BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037713
(610 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O23266|PP308_ARATH Pentatricopeptide repeat-containing protein At4g14050,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2
SV=3
Length = 612
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/612 (67%), Positives = 510/612 (83%), Gaps = 2/612 (0%)
Query: 1 MQISHYLHRLRVCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHL 60
M I HYLH+L++CAR++ T K LHA I+KLG+ Q PL NTL++ YGKC +A +
Sbjct: 1 MLIPHYLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQV 60
Query: 61 LEEMPQRDHVSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGA 120
+EMP RDH++WAS+LTA NQANL KT+S+FS++ + L+PD FVF++LVKAC +LG+
Sbjct: 61 FDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGS 120
Query: 121 TRLGKQVHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSA 180
G+QVH F++S + +D+VVKSSLVDMYAKCGL N+A+AVFDSI++KN++SWTAM+S
Sbjct: 121 IDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSG 180
Query: 181 YARSGRKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLV 240
YA+SGRK++A+E+F PV+NL+ WTAL+SG VQS ++AF F EMRRE VDI+DPLV
Sbjct: 181 YAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLV 240
Query: 241 LSSIVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMR 300
LSSIVGACAN A G+Q+HGLVIALG++SC+FISNA++DMYAKCSD+IAAKDIF RMR
Sbjct: 241 LSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMR 300
Query: 301 RKDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRK 360
+DVVSWTS+IVG AQHGQAE+ LALYD+MVS GVKPNEVTFVGLIYACSHVG V KGR+
Sbjct: 301 HRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRE 360
Query: 361 LFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKHH 420
LF+SM +DYGI PSLQHYTCLLDLL RSG LDEAENLI MPF PDEPTWAALLSACK
Sbjct: 361 LFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQ 420
Query: 421 RNTEMGTRVANHLL-SLKPEDPSSYILLSNVYASAAMWQHVSKVRKLMSVMEVKKEPGYS 479
+MG R+A+HL+ S K +DPS+YILLSN+YASA++W VS+ R+ + MEV+K+PG+S
Sbjct: 421 GRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHS 480
Query: 480 YIEFGKGSHIFYAGETSHPLKDEIFELLTELDAEMK-RRGYVPDTSSVLHDMEQKEKERQ 538
+E K + +FYAGETSHPLK++IF LL +L+ EM+ R GYVPDTS +LHDM+++EKE+
Sbjct: 481 SVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKL 540
Query: 539 LFWHSERLAVAYGLLKSVPGTVLRVVKNLRVCGDCHIVMKMISRITKREIVVRDATRYHH 598
LFWHSER AVAYGLLK+VPGT +R+VKNLRVCGDCH+V+K IS IT+REI+VRDATRYHH
Sbjct: 541 LFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHH 600
Query: 599 FKDGKCSCNDFW 610
FK GKCSCNDFW
Sbjct: 601 FKGGKCSCNDFW 612
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 474 bits (1219), Expect = e-132, Method: Compositional matrix adjust.
Identities = 233/569 (40%), Positives = 342/569 (60%), Gaps = 10/569 (1%)
Query: 42 NTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQANLPQKTISIFSTMLALDKL 101
N L+ + K + A + M RD VSW +I+T Y Q+ + +F
Sbjct: 223 NCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE------- 275
Query: 102 QPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARA 161
P VF G + R+ ++ F P ++V ++++ Y + A+
Sbjct: 276 SPVQDVFTWTAMVSGYI-QNRMVEEARELFDKMPE-RNEVSWNAMLAGYVQGERMEMAKE 333
Query: 162 VFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDA 221
+FD + +N +W M++ YA+ G+ +A +F++ P R+ W A+++G QS + +A
Sbjct: 334 LFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEA 393
Query: 222 FYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVD 281
F++M REG + + SS + CA+ LELGKQ+HG ++ GYE+ F+ NA++
Sbjct: 394 LRLFVQMEREGGRL-NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLL 452
Query: 282 MYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVT 341
MY KC I A D+F M KD+VSW ++I G ++HG E L ++ M G+KP++ T
Sbjct: 453 MYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDAT 512
Query: 342 FVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAM 401
V ++ ACSH GLV KGR+ F +M +DYG+ P+ QHY C++DLL R+G L++A NL+K M
Sbjct: 513 MVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNM 572
Query: 402 PFEPDEPTWAALLSACKHHRNTEMGTRVANHLLSLKPEDPSSYILLSNVYASAAMWQHVS 461
PFEPD W LL A + H NTE+ A+ + +++PE+ Y+LLSN+YAS+ W V
Sbjct: 573 PFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVG 632
Query: 462 KVRKLMSVMEVKKEPGYSYIEFGKGSHIFYAGETSHPLKDEIFELLTELDAEMKRRGYVP 521
K+R M VKK PGYS+IE +H F G+ HP KDEIF L ELD MK+ GYV
Sbjct: 633 KLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVS 692
Query: 522 DTSSVLHDMEQKEKERQLFWHSERLAVAYGLLKSVPGTVLRVVKNLRVCGDCHIVMKMIS 581
TS VLHD+E++EKER + +HSERLAVAYG+++ G +RV+KNLRVC DCH +K ++
Sbjct: 693 KTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMA 752
Query: 582 RITKREIVVRDATRYHHFKDGKCSCNDFW 610
RIT R I++RD R+HHFKDG CSC D+W
Sbjct: 753 RITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 168/396 (42%), Gaps = 61/396 (15%)
Query: 42 NTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQANLPQKTISIFSTMLALDKL 101
N +I Y + + A L +EMP+RD VSW ++ Y + K +F M
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIM------ 152
Query: 102 QPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARA 161
P+ D ++++ YA+ G ++AR+
Sbjct: 153 -PER---------------------------------DVCSWNTMLSGYAQNGCVDDARS 178
Query: 162 VFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDA 221
VFD + KN VSW A+LSAY ++ + ++A +F+ L W L+ G V+ + ++A
Sbjct: 179 VFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEA 238
Query: 222 FYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVD 281
F M ++ D + ++I+ A ++ +Q+ +F A+V
Sbjct: 239 RQFFDSM-----NVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQD----VFTWTAMVS 289
Query: 282 MYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVT 341
Y + + A+++F +M ++ VSW +++ G Q + E L+D M V T
Sbjct: 290 GYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVS----T 345
Query: 342 FVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAM 401
+ +I + G + + + LF M + ++ + ++ S+SGH EA L M
Sbjct: 346 WNTMITGYAQCGKISEAKNLFDKMPKRDPVS-----WAAMIAGYSQSGHSFEALRLFVQM 400
Query: 402 PFEP---DEPTWAALLSACKHHRNTEMGTRVANHLL 434
E + ++++ LS C E+G ++ L+
Sbjct: 401 EREGGRLNRSSFSSALSTCADVVALELGKQLHGRLV 436
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 120/322 (37%), Gaps = 84/322 (26%)
Query: 174 WTAMLSAYARSGRKKDAMEI-------------------------------FEQAPVRNL 202
W +S+Y R+GR +A+ + F++ P R+L
Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDL 126
Query: 203 FLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACAN-----FAVLELG 257
W ++ G V++RN A F M V + ++ C + F +
Sbjct: 127 VSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK 186
Query: 258 KQIHGLVIALGY-------ESCLFIS----------NAIVDMYAKCSDIIAAKDIFGRMR 300
+ + Y E+C+ N ++ + K I+ A+ F M
Sbjct: 187 NDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMN 246
Query: 301 RKDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRK 360
+DVVSW +II G AQ G+ +E L+DE V T+ ++ +V + R+
Sbjct: 247 VRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDV----FTWTAMVSGYIQNRMVEEARE 302
Query: 361 LFKSMIED------------------------YGITP--SLQHYTCLLDLLSRSGHLDEA 394
LF M E + + P ++ + ++ ++ G + EA
Sbjct: 303 LFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEA 362
Query: 395 ENLIKAMPFEPDEPTWAALLSA 416
+NL MP + D +WAA+++
Sbjct: 363 KNLFDKMP-KRDPVSWAAMIAG 383
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 116/269 (43%), Gaps = 21/269 (7%)
Query: 4 SHYLHRLRVCARHQIALTV-KTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLE 62
S + L CA +AL + K LH +++K G + N L+ Y KC ++ A+ L +
Sbjct: 410 SSFSSALSTCA-DVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFK 468
Query: 63 EMPQRDHVSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATR 122
EM +D VSW +++ Y++ + + F +M + L+PD +++ AC G
Sbjct: 469 EMAGKDIVSWNTMIAGYSRHGFGEVALRFFESM-KREGLKPDDATMVAVLSACSHTGLVD 527
Query: 123 LGKQVHACFVLSPFCDDDVVKSS-----LVDMYAKCGLPNNARAVFDSIKLK-NSVSWTA 176
G+Q + + D V+ +S +VD+ + GL +A + ++ + ++ W
Sbjct: 528 KGRQ----YFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGT 583
Query: 177 MLSAYARSGR----KKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREG 232
+L A G + A +IF P N ++ L + S D + MR +G
Sbjct: 584 LLGASRVHGNTELAETAADKIFAMEP-ENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKG 642
Query: 233 VDIVDPLVLSSIVGACANFAVLELGKQIH 261
V V I F+V G + H
Sbjct: 643 VKKVPGYSWIEIQNKTHTFSV---GDEFH 668
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 466 bits (1199), Expect = e-130, Method: Compositional matrix adjust.
Identities = 252/619 (40%), Positives = 345/619 (55%), Gaps = 65/619 (10%)
Query: 23 KTLHAQIIKLGLHQY----GPL---------------------------PNTLIDAYGKC 51
K +H Q+IKLG Y PL N+L+ C
Sbjct: 159 KQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLAC 218
Query: 52 DLVQYAHHLLEEMPQRDHVSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASL 111
+++ A L M ++D VSWA+++ Q L ++ I F M + L+ D + F S+
Sbjct: 219 GMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREM-KVQGLKMDQYPFGSV 276
Query: 112 VKACGSLGATRLGKQVHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNS 171
+ ACG LGA GKQ+HAC + + F D V S+L+DMY KC + A+ VFD +K KN
Sbjct: 277 LPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNV 336
Query: 172 VSWTAMLSAYARSGRKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRRE 231
VS WTA+V G Q+ +A F++M+R
Sbjct: 337 VS-------------------------------WTAMVVGYGQTGRAEEAVKIFLDMQRS 365
Query: 232 GVDIVDPLVLSSIVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIA 291
G+D D L + ACAN + LE G Q HG I G + +SN++V +Y KC DI
Sbjct: 366 GID-PDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDD 424
Query: 292 AKDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSH 351
+ +F M +D VSWT+++ AQ G+A ET+ L+D+MV G+KP+ VT G+I ACS
Sbjct: 425 STRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSR 484
Query: 352 VGLVGKGRKLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWA 411
GLV KG++ FK M +YGI PS+ HY+C++DL SRSG L+EA I MPF PD W
Sbjct: 485 AGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWT 544
Query: 412 ALLSACKHHRNTEMGTRVANHLLSLKPEDPSSYILLSNVYASAAMWQHVSKVRKLMSVME 471
LLSAC++ N E+G A L+ L P P+ Y LLS++YAS W V+++R+ M
Sbjct: 545 TLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKN 604
Query: 472 VKKEPGYSYIEFGKGSHIFYAGETSHPLKDEIFELLTELDAEMKRRGYVPDTSSVLHDME 531
VKKEPG S+I++ H F A + S P D+I+ L EL+ ++ GY PDTS V HD+E
Sbjct: 605 VKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVE 664
Query: 532 QKEKERQLFWHSERLAVAYGLLKSVPGTVLRVVKNLRVCGDCHIVMKMISRITKREIVVR 591
+ K + L +HSERLA+A+GL+ G +RV KNLRVC DCH K IS +T REI+VR
Sbjct: 665 EAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVR 724
Query: 592 DATRYHHFKDGKCSCNDFW 610
DA R+H FKDG CSC DFW
Sbjct: 725 DAVRFHRFKDGTCSCGDFW 743
Score = 192 bits (488), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 196/379 (51%), Gaps = 12/379 (3%)
Query: 42 NTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQANLPQKTISIFSTMLALDKL 101
N L+ AY K L+ E++P RD V+W ++ Y+ + L + ++TM+
Sbjct: 76 NNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSA 135
Query: 102 QPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARA 161
+++K S G LGKQ+H + F +V S L+ MYA G ++A+
Sbjct: 136 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKK 195
Query: 162 VFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDA 221
VF + +N+V + +++ G +DA+++F + ++ W A++ GL Q+ +A
Sbjct: 196 VFYGLDDRNTVMYNSLMGGLLACGMIEDALQLF-RGMEKDSVSWAAMIKGLAQNGLAKEA 254
Query: 222 FYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVD 281
F EM+ +G+ + D S++ AC + GKQIH +I ++ +++ +A++D
Sbjct: 255 IECFREMKVQGLKM-DQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALID 313
Query: 282 MYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVT 341
MY KC + AK +F RM++K+VVSWT+++VG Q G+AEE + ++ +M +G+ P+ T
Sbjct: 314 MYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYT 373
Query: 342 FVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHY----TCLLDLLSRSGHLDEAENL 397
I AC++V + +G S IT L HY L+ L + G +D++ L
Sbjct: 374 LGQAISACANVSSLEEG-----SQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRL 428
Query: 398 IKAMPFEPDEPTWAALLSA 416
M D +W A++SA
Sbjct: 429 FNEMNVR-DAVSWTAMVSA 446
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 167/382 (43%), Gaps = 40/382 (10%)
Query: 108 FASLVKACGSLGA---TRLGKQVHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFD 164
++ +K C LGA +R K +H + + + + +++V YA AR VFD
Sbjct: 6 YSVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFD 65
Query: 165 SIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYS 224
I N SW +L AY+++G + FE+ P R+ W L+ G S A +
Sbjct: 66 RIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKA 125
Query: 225 FIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYA 284
+ M R+ + + L +++ ++ + LGKQIHG VI LG+ES L + + ++ MYA
Sbjct: 126 YNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYA 185
Query: 285 KCSDIIAAKDIF------------------------------GRMRRKDVVSWTSIIVGT 314
I AK +F R KD VSW ++I G
Sbjct: 186 NVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGL 245
Query: 315 AQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPS 374
AQ+G A+E + + EM G+K ++ F ++ AC +G + +G+++ +I
Sbjct: 246 AQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRT-NFQDH 304
Query: 375 LQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKHHRNTEMGTRVANHLL 434
+ + L+D+ + L A+ + M + + +W A++ E ++ L
Sbjct: 305 IYVGSALIDMYCKCKCLHYAKTVFDRMK-QKNVVSWTAMVVGYGQTGRAEEAVKI---FL 360
Query: 435 SLKPE--DPSSYILLSNVYASA 454
++ DP Y L + A A
Sbjct: 361 DMQRSGIDPDHYTLGQAISACA 382
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 462 bits (1188), Expect = e-129, Method: Compositional matrix adjust.
Identities = 243/624 (38%), Positives = 369/624 (59%), Gaps = 35/624 (5%)
Query: 21 TVKTLHAQIIKLGLHQYGPLPNTLIDAYGKC----------------DLVQY----AHHL 60
T K +H+ I+KLGL + N+L++ Y KC D+ + A H+
Sbjct: 164 TGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHM 223
Query: 61 -----------LEEMPQRDHVSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFA 109
E+M +RD V+W S+++ +NQ + + IFS ML L PD F A
Sbjct: 224 QVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLA 283
Query: 110 SLVKACGSLGATRLGKQVHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLK 169
S++ AC +L +GKQ+H+ V + F +V ++L+ MY++CG AR + + K
Sbjct: 284 SVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTK 343
Query: 170 NSV--SWTAMLSAYARSGRKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIE 227
+ +TA+L Y + G A IF R++ WTA++ G Q + +A F
Sbjct: 344 DLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRS 403
Query: 228 MRREGVDIVDPLVLSSIVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCS 287
M G + L++++ ++ A L GKQIHG + G + +SNA++ MYAK
Sbjct: 404 MVGGG-QRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAG 462
Query: 288 DIIAAKDIFGRMR-RKDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLI 346
+I +A F +R +D VSWTS+I+ AQHG AEE L L++ M+ G++P+ +T+VG+
Sbjct: 463 NITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVF 522
Query: 347 YACSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPD 406
AC+H GLV +GR+ F M + I P+L HY C++DL R+G L EA+ I+ MP EPD
Sbjct: 523 SACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPD 582
Query: 407 EPTWAALLSACKHHRNTEMGTRVANHLLSLKPEDPSSYILLSNVYASAAMWQHVSKVRKL 466
TW +LLSAC+ H+N ++G A LL L+PE+ +Y L+N+Y++ W+ +K+RK
Sbjct: 583 VVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKS 642
Query: 467 MSVMEVKKEPGYSYIEFGKGSHIFYAGETSHPLKDEIFELLTELDAEMKRRGYVPDTSSV 526
M VKKE G+S+IE H+F + +HP K+EI+ + ++ E+K+ GYVPDT+SV
Sbjct: 643 MKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASV 702
Query: 527 LHDMEQKEKERQLFWHSERLAVAYGLLKSVPGTVLRVVKNLRVCGDCHIVMKMISRITKR 586
LHD+E++ KE+ L HSE+LA+A+GL+ + T LR++KNLRVC DCH +K IS++ R
Sbjct: 703 LHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGR 762
Query: 587 EIVVRDATRYHHFKDGKCSCNDFW 610
EI+VRD TR+HHFKDG CSC D+W
Sbjct: 763 EIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 199 bits (505), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 132/517 (25%), Positives = 243/517 (47%), Gaps = 70/517 (13%)
Query: 20 LTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAY 79
T + +H ++IK GL L N L++ Y K +A L +EMP R SW ++L+AY
Sbjct: 31 FTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAY 90
Query: 80 NQA-----------NLPQKTISIFSTM-------------------LALDKLQPDHFVFA 109
++ LPQ+ ++TM + + ++P F
Sbjct: 91 SKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLT 150
Query: 110 SLVKACGSLGATRLGKQVHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLK 169
+++ + + GK+VH+ V + V +SL++MYAKCG P A+ VFD + ++
Sbjct: 151 NVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVR 210
Query: 170 NSVSWTAMLSAYARSGRKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMR 229
+ SW AM++ + + G+ AM FEQ R++ W +++SG Q ++ A F +M
Sbjct: 211 DISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKML 270
Query: 230 REGVDIVDPLVLSSIVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKC--- 286
R+ + D L+S++ ACAN L +GKQIH ++ G++ + NA++ MY++C
Sbjct: 271 RDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGV 330
Query: 287 ------------------------------SDIIAAKDIFGRMRRKDVVSWTSIIVGTAQ 316
D+ AK+IF ++ +DVV+WT++IVG Q
Sbjct: 331 ETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQ 390
Query: 317 HGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQ 376
HG E + L+ MV G +PN T ++ S + + G+++ S ++ G S+
Sbjct: 391 HGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKS-GEIYSVS 449
Query: 377 HYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKHHRNTEMGTRVANHLL-- 434
L+ + +++G++ A + E D +W +++ A H + E + +L
Sbjct: 450 VSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLME 509
Query: 435 SLKPEDPSSYILLSNVYASAAMWQHVSKVRKLMSVME 471
L+P+ +I V+++ V++ R+ +M+
Sbjct: 510 GLRPD----HITYVGVFSACTHAGLVNQGRQYFDMMK 542
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 146/350 (41%), Gaps = 81/350 (23%)
Query: 10 LRVCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEE------ 63
L CA + K +H+ I+ G G + N LI Y +C V+ A L+E+
Sbjct: 286 LSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDL 345
Query: 64 ---------------------------MPQRDHVSWASILTAYNQANLPQKTISIFSTML 96
+ RD V+W +++ Y Q + I++F +M+
Sbjct: 346 KIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMV 405
Query: 97 ALDKLQPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDDDVVKSSLVDMYAKCGLP 156
+ +P+ + A+++ SL + GKQ+H V S V ++L+ MYAK G
Sbjct: 406 GGGQ-RPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNI 464
Query: 157 NNARAVFDSIKL-KNSVSWTAMLSAYARSGRKKDAMEIFEQAPVRNLFLWTALVSGLVQS 215
+A FD I+ +++VSWT+M+ A A+ G ++A+E+FE T L+ GL
Sbjct: 465 TSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFE----------TMLMEGLRP- 513
Query: 216 RNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQ-------IHGLVIALG 268
D + + AC + ++ G+Q + ++ L
Sbjct: 514 ---------------------DHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLS 552
Query: 269 YESCLFISNAIVDMYAKCSDIIAAKDIFGRMR-RKDVVSWTSIIVGTAQH 317
+ +C+ VD++ + + A++ +M DVV+W S++ H
Sbjct: 553 HYACM------VDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVH 596
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 455 bits (1171), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/569 (38%), Positives = 349/569 (61%), Gaps = 32/569 (5%)
Query: 42 NTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQANLPQKTISIFSTMLALDKL 101
N +++ Y + L++ A L +EM ++D SW +++T Y + + P++ + ++S M +
Sbjct: 155 NVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNS 214
Query: 102 QPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARA 161
+P+ F + V A ++ R GK++H V + D+V+ SSL+DMY KCG + AR
Sbjct: 215 RPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARN 274
Query: 162 VFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDA 221
+FD I K+ VSWT+M+ Y +S R ++ +F + + G + NE
Sbjct: 275 IFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSE------------LVGSCERPNE--- 319
Query: 222 FYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVD 281
Y+F + ++ ACA+ ELGKQ+HG + +G++ F S+++VD
Sbjct: 320 -YTF----------------AGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVD 362
Query: 282 MYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVT 341
MY KC +I +AK + + D+VSWTS+I G AQ+GQ +E L +D ++ +G KP+ VT
Sbjct: 363 MYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVT 422
Query: 342 FVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAM 401
FV ++ AC+H GLV KG + F S+ E + ++ + HYTCL+DLL+RSG ++ +++I M
Sbjct: 423 FVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEM 482
Query: 402 PFEPDEPTWAALLSACKHHRNTEMGTRVANHLLSLKPEDPSSYILLSNVYASAAMWQHVS 461
P +P + WA++L C + N ++ A L ++PE+P +Y+ ++N+YA+A W+
Sbjct: 483 PMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEG 542
Query: 462 KVRKLMSVMEVKKEPGYSYIEFGKGSHIFYAGETSHPLKDEIFELLTELDAEMKRRGYVP 521
K+RK M + V K PG S+ E + H+F A +TSHP+ ++I E L EL +MK GYVP
Sbjct: 543 KMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVP 602
Query: 522 DTSSVLHDMEQKEKERQLFWHSERLAVAYGLLKSVPGTVLRVVKNLRVCGDCHIVMKMIS 581
TS VLHD+E ++KE L +HSE+LAVA+ +L + GT ++V KNLR C DCH +K IS
Sbjct: 603 ATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFIS 662
Query: 582 RITKREIVVRDATRYHHFKDGKCSCNDFW 610
ITKR+I VRD+TR+H F++G+CSC D+W
Sbjct: 663 NITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 166 bits (420), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 181/340 (53%), Gaps = 4/340 (1%)
Query: 102 QPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARA 161
+P + +L++ C A GK+VH S F V+ + L+ MYAKCG +AR
Sbjct: 82 KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARK 141
Query: 162 VFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDA 221
VFD + ++ SW M++ YA G ++A ++F++ ++ + WTA+V+G V+ +A
Sbjct: 142 VFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEA 201
Query: 222 FYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVD 281
+ M+R + +S V A A + GK+IHG ++ G +S + ++++D
Sbjct: 202 LVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMD 261
Query: 282 MYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVT 341
MY KC I A++IF ++ KDVVSWTS+I + + E +L+ E+V + +PNE T
Sbjct: 262 MYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYT 321
Query: 342 FVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAM 401
F G++ AC+ + G+++ M G P + L+D+ ++ G+++ A++++
Sbjct: 322 FAGVLNACADLTTEELGKQVHGYMTR-VGFDPYSFASSSLVDMYTKCGNIESAKHVVDGC 380
Query: 402 PFEPDEPTWAALLSACKHHRNTEMGTRVANHLL--SLKPE 439
P +PD +W +L+ C + + + + LL KP+
Sbjct: 381 P-KPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPD 419
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 162/359 (45%), Gaps = 51/359 (14%)
Query: 23 KTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQA 82
K +H I++ GL L ++L+D YGKC + A ++ +++ ++D VSW S++ Y ++
Sbjct: 238 KEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKS 297
Query: 83 NLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDDDVV 142
+ ++ S+FS ++ + +P+ + FA ++ AC L LGKQVH F
Sbjct: 298 SRWREGFSLFSELVGSCE-RPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFA 356
Query: 143 KSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVRNL 202
SSLVDMY KCG +A+ V D + VSWT+++ A++G+ +A++ F+
Sbjct: 357 SSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFD------- 409
Query: 203 FLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQI-- 260
L SG D + +++ AC + ++E G +
Sbjct: 410 ---LLLKSGTKP----------------------DHVTFVNVLSACTHAGLVEKGLEFFY 444
Query: 261 -----HGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRK-DVVSWTSIIVGT 314
H L + +CL VD+ A+ K + M K W S++ G
Sbjct: 445 SITEKHRLSHTSDHYTCL------VDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGC 498
Query: 315 AQHGQAEETLALYDEMVSAGVKP-NEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGIT 372
+ +G + E+ ++P N VT+V + + G + K+ K M ++ G+T
Sbjct: 499 STYGNIDLAEEAAQELFK--IEPENPVTYVTMANIYAAAGKWEEEGKMRKRM-QEIGVT 554
Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 13/198 (6%)
Query: 10 LRVCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDH 69
L CA K +H + ++G Y ++L+D Y KC ++ A H+++ P+ D
Sbjct: 326 LNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDL 385
Query: 70 VSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHA 129
VSW S++ Q P + + F +L +PDH F +++ AC G G +
Sbjct: 386 VSWTSLIGGCAQNGQPDEALKYFDLLLK-SGTKPDHVTFVNVLSACTHAGLVEKGLEFFY 444
Query: 130 CFV----LSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNS-VSWTAMLSAYARS 184
LS D + LVD+ A+ G ++V + +K S W ++L +
Sbjct: 445 SITEKHRLSHTSDH---YTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTY 501
Query: 185 GR----KKDAMEIFEQAP 198
G ++ A E+F+ P
Sbjct: 502 GNIDLAEEAAQELFKIEP 519
Score = 34.7 bits (78), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 329 EMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCLLDLLSRS 388
+++ KP T+ LI CS + +G+K+ + I G P + + LL + ++
Sbjct: 75 QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEH-IRTSGFVPGIVIWNRLLRMYAKC 133
Query: 389 GHLDEAENLIKAMPFEPDEPTWAALLSA 416
G L +A + MP D +W +++
Sbjct: 134 GSLVDARKVFDEMP-NRDLCSWNVMVNG 160
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 454 bits (1169), Expect = e-127, Method: Compositional matrix adjust.
Identities = 225/601 (37%), Positives = 354/601 (58%), Gaps = 18/601 (2%)
Query: 16 HQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASI 75
H +A + TL ++ G +D Y C + YA ++ +EM RD V+W ++
Sbjct: 134 HGVAFKIATLCDPFVETGF----------MDMYASCGRINYARNVFDEMSHRDVVTWNTM 183
Query: 76 LTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHACFVLSP 135
+ Y + L + +F M + PD + ++V ACG G R + ++ + +
Sbjct: 184 IERYCRFGLVDEAFKLFEEMKD-SNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEND 242
Query: 136 FCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFE 195
D + ++LV MYA G + AR F + ++N TAM+S Y++ GR DA IF+
Sbjct: 243 VRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFD 302
Query: 196 QAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLE 255
Q ++L WT ++S V+S +A F EM G+ D + + S++ ACAN +L+
Sbjct: 303 QTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIK-PDVVSMFSVISACANLGILD 361
Query: 256 LGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTA 315
K +H + G ES L I+NA+++MYAKC + A +D+F +M R++VVSW+S+I +
Sbjct: 362 KAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALS 421
Query: 316 QHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSL 375
HG+A + L+L+ M V+PNEVTFVG++Y CSH GLV +G+K+F SM ++Y ITP L
Sbjct: 422 MHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKL 481
Query: 376 QHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKHHRNTEMGTRVANHLLS 435
+HY C++DL R+ L EA +I++MP + W +L+SAC+ H E+G A +L
Sbjct: 482 EHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILE 541
Query: 436 LKPEDPSSYILLSNVYASAAMWQHVSKVRKLMSVMEVKKEPGYSYIEFGKGSHIFYAGET 495
L+P+ + +L+SN+YA W+ V +R++M V KE G S I+ SH F G+
Sbjct: 542 LEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDK 601
Query: 496 SHPLKDEIFELLTELDAEMKRRGYVPDTSSVLHDMEQKEKERQLFWHSERLAVAYGLLKS 555
H +EI+ L E+ +++K GYVPD SVL D+E++EK+ + WHSE+LA+ +GL+
Sbjct: 602 RHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNE 661
Query: 556 VPGT------VLRVVKNLRVCGDCHIVMKMISRITKREIVVRDATRYHHFKDGKCSCNDF 609
V+R+VKNLRVC DCH+ K++S++ +REI+VRD TR+H +K+G CSC D+
Sbjct: 662 EKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDY 721
Query: 610 W 610
W
Sbjct: 722 W 722
Score = 139 bits (350), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 186/373 (49%), Gaps = 19/373 (5%)
Query: 56 YAHHLLEEMPQR-DHVSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKA 114
YA ++ +P + + + L ++++ P+ TI + + + + D F F ++KA
Sbjct: 62 YALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGG-RLDQFSFLPILKA 120
Query: 115 CGSLGATRLGKQVHA-CFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVS 173
+ A G ++H F ++ CD V++ +DMYA CG N AR VFD + ++ V+
Sbjct: 121 VSKVSALFEGMELHGVAFKIATLCDP-FVETGFMDMYASCGRINYARNVFDEMSHRDVVT 179
Query: 174 WTAMLSAYARSGRKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEID------AFYSFIE 227
W M+ Y R G +A ++FE+ N+ ++ +V + A Y F+
Sbjct: 180 WNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFL- 238
Query: 228 MRREGVDIVDPLVLSSIVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCS 287
E +D +L+++V A +++ ++ + LF+S A+V Y+KC
Sbjct: 239 --IENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRN----LFVSTAMVSGYSKCG 292
Query: 288 DIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIY 347
+ A+ IF + +KD+V WT++I + +E L +++EM +G+KP+ V+ +I
Sbjct: 293 RLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVIS 352
Query: 348 ACSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDE 407
AC+++G++ K K S I G+ L L+++ ++ G LD ++ + MP +
Sbjct: 353 ACANLGILDKA-KWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNV 410
Query: 408 PTWAALLSACKHH 420
+W+++++A H
Sbjct: 411 VSWSSMINALSMH 423
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 84/176 (47%), Gaps = 9/176 (5%)
Query: 10 LRVCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDH 69
+ CA I K +H+ I GL + N LI+ Y KC + + E+MP+R+
Sbjct: 351 ISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNV 410
Query: 70 VSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHA 129
VSW+S++ A + +S+F+ M + ++P+ F ++ C G GK++ A
Sbjct: 411 VSWSSMINALSMHGEASDALSLFARM-KQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFA 469
Query: 130 C----FVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKL-KNSVSWTAMLSA 180
+ ++P + +VD++ + L A V +S+ + N V W +++SA
Sbjct: 470 SMTDEYNITPKLEH---YGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSA 522
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 449 bits (1155), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/588 (39%), Positives = 350/588 (59%), Gaps = 34/588 (5%)
Query: 23 KTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQA 82
K +H IK+ + LIDAY + ++ A L E D V+W +++ Y Q+
Sbjct: 437 KQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQS 495
Query: 83 NLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDDDVV 142
+ KT+ +F+ M + + D F A++ K CG L A GKQVHA + S + D V
Sbjct: 496 HDGHKTLKLFALMHKQGE-RSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWV 554
Query: 143 KSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVRNL 202
S ++DMY KCG + A+ FDSI PV +
Sbjct: 555 SSGILDMYVKCGDMSAAQFAFDSI-------------------------------PVPDD 583
Query: 203 FLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIHG 262
WT ++SG +++ E AF+ F +MR GV + D ++++ A + LE G+QIH
Sbjct: 584 VAWTTMISGCIENGEEERAFHVFSQMRLMGV-LPDEFTIATLAKASSCLTALEQGRQIHA 642
Query: 263 LVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEE 322
+ L + F+ ++VDMYAKC I A +F R+ ++ +W +++VG AQHG+ +E
Sbjct: 643 NALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKE 702
Query: 323 TLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCLL 382
TL L+ +M S G+KP++VTF+G++ ACSH GLV + K +SM DYGI P ++HY+CL
Sbjct: 703 TLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLA 762
Query: 383 DLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKHHRNTEMGTRVANHLLSLKPEDPS 442
D L R+G + +AENLI++M E + LL+AC+ +TE G RVA LL L+P D S
Sbjct: 763 DALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSS 822
Query: 443 SYILLSNVYASAAMWQHVSKVRKLMSVMEVKKEPGYSYIEFGKGSHIFYAGETSHPLKDE 502
+Y+LLSN+YA+A+ W + R +M +VKK+PG+S+IE HIF + S+ +
Sbjct: 823 AYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTEL 882
Query: 503 IFELLTELDAEMKRRGYVPDTSSVLHDMEQKEKERQLFWHSERLAVAYGLLKSVPGTVLR 562
I+ + ++ ++K+ GYVP+T L D+E++EKER L++HSE+LAVA+GLL + P T +R
Sbjct: 883 IYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIR 942
Query: 563 VVKNLRVCGDCHIVMKMISRITKREIVVRDATRYHHFKDGKCSCNDFW 610
V+KNLRVCGDCH MK I+++ REIV+RDA R+H FKDG CSC D+W
Sbjct: 943 VIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 152 bits (385), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 119/459 (25%), Positives = 210/459 (45%), Gaps = 45/459 (9%)
Query: 23 KTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQA 82
+ +H +KLGL + N+LI+ Y K +A + + M +RD +SW S++ Q
Sbjct: 335 QQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQN 394
Query: 83 NLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSL-GATRLGKQVHACFVLSPFCDDDV 141
L + + +F +L L+PD + S++KA SL L KQVH
Sbjct: 395 GLEVEAVCLFMQLLRCG-LKPDQYTMTSVLKAASSLPEGLSLSKQVHV------------ 441
Query: 142 VKSSLVDMYAKCGLPNNARAVFDSIKLKN---SVSWTAMLSAYARSGRKKDAMEIFEQAP 198
+IK+ N S TA++ AY+R+ K+A +FE+
Sbjct: 442 ----------------------HAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHN 479
Query: 199 VRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGK 258
+L W A+++G QS + F M ++G + D L+++ C + GK
Sbjct: 480 F-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQG-ERSDDFTLATVFKTCGFLFAINQGK 537
Query: 259 QIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHG 318
Q+H I GY+ L++S+ I+DMY KC D+ AA+ F + D V+WT++I G ++G
Sbjct: 538 QVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENG 597
Query: 319 QAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHY 378
+ E ++ +M GV P+E T L A S + + +GR++ + ++ T
Sbjct: 598 EEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALK-LNCTNDPFVG 656
Query: 379 TCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKHHRNTEMGTRVANHL--LSL 436
T L+D+ ++ G +D+A L K + + W A+L H + ++ + L +
Sbjct: 657 TSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGI 715
Query: 437 KPEDPSSYILLSNVYASAAMWQHVSKVRKLMSVMEVKKE 475
KP+ + +LS S + + +R + +K E
Sbjct: 716 KPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPE 754
Score = 139 bits (349), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 198/440 (45%), Gaps = 53/440 (12%)
Query: 23 KTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQA 82
K HA+I+ + L N LI Y KC + YA + ++MP RD VSW SIL AY Q+
Sbjct: 59 KCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQS 118
Query: 83 NL-----PQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFC 137
+ Q+ +F +L D + + ++K C G + H
Sbjct: 119 SECVVENIQQAFLLFR-ILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLD 177
Query: 138 DDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEI---F 194
D+ V +LV++Y K G + +F+ + ++ V W ML AY G K++A+++ F
Sbjct: 178 GDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAF 237
Query: 195 EQA---PVRNLFLWTALVSGLVQSRNEIDAF--------YSFIEMRREGV---------- 233
+ P A +SG ++ +F S I R +G+
Sbjct: 238 HSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYS 297
Query: 234 -------DIV------DPLVLSSIVGACANFAVLELGKQIHGLVIALGYESCLFISNAIV 280
D+V D + ++ L LG+Q+H + + LG + L +SN+++
Sbjct: 298 ALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLI 357
Query: 281 DMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEV 340
+MY K A+ +F M +D++SW S+I G AQ+G E + L+ +++ G+KP++
Sbjct: 358 NMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQY 417
Query: 341 TFVGLIYACSHVGLVGKGRKLFKSM----IEDYGITPSLQHYTCLLDLLSRSGHLDEAEN 396
T ++ A S + +G L K + I+ ++ S T L+D SR+ + EAE
Sbjct: 418 TMTSVLKAASS---LPEGLSLSKQVHVHAIKINNVSDSFVS-TALIDAYSRNRCMKEAEI 473
Query: 397 LIKAMPFEPDEPTWAALLSA 416
L + F D W A+++
Sbjct: 474 LFERHNF--DLVAWNAMMAG 491
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/473 (21%), Positives = 203/473 (42%), Gaps = 48/473 (10%)
Query: 10 LRVCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDH 69
L++C ++ H K+GL + L++ Y K V+ L EEMP RD
Sbjct: 152 LKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDV 211
Query: 70 VSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACG---SLGATR---- 122
V W +L AY + ++ I + S+ L P+ L + G G +
Sbjct: 212 VLWNLMLKAYLEMGFKEEAIDL-SSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFAN 270
Query: 123 ----------------LGKQVHA--------CFVLSPFCDDDVVKSSLVDMYAKC----- 153
L + +H+ CF D + + + + M A
Sbjct: 271 GNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDS 330
Query: 154 ---GLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVRNLFLWTALVS 210
G + A+ + L +VS ++++ Y + + A +F+ R+L W ++++
Sbjct: 331 LALGQQVHCMALKLGLDLMLTVS-NSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIA 389
Query: 211 GLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAV-LELGKQIHGLVIALGY 269
G+ Q+ E++A F+++ R G+ D ++S++ A ++ L L KQ+H I +
Sbjct: 390 GIAQNGLEVEAVCLFMQLLRCGLK-PDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINN 448
Query: 270 ESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLALYDE 329
S F+S A++D Y++ + A+ +F R D+V+W +++ G Q +TL L+
Sbjct: 449 VSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFAL 507
Query: 330 MVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCLLDLLSRSG 389
M G + ++ T + C + + +G+++ I+ G L + +LD+ + G
Sbjct: 508 MHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKS-GYDLDLWVSSGILDMYVKCG 566
Query: 390 HLDEAENLIKAMPFEPDEPTWAALLSACKHHRNTEMGTRVANH--LLSLKPED 440
+ A+ ++P PD+ W ++S C + E V + L+ + P++
Sbjct: 567 DMSAAQFAFDSIPV-PDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDE 618
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 73/168 (43%), Gaps = 7/168 (4%)
Query: 254 LELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVG 313
L LGK H ++ F+ N ++ MY+KC + A+ +F +M +D+VSW SI+
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114
Query: 314 TAQHGQA-----EETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIED 368
AQ + ++ L+ + V + +T ++ C H G V F
Sbjct: 115 YAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASES-FHGYACK 173
Query: 369 YGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSA 416
G+ L+++ + G + E + L + MP+ D W +L A
Sbjct: 174 IGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLMLKA 220
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 446 bits (1147), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/623 (37%), Positives = 352/623 (56%), Gaps = 40/623 (6%)
Query: 25 LHAQIIKLGLHQYGPLPNTLIDAYGKC----DLVQYAHHLLEEMPQRDHVSWASILT--- 77
HA +K G + N L+ Y KC L+ A + +E+ ++D SW +++T
Sbjct: 171 FHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYV 230
Query: 78 ----------------------AYN-------QANLPQKTISIFSTMLALDKLQPDHFVF 108
AYN Q+ + + M++ ++ D F +
Sbjct: 231 KNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVS-SGIELDEFTY 289
Query: 109 ASLVKACGSLGATRLGKQVHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKL 168
S+++AC + G +LGKQVHA +VL +SLV +Y KCG + ARA+F+ +
Sbjct: 290 PSVIRACATAGLLQLGKQVHA-YVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPA 348
Query: 169 KNSVSWTAMLSAYARSGRKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEM 228
K+ VSW A+LS Y SG +A IF++ +N+ W ++SGL ++ + F M
Sbjct: 349 KDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCM 408
Query: 229 RREGVDIVDPLVLSSIVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSD 288
+REG + D S + +CA G+Q H ++ +G++S L NA++ MYAKC
Sbjct: 409 KREGFEPCD-YAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGV 467
Query: 289 IIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYA 348
+ A+ +F M D VSW ++I QHG E + +Y+EM+ G++P+ +T + ++ A
Sbjct: 468 VEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTA 527
Query: 349 CSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEP 408
CSH GLV +GRK F SM Y I P HY L+DLL RSG +AE++I+++PF+P
Sbjct: 528 CSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAE 587
Query: 409 TWAALLSACKHHRNTEMGTRVANHLLSLKPEDPSSYILLSNVYASAAMWQHVSKVRKLMS 468
W ALLS C+ H N E+G A+ L L PE +Y+LLSN++A+ W+ V++VRKLM
Sbjct: 588 IWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMR 647
Query: 469 VMEVKKEPGYSYIEFGKGSHIFYAGETSHPLKDEIFELLTELDAEMKRRGYVPDTSSVLH 528
VKKE S+IE H F +TSHP + ++ L +L EM+R GYVPDTS VLH
Sbjct: 648 DRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLH 707
Query: 529 DMEQK-EKERQLFWHSERLAVAYGLLKSVPGTVLRVVKNLRVCGDCHIVMKMISRITKRE 587
D+E KE L HSE++AVA+GL+K PGT +R+ KNLR CGDCH + +S + +R+
Sbjct: 708 DVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRD 767
Query: 588 IVVRDATRYHHFKDGKCSCNDFW 610
I++RD R+HHF++G+CSC +FW
Sbjct: 768 IILRDRKRFHHFRNGECSCGNFW 790
Score = 156 bits (394), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 138/543 (25%), Positives = 228/543 (41%), Gaps = 83/543 (15%)
Query: 4 SHYLHRLRVCA--RHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLL 61
+ Y LR+C R + +H II G + N LID Y K + YA L
Sbjct: 13 NRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLF 72
Query: 62 EEMPQ---------------------------------RDHVSWASILTAYNQANLPQKT 88
+E+ + RD V + +++T ++ N
Sbjct: 73 DEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSA 132
Query: 89 ISIFSTMLALDKLQPDHFVFASLVKACGSLG-ATRLGKQVHACFVLSPFCDDDVVKSSLV 147
I++F M + +PD+F FAS++ + + Q HA + S V ++LV
Sbjct: 133 INLFCKM-KHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALV 191
Query: 148 DMYAKCG----LPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVR-NL 202
+Y+KC L ++AR VFD I K+ SWT M++ Y ++G E+ E L
Sbjct: 192 SVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKL 251
Query: 203 FLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIHG 262
+ A++SG V +A M G+++ D S++ ACA +L+LGKQ+H
Sbjct: 252 VAYNAMISGYVNRGFYQEALEMVRRMVSSGIEL-DEFTYPSVIRACATAGLLQLGKQVHA 310
Query: 263 LVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSI------------ 310
V+ S F N++V +Y KC A+ IF +M KD+VSW ++
Sbjct: 311 YVLRREDFSFHF-DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGE 369
Query: 311 -------------------IVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSH 351
I G A++G EE L L+ M G +P + F G I +C+
Sbjct: 370 AKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAV 429
Query: 352 VGLVGKGRKLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWA 411
+G G++ +++ G SL L+ + ++ G ++EA + + MP D +W
Sbjct: 430 LGAYCNGQQYHAQLLK-IGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC-LDSVSWN 487
Query: 412 ALLSACKHHRNTEMGTRVANHLL--SLKPEDPSSYILLSNVYASAAMWQHVSKVRKLMSV 469
AL++A H + V +L ++P+ I L V + + V + RK
Sbjct: 488 ALIAALGQHGHGAEAVDVYEEMLKKGIRPDR----ITLLTVLTACSHAGLVDQGRKYFDS 543
Query: 470 MEV 472
ME
Sbjct: 544 MET 546
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 445 bits (1145), Expect = e-124, Method: Compositional matrix adjust.
Identities = 217/589 (36%), Positives = 348/589 (59%), Gaps = 2/589 (0%)
Query: 23 KTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQA 82
++LH +K + + N+LI Y C + A + + ++D VSW S++ + Q
Sbjct: 151 QSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQK 210
Query: 83 NLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDDDVV 142
P K + +F M + D ++ H ++ AC + G+QV + + + +
Sbjct: 211 GSPDKALELFKKMESED-VKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTL 269
Query: 143 KSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVRNL 202
++++DMY KCG +A+ +FD+++ K++V+WT ML YA S + A E+ P +++
Sbjct: 270 ANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDI 329
Query: 203 FLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIHG 262
W AL+S Q+ +A F E++ + ++ + L S + ACA LELG+ IH
Sbjct: 330 VAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHS 389
Query: 263 LVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEE 322
+ G +++A++ MY+KC D+ ++++F + ++DV W+++I G A HG E
Sbjct: 390 YIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNE 449
Query: 323 TLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCLL 382
+ ++ +M A VKPN VTF + ACSH GLV + LF M +YGI P +HY C++
Sbjct: 450 AVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIV 509
Query: 383 DLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKHHRNTEMGTRVANHLLSLKPEDPS 442
D+L RSG+L++A I+AMP P W ALL ACK H N + LL L+P +
Sbjct: 510 DVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDG 569
Query: 443 SYILLSNVYASAAMWQHVSKVRKLMSVMEVKKEPGYSYIEFGKGSHIFYAGETSHPLKDE 502
+++LLSN+YA W++VS++RK M V +KKEPG S IE H F +G+ +HP+ ++
Sbjct: 570 AHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEK 629
Query: 503 IFELLTELDAEMKRRGYVPDTSSVLHDMEQKE-KERQLFWHSERLAVAYGLLKSVPGTVL 561
++ L E+ ++K GY P+ S VL +E++E KE+ L HSE+LA+ YGL+ + V+
Sbjct: 630 VYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVI 689
Query: 562 RVVKNLRVCGDCHIVMKMISRITKREIVVRDATRYHHFKDGKCSCNDFW 610
RV+KNLRVCGDCH V K+IS++ REI+VRD R+HHF++G+CSCNDFW
Sbjct: 690 RVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/442 (24%), Positives = 193/442 (43%), Gaps = 86/442 (19%)
Query: 22 VKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDL-----------VQYAHHLLEEMPQRDHV 70
+K H +I+ G T D Y L ++YA + +E+P+ +
Sbjct: 46 LKQTHGHMIRTG---------TFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSF 96
Query: 71 SWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHAC 130
+W +++ AY P +I F M++ + P+ + F L+KA + + LG+ +H
Sbjct: 97 AWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGM 156
Query: 131 FVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDA 190
V S D V +SL+ Y CG ++A VF +IK K+ VSW +M++ + + G A
Sbjct: 157 AVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKA 216
Query: 191 MEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACAN 250
+E+F++ M E V + + ++ ACA
Sbjct: 217 LELFKK-------------------------------MESEDVK-ASHVTMVGVLSACAK 244
Query: 251 FAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSI 310
LE G+Q+ + L ++NA++DMY KC I AK +F M KD V+WT++
Sbjct: 245 IRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTM 304
Query: 311 IVGTA-------------------------------QHGQAEETLALYDEM-VSAGVKPN 338
+ G A Q+G+ E L ++ E+ + +K N
Sbjct: 305 LDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLN 364
Query: 339 EVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLI 398
++T V + AC+ VG + GR + S I+ +GI + + L+ + S+ G L+++ +
Sbjct: 365 QITLVSTLSACAQVGALELGRWI-HSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVF 423
Query: 399 KAMPFEPDEPTWAALLSACKHH 420
++ + D W+A++ H
Sbjct: 424 NSVE-KRDVFVWSAMIGGLAMH 444
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 127/244 (52%), Gaps = 2/244 (0%)
Query: 190 AMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACA 249
A ++F++ P N F W L+ + + + ++F++M E + ++ A A
Sbjct: 83 ARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAA 142
Query: 250 NFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTS 309
+ L LG+ +HG+ + S +F++N+++ Y C D+ +A +F ++ KDVVSW S
Sbjct: 143 EVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNS 202
Query: 310 IIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDY 369
+I G Q G ++ L L+ +M S VK + VT VG++ AC+ + + GR++ S IE+
Sbjct: 203 MINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVC-SYIEEN 261
Query: 370 GITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKHHRNTEMGTRV 429
+ +L +LD+ ++ G +++A+ L AM E D TW +L + E V
Sbjct: 262 RVNVNLTLANAMLDMYTKCGSIEDAKRLFDAME-EKDNVTWTTMLDGYAISEDYEAAREV 320
Query: 430 ANHL 433
N +
Sbjct: 321 LNSM 324
Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 77/176 (43%), Gaps = 9/176 (5%)
Query: 10 LRVCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDH 69
L CA+ + +H+ I K G+ + + LI Y KC ++ + + + +RD
Sbjct: 372 LSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDV 431
Query: 70 VSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLG----ATRLGK 125
W++++ + + +F M + ++P+ F ++ AC G A L
Sbjct: 432 FVWSAMIGGLAMHGCGNEAVDMFYKMQEAN-VKPNGVTFTNVFCACSHTGLVDEAESLFH 490
Query: 126 QVHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVS-WTAMLSA 180
Q+ + + + P ++ + +VD+ + G A +++ + S S W A+L A
Sbjct: 491 QMESNYGIVP---EEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGA 543
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 442 bits (1138), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/603 (38%), Positives = 344/603 (57%), Gaps = 37/603 (6%)
Query: 10 LRVCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDH 69
L+ C R + +H+QIIK + + LID Y K + A +L +D
Sbjct: 497 LKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDV 556
Query: 70 VSWASILTAYNQANLPQKTISIFSTMLALDK-LQPDHFVFASLVKACGSLGATRLGKQVH 128
VSW +++ Y Q N K ++ F ML D+ ++ D + V AC L A + G+Q+H
Sbjct: 557 VSWTTMIAGYTQYNFDDKALTTFRQML--DRGIRSDEVGLTNAVSACAGLQALKEGQQIH 614
Query: 129 ACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKK 188
A +S F D +++LV +Y++C G+ +
Sbjct: 615 AQACVSGFSSDLPFQNALVTLYSRC-------------------------------GKIE 643
Query: 189 DAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGAC 248
++ FEQ + W ALVSG QS N +A F+ M REG+D + S V A
Sbjct: 644 ESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGID-NNNFTFGSAVKAA 702
Query: 249 ANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWT 308
+ A ++ GKQ+H ++ GY+S + NA++ MYAKC I A+ F + K+ VSW
Sbjct: 703 SETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWN 762
Query: 309 SIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIED 368
+II ++HG E L +D+M+ + V+PN VT VG++ ACSH+GLV KG F+SM +
Sbjct: 763 AIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSE 822
Query: 369 YGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKHHRNTEMGTR 428
YG++P +HY C++D+L+R+G L A+ I+ MP +PD W LLSAC H+N E+G
Sbjct: 823 YGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEF 882
Query: 429 VANHLLSLKPEDPSSYILLSNVYASAAMWQHVSKVRKLMSVMEVKKEPGYSYIEFGKGSH 488
A+HLL L+PED ++Y+LLSN+YA + W R+ M VKKEPG S+IE H
Sbjct: 883 AAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIH 942
Query: 489 IFYAGETSHPLKDEIFELLTELDAEMKRRGYVPDTSSVLHDMEQKEKERQLFWHSERLAV 548
FY G+ +HPL DEI E +L GYV D S+L++++ ++K+ +F HSE+LA+
Sbjct: 943 SFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAI 1002
Query: 549 AYGLLKSVPGTV-LRVVKNLRVCGDCHIVMKMISRITKREIVVRDATRYHHFKDGKCSCN 607
++GLL S+P TV + V+KNLRVC DCH +K +S+++ REI+VRDA R+HHF+ G CSC
Sbjct: 1003 SFGLL-SLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCK 1061
Query: 608 DFW 610
D+W
Sbjct: 1062 DYW 1064
Score = 173 bits (438), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 216/447 (48%), Gaps = 69/447 (15%)
Query: 23 KTLHAQIIKLGLHQYGPLPNTLIDAY-GKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQ 81
+ LH+QI+KLGL G L L D Y K DL A + +EMP+R +W ++
Sbjct: 105 RKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG-AFKVFDEMPERTIFTWNKMIKELAS 163
Query: 82 ANLPQKTISIFSTMLALDKLQPDHFVFASLVKAC-GSLGATRLGKQVHACFVLSPFCDDD 140
NL + +F M++ + + P+ F+ +++AC G A + +Q+HA + D
Sbjct: 164 RNLIGEVFGLFVRMVS-ENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDST 222
Query: 141 VVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVR 200
VV + L+D+Y++ G + AR VFD ++LK+ S
Sbjct: 223 VVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSS--------------------------- 255
Query: 201 NLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQI 260
W A++SGL ++ E +A F +M G+ + P SS++ AC LE+G+Q+
Sbjct: 256 ----WVAMISGLSKNECEAEAIRLFCDMYVLGI-MPTPYAFSSVLSACKKIESLEIGEQL 310
Query: 261 HGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQA 320
HGLV+ LG+ S ++ NA+V +Y ++I+A+ IF M ++D V++ ++I G +Q G
Sbjct: 311 HGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYG 370
Query: 321 EETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLF----------KSMIE--- 367
E+ + L+ M G++P+ T L+ ACS G + +G++L + IE
Sbjct: 371 EKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGAL 430
Query: 368 --------------DYGITPSLQHYTCLLDLLSRSGHLDEAEN---LIKAMPFE---PDE 407
DY + +++ +L G LD+ N + + M E P++
Sbjct: 431 LNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQ 490
Query: 408 PTWAALLSACKHHRNTEMGTRVANHLL 434
T+ ++L C + E+G ++ + ++
Sbjct: 491 YTYPSILKTCIRLGDLELGEQIHSQII 517
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 190/424 (44%), Gaps = 43/424 (10%)
Query: 10 LRVCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDH 69
L C + + + LH ++KLG + N L+ Y + A H+ M QRD
Sbjct: 295 LSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDA 354
Query: 70 VSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHA 129
V++ +++ +Q +K + +F M LD L+PD ASLV AC + G G+Q+HA
Sbjct: 355 VTYNTLINGLSQCGYGEKAMELFKRM-HLDGLEPDSNTLASLVVACSADGTLFRGQQLHA 413
Query: 130 CFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKD 189
F ++ ++ +L+++YAKC A F +++N V W ML AY ++
Sbjct: 414 YTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRN 473
Query: 190 AMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACA 249
+ IF Q + + + + SI+ C
Sbjct: 474 SFRIFRQMQIEEI--------------------------------VPNQYTYPSILKTCI 501
Query: 250 NFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTS 309
LELG+QIH +I ++ ++ + ++DMYAK + A DI R KDVVSWT+
Sbjct: 502 RLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTT 561
Query: 310 IIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDY 369
+I G Q+ ++ L + +M+ G++ +EV + AC+ + + +G+++
Sbjct: 562 MIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS- 620
Query: 370 GITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEP----DEPTWAALLSACKHHRNTEM 425
G + L L+ L SR G ++E+ + FE D W AL+S + N E
Sbjct: 621 GFSSDLPFQNALVTLYSRCGKIEES-----YLAFEQTEAGDNIAWNALVSGFQQSGNNEE 675
Query: 426 GTRV 429
RV
Sbjct: 676 ALRV 679
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 191/410 (46%), Gaps = 40/410 (9%)
Query: 10 LRVCARHQIAL-TVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRD 68
L C +A V+ +HA+I+ GL + N LID Y + V A + + + +D
Sbjct: 193 LEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKD 252
Query: 69 HVSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVH 128
H SW ++++ ++ + I +F M L + P + F+S++ AC + + +G+Q+H
Sbjct: 253 HSSWVAMISGLSKNECEAEAIRLFCDMYVLG-IMPTPYAFSSVLSACKKIESLEIGEQLH 311
Query: 129 ACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKK 188
+ F D V ++LV +Y G +A +F ++ +++V++ +++ ++ G +
Sbjct: 312 GLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGE 371
Query: 189 DAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGAC 248
AME+F++ M +G++ D L+S+V AC
Sbjct: 372 KAMELFKR-------------------------------MHLDGLE-PDSNTLASLVVAC 399
Query: 249 ANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWT 308
+ L G+Q+H LG+ S I A++++YAKC+DI A D F ++VV W
Sbjct: 400 SADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWN 459
Query: 309 SIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIED 368
++V + ++ +M + PN+ T+ ++ C +G + G ++ +I+
Sbjct: 460 VMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK- 518
Query: 369 YGITPSLQHYTC--LLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSA 416
L Y C L+D+ ++ G LD A +++ D +W +++
Sbjct: 519 --TNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFA-GKDVVSWTTMIAG 565
Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 1/163 (0%)
Query: 254 LELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVG 313
L+ G+++H ++ LG +S +S + D Y D+ A +F M + + +W +I
Sbjct: 101 LDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKE 160
Query: 314 TAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITP 373
A E L+ MVS V PNE TF G++ AC + + + I G+
Sbjct: 161 LASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRD 220
Query: 374 SLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSA 416
S L+DL SR+G +D A + + + D +W A++S
Sbjct: 221 STVVCNPLIDLYSRNGFVDLARRVFDGLRLK-DHSSWVAMISG 262
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 438 bits (1127), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/606 (39%), Positives = 343/606 (56%), Gaps = 42/606 (6%)
Query: 13 CARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDL---VQYAHHLLEEMPQRDH 69
CA + K LH+ I+ GL + +L+D Y KC V + + M
Sbjct: 279 CAELENLSLGKQLHSWAIRSGL--VDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSV 336
Query: 70 VSWASILTAY-NQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVH 128
+SW +++T Y NL + I++FS M+ ++P+HF F+S KACG+L R+GKQV
Sbjct: 337 MSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQV- 395
Query: 129 ACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKK 188
+ K GL +N+ + NSV +S + +S R +
Sbjct: 396 ------------------LGQAFKRGLASNS-------SVANSV-----ISMFVKSDRME 425
Query: 189 DAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGAC 248
DA FE +NL + + G ++ N AF E+ + V +S++
Sbjct: 426 DAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELG-VSAFTFASLLSGV 484
Query: 249 ANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWT 308
AN + G+QIH V+ LG + NA++ MY+KC I A +F M ++V+SWT
Sbjct: 485 ANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWT 544
Query: 309 SIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIED 368
S+I G A+HG A L +++M+ GVKPNEVT+V ++ ACSHVGLV +G + F SM ED
Sbjct: 545 SMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYED 604
Query: 369 YGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKHHRNTEMGTR 428
+ I P ++HY C++DLL R+G L +A I MPF+ D W L AC+ H NTE+G
Sbjct: 605 HKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKL 664
Query: 429 VANHLLSLKPEDPSSYILLSNVYASAAMWQHVSKVRKLMSVMEVKKEPGYSYIEFGKGSH 488
A +L L P +P++YI LSN+YA A W+ +++R+ M + KE G S+IE G H
Sbjct: 665 AARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIH 724
Query: 489 IFYAGETSHPLKDEIFELLTELDAEMKRRGYVPDTSSVLHDM----EQKEKERQLFWHSE 544
FY G+T+HP +I++ L L E+KR GYVPDT VLH + ++ EKER L+ HSE
Sbjct: 725 KFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSE 784
Query: 545 RLAVAYGLLKSVPGTVLRVVKNLRVCGDCHIVMKMISRITKREIVVRDATRYHHFKDGKC 604
++AVA+GL+ + +RV KNLRVCGDCH MK IS ++ REIV+RD R+HHFKDGKC
Sbjct: 785 KIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKC 844
Query: 605 SCNDFW 610
SCND+W
Sbjct: 845 SCNDYW 850
Score = 129 bits (325), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 193/434 (44%), Gaps = 47/434 (10%)
Query: 10 LRVCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEM---PQ 66
L+ C R + K +HA++I+ + L N+LI Y K A + E M +
Sbjct: 69 LKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGK 128
Query: 67 RDHVSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQ 126
RD VSW++++ Y I +F L L L P+ + + ++++AC + +G+
Sbjct: 129 RDVVSWSAMMACYGNNGRELDAIKVFVEFLELG-LVPNDYCYTAVIRACSNSDFVGVGRV 187
Query: 127 VHACFVLSPFCDDDV-VKSSLVDMYAKC-GLPNNARAVFDSIKLKNSVSWTAMLSAYARS 184
+ + + DV V SL+DM+ K NA VFD + N V+WT M++ +
Sbjct: 188 TLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQM 247
Query: 185 GRKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSI 244
G ++A+ F++M G + D LSS+
Sbjct: 248 GFPREAIRF-------------------------------FLDMVLSGFE-SDKFTLSSV 275
Query: 245 VGACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCS---DIIAAKDIFGRMRR 301
ACA L LGKQ+H I G + ++VDMYAKCS + + +F RM
Sbjct: 276 FSACAELENLSLGKQLHSWAIRSGLVD--DVECSLVDMYAKCSADGSVDDCRKVFDRMED 333
Query: 302 KDVVSWTSIIVGTAQHGQ-AEETLALYDEMVSAG-VKPNEVTFVGLIYACSHVGLVGKGR 359
V+SWT++I G ++ A E + L+ EM++ G V+PN TF AC ++ G+
Sbjct: 334 HSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGK 393
Query: 360 KLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKH 419
++ + G+ + ++ + +S +++A+ +++ E + ++ L
Sbjct: 394 QVLGQAFK-RGLASNSSVANSVISMFVKSDRMEDAQRAFESLS-EKNLVSYNTFLDGTCR 451
Query: 420 HRNTEMGTRVANHL 433
+ N E ++ + +
Sbjct: 452 NLNFEQAFKLLSEI 465
Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 159/343 (46%), Gaps = 41/343 (11%)
Query: 95 MLALDKLQP-DHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDDDVVKSSLVDMYAKC 153
++A D ++P D F+SL+K+C RLGK VHA + D V+ +SL+ +Y+K
Sbjct: 51 LMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKS 110
Query: 154 GLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVRNLFLWTALVSGLV 213
G S + +D E + R++ W+A+++
Sbjct: 111 G----------------------------DSAKAEDVFETMRRFGKRDVVSWSAMMACYG 142
Query: 214 QSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIHGLVIALG-YESC 272
+ E+DA F+E G+ + + ++++ AC+N + +G+ G ++ G +ES
Sbjct: 143 NNGRELDAIKVFVEFLELGL-VPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESD 201
Query: 273 LFISNAIVDMYAKCSDIIA-AKDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLALYDEMV 331
+ + +++DM+ K + A +F +M +VV+WT +I Q G E + + +MV
Sbjct: 202 VCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMV 261
Query: 332 SAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCLLDLLSR---S 388
+G + ++ T + AC+ + + G++L I G+ ++ L+D+ ++
Sbjct: 262 LSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRS-GLVDDVE--CSLVDMYAKCSAD 318
Query: 389 GHLDEAENLIKAMPFEPDEPTWAALLSACKHHRNTEMGTRVAN 431
G +D+ + M + +W AL++ + +N + T N
Sbjct: 319 GSVDDCRKVFDRME-DHSVMSWTALITG--YMKNCNLATEAIN 358
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 123/287 (42%), Gaps = 49/287 (17%)
Query: 228 MRREGVDIVDPLVLSSIVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCS 287
M R+G+ +D + SS++ +C LGK +H +I E + N+++ +Y+K
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 288 DIIAAKDIFGRMRR---KDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVG 344
D A+D+F MRR +DVVSW++++ +G+ + + ++ E + G+ PN+ +
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171
Query: 345 LIYACSHVGLVGKGR-------------------------------------KLFKSMIE 367
+I ACS+ VG GR K+F M E
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231
Query: 368 DYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAM---PFEPDEPTWAALLSACKHHRNTE 424
+T +L C+ + G EA M FE D+ T +++ SAC N
Sbjct: 232 LNVVTWTLMITRCM-----QMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLS 286
Query: 425 MGTRVANHLLSLKPEDPSSYILLSNVYASAAMWQHVSKVRKLMSVME 471
+G ++ + + D L+ ++YA + V RK+ ME
Sbjct: 287 LGKQLHSWAIRSGLVDDVECSLV-DMYAKCSADGSVDDCRKVFDRME 332
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 437 bits (1124), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/552 (40%), Positives = 331/552 (59%), Gaps = 35/552 (6%)
Query: 60 LLEEMPQRDHVSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLG 119
+ E MP++D VS+ +I+ Y Q+ + + + + M D L+PD F +S++
Sbjct: 198 VFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTD-LKPDSFTLSSVLPIFSEYV 256
Query: 120 ATRLGKQVHACFVLSPFCDDDV-VKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAML 178
GK++H +V+ D DV + SSLVDMYAK
Sbjct: 257 DVIKGKEIHG-YVIRKGIDSDVYIGSSLVDMYAK-------------------------- 289
Query: 179 SAYARSGRKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDP 238
S R +D+ +F + R+ W +LV+G VQ+ +A F +M V
Sbjct: 290 -----SARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVK-PGA 343
Query: 239 LVLSSIVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGR 298
+ SS++ ACA+ A L LGKQ+HG V+ G+ S +FI++A+VDMY+KC +I AA+ IF R
Sbjct: 344 VAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDR 403
Query: 299 MRRKDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKG 358
M D VSWT+II+G A HG E ++L++EM GVKPN+V FV ++ ACSHVGLV +
Sbjct: 404 MNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEA 463
Query: 359 RKLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACK 418
F SM + YG+ L+HY + DLL R+G L+EA N I M EP W+ LLS+C
Sbjct: 464 WGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCS 523
Query: 419 HHRNTEMGTRVANHLLSLKPEDPSSYILLSNVYASAAMWQHVSKVRKLMSVMEVKKEPGY 478
H+N E+ +VA + ++ E+ +Y+L+ N+YAS W+ ++K+R M ++K+P
Sbjct: 524 VHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPAC 583
Query: 479 SYIEFGKGSHIFYAGETSHPLKDEIFELLTELDAEMKRRGYVPDTSSVLHDMEQKEKERQ 538
S+IE +H F +G+ SHP D+I E L + +M++ GYV DTS VLHD++++ K
Sbjct: 584 SWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKREL 643
Query: 539 LFWHSERLAVAYGLLKSVPGTVLRVVKNLRVCGDCHIVMKMISRITKREIVVRDATRYHH 598
LF HSERLAVA+G++ + PGT +RV KN+R+C DCH+ +K IS+IT+REI+VRD +R+HH
Sbjct: 644 LFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHH 703
Query: 599 FKDGKCSCNDFW 610
F G CSC D+W
Sbjct: 704 FNRGNCSCGDYW 715
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 200/402 (49%), Gaps = 20/402 (4%)
Query: 23 KTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQA 82
K LHAQ I+ + + +I Y L+ A L + + ++W S++ +
Sbjct: 25 KQLHAQFIRTQSLSHTS-ASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQ 83
Query: 83 NLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDDDVV 142
+L K ++ F M A + PDH VF S++K+C + R G+ VH V D
Sbjct: 84 SLFSKALASFVEMRASGRC-PDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYT 142
Query: 143 KSSLVDMYAKC---GLPNNARAVFDSIKLKNSVSW-------TAMLSAYARSGRKKDAME 192
++L++MYAK G + VFD + + S S T ++ S R+
Sbjct: 143 GNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRR----- 197
Query: 193 IFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFA 252
+FE P +++ + +++G QS DA EM + D LSS++ + +
Sbjct: 198 VFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLK-PDSFTLSSVLPIFSEYV 256
Query: 253 VLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIV 312
+ GK+IHG VI G +S ++I +++VDMYAK + I ++ +F R+ +D +SW S++
Sbjct: 257 DVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVA 316
Query: 313 GTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGIT 372
G Q+G+ E L L+ +MV+A VKP V F +I AC+H+ + G++L ++ G
Sbjct: 317 GYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRG-GFG 375
Query: 373 PSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALL 414
++ + L+D+ S+ G++ A + M DE +W A++
Sbjct: 376 SNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAII 416
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 1/174 (0%)
Query: 23 KTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQA 82
K +H +I+ G+ + ++L+D Y K ++ + + + RD +SW S++ Y Q
Sbjct: 262 KEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQN 321
Query: 83 NLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDDDVV 142
+ + +F M+ K++P F+S++ AC L LGKQ+H + F + +
Sbjct: 322 GRYNEALRLFRQMVTA-KVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFI 380
Query: 143 KSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQ 196
S+LVDMY+KCG AR +FD + + + VSWTA++ +A G +A+ +FE+
Sbjct: 381 ASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEE 434
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 23 KTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQA 82
K LH +++ G + + L+D Y KC ++ A + + M D VSW +I+ +
Sbjct: 363 KQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALH 422
Query: 83 NLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLG 119
+ +S+F M ++P+ F +++ AC +G
Sbjct: 423 GHGHEAVSLFEEM-KRQGVKPNQVAFVAVLTACSHVG 458
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 436 bits (1121), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/601 (36%), Positives = 338/601 (56%), Gaps = 34/601 (5%)
Query: 10 LRVCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDH 69
L+ C ++ + + +HA I++ + NTL++ Y KC ++ A + E+MPQRD
Sbjct: 67 LKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDF 126
Query: 70 VSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHA 129
V+W ++++ Y+Q + P + F+ ML P+ F +S++KA + G Q+H
Sbjct: 127 VTWTTLISGYSQHDRPCDALLFFNQMLRFG-YSPNEFTLSSVIKAAAAERRGCCGHQLHG 185
Query: 130 CFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKD 189
FC KCG +N +A+L Y R G D
Sbjct: 186 ------FC-------------VKCGFDSNVHVG------------SALLDLYTRYGLMDD 214
Query: 190 AMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACA 249
A +F+ RN W AL++G + A F M R+G +S+ GAC+
Sbjct: 215 AQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFR-PSHFSYASLFGACS 273
Query: 250 NFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTS 309
+ LE GK +H +I G + F N ++DMYAK I A+ IF R+ ++DVVSW S
Sbjct: 274 STGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNS 333
Query: 310 IIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDY 369
++ AQHG +E + ++EM G++PNE++F+ ++ ACSH GL+ +G ++ M +D
Sbjct: 334 LLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD- 392
Query: 370 GITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKHHRNTEMGTRV 429
GI P HY ++DLL R+G L+ A I+ MP EP W ALL+AC+ H+NTE+G
Sbjct: 393 GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYA 452
Query: 430 ANHLLSLKPEDPSSYILLSNVYASAAMWQHVSKVRKLMSVMEVKKEPGYSYIEFGKGSHI 489
A H+ L P+DP +++L N+YAS W ++VRK M VKKEP S++E H+
Sbjct: 453 AEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHM 512
Query: 490 FYAGETSHPLKDEIFELLTELDAEMKRRGYVPDTSSVLHDMEQKEKERQLFWHSERLAVA 549
F A + HP ++EI E+ A++K GYVPDTS V+ ++Q+E+E L +HSE++A+A
Sbjct: 513 FVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALA 572
Query: 550 YGLLKSVPGTVLRVVKNLRVCGDCHIVMKMISRITKREIVVRDATRYHHFKDGKCSCNDF 609
+ LL + PG+ + + KN+RVCGDCH +K+ S++ REI+VRD R+HHFKDG CSC D+
Sbjct: 573 FALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDY 632
Query: 610 W 610
W
Sbjct: 633 W 633
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 152/317 (47%), Gaps = 34/317 (10%)
Query: 104 DHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVF 163
D + +L+K C G+ VHA + S F D V+ ++L++MYAKCG AR VF
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 164 DSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFY 223
+ + ++ V+WT ++S Y++ R DA+ F Q
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQ--------------------------- 151
Query: 224 SFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMY 283
M R G + LSS++ A A G Q+HG + G++S + + +A++D+Y
Sbjct: 152 ----MLRFGYS-PNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLY 206
Query: 284 AKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFV 343
+ + A+ +F + ++ VSW ++I G A+ E+ L L+ M+ G +P+ ++
Sbjct: 207 TRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYA 266
Query: 344 GLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPF 403
L ACS G + +G+ + MI+ + T LLD+ ++SG + +A + +
Sbjct: 267 SLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT-LLDMYAKSGSIHDARKIFDRLA- 324
Query: 404 EPDEPTWAALLSACKHH 420
+ D +W +LL+A H
Sbjct: 325 KRDVVSWNSLLTAYAQH 341
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 101/199 (50%), Gaps = 2/199 (1%)
Query: 236 VDPLVLSSIVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDI 295
D ++++ C F +L G+ +H ++ + + + N +++MYAKC + A+ +
Sbjct: 58 ADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKV 117
Query: 296 FGRMRRKDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLV 355
F +M ++D V+WT++I G +QH + + L +++M+ G PNE T +I A +
Sbjct: 118 FEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRG 177
Query: 356 GKGRKLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLS 415
G +L ++ G ++ + LLDL +R G +D+A+ + A+ D +W AL++
Sbjct: 178 CCGHQLHGFCVK-CGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRND-VSWNALIA 235
Query: 416 ACKHHRNTEMGTRVANHLL 434
TE + +L
Sbjct: 236 GHARRSGTEKALELFQGML 254
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 436 bits (1120), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/573 (38%), Positives = 344/573 (60%), Gaps = 17/573 (2%)
Query: 54 VQYAHHLLEEMPQRDHVSWASILTAYNQANLPQKTISI--FSTMLALDKLQPDHFVFASL 111
+ YAH + +MPQR+ SW +I+ +++++ + I+I F M++ + ++P+ F F S+
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 112 VKACGSLGATRLGKQVHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVF-------D 164
+KAC G + GKQ+H + F D+ V S+LV MY CG +AR +F D
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194
Query: 165 SIKLKNS-------VSWTAMLSAYARSGRKKDAMEIFEQAPVRNLFLWTALVSGLVQSRN 217
+ + + V W M+ Y R G K A +F++ R++ W ++SG +
Sbjct: 195 MVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGF 254
Query: 218 EIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIHGLVIALGYESCLFISN 277
DA F EM++ + + + L S++ A + LELG+ +H G + +
Sbjct: 255 FKDAVEVFREMKKGDIR-PNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGS 313
Query: 278 AIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKP 337
A++DMY+KC I A +F R+ R++V++W+++I G A HGQA + + + +M AGV+P
Sbjct: 314 ALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRP 373
Query: 338 NEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENL 397
++V ++ L+ ACSH GLV +GR+ F M+ G+ P ++HY C++DLL RSG LDEAE
Sbjct: 374 SDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEF 433
Query: 398 IKAMPFEPDEPTWAALLSACKHHRNTEMGTRVANHLLSLKPEDPSSYILLSNVYASAAMW 457
I MP +PD+ W ALL AC+ N EMG RVAN L+ + P D +Y+ LSN+YAS W
Sbjct: 434 ILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNW 493
Query: 458 QHVSKVRKLMSVMEVKKEPGYSYIEFGKGSHIFYAGETSHPLKDEIFELLTELDAEMKRR 517
VS++R M +++K+PG S I+ H F + SHP EI +L E+ +++
Sbjct: 494 SEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLA 553
Query: 518 GYVPDTSSVLHDMEQKEKERQLFWHSERLAVAYGLLKSVPGTVLRVVKNLRVCGDCHIVM 577
GY P T+ VL ++E+++KE L +HSE++A A+GL+ + PG +R+VKNLR+C DCH +
Sbjct: 554 GYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSI 613
Query: 578 KMISRITKREIVVRDATRYHHFKDGKCSCNDFW 610
K+IS++ KR+I VRD R+HHF+DG CSC D+W
Sbjct: 614 KLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 148/302 (49%), Gaps = 40/302 (13%)
Query: 40 LPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQANLPQKTISIFSTMLALD 99
L N +ID Y + + A L ++M QR VSW ++++ Y+ + + +F M D
Sbjct: 210 LWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGD 269
Query: 100 KLQPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNA 159
++P++ S++ A LG+ LG+ +H S DDV+ S+L+DMY+KCG+ A
Sbjct: 270 -IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKA 328
Query: 160 RAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIF---EQAPVRN-----LFLWTALV-S 210
VF+ + +N ++W+AM++ +A G+ DA++ F QA VR + L TA
Sbjct: 329 IHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHG 388
Query: 211 GLVQSRNE-------IDAFYSFIEMRREGVDIV--------------------DPLVLSS 243
GLV+ +D IE VD++ D ++ +
Sbjct: 389 GLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKA 448
Query: 244 IVGACANFAVLELGKQIHGLVIAL-GYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRK 302
++GAC +E+GK++ +++ + ++S ++ A+ +MYA + ++ RM+ K
Sbjct: 449 LLGACRMQGNVEMGKRVANILMDMVPHDSGAYV--ALSNMYASQGNWSEVSEMRLRMKEK 506
Query: 303 DV 304
D+
Sbjct: 507 DI 508
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 435 bits (1119), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/654 (36%), Positives = 376/654 (57%), Gaps = 69/654 (10%)
Query: 25 LHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQANL 84
+H ++K GL + P+ N+LI+ Y KC V+ A L ++ + V+W S+++ Y L
Sbjct: 216 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 275
Query: 85 PQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDDDVVKS 144
+ + +F +M L+ ++ FAS++K C +L R +Q+H V F D +++
Sbjct: 276 DLEALGMFYSM-RLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRT 334
Query: 145 SLVDMYAKCGLPNNARAVFDSIK-LKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVR--- 200
+L+ Y+KC +A +F I + N VSWTAM+S + ++ K++A+++F + +
Sbjct: 335 ALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVR 394
Query: 201 -NLFLWTALVSGL------------VQSRNE---------IDAFYSFIEMRR-----EGV 233
N F ++ +++ L V++ E +DA+ ++ G+
Sbjct: 395 PNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGI 454
Query: 234 DIVDPLVLSSIVGACAN----------FAVLELG-------------------------- 257
D D + S+++ A F L G
Sbjct: 455 DDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQG 514
Query: 258 KQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQH 317
KQ HG I +S L +S+A++ MYAK +I +A+++F R R KD+VSW S+I G AQH
Sbjct: 515 KQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQH 574
Query: 318 GQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQH 377
GQA + L ++ EM VK + VTF+G+ AC+H GLV +G K F M+ D I P+ +H
Sbjct: 575 GQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEH 634
Query: 378 YTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKHHRNTEMGTRVANHLLSLK 437
+C++DL SR+G L++A +I+ MP W +L+AC+ H+ TE+G A ++++K
Sbjct: 635 NSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMK 694
Query: 438 PEDPSSYILLSNVYASAAMWQHVSKVRKLMSVMEVKKEPGYSYIEFGKGSHIFYAGETSH 497
PED ++Y+LLSN+YA + WQ +KVRKLM+ VKKEPGYS+IE ++ F AG+ SH
Sbjct: 695 PEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSH 754
Query: 498 PLKDEIFELLTELDAEMKRRGYVPDTSSVLHDMEQKEKERQLFWHSERLAVAYGLLKSVP 557
PLKD+I+ L +L +K GY PDTS VL D++ + KE L HSERLA+A+GL+ +
Sbjct: 755 PLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPK 814
Query: 558 GTVLRVVKNLRVCGDCHIVMKMISRITKREIVVRDATRYHHF-KDGKCSCNDFW 610
G+ L ++KNLRVCGDCH+V+K+I++I +REIVVRD+ R+HHF DG CSC DFW
Sbjct: 815 GSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/462 (26%), Positives = 211/462 (45%), Gaps = 43/462 (9%)
Query: 1 MQISHYLHRLRVCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHL 60
M S + L+V A L + LH Q IK G + +L+D Y K + +
Sbjct: 91 MDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKV 150
Query: 61 LEEMPQRDHVSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGA 120
+EM +R+ V+W ++++ Y + ++ + +++F M + QP+ F FA+ + G
Sbjct: 151 FDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQN-EGTQPNSFTFAAALGVLAEEGV 209
Query: 121 TRLGKQVHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSA 180
G QVH V + V +SL+++Y KCG AR +FD ++K+ V+W +M+S
Sbjct: 210 GGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISG 269
Query: 181 YARSGRKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLV 240
YA +G +A+ + FYS MR V + +
Sbjct: 270 YAANGLDLEALGM----------------------------FYS---MRLNYVRLSES-S 297
Query: 241 LSSIVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMR 300
+S++ CAN L +Q+H V+ G+ I A++ Y+KC+ ++ A +F +
Sbjct: 298 FASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIG 357
Query: 301 -RKDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGR 359
+VVSWT++I G Q+ EE + L+ EM GV+PNE T+ ++ A +
Sbjct: 358 CVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHA 417
Query: 360 KLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKH 419
++ K+ E T LLD + G ++EA + + + D W+A+L+
Sbjct: 418 QVVKTNYERSSTVG-----TALLDAYVKLGKVEEAAKVFSGID-DKDIVAWSAMLAGYAQ 471
Query: 420 HRNTEMGTRVANHLL--SLKPEDPS-SYILLSNVYASAAMWQ 458
TE ++ L +KP + + S IL +A+M Q
Sbjct: 472 TGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQ 513
Score = 125 bits (314), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 168/360 (46%), Gaps = 34/360 (9%)
Query: 57 AHHLLEEMPQRDHVSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACG 116
AH+L ++ P RD S+ S+L +++ Q+ +F + L ++ D +F+S++K
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLG-MEMDCSIFSSVLKVSA 104
Query: 117 SLGATRLGKQVHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTA 176
+L G+Q+H + F DD V +SLVD Y K
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMK------------------------ 140
Query: 177 MLSAYARSGRKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIV 236
KD ++F++ RN+ WT L+SG ++ + F+ M+ EG
Sbjct: 141 -------GSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQ-P 192
Query: 237 DPLVLSSIVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIF 296
+ ++ +G A V G Q+H +V+ G + + +SN+++++Y KC ++ A+ +F
Sbjct: 193 NSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILF 252
Query: 297 GRMRRKDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVG 356
+ K VV+W S+I G A +G E L ++ M V+ +E +F +I C+++ +
Sbjct: 253 DKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELR 312
Query: 357 KGRKLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSA 416
+L S+++ YG T L+ S+ + +A L K + + +W A++S
Sbjct: 313 FTEQLHCSVVK-YGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISG 371
Score = 94.0 bits (232), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 120/233 (51%), Gaps = 3/233 (1%)
Query: 184 SGRKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSS 243
S R +A +F+++P R+ + +L+ G + +A F+ + R G+++ D + SS
Sbjct: 40 SSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEM-DCSIFSS 98
Query: 244 IVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKD 303
++ A G+Q+H I G+ + + ++VD Y K S+ + +F M+ ++
Sbjct: 99 VLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERN 158
Query: 304 VVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFK 363
VV+WT++I G A++ +E L L+ M + G +PN TF + + G+ G+G ++
Sbjct: 159 VVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHT 218
Query: 364 SMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSA 416
++++ G+ ++ L++L + G++ +A L + TW +++S
Sbjct: 219 VVVKN-GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKS-VVTWNSMISG 269
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 10/177 (5%)
Query: 10 LRVCARHQIALTV-KTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRD 68
L VCA ++ K H IK L + + L+ Y K ++ A + + ++D
Sbjct: 501 LNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKD 560
Query: 69 HVSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVH 128
VSW S+++ Y Q K + +F M K++ D F + AC G G++
Sbjct: 561 LVSWNSMISGYAQHGQAMKALDVFKEM-KKRKVKMDGVTFIGVFAACTHAGLVEEGEKYF 619
Query: 129 ACFV----LSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSI-KLKNSVSWTAMLSA 180
V ++P + + S +VD+Y++ G A V +++ S W +L+A
Sbjct: 620 DIMVRDCKIAPTKEHN---SCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAA 673
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 434 bits (1117), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/571 (37%), Positives = 339/571 (59%), Gaps = 38/571 (6%)
Query: 40 LPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQANLPQKTISIFSTMLALD 99
L N LI+ Y K +L+ AH L ++MPQR+ +SW ++++AY++ + QK + + ML D
Sbjct: 98 LVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR-D 156
Query: 100 KLQPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNA 159
++P+ + ++S++++C + R+ +H + D V+S+L+D++AK G P
Sbjct: 157 NVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEP--- 210
Query: 160 RAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEI 219
+DA+ +F++ + +W +++ G Q+
Sbjct: 211 ----------------------------EDALSVFDEMVTGDAIVWNSIIGGFAQNSRSD 242
Query: 220 DAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIHGLVIALGYESCLFISNAI 279
A F M+R G I + L+S++ AC A+LELG Q H V + Y+ L ++NA+
Sbjct: 243 VALELFKRMKRAGF-IAEQATLTSVLRACTGLALLELGMQAH--VHIVKYDQDLILNNAL 299
Query: 280 VDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNE 339
VDMY KC + A +F +M+ +DV++W+++I G AQ+G ++E L L++ M S+G KPN
Sbjct: 300 VDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNY 359
Query: 340 VTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIK 399
+T VG+++ACSH GL+ G F+SM + YGI P +HY C++DLL ++G LD+A L+
Sbjct: 360 ITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLN 419
Query: 400 AMPFEPDEPTWAALLSACKHHRNTEMGTRVANHLLSLKPEDPSSYILLSNVYASAAMWQH 459
M EPD TW LL AC+ RN + A +++L PED +Y LLSN+YA++ W
Sbjct: 420 EMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDS 479
Query: 460 VSKVRKLMSVMEVKKEPGYSYIEFGKGSHIFYAGETSHPLKDEIFELLTELDAEMKRRGY 519
V ++R M +KKEPG S+IE K H F G+ SHP E+ + L +L + GY
Sbjct: 480 VEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGY 539
Query: 520 VPDTSSVLHDMEQKEKERQLFWHSERLAVAYGLLKSVPGTVLRVVKNLRVCGDCHIVMKM 579
VP+T+ VL D+E ++ E L HSE+LA+A+GL+ V+R+ KNLR+CGDCH+ K+
Sbjct: 540 VPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKL 599
Query: 580 ISRITKREIVVRDATRYHHFKDGKCSCNDFW 610
S++ R IV+RD RYHHF+DGKCSC D+W
Sbjct: 600 ASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 92/175 (52%), Gaps = 3/175 (1%)
Query: 22 VKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQ 81
V+ LH IIK GL + + LID + K + A + +EM D + W SI+ + Q
Sbjct: 178 VRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQ 237
Query: 82 ANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDDDV 141
+ + +F M + + S+++AC L LG Q H V + D +
Sbjct: 238 NSRSDVALELFKRMKRAGFI-AEQATLTSVLRACTGLALLELGMQAHVHIV--KYDQDLI 294
Query: 142 VKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQ 196
+ ++LVDMY KCG +A VF+ +K ++ ++W+ M+S A++G ++A+++FE+
Sbjct: 295 LNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFER 349
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 93/190 (48%), Gaps = 5/190 (2%)
Query: 237 DPLVLSSIVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIF 296
D S ++ C + + G I + G+ +F+ N +++MY K + + A +F
Sbjct: 60 DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119
Query: 297 GRMRRKDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVG 356
+M +++V+SWT++I ++ ++ L L M+ V+PN T+ ++ +C+ + V
Sbjct: 120 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV- 178
Query: 357 KGRKLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSA 416
R L +I++ G+ + + L+D+ ++ G ++A ++ M D W +++
Sbjct: 179 --RMLHCGIIKE-GLESDVFVRSALIDVFAKLGEPEDALSVFDEM-VTGDAIVWNSIIGG 234
Query: 417 CKHHRNTEMG 426
+ +++
Sbjct: 235 FAQNSRSDVA 244
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 82/176 (46%), Gaps = 11/176 (6%)
Query: 10 LRVCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDH 69
LR C +AL + A + + Q L N L+D Y KC ++ A + +M +RD
Sbjct: 267 LRACT--GLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDV 324
Query: 70 VSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLG----K 125
++W+++++ Q Q+ + +F M + +P++ ++ AC G G +
Sbjct: 325 ITWSTMISGLAQNGYSQEALKLFERMKS-SGTKPNYITIVGVLFACSHAGLLEDGWYYFR 383
Query: 126 QVHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLK-NSVSWTAMLSA 180
+ + + P + ++D+ K G ++A + + ++ + ++V+W +L A
Sbjct: 384 SMKKLYGIDPVREH---YGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 434 bits (1117), Expect = e-121, Method: Compositional matrix adjust.
Identities = 211/560 (37%), Positives = 336/560 (60%), Gaps = 3/560 (0%)
Query: 52 DLVQYAHHLLEEMPQRDHVSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASL 111
+L+ YA+ + ++ + + ++ ++ P K ++ ML ++ PD+ F L
Sbjct: 65 NLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLK-SRIWPDNITFPFL 123
Query: 112 VKACGSLGATRLGKQVHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNS 171
+KA + +G+Q H+ V F +D V++SLV MYA CG A +F + ++
Sbjct: 124 IKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDV 183
Query: 172 VSWTAMLSAYARSGRKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRRE 231
VSWT+M++ Y + G ++A E+F++ P RNLF W+ +++G ++ A F M+RE
Sbjct: 184 VSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKRE 243
Query: 232 GVDIVDPLVLSSIVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIA 291
GV + + V+ S++ +CA+ LE G++ + V+ L + A+VDM+ +C DI
Sbjct: 244 GV-VANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEK 302
Query: 292 AKDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSH 351
A +F + D +SW+SII G A HG A + + + +M+S G P +VTF ++ ACSH
Sbjct: 303 AIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSH 362
Query: 352 VGLVGKGRKLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWA 411
GLV KG +++++M +D+GI P L+HY C++D+L R+G L EAEN I M +P+ P
Sbjct: 363 GGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILG 422
Query: 412 ALLSACKHHRNTEMGTRVANHLLSLKPEDPSSYILLSNVYASAAMWQHVSKVRKLMSVME 471
ALL ACK ++NTE+ RV N L+ +KPE Y+LLSN+YA A W + +R +M
Sbjct: 423 ALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKL 482
Query: 472 VKKEPGYSYIEF-GKGSHIFYAGETSHPLKDEIFELLTELDAEMKRRGYVPDTSSVLHDM 530
VKK PG+S IE GK + + HP +I E+ +++ GY +T D+
Sbjct: 483 VKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDV 542
Query: 531 EQKEKERQLFWHSERLAVAYGLLKSVPGTVLRVVKNLRVCGDCHIVMKMISRITKREIVV 590
+++EKE + HSE+LA+AYG++K+ PGT +R+VKNLRVC DCH V K+IS + RE++V
Sbjct: 543 DEEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIV 602
Query: 591 RDATRYHHFKDGKCSCNDFW 610
RD R+HHF++G CSC D+W
Sbjct: 603 RDRNRFHHFRNGVCSCRDYW 622
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 138/318 (43%), Gaps = 50/318 (15%)
Query: 43 TLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQANLPQKTISIFSTMLALDKLQ 102
+++ Y KC +V+ A + +EMP R+ +W+ ++ Y + N +K I +F M + +
Sbjct: 188 SMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFM-KREGVV 246
Query: 103 PDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAV 162
+ V S++ +C LGA G++ + V S + ++ ++LVDM+ +CG A V
Sbjct: 247 ANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHV 306
Query: 163 FDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAF 222
F+ + +S+SW++++ A G AM F Q ++S R+
Sbjct: 307 FEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQ-----------MISLGFIPRD----- 350
Query: 223 YSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQI-------HGLVIALGYESCLFI 275
+ ++++ AC++ ++E G +I HG+ L + C
Sbjct: 351 ----------------VTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGC--- 391
Query: 276 SNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGV 335
IVDM + + A++ +M K ++G + + E M+ V
Sbjct: 392 ---IVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNML-IKV 447
Query: 336 KPNEVTFVGL---IYACS 350
KP + L IYAC+
Sbjct: 448 KPEHSGYYVLLSNIYACA 465
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 40 LPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQANLPQKTISIFSTMLALD 99
L L+D + +C ++ A H+ E +P+ D +SW+SI+ K + FS M++L
Sbjct: 286 LGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLG 345
Query: 100 KLQPDHFVFASLVKACGSLGATRLGKQVH 128
+ P F +++ AC G G +++
Sbjct: 346 FI-PRDVTFTAVLSACSHGGLVEKGLEIY 373
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 432 bits (1111), Expect = e-120, Method: Compositional matrix adjust.
Identities = 210/577 (36%), Positives = 343/577 (59%), Gaps = 10/577 (1%)
Query: 42 NTLIDAYGKCDLVQYAHHLLEEMP----QRDHVSWASILTAYNQANLPQKTISIFSTMLA 97
+ L+ AY + ++ +L EM + + VSW IL+ +N++ ++ + +F +
Sbjct: 186 SALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHH 245
Query: 98 LDKLQPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDDDVVKSSLVDMYAKCGLPN 157
L PD +S++ + G +G+ +H + D V S+++DMY K G
Sbjct: 246 LG-FCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVY 304
Query: 158 NARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFE----QAPVRNLFLWTALVSGLV 213
++F+ ++ + A ++ +R+G A+E+FE Q N+ WT++++G
Sbjct: 305 GIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCA 364
Query: 214 QSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIHGLVIALGYESCL 273
Q+ +I+A F EM+ GV + + + S++ AC N A L G+ HG + + +
Sbjct: 365 QNGKDIEALELFREMQVAGVK-PNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNV 423
Query: 274 FISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLALYDEMVSA 333
+ +A++DMYAKC I ++ +F M K++V W S++ G + HG+A+E +++++ ++
Sbjct: 424 HVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRT 483
Query: 334 GVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDE 393
+KP+ ++F L+ AC VGL +G K FK M E+YGI P L+HY+C+++LL R+G L E
Sbjct: 484 RLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQE 543
Query: 394 AENLIKAMPFEPDEPTWAALLSACKHHRNTEMGTRVANHLLSLKPEDPSSYILLSNVYAS 453
A +LIK MPFEPD W ALL++C+ N ++ A L L+PE+P +Y+LLSN+YA+
Sbjct: 544 AYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAA 603
Query: 454 AAMWQHVSKVRKLMSVMEVKKEPGYSYIEFGKGSHIFYAGETSHPLKDEIFELLTELDAE 513
MW V +R M + +KK PG S+I+ + AG+ SHP D+I E + E+ E
Sbjct: 604 KGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKE 663
Query: 514 MKRRGYVPDTSSVLHDMEQKEKERQLFWHSERLAVAYGLLKSVPGTVLRVVKNLRVCGDC 573
M++ G+ P+ LHD+E++E+E+ L+ HSE+LAV +GLL + GT L+V+KNLR+CGDC
Sbjct: 664 MRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDC 723
Query: 574 HIVMKMISRITKREIVVRDATRYHHFKDGKCSCNDFW 610
H V+K IS REI +RD R+HHFKDG CSC DFW
Sbjct: 724 HAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 175 bits (444), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 128/464 (27%), Positives = 219/464 (47%), Gaps = 45/464 (9%)
Query: 26 HAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQANLP 85
HA+I+K G G + LI +Y + A +L+ +P S++S++ A +A L
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 86 QKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDDDVVKSS 145
++I +FS M + L PD V +L K C L A ++GKQ+H +S D V+ S
Sbjct: 98 TQSIGVFSRMFS-HGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGS 156
Query: 146 LVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVR----N 201
+ MY +CG +AR VFD + K+ V+ +A+L AYAR G ++ + I + N
Sbjct: 157 MFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEAN 216
Query: 202 LFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIH 261
+ W ++SG +S +A F ++ G D + +SS++ + + +L +G+ IH
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVVMFQKIHHLGF-CPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 262 GLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMR--------------------- 300
G VI G + +A++DMY K + +F +
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335
Query: 301 --------------RKDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLI 346
+VVSWTSII G AQ+G+ E L L+ EM AGVKPN VT ++
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395
Query: 347 YACSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPD 406
AC ++ +G GR + + + ++ + L+D+ ++ G ++ ++ + MP + +
Sbjct: 396 PACGNIAALGHGRSTHGFAVRVH-LLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK-N 453
Query: 407 EPTWAALLSACKHHRNTEMGTRVANHLL--SLKPEDPSSYILLS 448
W +L++ H + + L+ LKP+ S LLS
Sbjct: 454 LVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLS 497
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 36/208 (17%)
Query: 23 KTLHAQIIKLGLHQYGPLPNTLIDAYGK---------------------CD--------- 52
+ +H +IK GL + + + +ID YGK C+
Sbjct: 272 RLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRN 331
Query: 53 -LVQYAHHLLEEMPQR----DHVSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFV 107
LV A + E ++ + VSW SI+ Q + + +F M + ++P+H
Sbjct: 332 GLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREM-QVAGVKPNHVT 390
Query: 108 FASLVKACGSLGATRLGKQVHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIK 167
S++ ACG++ A G+ H V D+ V S+L+DMYAKCG N ++ VF+ +
Sbjct: 391 IPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMP 450
Query: 168 LKNSVSWTAMLSAYARSGRKKDAMEIFE 195
KN V W ++++ ++ G+ K+ M IFE
Sbjct: 451 TKNLVCWNSLMNGFSMHGKAKEVMSIFE 478
Score = 75.9 bits (185), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 109/248 (43%), Gaps = 33/248 (13%)
Query: 126 QVHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSG 185
Q HA + S +D + + L+ Y+ N+A V SI
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSI------------------- 76
Query: 186 RKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIV 245
P ++ +++L+ L +++ + F M G+ I D VL ++
Sbjct: 77 ------------PDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGL-IPDSHVLPNLF 123
Query: 246 GACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVV 305
CA + ++GKQIH + G + F+ ++ MY +C + A+ +F RM KDVV
Sbjct: 124 KVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVV 183
Query: 306 SWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSM 365
+ ++++ A+ G EE + + EM S+G++ N V++ G++ + G + +F+
Sbjct: 184 TCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQK- 242
Query: 366 IEDYGITP 373
I G P
Sbjct: 243 IHHLGFCP 250
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 23 KTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQA 82
++ H +++ L + + LID Y KC + + + MP ++ V W S++ ++
Sbjct: 408 RSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMH 467
Query: 83 NLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLG----KQVHACFVLSPFCD 138
++ +SIF +++ +L+PD F SL+ ACG +G T G K + + + P +
Sbjct: 468 GKAKEVMSIFESLMR-TRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLE 526
Query: 139 DDVVKSSLVDMYAKCGLPNNARAVFDSIKLK-NSVSWTAMLSA 180
S +V++ + G A + + + +S W A+L++
Sbjct: 527 H---YSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNS 566
>sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230
OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1
Length = 657
Score = 432 bits (1110), Expect = e-120, Method: Compositional matrix adjust.
Identities = 224/596 (37%), Positives = 349/596 (58%), Gaps = 10/596 (1%)
Query: 22 VKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQ--YAHHLLEEMPQRDHVSWASILTAY 79
+K +H +++ GL Q + LI K + YA ++E + R+ W +++ Y
Sbjct: 65 IKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGY 124
Query: 80 NQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHA-CFVLSPFCD 138
+ I+++ M +++ P F F++L+KACG++ LG+Q HA F L FC
Sbjct: 125 AIEGKFDEAIAMYGCMRK-EEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCF 183
Query: 139 DDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAP 198
V ++++DMY KC + AR VFD + ++ +SWT +++AYAR G + A E+FE P
Sbjct: 184 V-YVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLP 242
Query: 199 VRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGK 258
+++ WTA+V+G Q+ +A F M + G+ D + ++ + ACA +
Sbjct: 243 TKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIR-ADEVTVAGYISACAQLGASKYAD 301
Query: 259 QIHGLVIALGYESC--LFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQ 316
+ + GY + I +A++DMY+KC ++ A ++F M K+V +++S+I+G A
Sbjct: 302 RAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLAT 361
Query: 317 HGQAEETLALYDEMVS-AGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSL 375
HG+A+E L L+ MV+ +KPN VTFVG + ACSH GLV +GR++F SM + +G+ P+
Sbjct: 362 HGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTR 421
Query: 376 QHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKHHRNTEMGTRVANHLLS 435
HYTC++DLL R+G L EA LIK M EP W ALL AC+ H N E+ A HL
Sbjct: 422 DHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFE 481
Query: 436 LKPEDPSSYILLSNVYASAAMWQHVSKVRKLMSVMEVKKEPGYSYIEFGKGS-HIFYAGE 494
L+P+ +YILLSNVYASA W V +VRKL+ +KK P S++ G H F+ G
Sbjct: 482 LEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGN 541
Query: 495 TSHPLKDEIFELLTELDAEMKRRGYVPDTSSVLHDMEQKEKERQLFWHSERLAVAYGLLK 554
+HP+ ++I + L EL + GY PD SSV +D+ K L H+E+LA+A+ LL
Sbjct: 542 LNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFSLLT 601
Query: 555 SVPGTVLRVVKNLRVCGDCHIVMKMISRITKREIVVRDATRYHHFKDGKCSCNDFW 610
+ + + ++KNLR+C DCH M++ S +T + I++RD R+HHF+ G CSC DFW
Sbjct: 602 TNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657
Score = 92.4 bits (228), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 115/257 (44%), Gaps = 43/257 (16%)
Query: 10 LRVCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDH 69
L+ C + + HAQ +L + + NT+ID Y KC+ + A + +EMP+RD
Sbjct: 156 LKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDV 215
Query: 70 VSWASILTAYNQA-----------NLPQKTISIFSTMLA--------------LDKLQ-- 102
+SW ++ AY + +LP K + ++ M+ D+++
Sbjct: 216 ISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKS 275
Query: 103 ---PDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDDD--VVKSSLVDMYAKCGLPN 157
D A + AC LGA++ + S + D V+ S+L+DMY+KCG
Sbjct: 276 GIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVE 335
Query: 158 NARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIF-------EQAPVRNLFLWTALV- 209
A VF S+ KN ++++M+ A GR ++A+ +F E P F+ +
Sbjct: 336 EAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMAC 395
Query: 210 --SGLV-QSRNEIDAFY 223
SGLV Q R D+ Y
Sbjct: 396 SHSGLVDQGRQVFDSMY 412
Score = 56.2 bits (134), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 7/222 (3%)
Query: 239 LVLSSIVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIA--AKDIF 296
L++SS++ + L KQIHG V+ G + +I ++ K + A+ +
Sbjct: 47 LLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVI 106
Query: 297 GRMRRKDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVG 356
++ ++ WT++I G A G+ +E +A+Y M + P TF L+ AC + +
Sbjct: 107 EPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLN 166
Query: 357 KGRKLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSA 416
GR+ G T ++D+ + +D A + MP E D +W L++A
Sbjct: 167 LGRQFHAQTFRLRGFCFVYVGNT-MIDMYVKCESIDCARKVFDEMP-ERDVISWTELIAA 224
Query: 417 CKHHRNTEMGTRVANHLLSLKPEDPSSYILLSNVYASAAMWQ 458
N E A SL +D ++ + +A A Q
Sbjct: 225 YARVGNMECA---AELFESLPTKDMVAWTAMVTGFAQNAKPQ 263
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 431 bits (1108), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/632 (34%), Positives = 349/632 (55%), Gaps = 44/632 (6%)
Query: 21 TVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYN 80
T++T+H++II L L L+ AY V A + +E+P+R+ + ++ +Y
Sbjct: 57 TLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYV 116
Query: 81 QANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDDD 140
+ + +F TM + ++PDH+ F ++KAC G +G+++H
Sbjct: 117 NNGFYGEGVKVFGTMCGCN-VRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTL 175
Query: 141 VVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAP-- 198
V + LV MY KCG + AR V D + ++ VSW +++ YA++ R DA+E+ +
Sbjct: 176 FVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESV 235
Query: 199 --------------------------VRNLFL---------WTALVSGLVQSRNEIDAFY 223
V+++F W ++ +++ ++A
Sbjct: 236 KISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVE 295
Query: 224 SFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMY 283
+ M +G + D + ++S++ AC + + L LGK+IHG + L + NA++DMY
Sbjct: 296 LYSRMEADGFE-PDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMY 354
Query: 284 AKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFV 343
AKC + A+D+F M+ +DVVSWT++I G+ + +AL+ ++ +G+ P+ + FV
Sbjct: 355 AKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFV 414
Query: 344 GLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPF 403
+ ACSH GL+ +GR FK M + Y ITP L+H C++DLL R+G + EA I+ M
Sbjct: 415 TTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSM 474
Query: 404 EPDEPTWAALLSACKHHRNTEMGTRVANHLLSLKPEDPSSYILLSNVYASAAMWQHVSKV 463
EP+E W ALL AC+ H +T++G A+ L L PE Y+LLSN+YA A W+ V+ +
Sbjct: 475 EPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNI 534
Query: 464 RKLMSVMEVKKEPGYSYIEFGKGSHIFYAGETSHPLKDEIFELLTELDAEMKRRGYVPDT 523
R +M +KK PG S +E + H F G+ SHP DEI+ L L +MK GYVPD+
Sbjct: 535 RNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDS 594
Query: 524 SSVLHDMEQKEKERQLFWHSERLAVAYGLLKSV-----PGTVLRVVKNLRVCGDCHIVMK 578
S LHD+E+++KE L HSE+LA+ + L+ + +R+ KNLR+CGDCH+ K
Sbjct: 595 ESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAK 654
Query: 579 MISRITKREIVVRDATRYHHFKDGKCSCNDFW 610
+IS+IT REI++RD R+H F+ G CSC D+W
Sbjct: 655 LISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 431 bits (1107), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/601 (37%), Positives = 342/601 (56%), Gaps = 37/601 (6%)
Query: 12 VCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVS 71
V H AL + LHA + G + + N ++D Y K D V L +EMP+ D VS
Sbjct: 260 VVGLHDFALG-QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVS 318
Query: 72 WASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHACF 131
+ ++++Y+QA+ + ++ F M + +F FA+++ +L + ++G+Q+H C
Sbjct: 319 YNVVISSYSQADQYEASLHFFREMQCMG-FDRRNFPFATMLSIAANLSSLQMGRQLH-CQ 376
Query: 132 VLSPFCDDDV-VKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDA 190
L D + V +SLVDMYAKC + A +F S+
Sbjct: 377 ALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSL------------------------ 412
Query: 191 MEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACAN 250
P R WTAL+SG VQ F +MR + D ++++ A A+
Sbjct: 413 -------PQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLR-ADQSTFATVLKASAS 464
Query: 251 FAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSI 310
FA L LGKQ+H +I G +F + +VDMYAKC I A +F M ++ VSW ++
Sbjct: 465 FASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNAL 524
Query: 311 IVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYG 370
I A +G E + + +M+ +G++P+ V+ +G++ ACSH G V +G + F++M YG
Sbjct: 525 ISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYG 584
Query: 371 ITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKHHRNTEMGTRVA 430
ITP +HY C+LDLL R+G EAE L+ MPFEPDE W+++L+AC+ H+N + R A
Sbjct: 585 ITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAA 644
Query: 431 NHLLSL-KPEDPSSYILLSNVYASAAMWQHVSKVRKLMSVMEVKKEPGYSYIEFGKGSHI 489
L S+ K D ++Y+ +SN+YA+A W+ V V+K M +KK P YS++E H+
Sbjct: 645 EKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHV 704
Query: 490 FYAGETSHPLKDEIFELLTELDAEMKRRGYVPDTSSVLHDMEQKEKERQLFWHSERLAVA 549
F + + +HP DEI + EL AE++R GY PDTSSV+ D++++ K L +HSERLAVA
Sbjct: 705 FSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVA 764
Query: 550 YGLLKSVPGTVLRVVKNLRVCGDCHIVMKMISRITKREIVVRDATRYHHFKDGKCSCNDF 609
+ L+ + G + V+KNLR C DCH +K+IS+I KREI VRD +R+HHF +G CSC D+
Sbjct: 765 FALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDY 824
Query: 610 W 610
W
Sbjct: 825 W 825
Score = 106 bits (264), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 156/384 (40%), Gaps = 35/384 (9%)
Query: 35 HQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQANLPQKTISIFST 94
H+ NT+I + K V A L + MP R V+W ++ Y + + + +F
Sbjct: 76 HKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQ 135
Query: 95 MLALDKLQ-PDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDDDVVKSSLVDMYAKC 153
M PDH F +L+ C QVHA V K
Sbjct: 136 MCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAV-------------------KL 176
Query: 154 GLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVRNLFLWTALVSGLV 213
G N ++ LK +Y R A +FE+ P ++ + L++G
Sbjct: 177 GFDTNPFLTVSNVLLK----------SYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYE 226
Query: 214 QSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIHGLVIALGYESCL 273
+ ++ + F++MR+ G D S ++ A LG+Q+H L + G+
Sbjct: 227 KDGLYTESIHLFLKMRQSGHQPSD-FTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDA 285
Query: 274 FISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLALYDEMVSA 333
+ N I+D Y+K ++ + +F M D VS+ +I +Q Q E +L + EM
Sbjct: 286 SVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCM 345
Query: 334 GVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHY-TCLLDLLSRSGHLD 392
G F ++ +++ + GR+L + S+ H L+D+ ++ +
Sbjct: 346 GFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL--LATADSILHVGNSLVDMYAKCEMFE 403
Query: 393 EAENLIKAMPFEPDEPTWAALLSA 416
EAE + K++P + +W AL+S
Sbjct: 404 EAELIFKSLP-QRTTVSWTALISG 426
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 143/295 (48%), Gaps = 5/295 (1%)
Query: 125 KQVHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARS 184
++V A + + F D + +V+ + G + AR V+D + KN+VS M+S + ++
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 185 GRKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEM-RREGVDIVDPLVLSS 243
G A ++F+ P R + WT L+ ++ + +AF F +M R + D + ++
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 244 IVGACANFAVLELGKQIHGLVIALGYESCLF--ISNAIVDMYAKCSDIIAAKDIFGRMRR 301
++ C + Q+H + LG+++ F +SN ++ Y + + A +F +
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE 212
Query: 302 KDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKL 361
KD V++ ++I G + G E++ L+ +M +G +P++ TF G++ A + G++L
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQL 272
Query: 362 FKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSA 416
++ G + +LD S+ + E L MP E D ++ ++S+
Sbjct: 273 -HALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP-ELDFVSYNVVISS 325
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 7/175 (4%)
Query: 10 LRVCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDH 69
L+ A L K LHA II+ G + + L+D Y KC ++ A + EEMP R+
Sbjct: 459 LKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNA 518
Query: 70 VSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHA 129
VSW ++++A+ + I F+ M+ LQPD ++ AC G G +
Sbjct: 519 VSWNALISAHADNGDGEAAIGAFAKMIE-SGLQPDSVSILGVLTACSHCGFVEQGTEYFQ 577
Query: 130 CFVLSPFCDDDVVK---SSLVDMYAKCGLPNNARAVFDSIKLK-NSVSWTAMLSA 180
+SP K + ++D+ + G A + D + + + + W+++L+A
Sbjct: 578 --AMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNA 630
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 427 bits (1099), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/609 (36%), Positives = 350/609 (57%), Gaps = 40/609 (6%)
Query: 10 LRVCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDH 69
++ C+ + K H Q G + + LI Y C ++ A + +E+P+R+
Sbjct: 83 IKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNI 142
Query: 70 VSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVF------ASLVKACGSLGATRL 123
VSW S++ Y+ +S+F +L +D+ D +F S++ AC + A L
Sbjct: 143 VSWTSMIRGYDLNGNALDAVSLFKDLL-VDENDDDDAMFLDSMGLVSVISACSRVPAKGL 201
Query: 124 GKQVHACFVLSPFCDDDVVKSSLVDMYAKCGLPN--NARAVFDSIKLKNSVSWTAMLSAY 181
+ +H+ + F V ++L+D YAK G AR +FD I K+ VS+ +++S Y
Sbjct: 202 TESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVY 261
Query: 182 ARSGRKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVL 241
A+SG +A E+F + LV +N++ F + + L
Sbjct: 262 AQSGMSNEAFEVFRR-----------LV------KNKVVTF--------------NAITL 290
Query: 242 SSIVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRR 301
S+++ A ++ L +GK IH VI +G E + + +I+DMY KC + A+ F RM+
Sbjct: 291 STVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKN 350
Query: 302 KDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKL 361
K+V SWT++I G HG A + L L+ M+ +GV+PN +TFV ++ ACSH GL +G +
Sbjct: 351 KNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRW 410
Query: 362 FKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKHHR 421
F +M +G+ P L+HY C++DLL R+G L +A +LI+ M +PD W++LL+AC+ H+
Sbjct: 411 FNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHK 470
Query: 422 NTEMGTRVANHLLSLKPEDPSSYILLSNVYASAAMWQHVSKVRKLMSVMEVKKEPGYSYI 481
N E+ L L + Y+LLS++YA A W+ V +VR +M + K PG+S +
Sbjct: 471 NVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLL 530
Query: 482 EFGKGSHIFYAGETSHPLKDEIFELLTELDAEMKRRGYVPDTSSVLHDMEQKEKERQLFW 541
E H+F G+ HP +++I+E L EL+ ++ GYV +TSSV HD++++EKE L
Sbjct: 531 ELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRV 590
Query: 542 HSERLAVAYGLLKSVPGTVLRVVKNLRVCGDCHIVMKMISRITKREIVVRDATRYHHFKD 601
HSE+LA+A+G++ +VPG+ + VVKNLRVC DCH V+K+IS+I RE VVRDA R+HHFKD
Sbjct: 591 HSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKD 650
Query: 602 GKCSCNDFW 610
G CSC D+W
Sbjct: 651 GGCSCGDYW 659
Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 166/360 (46%), Gaps = 32/360 (8%)
Query: 64 MPQRDHVSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRL 123
+ + D SW S++ ++ + + FS+M L L P F +KAC SL
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKL-SLYPTRSSFPCAIKACSSLFDIFS 94
Query: 124 GKQVHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYAR 183
GKQ H + + D V S+L+ MY+ CG +AR VFD I +N VSWT+M+ Y
Sbjct: 95 GKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDL 154
Query: 184 SGRKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSS 243
+G DA+ +F+ LV ++ DA + +D + L S
Sbjct: 155 NGNALDAVSLFKDL--------------LVDENDDDDAMF------------LDSMGLVS 188
Query: 244 IVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSD--IIAAKDIFGRMRR 301
++ AC+ L + IH VI G++ + + N ++D YAK + + A+ IF ++
Sbjct: 189 VISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVD 248
Query: 302 KDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKP-NEVTFVGLIYACSHVGLVGKGRK 360
KD VS+ SI+ AQ G + E ++ +V V N +T ++ A SH G + G+
Sbjct: 249 KDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKC 308
Query: 361 LFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKHH 420
+ +I G+ + T ++D+ + G ++ A M + +W A+++ H
Sbjct: 309 IHDQVIR-MGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMK-NKNVRSWTAMIAGYGMH 366
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 68/155 (43%), Gaps = 3/155 (1%)
Query: 295 IFGR-MRRKDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVG 353
+F R + + DV SW S+I A+ G + E L + M + P +F I ACS +
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 354 LVGKGRKLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAAL 413
+ G++ + +G + + L+ + S G L++A + +P + + +W ++
Sbjct: 91 DIFSGKQTHQQAFV-FGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIP-KRNIVSWTSM 148
Query: 414 LSACKHHRNTEMGTRVANHLLSLKPEDPSSYILLS 448
+ + N + LL + +D + L S
Sbjct: 149 IRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDS 183
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 424 bits (1091), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/602 (37%), Positives = 335/602 (55%), Gaps = 34/602 (5%)
Query: 10 LRVCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDH 69
LR C + K ++ ++K G + N LID Y KC + A + M +D
Sbjct: 314 LRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDT 373
Query: 70 VSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHA 129
VSW SI++ Y Q+ + + +F M+ +++ Q DH + L+ L + GK +H+
Sbjct: 374 VSWNSIISGYIQSGDLMEAMKLFKMMMIMEE-QADHITYLMLISVSTRLADLKFGKGLHS 432
Query: 130 CFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKD 189
+ S C D V ++L+DMYAKC G D
Sbjct: 433 NGIKSGICIDLSVSNALIDMYAKC-------------------------------GEVGD 461
Query: 190 AMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACA 249
+++IF + W ++S V+ + +MR+ V + D + CA
Sbjct: 462 SLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEV-VPDMATFLVTLPMCA 520
Query: 250 NFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTS 309
+ A LGK+IH ++ GYES L I NA+++MY+KC + + +F RM R+DVV+WT
Sbjct: 521 SLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTG 580
Query: 310 IIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDY 369
+I +G+ E+ L + +M +G+ P+ V F+ +IYACSH GLV +G F+ M Y
Sbjct: 581 MIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHY 640
Query: 370 GITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKHHRNTEMGTRV 429
I P ++HY C++DLLSRS + +AE I+AMP +PD WA++L AC+ + E RV
Sbjct: 641 KIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERV 700
Query: 430 ANHLLSLKPEDPSSYILLSNVYASAAMWQHVSKVRKLMSVMEVKKEPGYSYIEFGKGSHI 489
+ ++ L P+DP IL SN YA+ W VS +RK + + K PGYS+IE GK H+
Sbjct: 701 SRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHV 760
Query: 490 FYAGETSHPLKDEIFELLTELDAEMKRRGYVPDTSSVLHDMEQKEKERQLF-WHSERLAV 548
F +G+ S P + I++ L L + M + GY+PD V ++E++E++R+L HSERLA+
Sbjct: 761 FSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAI 820
Query: 549 AYGLLKSVPGTVLRVVKNLRVCGDCHIVMKMISRITKREIVVRDATRYHHFKDGKCSCND 608
A+GLL + PGT L+V+KNLRVCGDCH V K+IS+I REI+VRDA R+H FKDG CSC D
Sbjct: 821 AFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKD 880
Query: 609 FW 610
W
Sbjct: 881 RW 882
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 202/426 (47%), Gaps = 40/426 (9%)
Query: 10 LRVCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDH 69
++ CA A ++ QI+ +G + N L+D Y + L+ A + +EMP RD
Sbjct: 113 IKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDL 172
Query: 70 VSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHA 129
VSW S+++ Y+ ++ + I+ L + PD F +S++ A G+L + G+ +H
Sbjct: 173 VSWNSLISGYSSHGYYEEALEIYHE-LKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHG 231
Query: 130 CFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKD 189
+ S VV + LV MY K P +AR VFD + +++SVS+ M+ Y +
Sbjct: 232 FALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLK------ 285
Query: 190 AMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDP--LVLSSIVGA 247
+E+ E++ + M E +D P L +SS++ A
Sbjct: 286 -LEMVEES----------------------------VRMFLENLDQFKPDLLTVSSVLRA 316
Query: 248 CANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSW 307
C + L L K I+ ++ G+ + N ++D+YAKC D+I A+D+F M KD VSW
Sbjct: 317 CGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSW 376
Query: 308 TSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIE 367
SII G Q G E + L+ M+ + + +T++ LI + + + G+ L + I+
Sbjct: 377 NSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIK 436
Query: 368 DYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKHHRNTEMGT 427
GI L L+D+ ++ G + ++ + +M D TW ++SAC + G
Sbjct: 437 S-GICIDLSVSNALIDMYAKCGEVGDSLKIFSSMG-TGDTVTWNTVISACVRFGDFATGL 494
Query: 428 RVANHL 433
+V +
Sbjct: 495 QVTTQM 500
Score = 119 bits (297), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 182/396 (45%), Gaps = 37/396 (9%)
Query: 22 VKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEM-PQRDHVSWASILTAYN 80
++ +HA +I LGL LID Y + + + P ++ W SI+ A++
Sbjct: 23 LRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFS 82
Query: 81 QANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDDD 140
+ L + + + L K+ PD + F S++KAC L +G V+ + F D
Sbjct: 83 KNGLFPEALEFYGK-LRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDL 141
Query: 141 VVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVR 200
V ++LVDMY++ GL AR ++F++ PVR
Sbjct: 142 FVGNALVDMYSRMGLLTRAR-------------------------------QVFDEMPVR 170
Query: 201 NLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQI 260
+L W +L+SG +A + E++ + + D +SS++ A N V++ G+ +
Sbjct: 171 DLVSWNSLISGYSSHGYYEEALEIYHELKNSWI-VPDSFTVSSVLPAFGNLLVVKQGQGL 229
Query: 261 HGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQA 320
HG + G S + ++N +V MY K A+ +F M +D VS+ ++I G +
Sbjct: 230 HGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMV 289
Query: 321 EETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHYTC 380
EE++ ++ E + KP+ +T ++ AC H+ + + ++ M++ G
Sbjct: 290 EESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLK-AGFVLESTVRNI 347
Query: 381 LLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSA 416
L+D+ ++ G + A ++ +M + D +W +++S
Sbjct: 348 LIDVYAKCGDMITARDVFNSMECK-DTVSWNSIISG 382
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 142/324 (43%), Gaps = 47/324 (14%)
Query: 6 YLHRLRVCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMP 65
YL + V R K LH+ IK G+ + N LID Y KC V + + M
Sbjct: 411 YLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMG 470
Query: 66 QRDHVSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGK 125
D V+W ++++A + + + +T + ++ PD F + C SL A RLGK
Sbjct: 471 TGDTVTWNTVISACVRFGDFATGLQV-TTQMRKSEVVPDMATFLVTLPMCASLAAKRLGK 529
Query: 126 QVHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSG 185
++H C + + + + ++L++MY+KCG N+ VF+ + ++ V+WT M+ AY G
Sbjct: 530 EIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYG 589
Query: 186 RKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIV 245
+ A+E +F +M + G+ + D +V +I+
Sbjct: 590 EGEKALE-------------------------------TFADMEKSGI-VPDSVVFIAII 617
Query: 246 GACANFAVLELG-------KQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGR 298
AC++ +++ G K + + + + +C +VD+ ++ I A++
Sbjct: 618 YACSHSGLVDEGLACFEKMKTHYKIDPMIEHYAC------VVDLLSRSQKISKAEEFIQA 671
Query: 299 MRRK-DVVSWTSIIVGTAQHGQAE 321
M K D W S++ G E
Sbjct: 672 MPIKPDASIWASVLRACRTSGDME 695
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 91/197 (46%), Gaps = 9/197 (4%)
Query: 2 QISHYLHRLRVCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLL 61
++ +L L +CA K +H +++ G + N LI+ Y KC ++ + +
Sbjct: 508 DMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVF 567
Query: 62 EEMPQRDHVSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGAT 121
E M +RD V+W ++ AY +K + F+ M + PD VF +++ AC G
Sbjct: 568 ERMSRRDVVTWTGMIYAYGMYGEGEKALETFADM-EKSGIVPDSVVFIAIIYACSHSGLV 626
Query: 122 RLGKQVHACF--VLSPFCDDDVVK--SSLVDMYAKCGLPNNARAVFDSIKLKNSVS-WTA 176
G ACF + + + D +++ + +VD+ ++ + A ++ +K S W +
Sbjct: 627 DEG---LACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWAS 683
Query: 177 MLSAYARSGRKKDAMEI 193
+L A SG + A +
Sbjct: 684 VLRACRTSGDMETAERV 700
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 422 bits (1086), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/589 (37%), Positives = 329/589 (55%), Gaps = 35/589 (5%)
Query: 24 TLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQAN 83
T+H+ IK GL + N LID Y + ++ + + M RD +SW SI+ AY
Sbjct: 268 TIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNE 327
Query: 84 LPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHACFVLSP--FCDDDV 141
P + IS+F M L ++QPD SL LG R + V F L F +D
Sbjct: 328 QPLRAISLFQEM-RLSRIQPDCLTLISLASILSQLGDIRACRSVQG-FTLRKGWFLEDIT 385
Query: 142 VKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVRN 201
+ +++V MYAK GL ++ARAVF+ + P +
Sbjct: 386 IGNAVVVMYAKLGLVDSARAVFNWL-------------------------------PNTD 414
Query: 202 LFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIH 261
+ W ++SG Q+ +A + M EG + S++ AC+ L G ++H
Sbjct: 415 VISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLH 474
Query: 262 GLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAE 321
G ++ G +F+ ++ DMY KC + A +F ++ R + V W ++I HG E
Sbjct: 475 GRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGE 534
Query: 322 ETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCL 381
+ + L+ EM+ GVKP+ +TFV L+ ACSH GLV +G+ F+ M DYGITPSL+HY C+
Sbjct: 535 KAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCM 594
Query: 382 LDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKHHRNTEMGTRVANHLLSLKPEDP 441
+D+ R+G L+ A IK+M +PD W ALLSAC+ H N ++G + HL ++PE
Sbjct: 595 VDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHV 654
Query: 442 SSYILLSNVYASAAMWQHVSKVRKLMSVMEVKKEPGYSYIEFGKGSHIFYAGETSHPLKD 501
++LLSN+YASA W+ V ++R + ++K PG+S +E +FY G +HP+ +
Sbjct: 655 GYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYE 714
Query: 502 EIFELLTELDAEMKRRGYVPDTSSVLHDMEQKEKERQLFWHSERLAVAYGLLKSVPGTVL 561
E++ LT L A++K GYVPD VL D+E EKE L HSERLA+A+ L+ + T +
Sbjct: 715 EMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTI 774
Query: 562 RVVKNLRVCGDCHIVMKMISRITKREIVVRDATRYHHFKDGKCSCNDFW 610
R+ KNLRVCGDCH V K IS+IT+REI+VRD+ R+HHFK+G CSC D+W
Sbjct: 775 RIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 179/407 (43%), Gaps = 43/407 (10%)
Query: 10 LRVCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDH 69
R C Q A K LHA+++ Q + L++ Y V A H + + RD
Sbjct: 61 FRYCTNLQSA---KCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDV 117
Query: 70 VSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHA 129
+W +++ Y +A + I FS + L PD+ F S++KAC ++ G ++H
Sbjct: 118 YAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHC 174
Query: 130 CFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKD 189
+ F D V +SL+ +Y++ NAR +FD + +++ SW AM+S Y +SG K+
Sbjct: 175 LALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKE 234
Query: 190 AMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACA 249
A+ + G+ +D + + S++ AC
Sbjct: 235 ALTL------------------------------------SNGLRAMDSVTVVSLLSACT 258
Query: 250 NFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTS 309
G IH I G ES LF+SN ++D+YA+ + + +F RM +D++SW S
Sbjct: 259 EAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNS 318
Query: 310 IIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDY 369
II + Q ++L+ EM + ++P+ +T + L S +G + R + +
Sbjct: 319 IIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKG 378
Query: 370 GITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSA 416
+ ++ + ++ G +D A + +P D +W ++S
Sbjct: 379 WFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP-NTDVISWNTIISG 424
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 422 bits (1084), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/607 (37%), Positives = 337/607 (55%), Gaps = 36/607 (5%)
Query: 6 YLHRLRVCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLE--E 63
+ H L+ C+ + +HAQ+ +LG + N LI Y KC + A + E
Sbjct: 122 FPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLP 181
Query: 64 MPQRDHVSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRL 123
+P+R VSW +I++AY Q P + + IFS M +D ++PD S++ A L +
Sbjct: 182 LPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD-VKPDWVALVSVLNAFTCLQDLKQ 240
Query: 124 GKQVHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYAR 183
G+ +HA V + + SL MYAKCG A+ +FD +K
Sbjct: 241 GRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMK---------------- 284
Query: 184 SGRKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSS 243
+P NL LW A++SG ++ +A F EM + V D + ++S
Sbjct: 285 -------------SP--NLILWNAMISGYAKNGYAREAIDMFHEMINKDVR-PDTISITS 328
Query: 244 IVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKD 303
+ ACA LE + ++ V Y +FIS+A++DM+AKC + A+ +F R +D
Sbjct: 329 AISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRD 388
Query: 304 VVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFK 363
VV W+++IVG HG+A E ++LY M GV PN+VTF+GL+ AC+H G+V +G F
Sbjct: 389 VVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFN 448
Query: 364 SMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKHHRNT 423
M D+ I P QHY C++DLL R+GHLD+A +IK MP +P W ALLSACK HR+
Sbjct: 449 RM-ADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHV 507
Query: 424 EMGTRVANHLLSLKPEDPSSYILLSNVYASAAMWQHVSKVRKLMSVMEVKKEPGYSYIEF 483
E+G A L S+ P + Y+ LSN+YA+A +W V++VR M + K+ G S++E
Sbjct: 508 ELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEV 567
Query: 484 GKGSHIFYAGETSHPLKDEIFELLTELDAEMKRRGYVPDTSSVLHDMEQKEKERQLFWHS 543
F G+ SHP +EI + +++ +K G+V + + LHD+ +E E L HS
Sbjct: 568 RGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHS 627
Query: 544 ERLAVAYGLLKSVPGTVLRVVKNLRVCGDCHIVMKMISRITKREIVVRDATRYHHFKDGK 603
ER+A+AYGL+ + GT LR+ KNLR C +CH K+IS++ REIVVRD R+HHFKDG
Sbjct: 628 ERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGV 687
Query: 604 CSCNDFW 610
CSC D+W
Sbjct: 688 CSCGDYW 694
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 2/160 (1%)
Query: 258 KQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQH 317
KQIH ++ LG + F+ ++ + DI A+ +F + R + W +II G +++
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 318 GQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQH 377
++ L +Y M A V P+ TF L+ ACS + + GR + + G +
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGR-FVHAQVFRLGFDADVFV 156
Query: 378 YTCLLDLLSRSGHLDEAENLIKAMPF-EPDEPTWAALLSA 416
L+ L ++ L A + + +P E +W A++SA
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSA 196
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 421 bits (1082), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/569 (37%), Positives = 333/569 (58%), Gaps = 35/569 (6%)
Query: 44 LIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQANLPQKTISIFSTMLALDKLQP 103
LI Y ++ A L +E+P +D VSW ++++ Y + ++ + +F M+ + ++P
Sbjct: 206 LIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTN-VRP 264
Query: 104 DHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVF 163
D ++V AC G+ LG+QVH F + + ++L+D+Y+KCG
Sbjct: 265 DESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCG--------- 315
Query: 164 DSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFY 223
+ A +FE+ P +++ W L+ G +A
Sbjct: 316 ----------------------ELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALL 353
Query: 224 SFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIHGLVIAL--GYESCLFISNAIVD 281
F EM R G + + + + SI+ ACA+ +++G+ IH + G + + +++D
Sbjct: 354 LFQEMLRSG-ETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLID 412
Query: 282 MYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVT 341
MYAKC DI AA +F + K + SW ++I G A HG+A+ + L+ M G++P+++T
Sbjct: 413 MYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDIT 472
Query: 342 FVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAM 401
FVGL+ ACSH G++ GR +F++M +DY +TP L+HY C++DLL SG EAE +I M
Sbjct: 473 FVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMM 532
Query: 402 PFEPDEPTWAALLSACKHHRNTEMGTRVANHLLSLKPEDPSSYILLSNVYASAAMWQHVS 461
EPD W +LL ACK H N E+G A +L+ ++PE+P SY+LLSN+YASA W V+
Sbjct: 533 EMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVA 592
Query: 462 KVRKLMSVMEVKKEPGYSYIEFGKGSHIFYAGETSHPLKDEIFELLTELDAEMKRRGYVP 521
K R L++ +KK PG S IE H F G+ HP EI+ +L E++ +++ G+VP
Sbjct: 593 KTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVP 652
Query: 522 DTSSVLHDMEQKEKERQLFWHSERLAVAYGLLKSVPGTVLRVVKNLRVCGDCHIVMKMIS 581
DTS VL +ME++ KE L HSE+LA+A+GL+ + PGT L +VKNLRVC +CH K+IS
Sbjct: 653 DTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLIS 712
Query: 582 RITKREIVVRDATRYHHFKDGKCSCNDFW 610
+I KREI+ RD TR+HHF+DG CSCND+W
Sbjct: 713 KIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 202 bits (513), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 128/451 (28%), Positives = 235/451 (52%), Gaps = 48/451 (10%)
Query: 21 TVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDL------VQYAHHLLEEMPQRDHVSWAS 74
+++ +HAQ+IK+GLH + LI+ C L + YA + + + + + + W +
Sbjct: 48 SLRIIHAQMIKIGLHNTNYALSKLIEF---CILSPHFEGLPYAISVFKTIQEPNLLIWNT 104
Query: 75 ILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHACFVLS 134
+ + ++ P + ++ M++L L P+ + F ++K+C A + G+Q+H VL
Sbjct: 105 MFRGHALSSDPVSALKLYVCMISLG-LLPNSYTFPFVLKSCAKSKAFKEGQQIHG-HVLK 162
Query: 135 PFCDDDV-VKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEI 193
CD D+ V +SL+ MY + G +A VFD ++ VS+TA++ YA G ++A ++
Sbjct: 163 LGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKL 222
Query: 194 FEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAV 253
F++ PV+++ W A++SG ++ N +A F +M + V D + ++V ACA
Sbjct: 223 FDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR-PDESTMVTVVSACAQSGS 281
Query: 254 LELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVG 313
+ELG+Q+H + G+ S L I NA++D+Y+KC ++ A +F R+ KDV+SW ++I G
Sbjct: 282 IELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGG 341
Query: 314 TAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDY-GIT 372
+E L L+ EM+ +G PN+VT + ++ AC+H+G + GR + + + G+T
Sbjct: 342 YTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVT 401
Query: 373 PSLQHYTCLLDLLSRSGHLDEAENLI-----------KAMPF------------------ 403
+ T L+D+ ++ G ++ A + AM F
Sbjct: 402 NASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRM 461
Query: 404 -----EPDEPTWAALLSACKHHRNTEMGTRV 429
+PD+ T+ LLSAC H ++G +
Sbjct: 462 RKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 421 bits (1081), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/602 (36%), Positives = 345/602 (57%), Gaps = 3/602 (0%)
Query: 10 LRVCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDH 69
+ CA+ + T + ++A I G+ + + L+D Y KC+ + A L +E +
Sbjct: 243 ISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNL 302
Query: 70 VSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHA 129
++ + Y + L ++ + +F+ M+ ++PD S + +C L GK H
Sbjct: 303 DLCNAMASNYVRQGLTREALGVFNLMMD-SGVRPDRISMLSAISSCSQLRNILWGKSCHG 361
Query: 130 CFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKD 189
+ + F D + ++L+DMY KC + A +FD + K V+W ++++ Y +G
Sbjct: 362 YVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDA 421
Query: 190 AMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMR-REGVDIVDPLVLSSIVGAC 248
A E FE P +N+ W ++SGLVQ +A F M+ +EGV+ D + + SI AC
Sbjct: 422 AWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVN-ADGVTMMSIASAC 480
Query: 249 ANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWT 308
+ L+L K I+ + G + + + +VDM+++C D +A IF + +DV +WT
Sbjct: 481 GHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWT 540
Query: 309 SIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIED 368
+ I A G AE + L+D+M+ G+KP+ V FVG + ACSH GLV +G+++F SM++
Sbjct: 541 AAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKL 600
Query: 369 YGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKHHRNTEMGTR 428
+G++P HY C++DLL R+G L+EA LI+ MP EP++ W +LL+AC+ N EM
Sbjct: 601 HGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAY 660
Query: 429 VANHLLSLKPEDPSSYILLSNVYASAAMWQHVSKVRKLMSVMEVKKEPGYSYIEFGKGSH 488
A + L PE SY+LLSNVYASA W ++KVR M ++K PG S I+ +H
Sbjct: 661 AAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTH 720
Query: 489 IFYAGETSHPLKDEIFELLTELDAEMKRRGYVPDTSSVLHDMEQKEKERQLFWHSERLAV 548
F +G+ SHP I +L E+ G+VPD S+VL D+++KEK L HSE+LA+
Sbjct: 721 EFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAM 780
Query: 549 AYGLLKSVPGTVLRVVKNLRVCGDCHIVMKMISRITKREIVVRDATRYHHFKDGKCSCND 608
AYGL+ S GT +R+VKNLRVC DCH K S++ REI++RD R+H+ + GKCSC D
Sbjct: 781 AYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGD 840
Query: 609 FW 610
FW
Sbjct: 841 FW 842
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 207/464 (44%), Gaps = 68/464 (14%)
Query: 10 LRVCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDH 69
L CA+ + +H I+K+G + + N+L+ Y +C + A + +EM +R+
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV 200
Query: 70 VSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHA 129
VSW S++ Y + + + + +F M+ +++ P+ ++ AC L G++V+A
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA 260
Query: 130 CFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKD 189
S +D++ S+LVDMY KC + A+ +FD N AM S Y R G ++
Sbjct: 261 FIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTRE 320
Query: 190 AMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACA 249
A+ +F NL M GV D + + S + +C+
Sbjct: 321 ALGVF------NL-------------------------MMDSGVR-PDRISMLSAISSCS 348
Query: 250 NFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTS 309
+ GK HG V+ G+ES I NA++DMY KC A IF RM K VV+W S
Sbjct: 349 QLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNS 408
Query: 310 IIVGTAQHGQAE------ETL------------------ALYDEMVSA--------GVKP 337
I+ G ++G+ + ET+ +L++E + GV
Sbjct: 409 IVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNA 468
Query: 338 NEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENL 397
+ VT + + AC H+G + + ++ IE GI ++ T L+D+ SR G + A ++
Sbjct: 469 DGVTMMSIASACGHLGALDLAKWIYY-YIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSI 527
Query: 398 IKAMPFEPDEPTWAALLSACKHHRNTEMGTRVANHLL--SLKPE 439
++ D W A + A N E + + ++ LKP+
Sbjct: 528 FNSLT-NRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPD 570
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 133/281 (47%), Gaps = 32/281 (11%)
Query: 72 WASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHACF 131
+ S++ Y + L + I +F M+ + PD + F + AC A G Q+H
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMN-SGISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 132 VLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAM 191
V + D V++SLV YA+CG ++AR VFD + +N VSWT+M+ YAR KDA+
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 192 EIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANF 251
++F F +R E V + + + ++ ACA
Sbjct: 221 DLF------------------------------FRMVRDEEV-TPNSVTMVCVISACAKL 249
Query: 252 AVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSII 311
LE G++++ + G E + +A+VDMY KC+ I AK +F ++ ++
Sbjct: 250 EDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMA 309
Query: 312 VGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHV 352
+ G E L +++ M+ +GV+P+ ++ + I +CS +
Sbjct: 310 SNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQL 350
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 111/211 (52%), Gaps = 4/211 (1%)
Query: 190 AMEIFEQA-PVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGAC 248
A E+FE + F++ +L+ G S +A F+ M G+ D + AC
Sbjct: 86 AKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGIS-PDKYTFPFGLSAC 144
Query: 249 ANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWT 308
A G QIHGL++ +GY LF+ N++V YA+C ++ +A+ +F M ++VVSWT
Sbjct: 145 AKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWT 204
Query: 309 SIIVGTAQHGQAEETLALYDEMV-SAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIE 367
S+I G A+ A++ + L+ MV V PN VT V +I AC+ + + G K++ + I
Sbjct: 205 SMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVY-AFIR 263
Query: 368 DYGITPSLQHYTCLLDLLSRSGHLDEAENLI 398
+ GI + + L+D+ + +D A+ L
Sbjct: 264 NSGIEVNDLMVSALVDMYMKCNAIDVAKRLF 294
Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 122/262 (46%), Gaps = 42/262 (16%)
Query: 7 LHRLRVCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKC--------------- 51
L + C++ + L K+ H +++ G + + N LID Y KC
Sbjct: 341 LSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN 400
Query: 52 ----------------DLVQYAHHLLEEMPQRDHVSWASILTAYNQANLPQKTISIFSTM 95
V A E MP+++ VSW +I++ Q +L ++ I +F +M
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSM 460
Query: 96 LALDKLQPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDDDVVKSSLVDMYAKCGL 155
+ + + D S+ ACG LGA L K ++ + D + ++LVDM+++CG
Sbjct: 461 QSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGD 520
Query: 156 PNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVRNL-----FLWTALVS 210
P +A ++F+S+ ++ +WTA + A A +G + A+E+F+ + L AL +
Sbjct: 521 PESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTA 580
Query: 211 ----GLVQSRNEIDAFYSFIEM 228
GLVQ EI FYS +++
Sbjct: 581 CSHGGLVQQGKEI--FYSMLKL 600
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 420 bits (1080), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/593 (36%), Positives = 347/593 (58%), Gaps = 9/593 (1%)
Query: 22 VKTLHAQIIK--LGLHQYGPLPN-TLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTA 78
V +HA I++ L LH P+ N L AY ++++ L + D + + +
Sbjct: 45 VLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINT 104
Query: 79 YNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCD 138
+ L + ++ +L+ ++ P+ F F+SL+K+C +T+ GK +H +
Sbjct: 105 ASINGLKDQAFLLYVQLLS-SEINPNEFTFSSLLKSC----STKSGKLIHTHVLKFGLGI 159
Query: 139 DDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAP 198
D V + LVD+YAK G +A+ VFD + ++ VS TAM++ YA+ G + A +F+
Sbjct: 160 DPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMC 219
Query: 199 VRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGK 258
R++ W ++ G Q DA F ++ EG D + + + + AC+ LE G+
Sbjct: 220 ERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGR 279
Query: 259 QIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHG 318
IH V + + + ++DMY+KC + A +F RKD+V+W ++I G A HG
Sbjct: 280 WIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHG 339
Query: 319 QAEETLALYDEMVS-AGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQH 377
+++ L L++EM G++P ++TF+G + AC+H GLV +G ++F+SM ++YGI P ++H
Sbjct: 340 YSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEH 399
Query: 378 YTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKHHRNTEMGTRVANHLLSLK 437
Y CL+ LL R+G L A IK M + D W+++L +CK H + +G +A +L+ L
Sbjct: 400 YGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLN 459
Query: 438 PEDPSSYILLSNVYASAAMWQHVSKVRKLMSVMEVKKEPGYSYIEFGKGSHIFYAGETSH 497
++ Y+LLSN+YAS ++ V+KVR LM + KEPG S IE H F AG+ H
Sbjct: 460 IKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREH 519
Query: 498 PLKDEIFELLTELDAEMKRRGYVPDTSSVLHDMEQKEKERQLFWHSERLAVAYGLLKSVP 557
EI+ +L ++ +K GYVP+T++VL D+E+ EKE+ L HSERLA+AYGL+ + P
Sbjct: 520 SKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKP 579
Query: 558 GTVLRVVKNLRVCGDCHIVMKMISRITKREIVVRDATRYHHFKDGKCSCNDFW 610
G+ L++ KNLRVC DCH V K+IS+IT R+IV+RD R+HHF DG CSC DFW
Sbjct: 580 GSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 420 bits (1080), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/587 (36%), Positives = 338/587 (57%), Gaps = 38/587 (6%)
Query: 25 LHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQANL 84
+H+ K G + + + I Y KC ++ L E + D V++ +++ Y
Sbjct: 243 IHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGE 302
Query: 85 PQKTISIFST-MLALDKLQPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDDDVVK 143
+ ++S+F ML+ +L+ V SLV G L L +H + S F V
Sbjct: 303 TELSLSLFKELMLSGARLRSSTLV--SLVPVSGHL---MLIYAIHGYCLKSNFLSHASVS 357
Query: 144 SSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVRNLF 203
++L +Y+K +AR ++F+++P ++L
Sbjct: 358 TALTTVYSKLNEIESAR-------------------------------KLFDESPEKSLP 386
Query: 204 LWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIHGL 263
W A++SG Q+ DA F EM++ +P+ ++ I+ ACA L LGK +H L
Sbjct: 387 SWNAMISGYTQNGLTEDAISLFREMQKSEFS-PNPVTITCILSACAQLGALSLGKWVHDL 445
Query: 264 VIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEET 323
V + +ES +++S A++ MYAKC I A+ +F M +K+ V+W ++I G HGQ +E
Sbjct: 446 VRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEA 505
Query: 324 LALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCLLD 383
L ++ EM+++G+ P VTF+ ++YACSH GLV +G ++F SMI YG PS++HY C++D
Sbjct: 506 LNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVD 565
Query: 384 LLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKHHRNTEMGTRVANHLLSLKPEDPSS 443
+L R+GHL A I+AM EP W LL AC+ H++T + V+ L L P++
Sbjct: 566 ILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGY 625
Query: 444 YILLSNVYASAAMWQHVSKVRKLMSVMEVKKEPGYSYIEFGKGSHIFYAGETSHPLKDEI 503
++LLSN++++ + + VR+ ++ K PGY+ IE G+ H+F +G+ SHP EI
Sbjct: 626 HVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEI 685
Query: 504 FELLTELDAEMKRRGYVPDTSSVLHDMEQKEKERQLFWHSERLAVAYGLLKSVPGTVLRV 563
+E L +L+ +M+ GY P+T LHD+E++E+E + HSERLA+A+GL+ + PGT +R+
Sbjct: 686 YEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRI 745
Query: 564 VKNLRVCGDCHIVMKMISRITKREIVVRDATRYHHFKDGKCSCNDFW 610
+KNLRVC DCH V K+IS+IT+R IVVRDA R+HHFKDG CSC D+W
Sbjct: 746 IKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 126 bits (316), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/398 (21%), Positives = 174/398 (43%), Gaps = 37/398 (9%)
Query: 23 KTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQA 82
+ +H Q + G L + ++ Y K V+ A + + MP++D + W ++++ Y +
Sbjct: 139 RVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKN 198
Query: 83 NLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDDDVV 142
+ ++I +F ++ + D ++ A L RLG Q+H+ + D V
Sbjct: 199 EMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYV 258
Query: 143 KSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVRNL 202
+ + +Y+KCG A+F + + V++ AM+ Y +G + ++ +F++ +
Sbjct: 259 LTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGA 318
Query: 203 FLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIHG 262
L ++ + LV + Y+ IHG
Sbjct: 319 RLRSSTLVSLVPVSGHLMLIYA-----------------------------------IHG 343
Query: 263 LVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEE 322
+ + S +S A+ +Y+K ++I +A+ +F K + SW ++I G Q+G E+
Sbjct: 344 YCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTED 403
Query: 323 TLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCLL 382
++L+ EM + PN VT ++ AC+ +G + G K ++ S+ T L+
Sbjct: 404 AISLFREMQKSEFSPNPVTITCILSACAQLGALSLG-KWVHDLVRSTDFESSIYVSTALI 462
Query: 383 DLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKHH 420
+ ++ G + EA L M + +E TW ++S H
Sbjct: 463 GMYAKCGSIAEARRLFDLMT-KKNEVTWNTMISGYGLH 499
Score = 122 bits (306), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 109/499 (21%), Positives = 202/499 (40%), Gaps = 75/499 (15%)
Query: 26 HAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQANLP 85
HAQII G L L + YA + + + D + ++ ++ P
Sbjct: 40 HAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESP 99
Query: 86 QKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDDDVV-KS 144
++S+F+ + L+P+ +A + A R G+ +H V+ CD +++ S
Sbjct: 100 HSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDG-CDSELLLGS 158
Query: 145 SLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVRNLFL 204
++V MY K W R +DA ++F++ P ++ L
Sbjct: 159 NIVKMYFKF--------------------W-----------RVEDARKVFDRMPEKDTIL 187
Query: 205 WTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIHGLV 264
W ++SG ++ +++ F ++ E +D L I+ A A L LG QIH L
Sbjct: 188 WNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLA 247
Query: 265 IALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEETL 324
G S ++ + +Y+KC I +F R+ D+V++ ++I G +G+ E +L
Sbjct: 248 TKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSL 307
Query: 325 ALYDEMVSAGVKPNEVTFVGLIYACSHVGL------------------------------ 354
+L+ E++ +G + T V L+ H+ L
Sbjct: 308 SLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKL 367
Query: 355 --VGKGRKLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAM---PFEPDEPT 409
+ RKLF D SL + ++ +++G ++A +L + M F P+ T
Sbjct: 368 NEIESARKLF-----DESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVT 422
Query: 410 WAALLSACKHHRNTEMGTRVANHLLSLKPEDPSSYILLSNVYASAAMWQHVSKVRKLMSV 469
+LSAC +G V H L + SS + + + A +++ R+L +
Sbjct: 423 ITCILSACAQLGALSLGKWV--HDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDL 480
Query: 470 MEVKKEPGYSYIEFGKGSH 488
M K E ++ + G G H
Sbjct: 481 MTKKNEVTWNTMISGYGLH 499
Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 101/209 (48%), Gaps = 10/209 (4%)
Query: 20 LTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAY 79
+ + +H +K + + L Y K + ++ A L +E P++ SW ++++ Y
Sbjct: 336 MLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGY 395
Query: 80 NQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDD 139
Q L + IS+F M + P+ ++ AC LGA LGK VH + F
Sbjct: 396 TQNGLTEDAISLFREMQK-SEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESS 454
Query: 140 DVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQ--- 196
V ++L+ MYAKCG AR +FD + KN V+W M+S Y G+ ++A+ IF +
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLN 514
Query: 197 -----APVRNL-FLWTALVSGLVQSRNEI 219
PV L L+ +GLV+ +EI
Sbjct: 515 SGITPTPVTFLCVLYACSHAGLVKEGDEI 543
Score = 39.7 bits (91), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 6/168 (3%)
Query: 259 QIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHG 318
Q H +I G+ + + + + + I A+DIF ++R DV + ++ G + +
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 319 QAEETLALYDEM-VSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQH 377
+L+++ + S +KPN T+ I A S GR + + D G L
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVD-GCDSELLL 156
Query: 378 YTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKHHRNTEM 425
+ ++ + + +++A + MP E D W ++S +R EM
Sbjct: 157 GSNIVKMYFKFWRVEDARKVFDRMP-EKDTILWNTMISG---YRKNEM 200
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 417 bits (1073), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/601 (35%), Positives = 342/601 (56%), Gaps = 33/601 (5%)
Query: 10 LRVCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDH 69
L++CAR+ + K H +II++ L L N LI+AY KC V+ A + + M +R
Sbjct: 68 LQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSL 127
Query: 70 VSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHA 129
VSW +++ Y + + + + IF M + + F +S++ ACG K++H
Sbjct: 128 VSWNTMIGLYTRNRMESEALDIFLEMRN-EGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 130 CFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKD 189
V + +D+ G TA+L YA+ G KD
Sbjct: 187 LSV-----------KTCIDLNLYVG--------------------TALLDLYAKCGMIKD 215
Query: 190 AMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACA 249
A+++FE ++ W+++V+G VQ++N +A + +R ++ + LSS++ AC+
Sbjct: 216 AVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLE-QNQFTLSSVICACS 274
Query: 250 NFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTS 309
N A L GKQ+H ++ G+ S +F++++ VDMYAKC + + IF ++ K++ W +
Sbjct: 275 NLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNT 334
Query: 310 IIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDY 369
II G A+H + +E + L+++M G+ PNEVTF L+ C H GLV +GR+ FK M Y
Sbjct: 335 IISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTY 394
Query: 370 GITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKHHRNTEMGTRV 429
G++P++ HY+C++D+L R+G L EA LIK++PF+P W +LL++C+ ++N E+
Sbjct: 395 GLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVA 454
Query: 430 ANHLLSLKPEDPSSYILLSNVYASAAMWQHVSKVRKLMSVMEVKKEPGYSYIEFGKGSHI 489
A L L+PE+ +++LLSN+YA+ W+ ++K RKL+ +VKK G S+I+ H
Sbjct: 455 AEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHT 514
Query: 490 FYAGETSHPLKDEIFELLTELDAEMKRRGYVPDTSSVLHDMEQKEKERQLFWHSERLAVA 549
F GE+ HP EI L L + ++ GY P LHD+E +KE L HSE+LA+
Sbjct: 515 FSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALV 574
Query: 550 YGLLKSVPGTVLRVVKNLRVCGDCHIVMKMISRITKREIVVRDATRYHHFKDGKCSCNDF 609
+GL+ + +R++KNLR+C DCH MK S T+R I+VRD R+HHF DG CSC DF
Sbjct: 575 FGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDF 634
Query: 610 W 610
W
Sbjct: 635 W 635
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 91/182 (50%), Gaps = 4/182 (2%)
Query: 244 IVGACA-NFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRK 302
I+ CA N AV+E K HG +I + E + + N +++ Y+KC + A+ +F M +
Sbjct: 67 ILQLCARNGAVME-AKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLER 125
Query: 303 DVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLF 362
+VSW ++I ++ E L ++ EM + G K +E T ++ AC V K
Sbjct: 126 SLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACG-VNCDALECKKL 184
Query: 363 KSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKHHRN 422
+ I +L T LLDL ++ G + +A + ++M + TW+++++ ++N
Sbjct: 185 HCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ-DKSSVTWSSMVAGYVQNKN 243
Query: 423 TE 424
E
Sbjct: 244 YE 245
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 416 bits (1070), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/595 (36%), Positives = 334/595 (56%), Gaps = 43/595 (7%)
Query: 25 LHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQANL 84
+H +K+G + N+L+D Y KC + A + + R +SW +++ + A
Sbjct: 129 IHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGY 188
Query: 85 PQKTISIFSTMLALD-KLQPDHFVFASLVKACGSLGATRLGKQVHACFVLSPF-CDDD-V 141
K + F M + K +PD F SL+KAC S G GKQ+H V S F C
Sbjct: 189 GSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSAT 248
Query: 142 VKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVRN 201
+ SLVD+Y KCG +AR FD IK K +SW++++ YA+ G +AM +F++
Sbjct: 249 ITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKR----- 303
Query: 202 LFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIH 261
L + ++ID+F LSSI+G A+FA+L GKQ+
Sbjct: 304 ----------LQELNSQIDSF-----------------ALSSIIGVFADFALLRQGKQMQ 336
Query: 262 GLVIAL--GYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQ 319
L + L G E+ + N++VDMY KC + A+ F M+ KDV+SWT +I G +HG
Sbjct: 337 ALAVKLPSGLETSVL--NSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGL 394
Query: 320 AEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHYT 379
++++ ++ EM+ ++P+EV ++ ++ ACSH G++ +G +LF ++E +GI P ++HY
Sbjct: 395 GKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYA 454
Query: 380 CLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKHHRNTEMGTRVANHLLSLKPE 439
C++DLL R+G L EA++LI MP +P+ W LLS C+ H + E+G V LL + +
Sbjct: 455 CVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAK 514
Query: 440 DPSSYILLSNVYASAAMWQHVSKVRKLMSVMEVKKEPGYSYIEFGKGSHIFYAGETSHPL 499
+P++Y+++SN+Y A W R+L ++ +KKE G S++E + H F +GE SHPL
Sbjct: 515 NPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPL 574
Query: 500 KDEIFELLTELDAEMKRR-GYVPDTSSVLHDMEQKEKERQLFWHSERLAVAYGLLK---S 555
I E L E + ++ GYV LHD++ + KE L HSE+LA+ L +
Sbjct: 575 TPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLN 634
Query: 556 VPGTVLRVVKNLRVCGDCHIVMKMISRITKREIVVRDATRYHHFKDGKCSCNDFW 610
G +RV KNLRVC DCH +K +S+ITK VVRDA R+H F+DG CSC D+W
Sbjct: 635 QKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 150/311 (48%), Gaps = 38/311 (12%)
Query: 108 FASLVKACGSLGATRLGKQVHACFVLSPFCDDDVVKSS-LVDMYAKCGLPNNARAVFDSI 166
S+++ C G + G QVH C++L +++ S+ L+DMY KC P A VFDS+
Sbjct: 9 LVSILRVCTRKGLSDQGGQVH-CYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 167 KLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFI 226
+N VSW+A++S + +G K ++ +F
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFS------------------------------- 96
Query: 227 EMRREGVDIVDPLVLSSIVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKC 286
EM R+G+ + S+ + AC LE G QIHG + +G+E + + N++VDMY+KC
Sbjct: 97 EMGRQGI-YPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKC 155
Query: 287 SDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVK--PNEVTFVG 344
I A+ +F R+ + ++SW ++I G G + L + M A +K P+E T
Sbjct: 156 GRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTS 215
Query: 345 LIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHYT-CLLDLLSRSGHLDEAENLIKAMPF 403
L+ ACS G++ G+++ ++ PS T L+DL + G+L A +
Sbjct: 216 LLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK- 274
Query: 404 EPDEPTWAALL 414
E +W++L+
Sbjct: 275 EKTMISWSSLI 285
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 143/322 (44%), Gaps = 49/322 (15%)
Query: 10 LRVCARHQIALTVKTLHAQIIKLGLH--QYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQR 67
L+ C+ + K +H +++ G H + +L+D Y KC + A +++ ++
Sbjct: 217 LKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEK 276
Query: 68 DHVSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQV 127
+SW+S++ Y Q + + +F + L+ Q D F +S++ R GKQ+
Sbjct: 277 TMISWSSLILGYAQEGEFVEAMGLFKRLQELNS-QIDSFALSSIIGVFADFALLRQGKQM 335
Query: 128 HACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRK 187
A V P + V +S+VDMY KCGL + A F ++LK+ +SWT +++ Y + G
Sbjct: 336 QALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLG 395
Query: 188 KDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGA 247
K ++ I F EM R ++ D + +++ A
Sbjct: 396 KKSVRI-------------------------------FYEMLRHNIE-PDEVCYLAVLSA 423
Query: 248 CANFAVLELGKQI-------HGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMR 300
C++ +++ G+++ HG+ + + +C +VD+ + + AK + M
Sbjct: 424 CSHSGMIKEGEELFSKLLETHGIKPRVEHYAC------VVDLLGRAGRLKEAKHLIDTMP 477
Query: 301 RK-DVVSWTSIIVGTAQHGQAE 321
K +V W +++ HG E
Sbjct: 478 IKPNVGIWQTLLSLCRVHGDIE 499
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 95/179 (53%), Gaps = 2/179 (1%)
Query: 241 LSSIVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMR 300
L SI+ C + + G Q+H ++ G L SN ++DMY KC + + A +F M
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 301 RKDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRK 360
++VVSW++++ G +G + +L+L+ EM G+ PNE TF + AC + + KG +
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128
Query: 361 LFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKH 419
+ ++ G ++ L+D+ S+ G ++EAE + + + + +W A+++ H
Sbjct: 129 IHGFCLK-IGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI-VDRSLISWNAMIAGFVH 185
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 416 bits (1068), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/598 (34%), Positives = 336/598 (56%), Gaps = 32/598 (5%)
Query: 13 CARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSW 72
CA ++ + +H+ +K + NTL+D Y KC + A + EM R VS+
Sbjct: 306 CADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSY 365
Query: 73 ASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHACFV 132
S++ Y + L + + +F M + + PD + +++ C GK+VH
Sbjct: 366 TSMIAGYAREGLAGEAVKLFEEMEE-EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIK 424
Query: 133 LSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAME 192
+ D V ++L+DMYAKCG A VF +++K+ +SW ++ Y+++ +A+
Sbjct: 425 ENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALS 484
Query: 193 IFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFA 252
+F NL L S D ++ ++ ACA+ +
Sbjct: 485 LF------NLLLEEKRFS-------------------------PDERTVACVLPACASLS 513
Query: 253 VLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIV 312
+ G++IHG ++ GY S ++N++VDMYAKC ++ A +F + KD+VSWT +I
Sbjct: 514 AFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIA 573
Query: 313 GTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGIT 372
G HG +E +AL+++M AG++ +E++FV L+YACSH GLV +G + F M + I
Sbjct: 574 GYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIE 633
Query: 373 PSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKHHRNTEMGTRVANH 432
P+++HY C++D+L+R+G L +A I+ MP PD W ALL C+ H + ++ +VA
Sbjct: 634 PTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEK 693
Query: 433 LLSLKPEDPSSYILLSNVYASAAMWQHVSKVRKLMSVMEVKKEPGYSYIEFGKGSHIFYA 492
+ L+PE+ Y+L++N+YA A W+ V ++RK + ++K PG S+IE +IF A
Sbjct: 694 VFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVA 753
Query: 493 GETSHPLKDEIFELLTELDAEMKRRGYVPDTSSVLHDMEQKEKERQLFWHSERLAVAYGL 552
G++S+P + I L ++ A M GY P T L D E+ EKE L HSE+LA+A G+
Sbjct: 754 GDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGI 813
Query: 553 LKSVPGTVLRVVKNLRVCGDCHIVMKMISRITKREIVVRDATRYHHFKDGKCSCNDFW 610
+ S G ++RV KNLRVCGDCH + K +S++T+REIV+RD+ R+H FKDG CSC FW
Sbjct: 814 ISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 102/448 (22%), Positives = 202/448 (45%), Gaps = 37/448 (8%)
Query: 10 LRVCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDH 69
L++CA + K + I G L + L Y C ++ A + +E+
Sbjct: 101 LQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKA 160
Query: 70 VSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHA 129
+ W ++ ++ +I +F M++ ++ D + F+ + K+ SL + G+Q+H
Sbjct: 161 LFWNILMNELAKSGDFSGSIGLFKKMMS-SGVEMDSYTFSCVSKSFSSLRSVHGGEQLHG 219
Query: 130 CFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKD 189
+ S F + + V +SLV Y LKN R
Sbjct: 220 FILKSGFGERNSVGNSLVAFY-----------------LKNQ--------------RVDS 248
Query: 190 AMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACA 249
A ++F++ R++ W ++++G V + F++M G++I D + S+ CA
Sbjct: 249 ARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEI-DLATIVSVFAGCA 307
Query: 250 NFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTS 309
+ ++ LG+ +H + + + N ++DMY+KC D+ +AK +F M + VVS+TS
Sbjct: 308 DSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTS 367
Query: 310 IIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIE-D 368
+I G A+ G A E + L++EM G+ P+ T ++ C+ L+ +G+++ + + E D
Sbjct: 368 MIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEND 427
Query: 369 YGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKHHRNTEMGTR 428
G + + L+D+ ++ G + EAE + M + D +W ++ +
Sbjct: 428 LGFDIFVSN--ALMDMYAKCGSMQEAELVFSEMRVK-DIISWNTIIGGYSKNCYANEALS 484
Query: 429 VANHLLSLKPEDPSSYILLSNVYASAAM 456
+ N LL K P + + A A++
Sbjct: 485 LFNLLLEEKRFSPDERTVACVLPACASL 512
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 143/310 (46%), Gaps = 34/310 (10%)
Query: 10 LRVCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDH 69
L CAR+++ K +H I + L + N L+D Y KC +Q A + EM +D
Sbjct: 404 LNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDI 463
Query: 70 VSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHA 129
+SW +I+ Y++ + +S+F+ +L + PD A ++ AC SL A G+++H
Sbjct: 464 ISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHG 523
Query: 130 CFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKD 189
+ + + D V +SLVDMYAKCG A +FD I K+ VSWT M++ Y G K+
Sbjct: 524 YIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKE 583
Query: 190 AMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACA 249
A+ +F Q MR+ G++ D + S++ AC+
Sbjct: 584 AIALFNQ-------------------------------MRQAGIE-ADEISFVSLLYACS 611
Query: 250 NFAVLELGKQIHGLVI-ALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMR-RKDVVSW 307
+ +++ G + ++ E + IVDM A+ D+I A M D W
Sbjct: 612 HSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIW 671
Query: 308 TSIIVGTAQH 317
+++ G H
Sbjct: 672 GALLCGCRIH 681
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 112/469 (23%), Positives = 190/469 (40%), Gaps = 97/469 (20%)
Query: 100 KLQPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNA 159
K D S+++ C + + GK+V + F D + S L MY CG A
Sbjct: 89 KWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEA 148
Query: 160 RAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEI 219
VFD +K++ ++ W +++ A+SG ++ +F++
Sbjct: 149 SRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKK----------------------- 185
Query: 220 DAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIHGLVIALGYESCLFISNAI 279
M GV++ D S + + ++ + G+Q+HG ++ G+ + N++
Sbjct: 186 --------MMSSGVEM-DSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSL 236
Query: 280 VDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNE 339
V Y K + +A+ +F M +DV+SW SII G +G AE+ L+++ +M+ +G++ +
Sbjct: 237 VAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDL 296
Query: 340 VTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITP--SLQHYTC--LLDLLSRSGHLDEAE 395
T V + C+ L+ GR + G+ S + C LLD+ S+ G LD A+
Sbjct: 297 ATIVSVFAGCADSRLISLGRA-----VHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAK 351
Query: 396 NLIKAMP--------------------------FE--------PDEPTWAALLSACKHHR 421
+ + M FE PD T A+L+ C +R
Sbjct: 352 AVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYR 411
Query: 422 NTEMGTRVANHLLSLKPEDPSSYILLSN----VYASAAMWQHVSKVRKLMSVMEVKKEPG 477
+ G RV +K D I +SN +YA Q V S M VK
Sbjct: 412 LLDEGKRVHEW---IKENDLGFDIFVSNALMDMYAKCGSMQEAELV---FSEMRVKDIIS 465
Query: 478 YSYIEFGKGSHIFYAGETSHPLKDEIFELLTELDAEMKRRGYVPDTSSV 526
++ I G S YA E +F LL E + + PD +V
Sbjct: 466 WNTI-IGGYSKNCYANEAL-----SLFNLLLE------EKRFSPDERTV 502
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 415 bits (1067), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/627 (35%), Positives = 350/627 (55%), Gaps = 62/627 (9%)
Query: 42 NTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQAN-----------LPQKTIS 90
N L+ Y K + A + + MP+R+ VSW +++ Y +P+K
Sbjct: 83 NGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKV 142
Query: 91 IFSTML-------------ALDKLQPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFC 137
++ ML L ++ PD ++ + G + G+ A +
Sbjct: 143 SWTVMLIGFLQDGRIDDACKLYEMIPDK---DNIARTSMIHGLCKEGRVDEAREIFDEMS 199
Query: 138 DDDVVK-SSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQ 196
+ V+ +++V Y + ++AR +FD + K VSWT+ML Y ++GR +DA E+FE
Sbjct: 200 ERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEV 259
Query: 197 APVRNLFLWTALVSGLVQ-----------------------------SRN--EIDAFYSF 225
PV+ + A++SGL Q RN E++A F
Sbjct: 260 MPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLF 319
Query: 226 IEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAK 285
I M+++GV P ++S I+ CA+ A L GKQ+H ++ ++ +++++ ++ MY K
Sbjct: 320 ILMQKQGVRPTFPTLIS-ILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIK 378
Query: 286 CSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLALYDEM-VSAGVKPNEVTFVG 344
C +++ +K IF R KD++ W SII G A HG EE L ++ EM +S KPNEVTFV
Sbjct: 379 CGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVA 438
Query: 345 LIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFE 404
+ ACS+ G+V +G K+++SM +G+ P HY C++D+L R+G +EA +I +M E
Sbjct: 439 TLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVE 498
Query: 405 PDEPTWAALLSACKHHRNTEMGTRVANHLLSLKPEDPSSYILLSNVYASAAMWQHVSKVR 464
PD W +LL AC+ H ++ A L+ ++PE+ +YILLSN+YAS W V+++R
Sbjct: 499 PDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELR 558
Query: 465 KLMSVMEVKKEPGYSYIEFGKGSHIFY-AGETSHPLKDEIFELLTELDAEMKRRGYVPDT 523
KLM V+K PG S+ E H F G SHP ++ I ++L ELD ++ GY PD
Sbjct: 559 KLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDC 618
Query: 524 SSVLHDMEQKEKERQLFWHSERLAVAYGLLKSVPGTVLRVVKNLRVCGDCHIVMKMISRI 583
S LHD++++EK L +HSERLAVAY LLK G +RV+KNLRVC DCH +K+IS++
Sbjct: 619 SYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKV 678
Query: 584 TKREIVVRDATRYHHFKDGKCSCNDFW 610
+REI++RDA R+HHF++G+CSC D+W
Sbjct: 679 KEREIILRDANRFHHFRNGECSCKDYW 705
Score = 99.8 bits (247), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 152/345 (44%), Gaps = 45/345 (13%)
Query: 121 TRLGKQVHACFVLSPFCDDDVVKS--SLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAML 178
+R+GK +H L CD + S S+V Y +P +AR +FD + +N +SW ++
Sbjct: 28 SRIGK-IHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLV 86
Query: 179 SAYARSGRKKDAMEIFEQAPVRNLFLWTALVSGLVQS---------------RNEIDAFY 223
S Y ++G +A ++F+ P RN+ WTALV G V + +N++
Sbjct: 87 SGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTV 146
Query: 224 SFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIHGL-----------VIALGYESC 272
I ++G I D L ++ N A + IHGL + E
Sbjct: 147 MLIGFLQDG-RIDDACKLYEMIPDKDNIARTSM---IHGLCKEGRVDEAREIFDEMSERS 202
Query: 273 LFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLALYDEMVS 332
+ +V Y + + + A+ IF M K VSWTS+++G Q+G+ E+ L++ M
Sbjct: 203 VITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVM-- 260
Query: 333 AGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLD 392
VKP + +I G + K R++F SM E + + ++ + R+G
Sbjct: 261 -PVKP-VIACNAMISGLGQKGEIAKARRVFDSMKERNDAS-----WQTVIKIHERNGFEL 313
Query: 393 EAENLIKAMP---FEPDEPTWAALLSACKHHRNTEMGTRVANHLL 434
EA +L M P PT ++LS C + G +V L+
Sbjct: 314 EALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLV 358
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 79/176 (44%), Gaps = 8/176 (4%)
Query: 10 LRVCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDH 69
L VCA K +HAQ+++ + + L+ Y KC + + + + P +D
Sbjct: 338 LSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDI 397
Query: 70 VSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVH- 128
+ W SI++ Y L ++ + +F M +P+ F + + AC G G +++
Sbjct: 398 IMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYE 457
Query: 129 ---ACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLK-NSVSWTAMLSA 180
+ F + P + +VDM + G N A + DS+ ++ ++ W ++L A
Sbjct: 458 SMESVFGVKPIT---AHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGA 510
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 10/139 (7%)
Query: 276 SNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGV 335
+N + ++ I A+ +F K + SW S++ G + + L+DEM +
Sbjct: 20 ANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNI 79
Query: 336 KPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAE 395
+++ GL+ G + + RK+F M E ++ +T L+ +G +D AE
Sbjct: 80 ----ISWNGLVSGYMKNGEIDEARKVFDLMPERNVVS-----WTALVKGYVHNGKVDVAE 130
Query: 396 NLIKAMPFEPDEPTWAALL 414
+L MP E ++ +W +L
Sbjct: 131 SLFWKMP-EKNKVSWTVML 148
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 415 bits (1067), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/590 (37%), Positives = 331/590 (56%), Gaps = 36/590 (6%)
Query: 23 KTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQA 82
K +H QI+K + L+ Y + + A + EMP+ D V W+ ++ + Q
Sbjct: 267 KGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQN 326
Query: 83 NLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDDDVV 142
+ + +F M + P+ F +S++ C + LG+Q+H V F D V
Sbjct: 327 GFCNEAVDLFIRMREA-FVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYV 385
Query: 143 KSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVRNL 202
++L+D+YAKC + A +F + KN VSW ++ Y G A +F +A
Sbjct: 386 SNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREAL---- 441
Query: 203 FLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIHG 262
RN++ V + SS +GACA+ A ++LG Q+HG
Sbjct: 442 -------------RNQVS---------------VTEVTFSSALGACASLASMDLGVQVHG 473
Query: 263 LVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEE 322
L I + +SN+++DMYAKC DI A+ +F M DV SW ++I G + HG +
Sbjct: 474 LAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQ 533
Query: 323 TLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCLL 382
L + D M KPN +TF+G++ CS+ GL+ +G++ F+SMI D+GI P L+HYTC++
Sbjct: 534 ALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMV 593
Query: 383 DLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKHHRNTEMGTRVANHLLSLKPEDPS 442
LL RSG LD+A LI+ +P+EP W A+LSA + N E R A +L + P+D +
Sbjct: 594 RLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEA 653
Query: 443 SYILLSNVYASAAMWQHVSKVRKLMSVMEVKKEPGYSYIEFGKGSHIFYAGETSHPLKDE 502
+Y+L+SN+YA A W +V+ +RK M M VKKEPG S+IE H F G + HP
Sbjct: 654 TYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKL 713
Query: 503 IFELLTELDAEMKRRGYVPDTSSVLHDMEQKEKERQLFWHSERLAVAYGLLKSVPGTVLR 562
I +L L+ + R GYVPD ++VL DM+ +EK+++L+ HSERLA+AYGL++ +P + R
Sbjct: 714 INGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVR-MPSSRNR 772
Query: 563 VV--KNLRVCGDCHIVMKMISRITKREIVVRDATRYHHFKDGKCSCNDFW 610
++ KNLR+C DCH MK+IS I +R++V+RD R+HHF G CSC D W
Sbjct: 773 ILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 190/401 (47%), Gaps = 45/401 (11%)
Query: 25 LHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQANL 84
LH+ I+KLG + LI+AY C V A + E + +D V WA I++ Y +
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227
Query: 85 PQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHA-----CFVLSPFCDD 139
+ ++ + S M + P+++ F + +KA LGA K VH C+VL P
Sbjct: 228 FEDSLKLLSCM-RMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDP---- 282
Query: 140 DVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPV 199
V L+ +Y + G ++A VF+ + + V W+ M++ + ++G +A+++
Sbjct: 283 -RVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDL------ 335
Query: 200 RNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQ 259
FI M RE + + LSSI+ CA LG+Q
Sbjct: 336 -------------------------FIRM-REAFVVPNEFTLSSILNGCAIGKCSGLGEQ 369
Query: 260 IHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQ 319
+HGLV+ +G++ +++SNA++D+YAKC + A +F + K+ VSW ++IVG G+
Sbjct: 370 LHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGE 429
Query: 320 AEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHYT 379
+ +++ E + V EVTF + AC+ + + G ++ I+ +
Sbjct: 430 GGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNN-AKKVAVSN 488
Query: 380 CLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKHH 420
L+D+ ++ G + A+++ M D +W AL+S H
Sbjct: 489 SLIDMYAKCGDIKFAQSVFNEME-TIDVASWNALISGYSTH 528
Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 95/186 (51%), Gaps = 1/186 (0%)
Query: 10 LRVCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDH 69
L CA + + + LH ++K+G + N LID Y KC+ + A L E+ ++
Sbjct: 355 LNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNE 414
Query: 70 VSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHA 129
VSW +++ Y K S+F L +++ F+S + AC SL + LG QVH
Sbjct: 415 VSWNTVIVGYENLGEGGKAFSMFREALR-NQVSVTEVTFSSALGACASLASMDLGVQVHG 473
Query: 130 CFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKD 189
+ + V +SL+DMYAKCG A++VF+ ++ + SW A++S Y+ G +
Sbjct: 474 LAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQ 533
Query: 190 AMEIFE 195
A+ I +
Sbjct: 534 ALRILD 539
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 128/265 (48%), Gaps = 13/265 (4%)
Query: 156 PNNARAVFDSIKLKNSV----SWTAMLSAYARSGRKKDAMEIFEQAPVRNLFLWTALVSG 211
P +A+A+ I K S + +L+AY ++G KDA+ +F++ P RN + L G
Sbjct: 65 PISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQG 124
Query: 212 LVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIHGLVIALGYES 271
D + + REG ++ +P V +S + + E+ +H ++ LGY+S
Sbjct: 125 YACQ----DPIGLYSRLHREGHEL-NPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDS 179
Query: 272 CLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLALYDEMV 331
F+ A+++ Y+ C + +A+ +F + KD+V W I+ ++G E++L L M
Sbjct: 180 NAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMR 239
Query: 332 SAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIED-YGITPSLQHYTCLLDLLSRSGH 390
AG PN TF + A +G + + +++ Y + P + LL L ++ G
Sbjct: 240 MAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVG--VGLLQLYTQLGD 297
Query: 391 LDEAENLIKAMPFEPDEPTWAALLS 415
+ +A + MP + D W+ +++
Sbjct: 298 MSDAFKVFNEMP-KNDVVPWSFMIA 321
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 414 bits (1063), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/605 (34%), Positives = 348/605 (57%), Gaps = 9/605 (1%)
Query: 10 LRVCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLID---AYGKCDLVQYAHHLLEEMPQ 66
L+ C++ + +K +HA+++K GL Q + + D + YA + + +
Sbjct: 21 LQRCSKQE---ELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDR 77
Query: 67 RDHVSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQ 126
D W ++ ++ ++ P++++ ++ ML + + F SL+KAC +L A Q
Sbjct: 78 PDTFLWNLMIRGFSCSDEPERSLLLYQRMLC-SSAPHNAYTFPSLLKACSNLSAFEETTQ 136
Query: 127 VHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGR 186
+HA + +D +SL++ YA G A +FD I + VSW +++ Y ++G+
Sbjct: 137 IHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGK 196
Query: 187 KKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVG 246
A+ +F + +N WT ++SG VQ+ +A F EM+ V+ D + L++ +
Sbjct: 197 MDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVE-PDNVSLANALS 255
Query: 247 ACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVS 306
ACA LE GK IH + + ++DMYAKC ++ A ++F +++K V +
Sbjct: 256 ACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQA 315
Query: 307 WTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMI 366
WT++I G A HG E ++ + EM G+KPN +TF ++ ACS+ GLV +G+ +F SM
Sbjct: 316 WTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSME 375
Query: 367 EDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKHHRNTEMG 426
DY + P+++HY C++DLL R+G LDEA+ I+ MP +P+ W ALL AC+ H+N E+G
Sbjct: 376 RDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELG 435
Query: 427 TRVANHLLSLKPEDPSSYILLSNVYASAAMWQHVSKVRKLMSVMEVKKEPGYSYIEFGKG 486
+ L+++ P Y+ +N++A W ++ R+LM V K PG S I
Sbjct: 436 EEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGT 495
Query: 487 SHIFYAGETSHPLKDEIFELLTELDAEMKRRGYVPDTSSVLHDM-EQKEKERQLFWHSER 545
+H F AG+ SHP ++I + +++ GYVP+ +L D+ + E+E + HSE+
Sbjct: 496 THEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEK 555
Query: 546 LAVAYGLLKSVPGTVLRVVKNLRVCGDCHIVMKMISRITKREIVVRDATRYHHFKDGKCS 605
LA+ YGL+K+ PGT++R++KNLRVC DCH V K+IS+I KR+IV+RD TR+HHF+DGKCS
Sbjct: 556 LAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCS 615
Query: 606 CNDFW 610
C D+W
Sbjct: 616 CGDYW 620
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 410 bits (1054), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/604 (35%), Positives = 339/604 (56%), Gaps = 39/604 (6%)
Query: 10 LRVCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDH 69
L+ C R LH+ ++K G + +L+ Y + AH L +E+P R
Sbjct: 118 LKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSV 177
Query: 70 VSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHA 129
V+W ++ + Y + ++ I +F M+ + ++PD + ++ AC +G G+ +
Sbjct: 178 VTWTALFSGYTTSGRHREAIDLFKKMVEMG-VKPDSYFIVQVLSACVHVGDLDSGEWIVK 236
Query: 130 CFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKD 189
+ V+++LV++YAKCG AR+VFDS+ K+ V+W+ M+ YA + K+
Sbjct: 237 YMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKE 296
Query: 190 AMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVG--- 246
+E+F Q NL + D F SIVG
Sbjct: 297 GIELFLQMLQENL---------------KPDQF--------------------SIVGFLS 321
Query: 247 ACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVS 306
+CA+ L+LG+ L+ + + LF++NA++DMYAKC + ++F M+ KD+V
Sbjct: 322 SCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVI 381
Query: 307 WTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMI 366
+ I G A++G + + A++ + G+ P+ TF+GL+ C H GL+ G + F ++
Sbjct: 382 MNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAIS 441
Query: 367 EDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKHHRNTEMG 426
Y + +++HY C++DL R+G LD+A LI MP P+ W ALLS C+ ++T++
Sbjct: 442 CVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLA 501
Query: 427 TRVANHLLSLKPEDPSSYILLSNVYASAAMWQHVSKVRKLMSVMEVKKEPGYSYIEFGKG 486
V L++L+P + +Y+ LSN+Y+ W ++VR +M+ +KK PGYS+IE
Sbjct: 502 ETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGK 561
Query: 487 SHIFYAGETSHPLKDEIFELLTELDAEMKRRGYVPDTSSVLHDMEQKEKERQLFWHSERL 546
H F A + SHPL D+I+ L +L EM+ G+VP T V D+E++EKER L +HSE+L
Sbjct: 562 VHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKL 621
Query: 547 AVAYGLLKSVPGTVLRVVKNLRVCGDCHIVMKMISRITKREIVVRDATRYHHFKDGKCSC 606
AVA GL+ + G V+RVVKNLRVCGDCH VMK+IS+IT+REIVVRD R+H F +G CSC
Sbjct: 622 AVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSC 681
Query: 607 NDFW 610
ND+W
Sbjct: 682 NDYW 685
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 181/385 (47%), Gaps = 44/385 (11%)
Query: 22 VKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQ 81
+K +H +I LH L N L+ +Y++ L + + S++ +
Sbjct: 29 LKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVN 88
Query: 82 ANLPQKTISIFSTMLALDK--LQPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDD 139
+L +T+ +F L++ K L F F ++KAC + +LG +H+ V
Sbjct: 89 NHLFHETLDLF---LSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVV------- 138
Query: 140 DVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPV 199
KCG ++ A+ T++LS Y+ SGR DA ++F++ P
Sbjct: 139 ------------KCGFNHDVAAM------------TSLLSIYSGSGRLNDAHKLFDEIPD 174
Query: 200 RNLFLWTALVSGLVQS---RNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLEL 256
R++ WTAL SG S R ID F +EM GV D + ++ AC + L+
Sbjct: 175 RSVVTWTALFSGYTTSGRHREAIDLFKKMVEM---GVK-PDSYFIVQVLSACVHVGDLDS 230
Query: 257 GKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQ 316
G+ I + + + F+ +V++YAKC + A+ +F M KD+V+W+++I G A
Sbjct: 231 GEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYAS 290
Query: 317 HGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQ 376
+ +E + L+ +M+ +KP++ + VG + +C+ +G + G + S+I+ + +L
Sbjct: 291 NSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLG-EWGISLIDRHEFLTNLF 349
Query: 377 HYTCLLDLLSRSGHLDEAENLIKAM 401
L+D+ ++ G + + K M
Sbjct: 350 MANALIDMYAKCGAMARGFEVFKEM 374
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 410 bits (1054), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/559 (38%), Positives = 322/559 (57%), Gaps = 36/559 (6%)
Query: 54 VQYAHHLLEEMPQRDHVSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVK 113
+ YA HL E M + D V + S+ Y++ P + S+F +L D + PD++ F SL+K
Sbjct: 79 MSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILE-DGILPDNYTFPSLLK 137
Query: 114 ACGSLGATRLGKQVHACFVLSPFCDDDV-VKSSLVDMYAKCGLPNNARAVFDSIKLKNSV 172
AC A G+Q+H C + DD+V V +L++MY +C ++AR VFD I V
Sbjct: 138 ACAVAKALEEGRQLH-CLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVV 196
Query: 173 SWTAMLSAYARSGRKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREG 232
+ AM++ YAR R +A+ +F + + G NEI
Sbjct: 197 CYNAMITGYARRNRPNEALSLFRE------------MQGKYLKPNEI------------- 231
Query: 233 VDIVDPLVLSSIVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAA 292
L S++ +CA L+LGK IH + + ++ A++DM+AKC + A
Sbjct: 232 -------TLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDA 284
Query: 293 KDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHV 352
IF +MR KD +W+++IV A HG+AE+++ +++ M S V+P+E+TF+GL+ ACSH
Sbjct: 285 VSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHT 344
Query: 353 GLVGKGRKLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAA 412
G V +GRK F M+ +GI PS++HY ++DLLSR+G+L++A I +P P W
Sbjct: 345 GRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRI 404
Query: 413 LLSACKHHRNTEMGTRVANHLLSLKPEDPSSYILLSNVYASAAMWQHVSKVRKLMSVMEV 472
LL+AC H N ++ +V+ + L Y++LSN+YA W++V +RK+M +
Sbjct: 405 LLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKA 464
Query: 473 KKEPGYSYIEFGKGSHIFYAGETSHPLKDEIFELLTELDAEMKRRGYVPDTSSVLH-DME 531
K PG S IE H F++G+ ++ L E+ E+K GYVPDTS V+H +M
Sbjct: 465 VKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMN 524
Query: 532 QKEKERQLFWHSERLAVAYGLLKSVPGTVLRVVKNLRVCGDCHIVMKMISRITKREIVVR 591
+EKE L +HSE+LA+ +GLL + PGT +RVVKNLRVC DCH K+IS I R++V+R
Sbjct: 525 DQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLR 584
Query: 592 DATRYHHFKDGKCSCNDFW 610
D R+HHF+DGKCSC DFW
Sbjct: 585 DVQRFHHFEDGKCSCGDFW 603
Score = 106 bits (265), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 107/193 (55%), Gaps = 1/193 (0%)
Query: 10 LRVCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDH 69
L+ CA + + LH +KLGL + TLI+ Y +C+ V A + + + +
Sbjct: 136 LKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCV 195
Query: 70 VSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHA 129
V + +++T Y + N P + +S+F M L+P+ S++ +C LG+ LGK +H
Sbjct: 196 VCYNAMITGYARRNRPNEALSLFREMQG-KYLKPNEITLLSVLSSCALLGSLDLGKWIHK 254
Query: 130 CFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKD 189
FC V ++L+DM+AKCG ++A ++F+ ++ K++ +W+AM+ AYA G+ +
Sbjct: 255 YAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEK 314
Query: 190 AMEIFEQAPVRNL 202
+M +FE+ N+
Sbjct: 315 SMLMFERMRSENV 327
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 70/164 (42%), Gaps = 33/164 (20%)
Query: 287 SDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLI 346
S + A+ +F M D+V + S+ G ++ E +L+ E++ G+ P+ TF L+
Sbjct: 77 SSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLL 136
Query: 347 YACSHVGLVGKGRKLF---------------KSMIEDYG---------------ITPSLQ 376
AC+ + +GR+L ++I Y + P +
Sbjct: 137 KACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVV 196
Query: 377 HYTCLLDLLSRSGHLDEAENLIKAMP---FEPDEPTWAALLSAC 417
Y ++ +R +EA +L + M +P+E T ++LS+C
Sbjct: 197 CYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSC 240
>sp|Q683I9|PP295_ARATH Pentatricopeptide repeat-containing protein At3g62890
OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1
Length = 573
Score = 410 bits (1053), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/548 (38%), Positives = 325/548 (59%), Gaps = 10/548 (1%)
Query: 72 WASILTA-YNQANLPQK--TISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVH 128
W I+ A + + PQ+ IS++ M ++ PD F L+ + + LG++ H
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRN-HRVSPDFHTFPFLLPSFHNPLHLPLGQRTH 85
Query: 129 ACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKK 188
A +L D V++SL++MY+ CG +A+ VFD K+ +W ++++AYA++G
Sbjct: 86 AQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLID 145
Query: 189 DAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMR----REGVDIVDPLVLSSI 244
DA ++F++ P RN+ W+ L++G V +A F EM+ E + +S++
Sbjct: 146 DARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTV 205
Query: 245 VGACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRM-RRKD 303
+ AC LE GK +H + E + + A++DMYAKC + AK +F + +KD
Sbjct: 206 LSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKD 265
Query: 304 VVSWTSIIVGTAQHGQAEETLALYDEMVSA-GVKPNEVTFVGLIYACSHVGLVGKGRKLF 362
V +++++I A +G +E L+ EM ++ + PN VTFVG++ AC H GL+ +G+ F
Sbjct: 266 VKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYF 325
Query: 363 KSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKHHRN 422
K MIE++GITPS+QHY C++DL RSG + EAE+ I +MP EPD W +LLS + +
Sbjct: 326 KMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGD 385
Query: 423 TEMGTRVANHLLSLKPEDPSSYILLSNVYASAAMWQHVSKVRKLMSVMEVKKEPGYSYIE 482
+ L+ L P + +Y+LLSNVYA W V +R M V + K PG SY+E
Sbjct: 386 IKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVE 445
Query: 483 FGKGSHIFYAGETSHPLKDEIFELLTELDAEMKRRGYVPDTSSVLHDMEQKEKERQLFWH 542
H F G+ S + I+ +L E+ ++ GYV DT VL D+ +K+KE L +H
Sbjct: 446 VEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYH 505
Query: 543 SERLAVAYGLLKSVPGTVLRVVKNLRVCGDCHIVMKMISRITKREIVVRDATRYHHFKDG 602
SE+LA+A+ L+K+ PGT +R++KNLR+CGDCH+VMKMIS++ REIVVRD R+HHF+DG
Sbjct: 506 SEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDG 565
Query: 603 KCSCNDFW 610
CSC DFW
Sbjct: 566 SCSCRDFW 573
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 131/290 (45%), Gaps = 44/290 (15%)
Query: 39 PLPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQANLPQKTISIFSTMLAL 98
P N++++AY K L+ A L +EMP+R+ +SW+ ++ Y ++ + +F M L
Sbjct: 129 PAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREM-QL 187
Query: 99 DK-----LQPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDDDVVKSSLVDMYAKC 153
K ++P+ F ++++ ACG LGA GK VHA D V+ ++L+DMYAKC
Sbjct: 188 PKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKC 247
Query: 154 GLPNNARAVFDSIKLKNSV-SWTAMLSAYARSGRKKDAMEIFEQAPVRNLFLWTALVSGL 212
G A+ VF+++ K V +++AM+ A G + ++F +
Sbjct: 248 GSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTS------------ 295
Query: 213 VQSRNEIDAFYSFIEMRREGVDIVDP--LVLSSIVGACANFAVLELGKQIHGLVI-ALGY 269
D ++P + I+GAC + ++ GK ++I G
Sbjct: 296 ---------------------DNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGI 334
Query: 270 ESCLFISNAIVDMYAKCSDIIAAKDIFGRM-RRKDVVSWTSIIVGTAQHG 318
+ +VD+Y + I A+ M DV+ W S++ G+ G
Sbjct: 335 TPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLG 384
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 74/175 (42%), Gaps = 5/175 (2%)
Query: 10 LRVCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEM-PQRD 68
L C R K +HA I K + L LID Y KC ++ A + + ++D
Sbjct: 206 LSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKD 265
Query: 69 HVSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVH 128
++++++ L + +FS M D + P+ F ++ AC G GK
Sbjct: 266 VKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYF 325
Query: 129 ACFVLSPFCDDDVVK--SSLVDMYAKCGLPNNARAVFDSIKLKNSV-SWTAMLSA 180
++ F ++ +VD+Y + GL A + S+ ++ V W ++LS
Sbjct: 326 K-MMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 409 bits (1051), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/623 (35%), Positives = 352/623 (56%), Gaps = 55/623 (8%)
Query: 42 NTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQANLPQKTISIFSTMLA---- 97
N L+ Y K ++ A ++ E MP+R+ VSW +++ Y Q + + S+F M
Sbjct: 83 NGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEV 142
Query: 98 --------------LDKLQP--DHFVFASLVKACGSLGA-TRLGKQVHACFVLSPFCDDD 140
+DK + D +V + +G R G+ A + + +
Sbjct: 143 SWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERN 202
Query: 141 VVK-SSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPV 199
VV ++++ Y + + AR +F+ + K VSWT+ML Y SGR +DA E FE P+
Sbjct: 203 VVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPM 262
Query: 200 RNLFLWTALVSG---------------LVQSRN----------------EIDAFYSFIEM 228
+ + A++ G L++ R+ E++A F +M
Sbjct: 263 KPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQM 322
Query: 229 RREGVDIVDPLVLSSIVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSD 288
+++GV P ++S I+ CA A L+ G+Q+H ++ ++ +++++ ++ MY KC +
Sbjct: 323 QKQGVRPSFPSLIS-ILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGE 381
Query: 289 IIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYA 348
++ AK +F R KD++ W SII G A HG EE L ++ EM S+G PN+VT + ++ A
Sbjct: 382 LVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTA 441
Query: 349 CSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEP 408
CS+ G + +G ++F+SM + +TP+++HY+C +D+L R+G +D+A LI++M +PD
Sbjct: 442 CSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDAT 501
Query: 409 TWAALLSACKHHRNTEMGTRVANHLLSLKPEDPSSYILLSNVYASAAMWQHVSKVRKLMS 468
W ALL ACK H ++ A L +P++ +Y+LLS++ AS + W V+ VRK M
Sbjct: 502 VWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMR 561
Query: 469 VMEVKKEPGYSYIEFGKGSHIFY-AGETSHPLKDEIFELLTELDAEMKRRGYVPDTSSVL 527
V K PG S+IE GK H+F G +HP + I +L + D ++ GY PD S VL
Sbjct: 562 TNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVL 621
Query: 528 HDMEQKEKERQLFWHSERLAVAYGLLKSVPGTVLRVVKNLRVCGDCHIVMKMISRITKRE 587
HD++++EK L HSERLAVAYGLLK G +RV+KNLRVCGDCH +K+IS++T+RE
Sbjct: 622 HDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTERE 681
Query: 588 IVVRDATRYHHFKDGKCSCNDFW 610
I++RDA R+HHF +G+CSC D+W
Sbjct: 682 IILRDANRFHHFNNGECSCRDYW 704
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 124/260 (47%), Gaps = 28/260 (10%)
Query: 151 AKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVRNLFLWTALVS 210
++ G N AR FDS++ K SW +++S Y +G K+A ++F++ RN+ W LVS
Sbjct: 28 SRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVS 87
Query: 211 GLVQSRNEIDAFYSFIEMRREGV----DIVDPLVLSSIVGACAN-FAVLELGKQIHGLVI 265
G +++R ++A F M V +V + +VG + F + ++ V+
Sbjct: 88 GYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVM 147
Query: 266 ALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLA 325
G I + +D A+ ++ M KDVV+ T++I G + G+ +E
Sbjct: 148 FGG-----LIDDGRID---------KARKLYDMMPVKDVVASTNMIGGLCREGRVDEARL 193
Query: 326 LYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCLLDLL 385
++DEM + N VT+ +I V RKLF+ M E ++ +T +L
Sbjct: 194 IFDEM----RERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVS-----WTSMLLGY 244
Query: 386 SRSGHLDEAENLIKAMPFEP 405
+ SG +++AE + MP +P
Sbjct: 245 TLSGRIEDAEEFFEVMPMKP 264
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 100/465 (21%), Positives = 180/465 (38%), Gaps = 86/465 (18%)
Query: 71 SWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHAC 130
SW SI++ Y LP++ +F M
Sbjct: 50 SWNSIVSGYFSNGLPKEARQLFDEM----------------------------------- 74
Query: 131 FVLSPFCDDDVVK-SSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKD 189
+ +VV + LV Y K + AR VF+ + +N VSWTAM+ Y + G +
Sbjct: 75 ------SERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGE 128
Query: 190 AMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACA 249
A +F + P RN WT + GL+ ID +M + + D + ++++G
Sbjct: 129 AESLFWRMPERNEVSWTVMFGGLIDD-GRIDKARKLYDM----MPVKDVVASTNMIGGLC 183
Query: 250 NFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTS 309
++ + L+ E + ++ Y + + + A+ +F M K VSWTS
Sbjct: 184 REGRVDEAR----LIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTS 239
Query: 310 IIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDY 369
+++G G+ E+ ++ M V VG VG + K R++F M +
Sbjct: 240 MLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGF----GEVGEISKARRVFDLMEDRD 295
Query: 370 GITPSLQHYTCLLDLLSRSGHLDEAENLIKAMP---FEPDEPTWAALLSACKHHRNTEMG 426
T + ++ R G EA +L M P P+ ++LS C + + G
Sbjct: 296 NAT-----WRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYG 350
Query: 427 TRVANHLLSLKPEDPSSYILLSNVYASAAMWQHVSKVRKLMSVMEVKKEPGYSYIEFGKG 486
+V HL+ + +D +VY ++ + K +L+ V + F
Sbjct: 351 RQVHAHLVRCQFDD--------DVYVASVLMTMYVKCGELVKAKLV-------FDRFSSK 395
Query: 487 SHIFY----AGETSHPLKDEIFELLTELDAEMKRRGYVPDTSSVL 527
I + +G SH L +E ++ EM G +P+ +++
Sbjct: 396 DIIMWNSIISGYASHGLGEEALKIF----HEMPSSGTMPNKVTLI 436
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 86/196 (43%), Gaps = 9/196 (4%)
Query: 10 LRVCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDH 69
L VCA + +HA +++ + + L+ Y KC + A + + +D
Sbjct: 338 LSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDI 397
Query: 70 VSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHA 129
+ W SI++ Y L ++ + IF M + + P+ +++ AC G G ++
Sbjct: 398 IMWNSIISGYASHGLGEEALKIFHEMPSSGTM-PNKVTLIAILTACSYAGKLEEGLEIFE 456
Query: 130 CFVLSPFCDDDVVK--SSLVDMYAKCGLPNNARAVFDSIKLK-NSVSWTAMLSAYARSGR 186
+ S FC V+ S VDM + G + A + +S+ +K ++ W A+L A R
Sbjct: 457 S-MESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSR 515
Query: 187 ----KKDAMEIFEQAP 198
+ A ++FE P
Sbjct: 516 LDLAEVAAKKLFENEP 531
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 409 bits (1050), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/632 (34%), Positives = 339/632 (53%), Gaps = 74/632 (11%)
Query: 23 KTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQA 82
K LH + + Q + N L+D Y KC ++ A+ + M +D VSW +++ Y+Q
Sbjct: 249 KQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQI 308
Query: 83 NLPQKTISIFSTM----LALD------------------------------KLQPDHFVF 108
+ + +F M + +D ++P+
Sbjct: 309 GRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTL 368
Query: 109 ASLVKACGSLGATRLGKQVHACFVLSPF-------CDDDVVKSSLVDMYAKCGLPNNARA 161
S++ C S+GA GK++H + P D+++V + L+DMYAKC + ARA
Sbjct: 369 ISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARA 428
Query: 162 VFDSI--KLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEI 219
+FDS+ K ++ V+WT M+ Y++ G DA + E L + + Q+R
Sbjct: 429 MFDSLSPKERDVVTWTVMIGGYSQHG---DANKALE--------LLSEMFEEDCQTRP-- 475
Query: 220 DAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIHGLVIALGYESC-LFISNA 278
+ +S + ACA+ A L +GKQIH + + LF+SN
Sbjct: 476 -----------------NAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNC 518
Query: 279 IVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPN 338
++DMYAKC I A+ +F M K+ V+WTS++ G HG EE L ++DEM G K +
Sbjct: 519 LIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLD 578
Query: 339 EVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLI 398
VT + ++YACSH G++ +G + F M +G++P +HY CL+DLL R+G L+ A LI
Sbjct: 579 GVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLI 638
Query: 399 KAMPFEPDEPTWAALLSACKHHRNTEMGTRVANHLLSLKPEDPSSYILLSNVYASAAMWQ 458
+ MP EP W A LS C+ H E+G A + L SY LLSN+YA+A W+
Sbjct: 639 EEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWK 698
Query: 459 HVSKVRKLMSVMEVKKEPGYSYIEFGKGSHIFYAGETSHPLKDEIFELLTELDAEMKRRG 518
V+++R LM VKK PG S++E KG+ F+ G+ +HP EI+++L + +K G
Sbjct: 699 DVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIG 758
Query: 519 YVPDTSSVLHDMEQKEKERQLFWHSERLAVAYGLLKSVPGTVLRVVKNLRVCGDCHIVMK 578
YVP+T LHD++ +EK+ LF HSE+LA+AYG+L + G +R+ KNLRVCGDCH
Sbjct: 759 YVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFT 818
Query: 579 MISRITKREIVVRDATRYHHFKDGKCSCNDFW 610
+SRI +I++RD++R+HHFK+G CSC +W
Sbjct: 819 YMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 196 bits (498), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 220/452 (48%), Gaps = 19/452 (4%)
Query: 42 NTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQANLPQKTISIFSTMLALDKL 101
N L+ Y +C + A + +EM D VSW SI+ +Y + P+ + +FS M
Sbjct: 166 NALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGC 225
Query: 102 QPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARA 161
+PD+ +++ C SLG LGKQ+H V S + V + LVDMYAKCG+ + A
Sbjct: 226 RPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANT 285
Query: 162 VFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVR----NLFLWTALVSGLVQSRN 217
VF ++ +K+ VSW AM++ Y++ GR +DA+ +FE+ ++ W+A +SG Q
Sbjct: 286 VFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGL 345
Query: 218 EIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIHGLVIAL-------GYE 270
+A +M G+ + + L S++ CA+ L GK+IH I G+
Sbjct: 346 GYEALGVCRQMLSSGIK-PNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHG 404
Query: 271 SCLFISNAIVDMYAKCSDIIAAKDIFGRM--RRKDVVSWTSIIVGTAQHGQAEETLALYD 328
+ N ++DMYAKC + A+ +F + + +DVV+WT +I G +QHG A + L L
Sbjct: 405 DENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLS 464
Query: 329 EMVS--AGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCLLDLLS 386
EM +PN T + AC+ + + G+++ + + L CL+D+ +
Sbjct: 465 EMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYA 524
Query: 387 RSGHLDEAENLIKAMPFEPDEPTWAALLSACKHHRNTEMGTRVANHL--LSLKPEDPSSY 444
+ G + +A + M +E TW +L++ H E + + + + K + +
Sbjct: 525 KCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLL 583
Query: 445 ILLSNVYASAAMWQHVSKVRKLMSVMEVKKEP 476
++L S + Q + ++ +V V P
Sbjct: 584 VVLYACSHSGMIDQGMEYFNRMKTVFGVSPGP 615
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/480 (23%), Positives = 213/480 (44%), Gaps = 78/480 (16%)
Query: 22 VKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDH--VSWASILTAY 79
VK +H +++ G+ L + LI Y + +A LL P D W S++ +Y
Sbjct: 44 VKLIHQKLLSFGILTLN-LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSY 102
Query: 80 NQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDD 139
K + +F M +L PD++ F + KACG + + R G+ HA +++ F +
Sbjct: 103 GDNGCANKCLYLFGLMHSL-SWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISN 161
Query: 140 DVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPV 199
V ++LV MY++C ++AR VFD + + + VSW +++ +YA+ G+ K A+E+F +
Sbjct: 162 VFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSR--- 218
Query: 200 RNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQ 259
M E D + L +++ CA+ LGKQ
Sbjct: 219 ----------------------------MTNEFGCRPDNITLVNVLPPCASLGTHSLGKQ 250
Query: 260 IHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQ 319
+H + +F+ N +VDMYAKC + A +F M KDVVSW +++ G +Q G+
Sbjct: 251 LHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGR 310
Query: 320 AEETLALYD-----------------------------------EMVSAGVKPNEVTFVG 344
E+ + L++ +M+S+G+KPNEVT +
Sbjct: 311 FEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLIS 370
Query: 345 LIYACSHVGLVGKGRKL------FKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLI 398
++ C+ VG + G+++ + + G L+D+ ++ +D A +
Sbjct: 371 VLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMF 430
Query: 399 KAM-PFEPDEPTWAALLSACKHHRNTEMGTRVANHLLSLKPED-PSSYILLSNVYASAAM 456
++ P E D TW ++ H + + + + + P+++ + + A A++
Sbjct: 431 DSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASL 490
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630
OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 406 bits (1044), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/645 (34%), Positives = 350/645 (54%), Gaps = 39/645 (6%)
Query: 1 MQISHYLHRLRVCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLI--DAYGKCDLVQYAH 58
+ I H L L C ++ ALT +H IK G+ LI A D + YA
Sbjct: 3 IAIHHCLSLLNSC-KNLRALT--QIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYAR 59
Query: 59 HLLEEMPQRDHVSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSL 118
LL P+ D + +++ Y++++ P ++++F M+ + PD F FA ++KA +
Sbjct: 60 RLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENF 119
Query: 119 GATRLGKQVHACFVLSPFCDDDVVKSSLVDMYAKCGL-------------PN-------- 157
+ R G Q+H + V ++L+ MY CG PN
Sbjct: 120 RSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVI 179
Query: 158 ----------NARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVRNLFLWTA 207
AR +FD + ++N SW ML+ Y ++G + A IF + P R+ W+
Sbjct: 180 TACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWST 239
Query: 208 LVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIHGLVIAL 267
++ G+ + + ++F F E++R G+ + + L+ ++ AC+ E GK +HG V
Sbjct: 240 MIVGIAHNGSFNESFLYFRELQRAGMS-PNEVSLTGVLSACSQSGSFEFGKILHGFVEKA 298
Query: 268 GYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKD-VVSWTSIIVGTAQHGQAEETLAL 326
GY + ++NA++DMY++C ++ A+ +F M+ K +VSWTS+I G A HGQ EE + L
Sbjct: 299 GYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRL 358
Query: 327 YDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCLLDLLS 386
++EM + GV P+ ++F+ L++ACSH GL+ +G F M Y I P ++HY C++DL
Sbjct: 359 FNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYG 418
Query: 387 RSGHLDEAENLIKAMPFEPDEPTWAALLSACKHHRNTEMGTRVANHLLSLKPEDPSSYIL 446
RSG L +A + I MP P W LL AC H N E+ +V L L P + +L
Sbjct: 419 RSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVL 478
Query: 447 LSNVYASAAMWQHVSKVRKLMSVMEVKKEPGYSYIEFGKGSHIFYAGETSHPLKDEIFEL 506
LSN YA+A W+ V+ +RK M V +KK +S +E GK + F AGE + E E
Sbjct: 479 LSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEK 538
Query: 507 LTELDAEMK-RRGYVPDTSSVLHDMEQKEKERQLFWHSERLAVAYGLLKSVPGTVLRVVK 565
L E+ +K GY P+ +S L+D+E++EKE Q+ HSE+LA+A+ L + G +R+VK
Sbjct: 539 LKEIILRLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVK 598
Query: 566 NLRVCGDCHIVMKMISRITKREIVVRDATRYHHFKDGKCSCNDFW 610
NLR+C DCH VMK+ S++ EI+VRD R+H FKDG CSC D+W
Sbjct: 599 NLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
>sp|Q8VYH0|PP313_ARATH Pentatricopeptide repeat-containing protein At4g15720
OS=Arabidopsis thaliana GN=PCMP-H1 PE=2 SV=1
Length = 616
Score = 406 bits (1043), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/596 (37%), Positives = 334/596 (56%), Gaps = 40/596 (6%)
Query: 25 LHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQANL 84
LH +KLG N L+ +Y K + A L +EM + + VSW S+++ YN
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 85 PQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDDDVVKS 144
PQ +S+F M + P+ + FAS+ KAC +L +R+GK +HA +S + VV S
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 145 SLVDMYAKCGLPNNARAVFDSI--KLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVRNL 202
SLVDMY KC AR VFDS+ +N VSWT+M++AYA++ R +A+E+F
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRS------ 224
Query: 203 FLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIHG 262
AL S D + +L+S++ AC++ L+ GK HG
Sbjct: 225 -FNAALTS-----------------------DRANQFMLASVISACSSLGRLQWGKVAHG 260
Query: 263 LVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEE 322
LV GYES ++ +++DMYAKC + A+ IF R+R V+S+TS+I+ A+HG E
Sbjct: 261 LVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEA 320
Query: 323 TLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCLL 382
+ L+DEMV+ + PN VT +G+++ACSH GLV +G + M E YG+ P +HYTC++
Sbjct: 321 AVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVV 380
Query: 383 DLLSRSGHLDEAENLIKAMPFEPDEPT--WAALLSACKHHRNTEMGTRVANHLLSLKPED 440
D+L R G +DEA L K + ++ W ALLSA + H E+ + + L+ +
Sbjct: 381 DMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQV 440
Query: 441 PSSYILLSNVYASAAMWQHVSKVRKLMSVMEVKKEPGYSYIEFGKGSHIFYAGETSHPLK 500
S+YI LSN YA + W+ +R M KE S+IE ++F+AG+ S
Sbjct: 441 TSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYVFHAGDLSCDES 500
Query: 501 DEIFELLTELDAEMKRRGY------VPDTSSVLHDMEQKEKERQLFWHSERLAVAYGLLK 554
EI L +L+ MK RG+ + +SSV D++++ K+ + H ERLA+AYGLL
Sbjct: 501 GEIERFLKDLEKRMKERGHRGSSSMITTSSSVFVDVDEEAKDEMVSLHCERLALAYGLLH 560
Query: 555 SVPGTVLRVVKNLRVCGDCHIVMKMISRITKREIVVRDATRYHHFKDGKCSCNDFW 610
G+ +R++ NLR+C DCH K+IS I +REIVVRD R+H FK+G C+C D+W
Sbjct: 561 LPAGSTIRIMNNLRMCRDCHEAFKLISEIVEREIVVRDVNRFHCFKNGSCTCRDYW 616
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 103/177 (58%), Gaps = 3/177 (1%)
Query: 23 KTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMP--QRDHVSWASILTAYN 80
K +HA++ GL + + ++L+D YGKC+ V+ A + + M R+ VSW S++TAY
Sbjct: 151 KNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYA 210
Query: 81 QANLPQKTISIFSTM-LALDKLQPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDD 139
Q + I +F + AL + + F+ AS++ AC SLG + GK H + +
Sbjct: 211 QNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESN 270
Query: 140 DVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQ 196
VV +SL+DMYAKCG + A +F I+ + +S+T+M+ A A+ G + A+++F++
Sbjct: 271 TVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDE 327
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 86/205 (41%), Gaps = 20/205 (9%)
Query: 23 KTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQA 82
K H + + G + +L+D Y KC + A + + +S+ S++ A +
Sbjct: 256 KVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKH 315
Query: 83 NLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHACFVLS-PFCDDDV 141
L + + +F M+A ++ P++ ++ AC G G + + D
Sbjct: 316 GLGEAAVKLFDEMVA-GRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSR 374
Query: 142 VKSSLVDMYAKCGLPNNARAVFDSIKL---KNSVSWTAMLSAYARSGRKKDAMEIFEQAP 198
+ +VDM + G + A + +I++ + ++ W A+LSA GR +EI +A
Sbjct: 375 HYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSA----GRLHGRVEIVSEAS 430
Query: 199 VRNLFLWTALVSGLVQSRNEIDAFY 223
R L+QS ++ + Y
Sbjct: 431 KR-----------LIQSNQQVTSAY 444
>sp|Q9FND7|PP410_ARATH Putative pentatricopeptide repeat-containing protein At5g40405
OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1
Length = 612
Score = 405 bits (1041), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/592 (35%), Positives = 344/592 (58%), Gaps = 4/592 (0%)
Query: 22 VKTLHAQIIKLGLHQYGPLPNTLIDAYGKCD--LVQYAHHLLEEMPQRDHVSWASILTAY 79
V+ +HA++ G + L + A D + YA+ +L+ + + S++ A+
Sbjct: 22 VRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIRAH 81
Query: 80 NQANLPQKTISIFSTMLAL-DKLQPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCD 138
++ +P+K+ + +L+ + L+PD++ LV+AC L G QVH + F +
Sbjct: 82 CKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDN 141
Query: 139 DDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAP 198
D V++ L+ +YA+ G ++ VF+SI + V TAM++A AR G A ++FE P
Sbjct: 142 DPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMP 201
Query: 199 VRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGK 258
R+ W A++SG Q +A F M+ EGV V+ + + S++ AC L+ G+
Sbjct: 202 ERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVK-VNGVAMISVLSACTQLGALDQGR 260
Query: 259 QIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHG 318
H + + + ++ +VD+YAKC D+ A ++F M K+V +W+S + G A +G
Sbjct: 261 WAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNG 320
Query: 319 QAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHY 378
E+ L L+ M GV PN VTFV ++ CS VG V +G++ F SM ++GI P L+HY
Sbjct: 321 FGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHY 380
Query: 379 TCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKHHRNTEMGTRVANHLLSLKP 438
CL+DL +R+G L++A ++I+ MP +P W++LL A + ++N E+G + +L L+
Sbjct: 381 GCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELET 440
Query: 439 EDPSSYILLSNVYASAAMWQHVSKVRKLMSVMEVKKEPGYSYIEFGKGSHIFYAGETSHP 498
+ +Y+LLSN+YA + W +VS VR+ M V+K+PG S +E H F+ G+ SHP
Sbjct: 441 ANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHP 500
Query: 499 LKDEIFELLTELDAEMKRRGYVPDTSSVLHDMEQKEKERQLFWHSERLAVAYGLLKSVPG 558
+I + ++ ++ GY DT+ V+ D++++EKE L HSE+ A+A+G++
Sbjct: 501 KYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKED 560
Query: 559 TVLRVVKNLRVCGDCHIVMKMISRITKREIVVRDATRYHHFKDGKCSCNDFW 610
+R+VKNLRVCGDCH V MIS+I REI+VRD R+HHFKDG CSCN FW
Sbjct: 561 VPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCSCNGFW 612
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080
OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 404 bits (1039), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/570 (37%), Positives = 311/570 (54%), Gaps = 34/570 (5%)
Query: 42 NTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQANLPQKTISIFSTMLALDKL 101
N LI+ Y + + A + +EMP R +W +++ Q ++ +S+F M L
Sbjct: 114 NILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLG-F 172
Query: 102 QPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARA 161
PD + S+ L + +G+Q+H + D VV SSL MY
Sbjct: 173 SPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYM---------- 222
Query: 162 VFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDA 221
R+G+ +D + PVRNL W L+ G Q+
Sbjct: 223 ---------------------RNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETV 261
Query: 222 FYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVD 281
Y + M+ G + + +++ +C++ A+ G+QIH I +G S + + ++++
Sbjct: 262 LYLYKMMKISGCR-PNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLIS 320
Query: 282 MYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLALYDEMV-SAGVKPNEV 340
MY+KC + A F +D V W+S+I HGQ +E + L++ M ++ NEV
Sbjct: 321 MYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEV 380
Query: 341 TFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKA 400
F+ L+YACSH GL KG +LF M+E YG P L+HYTC++DLL R+G LD+AE +I++
Sbjct: 381 AFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRS 440
Query: 401 MPFEPDEPTWAALLSACKHHRNTEMGTRVANHLLSLKPEDPSSYILLSNVYASAAMWQHV 460
MP + D W LLSAC H+N EM RV +L + P D + Y+LL+NV+ASA W+ V
Sbjct: 441 MPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDV 500
Query: 461 SKVRKLMSVMEVKKEPGYSYIEFGKGSHIFYAGETSHPLKDEIFELLTELDAEMKRRGYV 520
S+VRK M VKKE G S+ E H F G+ S EI+ L EL EMK +GY
Sbjct: 501 SEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYK 560
Query: 521 PDTSSVLHDMEQKEKERQLFWHSERLAVAYGLLKSVPGTVLRVVKNLRVCGDCHIVMKMI 580
PDT+SVLHDM+++EKE L HSE+LAVA+ L+ G +R++KNLRVC DCH+ K I
Sbjct: 561 PDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYI 620
Query: 581 SRITKREIVVRDATRYHHFKDGKCSCNDFW 610
S I REI +RD +R+HHF +GKCSC D+W
Sbjct: 621 SVIKNREITLRDGSRFHHFINGKCSCGDYW 650
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 179/348 (51%), Gaps = 3/348 (0%)
Query: 107 VFASLVKACGSLGATRLGKQVHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSI 166
+F +++C + + GKQ+H V+S F D + + L+ MY+K G +A AV+ +
Sbjct: 46 LFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRM 105
Query: 167 KLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFI 226
+ KN +S +++ Y R+G +A ++F++ P R L W A+++GL+Q + F
Sbjct: 106 RKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFR 165
Query: 227 EMRREGVDIVDPLVLSSIVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKC 286
EM G D L S+ A + +G+QIHG I G E L +++++ MY +
Sbjct: 166 EMHGLGFS-PDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRN 224
Query: 287 SDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLI 346
+ + + M +++V+W ++I+G AQ+G E L LY M +G +PN++TFV ++
Sbjct: 225 GKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVL 284
Query: 347 YACSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPD 406
+CS + + G+G+++ I+ G + + + L+ + S+ G L +A E D
Sbjct: 285 SSCSDLAIRGQGQQIHAEAIK-IGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDE-D 342
Query: 407 EPTWAALLSACKHHRNTEMGTRVANHLLSLKPEDPSSYILLSNVYASA 454
E W++++SA H + + N + + + L+ +YA +
Sbjct: 343 EVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACS 390
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 403 bits (1035), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/591 (36%), Positives = 331/591 (56%), Gaps = 35/591 (5%)
Query: 22 VKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQ 81
+K +HA +++ G + L L++ + YA + +EM + W ++ Y +
Sbjct: 27 LKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVR 86
Query: 82 ANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDDDV 141
LP +++ ++ M L ++PD F + +VKA LG G +HA V F +
Sbjct: 87 NQLPFESLLLYKKMRDLG-VRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGI 145
Query: 142 VKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVRN 201
V + LV MY K G ++A +F+S++ V++
Sbjct: 146 VATELVMMYMKFGELSSAEFLFESMQ-------------------------------VKD 174
Query: 202 LFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIH 261
L W A ++ VQ+ N A F +M + V D + S++ AC LE+G++I+
Sbjct: 175 LVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQF-DSFTVVSMLSACGQLGSLEIGEEIY 233
Query: 262 GLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAE 321
+ + + NA +DM+ KC + AA+ +F M++++VVSW+++IVG A +G +
Sbjct: 234 DRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSR 293
Query: 322 ETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIE--DYGITPSLQHYT 379
E L L+ M + G++PN VTF+G++ ACSH GLV +G++ F M++ D + P +HY
Sbjct: 294 EALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYA 353
Query: 380 CLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKHHRNTEMGTRVANHLLSLKPE 439
C++DLL RSG L+EA IK MP EPD W ALL AC HR+ +G +VA+ L+ P+
Sbjct: 354 CMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPD 413
Query: 440 DPSSYILLSNVYASAAMWQHVSKVRKLMSVMEVKKEPGYSYIEFGKGSHIFYAGETSHPL 499
S ++LLSN+YA+A W V KVR M + KK YS +EF H F G+ SHP
Sbjct: 414 IGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQ 473
Query: 500 KDEIFELLTELDAEMKRRGYVPDTSSVLHDMEQKEKERQLFWHSERLAVAYGLLKSVPGT 559
I+E L E+ ++++ GYVPDT SV HD+E +EKE L HSE+LA+A+GL+K PG
Sbjct: 474 SKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGH 533
Query: 560 VLRVVKNLRVCGDCHIVMKMISRITKREIVVRDATRYHHFKDGKCSCNDFW 610
+RV+KNLR C DCH K +S +T EI++RD R+HHF++G CSC +FW
Sbjct: 534 PIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 402 bits (1033), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/608 (35%), Positives = 341/608 (56%), Gaps = 41/608 (6%)
Query: 10 LRVCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDH 69
L CA + A + +H + +KLG+ + N L+ Y + + + MP+ D
Sbjct: 422 LSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQ 481
Query: 70 VSWASILTAY--NQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQV 127
VSW SI+ A ++ +LP+ + + A KL F + S G LGKQ+
Sbjct: 482 VSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFG--ELGKQI 539
Query: 128 HACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSI-KLKNSVSWTAMLSAYARSGR 186
H + + D+ +++L+ Y KCG + +F + + +++V+W +M+S Y +
Sbjct: 540 HGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNEL 599
Query: 187 KKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVG 246
A++ LV ++Q+ +D+F + ++++
Sbjct: 600 LAKALD---------------LVWFMLQTGQRLDSF-----------------MYATVLS 627
Query: 247 ACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVS 306
A A+ A LE G ++H + ES + + +A+VDMY+KC + A F M ++ S
Sbjct: 628 AFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYS 687
Query: 307 WTSIIVGTAQHGQAEETLALYDEMVSAG-VKPNEVTFVGLIYACSHVGLVGKGRKLFKSM 365
W S+I G A+HGQ EE L L++ M G P+ VTFVG++ ACSH GL+ +G K F+SM
Sbjct: 688 WNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESM 747
Query: 366 IEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSAC--KHHRNT 423
+ YG+ P ++H++C+ D+L R+G LD+ E+ I+ MP +P+ W +L AC + R
Sbjct: 748 SDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKA 807
Query: 424 EMGTRVANHLLSLKPEDPSSYILLSNVYASAAMWQHVSKVRKLMSVMEVKKEPGYSYIEF 483
E+G + A L L+PE+ +Y+LL N+YA+ W+ + K RK M +VKKE GYS++
Sbjct: 808 ELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTM 867
Query: 484 GKGSHIFYAGETSHPLKDEIFELLTELDAEMKRRGYVPDTSSVLHDMEQKEKERQLFWHS 543
G H+F AG+ SHP D I++ L EL+ +M+ GYVP T L+D+EQ+ KE L +HS
Sbjct: 868 KDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHS 927
Query: 544 ERLAVAYGLLKSVPGTV-LRVVKNLRVCGDCHIVMKMISRITKREIVVRDATRYHHFKDG 602
E+LAVA+ L T+ +R++KNLRVCGDCH K IS+I R+I++RD+ R+HHF+DG
Sbjct: 928 EKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDG 987
Query: 603 KCSCNDFW 610
CSC+DFW
Sbjct: 988 ACSCSDFW 995
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 182/403 (45%), Gaps = 45/403 (11%)
Query: 23 KTLHAQIIKLGLHQYGPLPNTLIDAYGKC-DLVQYAHHLLEEMPQRDHVSWASILTAYNQ 81
+ +H + KL + N LI Y KC V YA ++ ++ VSW SI++ Y+Q
Sbjct: 124 RQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQ 183
Query: 82 ANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGA--TRLGKQVHACFVLSPFCDD 139
A + IFS+M D +P + F SLV SL RL +Q+ S D
Sbjct: 184 AGDQRSAFRIFSSM-QYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTD 242
Query: 140 DVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPV 199
V S LV SA+A+SG A ++F Q
Sbjct: 243 LFVGSGLV-------------------------------SAFAKSGSLSYARKVFNQMET 271
Query: 200 RNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDP----LVLSSIVG-ACANFAVL 254
RN L+ GLV+ + +A F++M +D V P ++LSS + A L
Sbjct: 272 RNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM-ID-VSPESYVILLSSFPEYSLAEEVGL 329
Query: 255 ELGKQIHGLVIALGYESCLF-ISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVG 313
+ G+++HG VI G + I N +V+MYAKC I A+ +F M KD VSW S+I G
Sbjct: 330 KKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITG 389
Query: 314 TAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITP 373
Q+G E + Y M + P T + + +C+ + G+++ ++ GI
Sbjct: 390 LDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLK-LGIDL 448
Query: 374 SLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSA 416
++ L+ L + +G+L+E + +MP E D+ +W +++ A
Sbjct: 449 NVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/462 (23%), Positives = 209/462 (45%), Gaps = 52/462 (11%)
Query: 7 LHRLRVCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQ 66
L ++ C H+ A + H+++ K L + L N LI+AY + A + +EMP
Sbjct: 7 LSFVQSCVGHRGA--ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL 64
Query: 67 RDHVSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRL--G 124
R+ VSWA I++ Y++ N K +F + + + + + F S+++AC +G+ + G
Sbjct: 65 RNCVSWACIVSGYSR-NGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFG 123
Query: 125 KQVHACFVLSPFCDDDVVKSSLVDMYAKC-GLPNNARAVFDSIKLKNSVSWTAMLSAYAR 183
+Q+H + D VV + L+ MY KC G A F I++KNSVSW +++S Y++
Sbjct: 124 RQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQ 183
Query: 184 SGRKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSS 243
+G ++ A IF +Q Y+F + + +P V
Sbjct: 184 AGDQRSAFRIFSS----------------MQYDGSRPTEYTFGSLVTTACSLTEPDV--- 224
Query: 244 IVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKD 303
L +QI + G + LF+ + +V +AK + A+ +F +M ++
Sbjct: 225 -----------RLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRN 273
Query: 304 VVSWTSIIVGTAQHGQAEETLALYDEMVSA-GVKPNEVTFVGLIYA------CSHVGLVG 356
V+ ++VG + EE L+ +M S V P ++V L+ + VGL
Sbjct: 274 AVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILLSSFPEYSLAEEVGL-K 330
Query: 357 KGRKLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSA 416
KGR++ +I + + L+++ ++ G + +A + M + D +W ++++
Sbjct: 331 KGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMT-DKDSVSWNSMITG 389
Query: 417 CKHHRNTEMGTRVANHLLSLKPED--PSSYILLSNVYASAAM 456
+ S++ D P S+ L+S++ + A++
Sbjct: 390 LDQN---GCFIEAVERYKSMRRHDILPGSFTLISSLSSCASL 428
Score = 112 bits (280), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 173/390 (44%), Gaps = 54/390 (13%)
Query: 44 LIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQANLPQKTISIFSTMLALDKLQP 103
L+ A+ K + YA + +M R+ V+ ++ + ++ +F M ++ + P
Sbjct: 249 LVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSP 308
Query: 104 DHFVFA-------SLVKACGSLGATRLGKQVHACFVLSPFCDDDV-VKSSLVDMYAKCGL 155
+ +V SL + G + G++VH + + D V + + LV+MYAKCG
Sbjct: 309 ESYVILLSSFPEYSLAEEVG----LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGS 364
Query: 156 PNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVRNLFLWTALVSGLVQS 215
+AR VF + K+SVS W ++++GL Q+
Sbjct: 365 IADARRVFYFMTDKDSVS-------------------------------WNSMITGLDQN 393
Query: 216 RNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIHGLVIALGYESCLFI 275
I+A + MRR + + L S + +CA+ +LG+QIHG + LG + + +
Sbjct: 394 GCFIEAVERYKSMRRHDI-LPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSV 452
Query: 276 SNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQA-EETLALYDEMVSAG 334
SNA++ +YA+ + + IF M D VSW SII A+ ++ E + + AG
Sbjct: 453 SNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAG 512
Query: 335 VKPNEVTFVGLIYACSHVGLVGKGRKL----FKSMIEDYGITPSLQHYTCLLDLLSRSGH 390
K N +TF ++ A S + G+++ K+ I D T + L+ + G
Sbjct: 513 QKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTEN-----ALIACYGKCGE 567
Query: 391 LDEAENLIKAMPFEPDEPTWAALLSACKHH 420
+D E + M D TW +++S H+
Sbjct: 568 MDGCEKIFSRMAERRDNVTWNSMISGYIHN 597
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 159/357 (44%), Gaps = 43/357 (12%)
Query: 110 SLVKAC-GSLGATRLGKQVHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKL 168
S V++C G GA R H+ + D + ++L++ Y + G +AR VFD + L
Sbjct: 8 SFVQSCVGHRGAARF---FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL 64
Query: 169 KNSVSWTAMLSAYARSGRKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEM 228
+N VSW ++S Y+R+G K+A+ +FL + G+ ++ Y+F+ +
Sbjct: 65 RNCVSWACIVSGYSRNGEHKEAL----------VFLRDMVKEGIFSNQ------YAFVSV 108
Query: 229 RREGVDIVDPLVLSSIVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSD 288
R +I +L G+QIHGL+ L Y +SN ++ MY KC
Sbjct: 109 LRACQEIGSVGIL--------------FGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIG 154
Query: 289 IIA-AKDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLI- 346
+ A FG + K+ VSW SII +Q G ++ M G +P E TF L+
Sbjct: 155 SVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVT 214
Query: 347 YACSHVGLVGKGRKLFKSM---IEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPF 403
ACS L +L + + I+ G+ L + L+ ++SG L A + M
Sbjct: 215 TACS---LTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQME- 270
Query: 404 EPDEPTWAALLSACKHHRNTEMGTRVANHLLSLKPEDPSSYILLSNVYASAAMWQHV 460
+ T L+ + E T++ + S+ P SY++L + + ++ + V
Sbjct: 271 TRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEV 327
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 401 bits (1031), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/613 (35%), Positives = 337/613 (54%), Gaps = 43/613 (7%)
Query: 10 LRVCARHQIALTVKTLHAQIIKLG-LHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRD 68
L C+ ++ T K LHA +K G L + + + L+D Y C V + + M R
Sbjct: 309 LPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRK 368
Query: 69 HVSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVH 128
W +++ Y+Q ++ + +F M L + A +V AC GA + +H
Sbjct: 369 IGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIH 428
Query: 129 ACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKK 188
V D V+++L+DMY+ R G+
Sbjct: 429 GFVVKRGLDRDRFVQNTLMDMYS-------------------------------RLGKID 457
Query: 189 DAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRR------EGVDIV----DP 238
AM IF + R+L W +++G V S + DA +M+ +G V +
Sbjct: 458 IAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNS 517
Query: 239 LVLSSIVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGR 298
+ L +I+ +CA + L GK+IH I + + + +A+VDMYAKC + ++ +F +
Sbjct: 518 ITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQ 577
Query: 299 MRRKDVVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKG 358
+ +K+V++W II+ HG +E + L M+ GVKPNEVTF+ + ACSH G+V +G
Sbjct: 578 IPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEG 637
Query: 359 RKLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEP-TWAALLSAC 417
++F M DYG+ PS HY C++DLL R+G + EA L+ MP + ++ W++LL A
Sbjct: 638 LRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGAS 697
Query: 418 KHHRNTEMGTRVANHLLSLKPEDPSSYILLSNVYASAAMWQHVSKVRKLMSVMEVKKEPG 477
+ H N E+G A +L+ L+P S Y+LL+N+Y+SA +W ++VR+ M V+KEPG
Sbjct: 698 RIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPG 757
Query: 478 YSYIEFGKGSHIFYAGETSHPLKDEIFELLTELDAEMKRRGYVPDTSSVLHDMEQKEKER 537
S+IE G H F AG++SHP +++ L L M++ GYVPDTS VLH++E+ EKE
Sbjct: 758 CSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEI 817
Query: 538 QLFWHSERLAVAYGLLKSVPGTVLRVVKNLRVCGDCHIVMKMISRITKREIVVRDATRYH 597
L HSE+LA+A+G+L + PGT++RV KNLRVC DCH+ K IS+I REI++RD R+H
Sbjct: 818 LLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFH 877
Query: 598 HFKDGKCSCNDFW 610
FK+G CSC D+W
Sbjct: 878 RFKNGTCSCGDYW 890
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 195/415 (46%), Gaps = 49/415 (11%)
Query: 23 KTLHAQIIKLG-LHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQ 81
K +HA ++ G L+ + + NTL+ YGK + + LL RD V+W ++L++ Q
Sbjct: 222 KQVHAYGLRKGELNSF--IINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQ 279
Query: 82 ANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDDD- 140
+ + M+ L+ ++PD F +S++ AC L R GK++HA + + D++
Sbjct: 280 NEQLLEALEYLREMV-LEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 338
Query: 141 VVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVR 200
V S+LVDMY C + R VFD + + W AM++ Y+++ K+A+ +
Sbjct: 339 FVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLL------- 391
Query: 201 NLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQI 260
FI M + + ++ +V AC + I
Sbjct: 392 ------------------------FIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAI 427
Query: 261 HGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQA 320
HG V+ G + F+ N ++DMY++ I A IFG+M +D+V+W ++I G
Sbjct: 428 HGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHH 487
Query: 321 EETLALYDEM------VSAG-----VKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDY 369
E+ L L +M VS G +KPN +T + ++ +C+ + + KG+++ I++
Sbjct: 488 EDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKN- 546
Query: 370 GITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKHHRNTE 424
+ + + L+D+ ++ G L + + +P + + TW ++ A H N +
Sbjct: 547 NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGNGQ 600
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/456 (24%), Positives = 204/456 (44%), Gaps = 61/456 (13%)
Query: 23 KTLHAQIIKLGLHQYG----PLPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTA 78
K +HA + K G YG + NTL++ Y KC + + + + +R+ VSW S++++
Sbjct: 117 KQIHAHVYKFG---YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISS 173
Query: 79 YNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATR---LGKQVHACFVLSP 135
+ + F ML + ++P F S+V AC +L +GKQVHA + L
Sbjct: 174 LCSFEKWEMALEAFRCMLD-ENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHA-YGLRK 231
Query: 136 FCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFE 195
+ + ++LV MY K G +++ + S ++ V+W +LS+
Sbjct: 232 GELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSS--------------- 276
Query: 196 QAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLE 255
L Q+ ++A EM EGV+ D +SS++ AC++ +L
Sbjct: 277 ----------------LCQNEQLLEALEYLREMVLEGVE-PDEFTISSVLPACSHLEMLR 319
Query: 256 LGKQIHGLVIALG-YESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGT 314
GK++H + G + F+ +A+VDMY C +++ + +F M + + W ++I G
Sbjct: 320 TGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGY 379
Query: 315 AQHGQAEETLALYDEM-VSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITP 373
+Q+ +E L L+ M SAG+ N T G++ AC G + ++ + G+
Sbjct: 380 SQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR-KEAIHGFVVKRGLDR 438
Query: 374 SLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSA---CKHH---------- 420
L+D+ SR G +D A + M + D TW +++ +HH
Sbjct: 439 DRFVQNTLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMITGYVFSEHHEDALLLLHKM 497
Query: 421 RNTEMGTRVANHLLSLKPEDPSSYILLSNVYASAAM 456
+N E +SLKP + +L + A +A+
Sbjct: 498 QNLERKVSKGASRVSLKPNSITLMTILPSCAALSAL 533
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 159/349 (45%), Gaps = 39/349 (11%)
Query: 72 WASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHA-C 130
W +L + ++NL ++ + + M+ L ++PD++ F +L+KA L LGKQ+HA
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLG-IKPDNYAFPALLKAVADLQDMELGKQIHAHV 123
Query: 131 FVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDA 190
+ D V ++LV++Y KCG VFD I +N VS
Sbjct: 124 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVS----------------- 166
Query: 191 MEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACAN 250
W +L+S L A +F M E V+ L S+V AC+N
Sbjct: 167 --------------WNSLISSLCSFEKWEMALEAFRCMLDENVE-PSSFTLVSVVTACSN 211
Query: 251 FAVLE---LGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSW 307
+ E +GKQ+H + G E FI N +V MY K + ++K + G +D+V+W
Sbjct: 212 LPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTW 270
Query: 308 TSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMIE 367
+++ Q+ Q E L EMV GV+P+E T ++ ACSH+ ++ G++L ++
Sbjct: 271 NTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALK 330
Query: 368 DYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSA 416
+ + + + L+D+ + + M F+ W A+++
Sbjct: 331 NGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM-FDRKIGLWNAMIAG 378
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 127/277 (45%), Gaps = 37/277 (13%)
Query: 205 WTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIHGLV 264
W L+ V+S +A ++++M G+ D +++ A A+ +ELGKQIH V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIK-PDNYAFPALLKAVADLQDMELGKQIHAHV 123
Query: 265 IALGYE-SCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEET 323
GY + ++N +V++Y KC D A +F R+ ++ VSW S+I + E
Sbjct: 124 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 324 LALYDEMVSAGVKPNEVTFVGLIYACSHVG-----LVGKG------RK------LFKSMI 366
L + M+ V+P+ T V ++ ACS++ ++GK RK + +++
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLV 243
Query: 367 EDYGITPSLQHYTCLL------DLLSRS---GHLDEAENLIKAMPF---------EPDEP 408
YG L LL DL++ + L + E L++A+ + EPDE
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303
Query: 409 TWAALLSACKHHRNTEMGTRVANHLLSLKPEDPSSYI 445
T +++L AC H G + + L D +S++
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFV 340
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/559 (35%), Positives = 324/559 (57%), Gaps = 34/559 (6%)
Query: 54 VQYAHHLLEEMPQRDHVS-WASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLV 112
+ YAH + ++ + +V W +++ Y + S++ M ++PD + L+
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 113 KACGSLGATRLGKQVHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSV 172
KA ++ RLG+ +H+ + S F V++SL+ +YA CG +A VFD + K+ V
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV 188
Query: 173 SWTAMLSAYARSGRKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREG 232
+W ++++ +A +G+ ++A+ + + EM +G
Sbjct: 189 AWNSVINGFAENGKPEEALAL-------------------------------YTEMNSKG 217
Query: 233 VDIVDPLVLSSIVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAA 292
+ D + S++ ACA L LGK++H +I +G L SN ++D+YA+C + A
Sbjct: 218 IK-PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEA 276
Query: 293 KDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLALYDEMVSA-GVKPNEVTFVGLIYACSH 351
K +F M K+ VSWTS+IVG A +G +E + L+ M S G+ P E+TFVG++YACSH
Sbjct: 277 KTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSH 336
Query: 352 VGLVGKGRKLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWA 411
G+V +G + F+ M E+Y I P ++H+ C++DLL+R+G + +A IK+MP +P+ W
Sbjct: 337 CGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWR 396
Query: 412 ALLSACKHHRNTEMGTRVANHLLSLKPEDPSSYILLSNVYASAAMWQHVSKVRKLMSVME 471
LL AC H ++++ +L L+P Y+LLSN+YAS W V K+RK M
Sbjct: 397 TLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDG 456
Query: 472 VKKEPGYSYIEFGKGSHIFYAGETSHPLKDEIFELLTELDAEMKRRGYVPDTSSVLHDME 531
VKK PG+S +E G H F G+ SHP D I+ L E+ ++ GYVP S+V D+E
Sbjct: 457 VKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVE 516
Query: 532 QKEKERQLFWHSERLAVAYGLLKSVPGTVLRVVKNLRVCGDCHIVMKMISRITKREIVVR 591
++EKE + +HSE++A+A+ L+ + + + VVKNLRVC DCH+ +K++S++ REIVVR
Sbjct: 517 EEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVR 576
Query: 592 DATRYHHFKDGKCSCNDFW 610
D +R+HHFK+G CSC D+W
Sbjct: 577 DRSRFHHFKNGSCSCQDYW 595
Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 103/173 (59%), Gaps = 1/173 (0%)
Query: 23 KTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQA 82
+T+H+ +I+ G + N+L+ Y C V A+ + ++MP++D V+W S++ + +
Sbjct: 141 ETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAEN 200
Query: 83 NLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDDDVV 142
P++ +++++ M + ++PD F SL+ AC +GA LGK+VH + +
Sbjct: 201 GKPEEALALYTEMNS-KGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 259
Query: 143 KSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFE 195
+ L+D+YA+CG A+ +FD + KNSVSWT+++ A +G K+A+E+F+
Sbjct: 260 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFK 312
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 134/334 (40%), Gaps = 41/334 (12%)
Query: 10 LRVCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDH 69
L CA+ K +H +IK+GL + N L+D Y +C V+ A L +EM ++
Sbjct: 229 LSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNS 288
Query: 70 VSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLG----K 125
VSW S++ ++ I +F M + + L P F ++ AC G + G +
Sbjct: 289 VSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFR 348
Query: 126 QVHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLK-NSVSWTAMLSAYARS 184
++ + + P + +VD+ A+ G A S+ ++ N V W +L A
Sbjct: 349 RMREEYKIEPRIEH---FGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVH 405
Query: 185 GRKKDA----MEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLV 240
G A ++I + P N L+S + S E R V + +
Sbjct: 406 GDSDLAEFARIQILQLEP--NHSGDYVLLSNMYAS-----------EQRWSDVQKIRKQM 452
Query: 241 LSSIVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAA--KDIFGR 298
L V +++E+G ++H ++ D SD I A K++ GR
Sbjct: 453 LRDGVKKVPGHSLVEVGNRVHEFLMG--------------DKSHPQSDAIYAKLKEMTGR 498
Query: 299 MRRKDVVSWTSIIVGTAQHGQAEETLALYDEMVS 332
+R + V S + + + E + + E ++
Sbjct: 499 LRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIA 532
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust.
Identities = 204/607 (33%), Positives = 341/607 (56%), Gaps = 38/607 (6%)
Query: 10 LRVCARHQIALT-VKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRD 68
L +C H+ +L+ +H I+ G Q L LI Y V YA + ++ +R
Sbjct: 83 LILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRT 142
Query: 69 HVSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGAT----RLG 124
W ++ A A ++ + ++ M + ++ D F + ++KAC + T G
Sbjct: 143 IYVWNALFRALTLAGHGEEVLGLYWKMNRIG-VESDRFTYTYVLKACVASECTVNHLMKG 201
Query: 125 KQVHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARS 184
K++HA + + ++LVDMYA+ G + A VF +
Sbjct: 202 KEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGM------------------ 243
Query: 185 GRKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIV-DPLVLSS 243
PVRN+ W+A+++ ++ +A +F EM RE D + + + S
Sbjct: 244 -------------PVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVS 290
Query: 244 IVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKD 303
++ ACA+ A LE GK IHG ++ G +S L + +A+V MY +C + + +F RM +D
Sbjct: 291 VLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRD 350
Query: 304 VVSWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFK 363
VVSW S+I HG ++ + +++EM++ G P VTFV ++ ACSH GLV +G++LF+
Sbjct: 351 VVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFE 410
Query: 364 SMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEPDEPTWAALLSACKHHRNT 423
+M D+GI P ++HY C++DLL R+ LDEA +++ M EP W +LL +C+ H N
Sbjct: 411 TMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNV 470
Query: 424 EMGTRVANHLLSLKPEDPSSYILLSNVYASAAMWQHVSKVRKLMSVMEVKKEPGYSYIEF 483
E+ R + L +L+P++ +Y+LL+++YA A MW V +V+KL+ ++K PG ++E
Sbjct: 471 ELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEV 530
Query: 484 GKGSHIFYAGETSHPLKDEIFELLTELDAEMKRRGYVPDTSSVLHDMEQKEKERQLFWHS 543
+ + F + + +PL ++I L +L +MK +GY+P T VL+++E +EKER + HS
Sbjct: 531 RRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHS 590
Query: 544 ERLAVAYGLLKSVPGTVLRVVKNLRVCGDCHIVMKMISRITKREIVVRDATRYHHFKDGK 603
E+LA+A+GL+ + G +R+ KNLR+C DCH+ K IS+ ++EI+VRD R+H FK+G
Sbjct: 591 EKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGV 650
Query: 604 CSCNDFW 610
CSC D+W
Sbjct: 651 CSCGDYW 657
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 150/336 (44%), Gaps = 34/336 (10%)
Query: 103 PDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAV 162
P + L+ CG + +VH + + D + + L+ MY+ G + AR V
Sbjct: 75 PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134
Query: 163 FDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAF 222
FD + + W A+ A +G ++ + ++ W G+ E D F
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLY----------WKMNRIGV-----ESDRF 179
Query: 223 -YSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVD 281
Y++ VL + V + L GK+IH + GY S ++I +VD
Sbjct: 180 TYTY--------------VLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVD 225
Query: 282 MYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLALYDEMV--SAGVKPNE 339
MYA+ + A +FG M ++VVSW+++I A++G+A E L + EM+ + PN
Sbjct: 226 MYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNS 285
Query: 340 VTFVGLIYACSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIK 399
VT V ++ AC+ + + +G KL I G+ L + L+ + R G L+ + +
Sbjct: 286 VTMVSVLQACASLAALEQG-KLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFD 344
Query: 400 AMPFEPDEPTWAALLSACKHHRNTEMGTRVANHLLS 435
M + D +W +L+S+ H + ++ +L+
Sbjct: 345 RM-HDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLA 379
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 400 bits (1028), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/605 (34%), Positives = 337/605 (55%), Gaps = 34/605 (5%)
Query: 7 LHRLRVCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQ 66
L+ + VC ++K LH +K + N + +Y KC + YA + +
Sbjct: 399 LNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRS 458
Query: 67 RDHVSWASILTAYNQANLPQKTISIFSTMLALDKLQPDHFVFASLVKACGSLGATRLGKQ 126
+ SW +++ + Q+N P+ ++ M + L PD F SL+ AC L + RLGK+
Sbjct: 459 KTVNSWNALIGGHAQSNDPRLSLDAHLQM-KISGLLPDSFTVCSLLSACSKLKSLRLGKE 517
Query: 127 VHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGR 186
VH + + D V S++ +Y CG +A+FD+++ K+ VSW +++ Y ++G
Sbjct: 518 VHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGF 577
Query: 187 KKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVG 246
A+ +F R + L+ + G+ + + G
Sbjct: 578 PDRALGVF-----RQMVLYGIQLCGIS---------------------------MMPVFG 605
Query: 247 ACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVVS 306
AC+ L LG++ H + E FI+ +++DMYAK I + +F ++ K S
Sbjct: 606 ACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS 665
Query: 307 WTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSMI 366
W ++I+G HG A+E + L++EM G P+++TF+G++ AC+H GL+ +G + M
Sbjct: 666 WNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMK 725
Query: 367 EDYGITPSLQHYTCLLDLLSRSGHLDEAENLI-KAMPFEPDEPTWAALLSACKHHRNTEM 425
+G+ P+L+HY C++D+L R+G LD+A ++ + M E D W +LLS+C+ H+N EM
Sbjct: 726 SSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEM 785
Query: 426 GTRVANHLLSLKPEDPSSYILLSNVYASAAMWQHVSKVRKLMSVMEVKKEPGYSYIEFGK 485
G +VA L L+PE P +Y+LLSN+YA W+ V KVR+ M+ M ++K+ G S+IE +
Sbjct: 786 GEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNR 845
Query: 486 GSHIFYAGETSHPLKDEIFELLTELDAEMKRRGYVPDTSSVLHDMEQKEKERQLFWHSER 545
F GE +EI L + L+ ++ + GY PDT SV HD+ ++EK QL HSE+
Sbjct: 846 KVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEK 905
Query: 546 LAVAYGLLKSVPGTVLRVVKNLRVCGDCHIVMKMISRITKREIVVRDATRYHHFKDGKCS 605
LA+ YGL+K+ GT +RV KNLR+C DCH K+IS++ +REIVVRD R+HHFK+G CS
Sbjct: 906 LALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCS 965
Query: 606 CNDFW 610
C D+W
Sbjct: 966 CGDYW 970
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 147/314 (46%), Gaps = 30/314 (9%)
Query: 40 LPNTLIDAYGKCDLVQYAHHLLEEMPQRDHVSWASILTAYNQANLPQKTISIFSTMLALD 99
L +I Y C + + + + ++ W +++++Y++ L + + F M++
Sbjct: 122 LCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTT 181
Query: 100 KLQPDHFVFASLVKACGSLGATRLGKQVHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNA 159
L PDHF + ++KAC + +G VH V + +D V ++LV Y G +A
Sbjct: 182 DLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDA 241
Query: 160 RAVFDSIKLKNSVSWTAMLSAYARSGRKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEI 219
+FD + +N VSW +M+ ++ +G +++ L+ G + N
Sbjct: 242 LQLFDIMPERNLVSWNSMIRVFSDNGFSEESF----------------LLLGEMMEENGD 285
Query: 220 DAFYSFIEMRREGVDIVDPLVLSSIVGACANFAVLELGKQIHGLVIALGYESCLFISNAI 279
AF + D L +++ CA + LGK +HG + L + L ++NA+
Sbjct: 286 GAF------------MPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNAL 333
Query: 280 VDMYAKCSDIIAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLALYDEMVSAG--VKP 337
+DMY+KC I A+ IF K+VVSW +++ G + G T + +M++ G VK
Sbjct: 334 MDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKA 393
Query: 338 NEVTFVGLIYACSH 351
+EVT + + C H
Sbjct: 394 DEVTILNAVPVCFH 407
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 169/396 (42%), Gaps = 36/396 (9%)
Query: 10 LRVCARHQIALTVKTLHAQIIKLGLHQYGPLPNTLIDAYGKCDLVQYAHHLLEEMPQRDH 69
++ CA +H ++K GL + + N L+ YG V A L + MP+R+
Sbjct: 194 IKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNL 253
Query: 70 VSWASILTAYNQANLPQKTISIFSTMLALD---KLQPDHFVFASLVKACGSLGATRLGKQ 126
VSW S++ ++ +++ + M+ + PD +++ C LGK
Sbjct: 254 VSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKG 313
Query: 127 VHACFVLSPFCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLKNSVSWTAMLSAYARSGR 186
VH V + V+ ++L+DMY+KCG NA+ +F KN VSW M+ ++ G
Sbjct: 314 VHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGD 373
Query: 187 KKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDI-VDPLVLSSIV 245
++ Q M G D+ D + + + V
Sbjct: 374 THGTFDVLRQ-------------------------------MLAGGEDVKADEVTILNAV 402
Query: 246 GACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDIIAAKDIFGRMRRKDVV 305
C + + L K++H + + ++NA V YAKC + A+ +F +R K V
Sbjct: 403 PVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVN 462
Query: 306 SWTSIIVGTAQHGQAEETLALYDEMVSAGVKPNEVTFVGLIYACSHVGLVGKGRKLFKSM 365
SW ++I G AQ +L + +M +G+ P+ T L+ ACS + + G+++ +
Sbjct: 463 SWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFI 522
Query: 366 IEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAM 401
I ++ + L Y +L L G L + L AM
Sbjct: 523 IRNW-LERDLFVYLSVLSLYIHCGELCTVQALFDAM 557
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 148/330 (44%), Gaps = 38/330 (11%)
Query: 111 LVKACGSLGATRLGKQVHACFVLSP-FCDDDVVKSSLVDMYAKCGLPNNARAVFDSIKLK 169
L++A G +G+++H S +DDV+ + ++ MYA CG P+++R VFD+++ K
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 170 NSVSWTAMLSAYARSGRKKDAMEIFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMR 229
N W A++S+Y+R+ + +E +FIEM
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLE-------------------------------TFIEMI 178
Query: 230 REGVDIVDPLVLSSIVGACANFAVLELGKQIHGLVIALGYESCLFISNAIVDMYAKCSDI 289
+ D ++ ACA + + +G +HGLV+ G +F+ NA+V Y +
Sbjct: 179 STTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFV 238
Query: 290 IAAKDIFGRMRRKDVVSWTSIIVGTAQHGQAEETLALYDEMVS----AGVKPNEVTFVGL 345
A +F M +++VSW S+I + +G +EE+ L EM+ P+ T V +
Sbjct: 239 TDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTV 298
Query: 346 IYACSHVGLVGKGRKLFKSMIEDYGITPSLQHYTCLLDLLSRSGHLDEAENLIKAMPFEP 405
+ C+ +G G+ + ++ + L L+D+ S+ G + A+ + K M
Sbjct: 299 LPVCAREREIGLGKGVHGWAVK-LRLDKELVLNNALMDMYSKCGCITNAQMIFK-MNNNK 356
Query: 406 DEPTWAALLSACKHHRNTEMGTRVANHLLS 435
+ +W ++ +T V +L+
Sbjct: 357 NVVSWNTMVGGFSAEGDTHGTFDVLRQMLA 386
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 220,314,452
Number of Sequences: 539616
Number of extensions: 8995856
Number of successful extensions: 28655
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 357
Number of HSP's successfully gapped in prelim test: 84
Number of HSP's that attempted gapping in prelim test: 22003
Number of HSP's gapped (non-prelim): 2156
length of query: 610
length of database: 191,569,459
effective HSP length: 123
effective length of query: 487
effective length of database: 125,196,691
effective search space: 60970788517
effective search space used: 60970788517
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 64 (29.3 bits)