Your job contains 1 sequence.
>037716
MAVSATIPSYGNSTLFRNPINDFKKSPYRAPIFRFKLFSKKIKARHAQNSVFESTDIPLP
TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG
DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA
LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKT
AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL
ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 037716
(354 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2115450 - symbol:GGPS1 "geranylgeranyl pyropho... 952 9.7e-96 1
TAIR|locus:2046283 - symbol:AT2G18620 species:3702 "Arabi... 942 1.1e-94 1
UNIPROTKB|P80042 - symbol:GGPS1 "Geranylgeranyl pyrophosp... 922 1.5e-92 1
TAIR|locus:2089626 - symbol:AT3G14530 "AT3G14530" species... 887 7.5e-89 1
TAIR|locus:2046258 - symbol:GGPS4 "geranylgeranyl pyropho... 884 1.6e-88 1
TAIR|locus:2093832 - symbol:AT3G29430 species:3702 "Arabi... 871 3.7e-87 1
TAIR|locus:2048993 - symbol:GGPS2 "geranylgeranyl pyropho... 863 2.6e-86 1
TAIR|locus:2079028 - symbol:AT3G32040 species:3702 "Arabi... 856 1.4e-85 1
TAIR|locus:2087550 - symbol:AT3G20160 species:3702 "Arabi... 834 3.1e-83 1
TAIR|locus:2010182 - symbol:GGPS6 "geranylgeranyl pyropho... 805 3.7e-80 1
UNIPROTKB|Q74CA9 - symbol:GSU1765 "Trans-isoprenyl diphos... 637 2.3e-62 1
TIGR_CMR|GSU_1765 - symbol:GSU_1765 "geranyltranstransfer... 637 2.3e-62 1
UNIPROTKB|Q81M53 - symbol:ispA "Geranyltranstransferase" ... 557 7.0e-54 1
TIGR_CMR|BA_4402 - symbol:BA_4402 "geranyltranstransferas... 557 7.0e-54 1
UNIPROTKB|Q4K5A6 - symbol:ispA "Geranyltranstransferase" ... 549 4.9e-53 1
UNIPROTKB|Q3AAM7 - symbol:CHY_1988 "Geranyltranstransfera... 530 5.1e-51 1
TIGR_CMR|CHY_1988 - symbol:CHY_1988 "geranyltranstransfer... 530 5.1e-51 1
TIGR_CMR|CPS_1089 - symbol:CPS_1089 "geranyltranstransfer... 491 6.9e-47 1
TIGR_CMR|SO_1526 - symbol:SO_1526 "geranyltranstransferas... 464 5.0e-44 1
UNIPROTKB|P22939 - symbol:ispA "geranyl diphosphate synth... 457 2.8e-43 1
TAIR|locus:2121149 - symbol:GGR "geranylgeranyl reductase... 451 1.2e-42 1
UNIPROTKB|Q9KTL2 - symbol:VC_0890 "Geranyltranstransferas... 445 5.2e-42 1
TIGR_CMR|VC_0890 - symbol:VC_0890 "geranyltranstransferas... 445 5.2e-42 1
UNIPROTKB|Q5LX41 - symbol:ispA "Farnesyl diphosphate synt... 434 7.5e-41 1
TIGR_CMR|SPO_0248 - symbol:SPO_0248 "farnesyl diphosphate... 434 7.5e-41 1
UNIPROTKB|Q0C153 - symbol:ispA "Geranyltranstransferase" ... 428 3.3e-40 1
TIGR_CMR|CJE_1816 - symbol:CJE_1816 "geranyltranstransfer... 345 2.0e-31 1
UNIPROTKB|Q83C74 - symbol:CBU_1255 "Dimethylallyltransfer... 342 4.2e-31 1
TIGR_CMR|CBU_1255 - symbol:CBU_1255 "geranyltranstransfer... 342 4.2e-31 1
TIGR_CMR|GSU_1317 - symbol:GSU_1317 "octaprenyl-diphospha... 291 6.8e-30 2
UNIPROTKB|Q3IPL1 - symbol:idsA3 "Geranylfarnesyl diphosph... 322 5.6e-29 1
TIGR_CMR|ECH_0455 - symbol:ECH_0455 "putative geranyltran... 321 7.1e-29 1
UNIPROTKB|P0A5H8 - symbol:MT3506 "(2E,6E)-farnesyl diphos... 296 1.6e-28 2
TIGR_CMR|ECH_0088 - symbol:ECH_0088 "octaprenyl-diphospha... 300 1.2e-26 1
TAIR|locus:2202940 - symbol:SPS1 "solanesyl diphosphate s... 299 1.5e-26 1
TAIR|locus:2020362 - symbol:SPS2 "solanesyl diphosphate s... 296 3.2e-26 1
UNIPROTKB|Q9KUT1 - symbol:VC_0434 "Octaprenyl-diphosphate... 293 6.6e-26 1
TIGR_CMR|VC_0434 - symbol:VC_0434 "octaprenyl-diphosphate... 293 6.6e-26 1
UNIPROTKB|O66129 - symbol:hexs-b "Hexaprenyl-diphosphate ... 288 2.2e-25 1
TIGR_CMR|SO_3653 - symbol:SO_3653 "octaprenyl-diphosphate... 288 2.2e-25 1
UNIPROTKB|P0AD57 - symbol:ispB "IspB" species:83333 "Esch... 287 2.9e-25 1
TIGR_CMR|APH_1247 - symbol:APH_1247 "octaprenyl-diphospha... 276 4.2e-24 1
UNIPROTKB|Q9UWR6 - symbol:fgs "Geranylfarnesyl diphosphat... 275 5.3e-24 1
TIGR_CMR|CPS_4513 - symbol:CPS_4513 "octaprenyl-diphospha... 270 1.8e-23 1
UNIPROTKB|Q2GL13 - symbol:ispA "Geranyltranstransferase" ... 268 2.9e-23 1
TIGR_CMR|APH_0329 - symbol:APH_0329 "geranyltranstransfer... 268 2.9e-23 1
TIGR_CMR|DET_0389 - symbol:DET_0389 "heptaprenyl diphosph... 238 4.3e-23 2
ZFIN|ZDB-GENE-030131-4430 - symbol:pdss1 "prenyl (decapre... 258 6.2e-22 1
UNIPROTKB|O50410 - symbol:idsB "Geranylgeranyl diphosphat... 255 7.0e-22 1
UNIPROTKB|O06428 - symbol:grcC1 "Heptaprenyl diphosphate ... 250 2.4e-21 1
UNIPROTKB|Q2GD75 - symbol:NSE_0694 "Putative geranyltrans... 246 6.3e-21 1
UNIPROTKB|Q3ACT5 - symbol:hepT "Heptaprenyl diphosphate s... 246 6.3e-21 1
TIGR_CMR|CHY_1206 - symbol:CHY_1206 "heptaprenyl diphosph... 246 6.3e-21 1
TIGR_CMR|NSE_0694 - symbol:NSE_0694 "putative geranyltran... 246 6.3e-21 1
TIGR_CMR|CBU_0382 - symbol:CBU_0382 "octylprenyl diphosph... 245 8.0e-21 1
TIGR_CMR|NSE_0238 - symbol:NSE_0238 "polyprenyl synthetas... 243 1.3e-20 1
UNIPROTKB|Q8PYS1 - symbol:MM_0789 "Geranylfarnesyl diphos... 236 7.2e-20 1
UNIPROTKB|P55785 - symbol:hepT "Heptaprenyl diphosphate s... 235 9.2e-20 1
MGI|MGI:1889278 - symbol:Pdss1 "prenyl (solanesyl) diphos... 243 3.1e-19 1
UNIPROTKB|E1BZW8 - symbol:PDSS1 "Uncharacterized protein"... 239 7.0e-19 1
UNIPROTKB|F6RJN8 - symbol:PDSS1 "Uncharacterized protein"... 240 1.1e-18 1
UNIPROTKB|F1PV51 - symbol:PDSS1 "Uncharacterized protein"... 235 2.7e-18 1
UNIPROTKB|Q5T2R2 - symbol:PDSS1 "Decaprenyl-diphosphate s... 237 2.8e-18 1
ASPGD|ASPL0000038406 - symbol:AN10340 species:162425 "Eme... 231 3.9e-18 2
UNIPROTKB|P31114 - symbol:hepT "Heptaprenyl diphosphate s... 231 6.5e-18 1
UNIPROTKB|Q5LX97 - symbol:ddsA "Decaprenyl diphosphate sy... 228 1.0e-17 1
TIGR_CMR|SPO_0319 - symbol:SPO_0319 "decaprenyl diphospha... 228 1.0e-17 1
UNIPROTKB|F1RTW8 - symbol:PDSS1 "Uncharacterized protein"... 233 1.0e-17 1
TIGR_CMR|BA_1535 - symbol:BA_1535 "heptaprenyl diphosphat... 223 3.3e-17 1
FB|FBgn0051005 - symbol:qless "qless" species:7227 "Droso... 224 1.9e-16 1
SGD|S000000207 - symbol:COQ1 "Hexaprenyl pyrophosphate sy... 137 6.7e-16 3
POMBASE|SPBPJ4664.01 - symbol:dps1 "decaprenyl diphosphat... 212 7.5e-16 2
DICTYBASE|DDB_G0280293 - symbol:coq1 "trans-prenyltransfe... 218 1.2e-15 1
TIGR_CMR|CJE_0645 - symbol:CJE_0645 "polyprenyl synthetas... 206 3.3e-15 1
CGD|CAL0005672 - symbol:orf19.7478 species:5476 "Candida ... 121 4.2e-15 3
WB|WBGene00000761 - symbol:coq-1 species:6239 "Caenorhabd... 208 1.3e-14 1
TAIR|locus:2062315 - symbol:GPS1 "geranyl diphosphate syn... 199 1.9e-13 1
UNIPROTKB|H0YEE6 - symbol:PDSS1 "Decaprenyl-diphosphate s... 162 1.8e-11 1
GENEDB_PFALCIPARUM|PFB0130w - symbol:PFB0130w "polyprenyl... 172 4.2e-10 1
UNIPROTKB|O96130 - symbol:OPP "Octaprenyl pyrophosphate s... 172 4.2e-10 1
WB|WBGene00011058 - symbol:fdps-1 species:6239 "Caenorhab... 133 4.8e-06 1
DICTYBASE|DDB_G0293588 - symbol:ggps1 "geranylgeranyl dip... 131 5.9e-06 1
ZFIN|ZDB-GENE-030131-8742 - symbol:ggps1 "geranylgeranyl ... 103 2.0e-05 2
ASPGD|ASPL0000044272 - symbol:AN1592 species:162425 "Emer... 99 6.5e-05 2
UNIPROTKB|C9J6G3 - symbol:GGPS1 "Geranylgeranyl pyrophosp... 119 6.6e-05 1
UNIPROTKB|C9J7M1 - symbol:GGPS1 "Geranylgeranyl pyrophosp... 119 7.7e-05 1
ASPGD|ASPL0000062493 - symbol:AN0654 species:162425 "Emer... 123 8.1e-05 1
UNIPROTKB|F1NHT9 - symbol:GGPS1 "Uncharacterized protein"... 98 8.2e-05 2
UNIPROTKB|O95749 - symbol:GGPS1 "Geranylgeranyl pyrophosp... 119 0.00013 1
UNIPROTKB|F1RGX0 - symbol:GGPS1 "Uncharacterized protein"... 119 0.00013 1
UNIPROTKB|Q9P885 - symbol:carG "Geranylgeranyl pyrophosph... 119 0.00014 1
CGD|CAL0004110 - symbol:BTS1 species:5476 "Candida albica... 119 0.00016 1
UNIPROTKB|P56966 - symbol:GGPS1 "Geranylgeranyl pyrophosp... 118 0.00017 1
FB|FBgn0019662 - symbol:qm "quemao" species:7227 "Drosoph... 118 0.00022 1
MGI|MGI:1341724 - symbol:Ggps1 "geranylgeranyl diphosphat... 94 0.00025 2
RGD|1359680 - symbol:Ggps1 "geranylgeranyl diphosphate sy... 91 0.00056 2
UNIPROTKB|E2R3P8 - symbol:GGPS1 "Uncharacterized protein"... 90 0.00058 2
>TAIR|locus:2115450 [details] [associations]
symbol:GGPS1 "geranylgeranyl pyrophosphate synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;TAS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IDA] [GO:0009513 "etioplast" evidence=IDA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0019761 "glucosinolate
biosynthetic process" evidence=RCA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
EMBL:AL161590 GO:GO:0016117 EMBL:Z99708 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 EMBL:L25813 IPI:IPI00516537 PIR:F85434
RefSeq:NP_195399.1 UniGene:At.304 ProteinModelPortal:P34802
SMR:P34802 STRING:P34802 PaxDb:P34802 PRIDE:P34802
EnsemblPlants:AT4G36810.1 GeneID:829834 KEGG:ath:AT4G36810
TAIR:At4g36810 InParanoid:P34802 KO:K13789 OMA:MEFAHAV
PhylomeDB:P34802 ProtClustDB:CLSN2915918
BioCyc:ARA:AT4G36810-MONOMER BioCyc:MetaCyc:AT4G36810-MONOMER
BRENDA:2.5.1.29 Genevestigator:P34802 GermOnline:AT4G36810
GO:GO:0009513 GO:GO:0051501 Uniprot:P34802
Length = 371
Score = 952 (340.2 bits), Expect = 9.7e-96, P = 9.7e-96
Identities = 192/299 (64%), Positives = 231/299 (77%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
+F F Y+I KAE VNKALD AV L+ P+KIH+AMRYSLLAGGKRVRP+LCIA+CELVGG
Sbjct: 73 SFDFMSYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGG 132
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
+ES AMPAACA+EMIHTMSLIHDDLP +DND+ RR KP +H+VFGE A+LAGDALLS A
Sbjct: 133 EESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFA 192
Query: 181 LEHVAVNIAG--VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG---KDVSLKELEYI 235
EH+A + VSP RVVRA+ E+ A+G EGLVAG+ VDI+SEG DV L+ LE+I
Sbjct: 193 FEHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFI 252
Query: 236 HVHKTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKT 295
H+HKTA LLE E+ER+R +ARCIGLLFQVVDDILDVTKSS+ELGKT
Sbjct: 253 HLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKT 312
Query: 296 AGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
AGKDL + K TYPK+MG+E ++ FA +L +A ++L F++ K APL LANYIA RQN
Sbjct: 313 AGKDLIADKLTYPKIMGLEKSREFAEKLNREARDQLLGFDSDKVAPLLALANYIAYRQN 371
>TAIR|locus:2046283 [details] [associations]
symbol:AT2G18620 species:3702 "Arabidopsis thaliana"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0016117 EMBL:AC006135 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501 EMBL:DQ446520
EMBL:DQ652999 IPI:IPI00544740 PIR:E84566 RefSeq:NP_179452.1
UniGene:At.52813 ProteinModelPortal:Q9ZU77 SMR:Q9ZU77 STRING:Q9ZU77
EnsemblPlants:AT2G18620.1 GeneID:816377 KEGG:ath:AT2G18620
TAIR:At2g18620 InParanoid:Q9ZU77 OMA:YMIGKAN PhylomeDB:Q9ZU77
Genevestigator:Q9ZU77 Uniprot:Q9ZU77
Length = 347
Score = 942 (336.7 bits), Expect = 1.1e-94, P = 1.1e-94
Identities = 191/296 (64%), Positives = 227/296 (76%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F YMI KA VN+ALD AV L+ P+KIH+A+RYSLLA GKRVRP+LCIA+CELVGG+
Sbjct: 53 FDFTSYMIGKANAVNEALDSAVSLREPIKIHEAIRYSLLARGKRVRPVLCIAACELVGGE 112
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
ES A+PAACA+EMIHTMSLIHDDLP +DND+ RR KP +H+VFGE A+LAGDAL+S A
Sbjct: 113 ESVALPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALISFAF 172
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG---KDVSLKELEYIHVH 238
EH+A + A VSP RVVRAI E+ A+G +GLVAG+ VD+ S G DV L+ LE+IHVH
Sbjct: 173 EHLATSTA-VSPARVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEVLEFIHVH 231
Query: 239 KTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KTA LLE EVE++R +ARCIGLLFQVVDDILDVTKSSEELGKTAGK
Sbjct: 232 KTAVLLEAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGK 291
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
DL + K TYPKLMG+E +K FA +LL A E+L F++S+ PL LANYIA RQN
Sbjct: 292 DLIADKLTYPKLMGLEKSKDFADKLLSDAHEQLHGFDSSRVKPLLALANYIAKRQN 347
>UNIPROTKB|P80042 [details] [associations]
symbol:GGPS1 "Geranylgeranyl pyrophosphate synthase,
chloroplastic" species:4072 "Capsicum annuum" [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0004311
"farnesyltranstransferase activity" evidence=IDA] [GO:0004337
"geranyltranstransferase activity" evidence=IDA] [GO:0006720
"isoprenoid metabolic process" evidence=IDA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 GO:GO:0009507 GO:GO:0009536 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386
GO:GO:0006720 EMBL:X80267 PIR:S53722 ProteinModelPortal:P80042
SMR:P80042 BioCyc:MetaCyc:MONOMER-12171 Uniprot:P80042
Length = 369
Score = 922 (329.6 bits), Expect = 1.5e-92, P = 1.5e-92
Identities = 192/352 (54%), Positives = 243/352 (69%)
Query: 12 NSTLFRNPINDFKKSPYRAPIFRFKLFSKK------IKA--RHAQNSVFESTDIPLPTFP 63
N TL N F K P + KL K+ + A ++ E+ P F
Sbjct: 19 NQTLSYKSFNGFMKIPLKNSKINPKLNKKRPFSPLTVSAIATTKEDERIEAAQTEEP-FN 77
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
F+ Y+ KA VNKALDEA++++ P IH+AMRYSLLAGGKRVRP+LC+A+CELVGG++
Sbjct: 78 FKIYVTEKAISVNKALDEAIIVKEPHVIHEAMRYSLLAGGKRVRPMLCLAACELVGGNQE 137
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
AM AACA+EMIHTMSLIHDDLP +DND+ RR KP +H+++GE A+LAGD+LL+ A EH
Sbjct: 138 NAMAAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDSLLAFAFEH 197
Query: 184 VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKTAK 242
+ + AGV+P R+V A+AE+ ++G EGLVAG+ DI G VSL+ LE+IHVHKTA
Sbjct: 198 IVNSTAGVTPSRIVGAVAELAKSIGTEGLVAGQVADIKCTGNASVSLETLEFIHVHKTAA 257
Query: 243 LLEXXXXXXXXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
LLE +EVE++R +ARCIGLLFQVVDDILDVTKSSEELGKTAGKDL
Sbjct: 258 LLESSVVLGAILGGGTNVEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLVV 317
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TYPKL+G+E AK FA EL +A ++L F++ KAAPL LA+YIA R N
Sbjct: 318 DKTTYPKLLGLEKAKEFAAELNREAKQQLEGFDSRKAAPLIALADYIAYRDN 369
>TAIR|locus:2089626 [details] [associations]
symbol:AT3G14530 "AT3G14530" species:3702 "Arabidopsis
thaliana" [GO:0004311 "farnesyltranstransferase activity"
evidence=ISS] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 EMBL:AB023038 KO:K13789 GO:GO:0051501
EMBL:BT010463 IPI:IPI00517639 RefSeq:NP_188071.1 UniGene:At.48659
ProteinModelPortal:Q9LUE1 SMR:Q9LUE1 STRING:Q9LUE1
EnsemblPlants:AT3G14530.1 GeneID:820678 KEGG:ath:AT3G14530
TAIR:At3g14530 InParanoid:Q9LUE1 PhylomeDB:Q9LUE1
ProtClustDB:CLSN2682670 Genevestigator:Q9LUE1 Uniprot:Q9LUE1
Length = 360
Score = 887 (317.3 bits), Expect = 7.5e-89, P = 7.5e-89
Identities = 179/297 (60%), Positives = 226/297 (76%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F+ YMIRKAE VN ALD +V L P+ I +A+RYSLLAGGKRVRPLLCIA+CELVGGD
Sbjct: 64 FDFKLYMIRKAESVNAALDVSVPLLKPLTIQEAVRYSLLAGGKRVRPLLCIAACELVGGD 123
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
E+ AM AACA+EMIHT SLIHDDLP +DN + RR KP +H+V+GE A+LAGDALL+LA
Sbjct: 124 EATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAF 183
Query: 182 EHVAVNIAG-VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASE--GKD-VSLKELEYIHV 237
EH+ V +G V+P++++RA+ E+ A+G GLVAG+ +D+ASE D V L+ LE+IH+
Sbjct: 184 EHMTVVSSGLVAPEKMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHL 243
Query: 238 HKTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
HKTA LLE E+E++R YARCIGLLFQVVDDILDVTKS+EELGKTAG
Sbjct: 244 HKTAALLEAAAVLGVIMGGGTEQEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAG 303
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
KD+ +GK TYP+L+G+E ++ A +L +A E+L F+ SKAAPL LA+YIA R N
Sbjct: 304 KDVMAGKLTYPRLIGLEGSREVAEKLRREAEEQLLGFDPSKAAPLVALASYIACRHN 360
>TAIR|locus:2046258 [details] [associations]
symbol:GGPS4 "geranylgeranyl pyrophosphate synthase 4"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;ISS;TAS] [GO:0004311
"farnesyltranstransferase activity" evidence=IGI;IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005783 GO:GO:0005739
GO:GO:0009536 EMBL:CP002685 GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
EMBL:AC006135 EMBL:AC005724 eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 ProtClustDB:CLSN2912871 EMBL:DQ446521 EMBL:L22347
IPI:IPI00546039 PIR:G84566 RefSeq:NP_179454.1 UniGene:At.66219
ProteinModelPortal:Q9SLG2 SMR:Q9SLG2 STRING:Q9SLG2
EnsemblPlants:AT2G18640.1 GeneID:816379 KEGG:ath:AT2G18640
TAIR:At2g18640 InParanoid:Q9SLG2 OMA:DIHANKT PhylomeDB:Q9SLG2
BioCyc:ARA:AT2G18640-MONOMER BioCyc:MetaCyc:AT2G18640-MONOMER
Genevestigator:Q9SLG2 Uniprot:Q9SLG2
Length = 372
Score = 884 (316.2 bits), Expect = 1.6e-88, P = 1.6e-88
Identities = 182/334 (54%), Positives = 236/334 (70%)
Query: 27 PYRAPIFRFKLFSKKIKARHAQNS---VFESTDIPLPTFPFEEYMIRKAEQVNKALDEAV 83
P ++P+ +F++K +S V E D +F F+ YMI KAE +N+ALDEA+
Sbjct: 43 PIKSPVAA-AIFARKDTREFLDSSIKLVNEEDDFGF-SFDFKPYMISKAETINRALDEAI 100
Query: 84 VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHD 143
L P+ IHKAMRY++LAGGKRVRP+LC+A+CELVGG+E A+ AACA+EMIHTMSLI D
Sbjct: 101 PLIEPLNIHKAMRYAILAGGKRVRPILCLAACELVGGEERLAIQAACAVEMIHTMSLIKD 160
Query: 144 DLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEM 203
DLP +DND+ RR KP +H+VFGES AIL+G ALL+LA EH+ A VS ++VRA+ E+
Sbjct: 161 DLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLTE--ADVSSKKMVRAVKEL 218
Query: 204 CSAMGVEGLVAGEFVDIASEG---KDVSLKELEYIHVHKTAKLLEXXXXXXXXXXXXXXI 260
++G +GLVAG+ D++SEG DV L++LEYIHVHKT LLE
Sbjct: 219 AKSIGTKGLVAGQAKDLSSEGLEQNDVGLEDLEYIHVHKTGSLLEASAVIGAVIGGGTEK 278
Query: 261 EVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFA 320
E+E+VRN+ARCIGLLFQVVDDILD TKSSEELGKTAGKD +GK TYPK++G+E +K F
Sbjct: 279 EIEKVRNFARCIGLLFQVVDDILDETKSSEELGKTAGKDKVAGKLTYPKVIGVEKSKEFV 338
Query: 321 GELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+L A E L F++ K PL L N+IA+R +
Sbjct: 339 EKLKRDAREHLQGFDSDKVKPLIALTNFIANRNH 372
>TAIR|locus:2093832 [details] [associations]
symbol:AT3G29430 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=RCA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
EMBL:AP001309 GO:GO:0016117 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 ProtClustDB:CLSN2682670 EMBL:DQ056612 IPI:IPI00540813
RefSeq:NP_189589.1 UniGene:At.53571 ProteinModelPortal:Q9LIA0
SMR:Q9LIA0 STRING:Q9LIA0 EnsemblPlants:AT3G29430.1 GeneID:822604
KEGG:ath:AT3G29430 TAIR:At3g29430 InParanoid:Q9LIA0 OMA:NDRNSAF
PhylomeDB:Q9LIA0 Genevestigator:Q9LIA0 Uniprot:Q9LIA0
Length = 357
Score = 871 (311.7 bits), Expect = 3.7e-87, P = 3.7e-87
Identities = 173/297 (58%), Positives = 224/297 (75%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F+ YMIRKAE V+ AL+ +V LQ P+ I +A+RYSLLAGGKRVRPLLCIA+CELVGGD
Sbjct: 61 FDFKSYMIRKAESVSAALNVSVPLQEPLTIQEAVRYSLLAGGKRVRPLLCIAACELVGGD 120
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
E+ AM AACA+EMIHT SLIHDDLP +D+ + RR KP +H+ FGE A+LAGDALL+LA
Sbjct: 121 EATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKEFGEDMAVLAGDALLALAF 180
Query: 182 EHVAVNIAG-VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG---KDVSLKELEYIHV 237
EH+ G V+P+R++RA+ E+ A+G +GLVAG+ D+ S+G DV L+ LE+IH+
Sbjct: 181 EHMTFVSNGLVAPERMIRAVMELAKAIGTKGLVAGQVTDLCSQGLNPDDVGLERLEFIHL 240
Query: 238 HKTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
HKTA LLE E+E++R YARCIGLLFQVVDDILDVT+S++ELGKTAG
Sbjct: 241 HKTAALLEAAAVLGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTESTKELGKTAG 300
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
KD+ +GK TYP+L+G+E ++ A +L +A E+L F++ KAAPL LA+YIA R N
Sbjct: 301 KDVMAGKLTYPRLIGLERSREVAEKLRREAAEQLLGFDSDKAAPLVALASYIACRHN 357
>TAIR|locus:2048993 [details] [associations]
symbol:GGPS2 "geranylgeranyl pyrophosphate synthase 2"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;TAS] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0006744 "ubiquinone biosynthetic
process" evidence=RCA] [GO:0004311 "farnesyltranstransferase
activity" evidence=IGI;IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005783 GO:GO:0005739
GO:GO:0009536 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0016117 EMBL:AC004482 eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501 EMBL:U44876
EMBL:BT005328 EMBL:AK117954 EMBL:AY087521 EMBL:D85029
IPI:IPI00535829 PIR:S71230 PIR:T02429 RefSeq:NP_179960.1
UniGene:At.1550 ProteinModelPortal:O04046 SMR:O04046 STRING:O04046
PaxDb:O04046 PRIDE:O04046 EnsemblPlants:AT2G23800.1 GeneID:816912
KEGG:ath:AT2G23800 TAIR:At2g23800 InParanoid:O04046 OMA:QSMKTGA
PhylomeDB:O04046 ProtClustDB:CLSN2912871
BioCyc:ARA:AT2G23800-MONOMER BioCyc:MetaCyc:AT2G23800-MONOMER
Genevestigator:O04046 GermOnline:AT2G23800 Uniprot:O04046
Length = 376
Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
Identities = 174/295 (58%), Positives = 216/295 (73%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
TF F+ YM+ KAE VNKAL+EA+ + P+KIH+AMRY++LA GKRVRP+LC+ASCELVGG
Sbjct: 82 TFEFDPYMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGG 141
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
E+ AMPAACA+EMIHTMSLI DDLP +DND+ RR KP +H+V+GE AIL+G ALLSLA
Sbjct: 142 QENAAMPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLA 201
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKD---VSLKELEYIHV 237
EH+ A +S +R+V A+ E+ ++G GLVAG+ +DI+SEG D V L+ LE+IHV
Sbjct: 202 FEHMTT--AEISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFIHV 259
Query: 238 HKTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
HKTA LLE E+E VR +ARCIGLLFQVVDDILD TKSSEELGKTAG
Sbjct: 260 HKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGKTAG 319
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
KD +GK TYPKL+G+E +K F L A + L F + K APL L +IA+R
Sbjct: 320 KDQLAGKLTYPKLIGLEKSKEFVKRLTKDARQHLQGFSSEKVAPLVALTTFIANR 374
>TAIR|locus:2079028 [details] [associations]
symbol:AT3G32040 species:3702 "Arabidopsis thaliana"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0016117 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 ProtClustDB:CLSN2682670 EMBL:AP002033 EMBL:BT015110
EMBL:AK221451 IPI:IPI00544436 RefSeq:NP_189747.1 UniGene:At.50761
ProteinModelPortal:Q9LHR4 SMR:Q9LHR4 STRING:Q9LHR4 PRIDE:Q9LHR4
EnsemblPlants:AT3G32040.1 GeneID:822957 KEGG:ath:AT3G32040
TAIR:At3g32040 InParanoid:Q9LHR4 PhylomeDB:Q9LHR4
Genevestigator:Q9LHR4 Uniprot:Q9LHR4
Length = 360
Score = 856 (306.4 bits), Expect = 1.4e-85, P = 1.4e-85
Identities = 169/297 (56%), Positives = 224/297 (75%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F+ YMIRKAE V+ AL+ +V Q P+ I +A+RYSLLAGGKRVRPLLCIA+CELVGGD
Sbjct: 64 FDFKSYMIRKAESVSMALNVSVPPQDPLAIQEAVRYSLLAGGKRVRPLLCIAACELVGGD 123
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
E+ AM AACA+EMIHT SLIHDDLP +D+ + RR KP +H+VFGE A+LAGDALL+LA
Sbjct: 124 EATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKVFGEHMAVLAGDALLALAF 183
Query: 182 EHVAVNIAG-VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK---DVSLKELEYIHV 237
EH+ V +G V+P+R++R++ E+ A+G +GLVAG+ D+ S+G DV L+ LE+IH+
Sbjct: 184 EHMTVVSSGLVAPERMIRSVTELAKAIGTKGLVAGQVSDLCSQGLNPYDVGLERLEFIHL 243
Query: 238 HKTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
HKTA LLE E++++R Y RCIGLLFQVVDDI+DVT+S+EELGKTAG
Sbjct: 244 HKTAALLEAAAVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDIIDVTESTEELGKTAG 303
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
KD+ + K TYP+L+G+E ++ A +L +A E+L F+++K APL LA+YIA R N
Sbjct: 304 KDVMARKLTYPRLIGLERSREVAEKLRREAAEQLLGFDSNKVAPLVALASYIACRHN 360
>TAIR|locus:2087550 [details] [associations]
symbol:AT3G20160 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;ISS] [GO:0006744 "ubiquinone
biosynthetic process" evidence=RCA] [GO:0004311
"farnesyltranstransferase activity" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009536 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 EMBL:AP000383 GO:GO:0016117 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501
ProtClustDB:CLSN2913613 EMBL:DQ446678 EMBL:DQ653096 IPI:IPI00537582
RefSeq:NP_188651.1 UniGene:At.53400 ProteinModelPortal:Q9LJY2
SMR:Q9LJY2 STRING:Q9LJY2 EnsemblPlants:AT3G20160.1 GeneID:821560
KEGG:ath:AT3G20160 TAIR:At3g20160 InParanoid:Q9LJY2 OMA:RSYARCI
PhylomeDB:Q9LJY2 Genevestigator:Q9LJY2 Uniprot:Q9LJY2
Length = 344
Score = 834 (298.6 bits), Expect = 3.1e-83, P = 3.1e-83
Identities = 171/299 (57%), Positives = 215/299 (71%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVL-QPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
F F YM+ KA+ VNKAL+EAV L +P +KI +AMRY+LL+ GKRVRP+LC+A+CELVGG
Sbjct: 48 FKFMSYMVNKAKSVNKALEEAVPLREPELKIREAMRYTLLSDGKRVRPMLCLAACELVGG 107
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
ES AM AACA+EM+H SLI DDLP +DND RR KP +H VFGES AILA AL++LA
Sbjct: 108 QESTAMSAACAIEMLHASSLILDDLPCMDNDSLRRGKPTNHIVFGESIAILASQALIALA 167
Query: 181 LEHVAVN-IAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG----KDVSLKELEYI 235
++ + A V P+R+++ + EM A VEGLVAG+ D+A EG D L+ LE+I
Sbjct: 168 VQKTTSSTFADVPPERILKTVQEMVKA--VEGLVAGQQADLAGEGMRFDSDTGLEHLEFI 225
Query: 236 HVHKTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKT 295
H+HKTA LLE E+ER+R+YARCIGL+FQVVDD+LDVTKSSEELGKT
Sbjct: 226 HIHKTAALLEAAAVMGAIMGGGSDEEIERLRSYARCIGLMFQVVDDVLDVTKSSEELGKT 285
Query: 296 AGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
AGKDL +GK TYP+LMG+E +K +A L +A E L F+ K APL LA+YI +RQN
Sbjct: 286 AGKDLIAGKLTYPRLMGVEKSKEYAERLNIEAREHLLGFDIDKVAPLVSLADYIVNRQN 344
>TAIR|locus:2010182 [details] [associations]
symbol:GGPS6 "geranylgeranyl pyrophosphate synthase 6"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;ISS;TAS] [GO:0006744 "ubiquinone biosynthetic process"
evidence=RCA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IGI;IDA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 GO:GO:0009536 GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
EMBL:AC007504 eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 EMBL:AB000835 EMBL:BT011230 EMBL:BT012158
IPI:IPI00537288 RefSeq:NP_175376.1 UniGene:At.38214
UniGene:At.49962 ProteinModelPortal:O22043 SMR:O22043 STRING:O22043
EnsemblPlants:AT1G49530.1 GeneID:841377 KEGG:ath:AT1G49530
TAIR:At1g49530 InParanoid:O22043 OMA:LCLVACE PhylomeDB:O22043
ProtClustDB:CLSN2913613 Genevestigator:O22043 GermOnline:AT1G49530
Uniprot:O22043
Length = 336
Score = 805 (288.4 bits), Expect = 3.7e-80, P = 3.7e-80
Identities = 163/305 (53%), Positives = 215/305 (70%)
Query: 64 FEEYMIRKAEQVNKALDEAVVL--------QPPVKIHKAMRYSLLAGGKRVRPLLCIASC 115
F YM KA+ +NKALD ++ L +P +++HKAMRY+LL GGKRVRP+LC+ +C
Sbjct: 32 FISYMKNKAKSINKALDNSIPLCNNFVPLWEPVLEVHKAMRYTLLPGGKRVRPMLCLVAC 91
Query: 116 ELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDA 175
ELVGG ES AMPAACA+EMIH SLI DDLP +D+D RR KP +H+VFGE T+ILA +A
Sbjct: 92 ELVGGQESTAMPAACAVEMIHAASLILDDLPCMDDDSLRRGKPTNHKVFGEKTSILASNA 151
Query: 176 LLSLALEHVAVNIA-GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASE-----GKDVSL 229
L SLA++ + + GV+ +RV+RA+ EM A+G EGLVAG+ D+A E +D L
Sbjct: 152 LRSLAVKQTLASTSLGVTSERVLRAVQEMARAVGTEGLVAGQAADLAGERMSFKNEDDEL 211
Query: 230 KELEYIHVHKTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSS 289
+ LE +HVHKTA L+E E+ER+++YARC+GL+FQV+DD+LD TKSS
Sbjct: 212 RYLELMHVHKTAVLVEAAAVVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDVLDETKSS 271
Query: 290 EELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYI 349
EELGKTAGKDL +GK TYPK+MG++NA+ +A L +A E L F++ K PL LA+YI
Sbjct: 272 EELGKTAGKDLITGKLTYPKVMGVDNAREYAKRLNREAQEHLQGFDSDKVVPLLSLADYI 331
Query: 350 ASRQN 354
RQN
Sbjct: 332 VKRQN 336
>UNIPROTKB|Q74CA9 [details] [associations]
symbol:GSU1765 "Trans-isoprenyl diphosphate synthase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000009101 GO:GO:0004337 KO:K13789
RefSeq:NP_952815.1 ProteinModelPortal:Q74CA9 GeneID:2685235
KEGG:gsu:GSU1765 PATRIC:22026373 OMA:RRGNPTN ProtClustDB:CLSK828537
BioCyc:GSUL243231:GH27-1760-MONOMER Uniprot:Q74CA9
Length = 297
Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
Identities = 133/293 (45%), Positives = 189/293 (64%)
Query: 67 YMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW 124
Y+ + V++AL+ + + P +H+AMRYS+ AGGKRVRP+L +A+C+ VGGD +
Sbjct: 6 YLKERCALVDEALERHLPAEDELPSSVHRAMRYSVFAGGKRVRPILMLAACDAVGGDTAL 65
Query: 125 AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV 184
A+PAACA+EMIHT SLIHDDLP +D+D+ RR +P +H+VFGE+ AILAGDALL+ A +
Sbjct: 66 ALPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDALLTEAFILI 125
Query: 185 AVN--IAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVHKTA 241
+ A V DR++ I E+ G G+V G+ VD+ SEG K++ L ++YIH KT
Sbjct: 126 SSPSYAAAVGSDRLLPVIHEIALCAGSRGMVGGQVVDMESEGNKEIDLATVQYIHTRKTG 185
Query: 242 KLLEXXXXXXXXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
L++ V+ V Y IGL FQ+ DDILD+ ++E++GK AG D A
Sbjct: 186 ALIKASIKAGAVLGGANADAVKAVTRYGEAIGLAFQIADDILDIEGTTEQIGKDAGSDEA 245
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
GKATYP ++G+ +K A ELL AIE L+ F+ +A PL +A YI SR++
Sbjct: 246 RGKATYPAVLGLAESKRRAQELLDLAIEALSPFD-HRADPLREIARYIVSRKS 297
>TIGR_CMR|GSU_1765 [details] [associations]
symbol:GSU_1765 "geranyltranstransferase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 KO:K13789 RefSeq:NP_952815.1
ProteinModelPortal:Q74CA9 GeneID:2685235 KEGG:gsu:GSU1765
PATRIC:22026373 OMA:RRGNPTN ProtClustDB:CLSK828537
BioCyc:GSUL243231:GH27-1760-MONOMER Uniprot:Q74CA9
Length = 297
Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
Identities = 133/293 (45%), Positives = 189/293 (64%)
Query: 67 YMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW 124
Y+ + V++AL+ + + P +H+AMRYS+ AGGKRVRP+L +A+C+ VGGD +
Sbjct: 6 YLKERCALVDEALERHLPAEDELPSSVHRAMRYSVFAGGKRVRPILMLAACDAVGGDTAL 65
Query: 125 AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV 184
A+PAACA+EMIHT SLIHDDLP +D+D+ RR +P +H+VFGE+ AILAGDALL+ A +
Sbjct: 66 ALPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDALLTEAFILI 125
Query: 185 AVN--IAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVHKTA 241
+ A V DR++ I E+ G G+V G+ VD+ SEG K++ L ++YIH KT
Sbjct: 126 SSPSYAAAVGSDRLLPVIHEIALCAGSRGMVGGQVVDMESEGNKEIDLATVQYIHTRKTG 185
Query: 242 KLLEXXXXXXXXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
L++ V+ V Y IGL FQ+ DDILD+ ++E++GK AG D A
Sbjct: 186 ALIKASIKAGAVLGGANADAVKAVTRYGEAIGLAFQIADDILDIEGTTEQIGKDAGSDEA 245
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
GKATYP ++G+ +K A ELL AIE L+ F+ +A PL +A YI SR++
Sbjct: 246 RGKATYPAVLGLAESKRRAQELLDLAIEALSPFD-HRADPLREIARYIVSRKS 297
>UNIPROTKB|Q81M53 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:1392
"Bacillus anthracis" [GO:0045337 "farnesyl diphosphate biosynthetic
process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K13789
RefSeq:NP_846630.1 RefSeq:YP_021045.1 RefSeq:YP_030332.1
ProteinModelPortal:Q81M53 DNASU:1087728
EnsemblBacteria:EBBACT00000008555 EnsemblBacteria:EBBACT00000017694
EnsemblBacteria:EBBACT00000019296 GeneID:1087728 GeneID:2819990
GeneID:2851738 KEGG:ban:BA_4402 KEGG:bar:GBAA_4402 KEGG:bat:BAS4082
OMA:FACAVEM ProtClustDB:CLSK917292
BioCyc:BANT260799:GJAJ-4139-MONOMER
BioCyc:BANT261594:GJ7F-4282-MONOMER Uniprot:Q81M53
Length = 296
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 119/296 (40%), Positives = 175/296 (59%)
Query: 61 TFPFEEYMIRKAEQVN-KALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
T F+ ++ V K + A LQ P + +AM YSL AGGKR+RPLL A+ +
Sbjct: 2 TIAFDTFLKESKTFVEEKLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFD 61
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
+ + + AACALEMIHT SL+HDDLP +D+D+ RR KP +H+VFGE+ A+LAGD LL+
Sbjct: 62 KERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTY 121
Query: 180 ALEHV-AVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
A + + A +S ++ VR + E+ A G EG+V G+ D+ +EGK +++ ELEYIH H
Sbjct: 122 AFQVIMAYGQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKH 181
Query: 239 KTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT KLLE + E++ +A+ IGL FQ+ DDILDV + EE+GK G
Sbjct: 182 KTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGS 241
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
D+++ K+TY L ++ AK E + +A + + + L + + IA R N
Sbjct: 242 DVSNEKSTYTTLFTVDRAKDILDETIAKAKDAIGSLQLQDEY-LLSICDLIAKRNN 296
>TIGR_CMR|BA_4402 [details] [associations]
symbol:BA_4402 "geranyltranstransferase" species:198094
"Bacillus anthracis str. Ames" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K13789
RefSeq:NP_846630.1 RefSeq:YP_021045.1 RefSeq:YP_030332.1
ProteinModelPortal:Q81M53 DNASU:1087728
EnsemblBacteria:EBBACT00000008555 EnsemblBacteria:EBBACT00000017694
EnsemblBacteria:EBBACT00000019296 GeneID:1087728 GeneID:2819990
GeneID:2851738 KEGG:ban:BA_4402 KEGG:bar:GBAA_4402 KEGG:bat:BAS4082
OMA:FACAVEM ProtClustDB:CLSK917292
BioCyc:BANT260799:GJAJ-4139-MONOMER
BioCyc:BANT261594:GJ7F-4282-MONOMER Uniprot:Q81M53
Length = 296
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 119/296 (40%), Positives = 175/296 (59%)
Query: 61 TFPFEEYMIRKAEQVN-KALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
T F+ ++ V K + A LQ P + +AM YSL AGGKR+RPLL A+ +
Sbjct: 2 TIAFDTFLKESKTFVEEKLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFD 61
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
+ + + AACALEMIHT SL+HDDLP +D+D+ RR KP +H+VFGE+ A+LAGD LL+
Sbjct: 62 KERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTY 121
Query: 180 ALEHV-AVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
A + + A +S ++ VR + E+ A G EG+V G+ D+ +EGK +++ ELEYIH H
Sbjct: 122 AFQVIMAYGQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKH 181
Query: 239 KTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT KLLE + E++ +A+ IGL FQ+ DDILDV + EE+GK G
Sbjct: 182 KTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGS 241
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
D+++ K+TY L ++ AK E + +A + + + L + + IA R N
Sbjct: 242 DVSNEKSTYTTLFTVDRAKDILDETIAKAKDAIGSLQLQDEY-LLSICDLIAKRNN 296
>UNIPROTKB|Q4K5A6 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:220664
"Pseudomonas protegens Pf-5" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000076
GenomeReviews:CP000076_GR eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337
KO:K13789 OMA:DLISEHK RefSeq:YP_262577.1 PDB:3LJI PDB:3LSN PDB:3P41
PDBsum:3LJI PDBsum:3LSN PDBsum:3P41 ProteinModelPortal:Q4K5A6
STRING:Q4K5A6 DNASU:3479897 GeneID:3479897 KEGG:pfl:PFL_5509
PATRIC:19880507 ProtClustDB:CLSK868404
BioCyc:PFLU220664:GIX8-5546-MONOMER EvolutionaryTrace:Q4K5A6
Uniprot:Q4K5A6
Length = 295
Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
Identities = 120/292 (41%), Positives = 171/292 (58%)
Query: 67 YMIRKAEQVNKALDEAVVLQPP--VKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW 124
Y +V+ A+ P ++++AMRYS++ GGKRVRPLL A+CE +GG
Sbjct: 5 YQASSQARVDAAMHTLFTAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGKPEQ 64
Query: 125 AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV 184
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA +
Sbjct: 65 ANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSAL 124
Query: 185 A-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
++ S + +R + + A G G+V G+ +D+ S G + + LEY+H HKT L
Sbjct: 125 LDPALSDASAEIRLRMVTTLAQAAGPAGMVGGQAIDLGSVGLKLDQQALEYMHRHKTGAL 184
Query: 244 LEXXXXXXXXXXXXXXI-EVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
+E E++ ++ YA+ IGL FQV DDILDV + LGK G D+A
Sbjct: 185 IEASVILGALASGRAEKGELKALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIAR 244
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TYP L+G+ AK +A EL QA+ L F+A+ A PL LA YI R++
Sbjct: 245 DKPTYPALLGLAAAKEYALELRDQALHALRPFDAA-AEPLRELARYIVERRS 295
>UNIPROTKB|Q3AAM7 [details] [associations]
symbol:CHY_1988 "Geranyltranstransferase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K13789 OMA:NITEECI RefSeq:YP_360807.1
ProteinModelPortal:Q3AAM7 STRING:Q3AAM7 GeneID:3727552
KEGG:chy:CHY_1988 PATRIC:21277063
BioCyc:CHYD246194:GJCN-1987-MONOMER Uniprot:Q3AAM7
Length = 295
Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
Identities = 118/269 (43%), Positives = 163/269 (60%)
Query: 87 PPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLP 146
PPV IH+AM YSL AGGKR+RP+L +A+ E G +PAA +E +HT SLIHDDLP
Sbjct: 29 PPV-IHQAMNYSLKAGGKRLRPVLMLAAGEWSGIAPEKLLPAAVGVECLHTYSLIHDDLP 87
Query: 147 FLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIA-GVSPDRVVRAIAEMCS 205
+DND+ RR KP +H+VFGE+ AILAGDALL+ A E A + G+ +RVVR I E+
Sbjct: 88 AMDNDDFRRGKPTNHKVFGEAIAILAGDALLTKAFELTAKTLEQGIPAERVVRVIQELAV 147
Query: 206 AMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEXXXXXXXXXXXXXXIEVERV 265
A G EGL+AG+ VD++S + L YIH++KTA+L+ E++ +
Sbjct: 148 ASGSEGLIAGQVVDLSSSEAKKDPEVLLYIHLNKTARLIRYSLIAGGILAGATEEEIKAL 207
Query: 266 RNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLG 325
+Y R +GL FQ+VDD+LDV +++GK G D + K TY L GIE K A E +
Sbjct: 208 DDYGRHLGLAFQIVDDLLDVVGDFQKIGKPVGSDEKNQKLTYVSLFGIEETKKRAEEEIN 267
Query: 326 QAIEELAYFEASKAAPLYFLANYIASRQN 354
A L + K++ LA +I R++
Sbjct: 268 AAKNVLKPY-GEKSSFFIKLAEFILKRES 295
>TIGR_CMR|CHY_1988 [details] [associations]
symbol:CHY_1988 "geranyltranstransferase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K13789 OMA:NITEECI RefSeq:YP_360807.1
ProteinModelPortal:Q3AAM7 STRING:Q3AAM7 GeneID:3727552
KEGG:chy:CHY_1988 PATRIC:21277063
BioCyc:CHYD246194:GJCN-1987-MONOMER Uniprot:Q3AAM7
Length = 295
Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
Identities = 118/269 (43%), Positives = 163/269 (60%)
Query: 87 PPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLP 146
PPV IH+AM YSL AGGKR+RP+L +A+ E G +PAA +E +HT SLIHDDLP
Sbjct: 29 PPV-IHQAMNYSLKAGGKRLRPVLMLAAGEWSGIAPEKLLPAAVGVECLHTYSLIHDDLP 87
Query: 147 FLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIA-GVSPDRVVRAIAEMCS 205
+DND+ RR KP +H+VFGE+ AILAGDALL+ A E A + G+ +RVVR I E+
Sbjct: 88 AMDNDDFRRGKPTNHKVFGEAIAILAGDALLTKAFELTAKTLEQGIPAERVVRVIQELAV 147
Query: 206 AMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEXXXXXXXXXXXXXXIEVERV 265
A G EGL+AG+ VD++S + L YIH++KTA+L+ E++ +
Sbjct: 148 ASGSEGLIAGQVVDLSSSEAKKDPEVLLYIHLNKTARLIRYSLIAGGILAGATEEEIKAL 207
Query: 266 RNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLG 325
+Y R +GL FQ+VDD+LDV +++GK G D + K TY L GIE K A E +
Sbjct: 208 DDYGRHLGLAFQIVDDLLDVVGDFQKIGKPVGSDEKNQKLTYVSLFGIEETKKRAEEEIN 267
Query: 326 QAIEELAYFEASKAAPLYFLANYIASRQN 354
A L + K++ LA +I R++
Sbjct: 268 AAKNVLKPY-GEKSSFFIKLAEFILKRES 295
>TIGR_CMR|CPS_1089 [details] [associations]
symbol:CPS_1089 "geranyltranstransferase" species:167879
"Colwellia psychrerythraea 34H" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K00795 RefSeq:YP_267833.1
ProteinModelPortal:Q487D2 STRING:Q487D2 GeneID:3518499
KEGG:cps:CPS_1089 PATRIC:21465449 OMA:KTCTEIC
BioCyc:CPSY167879:GI48-1171-MONOMER Uniprot:Q487D2
Length = 300
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 115/291 (39%), Positives = 170/291 (58%)
Query: 73 EQVNKALD---EAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAA 129
E++N L E + + P K+ +AMRY LL GGKR+RP L + E V D + A
Sbjct: 12 ERINDFLAAKLEGLTINDP-KLIEAMRYGLLIGGKRMRPYLAYITGEAVSADLNDIDAVA 70
Query: 130 CALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIA 189
ALE IH SL+HDDLP +D+D+ RR KP H+ F E+TAILAGDAL +LA + +A +
Sbjct: 71 GALECIHAYSLLHDDLPAMDDDDLRRGKPTCHKAFDEATAILAGDALQTLAFDILANHTF 130
Query: 190 GVSPDRV-----VRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLL 244
++ V+ I ++ A G +G+ G+ +D+A+ GK++SL ELE +H KT LL
Sbjct: 131 SMNQSTAGMPIQVKLIQQLVKASGYQGMCGGQALDLAATGKNISLGELEVLHSLKTGALL 190
Query: 245 EXXXXXXXXXXXXXXIEVERVRN-YARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASG 303
E E + + + YA+ IGL +QV DDI+D+T + EELGK G D+A+
Sbjct: 191 EASVLMPAMCSGQVTREYKIILSEYAQLIGLAYQVQDDIIDLTSTEEELGKPVGSDIAAN 250
Query: 304 KATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K+TYP L+G++ A+ A LL QA++ L+ + + F A +I R +
Sbjct: 251 KSTYPALLGLQGAQDKAENLLQQALQALSRLPYNTQSLADF-ATFIVKRSH 300
>TIGR_CMR|SO_1526 [details] [associations]
symbol:SO_1526 "geranyltranstransferase" species:211586
"Shewanella oneidensis MR-1" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337
OMA:MEFAHAV KO:K00795 RefSeq:NP_717143.1 ProteinModelPortal:Q8EGR8
GeneID:1169335 KEGG:son:SO_1526 PATRIC:23522694
ProtClustDB:CLSK906310 Uniprot:Q8EGR8
Length = 293
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 103/289 (35%), Positives = 155/289 (53%)
Query: 65 EEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW 124
+EY +R +Q+ + P +K AM + L GGKR+RP L + ++ G
Sbjct: 7 KEYQLRVDDQLKQRFSTLEDTAPQLKA--AMTHGALLGGKRIRPFLVYSVGQMFGVPLEK 64
Query: 125 AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV 184
A A+E IH SLIHDDLP +D+D RR +P H F E+TAILAGDAL +LA E V
Sbjct: 65 LDACAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTLAFEIV 124
Query: 185 AVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLL 244
+ G++ ++ + + + A G G+ G+ +D+AS K + LK L +H KT L+
Sbjct: 125 TEAVPGITSEQHIAMVRALAKASGYRGMCGGQAIDLASTDKHIDLKALTQLHNMKTGALI 184
Query: 245 EXXXXXXXXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGK 304
+ + + +A +GL FQV DDILD+ ++EELGK G D S K
Sbjct: 185 SCAVELALIAANAPKDQYQTMMEFAHAVGLAFQVQDDILDIIATTEELGKPQGSDAESNK 244
Query: 305 ATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
+T+P+L+G++ AK A +L+ +A+ LA + F A YI R+
Sbjct: 245 STFPQLLGLQGAKDTATQLIQEALSALAKLPYNSQLIADF-ARYIIERR 292
>UNIPROTKB|P22939 [details] [associations]
symbol:ispA "geranyl diphosphate synthase / farnesyl
diphosphate synthase" species:83333 "Escherichia coli K-12"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0033384 "geranyl
diphosphate biosynthetic process" evidence=IMP] [GO:0004337
"geranyltranstransferase activity" evidence=IEA;IDA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005737 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
EMBL:U82664 eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 EMBL:D00694 PIR:JQ0665 RefSeq:NP_414955.1
RefSeq:YP_488713.1 PDB:1RQI PDB:1RQJ PDBsum:1RQI PDBsum:1RQJ
ProteinModelPortal:P22939 SMR:P22939 DIP:DIP-10044N IntAct:P22939
MINT:MINT-1233182 SWISS-2DPAGE:P22939 PRIDE:P22939
EnsemblBacteria:EBESCT00000002132 EnsemblBacteria:EBESCT00000015988
GeneID:12930843 GeneID:945064 KEGG:ecj:Y75_p0409 KEGG:eco:b0421
PATRIC:32115991 EchoBASE:EB0503 EcoGene:EG10508 KO:K00795
OMA:NITEECI ProtClustDB:PRK10581 BioCyc:EcoCyc:FPPSYN-MONOMER
BioCyc:ECOL316407:JW0411-MONOMER BioCyc:MetaCyc:FPPSYN-MONOMER
BRENDA:2.5.1.1 SABIO-RK:P22939 ChEMBL:CHEMBL1075078
EvolutionaryTrace:P22939 Genevestigator:P22939 Uniprot:P22939
Length = 299
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 114/296 (38%), Positives = 160/296 (54%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F + + +Q N+AL + P + + M+Y L GGKR+RP L A+ + G
Sbjct: 3 FPQQLEACVKQANQALSRFIAPLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVS 62
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
+ A A+E IH SLIHDDLP +D+D+ RR P H FGE+ AILAGDAL +LA
Sbjct: 63 TNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAF 122
Query: 182 EHVA-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKT 240
++ ++ VS + I+E+ SA G+ G+ G+ +D+ +EGK V L LE IH HKT
Sbjct: 123 SILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKT 182
Query: 241 AKLLEXXXXXXXXXXXXXXIEVERVRN-YARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
L+ V + YA IGL FQV DDILDV + LGK G D
Sbjct: 183 GALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGAD 242
Query: 300 LASGKATYPKLMGIENAKSFAGELLG---QAIEELAYFEASKAAPLYFLANYIASR 352
GK+TYP L+G+E A+ A +L+ Q++++LA +A L LA+YI R
Sbjct: 243 QQLGKSTYPALLGLEQARKKARDLIDDARQSLKQLAEQSLDTSA-LEALADYIIQR 297
>TAIR|locus:2121149 [details] [associations]
symbol:GGR "geranylgeranyl reductase" species:3702
"Arabidopsis thaliana" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0004311 "farnesyltranstransferase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00723 GO:GO:0009507 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 EMBL:AL161593 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 EMBL:AL035540
HOGENOM:HOG000009101 KO:K13789 GO:GO:0051501 EMBL:L40577
EMBL:AY057734 EMBL:AF324662 EMBL:AF326906 EMBL:AF339725
EMBL:AF372915 EMBL:AY086829 IPI:IPI00540165 PIR:T05674
RefSeq:NP_195558.1 UniGene:At.20379 ProteinModelPortal:Q39108
SMR:Q39108 IntAct:Q39108 STRING:Q39108 PaxDb:Q39108 PRIDE:Q39108
EnsemblPlants:AT4G38460.1 GeneID:830002 KEGG:ath:AT4G38460
TAIR:At4g38460 InParanoid:Q39108 OMA:SAMRYAV PhylomeDB:Q39108
ProtClustDB:CLSN2685424 Genevestigator:Q39108 GermOnline:AT4G38460
Uniprot:Q39108
Length = 326
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 109/285 (38%), Positives = 155/285 (54%)
Query: 19 PINDFKKSPYRAPIFRFKLFSKKIKARHAQNSVFESTDIPLPTFPFEEYMIRKAEQVNKA 78
P++ F P + KL I R + +S S + L T Y ++N+
Sbjct: 9 PLSSFCSLPEKPHTLPMKLSPAAI--RSSSSSAPGSLNFDLRT-----YWTTLITEINQK 61
Query: 79 LDEAVVLQPPVKIHKAMRYSLLA-GGKRVRPLLCIASCELVGGDESWAMPAACALEMIHT 137
LDEA+ ++ P I++AMRYS+LA G KR P++C+A+CEL GGD A P ACALEM+H
Sbjct: 62 LDEAIPVKHPAGIYEAMRYSVLAQGAKRAPPVMCVAACELFGGDRLAAFPTACALEMVHA 121
Query: 138 MSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVV 197
SLIHDDLP +D+D RR KP++H V+G AILAGDAL LA +H+ ++ PD V
Sbjct: 122 ASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPLAFQHI---VSHTPPDLVP 178
Query: 198 RA-----IAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEXXXXXXX 252
RA I E+ +G G+ AG++VD+ EG L ++ K + E
Sbjct: 179 RATILRLITEIARTVGSTGMAAGQYVDL--EGGPFPLS---FVQEKKFGAMGECSAVCGG 233
Query: 253 XXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
E++ +R Y R +G+L+QVVDDI + K S + G G
Sbjct: 234 LLGGATEDELQSLRRYGRAVGMLYQVVDDITEDKKKSYDGGAEKG 278
>UNIPROTKB|Q9KTL2 [details] [associations]
symbol:VC_0890 "Geranyltranstransferase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004337 KO:K00795 OMA:DLISEHK PIR:A82267
RefSeq:NP_230537.1 PDB:3P8R PDBsum:3P8R ProteinModelPortal:Q9KTL2
SMR:Q9KTL2 DNASU:2614119 GeneID:2614119 KEGG:vch:VC0890
PATRIC:20080878 ProtClustDB:CLSK874144 Uniprot:Q9KTL2
Length = 294
Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
Identities = 108/290 (37%), Positives = 159/290 (54%)
Query: 67 YMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAM 126
Y R +Q+++ L+ + Q + + +AMRY LL GGKR RP L + +++G + S
Sbjct: 8 YQQRNNQQLDQWLNR-IPFQT-LPLIEAMRYGLLLGGKRARPYLVYITGQMLGCELSDLD 65
Query: 127 PAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAV 186
A A+E IH SLIHDDLP +D+DE RR KP H F E+TAIL GDAL +LA +A
Sbjct: 66 TPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTILAE 125
Query: 187 -NIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLE 245
+++ + V + + A G +G+ G+ +D+A+E + +SL+ELE IH +KT L+
Sbjct: 126 GDLSAAGETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKTGALMR 185
Query: 246 -XXXXXXXXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGK 304
+ + YA +GL FQV DDILD+ +E LGK G D K
Sbjct: 186 CAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNK 245
Query: 305 ATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+TYP L+G+E A+ A LL +A+ L + L A Y+ R+N
Sbjct: 246 STYPALLGLEGAQQKAHTLLQEALLALEAIPYN-TEHLEEFARYVVERKN 294
>TIGR_CMR|VC_0890 [details] [associations]
symbol:VC_0890 "geranyltranstransferase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004337 KO:K00795 OMA:DLISEHK PIR:A82267
RefSeq:NP_230537.1 PDB:3P8R PDBsum:3P8R ProteinModelPortal:Q9KTL2
SMR:Q9KTL2 DNASU:2614119 GeneID:2614119 KEGG:vch:VC0890
PATRIC:20080878 ProtClustDB:CLSK874144 Uniprot:Q9KTL2
Length = 294
Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
Identities = 108/290 (37%), Positives = 159/290 (54%)
Query: 67 YMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAM 126
Y R +Q+++ L+ + Q + + +AMRY LL GGKR RP L + +++G + S
Sbjct: 8 YQQRNNQQLDQWLNR-IPFQT-LPLIEAMRYGLLLGGKRARPYLVYITGQMLGCELSDLD 65
Query: 127 PAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAV 186
A A+E IH SLIHDDLP +D+DE RR KP H F E+TAIL GDAL +LA +A
Sbjct: 66 TPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTILAE 125
Query: 187 -NIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLE 245
+++ + V + + A G +G+ G+ +D+A+E + +SL+ELE IH +KT L+
Sbjct: 126 GDLSAAGETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKTGALMR 185
Query: 246 -XXXXXXXXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGK 304
+ + YA +GL FQV DDILD+ +E LGK G D K
Sbjct: 186 CAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNK 245
Query: 305 ATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+TYP L+G+E A+ A LL +A+ L + L A Y+ R+N
Sbjct: 246 STYPALLGLEGAQQKAHTLLQEALLALEAIPYN-TEHLEEFARYVVERKN 294
>UNIPROTKB|Q5LX41 [details] [associations]
symbol:ispA "Farnesyl diphosphate synthase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K00795
RefSeq:YP_165512.1 ProteinModelPortal:Q5LX41 GeneID:3196371
KEGG:sil:SPO0248 PATRIC:23373747 OMA:ANTETHG
ProtClustDB:CLSK2767208 Uniprot:Q5LX41
Length = 288
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 103/293 (35%), Positives = 160/293 (54%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
F E + + A + ++ D + P+ I +AM ++ GGKR+R L + S L DE+
Sbjct: 2 FHERLAQDAALIQRSFDTVLGALEPLDITRAMAWTT-EGGKRLRGFLVLESARLHDVDEA 60
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
A+ A A+E +H SL+HDDLP +D+D+ RR +P +H + E TA+LAGDAL SLA E
Sbjct: 61 RAIWPATAIEALHAYSLVHDDLPCMDDDDLRRGRPTAHVKWDEGTAVLAGDALHSLAFEL 120
Query: 184 VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG--KDVSLKELEYIHVHKTA 241
G + R A+ + A G G+V G+ +DIA+E K ++L ++ + KT
Sbjct: 121 CTRPEVGTAETRATLALT-LAQAAGARGMVLGQALDIAAETAPKPLTLDQITRLQAGKTG 179
Query: 242 KLLEXXXXXXXXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
L+E + + +R YAR +GL FQ+ DDILDV +E+ GK KD
Sbjct: 180 ALIEWAAAAGAVLAGA---DPDPLRQYARALGLAFQIADDILDVEGDAEKAGKRLQKDAG 236
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+GKAT+ L+G++ AK+ A +L+ Q L + +A L A ++ +R N
Sbjct: 237 AGKATFVSLLGLDAAKARARDLVDQGCAALDGY-GERAGTLKEAARFVIARDN 288
>TIGR_CMR|SPO_0248 [details] [associations]
symbol:SPO_0248 "farnesyl diphosphate synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0045337
"farnesyl diphosphate biosynthetic process" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K00795
RefSeq:YP_165512.1 ProteinModelPortal:Q5LX41 GeneID:3196371
KEGG:sil:SPO0248 PATRIC:23373747 OMA:ANTETHG
ProtClustDB:CLSK2767208 Uniprot:Q5LX41
Length = 288
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 103/293 (35%), Positives = 160/293 (54%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
F E + + A + ++ D + P+ I +AM ++ GGKR+R L + S L DE+
Sbjct: 2 FHERLAQDAALIQRSFDTVLGALEPLDITRAMAWTT-EGGKRLRGFLVLESARLHDVDEA 60
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
A+ A A+E +H SL+HDDLP +D+D+ RR +P +H + E TA+LAGDAL SLA E
Sbjct: 61 RAIWPATAIEALHAYSLVHDDLPCMDDDDLRRGRPTAHVKWDEGTAVLAGDALHSLAFEL 120
Query: 184 VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG--KDVSLKELEYIHVHKTA 241
G + R A+ + A G G+V G+ +DIA+E K ++L ++ + KT
Sbjct: 121 CTRPEVGTAETRATLALT-LAQAAGARGMVLGQALDIAAETAPKPLTLDQITRLQAGKTG 179
Query: 242 KLLEXXXXXXXXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
L+E + + +R YAR +GL FQ+ DDILDV +E+ GK KD
Sbjct: 180 ALIEWAAAAGAVLAGA---DPDPLRQYARALGLAFQIADDILDVEGDAEKAGKRLQKDAG 236
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+GKAT+ L+G++ AK+ A +L+ Q L + +A L A ++ +R N
Sbjct: 237 AGKATFVSLLGLDAAKARARDLVDQGCAALDGY-GERAGTLKEAARFVIARDN 288
>UNIPROTKB|Q0C153 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:228405
"Hyphomonas neptunium ATCC 15444" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000158
GenomeReviews:CP000158_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K00795 RefSeq:YP_760540.1
ProteinModelPortal:Q0C153 STRING:Q0C153 GeneID:4289927
KEGG:hne:HNE_1839 PATRIC:32216509 OMA:ICKDISK
ProtClustDB:CLSK2780959 BioCyc:HNEP228405:GI69-1865-MONOMER
Uniprot:Q0C153
Length = 295
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 99/291 (34%), Positives = 149/291 (51%)
Query: 64 FEEYMIRKAEQVNKALDEAV--VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
FE+ + A++V ALD+ + P + +AMR++ LA GKR+RP + + + G
Sbjct: 4 FEQRLTEVADKVTVALDQLIPPASGPEANLMRAMRHAALANGKRMRPFFVLETGAMFGAS 63
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
E + A ALE IH SL+HDDLP +D+D+ RR +P H+ F E+TA+LAGDALL+LA
Sbjct: 64 EKSLLRTAAALECIHCYSLVHDDLPCMDDDDFRRGQPTVHKAFDEATAVLAGDALLTLAF 123
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
+ +A + P V I + A G G+V G+ +D+ E L + + KT
Sbjct: 124 KILASSETHDDPAVRVLLIERLADAAGARGMVGGQMIDMLEEESPRDLNTITRMQRLKTG 183
Query: 242 KLLEXXXXXXXXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
L+ E + +A +GL +Q+ DDILD +GK KD
Sbjct: 184 ALISYALEAGGIIGHAREAERNALAGFANDLGLAYQIADDILDAEGDESIVGKAVSKDKD 243
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
+GKA + L+G++ A+ L QA E LA F KA L +Y+ +R
Sbjct: 244 AGKANFVTLLGVDGARQRVRLLAAQAKEHLAIFR-DKAHILLHSVDYVLNR 293
>TIGR_CMR|CJE_1816 [details] [associations]
symbol:CJE_1816 "geranyltranstransferase" species:195099
"Campylobacter jejuni RM1221" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0008299 "isoprenoid biosynthetic
process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000025
GenomeReviews:CP000025_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K00795 OMA:DLISEHK RefSeq:YP_179786.1 PDB:3NPK
PDBsum:3NPK ProteinModelPortal:Q5HSE9 STRING:Q5HSE9 GeneID:3232443
KEGG:cjr:CJE1816 PATRIC:20045454 ProtClustDB:CLSK872468
BioCyc:CJEJ195099:GJC0-1850-MONOMER Uniprot:Q5HSE9
Length = 281
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 84/241 (34%), Positives = 131/241 (54%)
Query: 92 HKAMRYSLLAGGKRVRPLLCIASCELVGGDE-SWAMPAACALEMIHTMSLIHDDLPFLDN 150
++A+ L AGGK R L ++ + + + A+ A ALE IHT SLIHDDLP +DN
Sbjct: 26 NEALALMLKAGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDN 85
Query: 151 DERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVE 210
+ RR P H+ + E+TAIL GDAL + A + ++ A + + ++ I + G+
Sbjct: 86 ADFRRGIPTLHKSYDETTAILVGDALNTEAF--LVLSHAHLKDEIKIKLIKTLAFNAGLN 143
Query: 211 GLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEXXXXXXXXXXXXXXIEVERVRNYAR 270
G+V G+ +D E K +SL ELE++H HKTA+L+ E ++
Sbjct: 144 GMVIGQAIDCFFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGL 203
Query: 271 CIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEE 330
+GL+FQ+ DDI+DVT S E+ GK D+ K ++ L+G+E A LL + ++
Sbjct: 204 KLGLIFQINDDIIDVTTSQEQSGKPTNNDIH--KNSFVNLLGLEQAIKTKENLLNECEQD 261
Query: 331 L 331
L
Sbjct: 262 L 262
>UNIPROTKB|Q83C74 [details] [associations]
symbol:CBU_1255 "Dimethylallyltransferase" species:227377
"Coxiella burnetii RSA 493" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
KO:K00795 RefSeq:NP_820249.1 ProteinModelPortal:Q83C74
GeneID:1209160 KEGG:cbu:CBU_1255 PATRIC:17931243 OMA:MACAVEC
ProtClustDB:CLSK914646 BioCyc:CBUR227377:GJ7S-1240-MONOMER
Uniprot:Q83C74
Length = 267
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 76/223 (34%), Positives = 126/223 (56%)
Query: 73 EQVNKALDEAV--VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAAC 130
E++N L + + Q P ++H+AM Y++++GGKR+RPL A+ D + AAC
Sbjct: 9 ERINHKLGSILPDIRQTPQRLHEAMTYAVMSGGKRIRPLFTYATGFSFEVDPAQIDNAAC 68
Query: 131 ALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAG 190
A+E++H SL+HDDLP +D+D+ RR KP+ H+ F E+TAIL GDAL LA E +A
Sbjct: 69 AIELMHCYSLVHDDLPAMDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFEVLA----- 123
Query: 191 VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEXXXXX 250
D+ +R I + +A G G+ G+ +D+ + K+ + +++E +H KT L
Sbjct: 124 --RDKNIRLINVLANACGSLGMAGGQQLDLEFKNKEATPEQIEIVHRLKTGALFSTAIEL 181
Query: 251 XXXXXXXXXIE-VERVRNYARCIGLLFQVVDDILDVTKSSEEL 292
+ ++++R +GL+FQ DD+ D T E++
Sbjct: 182 GALAAGCLDEKRLQKLRKLGATVGLIFQWQDDLADQTVEDEKI 224
>TIGR_CMR|CBU_1255 [details] [associations]
symbol:CBU_1255 "geranyltranstransferase, putative"
species:227377 "Coxiella burnetii RSA 493" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0045337
"farnesyl diphosphate biosynthetic process" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016828
GenomeReviews:AE016828_GR InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337
GO:GO:0045337 KO:K00795 RefSeq:NP_820249.1
ProteinModelPortal:Q83C74 GeneID:1209160 KEGG:cbu:CBU_1255
PATRIC:17931243 OMA:MACAVEC ProtClustDB:CLSK914646
BioCyc:CBUR227377:GJ7S-1240-MONOMER Uniprot:Q83C74
Length = 267
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 76/223 (34%), Positives = 126/223 (56%)
Query: 73 EQVNKALDEAV--VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAAC 130
E++N L + + Q P ++H+AM Y++++GGKR+RPL A+ D + AAC
Sbjct: 9 ERINHKLGSILPDIRQTPQRLHEAMTYAVMSGGKRIRPLFTYATGFSFEVDPAQIDNAAC 68
Query: 131 ALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAG 190
A+E++H SL+HDDLP +D+D+ RR KP+ H+ F E+TAIL GDAL LA E +A
Sbjct: 69 AIELMHCYSLVHDDLPAMDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFEVLA----- 123
Query: 191 VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEXXXXX 250
D+ +R I + +A G G+ G+ +D+ + K+ + +++E +H KT L
Sbjct: 124 --RDKNIRLINVLANACGSLGMAGGQQLDLEFKNKEATPEQIEIVHRLKTGALFSTAIEL 181
Query: 251 XXXXXXXXXIE-VERVRNYARCIGLLFQVVDDILDVTKSSEEL 292
+ ++++R +GL+FQ DD+ D T E++
Sbjct: 182 GALAAGCLDEKRLQKLRKLGATVGLIFQWQDDLADQTVEDEKI 224
>TIGR_CMR|GSU_1317 [details] [associations]
symbol:GSU_1317 "octaprenyl-diphosphate synthase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102 RefSeq:NP_952370.1
ProteinModelPortal:Q74DJ9 GeneID:2686096 KEGG:gsu:GSU1317
PATRIC:22025411 OMA:FNKPVLE ProtClustDB:CLSK828295
BioCyc:GSUL243231:GH27-1296-MONOMER Uniprot:Q74DJ9
Length = 322
Score = 291 (107.5 bits), Expect = 6.8e-30, Sum P(2) = 6.8e-30
Identities = 80/260 (30%), Positives = 126/260 (48%)
Query: 74 QVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALE 133
Q K L+ V L I K Y L +GGKR+RP+L + S +L G +P A +E
Sbjct: 18 QFRKDLESDVYL-----IRKVGEYVLASGGKRIRPMLLLLSAKLCGYQGDRHVPLASVIE 72
Query: 134 MIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSP 193
IHT +L+HDD+ +DN RR +++EV+G ++L GD L S + + V +
Sbjct: 73 FIHTATLLHDDV--VDNATLRRGNASANEVWGNEASVLVGDFLFSKSFS-LMVEAGDL-- 127
Query: 194 DRVVRAIAEMCSAMGVEGLVA-GEFVDIASEGKDVSLKELEYIHV--HKTAKLLEXXXXX 250
R+++ I+ G ++A GE + + D+ + + YI V KTA LL
Sbjct: 128 -RILKVIS------GATTIIAEGEVLQLLCTS-DLEMTQERYIEVVKSKTAVLLSAACEA 179
Query: 251 XXXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKL 310
+ E +R++ +G+ FQ++DD LD T S E+ GK G DL GK T P +
Sbjct: 180 GAILGTSSAEQQEALRDFGMDLGIAFQLMDDTLDYTASEEQFGKEIGHDLEEGKITLPLI 239
Query: 311 MGIENAKSFAGELLGQAIEE 330
+ E + +E+
Sbjct: 240 HTLMKCSDEERETIAAVVEK 259
Score = 55 (24.4 bits), Expect = 6.8e-30, Sum P(2) = 6.8e-30
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 309 KLMGIENAKSFAGELLGQAIEEL-AYFEASKAAPLYFLANYIASRQ 353
K GIE S A E + + L A+ ++ + A L LA+Y+ +R+
Sbjct: 276 KYGGIEYTVSVANEYIARCKAHLGAFVDSQEKAALIELADYVVNRK 321
>UNIPROTKB|Q3IPL1 [details] [associations]
symbol:idsA3 "Geranylfarnesyl diphosphate synthase"
species:348780 "Natronomonas pharaonis DSM 2160" [GO:0004659
"prenyltransferase activity" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005737
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004659 HOGENOM:HOG000009101 KO:K13787 GO:GO:0044687
EMBL:CR936257 RefSeq:YP_327492.1 ProteinModelPortal:Q3IPL1
STRING:Q3IPL1 PRIDE:Q3IPL1 GeneID:3702862 GenomeReviews:CR936257_GR
KEGG:nph:NP3696A OMA:DIMDNDD ProtClustDB:CLSK511327
BioCyc:NPHA348780:GJX0-1875-MONOMER Uniprot:Q3IPL1
Length = 341
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 90/260 (34%), Positives = 134/260 (51%)
Query: 65 EEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG----- 119
E + + E VN+A+ E + +Q P +++ A RY L AGGKR+RP + + + E +
Sbjct: 8 ESAIAERREIVNEAVSEQLPVQKPERLYSASRYLLDAGGKRLRPTILLLAAESLADVEPL 67
Query: 120 -----------GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGEST 168
GDE + AA ++E+I + +LIHDD+ +D+D+ RR PA H + T
Sbjct: 68 SADYRQFPSLPGDEVDVLSAAVSIEVIQSFTLIHDDI--MDDDDLRRGVPAVHREYDLET 125
Query: 169 AILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DV 227
AILAGD L S A E++ G +R V A+ E+ + E + G+ +D+ E + DV
Sbjct: 126 AILAGDTLYSKAFEYMLDT--GAPAERSVEALDELATTC-TE-ICEGQALDVDFENRSDV 181
Query: 228 SLKE-LEYIHVHKTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVT 286
+ +E LE + KTA L VE + Y IG FQ+ DD+LD+T
Sbjct: 182 TTEEYLEMVEF-KTAVLYAAAASIPAILLGSDDETVEALHGYGLDIGRAFQIQDDLLDLT 240
Query: 287 KSSEELGKTAGKDLASGKAT 306
S+ELGK G DL K T
Sbjct: 241 APSDELGKQRGSDLVENKRT 260
>TIGR_CMR|ECH_0455 [details] [associations]
symbol:ECH_0455 "putative geranyltranstransferase"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0016740 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 KO:K00795 OMA:ICKDISK RefSeq:YP_507273.1
ProteinModelPortal:Q2GH10 STRING:Q2GH10 GeneID:3926960
KEGG:ech:ECH_0455 PATRIC:20576384 ProtClustDB:CLSK749162
BioCyc:ECHA205920:GJNR-456-MONOMER Uniprot:Q2GH10
Length = 267
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 72/198 (36%), Positives = 109/198 (55%)
Query: 94 AMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDER 153
+MRYS+ A GK +RP L AS ++ + +P + A+E+IH SLIHDDLP +DN+
Sbjct: 27 SMRYSMFAPGKHIRPFLVNASAQIFNVNVDRILPVSAAVEIIHVYSLIHDDLPGIDNENI 86
Query: 154 RRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLV 213
RR + +SH+ F E+ AIL GDALL+LA E ++ SP I + A+G +G++
Sbjct: 87 RRGQASSHKKFNEAIAILTGDALLTLAFE--ILSTIDESPFIRCCMIKALAKALGYQGMI 144
Query: 214 AGEFVDIASEGKDVSLKELEYIHVHKTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCIG 273
G+ +D + KD + +++ IHV KTA+ IE+ + NY +G
Sbjct: 145 QGQILDTETIAKDTN--DIQAIHVLKTAQFFSVACELGGILGNASNIELNALANYGLNLG 202
Query: 274 LLFQVVDDILDVTKSSEE 291
FQV DDI D + +
Sbjct: 203 HAFQVKDDIADANQDKSK 220
>UNIPROTKB|P0A5H8 [details] [associations]
symbol:MT3506 "(2E,6E)-farnesyl diphosphate synthase"
species:1773 "Mycobacterium tuberculosis" [GO:0000287 "magnesium
ion binding" evidence=IDA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0005506
"iron ion binding" evidence=IDA] [GO:0030145 "manganese ion
binding" evidence=IDA] [GO:0033384 "geranyl diphosphate
biosynthetic process" evidence=IDA] [GO:0033386 "geranylgeranyl
diphosphate biosynthetic process" evidence=IDA] [GO:0040007
"growth" evidence=IMP] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00766 GO:GO:0005737
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000287 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0005506 GO:GO:0016126
GO:GO:0030145 EMBL:BX842582 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 PIR:C70735 RefSeq:NP_338029.1
RefSeq:YP_006516883.1 RefSeq:YP_177970.1 ProteinModelPortal:P0A5H8
SMR:P0A5H8 EnsemblBacteria:EBMYCT00000003545
EnsemblBacteria:EBMYCT00000069473 GeneID:13317001 GeneID:887919
GeneID:926589 KEGG:mtc:MT3506 KEGG:mtu:Rv3398c KEGG:mtv:RVBD_3398c
PATRIC:18129451 TubercuList:Rv3398c HOGENOM:HOG000009101 KO:K13787
OMA:RMAPLES ProtClustDB:CLSK799990 BioCyc:MetaCyc:MONOMER-15280
GO:GO:0004161 GO:GO:0004337 GO:GO:0045337 GO:GO:0033384
GO:GO:0033386 Uniprot:P0A5H8
Length = 359
Score = 296 (109.3 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 81/236 (34%), Positives = 115/236 (48%)
Query: 103 GKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHE 162
GK +RP L + E G D A+P A ++E++H SL+HDDL +D DE RR +P
Sbjct: 72 GKAIRPALVFVAAEAAGADPHSAIPGAVSVELVHNFSLVHDDL--MDRDEHRRHRPTVWA 129
Query: 163 VFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIAS 222
++G++ A+LAGDA+LSLA E V ++ +RAI+E L+ G+ D A
Sbjct: 130 LWGDAMALLAGDAMLSLAHE-VLLDCDSPHVGAALRAISE-----ATRELIRGQAADTAF 183
Query: 223 EGK-DVSLKELEYIHVHKTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCIGLLFQVVDD 281
E + DV+L E + KTA L+ E + Y R IGL FQ+VDD
Sbjct: 184 ESRTDVALDECLKMAEGKTAALMAASAEVGALLAGAPRSVREALVAYGRHIGLAFQLVDD 243
Query: 282 ILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEAS 337
+L + E GK DL S K T P + + S L ++E AS
Sbjct: 244 LLGIWGRPEITGKPVYSDLRSRKKTLPVTWTVAHGGSAGRRLAAWLVDETGSQTAS 299
Score = 37 (18.1 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 339 AAPLYFLANYIASRQ 353
AA L LA+YI RQ
Sbjct: 344 AAELQDLAHYIVDRQ 358
>TIGR_CMR|ECH_0088 [details] [associations]
symbol:ECH_0088 "octaprenyl-diphosphate synthase"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0016740 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 OMA:QQFPELH
KO:K02523 HOGENOM:HOG000009102 RefSeq:YP_506918.1
ProteinModelPortal:Q2GI15 STRING:Q2GI15 GeneID:3927493
KEGG:ech:ECH_0088 PATRIC:20575731 ProtClustDB:CLSK749549
BioCyc:ECHA205920:GJNR-88-MONOMER Uniprot:Q2GI15
Length = 325
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 75/266 (28%), Positives = 138/266 (51%)
Query: 61 TFPFEEYMIRKAEQVNKALD--EAVVLQPPVK----IHKAMRYSLLAGGKRVRPLLCIAS 114
T F ++ V + LD E+++L K I + +++ + +GGKR+RP++
Sbjct: 2 TNDFSNTFLQLKSLVQQDLDSMESLILHQNNKHITLITEIVQHLIKSGGKRIRPIIFFII 61
Query: 115 CELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGD 174
C+++ + +P A A+E+IH +L+HDD+ +D E RR + S+ ++G +IL GD
Sbjct: 62 CKMLNCNNENKVPIAAAIELIHNATLLHDDV--IDESELRRGEKTSNVIWGNKASILVGD 119
Query: 175 ALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEY 234
LL+++ + + + ++ + +I S + ++ GE + S ++++ + +Y
Sbjct: 120 FLLAISFQWL-IKCKNLN----ILSILSQAS----KDVIVGEVQQMISS-HNINISKEKY 169
Query: 235 IHV--HKTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSEEL 292
I + KTA L E E ++N+ G+ FQ++DDILD T S E+
Sbjct: 170 IEIISAKTAALFSATCESAANLAQTSNEEKEALKNFGNNFGISFQIMDDILDYTASGEQF 229
Query: 293 GKTAGKDLASGKATYPKLMGIENAKS 318
GK G DL +GK T P ++ +NA S
Sbjct: 230 GKKLGNDLLTGKTTLPVIIAYQNATS 255
>TAIR|locus:2202940 [details] [associations]
symbol:SPS1 "solanesyl diphosphate synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0015979 "photosynthesis" evidence=IEA]
[GO:0050347 "trans-octaprenyltranstransferase activity"
evidence=IGI;IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0006744 "ubiquinone biosynthetic process" evidence=IGI;RCA]
InterPro:IPR000092 InterPro:IPR014120 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 GO:GO:0005783 EMBL:CP002684 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006744
GO:GO:0015979 EMBL:AC007260 eggNOG:COG0142 HOGENOM:HOG000009104
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
BRENDA:2.5.1.11 EMBL:AB071514 EMBL:AB188497 EMBL:BT025550
EMBL:AK229738 IPI:IPI00525401 IPI:IPI00542022 IPI:IPI00846461
PIR:F96813 RefSeq:NP_001077840.1 RefSeq:NP_177972.2
UniGene:At.34283 ProteinModelPortal:Q8S948 SMR:Q8S948 STRING:Q8S948
PRIDE:Q8S948 EnsemblPlants:AT1G78510.1 GeneID:844187
KEGG:ath:AT1G78510 TAIR:At1g78510 InParanoid:Q8S948 KO:K05356
OMA:EFIVERK ProtClustDB:PLN02857 BioCyc:ARA:AT1G78510-MONOMER
BioCyc:MetaCyc:AT1G78510-MONOMER Genevestigator:Q8S948
GO:GO:0052924 PANTHER:PTHR12001:SF18 TIGRFAMs:TIGR02749
Uniprot:Q8S948
Length = 406
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 91/265 (34%), Positives = 134/265 (50%)
Query: 58 PLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRP----LLCIA 113
P+ E + + +N L V + PV I A + AGGKR+RP L+ A
Sbjct: 81 PISLVTLFELVAVDLQTLNDNLLSIVGAENPVLISAAEQI-FGAGGKRMRPGLVFLVSHA 139
Query: 114 SCELVGGDESWAMPAACA--LEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAIL 171
+ EL G E A +EMIHT SLIHDD+ LD + RR K HE+FG A+L
Sbjct: 140 TAELAGLKELTTEHRRLAEIIEMIHTASLIHDDV--LDESDMRRGKETVHELFGTRVAVL 197
Query: 172 AGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKE 231
AGD + + A ++A N+ + V++ I+++ ++ +GE + AS D K
Sbjct: 198 AGDFMFAQASWYLA-NLENLE---VIKLISQV-----IKDFASGE-IKQASSLFDCDTKL 247
Query: 232 LEYI--HVHKTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSS 289
EY+ +KTA L+ E++ + + +GL FQ+VDDILD T+S+
Sbjct: 248 DEYLLKSFYKTASLVAASTKGAAIFSRVEPDVTEQMYEFGKNLGLSFQIVDDILDFTQST 307
Query: 290 EELGKTAGKDLASGKATYPKLMGIE 314
E+LGK AG DLA G T P + +E
Sbjct: 308 EQLGKPAGSDLAKGNLTAPVIFALE 332
>TAIR|locus:2020362 [details] [associations]
symbol:SPS2 "solanesyl diphosphate synthase 2"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0015979 "photosynthesis" evidence=IEA]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=IGI;RCA] [GO:0009536 "plastid"
evidence=IDA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IGI] [GO:0009570 "chloroplast stroma"
evidence=IDA] InterPro:IPR000092 InterPro:IPR014120 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009570 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006744
GO:GO:0015979 EMBL:AC007651 eggNOG:COG0142 HOGENOM:HOG000009104
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
OMA:KLYRFGY KO:K05356 ProtClustDB:PLN02857 GO:GO:0052924
PANTHER:PTHR12001:SF18 TIGRFAMs:TIGR02749 EMBL:AB104727
EMBL:AB188498 EMBL:BT028962 EMBL:BT004246 IPI:IPI00518205
PIR:C86306 RefSeq:NP_173148.2 UniGene:At.43587
ProteinModelPortal:Q76FS5 SMR:Q76FS5 STRING:Q76FS5 PaxDb:Q76FS5
PRIDE:Q76FS5 EnsemblPlants:AT1G17050.1 GeneID:838275
KEGG:ath:AT1G17050 TAIR:At1g17050 InParanoid:Q76FS5
PhylomeDB:Q76FS5 BioCyc:ARA:AT1G17050-MONOMER
BioCyc:MetaCyc:AT1G17050-MONOMER Genevestigator:Q76FS5
Uniprot:Q76FS5
Length = 417
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 86/250 (34%), Positives = 128/250 (51%)
Query: 73 EQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRP----LLCIASCELVGGDESWAMPA 128
+++N L V + PV I A + AGGKR+RP L+ A+ EL G E
Sbjct: 107 QRLNDNLLSIVGAENPVLISAAEQI-FSAGGKRMRPGLVFLVSRATAELAGLKELTVEHR 165
Query: 129 ACA--LEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAV 186
+EMIHT SLIHDD+ LD + RR + HE+FG A+LAGD + + A ++A
Sbjct: 166 RLGEIIEMIHTASLIHDDV--LDESDMRRGRETVHELFGTRVAVLAGDFMFAQASWYLA- 222
Query: 187 NIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKTAKLLE 245
N+ + V++ I+++ ++ +GE +S DV L + +KTA L+
Sbjct: 223 NLENLE---VIKLISQV-----IKDFASGEIKQASSLFDCDVKLDDYMLKSYYKTASLVA 274
Query: 246 XXXXXXXXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKA 305
E++ + + +GL FQVVDDILD T+S+E+LGK A DLA G
Sbjct: 275 ASTKGAAIFSKVESKVAEQMYQFGKNLGLSFQVVDDILDFTQSTEQLGKPAANDLAKGNI 334
Query: 306 TYPKLMGIEN 315
T P + +EN
Sbjct: 335 TAPVIFALEN 344
>UNIPROTKB|Q9KUT1 [details] [associations]
symbol:VC_0434 "Octaprenyl-diphosphate synthase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006744 "ubiquinone biosynthetic process" evidence=ISS]
[GO:0009234 "menaquinone biosynthetic process" evidence=ISS]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006744 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765 OMA:QQFPELH
KO:K02523 GO:GO:0009234 PIR:A82322 RefSeq:NP_230088.1
ProteinModelPortal:Q9KUT1 DNASU:2615695 GeneID:2615695
KEGG:vch:VC0434 PATRIC:20079947 ProtClustDB:CLSK873977
Uniprot:Q9KUT1
Length = 348
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 83/295 (28%), Positives = 146/295 (49%)
Query: 39 SKKIKARHAQNSVFESTDIPLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYS 98
S+++ A HA S + D M + E ++ L+ V L I++ Y
Sbjct: 10 SRRLNALHALISAGFTMDFKAIQALTANDMAKVNETIHAQLNSDVSL-----INQLGFYI 64
Query: 99 LLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKP 158
+ GGKR+RPLL + S + +G S AA +E IHT +L+HDD+ +D + RR K
Sbjct: 65 ISGGGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKA 122
Query: 159 ASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFV 218
++ FG + ++L GD + + + + + + + ++++ +++ A+ V + GE
Sbjct: 123 TANAAFGNAASVLVGDFIYTRSFQ-MMTELGSM---KILKLMSD---AVNV--IAEGEVQ 173
Query: 219 DIASEGKDVSLKELEYIHV--HKTAKLLEXXXXXXXXXXXXXXIEVE-RVRNYARCIGLL 275
+ + D E Y+ V KTA+L E EVE ++NY + +G
Sbjct: 174 QLMN-CNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASP-EVELAMQNYGKYLGTA 231
Query: 276 FQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEE 330
FQ++DD++D T +E+GK G DLA GK T P L +++ ++ +AIE+
Sbjct: 232 FQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYAMQHGNPEQAAMIREAIEK 286
>TIGR_CMR|VC_0434 [details] [associations]
symbol:VC_0434 "octaprenyl-diphosphate synthase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006744 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765 OMA:QQFPELH
KO:K02523 GO:GO:0009234 PIR:A82322 RefSeq:NP_230088.1
ProteinModelPortal:Q9KUT1 DNASU:2615695 GeneID:2615695
KEGG:vch:VC0434 PATRIC:20079947 ProtClustDB:CLSK873977
Uniprot:Q9KUT1
Length = 348
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 83/295 (28%), Positives = 146/295 (49%)
Query: 39 SKKIKARHAQNSVFESTDIPLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYS 98
S+++ A HA S + D M + E ++ L+ V L I++ Y
Sbjct: 10 SRRLNALHALISAGFTMDFKAIQALTANDMAKVNETIHAQLNSDVSL-----INQLGFYI 64
Query: 99 LLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKP 158
+ GGKR+RPLL + S + +G S AA +E IHT +L+HDD+ +D + RR K
Sbjct: 65 ISGGGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKA 122
Query: 159 ASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFV 218
++ FG + ++L GD + + + + + + + ++++ +++ A+ V + GE
Sbjct: 123 TANAAFGNAASVLVGDFIYTRSFQ-MMTELGSM---KILKLMSD---AVNV--IAEGEVQ 173
Query: 219 DIASEGKDVSLKELEYIHV--HKTAKLLEXXXXXXXXXXXXXXIEVE-RVRNYARCIGLL 275
+ + D E Y+ V KTA+L E EVE ++NY + +G
Sbjct: 174 QLMN-CNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASP-EVELAMQNYGKYLGTA 231
Query: 276 FQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEE 330
FQ++DD++D T +E+GK G DLA GK T P L +++ ++ +AIE+
Sbjct: 232 FQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYAMQHGNPEQAAMIREAIEK 286
>UNIPROTKB|O66129 [details] [associations]
symbol:hexs-b "Hexaprenyl-diphosphate synthase large
subunit ((2E,6E)-farnesyl-diphosphate specific)" species:1270
"Micrococcus luteus" [GO:0000287 "magnesium ion binding"
evidence=IDA] [GO:0016765 "transferase activity, transferring alkyl
or aryl (other than methyl) groups" evidence=IDA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
GO:GO:0000287 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765
GO:GO:0009234 EMBL:AB003188 PDB:3AQB PDB:3AQC PDBsum:3AQB
PDBsum:3AQC GO:GO:0052923 ProteinModelPortal:O66129
BioCyc:MetaCyc:MONOMER-13829 ChEMBL:CHEMBL3128
EvolutionaryTrace:O66129 Uniprot:O66129
Length = 325
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 81/260 (31%), Positives = 121/260 (46%)
Query: 74 QVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALE 133
+V K L E + I+KA + L +GGKRVRP+ + S L + + A +LE
Sbjct: 16 EVEKRLYECIQSDSET-INKAAHHILSSGGKRVRPMFVLLSGFLNDTQKDDLIRTAVSLE 74
Query: 134 MIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSP 193
++H SL+HDD ++DN + RR + H F + TAI G LL+ AL+++A
Sbjct: 75 LVHMASLVHDD--YIDNSDMRRGNTSVHIAFDKDTAIRTGHFLLARALQNIATINNSKFH 132
Query: 194 DRVVRAIAEMCSAMGVEGLVAGEFVDIASE-GKDVSLKE-LEYIHVHKTAKLLEXXXXXX 251
+ I E+C GEF +A VS L I+ KTA L+E
Sbjct: 133 QIFSKTILEVCF---------GEFDQMADRFNYPVSFTAYLRRIN-RKTAILIEASCHLG 182
Query: 252 XXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLM 311
++ + CIG+ +Q++DDILD T LGK G D+ +G TYP +
Sbjct: 183 ALSSQLDEQSTYHIKQFGHCIGMSYQIIDDILDYTSDEATLGKPVGSDIRNGHITYPLMA 242
Query: 312 GIENAKSFAGELLGQAIEEL 331
I N K + L ++ L
Sbjct: 243 AIANLKEQDDDKLEAVVKHL 262
>TIGR_CMR|SO_3653 [details] [associations]
symbol:SO_3653 "octaprenyl-diphosphate synthase"
species:211586 "Shewanella oneidensis MR-1" [GO:0006744 "ubiquinone
biosynthetic process" evidence=ISS] [GO:0009234 "menaquinone
biosynthetic process" evidence=ISS] [GO:0016765 "transferase
activity, transferring alkyl or aryl (other than methyl) groups"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102 OMA:YITSAGG
RefSeq:NP_719195.2 ProteinModelPortal:Q8EB79 GeneID:1171312
KEGG:son:SO_3653 PATRIC:23526992 ProtClustDB:CLSK907271
Uniprot:Q8EB79
Length = 331
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 75/236 (31%), Positives = 116/236 (49%)
Query: 97 YSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRS 156
Y + GGKR+RPLL + + V + A +E IHT SL+HDD+ +D RR
Sbjct: 46 YIINGGGKRLRPLLSVLAARAVDYQGEAHLKLAAIIEFIHTASLLHDDV--VDESTLRRG 103
Query: 157 KPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGE 216
+ ++ +FG S ++L GD L + + + + + RV+R +A+ + L GE
Sbjct: 104 RETANALFGNSASVLVGDFLYTRSFQMMTE----LDSMRVLRVLADTTNV-----LAEGE 154
Query: 217 FVDIASEGKDVSLKELEYIHVH--KTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCIGL 274
+ + + D E Y+ V KTAKL E + + +Y + +G
Sbjct: 155 VLQLMN-CNDPDTTEESYMRVIYCKTAKLFEAATLLAAVLAGASPEQETALGDYGKYLGT 213
Query: 275 LFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEE 330
FQ+ DD+LD T S+ELGK G DLA GK T P + I + +L+ QAIE+
Sbjct: 214 AFQLTDDLLDYTADSDELGKNIGDDLAEGKPTLPLIYAIAHGTEEEKQLIRQAIEQ 269
>UNIPROTKB|P0AD57 [details] [associations]
symbol:ispB "IspB" species:83333 "Escherichia coli K-12"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016094
"polyprenol biosynthetic process" evidence=IMP] [GO:0004659
"prenyltransferase activity" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
EMBL:U18997 eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0016094 GO:GO:0004659 KO:K02523 EMBL:D13267 EMBL:X68873
PIR:E65109 RefSeq:NP_417654.1 RefSeq:YP_491372.1
ProteinModelPortal:P0AD57 SMR:P0AD57 IntAct:P0AD57 PRIDE:P0AD57
EnsemblBacteria:EBESCT00000004959 EnsemblBacteria:EBESCT00000017333
GeneID:12932117 GeneID:947364 KEGG:ecj:Y75_p3107 KEGG:eco:b3187
PATRIC:32121794 EchoBASE:EB0017 EcoGene:EG10017
HOGENOM:HOG000009102 OMA:YITSAGG ProtClustDB:PRK10888
BioCyc:EcoCyc:OPPSYN-MONOMER BioCyc:ECOL316407:JW3154-MONOMER
BioCyc:MetaCyc:OPPSYN-MONOMER Genevestigator:P0AD57 Uniprot:P0AD57
Length = 323
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 74/259 (28%), Positives = 134/259 (51%)
Query: 75 VNKALDEAVVLQPPVKIHKAMRYSLLAGG-KRVRPLLCIASCELVGGDESWAMPAACALE 133
VN A+ E L V++ + Y +++GG KR+RP++ + + VG + + + A +E
Sbjct: 17 VNAAILEQ--LNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYEGNAHVTIAALIE 74
Query: 134 MIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSP 193
IHT +L+HDD+ +D + RR K ++ FG + ++L GD + + A + + ++ +
Sbjct: 75 FIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQ-MMTSLGSL-- 129
Query: 194 DRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHV--HKTAKLLEXXXXXX 251
+V+ ++E A+ V + GE + + + D + E Y+ V KTA+L E
Sbjct: 130 -KVLEVMSE---AVNV--IAEGEVLQLMNVN-DPDITEENYMRVIYSKTARLFEAAAQCS 182
Query: 252 XXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLM 311
E + +++Y R +G FQ++DD+LD E+LGK G DL GK T P L
Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLH 242
Query: 312 GIENAKSFAGELLGQAIEE 330
+ + +++ AIE+
Sbjct: 243 AMHHGTPEQAQMIRTAIEQ 261
>TIGR_CMR|APH_1247 [details] [associations]
symbol:APH_1247 "octaprenyl-diphosphate synthase"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
ProtClustDB:CLSK749549 RefSeq:YP_505772.1 ProteinModelPortal:Q2GIM9
STRING:Q2GIM9 GeneID:3930831 KEGG:aph:APH_1247 PATRIC:20951282
OMA:MIPEISN BioCyc:APHA212042:GHPM-1251-MONOMER Uniprot:Q2GIM9
Length = 316
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 66/224 (29%), Positives = 121/224 (54%)
Query: 95 MRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERR 154
+++ +L+GGKR RP++ +A+C ++G ++ + A A+E +H+ +L+HDD+ +D + R
Sbjct: 31 IQHLILSGGKRTRPVMLLAACGMLGCTDARRIVVAAAIEFLHSATLLHDDV--VDKSDMR 88
Query: 155 RSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVA 214
R ++ ++G +IL GD L + A + + VS + + + ++ + + + +V+
Sbjct: 89 RGVETANSIWGNKASILVGDFLFATAFQWI------VSCNSI-QLLSVLSNTASI--IVS 139
Query: 215 GEFVDIA-SEGKDVS-LKELEYIHVHKTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCI 272
GE + S D+S K LE I KTA L ++ +R++
Sbjct: 140 GEMQQLVHSSSLDISRTKYLEIIS-SKTAVLFSAACESAAVLHDVGTLQRNALRDWGFNF 198
Query: 273 GLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENA 316
G++FQ++DDILD T + ELGK D+ SGK T P ++ E A
Sbjct: 199 GIVFQILDDILDYTANQNELGKRTYNDIVSGKVTLPLIIAYEGA 242
>UNIPROTKB|Q9UWR6 [details] [associations]
symbol:fgs "Geranylfarnesyl diphosphate synthase"
species:56636 "Aeropyrum pernix" [GO:0004659 "prenyltransferase
activity" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004659 EMBL:AB025791
ProteinModelPortal:Q9UWR6 BioCyc:MetaCyc:MONOMER-15678
BRENDA:2.5.1.B1 GO:GO:0044687 Uniprot:Q9UWR6
Length = 318
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 79/250 (31%), Positives = 129/250 (51%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG--DESWAMPAACALEMIHTMSLIHDDL 145
P ++ A + + AGGKR+RPL+ + + ++GG E+ A+P A ++E HT SLIHDD+
Sbjct: 15 PDRLSGASLHLIKAGGKRLRPLITLLTARMLGGLEAEARAIPLAASIETAHTFSLIHDDI 74
Query: 146 PFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIA-GVSPDRVVRAIAEMC 204
+D DE RR P +H V+G+ AILAGD L + A + +A + G+S ++ RA ++
Sbjct: 75 --MDRDEVRRGVPTTHVVYGDDWAILAGDTLHAAAFKMIADSREWGMSHEQAYRAF-KVL 131
Query: 205 SAMGVEGLVAGEFVDIASEGK-DVSLKE-LEYIHVHKTAKLLEXXXXXXXXXXXXXXIEV 262
S ++ + G+ D+ E DV + + L + + KT L+E E+
Sbjct: 132 SEAAIQ-ISRGQAYDMLFEETWDVDVADYLNMVRL-KTGALIEAAARIGAVAAGAGS-EI 188
Query: 263 ERVRNYARC-IGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENA-KSFA 320
E++ G+ FQ+ DDIL V + GK DL GK T + ++ A +
Sbjct: 189 EKMMGEVGMNAGIAFQIRDDILGVIGDPKVTGKPVYNDLRRGKKTLLVIYAVKKAGRREI 248
Query: 321 GELLGQAIEE 330
+L+G E
Sbjct: 249 VDLIGPKASE 258
>TIGR_CMR|CPS_4513 [details] [associations]
symbol:CPS_4513 "octaprenyl-diphosphate synthase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
OMA:YITSAGG RefSeq:YP_271161.1 ProteinModelPortal:Q47VL1
STRING:Q47VL1 GeneID:3518869 KEGG:cps:CPS_4513 PATRIC:21471849
BioCyc:CPSY167879:GI48-4522-MONOMER Uniprot:Q47VL1
Length = 327
Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 69/235 (29%), Positives = 118/235 (50%)
Query: 97 YSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRS 156
Y + GGKR+RP+L + + + A +E IHT +L+HDD+ +D RR
Sbjct: 42 YIVNGGGKRMRPMLTVLAARAFAYQGDKHLEIAAIIEFIHTATLLHDDV--VDESNMRRG 99
Query: 157 KPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGE 216
+ ++ +FG S ++L GD L + + + + + + R++ ++E A + + GE
Sbjct: 100 RETANALFGNSASVLVGDFLYTRSFQ-MMTKLGDM---RIMDILSE---ATNI--VAEGE 150
Query: 217 FVDIASEGKDVSLKELEYIHVH--KTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCIGL 274
+ + + D S E Y+ V KTAKL E + + +Y + +G
Sbjct: 151 VLQLMN-CNDASTTEESYMQVIYCKTAKLFEAATRLAAVIAKQDAKIEQAMADYGKYLGT 209
Query: 275 LFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIE 329
FQ+VDDI+D T ++E+GK G DLA GK T P L +++ +L+ +AIE
Sbjct: 210 AFQLVDDIMDYTADAKEMGKNVGDDLAEGKPTLPLLYAMKHGNEAQQKLIKEAIE 264
>UNIPROTKB|Q2GL13 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:212042
"Anaplasma phagocytophilum HZ" [GO:0008299 "isoprenoid biosynthetic
process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000235 GenomeReviews:CP000235_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 OMA:DIHANKT KO:K00795
RefSeq:YP_504938.1 ProteinModelPortal:Q2GL13 STRING:Q2GL13
GeneID:3930764 KEGG:aph:APH_0329 PATRIC:20949240
ProtClustDB:CLSK747370 BioCyc:APHA212042:GHPM-359-MONOMER
Uniprot:Q2GL13
Length = 280
Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 64/230 (27%), Positives = 116/230 (50%)
Query: 73 EQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACAL 132
+++ K ++ V P + A+ Y +L GK +R L + + G +P A+
Sbjct: 19 KELTKLIETQVTGGPAAGLVDAIGYCILPPGKCLRAFLASSVAQTFGVSIERTLPLCLAI 78
Query: 133 EMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVA-VNIAGV 191
E++H+ SL+HDDLP +DN RR K + H GE+ A+L GDALL+L E ++ ++ +
Sbjct: 79 EVLHSYSLVHDDLPSMDNAPTRRGKNSCHIEHGEALALLTGDALLTLTFELLSSMDESCT 138
Query: 192 SPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEXXXXXX 251
++R I++ C G G+VAG+ +D+ + + SL+ ++ IH KTA+L
Sbjct: 139 VKCAIIRVISDAC---GHRGMVAGQALDMGN--LEPSLEAVKQIHKLKTARLFSAACESG 193
Query: 252 XXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSE--ELGKTAGKD 299
+ + +Y +G FQ DD+ D+ + + + G++
Sbjct: 194 AILAEVSTANQQALASYGETLGCAFQAKDDLCDINEDDSCLNIARILGRE 243
>TIGR_CMR|APH_0329 [details] [associations]
symbol:APH_0329 "geranyltranstransferase" species:212042
"Anaplasma phagocytophilum HZ" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0008299 "isoprenoid biosynthetic
process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000235 GenomeReviews:CP000235_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 OMA:DIHANKT KO:K00795
RefSeq:YP_504938.1 ProteinModelPortal:Q2GL13 STRING:Q2GL13
GeneID:3930764 KEGG:aph:APH_0329 PATRIC:20949240
ProtClustDB:CLSK747370 BioCyc:APHA212042:GHPM-359-MONOMER
Uniprot:Q2GL13
Length = 280
Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 64/230 (27%), Positives = 116/230 (50%)
Query: 73 EQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACAL 132
+++ K ++ V P + A+ Y +L GK +R L + + G +P A+
Sbjct: 19 KELTKLIETQVTGGPAAGLVDAIGYCILPPGKCLRAFLASSVAQTFGVSIERTLPLCLAI 78
Query: 133 EMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVA-VNIAGV 191
E++H+ SL+HDDLP +DN RR K + H GE+ A+L GDALL+L E ++ ++ +
Sbjct: 79 EVLHSYSLVHDDLPSMDNAPTRRGKNSCHIEHGEALALLTGDALLTLTFELLSSMDESCT 138
Query: 192 SPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEXXXXXX 251
++R I++ C G G+VAG+ +D+ + + SL+ ++ IH KTA+L
Sbjct: 139 VKCAIIRVISDAC---GHRGMVAGQALDMGN--LEPSLEAVKQIHKLKTARLFSAACESG 193
Query: 252 XXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSE--ELGKTAGKD 299
+ + +Y +G FQ DD+ D+ + + + G++
Sbjct: 194 AILAEVSTANQQALASYGETLGCAFQAKDDLCDINEDDSCLNIARILGRE 243
>TIGR_CMR|DET_0389 [details] [associations]
symbol:DET_0389 "heptaprenyl diphosphate synthase
component II" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0009234 "menaquinone biosynthetic process" evidence=ISS]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000027 GenomeReviews:CP000027_GR
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 OMA:EFIVERK
RefSeq:YP_181134.1 ProteinModelPortal:Q3Z9G5 STRING:Q3Z9G5
GeneID:3230282 KEGG:det:DET0389 PATRIC:21607847
ProtClustDB:CLSK837510 BioCyc:DETH243164:GJNF-389-MONOMER
Uniprot:Q3Z9G5
Length = 324
Score = 238 (88.8 bits), Expect = 4.3e-23, Sum P(2) = 4.3e-23
Identities = 72/215 (33%), Positives = 106/215 (49%)
Query: 99 LLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKP 158
+L GGK +RP L + S G +P A + EM+H +L+HDD +D + RRS+
Sbjct: 43 ILVGGKVLRPALSMLSAMCFGTGIKKVLPLATSSEMLHIATLVHDDA--IDKADTRRSRR 100
Query: 159 ASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFV 218
+ V+G AIL GD L + A E VA + R+V A+ ++ + +GE
Sbjct: 101 TVNSVWGLEKAILLGDFLFAHAAE-VAAETDNM---RIVTLFAQT-----LQIIASGELK 151
Query: 219 DI-ASEGKDVSLKE-LEYIHVHKTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCIGLLF 276
AS D S + LE I KTA L + E +R+Y +GL F
Sbjct: 152 QAYASFNPDQSYENYLERIS-GKTAALFVMATKGGAILADASPSDEEIMRSYGYNLGLSF 210
Query: 277 QVVDDILDVTKSSEELGKTAGKDLASGKATYPKLM 311
Q+VDDILD +++++GK G DL +G T P L+
Sbjct: 211 QIVDDILDFVGNAKDMGKPVGSDLNNGTVTLPALL 245
Score = 43 (20.2 bits), Expect = 4.3e-23, Sum P(2) = 4.3e-23
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 311 MGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ + AK +A +L Q + +L A ++ LY LA +I R+N
Sbjct: 284 LSYKEAKRYA-DLACQDLSKLPKTAARES--LYQLAEFIVERKN 324
>ZFIN|ZDB-GENE-030131-4430 [details] [associations]
symbol:pdss1 "prenyl (decaprenyl) diphosphate
synthase, subunit 1" species:7955 "Danio rerio" [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016740 "transferase
activity" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 ZFIN:ZDB-GENE-030131-4430
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
eggNOG:COG0142 GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 CTD:23590
HOVERGEN:HBG054389 KO:K12504 OMA:QQFPELH OrthoDB:EOG4TQM94
EMBL:CR385039 EMBL:BC093175 IPI:IPI00493659 RefSeq:NP_001017656.1
UniGene:Dr.78018 STRING:Q567H1 Ensembl:ENSDART00000040865
GeneID:550349 KEGG:dre:550349 InParanoid:Q567H1 NextBio:20879604
Uniprot:Q567H1
Length = 411
Score = 258 (95.9 bits), Expect = 6.2e-22, P = 6.2e-22
Identities = 76/221 (34%), Positives = 112/221 (50%)
Query: 103 GKRVRPLLCIA---SCELVGGDESWAMPA----ACALEMIHTMSLIHDDLPFLDNDERRR 155
GK RP++ I +C + E +PA A EMIHT SL+HDD+ +D+ ++RR
Sbjct: 129 GKAFRPMIVILMARACNVHSNKEGVLLPAQRSIAMISEMIHTASLVHDDV--IDDSDKRR 186
Query: 156 SKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAG 215
K + V+GE AILAGD +LS A ++ +A + VV ++++ +E LV G
Sbjct: 187 GKNTINNVWGERKAILAGDFILSAA----SMALARIGNTTVVSVLSQV-----IEDLVRG 237
Query: 216 EFVDIAS-EGKDVSLKELEYIHVHKTAKLLEXXXXXXXXXXXXXXIEVERVR-NYARCIG 273
EF+ + S E ++ K KTA L+ EV + Y R +G
Sbjct: 238 EFMQLGSKENENERFKHYLEKTFKKTASLIANSCKAVSILVNSDP-EVHEIAYQYGRNVG 296
Query: 274 LLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIE 314
+ FQ+VDDILD T ++ LGK + DL G AT P L +
Sbjct: 297 IAFQLVDDILDFTSNANCLGKPSAADLKLGLATGPVLFACQ 337
>UNIPROTKB|O50410 [details] [associations]
symbol:idsB "Geranylgeranyl diphosphate synthase, type I"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 GO:GO:0005829 GenomeReviews:AL123456_GR
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
EMBL:BX842582 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 KO:K13787 EMBL:CP003248 PIR:F70973
RefSeq:NP_217900.1 RefSeq:YP_006516867.1 ProteinModelPortal:O50410
SMR:O50410 EnsemblBacteria:EBMYCT00000000229 GeneID:13316985
GeneID:887680 KEGG:mtu:Rv3383c KEGG:mtv:RVBD_3383c PATRIC:18156138
TubercuList:Rv3383c OMA:DLISEHK ProtClustDB:CLSK792459
Uniprot:O50410
Length = 350
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 79/258 (30%), Positives = 121/258 (46%)
Query: 101 AGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPAS 160
+ GK R L A+ GGD A P + A+E++H +L+HDD+ +D D RR +P
Sbjct: 67 SSGKYFRAALVYAAAAACGGDVGDATPVSAAVELVHNFTLLHDDV--MDGDATRRGRPTV 124
Query: 161 HEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRV-VRAIAEMCSAMGVEGLVAGEFVD 219
V+G AIL GDAL + A V + + G++ + V VRAI + M L G+F D
Sbjct: 125 WSVWGVGVAILLGDALHATA---VRI-LTGLTDECVAVRAIRRL--QMSCLDLCIGQFED 178
Query: 220 IASEGK-DVSLKELEYIHVHKTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCIGLLFQV 278
EG+ +V++ + + KTA L + + + +GL FQ
Sbjct: 179 CLLEGQPEVTVDDYLRMAAGKTAALTGCCCALGALVANADDATIAALERFGHELGLAFQC 238
Query: 279 VDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL--LGQAIEELAYFEA 336
VDD++ + GK G DLA KAT P + + + A EL L QA + +
Sbjct: 239 VDDLIGIWGDPGVTGKPVGNDLARRKATLPVVAALNSRSEAATELAALYQAPAAMTASDV 298
Query: 337 SKAAPLYFLAN--YIASR 352
+A L +A ++A R
Sbjct: 299 ERATALVKVAGGGHVAQR 316
>UNIPROTKB|O06428 [details] [associations]
symbol:grcC1 "Heptaprenyl diphosphate synthase"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 GO:GO:0005886 GO:GO:0040007 GO:GO:0005618
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
EMBL:BX842573 HOGENOM:HOG000009104 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K00805 EMBL:CP003248 PIR:E70549
RefSeq:NP_215076.1 RefSeq:NP_334997.1 RefSeq:YP_006513895.1
SMR:O06428 EnsemblBacteria:EBMYCT00000001031
EnsemblBacteria:EBMYCT00000071419 GeneID:13318436 GeneID:887647
GeneID:924969 KEGG:mtc:MT0588 KEGG:mtu:Rv0562 KEGG:mtv:RVBD_0562
PATRIC:18122992 TubercuList:Rv0562 OMA:SIKAMNV
ProtClustDB:CLSK790596 Uniprot:O06428
Length = 335
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 71/219 (32%), Positives = 109/219 (49%)
Query: 101 AGGKRVRPLLCIASCELVGGDESWAMPAACA-LEMIHTMSLIHDDLPFLDNDERRRSKPA 159
AGGKR RPL + S ++ ++ A+ A A +EMIH +L HDD+ +D + RR P+
Sbjct: 54 AGGKRFRPLFTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDV--MDEAQVRRGAPS 111
Query: 160 SHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVD 219
++ +G + AILAGD LL+ A VA + P+ VR IA+ + LV G+ +
Sbjct: 112 ANAQWGNNVAILAGDYLLATASRLVA----RLGPE-AVRIIADTFAQ-----LVTGQMRE 161
Query: 220 IASEGKDVSLKELEYIHV--HKTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCIGLLFQ 277
++V E +Y+ V KT L+ +VER+ +G FQ
Sbjct: 162 TRGTSENVDSIE-QYLKVVQEKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQ 220
Query: 278 VVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENA 316
+ DDI+D+ S+E GK G D+ G T P L + +
Sbjct: 221 IADDIIDIDSESDESGKLPGTDVREGVHTLPMLYALRES 259
>UNIPROTKB|Q2GD75 [details] [associations]
symbol:NSE_0694 "Putative geranyltranstransferase"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
GO:GO:0003824 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0016740 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 KO:K00795 RefSeq:YP_506571.1
ProteinModelPortal:Q2GD75 STRING:Q2GD75 GeneID:3931424
KEGG:nse:NSE_0694 PATRIC:22681407 OMA:LAESSHI
ProtClustDB:CLSK2527634 BioCyc:NSEN222891:GHFU-707-MONOMER
Uniprot:Q2GD75
Length = 256
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 73/218 (33%), Positives = 109/218 (50%)
Query: 69 IRKAEQ-VNKALDEAVVLQPPV-KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAM 126
++KA + + + L E + L P K+ +A+RYSLLA +R L + L +
Sbjct: 7 LQKASRLIRETLKENLSLFPSEDKLFQAIRYSLLAESSHIRGFLVLELGTLFNIPYVDTI 66
Query: 127 PAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAV 186
A A+EMIH+ SLIHDDLP LDN + RR++PA H F ESTAILAGDALL LA + ++
Sbjct: 67 EVAAAIEMIHSFSLIHDDLPALDNSDERRNQPACHIAFQESTAILAGDALLVLAYQMLS- 125
Query: 187 NIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEX 246
R + + C++ V ++ G+ D+ S + I+ K+ L
Sbjct: 126 --------RYGTPLVQ-CTSKYVLEMITGQVHDVIGS----STLTADEINKMKSGSLFAL 172
Query: 247 XXXXXXXXXXXXXIEVERVRNYARCIGLLFQVVDDILD 284
E+ + + IG++FQ VDDI D
Sbjct: 173 SCSSVGHLANSGQSELTVLEAFGYEIGIIFQAVDDIKD 210
>UNIPROTKB|Q3ACT5 [details] [associations]
symbol:hepT "Heptaprenyl diphosphate synthase component II"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] [GO:0009234 "menaquinone biosynthetic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000141 GenomeReviews:CP000141_GR
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K00805 GO:GO:0009234
OMA:KLYRFGY RefSeq:YP_360049.1 ProteinModelPortal:Q3ACT5
STRING:Q3ACT5 GeneID:3727089 KEGG:chy:CHY_1206 PATRIC:21275548
BioCyc:CHYD246194:GJCN-1205-MONOMER Uniprot:Q3ACT5
Length = 326
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 70/229 (30%), Positives = 107/229 (46%)
Query: 91 IHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDN 150
+H + L AGGKR+RP + + +L D P A ALE+IH +L+HDD+ +DN
Sbjct: 37 LHDPAMHLLKAGGKRLRPAFALLAAKLGDYDFEKVKPLAVALELIHMATLVHDDV--VDN 94
Query: 151 DERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVE 210
RR P +G +I GD + + +L + I + V + +AE+ M
Sbjct: 95 SMLRRGLPTVKANWGNKMSIHIGDRIFAKSL----LLIDSCKNNYVAKVLAEVSVKM--- 147
Query: 211 GLVAGEFVDIASEGKDVSLKELEY-IHV-HKTAKLLEXXXXXXXXXXXXXXIEVERVRNY 268
GE + + K++S +Y I + KTA LL V ++ Y
Sbjct: 148 --TTGEIQQL-NGAKNISTSIKDYLIKIKRKTALLLSASCELGGVMANVSPRVVNALKQY 204
Query: 269 ARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAK 317
+G+ FQ++DDILD T + LGK G DL G T P L+ ++ K
Sbjct: 205 GLYVGMAFQIIDDILDFTADEKVLGKPVGSDLRQGLITLPVLLALKRDK 253
>TIGR_CMR|CHY_1206 [details] [associations]
symbol:CHY_1206 "heptaprenyl diphosphate synthase
component II" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] [GO:0009234 "menaquinone biosynthetic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000141 GenomeReviews:CP000141_GR
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K00805 GO:GO:0009234
OMA:KLYRFGY RefSeq:YP_360049.1 ProteinModelPortal:Q3ACT5
STRING:Q3ACT5 GeneID:3727089 KEGG:chy:CHY_1206 PATRIC:21275548
BioCyc:CHYD246194:GJCN-1205-MONOMER Uniprot:Q3ACT5
Length = 326
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 70/229 (30%), Positives = 107/229 (46%)
Query: 91 IHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDN 150
+H + L AGGKR+RP + + +L D P A ALE+IH +L+HDD+ +DN
Sbjct: 37 LHDPAMHLLKAGGKRLRPAFALLAAKLGDYDFEKVKPLAVALELIHMATLVHDDV--VDN 94
Query: 151 DERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVE 210
RR P +G +I GD + + +L + I + V + +AE+ M
Sbjct: 95 SMLRRGLPTVKANWGNKMSIHIGDRIFAKSL----LLIDSCKNNYVAKVLAEVSVKM--- 147
Query: 211 GLVAGEFVDIASEGKDVSLKELEY-IHV-HKTAKLLEXXXXXXXXXXXXXXIEVERVRNY 268
GE + + K++S +Y I + KTA LL V ++ Y
Sbjct: 148 --TTGEIQQL-NGAKNISTSIKDYLIKIKRKTALLLSASCELGGVMANVSPRVVNALKQY 204
Query: 269 ARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAK 317
+G+ FQ++DDILD T + LGK G DL G T P L+ ++ K
Sbjct: 205 GLYVGMAFQIIDDILDFTADEKVLGKPVGSDLRQGLITLPVLLALKRDK 253
>TIGR_CMR|NSE_0694 [details] [associations]
symbol:NSE_0694 "putative geranyltranstransferase"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
GO:GO:0003824 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0016740 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 KO:K00795 RefSeq:YP_506571.1
ProteinModelPortal:Q2GD75 STRING:Q2GD75 GeneID:3931424
KEGG:nse:NSE_0694 PATRIC:22681407 OMA:LAESSHI
ProtClustDB:CLSK2527634 BioCyc:NSEN222891:GHFU-707-MONOMER
Uniprot:Q2GD75
Length = 256
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 73/218 (33%), Positives = 109/218 (50%)
Query: 69 IRKAEQ-VNKALDEAVVLQPPV-KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAM 126
++KA + + + L E + L P K+ +A+RYSLLA +R L + L +
Sbjct: 7 LQKASRLIRETLKENLSLFPSEDKLFQAIRYSLLAESSHIRGFLVLELGTLFNIPYVDTI 66
Query: 127 PAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAV 186
A A+EMIH+ SLIHDDLP LDN + RR++PA H F ESTAILAGDALL LA + ++
Sbjct: 67 EVAAAIEMIHSFSLIHDDLPALDNSDERRNQPACHIAFQESTAILAGDALLVLAYQMLS- 125
Query: 187 NIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEX 246
R + + C++ V ++ G+ D+ S + I+ K+ L
Sbjct: 126 --------RYGTPLVQ-CTSKYVLEMITGQVHDVIGS----STLTADEINKMKSGSLFAL 172
Query: 247 XXXXXXXXXXXXXIEVERVRNYARCIGLLFQVVDDILD 284
E+ + + IG++FQ VDDI D
Sbjct: 173 SCSSVGHLANSGQSELTVLEAFGYEIGIIFQAVDDIKD 210
>TIGR_CMR|CBU_0382 [details] [associations]
symbol:CBU_0382 "octylprenyl diphosphate synthase-like
protein" species:227377 "Coxiella burnetii RSA 493" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161 GO:GO:0004337
KO:K02523 HOGENOM:HOG000009102 OMA:SIKAMNV RefSeq:NP_819421.1
ProteinModelPortal:Q83EE2 GeneID:1208265 KEGG:cbu:CBU_0382
PATRIC:17929459 ProtClustDB:CLSK914032
BioCyc:CBUR227377:GJ7S-383-MONOMER Uniprot:Q83EE2
Length = 332
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 73/273 (26%), Positives = 137/273 (50%)
Query: 64 FEEYMIRKAEQVN-KALDEAVV--LQPPVKIHKAMRYSLL-AGGKRVRPLLCIASCELVG 119
FE +R+ Q + +A+D +V L V + + + + ++ +GGKR+RPL+ + + G
Sbjct: 10 FEIESLRQPVQNDIEAVDALIVKELSSHVPLIETITHHIIQSGGKRLRPLVVLLTARACG 69
Query: 120 GDESWA-MPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLS 178
++ A +E IHT +L+HDD+ +D +RR + ++ ++G S ++L GD L S
Sbjct: 70 YEQDVEHQELATVIEFIHTATLLHDDV--VDKSTQRRGQKTANALWGNSASVLVGDFLYS 127
Query: 179 LALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHV- 237
A + +A + V P +++ +A + + GE + ++ D + E+ Y V
Sbjct: 128 RAFQILARR-SNV-P--IMKILATTTNQIS-----EGEVWQLMNQN-DPDIDEVTYYEVI 177
Query: 238 -HKTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTA 296
KTA+L + + + +G+ +Q++DD+LD +K + L K
Sbjct: 178 RRKTAQLFSAAAEIGAIVATKNETWQKSMAAFGFHLGMAYQIIDDLLDYSKDASALDKNV 237
Query: 297 GKDLASGKATYPKLMGIENAKSFAGELLGQAIE 329
G DLA GKAT P + + A+ E + +AI+
Sbjct: 238 GDDLAEGKATLPLIYAKQQAQPAQAEHIREAIK 270
>TIGR_CMR|NSE_0238 [details] [associations]
symbol:NSE_0238 "polyprenyl synthetase family protein"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0004659
"prenyltransferase activity" evidence=ISS] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000237
GenomeReviews:CP000237_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_506132.1 ProteinModelPortal:Q2GEG4 STRING:Q2GEG4
GeneID:3932073 KEGG:nse:NSE_0238 PATRIC:22680571 OMA:MIYYKTA
ProtClustDB:CLSK2527623 BioCyc:NSEN222891:GHFU-268-MONOMER
Uniprot:Q2GEG4
Length = 321
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 74/235 (31%), Positives = 117/235 (49%)
Query: 93 KAMRYS--LLAGGKRVRPLLCIASCELV-GGDESWAMPAACALEMIHTMSLIHDDLPFLD 149
K++ Y+ +L+ GKR+R LL + S L D + + AA +E+IH +L+HDD+ +D
Sbjct: 33 KSIEYAKKMLSSGKRIRALLSLLSFALCKNADTNAEIRAAATIELIHNATLMHDDV--VD 90
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGV 209
+ RR KP + G ++L GD LLS+A E + + +S VV +++ +
Sbjct: 91 ENSIRRGKPNIKSIHGNKISVLTGDFLLSVAFE-IILECKNLS---VVLLLSKTAKQLS- 145
Query: 210 EGLVAGEFVDIASEGKDVSLKELEYIHV--HKTAKLLEXXXXXXXXXXXXXXIEVERVRN 267
GE + + S G+ VS E EY+ V KTA L V +R
Sbjct: 146 ----EGEMLQLQSIGEIVS--ESEYLEVIARKTAVLFSAAAEIAAILTGKQEYVVI-LRE 198
Query: 268 YARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGE 322
IG+ FQ+ DD+LD + +E+GK+ G D K T P ++ +AKS A +
Sbjct: 199 IGFLIGMAFQITDDVLDYGEP-QEVGKSVGNDFRECKFTLPCVIAYRDAKSKAAK 252
>UNIPROTKB|Q8PYS1 [details] [associations]
symbol:MM_0789 "Geranylfarnesyl diphosphate synthase"
species:192952 "Methanosarcina mazei Go1" [GO:0004659
"prenyltransferase activity" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 EMBL:AE008384 GenomeReviews:AE008384_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004659 GO:GO:0044687 RefSeq:NP_632813.1 PDB:3IPI PDBsum:3IPI
ProteinModelPortal:Q8PYS1 DNASU:1479131 GeneID:1479131
KEGG:mma:MM_0789 HOGENOM:HOG000224637 KO:K02523 OMA:IAYQIVD
ProtClustDB:CLSK782700 EvolutionaryTrace:Q8PYS1 Uniprot:Q8PYS1
Length = 295
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 68/214 (31%), Positives = 109/214 (50%)
Query: 75 VNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEM 134
V + E++ L + K + + +GGKR+RP++ + E+ G S ++ AA A+EM
Sbjct: 22 VEAGIKESITLIEDPGLKKMVEHVCHSGGKRIRPIILLLVSEICSGSYSRSLNAALAVEM 81
Query: 135 IHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSP- 193
+H+ SLIHDDL LD RR+ P++ E FG S A+L GD L +A +IA +SP
Sbjct: 82 MHSASLIHDDL--LDQGLVRRNLPSAPEKFGPSGALLCGDYL-------IAKSIAFISPY 132
Query: 194 -DRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHV--HKTAKLLEXXXXX 250
++V++ + G++ + GE +D+ E D S E +Y KTA L
Sbjct: 133 GEKVIQDFGKA----GMD-MAEGEVLDLKLE--DESFGENDYFKCIYKKTASLFAISASI 185
Query: 251 XXXXXXXXXIEVERVRNYARCIGLLFQVVDDILD 284
ER ++ +G +Q+VDDIL+
Sbjct: 186 GAYTGGAEEELAERFSHFGNALGTAYQIVDDILE 219
>UNIPROTKB|P55785 [details] [associations]
symbol:hepT "Heptaprenyl diphosphate synthase component 2"
species:1422 "Geobacillus stearothermophilus" [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0000010
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765
GO:GO:0009234 InterPro:IPR014119 TIGRFAMs:TIGR02748 EMBL:D49976
ProteinModelPortal:P55785 Uniprot:P55785
Length = 320
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 74/246 (30%), Positives = 116/246 (47%)
Query: 75 VNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEM 134
V + L+ AV + + +A + L AGGKR+RP+ + + D A ALE+
Sbjct: 17 VEEELERAVQSEYG-PLGEAALHLLQAGGKRIRPVFVLLAARFGQYDLERMKHVAVALEL 75
Query: 135 IHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPD 194
IH SL+HDD+ +D+ + RR +P + A+ GD L + +LE +A +
Sbjct: 76 IHMASLVHDDV--IDDADLRRGRPTIKAKWSNRFAMYTGDYLFARSLERMA-ELGNPRAH 132
Query: 195 RVV-RAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKE-LEYIHVHKTAKLLEXXXXXX 251
+V+ + I E+C GE I + + D L+ L I KTA L+
Sbjct: 133 QVLAKTIVEVCR---------GEIEQIKDKYRFDQPLRTYLRRIR-RKTALLIAASCQLG 182
Query: 252 XXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLM 311
V+R+ + +G+ FQ+ DDILD T + E+LGK AG DL G T P L
Sbjct: 183 ALAAGAPEPIVKRLYWFGHYVGMSFQITDDILDFTGTEEQLGKPAGSDLLQGNVTLPVLY 242
Query: 312 GIENAK 317
+ + +
Sbjct: 243 ALSDER 248
>MGI|MGI:1889278 [details] [associations]
symbol:Pdss1 "prenyl (solanesyl) diphosphate synthase,
subunit 1" species:10090 "Mus musculus" [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=ISO;IDA] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISO;IDA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=ISO;IDA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IDA] [GO:0051290 "protein heterotetramerization"
evidence=IPI] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00232 MGI:MGI:1889278 GO:GO:0005739
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0006744 UniGene:Mm.249752 GO:GO:0046982 GO:GO:0051290
eggNOG:COG0142 GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104
GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
CTD:23590 HOVERGEN:HBG054389 KO:K12504 OMA:QQFPELH BRENDA:2.5.1.11
EMBL:AB210841 EMBL:CT030013 EMBL:BC026820 EMBL:BC107273
EMBL:BC107274 EMBL:AF118855 IPI:IPI00123984 RefSeq:NP_062374.2
ProteinModelPortal:Q33DR2 SMR:Q33DR2 STRING:Q33DR2
PhosphoSite:Q33DR2 PRIDE:Q33DR2 Ensembl:ENSMUST00000053729
GeneID:56075 KEGG:mmu:56075 UCSC:uc008inq.1 InParanoid:Q33DR2
NextBio:311864 Bgee:Q33DR2 Genevestigator:Q33DR2
GermOnline:ENSMUSG00000026784 Uniprot:Q33DR2
Length = 409
Score = 243 (90.6 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 69/221 (31%), Positives = 113/221 (51%)
Query: 103 GKRVRPLLCIA---SCELVGGD--ESWAMPAACAL--EMIHTMSLIHDDLPFLDNDERRR 155
GK RP++ + +C + + E A + AL EMIHT +L+HDD+ +D+ RR
Sbjct: 127 GKAFRPIIVVLMARACNIHHNNAREMQASQRSIALVAEMIHTATLVHDDV--IDDASSRR 184
Query: 156 SKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAG 215
K ++++GE A+LAGD +LS A +V +A + VV +A++ +E LV G
Sbjct: 185 GKHTVNKIWGEKKAVLAGDLILSAA----SVALARIGNTAVVSMLAQV-----IEDLVRG 235
Query: 216 EFVDIASEGKDVSLKELEYIH--VHKTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCIG 273
EF+ + S+ + + + Y+ KTA L+ + E Y + +G
Sbjct: 236 EFLQLGSKENE-NERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVG 294
Query: 274 LLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIE 314
+ FQ++DD+LD T S+++GK DL G AT P L +
Sbjct: 295 IAFQLIDDVLDFTSCSDQMGKPTSADLKLGIATGPVLFACQ 335
>UNIPROTKB|E1BZW8 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0050347
"trans-octaprenyltranstransferase activity" evidence=IEA]
[GO:0051290 "protein heterotetramerization" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0051290 GeneTree:ENSGT00530000063378 GO:GO:0000010
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
OMA:QQFPELH EMBL:AADN02000555 IPI:IPI00572129
ProteinModelPortal:E1BZW8 Ensembl:ENSGALT00000012224
NextBio:20823389 Uniprot:E1BZW8
Length = 366
Score = 239 (89.2 bits), Expect = 7.0e-19, P = 7.0e-19
Identities = 78/296 (26%), Positives = 141/296 (47%)
Query: 27 PYRAPIFRF-KLFSKKIKARHAQNSVFESTDIPLPTFPFEE-YMIRKAEQVNKALD-EAV 83
P R+ ++ F KL S + H ++ S + +++ + + + + N D +
Sbjct: 5 PQRSSVWPFPKLCSIPWRFHHTSTALMCSCSKTVSDEKYQDPFQLGRKDLKNLYEDIKKE 64
Query: 84 VLQPPVKIHKAMRYSLLAGGKRVRPLLCIA---SCELVGGD--ESWAMPAACAL--EMIH 136
+L ++ + Y GK RP++ + +C + + E A + A+ EMIH
Sbjct: 65 LLVSTAELREMCEYYFDGKGKAFRPMIVVLMARACNIHHSNSREVQASQRSVAIIAEMIH 124
Query: 137 TMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRV 196
T SL+HDD+ +D+ RR K ++++GE A+LAGD +LS A ++ +A + +
Sbjct: 125 TASLVHDDV--IDDANSRRGKMTVNQIWGERKAVLAGDFILSAA----SLALARIGNTTI 178
Query: 197 VRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIH--VHKTAKLLEXXXXXXXXX 254
+ + ++ +E LV GEF+ + S+ + + + Y+ KTA L+
Sbjct: 179 ISVLTQV-----IEDLVRGEFLQLGSKENE-NERFAHYLEKTFKKTASLIANSCKAVSIL 232
Query: 255 XXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKL 310
E Y + +G+ FQ++DD+LD T ++ LGK A DL G AT P L
Sbjct: 233 GCPDPKVHEIAYQYGKNVGIAFQLIDDVLDFTSCADHLGKPAAADLKLGLATGPVL 288
>UNIPROTKB|F6RJN8 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051290 "protein heterotetramerization" evidence=IEA]
[GO:0050347 "trans-octaprenyltranstransferase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0051290 GeneTree:ENSGT00530000063378 GO:GO:0000010
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
OMA:QQFPELH EMBL:DAAA02035357 EMBL:DAAA02035358 EMBL:DAAA02035359
IPI:IPI00701533 UniGene:Bt.52184 ProteinModelPortal:F6RJN8
Ensembl:ENSBTAT00000008576 Uniprot:F6RJN8
Length = 418
Score = 240 (89.5 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 69/234 (29%), Positives = 114/234 (48%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIA---SCELVGGDES--WAMPAACAL--EMIHTMSLIH 142
++ + Y GK RP++ + +C + + A A AL EMIHT SL+H
Sbjct: 123 ELREMSEYHFDGKGKAFRPIIVVLMARACNIHHNNARNVQASQRAIALIAEMIHTASLVH 182
Query: 143 DDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAE 202
DD+ +D+ RR K ++++GE A+LAGD +LS A ++ +A + V+ + +
Sbjct: 183 DDI--IDDASSRRGKHTVNKIWGEKKAVLAGDLILSAA----SIALARIGNTTVISILTQ 236
Query: 203 MCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIH--VHKTAKLLEXXXXXXXXXXXXXXI 260
+ +E LV GEF+ + S+ + + + Y+ KTA L+
Sbjct: 237 V-----IEDLVRGEFLQLGSKENE-NERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPA 290
Query: 261 EVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIE 314
E Y + +G+ FQ++DD+LD T SE++GK DL G AT P L +
Sbjct: 291 VHEIAYQYGKNVGIAFQLIDDVLDFTSCSEQMGKPTSADLKLGLATGPVLFACQ 344
>UNIPROTKB|F1PV51 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051290 "protein heterotetramerization"
evidence=IEA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0051290 GeneTree:ENSGT00530000063378
GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0050347 OMA:QQFPELH EMBL:AAEX03001171
Ensembl:ENSCAFT00000006952 Uniprot:F1PV51
Length = 365
Score = 235 (87.8 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 66/221 (29%), Positives = 112/221 (50%)
Query: 103 GKRVRPLLCIA---SCELVGGD--ESWAMPAACAL--EMIHTMSLIHDDLPFLDNDERRR 155
GK RP++ + +C + + + A + AL EMIHT SL+HDD+ +D+ RR
Sbjct: 83 GKAFRPIIVVLMARACNIHHSNSRDVQASQRSIALIAEMIHTASLVHDDV--IDDASSRR 140
Query: 156 SKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAG 215
K ++++GE A+LAGD +LS A ++ +A + V+ + ++ +E LV G
Sbjct: 141 GKHTVNKIWGEKKAVLAGDLILSAA----SMALARIGNTTVISILTQV-----IEDLVRG 191
Query: 216 EFVDIASEGKDVSLKELEYIH--VHKTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCIG 273
EF+ + S+ + + + Y+ KTA L+ + E Y + +G
Sbjct: 192 EFLQLGSKENE-NERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVG 250
Query: 274 LLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIE 314
+ FQ++DD+LD T S+++GK DL G AT P L +
Sbjct: 251 IAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQ 291
>UNIPROTKB|Q5T2R2 [details] [associations]
symbol:PDSS1 "Decaprenyl-diphosphate synthase subunit 1"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IEA] [GO:0051290 "protein heterotetramerization"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006744
"ubiquinone biosynthetic process" evidence=IEA;IDA] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IDA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IDA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00232 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006744
EMBL:AL390961 GO:GO:0046982 GO:GO:0051290 eggNOG:COG0142
HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0050347 EMBL:AF118395 EMBL:AB210838
EMBL:AK223414 EMBL:BC049211 EMBL:BC063635 IPI:IPI00440542
IPI:IPI00456157 IPI:IPI00719538 RefSeq:NP_055132.2
UniGene:Hs.558468 ProteinModelPortal:Q5T2R2 SMR:Q5T2R2
STRING:Q5T2R2 PhosphoSite:Q5T2R2 DMDM:74744657 PaxDb:Q5T2R2
PRIDE:Q5T2R2 Ensembl:ENST00000376203 Ensembl:ENST00000376215
GeneID:23590 KEGG:hsa:23590 UCSC:uc001isv.3 UCSC:uc001isw.3
CTD:23590 GeneCards:GC10P026986 HGNC:HGNC:17759 HPA:HPA038032
MIM:607429 MIM:614651 neXtProt:NX_Q5T2R2 Orphanet:254898
PharmGKB:PA134982512 HOVERGEN:HBG054389 InParanoid:Q5T2R2 KO:K12504
OMA:QQFPELH OrthoDB:EOG4TQM94 BioCyc:MetaCyc:HS07530-MONOMER
BRENDA:2.5.1.11 GenomeRNAi:23590 NextBio:46232 ArrayExpress:Q5T2R2
Bgee:Q5T2R2 CleanEx:HS_PDSS1 Genevestigator:Q5T2R2
GermOnline:ENSG00000148459 Uniprot:Q5T2R2
Length = 415
Score = 237 (88.5 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 68/221 (30%), Positives = 110/221 (49%)
Query: 103 GKRVRPL---LCIASCELVGGDESW--AMPAACAL--EMIHTMSLIHDDLPFLDNDERRR 155
GK RP+ L +C + + A A AL EMIHT SL+HDD+ +D+ RR
Sbjct: 133 GKAFRPIIVALMARACNIHHNNSRHVQASQRAIALIAEMIHTASLVHDDV--IDDASSRR 190
Query: 156 SKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAG 215
K ++++GE A+LAGD +LS A ++ +A + V+ + ++ +E LV G
Sbjct: 191 GKHTVNKIWGEKKAVLAGDLILSAA----SIALARIGNTTVISILTQV-----IEDLVRG 241
Query: 216 EFVDIASEGKDVSLKELEYIH--VHKTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCIG 273
EF+ + S+ + + + Y+ KTA L+ + E Y + +G
Sbjct: 242 EFLQLGSKENE-NERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVG 300
Query: 274 LLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIE 314
+ FQ++DD+LD T S+++GK DL G AT P L +
Sbjct: 301 IAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQ 341
>ASPGD|ASPL0000038406 [details] [associations]
symbol:AN10340 species:162425 "Emericella nidulans"
[GO:0032476 "decaprenyl diphosphate synthase complex" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0016209 "antioxidant
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=IEA]
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0019418 "sulfide oxidation" evidence=IEA]
[GO:0070219 "cellular sulfide ion homeostasis" evidence=IEA]
[GO:0006744 "ubiquinone biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:BN001306
GO:GO:0006744 HOGENOM:HOG000009104 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 ProteinModelPortal:C8VJN5
EnsemblFungi:CADANIAT00010341 OMA:YLHKTYL Uniprot:C8VJN5
Length = 456
Score = 231 (86.4 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 80/240 (33%), Positives = 114/240 (47%)
Query: 120 GDESWAMPAACAL----EMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDA 175
GDE+ +P+ L E+IHT SL+HDD+ +DN RRS +++ FG A+LAGD
Sbjct: 188 GDEN-ILPSQRRLAEITELIHTASLLHDDV--IDNALTRRSSNSANIEFGNKMAVLAGDF 244
Query: 176 LLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKD----VSLKE 231
LL A +V +A + V +A + + LV GEF+ + + +D V +
Sbjct: 245 LLGRA----SVALARLRDPEVTELLATV-----IANLVEGEFMQLKNTAEDEKNPVFTDD 295
Query: 232 LEYIHVHKT----AKLLEXXXXXXXXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTK 287
++ KT A L+ VE +Y R +GL FQ+VDD+LD T
Sbjct: 296 TISYYLQKTYLKTASLISKSCRAAALLGHSTPDVVEAAYSYGRNLGLAFQLVDDMLDYTV 355
Query: 288 SSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLAN 347
S ELGK AG DL G AT P L + G L+G+ + KA L + AN
Sbjct: 356 SGVELGKPAGADLELGLATAPLLFAWKQHPEL-GPLVGRKFCREG--DVEKARELVYRAN 412
Score = 41 (19.5 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 91 IHKAMRYSLLAGGKRVRPLLCI 112
+ K +Y + GK +RPLL +
Sbjct: 106 LDKVAKYYTRSEGKHMRPLLVL 127
>UNIPROTKB|P31114 [details] [associations]
symbol:hepT "Heptaprenyl diphosphate synthase component 2"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0009234 "menaquinone biosynthetic process" evidence=IMP]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0030435
EMBL:AL009126 GenomeReviews:AL009126_GR EMBL:M80245
HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0016765 KO:K00805 GO:GO:0009234 PIR:E69630
RefSeq:NP_390155.1 ProteinModelPortal:P31114 SMR:P31114
DNASU:939002 EnsemblBacteria:EBBACT00000001536 GeneID:939002
KEGG:bsu:BSU22740 PATRIC:18976359 GenoList:BSU22740 OMA:KLYRFGY
ProtClustDB:CLSK873092 BioCyc:BSUB:BSU22740-MONOMER
BioCyc:MetaCyc:MONOMER-13770 InterPro:IPR014119 TIGRFAMs:TIGR02748
Uniprot:P31114
Length = 348
Score = 231 (86.4 bits), Expect = 6.5e-18, P = 6.5e-18
Identities = 77/269 (28%), Positives = 126/269 (46%)
Query: 53 ESTDIPLPTFPFE---EYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPL 109
E+TD+ + F+ ++ + + + L++ V P+ + +A + L AGGKR+RP+
Sbjct: 20 ENTDVWVNDMKFKMAYSFLNDDIDVIERELEQTVRSDYPL-LSEAGLHLLQAGGKRIRPV 78
Query: 110 LCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTA 169
+ S D + A LEMIH SL+HDD+ +D+ E RR KP + A
Sbjct: 79 FVLLSGMFGDYDINKIKYVAVTLEMIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRIA 136
Query: 170 ILAGDALLSLALEHVAVNIAGVSPDRVV-RAIAEMCSAMGVEGLVAGEFVDIASE-GKDV 227
+ GD +L+ +LE + I R++ + I E+C GE I + +
Sbjct: 137 MYTGDYMLAGSLE-MMTRINEPKAHRILSQTIVEVC---------LGEIEQIKDKYNMEQ 186
Query: 228 SLKE-LEYIHVHKTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVT 286
+L+ L I KTA L+ + + + +G+ +Q++DDILD T
Sbjct: 187 NLRTYLRRIK-RKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVGMSYQIIDDILDFT 245
Query: 287 KSSEELGKTAGKDLASGKATYPKLMGIEN 315
+ EELGK G DL G T P L ++N
Sbjct: 246 STEEELGKPVGGDLLQGNVTLPVLYALKN 274
>UNIPROTKB|Q5LX97 [details] [associations]
symbol:ddsA "Decaprenyl diphosphate synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0008834 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_165582.1 ProteinModelPortal:Q5LX97 GeneID:3194982
KEGG:sil:SPO0319 PATRIC:23373893 OMA:NDIRIIT ProtClustDB:CLSK933222
Uniprot:Q5LX97
Length = 332
Score = 228 (85.3 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 66/266 (24%), Positives = 120/266 (45%)
Query: 56 DIPLPTFPFEEYMIRKAEQ---VNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCI 112
D + T P E +++ VN + + + +I + + + AGGKR+RP+L +
Sbjct: 2 DAKVSTKPHEMLAATLSQEMAAVNALIRTRMASEHAPRIPEVTAHLVEAGGKRLRPMLTL 61
Query: 113 ASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILA 172
A+ L G + A +E IHT +L+HDD+ +D +RR +P ++ ++ +++L
Sbjct: 62 AAARLCGYQGEDHVKLAATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLV 119
Query: 173 GDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKEL 232
GD L + + + + V + RV+ +A + + GE + + + D+ E
Sbjct: 120 GDYLFARSFQ-LMVETGSL---RVLDILANAAAT-----IAEGEVLQMTA-ASDLRTDES 169
Query: 233 EYIHV--HKTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSE 290
Y+ V KTA L +V + Y +G+ FQ+ DD+LD ++
Sbjct: 170 VYLQVVRGKTAALFSAATEVGGVIAGVPEAQVRALFEYGDALGIAFQIADDLLDYQGDAK 229
Query: 291 ELGKTAGKDLASGKATYPKLMGIENA 316
GK G D K T P + + A
Sbjct: 230 ATGKNVGDDFRERKLTLPVIKAVAQA 255
>TIGR_CMR|SPO_0319 [details] [associations]
symbol:SPO_0319 "decaprenyl diphosphate synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0008834 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_165582.1 ProteinModelPortal:Q5LX97 GeneID:3194982
KEGG:sil:SPO0319 PATRIC:23373893 OMA:NDIRIIT ProtClustDB:CLSK933222
Uniprot:Q5LX97
Length = 332
Score = 228 (85.3 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 66/266 (24%), Positives = 120/266 (45%)
Query: 56 DIPLPTFPFEEYMIRKAEQ---VNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCI 112
D + T P E +++ VN + + + +I + + + AGGKR+RP+L +
Sbjct: 2 DAKVSTKPHEMLAATLSQEMAAVNALIRTRMASEHAPRIPEVTAHLVEAGGKRLRPMLTL 61
Query: 113 ASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILA 172
A+ L G + A +E IHT +L+HDD+ +D +RR +P ++ ++ +++L
Sbjct: 62 AAARLCGYQGEDHVKLAATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLV 119
Query: 173 GDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKEL 232
GD L + + + + V + RV+ +A + + GE + + + D+ E
Sbjct: 120 GDYLFARSFQ-LMVETGSL---RVLDILANAAAT-----IAEGEVLQMTA-ASDLRTDES 169
Query: 233 EYIHV--HKTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSE 290
Y+ V KTA L +V + Y +G+ FQ+ DD+LD ++
Sbjct: 170 VYLQVVRGKTAALFSAATEVGGVIAGVPEAQVRALFEYGDALGIAFQIADDLLDYQGDAK 229
Query: 291 ELGKTAGKDLASGKATYPKLMGIENA 316
GK G D K T P + + A
Sbjct: 230 ATGKNVGDDFRERKLTLPVIKAVAQA 255
>UNIPROTKB|F1RTW8 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016740 "transferase activity" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GeneTree:ENSGT00530000063378 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 OMA:QQFPELH EMBL:CU571224
Ensembl:ENSSSCT00000012105 Uniprot:F1RTW8
Length = 410
Score = 233 (87.1 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 66/221 (29%), Positives = 110/221 (49%)
Query: 103 GKRVRPLLCIA---SCELVGGD--ESWAMPAACAL--EMIHTMSLIHDDLPFLDNDERRR 155
GK RP++ + +C + + + A AL EMIHT SL+HDD+ +D+ RR
Sbjct: 128 GKAFRPIIVVLMARACNIHHNNSRDMQASQRTIALIAEMIHTASLVHDDV--IDDASSRR 185
Query: 156 SKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAG 215
K ++++GE A+LAGD +LS A ++ +A + V+ + ++ +E LV G
Sbjct: 186 GKHTVNKIWGEKKAVLAGDLILSAA----SIALARIGNTTVISILTQV-----IEDLVRG 236
Query: 216 EFVDIASEGKDVSLKELEYIH--VHKTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCIG 273
EF+ + S+ + + + Y+ KTA L+ E Y + +G
Sbjct: 237 EFLQLGSKENE-NERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPAVHEIAYQYGKNVG 295
Query: 274 LLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIE 314
+ FQ++DD+LD T S+++GK DL G AT P L +
Sbjct: 296 IAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQ 336
>TIGR_CMR|BA_1535 [details] [associations]
symbol:BA_1535 "heptaprenyl diphosphate synthase component
II" species:198094 "Bacillus anthracis str. Ames" [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=ISS]
[GO:0009234 "menaquinone biosynthetic process" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879
EMBL:AE017334 GenomeReviews:AE016879_GR GenomeReviews:AE017334_GR
HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K00805 OMA:KLYRFGY ProtClustDB:CLSK873092
InterPro:IPR014119 TIGRFAMs:TIGR02748 RefSeq:NP_843986.1
RefSeq:YP_018158.1 ProteinModelPortal:Q81SV9 DNASU:1087064
EnsemblBacteria:EBBACT00000008063 EnsemblBacteria:EBBACT00000013944
GeneID:1087064 GeneID:2816030 KEGG:ban:BA_1535 KEGG:bar:GBAA_1535
PATRIC:18780664 BioCyc:BANT261594:GJ7F-1560-MONOMER Uniprot:Q81SV9
Length = 320
Score = 223 (83.6 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 75/246 (30%), Positives = 116/246 (47%)
Query: 75 VNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW-AMP-AACAL 132
+ K L + V + P+ + +A + AGGKR+RP+ + + + GD A+ A AL
Sbjct: 17 IEKELKKTVASEQPL-VEEAALQLIEAGGKRIRPVFVLLAGKF--GDYKLDAIKHVAVAL 73
Query: 133 EMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVS 192
E+IH SL+HDD+ +D RR + +G+ A+ GD L + +LE + NI
Sbjct: 74 ELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECIT-NIEIPE 130
Query: 193 PDRVV-RAIAEMCSAMGVEGLVAGEFVDIASE-GKDVSLKE-LEYIHVHKTAKLLEXXXX 249
+ + I E+C GE I + D +L+ L I KTA L+
Sbjct: 131 AHQALSHTILEVCK---------GEIEQIKDKYNYDQNLRTYLRRIK-RKTALLIAASCQ 180
Query: 250 XXXXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPK 309
V R+ Y +G+ +Q++DDILD + E+LGK AG DL G T P
Sbjct: 181 LGAIAAGANRDTVSRLFWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPA 240
Query: 310 LMGIEN 315
L +E+
Sbjct: 241 LYAMED 246
>FB|FBgn0051005 [details] [associations]
symbol:qless "qless" species:7227 "Drosophila melanogaster"
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0033554 "cellular response to stress"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0014019 "neuroblast development"
evidence=IMP] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 EMBL:AE014297 GO:GO:0043066 GO:GO:0033554
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0014019
GeneTree:ENSGT00530000063378 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K12504 OMA:KPSVNAL
FlyBase:FBgn0051005 EMBL:BT044087 RefSeq:NP_733425.1
UniGene:Dm.5492 SMR:Q9V9Z3 IntAct:Q9V9Z3 MINT:MINT-1009288
STRING:Q9V9Z3 EnsemblMetazoa:FBtr0085769 GeneID:43697
KEGG:dme:Dmel_CG31005 UCSC:CG31005-RA CTD:43697 InParanoid:Q9V9Z3
GenomeRNAi:43697 NextBio:835306 Uniprot:Q9V9Z3
Length = 436
Score = 224 (83.9 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 83/311 (26%), Positives = 140/311 (45%)
Query: 22 DFKKSPYRAPIFRFKLFSKKIKARHAQNSVFESTDI--PLPTFPFEEYMIRKAEQVNKAL 79
D +SP++ + +S+ KA Q+S + P+ F + Y+I + +
Sbjct: 69 DLLQSPHKCS--QSLQYSQSSKANLRQHSSVHTQQPAGPVREFQIDPYIILD-DDLKYFY 125
Query: 80 DEAVVL------QPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG---GDESWAM---- 126
D+ L QP ++ Y GK +RP++ + + + +ES +
Sbjct: 126 DDVRYLLKSGTSQP--ELDTIASYYFDGQGKALRPMVTMLMAKAINYHLNNESHQLVHKQ 183
Query: 127 -PAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVA 185
A EM+H+ SL+HDD+ +D + RR KP+ + ++ +AGD +LS+A +
Sbjct: 184 RQIALFSEMVHSASLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYILSIA----S 237
Query: 186 VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIH--VHKTAKL 243
+ IA + D V ++++ + LV GEF+ + S + + + Y+ KTA L
Sbjct: 238 IMIARLRSDDVTIVLSQILT-----DLVQGEFMQLGSRETE-NERFAHYLTKTYRKTASL 291
Query: 244 LEXXXXXXXXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASG 303
+ E Y R IGL FQ+VDD+LD S+E++GK DL G
Sbjct: 292 IANALKATAVIAQADDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTEQMGKPTAADLKLG 351
Query: 304 KATYPKLMGIE 314
AT P L E
Sbjct: 352 LATAPVLFACE 362
>SGD|S000000207 [details] [associations]
symbol:COQ1 "Hexaprenyl pyrophosphate synthetase"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IEA;IMP;IDA] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IEA;IMP] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0000010 "trans-hexaprenyltranstransferase
activity" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00232 SGD:S000000207
GO:GO:0005739 GO:GO:0005743 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 EMBL:BK006936 GO:GO:0006744
EMBL:J05547 EMBL:Z35872 EMBL:AY558099 EMBL:Z26494 PIR:A36625
RefSeq:NP_009557.1 ProteinModelPortal:P18900 SMR:P18900
DIP:DIP-1103N IntAct:P18900 MINT:MINT-427151 STRING:P18900
PaxDb:P18900 PRIDE:P18900 EnsemblFungi:YBR003W GeneID:852288
KEGG:sce:YBR003W CYGD:YBR003w eggNOG:COG0142
GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104 KO:K05355
OMA:RASSIFA OrthoDB:EOG4HB1V2 BioCyc:MetaCyc:MONOMER-13702
BRENDA:2.5.1.33 NextBio:970928 Genevestigator:P18900
GermOnline:YBR003W GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 Uniprot:P18900
Length = 473
Score = 137 (53.3 bits), Expect = 6.7e-16, Sum P(3) = 6.7e-16
Identities = 35/105 (33%), Positives = 56/105 (53%)
Query: 132 LEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGV 191
+EMIHT SL+HDD+ +D+ + RR +P+ + F A+LAGD LL A V+I+ +
Sbjct: 182 VEMIHTASLLHDDV--IDHSDTRRGRPSGNAAFTNKMAVLAGDFLLGRA----TVSISRL 235
Query: 192 SPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIH 236
VV ++ + LV GEF+ + + D + +E H
Sbjct: 236 HNPEVVELMSN-----SIANLVEGEFMQLKNTSIDADIDTIENGH 275
Score = 125 (49.1 bits), Expect = 6.7e-16, Sum P(3) = 6.7e-16
Identities = 33/99 (33%), Positives = 48/99 (48%)
Query: 234 YIHVH--KTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSEE 291
YIH KTA L+ ++ ++ R +G+ FQ+VDD+LD T S ++
Sbjct: 316 YIHKTYLKTAALISKSCRCAAILSGASPAVIDECYDFGRNLGICFQLVDDMLDFTVSGKD 375
Query: 292 LGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEE 330
LGK +G DL G AT P L + S G L+ + E
Sbjct: 376 LGKPSGADLKLGIATAPVLFAWKEDPSL-GPLISRNFSE 413
Score = 46 (21.3 bits), Expect = 6.7e-16, Sum P(3) = 6.7e-16
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCI 112
PV ++K Y GK+VRPLL +
Sbjct: 69 PV-LNKVTSYYFETEGKKVRPLLVL 92
>POMBASE|SPBPJ4664.01 [details] [associations]
symbol:dps1 "decaprenyl diphosphate synthase subunit
Dps1" species:4896 "Schizosaccharomyces pombe" [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IC] [GO:0006119 "oxidative phosphorylation"
evidence=TAS] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0016209 "antioxidant activity" evidence=IMP]
[GO:0019418 "sulfide oxidation" evidence=IMP] [GO:0019646 "aerobic
electron transport chain" evidence=TAS] [GO:0032476 "decaprenyl
diphosphate synthase complex" evidence=IPI] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IPI] [GO:0070219 "cellular sulfide ion
homeostasis" evidence=IMP] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=IMP]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00232 PomBase:SPBPJ4664.01 GO:GO:0005743
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0016740 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016209
GO:GO:0019646 GO:GO:0070219 GO:GO:0006119 GO:GO:0019418
GO:GO:0006744 eggNOG:COG0142 HOGENOM:HOG000009104 KO:K05355
OrthoDB:EOG4HB1V2 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0032476 EMBL:D84311 EMBL:D89265 PIR:JC5429
PIR:T43193 RefSeq:NP_595276.1 ProteinModelPortal:O43091
STRING:O43091 EnsemblFungi:SPBPJ4664.01.1 GeneID:2541402
KEGG:spo:SPBPJ4664.01 OMA:KPSVNAL NextBio:20802509 Uniprot:O43091
Length = 378
Score = 212 (79.7 bits), Expect = 7.5e-16, Sum P(2) = 7.5e-16
Identities = 61/185 (32%), Positives = 90/185 (48%)
Query: 133 EMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVS 192
EMIH SL+HDD+ +D+ RR P+S+ FG +ILAG+ +L+ A + +A +
Sbjct: 127 EMIHIASLLHDDV--IDHANVRRGSPSSNVAFGNRRSILAGNFILARA----STAMARLR 180
Query: 193 PDRVVRAIAEMCSAMGVEGLVAGEFVDIAS--EGKDVSLKELE---YIHVH--KTAKLLE 245
+V +A + + LV GEF+ + + + + +K+ YI KTA L+
Sbjct: 181 NPQVTELLATV-----IADLVRGEFLQLKNTMDPSSLEIKQSNFDYYIEKSFLKTASLIS 235
Query: 246 XXXXXXXXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKA 305
Y RCIG FQ++DD+LD T + LGK AG DL G A
Sbjct: 236 KSCKASTILGQCSPTVATAAGEYGRCIGTAFQLMDDVLDYTSKDDTLGKAAGADLKLGLA 295
Query: 306 TYPKL 310
T P L
Sbjct: 296 TAPVL 300
Score = 40 (19.1 bits), Expect = 7.5e-16, Sum P(2) = 7.5e-16
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 91 IHKAMRYSLLAGGKRVRPLLCI 112
+ + +Y +A GK++RP L +
Sbjct: 59 LEECSKYYTIAQGKQMRPSLVL 80
>DICTYBASE|DDB_G0280293 [details] [associations]
symbol:coq1 "trans-prenyltransferase" species:44689
"Dictyostelium discoideum" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0006743 "ubiquinone metabolic process"
evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISS] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00232
dictyBase:DDB_G0280293 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GenomeReviews:CM000152_GR
GO:GO:0046872 EMBL:AAFI02000035 GO:GO:0006744 eggNOG:COG0142
GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0006743 RefSeq:XP_641356.1 HSSP:Q9WY08
ProteinModelPortal:Q54VJ9 STRING:Q54VJ9 EnsemblProtists:DDB0231590
GeneID:8622490 KEGG:ddi:DDB_G0280293 OMA:RIRPTIV Uniprot:Q54VJ9
Length = 456
Score = 218 (81.8 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 73/239 (30%), Positives = 112/239 (46%)
Query: 103 GKRVRP-LLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASH 161
GKR+RP ++ + S L + A +EMIHT SL+HDD+ +D RR + +
Sbjct: 182 GKRIRPTIVLLLSKALSSTVHGSQLKLAEIVEMIHTASLVHDDV--IDEASTRRDVISIN 239
Query: 162 EVFGESTAILAGDALLSLALEHVAVNIAGV-SPDRVVRAIAEMCSAMGVEGLVAGEFVDI 220
+ AIL GD LL+ A +V ++ + +PD + E C + + LV GEF+
Sbjct: 240 HSYTNKLAILCGDYLLARA----SVVLSTIRNPD-----VTE-CMSTALAELVEGEFMQA 289
Query: 221 ASEGKDVSLKE-LEYIHVHKTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCIGLLFQVV 279
S G VS L+ ++ KT L+ + + + +GL FQ+V
Sbjct: 290 KSNGV-VSFDNYLQKTYL-KTGSLITNSCRSAAILSGADSNIINISTEFGKNLGLAFQIV 347
Query: 280 DDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASK 338
DD+LD T S+EE GK DL G AT P L + +L+ + E+ E +K
Sbjct: 348 DDLLDYTGSAEECGKATSVDLTLGLATAPVLYATQEFPQLE-KLIKRKFSEIGDVEEAK 405
>TIGR_CMR|CJE_0645 [details] [associations]
symbol:CJE_0645 "polyprenyl synthetase family protein"
species:195099 "Campylobacter jejuni RM1221" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000025
GenomeReviews:CP000025_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_178660.1 ProteinModelPortal:Q5HVM5 STRING:Q5HVM5
GeneID:3232032 KEGG:cjr:CJE0645 PATRIC:20043010 OMA:DIQDESE
ProtClustDB:CLSK872307 BioCyc:CJEJ195099:GJC0-660-MONOMER
Uniprot:Q5HVM5
Length = 297
Score = 206 (77.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 70/222 (31%), Positives = 104/222 (46%)
Query: 98 SLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSK 157
S + GK++R L + + + A A+E+IH SL+HDD+ +D E RR
Sbjct: 25 SNVKSGKKLRSKLLLT----IADESEIAFKICAAIELIHLASLLHDDI--IDESELRRGA 78
Query: 158 PASHEVFGESTAILAGDALLSLA---LEHVAVNIAGVSPDRVVR-AIAEMCSAMGVEGLV 213
+ + FG A++ GD L S A L + A + D VV+ AI E+ M V+
Sbjct: 79 RSVNAEFGTKNALMLGDILYSKAFYELSKMDARFASIISDAVVKLAIGEL---MDVD--- 132
Query: 214 AGEFVDIASEGKDVSLKELEYIHVHKTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCIG 273
GE +I K+ LK + Y +KTA L+E + + Y + +G
Sbjct: 133 LGEKFNI---NKEAYLKMI-Y---NKTAVLIEASARCGAILAG---LYEKDFAEYGKNLG 182
Query: 274 LLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIEN 315
L FQ++DDILD+ + LGK A D GK T P + EN
Sbjct: 183 LAFQMIDDILDIKSDEKILGKPAMNDFKEGKTTLPYIYLYEN 224
>CGD|CAL0005672 [details] [associations]
symbol:orf19.7478 species:5476 "Candida albicans" [GO:0032476
"decaprenyl diphosphate synthase complex" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019418 "sulfide oxidation"
evidence=IEA] [GO:0070219 "cellular sulfide ion homeostasis"
evidence=IEA] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IEA] [GO:0016209 "antioxidant activity" evidence=IEA]
[GO:0008834 "di-trans,poly-cis-decaprenylcistransferase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0000010 "trans-hexaprenyltranstransferase
activity" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 CGD:CAL0005672 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 eggNOG:COG0142
KO:K05355 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
EMBL:AACQ01000039 RefSeq:XP_718635.1 ProteinModelPortal:Q5AAL1
STRING:Q5AAL1 GeneID:3639664 KEGG:cal:CaO19.7478 Uniprot:Q5AAL1
Length = 510
Score = 121 (47.7 bits), Expect = 4.2e-15, Sum P(3) = 4.2e-15
Identities = 34/89 (38%), Positives = 50/89 (56%)
Query: 132 LEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGV 191
+EMIHT SL+HDD+ +D + RR +P+ + F A+LAGD LL A +V IA +
Sbjct: 204 VEMIHTASLLHDDV--IDLSDSRRGRPSGNIAFTNKMAVLAGDFLLGRA----SVAIARL 257
Query: 192 SPDRVVRAIAEMCSAMGVEGLVAGEFVDI 220
V+ E+ S + LV GEF+ +
Sbjct: 258 RNPEVI----ELLSTT-IANLVEGEFMQL 281
Score = 119 (46.9 bits), Expect = 4.2e-15, Sum P(3) = 4.2e-15
Identities = 32/109 (29%), Positives = 49/109 (44%)
Query: 234 YIHVH--KTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSEE 291
Y+H KTA L+ +E + R +GL FQ+VDD+LD T S +
Sbjct: 354 YLHKTYLKTASLMSKSCRAAAVLSGAQDDIIENCYQFGRNLGLCFQIVDDMLDYTSSDKT 413
Query: 292 LGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAA 340
+GK + DL G AT P L + G+L+ + + E ++ A
Sbjct: 414 IGKPSQADLKLGLATAPILFAWKQEPKL-GDLIARKFNQPGDVEIARRA 461
Score = 64 (27.6 bits), Expect = 4.2e-15, Sum P(3) = 4.2e-15
Identities = 23/85 (27%), Positives = 42/85 (49%)
Query: 37 LFSKKIKARHAQNSVF----ESTD--IPLPTFPFEE-YMIRKAEQVN--KALDEAVVLQP 87
L +++I++RH +S F E+ + + PT F + + I E N K++ +
Sbjct: 14 LLTRRIRSRHHSSSTFKTAVETAEKLVTPPTSKFSDPFSIVSHEMSNLAKSIANLIGSGH 73
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCI 112
P +++ Y A GK VRPL+ +
Sbjct: 74 PT-LNRVSSYYFEAEGKNVRPLIVL 97
Score = 48 (22.0 bits), Expect = 6.5e-08, Sum P(3) = 6.5e-08
Identities = 15/57 (26%), Positives = 24/57 (42%)
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKA-APLYFLANYIASRQN 354
D+ + K G+ K A QA++ L S+A + L L N + +R N
Sbjct: 454 DVEIARRAVEKYDGVAQTKEMATMYCHQALKNLRVLPESEARSALELLTNSVLTRTN 510
>WB|WBGene00000761 [details] [associations]
symbol:coq-1 species:6239 "Caenorhabditis elegans"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IMP] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 GO:GO:0008340 GO:GO:0018991 GO:GO:0040010
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GO:GO:0040011 GO:GO:0040017 GO:GO:0006744 eggNOG:COG0142
GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K12504 EMBL:FO080645
PIR:G87775 PIR:T25573 RefSeq:NP_491588.1 ProteinModelPortal:P91093
SMR:P91093 STRING:P91093 PaxDb:P91093 EnsemblMetazoa:C24A11.9
GeneID:172190 KEGG:cel:CELE_C24A11.9 UCSC:C24A11.9 CTD:172190
WormBase:C24A11.9 InParanoid:P91093 OMA:PNRNEST NextBio:874409
Uniprot:P91093
Length = 393
Score = 208 (78.3 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 55/187 (29%), Positives = 93/187 (49%)
Query: 133 EMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVS 192
EMIHT SL+HDD+ +D RR + + V+G ++L GD +L+ A + + +
Sbjct: 143 EMIHTASLVHDDV--IDEANTRRGSASVNAVWGNKMSVLVGDFILARATQI----LCSIG 196
Query: 193 PDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVS-LKELE-YIH-VH-KTAKLLEXXX 248
++ +A + +E LV GEF+ +++ D + + ++ YI H KTA L
Sbjct: 197 KPNIISVMASI-----IEDLVLGEFMQMSTTPTDATPVDRMKAYIEKTHRKTASLFASSC 251
Query: 249 XXXXXXXXXXXIEVERVR-NYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATY 307
+++ + Y R +G+ FQ+ DD+LD +++E+GK DL G AT
Sbjct: 252 RSAAILADGSDLKLHEIAFEYGRNLGIAFQLADDLLDFIATADEMGKPVAADLKLGLATA 311
Query: 308 PKLMGIE 314
P L E
Sbjct: 312 PVLYACE 318
>TAIR|locus:2062315 [details] [associations]
symbol:GPS1 "geranyl diphosphate synthase 1" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0004161 "dimethylallyltranstransferase activity"
evidence=IGI;IDA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0009536 "plastid" evidence=IDA] [GO:0009790 "embryo
development" evidence=IMP] [GO:0004659 "prenyltransferase activity"
evidence=IDA] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IMP] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005739 GO:GO:0009507
EMBL:CP002685 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0006744 GO:GO:0009790 EMBL:AC004077
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347 GO:GO:0004659
OMA:KPSVNAL GO:GO:0052924 EMBL:Y17376 EMBL:AY093006 EMBL:BT020524
IPI:IPI00537358 IPI:IPI00538487 IPI:IPI00657038 PIR:A84759
RefSeq:NP_001031483.1 RefSeq:NP_850234.1 UniGene:At.25503 PDB:3APZ
PDB:3AQ0 PDBsum:3APZ PDBsum:3AQ0 ProteinModelPortal:Q5HZ00
SMR:Q5HZ00 STRING:Q5HZ00 PRIDE:Q5HZ00 EnsemblPlants:AT2G34630.2
GeneID:818028 KEGG:ath:AT2G34630 TAIR:At2g34630 InParanoid:Q8RWM1
KO:K14066 ProtClustDB:PLN02890 EvolutionaryTrace:Q9FT89
Genevestigator:Q5HZ00 Uniprot:Q5HZ00
Length = 422
Score = 199 (75.1 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 62/183 (33%), Positives = 86/183 (46%)
Query: 133 EMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVS 192
EMIH SL+HDD+ LD+ + RR + + V G ++LAGD LLS A +A +
Sbjct: 171 EMIHVASLLHDDV--LDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGA----LAALK 224
Query: 193 PDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKD-VSLKELEYIHVHKTAKLLEXXXXXX 251
VV +A VE LV GE ++I S + S+ +KTA L+
Sbjct: 225 NTEVVALLAT-----AVEHLVTGETMEITSSTEQRYSMDYYMQKTYYKTASLISNSCKAV 279
Query: 252 XXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLM 311
Y R +GL FQ++DDILD T +S LGK + D+ G T P L
Sbjct: 280 AVLTGQTAEVAVLAFEYGRNLGLAFQLIDDILDFTGTSASLGKGSLSDIRHGVITAPILF 339
Query: 312 GIE 314
+E
Sbjct: 340 AME 342
>UNIPROTKB|H0YEE6 [details] [associations]
symbol:PDSS1 "Decaprenyl-diphosphate synthase subunit 1"
species:9606 "Homo sapiens" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
EMBL:AL390961 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HGNC:HGNC:17759 Ensembl:ENST00000491711 Uniprot:H0YEE6
Length = 158
Score = 162 (62.1 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 44/153 (28%), Positives = 75/153 (49%)
Query: 164 FGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASE 223
+GE A+LAGD +LS A ++ +A + V+ + ++ +E LV GEF+ + S+
Sbjct: 2 WGEKKAVLAGDLILSAA----SIALARIGNTTVISILTQV-----IEDLVRGEFLQLGSK 52
Query: 224 GKDVSLKELEYIH--VHKTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCIGLLFQVVDD 281
+ + + Y+ KTA L+ + E Y + +G+ FQ++DD
Sbjct: 53 ENE-NERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGIAFQLIDD 111
Query: 282 ILDVTKSSEELGKTAGKDLASGKATYPKLMGIE 314
+LD T S+++GK DL G AT P L +
Sbjct: 112 VLDFTSCSDQMGKPTSADLKLGLATGPVLFACQ 144
>GENEDB_PFALCIPARUM|PFB0130w [details] [associations]
symbol:PFB0130w "polyprenyl synthetase,
putative" species:5833 "Plasmodium falciparum" [GO:0004659
"prenyltransferase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE001362
GenomeReviews:AE001362_GR OMA:RASSIFA GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004659 PIR:F71622
RefSeq:XP_001349541.1 ProteinModelPortal:O96130
EnsemblProtists:PFB0130w:mRNA GeneID:812623 KEGG:pfa:PFB0130w
EuPathDB:PlasmoDB:PF3D7_0202700 HOGENOM:HOG000284224
ProtClustDB:CLSZ2432854 Uniprot:O96130
Length = 538
Score = 172 (65.6 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 61/226 (26%), Positives = 102/226 (45%)
Query: 131 ALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAG 190
A E+IH SL+HDD+ +D+ +RR A H+ FG +IL+GD LL+ A + AG
Sbjct: 272 ASEIIHMGSLLHDDV--IDDSNKRRGVIALHKKFGNKISILSGDYLLARA----SSIFAG 325
Query: 191 VSPDRVVRAIAEMCSAMGVEGLVAGEFV--DIASEGKDVSLKELEYIHVHKTAKLLEXXX 248
++ R+ + + VE L+ GEF+ ++ + +LK HKTA L
Sbjct: 326 TGSPKICRSFSYV-----VESLIKGEFLQRNLKFNNVEEALKMYLIKSYHKTASLFSHLF 380
Query: 249 XXXXXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYP 308
++ N IG+ FQ+ DD LD K + K DL + T P
Sbjct: 381 ACIAILSFKNDTIIQLCFNLGLHIGMAFQLYDDYLDY-KIDDNTNKPILNDLKNNIKTAP 439
Query: 309 KLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L ++ +++ Q I + +Y LY++ + + ++N
Sbjct: 440 LLFSY----NYNPQVILQLINKNSYTNNDIENILYYIQHSNSMKKN 481
>UNIPROTKB|O96130 [details] [associations]
symbol:OPP "Octaprenyl pyrophosphate synthase"
species:36329 "Plasmodium falciparum 3D7" [GO:0004659
"prenyltransferase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE001362
GenomeReviews:AE001362_GR OMA:RASSIFA GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004659 PIR:F71622
RefSeq:XP_001349541.1 ProteinModelPortal:O96130
EnsemblProtists:PFB0130w:mRNA GeneID:812623 KEGG:pfa:PFB0130w
EuPathDB:PlasmoDB:PF3D7_0202700 HOGENOM:HOG000284224
ProtClustDB:CLSZ2432854 Uniprot:O96130
Length = 538
Score = 172 (65.6 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 61/226 (26%), Positives = 102/226 (45%)
Query: 131 ALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAG 190
A E+IH SL+HDD+ +D+ +RR A H+ FG +IL+GD LL+ A + AG
Sbjct: 272 ASEIIHMGSLLHDDV--IDDSNKRRGVIALHKKFGNKISILSGDYLLARA----SSIFAG 325
Query: 191 VSPDRVVRAIAEMCSAMGVEGLVAGEFV--DIASEGKDVSLKELEYIHVHKTAKLLEXXX 248
++ R+ + + VE L+ GEF+ ++ + +LK HKTA L
Sbjct: 326 TGSPKICRSFSYV-----VESLIKGEFLQRNLKFNNVEEALKMYLIKSYHKTASLFSHLF 380
Query: 249 XXXXXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYP 308
++ N IG+ FQ+ DD LD K + K DL + T P
Sbjct: 381 ACIAILSFKNDTIIQLCFNLGLHIGMAFQLYDDYLDY-KIDDNTNKPILNDLKNNIKTAP 439
Query: 309 KLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L ++ +++ Q I + +Y LY++ + + ++N
Sbjct: 440 LLFSY----NYNPQVILQLINKNSYTNNDIENILYYIQHSNSMKKN 481
>WB|WBGene00011058 [details] [associations]
symbol:fdps-1 species:6239 "Caenorhabditis elegans"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00723
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 GO:GO:0000003
eggNOG:COG0142 GO:GO:0008299 HOGENOM:HOG000160912 KO:K00787
GeneTree:ENSGT00530000064127 HSSP:P08836 OMA:DIQENKC EMBL:Z81106
PIR:D87933 PIR:T23962 RefSeq:NP_493027.1 ProteinModelPortal:O62336
SMR:O62336 STRING:O62336 PaxDb:O62336 EnsemblMetazoa:R06C1.2
GeneID:173075 KEGG:cel:CELE_R06C1.2 UCSC:R06C1.2 CTD:173075
WormBase:R06C1.2 InParanoid:O62336 NextBio:878175 Uniprot:O62336
Length = 352
Score = 133 (51.9 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 63/241 (26%), Positives = 100/241 (41%)
Query: 102 GGKRVRPLLCIASCELVGG---DESWAMPAAC----ALEMIHTMSLIHDDLPFLDNDERR 154
GGK R LC+ + + DE+ + A C LE+I + LI DD+ +DN E R
Sbjct: 51 GGKYSRASLCVDTIRALQPHLRDETQELQAVCEAAATLEIIQSFYLIADDI--MDNSETR 108
Query: 155 RSKPASHEVFGESTAILAGDALL--SLALEHVAVNIAG-VSPDRVVRAIAEMCSAMGVEG 211
R KP G + + DA + S + + + + G V+ DR+ A + +
Sbjct: 109 RGKPCWFRREGVGMSAI-NDAFIMDSFVEDILRLALPGHVNLDRLCEAYRK-----SKQK 162
Query: 212 LVAGEFVDIASEGKDVSLK--ELEYIHVHKTAKLLEXXXXXXXXXXXXXXIEVERVRNYA 269
+ G+F+D +S + S E + +KT+ V+ A
Sbjct: 163 TLIGQFLDTSSVNQISSFTWDRYELMVENKTSHYTVFHPIQMALIISDVLAYHGSVKKVA 222
Query: 270 RCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIE 329
IG LFQ DD LDV + GK G D+ GK T+ + ++ + + IE
Sbjct: 223 YQIGFLFQSQDDFLDVYGDPKITGKI-GTDIQDGKCTWLAVRALQKMHKTPEKWGAKLIE 281
Query: 330 E 330
E
Sbjct: 282 E 282
>DICTYBASE|DDB_G0293588 [details] [associations]
symbol:ggps1 "geranylgeranyl diphosphate synthase 1"
species:44689 "Dictyostelium discoideum" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0004337
"geranyltranstransferase activity" evidence=IEA;ISS] [GO:0004311
"farnesyltranstransferase activity" evidence=IEA;ISS] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0045337 "farnesyl
diphosphate biosynthetic process" evidence=IEA] [GO:0033386
"geranylgeranyl diphosphate biosynthetic process" evidence=IEA]
[GO:0033384 "geranyl diphosphate biosynthetic process"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 dictyBase:DDB_G0293588 GO:GO:0005737
GenomeReviews:CM000155_GR Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 EMBL:AAFI02000218 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K00804
OMA:MLAIRLM RefSeq:XP_629028.1 HSSP:O95749
ProteinModelPortal:Q54BK1 SMR:Q54BK1 STRING:Q54BK1
EnsemblProtists:DDB0233098 GeneID:8629314 KEGG:ddi:DDB_G0293588
ProtClustDB:CLSZ2429239 Uniprot:Q54BK1
Length = 303
Score = 131 (51.2 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 59/239 (24%), Positives = 103/239 (43%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIASCE--LVGGDESWAMPAACALEMIHTMSLIHDDLPF 147
K+ + Y + GK R L I S + L GDE + ++ +H SL+ DD+
Sbjct: 18 KLIEPYTYICESSGKGFRNAL-IKSFDYWLKVGDEK-VQDISKVIQGLHGASLLIDDIE- 74
Query: 148 LDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAM 207
DN + RR KP +H ++G I + + + L ++ N G P I E+
Sbjct: 75 -DNSKLRRGKPVAHSIYGIPQTINSANFVYFLIMDQC--NKLG-DPKATTIFIEELIR-- 128
Query: 208 GVEGLVAGEFVDIASEGKDVSLKELEYIHV--HKTAKLLEXXXXXXXXXXXXXXIEVERV 265
L G+ DI + S E EY+++ KT L ++ V
Sbjct: 129 ----LHRGQGYDIFWRDTNTSPSEQEYMNMVNEKTGGLFRLGLRLLQAFSDNNTNYIDLV 184
Query: 266 RNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELL 324
+ +G+ +Q+ DD++++ + K+ +D++ GK ++P + I NA S LL
Sbjct: 185 ED----LGMYYQIRDDLINLVSVDYQQNKSFCEDISEGKFSFPIIHAI-NADSNDNRLL 238
>ZFIN|ZDB-GENE-030131-8742 [details] [associations]
symbol:ggps1 "geranylgeranyl diphosphate synthase
1" species:7955 "Danio rerio" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 ZFIN:ZDB-GENE-030131-8742 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GeneTree:ENSGT00390000010417
EMBL:CU639409 EMBL:CU914439 EMBL:FP017283 IPI:IPI00481673
Ensembl:ENSDART00000097845 ArrayExpress:F1QX12 Bgee:F1QX12
Uniprot:F1QX12
Length = 350
Score = 103 (41.3 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 39/151 (25%), Positives = 69/151 (45%)
Query: 62 FPF-EEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
F F + ++ R ++ +A E ++L+P +Y L GK+VR L A +
Sbjct: 31 FSFWKVWIYRGMDEKQRATSERILLEP-------YKYLLQLPGKQVRTKLSQAFNHWLNV 83
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
E EM+H SL+ DD+ D+ + RR P +H ++G + I + + + L
Sbjct: 84 PEDKLQVIIEVTEMLHNASLLIDDIE--DSSKLRRGFPVAHSIYGIPSVINSANYVYFLG 141
Query: 181 LEHVAVNIAGVSPDRV-VRAIAEMCSAMGVE 210
LE V + + RV R + E+ G++
Sbjct: 142 LEKVLM-LEHPEAVRVFTRQLLELHRGQGLD 171
Score = 66 (28.3 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 272 IGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGI 313
+GL FQ+ DD ++ K+ +DL GK ++P + I
Sbjct: 222 LGLYFQIRDDYANLNSKEYSANKSFCEDLTEGKFSFPTIHAI 263
>ASPGD|ASPL0000044272 [details] [associations]
symbol:AN1592 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0019748 "secondary
metabolic process" evidence=IEP;IGC] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:BN001307
EMBL:AACD01000025 eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000169461 OrthoDB:EOG4QVGMM
RefSeq:XP_659196.1 ProteinModelPortal:Q5BCY8
EnsemblFungi:CADANIAT00008225 GeneID:2875291 KEGG:ani:AN1592.2
OMA:CAAIANE Uniprot:Q5BCY8
Length = 397
Score = 99 (39.9 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 34/106 (32%), Positives = 49/106 (46%)
Query: 77 KALDEAVVLQPPVKIHKAMRYSLLAG--GKRVRPLLCIASCELVGGDESWAMPAACALEM 134
KA +E V+ +P Y +AG GK +R L A DE A + M
Sbjct: 100 KAANETVIREP---------YDYIAGIPGKEIRRKLLEAFNHWYKVDEQSCQAIATTVGM 150
Query: 135 IHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
H SL+ DD+ D+ + RR P +HEVFG + I + + + LA
Sbjct: 151 AHNASLLIDDIQ--DSSKLRRGVPCAHEVFGIAQTINSANYVYFLA 194
Score = 67 (28.6 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 261 EVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGI-ENAKS 318
+V V +GL FQ++DD ++ + K +DL GK ++P I E AK+
Sbjct: 265 QVIDVEQLVDVLGLYFQILDDYKNIREEKMAAQKGFFEDLTEGKFSFPICHAIGEGAKN 323
>UNIPROTKB|C9J6G3 [details] [associations]
symbol:GGPS1 "Geranylgeranyl pyrophosphate synthase"
species:9606 "Homo sapiens" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0004337 "geranyltranstransferase
activity" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AL391994 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004337
HOGENOM:HOG000169461 HGNC:HGNC:4249 ChiTaRS:GGPS1 IPI:IPI00946064
ProteinModelPortal:C9J6G3 SMR:C9J6G3 STRING:C9J6G3
Ensembl:ENST00000497327 ArrayExpress:C9J6G3 Bgee:C9J6G3
Uniprot:C9J6G3
Length = 230
Score = 119 (46.9 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 56/220 (25%), Positives = 90/220 (40%)
Query: 96 RYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRR 155
+Y L GK+VR L A + E EM+H SL+ DD+ DN + RR
Sbjct: 17 KYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DNSKLRR 74
Query: 156 SKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAG 215
P +H ++G + I + + + L LE V + PD V ++ + +E L G
Sbjct: 75 GFPVAHSIYGIPSVINSANYVYFLGLEKV---LTLDHPDAV-----KLFTRQLLE-LHQG 125
Query: 216 EFVDIASEGKDVSLKELEY--IHVHKTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCIG 273
+ +DI E EY + + KT L E ++ +G
Sbjct: 126 QGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYK----EDLKPLLNTLG 181
Query: 274 LLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGI 313
L FQ+ DD ++ K+ +DL GK ++P + I
Sbjct: 182 LFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAI 221
>UNIPROTKB|C9J7M1 [details] [associations]
symbol:GGPS1 "Geranylgeranyl pyrophosphate synthase"
species:9606 "Homo sapiens" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0004337 "geranyltranstransferase
activity" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AL391994 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004337
HOGENOM:HOG000169461 HGNC:HGNC:4249 ChiTaRS:GGPS1 IPI:IPI00945938
ProteinModelPortal:C9J7M1 SMR:C9J7M1 STRING:C9J7M1
Ensembl:ENST00000471812 ArrayExpress:C9J7M1 Bgee:C9J7M1
Uniprot:C9J7M1
Length = 242
Score = 119 (46.9 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 56/220 (25%), Positives = 90/220 (40%)
Query: 96 RYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRR 155
+Y L GK+VR L A + E EM+H SL+ DD+ DN + RR
Sbjct: 17 KYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DNSKLRR 74
Query: 156 SKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAG 215
P +H ++G + I + + + L LE V + PD V ++ + +E L G
Sbjct: 75 GFPVAHSIYGIPSVINSANYVYFLGLEKV---LTLDHPDAV-----KLFTRQLLE-LHQG 125
Query: 216 EFVDIASEGKDVSLKELEY--IHVHKTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCIG 273
+ +DI E EY + + KT L E ++ +G
Sbjct: 126 QGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYK----EDLKPLLNTLG 181
Query: 274 LLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGI 313
L FQ+ DD ++ K+ +DL GK ++P + I
Sbjct: 182 LFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAI 221
>ASPGD|ASPL0000062493 [details] [associations]
symbol:AN0654 species:162425 "Emericella nidulans"
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0004311
"farnesyltranstransferase activity" evidence=IEA] [GO:0016114
"terpenoid biosynthetic process" evidence=IEA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:BN001308 GO:GO:0016740
EMBL:AACD01000010 eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000169461 KO:K00804 OrthoDB:EOG4QVGMM
RefSeq:XP_658258.1 ProteinModelPortal:Q5BFM6 SMR:Q5BFM6
STRING:Q5BFM6 EnsemblFungi:CADANIAT00002021 GeneID:2876433
KEGG:ani:AN0654.2 OMA:ICDDYLN Uniprot:Q5BFM6
Length = 396
Score = 123 (48.4 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 56/220 (25%), Positives = 97/220 (44%)
Query: 97 YSLLAGGKRVRPLLCIA-SCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRR 155
Y L GK +R + A + L ES A+ + M+HT SL+ DD+ DN RR
Sbjct: 89 YMLQHPGKDLRRQMINAFNVWLKVPSESLAIITK-VVAMLHTASLLIDDVE--DNSLLRR 145
Query: 156 SKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAG 215
P +H ++G + I + + + LAL+ V + + D V+ + + G++ L
Sbjct: 146 GIPVAHSIYGTAQTINSANYVYFLALQEVQKLKSPAAIDIYVQELLNLHRGQGMD-LFWR 204
Query: 216 EFVDIASEGKDVSLKELEYIHVHKTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCIGLL 275
+ + SE + LE + +KT L V V +GL+
Sbjct: 205 DTLTCPSEDE-----YLEMVG-NKTGGLFRLAVKLMQAESSTGKDCVALVN----VLGLV 254
Query: 276 FQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIEN 315
FQ+ DD L+++ ++ K +DL GK ++P + I +
Sbjct: 255 FQICDDYLNLSDTTYTQNKGLCEDLTEGKFSFPIIHSIRS 294
>UNIPROTKB|F1NHT9 [details] [associations]
symbol:GGPS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0004311 "farnesyltranstransferase activity" evidence=IEA]
[GO:0004337 "geranyltranstransferase activity" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004337
GeneTree:ENSGT00390000010417 OMA:MLAIRLM EMBL:AADN02051945
EMBL:AADN02051946 IPI:IPI00589936 Ensembl:ENSGALT00000004102
Uniprot:F1NHT9
Length = 292
Score = 98 (39.6 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 35/124 (28%), Positives = 55/124 (44%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLD 149
+I + +Y L GK+VR L A + E EM+H SL+ DD+ D
Sbjct: 6 RILEPYQYLLQLPGKQVRTKLSQAFNHWLNVPEDKIQVIIEVTEMLHNASLLVDDIE--D 63
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRV---VRAIAEMCSA 206
N + RR P +H ++G + I + + L LE V + PD V R + E+
Sbjct: 64 NSKLRRGFPVAHSIYGIPSVINCANYVYFLGLEKV---LTLDHPDAVKVFTRQLLELHKG 120
Query: 207 MGVE 210
G++
Sbjct: 121 QGLD 124
Score = 63 (27.2 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 272 IGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGI 313
+GL FQ+ DD ++ K+ +DL GK ++P + I
Sbjct: 175 LGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAI 216
>UNIPROTKB|O95749 [details] [associations]
symbol:GGPS1 "Geranylgeranyl pyrophosphate synthase"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0004161 "dimethylallyltranstransferase activity"
evidence=IEA] [GO:0004337 "geranyltranstransferase activity"
evidence=IEA] [GO:0033384 "geranyl diphosphate biosynthetic
process" evidence=IEA] [GO:0033386 "geranylgeranyl diphosphate
biosynthetic process" evidence=IEA] [GO:0045337 "farnesyl
diphosphate biosynthetic process" evidence=IEA] [GO:0006720
"isoprenoid metabolic process" evidence=IDA] [GO:0004311
"farnesyltranstransferase activity" evidence=IDA] [GO:0005829
"cytosol" evidence=TAS] [GO:0006695 "cholesterol biosynthetic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] Reactome:REACT_111217 InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005829
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0006695 EMBL:AL391994 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161 GO:GO:0004337
GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 CTD:9453
HOGENOM:HOG000169461 HOVERGEN:HBG051729 KO:K00804 OrthoDB:EOG4CG08P
GO:GO:0006720 EMBL:AB017971 EMBL:AB019036 EMBL:AF125394
EMBL:AB016043 EMBL:AF057698 EMBL:BC005252 EMBL:BC067768
IPI:IPI00032892 RefSeq:NP_001032354.1 UniGene:Hs.730768 PDB:2Q80
PDBsum:2Q80 ProteinModelPortal:O95749 SMR:O95749 STRING:O95749
PhosphoSite:O95749 PaxDb:O95749 PRIDE:O95749 DNASU:9453
Ensembl:ENST00000282841 Ensembl:ENST00000358966
Ensembl:ENST00000476121 Ensembl:ENST00000488594 GeneID:9453
KEGG:hsa:9453 UCSC:uc001hwv.3 GeneCards:GC01P235490 HGNC:HGNC:4249
HPA:HPA029472 MIM:606982 neXtProt:NX_O95749 PharmGKB:PA28661
InParanoid:O95749 OMA:LLEPYRY PhylomeDB:O95749
BioCyc:MetaCyc:HS07859-MONOMER SABIO-RK:O95749 BindingDB:O95749
ChEMBL:CHEMBL4769 ChiTaRS:GGPS1 EvolutionaryTrace:O95749
GenomeRNAi:9453 NextBio:35412 ArrayExpress:O95749 Bgee:O95749
CleanEx:HS_GGPS1 Genevestigator:O95749 GermOnline:ENSG00000152904
Uniprot:O95749
Length = 300
Score = 119 (46.9 bits), Expect = 0.00013, P = 0.00013
Identities = 56/220 (25%), Positives = 90/220 (40%)
Query: 96 RYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRR 155
+Y L GK+VR L A + E EM+H SL+ DD+ DN + RR
Sbjct: 17 KYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DNSKLRR 74
Query: 156 SKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAG 215
P +H ++G + I + + + L LE V + PD V ++ + +E L G
Sbjct: 75 GFPVAHSIYGIPSVINSANYVYFLGLEKV---LTLDHPDAV-----KLFTRQLLE-LHQG 125
Query: 216 EFVDIASEGKDVSLKELEY--IHVHKTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCIG 273
+ +DI E EY + + KT L E ++ +G
Sbjct: 126 QGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYK----EDLKPLLNTLG 181
Query: 274 LLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGI 313
L FQ+ DD ++ K+ +DL GK ++P + I
Sbjct: 182 LFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAI 221
>UNIPROTKB|F1RGX0 [details] [associations]
symbol:GGPS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004337 "geranyltranstransferase activity"
evidence=IEA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004311 GO:GO:0004337 GeneTree:ENSGT00390000010417 KO:K00804
OMA:LLEPYRY EMBL:CU468332 RefSeq:XP_003483520.1
ProteinModelPortal:F1RGX0 Ensembl:ENSSSCT00000011119
GeneID:100739526 KEGG:ssc:100739526 Uniprot:F1RGX0
Length = 300
Score = 119 (46.9 bits), Expect = 0.00013, P = 0.00013
Identities = 56/220 (25%), Positives = 90/220 (40%)
Query: 96 RYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRR 155
+Y L GK+VR L A + E EM+H SL+ DD+ DN + RR
Sbjct: 17 KYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DNSKLRR 74
Query: 156 SKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAG 215
P +H ++G + I + + + L LE V + PD V ++ + +E L G
Sbjct: 75 GFPVAHSIYGIPSVINSANYVYFLGLEKV---LTLDHPDAV-----KLFTRQLLE-LHQG 125
Query: 216 EFVDIASEGKDVSLKELEY--IHVHKTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCIG 273
+ +DI E EY + + KT L E ++ +G
Sbjct: 126 QGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYK----EDLKPLLNTLG 181
Query: 274 LLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGI 313
L FQ+ DD ++ K+ +DL GK ++P + I
Sbjct: 182 LFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAI 221
>UNIPROTKB|Q9P885 [details] [associations]
symbol:carG "Geranylgeranyl pyrophosphate synthase"
species:29924 "Mucor circinelloides f. lusitanicus" [GO:0004311
"farnesyltranstransferase activity" evidence=IDA] [GO:0006720
"isoprenoid metabolic process" evidence=IDA] [GO:0016117
"carotenoid biosynthetic process" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005737
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0016117 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
GO:GO:0004161 GO:GO:0004337 GO:GO:0045337 GO:GO:0033384
GO:GO:0033386 EMBL:AJ276129 ProteinModelPortal:Q9P885 SMR:Q9P885
Uniprot:Q9P885
Length = 303
Score = 119 (46.9 bits), Expect = 0.00014, P = 0.00014
Identities = 54/210 (25%), Positives = 94/210 (44%)
Query: 134 MIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVA-VNIAGVS 192
M+H SL+ DD+ D+ + RR P +H ++G I + ++ LAL+ V +NI
Sbjct: 60 MLHNASLMIDDVQ--DDSDLRRGVPVAHHIYGVPQTINTANYVIFLALQEVMKLNI---- 113
Query: 193 PDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHV--HKTAKLLEXXXXX 250
P ++ ++C+ + L G+ +++ E EYI + +KT+ LL
Sbjct: 114 P-----SMMQVCTEELIN-LHRGQGIELYWRDSLTCPTEEEYIDMVNNKTSGLLRLAVRL 167
Query: 251 XXXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKL 310
I+ + N IG+ FQV DD +++ +S K +DL GK ++P +
Sbjct: 168 MQAASESD-IDYTPLVNI---IGIHFQVRDDYMNLQSTSYTNNKGFCEDLTEGKFSFPII 223
Query: 311 MGIENAKSFAGELLGQAIEELAYFEASKAA 340
I S +LL ++ E K A
Sbjct: 224 HAIRKDPSNR-QLLNIISQKPTSIEVKKYA 252
>CGD|CAL0004110 [details] [associations]
symbol:BTS1 species:5476 "Candida albicans" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0016114 "terpenoid biosynthetic
process" evidence=IEA] [GO:0004311 "farnesyltranstransferase
activity" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 CGD:CAL0004110 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
EMBL:AACQ01000199 HOGENOM:HOG000169461 KO:K00804 RefSeq:XP_711426.1
ProteinModelPortal:Q59NY1 STRING:Q59NY1 GeneID:3646982
KEGG:cal:CaO19.6674 Uniprot:Q59NY1
Length = 332
Score = 119 (46.9 bits), Expect = 0.00016, P = 0.00016
Identities = 51/204 (25%), Positives = 88/204 (43%)
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
DES + + + H SL+ DD+ D+ + RR P +H +G T I G+ + +A
Sbjct: 57 DESLLARISEIISVFHNSSLLIDDIE--DDSKYRRGVPVAHVKYGIPTTINCGNLMYFVA 114
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKEL----EYIH 236
L+ A ++G V+ + + L G+ +DI L++L EY+
Sbjct: 115 LQQ-AQQLSGPHGSMEVKFKSSQILIDELLNLHRGQGLDIYWRDYLKKLEKLPDVEEYLE 173
Query: 237 V--HKTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGK 294
+ KT L E +++ + A +G+L+QV DD L++ + K
Sbjct: 174 MIKDKTGGLFRLAIKLLSLYSDVK--ENDQLISLANLMGILYQVRDDYLNLVDAKYSAMK 231
Query: 295 -TAGKDLASGKATYPKLMGIENAK 317
T +DL GK + P L + K
Sbjct: 232 GTTCEDLIEGKLSLPILHCLRTTK 255
>UNIPROTKB|P56966 [details] [associations]
symbol:GGPS1 "Geranylgeranyl pyrophosphate synthase"
species:9913 "Bos taurus" [GO:0004311 "farnesyltranstransferase
activity" evidence=IDA] [GO:0006720 "isoprenoid metabolic process"
evidence=IDA] [GO:0045337 "farnesyl diphosphate biosynthetic
process" evidence=IEA] [GO:0033386 "geranylgeranyl diphosphate
biosynthetic process" evidence=IEA] [GO:0033384 "geranyl
diphosphate biosynthetic process" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0004337 "geranyltranstransferase
activity" evidence=IEA] [GO:0004161 "dimethylallyltranstransferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 GO:GO:0005737 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386
EMBL:BC120313 IPI:IPI00690042 RefSeq:NP_001073269.1
UniGene:Bt.71777 ProteinModelPortal:P56966 SMR:P56966 STRING:P56966
Ensembl:ENSBTAT00000017376 GeneID:780882 KEGG:bta:780882 CTD:9453
GeneTree:ENSGT00390000010417 HOGENOM:HOG000169461
HOVERGEN:HBG051729 InParanoid:P56966 KO:K00804 OMA:MLAIRLM
OrthoDB:EOG4CG08P NextBio:20924524 GO:GO:0006720 Uniprot:P56966
Length = 300
Score = 118 (46.6 bits), Expect = 0.00017, P = 0.00017
Identities = 57/221 (25%), Positives = 91/221 (41%)
Query: 96 RYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRR 155
+Y L GK+VR L A + E EM+H SL+ DD+ DN + RR
Sbjct: 17 KYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DNSKLRR 74
Query: 156 SKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEMCSAMGVEGLVA 214
P +H ++G + I + + + L LE V +N PD V ++ + +E L
Sbjct: 75 GFPVAHSIYGIPSVINSANYVYFLGLEKVLTLN----HPDAV-----KLFTRQLLE-LHQ 124
Query: 215 GEFVDIASEGKDVSLKELEY--IHVHKTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCI 272
G+ +DI E EY + + KT L E ++ +
Sbjct: 125 GQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYK----EDLKPLLDTL 180
Query: 273 GLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGI 313
GL FQ+ DD ++ K+ +DL GK ++P + I
Sbjct: 181 GLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAI 221
>FB|FBgn0019662 [details] [associations]
symbol:qm "quemao" species:7227 "Drosophila melanogaster"
[GO:0004337 "geranyltranstransferase activity" evidence=ISS]
[GO:0004161 "dimethylallyltranstransferase activity" evidence=ISS]
[GO:0004311 "farnesyltranstransferase activity" evidence=ISS;NAS]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0008354 "germ cell migration" evidence=IMP] [GO:0035050
"embryonic heart tube development" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0022008 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0035050 GO:GO:0008354
ChiTaRS:RPL10 FlyBase:FBgn0019662 EMBL:AF049659
ProteinModelPortal:O61539 SMR:O61539 STRING:O61539 PRIDE:O61539
InParanoid:O61539 ArrayExpress:O61539 Bgee:O61539 Uniprot:O61539
Length = 338
Score = 118 (46.6 bits), Expect = 0.00022, P = 0.00022
Identities = 55/218 (25%), Positives = 87/218 (39%)
Query: 103 GKRVRPLLCIASCE--LVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPAS 160
GK+ R L +A L+ G++ ++M+H SL+ DD+ DN RR P +
Sbjct: 36 GKQFRSELALAFNHWLLIPGEK--LAQIGDIVQMLHNSSLLIDDIE--DNSILRRGVPVA 91
Query: 161 HEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRV-VRAIAEMCSAMGVEGLVAGEFVD 219
H ++G ++ I A + L LALE V + +V + E+ G+E F
Sbjct: 92 HSIYGVASTINAANYALFLALEKVQ-QLDHPEATKVYTEQLLELHRGQGMEIYWRDSFT- 149
Query: 220 IASEGKDVSLKELEYIHVHKTAKLLEXXXXXXXXXXXXXXIEVERVRNYARCIGLLFQVV 279
SE D L + V KT L E +GL FQ+
Sbjct: 150 CPSES-DYKL-----MTVRKTGGLFMLAIRLMQLFSSNK----EDYSKLTAILGLYFQIR 199
Query: 280 DDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAK 317
DD +++ K+ +DL GK +P + + K
Sbjct: 200 DDYCNLSLKEYTENKSFAEDLTEGKFGFPVIHAVRTQK 237
>MGI|MGI:1341724 [details] [associations]
symbol:Ggps1 "geranylgeranyl diphosphate synthase 1"
species:10090 "Mus musculus" [GO:0004161
"dimethylallyltranstransferase activity" evidence=IEA] [GO:0004311
"farnesyltranstransferase activity" evidence=ISO] [GO:0004337
"geranyltranstransferase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006720 "isoprenoid metabolic
process" evidence=ISO] [GO:0008152 "metabolic process"
evidence=IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 MGI:MGI:1341724
GO:GO:0005737 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004311 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 CTD:9453 GeneTree:ENSGT00390000010417
HOGENOM:HOG000169461 HOVERGEN:HBG051729 KO:K00804 OrthoDB:EOG4CG08P
GO:GO:0006720 OMA:LLEPYRY EMBL:AB016044 EMBL:BC069913
IPI:IPI00123594 RefSeq:NP_034412.1 UniGene:Mm.148039
ProteinModelPortal:Q9WTN0 SMR:Q9WTN0 STRING:Q9WTN0
PhosphoSite:Q9WTN0 PaxDb:Q9WTN0 PRIDE:Q9WTN0
Ensembl:ENSMUST00000170957 GeneID:14593 KEGG:mmu:14593
InParanoid:Q9WTN0 NextBio:286348 Bgee:Q9WTN0 CleanEx:MM_GGPS1
Genevestigator:Q9WTN0 GermOnline:ENSMUSG00000021302 Uniprot:Q9WTN0
Length = 300
Score = 94 (38.1 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 34/118 (28%), Positives = 53/118 (44%)
Query: 96 RYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRR 155
RY L GK+VR L A + E EM+H SL+ DD+ D+ + RR
Sbjct: 17 RYLLQLPGKQVRSKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DSSKLRR 74
Query: 156 SKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRV---VRAIAEMCSAMGVE 210
P +H ++G + I + + + L LE V + PD V R + E+ G++
Sbjct: 75 GFPVAHSIYGVPSVINSANYVYFLGLEKV---LTLDHPDAVKLFTRQLLELHQGQGLD 129
Score = 63 (27.2 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 272 IGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGI 313
+GL FQ+ DD ++ K+ +DL GK ++P + I
Sbjct: 180 LGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAI 221
>RGD|1359680 [details] [associations]
symbol:Ggps1 "geranylgeranyl diphosphate synthase 1"
species:10116 "Rattus norvegicus" [GO:0004161
"dimethylallyltranstransferase activity" evidence=IEA] [GO:0004311
"farnesyltranstransferase activity" evidence=ISO;ISS] [GO:0004337
"geranyltranstransferase activity" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006720 "isoprenoid metabolic
process" evidence=ISO;ISS] [GO:0008152 "metabolic process"
evidence=ISO] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0033384 "geranyl diphosphate biosynthetic process"
evidence=IEA] [GO:0033386 "geranylgeranyl diphosphate biosynthetic
process" evidence=IEA] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 RGD:1359680 GO:GO:0005737 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 CTD:9453
GeneTree:ENSGT00390000010417 HOGENOM:HOG000169461
HOVERGEN:HBG051729 KO:K00804 OMA:MLAIRLM OrthoDB:EOG4CG08P
GO:GO:0006720 EMBL:AB118237 EMBL:AB118238 EMBL:AB118239
EMBL:AB118240 EMBL:BC090327 IPI:IPI00363014 RefSeq:NP_001007627.1
UniGene:Rn.54975 ProteinModelPortal:Q6F596 SMR:Q6F596 STRING:Q6F596
Ensembl:ENSRNOT00000022483 GeneID:291211 KEGG:rno:291211
UCSC:RGD:1359680 InParanoid:Q6F596 NextBio:632273
ArrayExpress:Q6F596 Genevestigator:Q6F596
GermOnline:ENSRNOG00000016767 Uniprot:Q6F596
Length = 300
Score = 91 (37.1 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 33/118 (27%), Positives = 53/118 (44%)
Query: 96 RYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRR 155
+Y L GK+VR L A + E EM+H SL+ DD+ D+ + RR
Sbjct: 17 KYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DSSKLRR 74
Query: 156 SKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRV---VRAIAEMCSAMGVE 210
P +H ++G + I + + + L LE V + PD V R + E+ G++
Sbjct: 75 GFPVAHSIYGVPSVINSANYVYFLGLEKV---LTLDHPDAVKLFTRQLLELHQGQGLD 129
Score = 63 (27.2 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 272 IGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGI 313
+GL FQ+ DD ++ K+ +DL GK ++P + I
Sbjct: 180 LGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAI 221
>UNIPROTKB|E2R3P8 [details] [associations]
symbol:GGPS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016740 "transferase activity" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 CTD:9453
GeneTree:ENSGT00390000010417 KO:K00804 OMA:LLEPYRY
EMBL:AAEX03002683 RefSeq:XP_003639028.1 RefSeq:XP_536340.2
Ensembl:ENSCAFT00000017968 GeneID:479198 KEGG:cfa:479198
Uniprot:E2R3P8
Length = 300
Score = 90 (36.7 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 27/89 (30%), Positives = 42/89 (47%)
Query: 96 RYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRR 155
+Y L GK+VR L A + E EM+H SL+ DD+ DN + RR
Sbjct: 17 KYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DNSKLRR 74
Query: 156 SKPASHEVFGESTAILAGDALLSLALEHV 184
P +H ++G + I + + + L L+ V
Sbjct: 75 GFPVAHSIYGIPSVINSANYVYFLGLQKV 103
Score = 64 (27.6 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 263 ERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGI 313
E ++ +GL FQ+ DD ++ K+ +DL GK ++P + I
Sbjct: 171 EDLKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAI 221
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.381 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 354 340 0.00095 116 3 11 22 0.39 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 97
No. of states in DFA: 603 (64 KB)
Total size of DFA: 204 KB (2115 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.60u 0.10s 24.70t Elapsed: 00:00:01
Total cpu time: 24.62u 0.10s 24.72t Elapsed: 00:00:01
Start: Thu May 9 20:14:39 2013 End: Thu May 9 20:14:40 2013