BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037716
(354 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224077270|ref|XP_002305196.1| predicted protein [Populus trichocarpa]
gi|222848160|gb|EEE85707.1| predicted protein [Populus trichocarpa]
Length = 365
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 245/365 (67%), Positives = 280/365 (76%), Gaps = 11/365 (3%)
Query: 1 MAVSATIPSYGNSTLFRNPINDFKKSPYRAPIFRFKLFSKKIKARHAQNSVFE------- 53
MA S TI Y NS L + PIN + R P+ K KI+A + + F+
Sbjct: 1 MAFSTTISFYDNSLLLKKPINGLINNQPRTPLGHLKFAPLKIQATYVASPSFKQSFQSQE 60
Query: 54 ----STDIPLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPL 109
S + P F F+EYMI KA QVNKALDEAV LQ P KI++AMRYSLLAGGKRVRP+
Sbjct: 61 VGNKSQKVSFPAFEFKEYMINKANQVNKALDEAVPLQHPQKINEAMRYSLLAGGKRVRPI 120
Query: 110 LCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTA 169
LCIASCELVGGDE AMPAACALEMIHTMSLIHDDLP +DND+ RR KP SH++FGE TA
Sbjct: 121 LCIASCELVGGDEGLAMPAACALEMIHTMSLIHDDLPCMDNDDLRRGKPTSHKIFGEDTA 180
Query: 170 ILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSL 229
+LAGDALLSLA EHVA N VS DRVV+AIAE+ S +G +GLVAG+ VDI SEGK+VSL
Sbjct: 181 VLAGDALLSLAFEHVARNTKNVSSDRVVQAIAELGSTVGSKGLVAGQIVDIDSEGKEVSL 240
Query: 230 KELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSS 289
LEYIHVHKTAKLLEAAVVCGA++GG +A VER+R YAR IGLLFQVVDDILDVTKSS
Sbjct: 241 STLEYIHVHKTAKLLEAAVVCGAIMGGADATSVERLRKYARSIGLLFQVVDDILDVTKSS 300
Query: 290 EELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYI 349
EELGKTAGKDLAS KATYPKLMGI+ AK FA +L+ +A + LA+F+ KAAPLY ANYI
Sbjct: 301 EELGKTAGKDLASDKATYPKLMGIDEAKKFAAQLVDEANQGLAFFDHVKAAPLYHFANYI 360
Query: 350 ASRQN 354
A+RQN
Sbjct: 361 ATRQN 365
>gi|255580739|ref|XP_002531191.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
gi|223529232|gb|EEF31206.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
Length = 372
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 244/372 (65%), Positives = 283/372 (76%), Gaps = 18/372 (4%)
Query: 1 MAVSATIPSYGNSTLFRNPINDFKKSPYRAPIFRFK-LFSKKIKARHAQNSVFESTD--- 56
MA SATIPS S L + + K+ + P+ K L K K V ++
Sbjct: 1 MAFSATIPSCETSLLLKKSSFNGLKNHSKVPLANLKFLVPAKTKLTATATRVMVVSNSSA 60
Query: 57 --------------IPLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAG 102
IPLP FPFEEYM KA+ VNKALDEA+ LQ PVKIH AMRYSLLAG
Sbjct: 61 AAAAQEPIKIIAPKIPLPAFPFEEYMATKAKHVNKALDEAIPLQNPVKIHDAMRYSLLAG 120
Query: 103 GKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHE 162
GKRVRP+LCIA+CELVGGDE+ AMPAACA+EMIHTMSLIHDDLP +DND+ RR KP +H+
Sbjct: 121 GKRVRPVLCIAACELVGGDEATAMPAACAMEMIHTMSLIHDDLPCMDNDDLRRGKPTNHK 180
Query: 163 VFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIAS 222
+FGE TAILAGDALLS + EHVA + VSPDRVVRAIAE+ SA+G EGLVAG+ VDI S
Sbjct: 181 MFGEETAILAGDALLSFSFEHVARSTKNVSPDRVVRAIAELGSAVGSEGLVAGQIVDIDS 240
Query: 223 EGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDI 282
EGKDVS+ +LEYIH+HKTAKLLEA+VVCGA++GG + VERVR YARCIGLLFQVVDDI
Sbjct: 241 EGKDVSVSDLEYIHIHKTAKLLEASVVCGAILGGADDESVERVRKYARCIGLLFQVVDDI 300
Query: 283 LDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPL 342
LDVTKSSEELGKTAGKDL + KATYPKLMGI+ A+ A +L+ QA +ELAYF+++KAAPL
Sbjct: 301 LDVTKSSEELGKTAGKDLITDKATYPKLMGIDEARKLAAKLVDQANQELAYFDSAKAAPL 360
Query: 343 YFLANYIASRQN 354
Y ANYIASRQN
Sbjct: 361 YHFANYIASRQN 372
>gi|325516280|gb|ADZ24718.1| geranylgeranyl pyrophosphate synthase 1 [Solanum pennellii]
Length = 365
Score = 476 bits (1225), Expect = e-132, Method: Compositional matrix adjust.
Identities = 234/366 (63%), Positives = 286/366 (78%), Gaps = 13/366 (3%)
Query: 1 MAVSATIPSYGNSTLFRNPINDFKKSPYRAPIFRFKLFSKKIKARHAQNSVFESTDIP-- 58
MA ATI N L N+F S P + KKI A NS F++ +
Sbjct: 1 MAFLATISGLDNLFLSNTLNNNFDFSRKLPPSQSYSFLHKKIHASDVANS-FQTFQVKER 59
Query: 59 ----------LPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRP 108
LP F F+EYM+ KA +VNKALDEA+ +Q P+K+H+AMRYSLLAGGKRVRP
Sbjct: 60 DVSSKAEKFILPEFEFQEYMVTKAIKVNKALDEAIPMQEPIKVHEAMRYSLLAGGKRVRP 119
Query: 109 LLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGEST 168
+LC+ASCE+VGGDES A+PAACA+EMIHTMSL+HDDLP +DND+ RR KP +H+VFGE+T
Sbjct: 120 ILCMASCEVVGGDESLAIPAACAVEMIHTMSLVHDDLPCMDNDDLRRGKPTNHKVFGENT 179
Query: 169 AILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVS 228
A+LAGDALLSLA EHVA V+P RVV+AI E+ SA+G EGLVAG+ VD+ASEGK VS
Sbjct: 180 AVLAGDALLSLAFEHVATKTQNVAPQRVVQAIGELGSAVGSEGLVAGQIVDLASEGKQVS 239
Query: 229 LKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKS 288
L ELEYIH HKTAKLLEAAVVCGA++GGGN ++VER+R+YARCIGLLFQVVDDILDVTKS
Sbjct: 240 LTELEYIHQHKTAKLLEAAVVCGAIMGGGNEVDVERMRSYARCIGLLFQVVDDILDVTKS 299
Query: 289 SEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANY 348
S+ELGKTAGKDL + KATYPKLMG+E A+ +AGEL+ +A+ EL+YF+++KAAPLY +A+Y
Sbjct: 300 SDELGKTAGKDLITDKATYPKLMGLEKARQYAGELMAKAMNELSYFDSAKAAPLYHIASY 359
Query: 349 IASRQN 354
IA+RQN
Sbjct: 360 IANRQN 365
>gi|350538439|ref|NP_001234087.1| geranylgeranyl pyrophosphate synthase 1 [Solanum lycopersicum]
gi|82547880|gb|ABB82554.1| geranylgeranyl pyrophosphate synthase 1 [Solanum lycopersicum]
Length = 365
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 233/366 (63%), Positives = 285/366 (77%), Gaps = 13/366 (3%)
Query: 1 MAVSATIPSYGNSTLFRNPINDFKKSPYRAPIFRFKLFSKKIKARHAQNSVFESTDIP-- 58
MA ATI N L P N+F S P + KKI A NS F++ +
Sbjct: 1 MAFLATISGLDNLFLSNTPNNNFAFSRKLPPSQSYSFLHKKIHASDVANS-FQTFQVKER 59
Query: 59 ----------LPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRP 108
LP F F+EYM+ KA +VNKALDEA+ +Q P+K+H+AMRYSLLAGGKRVRP
Sbjct: 60 DVSSKAEKFILPEFEFQEYMVTKAIKVNKALDEAIPMQEPIKVHEAMRYSLLAGGKRVRP 119
Query: 109 LLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGEST 168
+LC+ASCE+VGGDES A+PAACA+EMIHTMSL+HDDLP +DND+ RR KP +H++FGE+T
Sbjct: 120 ILCMASCEVVGGDESLAIPAACAVEMIHTMSLVHDDLPCMDNDDLRRGKPTNHKIFGENT 179
Query: 169 AILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVS 228
A+LAGDALLSLA EHVA V P RVV+AI E+ SA+G EGLVAG+ VD+ASEGK VS
Sbjct: 180 AVLAGDALLSLAFEHVATKTQNVPPQRVVQAIGELGSAVGSEGLVAGQIVDLASEGKQVS 239
Query: 229 LKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKS 288
L ELEYIH HKT+KLLEAAVVCGA++GGGN ++VER+R+YARCIGLLFQVVDDILDVTKS
Sbjct: 240 LTELEYIHHHKTSKLLEAAVVCGAIMGGGNEVDVERMRSYARCIGLLFQVVDDILDVTKS 299
Query: 289 SEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANY 348
S+ELGKTAGKDL + KATYPKLMG+E A+ +AGEL+ +A+ EL+YF+ +KAAPLY +A+Y
Sbjct: 300 SDELGKTAGKDLITDKATYPKLMGLEKARQYAGELMAKAMNELSYFDYAKAAPLYHIASY 359
Query: 349 IASRQN 354
IA+RQN
Sbjct: 360 IANRQN 365
>gi|290575616|gb|ADD49735.1| geranylgeranyl diphosphate synthase [Nicotiana tabacum]
Length = 365
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 240/368 (65%), Positives = 282/368 (76%), Gaps = 17/368 (4%)
Query: 1 MAVSATIPSYGNSTLFRNPINDF---KKSPYRAPIFRFKLFSKKIKARHAQNS--VFE-- 53
MA ATI + N L N+F K P R + KKI+AR NS F+
Sbjct: 1 MAFLATISGHENMLLSNTLNNNFIFSGKPPQR---HSYSFLPKKIQARSVANSSKTFQVK 57
Query: 54 -------STDIPLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRV 106
+ LP F FEEYM KA +VNKALD+A+ +Q P+KIH+AMRYSLLAGGKRV
Sbjct: 58 EEEFSSKTEKFILPKFDFEEYMKMKAIKVNKALDDAIPMQEPIKIHEAMRYSLLAGGKRV 117
Query: 107 RPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGE 166
RP+LC+ASCE+VGGDES A+PAAC++EMIHTMSLIHDDLP +DND+ RR KP SH+ FGE
Sbjct: 118 RPILCMASCEVVGGDESLAIPAACSVEMIHTMSLIHDDLPCMDNDDLRRGKPTSHKAFGE 177
Query: 167 STAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKD 226
TA+L GDALLSLA EHVA V+P RVV+A+ E+ SA+G +GLVAG+ VDIASEGK
Sbjct: 178 DTAVLTGDALLSLAFEHVASKTKDVTPQRVVQAVGELGSAVGSKGLVAGQIVDIASEGKQ 237
Query: 227 VSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVT 286
VSL ELEYIH HKT KLLEAAVVCGA+IGGGN IEVER+RNYARC+GLLFQVVDDILDVT
Sbjct: 238 VSLTELEYIHNHKTGKLLEAAVVCGAIIGGGNEIEVERMRNYARCLGLLFQVVDDILDVT 297
Query: 287 KSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLA 346
KSSEELGKTAGKDL + KATYPKLMG+E A+ AGEL+ +A++EL+YF+A+KAAPLY A
Sbjct: 298 KSSEELGKTAGKDLVTDKATYPKLMGLEKARELAGELVAKAMDELSYFDAAKAAPLYHFA 357
Query: 347 NYIASRQN 354
NYIA RQN
Sbjct: 358 NYIAHRQN 365
>gi|291170333|gb|ADD82422.1| geranylgeranyl diphosphate synthase [Jatropha curcas]
Length = 370
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 232/371 (62%), Positives = 280/371 (75%), Gaps = 18/371 (4%)
Query: 1 MAVSATIPSYGNSTLFRNPINDFKKSPYRAPI------FRFKLFSKKIKA---------- 44
MA SAT P+ N ++ N K P P FR K+ + ++
Sbjct: 1 MAFSATAPACNNILFKKSTFNGLKNRP-ELPFNHLKFHFRMKMTTTTVQVVSDSSPVTQP 59
Query: 45 -RHAQNSVFESTDIPLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGG 103
Q S+ S I LP FPFEEYM+ KA VN+ALD+AV L P+KIH AMRYSLLAGG
Sbjct: 60 LETTQESLSFSPKILLPNFPFEEYMVLKANNVNEALDKAVPLNHPLKIHAAMRYSLLAGG 119
Query: 104 KRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEV 163
KRVRP+LCIA+CELVGGDE+ AMP+ACA+EMIHTMSLIHDDLP +DND+ RR KP +H++
Sbjct: 120 KRVRPILCIAACELVGGDEAAAMPSACAMEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKM 179
Query: 164 FGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASE 223
FGE TAILAGDA+LSLA EH+A VSP+RVVR I E+ SA+G EGLVAG+ VD+ SE
Sbjct: 180 FGEETAILAGDAMLSLAFEHIARATKNVSPERVVRVITELGSAVGSEGLVAGQIVDVCSE 239
Query: 224 GKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDIL 283
GK+V++K+LEYIH+HKTAKLLEAAVVCGA+ GG + +ERVR YARCIGLLFQV+DDIL
Sbjct: 240 GKEVNVKDLEYIHIHKTAKLLEAAVVCGAIAGGADDESIERVRKYARCIGLLFQVIDDIL 299
Query: 284 DVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLY 343
DVTKSSEELGKTAGKDL S KATYPKL+GI+ A+ A +L+ +A +ELAYF+++KAAPLY
Sbjct: 300 DVTKSSEELGKTAGKDLVSDKATYPKLLGIDEARKLAAKLVDEANQELAYFDSAKAAPLY 359
Query: 344 FLANYIASRQN 354
ANYIASRQN
Sbjct: 360 HFANYIASRQN 370
>gi|4958920|dbj|BAA78047.1| GGPP synthase [Daucus carota]
Length = 367
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/367 (63%), Positives = 278/367 (75%), Gaps = 13/367 (3%)
Query: 1 MAVSATIPSYGNSTLFRNPINDFKKSPYRAPI-FRFKLFSKKIKARHAQNSVF-ESTDI- 57
MA T ++ NS L +N + D K+ + P + + KI+ +A NS +S ++
Sbjct: 1 MAFIQTNTAHENSLLSKNLLFDHLKNTGKTPSSYCTRHHPMKIQGANAVNSTLVQSVNVQ 60
Query: 58 ---------PLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRP 108
P P F FE YM +++NKALDEAV +Q P IH+AMRYSLLAGGKRVRP
Sbjct: 61 ELLTNPRVTPGPEFHFEGYMKTSGKKINKALDEAVPVQKPAIIHEAMRYSLLAGGKRVRP 120
Query: 109 LLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGEST 168
+LCIASCELVGG ESWAMP ACALEMIHTMSLIHDDLP +DND+ RR KP +H+V+GE T
Sbjct: 121 VLCIASCELVGGLESWAMPMACALEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEET 180
Query: 169 AILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVS 228
AILAGDALLSLA EHVA V+P RVVRAIAE+ SA+G +GLVAG+ +DI ++GKDV
Sbjct: 181 AILAGDALLSLAFEHVADATDMVTPGRVVRAIAELGSAVGSQGLVAGQIMDICNQGKDVD 240
Query: 229 LKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKS 288
L +LEYIHVHKT+KLLEA+VVCGA++GGGN IEVER+R YARCIGLLFQVVDDILDVTKS
Sbjct: 241 LNDLEYIHVHKTSKLLEASVVCGAILGGGNVIEVERLRKYARCIGLLFQVVDDILDVTKS 300
Query: 289 SEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEAS-KAAPLYFLAN 347
S ELGKTAGKDL + K TYPKLMG+E AK FA EL+ QA EEL+YF +S + APLY LA
Sbjct: 301 SAELGKTAGKDLVTDKTTYPKLMGLERAKRFATELVAQAEEELSYFGSSARVAPLYHLAK 360
Query: 348 YIASRQN 354
YIA RQN
Sbjct: 361 YIAYRQN 367
>gi|79154639|gb|ABB52066.1| putative geranylgeranyl pyrophosphate synthase [Daucus carota
subsp. sativus]
Length = 367
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 233/367 (63%), Positives = 277/367 (75%), Gaps = 13/367 (3%)
Query: 1 MAVSATIPSYGNSTLFRNPINDFKKSPYRAPI-FRFKLFSKKIKARHAQNSVF-ESTDI- 57
MA T ++ NS L +N + D K+ + P + + KI+ +A NS +S ++
Sbjct: 1 MAFIQTNTAHENSLLSKNLLFDHLKNTGKTPSSYCTRHHPMKIQGANAVNSTLVQSVNVQ 60
Query: 58 ---------PLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRP 108
P P F FE YM +++NKALDEAV +Q P IH+AMRYSLLAGGKRVRP
Sbjct: 61 ELLTNPRVTPGPEFHFEGYMKTSGKKINKALDEAVPVQKPAIIHEAMRYSLLAGGKRVRP 120
Query: 109 LLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGEST 168
+LCIASCELVGG ESWAMP ACALEMIHTMSLIHDDLP +DND+ RR KP +H+V+GE T
Sbjct: 121 VLCIASCELVGGLESWAMPMACALEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEET 180
Query: 169 AILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVS 228
AILAGDALLSLA EHVA V+P RVVRAIAE+ SA+G +GLVAG+ +DI ++GKDV
Sbjct: 181 AILAGDALLSLAFEHVADATDMVTPGRVVRAIAELGSAVGSQGLVAGQIMDICNQGKDVD 240
Query: 229 LKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKS 288
L +LEYIHVHKT+KLLEA+VVCGA++GGGN IEVER+R YARCIGLLFQVVDDILDVTKS
Sbjct: 241 LNDLEYIHVHKTSKLLEASVVCGAILGGGNVIEVERLRKYARCIGLLFQVVDDILDVTKS 300
Query: 289 SEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEAS-KAAPLYFLAN 347
S ELGKTAGKDL + K TYPKLMG+E AK FA EL+ QA EEL+YF +S + APLY LA
Sbjct: 301 SAELGKTAGKDLVTDKTTYPKLMGLERAKRFATELVAQAEEELSYFGSSTRVAPLYHLAK 360
Query: 348 YIASRQN 354
YIA R N
Sbjct: 361 YIAYRHN 367
>gi|224069436|ref|XP_002302977.1| predicted protein [Populus trichocarpa]
gi|222844703|gb|EEE82250.1| predicted protein [Populus trichocarpa]
Length = 314
Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust.
Identities = 207/302 (68%), Positives = 249/302 (82%)
Query: 53 ESTDIPLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCI 112
++ ++P F F+EYM+ K +QVN+AL+EAV LQ P+KIH+AMRYSLL GKR+ P+LCI
Sbjct: 13 QAQEVPSLAFQFKEYMLTKLKQVNEALEEAVPLQHPIKIHEAMRYSLLGNGKRMCPILCI 72
Query: 113 ASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILA 172
ASCELVGGDE AMP ACALEM+H MSLIHDDLP +DND+ RR KP +H+VFGE AILA
Sbjct: 73 ASCELVGGDEELAMPLACALEMVHAMSLIHDDLPCMDNDDLRRGKPTNHKVFGECIAILA 132
Query: 173 GDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKEL 232
GDALLSLA EH+A VSPD VVRAIAE+ SA+G G+VAG+ VDI SEGK+VS+K L
Sbjct: 133 GDALLSLAFEHIASKTKNVSPDCVVRAIAELGSAIGSRGVVAGQIVDIDSEGKEVSMKTL 192
Query: 233 EYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEEL 292
EYIHVHKTAKLLEA+ VCGA++GG + +ER+R YAR IGLL+QVVDDILD TKSSEEL
Sbjct: 193 EYIHVHKTAKLLEASAVCGAIMGGADDASIERLRKYARSIGLLYQVVDDILDATKSSEEL 252
Query: 293 GKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
GKTAGKDLAS KATYPKLMGI+ AK FA EL+ QA +E+A F+++KA PL+ LA+YIA R
Sbjct: 253 GKTAGKDLASNKATYPKLMGIDEAKKFAAELVEQAKKEIASFDSAKAVPLFHLADYIARR 312
Query: 353 QN 354
Q+
Sbjct: 313 QS 314
>gi|56122559|gb|AAV74397.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
palaestina]
Length = 359
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/316 (67%), Positives = 249/316 (78%)
Query: 39 SKKIKARHAQNSVFESTDIPLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYS 98
S +KA + + E+ F FEEYM AE+VN+ALD++V L+ P+KIH+AMRYS
Sbjct: 44 SAAMKATVTKGMIAETQSYKESAFQFEEYMAEMAERVNQALDDSVPLRHPLKIHEAMRYS 103
Query: 99 LLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKP 158
LLAGGKRVRP+LCIASCELVGGD A P ACALEMIHTMSLIHDDLP +DND+ RR P
Sbjct: 104 LLAGGKRVRPILCIASCELVGGDPVAAHPIACALEMIHTMSLIHDDLPCMDNDDFRRGMP 163
Query: 159 ASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFV 218
+H+ FGE TA+LAGDALLSLA EHVA GVS DRVVR IAE+ +G +GLV G+ V
Sbjct: 164 TNHKAFGEETAVLAGDALLSLAFEHVATRSTGVSADRVVRVIAELGKCVGSDGLVGGQIV 223
Query: 219 DIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQV 278
DIAS GK + L ELEYIH+HKTA LLEA+VVCGA++GGG A ++ER+R YAR IGLLFQV
Sbjct: 224 DIASAGKQIELSELEYIHLHKTAILLEASVVCGAIMGGGMAPDIERLRKYARYIGLLFQV 283
Query: 279 VDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASK 338
VDDILDVTKSSEELGKTAGKDLA+ KATYPKLMGI+ AK FA L+ QA +EL Y++ +K
Sbjct: 284 VDDILDVTKSSEELGKTAGKDLATDKATYPKLMGIDKAKEFADALVAQAHKELDYYDFAK 343
Query: 339 AAPLYFLANYIASRQN 354
AAPLY A+YIA RQN
Sbjct: 344 AAPLYHFADYIAYRQN 359
>gi|224069444|ref|XP_002302978.1| predicted protein [Populus trichocarpa]
gi|222844704|gb|EEE82251.1| predicted protein [Populus trichocarpa]
Length = 287
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/287 (75%), Positives = 244/287 (85%)
Query: 68 MIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMP 127
MI+K QVNKALDEAV LQ P KIH+AMRYSLLAGGKRVRP+LCIASCELVGGDE AMP
Sbjct: 1 MIQKGNQVNKALDEAVPLQHPRKIHEAMRYSLLAGGKRVRPILCIASCELVGGDEELAMP 60
Query: 128 AACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVN 187
ACALEMIHTMSLIHDDLP +DND+ RR P SH+VFGE TA+LAGDALL+LA EHVA N
Sbjct: 61 TACALEMIHTMSLIHDDLPCMDNDDLRRGMPTSHKVFGEDTAVLAGDALLALAFEHVARN 120
Query: 188 IAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAA 247
VS DRVV+A+AE+ SA+G +GLVAG+ VDI SEGK+VSL LEYIHVHKTAKLLEAA
Sbjct: 121 TKNVSSDRVVQALAELGSAVGSKGLVAGQVVDIESEGKEVSLSTLEYIHVHKTAKLLEAA 180
Query: 248 VVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATY 307
VVCGA++GG +A VER+R YAR IGLLFQVVDDILD+TKSSEELGKTAGKDL S KATY
Sbjct: 181 VVCGAIMGGADATSVERLRKYARSIGLLFQVVDDILDMTKSSEELGKTAGKDLTSDKATY 240
Query: 308 PKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
PKL+GI+ AK FA +L QA +EL +++ KAAPLY LA+YIASRQN
Sbjct: 241 PKLIGIDEAKKFAAQLTDQANQELGFYDPVKAAPLYHLASYIASRQN 287
>gi|449461425|ref|XP_004148442.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Cucumis sativus]
gi|449514740|ref|XP_004164466.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Cucumis sativus]
Length = 363
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 202/296 (68%), Positives = 244/296 (82%), Gaps = 1/296 (0%)
Query: 60 PTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
PTF F+EYM++K VN ALD AV L+ P++IH+AMRYSL+AGGKRVRP+LCIA+CELVG
Sbjct: 68 PTFNFKEYMVQKGASVNHALDAAVFLREPLRIHEAMRYSLMAGGKRVRPVLCIAACELVG 127
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
G+ES AMPAACA+EMIHTMSLIHDDLP +DND+ RR KP +H+VFGE A+LAGDALL+
Sbjct: 128 GNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAF 187
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVH 238
A EH+AV+ GVSP R+VRAI E+ ++G EGLVAG+ VDI SEG D L++LEYIH+H
Sbjct: 188 AFEHIAVSTIGVSPPRIVRAIGELAKSIGAEGLVAGQVVDINSEGAADAGLEQLEYIHLH 247
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KTA LLEAAVV GA++GGG+ +VE++RN+AR IGLLFQVVDDILDVTKSS ELGKTAGK
Sbjct: 248 KTAALLEAAVVLGAILGGGSNEDVEKLRNFARYIGLLFQVVDDILDVTKSSNELGKTAGK 307
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
DL + K TYPKLMGIE ++ FA +L A E+L+ F+ KAAPL LANYIA RQN
Sbjct: 308 DLVADKVTYPKLMGIEKSREFAQKLNRDAQEQLSGFDPDKAAPLIALANYIAYRQN 363
>gi|224133886|ref|XP_002327704.1| predicted protein [Populus trichocarpa]
gi|222836789|gb|EEE75182.1| predicted protein [Populus trichocarpa]
Length = 366
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/296 (68%), Positives = 240/296 (81%), Gaps = 1/296 (0%)
Query: 60 PTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
PTF F+ YMI+KA VNKALD AV L+ P KIH++MRYSLLAGGKRVRP+LC+A+CELVG
Sbjct: 71 PTFDFKSYMIQKANSVNKALDTAVTLKEPAKIHESMRYSLLAGGKRVRPVLCLAACELVG 130
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
G ES AMPAACA+EMIHTMSLIHDDLP +DND+ RR K +H VFGE A+LAGDALL+
Sbjct: 131 GSESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKSTNHIVFGEDVAVLAGDALLAF 190
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVH 238
A EH+AV+ VSP R+VRA+ E+ +G EGLVAG+ VDI SEG +V L++LE+IH+H
Sbjct: 191 AFEHIAVSTLNVSPLRIVRAVGELAKVIGAEGLVAGQVVDICSEGLSEVGLEQLEFIHIH 250
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KTAKLLE AVV GA++GGG EVE++R YAR IGLLFQVVDDILDVTKSS+ELGKTAGK
Sbjct: 251 KTAKLLEGAVVLGAILGGGTDEEVEKLRRYARSIGLLFQVVDDILDVTKSSQELGKTAGK 310
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
DL + K TYPKLMGIE ++ FA +LL +A E LA F+ KAAPL LANYIA RQN
Sbjct: 311 DLVADKVTYPKLMGIEKSREFAEKLLNEARELLAGFDQEKAAPLIALANYIAYRQN 366
>gi|356538045|ref|XP_003537515.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Glycine max]
Length = 355
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/300 (68%), Positives = 244/300 (81%), Gaps = 2/300 (0%)
Query: 56 DIPLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASC 115
D PL F F+ YMI KA VN+ALD A+ L+ P KIH+AMRYSLLAGGKRVRP+LCIA+C
Sbjct: 57 DTPL-NFDFKGYMIAKAHTVNQALDAAIALRDPHKIHQAMRYSLLAGGKRVRPVLCIAAC 115
Query: 116 ELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDA 175
ELVGG E+ A+PAACA+EMIHTMSLIHDDLP +DND+ RR KP +H+V+GE A+LAGDA
Sbjct: 116 ELVGGTEATAIPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDA 175
Query: 176 LLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEY 234
LL+ A EHVA + GVSP RVVRAI E+ ++G EGLVAG+ VDI SEG +V L+ LE+
Sbjct: 176 LLAFAFEHVAASTEGVSPSRVVRAIGELAKSIGTEGLVAGQVVDIDSEGVANVGLETLEF 235
Query: 235 IHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGK 294
IHVHKTA LLEAAVV GA++GGG+ EVE++R +ARCIGLLFQVVDDILDVTKSSEELGK
Sbjct: 236 IHVHKTAALLEAAVVLGAIVGGGSDEEVEKLRKFARCIGLLFQVVDDILDVTKSSEELGK 295
Query: 295 TAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
TAGKDL + K TYPKL+GI+ +K FA ELL A E+L+ F+ KAAPL+ L NYIA RQN
Sbjct: 296 TAGKDLVADKVTYPKLLGIDKSKEFAQELLKDAKEQLSGFDPPKAAPLFALTNYIAYRQN 355
>gi|224096916|ref|XP_002310785.1| predicted protein [Populus trichocarpa]
gi|222853688|gb|EEE91235.1| predicted protein [Populus trichocarpa]
Length = 365
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/296 (68%), Positives = 240/296 (81%), Gaps = 1/296 (0%)
Query: 60 PTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
PTF F+ YM++KA VNKALD AV L+ P KIH++MRYSLLAGGKRVRP+LC+A+C+LVG
Sbjct: 70 PTFDFKSYMLQKANSVNKALDAAVSLKEPAKIHESMRYSLLAGGKRVRPVLCLAACDLVG 129
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
G ES A+PAACA+EMIHTMSL+HDDLP +DND+ RR KP +H VFGE A+LAGDALLS
Sbjct: 130 GSESMALPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAGDALLSF 189
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVH 238
A EH+AV+ VSP R+VRAI E+ A+G EGLVAG+ VDI SEG +V L++LE+IHVH
Sbjct: 190 AFEHIAVSTIHVSPLRIVRAIGELAKAIGAEGLVAGQVVDICSEGLSEVGLEQLEFIHVH 249
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KTAKLLE AVV GA++GGG EVE++R YAR IGLLFQVVDDILDVTKSS+ELGKTAGK
Sbjct: 250 KTAKLLEGAVVLGAILGGGTDEEVEKLRTYARSIGLLFQVVDDILDVTKSSQELGKTAGK 309
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
DL + K TYP+LMGIE ++ FA LL +A + LA F KAAPL LANYIA RQN
Sbjct: 310 DLVADKVTYPRLMGIEKSREFAERLLNEAKDMLAGFNQEKAAPLIALANYIAYRQN 365
>gi|295322739|gb|ADG01841.1| geranylgeranyl-diphosphate synthase [Medicago sativa]
Length = 370
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/296 (67%), Positives = 245/296 (82%), Gaps = 1/296 (0%)
Query: 60 PTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
P F F+ YMI KA +VNKALD+AV L+ P+K+H+AMRYSLLAGGKRVRP+LC+A+CELVG
Sbjct: 75 PIFNFKSYMIEKATRVNKALDDAVSLREPLKVHEAMRYSLLAGGKRVRPVLCLAACELVG 134
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
G E AMPAACA+EMIHTMSLIHDDLP +DND+ RR KP +H+VFGE A+LAGDALL+
Sbjct: 135 GTEPMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAF 194
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVH 238
A EH+AV+ AGVSP R+VRAI E+ ++G EGLVAG+ VDI SEG DV L++LE+IH+H
Sbjct: 195 AFEHIAVSTAGVSPARIVRAIGELAKSIGSEGLVAGQVVDINSEGLSDVGLEQLEFIHLH 254
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KTA LLE AVV GA++GGG+ +VE++R +AR IGLLFQVVDDILDVTKSS+ELGKTAGK
Sbjct: 255 KTAALLEGAVVLGAILGGGSDEDVEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGK 314
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
DL + K TYPKL+GIE +K FA +L A E+L+ F+ +K+APL LANYIA RQN
Sbjct: 315 DLVADKVTYPKLLGIEKSKEFAEKLNRDAQEQLSGFDLNKSAPLIALANYIAYRQN 370
>gi|226510660|gb|ACO59905.1| geranylgeranyl pyrophosphate synthase [Elaeagnus umbellata]
Length = 365
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/296 (67%), Positives = 241/296 (81%), Gaps = 1/296 (0%)
Query: 60 PTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
PTF F+ YMI K VN+ALD AV L+ P KIH+AMRYSLLAGGKRVRP+LC+A+CELVG
Sbjct: 70 PTFNFKAYMIEKGHSVNQALDSAVALKEPEKIHEAMRYSLLAGGKRVRPVLCLAACELVG 129
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
G ES AMPAACA+EMIHTMSLIHDDLP +DND+ RR KP +H+VFGE A+LAGDALL+
Sbjct: 130 GHESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEEVAVLAGDALLAF 189
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVH 238
A EH+AV+ GVS R+VR+I E+ ++G EGLVAG+ VDI SEG DV L++LE+IHVH
Sbjct: 190 AFEHIAVSTVGVSTARIVRSIGELAKSIGSEGLVAGQVVDICSEGLSDVGLEQLEFIHVH 249
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KTA LLEA+VV GA++GGG+ IE+E++R +AR IGLLFQVVDDILDVTKSS+ELGKTAGK
Sbjct: 250 KTAALLEASVVLGAILGGGSDIEIEKLRMFARYIGLLFQVVDDILDVTKSSQELGKTAGK 309
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
DL + K TYPKLMGIE ++ FA +L A + L+ F+ KAAPL LANYIA RQN
Sbjct: 310 DLVADKVTYPKLMGIEKSREFADKLNKDAQDMLSGFDPEKAAPLIALANYIAHRQN 365
>gi|449497746|ref|XP_004160506.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Cucumis sativus]
Length = 340
Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/303 (67%), Positives = 243/303 (80%), Gaps = 1/303 (0%)
Query: 52 FESTDIPLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLC 111
E D+ P F F +YMI+K+ VN+ALDEAV LQ P+KIH+AMRYSLLAGGKRVRP+LC
Sbjct: 37 LEQNDVQNPPFRFRDYMIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLLAGGKRVRPVLC 96
Query: 112 IASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAIL 171
+A+C+LVGG ES A+PAAC++EMIHTMSLIHDDLP +DND+ RR KP +H +FGE A+L
Sbjct: 97 LAACDLVGGSESAAIPAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRMFGEDVAVL 156
Query: 172 AGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLK 230
AGDALLS A EH+A A VSP+RVVRAI E+ A G GLVAG+ VDI SEG DV L+
Sbjct: 157 AGDALLSFAFEHMAATKAEVSPERVVRAIGELAKATGTGGLVAGQVVDIDSEGADDVGLE 216
Query: 231 ELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSE 290
LEYIHVHKTA LLEAA V GA++GGG+ E+E++R +AR IGLLFQVVDDILDVTKS+E
Sbjct: 217 LLEYIHVHKTAALLEAAAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVVDDILDVTKSTE 276
Query: 291 ELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIA 350
ELGKTAGKD+A+ KATYPKLMGIE +K FA +L +AIE LA F+ KA PL L+NYIA
Sbjct: 277 ELGKTAGKDVAAEKATYPKLMGIEKSKEFAEKLREEAIEALAGFDPVKAEPLIALSNYIA 336
Query: 351 SRQ 353
RQ
Sbjct: 337 YRQ 339
>gi|20386368|gb|AAM21639.1|AF492023_1 geranylgeranyl pyrophosphate synthase [Cistus creticus]
Length = 369
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/294 (68%), Positives = 237/294 (80%), Gaps = 1/294 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F+ YM + A+ VN+AL+ AV L+ P+KIH+AMRYSLLAGGKRVRPLLCIA+CELVGGD
Sbjct: 76 FDFQSYMDQMADSVNQALESAVSLREPLKIHEAMRYSLLAGGKRVRPLLCIAACELVGGD 135
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
S AMPAACA+EMIHTMSLIHDDLP +DND+ RR KP +H+ FGE A+LAGDALLS A
Sbjct: 136 VSVAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKAFGEDIAVLAGDALLSFAF 195
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVHKT 240
EHVAV+ G SPD++VRA+ E+ A+G EGLVAG+ VDI SEG DV L LEYIHVHKT
Sbjct: 196 EHVAVSTVGASPDKIVRAVGELAKAVGKEGLVAGQVVDITSEGLNDVGLDHLEYIHVHKT 255
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
A LLEAAVV GA++GGG EVER+R +A CIGLLFQVVDDILDVTKSS ELGKTAGKDL
Sbjct: 256 AVLLEAAVVLGAILGGGTDEEVERLRKFAICIGLLFQVVDDILDVTKSSVELGKTAGKDL 315
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K TYPKLMG+E ++ FA +L A+E+L F+ KAAPL LA+YIA RQN
Sbjct: 316 VADKVTYPKLMGLEKSREFAEKLRDDAVEQLRVFDQVKAAPLIALAHYIAYRQN 369
>gi|157965847|gb|ABW06960.1| geranylgeranyl diphosphate synthase [Corylus avellana]
Length = 373
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/295 (67%), Positives = 242/295 (82%), Gaps = 1/295 (0%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
TF F+ YM++KA VN+ALD AV L+ P KIH+AMRYSLLAGGKRVRP+LCIA+CELVGG
Sbjct: 79 TFNFKTYMLQKANSVNQALDAAVSLKDPRKIHEAMRYSLLAGGKRVRPMLCIAACELVGG 138
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
ES AMPAAC++EMIHTMSLIHDDLP +DND+ RR KP +H+VFGE A+LAGDALL+ +
Sbjct: 139 TESIAMPAACSVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFS 198
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVHK 239
EH+AV+ GV P R++RAI E+ ++G EGLVAG+ VDI SEG DV L+ LE+IH+HK
Sbjct: 199 FEHIAVSTEGVPPARILRAIGELARSIGAEGLVAGQVVDICSEGLSDVGLEHLEFIHLHK 258
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
TA LLE AVV GA++GGG+ EVE++RN+AR IGLLFQVVDDILDVTKSS+ELGKTAGKD
Sbjct: 259 TAALLEGAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSQELGKTAGKD 318
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L + K TYPKLMG+E ++ FA +L A ++LA F+A KAAPL LANYIA RQN
Sbjct: 319 LVADKVTYPKLMGVEKSREFAEKLNKDAQDQLAGFDAEKAAPLIALANYIAHRQN 373
>gi|449448558|ref|XP_004142033.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Cucumis sativus]
Length = 375
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/303 (67%), Positives = 243/303 (80%), Gaps = 1/303 (0%)
Query: 52 FESTDIPLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLC 111
E D+ P F F +YMI+K+ VN+ALDEAV LQ P+KIH+AMRYSLLAGGKRVRP+LC
Sbjct: 72 LEQNDVQNPPFRFRDYMIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLLAGGKRVRPVLC 131
Query: 112 IASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAIL 171
+A+C+LVGG ES A+PAAC++EMIHTMSLIHDDLP +DND+ RR KP +H +FGE A+L
Sbjct: 132 LAACDLVGGSESAAIPAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRMFGEDVAVL 191
Query: 172 AGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLK 230
AGDALLS A EH+A A VSP+RVVRAI E+ A G GLVAG+ VDI SEG DV L+
Sbjct: 192 AGDALLSFAFEHMAATKAEVSPERVVRAIGELAKATGTGGLVAGQVVDIDSEGADDVGLE 251
Query: 231 ELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSE 290
LEYIHVHKTA LLEAA V GA++GGG+ E+E++R +AR IGLLFQVVDDILDVTKS+E
Sbjct: 252 LLEYIHVHKTAALLEAAAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVVDDILDVTKSTE 311
Query: 291 ELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIA 350
ELGKTAGKD+A+ KATYPKLMGIE +K FA +L +AIE LA F+ KA PL L+NYIA
Sbjct: 312 ELGKTAGKDVAAEKATYPKLMGIEKSKEFAEKLREEAIEALAGFDPVKAEPLIALSNYIA 371
Query: 351 SRQ 353
RQ
Sbjct: 372 YRQ 374
>gi|6277254|dbj|BAA86284.1| geranylgeranyl pyrophosphate synthase [Croton sublyratus]
Length = 368
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/294 (67%), Positives = 241/294 (81%), Gaps = 1/294 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F+ YM++KA +N+AL+ AV L+ P+KIH++MRYSLLAGGKRVRP LC+A+CELVGGD
Sbjct: 75 FDFKSYMVQKASAINQALEAAVSLREPLKIHESMRYSLLAGGKRVRPALCLAACELVGGD 134
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
ES AMPAACA+EMIHTMSLIHDDLP +DND+ RR KP +H VFGE+ A+LAGDALL+ A
Sbjct: 135 ESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGENVAVLAGDALLAFAF 194
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVHKT 240
EH+AV+ VSP R+VR + E+ A+G EGLVAG+ VDI SEG +V L++LE+IH+HKT
Sbjct: 195 EHIAVSTLNVSPVRIVRGVGELAKAIGAEGLVAGQVVDICSEGLSEVDLEKLEFIHIHKT 254
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
AKLLE AVV GA++GGG EVE++R YAR IGLLFQVVDDILDVTKSS+ELGKTAGKDL
Sbjct: 255 AKLLEGAVVLGAIMGGGTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGKDL 314
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K TYPKLMGIE ++ FA +L +A E+LA F+ KAAPL LANYIA RQN
Sbjct: 315 VADKVTYPKLMGIEKSREFAEKLNKEAQEQLAGFDPEKAAPLIALANYIAYRQN 368
>gi|46241274|gb|AAS82860.1| geranyl diphosphate synthase large subunit [Antirrhinum majus]
Length = 372
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/343 (58%), Positives = 259/343 (75%), Gaps = 1/343 (0%)
Query: 13 STLFRNPINDFKKSPYRAPIFRFKLFSKKIKARHAQNSVFESTDIPLPTFPFEEYMIRKA 72
S + + I+ F +P + I ++ Q S +++ P T F+ YM+ KA
Sbjct: 30 SIILPHKISLFPSNPKSKSKTHLRFSISSILTKNPQESSQKTSKDPTFTLDFKTYMLEKA 89
Query: 73 EQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACAL 132
VNKAL++AV+L+ P+KIH++MRYSLLAGGKRVRP+LCIA+CELVGG ES AMP+ACA+
Sbjct: 90 SSVNKALEQAVLLKEPLKIHESMRYSLLAGGKRVRPMLCIAACELVGGLESTAMPSACAV 149
Query: 133 EMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVS 192
EMIHTMSLIHDDLP +DND+ RR KP +H+++GE A+LAGDALL+ + EHVA + GVS
Sbjct: 150 EMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDALLAFSFEHVAKSTKGVS 209
Query: 193 PDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVHKTAKLLEAAVVCG 251
DR+VR I E+ +G EGLVAG+ VDI+SEG +V L+ LE+IHVHKTA LLEA+VV G
Sbjct: 210 SDRIVRVIGELAKCIGSEGLVAGQVVDISSEGMTEVGLEHLEFIHVHKTAALLEASVVLG 269
Query: 252 AVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLM 311
A++GG + +VE++R +ARCIGLLFQVVDDILDVTKSS+ELGKTAGKDL + K TYPKL+
Sbjct: 270 AIVGGADDEDVEKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKTTYPKLL 329
Query: 312 GIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
GIE ++ FA +L +A E+L F++ KAAPL LANYIA R N
Sbjct: 330 GIEKSREFAEKLNREAQEQLEGFDSVKAAPLIALANYIAYRDN 372
>gi|356559416|ref|XP_003547995.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Glycine max]
Length = 367
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/296 (67%), Positives = 238/296 (80%), Gaps = 1/296 (0%)
Query: 60 PTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
P F F+ YM+ KA VNKALD+AV L+ P KIH+AMRYSLLAGGKRVRP+LC+A+CELVG
Sbjct: 72 PIFDFKNYMVSKASAVNKALDDAVSLREPQKIHEAMRYSLLAGGKRVRPVLCVAACELVG 131
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
G+E+ AMPAACA+EMIHTMSLIHDDLP +DND+ RR KP +H+VFGE A+LAGDALL+
Sbjct: 132 GEEATAMPAACAIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAF 191
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVH 238
A EH+A + G SP R+VRAI E+ ++G EGLVAG+ VDI SEG DV L+ LE+IHVH
Sbjct: 192 AFEHIAASTRGASPGRIVRAIGELARSIGSEGLVAGQVVDINSEGLADVDLERLEFIHVH 251
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KTA LLE AVV GA++GGG EVE++R +AR IGLLFQVVDDILDVTKSS+ELGKTAGK
Sbjct: 252 KTAALLEGAVVLGAILGGGTDDEVEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGK 311
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
DL + K TYPKL+GIE +K FA +L A ++L F+ KAAPL LANYIA RQN
Sbjct: 312 DLVADKVTYPKLLGIEKSKVFAAKLNKDAQDQLVGFDPVKAAPLIALANYIAYRQN 367
>gi|75250205|sp|Q94ID7.1|GGPPS_HEVBR RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;
Short=GGPP synthase; Short=GGPS; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; Flags: Precursor
gi|14325238|dbj|BAB60678.1| geranylgeranyl diphosphate synthase [Hevea brasiliensis]
Length = 370
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/308 (63%), Positives = 246/308 (79%), Gaps = 1/308 (0%)
Query: 48 QNSVFESTDIPLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVR 107
+ ++ E + P P+F F+ YM++K +N+AL+ A+ LQ P KIH++MRYSLLAGGKRVR
Sbjct: 63 EETLQEEQNNPPPSFDFKSYMLQKGNSINQALEAAIPLQEPAKIHESMRYSLLAGGKRVR 122
Query: 108 PLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGES 167
P LC+A+CELVGG++S AMPAACA+EMIHTMSLIHDDLP +DND+ RR KP +H VFGE
Sbjct: 123 PALCLAACELVGGNDSMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGED 182
Query: 168 TAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KD 226
A+LAGDALL+ A EH+AV+ VS R+VRA+ E+ A+G EGLVAG+ VDI SEG +
Sbjct: 183 VAVLAGDALLAFAFEHIAVSTLNVSSARIVRAVGELAKAIGAEGLVAGQVVDINSEGSSE 242
Query: 227 VSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVT 286
V L++LE+IH+HKTAKLLE AVV GA++GGG EVE++R YAR IGLLFQVVDDILDVT
Sbjct: 243 VDLEKLEFIHIHKTAKLLEGAVVLGAILGGGTDEEVEKLRKYARDIGLLFQVVDDILDVT 302
Query: 287 KSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLA 346
KSS+ELGKTAGKDL + K TYPKL+GIE ++ FA +L +A E+LA F+ KAAPL LA
Sbjct: 303 KSSQELGKTAGKDLVADKVTYPKLLGIEKSREFAEKLNKEAQEQLAGFDPEKAAPLIALA 362
Query: 347 NYIASRQN 354
NYIA RQN
Sbjct: 363 NYIAHRQN 370
>gi|20386366|gb|AAM21638.1|AF492022_1 geranylgeranyl pyrophosphate synthase [Cistus creticus]
Length = 364
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/329 (62%), Positives = 251/329 (76%), Gaps = 5/329 (1%)
Query: 27 PYRAPIFRFKLFSKKIKARHAQNSVFESTDIPLPTFPFEEYMIRKAEQVNKALDEAVVLQ 86
P P FRF S ++ H + + D P F + YMI+KA VN+AL+ AV L+
Sbjct: 40 PVSKP-FRFFRPSNRL-GTHQRRRI--EQDPPKWAFDLKSYMIQKANSVNQALETAVSLR 95
Query: 87 PPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLP 146
P+KIH+AMRYS+LAGGKRVRP+LCIA+CELVGG+ES AMPAACA+EMIHTMSLIHDD P
Sbjct: 96 EPLKIHEAMRYSVLAGGKRVRPVLCIAACELVGGEESMAMPAACAVEMIHTMSLIHDDPP 155
Query: 147 FLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSA 206
+DND+ RR KP +H+VFGE A+LAGDALL+ + EH+ + GVSP R+VRA+ E+ +
Sbjct: 156 CMDNDDLRRGKPTNHKVFGEDIAVLAGDALLAFSFEHMTGSTVGVSPARIVRAVGELAKS 215
Query: 207 MGVEGLVAGEFVDIASEG-KDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERV 265
+G EGLVAG+ VDI SEG DV L+ LE+IHVHKTA LLE +VV GA++GGG+ EVE++
Sbjct: 216 IGSEGLVAGQVVDICSEGLTDVGLEHLEFIHVHKTAALLEGSVVLGAILGGGSDEEVEKL 275
Query: 266 RNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLG 325
R +ARCIGLLFQVVDDILDVTKSS ELGKTAGKDL + K TYPKLMGIE ++ FA EL
Sbjct: 276 RKFARCIGLLFQVVDDILDVTKSSTELGKTAGKDLVADKVTYPKLMGIEKSREFAEELKN 335
Query: 326 QAIEELAYFEASKAAPLYFLANYIASRQN 354
A+E+L F+ KAAPL LANYIA RQN
Sbjct: 336 DAVEQLRGFDQEKAAPLIALANYIAYRQN 364
>gi|374639387|gb|AEZ55682.1| geranylgeranyl diphosphate synthase 2 [Salvia miltiorrhiza]
Length = 346
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/295 (70%), Positives = 247/295 (83%)
Query: 60 PTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
P F FEEYM KA++VN ALD+AV LQ P+KIH+AMRYSLLAGGKRVRP+LC+ASCELVG
Sbjct: 52 PNFKFEEYMASKAKKVNTALDDAVPLQNPLKIHQAMRYSLLAGGKRVRPVLCLASCELVG 111
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
G+E+ A+P ACALEMIHTMSLIHDDLP +DND+ RR +P H+ FGE TA+LAGDALL+L
Sbjct: 112 GEEAAAVPMACALEMIHTMSLIHDDLPCMDNDDLRRGRPTCHKEFGEETAVLAGDALLAL 171
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A EHVA V RVV+AI E+ SA+G EGLVAG+ VD++SEGK +SL ELEYIHVHK
Sbjct: 172 AFEHVAAKTRNVDERRVVQAIVELGSAVGSEGLVAGQIVDLSSEGKLLSLGELEYIHVHK 231
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T+KLLEAAVVCGA++GGG +VE +R YARC+GLLFQVVDDILDVTK+SEELGKTAGKD
Sbjct: 232 TSKLLEAAVVCGAIMGGGGGAQVEALRKYARCVGLLFQVVDDILDVTKTSEELGKTAGKD 291
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L + KATYP+LMG+ AK FA +L A++EL+YF+ S+AAPLY LA YIASRQN
Sbjct: 292 LVTDKATYPRLMGLRKAKDFAADLAAMAVQELSYFDPSRAAPLYHLAQYIASRQN 346
>gi|164605012|dbj|BAF98302.1| geranylgeranyl-diphosphate synthase [Hevea brasiliensis]
Length = 370
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/308 (63%), Positives = 246/308 (79%), Gaps = 1/308 (0%)
Query: 48 QNSVFESTDIPLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVR 107
+ ++ E + P P+F F+ YM++KA +N+AL+ A+ LQ P KIH++MRYSLLAGGKRVR
Sbjct: 63 EETLQEEQNNPPPSFDFKSYMLQKANSINQALEAAIPLQEPAKIHESMRYSLLAGGKRVR 122
Query: 108 PLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGES 167
P LC+A+CELVGG++S AMPAACA+ MIHTMSLIHDDLP +DND+ RR KP +H VFGE
Sbjct: 123 PALCLAACELVGGNDSMAMPAACAVGMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGED 182
Query: 168 TAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KD 226
A+LAGDALL+ A EH+AV+ VS R+VRA+ E+ A+G EGLVAG+ VDI SEG +
Sbjct: 183 VAVLAGDALLAFAFEHIAVSTLNVSSARIVRAVGELAKAIGAEGLVAGQVVDINSEGSSE 242
Query: 227 VSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVT 286
V L++LE+IH+HKTAKLLE AVV GA++GGG EVE++R YAR IGLLFQVVDDILDVT
Sbjct: 243 VDLEKLEFIHIHKTAKLLEGAVVLGAILGGGTDEEVEKLRKYARGIGLLFQVVDDILDVT 302
Query: 287 KSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLA 346
KSS+ELGKTAGKDL + K TYPKL+GIE ++ FA +L +A E+LA F+ KAAPL LA
Sbjct: 303 KSSQELGKTAGKDLVADKVTYPKLLGIEKSREFAEKLNKEAQEQLAGFDPEKAAPLIALA 362
Query: 347 NYIASRQN 354
NYIA RQN
Sbjct: 363 NYIAYRQN 370
>gi|225458370|ref|XP_002283364.1| PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic
[Vitis vinifera]
Length = 371
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/294 (66%), Positives = 243/294 (82%), Gaps = 1/294 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F++YMI+KA V+KALDEAV ++ P+KIH+AMRYSLLAGGKRVRP LC+A+CELVGGD
Sbjct: 78 FSFKDYMIQKASSVHKALDEAVYVKSPIKIHEAMRYSLLAGGKRVRPALCLAACELVGGD 137
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
ES AMPAACA+EMIHTMSLIHDDLP +DND+ RR KP +H+VFGE A+LAGD+LL+ A
Sbjct: 138 ESNAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDSLLAFAF 197
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKT 240
EH+A +GVS R+V A+ E+ ++G EGLVAG+ VDI+S G+ DV L +LE+IH+HKT
Sbjct: 198 EHLATATSGVSSSRIVAAVGELAKSIGAEGLVAGQVVDISSTGQSDVGLDQLEFIHIHKT 257
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
A LLEAAVV GA++GGG+ EVE++R YAR +GLLFQVVDDILDVTKSS+ELGKTAGKDL
Sbjct: 258 AALLEAAVVLGALLGGGSDEEVEKLRKYARQVGLLFQVVDDILDVTKSSQELGKTAGKDL 317
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ KATYPKLMG+E ++ FA L +A E+L+ F+ KAAPL LA+YIA RQN
Sbjct: 318 VTDKATYPKLMGLEKSREFAENLNKEAKEQLSGFDLEKAAPLIALADYIAYRQN 371
>gi|229915240|gb|ACQ90682.1| geranyl diphosphate synthase large subunit [Humulus lupulus]
Length = 369
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/333 (60%), Positives = 251/333 (75%), Gaps = 5/333 (1%)
Query: 23 FKKSPYRAPIFRFKLFSKKIKARHAQNSVFESTDIPLPTFPFEEYMIRKAEQVNKALDEA 82
F+ R P F S + + A E TF F+ YM++KA VN+ALD A
Sbjct: 41 FQTPKQRRPTSSFSSISAVLTEQEAVTEDEEQKS----TFNFKSYMVQKANSVNQALDAA 96
Query: 83 VVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIH 142
V+L+ P IH+AMRYSLLAGGKRVRP+LC+++CELVGGDES AMPAACA+EMIHTMSLIH
Sbjct: 97 VLLREPQMIHEAMRYSLLAGGKRVRPVLCLSACELVGGDESVAMPAACAVEMIHTMSLIH 156
Query: 143 DDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAE 202
DDLP +DND+ RR KP +H+VFGE A+LAGDALL+ A EHVAV+ GV R++RAI E
Sbjct: 157 DDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAYAFEHVAVSTVGVPAARIIRAIGE 216
Query: 203 MCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIE 261
+ ++G EGLVAG+ VDI SEG +V L++LE+IH+HKTA LLEA+VV GA++GGG +
Sbjct: 217 LAKSIGSEGLVAGQVVDIDSEGLANVGLEQLEFIHLHKTAALLEASVVLGAILGGGTDEQ 276
Query: 262 VERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAG 321
VE +R++ARCIGLLFQ VDDILDVTKSS+ELGKTAGKDL + KATYP+LMGIE ++ FA
Sbjct: 277 VEELRSFARCIGLLFQAVDDILDVTKSSQELGKTAGKDLVADKATYPRLMGIEKSREFAE 336
Query: 322 ELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+L +A E L F+ KAAPL LANYIA RQN
Sbjct: 337 KLNREAQEHLGGFDPQKAAPLIALANYIAYRQN 369
>gi|87299435|dbj|BAE79550.1| geranylgeranyl pyrophosphate synthase [Chrysanthemum x morifolium]
Length = 345
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/318 (62%), Positives = 246/318 (77%), Gaps = 9/318 (2%)
Query: 37 LFSKKIKARHAQNSVFESTDIPLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMR 96
L +K+ +++H Q ES F F+ YM++KA VN+ALD+AV ++ P KIH++MR
Sbjct: 37 LLTKEQQSKHTQ---LESE------FDFKSYMVQKANTVNQALDDAVPIREPKKIHESMR 87
Query: 97 YSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRS 156
YSLLAGGKRVRP+LC+ASCELVGGD+ AMPAACA+EMIHTMSL+HDDLP +DND+ RR
Sbjct: 88 YSLLAGGKRVRPILCLASCELVGGDQISAMPAACAVEMIHTMSLMHDDLPCMDNDDFRRG 147
Query: 157 KPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGE 216
KP +H V+GE A+LAGDALLS A EHVA VS +R+VRAI E+ +G EGLVAG+
Sbjct: 148 KPTNHIVYGEEIAVLAGDALLSFAFEHVATATKDVSAERIVRAIGELAKCIGSEGLVAGQ 207
Query: 217 FVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLF 276
VDI SEG DV L+ LE+IH+HKTA LLE +VV GA++GGG+ +EVER+R + R IGLLF
Sbjct: 208 VVDICSEGADVGLEHLEFIHLHKTAALLEGSVVLGAIMGGGSDVEVERLRKFVRSIGLLF 267
Query: 277 QVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEA 336
QVVDDILDVTKSSEELGKTAGKDL + K TYPKL+GIE ++ FA +L +A E+L F+
Sbjct: 268 QVVDDILDVTKSSEELGKTAGKDLVADKTTYPKLLGIEKSREFAEKLNKEAQEQLKEFDI 327
Query: 337 SKAAPLYFLANYIASRQN 354
KAAPL LANYIA R N
Sbjct: 328 RKAAPLIALANYIAYRDN 345
>gi|79154586|gb|ABB52065.1| putative geranylgeranyl pyrophosphate synthase [Daucus carota
subsp. sativus]
Length = 365
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 204/347 (58%), Positives = 258/347 (74%), Gaps = 16/347 (4%)
Query: 24 KKSPYRAPIFRFKLFSKKIKARHAQN---------SVFESTDIPL------PTFPFEEYM 68
+KSP +F + +K++ QN S F +T I + PTF F+ YM
Sbjct: 19 QKSPSNKLVFHGLNSNPFLKSKPPQNVIPYSSMSISSFHTTKIAMDSSPKPPTFDFKSYM 78
Query: 69 IRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPA 128
+ KA VNKALD +V LQ PVKIH++MRYSLLAGGKRVRP+L IA+CEL GG E+ AMP+
Sbjct: 79 LEKAISVNKALDASVSLQEPVKIHESMRYSLLAGGKRVRPILSIAACELFGGHEAVAMPS 138
Query: 129 ACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNI 188
ACA+EMIHTMSL+HDDLPF+DND+ RR KP +H+V+GES A+LAGDA+L+LA VA
Sbjct: 139 ACAVEMIHTMSLMHDDLPFMDNDDLRRGKPTNHKVYGESVAVLAGDAMLALAFHLVATET 198
Query: 189 AGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKTAKLLEAA 247
+GVS +VVR I E+ A+G EGLVAG+ VD+ SEG ++ LK+LE+IH KTA LLE +
Sbjct: 199 SGVSSSQVVRVIVELAKAIGAEGLVAGQIVDVCSEGDPNLGLKDLEFIHRSKTAALLEGS 258
Query: 248 VVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATY 307
VV GA++GG N EVE+VR YARCIGLLFQVVDDILDVTKSS+ELGKTAGKDL + K TY
Sbjct: 259 VVMGAILGGANDEEVEKVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVADKTTY 318
Query: 308 PKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
PKL+GIE ++ F+ EL +A+++LA F + KAAPL +ANYIA+R N
Sbjct: 319 PKLIGIEKSREFSDELKREAVDQLAGFNSDKAAPLIAMANYIANRDN 365
>gi|357518399|ref|XP_003629488.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
gi|295322741|gb|ADG01842.1| geranylgeranyl-diphosphate synthase [Medicago truncatula]
gi|355523510|gb|AET03964.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
Length = 372
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/296 (66%), Positives = 241/296 (81%), Gaps = 1/296 (0%)
Query: 60 PTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
P F F+ YMI KA +VNKALD+AV L+ P+K+H+AMRYSLLAGGKRVRP+LC+A+CELVG
Sbjct: 77 PIFNFKSYMIEKATRVNKALDDAVSLREPLKVHEAMRYSLLAGGKRVRPVLCLAACELVG 136
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
G E AMPAACA+EMIHTMSLIHDDLP +DND+ RR KP +H+VFGE A+LAGDALL+
Sbjct: 137 GTEPMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAF 196
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVH 238
A EH+AV+ VSP R+VRAI E+ ++G EGLVAG+ VDI SEG DV L+ LE+IH+H
Sbjct: 197 AFEHIAVSTVDVSPARIVRAIGELAKSIGSEGLVAGQVVDINSEGLSDVGLERLEFIHLH 256
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KTA LLE AVV GA++GGG+ +VE++R +A IGLLFQVVDDILDVTKSS+ELGKTAGK
Sbjct: 257 KTAALLEGAVVLGAILGGGSDEDVEKLRKFATYIGLLFQVVDDILDVTKSSQELGKTAGK 316
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
DL + K TYPKL+GIE +K FA +L A E+L+ F+ +K+APL LANYIA RQN
Sbjct: 317 DLVADKVTYPKLLGIEKSKEFAEKLNRDAQEQLSGFDLNKSAPLIALANYIAYRQN 372
>gi|225430848|ref|XP_002273789.1| PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic
[Vitis vinifera]
Length = 368
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/296 (65%), Positives = 240/296 (81%), Gaps = 1/296 (0%)
Query: 60 PTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
P F F Y++ KA VNKALD+AV ++ PVK+H++MRYSLLAGGKRVRP+LCIA+CELVG
Sbjct: 73 PAFNFNAYILDKANSVNKALDDAVPIREPVKVHESMRYSLLAGGKRVRPVLCIAACELVG 132
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
GDE+ AMPAACA+EMIHTMSL+HDDLP +DND+ RR KP +H+VFGE+ AILAGDALL+
Sbjct: 133 GDEATAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGENVAILAGDALLAF 192
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVH 238
A EH+A GV P +VRA+ E+ ++G EGLVAG+ VDI SEG KDV L+ LEYIHVH
Sbjct: 193 AFEHMATATVGVPPGWIVRAVGELAKSIGSEGLVAGQVVDICSEGLKDVGLEHLEYIHVH 252
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KTA LLE AVV GA++GGG+ E+E++R +ARCIGLLFQVVDDILDVTKSS+ELGKTAGK
Sbjct: 253 KTAALLEGAVVLGAILGGGSNEEIEKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGK 312
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
DL + K TYPKL+GIE ++ A +L A ++L+ F+ KAAPL L+NYIA RQN
Sbjct: 313 DLVADKLTYPKLLGIEKSRELAEQLNKDAKDQLSGFDPDKAAPLIALSNYIAYRQN 368
>gi|34484306|gb|AAQ72786.1| geranylgeranyl diphosphate synthase [Ginkgo biloba]
gi|157072687|gb|ABV08866.1| geranylgeranyl diphosphate synthase [Ginkgo biloba]
gi|157072689|gb|ABV08867.1| geranylgeranyl diphosphate synthase [Ginkgo biloba]
Length = 391
Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/295 (68%), Positives = 235/295 (79%), Gaps = 2/295 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F++YM KA VN+ALD+AV P KIH++MRYSLLAGGKRVRP LCIA+CELVGG
Sbjct: 97 FDFKKYMYSKAISVNEALDKAVPTHYPEKIHESMRYSLLAGGKRVRPTLCIAACELVGGT 156
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
E AMPAACA+EMIHTM+LIHDDLP +DND RR KP +H+ FGE TA+LAGDALLS A
Sbjct: 157 EDLAMPAACAMEMIHTMTLIHDDLPCMDNDNLRRGKPTNHKAFGEDTAVLAGDALLSFAF 216
Query: 182 EHVAVNIA-GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVHK 239
EH+A + + V +RV+R I E+ +MG EGLVAG+ VDIASEG V LK LEYIH+HK
Sbjct: 217 EHIARSTSKTVESERVLRVICELGKSMGSEGLVAGQIVDIASEGDTSVDLKTLEYIHLHK 276
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
TA LLE +VV GA+IGG + E+ER R YARC+GLLFQVVDDILDVTK+SEELGKTAGKD
Sbjct: 277 TAVLLECSVVSGAIIGGASEEEIERTRRYARCVGLLFQVVDDILDVTKTSEELGKTAGKD 336
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L S KATYPKLMG+E AK FA EL+ +A EEL+YF+ KAAPL LA+YIA RQN
Sbjct: 337 LISDKATYPKLMGLEKAKEFAVELVNKAKEELSYFDPVKAAPLLGLADYIAFRQN 391
>gi|147843373|emb|CAN78430.1| hypothetical protein VITISV_032031 [Vitis vinifera]
Length = 308
Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/296 (65%), Positives = 240/296 (81%), Gaps = 1/296 (0%)
Query: 60 PTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
P F F Y++ KA VNKALD+AV ++ PVK+H++MRYSLLAGGKRVRP+LCIA+CELVG
Sbjct: 13 PAFNFNAYILDKANSVNKALDDAVPIREPVKVHESMRYSLLAGGKRVRPVLCIAACELVG 72
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
GDE+ AMPAACA+EMIHTMSL+HDDLP +DND+ RR KP +H+VFGE+ AILAGDALL+
Sbjct: 73 GDEATAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGENVAILAGDALLAF 132
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVH 238
A EH+A GV P +VRA+ E+ ++G EGLVAG+ VDI SEG KDV L+ LEYIHVH
Sbjct: 133 AFEHMATATVGVPPGWIVRAVGELAKSIGSEGLVAGQVVDICSEGLKDVGLEHLEYIHVH 192
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KTA LLE AVV GA++GGG+ E+E++R +ARCIGLLFQVVDDILDVTKSS+ELGKTAGK
Sbjct: 193 KTAALLEGAVVLGAILGGGSNEEIEKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGK 252
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
DL + K TYPKL+GIE ++ A +L A ++L+ F+ KAAPL L+NYIA RQN
Sbjct: 253 DLVADKLTYPKLLGIEKSRELAEQLNKDAKDQLSGFDPDKAAPLIALSNYIAYRQN 308
>gi|357483275|ref|XP_003611924.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
gi|355513259|gb|AES94882.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
Length = 371
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/303 (66%), Positives = 241/303 (79%), Gaps = 1/303 (0%)
Query: 53 ESTDIPLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCI 112
E IP F F YM+ KA VNKALDEA+VLQ P KI++AMRYSLLAGGKRVRP+LCI
Sbjct: 69 EEETIPNFNFNFNGYMLEKANIVNKALDEAIVLQEPEKIYEAMRYSLLAGGKRVRPVLCI 128
Query: 113 ASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILA 172
A+C LVGG E ++P+ACA+EMIHTMSLIHDDLP +DND+ RR KP +H+V+GE A+LA
Sbjct: 129 AACGLVGGKEEASIPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLA 188
Query: 173 GDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKE 231
GDALLS A EHVAV+ GV P+R+VRAIAE+ A+G EGLVAG+ VD+ SEGK +V L+
Sbjct: 189 GDALLSFAFEHVAVSTIGVPPERIVRAIAELAKAVGKEGLVAGQIVDLESEGKSNVGLET 248
Query: 232 LEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEE 291
LE+IH+ KTA LLEAAVV GA++GGG E+E++R +AR IGLLFQVVDDILDVTKSSEE
Sbjct: 249 LEFIHLRKTAALLEAAVVMGAIVGGGTEDEIEKLRKFARYIGLLFQVVDDILDVTKSSEE 308
Query: 292 LGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIAS 351
LGKTAGKDL + KATYPKL+G+E +K FA +L+ A + L F+ KAAPL L NYIA
Sbjct: 309 LGKTAGKDLTADKATYPKLLGLEKSKEFADKLIKDAHDCLIGFDVEKAAPLVALTNYIAY 368
Query: 352 RQN 354
RQN
Sbjct: 369 RQN 371
>gi|15234534|ref|NP_195399.1| geranylgeranyl pyrophosphate synthase 11 [Arabidopsis thaliana]
gi|13432144|sp|P34802.2|GGPP1_ARATH RecName: Full=Heterodimeric geranylgeranyl pyrophosphate synthase
large subunit 1, chloroplastic; Short=GGPP synthase 1;
Short=GGPS1; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase 1; AltName: Full=Dimethylallyltranstransferase
1; AltName: Full=Farnesyl diphosphate synthase 1;
AltName: Full=Farnesyltranstransferase 1; AltName:
Full=Geranyltranstransferase 1; Flags: Precursor
gi|2464899|emb|CAB16803.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|7270630|emb|CAB80347.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|110742524|dbj|BAE99179.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|332661305|gb|AEE86705.1| geranylgeranyl pyrophosphate synthase 11 [Arabidopsis thaliana]
Length = 371
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/299 (66%), Positives = 242/299 (80%), Gaps = 5/299 (1%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
+F F Y+I KAE VNKALD AV L+ P+KIH+AMRYSLLAGGKRVRP+LCIA+CELVGG
Sbjct: 73 SFDFMSYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGG 132
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
+ES AMPAACA+EMIHTMSLIHDDLP +DND+ RR KP +H+VFGE A+LAGDALLS A
Sbjct: 133 EESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFA 192
Query: 181 LEHVAVNIAG--VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG---KDVSLKELEYI 235
EH+A + VSP RVVRA+ E+ A+G EGLVAG+ VDI+SEG DV L+ LE+I
Sbjct: 193 FEHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFI 252
Query: 236 HVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKT 295
H+HKTA LLEA+ V GA++GGG+ E+ER+R +ARCIGLLFQVVDDILDVTKSS+ELGKT
Sbjct: 253 HLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKT 312
Query: 296 AGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
AGKDL + K TYPK+MG+E ++ FA +L +A ++L F++ K APL LANYIA RQN
Sbjct: 313 AGKDLIADKLTYPKIMGLEKSREFAEKLNREARDQLLGFDSDKVAPLLALANYIAYRQN 371
>gi|9971808|gb|AAG10424.1| GGDP synthase [Tagetes erecta]
Length = 361
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/363 (57%), Positives = 263/363 (72%), Gaps = 16/363 (4%)
Query: 3 VSATIPSYGNSTLFRNPI--NDFKKSPYRAPIFRFK---------LFSKKIKARHAQNSV 51
V+ T YG+ + R+PI N +KS P+ F + +K+ ++ ++ +
Sbjct: 4 VNPTSLFYGSPIMTRSPIFLNPTRKS---QPVSSFSASNFPQISAILTKEHQSNAPEDKI 60
Query: 52 FESTDIPLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLC 111
E+ F F+ YM+ KA VN+ALD AV L+ P+KIH++MRYSLLAGGKRVRP+LC
Sbjct: 61 KETQS--KFEFDFKSYMLEKANLVNQALDLAVPLKDPIKIHESMRYSLLAGGKRVRPVLC 118
Query: 112 IASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAIL 171
IA+CELVGGD AMPAACA+EMIHTMSL+HDDLP +DND+ RR KP +H V+GE A+L
Sbjct: 119 IAACELVGGDGLTAMPAACAVEMIHTMSLMHDDLPCMDNDDFRRGKPTNHMVYGEEIAVL 178
Query: 172 AGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKE 231
GDA+LS A EH+A GVS DR++RAI E+ +G EGLVAG+ VDI SEG DV L+
Sbjct: 179 GGDAMLSFAFEHMATATKGVSSDRILRAIGELAKCIGSEGLVAGQVVDICSEGADVGLEH 238
Query: 232 LEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEE 291
LE+IH+HKTA LLE +VV GA++GGG+ E+E++R +AR IGLLFQVVDDILDVTKSSEE
Sbjct: 239 LEFIHLHKTAALLEGSVVLGAILGGGSDGEIEKLRKFARSIGLLFQVVDDILDVTKSSEE 298
Query: 292 LGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIAS 351
LGKTAGKDL S K TYPKL+GIE ++ FA EL A E+L+ F+ KAAPL LANYIA
Sbjct: 299 LGKTAGKDLVSDKTTYPKLLGIEKSREFAEELNKDAQEQLSEFDPRKAAPLIALANYIAY 358
Query: 352 RQN 354
RQN
Sbjct: 359 RQN 361
>gi|356498416|ref|XP_003518048.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Glycine max]
Length = 350
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/296 (66%), Positives = 236/296 (79%), Gaps = 1/296 (0%)
Query: 60 PTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
P F F+ YM+ KA VNKALD++V L+ P KIH+AMRYSLLAGGKRVRP+LC+A+CELVG
Sbjct: 55 PIFDFKNYMLSKASAVNKALDDSVSLREPKKIHEAMRYSLLAGGKRVRPVLCVAACELVG 114
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
G E+ AMPAACALEMIHTMSLIHDDLP +DND+ RR KP +H VFGE A+LAGDALL+
Sbjct: 115 GHEATAMPAACALEMIHTMSLIHDDLPCMDNDDLRRGKPTNHTVFGEDVAVLAGDALLAF 174
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVH 238
A EH+A + G S R++RAI E+ ++G EGLVAG+ VDI SEG DV L+ LE+IHVH
Sbjct: 175 AFEHIAASTRGASAPRILRAIGELARSIGSEGLVAGQVVDINSEGLADVGLERLEFIHVH 234
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KTA LLE AVV GA++GGG EVE++R +AR IGLLFQVVDDILDVTKSS+ELGKTAGK
Sbjct: 235 KTAALLEGAVVLGAILGGGTDDEVEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGK 294
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
DL + K TYPKL+GIE +K FA +L A ++LA F+ KAAPL LANYIA RQN
Sbjct: 295 DLVADKVTYPKLLGIEKSKEFAAKLNKDAQDQLAGFDPVKAAPLIALANYIAYRQN 350
>gi|374639385|gb|AEZ55681.1| geranyl diphosphate synthase large subunit [Salvia miltiorrhiza]
Length = 344
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/322 (59%), Positives = 248/322 (77%), Gaps = 1/322 (0%)
Query: 34 RFKLFSKKIKARHAQNSVFESTDIPLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHK 93
R L S +K R + E + F F+ YM+ KA+ VNKAL+ V ++ P+KIH+
Sbjct: 23 RSGLLSTSVKTRISAVYTKEDKNPTWAAFDFKRYMVEKADSVNKALEAVVQMKEPLKIHE 82
Query: 94 AMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDER 153
+MRYSLLAGGKRVRP+LCIA+CELVGG+ES AMPAACA+EMIHTMSL+HDDLP +DND+
Sbjct: 83 SMRYSLLAGGKRVRPMLCIAACELVGGEESTAMPAACAVEMIHTMSLMHDDLPCMDNDDL 142
Query: 154 RRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLV 213
RR KP +H+VFGE A+LAGDALLSLA EHVAV G +P+R++RA+ ++ ++G EGLV
Sbjct: 143 RRGKPTNHKVFGEDVAVLAGDALLSLAFEHVAVATRGSAPERILRALGQLAKSIGAEGLV 202
Query: 214 AGEFVDIASEG-KDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCI 272
AG+ VDI SEG +V L LE+IH+HKTA LL+ +VV GA++GG EVER+R +A+CI
Sbjct: 203 AGQVVDICSEGMAEVGLDHLEFIHLHKTAALLQGSVVMGAILGGAKEEEVERLRKFAKCI 262
Query: 273 GLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELA 332
GL+FQVVDDILDVTKSS ELGKTAGKDL + K TYPKL+G++ +K FA +L +A E+L
Sbjct: 263 GLMFQVVDDILDVTKSSHELGKTAGKDLVADKTTYPKLLGVQKSKEFADDLNREAQEQLL 322
Query: 333 YFEASKAAPLYFLANYIASRQN 354
+F++ KAAPL +ANYIA R N
Sbjct: 323 HFDSHKAAPLIAIANYIAYRNN 344
>gi|224286499|gb|ACN40956.1| unknown [Picea sitchensis]
Length = 383
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/295 (67%), Positives = 236/295 (80%), Gaps = 2/295 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F+EYM KA VN+ALD AV L+ P KIH+AMRYSLLAGGKRVRP+LCIA+CELVGG
Sbjct: 89 FDFKEYMRSKAMSVNEALDRAVPLRYPEKIHEAMRYSLLAGGKRVRPILCIAACELVGGS 148
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
E AMP ACA+E+IHTMSLIHDDLP +DND+ RR KP +H+VFGE TA+LAGDALLS A
Sbjct: 149 EELAMPTACAMEIIHTMSLIHDDLPPMDNDDLRRGKPTNHKVFGEGTAVLAGDALLSFAF 208
Query: 182 EHVAVNIA-GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHK 239
EH+AV+ + V DRV+R ++E+ A+G EG+ G+ DI S+G V L+ LE+IH+HK
Sbjct: 209 EHIAVSTSKTVESDRVLRVVSELGRAIGSEGVAGGQVADITSQGNPSVGLETLEWIHIHK 268
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
TA LLE +V GA+IGG + E+ERVR YARC+GLLFQVVDDILDVTKSSEELGKTA KD
Sbjct: 269 TAVLLECSVASGAIIGGASDDEIERVRKYARCVGLLFQVVDDILDVTKSSEELGKTAAKD 328
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L S KATYPKLMG+E AK FA ELLG+A EEL++F +KAAPL LA+YIA RQN
Sbjct: 329 LLSDKATYPKLMGLEKAKEFADELLGKAKEELSFFNPTKAAPLLGLADYIAQRQN 383
>gi|269996470|gb|ACZ57571.1| isoprenyl diphosphate synthase [Picea abies]
Length = 383
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/295 (67%), Positives = 236/295 (80%), Gaps = 2/295 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F+EYM KA VN+ALD AV L+ P KIH+AMRYSLLAGGKRVRP+LCIA+CELVGG
Sbjct: 89 FDFKEYMRSKAMSVNEALDRAVPLRYPEKIHEAMRYSLLAGGKRVRPILCIAACELVGGS 148
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
E AMP ACA+E+IHTMSLIHDDLP +DND+ RR KP +H+VFGE TA+LAGDALLS A
Sbjct: 149 EELAMPTACAMEIIHTMSLIHDDLPPMDNDDLRRGKPTNHKVFGEGTAVLAGDALLSFAF 208
Query: 182 EHVAVNIA-GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHK 239
EH+AV+ + V DRV+R ++E+ A+G EG+ G+ DI S+G V L+ LE+IH+HK
Sbjct: 209 EHIAVSTSKTVESDRVLRVVSELGRAIGSEGVAGGQVADITSQGNPSVGLETLEWIHIHK 268
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
TA LLE +V GA+IGG + E+ERVR YARC+GLLFQVVDDILDVTKSSEELGKTA KD
Sbjct: 269 TAVLLECSVASGAIIGGASDDEIERVRKYARCVGLLFQVVDDILDVTKSSEELGKTAAKD 328
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L S KATYPKLMG+E AK FA ELLG+A EEL++F +KAAPL LA+YIA RQN
Sbjct: 329 LLSDKATYPKLMGLEKAKEFADELLGKAKEELSFFNPTKAAPLLGLADYIAQRQN 383
>gi|13431547|sp|Q43133.1|GGPPS_SINAL RecName: Full=Geranylgeranyl pyrophosphate synthase,
chloroplastic/chromoplastic; Short=GGPP synthase;
Short=GGPS; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase; AltName: Full=Dimethylallyltranstransferase;
AltName: Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; Flags: Precursor
gi|1419758|emb|CAA67330.1| geranylgeranyl pyrophosphate synthase [Sinapis alba]
Length = 366
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/297 (66%), Positives = 241/297 (81%), Gaps = 4/297 (1%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F Y+IRKA+ VNKALD AV L+ P+KIH+AMRYSLLAGGKRVRP+LCIA+CELVGG+
Sbjct: 70 FDFMSYIIRKADSVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGE 129
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
ES AMPA CA+EMIHTMSLIHDDLP +DND+ RR KP +H+V+GE A+LAGDALLS A
Sbjct: 130 ESLAMPARCAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLSFAF 189
Query: 182 EHVAVNIAG-VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKD---VSLKELEYIHV 237
EH+A + VSP RVVRA+ E+ A+G EGLVAG+ VDI+SEG D V L+ L++IH+
Sbjct: 190 EHLASATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNNVGLEHLKFIHL 249
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
HKTA LLEA+ V G +IGGG+ E+ER+R +ARCIGLLFQVVDDILDVTKSS+ELGKTAG
Sbjct: 250 HKTAALLEASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVTKSSQELGKTAG 309
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
KDL + K TYPKLMG+E ++ FA +L +A ++L F++ K APL LANYIA+RQN
Sbjct: 310 KDLIADKLTYPKLMGLEKSREFAEKLNTEARDQLLGFDSDKVAPLLALANYIANRQN 366
>gi|116831085|gb|ABK28497.1| unknown [Arabidopsis thaliana]
Length = 348
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/296 (67%), Positives = 238/296 (80%), Gaps = 4/296 (1%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F YMI KA VN+ALD AV L+ P+KIH+A+RYSLLA GKRVRP+LCIA+CELVGG+
Sbjct: 53 FDFTSYMIGKANAVNEALDSAVSLREPIKIHEAIRYSLLARGKRVRPVLCIAACELVGGE 112
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
ES A+PAACA+EMIHTMSLIHDDLP +DND+ RR KP +H+VFGE A+LAGDAL+S A
Sbjct: 113 ESVALPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALISFAF 172
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG---KDVSLKELEYIHVH 238
EH+A + A VSP RVVRAI E+ A+G +GLVAG+ VD+ S G DV L+ LE+IHVH
Sbjct: 173 EHLATSTA-VSPARVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEVLEFIHVH 231
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KTA LLEAA V GA++GGG+ EVE++R +ARCIGLLFQVVDDILDVTKSSEELGKTAGK
Sbjct: 232 KTAVLLEAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGK 291
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
DL + K TYPKLMG+E +K FA +LL A E+L F++S+ PL LANYIA RQN
Sbjct: 292 DLIADKLTYPKLMGLEKSKDFADKLLSDAHEQLHGFDSSRVKPLLALANYIAKRQN 347
>gi|15224197|ref|NP_179452.1| geranylgeranyl diphosphate synthase 7 [Arabidopsis thaliana]
gi|75268021|sp|Q9ZU77.1|GGPP7_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 7,
chloroplastic; Short=GGPP synthase 7; Short=GGPS7;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 7;
AltName: Full=Dimethylallyltranstransferase 7; AltName:
Full=Farnesyl diphosphate synthase 7; AltName:
Full=Farnesyltranstransferase 7; AltName:
Full=Geranyltranstransferase 7; Flags: Precursor
gi|4217998|gb|AAD12206.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|91806194|gb|ABE65825.1| geranylgeranyl pyrophosphate synthase/GGPP
synthetase/farnesyltranstransferase [Arabidopsis
thaliana]
gi|330251692|gb|AEC06786.1| geranylgeranyl diphosphate synthase 7 [Arabidopsis thaliana]
Length = 347
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/296 (67%), Positives = 238/296 (80%), Gaps = 4/296 (1%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F YMI KA VN+ALD AV L+ P+KIH+A+RYSLLA GKRVRP+LCIA+CELVGG+
Sbjct: 53 FDFTSYMIGKANAVNEALDSAVSLREPIKIHEAIRYSLLARGKRVRPVLCIAACELVGGE 112
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
ES A+PAACA+EMIHTMSLIHDDLP +DND+ RR KP +H+VFGE A+LAGDAL+S A
Sbjct: 113 ESVALPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALISFAF 172
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG---KDVSLKELEYIHVH 238
EH+A + A VSP RVVRAI E+ A+G +GLVAG+ VD+ S G DV L+ LE+IHVH
Sbjct: 173 EHLATSTA-VSPARVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEVLEFIHVH 231
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KTA LLEAA V GA++GGG+ EVE++R +ARCIGLLFQVVDDILDVTKSSEELGKTAGK
Sbjct: 232 KTAVLLEAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGK 291
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
DL + K TYPKLMG+E +K FA +LL A E+L F++S+ PL LANYIA RQN
Sbjct: 292 DLIADKLTYPKLMGLEKSKDFADKLLSDAHEQLHGFDSSRVKPLLALANYIAKRQN 347
>gi|4958918|dbj|BAA78046.1| GGPP synthase [Daucus carota]
Length = 366
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/342 (60%), Positives = 255/342 (74%), Gaps = 7/342 (2%)
Query: 15 LFRNPINDFKKSPYRAPIFRFKLFSKKIKARHAQNSVFESTDIPLPTFPFEEYMIRKAEQ 74
L NP +F KS + P S I + V +S+ P TF F+ YM+ KA
Sbjct: 30 LNSNP--NFSKS--KPPQNVIPYSSLSISSVQTTKIVMDSSPTP-STFDFKSYMLEKAIS 84
Query: 75 VNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEM 134
VNKALD +V LQ PVKIH++MRYSLLAGGKRVRPLL IA+CEL GG E+ AMP+ACA+EM
Sbjct: 85 VNKALDASVSLQEPVKIHESMRYSLLAGGKRVRPLLSIAACELFGGHEAVAMPSACAVEM 144
Query: 135 IHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH-VAVNIAGVSP 193
IHTMSL+HDDLPF+DND+ RR KP +H+V+GES A+LAGDA+L+LA H VA GVS
Sbjct: 145 IHTMSLMHDDLPFMDNDDLRRGKPTNHKVYGESVAVLAGDAMLALAAFHLVATETRGVSS 204
Query: 194 DRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKTAKLLEAAVVCGA 252
D+VVR I E+ A+G EGLVAG+ VD+ SEG ++ L++LE+IH KTA LLE +VV GA
Sbjct: 205 DQVVRVIVELAKAIGAEGLVAGQIVDVCSEGDPNLGLEDLEFIHRSKTAALLEGSVVMGA 264
Query: 253 VIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMG 312
++GG N EVE+VR YARCIGLLFQVVDDILDVTKSS+ELGKTAGKDL + K TYPKL+G
Sbjct: 265 ILGGANDEEVEKVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVADKTTYPKLIG 324
Query: 313 IENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
IE ++ F+ EL +AI++LA F + K APL +ANYIA+R N
Sbjct: 325 IEKSREFSDELKREAIDQLAGFNSDKTAPLIAMANYIANRDN 366
>gi|158104429|gb|ABD92926.2| geranylgeranyl diphosphate synthase [Stevia rebaudiana]
Length = 361
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/318 (60%), Positives = 250/318 (78%), Gaps = 2/318 (0%)
Query: 37 LFSKKIKARHAQNSVFESTDIPLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMR 96
+ ++K ++ ++N+ + T + P F F+ YM+ K VN+ALD +V L+ P+KIH++MR
Sbjct: 46 ILTEKHQSNPSENNNLQ-THLETP-FNFDSYMLEKVNMVNEALDASVPLKDPIKIHESMR 103
Query: 97 YSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRS 156
YSLLAGGKR+RP++CIA+CE+VGG+ AMPAACA+EMIHTMSL+HDDLP +DND+ RR
Sbjct: 104 YSLLAGGKRIRPMMCIAACEIVGGNILNAMPAACAVEMIHTMSLVHDDLPCMDNDDFRRG 163
Query: 157 KPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGE 216
KP SH+V+GE A+L GDALLSL+ EH+A GVS DR+VRAI E+ ++G EGLVAG+
Sbjct: 164 KPISHKVYGEEMAVLTGDALLSLSFEHIATATKGVSKDRIVRAIGELARSVGSEGLVAGQ 223
Query: 217 FVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLF 276
VDI SEG DV L LEYIH+HKTA LLE++VV GA++GGG+ ++E++R +AR IGLLF
Sbjct: 224 VVDILSEGADVGLDHLEYIHIHKTAMLLESSVVIGAIMGGGSDQQIEKLRKFARSIGLLF 283
Query: 277 QVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEA 336
QVVDDILDVTKS+EELGKTAGKDL + K TYPKL+GIE ++ FA +L +A E+L+ F+
Sbjct: 284 QVVDDILDVTKSTEELGKTAGKDLLTDKTTYPKLLGIEKSREFAEKLNKEAQEQLSGFDR 343
Query: 337 SKAAPLYFLANYIASRQN 354
KAAPL LANY A RQN
Sbjct: 344 RKAAPLIALANYNAYRQN 361
>gi|58201026|gb|AAW66658.1| geranyl diphosphate synthase [Picrorhiza kurrooa]
Length = 371
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/296 (64%), Positives = 239/296 (80%), Gaps = 1/296 (0%)
Query: 60 PTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
PTF F+ YM++KA+ VNKALD+++ L P+KI ++MRYSLLAGGKR+RP+LCIA+CELVG
Sbjct: 76 PTFDFKSYMLQKADSVNKALDDSIPLTEPLKIQESMRYSLLAGGKRIRPMLCIAACELVG 135
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
GDES AMPAACA+EM+HTMSL+HDDLP +DND+ RR KP +H+VF E A+LAGDA+L+
Sbjct: 136 GDESTAMPAACAVEMVHTMSLMHDDLPCMDNDDLRRGKPTNHKVFTEDVAVLAGDAMLAF 195
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKD-VSLKELEYIHVH 238
+ EHVA GV +R+VR I E+ +G EGLVAG+ VDI SEG D V L+ LE+IH++
Sbjct: 196 SFEHVASLTKGVCSERIVRVIYELAKCVGCEGLVAGQVVDICSEGMDEVGLEHLEFIHLN 255
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KTA LLE +VV GA++GGG+ EVE++RN+ARCIGLLFQVVDDILDVTKSS+ELGKTAGK
Sbjct: 256 KTAALLEGSVVLGAILGGGSDEEVEKLRNFARCIGLLFQVVDDILDVTKSSKELGKTAGK 315
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
DL + K TYPKL+GIE +K FA L +A E LA F+ +KAAPL LA+YIA R N
Sbjct: 316 DLVADKTTYPKLIGIEKSKEFAERLNREAKEHLAGFDQNKAAPLIALADYIAYRDN 371
>gi|413730|gb|AAA32797.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 371
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/299 (65%), Positives = 240/299 (80%), Gaps = 5/299 (1%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
+F F Y+I KAE VNKALD AV L+ P+KIH+AM YSLLAGGKRVRP+LCIA+CELVGG
Sbjct: 73 SFDFMSYIITKAELVNKALDSAVPLREPLKIHEAMSYSLLAGGKRVRPVLCIAACELVGG 132
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
+ES AMPA CA+EMIHTMSLIHDDLP +DND+ RR KP +H+VFGE A+LAGDALLS +
Sbjct: 133 EESTAMPARCAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFS 192
Query: 181 LEHVAVNIAG--VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG---KDVSLKELEYI 235
EH+A + VSP RVVRA+ E+ A+G EGLVAG+ VDI+SEG DV L+ LE+I
Sbjct: 193 FEHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFI 252
Query: 236 HVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKT 295
H+HKTA LLEA+ V GA++GGG+ E+ER+R +ARCIGLLFQVVDDILDVTKSS+ELGKT
Sbjct: 253 HLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKT 312
Query: 296 AGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
AGKDL + K TYPK+MG+E ++ FA +L +A ++L F++ K APL LANYIA RQN
Sbjct: 313 AGKDLIADKLTYPKIMGLEKSREFAEKLNREARDQLLGFDSDKVAPLLALANYIAYRQN 371
>gi|148279681|gb|ABQ53935.1| geranylgeranyl pyrophosphate synthase [Nicotiana attenuata]
Length = 366
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/357 (57%), Positives = 254/357 (71%), Gaps = 7/357 (1%)
Query: 4 SATIPSYGNSTLFRNPINDFKKSPYRAPIFR-----FKLFSKKIKARHAQNSVFESTDIP 58
+A + S N T+ F K P + P F F S A V E+
Sbjct: 11 AAQVCSVFNQTIPNKTFTGFMKIPVKNPSFLKQKRPFSALSVSAIATKEDERVKEA-GTQ 69
Query: 59 LPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELV 118
F F+ Y+ KA VNKALDEAV+++ P I++AMRYSLLAGGKRVRP+LC+A+CELV
Sbjct: 70 KEQFNFKTYVAEKAISVNKALDEAVIVKDPPVIYEAMRYSLLAGGKRVRPMLCLAACELV 129
Query: 119 GGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLS 178
GGD+S AMPAACA+EMIHTMSLIHDDLP +DND+ RR KP +H+V+GE A+LAGD+LL+
Sbjct: 130 GGDQSNAMPAACAVEMIHTMSLIHDDLPCMDNDDIRRGKPTNHKVYGEDVAVLAGDSLLA 189
Query: 179 LALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHV 237
A E +A AGVSP R++ AI E+ ++G EGLVAG+ DIA G +V L LE+IH+
Sbjct: 190 FAFEFIATATAGVSPSRILAAIGELAKSIGTEGLVAGQVADIACTGNPNVGLDTLEFIHI 249
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
HKTA LLEA+VV GA++GGG EVE++R +ARCIGLLFQVVDDILDVTKSSEELGKTAG
Sbjct: 250 HKTAALLEASVVLGAILGGGTDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAG 309
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
KDL K TYPKL+G+E AK FA EL A ++LA F+ KAAPL LA+YIA+RQN
Sbjct: 310 KDLVVDKTTYPKLLGLEKAKEFAAELNRDAKQQLADFDPHKAAPLVALADYIANRQN 366
>gi|56122554|gb|AAV74395.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
palaestina]
Length = 364
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/351 (57%), Positives = 256/351 (72%), Gaps = 6/351 (1%)
Query: 9 SYGNSTLFRNPIND----FKKSPYRAPIFRFKLFSKKIKARHAQNSVFESTDIPLPTFPF 64
SY + TL I F P + F I + + N+ + D + TF F
Sbjct: 15 SYNHGTLTPRSIPSTCFIFHNKPVSPKSTKPLSFKTPISSVYLTNTENKGKDKEM-TFDF 73
Query: 65 EEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW 124
+ Y++ K + VN+ALD A++++ P KIH+AMRYSLLAGGKRVRP+LCIA+ ELVGG+ES
Sbjct: 74 KAYLLEKGKSVNQALDNAILIREPEKIHEAMRYSLLAGGKRVRPILCIAASELVGGNESM 133
Query: 125 AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV 184
AMP+ACA+EMIHTMSLIHDDLP +DND+ RR KP +H+V+GE+ A+LAGDALL+ A E+V
Sbjct: 134 AMPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGENVAVLAGDALLAFAFEYV 193
Query: 185 AVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVHKTAKL 243
A GVSP RVVRAI E+ +G EGLVAG+ VDI S G ++ L LE+IH+HKTA L
Sbjct: 194 ANATVGVSPSRVVRAIGELAKDIGSEGLVAGQVVDILSAGMSNIGLDHLEFIHLHKTAAL 253
Query: 244 LEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASG 303
LEA+VV GA++GGG +VER+R +ARCIGLLFQVVDDILDVT SSEELGKTAGKDL +
Sbjct: 254 LEASVVIGAILGGGTDEQVERLRKFARCIGLLFQVVDDILDVTMSSEELGKTAGKDLVAD 313
Query: 304 KATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
KATYPKL+G+E A+ FA +L +AIE+L F+ +AAPL LA YIA RQN
Sbjct: 314 KATYPKLLGLEKAREFAEKLKNEAIEQLDEFDPEEAAPLLALAEYIAHRQN 364
>gi|21593158|gb|AAM65107.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 371
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/299 (65%), Positives = 240/299 (80%), Gaps = 5/299 (1%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
+F F Y+I KAE VNKALD AV L+ P+KIH+AMRYSLLAGGKRVRP+LCIA+CELVGG
Sbjct: 73 SFDFMSYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGG 132
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
+ES AMPAACA+EMIHTMSLIHDDLP +DND+ RR KP +H+VFGE A+LAGDALLS A
Sbjct: 133 EESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFA 192
Query: 181 LEHVAVNIAG--VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG---KDVSLKELEYI 235
EH+A + VSP RVVRA+ E+ A+G EGLVAG+ VDI+SEG DV L+ LE+I
Sbjct: 193 FEHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFI 252
Query: 236 HVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKT 295
H+HKTA LLEA+ V A++GGG+ E+ER+R +ARCIGLLFQVVDDIL VTKSS+ELGKT
Sbjct: 253 HLHKTAALLEASAVLRAIVGGGSDDEIERLRKFARCIGLLFQVVDDILYVTKSSKELGKT 312
Query: 296 AGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
AGKDL + K TYPK+MG+E ++ FA +L +A ++L F++ K APL LANYIA RQN
Sbjct: 313 AGKDLIADKLTYPKIMGLEKSREFAEKLNREARDQLLGFDSDKVAPLLALANYIAYRQN 371
>gi|426322797|gb|AFY26193.1| geranylgeranyl diphosphate synthase [Picrorhiza kurrooa]
Length = 354
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/338 (57%), Positives = 251/338 (74%), Gaps = 16/338 (4%)
Query: 29 RAPIFRF-----------KLFSKKIKARHAQNSVFESTDIPLPTFPFEEYMIRKAEQVNK 77
R PIF F K + A ++ FE++ PTF F+ YM+ KA VNK
Sbjct: 21 RLPIFLFSNPNSNKFDFINCLQKPVSAILTKDQNFETS----PTFDFKSYMLEKANSVNK 76
Query: 78 ALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHT 137
ALD+++ L P+KIH++MRYSLLAGGKR+RPLLCIA+CELVGG+ES AMPAACA+EM+HT
Sbjct: 77 ALDDSIPLTEPLKIHESMRYSLLAGGKRIRPLLCIAACELVGGEESTAMPAACAVEMVHT 136
Query: 138 MSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVV 197
MSL+HDDLP +DND+ RR KP +H++F E A+LAGDA+L+L+ EHVA + GV +R++
Sbjct: 137 MSLMHDDLPCMDNDDLRRGKPTNHKIFSEDVAVLAGDAMLALSFEHVATSTKGVPSERII 196
Query: 198 RAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVHKTAKLLEAAVVCGAVIGG 256
R I E+ +G EGLVAG+ VDI+SEG V L+ LE+IH +KTA LLE +VV GA++GG
Sbjct: 197 RVIYELAKCIGCEGLVAGQVVDISSEGMTQVGLEHLEFIHSNKTAALLEGSVVLGALLGG 256
Query: 257 GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENA 316
G+ EVE++R +ARCIGLLFQVVDDILDVTKSS+ELGKTAGKDL + K TYPKL+GIE +
Sbjct: 257 GSDEEVEKLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVADKTTYPKLIGIEKS 316
Query: 317 KSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ FA L +A ++L F +KAAPL LANYIA R N
Sbjct: 317 REFAERLNREAQDQLLGFHHNKAAPLIALANYIAYRDN 354
>gi|290575614|gb|ADD49734.1| geranylgeranyl diphosphate synthase [Nicotiana tabacum]
Length = 366
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/357 (57%), Positives = 253/357 (70%), Gaps = 7/357 (1%)
Query: 4 SATIPSYGNSTLFRNPINDFKKSPYRAPIFR-----FKLFSKKIKARHAQNSVFESTDIP 58
+A + S N T+ F K P + P F F S A V E +
Sbjct: 11 AAQVCSVFNQTIPNKTFTGFMKIPVKNPSFLKQKRPFSALSVSAIATKEDEKVKE-VETQ 69
Query: 59 LPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELV 118
F F+ Y+ KA VNKALDEAV+++ P IH+AMRYSLLAGGKRVRP+LC+A+CELV
Sbjct: 70 KEQFNFKTYVAEKAISVNKALDEAVIVKDPPVIHEAMRYSLLAGGKRVRPMLCLAACELV 129
Query: 119 GGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLS 178
GGD+S AMPAACA+EMIHTMSLIHDDLP +DND+ RR KP +H+V+GE A+LAGD+LL+
Sbjct: 130 GGDQSNAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDSLLA 189
Query: 179 LALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHV 237
A E++A AGVSP R++ AI E+ ++G EGLVAG+ DIA G +V L LE+IH+
Sbjct: 190 FAFEYIATATAGVSPSRILAAIGELAKSIGTEGLVAGQVADIACTGNPNVGLDTLEFIHI 249
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
HKTA LLEA+VV GA++GGG EVE++R +ARCIGLLFQVVDDILDVTKSSE LGKTAG
Sbjct: 250 HKTAALLEASVVLGAILGGGTDEEVEKLRIFARCIGLLFQVVDDILDVTKSSEVLGKTAG 309
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
KDLA K TYPKL+G+E AK FA EL A ++L F+ KAAPL LA+YIA R+N
Sbjct: 310 KDLAVDKTTYPKLLGLEKAKEFAAELNRDAKQQLVEFDPHKAAPLIALADYIAYREN 366
>gi|168203181|gb|ACA21461.1| geranylgeranyl diphosphate synthase 5 [Picea abies]
gi|224285639|gb|ACN40538.1| unknown [Picea sitchensis]
Length = 382
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/295 (66%), Positives = 234/295 (79%), Gaps = 2/295 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F+EY++ KA VN+ALD AV L+ P KIH+AMRYSLLAGGKRVRP+LCIA+CELVGG
Sbjct: 88 FDFKEYLLSKAMAVNEALDRAVQLRYPEKIHEAMRYSLLAGGKRVRPVLCIAACELVGGT 147
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
E AMP ACA+EMIHTMSLIHDDLP +DND+ RR KP +H+VFGE TA+LAGDALLS A
Sbjct: 148 EKLAMPTACAMEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKVFGEGTAVLAGDALLSFAF 207
Query: 182 EHVAVNIA-GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHK 239
EH+AV+ + V DR++R ++E+ +G +GLV G+ DI SEG V L LE+IH+HK
Sbjct: 208 EHIAVSTSKSVGSDRILRVVSELGRTIGSQGLVGGQVADITSEGNASVDLDTLEWIHIHK 267
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
TA LLE +VVCGA+I G + E+ERV+ YAR +GLLFQVVDDILDVTKSS+ELGKTAGKD
Sbjct: 268 TAVLLECSVVCGAIISGASENEIERVKRYARSVGLLFQVVDDILDVTKSSKELGKTAGKD 327
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L S KATYPKLMG+E AK FA ELL +A E L+ F+ KAAPL LA+YIA RQN
Sbjct: 328 LISDKATYPKLMGLEKAKQFAVELLDRAKENLSCFDPMKAAPLLGLADYIAFRQN 382
>gi|56122556|gb|AAV74396.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
palaestina]
Length = 310
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/294 (64%), Positives = 237/294 (80%), Gaps = 1/294 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F+ Y++ K + VN+ALD AV+++ P KIH+AMRYSLLAGGKRVRP+LCIA+CELVGG+
Sbjct: 17 FDFKAYLLEKGKSVNQALDNAVLIREPEKIHEAMRYSLLAGGKRVRPILCIAACELVGGN 76
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
ES AMP+ACA+EMIHTMSL+HDDLP +DND+ RR KP +H+V+GE+ A+LAGDALL+ A
Sbjct: 77 ESMAMPSACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVYGENVAVLAGDALLAFAF 136
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVHKT 240
E+VA GVSP RV+RAI E+ +G EGLVAG+ VDI S G ++ L LE+IH+HKT
Sbjct: 137 EYVANATVGVSPSRVIRAIGELAKDIGSEGLVAGQVVDILSAGMSNIGLDHLEFIHLHKT 196
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
A LLEA+VV GA++GGG +VER+R +ARCIGLLFQVVDDILDVT SSEELGKTAGKDL
Sbjct: 197 AALLEASVVIGAILGGGTDEQVERLRKFARCIGLLFQVVDDILDVTMSSEELGKTAGKDL 256
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ KATYPKL+G+E A+ FA +L +A E+L F+ KAAPL LA +IA RQN
Sbjct: 257 VADKATYPKLLGLEKAREFAEKLKNEATEQLDEFDPEKAAPLLALAEFIAHRQN 310
>gi|6449052|gb|AAF08793.1|AF182828_1 geranyl diphosphate synthase large subunit [Mentha x piperita]
gi|10637876|emb|CAC10561.1| gpp synthase large subunit [Mentha x piperita]
gi|158979013|gb|ABW86879.1| geranyl pyrophosphate synthase large subunit [Mentha x piperita]
Length = 377
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/296 (64%), Positives = 233/296 (78%), Gaps = 1/296 (0%)
Query: 60 PTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
P F F+ YM+RKA+ VNKAL+ AV ++ P+KIH++MRYSLLAGGKRVRP+LCIA+CELVG
Sbjct: 82 PAFDFDGYMLRKAKSVNKALEAAVQMKEPLKIHESMRYSLLAGGKRVRPMLCIAACELVG 141
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
GDES AMPAACA+EMIHTMSL+HDDLP +DND+ RR KP +H FGES A+LAGDALLS
Sbjct: 142 GDESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALLSF 201
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVH 238
A EHVA G P+R+VR + E+ ++G EGLVAG+ VD+ SEG +V L LE+IH H
Sbjct: 202 AFEHVAAATKGAPPERIVRVLGELAVSIGSEGLVAGQVVDVCSEGMAEVGLDHLEFIHHH 261
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KTA LL+ +VV GA++GGG EV ++R +A CIGLLFQVVDDILDVTKSS+ELGKTAGK
Sbjct: 262 KTAALLQGSVVLGAILGGGKEEEVAKLRKFANCIGLLFQVVDDILDVTKSSKELGKTAGK 321
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
DL + K TYPKL+G+E +K FA L +A E+L +F +AAPL LANYIA R N
Sbjct: 322 DLVADKTTYPKLIGVEKSKEFADRLNREAQEQLLHFHPHRAAPLIALANYIAYRDN 377
>gi|194272413|gb|ACF37217.1| geranylgeranyl diphosphate synthase [Ipomoea batatas]
Length = 363
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/333 (58%), Positives = 254/333 (76%), Gaps = 11/333 (3%)
Query: 33 FRFKL-FSKKIKAR---HAQNSVF--ESTDIPL----PTFPFEEYMIRKAEQVNKALDEA 82
FR L F I+ + H+ +++ E TD+P F+ Y++ KAE VNKAL+ A
Sbjct: 31 FRINLSFPSSIRKKPVFHSCSAILTKEQTDVPRGGSENKLDFKAYVLGKAESVNKALEAA 90
Query: 83 VVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIH 142
V+L+ P+++H++MRYSLLAGGKR+RP+LCIA+CE+VGGDE+ AMPAACA+EMIHTMSL+H
Sbjct: 91 VLLKEPLRVHESMRYSLLAGGKRIRPMLCIAACEMVGGDEATAMPAACAVEMIHTMSLMH 150
Query: 143 DDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAE 202
DDLP +DND+ RR KP +H+VFGE+ A+LAGDALLS A EH+A GVS +++VR I E
Sbjct: 151 DDLPCMDNDDLRRGKPTNHKVFGENVAVLAGDALLSFAFEHIATATKGVSSEKIVRVIGE 210
Query: 203 MCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIE 261
+ +G EGLVAG+ VDI SEG DV L+ LE+IH+HKTA LLEA+VV GAV+GGG E
Sbjct: 211 LAKCIGAEGLVAGQVVDICSEGISDVGLEHLEFIHLHKTAALLEASVVLGAVLGGGTEEE 270
Query: 262 VERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAG 321
V ++R +AR IGLLFQVVDDILDVTKSS ELGKTAGKDL + K TYPKL+G++ ++ FA
Sbjct: 271 VAKLRKFARNIGLLFQVVDDILDVTKSSHELGKTAGKDLVADKVTYPKLLGLQKSREFAE 330
Query: 322 ELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+L +A +L+ F+ KAAPL LANYIA R+N
Sbjct: 331 QLNKEAQAQLSGFDQGKAAPLIALANYIAYREN 363
>gi|4322331|gb|AAD16018.1| geranylgeranyl diphosphate synthase [Taxus canadensis]
gi|44972242|gb|AAS49033.1| geranylgeranyl diphosphate synthase [Taxus x media]
gi|45505274|gb|AAS67008.1| geranylgeranyl diphosphate synthase [Taxus x media]
gi|86277807|gb|ABC88389.1| geranylgeranyl diphosphate synthase [Taxus wallichiana]
Length = 393
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/295 (65%), Positives = 230/295 (77%), Gaps = 2/295 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F EYM KA V+ ALD+A+ L+ P KIH++MRYSLLAGGKRVRP LCIA+CELVGG
Sbjct: 99 FDFNEYMKSKAVAVDAALDKAIPLEYPEKIHESMRYSLLAGGKRVRPALCIAACELVGGS 158
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
+ AMP ACA+EMIHTMSLIHDDLP +DND+ RR KP +H+VFGE TA+LAGDALLS A
Sbjct: 159 QDLAMPTACAMEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKVFGEDTAVLAGDALLSFAF 218
Query: 182 EHVAVNIAGVSP-DRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHK 239
EH+AV + P DR +R I+E+ +G +GLV G+ VDI SEG +V LK LE+IH+HK
Sbjct: 219 EHIAVATSKTVPSDRTLRVISELGKTIGSQGLVGGQVVDITSEGDANVDLKTLEWIHIHK 278
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
TA LLE +VV G ++GG E+ R+R YARC+GLLFQVVDDILDVTKSSEELGKTAGKD
Sbjct: 279 TAVLLECSVVSGGILGGATEDEIARIRRYARCVGLLFQVVDDILDVTKSSEELGKTAGKD 338
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L + KATYPKLMG+E AK FA EL +A EEL+ F+ KAAPL LA+YIA RQN
Sbjct: 339 LLTDKATYPKLMGLEKAKEFAAELATRAKEELSSFDQIKAAPLLGLADYIAFRQN 393
>gi|121145|sp|P80042.1|GGPPS_CAPAN RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;
Short=GGPP synthase; Short=GGPS; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; Flags: Precursor
gi|643094|emb|CAA56554.1| geranylgeranyl diphosphate synthase [Capsicum annuum]
Length = 369
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/352 (56%), Positives = 253/352 (71%), Gaps = 10/352 (2%)
Query: 12 NSTLFRNPINDFKKSPYRAPIFRFKLFSKK--------IKARHAQNSVFESTDIPLPTFP 63
N TL N F K P + KL K+ A ++ E+ P F
Sbjct: 19 NQTLSYKSFNGFMKIPLKNSKINPKLNKKRPFSPLTVSAIATTKEDERIEAAQTEEP-FN 77
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
F+ Y+ KA VNKALDEA++++ P IH+AMRYSLLAGGKRVRP+LC+A+CELVGG++
Sbjct: 78 FKIYVTEKAISVNKALDEAIIVKEPHVIHEAMRYSLLAGGKRVRPMLCLAACELVGGNQE 137
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
AM AACA+EMIHTMSLIHDDLP +DND+ RR KP +H+++GE A+LAGD+LL+ A EH
Sbjct: 138 NAMAAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDSLLAFAFEH 197
Query: 184 VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKTAK 242
+ + AGV+P R+V A+AE+ ++G EGLVAG+ DI G VSL+ LE+IHVHKTA
Sbjct: 198 IVNSTAGVTPSRIVGAVAELAKSIGTEGLVAGQVADIKCTGNASVSLETLEFIHVHKTAA 257
Query: 243 LLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
LLE++VV GA++GGG +EVE++R +ARCIGLLFQVVDDILDVTKSSEELGKTAGKDL
Sbjct: 258 LLESSVVLGAILGGGTNVEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLVV 317
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TYPKL+G+E AK FA EL +A ++L F++ KAAPL LA+YIA R N
Sbjct: 318 DKTTYPKLLGLEKAKEFAAELNREAKQQLEGFDSRKAAPLIALADYIAYRDN 369
>gi|336359762|gb|AEI53622.1| chloroplast geranylgeranyl diphosphate synthase [Catharanthus
roseus]
Length = 383
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/292 (63%), Positives = 235/292 (80%), Gaps = 1/292 (0%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
F+ YMI KA VNKAL++AV+++ P+KIH++MRYSLLAGGKRVRP+LCIA+CEL GG ES
Sbjct: 92 FKAYMIGKANSVNKALEDAVLVREPLKIHESMRYSLLAGGKRVRPMLCIAACELFGGTES 151
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
AMP+ACA+EMIHTMSL+HDDLP +DND+ RR KP +H+VFGE A+LAGDALL+ A EH
Sbjct: 152 VAMPSACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEH 211
Query: 184 VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVHKTAK 242
+A GVS +R+VR + E+ +G EGLVAG+ VD+ SEG DV L+ LE+IH+HKTA
Sbjct: 212 IATATKGVSSERIVRVVGELAKCIGSEGLVAGQVVDVCSEGIADVGLEHLEFIHIHKTAA 271
Query: 243 LLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
LLE +VV GA++GG N ++ ++R +ARCIGLLFQVVDDILDVTKSS+ELGKTAGKDL +
Sbjct: 272 LLEGSVVLGAIVGGANDEQISKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLVA 331
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TYPKL+GI+ ++ FA +L +A E+LA F+ KAAPL LANYIA R N
Sbjct: 332 DKVTYPKLLGIDKSREFAEKLNREAQEQLAEFDPEKAAPLIALANYIAYRDN 383
>gi|13431546|sp|Q42698.1|GGPPS_CATRO RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;
Short=GGPP synthase; Short=GGPS; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; Flags: Precursor
gi|1063276|emb|CAA63486.1| geranylgeranyl pyrophosphate synthase [Catharanthus roseus]
Length = 357
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/292 (63%), Positives = 235/292 (80%), Gaps = 1/292 (0%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
F+ YMI KA VNKAL++AV+++ P+KIH++MRYSLLAGGKRVRP+LCIA+CEL GG ES
Sbjct: 66 FKAYMIGKANSVNKALEDAVLVREPLKIHESMRYSLLAGGKRVRPMLCIAACELFGGTES 125
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
AMP+ACA+EMIHTMSL+HDDLP +DND+ RR KP +H+VFGE A+LAGDALL+ A EH
Sbjct: 126 VAMPSACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEH 185
Query: 184 VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVHKTAK 242
+A GVS +R+VR + E+ +G EGLVAG+ VD+ SEG DV L+ LE+IH+HKTA
Sbjct: 186 IATATKGVSSERIVRVVGELAKCIGSEGLVAGQVVDVCSEGIADVGLEHLEFIHIHKTAA 245
Query: 243 LLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
LLE +VV GA++GG N ++ ++R +ARCIGLLFQVVDDILDVTKSS+ELGKTAGKDL +
Sbjct: 246 LLEGSVVLGAIVGGANDEQISKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLVA 305
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TYPKL+GI+ ++ FA +L +A E+LA F+ KAAPL LANYIA R N
Sbjct: 306 DKVTYPKLLGIDKSREFAEKLNREAQEQLAEFDPEKAAPLIALANYIAYRDN 357
>gi|148887803|gb|ABR15420.1| geranyl pyrophosphate synthase large subunit [Mentha canadensis]
Length = 377
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/296 (63%), Positives = 232/296 (78%), Gaps = 1/296 (0%)
Query: 60 PTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
P F F+ YM+RKA+ VNKAL+ AV ++ P+KIH++MRYSLLAGGKRVRP+LCIA+CELVG
Sbjct: 82 PAFDFDGYMLRKAKSVNKALEAAVQMKEPLKIHESMRYSLLAGGKRVRPMLCIAACELVG 141
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
GDES AMPAACA+EMIHTMSL+HDDLP +DND+ RR KP +H FGES A+LAGDALLS
Sbjct: 142 GDESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALLSF 201
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVH 238
A EHVA G P+R+VR + E+ ++G EGLVAG+ VD+ SEG +V L LE+IH H
Sbjct: 202 AFEHVAAATKGAPPERIVRVLGELAVSVGSEGLVAGQVVDVCSEGMAEVGLDHLEFIHHH 261
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KTA LL+ +VV GA++GGGN EV ++R +A CIGLLFQVVDDILDVTKSS+ELGK AGK
Sbjct: 262 KTAALLQGSVVLGAILGGGNEEEVAKLRKFANCIGLLFQVVDDILDVTKSSKELGKKAGK 321
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
DL + K TYPKL+G+E + FA L +A E+L +F +AAPL LANYIA R N
Sbjct: 322 DLVADKTTYPKLIGVEKSMEFADRLNREAQEQLLHFHPHRAAPLIALANYIAYRDN 377
>gi|380039815|gb|AFD32422.1| geranylgeranyl diphosphate synthase [Taxus x media]
Length = 393
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/295 (65%), Positives = 230/295 (77%), Gaps = 2/295 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F E+M KA V+ ALD+A+ L+ P KIH+ MRYSLLAGGKRVRP LCIA+CELVGG
Sbjct: 99 FDFNEHMKSKAVAVDAALDKAIPLEYPEKIHEPMRYSLLAGGKRVRPALCIAACELVGGS 158
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
+ AMP ACA+EMIHTMSLIHDDLP +DND+ RR KP +H+VFGE TA+LAGDALLS A
Sbjct: 159 QDLAMPTACAMEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKVFGEDTAVLAGDALLSFAF 218
Query: 182 EHVAVNIAGVSP-DRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHK 239
EH+AV + P DR +R I+E+ +G +GLV G+ VDIASEG +V LK LE+IH+HK
Sbjct: 219 EHIAVATSKTVPSDRTLRVISELGKTIGSQGLVGGQVVDIASEGDANVDLKTLEWIHIHK 278
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
TA LLE +VV G ++GG E+ R+R YARC+GLLFQVVDDILDVTKSSEELGKTAGKD
Sbjct: 279 TAVLLECSVVSGGILGGATEDEIARIRRYARCVGLLFQVVDDILDVTKSSEELGKTAGKD 338
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L + KATYPKLMG+E AK FA EL +A EEL+ F+ KAAPL LA+YIA RQN
Sbjct: 339 LLTDKATYPKLMGLEKAKEFAAELATRAKEELSSFDQIKAAPLLGLADYIAFRQN 393
>gi|297802274|ref|XP_002869021.1| hypothetical protein ARALYDRAFT_490952 [Arabidopsis lyrata subsp.
lyrata]
gi|297314857|gb|EFH45280.1| hypothetical protein ARALYDRAFT_490952 [Arabidopsis lyrata subsp.
lyrata]
Length = 379
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/299 (67%), Positives = 244/299 (81%), Gaps = 5/299 (1%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
+F F Y+I KAE VNKALD AV L+ P+KIH+AMRYSLLAGGKRVRP+LCIA+CELVGG
Sbjct: 81 SFDFMSYIITKAESVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGG 140
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
+ES AMPAACA+EMIHTMSLIHDDLP +DND+ RR KP +H+VFGE A+LAGDALLS A
Sbjct: 141 EESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFA 200
Query: 181 LEHVAVNIAG--VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG---KDVSLKELEYI 235
EH+A + VSP RVVRAI E+ A+G EGLVAG+ VDI+SEG DV L+ LE+I
Sbjct: 201 FEHLASATSSDVVSPVRVVRAIGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFI 260
Query: 236 HVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKT 295
H+HKTA LLEA+ V GA++GGG+ E+ER+R +ARCIGLLFQVVDDILDVTKSS+ELGKT
Sbjct: 261 HLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKT 320
Query: 296 AGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
AGKDL + K TYPK+MG+E ++ FA +L +A ++L F+++KAAPL LANYIA RQN
Sbjct: 321 AGKDLIADKLTYPKIMGLEKSREFADKLNREARDQLLGFDSAKAAPLLALANYIAYRQN 379
>gi|289526777|pdb|3KRA|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium
gi|289526780|pdb|3KRA|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium
gi|289526781|pdb|3KRC|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ipp
gi|289526784|pdb|3KRC|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ipp
gi|289526785|pdb|3KRF|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (I)
gi|289526788|pdb|3KRF|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (I)
gi|289526789|pdb|3KRO|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (Ii)
gi|289526792|pdb|3KRO|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (Ii)
gi|289526793|pdb|3KRP|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium And Gpp
gi|289526796|pdb|3KRP|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium And Gpp
gi|310942863|pdb|3OAB|A Chain A, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942866|pdb|3OAB|D Chain D, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942867|pdb|3OAC|A Chain A, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942870|pdb|3OAC|D Chain D, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
Length = 295
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/294 (64%), Positives = 232/294 (78%), Gaps = 1/294 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F+ YM+RKA+ VNKAL+ AV ++ P+KIH++MRYSLLAGGKRVRP+LCIA+CELVGGD
Sbjct: 2 FDFDGYMLRKAKSVNKALEAAVQMKEPLKIHESMRYSLLAGGKRVRPMLCIAACELVGGD 61
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
ES AMPAACA+EMIHTMSL+HDDLP +DND+ RR KP +H FGES A+LAGDALLS A
Sbjct: 62 ESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALLSFAF 121
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVHKT 240
EHVA G P+R+VR + E+ ++G EGLVAG+ VD+ SEG +V L LE+IH HKT
Sbjct: 122 EHVAAATKGAPPERIVRVLGELAVSIGSEGLVAGQVVDVCSEGMAEVGLDHLEFIHHHKT 181
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
A LL+ +VV GA++GGG EV ++R +A CIGLLFQVVDDILDVTKSS+ELGKTAGKDL
Sbjct: 182 AALLQGSVVLGAILGGGKEEEVAKLRKFANCIGLLFQVVDDILDVTKSSKELGKTAGKDL 241
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K TYPKL+G+E +K FA L +A E+L +F +AAPL LANYIA R N
Sbjct: 242 VADKTTYPKLIGVEKSKEFADRLNREAQEQLLHFHPHRAAPLIALANYIAYRDN 295
>gi|255568243|ref|XP_002525096.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
gi|223535555|gb|EEF37223.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
Length = 369
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/331 (63%), Positives = 255/331 (77%), Gaps = 5/331 (1%)
Query: 26 SPYRAPI-FRFKLFSKKIKARHAQNSVFESTDIPLPTFPFEEYMIRKAEQVNKALDEAVV 84
S R PI F + +K+ K + F S PTF F+ YM++KA +N+ALD AV
Sbjct: 42 SKSRKPISFIAAIITKEEKTLQEEQDNFNSRP---PTFDFKSYMLQKAASINQALDAAVP 98
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
++ P KIH++MRYSLLAGGKRVRP LC+A+CELVGG+ES AMPAACA+EMIHTMSLIHDD
Sbjct: 99 IREPTKIHESMRYSLLAGGKRVRPALCLAACELVGGNESMAMPAACAVEMIHTMSLIHDD 158
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMC 204
LP +DND+ RR KP +H VFGE A+LAGDALL+LA EH+A+ VSP R+VRA+ E+
Sbjct: 159 LPCMDNDDLRRGKPTNHIVFGEDVAVLAGDALLALAFEHIAIATLNVSPARIVRAVGELA 218
Query: 205 SAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A+G EGLVAG+ VDI SEG +V L++LE+IHVHKTAKLLE AVV GA++GGG EVE
Sbjct: 219 KAIGAEGLVAGQVVDICSEGLSEVGLEKLEFIHVHKTAKLLEGAVVLGAIMGGGTDEEVE 278
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++R YAR IGLLFQVVDDILDVTKSS+ELGKTAGKDL + K TYPKLMGI+ ++ FA +L
Sbjct: 279 KLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLMGIDKSREFAEKL 338
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+A E+LA F+ KAAPL LANYIA RQN
Sbjct: 339 NKEAQEQLAGFDPEKAAPLIALANYIAYRQN 369
>gi|6277256|dbj|BAA86285.1| geranylgeranyl pyrophosphate synthase [Scoparia dulcis]
Length = 351
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/352 (56%), Positives = 255/352 (72%), Gaps = 20/352 (5%)
Query: 18 NPINDFKKSPYRAPIFR--------------FKLFSKKIKARHAQNSVFESTDIPLPTFP 63
NP++ + +P R+ +FR F K I A + +++ TF
Sbjct: 5 NPVSTWP-NPTRSSVFRPKPAILNTTHLPISFLFAGKPISAVLTKEYSHQTSS----TFD 59
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
F++YM+ KA VNKAL+ AV L+ P+KIH++MRYSLLAGGKRVRP+LC+A+CELVGG S
Sbjct: 60 FKKYMLEKASSVNKALESAVSLKEPLKIHESMRYSLLAGGKRVRPMLCLAACELVGGHPS 119
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
AMPAAC++EMIHTMSL+HDDLP +DND RR P +H VFGE A+LAGDALL+ + E+
Sbjct: 120 TAMPAACSIEMIHTMSLMHDDLPCMDNDHLRRGHPTNHIVFGEDVAVLAGDALLAYSFEY 179
Query: 184 VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVHKTAK 242
+A GV P+R+VR IAE+ + EGL+AG+ VDI SEG ++ L+ LEYIH+HKTA
Sbjct: 180 LATATEGVLPERIVRVIAELAKCIRSEGLLAGQVVDICSEGVSEIGLEHLEYIHLHKTAA 239
Query: 243 LLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
LLE +VV GA++GGGN EVER+R +ARCIGLLFQVVDDILDVTK+S ELGKTAGKDL +
Sbjct: 240 LLEGSVVLGAILGGGNDEEVERLRKFARCIGLLFQVVDDILDVTKTSVELGKTAGKDLVA 299
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TYPKL+GIE ++ FA +L +A E+L F++ KAAPL LANYIA R+N
Sbjct: 300 DKTTYPKLIGIEKSREFAEKLNREAQEQLVGFDSDKAAPLIALANYIAYREN 351
>gi|3885426|gb|AAC77874.1| geranylgeranyl pyrophosphate synthase [Helianthus annuus]
Length = 356
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/346 (57%), Positives = 257/346 (74%), Gaps = 6/346 (1%)
Query: 11 GNSTLFRNPINDFKKSPYRAPIFRFKLFSKKIKARHAQNSVFESTDIPLPTFPFEEYMIR 70
G+S + PIN+ K ++ I + I A + V E P PTF F YM+
Sbjct: 15 GSSFIKTTPINN--KPTFK--IHQRPTIRSTISAAIVEEEVVELQQKPKPTFNFNAYMLG 70
Query: 71 KAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAAC 130
K V+KALDE+++++ P IH+AMRYSLLAGGKRVRP+LCIA+CELVGG+E+ AMPAAC
Sbjct: 71 KGNSVHKALDESIMIKNPPTIHEAMRYSLLAGGKRVRPILCIAACELVGGEEATAMPAAC 130
Query: 131 ALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAG 190
A+EMIHTMSLIHDDLP +DND+ RR KP +H+V+GE A+LAGD+LL+ A E+V+ G
Sbjct: 131 AVEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKVYGEDVAVLAGDSLLAFAFEYVSSRTEG 190
Query: 191 VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASE-GKDVSLKELEYIHVHKTAKLLEAAVV 249
SP RV+ AI E+ ++G EGLVAG+ VDIAS G+D+ L +LE+IH+HKTA LLEA+VV
Sbjct: 191 ASPARVLAAIGELAKSIGTEGLVAGQVVDIASTGGQDIGLDQLEFIHIHKTAALLEASVV 250
Query: 250 CGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPK 309
GA++GGG+ +VE++R +ARCIGLLFQVVDDILDVTKSSEELGKTAGKDL K TYPK
Sbjct: 251 LGAILGGGSDAQVEKLRTFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLLVDKTTYPK 310
Query: 310 LMGIENAKSFAGELLGQAIEELAYFEAS-KAAPLYFLANYIASRQN 354
L+G++ ++ FA ELL +A ++L FE+ APL LA YIA RQN
Sbjct: 311 LLGLDKSRQFAEELLAEAKQQLEEFESQAAVAPLLALAEYIAYRQN 356
>gi|307950755|gb|ACA21458.2| geranyl diphosphate synthase 2 [Picea abies]
Length = 386
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/295 (63%), Positives = 239/295 (81%), Gaps = 2/295 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F++YM KA VN+ALD+ + + P KI+++MRYSLLAGGKRVRP+LCIA+CEL+GG
Sbjct: 92 FDFDKYMHSKAIAVNEALDKVIPPRYPQKIYESMRYSLLAGGKRVRPILCIAACELMGGT 151
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
E AMP ACA+EMIHTMSLIHDDLP++DND+ RR KP +H+VFGE TAI+AGDALLSLA
Sbjct: 152 EELAMPTACAIEMIHTMSLIHDDLPYIDNDDLRRGKPTNHKVFGEDTAIIAGDALLSLAF 211
Query: 182 EHVAVNIA-GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHK 239
EHVAV+ + + D ++R ++E+ A G EG++ G+ VDI SEG + L+ LE++H+HK
Sbjct: 212 EHVAVSTSRTLGTDIILRLLSEIGRATGSEGVMGGQVVDIESEGDPSIDLETLEWVHIHK 271
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
TA LLE +VVCGA++GG + ++ER R YARC+GLLFQVVDDILDV++SSEELGKTAGKD
Sbjct: 272 TAVLLECSVVCGAIMGGASEDDIERARRYARCVGLLFQVVDDILDVSQSSEELGKTAGKD 331
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L S KATYPKLMG+E AK FA ELL + +EL+ F+ +KAAPL+ LA+YIASRQN
Sbjct: 332 LISDKATYPKLMGLEKAKEFADELLNRGKQELSCFDPTKAAPLFALADYIASRQN 386
>gi|17352451|gb|AAL17614.2|AF425235_1 geranylgeranyl diphosphate synthase [Abies grandis]
Length = 383
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/314 (61%), Positives = 243/314 (77%), Gaps = 8/314 (2%)
Query: 49 NSVFESTDIP------LPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAG 102
N++ + T++P + F F+EY+ KA VN+ALD AV L+ P +IH+AMRYSLLAG
Sbjct: 70 NTIAKFTNLPEKVKEKVIEFDFKEYLRSKAMAVNEALDRAVPLRYPERIHEAMRYSLLAG 129
Query: 103 GKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHE 162
GKRVRP+LCI++CELVGG E AMP ACA+EMIHTMSLIHDDLP +DND+ RR KP +H+
Sbjct: 130 GKRVRPVLCISACELVGGTEEVAMPTACAMEMIHTMSLIHDDLPCMDNDDFRRGKPTNHK 189
Query: 163 VFGESTAILAGDALLSLALEHVAVNIA-GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIA 221
VFGE TAILAGDALLS A EH+AV+ + V DR++R ++E+ +G +GLV G+ DI
Sbjct: 190 VFGEGTAILAGDALLSFAFEHIAVSTSKSVGTDRILRVVSELGRTIGSQGLVGGQVADIT 249
Query: 222 SEGK-DVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVD 280
SEG V L LE+IH+HKTA LLE +V+CGA+I G + E+ER++ YAR +GLLFQVVD
Sbjct: 250 SEGDASVDLDTLEWIHIHKTAVLLECSVMCGAIISGASDNEIERIQRYARSVGLLFQVVD 309
Query: 281 DILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAA 340
DILDVTKSS+ELGKTAGKDL S KATYPKLMG+E AK FA +LL +A E+L+ F+ KAA
Sbjct: 310 DILDVTKSSKELGKTAGKDLISDKATYPKLMGLEKAKQFASDLLIRAKEDLSCFDPMKAA 369
Query: 341 PLYFLANYIASRQN 354
PL LA+YIA RQN
Sbjct: 370 PLLGLADYIAFRQN 383
>gi|168203183|gb|ACA21462.1| geranylgeranyl diphosphate synthase 6 [Picea abies]
Length = 385
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/294 (63%), Positives = 234/294 (79%), Gaps = 1/294 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F++YM KA +N+ALD+ V L+ P KIH+AMRYSLLAGGKRVRP+LCIASCELVGG
Sbjct: 92 FEFKKYMFSKANAINEALDKCVSLRHPEKIHEAMRYSLLAGGKRVRPILCIASCELVGGS 151
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
E MP+ACA+EMIHTMSLIHDDLP +DND+ RR KP +H+VFGE A+LAGDALL+ A
Sbjct: 152 EESVMPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAF 211
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVHKT 240
EH+A + GV ++V+R I E+ A+G EGLVAG+ VD++S G +V L LEYIHVHKT
Sbjct: 212 EHIACSTKGVEAEKVLRVIWELGRAIGSEGLVAGQVVDLSSGGLSNVGLDLLEYIHVHKT 271
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
A LLE +VV GA+IGGG+ E+ER+R +ARCIGL+FQVVDDILDVTKSS+ELGKTA KDL
Sbjct: 272 AALLEGSVVIGAIIGGGSDEEIERLRRFARCIGLMFQVVDDILDVTKSSQELGKTACKDL 331
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K TYPKL+G+E ++ FA EL QA+++++ F+ KA PL LA+YIA RQN
Sbjct: 332 VADKLTYPKLLGLEKSREFAQELNKQAMDQISVFDVEKAKPLICLADYIAHRQN 385
>gi|558925|gb|AAA86688.1| geranylgeranyl pyrophosphate synthase [Lupinus albus]
Length = 316
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/296 (63%), Positives = 238/296 (80%), Gaps = 1/296 (0%)
Query: 60 PTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
P F F YM+ K+ VN+AL++AV L+ P KIH+AMRYSLLAGGKRVRP+LCIA+CE+VG
Sbjct: 21 PRFNFNLYMVEKSRSVNQALNDAVSLREPHKIHEAMRYSLLAGGKRVRPVLCIAACEVVG 80
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
G+ES AM AAC++EMIHTMSLIHDDLP +DND+ RR KP +H+VFGE+ A+LAGDALL+
Sbjct: 81 GNESTAMAAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGENIAVLAGDALLAF 140
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVH 238
A EH+AV+ +GVSP+R++ AI E+ ++G EGLVAG+ VDI SEG D+ L++LE+IH+H
Sbjct: 141 AFEHIAVSTSGVSPERIIGAIGELAKSIGTEGLVAGQVVDINSEGLCDIGLEKLEFIHLH 200
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KTA LLE +VV GA++GGG EVE++R +AR IGL+FQVVDD+LDVTKSS+ELGKTAGK
Sbjct: 201 KTAALLEGSVVVGAILGGGCNEEVEKLRMFARYIGLMFQVVDDVLDVTKSSKELGKTAGK 260
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
DL + K TYPKL+GIE + FA +L A E+L+ F+ K APL LANYIA N
Sbjct: 261 DLVADKVTYPKLLGIEKSNEFAQKLNRDAQEQLSGFDPVKVAPLIALANYIAYSPN 316
>gi|237783596|gb|ACR19637.1| geranylgeranyl diphosphate synthase [Salvia miltiorrhiza]
Length = 364
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/355 (55%), Positives = 257/355 (72%), Gaps = 15/355 (4%)
Query: 12 NSTLFRNP-----INDFKKSPYRAPIFRFKLFSKKIKARHAQNSVFESTDIPLPT----- 61
N ++F+ P + F P P+F L S+K + H ++V + + T
Sbjct: 13 NLSIFKQPCPSKSLVGFIHHPRFEPVF---LKSRKRISSHGVSAVLTGEEARVSTQRDDA 69
Query: 62 -FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
F F Y++ KA VNKALD+AV ++ P IH AMRYSLLAGGKRVRP+LCIA+CE+VGG
Sbjct: 70 PFNFNAYVVEKANHVNKALDDAVAVRNPPMIHDAMRYSLLAGGKRVRPMLCIAACEIVGG 129
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
+S A+PAACA+EMIHTMSLIHDDLP +DND+ RR KP +H+VFGE A+LAGDALL+ A
Sbjct: 130 PQSAAIPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFA 189
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHK 239
E +A GV+P+R++ A+ E+ A+G EGLVAG+ VD+ G +V L LE+IH+HK
Sbjct: 190 FEFMATATTGVAPERILAAVGELAKAIGTEGLVAGQVVDLNCTGDANVGLDTLEFIHIHK 249
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
TA LLEA+VV GA++GGG++ ++E++R +AR IGLLFQVVDDILDVTKSSEELGKTAGKD
Sbjct: 250 TAALLEASVVLGAILGGGSSDQIEKLRTFARKIGLLFQVVDDILDVTKSSEELGKTAGKD 309
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
LA K TYPKL+G++ A FA +L +A +LA F+ SKAAPL LA+YIA RQN
Sbjct: 310 LAVDKTTYPKLLGLDKAMEFAEKLNEEAKAQLAGFDPSKAAPLTALADYIAHRQN 364
>gi|376372994|gb|AFB35651.1| chloroplast geranylgeranyl diphosphate synthase 3 [Nicotiana
tabacum]
Length = 363
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/363 (56%), Positives = 262/363 (72%), Gaps = 9/363 (2%)
Query: 1 MAVSATIPSYGNS--TLFRNPINDFKKSPYRAPIFRFKLFSKK-----IKAR-HAQNSVF 52
M++S I ++GN+ L N + F + P + K ++ I A +
Sbjct: 1 MSLSTAITTWGNTHFALGNNGRSRFSSHGFLLPNLKIKFYTNNPSPLSISALLTTKQQTD 60
Query: 53 ESTDIPLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCI 112
ES + F EY++ KA VNKAL+ +V+++ PVKIH++MRYSLLAGGKR+RP+LCI
Sbjct: 61 ESKNKKKQAMEFNEYVLEKANSVNKALESSVLIKDPVKIHESMRYSLLAGGKRIRPMLCI 120
Query: 113 ASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILA 172
ASCELVGGDES AMPAACA+EMIHTMSLIHDDLP +DND+ RR KP +H+++GE A+LA
Sbjct: 121 ASCELVGGDESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLA 180
Query: 173 GDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKE 231
GDALL+LA EH+A GV R+VR I E+ +G E LVAG+ VDI SEG DV LK
Sbjct: 181 GDALLALAFEHIATQTKGVPSHRIVRVIGELAKCIGAERLVAGQVVDIISEGISDVDLKH 240
Query: 232 LEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEE 291
LE+IH+HKTA LLE +VV GA++GG +A EVE++R +ARCIGLLFQVVDDILDVTKSS++
Sbjct: 241 LEFIHLHKTAALLEGSVVLGAILGGADAEEVEKLRKFARCIGLLFQVVDDILDVTKSSQQ 300
Query: 292 LGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIAS 351
LGKTAGKDL + K TYPKL+GI+ ++ FA EL +A +LA F+ KAAPL LANYIA
Sbjct: 301 LGKTAGKDLVADKVTYPKLIGIDKSRDFAEELNKEAQAQLAGFDQEKAAPLIALANYIAY 360
Query: 352 RQN 354
R+N
Sbjct: 361 REN 363
>gi|167999215|ref|XP_001752313.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696708|gb|EDQ83046.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 288
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/288 (65%), Positives = 231/288 (80%), Gaps = 1/288 (0%)
Query: 68 MIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMP 127
M KA+ VN ALD+AV +Q P KI +AMRYSLLAGGKRVRP LCIA+CELVGG+E +MP
Sbjct: 1 MKSKAQAVNVALDKAVPMQYPEKIREAMRYSLLAGGKRVRPALCIAACELVGGNEEMSMP 60
Query: 128 AACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVN 187
AACA+EM+HTMSLIHDDLP +DND+ RR KP +H+VFGE TA+LAGDALL+ A EH+A +
Sbjct: 61 AACAMEMVHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDTAVLAGDALLTYAFEHIARD 120
Query: 188 IAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKTAKLLEA 246
GV DRV+R IA + A+G EGLVAG+ VDIASEG V L+ LEY+H HKTA LLE+
Sbjct: 121 TTGVPADRVLRVIAHLGKAVGSEGLVAGQIVDIASEGDPTVGLETLEYVHTHKTAVLLES 180
Query: 247 AVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKAT 306
+VVCGA++GG + E+ R+ YAR +GLLFQVVDDILDVTKSS ELGKTAGKDL + KAT
Sbjct: 181 SVVCGAILGGASEDEISRLSKYARNVGLLFQVVDDILDVTKSSAELGKTAGKDLLADKAT 240
Query: 307 YPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
YPKL+G+E +K+FA EL +A ++L+ F+ KAAPL LA+YIA RQN
Sbjct: 241 YPKLLGLEKSKAFAEELTRKAKDQLSVFDQQKAAPLLGLADYIAYRQN 288
>gi|14422402|dbj|BAB60820.1| putative GGPP synthase [Eucommia ulmoides]
Length = 288
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/288 (64%), Positives = 230/288 (79%), Gaps = 1/288 (0%)
Query: 68 MIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMP 127
M+ KA+ VNKAL+ V+L+ P+KIH++MRYS+LAGGKRVRPLLCIA+CELVGG ES AMP
Sbjct: 1 MLGKADSVNKALEATVLLRYPIKIHESMRYSILAGGKRVRPLLCIAACELVGGQESTAMP 60
Query: 128 AACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVN 187
AACA+EMIHTMSL+HDDLP +DND+ RR KP +H VFGE A+LAGD+LL+ A E +A +
Sbjct: 61 AACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMVFGEDVAVLAGDSLLAFAFELIATS 120
Query: 188 IAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVHKTAKLLEA 246
GV DR+VR I E+ ++G EGLVAG+ +DI SEG DV L+ LE+IHVHKTA LLE
Sbjct: 121 TTGVPADRIVRVIGELAKSIGSEGLVAGQVIDICSEGMTDVGLEHLEFIHVHKTAALLEG 180
Query: 247 AVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKAT 306
+VV GA++GG EVE++R +ARCIG LFQVVDDILDVTKSS+ELGKTAGKDL + K T
Sbjct: 181 SVVLGAILGGATDPEVEKLRKFARCIGFLFQVVDDILDVTKSSQELGKTAGKDLVADKTT 240
Query: 307 YPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
YPKL+G+E ++ FA +L +A ++LA F+ KAAPL LANYIA R N
Sbjct: 241 YPKLIGLEKSREFAEKLNREAQDQLAAFDIEKAAPLIALANYIAYRNN 288
>gi|22535959|gb|AAN01134.1| geranyl diphosphate synthase [Abies grandis]
Length = 381
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/295 (63%), Positives = 235/295 (79%), Gaps = 2/295 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F +YM KA VN+AL++A+ L+ P KI+++MRYSLLAGGKRVRP+LCIA+CELVGG
Sbjct: 87 FDFNKYMDSKAMTVNEALNKAIPLRYPQKIYESMRYSLLAGGKRVRPVLCIAACELVGGT 146
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
E A+P ACA+EMIHTMSL+HDDLP +DND+ RR KP +H++FGE TA+ AG+AL S A
Sbjct: 147 EELAIPTACAIEMIHTMSLMHDDLPCIDNDDLRRGKPTNHKIFGEDTAVTAGNALHSYAF 206
Query: 182 EHVAVNIA-GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHK 239
EH+AV+ + V DR++R ++E+ A G EG++ G+ VDIASEG + L+ LE+IH+HK
Sbjct: 207 EHIAVSTSKTVGADRILRMVSELGRATGSEGVMGGQMVDIASEGDPSIDLQTLEWIHIHK 266
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
TA LLE +VVCGA+IGG + I +ER R YARC+GLLFQVVDDILDVTKSS+ELGKTAGKD
Sbjct: 267 TAMLLECSVVCGAIIGGASEIVIERARRYARCVGLLFQVVDDILDVTKSSDELGKTAGKD 326
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L S KATYPKLMG+E AK F+ ELL +A EL+ F+ KAAPL LA+Y+A RQN
Sbjct: 327 LISDKATYPKLMGLEKAKEFSDELLNRAKGELSCFDPVKAAPLLGLADYVAFRQN 381
>gi|22535957|gb|AAN01133.1| geranyl diphosphate synthase [Abies grandis]
Length = 383
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/295 (65%), Positives = 231/295 (78%), Gaps = 2/295 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F+EY+ KA VN+AL+ AV L+ P KIH+AMRYSLLAGGKR+RP+L IA+CELVGG
Sbjct: 89 FDFKEYLHSKAISVNEALERAVPLRYPEKIHEAMRYSLLAGGKRIRPILTIAACELVGGS 148
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
E AMP ACA+EMIHTMSLIHDDLP +DND+ RR K +H+VFGE TA+LAGDALLS A
Sbjct: 149 EELAMPTACAMEMIHTMSLIHDDLPSMDNDDLRRGKLTNHKVFGEGTAVLAGDALLSFAF 208
Query: 182 EHVAVNI-AGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHK 239
EH+AV+ V+ RV+R ++E+ A+G +G+ G+ DI SEG V L+ LE+IH+HK
Sbjct: 209 EHIAVSTRKTVASHRVLRVVSELGKAIGSQGVAGGQVADITSEGDPSVGLETLEWIHIHK 268
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
TA LLE AVV GA+IGG + E+ER YARC+GLLFQVVDDILDVT+SSEELGKTAGKD
Sbjct: 269 TAVLLECAVVSGAIIGGASENEIERTGRYARCVGLLFQVVDDILDVTRSSEELGKTAGKD 328
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L S KATYPKLMG+E AK FA ELL +A EEL+ F +KAAPL LA+YIA RQN
Sbjct: 329 LVSDKATYPKLMGLEKAKEFADELLDRAKEELSCFNPAKAAPLLGLADYIALRQN 383
>gi|215433848|gb|ACJ66778.1| geranylgeranyl diphosphate synthase [Salvia miltiorrhiza]
Length = 364
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/355 (54%), Positives = 256/355 (72%), Gaps = 15/355 (4%)
Query: 12 NSTLFRNP-----INDFKKSPYRAPIFRFKLFSKKIKARHAQNSVFESTDIPLPT----- 61
N ++F+ P + F P P+F L S++ + H ++V + + T
Sbjct: 13 NLSIFKQPCPSKSLVGFTHHPRFEPVF---LKSRRRISSHGVSAVLTGEEARVSTQRDDA 69
Query: 62 -FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
F F Y++ KA VNKALD+AV ++ P IH AMRYSLLAGGKRVRP+LCIA+CE+VGG
Sbjct: 70 PFNFNAYVVEKANHVNKALDDAVAVRNPPMIHDAMRYSLLAGGKRVRPMLCIAACEIVGG 129
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
+S A+PAACA+EMIHTMSLIHDDLP +DND+ RR KP +H+VFG+ A+LAGDALL+ A
Sbjct: 130 PQSAAIPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGKDVAVLAGDALLAFA 189
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHK 239
E +A GV+P+R++ A+ E+ A+G EGLVAG+ VD+ G +V L LE+IH+HK
Sbjct: 190 FEFMATATTGVAPERILAAVGELAKAIGTEGLVAGQVVDLNCTGDANVGLDTLEFIHIHK 249
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
TA LLEA+VV GA++GGG++ ++E++R +AR IGLL QVVDDILDVTKSSEELGKTAGKD
Sbjct: 250 TAALLEASVVLGAILGGGSSDQIEKLRTFARKIGLLLQVVDDILDVTKSSEELGKTAGKD 309
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
LA K TYPKL+G++ A FA +L +A +LA F+ SKAAPL LA+YIA RQN
Sbjct: 310 LAVDKTTYPKLLGLDKAVEFAEKLNEEAKAQLAGFDPSKAAPLTALADYIAHRQN 364
>gi|224285135|gb|ACN40295.1| unknown [Picea sitchensis]
Length = 382
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/295 (61%), Positives = 236/295 (80%), Gaps = 2/295 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F +YM KA VN+ALD AV L+ P K+H++MRYS+L+GGKRVRP+LCIA+CELVGG
Sbjct: 88 FDFNKYMHAKAISVNQALDRAVPLRFPQKLHESMRYSILSGGKRVRPVLCIAACELVGGT 147
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
E AMP ACA+EMIH M+L+HDD+P LDND+ RR KP +H+VFGE TA++AG ALLS+A
Sbjct: 148 EELAMPIACAIEMIHVMTLLHDDMPCLDNDDIRRGKPTNHKVFGEGTALIAGVALLSVAF 207
Query: 182 EHVAVNIA-GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHK 239
EH+AV+ + V DR++R ++E+ G +G++ G+F+D+ SEG V+L+ L++IH HK
Sbjct: 208 EHIAVSTSKTVGNDRILRMVSELGRTTGSQGIMGGQFLDLVSEGDASVNLQTLQWIHAHK 267
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
TA LLE++VVCGA+IGG + E+ER+R YA C+G+LFQVVDDILDVTKSSEELGKTAGKD
Sbjct: 268 TAVLLESSVVCGAIIGGASEDEIERIRRYASCVGILFQVVDDILDVTKSSEELGKTAGKD 327
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L S KATYPKLMG+E +K F+ ELL +A +EL+YF+ +K APL LA+YIA RQ
Sbjct: 328 LMSDKATYPKLMGLEKSKQFSIELLDRAKKELSYFDPAKTAPLLALADYIAFRQK 382
>gi|262036860|dbj|BAI47571.1| geranylgeranyl pyrophosphate synthase [Ipomoea sp. Kenyan]
Length = 373
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/292 (61%), Positives = 233/292 (79%), Gaps = 1/292 (0%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
F Y++ KA+ VNKAL+ AV+++ P++IH++MRYSLLAGGKR+RP+LCIA+CELVGGDE
Sbjct: 82 FTAYVLGKAKSVNKALEGAVLVKEPLRIHESMRYSLLAGGKRIRPMLCIAACELVGGDEE 141
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
AMPAACA+EMIHTMSL+HDDLP +DND+ RR KP +H+V+GE A+LAGDALL+ A EH
Sbjct: 142 TAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLAFAFEH 201
Query: 184 VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVHKTAK 242
+A G S +++VR + E+ ++G EGLVAG+ VDI SEG +V L+ LE+IH+HKTA
Sbjct: 202 IATATKGASSEKIVRVVGELAKSIGAEGLVAGQVVDICSEGISNVGLEHLEFIHLHKTAA 261
Query: 243 LLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
LLE +VV GA++GGG E+ ++R +AR IGLLFQVVDDILDVTKSS+ELGKTAGKDL +
Sbjct: 262 LLEGSVVLGAILGGGTEEEIAKLRKFARNIGLLFQVVDDILDVTKSSKELGKTAGKDLVA 321
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TYPKL+GI+ ++ FA +L +A +L+ F+ KAAPL LANYIA R N
Sbjct: 322 DKVTYPKLLGIQKSREFAEQLNNEAQAQLSGFDQEKAAPLIALANYIAYRDN 373
>gi|22535961|gb|AAN01135.1| geranyl diphosphate synthase [Abies grandis]
Length = 387
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/323 (58%), Positives = 243/323 (75%), Gaps = 9/323 (2%)
Query: 40 KKIKARHAQNSVFESTDIP-----LPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKA 94
++ + + N++ + ++P + F F +YM+ KA V +ALD+A+ P KIH++
Sbjct: 66 QRASSSRSSNTIVQFANLPEQGKKVVEFDFNKYMLSKAMAVTEALDKAIPHSYPQKIHES 125
Query: 95 MRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERR 154
MRYSLLAGGKRVRP+LCIA+CELVGG E AMP ACA+EMIHTMSLIHDDLP +DND+ R
Sbjct: 126 MRYSLLAGGKRVRPVLCIAACELVGGREELAMPTACAMEMIHTMSLIHDDLPCMDNDDLR 185
Query: 155 RSKPASHEVFGESTAILAGDALLSLALEH-VAVNIAGVSPDRVVRAIAEMCSAMGVEGLV 213
R KP +H+VFG+ TA+LAGDAL + A EH VA V D ++RA+ E+ A G +G++
Sbjct: 186 RGKPTNHKVFGQDTALLAGDALHAFAFEHIVAFTSKSVGSDGILRAVTELARATGPQGIM 245
Query: 214 AGEFVDIASEGKD--VSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARC 271
G+ VDIASE +D V L+ LE+IH+HKTA L E A VCGA+IGG + E+ER+R +AR
Sbjct: 246 GGQIVDIASE-RDAFVDLQTLEWIHIHKTAVLFECATVCGAIIGGASGDEIERIRRFARY 304
Query: 272 IGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEEL 331
+GLLFQVVDDILDVTKSSE+LGKTAGKDL S KATYPKLMG+E AK F+ ELL +A EEL
Sbjct: 305 LGLLFQVVDDILDVTKSSEDLGKTAGKDLVSDKATYPKLMGLEKAKGFSLELLNKAKEEL 364
Query: 332 AYFEASKAAPLYFLANYIASRQN 354
+ F+ KAAPL+ LA+Y+A RQN
Sbjct: 365 SCFDPMKAAPLFGLADYMALRQN 387
>gi|325516284|gb|ADZ24720.1| geranylgeranyl pyrophosphate synthase 3 [Solanum pennellii]
Length = 360
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/360 (56%), Positives = 265/360 (73%), Gaps = 6/360 (1%)
Query: 1 MAVSATIPSYGNSTLFRNPINDFKKSPYRAPIF----RFKLFSKKIK-ARHAQNSVFEST 55
M++S TI ++G + + + + +S +R+P F + K F+ + A + + +
Sbjct: 1 MSLSTTITTWGYTHHPFSYVGNKGRSRFRSPGFMPHLKMKFFTNPSSLSVSAVLTKEQES 60
Query: 56 DIPLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASC 115
F+EY++ KA VNKAL+ AV ++ PV IH++MRYSLLAGGKR+RP+LCIA+C
Sbjct: 61 KSKKQAMEFKEYVLEKAISVNKALESAVSIKEPVMIHESMRYSLLAGGKRIRPMLCIAAC 120
Query: 116 ELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDA 175
ELVGG ES AMPAACA+EMIHTMSLIHDDLP +DND+ RR KP +H+++GE A+LAGDA
Sbjct: 121 ELVGGVESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDA 180
Query: 176 LLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEY 234
LL+LA EH+A + GVS DR+VR I E+ +G EGLVAG+ VDI SEG DV LK LE+
Sbjct: 181 LLALAFEHIATHTKGVSSDRIVRVIGELAKCIGAEGLVAGQVVDIISEGISDVDLKHLEF 240
Query: 235 IHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGK 294
IH+HKTA LLE +VV GA++GG +VE++R +ARCIGLLFQVVDDILDVTKSS++LGK
Sbjct: 241 IHLHKTAALLEGSVVLGAILGGAPDEDVEKLRKFARCIGLLFQVVDDILDVTKSSQQLGK 300
Query: 295 TAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
TAGKDL + K TYPKL+GIE ++ FA EL +A +L F+ KAAPL+ LANYIA R+N
Sbjct: 301 TAGKDLVADKVTYPKLIGIEKSREFAEELNKEAKAQLVGFDQEKAAPLFALANYIAYREN 360
>gi|41059107|gb|AAR99082.1| geranylgeranyl pyrophosphate synthase [Plectranthus barbatus]
Length = 359
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/357 (58%), Positives = 259/357 (72%), Gaps = 6/357 (1%)
Query: 3 VSATIPSYGNSTLFRNPIND--FKKSP--YRAPIFRFKLFSKKIKARHAQNSVFESTDIP 58
+++ P++ + L + P N F + R P + F L + A A +S
Sbjct: 4 IASPFPTWPLTKLKKPPTNSNLFSSTTKSIRRPSWEF-LIPTRPSATVAVLVKEDSNKFS 62
Query: 59 LPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELV 118
L F FE YM KAE+VN+ALD AV + P IH++MRYSLLAGGKRVRPLLCIASCELV
Sbjct: 63 LNNFDFEAYMKEKAERVNRALDAAVAQREPRWIHESMRYSLLAGGKRVRPLLCIASCELV 122
Query: 119 GGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLS 178
GGDE AMPAACA EMIHTMSLIHDDLP +DND+ RR KP +H+V+GE+ A+LAGDALL+
Sbjct: 123 GGDERTAMPAACATEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGENVAVLAGDALLA 182
Query: 179 LALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHV 237
LA EHVA GV+P+RVVRA+ E +G EGLV G+ VDI SEG +V +++LEYIH+
Sbjct: 183 LAFEHVAAATEGVAPERVVRAVVEFGRYIGSEGLVGGQVVDIHSEGLAEVGVEQLEYIHL 242
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
HKTA LLEAAVV GA++GG + VE++R +ARCIGLLFQVVDDILDVTKSSEELGKTAG
Sbjct: 243 HKTAALLEAAVVMGAILGGADDEAVEKLRKFARCIGLLFQVVDDILDVTKSSEELGKTAG 302
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
KDL + K TYPKL+G+E ++ FA +L A ++L F+ ++AAPL LANYIA R N
Sbjct: 303 KDLLTDKTTYPKLLGLEKSREFAEKLRADACDQLVGFDPARAAPLIALANYIAYRNN 359
>gi|302843854|ref|XP_002953468.1| hypothetical protein VOLCADRAFT_109214 [Volvox carteri f.
nagariensis]
gi|300261227|gb|EFJ45441.1| hypothetical protein VOLCADRAFT_109214 [Volvox carteri f.
nagariensis]
Length = 312
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/294 (60%), Positives = 230/294 (78%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
+F F +YM+ +A+ VNKALDEAV + P ++++MRYSLLAGGKRVRP LC+A+CEL+GG
Sbjct: 19 SFDFNQYMVDRAKLVNKALDEAVPQKYPDTLYESMRYSLLAGGKRVRPALCLAACELIGG 78
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
D A+PAACA+EMIHTMSLIHDDLP +DND+ RR +P +H+V+GE AIL+GDALL+ A
Sbjct: 79 DVQAALPAACAMEMIHTMSLIHDDLPSMDNDDFRRGRPTNHKVYGEDIAILSGDALLTYA 138
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKT 240
EH+A GVS +RV+R I E+ A G EGLVAG+ VDI SE K+V L L+YIH+HKT
Sbjct: 139 FEHIARATKGVSAERVLRVIMELGRATGAEGLVAGQVVDIQSEDKEVGLDVLKYIHLHKT 198
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
A LLEA+VVCGA++GG + +E++R Y+R IGL FQVVDDILDVT+++E+LGKTA KDL
Sbjct: 199 AALLEASVVCGAIVGGADEATIEKLRKYSRNIGLAFQVVDDILDVTQTTEQLGKTAAKDL 258
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A K TYPKL+G+E ++ A +L+ +AI++L F+ KAAPL LA YI RQN
Sbjct: 259 AVNKTTYPKLLGLEKSREVAEQLINEAIQQLDGFDKVKAAPLVALAKYIGYRQN 312
>gi|297832526|ref|XP_002884145.1| geranylgeranyl diphosphate synthase [Arabidopsis lyrata subsp.
lyrata]
gi|297329985|gb|EFH60404.1| geranylgeranyl diphosphate synthase [Arabidopsis lyrata subsp.
lyrata]
Length = 329
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/297 (64%), Positives = 222/297 (74%), Gaps = 20/297 (6%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F YMI KA VNKALD AV L+ P+KIH+AMRYSLLAGGKRVRP+LCIA+CELVGG+
Sbjct: 49 FDFMSYMIGKANSVNKALDSAVSLREPIKIHEAMRYSLLAGGKRVRPVLCIAACELVGGE 108
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
E A+PAACA+EMIHTMSLIHDDLPF FGE A+LAGDALLS A
Sbjct: 109 EFLALPAACAVEMIHTMSLIHDDLPF----------------FGEDVAVLAGDALLSFAF 152
Query: 182 EHVAVNIAGV-SPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG---KDVSLKELEYIHV 237
EH+A + SP RVVRAI E+ A+G EGLVAG+ VD+ SEG DV L+ LE+IH+
Sbjct: 153 EHLATETPEIISPARVVRAIGELAKAIGSEGLVAGQVVDLTSEGMDQNDVGLELLEFIHL 212
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
HKTA LLEAA V GA+ GGG E+ER+R +ARCIGLLFQVVDDILDVTKSSEELGKTAG
Sbjct: 213 HKTAVLLEAATVLGAIFGGGTNEEIERLRKFARCIGLLFQVVDDILDVTKSSEELGKTAG 272
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
KDL + K TYPKLMG+E +K FA +LL A E+L F+++K PL LANYI RQN
Sbjct: 273 KDLIADKLTYPKLMGLEKSKDFAEKLLSDAQEQLHGFDSNKVKPLLALANYIGKRQN 329
>gi|302770449|ref|XP_002968643.1| hypothetical protein SELMODRAFT_231193 [Selaginella moellendorffii]
gi|300163148|gb|EFJ29759.1| hypothetical protein SELMODRAFT_231193 [Selaginella moellendorffii]
Length = 327
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/296 (63%), Positives = 233/296 (78%), Gaps = 2/296 (0%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELV-G 119
+F + Y+ K VN ALDEA+ ++ P KIH+AMRYSLLAGGKRVRP+LCIA+ E++ G
Sbjct: 32 SFDLQSYLQFKGVAVNAALDEALPMRYPDKIHEAMRYSLLAGGKRVRPILCIAASEMIPG 91
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
G + AMP+A A+EMIHTMSLIHDDLP +DND+ RR KP H+ FGE TA+LAGDA+LSL
Sbjct: 92 GTQEAAMPSAIAMEMIHTMSLIHDDLPCMDNDDLRRGKPTCHKAFGEDTAVLAGDAMLSL 151
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKD-VSLKELEYIHVH 238
A EH+A AGV +RVVR ++E+ SA+G +GLVAG+ VDIA EGK+ V L L YIH+H
Sbjct: 152 AFEHIARCSAGVPAERVVRIVSELGSAVGSQGLVAGQIVDIACEGKEGVDLDMLRYIHIH 211
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT KLLEAA VCGA+ GG + EV RVR+Y++ +GLLFQVVDDILDVTKSS+ELGKTAGK
Sbjct: 212 KTGKLLEAAGVCGAIAGGASEEEVGRVRSYSQAVGLLFQVVDDILDVTKSSQELGKTAGK 271
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
DL S K TYPKL+G++ A+ +A ELL +A ++LA F S+AAPL LA+YIA RQN
Sbjct: 272 DLISDKTTYPKLLGLQGARDYAEELLAEAKQQLAAFGESRAAPLLALADYIAYRQN 327
>gi|302816429|ref|XP_002989893.1| hypothetical protein SELMODRAFT_235899 [Selaginella moellendorffii]
gi|300142204|gb|EFJ08906.1| hypothetical protein SELMODRAFT_235899 [Selaginella moellendorffii]
Length = 366
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/362 (55%), Positives = 252/362 (69%), Gaps = 18/362 (4%)
Query: 9 SYGNSTLFRNPINDFKKSPYRAPIFRFKLFSKKIK--------------ARHAQNSVFES 54
S+ ST RNP + + F S+ +K +R Q+ S
Sbjct: 7 SHHPSTQLRNPHESSSHHKFAKGMVAFPGSSRPMKFSPPPRWRMLATPASRTLQDVKNSS 66
Query: 55 TDIPLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIAS 114
T +F + Y+ K VN ALDEA+ ++ P KIH+AMRYSLLAGGKRVRP+LCIA+
Sbjct: 67 TG--ESSFDLQSYLQFKGVAVNAALDEALPMRYPDKIHEAMRYSLLAGGKRVRPILCIAA 124
Query: 115 CELV-GGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAG 173
E++ GG + AMP+A A+EMIHTMSLIHDDLP +DND+ RR KP H+ FGE TA+LAG
Sbjct: 125 SEMIPGGTQEAAMPSAIAMEMIHTMSLIHDDLPCMDNDDLRRGKPTCHKAFGEDTAVLAG 184
Query: 174 DALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKD-VSLKEL 232
DA+LSLA EH+A AGV +RVVR ++E+ SA+G +GLVAG+ VDIA EGK+ V L L
Sbjct: 185 DAMLSLAFEHIARCSAGVPAERVVRIVSELGSAVGSQGLVAGQIVDIACEGKEGVDLDTL 244
Query: 233 EYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEEL 292
YIH+HKT KLLEAA VCGA+ GG + EV RVR+Y++ +GLLFQVVDDILDVTKSS+EL
Sbjct: 245 RYIHIHKTGKLLEAAGVCGAIAGGASEEEVGRVRSYSQAVGLLFQVVDDILDVTKSSQEL 304
Query: 293 GKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
GKTAGKDL S K TYPKL+G++ A+ +A ELL A ++LA F S+AAPL LA+YIA R
Sbjct: 305 GKTAGKDLISDKTTYPKLLGLQGARDYAEELLAGAKQQLAAFGESRAAPLLALADYIAYR 364
Query: 353 QN 354
QN
Sbjct: 365 QN 366
>gi|15224199|ref|NP_179454.1| geranylgeranyl pyrophosphate synthase 3 [Arabidopsis thaliana]
gi|75266042|sp|Q9SLG2.1|GGPP4_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 4; Short=GGPP
synthase 4; Short=GGPS4; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase 4; AltName:
Full=Dimethylallyltranstransferase 4; AltName:
Full=Farnesyl diphosphate synthase 4; AltName:
Full=Farnesyltranstransferase 4; AltName:
Full=Geranyltranstransferase 4; Flags: Precursor
gi|4185130|gb|AAD08933.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|20197573|gb|AAM15136.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|91806196|gb|ABE65826.1| geranylgeranyl pyrophosphate synthase/GGPP
synthetase/farnesyltranstransferase [Arabidopsis
thaliana]
gi|330251694|gb|AEC06788.1| geranylgeranyl pyrophosphate synthase 3 [Arabidopsis thaliana]
Length = 372
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/337 (57%), Positives = 243/337 (72%), Gaps = 16/337 (4%)
Query: 25 KSPYRAPIFRFK----LFSKKIKARHAQNSVFESTDIPLPTFPFEEYMIRKAEQVNKALD 80
KSP A IF K IK V E D +F F+ YMI KAE +N+ALD
Sbjct: 45 KSPVAAAIFARKDTREFLDSSIKL------VNEEDDFGF-SFDFKPYMISKAETINRALD 97
Query: 81 EAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSL 140
EA+ L P+ IHKAMRY++LAGGKRVRP+LC+A+CELVGG+E A+ AACA+EMIHTMSL
Sbjct: 98 EAIPLIEPLNIHKAMRYAILAGGKRVRPILCLAACELVGGEERLAIQAACAVEMIHTMSL 157
Query: 141 IHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAI 200
I DDLP +DND+ RR KP +H+VFGES AIL+G ALL+LA EH+ A VS ++VRA+
Sbjct: 158 IKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLTE--ADVSSKKMVRAV 215
Query: 201 AEMCSAMGVEGLVAGEFVDIASEG---KDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGG 257
E+ ++G +GLVAG+ D++SEG DV L++LEYIHVHKT LLEA+ V GAVIGGG
Sbjct: 216 KELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLEDLEYIHVHKTGSLLEASAVIGAVIGGG 275
Query: 258 NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAK 317
E+E+VRN+ARCIGLLFQVVDDILD TKSSEELGKTAGKD +GK TYPK++G+E +K
Sbjct: 276 TEKEIEKVRNFARCIGLLFQVVDDILDETKSSEELGKTAGKDKVAGKLTYPKVIGVEKSK 335
Query: 318 SFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
F +L A E L F++ K PL L N+IA+R +
Sbjct: 336 EFVEKLKRDAREHLQGFDSDKVKPLIALTNFIANRNH 372
>gi|116831087|gb|ABK28498.1| unknown [Arabidopsis thaliana]
Length = 373
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/337 (57%), Positives = 243/337 (72%), Gaps = 16/337 (4%)
Query: 25 KSPYRAPIFRFK----LFSKKIKARHAQNSVFESTDIPLPTFPFEEYMIRKAEQVNKALD 80
KSP A IF K IK V E D +F F+ YMI KAE +N+ALD
Sbjct: 45 KSPVAAAIFARKDTREFLDSSIKL------VNEEDDFGF-SFDFKPYMISKAETINRALD 97
Query: 81 EAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSL 140
EA+ L P+ IHKAMRY++LAGGKRVRP+LC+A+CELVGG+E A+ AACA+EMIHTMSL
Sbjct: 98 EAIPLIEPLNIHKAMRYAILAGGKRVRPILCLAACELVGGEERLAIQAACAVEMIHTMSL 157
Query: 141 IHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAI 200
I DDLP +DND+ RR KP +H+VFGES AIL+G ALL+LA EH+ A VS ++VRA+
Sbjct: 158 IKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLTE--ADVSSKKMVRAV 215
Query: 201 AEMCSAMGVEGLVAGEFVDIASEG---KDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGG 257
E+ ++G +GLVAG+ D++SEG DV L++LEYIHVHKT LLEA+ V GAVIGGG
Sbjct: 216 KELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLEDLEYIHVHKTGSLLEASAVIGAVIGGG 275
Query: 258 NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAK 317
E+E+VRN+ARCIGLLFQVVDDILD TKSSEELGKTAGKD +GK TYPK++G+E +K
Sbjct: 276 TEKEIEKVRNFARCIGLLFQVVDDILDETKSSEELGKTAGKDKVAGKLTYPKVIGVEKSK 335
Query: 318 SFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
F +L A E L F++ K PL L N+IA+R +
Sbjct: 336 EFVEKLKRDAREHLQGFDSDKVKPLIALTNFIANRNH 372
>gi|297836608|ref|XP_002886186.1| hypothetical protein ARALYDRAFT_480767 [Arabidopsis lyrata subsp.
lyrata]
gi|297332026|gb|EFH62445.1| hypothetical protein ARALYDRAFT_480767 [Arabidopsis lyrata subsp.
lyrata]
Length = 372
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/333 (57%), Positives = 245/333 (73%), Gaps = 8/333 (2%)
Query: 25 KSPYRAPIFRFKLFSKKIKARHAQNSVFESTDIPLPTFPFEEYMIRKAEQVNKALDEAVV 84
KSP A IF K + + + + V E D F F+ YMI KAE +N+ALDEA+
Sbjct: 45 KSPAAAAIFARKDIREFLDS--SIKLVNEEDDFGF-NFDFKPYMINKAETINRALDEAIP 101
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
L P+ IHKAMRY++LAGGKRVRP+LC+A+CELVGG+E A+ AACA+EMIHTMSLI DD
Sbjct: 102 LIEPLNIHKAMRYAILAGGKRVRPILCLAACELVGGEERLAIQAACAVEMIHTMSLIKDD 161
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMC 204
LP +DND+ RR KP +H+VFGES AIL+G ALL+LA EH+ A VS ++VR + E+
Sbjct: 162 LPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLTE--ADVSSKKMVRVVKELA 219
Query: 205 SAMGVEGLVAGEFVDIASEG---KDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIE 261
++G +GLVAG+ +D++SEG DV L++LEYIHVHKT LLEA+ V GAVIGGG+ E
Sbjct: 220 KSIGTKGLVAGQAMDLSSEGLDPNDVGLEDLEYIHVHKTGALLEASAVIGAVIGGGSEEE 279
Query: 262 VERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAG 321
+E+VR +ARCIGLLFQVVDDILD TKSSEELGKTAGKD +GK TYPK+MG+E +K F
Sbjct: 280 IEKVRYFARCIGLLFQVVDDILDETKSSEELGKTAGKDQVAGKLTYPKVMGLEKSKEFVK 339
Query: 322 ELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+L +A E + F++ K PL L N+IA+R N
Sbjct: 340 KLKREAKEHIQGFDSDKVKPLIALTNFIANRNN 372
>gi|297825291|ref|XP_002880528.1| geranylgeranyl pyrophosphate synthase [Arabidopsis lyrata subsp.
lyrata]
gi|297326367|gb|EFH56787.1| geranylgeranyl pyrophosphate synthase [Arabidopsis lyrata subsp.
lyrata]
Length = 372
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/297 (62%), Positives = 226/297 (76%), Gaps = 5/297 (1%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
TF F+ YMI KAE VNKALDEA+ + P+KIH+AMRY++LA GKRVRP+LC+ASCELVGG
Sbjct: 78 TFEFDPYMISKAESVNKALDEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGG 137
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
E+ AMPAACA+EMIHTMSLI DDLP +DND+ RR KP +H+V+GE AIL+G ALLSLA
Sbjct: 138 QENAAMPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLA 197
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKD---VSLKELEYIHV 237
EH+ A +S +R+V A+ E+ ++G GLVAG+ +DI+SEG D V L+ LE+IHV
Sbjct: 198 FEHMTT--AEISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFIHV 255
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
HKTA LLE A V GA+IGGG+ E+E VR +ARCIGLLFQVVDDILD TKSSEELGKTAG
Sbjct: 256 HKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGKTAG 315
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
KD +GK TYPKLMG+E +K F L A + L F + K APL L +IA+R
Sbjct: 316 KDQLTGKLTYPKLMGLEKSKEFVKRLTKDARQHLQGFSSEKVAPLVALTTFIANRNK 372
>gi|159490409|ref|XP_001703169.1| geranylgeranyl diphosphate synthase [Chlamydomonas reinhardtii]
gi|158270709|gb|EDO96545.1| geranylgeranyl diphosphate synthase [Chlamydomonas reinhardtii]
Length = 345
Score = 368 bits (945), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 175/294 (59%), Positives = 229/294 (77%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
+F F YM+ +A+ VNKA+DEAV L+ P ++++MRYSLLAGGKRVRP LC+A+CELVGG
Sbjct: 52 SFDFNTYMVDRAKLVNKAMDEAVPLKYPETLNESMRYSLLAGGKRVRPALCLAACELVGG 111
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
D A+PAACA+EM+HTMSLIHDDLP +DND+ RR +P +H+V+GE AILAGDALLS +
Sbjct: 112 DIHAALPAACAMEMVHTMSLIHDDLPSMDNDDFRRGRPTNHKVYGEDIAILAGDALLSFS 171
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKT 240
EH+A GV +RV+R I E+ A+G +GLVAG+ VDI SE K+V L L+YIH HKT
Sbjct: 172 FEHIARATKGVPAERVLRVIMELGKAVGQDGLVAGQVVDIQSEDKEVGLDVLKYIHEHKT 231
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
A LLEA+VVCGA++GG + +E++R Y+ IGL FQV+DDILDVT ++E+LGKTA KDL
Sbjct: 232 AALLEASVVCGAILGGADESTIEKLRKYSLNIGLAFQVIDDILDVTATTEQLGKTAAKDL 291
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A K TYPKL+G+E +K A +L+ +AI++L F+A+KAAPL LA +I RQN
Sbjct: 292 AVNKTTYPKLLGLEKSKQVADDLIKEAIQQLDGFDAAKAAPLVALAKFIGYRQN 345
>gi|297830700|ref|XP_002883232.1| hypothetical protein ARALYDRAFT_898426 [Arabidopsis lyrata subsp.
lyrata]
gi|297329072|gb|EFH59491.1| hypothetical protein ARALYDRAFT_898426 [Arabidopsis lyrata subsp.
lyrata]
Length = 356
Score = 366 bits (939), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 183/297 (61%), Positives = 231/297 (77%), Gaps = 6/297 (2%)
Query: 64 FEEYMIRKAEQVNKALDEAVVL-QPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
F YMIRK++ VN+ LDEAV L +P +KI +AMRY+LL+GGKRVRP+LC+A+CELVGG E
Sbjct: 60 FMSYMIRKSKSVNEVLDEAVPLCEPVLKIREAMRYTLLSGGKRVRPMLCLAACELVGGQE 119
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
S AMP ACA+EMIH SLI DDLP +D+D RR KP +H+VFGE+ AILA DAL++LA++
Sbjct: 120 STAMPCACAVEMIHASSLIQDDLPCMDDDNLRRGKPTNHKVFGENIAILAVDALIALAIK 179
Query: 183 HVAVNIA-GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK----DVSLKELEYIHV 237
H + + V P+RV+ AI EM A+G EGLVAG+ D+ EGK D LK LE+IH+
Sbjct: 180 HTVESTSLDVPPERVLLAILEMARAVGTEGLVAGQAADLDGEGKSFDNDTGLKHLEFIHI 239
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
HKTA LLEAA V GA++GGG+ E+ER+R+YARCIGL+FQVVDD+LDVTKSSEELGKTAG
Sbjct: 240 HKTAALLEAAAVMGAIMGGGSDEEIERIRSYARCIGLMFQVVDDVLDVTKSSEELGKTAG 299
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
KDL S K TYPK+MG+E ++ +A +L +A E L F+ KAAPL LA+YI +RQN
Sbjct: 300 KDLISEKLTYPKVMGVEKSREYAEKLNREAREHLNMFDPDKAAPLLLLADYIVNRQN 356
>gi|350537639|ref|NP_001234302.1| geranylgeranyl pyrophosphate synthase 2 [Solanum lycopersicum]
gi|82547882|gb|ABB82555.1| geranylgeranyl pyrophosphate synthase 2 [Solanum lycopersicum]
Length = 363
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 199/360 (55%), Positives = 258/360 (71%), Gaps = 15/360 (4%)
Query: 7 IPSYGNSTLFRN---PINDF--------KKSPYRAPIFRFKLFSKKIKARHAQNSVFEST 55
+ S+G + L N P N F K ++ FS + A N E
Sbjct: 7 VDSWGQACLVINQSLPYNSFNGLMKINSKNRKILKQSLSYRTFSSLTVSAIATN---EKV 63
Query: 56 DIPLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASC 115
+ F F+ Y+ KA VNKALDEA++++ P KIH+AMRYSLLAGGKRVRP+LC+A+C
Sbjct: 64 VMEKEEFNFKVYVAEKAICVNKALDEAIMVKDPPKIHEAMRYSLLAGGKRVRPMLCLAAC 123
Query: 116 ELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDA 175
ELVGG++ AM AACA+EMIHTMSLIHDDLP +D+D+ RR KP +H+V+GE A+LAGDA
Sbjct: 124 ELVGGNQGNAMAAACAVEMIHTMSLIHDDLPCMDDDDLRRGKPTNHKVYGEDVAVLAGDA 183
Query: 176 LLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEY 234
LL+ A E++A GV P R++ A+AE+ ++G EGLVAG+ D+A G +V L+ LE+
Sbjct: 184 LLAFAFEYLATATTGVPPSRILVAVAELAKSVGTEGLVAGQVADLACTGNPNVGLEMLEF 243
Query: 235 IHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGK 294
IH+HKTA LLEA+VV GA++GGG EV+++R +A+CIGLLFQVVDDILDVTKSS ELGK
Sbjct: 244 IHIHKTAALLEASVVIGAILGGGADEEVDKLRRFAQCIGLLFQVVDDILDVTKSSSELGK 303
Query: 295 TAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
TAGKDLA K TYPKL+G+E AK FA EL G+A ++LA F++ KAAPL LA+YIA+RQN
Sbjct: 304 TAGKDLAVDKTTYPKLLGLEKAKEFAAELNGEAKQQLAAFDSHKAAPLIALADYIANRQN 363
>gi|1944371|dbj|BAA19583.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 373
Score = 365 bits (936), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 182/297 (61%), Positives = 226/297 (76%), Gaps = 5/297 (1%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
TF F+ YM+ KAE VNKAL+EA+ + P+KIH+AMRY++LA GKRVRP+LC+ASCELVGG
Sbjct: 79 TFEFDPYMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGG 138
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
E+ AMPAACA+EMIHTMSLI DDLP +DND+ RR KP +H+V+GE AIL+G ALLSLA
Sbjct: 139 QENAAMPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLA 198
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKD---VSLKELEYIHV 237
EH+ A +S +R+V A+ E+ ++G GLVAG+ +DI+SEG D V L+ LE+IHV
Sbjct: 199 FEHMTT--AEISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFIHV 256
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
HKTA LLE A V GA+IGGG+ E+E VR +ARCIGLLFQVVDDILD TKSSEELGKTAG
Sbjct: 257 HKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGKTAG 316
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
KD +GK TYPKL+G+E +K F L A + L F + K APL L +IA+R
Sbjct: 317 KDQLAGKLTYPKLIGLEKSKEFVKRLTKDARQHLQGFSSEKVAPLVALTTFIANRNK 373
>gi|15224064|ref|NP_179960.1| geranylgeranyl pyrophosphate synthase 4 [Arabidopsis thaliana]
gi|75218930|sp|O04046.2|GGPP2_ARATH RecName: Full=Heterodimeric geranylgeranyl pyrophosphate synthase
large subunit 2; Short=GGPP synthase 2; Short=GGPS2;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 2;
AltName: Full=Dimethylallyltranstransferase 2; AltName:
Full=Farnesyl diphosphate synthase 2; AltName:
Full=Farnesyltranstransferase 2; AltName:
Full=Geranyltranstransferase 2; Flags: Precursor
gi|3152604|gb|AAC17083.1| pregeranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|21593114|gb|AAM65063.1| pregeranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|26450970|dbj|BAC42592.1| putative pregeranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|28950937|gb|AAO63392.1| At2g23800 [Arabidopsis thaliana]
gi|206748358|gb|ACI22362.1| geranylgeranyl pyrophosphate synthase 2 [Arabidopsis thaliana]
gi|330252398|gb|AEC07492.1| geranylgeranyl pyrophosphate synthase 4 [Arabidopsis thaliana]
Length = 376
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 182/297 (61%), Positives = 226/297 (76%), Gaps = 5/297 (1%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
TF F+ YM+ KAE VNKAL+EA+ + P+KIH+AMRY++LA GKRVRP+LC+ASCELVGG
Sbjct: 82 TFEFDPYMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGG 141
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
E+ AMPAACA+EMIHTMSLI DDLP +DND+ RR KP +H+V+GE AIL+G ALLSLA
Sbjct: 142 QENAAMPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLA 201
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKD---VSLKELEYIHV 237
EH+ A +S +R+V A+ E+ ++G GLVAG+ +DI+SEG D V L+ LE+IHV
Sbjct: 202 FEHMTT--AEISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFIHV 259
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
HKTA LLE A V GA+IGGG+ E+E VR +ARCIGLLFQVVDDILD TKSSEELGKTAG
Sbjct: 260 HKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGKTAG 319
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
KD +GK TYPKL+G+E +K F L A + L F + K APL L +IA+R
Sbjct: 320 KDQLAGKLTYPKLIGLEKSKEFVKRLTKDARQHLQGFSSEKVAPLVALTTFIANRNK 376
>gi|297836610|ref|XP_002886187.1| hypothetical protein ARALYDRAFT_900253 [Arabidopsis lyrata subsp.
lyrata]
gi|297332027|gb|EFH62446.1| hypothetical protein ARALYDRAFT_900253 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 178/296 (60%), Positives = 229/296 (77%), Gaps = 5/296 (1%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F+ YMIRKAE +N+ALD+A+ L P+ I+KAMRY++ AGGKRVRP+LC+A+CELVGG
Sbjct: 110 FGFKPYMIRKAETINRALDKAIPLIEPLNIYKAMRYTIFAGGKRVRPILCLAACELVGGG 169
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
E A+PAAC++EMIHTMSLI DDLP +DND+ RR KP +H+VFGES AIL+G ALL+LA
Sbjct: 170 ERSAIPAACSVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAF 229
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG---KDVSLKELEYIHVH 238
EH+ A VS ++VR + E+ ++G +GLVAG+ +D++SEG D L++LEYIHVH
Sbjct: 230 EHLTE--ADVSSKKMVRVVKELAKSIGTKGLVAGQAMDLSSEGLDPNDFRLEDLEYIHVH 287
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT LLEA+ V GAVIGGG+ E+E+VR++ARCIGLLFQVVDDILD TKSSEELGKTAGK
Sbjct: 288 KTGALLEASAVIGAVIGGGSEEEIEKVRSFARCIGLLFQVVDDILDETKSSEELGKTAGK 347
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
D +GK TYP+++G+E +K F +L A E L F+ K PL L N+IA+R N
Sbjct: 348 DKVAGKLTYPRVIGLEKSKEFVKKLNRDAREHLQGFDEDKVKPLIALTNFIANRNN 403
>gi|168042697|ref|XP_001773824.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674939|gb|EDQ61441.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 332
Score = 360 bits (925), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 187/294 (63%), Positives = 233/294 (79%), Gaps = 1/294 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F + Y+ KA+ VN ALD+AV +Q P KI +AMRYSLLAGGKRVRP LCIA+CELVGG+
Sbjct: 39 FDLDSYLRAKAKAVNVALDKAVPMQYPEKIREAMRYSLLAGGKRVRPALCIAACELVGGN 98
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
E AMP+ACA+EM+HTMSLIHDDLP +D+D+ RR KP +H+ FGE TA+LAGDALL+ A
Sbjct: 99 EDLAMPSACAMEMVHTMSLIHDDLPCMDDDDLRRGKPTNHKAFGEDTAVLAGDALLAYAF 158
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVHKT 240
EH+A GV DRV+R IA + A+G EGLVAG+ VDIASEG + V L+ LEY+H HKT
Sbjct: 159 EHIARATTGVPADRVLRVIAHLGKAVGSEGLVAGQIVDIASEGDRTVGLEILEYVHTHKT 218
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
A LLE+AVV GA++GG + E+ R+ NYAR +GLLFQVVDDILDVTKSS ELGKTAGKDL
Sbjct: 219 AVLLESAVVSGAILGGASEDEISRLSNYARNVGLLFQVVDDILDVTKSSAELGKTAGKDL 278
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ KATYPKL+G+E +++FA EL+ +A ++L+ F+ K APL LA+YIA RQN
Sbjct: 279 VADKATYPKLLGLEKSRAFAEELIRKAKDQLSVFDQQKVAPLLGLADYIAYRQN 332
>gi|325516282|gb|ADZ24719.1| geranylgeranyl pyrophosphate synthase 2 [Solanum pennellii]
Length = 363
Score = 360 bits (924), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 185/294 (62%), Positives = 236/294 (80%), Gaps = 1/294 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F+ Y+ KA VN+ALDEA++++ P IH+AMRYSLLAGGKRVRP+LC A+CELVGG+
Sbjct: 70 FDFKVYVAEKAICVNRALDEAIMVKDPPMIHEAMRYSLLAGGKRVRPMLCFAACELVGGN 129
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
+ AM AACA+EMIHTMSLIHDDLP +D+D+ RR KP +H+V+GE A+LAGDALL+ A
Sbjct: 130 QGNAMAAACAVEMIHTMSLIHDDLPCMDDDDLRRGKPTNHKVYGEDVAVLAGDALLAFAF 189
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKT 240
E++A GV P R++ A+AE+ ++G EGLVAG+ D+A G +V L+ LE+IH+HKT
Sbjct: 190 EYLATATIGVPPSRILVAVAELAKSVGTEGLVAGQVADLACTGNPNVGLEMLEFIHIHKT 249
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
A LLEA+VV GA++GGG EV+++R +ARCIGLLFQVVDDILDVTKSS ELGKTAGKDL
Sbjct: 250 AALLEASVVIGAILGGGADEEVDKLRRFARCIGLLFQVVDDILDVTKSSSELGKTAGKDL 309
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A K TYPKL+G+E AK FA EL G+A ++LA F++ KAAPL LA+YIA+RQN
Sbjct: 310 AVDKTTYPKLLGLEKAKEFAAELNGEAKQQLAAFDSHKAAPLIALADYIANRQN 363
>gi|1229164|gb|AAB67730.1| pregeranygeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 378
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 179/296 (60%), Positives = 224/296 (75%), Gaps = 5/296 (1%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
TF F+ YM+ KAE VNKAL+EA+ + P+KIH+AMRY++LA GKRVRP+LC+ASCELVGG
Sbjct: 84 TFEFDPYMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGG 143
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
E+ +PAACA+EMIHTMSLI DDLP +DND+ RR KP + +V+GE AIL+G ALLSLA
Sbjct: 144 QENATIPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTDKVYGEGVAILSGGALLSLA 203
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKD---VSLKELEYIHV 237
EH+ A +S +R+V A+ E+ ++G GLVAG+ +DI+SEG D V L+ LE+IHV
Sbjct: 204 FEHMTT--AEISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFIHV 261
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
HKTA LLE A V GA+IGGG+ E+E VR +ARCIGLLFQVVDDILD TKSSEELGKTAG
Sbjct: 262 HKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGKTAG 321
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
KD +GK TYPKL+G+E +K F L A + L F + K APL L +IA+R
Sbjct: 322 KDQLAGKLTYPKLIGLEKSKEFVKRLTKDARQHLQGFSSEKVAPLVALTTFIANRN 377
>gi|384252734|gb|EIE26210.1| Polyprenyl synthetase [Coccomyxa subellipsoidea C-169]
Length = 289
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 176/289 (60%), Positives = 222/289 (76%), Gaps = 2/289 (0%)
Query: 68 MIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMP 127
M +A VN+ALD++V LQ P I+++MRYSLLAGGKRVRP LC+A+CE VGG+ + AMP
Sbjct: 1 MKERATLVNEALDKSVPLQYPEIINESMRYSLLAGGKRVRPCLCLAACEAVGGNIAQAMP 60
Query: 128 AACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVN 187
ACA+EM+HTMSLIHDDLP +DND+ RR KP +H+V+GE AILAGDALL LA E++
Sbjct: 61 TACAMEMLHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEDVAILAGDALLCLAFEYICRE 120
Query: 188 IAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG--KDVSLKELEYIHVHKTAKLLE 245
GV+P+R+VR + E+ A G EGLVAG+ VDI SEG + V L+ L+YIH HKTA LLE
Sbjct: 121 TRGVAPERIVRVVCEVGKATGAEGLVAGQIVDIKSEGMAEQVGLETLQYIHEHKTAALLE 180
Query: 246 AAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKA 305
A+VVCGA++GG +VER+R YARCIGL FQVVDDILD+T+SSE LGKTAGKDL S K
Sbjct: 181 ASVVCGALVGGAGEPDVERLRKYARCIGLAFQVVDDILDITQSSEVLGKTAGKDLLSDKT 240
Query: 306 TYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
TYP L+GIE +K A +L+ A E+L+ ++ +K APL LA YI +R N
Sbjct: 241 TYPSLLGIERSKEVAQQLIADAKEQLSCYDPAKVAPLLGLATYIGARTN 289
>gi|126030920|pdb|2J1P|A Chain A, Geranylgeranyl Diphosphate Synthase From Sinapis Alba In
Complex With Ggpp
gi|126030921|pdb|2J1P|B Chain B, Geranylgeranyl Diphosphate Synthase From Sinapis Alba In
Complex With Ggpp
Length = 293
Score = 353 bits (907), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 181/292 (61%), Positives = 222/292 (76%), Gaps = 18/292 (6%)
Query: 67 YMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAM 126
Y+IRKA+ VNKALD AV L+ P+KIH+A RYSLLAGGKRVRP+LCIA+CELVGG+ES A
Sbjct: 16 YIIRKADSVNKALDSAVPLREPLKIHEAXRYSLLAGGKRVRPVLCIAACELVGGEESLAX 75
Query: 127 PAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAV 186
PAACA+E IHT SLIHDDLP DND+ RR KP +H+V+GE A+LAGDALLS A EH+A
Sbjct: 76 PAACAVEXIHTXSLIHDDLPCXDNDDLRRGKPTNHKVYGEDVAVLAGDALLSFAFEHLAS 135
Query: 187 NIAG-VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKD---VSLKELEYIHVHKTAK 242
+ VSP RVVRA+ E+ A+G EGLVAG+ VDI+SEG D V L+ L++IH+HKTA
Sbjct: 136 ATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNNVGLEHLKFIHLHKTAA 195
Query: 243 LLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
LLEA+ V G +IGGG+ E+ER+R +ARCIGLLFQVVDDILDVTKSS
Sbjct: 196 LLEASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVTKSS------------- 242
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TYPKL G+E ++ FA +L +A ++L F++ K APL LANYIA+RQN
Sbjct: 243 -KLTYPKLXGLEKSREFAEKLNTEARDQLLGFDSDKVAPLLALANYIANRQN 293
>gi|15231055|ref|NP_188651.1| geranylgeranyl diphosphate synthase 10 [Arabidopsis thaliana]
gi|75273683|sp|Q9LJY2.1|GGPPA_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 10,
mitochondrial; Short=GGPP synthase 10; Short=GGPS10;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 10;
AltName: Full=Dimethylallyltranstransferase 10; AltName:
Full=Farnesyl diphosphate synthase 10; AltName:
Full=Farnesyltranstransferase 10; AltName:
Full=Geranyltranstransferase 10; Flags: Precursor
gi|9293973|dbj|BAB01876.1| geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|91806447|gb|ABE65951.1| geranylgeranyl pyrophosphate synthase/GGPP
synthetase/farnesyltranstransferase [Arabidopsis
thaliana]
gi|332642821|gb|AEE76342.1| geranylgeranyl diphosphate synthase 10 [Arabidopsis thaliana]
Length = 344
Score = 352 bits (904), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 189/340 (55%), Positives = 240/340 (70%), Gaps = 19/340 (5%)
Query: 26 SPYRAPIFRFKLFSKKIKARHAQNSVFESTDIPLPT-----FPFEEYMIRKAEQVNKALD 80
S +R+ F F F R N V + PL + F F YM+ KA+ VNKAL+
Sbjct: 13 SIFRSLQFLFWRF------RPRYNDVTSALTRPLTSAASYDFKFMSYMVNKAKSVNKALE 66
Query: 81 EAVVL-QPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMS 139
EAV L +P +KI +AMRY+LL+ GKRVRP+LC+A+CELVGG ES AM AACA+EM+H S
Sbjct: 67 EAVPLREPELKIREAMRYTLLSDGKRVRPMLCLAACELVGGQESTAMSAACAIEMLHASS 126
Query: 140 LIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVR 198
LI DDLP +DND RR KP +H VFGES AILA AL++LA++ + A V P+R+++
Sbjct: 127 LILDDLPCMDNDSLRRGKPTNHIVFGESIAILASQALIALAVQKTTSSTFADVPPERILK 186
Query: 199 AIAEMCSAMGVEGLVAGEFVDIASEG----KDVSLKELEYIHVHKTAKLLEAAVVCGAVI 254
+ EM A VEGLVAG+ D+A EG D L+ LE+IH+HKTA LLEAA V GA++
Sbjct: 187 TVQEMVKA--VEGLVAGQQADLAGEGMRFDSDTGLEHLEFIHIHKTAALLEAAAVMGAIM 244
Query: 255 GGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIE 314
GGG+ E+ER+R+YARCIGL+FQVVDD+LDVTKSSEELGKTAGKDL +GK TYP+LMG+E
Sbjct: 245 GGGSDEEIERLRSYARCIGLMFQVVDDVLDVTKSSEELGKTAGKDLIAGKLTYPRLMGVE 304
Query: 315 NAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+K +A L +A E L F+ K APL LA+YI +RQN
Sbjct: 305 KSKEYAERLNIEAREHLLGFDIDKVAPLVSLADYIVNRQN 344
>gi|116831222|gb|ABK28565.1| unknown [Arabidopsis thaliana]
Length = 345
Score = 352 bits (904), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 189/340 (55%), Positives = 240/340 (70%), Gaps = 19/340 (5%)
Query: 26 SPYRAPIFRFKLFSKKIKARHAQNSVFESTDIPLPT-----FPFEEYMIRKAEQVNKALD 80
S +R+ F F F R N V + PL + F F YM+ KA+ VNKAL+
Sbjct: 13 SIFRSLQFLFWRF------RPRYNDVTSALTRPLTSAASYDFKFMSYMVNKAKSVNKALE 66
Query: 81 EAVVL-QPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMS 139
EAV L +P +KI +AMRY+LL+ GKRVRP+LC+A+CELVGG ES AM AACA+EM+H S
Sbjct: 67 EAVPLREPELKIREAMRYTLLSDGKRVRPMLCLAACELVGGQESTAMSAACAIEMLHASS 126
Query: 140 LIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVR 198
LI DDLP +DND RR KP +H VFGES AILA AL++LA++ + A V P+R+++
Sbjct: 127 LILDDLPCMDNDSLRRGKPTNHIVFGESIAILASQALIALAVQKTTSSTFADVPPERILK 186
Query: 199 AIAEMCSAMGVEGLVAGEFVDIASEG----KDVSLKELEYIHVHKTAKLLEAAVVCGAVI 254
+ EM A VEGLVAG+ D+A EG D L+ LE+IH+HKTA LLEAA V GA++
Sbjct: 187 TVQEMVKA--VEGLVAGQQADLAGEGMRFDSDTGLEHLEFIHIHKTAALLEAAAVMGAIM 244
Query: 255 GGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIE 314
GGG+ E+ER+R+YARCIGL+FQVVDD+LDVTKSSEELGKTAGKDL +GK TYP+LMG+E
Sbjct: 245 GGGSDEEIERLRSYARCIGLMFQVVDDVLDVTKSSEELGKTAGKDLIAGKLTYPRLMGVE 304
Query: 315 NAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+K +A L +A E L F+ K APL LA+YI +RQN
Sbjct: 305 KSKEYAERLNIEAREHLLGFDIDKVAPLVSLADYIVNRQN 344
>gi|405789932|gb|AFS28709.1| putative geranylgeranyl pyrophosphate synthase, partial [Olea
europaea]
Length = 251
Score = 352 bits (903), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 168/251 (66%), Positives = 207/251 (82%), Gaps = 1/251 (0%)
Query: 82 AVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLI 141
AV+LQ P+KIH++MRYSLLAGGKRVRP+LCIA+CELVGG+ES AMP+ACA+EMIHTMSL+
Sbjct: 1 AVLLQEPLKIHESMRYSLLAGGKRVRPMLCIAACELVGGEESTAMPSACAVEMIHTMSLM 60
Query: 142 HDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIA 201
HDDLPF+DND+ RR KP +H++FGE +LAGDALL+ A EH+AV GV +R+VR I
Sbjct: 61 HDDLPFMDNDDLRRGKPTNHKIFGEDVTVLAGDALLAYAFEHMAVATKGVPSERIVRVIG 120
Query: 202 EMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAI 260
E+ +G EGLVAG+ VDI SEG DV L LE+IH+HKTA LLE +VV GA++GG N
Sbjct: 121 ELAKCIGSEGLVAGQVVDICSEGNSDVGLDHLEFIHIHKTAALLEGSVVLGAILGGANDQ 180
Query: 261 EVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFA 320
EVE++R +ARCIGLLFQVVDDILDVTKSS+ELGKTAGKDL + K TYPKL+GI+ +K FA
Sbjct: 181 EVEKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLLADKTTYPKLIGIDKSKEFA 240
Query: 321 GELLGQAIEEL 331
+L +A E+L
Sbjct: 241 EKLNREAQEQL 251
>gi|308081242|ref|NP_001183930.1| putative geranylgeranyl pyrophosphate synthase 1 [Zea mays]
gi|148535919|gb|ABQ85646.1| putative geranylgeranyl pyrophosphate synthase 1 [Zea mays]
gi|414590653|tpg|DAA41224.1| TPA: hypothetical protein ZEAMMB73_231747 [Zea mays]
Length = 367
Score = 350 bits (899), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 189/304 (62%), Positives = 229/304 (75%), Gaps = 12/304 (3%)
Query: 62 FPFEEYMIRKAEQVNKALDEAV-VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
F F+ YM +A VN+ALD AV +PP +H AMRY+LLAGGKRVRP LC+A+C +VGG
Sbjct: 65 FDFKAYMGERAVAVNRALDAAVPAGEPPAALHDAMRYALLAGGKRVRPALCLAACAVVGG 124
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
E WAMPAA A+EM+HTMSL+HDDLP +D+D+ RR KP H V+GE A+LAGDALLSL+
Sbjct: 125 PEPWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGDALLSLS 184
Query: 181 LEHVAVNIAGVSPD--------RVVRAIAEMCSAMGVEGLVAGEFVDIASEG--KDVSLK 230
H+A ++ PD RVVRAI E+ +G EGLVAG+ VD+ G + V L+
Sbjct: 185 FHHMA-SVGSYPPDVDPEKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGTSETVPLE 243
Query: 231 ELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSE 290
LEYIH+HKTA LLEA+VV GA+IGGG ++ER+R YAR IGLLFQVVDDILDVTKSSE
Sbjct: 244 RLEYIHLHKTAALLEASVVIGAIIGGGTDEQIERLRKYARSIGLLFQVVDDILDVTKSSE 303
Query: 291 ELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIA 350
ELGKTAGKDLAS K TYPKL+G+E ++ FA ELL A+E+LA F+ KAAPL LANYIA
Sbjct: 304 ELGKTAGKDLASDKTTYPKLLGLEKSREFAEELLSDAVEQLACFDKEKAAPLLHLANYIA 363
Query: 351 SRQN 354
RQN
Sbjct: 364 HRQN 367
>gi|313118274|sp|Q9LRR0.2|GGPP8_ARATH RecName: Full=Putative geranylgeranyl pyrophosphate synthase 8,
chloroplastic; Short=GGPP synthase 8; Short=GGPS8;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 8;
AltName: Full=Dimethylallyltranstransferase 8; AltName:
Full=Farnesyl diphosphate synthase 8; AltName:
Full=Farnesyltranstransferase 8; AltName:
Full=Geranyltranstransferase 8; Flags: Precursor
Length = 361
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 185/298 (62%), Positives = 237/298 (79%), Gaps = 5/298 (1%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVV-LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
F F+ YMIRKAE VN ALD ++V L+ P+ + +A+RYSLLAGGKRVRPLLCIA CELVGG
Sbjct: 64 FDFKLYMIRKAESVNAALDVSIVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGG 123
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
DE+ AM AACA+EMIHT SLIHDDLP +DN + RR KP +H+VFGE A+LAGDALL+LA
Sbjct: 124 DEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGDALLALA 183
Query: 181 LEHVAVNIAG-VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG---KDVSLKELEYIH 236
EH+ V +G V+ +R++RA+ E+ A+G +GLVAG+ VD++SE DV L+ LE+IH
Sbjct: 184 FEHMTVVSSGLVASERMIRAVVELARAIGTKGLVAGQVVDLSSERLNPHDVGLERLEFIH 243
Query: 237 VHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTA 296
+HKTA LLEAA V GA++GGG E+E++R YARCIGLLFQVVDDILDVTKS+EELGKTA
Sbjct: 244 LHKTAALLEAAAVIGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTA 303
Query: 297 GKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
GKD+ +GK TYP+L+G+E ++ A +L +A E+L FE+ KAAPL LA+YI+ R +
Sbjct: 304 GKDVMAGKLTYPRLIGLERSREVAEKLSREAEEQLLGFESDKAAPLVALASYISCRND 361
>gi|356572072|ref|XP_003554194.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Glycine max]
Length = 343
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 183/302 (60%), Positives = 230/302 (76%), Gaps = 8/302 (2%)
Query: 60 PTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
P F F+ YM+ K VN+ALD AV L+ P K+H+AMRY+LLAGGKR+RP+LC+A+C LVG
Sbjct: 43 PNFDFKAYMLDKINTVNRALDAAVALREPRKLHEAMRYTLLAGGKRIRPVLCLAACSLVG 102
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
G E+ A+PAACA+EMIHTMSLIHDDLP +DND+ RR KP SH++FGE A+LAGDALL+L
Sbjct: 103 GSEATAIPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTSHKIFGEHVAVLAGDALLAL 162
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVS-------LKEL 232
A EHVA + G RVVRAI E+ +G EG++AG+ VD+ SEG +S L+ L
Sbjct: 163 AFEHVAASTEGAYAARVVRAIGELAKCIGAEGVMAGQVVDVNSEGLTLSMSDEVAVLERL 222
Query: 233 EYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEEL 292
E+IHVHKTA ++E AVV GA++GGG+ E+ER+R + RCIGLL QVVDD+LDVTKSSEEL
Sbjct: 223 EFIHVHKTA-VVEGAVVMGAILGGGSDEEIERLRMFGRCIGLLGQVVDDVLDVTKSSEEL 281
Query: 293 GKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
GKTA KDL + K TYPK++GI +K FA +L+ A + LA F KAAPL+ L NYIA R
Sbjct: 282 GKTAKKDLVADKLTYPKVLGIHESKEFAHKLVHDANKMLAGFHPPKAAPLFALTNYIAYR 341
Query: 353 QN 354
QN
Sbjct: 342 QN 343
>gi|442743257|gb|AFC88470.2| geranylgeranyl pyrophosphate synthase 4 [Nicotiana tabacum]
Length = 372
Score = 344 bits (883), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 166/293 (56%), Positives = 218/293 (74%), Gaps = 1/293 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F+ YM +K + VN+ALD AV L+ P+K H+AMRYSLL+ GKRV P+LCIA+CELVGG
Sbjct: 79 FDFKSYMHQKIKSVNRALDAAVPLREPLKFHEAMRYSLLSEGKRVCPVLCIAACELVGGQ 138
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
ES AMPAAC +EM+H M ++HDDLP +DND RR K ++H+VFGE+ +LAG +L++LA
Sbjct: 139 ESTAMPAACGMEMVHAMCMMHDDLPCMDNDTLRRGKLSNHKVFGENVTVLAGYSLVALAF 198
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKT 240
EH+A GV P +VRAI E+ +G EG AG+ +D+ S GK D L+ELEYIH HKT
Sbjct: 199 EHMATATQGVHPKTMVRAIGELARLIGPEGAAAGQVLDLLSGGKSDTGLEELEYIHRHKT 258
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
A EAA + GA++GG E+ R+R +++CIGLLFQVVDDILDVTKSSE+LGKTAGKDL
Sbjct: 259 ADFAEAAAIIGAMVGGATNEEINRLRKFSQCIGLLFQVVDDILDVTKSSEQLGKTAGKDL 318
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
+ K TYPK++GIE +K +A L +A E+L F+ KAAPL +A+++ RQ
Sbjct: 319 LANKLTYPKMIGIEKSKEYAQNLSKEAKEQLVGFDPEKAAPLLAMADFVLHRQ 371
>gi|88910043|gb|ABD57975.1| geranyl diphosphate synthase [Arnebia euchroma]
Length = 338
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 164/307 (53%), Positives = 227/307 (73%), Gaps = 2/307 (0%)
Query: 50 SVFESTDIPLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPL 109
+VFE + P F F+ YMI K +N+ALD AV L P+K+H+AMRY+LL+GGKRVRP+
Sbjct: 32 NVFEIEEEPRSRFDFKSYMINKITSINEALDSAVPLIEPIKLHEAMRYTLLSGGKRVRPI 91
Query: 110 LCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTA 169
+CIA+CELVGG ES MP ACA EMIH+MS++ DDLP +DND+ RR K ++H V+GE
Sbjct: 92 VCIAACELVGGHESTVMPTACAQEMIHSMSVMLDDLPCMDNDDFRRGKLSNHRVYGEKIT 151
Query: 170 ILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKD--V 227
+LA +L +LA++HV GV P+R+VRA+ EM G +G AG+ D+ S G+D V
Sbjct: 152 LLAVRSLQALAVDHVVTATRGVPPERLVRALTEMAILTGSKGAAAGQIADLCSSGEDFNV 211
Query: 228 SLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTK 287
S+++LE+IH+ KT L E +VV GA+IGG + E+E++R +++CIGL+FQ+VDD+LDVTK
Sbjct: 212 SIEQLEHIHMQKTGTLCEGSVVSGAIIGGASEEEIEKLRKFSKCIGLMFQIVDDVLDVTK 271
Query: 288 SSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLAN 347
SS ELGK AGKD+ + KATYP+L+GIE ++ A +L +A E+L+ F+ KAAPL LA+
Sbjct: 272 SSMELGKPAGKDVVAAKATYPRLIGIEKSRELALKLNSEAKEQLSGFDQEKAAPLIALAD 331
Query: 348 YIASRQN 354
YI +RQN
Sbjct: 332 YIVARQN 338
>gi|18146809|dbj|BAB82463.1| geranylgeranyl pyrophosphate synthase [Gentiana lutea]
Length = 367
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 175/298 (58%), Positives = 219/298 (73%), Gaps = 7/298 (2%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F+ Y+I KA +VN+ALD+AV ++ P IH+AMRYSLLAGGKRVRP+LCIA+CELVGG+
Sbjct: 72 FDFKAYLIEKANKVNEALDQAVSVKNPPMIHEAMRYSLLAGGKRVRPILCIAACELVGGE 131
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFG---ESTAILAGDALLS 178
ES ++PAACA+EMIHTMSLIHDDLP + RR K +HE E A+LAGD+LL+
Sbjct: 132 ESNSVPAACAVEMIHTMSLIHDDLPCYGQRDLRRGK--AHETTKSSCEDVAVLAGDSLLA 189
Query: 179 LALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVD--IASEGKDVSLKELEYIH 236
+ E++A VSP + + ++G EGLVAG+ D I E + L +LE+IH
Sbjct: 190 FSFEYIATATKNVSPAKNFSRSRRISKSIGTEGLVAGQVADFVINGENQMFGLDQLEFIH 249
Query: 237 VHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTA 296
+HKTA LLEAAVV GA++GGGN EVE++R +ARCIGLLFQVVDDILDVTKSSEELGKTA
Sbjct: 250 IHKTAALLEAAVVLGAILGGGNPEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTA 309
Query: 297 GKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
GK GK TYPKLMG++ A+ FA +L A +L+ F+ KAAPL LA+YIA RQN
Sbjct: 310 GKRSCGGKTTYPKLMGLDGAREFADKLNKDAKNQLSEFDREKAAPLLALADYIAYRQN 367
>gi|125525184|gb|EAY73298.1| hypothetical protein OsI_01173 [Oryza sativa Indica Group]
Length = 314
Score = 339 bits (869), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 175/296 (59%), Positives = 224/296 (75%), Gaps = 2/296 (0%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
+F F+ Y+ +A+ VN ALD A+ P ++ ++MRYS+LAGGKRVRP+L +A+CELVGG
Sbjct: 19 SFDFQRYLSARADAVNDALDRAMPRGFPERLCESMRYSVLAGGKRVRPVLALAACELVGG 78
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
D + A P ACA+EMIHTMSLIHDD+P +D+D RR +P++H FGE TA+LAGDAL +LA
Sbjct: 79 DAAAATPVACAVEMIHTMSLIHDDMPCMDDDALRRGRPSNHVAFGEFTALLAGDALHALA 138
Query: 181 LEHVAVNIA--GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
EHVA GV DR +RA+AE+ SA G G+ AG+ D SEG VSL LEYIHVH
Sbjct: 139 FEHVARGCGDHGVPADRTLRAVAELGSASGTGGVAAGQVADKESEGLPVSLAMLEYIHVH 198
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KTA+LLEAA V GA++GGG EVERVR YARC+GLLFQVVDD+LD+T +SE+LGKTAGK
Sbjct: 199 KTARLLEAAAVSGAIVGGGADAEVERVRRYARCVGLLFQVVDDVLDMTSTSEQLGKTAGK 258
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
D+ + KATYPKL+G++ A+ +A +LL A EL F+A +AAPL LA +IA RQ+
Sbjct: 259 DVEADKATYPKLLGVDKAREYAADLLAMAEAELDGFDAERAAPLRHLARFIAYRQH 314
>gi|334119738|ref|ZP_08493823.1| Farnesyltranstransferase [Microcoleus vaginatus FGP-2]
gi|333457900|gb|EGK86521.1| Farnesyltranstransferase [Microcoleus vaginatus FGP-2]
Length = 308
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 164/298 (55%), Positives = 215/298 (72%), Gaps = 2/298 (0%)
Query: 58 PLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCEL 117
P +F Y++++ E + ALD A+ + P KI++AMRYSLLAGGKR+RP+LC+ASCEL
Sbjct: 12 PESSFDLSTYLVKRKEAIEVALDSALPVIYPEKIYEAMRYSLLAGGKRLRPILCLASCEL 71
Query: 118 VGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALL 177
GG S AMP ACALEMIHTMSLIHDDLP +DND+ RR K +H+V+GE AILAGD LL
Sbjct: 72 AGGTTSMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLL 131
Query: 178 SLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIH 236
+ A E +A V P +V++ IA + A G GLV G+ VD+ SEGK DVSL+ L YIH
Sbjct: 132 TYAFEFIATKTQNVPPQQVLQTIAHLARASGAAGLVGGQVVDLESEGKTDVSLETLNYIH 191
Query: 237 VHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTA 296
HKT LLEA VVCGA++ G +A +++R+ +A+ IGL FQ++DDILD+T + EELGKTA
Sbjct: 192 AHKTGALLEACVVCGAILAGASAADLQRLSRFAQNIGLAFQIIDDILDITATQEELGKTA 251
Query: 297 GKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
GKD+ +GK TYP L GIE ++ A +L+ A ++LA F SKA PL +A++I SR N
Sbjct: 252 GKDVQAGKVTYPSLWGIEESRRQASQLVADAKDQLAVF-GSKALPLLAIADFITSRSN 308
>gi|75274213|sp|Q9LUD9.1|GGPP3_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 3,
chloroplastic; Short=GGPP synthase 3; Short=GGPS3;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 3;
AltName: Full=Dimethylallyltranstransferase 3; AltName:
Full=Farnesyl diphosphate synthase 3; AltName:
Full=Farnesyltranstransferase 3; AltName:
Full=Geranyltranstransferase 3; Flags: Precursor
gi|9294377|dbj|BAB02387.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 360
Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 186/297 (62%), Positives = 235/297 (79%), Gaps = 4/297 (1%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F+ YMIRKAE VN ALD +V L+ P+ + +A+RYSLLAGGKRVRPLLCIA CELVGGD
Sbjct: 64 FDFKLYMIRKAESVNAALDVSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGD 123
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
E+ AM AACA+EMIHT SLIHDDLP +DN + RR KP +H+V+GE A+LAGDALL+LA
Sbjct: 124 EATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAF 183
Query: 182 EHVAVNIAG-VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKD---VSLKELEYIHV 237
EH+ V +G V+P+R++RA+ E+ A+G GLVAG+ +D+ASE + V L+ LE+IH+
Sbjct: 184 EHMTVVSSGLVAPERMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHL 243
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
HKTA LLEAA V G ++GGG E+E++R YARCIGLLFQVVDDILDVTKS+EELGKTAG
Sbjct: 244 HKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAG 303
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
KD+ +GK TYP+L+G+E +K A +L +A E+L F+ SKAAPL LA+YIA R N
Sbjct: 304 KDVMAGKLTYPRLIGLERSKEVAEKLRREAEEQLLGFDPSKAAPLVALASYIACRHN 360
>gi|297719791|ref|NP_001172257.1| Os01g0248701 [Oryza sativa Japonica Group]
gi|5042458|gb|AAD38295.1|AC007789_21 putative geranylgeranyl pyrophosphate synthase [Oryza sativa
Japonica Group]
gi|11320851|dbj|BAB18334.1| putative geranylgeranyl pyrophosphate synthase [Oryza sativa
Japonica Group]
gi|255673061|dbj|BAH90987.1| Os01g0248701 [Oryza sativa Japonica Group]
Length = 376
Score = 337 bits (865), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 174/296 (58%), Positives = 224/296 (75%), Gaps = 2/296 (0%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
+F F+ Y+ +A+ V+ ALD A+ P ++ ++MRYS+LAGGKRVRP+L +A+CELVGG
Sbjct: 81 SFDFQRYLSARADAVHDALDRAMPRGFPERLCESMRYSVLAGGKRVRPVLALAACELVGG 140
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
D + A P ACA+EMIHTMSLIHDD+P +D+D RR +P++H FGE TA+LAGDAL +LA
Sbjct: 141 DAAAATPVACAVEMIHTMSLIHDDMPCMDDDALRRGRPSNHVAFGEFTALLAGDALHALA 200
Query: 181 LEHVAVNIA--GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
EHVA GV DR +RA+AE+ SA G G+ AG+ D SEG VSL LEYIHVH
Sbjct: 201 FEHVARGCGDHGVPADRTLRAVAELGSASGTGGVAAGQVADKESEGLPVSLAMLEYIHVH 260
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KTA+LLEAA V GA++GGG EVERVR YARC+GLLFQVVDD+LD+T +SE+LGKTAGK
Sbjct: 261 KTARLLEAAAVSGAIVGGGADAEVERVRRYARCVGLLFQVVDDVLDMTSTSEQLGKTAGK 320
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
D+ + KATYPKL+G++ A+ +A +LL A EL F+A +AAPL LA +IA RQ+
Sbjct: 321 DVEADKATYPKLLGVDKAREYAADLLAMAEAELDGFDAERAAPLRHLARFIAYRQH 376
>gi|414887302|tpg|DAA63316.1| TPA: putative geranylgeranyl pyrophosphate synthase 2 [Zea mays]
Length = 441
Score = 337 bits (863), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 184/303 (60%), Positives = 224/303 (73%), Gaps = 10/303 (3%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQP-PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
F F+ YM +A VN+ALD A+ P +H AMRY+LLAGGKRVRP LC+A+C +VGG
Sbjct: 139 FNFKAYMEERAVAVNRALDAAIPAGGLPAALHDAMRYALLAGGKRVRPALCLAACAVVGG 198
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
ESWAMPAA A+EM+HTMSL+HDDLP +D+D+ RR KP H V+GE A+LAGDALLSL+
Sbjct: 199 PESWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGDALLSLS 258
Query: 181 LEHVAV---NIAGVSPD----RVVRAIAEMCSAMGVEGLVAGEFVDIASEG--KDVSLKE 231
H+A V P+ RVVRAI E+ +G EGLVAG+ VD+ G + V L+
Sbjct: 259 FHHMASVGSYPPAVDPEKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGTSQTVPLEL 318
Query: 232 LEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEE 291
LEYIH+HKTA LLEA+VV GA+IGGG ++E +R YAR IGLLFQVVDDILDVTKSSEE
Sbjct: 319 LEYIHLHKTAALLEASVVIGAIIGGGTDEQIEALRKYARSIGLLFQVVDDILDVTKSSEE 378
Query: 292 LGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIAS 351
LGKTAGKDLAS K TYPKL+G+ ++ FA +L+ A E+LA F+ KAAPL LANYIA
Sbjct: 379 LGKTAGKDLASDKTTYPKLLGLAKSREFAEKLVSDATEQLACFDEEKAAPLLHLANYIAH 438
Query: 352 RQN 354
RQN
Sbjct: 439 RQN 441
>gi|15231877|ref|NP_188071.1| geranylgeranyl diphosphate synthase 9 [Arabidopsis thaliana]
gi|75274215|sp|Q9LUE1.1|GGPP9_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 9,
chloroplastic; Short=GGPP synthase 9; Short=GGPS9;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 9;
AltName: Full=Dimethylallyltranstransferase 9; AltName:
Full=Farnesyl diphosphate synthase 9; AltName:
Full=Farnesyltranstransferase 9; AltName:
Full=Geranyltranstransferase 9; Flags: Precursor
gi|9294375|dbj|BAB02385.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|34365549|gb|AAQ65086.1| At3g14530 [Arabidopsis thaliana]
gi|332642014|gb|AEE75535.1| geranylgeranyl diphosphate synthase 9 [Arabidopsis thaliana]
Length = 360
Score = 337 bits (863), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 185/297 (62%), Positives = 235/297 (79%), Gaps = 4/297 (1%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F+ YMIRKAE VN ALD +V L P+ I +A+RYSLLAGGKRVRPLLCIA+CELVGGD
Sbjct: 64 FDFKLYMIRKAESVNAALDVSVPLLKPLTIQEAVRYSLLAGGKRVRPLLCIAACELVGGD 123
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
E+ AM AACA+EMIHT SLIHDDLP +DN + RR KP +H+V+GE A+LAGDALL+LA
Sbjct: 124 EATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAF 183
Query: 182 EHVAVNIAG-VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKD---VSLKELEYIHV 237
EH+ V +G V+P++++RA+ E+ A+G GLVAG+ +D+ASE + V L+ LE+IH+
Sbjct: 184 EHMTVVSSGLVAPEKMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHL 243
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
HKTA LLEAA V G ++GGG E+E++R YARCIGLLFQVVDDILDVTKS+EELGKTAG
Sbjct: 244 HKTAALLEAAAVLGVIMGGGTEQEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAG 303
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
KD+ +GK TYP+L+G+E ++ A +L +A E+L F+ SKAAPL LA+YIA R N
Sbjct: 304 KDVMAGKLTYPRLIGLEGSREVAEKLRREAEEQLLGFDPSKAAPLVALASYIACRHN 360
>gi|297847270|ref|XP_002891516.1| hypothetical protein ARALYDRAFT_891852 [Arabidopsis lyrata subsp.
lyrata]
gi|297337358|gb|EFH67775.1| hypothetical protein ARALYDRAFT_891852 [Arabidopsis lyrata subsp.
lyrata]
Length = 337
Score = 336 bits (862), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 175/314 (55%), Positives = 233/314 (74%), Gaps = 14/314 (4%)
Query: 55 TDIPLPTFPFEEYMIRKAEQVNKALDEAVVL--------QPPVKIHKAMRYSLLAGGKRV 106
T I P F YM KA+ +NKALD+++ L +P +++ +AMRY+LL+GGKRV
Sbjct: 24 TSIASPDSEFISYMNNKAKSINKALDDSIPLCNNSVPLWKPVLEVREAMRYTLLSGGKRV 83
Query: 107 RPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGE 166
RP+LC+ +CELVGG ES AMPAACA+EMIH SLI DDLP +D+D RR KP +H+VFGE
Sbjct: 84 RPMLCLVACELVGGQESTAMPAACAVEMIHASSLILDDLPCMDDDSLRRGKPTNHKVFGE 143
Query: 167 STAILAGDALLSLALEHVAVNIA-GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIAS--- 222
TAILA +AL+SLA+E + + GV+ +RV+RA+ EM A+G+EGLVAG+ D+A
Sbjct: 144 KTAILAANALMSLAVEQTLASTSLGVTSERVLRAVQEMARAVGIEGLVAGQAADLAGGRM 203
Query: 223 --EGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVD 280
E +D L+ LE+IH+HKTA L+EAA V GA++GGG+ E+ER+++YARC+GL+FQV+D
Sbjct: 204 SFETEDEGLRYLEFIHIHKTAVLVEAAAVVGAIMGGGSDEEIERLKSYARCVGLMFQVMD 263
Query: 281 DILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAA 340
D+LD TKSSEELGKTAGKDL +GK TYPK+MG+ENA+ +A L +A E L F++ K
Sbjct: 264 DVLDETKSSEELGKTAGKDLITGKLTYPKVMGVENAREYAKRLNREAQEHLQGFDSDKVV 323
Query: 341 PLYFLANYIASRQN 354
PL LA+YI RQN
Sbjct: 324 PLLSLADYIVKRQN 337
>gi|26450928|dbj|BAC42571.1| putative geranylgeranyl pyrophosphate synthase GGPS3 [Arabidopsis
thaliana]
Length = 360
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 185/297 (62%), Positives = 234/297 (78%), Gaps = 4/297 (1%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F+ YMIRKAE VN ALD +V L+ P+ + +A+RYSLLAGGKRVRPLLCIA CELVGGD
Sbjct: 64 FDFKLYMIRKAESVNAALDVSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGD 123
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
E+ AM AACA+EMIHT SLIHDDLP +DN + RR KP +H+V+GE A+LAGDALL+LA
Sbjct: 124 EATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAF 183
Query: 182 EHVAVNIAG-VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKD---VSLKELEYIHV 237
EH+ V +G V+P+R++RA+ E+ +G GLVAG+ +D+ASE + V L+ LE+IH+
Sbjct: 184 EHMTVVSSGLVAPERMIRAVVELARTIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHL 243
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
HKTA LLEAA V G ++GGG E+E++R YARCIGLLFQVVDDILDVTKS+EELGKTAG
Sbjct: 244 HKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAG 303
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
KD+ +GK TYP+L+G+E +K A +L +A E+L F+ SKAAPL LA+YIA R N
Sbjct: 304 KDVMAGKLTYPRLIGLERSKEVAEKLRREAEEQLLGFDPSKAAPLVALASYIACRHN 360
>gi|186510058|ref|NP_188073.2| geranylgeranyl diphosphate synthase 3 [Arabidopsis thaliana]
gi|332642016|gb|AEE75537.1| geranylgeranyl diphosphate synthase 3 [Arabidopsis thaliana]
Length = 360
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 185/297 (62%), Positives = 234/297 (78%), Gaps = 4/297 (1%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F+ YMIRKAE VN ALD +V L+ P+ + +A+RYSLLAGGKRVRPLLCIA CELVGGD
Sbjct: 64 FDFKLYMIRKAESVNAALDVSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGD 123
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
E+ AM AACA+EMIHT SLIHDDLP +DN + RR KP +H+V+GE A+LAGDALL+LA
Sbjct: 124 EATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAF 183
Query: 182 EHVAVNIAG-VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKD---VSLKELEYIHV 237
EH+ +G V+P+R++RA+ E+ A+G GLVAG+ +D+ASE + V L+ LE+IH+
Sbjct: 184 EHMTFVSSGLVAPERMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHL 243
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
HKTA LLEAA V G ++GGG E+E++R YARCIGLLFQVVDDILDVTKS+EELGKTAG
Sbjct: 244 HKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAG 303
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
KD+ +GK TYP+L+G+E +K A +L +A E+L F+ SKAAPL LA+YIA R N
Sbjct: 304 KDVMAGKLTYPRLIGLERSKEVAEKLRREAEEQLLGFDPSKAAPLVALASYIACRHN 360
>gi|297834334|ref|XP_002885049.1| hypothetical protein ARALYDRAFT_478873 [Arabidopsis lyrata subsp.
lyrata]
gi|297330889|gb|EFH61308.1| hypothetical protein ARALYDRAFT_478873 [Arabidopsis lyrata subsp.
lyrata]
Length = 360
Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 181/297 (60%), Positives = 234/297 (78%), Gaps = 4/297 (1%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F+ YMI KA+ VN ALD +V L+ P+ + +A+RYSLLAGGKRVRP+LCIASCELVGG+
Sbjct: 64 FDFKSYMINKAKSVNAALDISVPLREPLTVQEAVRYSLLAGGKRVRPMLCIASCELVGGN 123
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
E+ AMPAACA+EMIHT SLIHDDLP +DN + RR KP +H+VFGE A+LAGDALL+LA
Sbjct: 124 EATAMPAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGDALLALAF 183
Query: 182 EHVAVNIAG-VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG---KDVSLKELEYIHV 237
EH+ V +G V P+R++RA+AE+ A+G GLVAG+ +D+ASE D L+ LE+IH+
Sbjct: 184 EHMTVVSSGLVPPERMIRAVAELARAIGTTGLVAGQMIDLASERLNPHDAGLERLEFIHL 243
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
HKTA LLEAA V G ++GGG E+E++R YARCIGLLFQVVDDILDVT+S+EELGKTAG
Sbjct: 244 HKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTESTEELGKTAG 303
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
KDL +GK TYP+L+G+E ++ A +L +A E++ F++ +APL LA+YIA R N
Sbjct: 304 KDLMAGKLTYPRLIGLERSREVAEKLRKEAEEQVLGFDSENSAPLVALASYIACRHN 360
>gi|148239905|ref|YP_001225292.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7803]
gi|147848444|emb|CAK23995.1| Geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7803]
Length = 312
Score = 334 bits (857), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 167/293 (56%), Positives = 218/293 (74%), Gaps = 1/293 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F Y+ + E V ++LD A+ + P + ++MRYSLLAGGKR+RP+LC+A+CELVGGD
Sbjct: 21 FDFSSYLAKTRELVEQSLDAALGPERPESLRESMRYSLLAGGKRLRPILCLAACELVGGD 80
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
S AMP A ALEMIHTMSLIHDDLP +DND+ RR +P +H+V+G++ AILAGDALLS A
Sbjct: 81 ASLAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAMAILAGDALLSRAF 140
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
E VAV GV P+R+++ +AE+ G GLV G+ VD+ SEG++V L+ LEYIH+HKTA
Sbjct: 141 EMVAVRSEGVPPERLLKVVAELSLVSGAPGLVGGQVVDLESEGREVDLETLEYIHLHKTA 200
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
LL A VV GA+IGG +A +V+ +R YA IGL FQ+VDDILDVT SS+ LGKTAGKDL
Sbjct: 201 ALLRACVVTGALIGGADASQVDAMRTYANGIGLAFQIVDDILDVTASSDVLGKTAGKDLI 260
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K TYPKL+G+E +++ A EL+ QA L ++ KA PL LA+Y+ASR
Sbjct: 261 ADKTTYPKLLGLEPSRARALELVAQAKAVLEPWK-DKAQPLLALADYVASRDR 312
>gi|308080812|ref|NP_001183944.1| putative geranylgeranyl pyrophosphate synthase 2 [Zea mays]
gi|148535921|gb|ABQ85647.1| putative geranylgeranyl pyrophosphate synthase 2 [Zea mays]
Length = 361
Score = 334 bits (857), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 183/304 (60%), Positives = 224/304 (73%), Gaps = 12/304 (3%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQP-PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
F F+ YM +A VN+ALD A+ P +H AMRY+LLAGGKRVRP LC+A+C +VGG
Sbjct: 59 FNFKAYMEERAVAVNRALDAAIPAGGLPAALHDAMRYALLAGGKRVRPALCLAACAVVGG 118
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
ESWAMPAA A+EM+HTMSL+HDDLP +D+D+ RR KP H V+GE A+LAGDALLSL+
Sbjct: 119 PESWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGDALLSLS 178
Query: 181 LEHVAVNIAGV--------SPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG--KDVSLK 230
H+A ++ P RVVRAI E+ +G EGLVAG+ VD+ G + V L+
Sbjct: 179 FHHMA-SVGSYPPAVDPEKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGTSQTVPLE 237
Query: 231 ELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSE 290
LEYIH+HKTA LLEA+VV GA+IGGG ++E +R YAR IGLLFQVVDDILDVTKSSE
Sbjct: 238 LLEYIHLHKTAALLEASVVIGAIIGGGTDEQIEALRKYARSIGLLFQVVDDILDVTKSSE 297
Query: 291 ELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIA 350
ELGKTAGKDLAS K TYPKL+G+ ++ FA +L+ A E+LA F+ KAAPL LANYIA
Sbjct: 298 ELGKTAGKDLASDKTTYPKLLGLAKSREFAEKLVSDATEQLACFDEEKAAPLLHLANYIA 357
Query: 351 SRQN 354
RQN
Sbjct: 358 HRQN 361
>gi|88808953|ref|ZP_01124462.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7805]
gi|88786895|gb|EAR18053.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7805]
Length = 315
Score = 334 bits (856), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 168/293 (57%), Positives = 216/293 (73%), Gaps = 1/293 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F Y+ + V ALD A+ + P + ++MRYSLLAGGKR+RP+LC+A+CELVGGD
Sbjct: 24 FDFSAYLAKTRNLVEGALDAALGPERPESLRESMRYSLLAGGKRLRPILCLAACELVGGD 83
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
S AMP A ALEMIHTMSLIHDDLP +DND+ RR +P +H+V+G++ AILAGDALLS A
Sbjct: 84 ASLAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAMAILAGDALLSRAF 143
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
E V++ GV P+R+++ +AE+ G GLV G+ VD+ SEG++V L+ LEYIH+HKTA
Sbjct: 144 EMVSLRSPGVPPERLLKVVAELALVSGAPGLVGGQVVDLESEGREVDLETLEYIHLHKTA 203
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
LL A VV GA+IGG +A +VE +R YA IGL FQ+VDDILDVT SSE LGKTAGKDL
Sbjct: 204 ALLRACVVTGALIGGADANQVEAMRTYANGIGLAFQIVDDILDVTASSEVLGKTAGKDLI 263
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K TYPKL+G+E +++ A EL+ QA L + SKA PL LA+Y+ASR
Sbjct: 264 ADKTTYPKLLGLEPSRARALELVAQAKSALEPW-TSKAQPLLALADYVASRDR 315
>gi|424513337|emb|CCO65959.1| geranylgeranyl pyrophosphate synthase [Bathycoccus prasinos]
Length = 376
Score = 333 bits (854), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 166/296 (56%), Positives = 216/296 (72%), Gaps = 5/296 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
F +Y+ K + +AL ++V P ++H++MRYSLLAGGKR+RP L IA+CE+VGG +
Sbjct: 81 FAKYVKEKNAAIEQALSDSVPTIYPERLHESMRYSLLAGGKRIRPCLAIAACEMVGGAQE 140
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
MP ACALEMIHTMSLIHDDLP +DND+ RR P +H+V+GE AILAGDALLS A E+
Sbjct: 141 VVMPTACALEMIHTMSLIHDDLPMMDNDDFRRGVPTNHKVYGEEMAILAGDALLSHAFEY 200
Query: 184 VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIAS-----EGKDVSLKELEYIHVH 238
+A GV ++++R IA++ +G EGLV G+ VDI S EGK VSL+ L+YIH H
Sbjct: 201 IARETKGVPAEKILRVIADVGKCVGSEGLVGGQVVDIESEGLAMEGKPVSLETLKYIHAH 260
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT LLE AVV GA++GGG ++ER+ YA IGL FQVVDDILD T +SEELGKTAGK
Sbjct: 261 KTGALLETAVVSGAILGGGTEEDIERLGKYAYDIGLAFQVVDDILDCTATSEELGKTAGK 320
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
D+A GKATYP L+G+E ++ A EL+ A E+L+ ++ KAAPL LA+YI +R+N
Sbjct: 321 DVAVGKATYPSLLGLEESQRIADELIKSAKEQLSVYDQKKAAPLIGLADYIKNRKN 376
>gi|86605096|ref|YP_473859.1| geranylgeranyl diphosphate synthase [Synechococcus sp. JA-3-3Ab]
gi|86553638|gb|ABC98596.1| geranylgeranyl diphosphate synthase [Synechococcus sp. JA-3-3Ab]
Length = 297
Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 165/294 (56%), Positives = 214/294 (72%), Gaps = 1/294 (0%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
TF + Y+ ++ +QV +AL A+V P +I++AMRYSLLAGGKR+RP+LC+A+CEL GG
Sbjct: 5 TFNLDTYLSQRQQQVEEALSAALVPAYPERIYEAMRYSLLAGGKRLRPILCLAACELAGG 64
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
AMP ACALEMIHTMSLIHDDLP +DND+ RR KP +H+VFGE AILAGDALL+ A
Sbjct: 65 SVEQAMPTACALEMIHTMSLIHDDLPAMDNDDFRRGKPTNHKVFGEDIAILAGDALLAYA 124
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKT 240
EH+A GV P V++ IA + A+ GLV G+ VD+ SEGK +SL+ LEYIH HKT
Sbjct: 125 FEHIASQTRGVPPQLVLQVIARIGHAVAATGLVGGQVVDLESEGKAISLETLEYIHSHKT 184
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
LLEA+VV G ++ G + + R+ +YAR IGL FQ+VDDILDVT +SE+LGKTAGKD
Sbjct: 185 GALLEASVVSGGILAGADEELLARLSHYARDIGLAFQIVDDILDVTATSEQLGKTAGKDQ 244
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A+ KATYP L+G+E ++ A EL+ A E L + S+A PL LA++I RQ+
Sbjct: 245 AAAKATYPSLLGLEASRQKAEELIQSAKEALRPY-GSQAEPLLALADFITRRQH 297
>gi|428320077|ref|YP_007117959.1| Farnesyltranstransferase [Oscillatoria nigro-viridis PCC 7112]
gi|428243757|gb|AFZ09543.1| Farnesyltranstransferase [Oscillatoria nigro-viridis PCC 7112]
Length = 308
Score = 330 bits (846), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 160/298 (53%), Positives = 211/298 (70%), Gaps = 2/298 (0%)
Query: 58 PLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCEL 117
P +F Y++++ E + ALD A+ + P I++AMRYSLLAGGKR+RP+LC+ASCEL
Sbjct: 12 PESSFDLSAYLVKRKEAIEVALDSALPVIYPETIYEAMRYSLLAGGKRLRPILCLASCEL 71
Query: 118 VGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALL 177
GG S A+P ACALEMIHTMSLIHDDLP +DND+ RR K +H+V+GE AILAGD LL
Sbjct: 72 AGGTTSMAIPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLL 131
Query: 178 SLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIH 236
+ A E +A V P +V++ IA + A G GLV G+ VD+ SEGK DVSL+ L YIH
Sbjct: 132 TYAFEFIATKTQNVPPQQVLQTIAHLARASGAAGLVGGQVVDLESEGKTDVSLETLNYIH 191
Query: 237 VHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTA 296
HKT LLEA VVCG ++ G + +++R+ +A+ IGL FQ++DDILD+T + EELGKTA
Sbjct: 192 AHKTGALLEACVVCGGILAGASTADLQRLSRFAQNIGLAFQIIDDILDITATQEELGKTA 251
Query: 297 GKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
GKD+ +GK TYP L GIE ++ A +L+ A +LA F SKA PL +A++I SR N
Sbjct: 252 GKDVQAGKVTYPSLWGIEESRRQASQLVADAKAQLAVF-GSKALPLLAIADFITSRSN 308
>gi|15222767|ref|NP_175376.1| geranylgeranyl pyrophosphate synthase 1 [Arabidopsis thaliana]
gi|85540951|sp|O22043.2|GGPP6_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 6,
mitochondrial; Short=GGPP synthase 6; Short=GGPS6;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 6;
AltName: Full=Dimethylallyltranstransferase 6; AltName:
Full=Farnesyl diphosphate synthase 6; AltName:
Full=Farnesyltranstransferase 6; AltName:
Full=Geranyltranstransferase 6; Flags: Precursor
gi|5430748|gb|AAD43148.1|AC007504_3 geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|40823199|gb|AAR92266.1| At1g49530 [Arabidopsis thaliana]
gi|45752710|gb|AAS76253.1| At1g49530 [Arabidopsis thaliana]
gi|332194318|gb|AEE32439.1| geranylgeranyl pyrophosphate synthase 1 [Arabidopsis thaliana]
Length = 336
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 171/305 (56%), Positives = 226/305 (74%), Gaps = 14/305 (4%)
Query: 64 FEEYMIRKAEQVNKALDEAVVL--------QPPVKIHKAMRYSLLAGGKRVRPLLCIASC 115
F YM KA+ +NKALD ++ L +P +++HKAMRY+LL GGKRVRP+LC+ +C
Sbjct: 32 FISYMKNKAKSINKALDNSIPLCNNFVPLWEPVLEVHKAMRYTLLPGGKRVRPMLCLVAC 91
Query: 116 ELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDA 175
ELVGG ES AMPAACA+EMIH SLI DDLP +D+D RR KP +H+VFGE T+ILA +A
Sbjct: 92 ELVGGQESTAMPAACAVEMIHAASLILDDLPCMDDDSLRRGKPTNHKVFGEKTSILASNA 151
Query: 176 LLSLALEHVAVNIA-GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASE-----GKDVSL 229
L SLA++ + + GV+ +RV+RA+ EM A+G EGLVAG+ D+A E +D L
Sbjct: 152 LRSLAVKQTLASTSLGVTSERVLRAVQEMARAVGTEGLVAGQAADLAGERMSFKNEDDEL 211
Query: 230 KELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSS 289
+ LE +HVHKTA L+EAA V GA++GGG+ E+ER+++YARC+GL+FQV+DD+LD TKSS
Sbjct: 212 RYLELMHVHKTAVLVEAAAVVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDVLDETKSS 271
Query: 290 EELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYI 349
EELGKTAGKDL +GK TYPK+MG++NA+ +A L +A E L F++ K PL LA+YI
Sbjct: 272 EELGKTAGKDLITGKLTYPKVMGVDNAREYAKRLNREAQEHLQGFDSDKVVPLLSLADYI 331
Query: 350 ASRQN 354
RQN
Sbjct: 332 VKRQN 336
>gi|145352919|ref|XP_001420781.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581016|gb|ABO99074.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 312
Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 160/294 (54%), Positives = 212/294 (72%), Gaps = 3/294 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
F Y+ ++ +ALD +V + P ++ ++MRYSLLAGGKR+RP LC+A+CELVGG
Sbjct: 19 FNAYIKNVNAEIERALDASVPMHYPERLSESMRYSLLAGGKRIRPALCLAACELVGGTME 78
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
AMP ACALEMIHTMSLIHDDLP +DND+ RR KP +H+V+GE AILAGDALLS A E+
Sbjct: 79 VAMPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEEMAILAGDALLSHAFEY 138
Query: 184 VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKD---VSLKELEYIHVHKT 240
+ GVS D+V+R I ++ +G EGLV G+ VDI SEG D V++ L+YIH HKT
Sbjct: 139 IGRETKGVSADKVLRVIVDVGKCVGSEGLVGGQVVDIMSEGADEGTVTIDTLKYIHAHKT 198
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
LLE +V GA++GG + ++ ++ YA+ IGL FQVVDDILD T +SEELGKTAGKD+
Sbjct: 199 GALLEVSVTAGAILGGASEEQIGKLERYAQNIGLAFQVVDDILDCTATSEELGKTAGKDM 258
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A GK+TYP L+G+E +K A +L+ +A +EL F+ K PL LA+YI +R+N
Sbjct: 259 AVGKSTYPSLVGMEESKRIAADLISKAKQELEGFDPVKVKPLIGLADYIQNRKN 312
>gi|2578822|dbj|BAA23157.1| geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 343
Score = 327 bits (839), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 170/305 (55%), Positives = 227/305 (74%), Gaps = 14/305 (4%)
Query: 64 FEEYMIRKAEQVNKALDEAVVL--------QPPVKIHKAMRYSLLAGGKRVRPLLCIASC 115
F YM KA+ +NKALD ++ L +P +++HKAMRY+LL+GGKRVRP+LC+ +C
Sbjct: 39 FISYMNNKAKSINKALDNSIPLCNNSVPLWEPVLEVHKAMRYTLLSGGKRVRPMLCLVAC 98
Query: 116 ELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDA 175
ELVGG ES AMPAACA+EMIH SLI DDLP +D+D RR P +H+VFGE T+ILA +A
Sbjct: 99 ELVGGQESTAMPAACAVEMIHAASLILDDLPCMDDDSLRRGIPTNHKVFGEKTSILASNA 158
Query: 176 LLSLALEHVAVNIA-GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASE-----GKDVSL 229
L+SLA++ + + GV+ +RV+RA+ EM A+G EGLVAG+ D+A E +D L
Sbjct: 159 LMSLAVKQTLASTSLGVTSERVLRAVQEMARAVGTEGLVAGQAADLAGERMSFKNEDDEL 218
Query: 230 KELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSS 289
+ LE +HVHKTA L+EAA V GA++GGG+ E+ER+++YARC+GL+FQV+DD+LD TKSS
Sbjct: 219 RYLELMHVHKTAVLVEAAAVVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDVLDETKSS 278
Query: 290 EELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYI 349
EELGKTAGKDL +GK TYPK+MG++NA+ +A L +A E L F++ K PL LA+YI
Sbjct: 279 EELGKTAGKDLITGKLTYPKVMGVDNAREYAKRLNREAQEHLQGFDSDKVVPLLSLADYI 338
Query: 350 ASRQN 354
RQN
Sbjct: 339 VKRQN 343
>gi|21592547|gb|AAM64496.1| putative geranylgeranyl pyrophosphate synthase GGPS3 [Arabidopsis
thaliana]
Length = 360
Score = 327 bits (839), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 186/297 (62%), Positives = 234/297 (78%), Gaps = 4/297 (1%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F+ YMIRKAE VN ALD +V L+ P+ + +A+RYSLLAGGKRVRPLLCIA CELVGGD
Sbjct: 64 FDFKLYMIRKAESVNAALDVSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGD 123
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
E+ AM AACA+EMIHT SLIHDDLP +DN + RR KP +H+V+GE A+LAGDALL+LA
Sbjct: 124 EATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAF 183
Query: 182 EHVAVNIAG-VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKD---VSLKELEYIHV 237
EH+ V +G V+P+R++RA+ E+ A+G GLVAG+ +D+ASE + V L+ LE+IH+
Sbjct: 184 EHMTVVSSGLVAPERMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHL 243
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
HKTA LLEAA V G ++GGG E+E++R YARCIGLLFQVVDDI DVTKS+EELGKTAG
Sbjct: 244 HKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDIPDVTKSTEELGKTAG 303
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
KD+ +GK TYP+L+G+E +K A EL +A E+L F+ SKAAPL LA+YIA R N
Sbjct: 304 KDVMAGKLTYPRLIGLERSKEVAEELRREAEEQLLGFDPSKAAPLVALASYIACRHN 360
>gi|15228704|ref|NP_189589.1| geranylgeranyl diphosphate synthase 11 [Arabidopsis thaliana]
gi|75335025|sp|Q9LIA0.1|GGPPB_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 11,
chloroplastic; Short=GGPP synthase 11; Short=GGPS11;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 11;
AltName: Full=Dimethylallyltranstransferase 11; AltName:
Full=Farnesyl diphosphate synthase 11; AltName:
Full=Farnesyltranstransferase 11; AltName:
Full=Geranyltranstransferase 11; Flags: Precursor
gi|11994525|dbj|BAB02589.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|67633672|gb|AAY78760.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|332644062|gb|AEE77583.1| geranylgeranyl diphosphate synthase 11 [Arabidopsis thaliana]
Length = 357
Score = 327 bits (838), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 181/297 (60%), Positives = 234/297 (78%), Gaps = 4/297 (1%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F+ YMIRKAE V+ AL+ +V LQ P+ I +A+RYSLLAGGKRVRPLLCIA+CELVGGD
Sbjct: 61 FDFKSYMIRKAESVSAALNVSVPLQEPLTIQEAVRYSLLAGGKRVRPLLCIAACELVGGD 120
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
E+ AM AACA+EMIHT SLIHDDLP +D+ + RR KP +H+ FGE A+LAGDALL+LA
Sbjct: 121 EATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKEFGEDMAVLAGDALLALAF 180
Query: 182 EHVAVNIAG-VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG---KDVSLKELEYIHV 237
EH+ G V+P+R++RA+ E+ A+G +GLVAG+ D+ S+G DV L+ LE+IH+
Sbjct: 181 EHMTFVSNGLVAPERMIRAVMELAKAIGTKGLVAGQVTDLCSQGLNPDDVGLERLEFIHL 240
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
HKTA LLEAA V GA++GGG E+E++R YARCIGLLFQVVDDILDVT+S++ELGKTAG
Sbjct: 241 HKTAALLEAAAVLGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTESTKELGKTAG 300
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
KD+ +GK TYP+L+G+E ++ A +L +A E+L F++ KAAPL LA+YIA R N
Sbjct: 301 KDVMAGKLTYPRLIGLERSREVAEKLRREAAEQLLGFDSDKAAPLVALASYIACRHN 357
>gi|242050680|ref|XP_002463084.1| hypothetical protein SORBIDRAFT_02g037510 [Sorghum bicolor]
gi|241926461|gb|EER99605.1| hypothetical protein SORBIDRAFT_02g037510 [Sorghum bicolor]
Length = 371
Score = 327 bits (838), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 187/304 (61%), Positives = 228/304 (75%), Gaps = 12/304 (3%)
Query: 62 FPFEEYMIRKAEQVNKALDEAV-VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
F F+ YM +A VN+ALD A+ +PP +H AMRY+LLAGGKRVRP LC+A+C +VGG
Sbjct: 69 FDFKAYMGERAVAVNRALDAAIPAGEPPAALHDAMRYALLAGGKRVRPALCLAACAVVGG 128
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
E+WAMPAA A+EM+HTMSL+HDDLP +D+D+ RR KP H V+GE A+LAGDALLSL+
Sbjct: 129 PEAWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGDALLSLS 188
Query: 181 LEHVAVNIAGVSPD--------RVVRAIAEMCSAMGVEGLVAGEFVDIASEGKD--VSLK 230
H+A ++ PD RVVRAI E+ +G EGLVAG+ VD+ G V L+
Sbjct: 189 FHHMA-SVGSYPPDVDPEKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGTSEPVPLE 247
Query: 231 ELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSE 290
LEYIH+HKTA LLEA+VV GA+IGGG ++ER+R YAR IGLLFQVVDDILDVTKSSE
Sbjct: 248 RLEYIHLHKTAALLEASVVIGAIIGGGTDEQIERLRKYARSIGLLFQVVDDILDVTKSSE 307
Query: 291 ELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIA 350
ELGKTAGKDLAS K TYPKL+G+E ++ FA +LL AIE+L F+ KAAPL LANYIA
Sbjct: 308 ELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDAIEQLDCFDKEKAAPLLHLANYIA 367
Query: 351 SRQN 354
RQN
Sbjct: 368 HRQN 371
>gi|359477279|ref|XP_002275812.2| PREDICTED: geranylgeranyl pyrophosphate synthase 1,
chloroplastic-like [Vitis vinifera]
Length = 380
Score = 327 bits (837), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 166/298 (55%), Positives = 228/298 (76%), Gaps = 3/298 (1%)
Query: 60 PTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
P F F+ YM+ KA+ VN+ALD A+ L+ P++IHKAMRYSLL GGKR+ P++CI++CELVG
Sbjct: 83 PDFNFKAYMLEKAKSVNQALDTAIPLREPLEIHKAMRYSLLDGGKRIHPIVCISACELVG 142
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
G ES AMP CA+EM+H +SL+ DDLP +DND+ RR KP++H+ FGES ILA DALL+L
Sbjct: 143 GQESTAMPVVCAVEMLHVVSLMQDDLPCMDNDDIRRGKPSNHKAFGESVTILAVDALLAL 202
Query: 180 ALEHVA-VNIAGVSPDRV-VRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIH 236
A EHVA ++ GV P V V AI E+ ++G +GLVAG+F+D++SEG ++ L+ LE IH
Sbjct: 203 AFEHVATMSTVGVVPPMVTVHAIQELARSIGSQGLVAGQFLDLSSEGSPEIGLEGLESIH 262
Query: 237 VHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTA 296
++K LLEA+ V GA++GGG++ ++E +R + RC+GLL+QVVDDILD+TKS++ELGKTA
Sbjct: 263 INKAGPLLEASAVIGAMLGGGSSEQMEILRKFGRCVGLLYQVVDDILDITKSTQELGKTA 322
Query: 297 GKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
GKDL + K TYPKL+GIE ++ FA +L G A + L+ F+ KAA L + N+ RQN
Sbjct: 323 GKDLVADKVTYPKLVGIEKSREFAEKLNGDAWDMLSEFDQEKAASLLAMVNFATYRQN 380
>gi|86609315|ref|YP_478077.1| geranylgeranyl diphosphate synthase [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86557857|gb|ABD02814.1| geranylgeranyl diphosphate synthase [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 297
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 161/294 (54%), Positives = 211/294 (71%), Gaps = 1/294 (0%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
TF + Y+ ++ +QV +AL A+V P +I++AMRYSLLAGGKR+RP+LC+A+CEL GG
Sbjct: 5 TFNLKAYLSQRQQQVEEALSAALVPAYPERIYEAMRYSLLAGGKRLRPILCLAACELAGG 64
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
A+P ACALEMIHTMSLIHDDLP +DND+ RR KP +H+VFGE AILAGDALL+ A
Sbjct: 65 TVEQALPTACALEMIHTMSLIHDDLPAMDNDDFRRGKPTNHKVFGEDIAILAGDALLAFA 124
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKT 240
EH+A GV P V++ IA + A+ GLV G+ VD+ SEGK +SL+ LEYIH HKT
Sbjct: 125 FEHIASQTQGVPPQLVLQVIARIGHAVAATGLVGGQVVDLESEGKAISLETLEYIHSHKT 184
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
LLE +VV G ++ GG+ + + YAR IGL FQ+VDDILD+T +SE+LGKTAGKD
Sbjct: 185 GALLEVSVVSGGILAGGDEELLAHLSRYARDIGLAFQIVDDILDITATSEQLGKTAGKDQ 244
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A+ KATYP L+G+E ++ A EL+ A E L + +A PL LA++I RQ+
Sbjct: 245 AAAKATYPSLLGLEASRQKAEELIQSAKETLRPY-GPRAEPLLALADFITRRQH 297
>gi|428215155|ref|YP_007088299.1| geranylgeranyl pyrophosphate synthase [Oscillatoria acuminata PCC
6304]
gi|428003536|gb|AFY84379.1| geranylgeranyl pyrophosphate synthase [Oscillatoria acuminata PCC
6304]
Length = 308
Score = 324 bits (831), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 160/294 (54%), Positives = 209/294 (71%), Gaps = 2/294 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F Y+ + V ALD+++ ++PP I++AMRYSLLAGGKR+RP+LC+ASCELVGG
Sbjct: 16 FDLSTYLGERQALVEAALDQSLPIKPPSTIYEAMRYSLLAGGKRLRPILCLASCELVGGT 75
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
AMP ACALEM+HTMSLIHDDLP +DND+ RR K +H+V+G+ AILAGD LL A
Sbjct: 76 VEMAMPTACALEMVHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDIAILAGDGLLVYAF 135
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKT 240
E VA V RV++AIA + A G +G+V G+ VDI EGK D +++ L +IH HKT
Sbjct: 136 EVVATQTQNVPAPRVLKAIAHLAHAFGADGVVGGQVVDIQCEGKLDTTVETLHFIHTHKT 195
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
LLEA VVCGA++GG +++R+ YA+ IGL FQ++DDILD+TK+ EELGKTAGKDL
Sbjct: 196 GALLEACVVCGAILGGAADEDLQRLSRYAQNIGLAFQIIDDILDITKTQEELGKTAGKDL 255
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ KATYP + G+E + A EL+ QA ELA F +KA PL LA++I +R N
Sbjct: 256 QAQKATYPSIWGLEESTRQAQELIEQAKAELASF-GNKAIPLLTLADFITNRSN 308
>gi|357122245|ref|XP_003562826.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Brachypodium distachyon]
Length = 356
Score = 323 bits (829), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 185/304 (60%), Positives = 227/304 (74%), Gaps = 12/304 (3%)
Query: 62 FPFEEYMIRKAEQVNKALDEAV-VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
F F+ YM +A VN+ALD A+ +PP +H AMRY+LLAGGKRVRP LC+ASC +VGG
Sbjct: 54 FDFKAYMGERAVAVNQALDAAIPAGEPPAALHDAMRYALLAGGKRVRPALCLASCVVVGG 113
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
E+WAM A A+EM+HTMSL+HDDLP +D+D+ RR KP H V+GE A+LAGDALLSL+
Sbjct: 114 REAWAMAPAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGDALLSLS 173
Query: 181 LEHVAVNIAGVSPD--------RVVRAIAEMCSAMGVEGLVAGEFVDIASEG--KDVSLK 230
H+A ++ PD RVVR I E+ +G EGLVAG+ VD+ G + V L
Sbjct: 174 FGHMA-SMDSYPPDVDPEKHPARVVRGIGELARCIGSEGLVAGQVVDLEMTGSTETVPLD 232
Query: 231 ELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSE 290
LEYIH+HKTA LLEA+VV GA+IGGG+ ++ER+R YAR IGLLFQVVDDILDVTKSSE
Sbjct: 233 RLEYIHLHKTAALLEASVVIGAIIGGGSDEQIERLRKYARSIGLLFQVVDDILDVTKSSE 292
Query: 291 ELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIA 350
ELGKTAGKDLAS K TYPKL+G+E ++ FA +LL A E+LA F+ KAAPL +LANYIA
Sbjct: 293 ELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLCDAKEQLADFDKEKAAPLLYLANYIA 352
Query: 351 SRQN 354
RQN
Sbjct: 353 YRQN 356
>gi|308809942|ref|XP_003082280.1| geranylgeranyl diphosphate synthase (ISS) [Ostreococcus tauri]
gi|116060748|emb|CAL57226.1| geranylgeranyl diphosphate synthase (ISS) [Ostreococcus tauri]
Length = 345
Score = 323 bits (829), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 168/345 (48%), Positives = 226/345 (65%), Gaps = 16/345 (4%)
Query: 25 KSPYRAPIFRFKLFSKKIKARHAQNSVFESTDIPLPTFP------------FEEYMIRKA 72
+S RAP R + + I R ++ T+ P F Y+
Sbjct: 2 RSTARAPSARV-VARRAIGGRRGTDARRARTEASAPATSGASSTSADSEREFNAYIKGVN 60
Query: 73 EQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACAL 132
++ +ALD +V + P ++ ++MRYSLLAGGKR+RP LC+A+CELVGGD AMP ACAL
Sbjct: 61 AKIERALDASVPVHYPERLSESMRYSLLAGGKRIRPALCLAACELVGGDMETAMPTACAL 120
Query: 133 EMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVS 192
EMIHTMSLIHDDLP +DND+ RR KP +H+V+GE AILAGDALLS A E++ G S
Sbjct: 121 EMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEEMAILAGDALLSHAFEYIGRETKGAS 180
Query: 193 PDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG---KDVSLKELEYIHVHKTAKLLEAAVV 249
++V+R I ++ +G EGLV G+ VDI SEG ++V++ L+YIH HKT LLE +V
Sbjct: 181 AEKVLRVIVDVGKCVGSEGLVGGQVVDIMSEGAGPENVTVDTLKYIHAHKTGALLEVSVT 240
Query: 250 CGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPK 309
GA++GG + ++ ++ YA+ IGL FQVVDDILD T SSEELGKTAGKD+A GK TYP
Sbjct: 241 AGAILGGASEEQIGKLERYAQNIGLAFQVVDDILDCTASSEELGKTAGKDVAVGKTTYPS 300
Query: 310 LMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L+G+E +K A +L+ +A EL F+ K PL LA+YI +R+N
Sbjct: 301 LVGMEESKRIAADLISKAKAELEGFDPVKVRPLIGLADYIQNRKN 345
>gi|15231869|ref|NP_188069.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana]
gi|332642012|gb|AEE75533.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana]
Length = 284
Score = 323 bits (828), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 171/277 (61%), Positives = 221/277 (79%), Gaps = 4/277 (1%)
Query: 82 AVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLI 141
+V L+ P+ + +A+RYSLLAGGKRVRPLLCIA CELVGGDE+ AM AACA+EMIHT SLI
Sbjct: 8 SVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLI 67
Query: 142 HDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAG-VSPDRVVRAI 200
HDDLP +DN + RR KP +H+VFGE A+LAGDALL+LA EH+ V +G V+ +R++RA+
Sbjct: 68 HDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGLVASERMIRAV 127
Query: 201 AEMCSAMGVEGLVAGEFVDIASEG---KDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGG 257
E+ A+G +GLVAG+ VD++SE DV L+ LE+IH+HKTA LLEAA V GA++GGG
Sbjct: 128 VELARAIGTKGLVAGQVVDLSSERLNPHDVGLERLEFIHLHKTAALLEAAAVIGAIMGGG 187
Query: 258 NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAK 317
E+E++R YARCIGLLFQVVDDILDVTKS+EELGKTAGKD+ +GK TYP+L+G+E ++
Sbjct: 188 TEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGLERSR 247
Query: 318 SFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A +L +A E+L FE+ KAAPL LA+YI+ R +
Sbjct: 248 EVAEKLSREAEEQLLGFESDKAAPLVALASYISCRND 284
>gi|254409375|ref|ZP_05023156.1| polyprenyl synthetase superfamily [Coleofasciculus chthonoplastes
PCC 7420]
gi|196183372|gb|EDX78355.1| polyprenyl synthetase superfamily [Coleofasciculus chthonoplastes
PCC 7420]
Length = 309
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 158/294 (53%), Positives = 207/294 (70%), Gaps = 2/294 (0%)
Query: 60 PTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
P F Y+ + QV ALD ++ L P KI++AMRYSLLAGGKR+RP+LC+A+CEL+G
Sbjct: 15 PAFDLSTYLKERKAQVEAALDRSLPLGYPEKIYEAMRYSLLAGGKRLRPILCLATCELMG 74
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
G AMP ACALEM+HTMSLIHDDLP +DND+ RR K +H+V+GE AILAGD LL+
Sbjct: 75 GTMEMAMPTACALEMLHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDMAILAGDGLLAY 134
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVH 238
A E+VA GV +RV++ IA + +G GLV G+ VD+ SEGK D+ + L YIH H
Sbjct: 135 AFEYVATQTQGVPAERVLQVIARLGRTVGAAGLVGGQVVDLESEGKSDIQEETLHYIHTH 194
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT LLE VVCG ++ G ++ER+ YA+ IGL FQ++DDILD+T + EELGKTAGK
Sbjct: 195 KTGALLETCVVCGGILAGATDADIERLSRYAQNIGLAFQIIDDILDITATQEELGKTAGK 254
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
DL + KATYP L G+E +K+ A EL+ +AI +L F ++ PL LAN+I +R
Sbjct: 255 DLQAQKATYPSLWGLEASKAKAQELIEEAIAQLEPF-GERSQPLIALANFITAR 307
>gi|62320250|dbj|BAD94520.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 360
Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 178/297 (59%), Positives = 234/297 (78%), Gaps = 4/297 (1%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F+ YMIRKAE V+ AL+ +V Q P+ I +A+RYSLLAGGKRVRPLLCIA+CELVGGD
Sbjct: 64 FDFKSYMIRKAESVSMALNVSVPPQDPLAIQEAVRYSLLAGGKRVRPLLCIAACELVGGD 123
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
E+ AM AACA+EMIHT SLIHDDLP +D+ + RR KP +H+VFGE A+LAGDALL+LA
Sbjct: 124 EATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKVFGEHMAVLAGDALLALAF 183
Query: 182 EHVAVNIAG-VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG---KDVSLKELEYIHV 237
EH+ V +G V+P+R++R++ E+ A+G +GLVAG+ D+ S+G DV L+ LE+IH+
Sbjct: 184 EHMTVVSSGLVAPERMIRSVTELAKAIGTKGLVAGQVSDLCSQGLNPYDVGLERLEFIHL 243
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
HKTA LLEAA V GA+IGGG E++++R Y RCIGLLFQVVDDI+DVT+S+EELGKTAG
Sbjct: 244 HKTAALLEAAAVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDIIDVTESTEELGKTAG 303
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
KD+ + K TYP+L+G+E ++ A +L +A E+L F+++K APL LA+YIA R N
Sbjct: 304 KDVKARKLTYPRLIGLERSREVAEKLRREAAEQLLGFDSNKVAPLVALASYIACRHN 360
>gi|15232010|ref|NP_189747.1| geranylgeranyl diphosphate synthase 12 [Arabidopsis thaliana]
gi|75263903|sp|Q9LHR4.1|GGPPC_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 12,
chloroplastic; Short=GGPP synthase 12; Short=GGPS12;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 12;
AltName: Full=Dimethylallyltranstransferase 12; AltName:
Full=Farnesyl diphosphate synthase 12; AltName:
Full=Farnesyltranstransferase 12; AltName:
Full=Geranyltranstransferase 12; Flags: Precursor
gi|9294084|dbj|BAB01936.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|50253560|gb|AAT71982.1| At3g32040 [Arabidopsis thaliana]
gi|332644160|gb|AEE77681.1| geranylgeranyl diphosphate synthase 12 [Arabidopsis thaliana]
Length = 360
Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 178/297 (59%), Positives = 234/297 (78%), Gaps = 4/297 (1%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F+ YMIRKAE V+ AL+ +V Q P+ I +A+RYSLLAGGKRVRPLLCIA+CELVGGD
Sbjct: 64 FDFKSYMIRKAESVSMALNVSVPPQDPLAIQEAVRYSLLAGGKRVRPLLCIAACELVGGD 123
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
E+ AM AACA+EMIHT SLIHDDLP +D+ + RR KP +H+VFGE A+LAGDALL+LA
Sbjct: 124 EATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKVFGEHMAVLAGDALLALAF 183
Query: 182 EHVAVNIAG-VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG---KDVSLKELEYIHV 237
EH+ V +G V+P+R++R++ E+ A+G +GLVAG+ D+ S+G DV L+ LE+IH+
Sbjct: 184 EHMTVVSSGLVAPERMIRSVTELAKAIGTKGLVAGQVSDLCSQGLNPYDVGLERLEFIHL 243
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
HKTA LLEAA V GA+IGGG E++++R Y RCIGLLFQVVDDI+DVT+S+EELGKTAG
Sbjct: 244 HKTAALLEAAAVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDIIDVTESTEELGKTAG 303
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
KD+ + K TYP+L+G+E ++ A +L +A E+L F+++K APL LA+YIA R N
Sbjct: 304 KDVMARKLTYPRLIGLERSREVAEKLRREAAEQLLGFDSNKVAPLVALASYIACRHN 360
>gi|409993924|ref|ZP_11277049.1| farnesyl-diphosphate synthase [Arthrospira platensis str. Paraca]
gi|291568862|dbj|BAI91134.1| geranylgeranyl pyrophosphate synthase [Arthrospira platensis
NIES-39]
gi|409935211|gb|EKN76750.1| farnesyl-diphosphate synthase [Arthrospira platensis str. Paraca]
Length = 316
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 164/308 (53%), Positives = 213/308 (69%), Gaps = 5/308 (1%)
Query: 48 QNSVFESTDIPLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVR 107
+N +D P F Y+ +K E V ALD A+ + P KI+++MRYSL+AGGKR+R
Sbjct: 13 ENMDLSGSDTP---FDLSTYLSQKKELVEAALDAAITVTYPEKIYESMRYSLMAGGKRLR 69
Query: 108 PLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGES 167
P LC+A+CEL+GG AMP ACALEMIHTMSLIHDDLP +DND+ RR K +H+V+G+
Sbjct: 70 PTLCLATCELLGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDD 129
Query: 168 TAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KD 226
AILAGD LLS A E VA GV P+RV++ I + A+G GLV G+ VDIASEG D
Sbjct: 130 IAILAGDGLLSYAFEFVATQTQGVPPERVLQVIGRLGRAVGATGLVGGQVVDIASEGLSD 189
Query: 227 VSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVT 286
VS + L +IH HKT LLEA VVCGA++ G N ++ER+ YA+ IGL FQ+VDDILD+T
Sbjct: 190 VSEETLTFIHTHKTGALLEACVVCGAILAGANETDLERLSRYAKNIGLAFQIVDDILDIT 249
Query: 287 KSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLA 346
SE+LGKTAGKDL + KATYP L G+E +++ A +L+ +A ELA F A L +A
Sbjct: 250 APSEQLGKTAGKDLEAQKATYPSLWGLEKSRAKAEQLVEEAKAELAAFGYGGKA-LAAIA 308
Query: 347 NYIASRQN 354
++I R +
Sbjct: 309 DFITYRSH 316
>gi|11994221|dbj|BAB01343.1| geranyl geranyl pyrophosphate synthase-like protein [Arabidopsis
thaliana]
Length = 306
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 169/271 (62%), Positives = 217/271 (80%), Gaps = 4/271 (1%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPF 147
P+ + +A+RYSLLAGGKRVRPLLCIA CELVGGDE+ AM AACA+EMIHT SLIHDDLP
Sbjct: 36 PLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPC 95
Query: 148 LDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAG-VSPDRVVRAIAEMCSA 206
+DN + RR KP +H+VFGE A+LAGDALL+LA EH+ V +G V+ +R++RA+ E+ A
Sbjct: 96 MDNADLRRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGLVASERMIRAVVELARA 155
Query: 207 MGVEGLVAGEFVDIASEG---KDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
+G +GLVAG+ VD++SE DV L+ LE+IH+HKTA LLEAA V GA++GGG E+E
Sbjct: 156 IGTKGLVAGQVVDLSSERLNPHDVGLERLEFIHLHKTAALLEAAAVIGAIMGGGTEEEIE 215
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++R YARCIGLLFQVVDDILDVTKS+EELGKTAGKD+ +GK TYP+L+G+E ++ A +L
Sbjct: 216 KLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGLERSREVAEKL 275
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+A E+L FE+ KAAPL LA+YI+ R +
Sbjct: 276 SREAEEQLLGFESDKAAPLVALASYISCRND 306
>gi|443477457|ref|ZP_21067303.1| Farnesyltranstransferase [Pseudanabaena biceps PCC 7429]
gi|443017422|gb|ELS31868.1| Farnesyltranstransferase [Pseudanabaena biceps PCC 7429]
Length = 307
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 156/305 (51%), Positives = 218/305 (71%), Gaps = 2/305 (0%)
Query: 51 VFESTDIPLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLL 110
T P F ++Y+ ++V ALD ++ + P KI+++MRYSL+AGGKR+RP+L
Sbjct: 4 TLSETSSPTVAFNLDKYLRDLKQEVEAALDASISVTYPEKIYESMRYSLMAGGKRLRPIL 63
Query: 111 CIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAI 170
C+A+ EL+GGD + AMP ACA+EM+HTMSLIHDDLP +DND+ RR KP +H+V+G+ AI
Sbjct: 64 CLAAHELLGGDLAAAMPTACAMEMVHTMSLIHDDLPAMDNDDFRRGKPTNHKVYGDDIAI 123
Query: 171 LAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSL 229
LAGDALL+ A E +AV GV +R+++AIA + A+ GLV G+ VD+ EGK DV+
Sbjct: 124 LAGDALLAYAFEFIAVQTKGVPAERILKAIAHLGHAVAATGLVGGQVVDLECEGKSDVTA 183
Query: 230 KELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSS 289
+ L +IH+HKTA LLE+ V+CGA++ G N +++R+ YA IGL FQ++DDILD+T +S
Sbjct: 184 EILTFIHIHKTAALLESCVICGALLAGANDTDIKRLSTYANNIGLAFQIIDDILDITATS 243
Query: 290 EELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYI 349
E+LGKTAGKDLA+ K TYP L GIE ++ A EL+ QA +L + A PL LA+YI
Sbjct: 244 EQLGKTAGKDLAAQKVTYPSLWGIEASQLKAQELVEQAKAQLVSY-GDAALPLMALADYI 302
Query: 350 ASRQN 354
+R+N
Sbjct: 303 TARKN 307
>gi|113953464|ref|YP_730204.1| geranylgeranyl diphosphate synthase [Synechococcus sp. CC9311]
gi|113880815|gb|ABI45773.1| geranylgeranyl diphosphate synthase [Synechococcus sp. CC9311]
Length = 312
Score = 320 bits (820), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 162/295 (54%), Positives = 211/295 (71%), Gaps = 1/295 (0%)
Query: 59 LPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELV 118
L TF F Y+ ++V ALD ++ + P + AMRYSLLAGGKR+RP+LC+A+CELV
Sbjct: 18 LSTFDFANYLKLSRDRVEIALDASMGPERPESLRDAMRYSLLAGGKRLRPILCLAACELV 77
Query: 119 GGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLS 178
GG AMP A ALEMIHTMSLIHDDLP +DND+ RR +P +H+V+G++ AILAGDA+LS
Sbjct: 78 GGSSELAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAMAILAGDAMLS 137
Query: 179 LALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
A E VAV A V DR++R + E+ G GLV G+ VD+ SEG+ V L+ LEYIH+H
Sbjct: 138 RAFEMVAVRSANVPADRLLRVVGELALVSGAPGLVGGQVVDLESEGQAVDLETLEYIHLH 197
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KTA LL A VV GA+IGG N +++ +R YA IGL FQ++DDILDVT SSE LGKTAGK
Sbjct: 198 KTAALLRACVVTGALIGGANDDQLQAMRTYANGIGLAFQIIDDILDVTASSEVLGKTAGK 257
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
DL + K TYPKL+G++ ++ A +L+ ++ L + KAAPL LA+Y+ASR
Sbjct: 258 DLLADKTTYPKLLGLDASREKALQLVRESKAALEPWR-DKAAPLLALADYVASRD 311
>gi|428206430|ref|YP_007090783.1| farnesyl-diphosphate synthase [Chroococcidiopsis thermalis PCC
7203]
gi|428008351|gb|AFY86914.1| farnesyl-diphosphate synthase [Chroococcidiopsis thermalis PCC
7203]
Length = 308
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 157/294 (53%), Positives = 211/294 (71%), Gaps = 2/294 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F Y+ ++ +V AL+ ++++ P KI++AMRYSLLAGGKR+RP+LC+A+CE+ GG
Sbjct: 16 FDLSAYLKQRQVEVEAALESSIIVTYPEKIYEAMRYSLLAGGKRLRPILCLATCEMAGGT 75
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
AMP ACALEMIHTMSLIHDDLP +DND+ RR + +H+V+G+ AILAGD LL+ A
Sbjct: 76 VEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGRLTNHKVYGDDIAILAGDGLLAYAF 135
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKT 240
E++A V P+RV+RAIA++ A+G GLV G+ VD+ SEGK DV+ L +IH HKT
Sbjct: 136 EYIATQTKNVPPERVLRAIAQLGHAVGAAGLVGGQVVDLESEGKSDVTADTLHFIHTHKT 195
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
A LLEA VV G V+ G +++R+ YA+ IGL FQ++DDILDVT ++EELGKTAGKDL
Sbjct: 196 AALLEACVVSGGVLAGLEESDLQRLSRYAQNIGLAFQIIDDILDVTATAEELGKTAGKDL 255
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K TYP L GIE ++ A L+ A EEL F + KA PL LA++I +R+N
Sbjct: 256 QAQKVTYPSLWGIEESRRQAQALIATAKEELTPF-SEKAQPLIALADFITNRKN 308
>gi|194477224|ref|YP_002049403.1| geranylgeranyl pyrophosphate synthase [Paulinella chromatophora]
gi|171192231|gb|ACB43193.1| geranylgeranyl pyrophosphate synthase [Paulinella chromatophora]
Length = 300
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 159/293 (54%), Positives = 212/293 (72%), Gaps = 1/293 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F Y+ E V ALD ++ + P + +AMRYSLLAGGKR+RP+LC+A+CEL GG+
Sbjct: 9 FDFAAYLRAARESVELALDGSLGTERPTSLSEAMRYSLLAGGKRLRPILCLAACELAGGN 68
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
+ AMP A ALEMIHTMSLIHDDLP +DND+ RR +P +H+V+GE+TAILAGDALL+ A
Sbjct: 69 VAAAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGEATAILAGDALLTRAF 128
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
E VA+ GVSP+ +++ I E+ A G GLV G+ VD+ SEGK+V+L LEYIH+HKT
Sbjct: 129 EIVALRSPGVSPECILKVIGELSLAAGAPGLVGGQMVDLESEGKEVNLDTLEYIHLHKTG 188
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
LL A V+CG +IG + ++ +RNYAR IGL FQ++DDILDVT SS+ LGKTAGKDL
Sbjct: 189 ALLSACVICGGLIGDASDELLQALRNYARGIGLAFQIIDDILDVTASSDVLGKTAGKDLV 248
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K TYPKL+G++ ++ A +L+ +A + L + +AAPL LA+YI R
Sbjct: 249 ADKTTYPKLLGLKASRERAEQLVAEAKQGLDPWR-DRAAPLLALADYITGRDR 300
>gi|427724764|ref|YP_007072041.1| farnesyl-diphosphate synthase [Leptolyngbya sp. PCC 7376]
gi|427356484|gb|AFY39207.1| farnesyl-diphosphate synthase [Leptolyngbya sp. PCC 7376]
Length = 301
Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 157/294 (53%), Positives = 208/294 (70%), Gaps = 3/294 (1%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F E Y+ K V ALD+++V PV +++AMRYSLLAGGKR+RP+LC+A+C ++GG
Sbjct: 10 FSLERYLKEKKAIVETALDQSIVTAEPVTVYEAMRYSLLAGGKRLRPILCLAACNMLGGT 69
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
AM ACALEMIHTMSLIHDDLP +DND+ RR KP +H+V+GE AILAGD LLS A
Sbjct: 70 TEMAMNTACALEMIHTMSLIHDDLPSMDNDDLRRGKPTNHKVYGEDIAILAGDGLLSYAF 129
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKT 240
E+VA GV DR+++ + + A+G EGLV G+ VD+ SEGK DVS++ L +IH HKT
Sbjct: 130 EYVA-RTQGVPADRLLQVVIRLGQAVGAEGLVGGQVVDLQSEGKTDVSIETLNFIHTHKT 188
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
LLE V GA++ G ++++++ YA+ IGL FQ++DDILD+T + EELGKTAGKDL
Sbjct: 189 GALLEVCVTSGAILAGAENAKIQKLQKYAQNIGLTFQIIDDILDITATQEELGKTAGKDL 248
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K TYP L G+E ++S A L +AI L + AS AAPL LA YI +R+N
Sbjct: 249 DAQKVTYPSLWGLEKSRSEAQRLTDEAIASLEDYGAS-AAPLKALAEYIINRKN 301
>gi|411120370|ref|ZP_11392744.1| geranylgeranyl pyrophosphate synthase [Oscillatoriales
cyanobacterium JSC-12]
gi|410709751|gb|EKQ67264.1| geranylgeranyl pyrophosphate synthase [Oscillatoriales
cyanobacterium JSC-12]
Length = 308
Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 158/294 (53%), Positives = 210/294 (71%), Gaps = 2/294 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F Y+ + QV ALD ++ + P KI++AMRYSL+AGGKR+RP+LC+A+CEL GG
Sbjct: 16 FDLATYLAERQAQVEAALDRSLPIIYPEKIYEAMRYSLMAGGKRLRPILCLATCELTGGT 75
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
AMP ACALEMIHTMSLIHDDLP +DND+ RR K +H+VFGE AILAGD LL+ A
Sbjct: 76 VEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDVAILAGDGLLAYAF 135
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKT 240
EHVA+ GV+P+R+++ +A + A+G GLV G+ VD+ EGK DVSL+ L +IH HKT
Sbjct: 136 EHVAIETKGVAPERLLKVVAMLGRAVGAAGLVGGQVVDLECEGKSDVSLETLNFIHNHKT 195
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
A LLEA+V GAV+ G + +V+R+ YA+ IGL FQ+VDDILD+T + EELGKTAGKDL
Sbjct: 196 AALLEASVTSGAVLSGASDEDVQRLLRYAQNIGLAFQIVDDILDITATQEELGKTAGKDL 255
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ KATYP + G+E ++ A +L+ A EL F KA L +A++I +R +
Sbjct: 256 TAQKATYPSIWGLEESRRQADKLISDAKSELGLF-GEKAIALVAIADFITARTH 308
>gi|126030919|pdb|2J1O|A Chain A, Geranylgeranyl Diphosphate Synthase From Sinapis Alba
Length = 268
Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 169/289 (58%), Positives = 209/289 (72%), Gaps = 37/289 (12%)
Query: 67 YMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAM 126
Y+IRKA+ VNKALD AV L+ P+KIH+AMRYSLLAGGKRVRP+LCIA+CELVGG+ES AM
Sbjct: 16 YIIRKADSVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESLAM 75
Query: 127 PAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAV 186
PAACA+EMIHTMSLIHDD V+GE A+LAGDALLS A EH+A
Sbjct: 76 PAACAVEMIHTMSLIHDD------------------VYGEDVAVLAGDALLSFAFEHLAS 117
Query: 187 NIAG-VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLE 245
+ VSP RVVRA+ E+ A+G EGLVAG+ VDI+ +V L+ L++IH+HKTA LLE
Sbjct: 118 ATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDIS----NVGLEHLKFIHLHKTAALLE 173
Query: 246 AAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKA 305
A+ V G +IGGG+ E+ER+R +ARCIGLLFQVVDDILDVT + K
Sbjct: 174 ASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVTIAD--------------KL 219
Query: 306 TYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
TYPKLMG+E ++ FA +L +A ++L F++ K APL LANYIA+RQN
Sbjct: 220 TYPKLMGLEKSREFAEKLNTEARDQLLGFDSDKVAPLLALANYIANRQN 268
>gi|209526715|ref|ZP_03275238.1| Polyprenyl synthetase [Arthrospira maxima CS-328]
gi|376002372|ref|ZP_09780207.1| geranyltranstransferase [Arthrospira sp. PCC 8005]
gi|423067929|ref|ZP_17056719.1| geranylgeranyl diphosphate synthase [Arthrospira platensis C1]
gi|209492847|gb|EDZ93179.1| Polyprenyl synthetase [Arthrospira maxima CS-328]
gi|375329252|emb|CCE15960.1| geranyltranstransferase [Arthrospira sp. PCC 8005]
gi|406710557|gb|EKD05765.1| geranylgeranyl diphosphate synthase [Arthrospira platensis C1]
Length = 316
Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 162/307 (52%), Positives = 214/307 (69%), Gaps = 4/307 (1%)
Query: 51 VFESTDIPLPTFPFE--EYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRP 108
V E+ D+ PF+ Y+ +K E V ALD A+ + P KI+++MRYSL+AGGKR+RP
Sbjct: 11 VTENMDLSGSDRPFDLSTYLSQKKELVEAALDAAIAVTYPEKIYESMRYSLMAGGKRLRP 70
Query: 109 LLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGEST 168
+LC+A+CEL+GG AMP ACALEMIHTMSLIHDDLP +DND+ RR K +H+V+GE
Sbjct: 71 ILCLATCELLGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDI 130
Query: 169 AILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDV 227
AILAGD LLS A E VA GV P+RV++ I + A+G GLV G+ VD+ASEG D+
Sbjct: 131 AILAGDGLLSYAFEFVATQTQGVPPERVLQVIGRLGRAVGATGLVGGQVVDLASEGLSDI 190
Query: 228 SLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTK 287
S + L +IH HKT LLEA VVCGA++ G N ++ER+ YA+ IGL FQ+VDDILD+T
Sbjct: 191 SEETLTFIHTHKTGALLEACVVCGAILAGANETDLERLSRYAKNIGLAFQIVDDILDITV 250
Query: 288 SSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLAN 347
S ELGKTAGKDL + KATYP L G+E +++ A +L+ +A EL F + L +A+
Sbjct: 251 PSSELGKTAGKDLEAQKATYPSLWGLEKSRAKAQQLVEEAKAELQAF-GNGGCALAAIAD 309
Query: 348 YIASRQN 354
+I R +
Sbjct: 310 FITYRSH 316
>gi|428311367|ref|YP_007122344.1| geranylgeranyl pyrophosphate synthase [Microcoleus sp. PCC 7113]
gi|428252979|gb|AFZ18938.1| geranylgeranyl pyrophosphate synthase [Microcoleus sp. PCC 7113]
Length = 309
Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 159/295 (53%), Positives = 207/295 (70%), Gaps = 2/295 (0%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
TF Y+ ++ QV ALD ++ L P KI++AMRYSLLAGGKR+RP+LC+A+CELVGG
Sbjct: 16 TFDLSTYLKQRQAQVEAALDRSLPLTYPEKIYEAMRYSLLAGGKRLRPILCLATCELVGG 75
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
AMP ACALEMIHTMSLIHDDLP +DND+ RR K +H+V+G+ AILAGD LL+ A
Sbjct: 76 TLEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDIAILAGDGLLAYA 135
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHK 239
E+VA V +V++ +A + A+G GLV G+ VD+ SEG D+ + L +IH HK
Sbjct: 136 FEYVATQTQNVPAHQVLQVVARLGRAVGAAGLVGGQVVDLESEGNSDIQEETLTFIHTHK 195
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T LLEA VVCG ++GG E+ER+ YA+ IGL FQ+VDDILD+T + EELGKTAGKD
Sbjct: 196 TGALLEACVVCGGILGGVTDEEIERLSRYAKNIGLAFQIVDDILDITATQEELGKTAGKD 255
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L + KATYP L GIE +K+ A +L+ A EL F KA PL +A++I +R +
Sbjct: 256 LLAQKATYPSLWGIEASKTKAQQLIDAAKAELELF-GEKAQPLLAIADFITTRTH 309
>gi|434399896|ref|YP_007133900.1| Farnesyltranstransferase [Stanieria cyanosphaera PCC 7437]
gi|428270993|gb|AFZ36934.1| Farnesyltranstransferase [Stanieria cyanosphaera PCC 7437]
Length = 320
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 156/309 (50%), Positives = 215/309 (69%), Gaps = 3/309 (0%)
Query: 48 QNSVFESTDI-PLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRV 106
Q VF+ + TF Y+ ++ V +ALD ++ + P KI++AMRYSLLAGGKR+
Sbjct: 13 QTPVFDEVEADSRSTFDLNSYLKQQKILVEQALDSSLPINQPAKIYEAMRYSLLAGGKRL 72
Query: 107 RPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGE 166
RP+LC+A+CEL GG A+P ACALEMIHTMSLIHDDLP +DND+ RR K +H+V+GE
Sbjct: 73 RPILCLATCELTGGSNEMAIPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGE 132
Query: 167 STAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK- 225
AILAGD LL+ A E+VA V +R+V+ IA + +G EGLV G+ +D+ SEGK
Sbjct: 133 DIAILAGDGLLAYAFEYVATQTKNVPAERIVKVIARLGRTVGAEGLVGGQVLDLESEGKS 192
Query: 226 DVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDV 285
D+S + L +IH HKT LLEA+VV GA++ G + ++ R+ YA+ IGL FQ++DDILD+
Sbjct: 193 DISAETLTFIHTHKTGALLEASVVSGAILSGASEEDLARLSKYAQNIGLAFQIIDDILDI 252
Query: 286 TKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFL 345
T + E+LGKTAGKDL + KATYP L GIE ++ A +L+ +AI +L + +KA PL +
Sbjct: 253 TATDEQLGKTAGKDLQAQKATYPSLWGIEKSQHQAEKLINEAIAQLKPY-GNKAKPLEAI 311
Query: 346 ANYIASRQN 354
A +I +R N
Sbjct: 312 ARFIVTRNN 320
>gi|255080134|ref|XP_002503647.1| geranyl pyrophosphate synthase [Micromonas sp. RCC299]
gi|226518914|gb|ACO64905.1| geranyl pyrophosphate synthase [Micromonas sp. RCC299]
Length = 349
Score = 317 bits (812), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 160/297 (53%), Positives = 209/297 (70%), Gaps = 4/297 (1%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F Y+ K + +AL ++V P ++H++MRYSLLAGGKR+RP LCIA+CEL+GG
Sbjct: 53 LDFAAYIAEKNAAIEQALSDSVPEMYPERLHESMRYSLLAGGKRIRPCLCIAACELMGGT 112
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
AMP ACALEMIHTMSLIHDDLP +DND+ RR KP +H+V+GE AILAGDALLS A
Sbjct: 113 MDVAMPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEEMAILAGDALLSHAF 172
Query: 182 EHVAVNIAGVSP-DRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK---DVSLKELEYIHV 237
E++ P +R +R I ++ +G EGLV G+ VDI SEG +V+++ L+YIH
Sbjct: 173 EYIGRETPKSVPAERTLRVIVDVGKCVGSEGLVGGQVVDIMSEGAEAGEVTVETLQYIHA 232
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
HKT LLE +V GA++ G +VER+ YA+ IGL FQVVDDILD T++SE+LGKTAG
Sbjct: 233 HKTGALLEVSVTAGAILAGAKEEDVERLGKYAQLIGLAFQVVDDILDCTQTSEQLGKTAG 292
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
KD A GKATYP L+G+E +K A +L+ A + L ++ KAAPL LA+YI +RQN
Sbjct: 293 KDEAVGKATYPSLVGLEESKKIADKLIADAKDLLKDYDQEKAAPLIGLADYIKNRQN 349
>gi|148241850|ref|YP_001227007.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RCC307]
gi|147850160|emb|CAK27654.1| Geranylgeranyl pyrophosphate synthase [Synechococcus sp. RCC307]
Length = 300
Score = 317 bits (812), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 160/293 (54%), Positives = 210/293 (71%), Gaps = 1/293 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F Y+ +V +ALD ++ + P + +AMRYSLLAGGKR+RP+LC+ASCEL GGD
Sbjct: 9 FDFSHYLEAGRLKVEQALDSSLGPERPESLREAMRYSLLAGGKRLRPILCLASCELAGGD 68
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
S A+P A ALEMIHTMSLIHDDLP +DND+ RR +P +H+V+G++TAILAGDALL+ A
Sbjct: 69 ASLALPTATALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDATAILAGDALLTRAF 128
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
E VA+ V +R+++ I E+ A G GLV G+ VD+ASEG +V L LEYIH+HKT
Sbjct: 129 EMVALRSPDVPAERLLKVIGELSLAAGAPGLVGGQIVDLASEGVEVDLDTLEYIHLHKTG 188
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
LL+A+V+ GA+I G + +E +R Y+R IGL FQ++DDILDVT SSE LGKTAGKDL
Sbjct: 189 ALLQASVLSGALIAGADDTLLEALRTYSRAIGLAFQIIDDILDVTASSEVLGKTAGKDLT 248
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K TYPKL+G+E +K+ A L+ +A L + + KA PL LA YI SR
Sbjct: 249 ADKTTYPKLLGLEESKARAESLVKEACGVLNPW-SDKAQPLLALAGYITSRDR 300
>gi|303271183|ref|XP_003054953.1| geranyl pyrophosphate synthase [Micromonas pusilla CCMP1545]
gi|226462927|gb|EEH60205.1| geranyl pyrophosphate synthase [Micromonas pusilla CCMP1545]
Length = 343
Score = 317 bits (811), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 167/334 (50%), Positives = 223/334 (66%), Gaps = 9/334 (2%)
Query: 30 APIFRFKLFSKKI-----KARHAQNSVFESTDIPLPTFPFEEYMIRKAEQVNKALDEAVV 84
A I R KK+ K +H + + + + F Y+ K + + +AL ++V
Sbjct: 10 AIIARLNPRQKKVNNLRQKTQHLRAAAAPAAAVEASELDFGNYIADKNKAIEQALSDSVP 69
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
P ++H++MRYSLLAGGKR+RP LCIA+CEL+GG AMP ACALEMIHTMSLIHDD
Sbjct: 70 EMYPERLHESMRYSLLAGGKRIRPCLCIAACELMGGTMEVAMPTACALEMIHTMSLIHDD 129
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSP-DRVVRAIAEM 203
LP +DND+ RR KP +H+V+GE AILAGDALLS A E++ P +R +R + ++
Sbjct: 130 LPSMDNDDFRRGKPTNHKVYGEEMAILAGDALLSHAFEYIGRETPKSVPAERTLRVLVDV 189
Query: 204 CSAMGVEGLVAGEFVDIASEGKD---VSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAI 260
+G EGLV G+ VDI SEG D V+L+ L+YIH HKT LLE +V GA++ G
Sbjct: 190 GKCVGSEGLVGGQVVDIMSEGADADEVTLETLKYIHAHKTGALLEVSVTSGAILAGAKEE 249
Query: 261 EVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFA 320
+VER+ YA+ IGL FQVVDDILD T++SE+LGKTAGKD A GKATYP L+G+E +K A
Sbjct: 250 DVERLGKYAQLIGLAFQVVDDILDCTQTSEQLGKTAGKDEAVGKATYPSLVGLEESKKIA 309
Query: 321 GELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+L+ +A E L ++ AAPL LA++I +RQN
Sbjct: 310 DDLITEAKELLRDYDPKLAAPLLGLADFIKNRQN 343
>gi|115473007|ref|NP_001060102.1| Os07g0580900 [Oryza sativa Japonica Group]
gi|33146837|dbj|BAC79826.1| putative geranylgeranyl diphosphate synthase [Oryza sativa Japonica
Group]
gi|50509220|dbj|BAD30490.1| putative geranylgeranyl diphosphate synthase [Oryza sativa Japonica
Group]
gi|113611638|dbj|BAF22016.1| Os07g0580900 [Oryza sativa Japonica Group]
gi|215767933|dbj|BAH00162.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768308|dbj|BAH00537.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 316 bits (810), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 183/303 (60%), Positives = 227/303 (74%), Gaps = 10/303 (3%)
Query: 62 FPFEEYMIRKAEQVNKALDEAV-VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
F F YM KA VN+ALD ++ +PP +H+AMRY+LLAGGKRVRP LC+A+C +VGG
Sbjct: 64 FDFNAYMGEKAAAVNRALDASIPADEPPAALHEAMRYALLAGGKRVRPALCLAACAVVGG 123
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
E+WAMPAA A+EM+HTMSL+HDDLP +D+D+ RR KP H V+GE A+L GDALLSL+
Sbjct: 124 REAWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLTGDALLSLS 183
Query: 181 LEHVAV------NI-AGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG--KDVSLKE 231
H+A +I A P RVVRAI E+ +G EGLVAG+ VD+ G + V L+
Sbjct: 184 FHHMARFDSYPPDIDADKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGSTETVPLER 243
Query: 232 LEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEE 291
LEYIH+HKTA LLEA+VV GA++GGG+ ++E +R YAR IGLLFQVVDDILDVTKSSEE
Sbjct: 244 LEYIHLHKTAALLEASVVIGAILGGGSDEQIESLRMYARSIGLLFQVVDDILDVTKSSEE 303
Query: 292 LGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIAS 351
LGKTAGKDLAS K TYPKL+G+E ++ FA +LL A E+L+ F+ AAPL LANYIA
Sbjct: 304 LGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDAREQLSGFDQETAAPLLHLANYIAY 363
Query: 352 RQN 354
RQN
Sbjct: 364 RQN 366
>gi|125558937|gb|EAZ04473.1| hypothetical protein OsI_26621 [Oryza sativa Indica Group]
Length = 366
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 183/303 (60%), Positives = 227/303 (74%), Gaps = 10/303 (3%)
Query: 62 FPFEEYMIRKAEQVNKALDEAV-VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
F F YM KA VN+ALD ++ +PP +H+AMRY+LLAGGKRVRP LC+A+C +VGG
Sbjct: 64 FDFNAYMGEKAAAVNRALDASIPADEPPAALHEAMRYALLAGGKRVRPALCLAACAVVGG 123
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
E+WAMPAA A+EM+HTMSL+HDDLP +D+D+ RR KP H V+GE A+L GDALLSL+
Sbjct: 124 REAWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLTGDALLSLS 183
Query: 181 LEHVAV------NI-AGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG--KDVSLKE 231
H+A +I A P RVVRAI E+ +G EGLVAG+ VD+ G + V L+
Sbjct: 184 FHHMARFDSYPPDIDADKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGSTETVPLER 243
Query: 232 LEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEE 291
LEYIH+HKTA LLEA+VV GA++GGG+ ++E +R YAR IGLLFQVVDDILDVTKSSEE
Sbjct: 244 LEYIHLHKTAALLEASVVIGAILGGGSDEQIESLRMYARSIGLLFQVVDDILDVTKSSEE 303
Query: 292 LGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIAS 351
LGKTAGKDLAS K TYPKL+G+E ++ FA +LL A E+L+ F+ AAPL LANYIA
Sbjct: 304 LGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDAREQLSGFDQETAAPLLHLANYIAY 363
Query: 352 RQN 354
RQN
Sbjct: 364 RQN 366
>gi|359458569|ref|ZP_09247132.1| geranylgeranyl diphosphate synthase [Acaryochloris sp. CCMEE 5410]
Length = 316
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 159/305 (52%), Positives = 216/305 (70%), Gaps = 5/305 (1%)
Query: 54 STDIPLPT---FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLL 110
+ D+ PT F +Y+ ++ E V ALD ++ + P KI++AMRYSL+AGGKR+RP+L
Sbjct: 13 TQDLSAPTPSNFNLVDYLSQRRELVEAALDASIPVVYPEKIYEAMRYSLMAGGKRLRPIL 72
Query: 111 CIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAI 170
C+A+CEL GG AMP ACALEMIHTMSLIHDDLP +DND+ RR KP +H+ +GE AI
Sbjct: 73 CLAACELAGGTIEMAMPTACALEMIHTMSLIHDDLPAMDNDDFRRGKPTNHKKYGEDIAI 132
Query: 171 LAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSL 229
LAGD LL+ A EHVA+ V P++V++ +A + A+ GLV G+ VD+ SEG +DV+L
Sbjct: 133 LAGDGLLAYAYEHVAIQTQQVPPEQVLKVVARLGHAVAATGLVGGQVVDLESEGAEDVTL 192
Query: 230 KELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSS 289
L +IH HKT LLEA+V+ GA + G N ++R +AR IGL FQ++DD+LDVT +S
Sbjct: 193 STLNFIHAHKTGALLEASVLSGAELAGANQDLLDRCSKFARNIGLAFQIIDDVLDVTATS 252
Query: 290 EELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYI 349
E+LGKTAGKD+A+ KATYP L GI +K A L+ +A ELA + ++APL LA++I
Sbjct: 253 EKLGKTAGKDVAAQKATYPSLWGIPESKRQAQHLIEEAKAELAVY-GEQSAPLQALADFI 311
Query: 350 ASRQN 354
SRQ+
Sbjct: 312 TSRQS 316
>gi|116073079|ref|ZP_01470341.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9916]
gi|116068384|gb|EAU74136.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9916]
Length = 317
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 156/297 (52%), Positives = 213/297 (71%), Gaps = 5/297 (1%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F+ Y+ + + V ALD+++ + P + +AMRYSLLAGGKR+RP+LC+A+CEL GGD
Sbjct: 20 FDFKAYLGSQKQLVEAALDDSLGPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGD 79
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
+ AMP A ALEMIHTMSLIHDDLP +DND+ RR +P +H+V+G++ AILAGDALL+ A
Sbjct: 80 PALAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAGDALLTRAF 139
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
E V++ GV +R+++ +AE+ G GLV G+ VD+ EGKDV L LEYIH+HKT
Sbjct: 140 EMVSLRSPGVPAERLLKVVAELSLVAGAPGLVGGQVVDLECEGKDVDLDTLEYIHLHKTG 199
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
LL+A V+ GA+IGG + +++ +R YAR IGL FQ+VDDILDVT SS+ LGKTAGKDL
Sbjct: 200 ALLKACVITGALIGGADEAQLDSLRTYARGIGLAFQIVDDILDVTASSDVLGKTAGKDLI 259
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFE-----ASKAAPLYFLANYIASRQ 353
+ K TYPKL+G+E ++ A L+ +A L F+ + +AAPL LA+Y+ R
Sbjct: 260 ADKTTYPKLLGLEESRLRAKGLIQEAKTSLDAFKPVGGGSVQAAPLLALADYVIGRD 316
>gi|428772609|ref|YP_007164397.1| farnesyl-diphosphate synthase [Cyanobacterium stanieri PCC 7202]
gi|428686888|gb|AFZ46748.1| farnesyl-diphosphate synthase [Cyanobacterium stanieri PCC 7202]
Length = 294
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 156/294 (53%), Positives = 212/294 (72%), Gaps = 2/294 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F + Y+ K + V K+LDE++ + P KI+++MRYSLLAGGKR+RP+LC+A+CEL+GG
Sbjct: 2 FDLQSYLKEKQKLVEKSLDESLPMGKPEKIYESMRYSLLAGGKRLRPILCLATCELMGGT 61
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
+ A+P+ACALEMIHTMSLIHDDLP +DND+ RR K +H+V+G+ AILAGD LL+ A
Sbjct: 62 DEMALPSACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDIAILAGDGLLTYAF 121
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKT 240
E+VA GV + V+ I + A+G EGLV G+ +D+ EGK DV+ + L +IH+HKT
Sbjct: 122 EYVARETKGVPAENVLEVIKILTKAVGAEGLVGGQVMDLECEGKTDVTAEMLSFIHIHKT 181
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
LLEA V GAV+ G ++ R+ YA+ IGL FQ++DDILDVT ++EELGKTAGKDL
Sbjct: 182 GALLEACVTSGAVLAGATQEDLSRLSIYAKNIGLAFQIIDDILDVTATTEELGKTAGKDL 241
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
++ KATYPKL G+E +K+ A EL+ AI +L + KA L LA +I SR+N
Sbjct: 242 SADKATYPKLWGLEESKAKADELIESAIAQLEVY-GEKAQSLKALAEFIVSRKN 294
>gi|414076496|ref|YP_006995814.1| geranyltranstransferase [Anabaena sp. 90]
gi|413969912|gb|AFW94001.1| geranyltranstransferase [Anabaena sp. 90]
Length = 312
Score = 315 bits (808), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 156/296 (52%), Positives = 211/296 (71%), Gaps = 3/296 (1%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
+F Y+ ++ + +ALD ++ + P KI++AMRYSLLAGGKRVRP+LC+A+ +++GG
Sbjct: 18 SFNLATYLKQRQQLCEQALDNSITVVYPEKIYEAMRYSLLAGGKRVRPILCLATADMIGG 77
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
AM ACA+EMIHTMSLIHDDLP +DND+ RR K +H+V+GE AILAGD LL+LA
Sbjct: 78 TIEMAMATACAVEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAGDGLLALA 137
Query: 181 LEHVAVNI-AGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVH 238
EHVA V DRV++ I + A+G GLV G+ VD+ SEGK D+SL+ L +IH H
Sbjct: 138 FEHVAAQTPTNVPRDRVLQVIIRLGKALGAAGLVGGQVVDLESEGKSDISLETLNFIHNH 197
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KTA LLEA VVCG +I G +A +V+++ Y++ IGL FQ++DDILD+T + E+LGKTAGK
Sbjct: 198 KTAALLEACVVCGGIIAGASAEDVQKLTRYSQNIGLAFQIIDDILDITATQEQLGKTAGK 257
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
DL + K TYP L GIE +++ A L+ QA ELA + KA PL LA++I +R N
Sbjct: 258 DLTAQKVTYPSLWGIEESRAKAQHLVAQACAELASY-GEKAIPLQALAHFIINRNN 312
>gi|428203147|ref|YP_007081736.1| geranylgeranyl pyrophosphate synthase [Pleurocapsa sp. PCC 7327]
gi|427980579|gb|AFY78179.1| geranylgeranyl pyrophosphate synthase [Pleurocapsa sp. PCC 7327]
Length = 309
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 155/294 (52%), Positives = 206/294 (70%), Gaps = 2/294 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F Y+ K + V AL+ ++ + P KI++AMRYSLLAGGKR+RP+LC+A+CEL GG
Sbjct: 17 FDLASYLEEKKQLVEAALERSLSIGKPEKIYEAMRYSLLAGGKRLRPILCLATCELTGGT 76
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
AMP ACALEMIHTMSLIHDDLP +DND+ RR K +H+VFGE AILAGD LL+ A
Sbjct: 77 TEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYAF 136
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKT 240
E+VA V P R++ IA + +G GLV G+ +D+ SEGK D+S+ L +IH HKT
Sbjct: 137 EYVAAQTQNVPPQRILDVIARLGRTVGAAGLVGGQVLDLESEGKSDISVDTLTFIHTHKT 196
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
LLE +VV GA++ G + E++R+ YA+ IGL FQ+VDDILD+T + EELGKTAGKDL
Sbjct: 197 GALLETSVVSGAMLAGASDDEIQRLSKYAQDIGLAFQIVDDILDITATQEELGKTAGKDL 256
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ KATYP L G+E ++ A +L+ AI ELA + A PL +A+YI +R++
Sbjct: 257 QAQKATYPSLWGLEESRKQAQQLVDAAIAELASY-GEGAEPLRAIASYIVTRKH 309
>gi|352093628|ref|ZP_08954799.1| Polyprenyl synthetase [Synechococcus sp. WH 8016]
gi|351679968|gb|EHA63100.1| Polyprenyl synthetase [Synechococcus sp. WH 8016]
Length = 312
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 163/305 (53%), Positives = 216/305 (70%), Gaps = 2/305 (0%)
Query: 49 NSVFESTDIPLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRP 108
SV S ++P +F F Y+ ++V ALD ++ + P + AMRYSLLAGGKR+RP
Sbjct: 9 ESVPSSGELP-SSFDFAAYLKLSRDRVEIALDASMGPERPESLRDAMRYSLLAGGKRLRP 67
Query: 109 LLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGEST 168
+LC+A+CELVGG AMP A ALEMIHTMSLIHDDLP +DND+ RR +P +H+V+G++
Sbjct: 68 ILCLAACELVGGSPELAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAM 127
Query: 169 AILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVS 228
AILAGDA+LS A E VAV A V +R++R + E+ G GLV G+ VD+ SEG+ V
Sbjct: 128 AILAGDAMLSRAFEMVAVRSANVPAERLLRVVGELALVSGAPGLVGGQVVDLESEGQAVD 187
Query: 229 LKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKS 288
L+ LEYIH+HKTA LL A VV GA+IGG + +++ +R YA IGL FQ++DDILDVT S
Sbjct: 188 LETLEYIHLHKTAALLRACVVTGALIGGASDQQLQAMRTYANGIGLAFQIIDDILDVTAS 247
Query: 289 SEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANY 348
SE LGKTAGKDL + K TYPKL+G+E ++ A +L+ ++ L + KAAPL LA+Y
Sbjct: 248 SEVLGKTAGKDLLADKTTYPKLLGLEASREKALQLVRESKAALDPWR-DKAAPLLALADY 306
Query: 349 IASRQ 353
+ASR
Sbjct: 307 VASRD 311
>gi|317970425|ref|ZP_07971815.1| polyprenyl synthetase [Synechococcus sp. CB0205]
Length = 312
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 157/292 (53%), Positives = 208/292 (71%), Gaps = 1/292 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F Y+ +QV +ALD ++ + P + +AMRYSLLAGGKR+RP+LC+A+CEL GGD
Sbjct: 19 FDFAAYLESSRQQVEQALDGSLGPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGD 78
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
+ AMP A ALEMIHTMSLIHDDLP +DND+ RR P +H+V+GE+ AILAGDALL+ A
Sbjct: 79 AALAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGMPTNHKVYGEANAILAGDALLTRAF 138
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
E VA+ GV +++++ + E+ A G GLV G+ VD+ EGKDV L+ LEYIH+HKT
Sbjct: 139 EMVALRSPGVPAEQLIKVVGELSLASGAPGLVGGQVVDLECEGKDVDLETLEYIHLHKTG 198
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
LL + V+ GA+I G + + + YAR IGL FQ++DDILDVT SSE LGKTAGKDL
Sbjct: 199 ALLRSCVLTGALIAGASEALLAALTTYARGIGLAFQIIDDILDVTASSEVLGKTAGKDLT 258
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEAS-KAAPLYFLANYIASR 352
+ K TYPKL+G+E ++ A L+ +A + L F ++ AAPL LA+YI SR
Sbjct: 259 ADKTTYPKLLGLEESRQRADALVAEAKQALEPFNSNGSAAPLLALADYITSR 310
>gi|124022642|ref|YP_001016949.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9303]
gi|123962928|gb|ABM77684.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9303]
Length = 306
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 155/293 (52%), Positives = 213/293 (72%), Gaps = 1/293 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F Y+ V +ALD+++ + P ++ +AMRYSLLAGGKR+RP+LCIA+CEL GG+
Sbjct: 15 FDFPAYLAAAKASVEEALDDSLGPERPEQLREAMRYSLLAGGKRLRPILCIAACELAGGE 74
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
+ A+P A ALEMIHTMSLIHDDLP +DND+ RR +P +H+V+G++ AILAGDALL+ +
Sbjct: 75 PTQALPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAGDALLTRSF 134
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
E VA+ GV+P+R+++ + E+ G GLV G+ VD+ EGK+V L+ LE+IH+HKT
Sbjct: 135 EMVALRSKGVAPERLLKVVGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEFIHLHKTG 194
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
LL A V+CGA+IGG ++ +R YAR IGL FQ++DDILDVT SS+ LGKTAGKDL
Sbjct: 195 ALLSACVICGALIGGAEDDLIDALRIYARGIGLAFQIIDDILDVTASSDVLGKTAGKDLL 254
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K TYPKL+G+E ++ A L+ +A L +++S AAPL LA+YI SR
Sbjct: 255 ADKTTYPKLLGLEESRRRAELLVSEAKAALDPWQSS-AAPLLALADYITSRDR 306
>gi|428777168|ref|YP_007168955.1| farnesyl-diphosphate synthase [Halothece sp. PCC 7418]
gi|428691447|gb|AFZ44741.1| farnesyl-diphosphate synthase [Halothece sp. PCC 7418]
Length = 307
Score = 314 bits (804), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 159/294 (54%), Positives = 210/294 (71%), Gaps = 2/294 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F + Y+ + V KALD+++ + P +I++AMRYSLLAGGKR+RP+LC+A+CELVGG
Sbjct: 15 FDLDSYLQARKAIVEKALDQSLRVGEPPQIYEAMRYSLLAGGKRLRPILCLATCELVGGS 74
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
AMP ACALEMIHTMSLIHDDLP +DND+ RR K +H+ FGE AILAGD LL+ A
Sbjct: 75 IEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKKFGEDIAILAGDGLLAYAF 134
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKT 240
E++A GV P V++ ++++ A+G GLV G+ VD+ASEG D++L+ L YIH HKT
Sbjct: 135 EYIATYTQGVEPAAVLKVVSKLGHAVGATGLVGGQVVDLASEGNPDINLETLNYIHTHKT 194
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
LLEA VV GA++GG ++ R+ YA IGL FQ+VDDILD+T + EELGKTAGKDL
Sbjct: 195 GALLEACVVSGAILGGATEEDLGRLSRYAYDIGLAFQIVDDILDITATQEELGKTAGKDL 254
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ KATYP+L+G+E +K+ A EL A ELA + S A L +A IA+R+N
Sbjct: 255 EADKATYPRLLGLEASKAKADELTEAACAELASYGDS-AMALQAIAQLIANRKN 307
>gi|119509103|ref|ZP_01628254.1| Polyprenyl synthetase [Nodularia spumigena CCY9414]
gi|119466269|gb|EAW47155.1| Polyprenyl synthetase [Nodularia spumigena CCY9414]
Length = 309
Score = 314 bits (804), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 156/296 (52%), Positives = 213/296 (71%), Gaps = 3/296 (1%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
TF Y+ ++ + ALD+A+ + P KI+++MRYSLLAGGKR+RP+LC+A+CE++GG
Sbjct: 15 TFNLAAYLQKRKKLCETALDQAIPVIYPEKIYESMRYSLLAGGKRLRPILCLAACEMIGG 74
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
S AMP ACA+EMIHTMSLIHDDLP +DND+ RR + +H+V+G+ AILAGD LL+ A
Sbjct: 75 TISMAMPTACAMEMIHTMSLIHDDLPAMDNDDYRRGRLTNHKVYGDDIAILAGDGLLAYA 134
Query: 181 LEHVAVNI-AGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVH 238
E VA VS +RV++ IA + A+G GLV G+ VD+ SEGK D+SL+ L +IH H
Sbjct: 135 FEFVATQTPENVSRERVLQVIARLGKALGAAGLVGGQVVDLDSEGKTDISLETLNFIHNH 194
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KTA LLEA+VVCG ++ G ++ V+R+ Y++ IGL FQ++DDILD+T + E+LGKTAGK
Sbjct: 195 KTAALLEASVVCGGIVAGASSENVQRLSRYSQNIGLAFQIIDDILDITATQEQLGKTAGK 254
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
DL + K TYP L GIE ++S A +L+ A +EL F A PL LA+YI SR +
Sbjct: 255 DLIAKKVTYPSLWGIEESRSKAQQLVEAACKELETF-GQLAQPLNALAHYITSRNH 309
>gi|434391876|ref|YP_007126823.1| farnesyl-diphosphate synthase [Gloeocapsa sp. PCC 7428]
gi|428263717|gb|AFZ29663.1| farnesyl-diphosphate synthase [Gloeocapsa sp. PCC 7428]
Length = 308
Score = 313 bits (803), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 160/307 (52%), Positives = 211/307 (68%), Gaps = 4/307 (1%)
Query: 51 VFESTDIPLPTFPFE--EYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRP 108
V ++ P PF+ Y+ ++ QV ALD A+ + P KI++AMRYSLLAGGKR+RP
Sbjct: 3 VTDNPQTPQEKVPFDLPAYLQQRQSQVEAALDRAIPIAYPEKIYEAMRYSLLAGGKRLRP 62
Query: 109 LLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGEST 168
+LC+A+CEL GG A+P ACALEMIHTMSLIHDDLP +DND+ RR +H+V+GE
Sbjct: 63 ILCLATCELAGGTTEMAIPTACALEMIHTMSLIHDDLPAMDNDDYRRGMLTNHKVYGEDI 122
Query: 169 AILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DV 227
AILAGD LL+ A E+VA V RV++ I+ + A+G GLV G+ VD+ SEGK DV
Sbjct: 123 AILAGDGLLAYAFEYVAAKTENVPAPRVLQVISRLGRAVGAAGLVGGQVVDLESEGKADV 182
Query: 228 SLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTK 287
S+ L +IH HKTA LLEA V CGA++ G +++R+ YA+ IGL FQ+VDDILD+T
Sbjct: 183 SIDTLNFIHNHKTAALLEACVACGAILAGAPEADLQRLTRYAQNIGLAFQIVDDILDITA 242
Query: 288 SSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLAN 347
+ EELGKTAGKDL + KATYP + G+E ++ A +L+ AI EL F KA PL +A
Sbjct: 243 TQEELGKTAGKDLQAQKATYPSIWGLEESQRQARQLIQAAIAELDSF-GEKALPLQAIAE 301
Query: 348 YIASRQN 354
+I SR +
Sbjct: 302 FITSRTH 308
>gi|434403680|ref|YP_007146565.1| geranylgeranyl pyrophosphate synthase [Cylindrospermum stagnale PCC
7417]
gi|428257935|gb|AFZ23885.1| geranylgeranyl pyrophosphate synthase [Cylindrospermum stagnale PCC
7417]
Length = 309
Score = 313 bits (802), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 157/290 (54%), Positives = 213/290 (73%), Gaps = 3/290 (1%)
Query: 67 YMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAM 126
Y+ + + N ALD+++ + P KI+++MRYSLLAGGKR+RP+LC+A+CE++GG AM
Sbjct: 21 YLKERQKLCNTALDQSIPVVYPEKIYESMRYSLLAGGKRIRPILCLAACEMMGGTIDMAM 80
Query: 127 PAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAV 186
P ACALEMIHTMSLIHDDLP +DND+ RR K +H+V+GE+ AILAGD LL+LA E A
Sbjct: 81 PTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGENIAILAGDGLLALAFEFPAT 140
Query: 187 NI-AGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKTAKLL 244
A V +RV++ IA + A+G GLV G+ VD+ SEGK D+SL+ L +IH HKTA LL
Sbjct: 141 QTPANVPHERVLQVIARLGKALGAAGLVGGQVVDLDSEGKLDISLETLNFIHNHKTAALL 200
Query: 245 EAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGK 304
EA+VVCG ++ G ++ +++R+ YA+ IGL FQ++DDILD+T + E+LGKTAGKDL + K
Sbjct: 201 EASVVCGGLLAGASSEDIQRLTRYAQSIGLAFQIIDDILDITATLEQLGKTAGKDLTAKK 260
Query: 305 ATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
TYP L GIE ++S A +L+ A ELA F KA PL +A+YI SR +
Sbjct: 261 VTYPSLWGIEESRSKATQLVEAACAELAPF-GEKALPLQAIAHYIVSRNH 309
>gi|443328518|ref|ZP_21057114.1| geranylgeranyl pyrophosphate synthase [Xenococcus sp. PCC 7305]
gi|442791817|gb|ELS01308.1| geranylgeranyl pyrophosphate synthase [Xenococcus sp. PCC 7305]
Length = 310
Score = 313 bits (802), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 150/296 (50%), Positives = 214/296 (72%), Gaps = 4/296 (1%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
TF Y+ + V ALD+++ + P KI+++MRYSLLAGGKR+RP+LC+A+C L GG
Sbjct: 17 TFDLNSYLKEQKALVETALDQSLAIGIPEKIYESMRYSLLAGGKRLRPILCLATCRLTGG 76
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
AMP ACALEMIHTMSLIHDDLP +DND+ RR K +H+V+GE AILAGD LL+ A
Sbjct: 77 STEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAGDGLLAYA 136
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHK 239
E+VA V+P+ +++ IA + + +G EGLV G+ +D+ SEGK D++ + L +IH HK
Sbjct: 137 FEYVANKTDNVAPENIIKVIARLGNTVGAEGLVGGQVLDLESEGKTDITAETLSFIHTHK 196
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T LLE +VV GA++ G +A E+ ++ Y++ IGL FQ++DDILD+T + E+LGKTAGKD
Sbjct: 197 TGALLETSVVTGAILAGASAEEIIKLTKYSQNIGLAFQIIDDILDITATDEQLGKTAGKD 256
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELA-YFEASKAAPLYFLANYIASRQN 354
LA+ KATYP L G+E +++ A +L+ +A+++LA Y EA A PL +A +I +R +
Sbjct: 257 LAAQKATYPSLWGLEKSQAEAEKLIAEALDQLASYGEA--AEPLRAIAKFIVTRNH 310
>gi|427737891|ref|YP_007057435.1| geranylgeranyl pyrophosphate synthase [Rivularia sp. PCC 7116]
gi|427372932|gb|AFY56888.1| geranylgeranyl pyrophosphate synthase [Rivularia sp. PCC 7116]
Length = 311
Score = 313 bits (802), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 156/309 (50%), Positives = 212/309 (68%), Gaps = 2/309 (0%)
Query: 47 AQNSVFESTDIPLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRV 106
A N T+ F Y+ + + V ALD ++ + P KI++AMRYSLLAGGKR+
Sbjct: 4 ADNLTKNETESKQSKFDLSVYLKERQKLVETALDNSIAVVYPEKIYEAMRYSLLAGGKRL 63
Query: 107 RPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGE 166
RP+LC+A+CE+ GG+ AMP ACALEMIHTMSLIHDDLP +DND+ RR K +H+V+G+
Sbjct: 64 RPILCLATCEMTGGNTEIAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGD 123
Query: 167 STAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK- 225
AILAGD LL+ A E+VA N V P ++++ I+ + A+G GLV G+ VD+ EGK
Sbjct: 124 DVAILAGDGLLAYAFEYVATNTKNVPPTQILQVISRLGRAVGAAGLVGGQVVDLEMEGKT 183
Query: 226 DVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDV 285
DVSL+ L +IH HKTA LLEA+VVCG ++ G + ++++++ Y++ IGL FQ+VDDILD+
Sbjct: 184 DVSLETLNFIHNHKTAALLEASVVCGGILSGTSPEDIQKLQRYSQNIGLAFQIVDDILDI 243
Query: 286 TKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFL 345
T + E+LGKTAGKDL + K TYP L G+E +K A L+ A EL F +A PL L
Sbjct: 244 TATQEQLGKTAGKDLEAQKVTYPSLWGLEESKKQAQLLVEAACAELEPF-GEQAKPLVAL 302
Query: 346 ANYIASRQN 354
A +I SR N
Sbjct: 303 AYFITSRSN 311
>gi|443323350|ref|ZP_21052357.1| geranylgeranyl pyrophosphate synthase [Gloeocapsa sp. PCC 73106]
gi|442786914|gb|ELR96640.1| geranylgeranyl pyrophosphate synthase [Gloeocapsa sp. PCC 73106]
Length = 309
Score = 313 bits (802), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 152/294 (51%), Positives = 210/294 (71%), Gaps = 2/294 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F + Y+ + + ALD ++ + P KI++AMRYSLLAGGKR+RP+LC+A+CEL+GG
Sbjct: 17 FDLKTYLDAQKTIIEAALDRSLSISKPEKIYEAMRYSLLAGGKRLRPILCLATCELMGGT 76
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
A+P ACALEMIHTMSLIHDDLP +DND+ RR K +H+V+G+ AILAGD LL+ A
Sbjct: 77 SVIALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDIAILAGDGLLAYAF 136
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKT 240
E+VA GV P+R+++ I + A+G EGLV G+ +D+ SEGK D+S + L +IH HKT
Sbjct: 137 EYVATQTQGVPPERLIKVIIHLSHAVGAEGLVGGQVLDLESEGKTDISAETLTFIHTHKT 196
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
LLEA V+ GA + G N ++ER+ YA+ IGL FQ++DDILD+T + EELGKTAGKDL
Sbjct: 197 GALLEACVLSGADLAGANREDLERLSKYAQNIGLAFQIIDDILDITATVEELGKTAGKDL 256
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K TYP L GIE +++ A +L+ AI +L + KA PL +A+YI +R++
Sbjct: 257 KAQKVTYPSLWGIEASQTQAQQLVEGAIAQLTVY-GEKADPLRAIASYIVTRKH 309
>gi|170077705|ref|YP_001734343.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7002]
gi|169885374|gb|ACA99087.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7002]
Length = 302
Score = 313 bits (801), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 157/294 (53%), Positives = 210/294 (71%), Gaps = 3/294 (1%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F +Y+ + V ALD+++V+ PV I++AMRYSLLAGGKR+RP+LC+A+CE++GG
Sbjct: 11 FSLAQYLQEQKTIVETALDQSLVITEPVTIYEAMRYSLLAGGKRLRPILCLAACEMLGGT 70
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
+ AM ACALEMIHTMSLIHDDLP +DND+ RR KP +H+V+GE AILAGDALLS A
Sbjct: 71 AAMAMNTACALEMIHTMSLIHDDLPAMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAF 130
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKT 240
E+VA V +R+++ I + A+G EGLV G+ VD+ SEGK DV+++ L +IH HKT
Sbjct: 131 EYVA-RTPDVPAERLLQVIVRLGQAVGAEGLVGGQVVDLESEGKTDVAVETLNFIHTHKT 189
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
LLE V GA++ G EV+ + YA+ IGL FQ+VDDILD+T ++EELGKTAGKDL
Sbjct: 190 GALLEVCVTAGAILAGAKPEEVQLLSRYAQNIGLAFQIVDDILDITATAEELGKTAGKDL 249
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K TYP L GIE +++ A +L+ +AI L + KA PL LA YI +R+N
Sbjct: 250 EAQKVTYPSLWGIEKSQAEAQKLVAEAIASLEPY-GEKANPLKALAEYIVNRKN 302
>gi|119489387|ref|ZP_01622167.1| Polyprenyl synthetase [Lyngbya sp. PCC 8106]
gi|119454660|gb|EAW35806.1| Polyprenyl synthetase [Lyngbya sp. PCC 8106]
Length = 287
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 159/286 (55%), Positives = 202/286 (70%), Gaps = 3/286 (1%)
Query: 70 RKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAA 129
RKAE V +ALD ++ + P KI++AMRYSLLAGGKR+RP+LC+A+CEL GG AMP A
Sbjct: 4 RKAE-VEQALDRSIAVIYPEKIYEAMRYSLLAGGKRLRPILCLATCELAGGTMEMAMPTA 62
Query: 130 CALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIA 189
C+LEMIHTMSLIHDDLP +DND+ RR + +H+V+GE AILAGD LLS A E VA
Sbjct: 63 CSLEMIHTMSLIHDDLPAMDNDDYRRGQLTNHKVYGEDIAILAGDGLLSYAFEFVATQTT 122
Query: 190 GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKTAKLLEAAV 248
V P +V+ I + A+G GLV G+ VD+ SEGK D++ ++L +IH HKT LLEA V
Sbjct: 123 NVPPQQVLDVIGHLGRAVGAAGLVGGQVVDVESEGKTDITEEQLTFIHTHKTGALLEACV 182
Query: 249 VCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYP 308
V GA++ G + ER+ YA+ IGL FQ+VDDILD+T + EELGKTAGKDL + KATYP
Sbjct: 183 VSGAILAGTSTENRERLSRYAQKIGLAFQIVDDILDITATQEELGKTAGKDLTAQKATYP 242
Query: 309 KLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L G+E +K A +L+ +A ELA F A PL LA +I SR N
Sbjct: 243 SLWGLEESKRRANQLIAEAQAELAPF-GEAATPLVALAQFITSRSN 287
>gi|282895575|ref|ZP_06303709.1| Polyprenyl synthetase [Raphidiopsis brookii D9]
gi|281199415|gb|EFA74279.1| Polyprenyl synthetase [Raphidiopsis brookii D9]
Length = 309
Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 154/295 (52%), Positives = 213/295 (72%), Gaps = 3/295 (1%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F Y+ + + + ALD+++ L P KI++AMRYSLLAGGKRVRP+LC+A+CE++GG
Sbjct: 16 FNLYAYLGERQQLCDAALDKSIPLVYPEKIYEAMRYSLLAGGKRVRPILCLATCEMIGGT 75
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
AMP ACA+EMIHTMSLIHDDLP +DND+ RR K +H+V+GE AILAGD LL+L+
Sbjct: 76 IGMAMPTACAMEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAGDGLLALSF 135
Query: 182 EHVAVNI-AGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHK 239
E VA V PDR ++ IA M SA G GLV G+ VD+ASEG+ ++SL+ L +IH HK
Sbjct: 136 EFVATQTPQTVPPDRTLQVIARMGSASGAPGLVGGQVVDLASEGQSNISLETLNFIHNHK 195
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
TA LLEA+VVCG +I G + +++++ Y++ IGL FQ++DDILD+T + E+LGKTAGKD
Sbjct: 196 TAALLEASVVCGGIIAGASPQDIQKLTCYSQNIGLAFQIIDDILDITATKEQLGKTAGKD 255
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ S K TYP L GIE ++ A EL+ +A +L ++ KA PL +A++I +R +
Sbjct: 256 IESAKVTYPSLWGIEESRLKAQELVEEACAQLDFY-GDKAVPLQEIAHFIINRNH 309
>gi|158337967|ref|YP_001519143.1| geranylgeranyl diphosphate synthase [Acaryochloris marina
MBIC11017]
gi|158308208|gb|ABW29825.1| geranylgeranyl diphosphate synthase [Acaryochloris marina
MBIC11017]
Length = 301
Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 158/299 (52%), Positives = 213/299 (71%), Gaps = 3/299 (1%)
Query: 58 PLPT-FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCE 116
P P+ F +Y+ ++ E V ALD ++ + P KI++AMRYSLLAGGKR+RP+LC+A+CE
Sbjct: 4 PTPSNFNLVDYLSQRRELVEAALDASIPVVYPEKIYEAMRYSLLAGGKRLRPILCLAACE 63
Query: 117 LVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDAL 176
L GG AMP ACALEMIHTMSLIHDDLP +DND+ RR KP +H+ +GE AILAGD L
Sbjct: 64 LAGGTIEMAMPTACALEMIHTMSLIHDDLPAMDNDDFRRGKPTNHKKYGEDIAILAGDGL 123
Query: 177 LSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYI 235
L+ A EHVA+ V P++V++ +A + A+ GLV G+ VD+ SEG +DV+L L +I
Sbjct: 124 LAYAYEHVAIETQQVPPEQVLKVVARLGHAVAATGLVGGQVVDLESEGAEDVTLSTLNFI 183
Query: 236 HVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKT 295
H HKT LLEA+V+ GA + G + + R +AR IGL FQ++DD+LDVT +SE+LGKT
Sbjct: 184 HAHKTGALLEASVLSGAELAGASQDLLNRCSKFARNIGLAFQIIDDVLDVTATSEKLGKT 243
Query: 296 AGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
AGKD+A+ KATYP L GI +K A L+ +A ELA + ++APL LA++I SRQ+
Sbjct: 244 AGKDVAAQKATYPSLWGIPESKRQAQHLIEEAKAELAVY-GEQSAPLQALADFITSRQS 301
>gi|443311531|ref|ZP_21041158.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 7509]
gi|442778410|gb|ELR88676.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 7509]
Length = 308
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 154/294 (52%), Positives = 208/294 (70%), Gaps = 2/294 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F Y++ V ALD A+ + P KI++AMRYSLLAGGKR+RP+LC+A+C++ GG
Sbjct: 16 FNLSAYLLEHQSLVEAALDRAISVVYPEKIYEAMRYSLLAGGKRLRPILCLATCQMAGGT 75
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
AMP ACALEMIHTMSLIHDDLP +DND+ RR K +H+V+GE AILAGD LL+ A
Sbjct: 76 LETAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLAYAF 135
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKT 240
E VA N V ++V++ IA++ A+G GLV G+ VD+ SEGK DVSL+ L +IH HKT
Sbjct: 136 EFVATNTFNVPAEQVLKVIAKLGRAVGAAGLVGGQVVDLESEGKTDVSLETLNFIHNHKT 195
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
A LLEA+VVCG ++ G + +++R+ +++ IGL FQ++DD+LD+T + E+LGKTAGKDL
Sbjct: 196 AALLEASVVCGGILAGMSEEDLQRLSGFSQNIGLAFQIIDDVLDITSTQEQLGKTAGKDL 255
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K TYP L GIE + A +L+ AI +L F KA PL +A+YI SR +
Sbjct: 256 QAQKVTYPSLWGIEESLHQARQLIAAAIAQLEPF-GDKATPLKAIAHYITSRTH 308
>gi|427717935|ref|YP_007065929.1| farnesyl-diphosphate synthase [Calothrix sp. PCC 7507]
gi|427350371|gb|AFY33095.1| farnesyl-diphosphate synthase [Calothrix sp. PCC 7507]
Length = 309
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 159/296 (53%), Positives = 208/296 (70%), Gaps = 3/296 (1%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
TF Y+ + + ALD+A+ + P KI+++MRYSLLAGGKRVRP+LC+A+CE+ GG
Sbjct: 15 TFNLSAYLKERQKLCETALDQAIPIIYPEKIYESMRYSLLAGGKRVRPILCLATCEMTGG 74
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
AMP ACA+EMIHTMSLIHDDLP +DND+ RR K +H+V+GE AILAGD LL+ A
Sbjct: 75 TIDMAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAGDGLLAFA 134
Query: 181 LEHVAVNIAGVSP-DRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVH 238
E VA P DRV+ +A + A+G GLV G+ VD+ SEGK D SL+ L +IH H
Sbjct: 135 FEFVAKQTPQDVPRDRVLDVVARLGRALGAAGLVGGQVVDLESEGKSDTSLETLNFIHNH 194
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KTA LLEA+VVCG ++ G ++ +V+R+ YA+ IGL FQ+VDDILD+T + E+LGKTAGK
Sbjct: 195 KTAALLEASVVCGGILTGASSEDVQRLTRYAQNIGLAFQIVDDILDITATQEQLGKTAGK 254
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
DL + K TYP L GIE +++ A EL+ +A EL F S A PL +A YI SR +
Sbjct: 255 DLKAQKVTYPSLWGIEESRAKAQELVEEACVELESFGES-AQPLKAIAYYITSRNH 309
>gi|428305626|ref|YP_007142451.1| polyprenyl synthetase [Crinalium epipsammum PCC 9333]
gi|428247161|gb|AFZ12941.1| Polyprenyl synthetase [Crinalium epipsammum PCC 9333]
Length = 312
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 151/297 (50%), Positives = 211/297 (71%), Gaps = 2/297 (0%)
Query: 59 LPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELV 118
L F Y+ + QV ALD ++ + P KI++AMRYSLLAGGKR+RP+LC+A+CE++
Sbjct: 17 LAAFDLSSYLAQIQPQVEAALDNSLPVVYPEKIYEAMRYSLLAGGKRLRPILCLATCEML 76
Query: 119 GGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLS 178
GG + AMP ACALEM+HTMSLIHDDLP +DND+ RR K +H+V+GE AILAGD LL+
Sbjct: 77 GGTTAMAMPTACALEMVHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLA 136
Query: 179 LALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHV 237
+ E++A GV ++V++ IA++ A+G GLV G+ VD+ EGK D S++ L YIH
Sbjct: 137 YSFEYIAKATQGVPAEQVLQVIAQLSHAVGATGLVGGQVVDLECEGKSDTSVETLTYIHT 196
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
HKT LLE+ VVCGA++ +A ++++ YA+ IGL FQ+VDDILD+T + EELGKTAG
Sbjct: 197 HKTGALLESCVVCGAILASASAEVLQKLSRYAQNIGLAFQIVDDILDITATQEELGKTAG 256
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
KDL + KATYP + G++ ++ A +L+ +A ELA F K PL +A++I SR +
Sbjct: 257 KDLQAQKATYPSIWGLDQSRRQAQKLVDEAKAELASF-GEKGRPLMAIADFITSRTH 312
>gi|113477591|ref|YP_723652.1| farnesyl-diphosphate synthase [Trichodesmium erythraeum IMS101]
gi|110168639|gb|ABG53179.1| farnesyl-diphosphate synthase [Trichodesmium erythraeum IMS101]
Length = 316
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 157/295 (53%), Positives = 205/295 (69%), Gaps = 2/295 (0%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
TF Y++ + V KALD ++ + P KI++AMRYSLLAGGKR+RP+LC+A+CEL GG
Sbjct: 23 TFDLSNYLVERKALVEKALDNSIKIVYPEKIYEAMRYSLLAGGKRLRPILCLATCELSGG 82
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
+ AMP ACALEMIHTMSLIHDDLP +DND+ RR + +H+V+GE AILAGD LLS A
Sbjct: 83 NIEMAMPTACALEMIHTMSLIHDDLPSMDNDDYRRGQLTNHKVYGEDIAILAGDGLLSYA 142
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVHK 239
E V V P +V++ IA + A G GLV G+ VD+ASEG VS K L +IH HK
Sbjct: 143 FEFVVTQTKNVLPKQVLQVIARLGKASGAAGLVGGQVVDLASEGISQVSEKTLHFIHTHK 202
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T LLEA+VVCGA++ + + R+ YA+ IGL FQ+VDDILD+T ++EELGKTAGKD
Sbjct: 203 TGALLEASVVCGAILADVSQANLYRLERYAQNIGLAFQIVDDILDITATTEELGKTAGKD 262
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ + KATYP + G+E ++ A +L+ +A EL F K PL LA++I SR N
Sbjct: 263 IEAKKATYPVIWGLEKSRFQAQKLVEKAKAELEVF-GDKVMPLIALADFIISRSN 316
>gi|318040269|ref|ZP_07972225.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CB0101]
Length = 310
Score = 311 bits (796), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 158/297 (53%), Positives = 208/297 (70%), Gaps = 1/297 (0%)
Query: 59 LPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELV 118
+ +F F Y+ +V ALD ++ + P + ++MRYSLLAGGKR+RP+LC+A+CEL
Sbjct: 14 MTSFDFAAYLEASRLKVEAALDGSLGPERPESLRESMRYSLLAGGKRLRPILCLAACELA 73
Query: 119 GGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLS 178
GGD + AMP A ALEMIHTMSLIHDDLP +DND+ RR P +H+V+GE+ AILAGDALL+
Sbjct: 74 GGDSAQAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGMPTNHKVYGEANAILAGDALLT 133
Query: 179 LALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
A E VA+ GV +++++ + E+ A G GLV G+ VD+ EGK+V L+ LEYIH+H
Sbjct: 134 RAFEMVALRSPGVPAEQLLKVVGELSLASGAPGLVGGQVVDLECEGKNVDLETLEYIHLH 193
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT LL A V+ GA+I G +E +R YAR IGL FQ++DDILDVT SSE LGKTAGK
Sbjct: 194 KTGALLRACVLTGALIAGAPDALLEALRTYARGIGLAFQIIDDILDVTASSEVLGKTAGK 253
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEA-SKAAPLYFLANYIASRQN 354
DL + K TYPKL+G+E ++ A L+ +A L + A KAAPL LA+YI SR
Sbjct: 254 DLTADKTTYPKLLGLEESRKRADALVAEAKAALEPWSAGGKAAPLLALADYITSRDR 310
>gi|428300108|ref|YP_007138414.1| farnesyl-diphosphate synthase [Calothrix sp. PCC 6303]
gi|428236652|gb|AFZ02442.1| farnesyl-diphosphate synthase [Calothrix sp. PCC 6303]
Length = 308
Score = 311 bits (796), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 151/293 (51%), Positives = 208/293 (70%), Gaps = 2/293 (0%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
TF + Y+ + + ALD+AV ++ P I++AMRYSL+AGGKR+RP+L IA+CE+ GG
Sbjct: 15 TFDLKAYLKDRQQLCEAALDQAVPMRYPETIYEAMRYSLMAGGKRLRPILTIATCEMTGG 74
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
AMP ACA+EM+HTMSLIHDDLP +DND+ RR K +H+V+GE AILAGD LL+ A
Sbjct: 75 TIEMAMPTACAMEMVHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLAYA 134
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHK 239
E++ + V +RV++ I+ + A+G GLV G+ VD+ SEGK D SL+ L +IH HK
Sbjct: 135 FEYIVEHTKDVPAERVLKVISRLGRAVGAAGLVGGQVVDLESEGKTDTSLETLNFIHNHK 194
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
TA LLEA VVCG ++ G + +++R+ Y++ IGL FQ++DDILD+T + E+LGKTAGKD
Sbjct: 195 TAALLEACVVCGGILAGVSEDDLQRLSRYSQNIGLAFQIIDDILDITSTQEQLGKTAGKD 254
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
LAS K TYP L GIE +++ A +L+ A +EL F KA PL +A+YI R
Sbjct: 255 LASQKVTYPSLWGIEESRNKANQLVADACQELEPF-GEKAQPLMVIAHYITQR 306
>gi|440682769|ref|YP_007157564.1| farnesyl-diphosphate synthase [Anabaena cylindrica PCC 7122]
gi|428679888|gb|AFZ58654.1| farnesyl-diphosphate synthase [Anabaena cylindrica PCC 7122]
Length = 309
Score = 311 bits (796), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 158/295 (53%), Positives = 210/295 (71%), Gaps = 3/295 (1%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F Y+ + + + ALD+A+ + P KI++AMRYSLLAGGKRVRP+LC+A+ E++GG
Sbjct: 16 FNLASYLKERQKLCDTALDQAIPVVYPEKIYEAMRYSLLAGGKRVRPILCLATSEMIGGT 75
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
AMP ACA+EMIHTMSLIHDDLP +DND+ RR K +H+V+GE AILAGD LL+LA
Sbjct: 76 IEMAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLALAF 135
Query: 182 EHVAVNIAGVSP-DRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHK 239
E VA P +R ++ IA + A+G GLV G+ VD+ SEGK D+SL+ L +IH HK
Sbjct: 136 EFVATQTPQNVPRERALQVIARLGKALGAAGLVGGQVVDLDSEGKSDISLETLNFIHNHK 195
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
TA LLEA VVCG VI G +A +VE++ Y++ IGL FQ++DDILD+T + E+LGKTAGKD
Sbjct: 196 TAALLEACVVCGGVIAGASAEDVEKLTRYSQNIGLAFQIIDDILDITSTQEQLGKTAGKD 255
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L + K TYP L GI+ +++ A +L+ A ELA F KA PL +A+YI SR +
Sbjct: 256 LKAEKVTYPSLWGIDESRAKAQQLVESACVELASF-GEKALPLQAIAHYIVSRNH 309
>gi|443314084|ref|ZP_21043676.1| geranylgeranyl pyrophosphate synthase [Leptolyngbya sp. PCC 6406]
gi|442786319|gb|ELR96067.1| geranylgeranyl pyrophosphate synthase [Leptolyngbya sp. PCC 6406]
Length = 306
Score = 310 bits (795), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 155/302 (51%), Positives = 212/302 (70%), Gaps = 2/302 (0%)
Query: 54 STDIPLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIA 113
STD +F + Y+ + ++V ALD ++ L P I++AMRYSLLAGGKR+RP+LC+A
Sbjct: 6 STDTLPQSFDLKTYLSDRQKRVEAALDASLPLAYPETIYEAMRYSLLAGGKRLRPILCLA 65
Query: 114 SCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAG 173
+CEL+GG + AMP ACALEM+HTMSLIHDDLP +DND+ RR + +H+V+GE AILAG
Sbjct: 66 ACELMGGTTAQAMPTACALEMVHTMSLIHDDLPAMDNDDYRRGQLTNHKVYGEDVAILAG 125
Query: 174 DALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKEL 232
DALL+ A EH+A V DRV+R IA++ A+G EGLV G+ VD+ASEG +V++ L
Sbjct: 126 DALLTYAFEHIARYTTDVPADRVLRVIADLGRAVGAEGLVGGQIVDLASEGDLEVTVDTL 185
Query: 233 EYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEEL 292
YIHVHKT LLE +V GA++ G + + YA+ IGL FQ+VDD+LD+T +SEEL
Sbjct: 186 NYIHVHKTGALLELSVTSGAILAGAGETAIATLSGYAQRIGLAFQIVDDVLDITATSEEL 245
Query: 293 GKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
GK+AGKDL + KATYP GI+ ++ A +L+ +A + A +APL LA+YI +R
Sbjct: 246 GKSAGKDLQAQKATYPSFWGIDESRRQAQQLIDEAKAAVLPLGAD-SAPLLALADYIVAR 304
Query: 353 QN 354
+
Sbjct: 305 TH 306
>gi|428780839|ref|YP_007172625.1| geranylgeranyl pyrophosphate synthase [Dactylococcopsis salina PCC
8305]
gi|428695118|gb|AFZ51268.1| geranylgeranyl pyrophosphate synthase [Dactylococcopsis salina PCC
8305]
Length = 305
Score = 310 bits (795), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 156/303 (51%), Positives = 212/303 (69%), Gaps = 2/303 (0%)
Query: 53 ESTDIPLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCI 112
+ST + TF E Y+ + + KALD+++ + P I++AMRYSLLAGGKR+RP+LC+
Sbjct: 4 QSTCVQNLTFDLESYLQARKAIIEKALDQSLPIAEPPVIYEAMRYSLLAGGKRLRPILCL 63
Query: 113 ASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILA 172
A+CELVGG AMP ACALEMIHTMSLIHDDLP +DND+ RR + +H+ +GE AILA
Sbjct: 64 ATCELVGGTIEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGQLTNHKKYGEDIAILA 123
Query: 173 GDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKE 231
GD LL+ A E+VA GV+P V+R IA++ +G GLV G+ +D+ASEG D+SL+
Sbjct: 124 GDGLLAYAFEYVAAQTQGVNPSSVLRVIAKLGHTVGATGLVGGQVLDLASEGNPDISLET 183
Query: 232 LEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEE 291
L YIH HKT LLEA VV GA++G + + + YA IGL FQ++DDILD+T + EE
Sbjct: 184 LNYIHTHKTGALLEACVVTGAILGEASEETLAALSRYAYNIGLAFQIIDDILDITATQEE 243
Query: 292 LGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIAS 351
LGKTAGKD+ + KATYP+L+G+E +K+ A EL+ A E++ + PL +A IA+
Sbjct: 244 LGKTAGKDVEADKATYPRLLGLEASKAKADELIEAACAEMSPY-GDAGVPLKAIAQLIAN 302
Query: 352 RQN 354
R+N
Sbjct: 303 RKN 305
>gi|87303385|ref|ZP_01086173.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 5701]
gi|87282033|gb|EAQ73995.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 5701]
Length = 300
Score = 310 bits (794), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 157/293 (53%), Positives = 208/293 (70%), Gaps = 1/293 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F Y+ QV AL+ A+ + P + +AMRYSLLAGGKR+RP+LC+A+CEL GG+
Sbjct: 9 FDFAAYLESARGQVELALEAALGPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGE 68
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
+ A+P A ALEMIHTMSLIHDDLP +DND+ RR +P +H+V+G++ AILAGDALL+ A
Sbjct: 69 VALALPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAQAILAGDALLTRAF 128
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
E VA+ GV +R+++ + E+ A G GLV G+ VD+ SEGKDV L LEYIH+HKT
Sbjct: 129 EMVALRSPGVPAERLLQVVGELSLAAGAPGLVGGQVVDLESEGKDVDLATLEYIHLHKTG 188
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
LL+A V+ GA+I G ++ +R Y+R IGL FQ++DDILDVT SSE LGKTAGKDL
Sbjct: 189 ALLQACVLTGAMIAGAPEPLLQGLRTYSRGIGLAFQIIDDILDVTASSEVLGKTAGKDLT 248
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K TYPKL+G+E ++ A L+ +A L ++AS A PL LA+YI SR
Sbjct: 249 ADKTTYPKLLGLEESRQRADALVAEAKAALQPWQAS-AQPLLALADYITSRDR 300
>gi|218437608|ref|YP_002375937.1| polyprenyl synthetase [Cyanothece sp. PCC 7424]
gi|218170336|gb|ACK69069.1| Polyprenyl synthetase [Cyanothece sp. PCC 7424]
Length = 307
Score = 310 bits (793), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 153/306 (50%), Positives = 215/306 (70%), Gaps = 6/306 (1%)
Query: 54 STDIPLP----TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPL 109
+TD +P +F Y+ + + V++AL+ ++ + P KI++AMRYSLLAGGKR+RP+
Sbjct: 3 TTDEKIPQQRTSFDLTSYLKHQKDLVDQALESSLPITKPEKIYEAMRYSLLAGGKRLRPI 62
Query: 110 LCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTA 169
LC+A+C+L+GG AMP ACALEMIHTMSLIHDDLP +DND+ RR K +H+V+GE A
Sbjct: 63 LCLATCDLMGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIA 122
Query: 170 ILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVS 228
ILAGD LLS A E+VA V P++++ IA + +G GLV G+ +D+ SEGK D++
Sbjct: 123 ILAGDGLLSYAFEYVATQTRNVPPEQILEVIARLGRTVGAAGLVGGQVLDLESEGKSDIT 182
Query: 229 LKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKS 288
+ L +IH HKT LLE +VV GA++ G EVE++ YA+ IGL FQ+VDDILD+T +
Sbjct: 183 PETLTFIHTHKTGALLETSVVSGAILAGATREEVEKLSRYAQNIGLAFQIVDDILDITAT 242
Query: 289 SEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANY 348
EELGK+ GKD+ + KATYP L GIE +K A +L+ +AI +LA + + KA PL +A +
Sbjct: 243 QEELGKSIGKDVQAQKATYPSLWGIEESKVQAQKLVDEAIAQLAPY-SEKAEPLRAIAQF 301
Query: 349 IASRQN 354
I +R +
Sbjct: 302 IVTRTH 307
>gi|72382520|ref|YP_291875.1| polyprenyl synthetase [Prochlorococcus marinus str. NATL2A]
gi|72002370|gb|AAZ58172.1| farnesyl-diphosphate synthase [Prochlorococcus marinus str. NATL2A]
Length = 299
Score = 310 bits (793), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 154/296 (52%), Positives = 211/296 (71%), Gaps = 1/296 (0%)
Query: 59 LPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELV 118
+ +F F EY+ + +V ALD ++ + P K+ ++MRYSLLAGGKR+RP+LC+A+CEL
Sbjct: 5 IASFDFAEYLEKARTRVEDALDASLGPEKPEKLRESMRYSLLAGGKRLRPILCLAACELA 64
Query: 119 GGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLS 178
GG+ A+P A ALEMIHTMSLIHDDLP +DND+ RR +P +H+V+G++ AILAGDALL+
Sbjct: 65 GGELEKALPTAVALEMIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGDAVAILAGDALLT 124
Query: 179 LALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
A E V++ G+ +R+++ I E+ A G GLV G+ VD+ EGK+V L+ LEYIH+H
Sbjct: 125 RAFEMVSIRTEGIPSERLLKIIGELSLAAGAPGLVGGQVVDLDCEGKEVDLETLEYIHLH 184
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT LL+A V CGA+IGG + +E + YAR IGL FQ++DDILDVT SSE LGKTAGK
Sbjct: 185 KTGALLKACVTCGALIGGADEKLLEALSIYARGIGLAFQIIDDILDVTASSEVLGKTAGK 244
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
DL + K TYPKL+G++ ++ A L+ +A L + K+ PL LA+YI SR
Sbjct: 245 DLIADKTTYPKLLGLDESRRRADLLVAKAKSALDPW-PEKSKPLLALADYITSRDR 299
>gi|425457244|ref|ZP_18836950.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9807]
gi|389801481|emb|CCI19370.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9807]
Length = 309
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 153/294 (52%), Positives = 206/294 (70%), Gaps = 2/294 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F Y+ K V ALD ++V+ P KI++AMRYSLLAGGKR+RP+LC+A+CEL+GG
Sbjct: 17 FSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGGS 76
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
A+P ACALEMIHTMSLIHDDLP +DND+ RR K +H+VFGE AILAGD LL+ A
Sbjct: 77 LEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYAF 136
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKT 240
E+VA V P +++ IA + +G GLV G+ +D+ SEGK D+S + L +IH KT
Sbjct: 137 EYVATQTLNVPPVQILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLSFIHTQKT 196
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
LLE +VV GAV+ G A ++ ++ YA+ IGL FQ++DD+LD+T + EELGKTAGKDL
Sbjct: 197 GALLETSVVSGAVLAGAKAEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKDL 256
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ KATYP L GIE ++ A +L+ AI EL+ ++ + A PL +A YI +R+N
Sbjct: 257 QAQKATYPSLWGIEGSRQQAQQLIDSAINELSGYDEA-AEPLRAIAEYIVNRKN 309
>gi|159903660|ref|YP_001551004.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9211]
gi|159888836|gb|ABX09050.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9211]
Length = 300
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 150/296 (50%), Positives = 210/296 (70%), Gaps = 1/296 (0%)
Query: 59 LPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELV 118
+ +F F Y+ ++ +V ALD ++ + P ++ +AMRYSLLAGGKR+RP+LC+A+CEL+
Sbjct: 6 ISSFDFAAYLAKEKIRVEAALDASLGPERPKQLREAMRYSLLAGGKRLRPILCLAACELI 65
Query: 119 GGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLS 178
G+ A+P A A+EMIHTMSLIHDDLP +DND+ RR +P +H+V+G++ AILAGDALL+
Sbjct: 66 AGESETALPTAVAIEMIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGDALAILAGDALLT 125
Query: 179 LALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
A E V++ G+S +R+++ + E+ G GLV G+ D+ EGKDV + LEYIH+H
Sbjct: 126 RAFEMVSLRSPGISAERLIKVVGELSLVAGAPGLVGGQVADLECEGKDVDIDTLEYIHIH 185
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT LL+A+VVCGA+IGG ++ +R YA IGL FQ++DDILDVT SSE LGKTAGK
Sbjct: 186 KTGALLKASVVCGALIGGAKDDLLDALRTYAEAIGLAFQIIDDILDVTSSSEVLGKTAGK 245
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
DL + K TYPKL+G++ ++ A L+ +A L +E A PL LA+YI SR
Sbjct: 246 DLIADKTTYPKLLGVDESRQRAKVLIEKAKSVLEPWE-DDATPLLALADYIISRDR 300
>gi|282901609|ref|ZP_06309527.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505]
gi|281193485|gb|EFA68464.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505]
Length = 309
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 152/295 (51%), Positives = 211/295 (71%), Gaps = 3/295 (1%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F Y+ + + + ALD+++ L P I++AMRYSLLAGGKRVRP+LC+A+CE++GG
Sbjct: 16 FNLYAYLGERQQLCDAALDKSIPLVYPETIYEAMRYSLLAGGKRVRPILCLATCEMIGGT 75
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
AMP ACA+EMIHTMSLIHDDLP +DND+ RR K +H+V+GE AILAGD LL+L+
Sbjct: 76 IEMAMPTACAMEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAGDGLLALSF 135
Query: 182 EHVAVNI-AGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHK 239
+ VA V P+R +R IA M SA G GLV G+ VD+ASEG+ ++SL+ L +IH HK
Sbjct: 136 QLVATQTPQTVPPERTLRVIARMGSASGAPGLVGGQVVDLASEGQSNISLETLNFIHNHK 195
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
TA LLEA+VVCG +I G +++++ Y++ IGL FQ++DDILD+T + E+LGKTAGKD
Sbjct: 196 TAALLEASVVCGGIIAGAAPQDIQKLTRYSQNIGLAFQIIDDILDITATKEQLGKTAGKD 255
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ S K TYP L GIE ++ A EL+ +A +L ++ KA PL +A++I +R +
Sbjct: 256 IESAKVTYPSLWGIEESRLKAQELVEEACAQLDFY-GDKAVPLQEIAHFIINRNH 309
>gi|407957152|dbj|BAM50392.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
Length = 319
Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 152/293 (51%), Positives = 206/293 (70%), Gaps = 2/293 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F +Y+ K V ALD ++ + P KI++AMRYSLLAGGKR+RP+LCI +CEL GGD
Sbjct: 27 FDLAQYLQVKKGVVEAALDSSLAIARPEKIYEAMRYSLLAGGKRLRPILCITACELCGGD 86
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
E+ A+P ACALEMIHTMSLIHDDLP +DND+ RR KP +H+V+GE AILAGD LL+ A
Sbjct: 87 EALALPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEDIAILAGDGLLAYAF 146
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKT 240
E+V + P +++ IA + +G GLV G+ +D+ SEG+ D++ + L +IH HKT
Sbjct: 147 EYVVTHTPQADPQALLQVIARLGRTVGAAGLVGGQVLDLESEGRTDITPETLTFIHTHKT 206
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
LLEA+V+ GA++ G + +R+ YA+ IGL FQVVDDILD+T + EELGKTAGKD+
Sbjct: 207 GALLEASVLTGAILAGATGEQQQRLARYAQNIGLAFQVVDDILDITATQEELGKTAGKDV 266
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
+ KATYP L+G+E +++ A L+ QAI L F S A PL +A YI +R+
Sbjct: 267 KAQKATYPSLLGLEASRAQAQSLIDQAIVALEPFGPS-AEPLQAIAEYIVARK 318
>gi|425459314|ref|ZP_18838800.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9808]
gi|389822992|emb|CCI29162.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9808]
Length = 326
Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 152/295 (51%), Positives = 206/295 (69%), Gaps = 2/295 (0%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
+F Y+ K V ALD ++V+ P KI++AMRYSLLAGGKR+RP+LC+A+CEL+GG
Sbjct: 33 SFSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGG 92
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
A+P ACALEMIHTMSLIHDDLP +DND+ RR K +H+VFGE AILAGD LL+ A
Sbjct: 93 SLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYA 152
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHK 239
E+VA V P +++ IA + +G GLV G+ +D+ SEGK D+S + L +IH K
Sbjct: 153 FEYVATQTRNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLGFIHTQK 212
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T LLE +VV GAV+ G ++ ++ YA+ IGL FQ++DD+LD+T + EELGKTAGKD
Sbjct: 213 TGALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKD 272
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L + KATYP L GIE ++ A +L+ AI EL+ ++ + A PL +A YI +R+N
Sbjct: 273 LQAQKATYPSLWGIEGSRQQAQQLIDSAINELSGYDEA-AEPLRAIAEYIVNRKN 326
>gi|223997332|ref|XP_002288339.1| geranylgeranyl pyrophosphate synthetase [Thalassiosira pseudonana
CCMP1335]
gi|220975447|gb|EED93775.1| geranylgeranyl pyrophosphate synthetase [Thalassiosira pseudonana
CCMP1335]
Length = 339
Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 157/297 (52%), Positives = 209/297 (70%), Gaps = 4/297 (1%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPV--KIHKAMRYSLLAGGKRVRPLLCIASCELV 118
+F +EY+ K + AL+ +V + P KI ++M YSL+AGGKR+RP+LCIA+CE+
Sbjct: 44 SFSLDEYLASKIGPIESALEASVKSRIPQTDKICESMAYSLMAGGKRIRPVLCIAACEMF 103
Query: 119 GGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLS 178
GG + AMP A ALEMIHTMSLIHDDLP +DND+ RR KP +H VFGE AILAGD+LLS
Sbjct: 104 GGSQDVAMPTAVALEMIHTMSLIHDDLPSMDNDDLRRGKPTNHVVFGEDVAILAGDSLLS 163
Query: 179 LALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHV 237
+ EHVA GVS +++V IA + ++G EGL G+ +D+ E K +L +L++IH+
Sbjct: 164 TSFEHVARETKGVSAEKIVDVIARLGKSVGAEGLAGGQVMDLECEAKPGTTLDDLKWIHI 223
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
HKTA LL+ AV GAV+GG EV +A IGL FQV DDILDVT SSE+LGKTAG
Sbjct: 224 HKTATLLQVAVASGAVLGGATPEEVAACELFAMNIGLAFQVADDILDVTASSEDLGKTAG 283
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
KD A+ K TYPKL+G+E +K++A +L+ +A E LA F +AAPL +A++I R+N
Sbjct: 284 KDEATDKTTYPKLLGLEESKAYARQLIDEAKESLAPF-GDRAAPLLAIADFIIDRKN 339
>gi|16329282|ref|NP_440010.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|383321022|ref|YP_005381875.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383324192|ref|YP_005385045.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383490076|ref|YP_005407752.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384435342|ref|YP_005650066.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|451813441|ref|YP_007449893.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|1651762|dbj|BAA16690.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|339272374|dbj|BAK48861.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|359270341|dbj|BAL27860.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359273512|dbj|BAL31030.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359276682|dbj|BAL34199.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|451779410|gb|AGF50379.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
Length = 302
Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 152/293 (51%), Positives = 206/293 (70%), Gaps = 2/293 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F +Y+ K V ALD ++ + P KI++AMRYSLLAGGKR+RP+LCI +CEL GGD
Sbjct: 10 FDLAQYLQVKKGVVEAALDSSLAIARPEKIYEAMRYSLLAGGKRLRPILCITACELCGGD 69
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
E+ A+P ACALEMIHTMSLIHDDLP +DND+ RR KP +H+V+GE AILAGD LL+ A
Sbjct: 70 EALALPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEDIAILAGDGLLAYAF 129
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKT 240
E+V + P +++ IA + +G GLV G+ +D+ SEG+ D++ + L +IH HKT
Sbjct: 130 EYVVTHTPQADPQALLQVIARLGRTVGAAGLVGGQVLDLESEGRTDITPETLTFIHTHKT 189
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
LLEA+V+ GA++ G + +R+ YA+ IGL FQVVDDILD+T + EELGKTAGKD+
Sbjct: 190 GALLEASVLTGAILAGATGEQQQRLARYAQNIGLAFQVVDDILDITATQEELGKTAGKDV 249
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
+ KATYP L+G+E +++ A L+ QAI L F S A PL +A YI +R+
Sbjct: 250 KAQKATYPSLLGLEASRAQAQSLIDQAIVALEPFGPS-AEPLQAIAEYIVARK 301
>gi|390440821|ref|ZP_10229021.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis sp.
T1-4]
gi|389835867|emb|CCI33147.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis sp.
T1-4]
Length = 309
Score = 307 bits (787), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 152/295 (51%), Positives = 206/295 (69%), Gaps = 2/295 (0%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
F Y+ K V ALD ++V+ P KI++AMRYSLLAGGKR+RP+LC+A+CEL+GG
Sbjct: 16 NFSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGG 75
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
A+P ACALEMIHTMSLIHDDLP +DND+ RR K +H+VFGE AILAGD LL+ A
Sbjct: 76 SLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYA 135
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHK 239
E+VA V P +++ IA + +G GLV G+ +D+ S GK D+S + L +IH HK
Sbjct: 136 FEYVATQTRNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESAGKPDISAETLGFIHTHK 195
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T LLE +VV GAV+ G ++ ++ YA+ IGL FQ++DD+LD+T ++EELGKTAGKD
Sbjct: 196 TGSLLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATNEELGKTAGKD 255
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L + KATYP L GIE ++ A +L+ AI EL+ ++ + A PL +A YI +R+N
Sbjct: 256 LQAQKATYPSLWGIEGSRQQAQQLIDSAIGELSGYDEA-AEPLRAIAEYIVNRKN 309
>gi|326494730|dbj|BAJ94484.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 358
Score = 307 bits (787), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 187/304 (61%), Positives = 229/304 (75%), Gaps = 12/304 (3%)
Query: 62 FPFEEYMIRKAEQVNKALDEAV-VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
F F+ YM +A VN ALD AV +PP +H+AMRY+LLAGGKRVRP LC+A+C + GG
Sbjct: 56 FDFKAYMGERAVAVNGALDAAVPAGEPPATLHEAMRYALLAGGKRVRPALCLAACVVSGG 115
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
E+WAM A A+EM+HTMSL+HDDLP +D+D+ RR KP H +FGE A+LAGDALL+LA
Sbjct: 116 REAWAMAPAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVMFGEPIAVLAGDALLALA 175
Query: 181 LEHVAVNIAGVSPD--------RVVRAIAEMCSAMGVEGLVAGEFVDIASEG--KDVSLK 230
+H+A ++ PD RVVRAI E+ +G EGLVAG+ VD+ G + V L
Sbjct: 176 FQHMA-SVDSYPPDVDPAKHTARVVRAIGELARCIGSEGLVAGQVVDLEMTGSTEPVPLD 234
Query: 231 ELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSE 290
LEYIH+HKTA LLEA+VV GA+IGGG+ ++ER+R YAR IGLLFQVVDDILDVTKSSE
Sbjct: 235 RLEYIHLHKTAALLEASVVIGAIIGGGSEEQIERLRKYARSIGLLFQVVDDILDVTKSSE 294
Query: 291 ELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIA 350
ELGKTAGKDLAS K TYPKL+G+E ++ FA +LL A E+LAYFE KAAPL +LANYIA
Sbjct: 295 ELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDAKEQLAYFEKEKAAPLLYLANYIA 354
Query: 351 SRQN 354
RQN
Sbjct: 355 YRQN 358
>gi|425436138|ref|ZP_18816577.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9432]
gi|425449068|ref|ZP_18828911.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 7941]
gi|389679196|emb|CCH92000.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9432]
gi|389764903|emb|CCI09068.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 7941]
Length = 309
Score = 307 bits (786), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 152/295 (51%), Positives = 205/295 (69%), Gaps = 2/295 (0%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
+F Y+ K V ALD ++V+ P KI++AMRYSLLAGGKR+RP+LC+A+CEL+GG
Sbjct: 16 SFSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGG 75
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
A+P ACALEMIHTMSLIHDDLP +DND+ RR K +H+VFGE AILAGD LL+ A
Sbjct: 76 SLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYA 135
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHK 239
E+VA V P +++ IA + +G GLV G+ +D+ SEGK D+S + L +IH K
Sbjct: 136 FEYVATQTLNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLGFIHTQK 195
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T LLE +VV GAV+ G ++ ++ YA+ IGL FQ++DD+LD+T + EELGKTAGKD
Sbjct: 196 TGALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKD 255
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L + KATYP L GIE ++ A L+ AI EL+ ++ + A PL +A YI +R+N
Sbjct: 256 LQAQKATYPSLWGIEGSRQQAQHLIDSAINELSSYDEA-AEPLRAIAEYIVNRKN 309
>gi|425446281|ref|ZP_18826289.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9443]
gi|389733543|emb|CCI02694.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9443]
Length = 309
Score = 307 bits (786), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 152/294 (51%), Positives = 205/294 (69%), Gaps = 2/294 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F Y+ K V ALD ++V+ P KI++AMRYSLLAGGKR+RP+LC+A+CEL+GG
Sbjct: 17 FSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGGS 76
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
A+P ACALEMIHTMSLIHDDLP +DND+ RR K +H+VFGE AILAGD LL+ A
Sbjct: 77 LEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYAF 136
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKT 240
E+VA V P +++ IA + +G GLV G+ +D+ SEGK D+S + L +IH KT
Sbjct: 137 EYVATQTHNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLGFIHTQKT 196
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
LLE +VV GAV+ G ++ ++ YA+ IGL FQ++DD+LD+T + EELGKTAGKDL
Sbjct: 197 GALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKDL 256
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ KATYP L GIE ++ A +L+ AI EL+ ++ + A PL +A YI +R+N
Sbjct: 257 QAQKATYPSLWGIEGSRQQAQQLIDSAINELSGYDEA-AEPLRAIAEYIVNRKN 309
>gi|443669312|ref|ZP_21134542.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
DIANCHI905]
gi|159030944|emb|CAO88634.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443330405|gb|ELS45123.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
DIANCHI905]
Length = 309
Score = 306 bits (785), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 152/295 (51%), Positives = 204/295 (69%), Gaps = 2/295 (0%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
F Y+ K V ALD ++V+ P KI++AMRYSLLAGGKR+RP+LC+A+CEL+GG
Sbjct: 16 NFSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGG 75
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
A+P ACALEMIHTMSLIHDDLP +DND+ RR K +H+VFGE AILAGD LL+ A
Sbjct: 76 SLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYA 135
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHK 239
E+VA V P +++ IA + +G GLV G+ +D+ SEGK D+S + L +IH K
Sbjct: 136 FEYVATQTLNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLGFIHTQK 195
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T LLE +VV GAV+ G ++ ++ YA+ IGL FQ++DD+LD+T + EELGKTAGKD
Sbjct: 196 TGALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKD 255
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L + KATYP L GIE ++ A L+ AI EL+ ++ + A PL +A YI +R+N
Sbjct: 256 LQAQKATYPSLWGIEGSRQQAQHLIDSAINELSSYDEA-AEPLRAIAEYIVNRKN 309
>gi|332706101|ref|ZP_08426173.1| farnesyl-diphosphate synthase [Moorea producens 3L]
gi|332355193|gb|EGJ34661.1| farnesyl-diphosphate synthase [Moorea producens 3L]
Length = 309
Score = 306 bits (784), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 150/296 (50%), Positives = 205/296 (69%), Gaps = 2/296 (0%)
Query: 60 PTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
P+ Y+ + + ALD+A+ P KI++AMRYSLLAGGKR+RP+LC+A+CEL+G
Sbjct: 15 PSLDLLTYLKERKALIESALDQALPRMEPDKIYEAMRYSLLAGGKRLRPILCLATCELMG 74
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
G AMP +CALEMIHTMSLIHDDLP +DND+ RR K +H+VFGE AILAGD LL+
Sbjct: 75 GTVEMAMPTSCALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAY 134
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVH 238
A E+ A V +V++ +A + A+G GLV G+ +D+ SEGK D+ + L +IH H
Sbjct: 135 AFEYAAAQTKNVPAPQVLQVVAWLAKAVGASGLVGGQVLDLESEGKSDIKEETLSFIHTH 194
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT LLEA VVCG ++ G A ++R+ YA+ IGL FQ+VDDILD+T + EELGKTAGK
Sbjct: 195 KTGALLEACVVCGGILAGATAANLQRLSKYAQNIGLAFQIVDDILDITATQEELGKTAGK 254
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
D+ + KATYP L G+E +K+ A EL+ +A ++ F KA PL +A++I +R +
Sbjct: 255 DIKAQKATYPSLWGLEASKAKAQELVNEAKAQIESF-GEKAQPLIAIADFIVNRTH 309
>gi|425441812|ref|ZP_18822079.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9717]
gi|389717377|emb|CCH98522.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9717]
Length = 326
Score = 306 bits (784), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 152/295 (51%), Positives = 205/295 (69%), Gaps = 2/295 (0%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
+F Y+ K V ALD ++V+ P KI++AMRYSLLAGGKR+RP+LC+A+CEL+GG
Sbjct: 33 SFSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGG 92
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
A+P ACALEMIHTMSLIHDDLP +DND+ RR K +H+VFGE AILAGD LL+ A
Sbjct: 93 SLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYA 152
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHK 239
E+VA V P +++ IA + +G GLV G+ +D+ SEGK D+S + L +IH K
Sbjct: 153 FEYVATQTLNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLGFIHTQK 212
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T LLE +VV GAV+ G ++ ++ YA+ IGL FQ++DD+LD+T + EELGKTAGKD
Sbjct: 213 TGALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKD 272
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L + KATYP L GIE ++ A L+ AI EL+ ++ + A PL +A YI +R+N
Sbjct: 273 LQAQKATYPSLWGIEGSRQQAQHLIDSAIGELSSYDEA-AEPLRAIAEYIVNRKN 326
>gi|218245046|ref|YP_002370417.1| polyprenyl synthetase [Cyanothece sp. PCC 8801]
gi|257058070|ref|YP_003135958.1| polyprenyl synthetase [Cyanothece sp. PCC 8802]
gi|218165524|gb|ACK64261.1| Polyprenyl synthetase [Cyanothece sp. PCC 8801]
gi|256588236|gb|ACU99122.1| Polyprenyl synthetase [Cyanothece sp. PCC 8802]
Length = 309
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 146/294 (49%), Positives = 201/294 (68%), Gaps = 2/294 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F Y+ K + V ALD ++ + P I++AMRYSLLAGGKR+RP+LC+ +CEL+GG
Sbjct: 17 FDLASYLKDKQQLVEAALDRSLAITRPETIYEAMRYSLLAGGKRLRPILCLTTCELLGGT 76
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
A+P ACALEMIHTMSLIHDDLP +DND+ RR K +H+ +GE AILAGD LL+ A
Sbjct: 77 LEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKKYGEDIAILAGDGLLAYAF 136
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKT 240
E+ A V P ++ + + +G GLV G+ +D+ SEGK D+++ L++IH HKT
Sbjct: 137 EYAATQTRNVDPHNLINVLGRLGRTVGPAGLVGGQVLDLESEGKPDITVDTLKFIHTHKT 196
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
LLE +VV GA++ GG+ +++R+ YA+ IGL FQ++DDILD+T + EELGKTAGKDL
Sbjct: 197 GALLETSVVSGAILAGGSTEDIQRLSQYAQNIGLAFQIIDDILDITSTQEELGKTAGKDL 256
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
KATYP L G+E +K A L+ AI +L + +KA PL +AN+I +R N
Sbjct: 257 RDQKATYPSLWGLEESKKQAQNLVSGAIAQLTPY-GNKAEPLRAIANFIVTRNN 309
>gi|440753463|ref|ZP_20932666.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
TAIHU98]
gi|440177956|gb|ELP57229.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
TAIHU98]
Length = 309
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 152/295 (51%), Positives = 205/295 (69%), Gaps = 2/295 (0%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
+F Y+ K V ALD ++V+ P KI++AMRYSLLAGGKR+RP+LC+A+CEL+GG
Sbjct: 16 SFSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGG 75
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
A+P ACALEMIHTMSLIHDDLP +DND+ RR K +H+VFGE AILAGD LL+ A
Sbjct: 76 SLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYA 135
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHK 239
E+VA V P +++ IA + +G GLV G+ +D+ SEGK D+S + L +IH K
Sbjct: 136 FEYVATQTLNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLGFIHTQK 195
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T LLE +VV GAV+ G ++ ++ YA+ IGL FQ++DD+LD+T + EELGKTAGKD
Sbjct: 196 TGALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKD 255
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L + KATYP L GIE ++ A L+ AI EL+ ++ + A PL +A YI +R+N
Sbjct: 256 LQAQKATYPSLWGIEGSRQQAQHLIDSAIGELSSYDEA-AEPLRAIAEYIVNRKN 309
>gi|425469791|ref|ZP_18848698.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9701]
gi|389880334|emb|CCI38905.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9701]
Length = 326
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 152/295 (51%), Positives = 204/295 (69%), Gaps = 2/295 (0%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
F Y+ K V ALD ++V+ P KI++AMRYSLLAGGKR+RP+LC+A+CEL+GG
Sbjct: 33 NFSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGG 92
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
A+P ACALEMIHTMSLIHDDLP +DND+ RR K +H+VFGE AILAGD LL+ A
Sbjct: 93 SLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYA 152
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHK 239
E+V V P +V+ IA + +G GLV G+ +D+ SEGK D+S + L +IH K
Sbjct: 153 FEYVVTQTRNVPPVQVLEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLGFIHTQK 212
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T LLE +VV GAV+ G ++ ++ YA+ IGL FQ++DD+LD+T + EELGKTAGKD
Sbjct: 213 TGALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKD 272
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L + KATYP L GIE ++ A +L+ AI EL+ ++ + A PL +A YI +R+N
Sbjct: 273 LQAQKATYPSLWGIEGSRQQAQQLIDSAINELSGYDEA-AEPLRAIAEYIVNRKN 326
>gi|422305087|ref|ZP_16392424.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9806]
gi|389789644|emb|CCI14373.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9806]
Length = 309
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 152/295 (51%), Positives = 205/295 (69%), Gaps = 2/295 (0%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
+F Y+ K V ALD ++V+ P KI++AMRYSLLAGGKR+RP+LC+A+CEL+GG
Sbjct: 16 SFSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGG 75
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
A+P ACALEMIHTMSLIHDDLP +DND+ RR K +H+VFGE AILAGD LL+ A
Sbjct: 76 SLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYA 135
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHK 239
E+VA V P +++ IA + +G GLV G+ +D+ SEGK D+S + L +IH K
Sbjct: 136 FEYVATQTHNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLGFIHTQK 195
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T LLE +VV GAV+ G ++ ++ YA+ IGL FQ++DD+LD+T + EELGKTAGKD
Sbjct: 196 TGALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKD 255
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L + KATYP L GIE ++ A L+ AI EL+ ++ + A PL +A YI +R+N
Sbjct: 256 LQAQKATYPSLWGIEGSRQQAQHLIDSAIGELSSYDEA-AEPLRAIAEYIVNRKN 309
>gi|220906408|ref|YP_002481719.1| polyprenyl synthetase [Cyanothece sp. PCC 7425]
gi|219863019|gb|ACL43358.1| Polyprenyl synthetase [Cyanothece sp. PCC 7425]
Length = 320
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 147/298 (49%), Positives = 210/298 (70%), Gaps = 2/298 (0%)
Query: 58 PLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCEL 117
P F Y+ + + V+ AL++++ + P KI++AMRYSL+AGGKR+RP+LC+A+CE+
Sbjct: 24 PFSGFDLVSYLKERQQWVDAALEQSISVTYPEKIYQAMRYSLMAGGKRLRPILCLATCEM 83
Query: 118 VGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALL 177
GG AMP ACALEMIHTMSLIHDDLP +DND+ RR K +H+V+GE AILAGD LL
Sbjct: 84 TGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLL 143
Query: 178 SLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIH 236
+ A E+VAV GV + +++ +A + A+ GLV G+ VD+ EG KDVS++ L +IH
Sbjct: 144 AYAFEYVAVKTQGVPAEWLLKVVARLGHAVAATGLVGGQVVDLECEGVKDVSVETLNFIH 203
Query: 237 VHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTA 296
HKT LLEA+V+CGA + G + ++++ YAR +GL FQ++DD+LD+T + EELGKTA
Sbjct: 204 AHKTGALLEASVLCGAYLTGASDEVLQKLSRYARNVGLAFQIIDDVLDITATQEELGKTA 263
Query: 297 GKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
GKDL + K TYP L GIE ++ A +L+ +A ELA F +A PL +A+++ +R +
Sbjct: 264 GKDLRAQKVTYPSLWGIEASRCQAKQLVDEAKAELATF-GERAIPLMAIADFVTARTH 320
>gi|425467096|ref|ZP_18846380.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9809]
gi|389830220|emb|CCI27968.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9809]
Length = 326
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 152/295 (51%), Positives = 206/295 (69%), Gaps = 2/295 (0%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
+F Y+ K V ALD ++V+ P KI++AMRYSLLAGGKR+RP+LC+A+CEL+GG
Sbjct: 33 SFSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGG 92
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
A+P ACALEMIHTMSLIHDDLP +DND+ RR K +H+VFGE AILAGD LL+ A
Sbjct: 93 SLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYA 152
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHK 239
E+VA V P +++ IA + +G GLV G+ +D+ S GK D+S + L +IH K
Sbjct: 153 FEYVATQTRNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESAGKPDISAETLGFIHTQK 212
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T LLE +VV GAV+ G A ++ ++ YA+ IGL FQ++DD+LD+T + EELGKTAGKD
Sbjct: 213 TGALLETSVVSGAVLAGAKAEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKD 272
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L + KATYP L GIE ++ A +L+ AI EL+ ++ + A PL +A YI +R+N
Sbjct: 273 LQAQKATYPSLWGIEESRQQAQQLIDSAIGELSGYDEA-AEPLRAIAEYIVNRKN 326
>gi|166364196|ref|YP_001656469.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
NIES-843]
gi|166086569|dbj|BAG01277.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
NIES-843]
Length = 309
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 152/295 (51%), Positives = 206/295 (69%), Gaps = 2/295 (0%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
+F Y+ K V ALD ++V+ P KI++AMRYSLLAGGKR+RP+LC+A+CEL+GG
Sbjct: 16 SFSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGG 75
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
A+P ACALEMIHTMSLIHDDLP +DND+ RR K +H+VFGE AILAGD LL+ A
Sbjct: 76 SLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYA 135
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHK 239
E+VA V P +++ IA + +G GLV G+ +D+ S GK D+S + L +IH K
Sbjct: 136 FEYVATQTRNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESAGKPDISAETLGFIHTQK 195
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T LLE +VV GAV+ G A ++ ++ YA+ IGL FQ++DD+LD+T + EELGKTAGKD
Sbjct: 196 TGALLETSVVSGAVLAGAKAEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKD 255
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L + KATYP L GIE ++ A +L+ AI EL+ ++ + A PL +A YI +R+N
Sbjct: 256 LQAQKATYPSLWGIEESRQQAQQLIDSAIGELSGYDEA-AEPLRAIAEYIVNRKN 309
>gi|172035793|ref|YP_001802294.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. ATCC 51142]
gi|354555029|ref|ZP_08974332.1| Farnesyltranstransferase [Cyanothece sp. ATCC 51472]
gi|171697247|gb|ACB50228.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. ATCC 51142]
gi|353553183|gb|EHC22576.1| Farnesyltranstransferase [Cyanothece sp. ATCC 51472]
Length = 309
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 150/294 (51%), Positives = 205/294 (69%), Gaps = 2/294 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F Y+ K + V ALD+++ + P KI++AMRYSLLAGGKR+RP+LC+ +CEL+GG
Sbjct: 17 FDLASYLKEKKQLVEAALDQSLPITRPEKIYEAMRYSLLAGGKRLRPILCLTTCELMGGT 76
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
++P ACALEMIHTMSLIHDDLP +DND+ RR K +H+V+GE AILAGDALLS A
Sbjct: 77 REMSLPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDALLSYAF 136
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKT 240
E+VA V ++ IA + +G GLV G+ +D+ SEG+ DV++ L++IH+HKT
Sbjct: 137 EYVATQTRNVDLANLMDVIARLGRTVGAAGLVGGQVLDLESEGRADVTVDTLKFIHIHKT 196
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
LLE +VV GA++ G ++ER+ YA+ IGL FQ++DDILDVT S+EELGKTAGKD
Sbjct: 197 GALLETSVVSGAILAGAKPEDIERLSRYAQNIGLAFQIIDDILDVTASTEELGKTAGKDQ 256
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
KATYP L G+E ++ A L+ AI +L+ + S A PL +A +I +R+N
Sbjct: 257 RDQKATYPSLWGLEESQKQAQALIDDAIAQLSPYGQS-AQPLTAIAQFIVARKN 309
>gi|124026221|ref|YP_001015337.1| polyprenyl synthetase [Prochlorococcus marinus str. NATL1A]
gi|123961289|gb|ABM76072.1| Polyprenyl synthetase [Prochlorococcus marinus str. NATL1A]
Length = 299
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 152/296 (51%), Positives = 210/296 (70%), Gaps = 1/296 (0%)
Query: 59 LPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELV 118
+ +F F EY+ + +V AL ++ + P K+ ++MRYSLLAGGKR+RP+LC+A+CEL
Sbjct: 5 IASFDFAEYLEKARTRVEDALGASLGPEKPEKLRESMRYSLLAGGKRLRPILCLAACELA 64
Query: 119 GGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLS 178
GG+ A+P A ALEMIHTMSLIHDDLP +DND+ RR +P +H+V+G++ AILAGDALL+
Sbjct: 65 GGELEKALPTAVALEMIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGDAVAILAGDALLT 124
Query: 179 LALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
A E V++ G+ +R+++ I E+ A G GLV G+ VD+ EGK+V L+ LEYIH+H
Sbjct: 125 RAFEMVSIRTEGIPSERLLKIIGELSLAAGAPGLVGGQVVDLDCEGKEVDLETLEYIHLH 184
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT LL+A V CGA+IGG + ++ + YAR IGL FQ++DDILDVT SSE LGKTAGK
Sbjct: 185 KTGALLKACVTCGALIGGADEKLLDALSIYARGIGLAFQIIDDILDVTASSEVLGKTAGK 244
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
DL + K TYPKL+G++ ++ A L+ +A L + K+ PL LA+YI SR
Sbjct: 245 DLIADKTTYPKLLGLDESRRRADLLVAKAKSALDPW-PEKSKPLLALADYITSRDR 299
>gi|284928678|ref|YP_003421200.1| farnesyl-diphosphate synthase [cyanobacterium UCYN-A]
gi|284809137|gb|ADB94842.1| farnesyl-diphosphate synthase [cyanobacterium UCYN-A]
Length = 309
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 154/301 (51%), Positives = 207/301 (68%), Gaps = 2/301 (0%)
Query: 55 TDIPLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIAS 114
T I F Y+ K + V ALD ++ + P KI++AMRYSLLAGGKR+RP+LC+ +
Sbjct: 10 TQIETSCFDLVSYLKEKKQLVEAALDASIPITCPEKIYEAMRYSLLAGGKRLRPILCLTT 69
Query: 115 CELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGD 174
CEL+GG A+P ACALEMIHTMSLIHDDLP +DND+ RR + +H+V+GE AILAGD
Sbjct: 70 CELMGGTVEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGQLTNHKVYGEDIAILAGD 129
Query: 175 ALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELE 233
ALLS A EHVA VS +V IA + +G GLV G+ +D+ SEGK +++ L+
Sbjct: 130 ALLSYAFEHVATQTHNVSLTNLVDVIARLGRTVGAAGLVGGQVLDLESEGKSNITSDILK 189
Query: 234 YIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELG 293
+IHVHKT LLE +VV GA++ G N ++ER+ +YA+ IGL FQ++DDILD+T + ELG
Sbjct: 190 FIHVHKTGALLETSVVSGAILAGANLEDIERLSHYAQNIGLAFQIIDDILDITSTQAELG 249
Query: 294 KTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
KTAGKD + KATYP L G+E ++ A L+ AI +LA + +A PL +A +I SR+
Sbjct: 250 KTAGKDKQAQKATYPSLWGLEESQKQAQILIEDAIAQLAPY-GREAYPLEAIARFIVSRK 308
Query: 354 N 354
N
Sbjct: 309 N 309
>gi|307152571|ref|YP_003887955.1| polyprenyl synthetase [Cyanothece sp. PCC 7822]
gi|306982799|gb|ADN14680.1| Polyprenyl synthetase [Cyanothece sp. PCC 7822]
Length = 307
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 147/294 (50%), Positives = 209/294 (71%), Gaps = 2/294 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F + Y+ ++ + V++AL+ ++ + P KI++AMRYSLLAGGKR+RP+LC+A+CEL+GG
Sbjct: 15 FDLKAYLKQQKDLVDQALEGSLPITKPEKIYEAMRYSLLAGGKRLRPILCLATCELMGGT 74
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
AMP ACALEMIHTMSLIHDDLP +DND+ RR K +H+V+GE AILAGD LLS A
Sbjct: 75 IEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLSYAF 134
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKT 240
E VA V P++V++ IA + +G GLV G+ +D+ SEGK D++ + L +IH HKT
Sbjct: 135 EFVATQTRNVPPNQVLQVIARLGRTVGAAGLVGGQVLDLESEGKLDITAETLTFIHTHKT 194
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
LLE +V+ GA++ G + + R+ YA+ IGL FQ++DDILD+T + EELGK+ GKD+
Sbjct: 195 GALLETSVLSGAILAGATSEDQRRLSRYAQNIGLAFQIIDDILDITSTQEELGKSIGKDV 254
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ KATYP L GIE +K+ A +L+ +AI +L + KA P+ +A +I SR +
Sbjct: 255 QAQKATYPSLWGIEESKAQAQKLVDEAIAQLVLY-GEKAEPIRAIAQFIVSRTH 307
>gi|56750769|ref|YP_171470.1| geranylgeranyl pyrophosphate synthase [Synechococcus elongatus PCC
6301]
gi|81299587|ref|YP_399795.1| farnesyl-diphosphate synthase [Synechococcus elongatus PCC 7942]
gi|56685728|dbj|BAD78950.1| geranylgeranyl pyrophosphate synthase [Synechococcus elongatus PCC
6301]
gi|81168468|gb|ABB56808.1| farnesyl-diphosphate synthase [Synechococcus elongatus PCC 7942]
Length = 301
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 152/294 (51%), Positives = 212/294 (72%), Gaps = 2/294 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F + Y+ + QV AL+ + Q P I+++MRYSLLA GKR+RP+LC+ASCEL GG
Sbjct: 9 FDLKSYLKERQRQVEAALNAILPPQDPPLIYESMRYSLLAEGKRLRPILCLASCELAGGT 68
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
+ A+P ACALEM+HTMSLIHDDLP +DND+ RR +P +H+V+GE AILAGDALL+ A
Sbjct: 69 AAIALPTACALEMVHTMSLIHDDLPSMDNDDFRRGRPTNHKVYGEDIAILAGDALLTYAF 128
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKT 240
E +A + V DRV++ IA + A+G EGLV G+ VD+ SEG+ DV+L+ L YIH HKT
Sbjct: 129 EAIARHTPEVPADRVLKVIAALARAVGAEGLVGGQVVDLQSEGRDDVNLETLHYIHTHKT 188
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
LLE +VV GA++ G + E++R YA+ IGL FQV+DDILD+T ++EELGKTAGKDL
Sbjct: 189 GALLEVSVVSGAILAGASEELQEQLRTYAQKIGLAFQVIDDILDITATAEELGKTAGKDL 248
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A+ KATYP L+G++ ++ +A +L+ +A ++A PL +A+YI +R++
Sbjct: 249 AAKKATYPSLLGLDASREYADQLITEAKAA-IAAFGAEADPLRAIADYITARKH 301
>gi|428224789|ref|YP_007108886.1| farnesyl-diphosphate synthase [Geitlerinema sp. PCC 7407]
gi|427984690|gb|AFY65834.1| farnesyl-diphosphate synthase [Geitlerinema sp. PCC 7407]
Length = 315
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 151/292 (51%), Positives = 203/292 (69%), Gaps = 2/292 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F + Y+ + QV ALD +V + P +++AMRYSLLAGGKR+RP+LC+A+CEL GG
Sbjct: 23 FDLKAYLTARQVQVEAALDASVPMSYPETVYEAMRYSLLAGGKRLRPILCLATCELAGGT 82
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
AMP ACALEMIHTMSLIHDDLP +DND+ RR K +H+V+GE AILAGD LL+ +
Sbjct: 83 SEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAGDGLLAYSF 142
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKT 240
E++A V +RV++ + ++ A+G GLV G+ VD+ SEG+ DVS++ L YIH HKT
Sbjct: 143 EYIASQTRNVPAERVLQVVTQVARAVGAAGLVGGQVVDLESEGRSDVSIETLNYIHTHKT 202
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
A LLEA+VV GAV+ G +A + + YA+ IGL FQ+VDDILD+T + EELGK+ GKDL
Sbjct: 203 AALLEASVVSGAVLAGASAELQQSLSRYAQNIGLAFQIVDDILDITATQEELGKSVGKDL 262
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
+ K TYP L GIE ++ A +L+ A EL + A PL +A+YI +R
Sbjct: 263 QAQKVTYPSLWGIEESQRQAAQLIESAKAELDATNPN-AQPLLAIADYIVAR 313
>gi|33865276|ref|NP_896835.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 8102]
gi|33632445|emb|CAE07257.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 8102]
Length = 309
Score = 304 bits (778), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 160/293 (54%), Positives = 214/293 (73%), Gaps = 1/293 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F+ Y+ + V +ALD+++V + P + +AMRYSLLAGGKR+RP+LC+A+CEL GGD
Sbjct: 18 FDFKAYLAKAKATVEQALDQSLVPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGD 77
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
+ AMP A ALEMIHTMSLIHDDLP +D+D+ RR +P +H+V+GE+ AILAGDALL+ A
Sbjct: 78 AAQAMPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEAVAILAGDALLTRAF 137
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
E VA+ GV P+R+++ + E+ G GLV G+ VD+ SEGK+V L+ LEYIH+HKT
Sbjct: 138 EMVALRSPGVPPERLLKVVGELSLVAGAPGLVGGQVVDLESEGKEVDLETLEYIHLHKTG 197
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
LL A V+ GA+IGG + + +R YAR IGL FQ++DDILD+T SSE LGKTAGKDL
Sbjct: 198 ALLSACVITGAMIGGADDELIAALRVYARGIGLAFQIIDDILDITASSEVLGKTAGKDLI 257
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K TYPKL+G+E ++ A +L+ +A L + ASKA PL LA+YI SR
Sbjct: 258 ADKTTYPKLLGLEESRKRAADLVQEAKGVLKPW-ASKAQPLLALADYITSRDR 309
>gi|300869086|ref|ZP_07113686.1| farnesyl-diphosphate synthase [Oscillatoria sp. PCC 6506]
gi|300332902|emb|CBN58882.1| farnesyl-diphosphate synthase [Oscillatoria sp. PCC 6506]
Length = 308
Score = 303 bits (777), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 156/298 (52%), Positives = 204/298 (68%), Gaps = 2/298 (0%)
Query: 58 PLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCEL 117
P +F Y+ +A V ALD AV + P KI++AMRYSLLAGGKR+RP+LC+A+CEL
Sbjct: 12 PESSFDLSVYLAERAAAVEAALDSAVPVTYPEKIYEAMRYSLLAGGKRLRPILCLATCEL 71
Query: 118 VGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALL 177
+GG AMP ACA EM HTMSLIHDDLP +DND+ RR K +H+V+GE AILAGD LL
Sbjct: 72 LGGTVEMAMPTACAFEMSHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLL 131
Query: 178 SLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIH 236
+ A E +A V P +V++ +A + A+G LV G+ VD+ SEG DVS + L +IH
Sbjct: 132 AYAFEFIAAQTQNVPPQQVLQVVARLGRAVGAAELVGGQVVDLESEGVSDVSEETLNFIH 191
Query: 237 VHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTA 296
HKT LLEA VVCGA++ G +++R+ YA+ IGL FQ+VDDILD+T + EELGKTA
Sbjct: 192 THKTGALLEACVVCGAILAGAEPTDLQRLSRYAQNIGLAFQIVDDILDITATQEELGKTA 251
Query: 297 GKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
GKD+ +GK TYP L GIE +K A +L+ A EL F KA PL +A++I +R +
Sbjct: 252 GKDVQAGKVTYPSLWGIEESKRRAKQLVEAAKAELTIF-GEKAEPLLAIADFITNRTH 308
>gi|427730885|ref|YP_007077122.1| geranylgeranyl pyrophosphate synthase [Nostoc sp. PCC 7524]
gi|427366804|gb|AFY49525.1| geranylgeranyl pyrophosphate synthase [Nostoc sp. PCC 7524]
Length = 309
Score = 303 bits (776), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 155/296 (52%), Positives = 210/296 (70%), Gaps = 3/296 (1%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
TF Y+ + + ALD+++ + P KI+++MRYSLLAGGKR+RP+LC+A+CE++GG
Sbjct: 15 TFDLGAYLKERKKICEAALDKSMPVVYPEKIYESMRYSLLAGGKRLRPILCLATCEMMGG 74
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
AMP ACA+EMIHTMSLIHDDLP +DND+ RR +H+V+GE AILAGD LL+ A
Sbjct: 75 TIEMAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGMLTNHKVYGEDIAILAGDGLLAYA 134
Query: 181 LEHVAVNI-AGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVH 238
E VA V+ +RV++ IA + A+G GLV G+ VD+ SEGK D+SL+ L +IH H
Sbjct: 135 FELVATQTPESVTRERVLQVIARLGRALGAAGLVGGQVVDLDSEGKSDISLETLNFIHNH 194
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KTA LLEA VVCG ++ G ++ +V+R+ YA+ IGL FQ++DDILDVT + E+LGKTAGK
Sbjct: 195 KTAALLEACVVCGGILAGASSEDVQRLSRYAQNIGLAFQIIDDILDVTATQEQLGKTAGK 254
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
DL + K TYP L G+E +++ A EL+ A EL F S A PL LA++I SR +
Sbjct: 255 DLVAQKVTYPSLWGLEKSRAKAQELIEAACAELEPFGQS-AQPLQALAHFITSRNH 309
>gi|428222583|ref|YP_007106753.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7502]
gi|427995923|gb|AFY74618.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7502]
Length = 313
Score = 303 bits (776), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 146/295 (49%), Positives = 210/295 (71%), Gaps = 2/295 (0%)
Query: 59 LPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELV 118
L +F Y+ +V KAL+ ++ ++ P I+++MRYSL+A GKR+RP+LC+A+CEL
Sbjct: 18 LESFDLCRYLATAKARVEKALEASIKVKYPETIYESMRYSLMASGKRLRPILCLATCELF 77
Query: 119 GGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLS 178
GGD+S +MP ACA+EM+HTMSLIHDDLP +DND+ RR K +H+V+GE A+LAGDALL+
Sbjct: 78 GGDDSMSMPTACAMEMVHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAVLAGDALLA 137
Query: 179 LALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHV 237
A E +A N V DR++R ++ + A+ EGLV G+ VD+ SEGK D +L+ L +IH
Sbjct: 138 YAFEFIADNTQNVPSDRILRVVSRLGRAVAAEGLVGGQVVDLESEGKPDTTLETLNFIHR 197
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
HKTA LLEA+VV G ++ G + +++R+ YA+ IGL FQ++DDILD+T +SEELGKTAG
Sbjct: 198 HKTAALLEASVVSGGILAGADTEDIKRLTIYAQNIGLAFQIIDDILDITSTSEELGKTAG 257
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
KD+ + K TYP L+GI ++ A L+ A ++ + S A PL +A+YI +R
Sbjct: 258 KDIIAQKVTYPSLLGIPESQIQAQNLIDLAKSQVQCY-GSPAIPLMRIADYIIAR 311
>gi|67924905|ref|ZP_00518297.1| Polyprenyl synthetase [Crocosphaera watsonii WH 8501]
gi|67853239|gb|EAM48606.1| Polyprenyl synthetase [Crocosphaera watsonii WH 8501]
Length = 309
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 149/294 (50%), Positives = 205/294 (69%), Gaps = 2/294 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F Y+ K + V ALD+++ + P KI++AMRYSLLAGGKR+RP+LC+ +CEL+GG
Sbjct: 17 FELASYLKEKKQLVEAALDQSLHITRPEKIYEAMRYSLLAGGKRLRPILCLTTCELMGGT 76
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
++P ACALEMIHTMSLIHDDLP +DND+ RR K +H+V+GE AILAGDALLS A
Sbjct: 77 VEMSLPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDALLSYAF 136
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKT 240
E+VA V ++ IA + +G GLV G+ +D+ SEG+ DV++ L++IH+HKT
Sbjct: 137 EYVATQTCNVDFPNLIDVIARLGRTVGAAGLVGGQVLDLESEGRTDVTVDTLKFIHIHKT 196
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
LLE +VV GA++ G ++ER+ YA+ IGL FQ++DD+LDVT SSEELGKTAGKD
Sbjct: 197 GALLETSVVSGAILAGAKPEDIERLSRYAQNIGLAFQIIDDVLDVTASSEELGKTAGKDE 256
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ KATYP L G+E ++ A L+ AI +L+ + A PL +A +I +R+N
Sbjct: 257 RAQKATYPSLWGLEESQKQAQALIDDAIAQLSPY-GQAAQPLEAIAQFIVARKN 309
>gi|416403979|ref|ZP_11687631.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Crocosphaera
watsonii WH 0003]
gi|357261577|gb|EHJ10825.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Crocosphaera
watsonii WH 0003]
Length = 307
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 149/294 (50%), Positives = 205/294 (69%), Gaps = 2/294 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F Y+ K + V ALD+++ + P KI++AMRYSLLAGGKR+RP+LC+ +CEL+GG
Sbjct: 15 FELASYLKEKKQLVEAALDQSLHITRPEKIYEAMRYSLLAGGKRLRPILCLTTCELMGGT 74
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
++P ACALEMIHTMSLIHDDLP +DND+ RR K +H+V+GE AILAGDALLS A
Sbjct: 75 VEMSLPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDALLSYAF 134
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKT 240
E+VA V ++ IA + +G GLV G+ +D+ SEG+ DV++ L++IH+HKT
Sbjct: 135 EYVATQTCNVDFPNLIDVIARLGRTVGAAGLVGGQVLDLESEGRTDVTVDTLKFIHIHKT 194
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
LLE +VV GA++ G ++ER+ YA+ IGL FQ++DD+LDVT SSEELGKTAGKD
Sbjct: 195 GALLETSVVSGAILAGAKPEDIERLSRYAQNIGLAFQIIDDVLDVTASSEELGKTAGKDE 254
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ KATYP L G+E ++ A L+ AI +L+ + A PL +A +I +R+N
Sbjct: 255 RAQKATYPSLWGLEESQKQAQALIDDAIAQLSPY-GQAAQPLEAIAQFIVARKN 307
>gi|354569185|ref|ZP_08988342.1| Farnesyltranstransferase [Fischerella sp. JSC-11]
gi|353538935|gb|EHC08440.1| Farnesyltranstransferase [Fischerella sp. JSC-11]
Length = 308
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 149/295 (50%), Positives = 208/295 (70%), Gaps = 2/295 (0%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
TF Y+ + + AL++A+ ++ P KI++AMRYSLLAGGKR+RP++C+A+CE+ GG
Sbjct: 15 TFDLITYLKERQKLCEVALEQAISVRYPEKIYEAMRYSLLAGGKRLRPIICLATCEMTGG 74
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
+ + AMP ACALEMIHTMSLIHDDLP +DND+ RR K +H+V+GE AILAGD LL+ A
Sbjct: 75 NIAIAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLAYA 134
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHK 239
E+VAVN V +R++R +A + A+G GLV G+ +D+ SEGK D+ + L++IH HK
Sbjct: 135 FEYVAVNTEDVPAERLLRVVAHLGRAVGAAGLVGGQVLDLESEGKSDICSETLDFIHHHK 194
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T LLEA+VVCG ++ G + ++R+ YA+ IGL FQ++DDILD+T + E+LGKT GKD
Sbjct: 195 TGALLEASVVCGGILAGTSEDNLKRLSCYAKNIGLAFQIIDDILDITSTQEQLGKTVGKD 254
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K TYP L GIE ++ A +L+ A EL F A PL LA++I SR +
Sbjct: 255 QKAKKVTYPSLWGIEKSQKQAQQLIESACAELEPF-GKAAEPLVALAHFITSRSH 308
>gi|428769681|ref|YP_007161471.1| farnesyl-diphosphate synthase [Cyanobacterium aponinum PCC 10605]
gi|428683960|gb|AFZ53427.1| farnesyl-diphosphate synthase [Cyanobacterium aponinum PCC 10605]
Length = 325
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 152/294 (51%), Positives = 209/294 (71%), Gaps = 2/294 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F + Y+ K E V KALD+++ ++ P KI++AMRYSLLAGGKR+RP+LC+A EL+G
Sbjct: 33 FNLKVYLQEKKEIVEKALDDSLPIEKPEKIYEAMRYSLLAGGKRLRPILCLAVAELLGQT 92
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
E AMP ACALEMIHTMSLIHDDLP +DND+ RR + +H+V+GE AILAGD LL+ A
Sbjct: 93 EDVAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGRLTNHKVYGEDIAILAGDGLLAYAF 152
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKT 240
E VA+ + + +R+V+ +A + A+G GLV G+ +D+ EGK DV+ L +IH KT
Sbjct: 153 EFVAIKTSCIPSERIVKVLAILGKAVGANGLVGGQVLDLECEGKADVTADTLSFIHRRKT 212
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
LLEA V GAV+ G + ++ R+ YA+ IGL FQ+VDDILDVT +SEELGKTAGKD+
Sbjct: 213 GALLEACVSSGAVLAGASEDDLARLSVYAQNIGLAFQIVDDILDVTATSEELGKTAGKDI 272
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
++ KATYP++ G++ ++ A EL+ AI +L + KA PL +A YI +R+N
Sbjct: 273 SAQKATYPRIWGLDTSRQKAEELIKNAIAQLDIY-GDKAQPLRAIAEYIINRKN 325
>gi|33240579|ref|NP_875521.1| polyprenyl synthetase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|33238107|gb|AAQ00174.1| Geranylgeranyl pyrophosphate synthase [Prochlorococcus marinus
subsp. marinus str. CCMP1375]
Length = 300
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 150/292 (51%), Positives = 209/292 (71%), Gaps = 1/292 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F Y+ + ++ ALD ++ + P ++ +AMRYSLLAGGKR+RP+LC+A+CEL G D
Sbjct: 9 FDFTAYLAKARTRIESALDASLGPERPNQLREAMRYSLLAGGKRLRPILCLAACELTGSD 68
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
A+ A A+EMIHTMSLIHDDLP +DND+ RR +P +H+V+GE+ AILAGDALL+ A
Sbjct: 69 SENAISTAVAIEMIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGEAIAILAGDALLTRAF 128
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
E VA+ V DR+++ + E+ G GLV G+ D+ SEGK V L LE+IH+HKT
Sbjct: 129 EMVALRSPNVPKDRLLKVVGELSLVAGAPGLVGGQVEDLESEGKAVDLDTLEFIHIHKTG 188
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
LL+A+VVCGA+IGG + + + YA+ IGL FQ+VDDILDVT SSE LGKTAGKDL
Sbjct: 189 ALLKASVVCGALIGGADEDLLIALSTYAKGIGLAFQIVDDILDVTASSEVLGKTAGKDLL 248
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
+ K+TYPKL+G++ ++ A EL+ ++ +++ + + KAAPL LA+YI +R
Sbjct: 249 ADKSTYPKLLGLDESRKKAKELIRKS-KDVIHPWSDKAAPLLSLADYIINRD 299
>gi|427706110|ref|YP_007048487.1| farnesyl-diphosphate synthase [Nostoc sp. PCC 7107]
gi|427358615|gb|AFY41337.1| farnesyl-diphosphate synthase [Nostoc sp. PCC 7107]
Length = 309
Score = 300 bits (768), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 151/296 (51%), Positives = 208/296 (70%), Gaps = 3/296 (1%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
TF Y+ + + + ALD + + P I+++MRYSLLAGGKRVRP+LC+A+CE++GG
Sbjct: 15 TFNLVAYLKERQKLCDTALDTCMPVIYPETIYESMRYSLLAGGKRVRPILCLATCEMMGG 74
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
AMP ACA+EMIHTMSLIHDDLP +DND+ RR + +H+V+G+ AILAGD LL+ A
Sbjct: 75 TIEMAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGRLTNHKVYGDDIAILAGDGLLAFA 134
Query: 181 LEHVAVNI-AGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVH 238
E VA V D+V++ IA + A+G GLV G+ VD+ SEGK D+SL+ L +IH H
Sbjct: 135 FELVATQTPENVPRDKVLQVIARLGRALGAAGLVGGQVVDLESEGKSDISLETLNFIHNH 194
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KTA LLEA VVCG ++ G ++ +V+R+ Y++ IGL FQ++DDILDVT + E+LGKTAGK
Sbjct: 195 KTAALLEACVVCGGILAGASSEDVQRLTRYSQNIGLAFQIIDDILDVTATQEQLGKTAGK 254
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
DL + K TYP L GIE +++ A +L+ A EL + S A PL +A++I +R N
Sbjct: 255 DLLAKKVTYPSLWGIEESRAKAQQLIESACAELEPY-GSLAQPLKAVAHFIVNRNN 309
>gi|87124785|ref|ZP_01080633.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9917]
gi|86167664|gb|EAQ68923.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9917]
Length = 315
Score = 300 bits (767), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 159/296 (53%), Positives = 211/296 (71%), Gaps = 3/296 (1%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F Y+ + +V ALD ++ + P + +AMRYSLLAGGKR+RP+LC+A+CEL GGD
Sbjct: 20 FDFNAYLAARKAEVESALDASLPPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGD 79
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
+ AMP A ALEMIHTMSLIHDDLP +D+D+ RR +P +H+V+GE+ AILAGDALL+ A
Sbjct: 80 PALAMPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEAVAILAGDALLTRAF 139
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
E VA+ GV +R+++ +AE+ G GLV G+ VD+ SEGK V L+ LEYIH+HKT
Sbjct: 140 EMVALRSPGVPAERLLQVVAELSLVAGAPGLVGGQVVDLESEGKQVDLETLEYIHLHKTG 199
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
LL A V+ GA+I G +A ++ +R YAR IGL FQ+VDDILDVT SS+ LGKTAGKDL
Sbjct: 200 ALLRACVITGALIAGADASRIDSLRTYARGIGLAFQIVDDILDVTASSDVLGKTAGKDLI 259
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYF---EASKAAPLYFLANYIASRQN 354
+ K TYPKL+G+E ++ A L+ +A LA F E +KA+PL LA+Y+ R
Sbjct: 260 ADKTTYPKLLGLEESRQRAKALVEEAKASLAAFKPTEPAKASPLLALADYVIGRDR 315
>gi|428177866|gb|EKX46744.1| hypothetical protein GUITHDRAFT_157722 [Guillardia theta CCMP2712]
Length = 303
Score = 300 bits (767), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 154/300 (51%), Positives = 211/300 (70%), Gaps = 10/300 (3%)
Query: 64 FEEYMIRKAEQVNKALDEAV-VLQPPV-------KIHKAMRYSLLAGGKRVRPLLCIASC 115
++Y + +V ALDE++ VL+ +H++MRYSL+AGGKR+RP+L +A+C
Sbjct: 5 IKQYFESQLPKVEAALDESMNVLKRDWPYDSKAETVHESMRYSLMAGGKRIRPILTLAAC 64
Query: 116 ELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDA 175
E++GG E AMP A A EMIHTMSLIHDDLP +DND+ RR KP +H+VFG+ A+LAGD
Sbjct: 65 EMMGGTEEMAMPTALAAEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGDDIAVLAGDG 124
Query: 176 LLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEY 234
LLS + E++A GV+P+RV+ IA +G GLV G+ VDI SEG KDV+++ L++
Sbjct: 125 LLSYSFEYIARYTKGVAPERVLDVIARCGKCVGALGLVGGQVVDIQSEGKKDVTIETLQW 184
Query: 235 IHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGK 294
IH HKTA LLE VV G ++GG N +++R+ +A IGL FQ++DDILDVT+ S LGK
Sbjct: 185 IHEHKTAALLEFCVVGGGILGGANEEQIQRLSKFAMNIGLSFQIIDDILDVTQDSATLGK 244
Query: 295 TAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
TAGKDL KATYPKLMG+E +K A L+ +A ++L + KAAPL LA++I +R+N
Sbjct: 245 TAGKDLLVDKATYPKLMGLEKSKERAEALIAEAKDQLKPW-GDKAAPLMALADFITARKN 303
>gi|428219684|ref|YP_007104149.1| farnesyl-diphosphate synthase [Pseudanabaena sp. PCC 7367]
gi|427991466|gb|AFY71721.1| farnesyl-diphosphate synthase [Pseudanabaena sp. PCC 7367]
Length = 311
Score = 300 bits (767), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 152/308 (49%), Positives = 210/308 (68%), Gaps = 9/308 (2%)
Query: 53 ESTDIPLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCI 112
+S L F Y+ + V +ALD ++ + P I++AMRYSL+AGGKR+RP+L +
Sbjct: 7 DSQTTKLDNFDMAAYLAERKVIVEQALDRSIAVTYPETIYEAMRYSLMAGGKRLRPILTL 66
Query: 113 ASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILA 172
A+CEL+GG AMP ACA+EMIHTMSLIHDDLP +DND+ RR KP +H+V+GE AILA
Sbjct: 67 AACELLGGSIEVAMPTACAMEMIHTMSLIHDDLPAMDNDDFRRGKPTNHKVYGEDMAILA 126
Query: 173 GDALLSLALEHVAVNIAGVSPD-----RVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-D 226
GD LL+ A E++A SPD +V+R IA + A+ GLV G+ VD+ EGK D
Sbjct: 127 GDGLLAYAFEYIADRTP--SPDHTTAKQVLRVIAHLGHAVAATGLVGGQVVDLECEGKTD 184
Query: 227 VSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVT 286
+ + L +IH+HKTA LLEA V CGA++ G AI+++R+ YA IGL FQ++DDILD+T
Sbjct: 185 TTAETLTFIHMHKTAALLEACVSCGAILAGATAIDLQRLSTYANNIGLAFQIIDDILDIT 244
Query: 287 KSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLA 346
++E+LGKTAGKDLA+ K TYP L GI +++ A L+ +A +L + + A PL +A
Sbjct: 245 ATAEQLGKTAGKDLAAQKVTYPSLWGIPTSQAKAQALVEEANAQLDPY-GNAAMPLKAIA 303
Query: 347 NYIASRQN 354
N+I +R N
Sbjct: 304 NFITARNN 311
>gi|186683902|ref|YP_001867098.1| polyprenyl synthetase [Nostoc punctiforme PCC 73102]
gi|186466354|gb|ACC82155.1| Polyprenyl synthetase [Nostoc punctiforme PCC 73102]
Length = 310
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 153/296 (51%), Positives = 205/296 (69%), Gaps = 3/296 (1%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
TF Y+ + + + ALD A+ + P KI++AMRYSLLAGGKRVRP+LC+A+CE++GG
Sbjct: 16 TFNLVAYLKERQKLCDNALDRAIPIIYPEKIYEAMRYSLLAGGKRVRPILCLATCEMMGG 75
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
AMP ACA+EMIHTMSLIHDDLP +DND+ RR K +H+V+GE AILAGD LL+LA
Sbjct: 76 TIEMAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAGDGLLALA 135
Query: 181 LEHVAVNI-AGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVH 238
E VA+ A V+ + ++ I + A+G GLV G+ VD+ EGK D+SL+ L +IH H
Sbjct: 136 FELVALKTPANVNRELTLQVIVRLGRALGAAGLVGGQVVDLECEGKSDISLETLNFIHRH 195
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT+ LLEA VV G +I G + +V+R+ YA IGL FQ++DDILD+T + E+LGKTAGK
Sbjct: 196 KTSALLEACVVSGGIIAGASTEDVQRLTRYAENIGLAFQIIDDILDITSTKEQLGKTAGK 255
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
D + K TYP L G+E ++ A EL+ A EL F +A PL +A++I SR N
Sbjct: 256 DQKAKKVTYPSLWGLEESRLKAQELVKVACAELEPF-GDRAKPLQAIAHFITSRNN 310
>gi|434386605|ref|YP_007097216.1| geranylgeranyl pyrophosphate synthase [Chamaesiphon minutus PCC
6605]
gi|428017595|gb|AFY93689.1| geranylgeranyl pyrophosphate synthase [Chamaesiphon minutus PCC
6605]
Length = 305
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/295 (53%), Positives = 208/295 (70%), Gaps = 2/295 (0%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
TF Y+ + Q+ ALD A+ P I+ AMRYSLLAGGKR+RP+LC+ASCEL+GG
Sbjct: 12 TFDLVAYLTERQPQIEAALDAAIRPGYPDTIYDAMRYSLLAGGKRLRPMLCLASCELIGG 71
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
MP ACALEM+HTMSLIHDDLP +D+D+ RR K +H+V+GE AILAGD LL+ +
Sbjct: 72 SLDSVMPMACALEMVHTMSLIHDDLPAMDDDDYRRGKLTNHKVYGEDIAILAGDGLLAYS 131
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHK 239
E++A GVS DRV++AIA + A+G GLV G+ VD+ SEGK D+S++ L YIH HK
Sbjct: 132 FEYIATQTQGVSADRVLKAIAHLAKAVGANGLVGGQVVDLESEGKPDISVETLTYIHNHK 191
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T LL+A VVCGA++ G ++E++ +A IGL FQ++DDILD+T + ELGKTAGKD
Sbjct: 192 TGALLKACVVCGAILAGATEAQLEKLSKFAHNIGLAFQIIDDILDITATQAELGKTAGKD 251
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ + KATYPKL G+E +K A +L+ +A LA F +A PL LA+YI R+N
Sbjct: 252 IQAQKATYPKLWGLEESKRQADKLVAEAKAILAEF-GDRARPLQALADYITDRKN 305
>gi|427418987|ref|ZP_18909170.1| geranylgeranyl pyrophosphate synthase [Leptolyngbya sp. PCC 7375]
gi|425761700|gb|EKV02553.1| geranylgeranyl pyrophosphate synthase [Leptolyngbya sp. PCC 7375]
Length = 302
Score = 297 bits (760), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 150/301 (49%), Positives = 208/301 (69%), Gaps = 3/301 (0%)
Query: 55 TDIPLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIAS 114
TD+ + F Y+ K V ALD+++ + P I+++MRYS++AGGKR+RP+LC+A+
Sbjct: 4 TDVDV-DFDLNSYLATKGADVEAALDQSLAVVYPEIIYESMRYSVMAGGKRLRPILCLAT 62
Query: 115 CELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGD 174
CELVGG + AMP ACALEM+HTMSLIHDDLP +DND+ RR K +H+V+G+ AILAGD
Sbjct: 63 CELVGGTSAQAMPTACALEMVHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDVAILAGD 122
Query: 175 ALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELE 233
ALL+ A E +A V V+ I + A+G GLV G+ VD+ASEGK D S++ L
Sbjct: 123 ALLAYAFEFIADRTEDVPATAVLDVIRRLGHAVGAAGLVGGQIVDLASEGKPDTSIETLN 182
Query: 234 YIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELG 293
+IH+HKTA LLE +VV GAV+ G + +ER+ YA+ IGL FQ+VDD+LDVT + EELG
Sbjct: 183 FIHIHKTAALLEVSVVSGAVLAGADNDTIERLSRYAQNIGLAFQIVDDVLDVTSTQEELG 242
Query: 294 KTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
K+ GKD+ + KATYP + G++ ++ A EL+ A EEL F K PL +A++I +R
Sbjct: 243 KSIGKDIQAQKATYPSIWGLDESRKKADELIQAAKEELEPFGPLK-RPLVAIADFITART 301
Query: 354 N 354
+
Sbjct: 302 H 302
>gi|254431687|ref|ZP_05045390.1| polyprenyl synthetase [Cyanobium sp. PCC 7001]
gi|197626140|gb|EDY38699.1| polyprenyl synthetase [Cyanobium sp. PCC 7001]
Length = 321
Score = 296 bits (759), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 165/307 (53%), Positives = 211/307 (68%), Gaps = 2/307 (0%)
Query: 49 NSVFESTDIPLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRP 108
+ V T P F F Y+ +V ALD A+ + P + +AMRYSLLAGGKR+RP
Sbjct: 16 DPVISGTQAP-AGFDFPAYLEAARLRVEAALDAALGPERPESLREAMRYSLLAGGKRLRP 74
Query: 109 LLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGEST 168
+LC+A+CEL GG+ AMP A ALEMIHTMSLIHDDLP +D+D+ RR +P +H+V+GE+
Sbjct: 75 ILCLAACELAGGESERAMPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEAN 134
Query: 169 AILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVS 228
AILAGDALL+ A E VA+ +GV P+R++ + E+ A G GLV G+ VD+ EGK V
Sbjct: 135 AILAGDALLTRAFEMVALRSSGVPPERLLAVVGELSLASGAPGLVGGQVVDLECEGKTVD 194
Query: 229 LKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKS 288
L LEYIH+HKT LL A V+CGA+I G + +R YAR IGL FQ++DDILDVT S
Sbjct: 195 LDTLEYIHLHKTGALLRACVLCGALIAGAPDALLTALRTYARGIGLAFQIIDDILDVTAS 254
Query: 289 SEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEA-SKAAPLYFLAN 347
SE LGKTAGKDL + K TYPKL+G+E ++ A L+ +A E LA F A +AAPL LA+
Sbjct: 255 SEVLGKTAGKDLTADKTTYPKLLGLEESRQRAQALVLEAKEALAPFAAGGRAAPLLALAD 314
Query: 348 YIASRQN 354
YI SR
Sbjct: 315 YITSRDR 321
>gi|78213443|ref|YP_382222.1| farnesyl-diphosphate synthase [Synechococcus sp. CC9605]
gi|78197902|gb|ABB35667.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CC9605]
Length = 296
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 156/293 (53%), Positives = 212/293 (72%), Gaps = 1/293 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F+ Y+ + EQV ALD ++ + P + +AMRYSLLAGGKR+RP+LC+A+CEL GG+
Sbjct: 5 FDFKAYLGKAKEQVEAALDGSLGPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGE 64
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
+ A+P A ALEMIHTMSLIHDDLP +D+D+ RR +P +H+V+GE+ AILAGDALL+ A
Sbjct: 65 ATQALPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEAVAILAGDALLTRAF 124
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
E VA+ GV +R+++ + E+ G GLV G+ VD+ SEGK+V L+ LEYIH+HKT
Sbjct: 125 EMVALRSPGVPAERLLKVVGELSLVAGAPGLVGGQVVDLESEGKEVDLETLEYIHLHKTG 184
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
LL A V+ GA+IGG + ++ +R YAR IGL FQ++DDILD+T SSE LGKTAGKDL
Sbjct: 185 ALLSACVITGAMIGGADEALIKALRTYARGIGLAFQIIDDILDITASSEVLGKTAGKDLI 244
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K TYPKL+G++ ++ A L+ +A E L + A KA PL LA++I SR
Sbjct: 245 ADKTTYPKLLGLDESRRRADALVNEAKESLQPW-AEKAVPLLALADFITSRDR 296
>gi|75908916|ref|YP_323212.1| farnesyl-diphosphate synthase [Anabaena variabilis ATCC 29413]
gi|75702641|gb|ABA22317.1| farnesyl-diphosphate synthase [Anabaena variabilis ATCC 29413]
Length = 309
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 150/295 (50%), Positives = 206/295 (69%), Gaps = 3/295 (1%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F Y+ + + ALDEA+ + P KI+++MRYSLLAGGKR+RP+LC+A+ E++GG
Sbjct: 16 FNLVAYLKERQKLCEAALDEAIPVIYPEKIYESMRYSLLAGGKRLRPILCLATSEMMGGT 75
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
AMP ACA+EMIHTMSLIHDDLP +DND+ RR +H+V+G+ AILAGD LL+ A
Sbjct: 76 IEIAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGMLTNHKVYGDDIAILAGDGLLAYAF 135
Query: 182 EHVAVNIAGVSP-DRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHK 239
E VA+ P DRV++ +A + A+G GLV G+ VD+ SEGK D+SL+ L +IH HK
Sbjct: 136 EFVAIRTPESVPRDRVLQVVARLGRALGAAGLVGGQVVDLDSEGKSDISLETLNFIHNHK 195
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
TA LLEA VVCG ++ G ++ +V+R+ Y++ IGL FQ++DDILD+T + E+LGKTAGKD
Sbjct: 196 TAALLEACVVCGGILAGASSEDVQRLSRYSQNIGLAFQIIDDILDITSTQEQLGKTAGKD 255
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L + K TYP L GIE ++ A +L+ A EL F A PL +A++I SR +
Sbjct: 256 LLAKKVTYPSLWGIEQSRVKAQQLIEAACAELEPF-GEDAQPLKAIAHFITSRNH 309
>gi|11467424|ref|NP_043281.1| prenyl transferase CrtE [Cyanophora paradoxa]
gi|1345836|sp|P48368.1|CRTE_CYAPA RecName: Full=Geranylgeranyl pyrophosphate synthase homolog;
Short=GGPP synthase; AltName:
Full=Farnesyltranstransferase
gi|1016225|gb|AAA81312.1| CrtE [Cyanophora paradoxa]
Length = 300
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 145/299 (48%), Positives = 203/299 (67%), Gaps = 3/299 (1%)
Query: 58 PLPT-FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCE 116
PL T F Y+ + E V L++++ P I+ ++RYSL AGGKR+RP+LC+ASCE
Sbjct: 3 PLQTNFNLLTYLYERKEIVEDTLNKSIPRGNPTFIYDSIRYSLSAGGKRIRPILCLASCE 62
Query: 117 LVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDAL 176
L GG A+P ACALEMIHTMSLIHDDLP +DND RR KP +H ++GE AILAGDAL
Sbjct: 63 LAGGTMEMALPTACALEMIHTMSLIHDDLPAMDNDSYRRGKPTNHIIYGEDLAILAGDAL 122
Query: 177 LSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYI 235
L+ A E +A V D +V+ IA++ ++ GLV G+ +D++SEGK D +L+ L +I
Sbjct: 123 LAYAFEFIATQTKNVPADLIVKVIAQVAHSVTTSGLVGGQIIDLSSEGKSDTTLETLNFI 182
Query: 236 HVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKT 295
H+HKT LLEAAV+ GA++ G ++ R YA+ IGL FQ++DD+LD+ + E+LGK+
Sbjct: 183 HIHKTGALLEAAVLSGALLAGAKEKDMNRFLRYAQNIGLAFQIIDDVLDIISTEEKLGKS 242
Query: 296 AGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
GKDL + KATYP G+E + A L+ +A EE+ YF+ +KA PL +A++I +R N
Sbjct: 243 IGKDLKTQKATYPSFWGVEESIKQAELLVEEAKEEILYFD-NKAIPLIAIADFIVNRNN 300
>gi|33863380|ref|NP_894940.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9313]
gi|33640829|emb|CAE21284.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9313]
Length = 306
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 152/293 (51%), Positives = 210/293 (71%), Gaps = 1/293 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F Y+ V +ALD+++ + P ++ +AMRYSLLAGGKR+RP+LC+A+CEL GG+
Sbjct: 15 FDFPAYLAAAKASVEEALDDSLGPERPEQLREAMRYSLLAGGKRLRPILCLAACELAGGE 74
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
+ A+P A ALEMIHTMSLIHDDLP +DND+ RR +P +H+V+G++ AILAGDALL+ +
Sbjct: 75 PAEALPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAGDALLTRSF 134
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
E VA+ GV P+R+++ + E+ G GLV G+ VD+ EGK+V L+ LE+IH+HKT
Sbjct: 135 EMVALRSPGVPPERLLKVVGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEFIHLHKTG 194
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
LL A V+CGA+IGG ++ +R YAR IGL FQ++DDILDVT SS+ LGKTAGKDL
Sbjct: 195 ALLSACVICGALIGGAEDDLIDALRIYARGIGLAFQIIDDILDVTASSDVLGKTAGKDLL 254
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K TYPKL+G++ ++ A L+ +A L ++AS A L LA+YI SR
Sbjct: 255 ADKTTYPKLLGLDESRRRAELLVSEAKAALEPWQASAAP-LLALADYITSRDR 306
>gi|22297564|ref|NP_680811.1| geranylgeranyl pyrophosphate synthase [Thermosynechococcus
elongatus BP-1]
gi|22293741|dbj|BAC07573.1| geranylgeranyl pyrophosphate synthase [Thermosynechococcus
elongatus BP-1]
Length = 307
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 148/298 (49%), Positives = 205/298 (68%), Gaps = 2/298 (0%)
Query: 58 PLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCEL 117
P TF + Y+ + V AL+ ++ + P KI+ AMRYSL+AGGKR+RP+LC+A+CEL
Sbjct: 11 PAGTFDLKAYLKERQALVEAALEASIPVAYPEKIYDAMRYSLMAGGKRLRPILCLATCEL 70
Query: 118 VGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALL 177
+GG AMP ACALEMIHTMSLIHDDLP +DND+ RR KP +H+V+GE AILAGD LL
Sbjct: 71 MGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKPTNHKVYGEDIAILAGDGLL 130
Query: 178 SLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIH 236
+ A E+V V + +++ +A + A+ GLV G+ VD+ EG+ D+ L+ L +IH
Sbjct: 131 AYAFEYVVEQTKNVPAEYLLKIVARLGHAVAATGLVGGQVVDLECEGQPDIGLETLHFIH 190
Query: 237 VHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTA 296
HKT LLEA+VV GA++ G + +V R+ YA IGL FQ+VDDILD+T + + LGKT
Sbjct: 191 SHKTGALLEASVVSGALLTGAHESDVARLSRYAANIGLAFQIVDDILDITSTRDVLGKTV 250
Query: 297 GKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
GKD+A+ K TYP+L G+E ++ A L+ +A ELA + A+ A PL +A+YI SR +
Sbjct: 251 GKDVAAQKMTYPRLWGLEKSRQEAERLVAEAKAELAVYGAA-AVPLQAIADYITSRSH 307
>gi|126696514|ref|YP_001091400.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9301]
gi|126543557|gb|ABO17799.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9301]
Length = 299
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 147/293 (50%), Positives = 208/293 (70%), Gaps = 1/293 (0%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
++ FE+Y+ + + + +ALD ++ + P + ++MRYSLLAGGKR+RP+LC+ASC L GG
Sbjct: 7 SYDFEKYLKQTKKVIEEALDFSLGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGG 66
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
+ S A+P A A+EMIHTMSLIHDDLP +DND+ RR +P +H+V+G++ AILAGDALL+ A
Sbjct: 67 EPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAGDALLTRA 126
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKT 240
E V++ GV P+R++ I E+ G GLV G+ VD+ EGK+V L LEYIH+HKT
Sbjct: 127 FEMVSLRSPGVDPNRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLDTLEYIHLHKT 186
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
LL+A V GA+I G N ++ + YA IGL FQ++DDILD+T SSE+LGKTAGKDL
Sbjct: 187 GALLKACVRTGAMIAGANEKLLQALTTYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDL 246
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
+ K TYPKL+G+E +K A +L+ +A + + + A A L LA++I +R
Sbjct: 247 LADKTTYPKLLGMEESKKRAFDLVEKAKKAIEPWGAD-ANHLISLADFITNRD 298
>gi|5631295|dbj|BAA82613.1| geranylgeranyl diphosphate synthase (SelGGPS) [Synechococcus
elongatus]
Length = 307
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 148/298 (49%), Positives = 205/298 (68%), Gaps = 2/298 (0%)
Query: 58 PLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCEL 117
P TF + Y+ + V AL+ ++ + P KI+ AMRYSL+AGGKR+RP+LC+A+CEL
Sbjct: 11 PAGTFDVKAYLKERQALVEAALEASIPVAYPEKIYDAMRYSLMAGGKRLRPILCLATCEL 70
Query: 118 VGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALL 177
+GG AMP ACALEMIHTMSLIHDDLP +DND+ RR KP +H+V+GE AILAGD LL
Sbjct: 71 MGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKPTNHKVYGEDIAILAGDGLL 130
Query: 178 SLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIH 236
+ A E+V V + +++ +A + A+ GLV G+ VD+ EG+ D+ L+ L +IH
Sbjct: 131 AYAFEYVVEQTKNVPAEYLLKIVARLGHAVAATGLVGGQVVDLECEGQPDIGLETLHFIH 190
Query: 237 VHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTA 296
HKT LLEA+VV GA++ G + +V R+ YA IGL FQ+VDDILD+T + + LGKT
Sbjct: 191 SHKTGALLEASVVSGALLTGAHESDVARLSRYAANIGLAFQIVDDILDITSTRDVLGKTV 250
Query: 297 GKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
GKD+A+ K TYP+L G+E ++ A L+ +A ELA + A+ A PL +A+YI SR +
Sbjct: 251 GKDVAAQKMTYPRLWGLEKSRQEAERLVAEAKAELAVYGAA-AVPLQAIADYITSRSH 307
>gi|78779464|ref|YP_397576.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9312]
gi|78712963|gb|ABB50140.1| farnesyl-diphosphate synthase [Prochlorococcus marinus str. MIT
9312]
Length = 300
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 149/290 (51%), Positives = 204/290 (70%), Gaps = 1/290 (0%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
FEEY+ + V +ALD ++ + P + ++MRYSLLAGGKR+RP+LC+ASC L GG+ S
Sbjct: 11 FEEYLKNAKKVVEEALDFSLGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGGEPS 70
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
A+P A A+EMIHTMSLIHDDLP +DND+ RR +P +H+V+G++ AILAGDALL+ A E
Sbjct: 71 LAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGDALLTRAFEM 130
Query: 184 VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
V++ GV P R++ I E+ G GLV G+ VD+ EGK+V L+ LEYIH+HKT L
Sbjct: 131 VSLRSPGVDPTRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEYIHLHKTGAL 190
Query: 244 LEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASG 303
L+A V GA+I G N ++ + YA IGL FQ++DDILD+T SSE+LGKTAGKDL +
Sbjct: 191 LKACVRTGAMIAGANEETLQALTTYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDLLAD 250
Query: 304 KATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
K TYPKL+G+E +K A +L+ A + + + A A L LA++I +R
Sbjct: 251 KTTYPKLLGMEESKKRAFDLVENAKKAIKPWGAD-AKYLISLADFITNRD 299
>gi|17227709|ref|NP_484257.1| geranylgeranyl diphosphate synthase [Nostoc sp. PCC 7120]
gi|17135191|dbj|BAB77737.1| geranylgeranyl diphosphate synthase [Nostoc sp. PCC 7120]
Length = 309
Score = 293 bits (751), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 150/295 (50%), Positives = 203/295 (68%), Gaps = 3/295 (1%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F Y+ + + ALD A+ + P KI+++MRYSLLAGGKR+RP+LC+A+ E++GG
Sbjct: 16 FNLVAYLKERQKLCEAALDAAIPIIYPEKIYESMRYSLLAGGKRLRPILCLATSEMMGGT 75
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
AMP ACA+EMIHTMSLIHDDLP +DND+ RR +H+V+GE AILAGD LL+ A
Sbjct: 76 IEIAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGMLTNHKVYGEDIAILAGDGLLAYAF 135
Query: 182 EHVAVNIAGVSP-DRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHK 239
E VA+ P DRV++ +A + A+G GLV G+ VD+ SEGK D SL+ L +IH HK
Sbjct: 136 EFVAIRTPESVPRDRVLQVVARLGRALGAAGLVGGQVVDLDSEGKSDTSLETLNFIHNHK 195
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
TA LLEA VVCG ++ G ++ V+R+ Y++ IGL FQ++DDILD+T + E+LGKTAGKD
Sbjct: 196 TAALLEACVVCGGILAGASSENVQRLSRYSQNIGLAFQIIDDILDITSTQEQLGKTAGKD 255
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L + K TYP L GIE ++ A +L+ A EL F A PL +A++I SR +
Sbjct: 256 LLAKKVTYPSLWGIEQSRVKAQQLIEAACTELEPF-GEDAQPLKAIAHFITSRNH 309
>gi|219115519|ref|XP_002178555.1| farnesyltranstransferase [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410290|gb|EEC50220.1| farnesyltranstransferase [Phaeodactylum tricornutum CCAP 1055/1]
Length = 337
Score = 293 bits (751), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 152/297 (51%), Positives = 206/297 (69%), Gaps = 5/297 (1%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVL--QPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
F +Y+ K + KALDE+VV + KI +AM+YSL+AGGKR+RP+LC+A+CE+
Sbjct: 42 FDLNQYIADKLPLIEKALDESVVSTEKETEKIVEAMKYSLMAGGKRIRPVLCLAACEMFN 101
Query: 120 -GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLS 178
GD + AMPAA +LEMIHTMSLIHDDLP +DND+ RR KP H ++GE AILAGDALLS
Sbjct: 102 DGDSTPAMPAAVSLEMIHTMSLIHDDLPSMDNDDLRRGKPTCHVIYGEDVAILAGDALLS 161
Query: 179 LALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHV 237
+ HVA GV+ DRV+ + + ++G +GL G+ +D+ EGK +L++L +IH
Sbjct: 162 DSFRHVAEQTKGVAADRVLDVVVRLGRSVGAKGLAGGQVMDLECEGKGSATLEDLRWIHT 221
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
HKTA LL+ AV GA+IGG +A EV+ +A IGL FQV DDILDVT+S+EELGKTAG
Sbjct: 222 HKTATLLQVAVASGAIIGGASAEEVKACEQFALNIGLAFQVADDILDVTQSTEELGKTAG 281
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
KD + K TYPKL+G++ A+ A L+ +A + L F +A L LA++I +R+N
Sbjct: 282 KDEDTDKTTYPKLLGLDGAREEAERLVAEAKKSLEPF-GDRATALLALADFIINRKN 337
>gi|157413540|ref|YP_001484406.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9215]
gi|157388115|gb|ABV50820.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9215]
Length = 300
Score = 293 bits (751), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 148/290 (51%), Positives = 205/290 (70%), Gaps = 1/290 (0%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
FE+Y+ + V +ALD ++ + P + ++MRYSLLAGGKR+RP+LC+ASC L GG+ S
Sbjct: 11 FEKYLKNTKKVVEEALDVSLGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGGEPS 70
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
A+P A A+EMIHTMSLIHDDLP +DND+ RR +P +H+V+G++ AILAGDALL+ A E
Sbjct: 71 LAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGDALLTRAFEM 130
Query: 184 VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
V++ GV P R++ I E+ G GLV G+ VD+ EGK+V L+ LEYIH+HKT L
Sbjct: 131 VSLRSPGVDPTRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEYIHLHKTGAL 190
Query: 244 LEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASG 303
L+A V GA+I G N ++ + YA IGL FQ++DDILD+T SSE+LGKTAGKDL +
Sbjct: 191 LKACVRTGAMIAGANEKLLQALTTYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDLLAD 250
Query: 304 KATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
K TYPKL+G+E +K A +L+ +A + + + S A L LA++I +R
Sbjct: 251 KTTYPKLLGMEESKKRAFDLVEKAKKAIEPW-GSDAKYLISLADFITNRD 299
>gi|427712083|ref|YP_007060707.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 6312]
gi|427376212|gb|AFY60164.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 6312]
Length = 314
Score = 293 bits (751), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 144/294 (48%), Positives = 204/294 (69%), Gaps = 2/294 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F + Y+ + V +AL+ ++ + P KI+ +MRYSLLAGGKR+RP+LC+A+CEL+GG
Sbjct: 22 FNLKTYLQDRKALVEQALEASITITYPEKIYDSMRYSLLAGGKRLRPILCLATCELLGGT 81
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
AMP ACALEMIHTMSLIHDDLP +DND+ RR K +H+V+GE AILAGD LL+ A
Sbjct: 82 LEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLAYAF 141
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVHKT 240
E V N GV +++++ I+ + A+ GLV G+ VD+ SEG +++++ L +IH HKT
Sbjct: 142 EFVVENTVGVKAEKLLKVISRLGHAVAATGLVGGQVVDLESEGITEITIETLNFIHSHKT 201
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
LLEA+V+ G ++ G V+R+ NYAR IGL FQ+VDD+LD+T + EELGK+ GKD+
Sbjct: 202 GALLEASVLSGGLLAGAEGDAVQRLTNYARNIGLAFQIVDDVLDITSTQEELGKSIGKDI 261
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K TYP L GIE ++ A L+ A EL+ F A+ A PL +A++I +R +
Sbjct: 262 QAQKVTYPSLWGIEASRVEAQRLVDLAKAELSPFGAA-AIPLQAIADFITARTH 314
>gi|254526220|ref|ZP_05138272.1| geranylgeranyl pyrophosphate synthetase [Prochlorococcus marinus
str. MIT 9202]
gi|221537644|gb|EEE40097.1| geranylgeranyl pyrophosphate synthetase [Prochlorococcus marinus
str. MIT 9202]
Length = 300
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 148/290 (51%), Positives = 205/290 (70%), Gaps = 1/290 (0%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
FE+Y+ + V +ALD ++ + P + ++MRYSLLAGGKR+RP+LC+ASC L GG S
Sbjct: 11 FEKYLKNTKKVVEEALDFSLGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGGKPS 70
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
A+P A A+EMIHTMSLIHDDLP +DND+ RR +P +H+V+G++ AILAGDALL+ A E
Sbjct: 71 LAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGDALLTRAFEM 130
Query: 184 VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
V++ GV P R++ I E+ G GLV G+ VD+ EGK+V L+ LEYIH+HKT L
Sbjct: 131 VSLRSPGVDPTRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEYIHLHKTGAL 190
Query: 244 LEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASG 303
L+A V GA+I G N ++ + YA IGL FQ++DDILD+T SSE+LGKTAGKDL +
Sbjct: 191 LKACVRTGAMIAGANEKLLQALTTYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDLLAD 250
Query: 304 KATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
K TYPKL+G+E +K A +L+ +A + + + S+A L LA++I +R
Sbjct: 251 KTTYPKLLGMEESKKRAFDLVEKAKKAIEPW-GSEAKYLISLADFITNRD 299
>gi|123968708|ref|YP_001009566.1| polyprenyl synthetase [Prochlorococcus marinus str. AS9601]
gi|123198818|gb|ABM70459.1| Polyprenyl synthetase [Prochlorococcus marinus str. AS9601]
Length = 300
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 147/290 (50%), Positives = 203/290 (70%), Gaps = 1/290 (0%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
FE+Y+ + V +ALD ++ + P + ++MRYSLLAGGKR+RP+LC+ASC L GG+ S
Sbjct: 11 FEKYLKNTKKVVEEALDFSLGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGGEPS 70
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
A+P A A+EMIHTMSLIHDDLP +DND+ RR +P +H+V+G++ AILAGDALL+ A E
Sbjct: 71 LAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGDALLTRAFEM 130
Query: 184 VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
V++ GV P R++ + E+ G GLV G+ VD+ EGK+V LK LEYIH+HKT L
Sbjct: 131 VSLRSPGVDPTRLLNVVGELSLVAGAPGLVGGQVVDLECEGKEVDLKTLEYIHLHKTGAL 190
Query: 244 LEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASG 303
L+A V GA+I G N + + YA IGL FQ++DDILD+T SSE+LGKTAGKDL +
Sbjct: 191 LKACVRTGAMIAGANEKLLHALTTYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDLLAD 250
Query: 304 KATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
K TYPKL+G+E +K A +L+ +A + + + A L LA++I +R
Sbjct: 251 KTTYPKLLGMEESKKRAFDLVEKAKKAIEPW-GPDAKYLISLADFITNRD 299
>gi|116071037|ref|ZP_01468306.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. BL107]
gi|116066442|gb|EAU72199.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. BL107]
Length = 296
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 154/293 (52%), Positives = 208/293 (70%), Gaps = 1/293 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F+ Y+ + E V ALD+++ + P + AMRYSLLAGGKR+RP+LC+A+CEL GGD
Sbjct: 5 FDFKAYLGKAKETVEAALDDSLGPERPESLRDAMRYSLLAGGKRLRPILCLAACELAGGD 64
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
A+P A ALEMIHTMSLIHDDLP +D+D+ RR +P +H+V+GE+ AILAGDALL+ A
Sbjct: 65 AKHAVPTAVALEMIHTMSLIHDDLPAMDDDDVRRGRPTNHKVYGEAVAILAGDALLTRAF 124
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
E VA+ GV D++++ + E+ G GLV G+ VD+ SEGK V L+ LEYIH+HKT
Sbjct: 125 EMVALRSPGVPADQLLKVVGELSLVAGAPGLVGGQVVDLESEGKQVDLETLEYIHLHKTG 184
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
LL A V+ GA+IG + + +R YAR IGL FQ++DDILD+T SSE LGKTAGKDL
Sbjct: 185 ALLSACVITGALIGNADDTLITALRTYARGIGLAFQIIDDILDITASSEVLGKTAGKDLL 244
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K TYPKL+G+E ++ A +L+ +A E L + + +A PL LA++I SR
Sbjct: 245 ADKTTYPKLLGLEESRKRADDLVREAKEALQPW-SDQAMPLLALADFITSRDR 296
>gi|297736851|emb|CBI26052.3| unnamed protein product [Vitis vinifera]
Length = 254
Score = 290 bits (743), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 142/288 (49%), Positives = 200/288 (69%), Gaps = 35/288 (12%)
Query: 68 MIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMP 127
M+ KA+ VN+ALD A+ L+ P++IHKAMRYSLL GGKR+ P++CI++CELVGG ES AMP
Sbjct: 1 MLEKAKSVNQALDTAIPLREPLEIHKAMRYSLLDGGKRIHPIVCISACELVGGQESTAMP 60
Query: 128 AACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVN 187
CA+EM+H +SL+ DDLP +DND+ RR KP++H+ FGES
Sbjct: 61 VVCAVEMLHVVSLMQDDLPCMDNDDIRRGKPSNHKAFGES-------------------- 100
Query: 188 IAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKTAKLLEA 246
E+ ++G +GLVAG+F+D++SEG ++ L+ LE IH++K LLEA
Sbjct: 101 --------------ELARSIGSQGLVAGQFLDLSSEGSPEIGLEGLESIHINKAGPLLEA 146
Query: 247 AVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKAT 306
+ V GA++GGG++ ++E +R + RC+GLL+QVVDDILD+TKS++ELGKTAGKDL + K T
Sbjct: 147 SAVIGAMLGGGSSEQMEILRKFGRCVGLLYQVVDDILDITKSTQELGKTAGKDLVADKVT 206
Query: 307 YPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
YPKL+GIE ++ FA +L G A + L+ F+ KAA L + N+ RQN
Sbjct: 207 YPKLVGIEKSREFAEKLNGDAWDMLSEFDQEKAASLLAMVNFATYRQN 254
>gi|123966393|ref|YP_001011474.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9515]
gi|123200759|gb|ABM72367.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9515]
Length = 300
Score = 290 bits (741), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 146/290 (50%), Positives = 205/290 (70%), Gaps = 1/290 (0%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
F++Y+ + V +ALD ++ + P + ++MRYSLLAGGKR+RP+LC+ASC L GG+ S
Sbjct: 11 FDKYLKETKKIVEEALDLSLGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGGEPS 70
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
A+P A A+EMIHTMSLIHDDLP +DND+ RR +P +H+V+G++ AILAGDALL+ A E
Sbjct: 71 LAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGDALLTRAFEM 130
Query: 184 VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
V++ GV P+R++ I E+ G GLV G+ VD+ EGK+V L+ LEYIH+HKT L
Sbjct: 131 VSLRSPGVDPNRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEYIHLHKTGAL 190
Query: 244 LEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASG 303
L+A V GA+I G N ++ + YA IGL FQ++DDILD+T SSE+LGKTAGKDL +
Sbjct: 191 LKACVRTGAMIAGANDELLKALTTYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDLLAD 250
Query: 304 KATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
K TYPKL+G+E +K A +L+ +A + + + A L LA++I +R
Sbjct: 251 KTTYPKLLGMEESKKRAFDLVDKAKKAIEPW-GLDAQYLISLADFITNRD 299
>gi|427701630|ref|YP_007044852.1| geranylgeranyl pyrophosphate synthase [Cyanobium gracile PCC 6307]
gi|427344798|gb|AFY27511.1| geranylgeranyl pyrophosphate synthase [Cyanobium gracile PCC 6307]
Length = 300
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 143/266 (53%), Positives = 189/266 (71%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F Y+ +V AL+ A+ + P + +AMRYSLLAGGKR+RP+L +A+CEL GGD
Sbjct: 9 FDFTAYLEAARWRVEAALESALGPERPESLREAMRYSLLAGGKRLRPILTLAACELAGGD 68
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
AMP A A+EMIHTMSLIHDDLP +DND+ RR +P +H+V+GE+ AILAGDALL+ A
Sbjct: 69 ADLAMPTAVAMEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGEAKAILAGDALLTRAF 128
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
E VA+ GV +R+++ + E+ A G GLV G+ VD+ E + V L LEYIH+HKT
Sbjct: 129 EMVALRSPGVPAERLLQVVGELSLASGAPGLVGGQVVDLECEARQVDLDTLEYIHLHKTG 188
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
LL A V+ GA+I G + + +R YAR IGL FQ++DDILDVT SS+ LGKTAGKDLA
Sbjct: 189 ALLRACVISGALIAGASEELLTALRTYARGIGLAFQIIDDILDVTASSDVLGKTAGKDLA 248
Query: 302 SGKATYPKLMGIENAKSFAGELLGQA 327
+ K TYPKL+G+E ++ A L+G+A
Sbjct: 249 ADKTTYPKLLGLEESRRRADALVGEA 274
>gi|37519985|ref|NP_923362.1| geranylgeranyl pyrophosphate synthase [Gloeobacter violaceus PCC
7421]
gi|35210977|dbj|BAC88357.1| geranylgeranyl pyrophosphate synthase [Gloeobacter violaceus PCC
7421]
Length = 295
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 152/296 (51%), Positives = 202/296 (68%), Gaps = 1/296 (0%)
Query: 59 LPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELV 118
+ F + Y+ + QV ALD + Q P K+++AMRYSLLAGGKR+RP+LC+ SC +
Sbjct: 1 MSQFDLDAYLRQCRSQVEAALDRYLPQQYPDKLYEAMRYSLLAGGKRLRPILCLTSCRMS 60
Query: 119 GGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLS 178
GG AMP ACALEM+HTMSLIHDDLP +D+D+ RR K +H+V+GE AILAGDALL+
Sbjct: 61 GGSADLAMPTACALEMVHTMSLIHDDLPAMDDDDYRRGKLTNHKVYGEDMAILAGDALLA 120
Query: 179 LALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
A + +A G P+RVV + + A GLV G+ VD+ SEG+ ++L+ LEYIH H
Sbjct: 121 YAFQLIAEKTVGAQPERVVEVLGRLGKAASGAGLVGGQVVDLESEGRTITLETLEYIHTH 180
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT LLE +V+ GA++ G + VER+ Y+RCIGL FQ+ DD+LD+T + ELGKTAGK
Sbjct: 181 KTGALLEVSVISGAILAGADGGVVERLTRYSRCIGLAFQIRDDLLDITATQAELGKTAGK 240
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
DL KATYP L+G + A+ A +L QA+ ELA F AS A PL LA +I R++
Sbjct: 241 DLRDRKATYPSLLGYDGARDRAEQLREQAVAELADFGAS-ARPLTALAEFIVQRRH 295
>gi|260434296|ref|ZP_05788266.1| geranyltranstransferase [Synechococcus sp. WH 8109]
gi|260412170|gb|EEX05466.1| geranyltranstransferase [Synechococcus sp. WH 8109]
Length = 296
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 153/293 (52%), Positives = 210/293 (71%), Gaps = 1/293 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F+ Y+ + E+V ALD ++ + P + +AMRYSLLAGGKR+RP+LC+A+CEL GG+
Sbjct: 5 FDFKAYLGKAKERVEAALDGSLGPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGE 64
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
+ A+P A ALEMIHTMSLIHDDLP +D+D+ RR +P +H+V+GE+ AILAGDALL+ A
Sbjct: 65 ATQALPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEAVAILAGDALLTRAF 124
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
E VA+ V +R+++ + E+ G GLV G+ VD+ SEGK+V L+ LEYIH+HKT
Sbjct: 125 EMVALRSPDVPAERLLKVVGELSLVAGAPGLVGGQVVDLESEGKEVDLETLEYIHLHKTG 184
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
LL A V+ GA+IGG + ++ +R YAR IGL FQ++DDILD+T SS+ LGKTAGKDL
Sbjct: 185 ALLSACVITGAIIGGADEALIKALRTYARGIGLAFQIIDDILDITASSDVLGKTAGKDLI 244
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K TYPKL+G++ ++ A L+ A E L + A KA PL LA++I SR
Sbjct: 245 ADKTTYPKLLGLDESRRRADALVNAAKEALQPW-AEKAIPLLALADFITSRDR 296
>gi|33861626|ref|NP_893187.1| polyprenyl synthetase [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
gi|33634203|emb|CAE19529.1| Polyprenyl synthetase [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 300
Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 146/290 (50%), Positives = 203/290 (70%), Gaps = 1/290 (0%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
FE+Y+ + V +ALD ++ + P + ++MRYSLLAGGKR+RP+LC+ASC L GG+ S
Sbjct: 11 FEKYLTDTKKVVEEALDFSLGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGGEPS 70
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
A+P A A+EMIHTMSLIHDDLP +DND RR +P +H+V+G++ AILAGDALL+ A E
Sbjct: 71 LAVPTAVAIEMIHTMSLIHDDLPAMDNDGFRRGRPTNHKVYGDAIAILAGDALLTRAFEM 130
Query: 184 VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
V++ GV +R++ + E+ G GLV G+ VD+ EGK+V L+ LEYIH+HKT L
Sbjct: 131 VSLRSPGVDSNRLLNVVGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEYIHLHKTGAL 190
Query: 244 LEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASG 303
L+A+V GA+I G N + + YA IGL FQ++DDILD+T SSE+LGKTAGKDL +
Sbjct: 191 LKASVRTGAMIAGANEELLNALTTYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDLLAD 250
Query: 304 KATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
K TYPKL+G+E +K A +L+ QA + + + A L LA++I +R
Sbjct: 251 KTTYPKLLGMEESKKKAFDLVDQAKKAIEPW-GLNAKYLISLADFITNRD 299
>gi|78184316|ref|YP_376751.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CC9902]
gi|78168610|gb|ABB25707.1| farnesyl-diphosphate synthase [Synechococcus sp. CC9902]
Length = 296
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 152/293 (51%), Positives = 208/293 (70%), Gaps = 1/293 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F+ Y+ + + V ALD+++ + P + AMRYSLLAGGKR+RP+LC+A+CEL GG+
Sbjct: 5 FDFKAYLGKAKDTVEAALDDSLGPERPESLRDAMRYSLLAGGKRLRPILCLAACELAGGE 64
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
A+P A ALEMIHTMSLIHDDLP +D+D+ RR +P +H+V+GE+ AILAGDALL+ A
Sbjct: 65 AKHAVPTAVALEMIHTMSLIHDDLPAMDDDDVRRGRPTNHKVYGEAVAILAGDALLTRAF 124
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
E VA+ GV +R+++ + E+ G GLV G+ VD+ SEGK V L+ LEYIH+HKT
Sbjct: 125 EMVALRSPGVPAERLLKVVGELSLVAGAPGLVGGQVVDLESEGKQVDLETLEYIHLHKTG 184
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
LL A V+ GA+IG + + +R YAR IGL FQ++DDILD+T SSE LGKTAGKDL
Sbjct: 185 ALLSACVITGALIGNADDTLITALRTYARGIGLAFQIIDDILDITASSEVLGKTAGKDLL 244
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K TYPKL+G+E ++ A +L+ +A E L + + +A PL LA++I SR
Sbjct: 245 ADKTTYPKLLGLEESRKRADDLVREAKEALQPW-SEQAMPLLALADFITSRDR 296
>gi|323455416|gb|EGB11284.1| hypothetical protein AURANDRAFT_52464 [Aureococcus anophagefferens]
Length = 352
Score = 286 bits (732), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 167/350 (47%), Positives = 220/350 (62%), Gaps = 18/350 (5%)
Query: 10 YGNSTLFRNPINDFKKSPYRAPIFRFKLFSKKIKARHAQNSVFESTDIPLPTFPFEEYMI 69
+G +T P F+ + R+P+ R L A+ SV ++ F + Y
Sbjct: 16 FGVATSLVGPAPAFRHA--RSPVVRSVL---------AEPSVASPAELA-KDFDLKAYFA 63
Query: 70 RKAEQVNKALDEAVVLQPPVK--IHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMP 127
+K V KALDE++ P I ++MRYSLLAGGKRVRP++CIA+CE+ GG E+ AMP
Sbjct: 64 QKVAAVEKALDESLTCTTPETKIIVESMRYSLLAGGKRVRPVMCIAACEMFGGTEAMAMP 123
Query: 128 AACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAV- 186
A A+EMIHTMSLIHDDLP +DND+ RR P +H ++G+ AILAGDALLS + EH AV
Sbjct: 124 TAVAIEMIHTMSLIHDDLPAMDNDDLRRGMPTNHVIYGDDVAILAGDALLSTSFEHCAVG 183
Query: 187 -NIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKD-VSLKELEYIHVHKTAKLL 244
G+ +R+V I + A+G GL G+ +D+ E K VSL+EL +IH HKTAKLL
Sbjct: 184 STAEGIPAERIVETIRRLGEAVGAVGLAGGQVMDLECEAKSGVSLEELTWIHTHKTAKLL 243
Query: 245 EAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGK 304
E +V GAV+ G +V + YA IG+ FQV DDILDVT +SE LGKTAGKD + K
Sbjct: 244 EVSVAAGAVLAGAAKDDVRQCETYANDIGIAFQVADDILDVTATSEMLGKTAGKDEDTDK 303
Query: 305 ATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
TYPKLMG++ A++ A L +AI+ LA + KA PL +A YI RQN
Sbjct: 304 TTYPKLMGLDGARAEADRLYSEAIDSLAPY-GEKAVPLIAIAKYIVERQN 352
>gi|254423009|ref|ZP_05036727.1| polyprenyl synthetase superfamily [Synechococcus sp. PCC 7335]
gi|196190498|gb|EDX85462.1| polyprenyl synthetase superfamily [Synechococcus sp. PCC 7335]
Length = 307
Score = 284 bits (726), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 149/306 (48%), Positives = 215/306 (70%), Gaps = 6/306 (1%)
Query: 54 STDIPLP-TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCI 112
+T++ P TF + Y+ ++ QV A+D A+ + P +I++AMRYSLLAGGKR+RP+LC+
Sbjct: 3 TTNLDSPSTFDLKSYLSDRSCQVEAAIDAALPVVYPEQIYEAMRYSLLAGGKRLRPILCL 62
Query: 113 ASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILA 172
A+CE++G + AMP ACALEM+HTMSLIHDDLP +D+D+ RR K +H+V+GE A+LA
Sbjct: 63 ATCEMLGASANIAMPTACALEMVHTMSLIHDDLPAMDDDDYRRGKLTNHKVYGEGVAVLA 122
Query: 173 GDALLSLALEHVAVNIA----GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVS 228
GDALL+ A EH+A G P +++ +A++ A+G EGLV G+ VD+ASEG V
Sbjct: 123 GDALLTYAFEHIATQTPQGSDGADPQHILKVVAQLGRAVGAEGLVGGQVVDLASEGTLVD 182
Query: 229 LKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKS 288
+ L +IH+HKTA LLE +V GA++ G + V+R+R YA+ IGL FQ+VDD+LD+T +
Sbjct: 183 EETLTFIHMHKTAALLEVSVTSGAMLAGASEAVVDRLRRYAQRIGLAFQIVDDVLDITST 242
Query: 289 SEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANY 348
E LGK+ GKD+A+ KATYP L G+E ++ A +L+ AI EL+ F A PL +A +
Sbjct: 243 PETLGKSIGKDIAAQKATYPSLWGLEESQRKAEQLVADAISELSEF-GEGAQPLVAIAQF 301
Query: 349 IASRQN 354
I +R +
Sbjct: 302 ITARTH 307
>gi|374639389|gb|AEZ55683.1| geranylgeranyl diphosphate synthase 3 [Salvia miltiorrhiza]
Length = 379
Score = 281 bits (719), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 169/293 (57%), Positives = 221/293 (75%), Gaps = 2/293 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F+ YM+ K VN ALD A+ L+ P K+H+AMRYSLL+GGKRV P++C+A+C LVGG+
Sbjct: 85 FDFKAYMLEKIAAVNAALDAALPLRHPAKLHEAMRYSLLSGGKRVCPIVCLAACRLVGGE 144
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
++ AMP+ACALEMIH MSLIHDDLP +D+D+ RR +P++H+VFGE A+LAG AL++ A
Sbjct: 145 DAAAMPSACALEMIHAMSLIHDDLPCMDDDDLRRGRPSNHKVFGEPAAVLAGYALIASAF 204
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIAS--EGKDVSLKELEYIHVHK 239
EH+A GV +R +R I E+ +G EG+VAG+ VD+ S G DV L++LEYIHVHK
Sbjct: 205 EHIATATEGVPAERTLRVIGEVARLIGAEGVVAGQVVDLRSGGGGDDVGLEKLEYIHVHK 264
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
TA +EAA V GAV+GG E+ VR YAR GL+FQVVDD+LDVTKS+EELGKTAGKD
Sbjct: 265 TAAAVEAAAVAGAVLGGACEEEIGNVRIYARRAGLMFQVVDDVLDVTKSTEELGKTAGKD 324
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
+A+GKATYPKL+G+E ++ A L +A E+L FE +AAPL L ++IA R
Sbjct: 325 VATGKATYPKLIGVEKSREVAENLKREAQEQLLGFERGRAAPLMALLDFIAYR 377
>gi|322418643|ref|YP_004197866.1| poluprenyl synthetase [Geobacter sp. M18]
gi|320125030|gb|ADW12590.1| Polyprenyl synthetase [Geobacter sp. M18]
Length = 295
Score = 280 bits (716), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 147/294 (50%), Positives = 200/294 (68%), Gaps = 4/294 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAVV--LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
+EY+ +K + V++AL+ + + P +H AMRYS+ AGGKRVRP+L +A+CE VGG
Sbjct: 3 LKEYLKQKCQLVDQALERYLPDGKELPASLHGAMRYSVFAGGKRVRPVLMLAACEAVGGS 62
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
MPAACA+EMIHT SLIHDDLP +DND+ RR P +H+V+GE+TAILAGDALL+ A
Sbjct: 63 PQAVMPAACAMEMIHTYSLIHDDLPAMDNDDFRRGNPTNHKVYGEATAILAGDALLTEAF 122
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKT 240
++ N G P +R I E+ A G G+V G+ VD+ SEG+ DV L L YIH HKT
Sbjct: 123 ILLSANGEGGDPAARLRVIQEIAVASGSRGMVGGQVVDMESEGRHDVDLATLSYIHTHKT 182
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
L+ A+V GA++GG + + + + YA IGL FQ+ DDILDV ++EELGK AG D
Sbjct: 183 GALIRASVRSGAIMGGASEEQFKALTRYADAIGLAFQIADDILDVEGTTEELGKDAGSDQ 242
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A GKATYP LMG+E +K+ A EL+ A++ L F+ +A PL +A+YI R++
Sbjct: 243 ARGKATYPALMGLEASKARARELVQIALDALEPFDL-RAEPLRAIASYIVKRKS 295
>gi|126659033|ref|ZP_01730174.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. CCY0110]
gi|126619690|gb|EAZ90418.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. CCY0110]
Length = 309
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 150/294 (51%), Positives = 204/294 (69%), Gaps = 2/294 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F Y+ K + V ALD+++ + P KI++AMRYSLLAGGKR+RP+LC+ +CEL+GG
Sbjct: 17 FDLASYLKDKKQLVEAALDQSLPIIRPEKIYEAMRYSLLAGGKRLRPILCLTTCELMGGT 76
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
++P ACALEMIHTMSLIHDDLP +D+D+ RR K +H+V+GE AILAGDALLS A
Sbjct: 77 VEMSLPTACALEMIHTMSLIHDDLPAMDDDDYRRGKLTNHKVYGEDIAILAGDALLSYAF 136
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKT 240
E+VA V ++ IA + +G GLV G+ +D+ SEGK DV++ L++IH+HKT
Sbjct: 137 EYVATQTRNVDLANLMNVIARLGRTVGAAGLVGGQVLDLESEGKLDVTVDTLKFIHIHKT 196
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
LLE +VV GA++ G +VER+ YA+ IGL FQ++DDILDVT S+EELGKTAGKD
Sbjct: 197 GALLETSVVSGAILAGAKQEDVERLSRYAQNIGLAFQIIDDILDVTASTEELGKTAGKDQ 256
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
KATYP L G+E ++ A L+ AI ++ + S A PL +A +I +R+N
Sbjct: 257 RDKKATYPSLWGLEESQKQAQALIDDAIAQVDPYGQS-AQPLKAIAQFIVARKN 309
>gi|343469128|gb|AEM43805.1| geranylgeranyl diphosphate synthase [Castanea mollissima]
Length = 213
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 138/210 (65%), Positives = 169/210 (80%), Gaps = 1/210 (0%)
Query: 134 MIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSP 193
MIHTMSLIHDDLP +DND+ RR KP +H+VFGE A+LAGDALL+ A EH+AV+ GV P
Sbjct: 1 MIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAVSTVGVPP 60
Query: 194 DRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVHKTAKLLEAAVVCGA 252
RV+ A+ E+ ++G EGLVAG+ VDI SEG DV L+ LE+IH+HKTA LLEAAVV GA
Sbjct: 61 ARVIGAVGELARSIGTEGLVAGQVVDICSEGLSDVGLEHLEFIHLHKTAALLEAAVVLGA 120
Query: 253 VIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMG 312
++GGG+ EVE++RN+AR IGLLFQVVDDILDVTKSS+ELGKTAGKDL + K TYPKLMG
Sbjct: 121 ILGGGSHEEVEKLRNFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKTTYPKLMG 180
Query: 313 IENAKSFAGELLGQAIEELAYFEASKAAPL 342
IE +K FA +L A ++L+ F+ KAAPL
Sbjct: 181 IEKSKEFADKLNKDAQDQLSGFDPEKAAPL 210
>gi|77176929|gb|ABA64563.1| geranylgeranyl pyrophosphate synthase [Carica papaya]
Length = 214
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 139/214 (64%), Positives = 167/214 (78%), Gaps = 1/214 (0%)
Query: 133 EMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVS 192
EM+HTMSLIHDDLP +DND+ RR KP +H+VFGE A+LAGDALLS + EH+AV GV
Sbjct: 1 EMMHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFSFEHLAVATVGVD 60
Query: 193 PDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVHKTAKLLEAAVVCG 251
P R+VRAI E+ ++G EGLVAG+ VDI SEG DV L+ LE+IHVHKTA LLEAAVV G
Sbjct: 61 PSRIVRAIKELAKSIGTEGLVAGQVVDICSEGMTDVGLEHLEFIHVHKTAALLEAAVVLG 120
Query: 252 AVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLM 311
A++GGG E+E++R +AR IGLLFQVVDDILDVTKSS+ELGKTAGKDL + K TYPKLM
Sbjct: 121 AILGGGTDEEIEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVAEKVTYPKLM 180
Query: 312 GIENAKSFAGELLGQAIEELAYFEASKAAPLYFL 345
GIE ++ A +L A E+L F+ KAAPL L
Sbjct: 181 GIEKSRELAEKLNKDAQEQLRDFDEEKAAPLMAL 214
>gi|197117645|ref|YP_002138072.1| trans-isoprenyl diphosphate synthase [Geobacter bemidjiensis Bem]
gi|197087005|gb|ACH38276.1| trans-isoprenyl diphosphate synthase [Geobacter bemidjiensis Bem]
Length = 295
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 144/294 (48%), Positives = 201/294 (68%), Gaps = 4/294 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAVV--LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
++Y+ +K E V++AL+ + + P +H +MRYS+ AGGKRVRP+L +A+CE VGG+
Sbjct: 3 LKQYLKQKCELVDQALERFLPHGKELPASLHGSMRYSVFAGGKRVRPVLLLAACEAVGGE 62
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
+ A+PAACA+EMIHT SLIHDDLP +DND+ RR P +H+V+GE+TAILAGDALL+ A
Sbjct: 63 LNSALPAACAMEMIHTYSLIHDDLPAMDNDDFRRGNPTNHKVYGEATAILAGDALLTEAF 122
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKT 240
++ N G+ P +R I E+ A G G+V G+ VD+ SEGK D+ + L YIH HKT
Sbjct: 123 ILLSCNGEGMEPGARLRVIHEIAHASGSRGMVGGQMVDMESEGKHDIDMATLSYIHTHKT 182
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
L+ A+V GA++GG N + + YA IGL FQ+ DD+LDV ++EELGK AG D
Sbjct: 183 GALIRASVRAGAILGGANEETFDALTRYADAIGLAFQIADDVLDVEGTTEELGKDAGSDQ 242
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A GKATYP L+G+E +K A EL+ A+ L F+ +A PL +A+YI R++
Sbjct: 243 ARGKATYPALVGLEASKRRAEELVQIALNALEPFD-ERAEPLRAIASYIVKRKS 295
>gi|452824591|gb|EME31593.1| geranylgeranyl pyrophosphate synthetase [Galdieria sulphuraria]
Length = 370
Score = 277 bits (708), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 151/290 (52%), Positives = 201/290 (69%), Gaps = 4/290 (1%)
Query: 66 EYMIRKAEQVNKALDEAVVLQPPVK--IHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
++M RK + + + L+ ++ L P I+++MRYSLLAGGKR+RP+LCIA+CEL GG
Sbjct: 80 QFMKRKKDYIEEQLNRSIPLLDPRLGLIYESMRYSLLAGGKRIRPMLCIATCELFGGSTL 139
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
A P A ALEMIHTMSLIHDDLP +DND+ RR K +H+VFGE AILAGDALL+ A E+
Sbjct: 140 TATPTAVALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDALLARAFEY 199
Query: 184 VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVHKTAK 242
+A GV + V++ I+ + +++G G+V G+ VDI SEG K+VS+ +L +IH HKT
Sbjct: 200 IANETQGVPAEVVLKVISFLGASVGYSGIVGGQVVDILSEGKKEVSIDDLIWIHKHKTGA 259
Query: 243 LLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
LL+ VV GA++GG +V RV +A IGL FQV DDILDVT S EELGK+ GKD S
Sbjct: 260 LLKCCVVTGALLGGAKEEDVIRVGEFAERIGLAFQVADDILDVTASFEELGKSIGKDERS 319
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
KAT+P+LMG+E +K FA +L+ Q + L +A L LA+YI SR
Sbjct: 320 DKATFPRLMGLEESKRFAEKLV-QESKYLIEPYGKRAYYLEALADYIVSR 368
>gi|375332057|gb|AFA52568.1| farnesyltransferase [Vaucheria litorea]
Length = 349
Score = 276 bits (707), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 157/338 (46%), Positives = 214/338 (63%), Gaps = 16/338 (4%)
Query: 23 FKKSPYRAPIFRFKLFSKKIKARHAQNSVFESTDIPLPTFPFEEYMIRKAEQVNKALDEA 82
F +P + I R +K I + + ST TF ++Y+ K V+KAL E
Sbjct: 22 FPGTPSKGTI-RSAPLTKSISLKQSVAPATSST-----TFDIKKYLYEKKVIVDKALSEC 75
Query: 83 VVLQPPV-----KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHT 137
+V P+ K+ ++M YSLLAGGKRVRP+LCIAS E+ GG+ +P A ALEMIH+
Sbjct: 76 IV---PIGAENEKLCESMNYSLLAGGKRVRPILCIASSEIFGGEIESTLPTALALEMIHS 132
Query: 138 MSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVV 197
MSL+HDDLP +DND+ RR KP +H V+GE+ AILAGDALLS + E VA + GV +RVV
Sbjct: 133 MSLVHDDLPAMDNDDLRRGKPTNHVVYGEALAILAGDALLSKSFEIVAKHTKGVDAERVV 192
Query: 198 RAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKTAKLLEAAVVCGAVIGG 256
+A + +G GL G+ +D+ EGK D +L++L +IH HKT LL+AA GAV+GG
Sbjct: 193 DVLARLGECVGEVGLAGGQAMDLELEGKEDTTLEQLRWIHKHKTGALLKAACTTGAVLGG 252
Query: 257 GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENA 316
EVE + ++ IGL FQV DDILD T++SE+LGKTAGKD A K TY KL+G++ A
Sbjct: 253 AEPSEVEAIERFSESIGLAFQVADDILDCTQTSEQLGKTAGKDEAVSKTTYVKLLGMDGA 312
Query: 317 KSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ A L+ A+ L F S+A L +A++I R+N
Sbjct: 313 RKEAKRLVDDALAALEPF-GSRAEALKAIAHFIIEREN 349
>gi|302142446|emb|CBI19649.3| unnamed protein product [Vitis vinifera]
Length = 301
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 151/295 (51%), Positives = 190/295 (64%), Gaps = 61/295 (20%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
TF F++YMI+KA V+KALDEAV ++ P+KIH+AMRYSLLAGGKR
Sbjct: 67 TFNFKDYMIQKASSVHKALDEAVYVKSPIKIHEAMRYSLLAGGKR--------------- 111
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
S AMPAACA+EMIHTMSLIHDDLP +DND+ RR KP +H+VFGE A+LAGD+LL+ A
Sbjct: 112 --SNAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDSLLAFA 169
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHK 239
EH+A +GVS R+V A+ E+ ++G EGLVAG+ VDI+S G+ DV L +LE+IH+HK
Sbjct: 170 FEHLATATSGVSSSRIVAAVGELAKSIGAEGLVAGQVVDISSTGQSDVGLDQLEFIHIHK 229
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
TA LLEAAVV GA++GGG S EE
Sbjct: 230 TAALLEAAVVLGALLGGG------------------------------SDEE-------- 251
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
ATYPKLMG+E ++ FA L +A E+L+ F+ KAAPL LA+YIA RQN
Sbjct: 252 -----ATYPKLMGLEKSREFAENLNKEAKEQLSGFDLEKAAPLIALADYIAYRQN 301
>gi|46310089|gb|AAS87323.1| geranylgeranyl pyrophosphate synthetase [Taxus wallichiana var.
chinensis]
Length = 207
Score = 274 bits (700), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 133/207 (64%), Positives = 161/207 (77%), Gaps = 2/207 (0%)
Query: 130 CALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIA 189
CA+EMIHTMSLIHDDLP +DND+ RR KP +H+VFGE TA+LAGDALLS A EH+AV +
Sbjct: 1 CAMEMIHTMSLIHDDLPRMDNDDFRRGKPTNHKVFGEDTAVLAGDALLSFAFEHIAVATS 60
Query: 190 GVSP-DRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKTAKLLEAA 247
P DR +R I+E+ +G +GLV G+ VDI SEG +V LK LE+IH+HKTA LLE +
Sbjct: 61 KTVPSDRTLRVISELGKTIGSQGLVGGQVVDITSEGDANVDLKTLEWIHIHKTAVLLECS 120
Query: 248 VVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATY 307
VV G ++GG E+ R+R YARC+GLLFQV+DDILDVTKSSEELGKTAGKDL + KATY
Sbjct: 121 VVSGGILGGATEDEIARIRRYARCVGLLFQVMDDILDVTKSSEELGKTAGKDLLTDKATY 180
Query: 308 PKLMGIENAKSFAGELLGQAIEELAYF 334
PKLMG+E AK FA EL +A E L+ F
Sbjct: 181 PKLMGLEKAKEFAAELATKAXEXLSSF 207
>gi|262411038|gb|ACY66885.1| geranyl geranyl pyrophosphate synthase [Linum usitatissimum]
Length = 215
Score = 273 bits (698), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 134/215 (62%), Positives = 171/215 (79%), Gaps = 1/215 (0%)
Query: 135 IHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPD 194
IHTMSLIHDDLP +DND+ RR KP +H+VFGE A+LAGDALL+ A EH+AV+ GV
Sbjct: 1 IHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHMAVSTVGVPAA 60
Query: 195 RVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVHKTAKLLEAAVVCGAV 253
++VRAI E+ ++G EGLVAG+ VDI SEG +V L++LE+IH+HKT LLEA+VV GA+
Sbjct: 61 KIVRAIGELAKSIGSEGLVAGQVVDIDSEGLANVGLEQLEFIHLHKTGALLEASVVLGAI 120
Query: 254 IGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGI 313
+GGG EVE++R++ARCIGLLFQVV DILDVTKSS+ELGKTAGKDL + K TYP+LMGI
Sbjct: 121 LGGGTDEEVEKLRSFARCIGLLFQVVGDILDVTKSSQELGKTAGKDLVADKVTYPRLMGI 180
Query: 314 ENAKSFAGELLGQAIEELAYFEASKAAPLYFLANY 348
+ ++ FA +L +A + L+ F+ KAAPL LANY
Sbjct: 181 DKSREFAEQLNTEAKQHLSGFDPIKAAPLIALANY 215
>gi|253701624|ref|YP_003022813.1| polyprenyl synthetase [Geobacter sp. M21]
gi|251776474|gb|ACT19055.1| Polyprenyl synthetase [Geobacter sp. M21]
Length = 295
Score = 273 bits (698), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 143/294 (48%), Positives = 199/294 (67%), Gaps = 4/294 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAVV--LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
++Y+ +K E V+++L+ + + P +H +MRYS+ AGGKRVRP+L +A+CE VGG
Sbjct: 3 LKQYLKQKCELVDQSLERFLPHGKELPASLHGSMRYSVFAGGKRVRPVLLLAACEAVGGA 62
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
A+PAACA+EMIHT SLIHDDLP +DND+ RR P +H+V+GE+TAILAGDALL+ A
Sbjct: 63 LKPALPAACAMEMIHTYSLIHDDLPAMDNDDFRRGNPTNHKVYGEATAILAGDALLTEAF 122
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKT 240
++ N GV P +R I E+ A G G+V G+ VD+ SEGK D+ + L YIH HKT
Sbjct: 123 ILLSGNGEGVDPAARLRVIHEIAHASGSRGMVGGQMVDMESEGKHDIDMATLSYIHTHKT 182
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
L+ A+V GA++GG + + + YA IGL FQ+ DD+LDV ++EELGK AG D
Sbjct: 183 GALIRASVRAGAILGGADEEAFDALTRYADAIGLAFQIADDVLDVEGTTEELGKDAGSDQ 242
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A GKATYP L+G+E +K A EL+ A+ L F+ +A PL +A+YI R++
Sbjct: 243 ARGKATYPALVGLEASKRRAEELVQIALTALEPFD-ERAEPLRAIASYIVKRKS 295
>gi|357127831|ref|XP_003565581.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Brachypodium distachyon]
Length = 383
Score = 270 bits (691), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 165/312 (52%), Positives = 224/312 (71%), Gaps = 21/312 (6%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIH---------KAMRYSLLAGGKRVRPLLCI 112
F FE+Y+ A+ V++ALD A+ L P ++ ++MRYS+L+GGKRVRP+L I
Sbjct: 74 FDFEQYLTAHAKSVHEALDRALAL--PARLEHEPDHHWLIESMRYSVLSGGKRVRPVLAI 131
Query: 113 ASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILA 172
A+CE VGGD + A P ACA+EM+H MSL+HD++P +D+D RR +P+ H FGE A+LA
Sbjct: 132 AACEFVGGDAAAAAPVACAVEMVHAMSLVHDEMPCMDDDALRRGRPSCHAAFGEHAALLA 191
Query: 173 GDALLSLALEHVAVNIAG----VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKD-- 226
GDALL+LA EH+A+ A V +R +R++AE+ +A G+ G+ AG+ D A EG+
Sbjct: 192 GDALLALAFEHLALGYADAGIVVPAERALRSVAEIANAAGIGGVAAGQLADKACEGRGSR 251
Query: 227 ---VSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDIL 283
VSL LE++HVHKTA+LLEAA V GA++GGG EVERVR YAR +GLLFQVVDD+L
Sbjct: 252 VGVVSLATLEHVHVHKTARLLEAAAVSGAIVGGGTGAEVERVRRYARRVGLLFQVVDDVL 311
Query: 284 DVTKSSEELGKTAGKDLASGKATYPKLM-GIENAKSFAGELLGQAIEELAYFEASKAAPL 342
DVT++S ELGKTAGKDL + K+TYPKL+ G++ A+++A ELL A EL +A +AAPL
Sbjct: 312 DVTRTSVELGKTAGKDLVADKSTYPKLLGGVDKARAYADELLAMAEAELEGVDARRAAPL 371
Query: 343 YFLANYIASRQN 354
LA ++A RQN
Sbjct: 372 RQLARFVAYRQN 383
>gi|308081287|ref|NP_001183931.1| putative geranylgeranyl pyrophosphate synthase 3 [Zea mays]
gi|148535923|gb|ABQ85648.1| putative geranylgeranyl pyrophosphate synthase 3 [Zea mays]
gi|413947066|gb|AFW79715.1| putative geranylgeranyl pyrophosphate synthase 3 [Zea mays]
Length = 363
Score = 270 bits (690), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 174/300 (58%), Positives = 225/300 (75%), Gaps = 6/300 (2%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVV-LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
+F FE Y+ KA V+ ALD + L+ P + ++MRYS+LAGGKR+RP+L IA+CELVG
Sbjct: 64 SFDFESYLSAKARAVHDALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVLAIAACELVG 123
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
G + A+P ACA+EMIHT SLIHDD+P +D+D RR +P++H FGE TA+LAGDALL+L
Sbjct: 124 GTAAAAVPVACAVEMIHTASLIHDDMPCMDDDALRRGRPSNHVAFGEPTALLAGDALLAL 183
Query: 180 ALEHVAVNIAG--VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK---DVSLKELEY 234
A EHVA AG V DR +RA+ E+ S GV G+ AG+ D+ASEG VSL LEY
Sbjct: 184 AFEHVARGSAGAGVPADRALRAVVELGSVAGVGGIAAGQVADMASEGAPSGSVSLGALEY 243
Query: 235 IHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGK 294
IHVHKTA+L+EAA V GAV+GGG EVERVR YA +GLL QVVDD+LDVT +SE+LGK
Sbjct: 244 IHVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLGQVVDDVLDVTGTSEQLGK 303
Query: 295 TAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
TAGKD+A+GKATYP+LMG++ A+++ GELL +A EL +A++ APL LA ++A RQ+
Sbjct: 304 TAGKDVAAGKATYPRLMGLKGARAYMGELLAKAEAELDGLDAARTAPLRHLARFMAHRQH 363
>gi|12862619|dbj|BAB32548.1| putative GGPP synthase [Lactuca indica var. laciniata]
Length = 205
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 159/205 (77%)
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGV 209
ND+ RR KP +H V+GE A+LAGDALLS + EH+ GVS DR++RAI E+ +G
Sbjct: 1 NDDFRRGKPTNHIVYGEDVAVLAGDALLSFSFEHITTATKGVSSDRILRAIGELAKCIGS 60
Query: 210 EGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYA 269
EGLVAG+ VD+ SEG DV L LE+IH+HKTA LLE +VV GA++GGG+ E+E++R +A
Sbjct: 61 EGLVAGQVVDVCSEGADVGLDHLEFIHLHKTAALLEGSVVLGAIMGGGSDEEIEKLRKFA 120
Query: 270 RCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIE 329
R IGLLFQVVDDILDVTKSSEELGKTAGKDL +GK TYPKL+GIE ++ FA +L +A E
Sbjct: 121 RSIGLLFQVVDDILDVTKSSEELGKTAGKDLVAGKTTYPKLLGIEKSREFAEKLNKEAQE 180
Query: 330 ELAYFEASKAAPLYFLANYIASRQN 354
+L+ F+ KAAPL LANYIA R+N
Sbjct: 181 QLSEFDQRKAAPLIALANYIAYREN 205
>gi|125569734|gb|EAZ11249.1| hypothetical protein OsJ_01102 [Oryza sativa Japonica Group]
Length = 219
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 132/219 (60%), Positives = 165/219 (75%), Gaps = 2/219 (0%)
Query: 138 MSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIA--GVSPDR 195
MSLIHDD+P +D+D RR +P++H FGE TA+LAGDAL +LA EHVA GV DR
Sbjct: 1 MSLIHDDMPCMDDDALRRGRPSNHVAFGEFTALLAGDALHALAFEHVARGCGDHGVPADR 60
Query: 196 VVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIG 255
+RA+AE+ SA G G+ AG+ D SEG VSL LEYIHVHKTA+LLEAA V GA++G
Sbjct: 61 TLRAVAELGSASGTGGVAAGQVADKESEGLPVSLAMLEYIHVHKTARLLEAAAVSGAIVG 120
Query: 256 GGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIEN 315
GG EVERVR YARC+GLLFQVVDD+LD+T +SE+LGKTAGKD+ + KATYPKL+G++
Sbjct: 121 GGADAEVERVRRYARCVGLLFQVVDDVLDMTSTSEQLGKTAGKDVEADKATYPKLLGVDK 180
Query: 316 AKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A+ +A +LL A EL F+A +AAPL LA +IA RQ+
Sbjct: 181 AREYAADLLAMAEAELDGFDAERAAPLRHLARFIAYRQH 219
>gi|449017049|dbj|BAM80451.1| geranylgeranyl diphosphate synthase, chloroplast precursor
[Cyanidioschyzon merolae strain 10D]
Length = 388
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 133/294 (45%), Positives = 203/294 (69%), Gaps = 8/294 (2%)
Query: 66 EYMIRKAEQVNKALDEAVVLQPPV--KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
E+++ K ++ AL++AV + ++ +AMRYSLLAGGKRVRP L +A+C + GG +
Sbjct: 94 EFLLAKRASIDAALNDAVQATSVMNARLAEAMRYSLLAGGKRVRPALVLAACRMFGGVDE 153
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
AMP A A+EM+HTMSLIHDDLP +DND+ RR +P +H+V+GE AILAGDALLS A
Sbjct: 154 QAMPTAVAVEMVHTMSLIHDDLPAMDNDDFRRGRPTNHKVYGEEVAILAGDALLSEAFSQ 213
Query: 184 VAVNIAG--VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK---DVSLKELEYIHVH 238
+A V P R + I + + +G+ GL AG+ +D+ +EGK ++SL+ LE IH++
Sbjct: 214 IAEKTPATLVPPSRTLEVIRRLGNCVGLHGLAAGQALDLEAEGKPADEISLRMLETIHLY 273
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KTA LL ++ GA++ G + +++ + ++A IGL FQV DD+LDVT ++E LGKTAGK
Sbjct: 274 KTAALLRFSITAGAILAGASVDDIDCMESFANKIGLAFQVADDVLDVTATTETLGKTAGK 333
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
D+A+ KAT+P+++G+E ++ +A +L+ +A ELA + +A+ L A++I R
Sbjct: 334 DVAAEKATFPRILGLEESRKYAEDLVKEAKGELAKY-GDRASLLLGFADFIIQR 386
>gi|296133204|ref|YP_003640451.1| polyprenyl synthetase [Thermincola potens JR]
gi|296031782|gb|ADG82550.1| Polyprenyl synthetase [Thermincola potens JR]
Length = 299
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 128/269 (47%), Positives = 180/269 (66%), Gaps = 3/269 (1%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPF 147
P IH++MRYS+LAGGKR+RP+L +A+ E VGGD +PAACA+EMIHT SLIHDDLP
Sbjct: 32 PETIHQSMRYSMLAGGKRLRPVLVLAAAEAVGGDVKKVIPAACAIEMIHTYSLIHDDLPA 91
Query: 148 LDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVA--VNIAGVSPDRVVRAIAEMCS 205
+D+D RR KP +H V+GE+ AILAGDALL+LA E ++ V G+ P +V+R I E+
Sbjct: 92 MDDDNYRRGKPTNHVVYGEAIAILAGDALLTLAFEVLSSLVEEPGIDPQKVLRVIKEISL 151
Query: 206 AMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERV 265
A G GL+ G+ VDI SE D+S + L+YIH+HKT L +AA+ GA++ + ++ +
Sbjct: 152 AAGSRGLIGGQVVDIGSENLDISAETLKYIHIHKTGALFKAALKTGAILSSASEEQITAL 211
Query: 266 RNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLG 325
YA +GL FQ+ DDILD+ +E+LGK G D+ KATYP + G++ AK A E +
Sbjct: 212 SRYAHFLGLGFQITDDILDIEGDTEKLGKPVGSDIKKKKATYPSIFGLQEAKQMAREAVA 271
Query: 326 QAIEELAYFEASKAAPLYFLANYIASRQN 354
+++ L F+ +A L +A Y+ R N
Sbjct: 272 ESLMSLEGFD-ERADFLREMARYLLERDN 299
>gi|304316765|ref|YP_003851910.1| polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|302778267|gb|ADL68826.1| Polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 293
Score = 257 bits (657), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 131/295 (44%), Positives = 194/295 (65%), Gaps = 7/295 (2%)
Query: 64 FEEYMIRKAEQVNKALDEAV-VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
F++ ++ K E +N L++ + + P ++ AMRYS+ AGGKR+RP+LCI+SCELVGGD
Sbjct: 2 FDDILMEKIEYINNGLNKLLDIDDKPEILYDAMRYSVFAGGKRLRPVLCISSCELVGGDR 61
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
A+P ACA+E IHT SLIHDDLP +DND+ RR KP +H+V+GE+ AILAGDALL+ E
Sbjct: 62 DDALPVACAIEFIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEALAILAGDALLNYGFE 121
Query: 183 ---HVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
H A++ A ++RA E+ A G G++ G+ VD+ SE K+++ +EL+++H HK
Sbjct: 122 VLIHHALDSANCQ--NILRATEEIAHAAGCHGMIGGQVVDLLSENKNITEEELKFMHDHK 179
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T L++A+VV GA++GG + ++++ +YA IGL FQ+ DDILDV +LGK D
Sbjct: 180 TGALIKASVVAGAIMGGADDETIKKLSDYAEYIGLAFQIKDDILDVLGDESKLGKNVKSD 239
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L +GK+T+ + G++ + S EL AI L F K+ L L Y+A R +
Sbjct: 240 LENGKSTFVSVFGLQRSISLVKELTASAIRILDDF-GEKSEFLKSLTKYMADRDS 293
>gi|433654909|ref|YP_007298617.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293098|gb|AGB18920.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 293
Score = 257 bits (656), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 131/295 (44%), Positives = 194/295 (65%), Gaps = 7/295 (2%)
Query: 64 FEEYMIRKAEQVNKALDEAV-VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
F++ ++ K E +N L++ + + P ++ AMRYS+ AGGKR+RP+LCI+SCELVGGD
Sbjct: 2 FDDILMEKIEYINNGLNKLLDIDDKPEILYDAMRYSVFAGGKRLRPVLCISSCELVGGDR 61
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
A+P ACA+E IHT SLIHDDLP +DND+ RR KP +H+V+GE+ AILAGDALL+ E
Sbjct: 62 DDALPVACAIEFIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEALAILAGDALLNYGFE 121
Query: 183 ---HVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
H A++ A ++RAI E+ A G G++ G+ VD+ SE K+++ +EL+++H HK
Sbjct: 122 VLIHHALDSANCQ--NILRAIEEIAHAAGCHGMIGGQVVDLLSENKNITEEELKFMHDHK 179
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T L++A+VV GA++GG + ++++ +YA IGL FQ+ DDILDV +LGK D
Sbjct: 180 TGALIKASVVAGAIMGGADDETIKKLSDYAEYIGLAFQIKDDILDVLGDESKLGKNVKSD 239
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+GK+T+ + G++ + S EL AI L F K+ L L Y+A R +
Sbjct: 240 SENGKSTFVSVFGLQRSISLVKELTASAIRILDDF-GEKSEFLKSLTKYMADRDS 293
>gi|167037514|ref|YP_001665092.1| polyprenyl synthetase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|320115928|ref|YP_004186087.1| polyprenyl synthetase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|326390206|ref|ZP_08211767.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200]
gi|392941055|ref|ZP_10306699.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
siderophilus SR4]
gi|166856348|gb|ABY94756.1| Polyprenyl synthetase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|319929019|gb|ADV79704.1| Polyprenyl synthetase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|325993854|gb|EGD52285.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200]
gi|392292805|gb|EIW01249.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
siderophilus SR4]
Length = 294
Score = 256 bits (655), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 136/295 (46%), Positives = 192/295 (65%), Gaps = 6/295 (2%)
Query: 64 FEEYMIRKAEQVNKALDEAV-VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
F+E + K + V K L + + + P I++AMRYS+ AGGKR+RP+LC++SCEL+GGD
Sbjct: 2 FKEKLREKQQLVEKELHRILDIDEKPEIIYEAMRYSVFAGGKRLRPVLCLSSCELLGGDI 61
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
A+P ACA+E+IHT SLIHDDLP +DND+ RR KP +H+V+GE+ AILAGD LL+L E
Sbjct: 62 KKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGLLNLGYE 121
Query: 183 HVAVNIAGVSP---DRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
V V A P +R+++A E+ +A G +G++ G+ VDI S+ +++ +EL+++H HK
Sbjct: 122 -VLVRHALEHPEDYERILKATNEIATASGCKGIIGGQVVDILSQNTELTYEELKFMHEHK 180
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T L+EA+V GA I G E+ +R YAR IG FQ+ DDILDV E+LGK G D
Sbjct: 181 TGALIEASVCAGAYIAGATEEEIHALREYARLIGFAFQIKDDILDVIGEEEKLGKKVGSD 240
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
GK T+ + G+E ++ EL AI+ L F KA L L+NY+ R N
Sbjct: 241 KEKGKFTFVNIFGLEKSQEMVVELTQNAIKILDRF-GEKAEFLKELSNYLIERVN 294
>gi|116748856|ref|YP_845543.1| polyprenyl synthetase [Syntrophobacter fumaroxidans MPOB]
gi|116697920|gb|ABK17108.1| farnesyl-diphosphate synthase [Syntrophobacter fumaroxidans MPOB]
Length = 296
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 126/294 (42%), Positives = 190/294 (64%), Gaps = 3/294 (1%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVK--IHKAMRYSLLAGGKRVRPLLCIASCELVG 119
F + Y+ + + V AL++ + ++ + +A RYSL AGGKR+RP+LC+A+ E+ G
Sbjct: 3 FDLKLYLAERKQLVEDALEDCFPVPSGLEKSVLEAARYSLFAGGKRLRPILCLAAAEVAG 62
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
G AMPAACALEMIHT SLIHDDLP +DND+ RR KP +H+VFGE+ A+LAGDALL+
Sbjct: 63 GSREAAMPAACALEMIHTYSLIHDDLPAMDNDDFRRGKPTNHKVFGEAIAVLAGDALLTE 122
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A + V+ + P +++ +A + A G G++ G+ +D+ E + V L +EY+H+HK
Sbjct: 123 AFDFVSKMDGDIPPRKILAVVATLVRASGYRGMIGGQVIDLECENRTVDLATVEYMHIHK 182
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T LL A++ GA++GGG+ +V ++ Y +GL FQ+ DD+LDV + E+GK G D
Sbjct: 183 TGALLSASLEVGALLGGGSDAQVSSLKRYGHHLGLAFQITDDLLDVEGDAREMGKKPGSD 242
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
A K TYP L+GI ++ A E + A++ LA F+ +A PL +A Y+ R+
Sbjct: 243 AAKNKKTYPALLGITRSREAAREHVDAALQALAAFD-DRAEPLRAIARYLLVRK 295
>gi|345017599|ref|YP_004819952.1| polyprenyl synthetase [Thermoanaerobacter wiegelii Rt8.B1]
gi|344032942|gb|AEM78668.1| Polyprenyl synthetase [Thermoanaerobacter wiegelii Rt8.B1]
Length = 294
Score = 254 bits (649), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 135/295 (45%), Positives = 191/295 (64%), Gaps = 6/295 (2%)
Query: 64 FEEYMIRKAEQVNKALDEAV-VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
F+E + K + V K L + + + P I++AMRYS+ AGGKR+RP+LC++SCEL+GGD
Sbjct: 2 FKEKLREKQQLVEKELHRILDIDEKPEIIYEAMRYSVFAGGKRLRPVLCLSSCELLGGDI 61
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
A+P ACA+E+IHT SLIHDDLP +DND+ RR KP +H+V+GE+ AILAGD LL+L E
Sbjct: 62 KKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGLLNLGYE 121
Query: 183 HVAVNIAGVSP---DRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
V V A P +R+++A E+ +A G +G++ G+ VDI S+ +++ +EL+++H HK
Sbjct: 122 -VLVRHALEHPEDYERILKATNEIATASGCKGIIGGQVVDILSQNTELTYEELKFMHEHK 180
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T L+EA+V GA I E+ +R YAR IG FQ+ DDILDV E+LGK G D
Sbjct: 181 TGALIEASVCAGAYIASATEEEIHALREYARLIGFAFQIKDDILDVIGEEEKLGKKVGSD 240
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
GK T+ + G+E ++ EL AI+ L F KA L L+NY+ R N
Sbjct: 241 KEKGKFTFVNIFGLEKSQEMVVELTQNAIKILDRF-GEKAEFLKELSNYLIERVN 294
>gi|167040176|ref|YP_001663161.1| polyprenyl synthetase [Thermoanaerobacter sp. X514]
gi|300914259|ref|ZP_07131575.1| Polyprenyl synthetase [Thermoanaerobacter sp. X561]
gi|307724505|ref|YP_003904256.1| polyprenyl synthetase [Thermoanaerobacter sp. X513]
gi|166854416|gb|ABY92825.1| Polyprenyl synthetase [Thermoanaerobacter sp. X514]
gi|300889194|gb|EFK84340.1| Polyprenyl synthetase [Thermoanaerobacter sp. X561]
gi|307581566|gb|ADN54965.1| Polyprenyl synthetase [Thermoanaerobacter sp. X513]
Length = 294
Score = 254 bits (648), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 136/295 (46%), Positives = 191/295 (64%), Gaps = 6/295 (2%)
Query: 64 FEEYMIRKAEQVNKALDEAV-VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
F+E + K + V K L + + + P I++AMRYS+ AGGKR+RP+LC++SCEL+GGD
Sbjct: 2 FKEKLREKQQLVEKELHRILDIEEKPEIIYEAMRYSVFAGGKRLRPVLCLSSCELLGGDI 61
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
A+P ACA+E+IHT SLIHDDLP +DND+ RR KP +H+V+GE+ AILAGD LL+L E
Sbjct: 62 KKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGLLNLGYE 121
Query: 183 HVAVNIAGVSP---DRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
V V A P +R+++A E+ +A G +G++ G+ VDI S+ ++ +EL++IH HK
Sbjct: 122 -VLVRHALEHPEDYERILKATNEIATASGCKGIIGGQVVDILSQNTKLTYEELKFIHEHK 180
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
TA L+EA+V GA I G +V +R YAR IG FQ+ DDILDV E+LGK G D
Sbjct: 181 TAALIEASVCAGAYIAGATEEDVHALREYARLIGFAFQIKDDILDVIGEEEKLGKKVGSD 240
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
GK T+ + +E ++ EL A++ L F KA L L+NY+ R N
Sbjct: 241 REKGKFTFVNIFELEKSQEMVVELTQNAVKILDRF-GEKALFLKELSNYLIERVN 294
>gi|83590356|ref|YP_430365.1| farnesyl-diphosphate synthase [Moorella thermoacetica ATCC 39073]
gi|83573270|gb|ABC19822.1| farnesyl-diphosphate synthase [Moorella thermoacetica ATCC 39073]
Length = 297
Score = 253 bits (647), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 131/298 (43%), Positives = 188/298 (63%), Gaps = 7/298 (2%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPP----VKIHKAMRYSLLAGGKRVRPLLCIASCE 116
T E Y+ + + V +AL A L PP +H+AM YSL AGGKR+RP+L +A+ E
Sbjct: 3 TTELESYLAERRQLVQEAL--ARNLPPPDTYPPAVHQAMHYSLFAGGKRLRPILVLAAGE 60
Query: 117 LVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDAL 176
VG +PAACA+E IHT SLIHDDLP +DND+ RR +P H+V+GE+ A+LAGDAL
Sbjct: 61 AVGSQPEPLLPAACAVEFIHTYSLIHDDLPAMDNDDYRRGRPTCHKVYGEAIALLAGDAL 120
Query: 177 LSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIH 236
L+LA E ++ A + P+R++RA E+ ++ G +GL+ G+ VD+ +EG+ V+L+++ YIH
Sbjct: 121 LTLAFEVLSRIPATIPPERILRATRELAASAGSQGLIGGQVVDMEAEGQPVTLEKVNYIH 180
Query: 237 VHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTA 296
HKT L+ A + G ++GG ++ + Y +GL FQ+ DDILD+T + GK
Sbjct: 181 NHKTGSLIRACLRLGGILGGAGEEQLALLTRYGEALGLAFQITDDILDITGDFSQTGKQG 240
Query: 297 GKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
G D A GKATYP +G+E ++ AGEL +A LA A PL LA ++ RQ
Sbjct: 241 GVDAARGKATYPACLGVEASRQKAGELCAEA-GALARALGPAAEPLELLAGFVLRRQG 297
>gi|20807745|ref|NP_622916.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
tengcongensis MB4]
gi|20516298|gb|AAM24520.1| Geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
tengcongensis MB4]
Length = 294
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 132/285 (46%), Positives = 192/285 (67%), Gaps = 8/285 (2%)
Query: 73 EQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACAL 132
E++++ LD V + P I++AMRYS+ AGGKR+RP+LC+++CEL+GGD A+P AC++
Sbjct: 15 EELHRILD---VQEKPEIIYEAMRYSVFAGGKRLRPVLCLSACELLGGDLKKALPVACSI 71
Query: 133 EMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVS 192
E+IHT SLIHDDLP +DND+ RR KP +H+VFGE+ AILAGD LL+L E V + A +
Sbjct: 72 ELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEAIAILAGDGLLNLGYE-VLIRHALEN 130
Query: 193 P---DRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVV 249
P +++++A E+ +A G +G++ G+ DI S+ +++ +EL+YIH HKTA L+EA+V
Sbjct: 131 PEDYEKILKAANEIATASGCKGIIGGQVEDILSQNTELTYEELKYIHEHKTAALIEASVC 190
Query: 250 CGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPK 309
GA + G + EVE +R YA IGL FQ+ DDILDV + LGK G D GK T+
Sbjct: 191 AGAHMAGASEKEVELLREYAGLIGLAFQIKDDILDVIGDEKTLGKKVGSDREKGKFTFVN 250
Query: 310 LMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ G+E ++ EL +AI+ L F +A L L+NY+ R N
Sbjct: 251 IFGVEKSQEMVKELTDEAIKILDTF-GERAQFLKDLSNYLIERVN 294
>gi|307105633|gb|EFN53881.1| hypothetical protein CHLNCDRAFT_31906 [Chlorella variabilis]
Length = 304
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 138/295 (46%), Positives = 183/295 (62%), Gaps = 53/295 (17%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F F++YM +A ++ ALD++V LQ P I+++MRYSLLAG
Sbjct: 61 FDFQQYMKERATLIDAALDKSVPLQYPEIINESMRYSLLAG------------------- 101
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
RR KP +H+V+GE AILAGDALLSL+
Sbjct: 102 --------------------------------RRGKPTNHKVYGEEIAILAGDALLSLSF 129
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG--KDVSLKELEYIHVHK 239
E++A GV+ DRV++ I E+ A+G EGLVAG+ VDI SEG + V L L+YIH HK
Sbjct: 130 EYIARETRGVAADRVLQVIVEVGKAVGSEGLVAGQAVDIKSEGAGESVGLDTLQYIHEHK 189
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
TA LLEAAVV GA++GG ++V+R+R Y+R IGL FQVVDDILD+T ++EELGKTAGKD
Sbjct: 190 TAVLLEAAVVSGAILGGATEVDVDRLRKYSRSIGLAFQVVDDILDITATTEELGKTAGKD 249
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
LAS K TYP L+G+E ++ A EL+ +A L ++ ++AAPLY LA YI R+N
Sbjct: 250 LASAKTTYPSLVGLERSREIADELIEEAKSMLTTYDPARAAPLYALAEYIRCRKN 304
>gi|302773810|ref|XP_002970322.1| hypothetical protein SELMODRAFT_231604 [Selaginella moellendorffii]
gi|300161838|gb|EFJ28452.1| hypothetical protein SELMODRAFT_231604 [Selaginella moellendorffii]
Length = 261
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 127/263 (48%), Positives = 176/263 (66%), Gaps = 6/263 (2%)
Query: 91 IHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDN 150
+H+AMRY++ GG+R P+ CIA+CELVGG + AMP ACALEMI + DDLP +D+
Sbjct: 1 MHEAMRYAV-GGGRRTCPIACIAACELVGGTQDDAMPGACALEMIKASFCVQDDLPSIDD 59
Query: 151 DERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVE 210
E R KP H FG TA+ AG ALL+L EH+A +G D R +AE+ A+G
Sbjct: 60 SELRHGKPTVHRAFGIPTALFAGTALLALGFEHLAARYSG---DTAARMVAEVSRAIGST 116
Query: 211 GLVAGEFVDIASEGKD--VSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNY 268
GL+AG+ VD+ E D V L+ LE++H+HKT+ LLEA++V GA+ GG + E+E +R Y
Sbjct: 117 GLLAGQAVDLGIENPDRAVELETLEFVHLHKTSALLEASLVAGAIAGGASEQEIEALRAY 176
Query: 269 ARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAI 328
R GLL+Q+VDD+ D TK+ EELGK G+D +GK+TY ++G++ ++ GELL +A
Sbjct: 177 GRVTGLLYQIVDDVADATKTMEELGKIPGQDAMAGKSTYSTILGVDKSREMVGELLVEAK 236
Query: 329 EELAYFEASKAAPLYFLANYIAS 351
E L FE +KA PL LAN+ A+
Sbjct: 237 ERLGVFEETKALPLIHLANHFAN 259
>gi|94264970|ref|ZP_01288741.1| Polyprenyl synthetase [delta proteobacterium MLMS-1]
gi|93454573|gb|EAT04851.1| Polyprenyl synthetase [delta proteobacterium MLMS-1]
Length = 315
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 141/310 (45%), Positives = 195/310 (62%), Gaps = 5/310 (1%)
Query: 49 NSVFESTDIPLPTFPFEEYMIRKAEQVNKALDEAVVLQP-PVKIH-KAMRYSLLAGGKRV 106
N + T + T ++Y+ + E V AL++ + + P+ H +AMRYSLLAGGKRV
Sbjct: 7 NRLQNLTRAKVTTLDIKQYLAAQRELVEAALEQLLPAEDGPLAAHIEAMRYSLLAGGKRV 66
Query: 107 RPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGE 166
RP+LC+A+ E VG D +P A ALE IHT SLIHDDLP +DND+ RR P SH+ FGE
Sbjct: 67 RPILCLAAAEAVGSDPKPLLPVAGALECIHTYSLIHDDLPAMDNDDLRRGMPTSHKKFGE 126
Query: 167 STAILAGDALLSLALEHVAVNIA--GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG 224
+ AILAGD LLS A E +A + G P +R +A + +A+G G+V G+ +DI +EG
Sbjct: 127 AAAILAGDGLLSFAFELLARPLGEHGPGPAAQLRLLATVAAAVGPRGMVGGQVLDIEAEG 186
Query: 225 KDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILD 284
+ + L EL+ IH HKT L+ AAV GA+ GG + +++ + Y + GL FQ+VDD+L+
Sbjct: 187 RRLELDELQQIHRHKTGALITAAVQAGAIGGGASETQLQALTRYGQQTGLAFQIVDDLLN 246
Query: 285 VTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYF 344
VT + LGK AG D A GKATYP L+G+E + A E + A+ L F+ +A PL
Sbjct: 247 VTSDTATLGKAAGSDAARGKATYPALLGLEATEDKAREAVAAAVAALESFD-HRAEPLRE 305
Query: 345 LANYIASRQN 354
LA YI SR+
Sbjct: 306 LARYIHSRKK 315
>gi|333897019|ref|YP_004470893.1| polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333112284|gb|AEF17221.1| Polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 293
Score = 251 bits (640), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 126/293 (43%), Positives = 194/293 (66%), Gaps = 3/293 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQP-PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
F++ + K E +NK L+E + L P + +AM+YS+ AGGKR+RP+LCI++CELVGG++
Sbjct: 2 FDDILREKIEYINKGLNEFLSLTDRPEVLFEAMKYSVFAGGKRLRPVLCISACELVGGNK 61
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
A+P ACA+E IHT SLIHDDLP +DND+ RR KP +H+V+GE+ AILAGDALL+ E
Sbjct: 62 EDALPVACAIEFIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDALLNYGFE 121
Query: 183 -HVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
+ + +++A E+ A G G++AG+ VD+ SE K++ +L+++H HKT
Sbjct: 122 VLIQQALNSNKSQNILKAADEIARAAGCRGMIAGQVVDLLSENKEIGEYDLKFMHDHKTG 181
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
L++A+++ GA+IGG +A ++++ +YA +G FQV DDILDV +LGK G D+A
Sbjct: 182 ALIKASILAGAIIGGADAATLKKLSSYAEYLGFAFQVKDDILDVQGDEAKLGKDIGSDIA 241
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+GK+T+ ++G++ + EL +AI L F +K L L Y+A R +
Sbjct: 242 NGKSTFVSVLGLQRSVELVNELTEKAISILNDF-GNKGEFLKSLTKYMAERDS 293
>gi|319788992|ref|YP_004150625.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1]
gi|317113494|gb|ADU95984.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1]
Length = 294
Score = 250 bits (639), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 132/286 (46%), Positives = 190/286 (66%), Gaps = 10/286 (3%)
Query: 76 NKALDEAVVLQ--PP-----VKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPA 128
KAL ++V+L PP K+++A++YSL GGKR+RP+LC+A CE+VGG+ + A+
Sbjct: 10 RKALIDSVLLTYLPPEPEFGKKLYEAVKYSLTVGGKRLRPILCLAGCEIVGGNRNDALTP 69
Query: 129 ACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNI 188
ACA+EMIHT SLIHDDLP +DND RR P + FGE+TAILAGDALL+ A E +A
Sbjct: 70 ACAIEMIHTYSLIHDDLPAMDNDTLRRGHPTTWVKFGEATAILAGDALLNRAFEVLA--D 127
Query: 189 AGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKTAKLLEAA 247
+R V+ I+E+ A G+ G+V G+ D+ +EG+ DV L+EL +IH HKT +L+ A+
Sbjct: 128 WEFDCNRKVKVISEIARASGMLGMVLGQQCDLDAEGRGDVPLEELLFIHKHKTGRLITAS 187
Query: 248 VVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATY 307
VV G + GGG+ E++ +R Y +GL FQ++DD+LDV E+LGK G DL GK T+
Sbjct: 188 VVSGGITGGGSPEEIDALRRYGDSLGLAFQIIDDVLDVVGDQEKLGKNVGSDLEKGKTTF 247
Query: 308 PKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
+ G+E A+ A E + +A+E L+ F A K PL +A ++ R+
Sbjct: 248 VTIFGVEKARKMAYEEVERAVEALSIFPAEKREPLEAIARFVVERE 293
>gi|289578292|ref|YP_003476919.1| Geranyltranstransferase [Thermoanaerobacter italicus Ab9]
gi|289528005|gb|ADD02357.1| Geranyltranstransferase [Thermoanaerobacter italicus Ab9]
Length = 294
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 133/295 (45%), Positives = 190/295 (64%), Gaps = 6/295 (2%)
Query: 64 FEEYMIRKAEQVNKALDEAV-VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
F+E + K + + K L + V + P I++AM+YS+ AGGKR+RP+LC++SCEL GD
Sbjct: 2 FKEQLKEKQQLIEKELHRILEVEENPQIIYEAMKYSVFAGGKRLRPVLCLSSCELFEGDI 61
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
A+P ACA+E+IHT SLIHDDLP +DND+ RR KP +H+V+GE+ AILAGD LL+LA E
Sbjct: 62 KKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGLLNLAFE 121
Query: 183 HVAVNIAGVSP---DRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
V + A +P R+++A E+ A G +G++ G+ VDI S+ ++ +EL+++H HK
Sbjct: 122 -VLIRHALENPHDYQRILKATNEIARASGCKGMIGGQVVDILSQNTKLTYEELKFMHEHK 180
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T L+EA+V GA I G ++ +R YA IGL FQ+ DDILDV E+LGK G D
Sbjct: 181 TGALIEASVCAGAYIAGAIEEDIHALREYASLIGLAFQIKDDILDVIGEEEKLGKKVGSD 240
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
GK T+ + G++ ++ EL +AIE L F KA L L+NY+ R N
Sbjct: 241 REKGKVTFVNIFGLKKSQQMVVELTQKAIEILDRF-GEKALFLKELSNYLIERVN 294
>gi|148264230|ref|YP_001230936.1| polyprenyl synthetase [Geobacter uraniireducens Rf4]
gi|146397730|gb|ABQ26363.1| farnesyl-diphosphate synthase [Geobacter uraniireducens Rf4]
Length = 297
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 141/296 (47%), Positives = 198/296 (66%), Gaps = 6/296 (2%)
Query: 64 FEEYMIRKAEQVNKALDEAV--VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
+ Y+ + V++ALD + + P +HK+MRYS+ AGGKR+RP+L +A+C+ VGGD
Sbjct: 3 LKAYLKERCTLVDEALDRFLPKADELPFSLHKSMRYSVFAGGKRIRPILMLAACDAVGGD 62
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA- 180
S AMPAACA+EMIHT SLIHDDLP +D+D+ RR P +H+VFGE+ AILAGDALL+ A
Sbjct: 63 ISLAMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKVFGEAIAILAGDALLTEAF 122
Query: 181 -LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVH 238
L A + P+ V+R I E+ G G+V G+ VD+ SEGK ++ L ++YIH H
Sbjct: 123 ILMSRVEPSASLPPEAVLRVIQEISHCAGSHGMVGGQVVDMESEGKAEMDLATVQYIHTH 182
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT L++A+V GA++GG + + + Y IGL FQ+ DDILD+ ++EE+GK AG
Sbjct: 183 KTGALIKASVKAGAILGGADEARLASLTTYGEAIGLAFQIADDILDIEGTTEEIGKDAGS 242
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
D A GKATYP +MG+ +K A EL+ A+E LA F+ +A PL +A YI R++
Sbjct: 243 DEARGKATYPAVMGLAESKKRAVELVDMALESLAGFD-HRADPLRDIATYIVKRKS 297
>gi|297544572|ref|YP_003676874.1| polyprenyl synthetase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296842347|gb|ADH60863.1| Polyprenyl synthetase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 294
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 133/295 (45%), Positives = 190/295 (64%), Gaps = 6/295 (2%)
Query: 64 FEEYMIRKAEQVNKALDEAV-VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
F+E + K + + K L + V + P I++AM+YS+ AGGKR+RP+LC++SCEL GD
Sbjct: 2 FKEQLKEKQQLIEKELHRILEVEENPQIIYEAMKYSVFAGGKRLRPVLCLSSCELFEGDI 61
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
A+P ACA+E+IHT SLIHDDLP +DND+ RR KP +H+V+GE+ AILAGD LL+LA E
Sbjct: 62 KKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGLLNLAFE 121
Query: 183 HVAVNIAGVSP---DRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
V + A +P R+++A E+ A G +G++ G+ VDI S+ ++ +EL+++H HK
Sbjct: 122 -VLIRHALENPHDYQRILKATDEIARASGCKGMIGGQVVDILSQNTKLTYEELKFMHEHK 180
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T L+EA+V GA I G ++ +R YA IGL FQ+ DDILDV E+LGK G D
Sbjct: 181 TGALIEASVCAGAYIAGAIEEDIHALREYASLIGLAFQIKDDILDVIGEEEKLGKKVGSD 240
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
GK T+ + G++ ++ EL +AIE L F KA L L+NY+ R N
Sbjct: 241 REKGKVTFVNIFGLKKSQQMVVELTQKAIEILDRF-GEKALFLKELSNYLIERVN 294
>gi|302819480|ref|XP_002991410.1| hypothetical protein SELMODRAFT_133501 [Selaginella moellendorffii]
gi|300140803|gb|EFJ07522.1| hypothetical protein SELMODRAFT_133501 [Selaginella moellendorffii]
Length = 328
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 137/320 (42%), Positives = 203/320 (63%), Gaps = 17/320 (5%)
Query: 37 LFSKKIKARHAQNSVFESTDIPLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVK------ 90
+FS +++ R S S+ P F ++ Y+ K + V+ ++ A L PP K
Sbjct: 9 VFSPRVQYRRIATSA--SSTKP-NKFDYDLYVKSKFKAVSISIQHA--LPPPFKRPETLQ 63
Query: 91 IHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDN 150
+H+AMRY+L + G+ + ++CIA+CELVGG + AMP ACA+EMI T + + DDLP +DN
Sbjct: 64 LHEAMRYAL-SQGRLMCAIVCIAACELVGGSQDDAMPGACAVEMIKTSTCVQDDLPSIDN 122
Query: 151 DERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVE 210
E R KP H FG TA+ AG ALL L EH+A + G D R + E+ A+G
Sbjct: 123 AELRDGKPTVHCAFGIPTALFAGTALLVLGFEHLAAHYRG---DTAARMVGEVSRAVGST 179
Query: 211 GLVAGEFVD--IASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNY 268
GL+AG+ VD I + G+ V L+ LE++H+HKT+ LLEA++V GA+ GG + ++E +R Y
Sbjct: 180 GLLAGQAVDMGIQNAGRAVELETLEFVHLHKTSALLEASLVIGAIAGGASDQDIEALRAY 239
Query: 269 ARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAI 328
R GLL+Q+VDDI D TK++EELGK AG+D +GK+TY ++G++ ++ G+LL +A
Sbjct: 240 GRVTGLLYQIVDDIADATKTTEELGKVAGQDAMTGKSTYSTILGVDKSREIVGQLLVEAK 299
Query: 329 EELAYFEASKAAPLYFLANY 348
E L FE +KA PL L ++
Sbjct: 300 ERLGVFEETKALPLIHLMDH 319
>gi|39996864|ref|NP_952815.1| trans-isoprenyl diphosphate synthase [Geobacter sulfurreducens PCA]
gi|409912286|ref|YP_006890751.1| trans-isoprenyl diphosphate synthase [Geobacter sulfurreducens
KN400]
gi|39983752|gb|AAR35142.1| trans-isoprenyl diphosphate synthase [Geobacter sulfurreducens PCA]
gi|298505877|gb|ADI84600.1| trans-isoprenyl diphosphate synthase [Geobacter sulfurreducens
KN400]
Length = 297
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 141/293 (48%), Positives = 200/293 (68%), Gaps = 6/293 (2%)
Query: 67 YMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW 124
Y+ + V++AL+ + + P +H+AMRYS+ AGGKRVRP+L +A+C+ VGGD +
Sbjct: 6 YLKERCALVDEALERHLPAEDELPSSVHRAMRYSVFAGGKRVRPILMLAACDAVGGDTAL 65
Query: 125 AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV 184
A+PAACA+EMIHT SLIHDDLP +D+D+ RR +P +H+VFGE+ AILAGDALL+ A +
Sbjct: 66 ALPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDALLTEAFILI 125
Query: 185 A--VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVHKTA 241
+ A V DR++ I E+ G G+V G+ VD+ SEG K++ L ++YIH KT
Sbjct: 126 SSPSYAAAVGSDRLLPVIHEIALCAGSRGMVGGQVVDMESEGNKEIDLATVQYIHTRKTG 185
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
L++A++ GAV+GG NA V+ V Y IGL FQ+ DDILD+ ++E++GK AG D A
Sbjct: 186 ALIKASIKAGAVLGGANADAVKAVTRYGEAIGLAFQIADDILDIEGTTEQIGKDAGSDEA 245
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
GKATYP ++G+ +K A ELL AIE L+ F+ +A PL +A YI SR++
Sbjct: 246 RGKATYPAVLGLAESKRRAQELLDLAIEALSPFD-HRADPLREIARYIVSRKS 297
>gi|357038612|ref|ZP_09100409.1| Farnesyltranstransferase [Desulfotomaculum gibsoniae DSM 7213]
gi|355359404|gb|EHG07166.1| Farnesyltranstransferase [Desulfotomaculum gibsoniae DSM 7213]
Length = 296
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/278 (47%), Positives = 179/278 (64%), Gaps = 6/278 (2%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQ---PPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
F+E + R+A V++AL+E + PP+ IH+AMRYS+ AGGKR+RP L +A VGG
Sbjct: 3 FKEELARQANMVDEALNEYLPKAGSYPPL-IHEAMRYSVFAGGKRLRPALVLAGARAVGG 61
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
DE + AACA+E++HT SL+HDDLP +DND+ RR P +H+V+GE+ A+LAGDALL+LA
Sbjct: 62 DEKSVLQAACAIELLHTYSLVHDDLPAMDNDDFRRGNPTNHKVYGEAMAVLAGDALLTLA 121
Query: 181 LEHVA--VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
+A DRVVR IAE+ A G GL+ G+ VD+ S GK + + LEYIHVH
Sbjct: 122 FGLLAGVSQTGSFGADRVVRVIAEVAEAAGTAGLIGGQVVDMQSTGKSIDKQTLEYIHVH 181
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT L A+V GA++ G ++ + YA +GL FQ+VDDILD+ ++LGK G
Sbjct: 182 KTGALYRASVRTGAILAGAAPEQLYHLTVYAENLGLAFQIVDDILDIAGDEQKLGKPIGS 241
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEA 336
D + KATYP L G+ A+S A + QA LA F A
Sbjct: 242 DTKNQKATYPALHGLAAARSIARQAAEQANGALASFGA 279
>gi|134298940|ref|YP_001112436.1| polyprenyl synthetase [Desulfotomaculum reducens MI-1]
gi|134051640|gb|ABO49611.1| farnesyl-diphosphate synthase [Desulfotomaculum reducens MI-1]
Length = 294
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 124/293 (42%), Positives = 184/293 (62%), Gaps = 3/293 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F+E + + +++V++ALD + P IH+AMRYS+ AGGKR+RP+L +A+ + VGG+
Sbjct: 3 FKEELKQWSQKVDEALDRYIPSSDAYPSVIHEAMRYSIFAGGKRLRPILVLAATQAVGGN 62
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
MP ACA+E+IHT SL+HDDLP +DND+ RR +P +H+V+GE+ AIL GDAL +LA
Sbjct: 63 TEKVMPVACAMELIHTYSLVHDDLPAMDNDDFRRGRPTNHKVYGEAMAILVGDALQTLAF 122
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
E +A DRV + E+ A G GL+ G+ VDI SE +D+ LEYIH HKT
Sbjct: 123 ELIAQTTESFEADRVNQVTLEIAKAAGSSGLIGGQVVDILSENRDIDGDTLEYIHRHKTG 182
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
L A++ GA++GG ++ + YA +GL FQ+ DD+LD+ ++GK G D+
Sbjct: 183 ALFRASIRAGAILGGATVNQLAALTLYAEQMGLAFQIKDDLLDIEGDEAKIGKPVGSDIK 242
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K+TYP + GIE AK A E +A+ + F KA L + ++I +R +
Sbjct: 243 NQKSTYPSIYGIEEAKRMATEAAAEAVNAIKIFN-HKAEFLQDIMHFIINRDH 294
>gi|302769336|ref|XP_002968087.1| hypothetical protein SELMODRAFT_231100 [Selaginella moellendorffii]
gi|300163731|gb|EFJ30341.1| hypothetical protein SELMODRAFT_231100 [Selaginella moellendorffii]
Length = 261
Score = 247 bits (631), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 125/263 (47%), Positives = 175/263 (66%), Gaps = 6/263 (2%)
Query: 91 IHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDN 150
+H AMRY++ GG+R P+ CIA+CELVGG + AMP ACALEMI + DDLP +D+
Sbjct: 1 MHDAMRYAV-GGGRRTCPIACIAACELVGGTQDDAMPGACALEMIKASFCVQDDLPSIDD 59
Query: 151 DERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVE 210
E R KP H FG TA+ AG ALL+L EH+A +G D R +AE+ A+G
Sbjct: 60 SELRHGKPTVHRAFGIPTALFAGTALLALGFEHLAARYSG---DTAARMVAEVGRAIGST 116
Query: 211 GLVAGEFVDIASEGKD--VSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNY 268
GL+AG+ VD+ E D V L+ LE++H+HKT+ LLEA++V GA+ GG + E+E +R Y
Sbjct: 117 GLLAGQAVDLGIENPDRGVELETLEFVHLHKTSALLEASLVAGAIAGGASEQEIEALRAY 176
Query: 269 ARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAI 328
R GLL+Q+VDD+ D TK+ EELGK G+D +GK+TY ++G++ ++ G+LL +A
Sbjct: 177 GRVTGLLYQIVDDVADATKTMEELGKIPGQDAMAGKSTYSTILGVDKSREMVGQLLVEAK 236
Query: 329 EELAYFEASKAAPLYFLANYIAS 351
E L FE +KA PL LA++ A+
Sbjct: 237 ERLGVFEETKALPLIHLADHFAN 259
>gi|423090783|ref|ZP_17079069.1| putative geranyltranstransferase [Clostridium difficile
70-100-2010]
gi|357555898|gb|EHJ37520.1| putative geranyltranstransferase [Clostridium difficile
70-100-2010]
Length = 295
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 128/298 (42%), Positives = 195/298 (65%), Gaps = 10/298 (3%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVK--IHKAMRYSLLAGGKRVRPLLCIASCELVG 119
F++ + KA V K L E + + + + +AM YSL AGGKR+RP+L + +C++VG
Sbjct: 1 MEFKQCLKEKASFVEKVLKEYMPKEEGYQKTVIEAMNYSLSAGGKRLRPILTLEACKIVG 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
G+E A+P A A+EMIHT SLIHDDLP LDND+ RR +P +H+V+GE+ ILAGDALL+
Sbjct: 61 GNEDEAIPFAIAIEMIHTYSLIHDDLPALDNDDLRRGRPTNHKVYGEAMGILAGDALLNY 120
Query: 180 ALE-HVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
A E +A +I +P++ ++AI E+ G+ G++ G+ VD+ SE K + ++L+YIH++
Sbjct: 121 AFEVMLAGSINKENPEKYLKAINEIAKGAGIYGMIGGQVVDVESENKQIEKEKLDYIHMN 180
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KTA ++ ++ GA IGG N+ ++E + YA+ IGL FQ+VDDILD+ +LGK G
Sbjct: 181 KTAAMMVGCMIAGATIGGANSEQMEEITKYAKNIGLSFQIVDDILDIVGDEAKLGKKVGS 240
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQA---IEELAYFEASKAAPLYFLANYIASRQ 353
D+ + K+TYP L+G++ +K A L+ +A IE+L + L LA YI R+
Sbjct: 241 DIENHKSTYPSLLGLDKSKEIAHNLIDEAKKSIEKL----SDDVDFLKGLAEYIIDRE 294
>gi|118580818|ref|YP_902068.1| polyprenyl synthetase [Pelobacter propionicus DSM 2379]
gi|118503528|gb|ABL00011.1| farnesyl-diphosphate synthase [Pelobacter propionicus DSM 2379]
Length = 297
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 139/296 (46%), Positives = 197/296 (66%), Gaps = 6/296 (2%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
+ Y+ + +V+ ALD + + P +HKAMRYS+ AGGKRVRP+L +A+C+ VGGD
Sbjct: 3 LKAYLKEQCARVDAALDSYLPRETELPHSLHKAMRYSVFAGGKRVRPILMLAACQAVGGD 62
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
A+PAACA+EMIHT SLIHDDLP +D+D+ RR P +H+VFGE+ AILAGDALL+ A
Sbjct: 63 TEVAIPAACAMEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKVFGEAVAILAGDALLTEAF 122
Query: 182 EHVA--VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVH 238
+ ++ AGV + + I ++ S G G+V G+ VD+ SEGK D+ L ++YIH H
Sbjct: 123 KLLSNPACAAGVPSEARLAVIHQIASCAGSHGMVGGQVVDMESEGKSDIDLPTVQYIHTH 182
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT L++AAVV GA++GG + ++ + Y GL FQ+ DDILD+ ++EE+GK AG
Sbjct: 183 KTGALIKAAVVAGALLGGADREKLAAITRYGSAAGLAFQIADDILDIEGTTEEIGKDAGS 242
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
D A GKATYP +MG+ AK A ++ +A + L F S+A PL +A YI +R+
Sbjct: 243 DQARGKATYPAVMGLAAAKQEATTMMDEAFKALEIF-GSEADPLREIARYIVTRKK 297
>gi|390981228|pdb|4F62|A Chain A, Crystal Structure Of A Putative Farnesyl-Diphosphate
Synthase From Marinomonas Sp. Med121 (Target Efi-501980)
gi|390981229|pdb|4F62|B Chain B, Crystal Structure Of A Putative Farnesyl-Diphosphate
Synthase From Marinomonas Sp. Med121 (Target Efi-501980)
Length = 317
Score = 244 bits (624), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 129/269 (47%), Positives = 173/269 (64%), Gaps = 3/269 (1%)
Query: 87 PPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLP 146
P ++H AMRYSL GGKR+RP+L AS +LVG S +A ALE IH SLIHDDLP
Sbjct: 29 PANQLHNAMRYSLFNGGKRIRPMLTYASAQLVGDISSLTDASAAALESIHAYSLIHDDLP 88
Query: 147 FLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSA 206
+DNDE RR KP H F E+TAILAGDAL + A E ++ N P+ ++ I E+ A
Sbjct: 89 AMDNDELRRGKPTCHIQFDEATAILAGDALQTFAFELLS-NPTSAQPELAIKLIQELVVA 147
Query: 207 MGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIE-VERV 265
G G++ G+ +D++SE K++SL ELE +HVHKT L++A+V GA+ G E + ++
Sbjct: 148 SGRNGMITGQMIDLSSENKNISLAELEQMHVHKTGALIKASVRMGALSTGQVKPEQLAKL 207
Query: 266 RNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLG 325
YA IGL FQV DDI+D+T +E LGKT D + KATYPKL+G++ AK+ L
Sbjct: 208 DAYAHAIGLAFQVQDDIIDLTSDTETLGKTQFSDAEANKATYPKLLGLDGAKALVVRLHE 267
Query: 326 QAIEELAYFEASKAAPLYFLANYIASRQN 354
QAI +++ F K+ PL LANYI R +
Sbjct: 268 QAIAQISEF-GDKSQPLTDLANYIIDRNH 295
>gi|87120692|ref|ZP_01076585.1| geranyltranstransferase [Marinomonas sp. MED121]
gi|86163920|gb|EAQ65192.1| geranyltranstransferase [Marinomonas sp. MED121]
Length = 293
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 129/269 (47%), Positives = 173/269 (64%), Gaps = 3/269 (1%)
Query: 87 PPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLP 146
P ++H AMRYSL GGKR+RP+L AS +LVG S +A ALE IH SLIHDDLP
Sbjct: 27 PANQLHNAMRYSLFNGGKRIRPMLTYASAQLVGDISSLTDASAAALESIHAYSLIHDDLP 86
Query: 147 FLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSA 206
+DNDE RR KP H F E+TAILAGDAL + A E ++ N P+ ++ I E+ A
Sbjct: 87 AMDNDELRRGKPTCHIQFDEATAILAGDALQTFAFELLS-NPTSAQPELAIKLIQELVVA 145
Query: 207 MGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIE-VERV 265
G G++ G+ +D++SE K++SL ELE +HVHKT L++A+V GA+ G E + ++
Sbjct: 146 SGRNGMITGQMIDLSSENKNISLAELEQMHVHKTGALIKASVRMGALSTGQVKPEQLAKL 205
Query: 266 RNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLG 325
YA IGL FQV DDI+D+T +E LGKT D + KATYPKL+G++ AK+ L
Sbjct: 206 DAYAHAIGLAFQVQDDIIDLTSDTETLGKTQFSDAEANKATYPKLLGLDGAKALVVRLHE 265
Query: 326 QAIEELAYFEASKAAPLYFLANYIASRQN 354
QAI +++ F K+ PL LANYI R +
Sbjct: 266 QAIAQISEF-GDKSQPLTDLANYIIDRNH 293
>gi|255655210|ref|ZP_05400619.1| geranyltranstransferase [Clostridium difficile QCD-23m63]
gi|296451195|ref|ZP_06892936.1| Farnesyltranstransferase [Clostridium difficile NAP08]
gi|296880453|ref|ZP_06904415.1| Farnesyltranstransferase [Clostridium difficile NAP07]
gi|296260016|gb|EFH06870.1| Farnesyltranstransferase [Clostridium difficile NAP08]
gi|296428407|gb|EFH14292.1| Farnesyltranstransferase [Clostridium difficile NAP07]
Length = 295
Score = 244 bits (622), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 128/298 (42%), Positives = 194/298 (65%), Gaps = 10/298 (3%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVK--IHKAMRYSLLAGGKRVRPLLCIASCELVG 119
F++ + KA V K L E + + + + +AM YSL AGGKR+RP+L + +C++VG
Sbjct: 1 MEFKQCLKEKASFVEKVLKEYMPKEEGYQKTVIEAMNYSLSAGGKRLRPILTLEACKIVG 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
G+E A+P A A+EMIHT SLIHDDLP LDND+ RR +P +H+V+GE+ ILAGDALL+
Sbjct: 61 GNEDEAIPFAIAIEMIHTYSLIHDDLPALDNDDLRRGRPTNHKVYGEAMGILAGDALLNY 120
Query: 180 ALE-HVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
A E +A +I +P++ ++AI E+ G+ G++ G+ VD+ SE K + ++L+YIH++
Sbjct: 121 AFEVMLAGSINKENPEKYLKAINEIAKGAGIYGMIGGQVVDVESENKQIEKEKLDYIHMN 180
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KTA ++ + GA IGG N+ ++E + YA+ IGL FQ+VDDILD+ +LGK G
Sbjct: 181 KTAAMMVGCMRAGATIGGANSEQMEEITKYAKNIGLSFQIVDDILDIVGDESKLGKKVGS 240
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQA---IEELAYFEASKAAPLYFLANYIASRQ 353
D+ + K+TYP L+G++ +K A L+ +A IE+L + L LA YI R+
Sbjct: 241 DIENHKSTYPSLLGLDKSKEIAHNLIDEAKKSIEKL----SDDVDFLNGLAEYIIDRE 294
>gi|126698801|ref|YP_001087698.1| geranyltranstransferase [Clostridium difficile 630]
gi|254974740|ref|ZP_05271212.1| geranyltranstransferase [Clostridium difficile QCD-66c26]
gi|255092129|ref|ZP_05321607.1| geranyltranstransferase [Clostridium difficile CIP 107932]
gi|255100220|ref|ZP_05329197.1| geranyltranstransferase [Clostridium difficile QCD-63q42]
gi|255306109|ref|ZP_05350281.1| geranyltranstransferase [Clostridium difficile ATCC 43255]
gi|255313866|ref|ZP_05355449.1| geranyltranstransferase [Clostridium difficile QCD-76w55]
gi|255516547|ref|ZP_05384223.1| geranyltranstransferase [Clostridium difficile QCD-97b34]
gi|255649647|ref|ZP_05396549.1| geranyltranstransferase [Clostridium difficile QCD-37x79]
gi|260682811|ref|YP_003214096.1| geranyltranstransferase [Clostridium difficile CD196]
gi|260686409|ref|YP_003217542.1| geranyltranstransferase [Clostridium difficile R20291]
gi|306519764|ref|ZP_07406111.1| geranyltranstransferase [Clostridium difficile QCD-32g58]
gi|384360393|ref|YP_006198245.1| geranyltranstransferase [Clostridium difficile BI1]
gi|115250238|emb|CAJ68059.1| Geranyltranstransferase [Clostridium difficile 630]
gi|260208974|emb|CBA62025.1| geranyltranstransferase [Clostridium difficile CD196]
gi|260212425|emb|CBE03292.1| geranyltranstransferase [Clostridium difficile R20291]
Length = 295
Score = 243 bits (621), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 128/298 (42%), Positives = 194/298 (65%), Gaps = 10/298 (3%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVK--IHKAMRYSLLAGGKRVRPLLCIASCELVG 119
F++ + KA V K L E + + + + +AM YSL AGGKR+RP+L + +C++VG
Sbjct: 1 MEFKQCLKEKASFVEKVLKEYMPKEEGYQKTVIEAMNYSLSAGGKRLRPILTLEACKIVG 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
G+E A+P A A+EMIHT SLIHDDLP LDND+ RR +P +H+V+GE+ ILAGDALL+
Sbjct: 61 GNEDEAIPFAIAIEMIHTYSLIHDDLPALDNDDLRRGRPTNHKVYGEAMGILAGDALLNY 120
Query: 180 ALE-HVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
A E +A +I +P++ ++AI E+ G+ G++ G+ VD+ SE K + ++L+YIH++
Sbjct: 121 AFEVMLAGSINKENPEKYLKAINEIAKGAGIYGMIGGQVVDVESENKQIEKEKLDYIHMN 180
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KTA ++ + GA IGG N+ ++E + YA+ IGL FQ+VDDILD+ +LGK G
Sbjct: 181 KTAAMMVGCMRAGATIGGANSEQMEEITKYAKNIGLSFQIVDDILDIVGDEAKLGKKVGS 240
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQA---IEELAYFEASKAAPLYFLANYIASRQ 353
D+ + K+TYP L+G++ +K A L+ +A IE+L + L LA YI R+
Sbjct: 241 DIENHKSTYPSLLGLDKSKEIAHNLIDEAKKSIEKL----SDDVDFLKGLAEYIIDRE 294
>gi|302036073|ref|YP_003796395.1| geranyltranstransferase [Candidatus Nitrospira defluvii]
gi|300604137|emb|CBK40469.1| Geranyltranstransferase [Candidatus Nitrospira defluvii]
Length = 326
Score = 243 bits (621), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 124/266 (46%), Positives = 170/266 (63%), Gaps = 3/266 (1%)
Query: 91 IHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDN 150
+H++MRYSL+AGGKRVRP+L IA+ E +G M AC+LE IHT SLIHDDLP +DN
Sbjct: 62 LHESMRYSLMAGGKRVRPILTIAAAEAIGATPPGLMAVACSLEFIHTYSLIHDDLPSMDN 121
Query: 151 DERRRSKPASHEVFGESTAILAGDALLSLALEHVAVN--IAGVSPDRVVRAIAEMCSAMG 208
D+ RR KP +H+V+GE+ AILAGDALL++A + ++ + G P R VR + E+ G
Sbjct: 122 DDFRRGKPTNHKVYGEAMAILAGDALLTMAFDLISRPELMKGCEPTRQVRILQELAYGSG 181
Query: 209 VEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNY 268
G+V G+ DI +E +D+ L L+ IH HKT L+ AAV GA+ G +++ + Y
Sbjct: 182 NMGMVGGQVFDIQAENQDIDLPTLQNIHKHKTGMLIRAAVRMGAMAAGATDRQLDDMTGY 241
Query: 269 ARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAI 328
A IGL FQ+ DD+L+VT + EELGK D GK TYP G+E A+ A + + +AI
Sbjct: 242 AEDIGLAFQIADDVLNVTGTREELGKNPNTDAERGKKTYPTFYGVEGARKLADDCVTRAI 301
Query: 329 EELAYFEASKAAPLYFLANYIASRQN 354
L F S A PL +A YI +R+N
Sbjct: 302 GRLNTFGPS-ADPLREIARYITARKN 326
>gi|374993734|ref|YP_004969233.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus orientis
DSM 765]
gi|357212100|gb|AET66718.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus orientis
DSM 765]
Length = 288
Score = 243 bits (620), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 134/296 (45%), Positives = 188/296 (63%), Gaps = 14/296 (4%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVK---IHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
F++ R V + LD Q P K I+++MRYSL+ GGKR+RP+L +AS E VGG
Sbjct: 2 FKDTFQRYINMVEQTLD-----QLPWKQNLINESMRYSLIGGGKRIRPVLALASAETVGG 56
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
+ AA ALE+IHT SLIHDDLP +DND+ RR + ++H+VFGE+ AILAGDALL+ A
Sbjct: 57 KPEAILQAAVALELIHTYSLIHDDLPAMDNDDYRRGRLSNHKVFGEAQAILAGDALLTYA 116
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKT 240
E + N+ P+R++R I E+ A G +G+V G+ +D+A EG+D++L E+E IH KT
Sbjct: 117 FELLG-NLDHAQPERLLRVITEVAMAAGKDGMVGGQVLDLAGEGRDLTLNEIEEIHKAKT 175
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
+L + G ++GGG+ E++ + YA+ +GL FQ+ DDILD+ SE LGK AG DL
Sbjct: 176 GAILTVSARLGGILGGGSEDEIDALTEYAQSLGLAFQIKDDILDIVGDSETLGKPAGSDL 235
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFE--ASKAAPLYFLANYIASRQN 354
GK+TY L+G+E A +L Q I+ A E A K L LA YI R++
Sbjct: 236 RQGKSTYVSLLGLEGASK---QLHDQIIKAQAALEPFADKGLFLKELAFYIEERKH 288
>gi|390935023|ref|YP_006392528.1| polyprenyl synthetase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389570524|gb|AFK86929.1| Polyprenyl synthetase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 293
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 121/293 (41%), Positives = 191/293 (65%), Gaps = 3/293 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQP-PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
F++ + K E +NK L+E + L P + +AMRYS+ AGGKR+RP+LCI++CELVGG++
Sbjct: 2 FDDILREKIEYINKGLNEFLSLTDRPEVLFEAMRYSVFAGGKRLRPVLCISTCELVGGNK 61
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
A+ ACA+E IHT SLIHDDLP +DND+ RR KP +H+V+GE+ AILAGDALL+ E
Sbjct: 62 EDALAVACAIEFIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDALLNYGFE 121
Query: 183 HVAVNIAGVSPDR-VVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
+ S + +++A E+ A G G++AG+ VD+ SE +++ + +L+++H HKT
Sbjct: 122 VLIQQALNSSKSQNILKAADEIARAAGCRGMIAGQVVDLLSENREIGVDDLKFMHDHKTG 181
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
L+ A+++ GA++GG + ++++ +YA +G FQV DDILD+ ++GK G D+
Sbjct: 182 ALIRASILAGAIMGGADDDTLKKLSSYAEYLGFAFQVKDDILDILGDEMKIGKDIGSDMV 241
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+GK+T+ ++G++ + EL +AI L F K L L Y+A R +
Sbjct: 242 NGKSTFVSVLGLQRSVDLINELTEKAINILDGF-GEKGEFLKNLTQYMAERDS 293
>gi|406871183|gb|EKD22087.1| hypothetical protein ACD_87C00167G0001 [uncultured bacterium]
Length = 302
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 130/298 (43%), Positives = 188/298 (63%), Gaps = 7/298 (2%)
Query: 62 FPFEEYMIRKAEQVNKALDEAV---VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELV 118
+EY+ + ++ LD + L PPV I +A+RYSLLAGGKR+RP+LC+A+ E V
Sbjct: 7 LQLKEYLAGRKALIDATLDGLLPDEELCPPV-IFQAVRYSLLAGGKRLRPILCLAAAEAV 65
Query: 119 GGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLS 178
GGD +P ACALE IHT SLIHDDLP +DND+ RR + +H+VFGE AILAGDALL+
Sbjct: 66 GGDSKTILPVACALEYIHTYSLIHDDLPAMDNDDYRRGRLTAHKVFGEDIAILAGDALLT 125
Query: 179 LALEHVAVN--IAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIH 236
A + + G+ P+ ++ AE+ +A G G+V G+ +D+ SEGK V L+ L+ IH
Sbjct: 126 EAFHLLTRKELMPGIPPEYILTVTAEIAAAAGWFGMVGGQVLDVRSEGKKVDLETLQQIH 185
Query: 237 VHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTA 296
KT +L+ ++ GA++ G + + +Y R IGL FQ+ DDIL+V LGK
Sbjct: 186 RLKTGELIRVSLRSGAILSGASTEMTASLSDYGRQIGLAFQIADDILNVEGDRVLLGKQT 245
Query: 297 GKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
G D A K T+P L+GIE +++ A L+ +A++ LA F+ +AAPL + YI R++
Sbjct: 246 GSDAARRKVTFPSLLGIEASRAHAESLIKEALKSLASFD-DRAAPLRLITGYILERKS 302
>gi|222055717|ref|YP_002538079.1| polyprenyl synthetase [Geobacter daltonii FRC-32]
gi|221565006|gb|ACM20978.1| Polyprenyl synthetase [Geobacter daltonii FRC-32]
Length = 297
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 139/296 (46%), Positives = 199/296 (67%), Gaps = 6/296 (2%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
+ Y+ + + V+ AL+ + L P +HK+MRYS+ AGGKR+RP+L +A+CE VGG+
Sbjct: 3 LKSYLKERCQLVDDALNRFLPLADDLPASLHKSMRYSIFAGGKRIRPILMLAACEAVGGN 62
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
S AMPAACA+EMIHT SLIHDDLP +D+D+ RR P +H+VFGE+ AILAGDALL+ A
Sbjct: 63 ISQAMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKVFGEAVAILAGDALLTEAF 122
Query: 182 EHVA--VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVH 238
++ V P +V+ I E+ G G+V G+ VD+ SEG ++ L ++YIH H
Sbjct: 123 ILLSNLAAAPTVPPAALVQVIQEISCCAGSRGMVGGQVVDMESEGNAEIDLATVQYIHTH 182
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT L++A+V GA++GG ++ + E + Y IGL FQ+ DDILD+ ++EE+GK AG
Sbjct: 183 KTGALIKASVKSGALLGGASSKDAESLTRYGEAIGLAFQIADDILDIEGTTEEIGKDAGS 242
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
D A GKATYP +MG+ AK A EL+ A++ L+ F+ KA PL +A+YI R++
Sbjct: 243 DEARGKATYPAVMGLAEAKIRAAELVDIALDALSAFDG-KADPLREIASYIVKRKS 297
>gi|117924356|ref|YP_864973.1| farnesyl-diphosphate synthase [Magnetococcus marinus MC-1]
gi|117608112|gb|ABK43567.1| farnesyl-diphosphate synthase [Magnetococcus marinus MC-1]
Length = 294
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 130/293 (44%), Positives = 177/293 (60%), Gaps = 3/293 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAV--VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
+ Y+ + V ALD + + P + AMRYSLL GGKR+RP+L +A CE VGG
Sbjct: 3 LKPYLADRKYLVESALDRLLPAADREPRALTGAMRYSLLIGGKRLRPILTLACCEAVGGA 62
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
AM ACA+E +HT SLIHDDLP +DND+ RR P H +GE+TAILAGDALL+ A
Sbjct: 63 LERAMNFACAMECVHTYSLIHDDLPAMDNDDLRRGHPTCHRQYGEATAILAGDALLTHAF 122
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
E A + GV P+ + I E+ A G G+V G+ +DI E + + L +L+ IH+HKT
Sbjct: 123 ELAAKPVTGVLPEARLELIGELAMAAGTYGMVGGQMLDIQGEKRPLELVQLQNIHIHKTG 182
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
L+ A + GA +GGG +V+ ++ Y +GL FQ+ DDILD ++ LGK G D A
Sbjct: 183 ALIRVACLAGARLGGGTPDQVKHLKRYGEALGLAFQITDDILDEVGDTKTLGKATGVDRA 242
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
KATYPKLMG+ A+ A L+ +A L F +A PL LA Y+ +R +
Sbjct: 243 LDKATYPKLMGLAQAREAAENLMQEATRCLTEF-GPQADPLRALAQYVIARTH 294
>gi|169333801|ref|ZP_02860994.1| hypothetical protein ANASTE_00187 [Anaerofustis stercorihominis DSM
17244]
gi|169259366|gb|EDS73332.1| polyprenyl synthetase [Anaerofustis stercorihominis DSM 17244]
Length = 294
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 128/269 (47%), Positives = 178/269 (66%), Gaps = 4/269 (1%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPF 147
P I ++ YSL GGKR+RP+L + SC+ VGGD + A+P A+EMIHT SLIHDDLP
Sbjct: 28 PKSIFESFNYSLFVGGKRIRPILLMESCKCVGGDTNEALPLMAAMEMIHTYSLIHDDLPC 87
Query: 148 LDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPD--RVVRAIAEMCS 205
+D+DE RR KP +H V+GE+TA+LAGD+LL+LA E + + A S D R V A+ +
Sbjct: 88 MDDDELRRGKPTNHTVYGEATALLAGDSLLNLAYETM-LKGAKSSKDINRYVEAMNVIAD 146
Query: 206 AMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERV 265
+ GV+G++AG+ +D+ SEGK+ + L++IH +KT +L A+V+ GAV+GG E++ +
Sbjct: 147 SAGVKGMIAGQVMDMESEGKEPDGETLDFIHDNKTGAILRASVISGAVVGGATDDELKNL 206
Query: 266 RNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLG 325
YAR IGL+FQVVDDILDV E LGK G D K TYP + G+E + ELL
Sbjct: 207 SEYARAIGLMFQVVDDILDVVSDEETLGKKVGMDSERNKMTYPYVYGLERSYEKVDELLN 266
Query: 326 QAIEELAYFEASKAAPLYFLANYIASRQN 354
++ L+ F S+A L LA Y+A R+N
Sbjct: 267 ISLNSLSDF-GSEADFLRELALYLAKRKN 294
>gi|414154704|ref|ZP_11411021.1| Farnesyl diphosphate synthase [Desulfotomaculum hydrothermale Lam5
= DSM 18033]
gi|411453535|emb|CCO08925.1| Farnesyl diphosphate synthase [Desulfotomaculum hydrothermale Lam5
= DSM 18033]
Length = 294
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/295 (43%), Positives = 181/295 (61%), Gaps = 7/295 (2%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQP----PVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
F+E + A QV++AL L P P +H+AMRYS+ AGGKR+RP+L +A+ + VG
Sbjct: 3 FKEQLTAWARQVDEALHN--YLPPADAYPAVLHEAMRYSVFAGGKRLRPILVLAAAKAVG 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
G+ MP ACALE+IHT SL+HDDLP +DND+ RR +P +H+V+GE+TAIL GDALL+L
Sbjct: 61 GNTDKIMPVACALELIHTYSLVHDDLPAMDNDDYRRGRPTNHKVYGEATAILVGDALLTL 120
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A E VA P V R E+ A G GL+ G+ VD+ SE K + LEYIH HK
Sbjct: 121 AFELVARCGEDCPPAAVNRVAREIAQAAGSRGLIGGQVVDLLSENKQIESSVLEYIHRHK 180
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T L AAV GA++GG ++ + YA +GL FQ+ DD+LD+ ++GK G D
Sbjct: 181 TGALFRAAVRAGAILGGAGEAQLAALTTYAEQMGLAFQIKDDLLDIEGDEAKIGKPVGSD 240
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ + K TYP L G++ A+ A E +A+ L F +A L + ++I +R +
Sbjct: 241 IKNQKVTYPSLYGLDGARRMADEAAREAVTALNIF-GPEAEFLRLMMHFIINRDH 294
>gi|423082397|ref|ZP_17070989.1| putative geranyltranstransferase [Clostridium difficile
002-P50-2011]
gi|423087809|ref|ZP_17076195.1| putative geranyltranstransferase [Clostridium difficile
050-P50-2011]
gi|357544123|gb|EHJ26129.1| putative geranyltranstransferase [Clostridium difficile
050-P50-2011]
gi|357548723|gb|EHJ30583.1| putative geranyltranstransferase [Clostridium difficile
002-P50-2011]
Length = 295
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 128/298 (42%), Positives = 193/298 (64%), Gaps = 10/298 (3%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVK--IHKAMRYSLLAGGKRVRPLLCIASCELVG 119
F++ + KA V K L E + + + + +AM YSL AGGKR+RP+L + +C++VG
Sbjct: 1 MEFKQCLKEKASFVEKVLKEYMPKEEGYQKTVIEAMNYSLSAGGKRLRPILTLEACKIVG 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
G+E A+P A A+EMIHT SLIHDDLP LDND+ RR +P +H+V+GE+ ILAGDALL+
Sbjct: 61 GNEDEAIPFAIAIEMIHTYSLIHDDLPALDNDDLRRGRPTNHKVYGEAMGILAGDALLNY 120
Query: 180 ALE-HVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
A E +A +I +P++ ++AI E+ G+ G++ G+ VD+ SE K + ++L+YIH++
Sbjct: 121 AFEVMLAGSINKENPEKYLKAINEIAKGAGIYGMIGGQVVDVESENKQIEKEKLDYIHMN 180
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KTA ++ + GA IGG N ++E + YA+ IGL FQ+VDDILD+ +LGK G
Sbjct: 181 KTAAMMVGCMRAGATIGGANFEQMEEITKYAKNIGLSFQIVDDILDIVGDEAKLGKKVGS 240
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQA---IEELAYFEASKAAPLYFLANYIASRQ 353
D+ + K+TYP L+G++ +K A L+ +A IE+L + L LA YI R+
Sbjct: 241 DIENHKSTYPSLLGLDKSKEIAHNLIDEAKKSIEKL----SDDVDFLKGLAEYIIDRE 294
>gi|189425242|ref|YP_001952419.1| polyprenyl synthetase [Geobacter lovleyi SZ]
gi|189421501|gb|ACD95899.1| Polyprenyl synthetase [Geobacter lovleyi SZ]
Length = 297
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 139/293 (47%), Positives = 195/293 (66%), Gaps = 6/293 (2%)
Query: 67 YMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW 124
Y+ K V+ AL++ + + P +HKAMRYS+ AGGKRVRP+L +A+CE VGG
Sbjct: 6 YLKEKIALVDAALEQYLPKEEERPQSLHKAMRYSIFAGGKRVRPVLMLAACEAVGGQIDK 65
Query: 125 AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV 184
AMPAACA+EMIHT SLIHDDLP +D+D+ RR +P +H+VFGE+ AILAGD LL+ A + +
Sbjct: 66 AMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDGLLTEAFKLM 125
Query: 185 AVN--IAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKTA 241
+ AG+ P + I E+ + G G+V G+ VD+ SEGK D+ L ++YIH HKT
Sbjct: 126 SDPRFAAGIDPAARLGVIHEIATCAGTYGMVGGQVVDMESEGKPDMDLPTVQYIHAHKTG 185
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
L++A+VV GA++GG + ++ +R Y GL FQ+ DDILD+ ++EE+GK AG D A
Sbjct: 186 ALIKASVVAGALLGGADDKQLAAIRRYGEAAGLAFQIADDILDIEGTTEEIGKDAGSDEA 245
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
GKATYP +MG+ AK A ++ +A+ L A+ A PL +A YI R+N
Sbjct: 246 RGKATYPAVMGLAAAKQEAQAMMDEAMLALEPLGAA-AEPLRAIARYIVERKN 297
>gi|224284786|gb|ACN40123.1| unknown [Picea sitchensis]
Length = 369
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 125/295 (42%), Positives = 181/295 (61%), Gaps = 11/295 (3%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLA-GGKRVRPLLCIASCELVGG 120
F Y +++ L+++V L+ P KIH +MRYS+LA KR P++CIA+CE VGG
Sbjct: 78 FDLRRYWNSVRKEMEAELEKSVPLRYPEKIHVSMRYSVLAEKAKRGPPMMCIAACEAVGG 137
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
+ A+P ACALEM+HT SLIHDDLP +D+D RR +P++H VFG A+LAGDAL L
Sbjct: 138 SKQQALPTACALEMVHTASLIHDDLPCMDDDPIRRGQPSNHTVFGVDMAVLAGDALFPLG 197
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGK---DVSLKELEYIHV 237
E++ + + V PDR+V+ IA++ +G +G+V G+++D+ S G D SL +E+IH
Sbjct: 198 FEYIVSSTSDVPPDRIVKVIAQIAKTVGSQGMVVGQYMDLGSTGNNKFDPSL--VEFIHE 255
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
K + E + V G +IGG EVER+RNY R +G+L+Q+ DDIL+ EE
Sbjct: 256 RKFGIMAECSAVTGGIIGGATDEEVERLRNYGRSVGVLYQIADDILE-----EEALLEGN 310
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
+ K +YP+ G+E A+ A L A EL+ F+ K+APLY +Y R
Sbjct: 311 GVIRKNKTSYPRAYGLEKAREIAETLRSNAKMELSGFDRGKSAPLYSFVDYAIDR 365
>gi|435853309|ref|YP_007314628.1| geranylgeranyl pyrophosphate synthase [Halobacteroides halobius DSM
5150]
gi|433669720|gb|AGB40535.1| geranylgeranyl pyrophosphate synthase [Halobacteroides halobius DSM
5150]
Length = 293
Score = 241 bits (614), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 135/289 (46%), Positives = 193/289 (66%), Gaps = 4/289 (1%)
Query: 66 EYMIRKAEQVNKALDEAVVLQ--PPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
+ + +KA+ +N+ L+E + ++ P K+ +AMRYS+LAGGKR+RP+L + +L+G +E
Sbjct: 5 QVITKKAKLINQTLEELLPMEEAKPKKLSQAMRYSVLAGGKRLRPILTLLVAKLIGEEEK 64
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
+PAACALEMIH SLIHDDLP +D+D+ RR +P +H+V+GE+ A+LAGD+LL+LA E
Sbjct: 65 KVLPAACALEMIHNYSLIHDDLPCMDDDDYRRGQPTNHKVYGEAMAVLAGDSLLTLAFET 124
Query: 184 VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
++ I + D+V+ A E+ A G +G+V G+ DI +EG+ + + LEYIH HKT L
Sbjct: 125 IS-RINNIDQDKVLLATQELAIAAGNQGMVGGQAADIVAEGQKIDKEGLEYIHTHKTGAL 183
Query: 244 LEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASG 303
L AAV GA++ G N E+ + YA+ IGL FQVVDDILD+ E+LGK G DL
Sbjct: 184 LRAAVRIGAILAGANKEELAALTTYAQKIGLAFQVVDDILDIEGDEEKLGKDVGSDLERD 243
Query: 304 KATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
KAT+P L G+E AK A +L +A E + F +A L LA+YI R
Sbjct: 244 KATFPALYGLEEAKKMAQKLCQEAKEAIHIF-GEEAKVLLELADYIIGR 291
>gi|404496792|ref|YP_006720898.1| trans-isoprenyl diphosphate synthase [Geobacter metallireducens
GS-15]
gi|418065257|ref|ZP_12702631.1| Polyprenyl synthetase [Geobacter metallireducens RCH3]
gi|78194397|gb|ABB32164.1| trans-isoprenyl diphosphate synthase [Geobacter metallireducens
GS-15]
gi|373562435|gb|EHP88646.1| Polyprenyl synthetase [Geobacter metallireducens RCH3]
Length = 297
Score = 240 bits (613), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 139/302 (46%), Positives = 198/302 (65%), Gaps = 18/302 (5%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
+ Y+ + V++AL+ ++ + PV +H+AMRYS+ AGGKR+RP+L +A+CE VGG
Sbjct: 3 LKNYLKERCAIVDEALERSLPGEGDLPVSVHRAMRYSVFAGGKRIRPVLMLAACEAVGGT 62
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
A+PAACA+EMIHT SLIHDDLP +D+D+ RR +P +H+VFGE+ AILAGDALL+ A
Sbjct: 63 PDLALPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDALLTEAF 122
Query: 182 EHVAVNIAGVSPD--------RVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKEL 232
I SP+ R++ I E+ G G+V G+ VD+ SEG KD+ L +
Sbjct: 123 ------ILMSSPEYAAKAGHARILPVIHEIGICAGSRGMVGGQVVDMESEGKKDIDLATV 176
Query: 233 EYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEEL 292
+YIH HKT L++A+V GA++GG + + Y IGL FQ+ DDILD+ ++E++
Sbjct: 177 QYIHTHKTGALMKASVKAGAILGGAEGDALAAMTRYGEAIGLAFQIADDILDIEGTTEQI 236
Query: 293 GKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
GK AG D A GKATYP +MG+ ++K A EL+ A+E L+ F KA PL +A YI SR
Sbjct: 237 GKDAGSDEARGKATYPAVMGLADSKRRAQELVDLALEALSPF-GEKAEPLREIARYIVSR 295
Query: 353 QN 354
++
Sbjct: 296 KS 297
>gi|206889920|ref|YP_002248053.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps)
[Thermodesulfovibrio yellowstonii DSM 11347]
gi|206741858|gb|ACI20915.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps)
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 295
Score = 240 bits (612), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 123/269 (45%), Positives = 184/269 (68%), Gaps = 4/269 (1%)
Query: 87 PPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLP 146
PP+ +H ++ YSL AGGKR+RP+LCIAS E G E+ +P A A+E IHT SLIHDDLP
Sbjct: 30 PPI-LHDSVLYSLTAGGKRLRPILCIASYEACDGMENI-VPYATAIEFIHTYSLIHDDLP 87
Query: 147 FLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVA-VNIAGVSPDRVVRAIAEMCS 205
+DND+ RR KP +H+VFGE AILAGD LL+ A ++ + A +S + +++ I+E+
Sbjct: 88 AMDNDDLRRGKPTNHKVFGEGIAILAGDGLLTEAFTILSNKDYANISSNTLLKVISEISK 147
Query: 206 AMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERV 265
A G+ G+VAG+ D+ SEGK+ + +E+IH++KTA +++A+V GA++ + +++ +
Sbjct: 148 AAGLRGMVAGQAYDLISEGKEPDERVVEFIHLYKTAAMIKASVKVGAILAEASEEKIKNL 207
Query: 266 RNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLG 325
Y + IGL FQ+VDDILD+ ++E +GK G D+ GK TYP++ GIE +K A EL+
Sbjct: 208 EIYGQSIGLAFQIVDDILDIEGTTEAMGKPKGSDIEKGKMTYPRVFGIEKSKQKAKELID 267
Query: 326 QAIEELAYFEASKAAPLYFLANYIASRQN 354
+A+E L F KA PL +A+YI R +
Sbjct: 268 KALESLTMFN-HKAEPLREIAHYIIKRTS 295
>gi|325294212|ref|YP_004280726.1| polyprenyl synthetase [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325064660|gb|ADY72667.1| Polyprenyl synthetase [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 294
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 126/293 (43%), Positives = 186/293 (63%), Gaps = 5/293 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPV--KIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
+EY+ + +++ + + + PP ++++A++YSL GGKR+RP+LC+A CE+VGG+
Sbjct: 3 LKEYLKERKAIIDREILKYLPSVPPFGKRLYEAVKYSLTVGGKRLRPILCMAGCEVVGGN 62
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
A+ ACA+EMIHT SLIHDDLP +DND RR P + F E+TAILAGDALL+ A
Sbjct: 63 YEEALTPACAIEMIHTYSLIHDDLPAMDNDTLRRGHPTTWYKFDEATAILAGDALLNRAF 122
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG-KDVSLKELEYIHVHKT 240
E ++ DR ++ I E+ A G+ G+V G+ D+ +EG KDV+L+EL +IH HKT
Sbjct: 123 E--VLSQWNFDCDRKIKVIEEISKASGMLGMVLGQQCDMDAEGRKDVTLEELLFIHRHKT 180
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
+L+ A+VV G + GGG+ E+ ++ Y IGL FQ++DD+LDV ++GK G DL
Sbjct: 181 GRLITASVVSGGITGGGSEEEIGTLKKYGDSIGLAFQIIDDVLDVIGDQNKIGKNVGSDL 240
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
GK T+ G++ AK A E + +AI L F A K L LA++I R+
Sbjct: 241 EKGKVTFVTFFGVDGAKRKAREEIEKAISALELFPAKKNELLKKLAHFIVERE 293
>gi|374296391|ref|YP_005046582.1| geranylgeranyl pyrophosphate synthase [Clostridium clariflavum DSM
19732]
gi|359825885|gb|AEV68658.1| geranylgeranyl pyrophosphate synthase [Clostridium clariflavum DSM
19732]
Length = 296
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 126/283 (44%), Positives = 185/283 (65%), Gaps = 5/283 (1%)
Query: 75 VNKALDEAVVLQPPVK--IHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACAL 132
VN L+E + + ++ I+ AMRYSLLAGGKR+RP+L +A C+++GGD +P ACA+
Sbjct: 14 VNNFLEECIKEKDLMEKSIYNAMRYSLLAGGKRLRPVLSLAVCDMLGGDLKEVLPYACAV 73
Query: 133 EMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAG-- 190
EMIHT SLIHDDLP +DND+ RR K +H+VFGE+ AILAGD LL++A E + N +
Sbjct: 74 EMIHTYSLIHDDLPSMDNDDYRRGKLTNHKVFGEALAILAGDGLLNMAFELMLENTSSNC 133
Query: 191 VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVC 250
+ + V+A+ + + GV G++ G+ VDI SE +VS++ LEY+H KT L++A+V+
Sbjct: 134 NNIENKVKAMGYIAKSSGVRGMIGGQVVDIESENNEVSVETLEYMHRLKTGALIKASVIS 193
Query: 251 GAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKL 310
A+I + +++ + NYA IGL FQ+ DDILDV + ++LGK G D ++ K TY +
Sbjct: 194 AAIICNASNEDIQNLENYAEGIGLAFQIKDDILDVEGNIDKLGKNVGSDASNKKTTYVSI 253
Query: 311 MGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
G+E +K E+ AI+ L F KAA L LA Y+ R+
Sbjct: 254 YGLEKSKQMLTEITESAIKSLDSF-GGKAAFLKELAEYLVIRE 295
>gi|404493293|ref|YP_006717399.1| trans-isoprenyl diphosphate synthase [Pelobacter carbinolicus DSM
2380]
gi|77545350|gb|ABA88912.1| trans-isoprenyl diphosphate synthase [Pelobacter carbinolicus DSM
2380]
Length = 296
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 139/291 (47%), Positives = 190/291 (65%), Gaps = 7/291 (2%)
Query: 67 YMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW 124
Y+ + QV+KALD + + P+ +HKAMRYS A GKR+RP+L +A+CE VGG
Sbjct: 6 YLKERRAQVDKALDTYLPGEDVLPISLHKAMRYSTFAAGKRIRPILMMAACEAVGGTVDK 65
Query: 125 AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA---L 181
MPAACA+EMIHT SLIHDDLP +D+D+ RR +P H+V+G++ AILAGDALL+ A L
Sbjct: 66 VMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTCHKVYGDALAILAGDALLTEAFILL 125
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
+ + GVS + R A++ G G+V G+ VD+ SEGK++ L LEYIH KT
Sbjct: 126 SRLGED-GGVSLEAARRVSADIARCAGSMGMVGGQVVDMDSEGKEIDLATLEYIHTRKTG 184
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
L+ A+V GAV+GG ++ +V+ + YA+ GL FQV DDILD+ E LGK G D
Sbjct: 185 ALILASVQSGAVLGGASSEQVDNLGRYAKAAGLAFQVADDILDIVGDQELLGKDVGSDQE 244
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
GKATYP L+G++ A+ A EL A+E L+ F+ +A PL +A+YI R
Sbjct: 245 RGKATYPALLGLDAARDRAKELRDVALESLSGFD-ERAEPLRSIAHYIVDR 294
>gi|210622494|ref|ZP_03293199.1| hypothetical protein CLOHIR_01147 [Clostridium hiranonis DSM 13275]
gi|210154207|gb|EEA85213.1| hypothetical protein CLOHIR_01147 [Clostridium hiranonis DSM 13275]
Length = 295
Score = 238 bits (606), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 130/294 (44%), Positives = 184/294 (62%), Gaps = 7/294 (2%)
Query: 65 EEYMIRK---AEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
EE IR E + K + E V Q I +AM YSL +GGKR+RP+L + +C +VGGD
Sbjct: 5 EELKIRANYAEEIIKKYMPEEVGYQKT--IMEAMNYSLSSGGKRLRPVLTLEACRIVGGD 62
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
A+P A A+EMIHT SLIHDDLP LDND+ RR + +H+VFGE+ AILAGDALL+ A
Sbjct: 63 TDNAIPFAAAIEMIHTYSLIHDDLPALDNDDLRRGRATNHKVFGEAMAILAGDALLNFAY 122
Query: 182 EH-VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKT 240
E + +I +P+R +RA E+ G+ G+V G+ VD+ SE + ++L+YIH +KT
Sbjct: 123 ETMLKESIGKENPERYLRATYEIAKGAGIYGMVGGQVVDVQSENMQIPKEKLDYIHENKT 182
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
A ++ + GA IGG + ++E + +YA IGL FQ+VDDILD+ +LGK G D+
Sbjct: 183 AAMMVGCMRAGAAIGGADEKQMELITDYANKIGLAFQIVDDILDIVGDEAKLGKHVGSDI 242
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K+TYP LMG+E ++ A EL+ A ++ L LA+YI SR +
Sbjct: 243 ENNKSTYPSLMGLEKSREIATELIEDAKRSISKV-TDDTGFLDGLADYILSRDH 295
>gi|188586314|ref|YP_001917859.1| farnesyl-diphosphate synthase [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179351001|gb|ACB85271.1| farnesyl-diphosphate synthase [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 297
Score = 237 bits (605), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 129/307 (42%), Positives = 188/307 (61%), Gaps = 17/307 (5%)
Query: 50 SVFESTDIPLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPL 109
VF + L +EY+ K+E P IH+AM YS+ AGGKR+RPL
Sbjct: 4 DVFMKNNKNLVDQKLQEYLPNKSEY-------------PTAIHEAMHYSVFAGGKRLRPL 50
Query: 110 LCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTA 169
L +A+ +L G ++ +P ACA+E+IHT SLIHDDLP LDND+ RR K +H VFGE A
Sbjct: 51 LTLAAGDLFGANKKTILPFACAIELIHTYSLIHDDLPALDNDDLRRGKSTNHVVFGEDIA 110
Query: 170 ILAGDALLSLALE-HVAVNIAGVSPDRV-VRAIAEMCSAMGVEGLVAGEFVDIASE-GKD 226
ILAGDALL+ A E + + + R + AI+E+ A G +G++ G+ VDI SE D
Sbjct: 111 ILAGDALLNYAFELMTSKGVENFTDARTPLWAISEVAKASGTKGMIGGQVVDIKSEKNAD 170
Query: 227 VSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVT 286
+ L+ + YIH HKT L A++ GA++ + ++E++ YA+ +GL FQVVDDILD+
Sbjct: 171 IDLETVSYIHKHKTGALFTASIRIGAILSQASQADLEKLTTYAQKLGLAFQVVDDILDIE 230
Query: 287 KSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLA 346
++LGKT GKD + KATYPK+MG++ + +A L +A+ ++ + +A L LA
Sbjct: 231 GDEQKLGKTVGKDDDNEKATYPKIMGLKESHEYASRLHHEALTAISDY-GEEANILRELA 289
Query: 347 NYIASRQ 353
N I +R+
Sbjct: 290 NKIVNRE 296
>gi|312110282|ref|YP_003988598.1| polyprenyl synthetase [Geobacillus sp. Y4.1MC1]
gi|311215383|gb|ADP73987.1| Polyprenyl synthetase [Geobacillus sp. Y4.1MC1]
Length = 297
Score = 237 bits (604), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 125/292 (42%), Positives = 184/292 (63%), Gaps = 3/292 (1%)
Query: 65 EEYMIRKAEQVNKALDEAVV-LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
E ++ ++ +++ AL + + P I +AM YSL AGGKR+RPLL A+ G +
Sbjct: 7 ERFLQQQKQRLENALPHYITRMAAPETIKRAMSYSLEAGGKRIRPLLLFATLHSFGKEPD 66
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
+P ACA+EMIHT SLIHDDLP +DND+ RR KP +H+VFGE+ AILAGD LL+ A +
Sbjct: 67 IGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQV 126
Query: 184 VA-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAK 242
+A N A +SP +R I E+ A G EG+VAG+ DI SEGK +SL++LEYIH HKT K
Sbjct: 127 IAEANDARISPMTKIRLIEELAKAAGPEGMVAGQVADIESEGKQLSLEQLEYIHRHKTGK 186
Query: 243 LLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
+L+ +V+ GA++ N ++ ++ +A +GL FQ+ DDILD+ E++GK G D+ +
Sbjct: 187 MLQYSVLAGALLADANNEQLRQLDLFASHLGLAFQIRDDILDIEGLEEKMGKRVGSDMEN 246
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TYP L+ I AK + +A L E + L ++ + +A+R +
Sbjct: 247 KKVTYPSLLTIAGAKEKLSFHIAEAKRYLQKAEID-GSVLTYICDLVATRDH 297
>gi|261416040|ref|YP_003249723.1| polyprenyl synthetase [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|385790913|ref|YP_005822036.1| geranylgeranyl diphosphate synthase [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|261372496|gb|ACX75241.1| Polyprenyl synthetase [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|302326253|gb|ADL25454.1| geranylgeranyl diphosphate synthase [Fibrobacter succinogenes
subsp. succinogenes S85]
Length = 295
Score = 237 bits (604), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 128/290 (44%), Positives = 184/290 (63%), Gaps = 10/290 (3%)
Query: 65 EEYMIRKAEQVNKALDEAV--VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
+EY+ R A+ DE + V P ++H+AMRYS+ AGGKR+RP L A+ ++ GG
Sbjct: 12 QEYLARIAKDAEAKFDEHLPPVKDRPCRLHEAMRYSMFAGGKRLRPGLAKATFDMFGGKG 71
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
A ALEM+HT SLIHDDLP +DND+ RR K SH+ FGE+TA++AGDAL A E
Sbjct: 72 EKIWLATSALEMLHTFSLIHDDLPCVDNDDYRRGKLTSHKKFGEATAVMAGDALCIHAFE 131
Query: 183 HVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAK 242
+ G + + +AI + +G G++ GE DI EGK V L+ ++YIH HKTA
Sbjct: 132 -----MMGKTGN--AKAIELLAHLLGTYGMIGGEMTDIECEGKTVDLEIVDYIHYHKTAA 184
Query: 243 LLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
L+EA+++ GA++ + ++E +RNY R IGL FQ+VDDILD+ ++EELGK AG D+
Sbjct: 185 LIEASLLVGAMLAKASEKDMEIIRNYGRSIGLAFQIVDDILDIVSTTEELGKDAGSDIEK 244
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
GKATYP ++G+E ++ A EL ++I+ L + L +A YI +R
Sbjct: 245 GKATYPSIVGLEKSRERARELYEESIKALDGL-TCDTSILRSIAAYIITR 293
>gi|138895964|ref|YP_001126417.1| farnesyl diphosphate synthase [Geobacillus thermodenitrificans
NG80-2]
gi|196248855|ref|ZP_03147555.1| Polyprenyl synthetase [Geobacillus sp. G11MC16]
gi|134267477|gb|ABO67672.1| Farnesyl diphosphate synthase [Geobacillus thermodenitrificans
NG80-2]
gi|196211731|gb|EDY06490.1| Polyprenyl synthetase [Geobacillus sp. G11MC16]
Length = 297
Score = 237 bits (604), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 119/261 (45%), Positives = 174/261 (66%), Gaps = 2/261 (0%)
Query: 59 LPTFPFEEYMIRKAEQVNKALDEAVV-LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCEL 117
+ + E+++ + + V AL + L P + KAM YSL AGGKR+RPLL +++ +
Sbjct: 1 MASLEIEQFLNEQKQAVEAALSRYIAQLHGPETLKKAMAYSLEAGGKRIRPLLLLSTIQA 60
Query: 118 VGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALL 177
+G + S +P ACA+EMIHT SLIHDDLP +DND+ RR KP +H+VFGE+ AILAGD LL
Sbjct: 61 LGQNPSLGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLL 120
Query: 178 SLALEHVA-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIH 236
+ A + +A ++ V D ++ IAE+ A G EG+VAG+ D+ EGK ++L ELEYIH
Sbjct: 121 TYAFQLIAEIHDERVPVDVRLQLIAELAKAAGPEGMVAGQVADMEGEGKTLALAELEYIH 180
Query: 237 VHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTA 296
HKT K+L+ +V GA++GG +A ++ + +A +GL FQ+ DDILD+ + E++GK
Sbjct: 181 RHKTGKMLQYSVHAGALLGGADARQMRELNEFAAHLGLAFQIRDDILDIEGTEEKIGKRV 240
Query: 297 GKDLASGKATYPKLMGIENAK 317
G D + KATYP L+ + AK
Sbjct: 241 GSDRENHKATYPALLSLAGAK 261
>gi|585326|sp|Q08291.1|ISPA_GEOSE RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
AltName: Full=Geranyltranstransferase
gi|391610|dbj|BAA02551.1| farnesyl diphosphate synthase [Geobacillus stearothermophilus]
Length = 297
Score = 237 bits (604), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 118/261 (45%), Positives = 171/261 (65%), Gaps = 2/261 (0%)
Query: 59 LPTFPFEEYMIRKAEQVNKALDEAV-VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCEL 117
+ E+++ + + V AL + L+ P K+ KAM YSL AGGKR+RPLL +++
Sbjct: 1 MAQLSVEQFLNEQKQAVETALSRYIERLEGPAKLKKAMAYSLEAGGKRIRPLLLLSTVRA 60
Query: 118 VGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALL 177
+G D + +P ACA+EMIHT SLIHDDLP +DND+ RR KP +H+VFGE+ AILAGD LL
Sbjct: 61 LGKDPAVGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLL 120
Query: 178 SLALEHVA-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIH 236
+ A + + ++ + P +R I + A G EG+VAG+ D+ EGK ++L ELEYIH
Sbjct: 121 TYAFQLITEIDDERIPPSVRLRLIERLAKAAGPEGMVAGQAADMEGEGKTLTLSELEYIH 180
Query: 237 VHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTA 296
HKT K+L+ +V GA+IGG +A + + +A +GL FQ+ DDILD+ + E++GK
Sbjct: 181 RHKTGKMLQYSVHAGALIGGADARQTRELDEFAAHLGLAFQIRDDILDIEGAEEKIGKPV 240
Query: 297 GKDLASGKATYPKLMGIENAK 317
G D ++ KATYP L+ + AK
Sbjct: 241 GSDQSNNKATYPALLSLAGAK 261
>gi|47076770|dbj|BAD18313.1| geranyltranstransferase [Geobacillus stearothermophilus]
Length = 319
Score = 236 bits (603), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 170/255 (66%), Gaps = 2/255 (0%)
Query: 65 EEYMIRKAEQVNKALDEAV-VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
E+++ + + V AL + L+ P K+ KAM YSL AGGKR+RPLL +++ +G D +
Sbjct: 7 EQFLNEQKQAVETALSRYIERLEGPAKLKKAMAYSLEAGGKRIRPLLLLSTVRALGKDPA 66
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
+P ACA+EMIHT SLIHDDLP +DND+ RR KP +H+VFGE+ AILAGD LL+ A +
Sbjct: 67 VGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQL 126
Query: 184 -VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAK 242
V ++ + P +R I + A G EG+VAG+ D+ EGK ++L ELEYIH HKT K
Sbjct: 127 IVEIDDERIPPSVRLRLIERLAKAAGPEGMVAGQAADMEGEGKTLTLSELEYIHRHKTGK 186
Query: 243 LLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
+L+ +V GA+IGG +A + + +A +GL FQ+ DDILD+ + E++GK G D ++
Sbjct: 187 MLQYSVHAGALIGGADARQTRELDEFAAHLGLAFQIRDDILDIEGAEEKIGKPVGSDQSN 246
Query: 303 GKATYPKLMGIENAK 317
KATYP L+ + AK
Sbjct: 247 NKATYPALLSLAGAK 261
>gi|334341587|ref|YP_004546567.1| polyprenyl synthetase [Desulfotomaculum ruminis DSM 2154]
gi|334092941|gb|AEG61281.1| Polyprenyl synthetase [Desulfotomaculum ruminis DSM 2154]
Length = 296
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 123/263 (46%), Positives = 172/263 (65%), Gaps = 10/263 (3%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQP----PVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
+E + R+A V++AL++ L P P IH+AMRYS+ AGGKR+RP+L +A+ E VG
Sbjct: 3 IKEELKRRARLVDEALEK--YLPPDHEHPAVIHEAMRYSVFAGGKRLRPILVLAAAEAVG 60
Query: 120 GDESWA---MPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDAL 176
DE+ A MP ACALE+IHT SL+HDDLP +DND+ RR +P +H+V+GE+ AILAGDAL
Sbjct: 61 -DEAGAASAMPVACALELIHTYSLVHDDLPAMDNDDFRRGRPTNHKVYGEAMAILAGDAL 119
Query: 177 LSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIH 236
L+ A E + + SP V R + E+ A G +GL+ G+ VD SE K V LEYIH
Sbjct: 120 LTTAFELMGQSAGKFSPQAVNRVVVEIAQAAGSQGLIGGQVVDTLSENKKVEASVLEYIH 179
Query: 237 VHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTA 296
HKT L AA+ GA++ G + +++ + YA +GL FQ+ DD+LD+ E++GK
Sbjct: 180 RHKTGALFRAAIRSGAILNGASEEQLQALTVYAEQMGLAFQIKDDLLDIEGEQEKIGKPV 239
Query: 297 GKDLASGKATYPKLMGIENAKSF 319
G D+ + KATYP L G+E A+
Sbjct: 240 GSDVKNQKATYPALYGMEKARKM 262
>gi|332653017|ref|ZP_08418762.1| geranyltranstransferase [Ruminococcaceae bacterium D16]
gi|332518163|gb|EGJ47766.1| geranyltranstransferase [Ruminococcaceae bacterium D16]
Length = 293
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 123/264 (46%), Positives = 172/264 (65%), Gaps = 8/264 (3%)
Query: 91 IHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDN 150
+ +AM YSL+AGGKR+RP+L + SC + GGD A+P ACA+EMIHT SLIHDDLP +D+
Sbjct: 34 LREAMEYSLMAGGKRIRPVLVLESCRMCGGDPEVALPFACAVEMIHTYSLIHDDLPAMDD 93
Query: 151 DERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVE 210
DE RR +P +H V+GE+TAILAGD LL+ A + + A ++ +VV A+A + A G +
Sbjct: 94 DELRRGRPTNHMVYGEATAILAGDGLLTAAFQ--TLTQAQLTAQQVVDAVACLSLAAGPD 151
Query: 211 GLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYAR 270
G+V G+ +D+A EG+ ++ ELE + KT L+ AA G + GG+ + E VR YA+
Sbjct: 152 GMVGGQALDMAGEGRSLTRAELEQLQSLKTGALIAAAAELGCIAAGGSPEQRESVRQYAQ 211
Query: 271 CIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEE 330
C+G FQV DDILDVT + EELGK G D K T+ L+G++ ++ EL QA+
Sbjct: 212 CLGRAFQVQDDILDVTSTDEELGKPTGSDREKEKNTFVSLLGLDRSRELVAELTAQAVSA 271
Query: 331 LAYFEASKAAP--LYFLANYIASR 352
L F A+P L +LAN +A R
Sbjct: 272 LDGF----ASPDFLVWLANTLAQR 291
>gi|431794334|ref|YP_007221239.1| geranylgeranyl pyrophosphate synthase [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430784560|gb|AGA69843.1| geranylgeranyl pyrophosphate synthase [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 289
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 130/263 (49%), Positives = 180/263 (68%), Gaps = 5/263 (1%)
Query: 93 KAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDE 152
++M YSL AGGKR+RP+L +A+ + VGGDE +PAACALE+IHT SLIHDDLP +DND+
Sbjct: 29 ESMNYSLAAGGKRIRPVLALAAAKAVGGDEESILPAACALELIHTYSLIHDDLPAMDNDD 88
Query: 153 RRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGL 212
RR + ++H+ FG AILAGDALL+ A E +A +I GV+P+R +R I E+ A G EG+
Sbjct: 89 YRRGRLSNHKAFGVGQAILAGDALLTYAFELLAQSITGVTPERQLRVIREVAQAAGPEGM 148
Query: 213 VAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCI 272
V G+ +D+A+E KD++L ELE +H KT +L + GA++ GG ++E + NYA+ I
Sbjct: 149 VGGQVLDLAAEEKDLALAELERVHRLKTGAMLVVSARLGAILAGGTEEKIEALTNYAQAI 208
Query: 273 GLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELA 332
GL FQ+ DDILD+ S+ LGK A D+ KATYP LMGIE AK+ E + + E A
Sbjct: 209 GLAFQIRDDILDLEGDSKSLGKPAQSDIRQHKATYPSLMGIEGAKA---EFMNKTDEAHA 265
Query: 333 YFE--ASKAAPLYFLANYIASRQ 353
E ++ L+ LA+YIA R+
Sbjct: 266 ALETLGERSGFLHDLADYIAQRK 288
>gi|224369661|ref|YP_002603825.1| putative polyprenyl synthetase [Desulfobacterium autotrophicum
HRM2]
gi|223692378|gb|ACN15661.1| putative polyprenyl synthetase [Desulfobacterium autotrophicum
HRM2]
Length = 316
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 131/303 (43%), Positives = 186/303 (61%), Gaps = 8/303 (2%)
Query: 59 LPTFPFEEYMIRKAEQVNKALDEAV-VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCEL 117
+ F F+ Y+ + VN+ L + L P ++ AM +SL+AGGKR+RP+LC+A+CE
Sbjct: 13 MDNFDFKAYLKARQTLVNERLGAILGSLDPRRELTCAMGHSLMAGGKRLRPILCLAACEA 72
Query: 118 VGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALL 177
A+PAACALEMIHT SL+HDDLP +DND+ RR P H FGESTAILAGD LL
Sbjct: 73 CSAPLEPALPAACALEMIHTYSLVHDDLPAMDNDDLRRGIPTCHRAFGESTAILAGDGLL 132
Query: 178 SLALEHVAV--NIAGVSPDRVVR--AIAEMCSAMGVEGLVAGEFVDIASEGKD---VSLK 230
+ A + ++ N+ V PD VR +A + A G+ G+V G+ +D+ + D SL+
Sbjct: 133 THAFQILSRPENLFKVFPDPGVRLELVAIISDAAGINGMVEGQMLDMLLQNADETVTSLE 192
Query: 231 ELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSE 290
L IH KT ++ A+VV GAV G + +E + YA IGL FQ+VDDILDV
Sbjct: 193 LLTQIHTLKTGGMIRASVVAGAVSAGADNAMIESLAVYAEKIGLAFQIVDDILDVEGDPT 252
Query: 291 ELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIA 350
+GKTAG D+ + K T+P MG+E ++ +A E++ +A++ L F+ K PL +A YI
Sbjct: 253 VMGKTAGSDVDNRKMTFPSFMGLEASRKYAQEIINEAVKALDLFDEKKTLPLKAIAAYIL 312
Query: 351 SRQ 353
R+
Sbjct: 313 QRK 315
>gi|167628424|ref|YP_001678923.1| geranylgeranyl pyrophosphate synthase [Heliobacterium modesticaldum
Ice1]
gi|167591164|gb|ABZ82912.1| geranylgeranyl pyrophosphate synthase [Heliobacterium modesticaldum
Ice1]
Length = 296
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 137/291 (47%), Positives = 189/291 (64%), Gaps = 11/291 (3%)
Query: 73 EQVNKALDEAVV-------LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWA 125
+Q+N +D A+ + PPV IHKAMRYSL AGGKR+RP+L +A C VGGDE
Sbjct: 8 KQLNMKIDAALSRYMPAEDVAPPV-IHKAMRYSLFAGGKRLRPVLVLAGCRAVGGDEESV 66
Query: 126 MPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVA 185
M AACALEMIHT SLIHDDLP +D+D+ RR P +H VFGE+TAILAGD LL+ A +A
Sbjct: 67 MAAACALEMIHTYSLIHDDLPAMDDDDLRRGMPTNHVVFGEATAILAGDGLLTRAFGVLA 126
Query: 186 VN--IAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
G SP V++ IAE+ A G G++ G+ +D+ SE K + + + YIH HKT L
Sbjct: 127 EEGLRCGRSPALVLQVIAELADAAGSMGMIGGQVMDMESENKQIDVATMAYIHAHKTGAL 186
Query: 244 LEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASG 303
+ A++ GA++GGG+ +VE + Y +GL FQ+ DD+LD+ E++GK G D+ +
Sbjct: 187 IRASLRIGALLGGGSVEQVEALSRYGDHLGLAFQITDDLLDIQGDPEKIGKPVGSDVKNN 246
Query: 304 KATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
KATYP L+G+E A+ A ++ A++ LA F+ KA L LA Y+ R+N
Sbjct: 247 KATYPALLGLEKARQEAERVVQAALDSLAGFD-EKAELLRELAQYLLVREN 296
>gi|125973349|ref|YP_001037259.1| farnesyl-diphosphate synthase [Clostridium thermocellum ATCC 27405]
gi|125713574|gb|ABN52066.1| Polyprenyl synthetase [Clostridium thermocellum ATCC 27405]
Length = 295
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 127/296 (42%), Positives = 191/296 (64%), Gaps = 4/296 (1%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQ--PPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
F++ + + A+ VN+ LD +V P ++ AMRYSL+AGGKR+RP+L +A C+++G
Sbjct: 1 MEFKQQLEKYADIVNEYLDRCIVQNELPEKSLYSAMRYSLMAGGKRLRPVLSLAVCDMLG 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
G +P ACA+EMIHT SLIHDDLP +DND+ RR +P +H+V+GE+ AILAGD LL+L
Sbjct: 61 GSVEQVLPFACAVEMIHTYSLIHDDLPAMDNDDFRRGRPTNHKVYGEALAILAGDGLLNL 120
Query: 180 ALEHVAVN-IAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
A E + N I +R +A A + A G+ G++AG+ +D+ SEGK V + L +H
Sbjct: 121 AFEIMLENIIKNGDMERKSKAAAVIAKAAGMNGMIAGQVIDLESEGKQVDNEILNRMHRL 180
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT L++A VV A++ G +A +++++ +A +GL FQ+ DDILDV SSE+LGK G
Sbjct: 181 KTGALIKAPVVSAAILCGADADDIQKLDEFAENLGLAFQIKDDILDVEGSSEKLGKKVGS 240
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
D + K+TY + G+E +K ++ +A++ L F KA L LA Y+ R+N
Sbjct: 241 DADNNKSTYVTVYGLEKSKEILSDVTKKAVDALEKF-GEKADFLRSLAKYLLEREN 295
>gi|281417549|ref|ZP_06248569.1| Polyprenyl synthetase [Clostridium thermocellum JW20]
gi|281408951|gb|EFB39209.1| Polyprenyl synthetase [Clostridium thermocellum JW20]
Length = 298
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 127/294 (43%), Positives = 191/294 (64%), Gaps = 4/294 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQ--PPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F++ + + A+ VN+ LD +V P ++ AMRYSL+AGGKR+RP+L +A C+++GG
Sbjct: 6 FKQQLEKYADIVNEYLDRCIVQNELPEKSLYSAMRYSLMAGGKRLRPVLSLAVCDMLGGS 65
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
+P ACA+EMIHT SLIHDDLP +DND+ RR +P +H+V+GE+ AILAGD LL+LA
Sbjct: 66 VEQVLPFACAVEMIHTYSLIHDDLPAMDNDDFRRGRPTNHKVYGEALAILAGDGLLNLAF 125
Query: 182 EHVAVN-IAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKT 240
E + N I +R +A A + A G+ G++AG+ +D+ SEGK V + L +H KT
Sbjct: 126 EIMLENIIKNGDMERKSKAAAVIAKAAGMNGMIAGQVIDLESEGKQVDNEILNRMHRLKT 185
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
L++A VV A++ G +A +++++ +A +GL FQ+ DDILDV SSE+LGK G D
Sbjct: 186 GALIKAPVVSAAILCGADADDIQKLDEFAENLGLAFQIKDDILDVEGSSEKLGKKVGSDA 245
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K+TY + G+E +K ++ +A++ L F KA L LA Y+ R+N
Sbjct: 246 DNNKSTYVTVYGLEKSKEILSDVTKKAVDALEKF-GEKADFLRSLAKYLLEREN 298
>gi|256005455|ref|ZP_05430418.1| Polyprenyl synthetase [Clostridium thermocellum DSM 2360]
gi|385778739|ref|YP_005687904.1| polyprenyl synthetase [Clostridium thermocellum DSM 1313]
gi|419722103|ref|ZP_14249252.1| Polyprenyl synthetase [Clostridium thermocellum AD2]
gi|419724850|ref|ZP_14251907.1| Polyprenyl synthetase [Clostridium thermocellum YS]
gi|255990595|gb|EEU00714.1| Polyprenyl synthetase [Clostridium thermocellum DSM 2360]
gi|316940419|gb|ADU74453.1| Polyprenyl synthetase [Clostridium thermocellum DSM 1313]
gi|380771739|gb|EIC05602.1| Polyprenyl synthetase [Clostridium thermocellum YS]
gi|380781857|gb|EIC11506.1| Polyprenyl synthetase [Clostridium thermocellum AD2]
Length = 298
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 127/294 (43%), Positives = 191/294 (64%), Gaps = 4/294 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQ--PPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F++ + + A+ VN+ LD +V P ++ AMRYSL+AGGKR+RP+L +A C+++GG
Sbjct: 6 FKQQLEKYADIVNEYLDRCIVKNELPEKSLYSAMRYSLMAGGKRLRPVLSLAVCDMLGGS 65
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
+P ACA+EMIHT SLIHDDLP +DND+ RR +P +H+V+GE+ AILAGD LL+LA
Sbjct: 66 VEQVLPFACAVEMIHTYSLIHDDLPAMDNDDFRRGRPTNHKVYGEALAILAGDGLLNLAF 125
Query: 182 EHVAVN-IAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKT 240
E + N I +R +A A + A G+ G++AG+ +D+ SEGK V + L +H KT
Sbjct: 126 EIMLENIIKNGDMERKSKAAAVIAKAAGMNGMIAGQVIDLESEGKQVDNEILNRMHRLKT 185
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
L++A VV A++ G +A +++++ +A +GL FQ+ DDILDV SSE+LGK G D
Sbjct: 186 GALIKAPVVSAAILCGADADDIQKLDEFAENLGLAFQIKDDILDVEGSSEKLGKKVGSDA 245
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K+TY + G+E +K ++ +A++ L F KA L LA Y+ R+N
Sbjct: 246 DNNKSTYVTVYGLEKSKEILSDVTKKAVDALEKF-GEKADFLRSLAKYLLEREN 298
>gi|336234744|ref|YP_004587360.1| polyprenyl synthetase [Geobacillus thermoglucosidasius C56-YS93]
gi|335361599|gb|AEH47279.1| Polyprenyl synthetase [Geobacillus thermoglucosidasius C56-YS93]
Length = 297
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 124/292 (42%), Positives = 184/292 (63%), Gaps = 3/292 (1%)
Query: 65 EEYMIRKAEQVNKALDEAVV-LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
E ++ ++ +++ AL + + P I +AM YSL AGGKR+RPLL A+ G +
Sbjct: 7 ERFLQQQKQRLENALPHYITRMAAPETIKRAMSYSLEAGGKRIRPLLLFATLHSFGKEPD 66
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
+P ACA+EMIHT SLIHDDLP +DND+ RR KP +H+VFGE+ AILAGD LL+ A +
Sbjct: 67 IGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQV 126
Query: 184 VA-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAK 242
+A + A +SP +R I E+ A G EG+VAG+ DI SEGK +SL++LEYIH HKT K
Sbjct: 127 IAEADDARISPMTKIRLIEELAKAAGPEGMVAGQVADIESEGKQLSLEQLEYIHRHKTGK 186
Query: 243 LLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
+L+ +V+ GA++ N ++ ++ +A +GL FQ+ DDILD+ E++GK G D+ +
Sbjct: 187 MLQYSVLAGALLADANNEQLRQLDLFASHLGLAFQIRDDILDIEGLEEKMGKRVGSDIEN 246
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TYP L+ I AK + +A L E + L ++ + +A+R +
Sbjct: 247 KKVTYPSLLTIAGAKEKLSFHIAEAKRYLQKAEID-GSVLTYICDLVATRDH 297
>gi|323702778|ref|ZP_08114438.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574]
gi|333924276|ref|YP_004497856.1| polyprenyl synthetase [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323532295|gb|EGB22174.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574]
gi|333749837|gb|AEF94944.1| Polyprenyl synthetase [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 294
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 119/254 (46%), Positives = 164/254 (64%), Gaps = 2/254 (0%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
+++ + A V+KAL+E + P IH+AMRYS+ AGGKR+RP+L IA+ E VGG
Sbjct: 3 YQDQLKSYALAVDKALNEYLPAAEVYPSTIHEAMRYSVFAGGKRLRPILTIAAAEAVGGS 62
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
MP ACALE+IHT SL+HDDLP +DND+ RR +P +H+V+GE+ AIL GDALL+ A
Sbjct: 63 MEQVMPVACALELIHTYSLVHDDLPAMDNDDFRRGRPTNHKVYGEAMAILVGDALLTQAF 122
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
E +A VSPD+V + E+ A G GL+ G+ VD SE + + + LEYIH HKT
Sbjct: 123 EVIAGTAVKVSPDKVNQVTLEIARAAGSLGLIGGQVVDTLSEDQVIDGQVLEYIHRHKTG 182
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
L AV GA++ G +A E+ + YA +GL FQ+ DD+LD+ ++GK G D+
Sbjct: 183 ALFRVAVRAGAILSGASAEELAALTTYAEQMGLAFQIKDDLLDIEGDEAKIGKPVGSDVK 242
Query: 302 SGKATYPKLMGIEN 315
+ KATYP L G+E
Sbjct: 243 NKKATYPALYGLEK 256
>gi|423719308|ref|ZP_17693490.1| geranyl/polyprenyl transtransferase [Geobacillus thermoglucosidans
TNO-09.020]
gi|383368211|gb|EID45486.1| geranyl/polyprenyl transtransferase [Geobacillus thermoglucosidans
TNO-09.020]
Length = 297
Score = 234 bits (597), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 124/292 (42%), Positives = 183/292 (62%), Gaps = 3/292 (1%)
Query: 65 EEYMIRKAEQVNKALDEAVV-LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
E ++ ++ +++ AL + + P I +AM YSL AGGKR+RPLL A+ G +
Sbjct: 7 ERFLQQQKQRLENALPHYITRMAAPETIKRAMSYSLEAGGKRIRPLLLFATLHSFGKEPD 66
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
+P ACA+EMIHT SLIHDDLP +DND+ RR KP +H+VFGE+ AILAGD LL+ A +
Sbjct: 67 IGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQV 126
Query: 184 VA-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAK 242
+A + A +SP +R I E+ A G EG+VAG+ DI SEGK +SL++LEYIH HKT K
Sbjct: 127 IAEADDARISPMTKIRLIEELAKAAGPEGMVAGQVADIESEGKQLSLEQLEYIHRHKTGK 186
Query: 243 LLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
+L+ +V+ GA++ N ++ + +A +GL FQ+ DDILD+ E++GK G D+ +
Sbjct: 187 MLQYSVLAGALLADANNEQLRHLDLFASHLGLAFQIRDDILDIEGLEEKMGKRVGSDIEN 246
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TYP L+ I AK + +A L E + L ++ + +A+R +
Sbjct: 247 KKVTYPSLLTIAGAKEKLSFHIAEAKRYLQKAEID-GSVLTYICDLVATRDH 297
>gi|239827666|ref|YP_002950290.1| polyprenyl synthetase [Geobacillus sp. WCH70]
gi|239807959|gb|ACS25024.1| Polyprenyl synthetase [Geobacillus sp. WCH70]
Length = 297
Score = 234 bits (597), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 122/292 (41%), Positives = 185/292 (63%), Gaps = 3/292 (1%)
Query: 65 EEYMIRKAEQVNKALDEAVV-LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
E+++ ++ +++ ++L + L P I +AM YSL AGGKR+RPLL A+ G +
Sbjct: 7 EQFLQQQKQRLEESLPHYIARLNAPGTIKRAMSYSLEAGGKRIRPLLLFATLHSFGKEPD 66
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
+P ACA+EMIHT SLIHDDLP +DND+ RR KP +H+VFGE+ AILAGD LL+ A +
Sbjct: 67 IGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQV 126
Query: 184 VA-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAK 242
+A ++ A + P +R I E+ A G EG+VAG+ DI EGK +SL++LEYIH HKT K
Sbjct: 127 IAEMSDARIVPATKIRLIEELAKAAGPEGMVAGQVADIEGEGKQLSLEQLEYIHRHKTGK 186
Query: 243 LLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
+L+ +V+ GA++ ++ + +A +GL FQ+ DDILD+ S E++GK G D+ +
Sbjct: 187 MLQYSVLAGALLADAKDEQLHHLHTFASHLGLAFQIRDDILDIEGSEEKIGKRVGSDIEN 246
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TYP L+ I AK + +A L E + + L ++ + +A+R +
Sbjct: 247 KKVTYPSLLTIAGAKEKLSFHIAEAKRYLQKAEINDSV-LSYICDLVATRDH 297
>gi|85859630|ref|YP_461832.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl
pyrophosphate synthetase [Syntrophus aciditrophicus SB]
gi|85722721|gb|ABC77664.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl
pyrophosphate synthetase [Syntrophus aciditrophicus SB]
Length = 308
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 127/302 (42%), Positives = 188/302 (62%), Gaps = 7/302 (2%)
Query: 58 PLPTFPFEEYMIRKAEQVNKALDEAV--VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASC 115
P Y+ K ++++A+D + + P ++ KAMRYSL AGGKR+RP+LC+A+
Sbjct: 7 PESGLDLNAYIKEKKLRIDEAIDRYLPGEEESPGELFKAMRYSLFAGGKRIRPILCLAAA 66
Query: 116 ELVGGDES--WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAG 173
E VG S +P ACALE IHT SLIHDDLP +DND+ RR KP SH+VFG++ AILAG
Sbjct: 67 EAVGTSVSSDCLLPVACALEYIHTYSLIHDDLPAMDNDDYRRGKPTSHKVFGDALAILAG 126
Query: 174 DALLSLALEHVAVNI--AGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKE 231
DALL+ A E + G++P+ ++R I E+ +A G G+V G+ D+ +EGK +L
Sbjct: 127 DALLTEAFELMTRTDFHTGLAPEILLRVIREIAAAAGAFGMVGGQVEDLRAEGKPGNLDT 186
Query: 232 LEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEE 291
L IH KT ++ ++ GA++ GG+ V + +Y IGL+FQ+ DDIL+V
Sbjct: 187 LNRIHNRKTGAMIVVSLRAGAILSGGSEQAVSALTDYGHKIGLVFQIADDILNVEGDRTV 246
Query: 292 LGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIAS 351
LGK+ G D + GK T+P LMG+E ++ A L+ +A+ +L F+ ++A PL +A Y
Sbjct: 247 LGKSTGSDASRGKMTFPLLMGLEPSRQKAFALVEEALRDLDGFD-NRATPLRLMARYFVE 305
Query: 352 RQ 353
R+
Sbjct: 306 RR 307
>gi|5631297|dbj|BAA82614.1| farnesyl diphosphate synthase (SelFPS) [Synechococcus elongatus]
Length = 300
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 127/282 (45%), Positives = 181/282 (64%), Gaps = 4/282 (1%)
Query: 73 EQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACAL 132
E +N+ L A V P ++H+AMRY++L GGKRVRPLLC A+ E+ G + AA AL
Sbjct: 21 EALNRLLPPAEV--APQRLHQAMRYAVLGGGKRVRPLLCYAAGEVSGAELERLSTAAAAL 78
Query: 133 EMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVS 192
E+IH SL+HDDLP +D+D RR KP H + E+TA+LAGD+L SLA + +A S
Sbjct: 79 ELIHVYSLVHDDLPCMDDDVLRRGKPTCHVEYDEATALLAGDSLQSLAFQLLAEYRVADS 138
Query: 193 PDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGA 252
P +R + + A G G+ G+ +D+ + GK ++L ELE++H+HKT L+ A+V+ GA
Sbjct: 139 PQTQLRMLEHLARAAGSRGMAGGQAIDLEATGKTLTLPELEFMHIHKTGALIRASVILGA 198
Query: 253 VIGGGNAI-EVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLM 311
G A +++R+ ++A+ IGL FQVVDD+LD ++ LGKTAGKD GK TY +
Sbjct: 199 NCGRALASKDMDRLDHFAKRIGLAFQVVDDVLDAQSTTATLGKTAGKDARQGKPTYVSTV 258
Query: 312 GIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
G+E A++ A EL +A+E LA F +A L LA YI SR+
Sbjct: 259 GVEAARAMAQELKREAVESLAPF-GERARRLRELAEYIVSRE 299
>gi|315924280|ref|ZP_07920504.1| geranyltranstransferase [Pseudoramibacter alactolyticus ATCC 23263]
gi|315622441|gb|EFV02398.1| geranyltranstransferase [Pseudoramibacter alactolyticus ATCC 23263]
Length = 309
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 133/309 (43%), Positives = 183/309 (59%), Gaps = 7/309 (2%)
Query: 51 VFESTDIPLPTFPFEEYMIRKAEQVNKALDEAVV--LQPPVKIHKAMRYSLLAGGKRVRP 108
+ +S + + T F + +K Q+ L + V P I AM+YSL AGGKRVRP
Sbjct: 1 MHQSKEDRVRTAKFANRLTKKGHQIEAYLTDCFVGPFDAPDIIVSAMKYSLFAGGKRVRP 60
Query: 109 LLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGEST 168
+L + +C + GGDE A+P ACA+EMIHT SLIHDDLP +DND+ RR +P +H+V+GE+
Sbjct: 61 ILLMETCAMFGGDERVAIPFACAIEMIHTYSLIHDDLPAMDNDDLRRGEPTNHKVYGENI 120
Query: 169 AILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMC---SAMGVEGLVAGEFVDIASEGK 225
AILAGDALL+ A+E I + P R IA + A GV G++ G+ D+ +E
Sbjct: 121 AILAGDALLNAAVETAVEGIETMEPAERARGIAALSLLMRAAGVNGMIGGQTGDLLAEDD 180
Query: 226 D-VSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILD 284
D ++ ++ YIH HKT LL AAV+ GAV+ G + E + +RNY IG+ FQVVDDILD
Sbjct: 181 DAINEDKIVYIHAHKTGALLTAAVLIGAVLAGASEDEQQALRNYGSAIGMAFQVVDDILD 240
Query: 285 VTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYF 344
V + LGK G D K T+ L G+E+AK A E +AI LA + L
Sbjct: 241 VESETAVLGKPVGSDAEESKTTFVSLFGLESAKVKAEEYHQEAIAALAGIQ-RDTIFLEE 299
Query: 345 LANYIASRQ 353
+A++I R
Sbjct: 300 MADFICRRN 308
>gi|347755955|ref|YP_004863519.1| farnesyl-diphosphate synthase [Candidatus Chloracidobacterium
thermophilum B]
gi|347588473|gb|AEP13003.1| farnesyl-diphosphate synthase [Candidatus Chloracidobacterium
thermophilum B]
Length = 292
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 120/257 (46%), Positives = 166/257 (64%), Gaps = 5/257 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAV--VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
E Y K +VN+ LD+ + V PP +IH+AMRYSL+AGGKR+RP+L +A+ E+ GG
Sbjct: 2 IEAYFAEKVPEVNRWLDQLMPPVTTPPPRIHEAMRYSLMAGGKRLRPILVLAAGEVFGGA 61
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
P ACA EM+HT SLIHDDLP +DND+ RR P H+ F E+TAILAGD L++ A
Sbjct: 62 PERLYPVACAFEMVHTYSLIHDDLPAMDNDDLRRGMPTCHKQFDEATAILAGDGLMTHAF 121
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMG-VEGLVAGEFVDIASEGKDVSLKELEYIHVHKT 240
+A A ++ VR I E+ G VEG++AG+ VD+ +EGK + L +IH KT
Sbjct: 122 RILAEMDA--PAEQKVRVIRELAVGSGTVEGMIAGQIVDLEAEGKPIDAGRLAFIHRAKT 179
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
L+ A+VCG ++ ++ + Y +GL FQ+ DDILD T ++E+LGKT GKD
Sbjct: 180 GALIRGALVCGGIVADAAESDLALLSAYGDRVGLAFQIADDILDETATAEQLGKTPGKDA 239
Query: 301 ASGKATYPKLMGIENAK 317
A+GKATYP L G+E ++
Sbjct: 240 AAGKATYPALYGLEASR 256
>gi|375009473|ref|YP_004983106.1| geranyltranstransferase [Geobacillus thermoleovorans CCB_US3_UF5]
gi|359288322|gb|AEV20006.1| Geranyltranstransferase [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 297
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 119/261 (45%), Positives = 171/261 (65%), Gaps = 2/261 (0%)
Query: 59 LPTFPFEEYMIRKAEQVNKALDEAVV-LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCEL 117
+ E+++ + V AL + L+ P + KAM YSL AGGKR+RPLL +A+ +
Sbjct: 1 MAQLSVEQFLNEQKRAVEAALSSYMARLRGPETLKKAMAYSLEAGGKRIRPLLLLATIQA 60
Query: 118 VGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALL 177
+G D + +P ACA+EMIHT SLIHDDLP +DND+ RR KP +H+VFGE+ AILAGDALL
Sbjct: 61 LGKDPAIGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDALL 120
Query: 178 SLALEHVA-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIH 236
+ A + +A V+ V P ++ I ++ A G EG+VAG+ D+ +EGK ++L ELEYIH
Sbjct: 121 TYAFQLIAEVDDDRVPPSVRLQLIEQLAKAAGPEGMVAGQAADMEAEGKTLALAELEYIH 180
Query: 237 VHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTA 296
HKT K+L+ +V GA++GG + + + +A +GL FQ+ DDILD+ E++GK
Sbjct: 181 RHKTGKMLQYSVHAGALLGGADGRQTRELNEFAAHLGLAFQIRDDILDIEGMEEKIGKRV 240
Query: 297 GKDLASGKATYPKLMGIENAK 317
G D + KATYP L+ + AK
Sbjct: 241 GSDRDNKKATYPALLSLGGAK 261
>gi|56420928|ref|YP_148246.1| geranyltranstransferase [Geobacillus kaustophilus HTA426]
gi|47076820|dbj|BAD18360.1| geranyltranstransferase [Geobacillus kaustophilus]
gi|56380770|dbj|BAD76678.1| geranyltranstransferase (farnesyl-diphosphate synthase)
[Geobacillus kaustophilus HTA426]
Length = 297
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 119/261 (45%), Positives = 171/261 (65%), Gaps = 2/261 (0%)
Query: 59 LPTFPFEEYMIRKAEQVNKALDEAVV-LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCEL 117
+ E+++ + V AL + L+ P + KAM YSL AGGKR+RPLL +A+ +
Sbjct: 1 MAQLSVEQFLNEQKRAVEAALSSYMARLRGPETLKKAMAYSLEAGGKRIRPLLLLATIQA 60
Query: 118 VGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALL 177
+G D + +P ACA+EMIHT SLIHDDLP +DND+ RR KP +H+VFGE+ AILAGDALL
Sbjct: 61 LGKDPAIGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDALL 120
Query: 178 SLALEHVA-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIH 236
+ A + +A V+ V P ++ I ++ A G EG+VAG+ D+ +EGK ++L ELEYIH
Sbjct: 121 TYAFQLIAEVDDDRVPPSVRLQLIEQLAKAAGPEGMVAGQAADMEAEGKTLALAELEYIH 180
Query: 237 VHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTA 296
HKT K+L+ +V GA++GG + + + +A +GL FQ+ DDILD+ E++GK
Sbjct: 181 RHKTGKMLQYSVHAGALLGGADGRQTRELNEFAAHLGLAFQIRDDILDIEGMEEKIGKRV 240
Query: 297 GKDLASGKATYPKLMGIENAK 317
G D + KATYP L+ + AK
Sbjct: 241 GSDRDNKKATYPALLSLGGAK 261
>gi|366166849|ref|ZP_09466604.1| farnesyl-diphosphate synthase [Acetivibrio cellulolyticus CD2]
Length = 297
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 129/295 (43%), Positives = 186/295 (63%), Gaps = 6/295 (2%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVK--IHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F+E R A+ VN LD V ++ ++ AMRYSLLAGGKR+RP+L +A CEL+GGD
Sbjct: 3 FKENQQRYADLVNAFLDNYVKENDLLEKSVYSAMRYSLLAGGKRLRPVLALAVCELLGGD 62
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
+ MP ACA+EM+HT SLIHDDLP +DND+ RR K +H+ FGE+ AILAGD LL+LA
Sbjct: 63 INEVMPFACAIEMVHTYSLIHDDLPAMDNDDFRRGKLTNHKKFGEAIAILAGDGLLNLAF 122
Query: 182 EHVAVNIAGVSPDRV---VRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
E + + A + + V+A++ + + G+ G++AG+ +D SE K+V+ + LEY+H
Sbjct: 123 ELMIESTATDNCNNAVQKVKAMSYIAKSSGIHGMIAGQVIDTESENKEVAYETLEYMHKC 182
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT L++A VV A+I + ++ + YA +GL FQ+ DDILDV S+E+LGK G
Sbjct: 183 KTGALIKAPVVSSAIICNASEEDLRSLEAYAGNLGLAFQIKDDILDVEGSTEKLGKKVGS 242
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
D ++ K TY L G+E +K E +AI+ + F A L LA Y+ R+
Sbjct: 243 DESNKKTTYVSLYGLEKSKQMLRETTEEAIKNIGKF-GPNANFLRELAEYLIVRE 296
>gi|147677529|ref|YP_001211744.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum
thermopropionicum SI]
gi|146273626|dbj|BAF59375.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum
thermopropionicum SI]
Length = 294
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 129/293 (44%), Positives = 181/293 (61%), Gaps = 8/293 (2%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVK----IHKAMRYSLLAGGKRVRPLLCIASCELVG 119
F+E + +KA V +AL+ L PP IH AMRYS+L GGKR+RP L +A E VG
Sbjct: 4 FKEELKKKAALVEEALER--YLPPPDAYPPLIHHAMRYSVLGGGKRLRPALVMAGAEAVG 61
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
G+ + +PAACA+E+IHT SL+HDDLP +DND+ RR + +H+V+GE+ AILAGDALL+L
Sbjct: 62 GNAADVLPAACAVELIHTYSLVHDDLPAMDNDDYRRGRLTNHKVYGEAAAILAGDALLTL 121
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A E +A N P+ +VR I E +A G GL+ G+ VD S GK++ LEYIH HK
Sbjct: 122 AFELLANNDR-ARPENIVRVIREAAAAAGTMGLIGGQVVDTFSAGKEIDESTLEYIHRHK 180
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T L +V GA++ G ++ + YA +GL FQ+ DDILDV +++GK G D
Sbjct: 181 TGALYRFSVRAGAMLAGAQEEQLASLTAYAEHLGLAFQIKDDILDVEGDEKKIGKPVGSD 240
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
+ + K+TYP L G+E ++ A + + A L F +A L LA ++ R
Sbjct: 241 VRNRKSTYPSLFGMEYSRKKARQAVEMAKAALQPF-GGEADFLRMLAQFVIDR 292
>gi|374579594|ref|ZP_09652688.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus youngiae
DSM 17734]
gi|374415676|gb|EHQ88111.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus youngiae
DSM 17734]
Length = 288
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 128/290 (44%), Positives = 183/290 (63%), Gaps = 5/290 (1%)
Query: 68 MIRKAEQVNKALDEAVVLQPPVK---IHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW 124
M ++ Q + E + Q P + ++++M YSL+ GGKR+RP+L +AS E VGG+
Sbjct: 1 MFKETFQRYLTMIENTLTQLPWEKDILNESMYYSLIGGGKRIRPVLALASAEAVGGNPET 60
Query: 125 AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV 184
+ AA ALE+IHT SLIHDDLP +DND+ RR + ++H+VFGE+ AILAGDALL+ A E +
Sbjct: 61 ILRAAVALELIHTYSLIHDDLPAMDNDDYRRGRLSNHKVFGEAQAILAGDALLTYAFELL 120
Query: 185 AVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLL 244
A + G P+R +R I E+ A G EG+V G+ D+A EGK ++L E+E IH KT LL
Sbjct: 121 ADSDLG-QPERQLRVIREVAVAAGKEGMVGGQVADLAGEGKSLTLNEIEEIHKAKTGALL 179
Query: 245 EAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGK 304
+ G ++ GG +V+ + +YA+ +GL FQ+ DDILD+ SE LGK AG DL GK
Sbjct: 180 TVSARLGGILAGGTEDQVKALTDYAKALGLAFQIKDDILDIVGDSETLGKPAGSDLRQGK 239
Query: 305 ATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+TY L+G+E A + +A L F+ +A L LA YI R++
Sbjct: 240 STYVSLLGLEGAAQQLHAQILKAQSSLEVFD-ERAVFLNQLALYIEERKH 288
>gi|38455333|gb|AAR20832.1| geranylgeranyl diphosphate synthase [Taxus x media]
Length = 180
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 111/177 (62%), Positives = 135/177 (76%), Gaps = 2/177 (1%)
Query: 95 MRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERR 154
MRYSLLAGGKRVRP LCIA+CELVGG + AMP ACA+EMIHTMSLIHDDLP +DND+ R
Sbjct: 1 MRYSLLAGGKRVRPALCIAACELVGGSQDLAMPTACAMEMIHTMSLIHDDLPCMDNDDFR 60
Query: 155 RSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSP-DRVVRAIAEMCSAMGVEGLV 213
R KP +H+VFGE TA+LAGDALLS A EH+AV + P DR +R I+E+ + +GLV
Sbjct: 61 RGKPTNHKVFGEDTAVLAGDALLSFAFEHIAVATSKTVPSDRTLRVISELGKTISSQGLV 120
Query: 214 AGEFVDIASEGK-DVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYA 269
G+ VDI SEG +V LK LE+IH+HKTA LLE +VV G ++GG E+ R+R YA
Sbjct: 121 GGQVVDITSEGDANVDLKTLEWIHIHKTAVLLECSVVNGGILGGATEDEIARIRRYA 177
>gi|212638788|ref|YP_002315308.1| geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus
WK1]
gi|212560268|gb|ACJ33323.1| Geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus
WK1]
Length = 290
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 125/293 (42%), Positives = 184/293 (62%), Gaps = 8/293 (2%)
Query: 66 EYMIRK-AEQVNKALDEAV-VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
E ++R+ EQ+ + L + LQ P I +AM YSL AGGKR+RPLL +++
Sbjct: 2 ERLLRQYKEQIEQQLPAYIESLQAPQTIKEAMLYSLQAGGKRIRPLLLLSTLHAFRKPID 61
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
M ACALEMIHT SLIHDDLP +DND+ RR KP +H+VFGE+ AILAGDALL+ A +
Sbjct: 62 IGMSVACALEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEANAILAGDALLTYAFQV 121
Query: 184 VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
VA + +S D VR I+E+ A G EG+V G+ D+ EGK +SL++LEYIH HKT KL
Sbjct: 122 VADD-KTISSDVKVRLISELAKAAGPEGMVGGQVADLEGEGKTISLQQLEYIHRHKTGKL 180
Query: 244 LEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASG 303
L+ ++ GA++G ++ + +A +GL FQ+ DDILD+ +++GK G D+ +
Sbjct: 181 LQYSIRAGAILGEATEQQLTLLTLFADHLGLAFQIRDDILDIEGDEQKIGKKVGSDIEND 240
Query: 304 KATYPKLMGIENAKSFAGELLGQAIEELAYFEASK--AAPLYFLANYIASRQN 354
K+TYP L+ ++ AK +L E + +K A+ L+++ N + +R +
Sbjct: 241 KSTYPSLLTLDGAKK---KLYDHMKEARKLLDEAKIDASLLHYICNIVETRDH 290
>gi|261417748|ref|YP_003251430.1| polyprenyl synthetase [Geobacillus sp. Y412MC61]
gi|297529440|ref|YP_003670715.1| polyprenyl synthetase [Geobacillus sp. C56-T3]
gi|319767440|ref|YP_004132941.1| polyprenyl synthetase [Geobacillus sp. Y412MC52]
gi|448238671|ref|YP_007402729.1| (2E,6E)-farnesyl diphosphate synthase [Geobacillus sp. GHH01]
gi|261374205|gb|ACX76948.1| Polyprenyl synthetase [Geobacillus sp. Y412MC61]
gi|297252692|gb|ADI26138.1| Polyprenyl synthetase [Geobacillus sp. C56-T3]
gi|317112306|gb|ADU94798.1| Polyprenyl synthetase [Geobacillus sp. Y412MC52]
gi|445207513|gb|AGE22978.1| (2E,6E)-farnesyl diphosphate synthase [Geobacillus sp. GHH01]
Length = 297
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 118/261 (45%), Positives = 171/261 (65%), Gaps = 2/261 (0%)
Query: 59 LPTFPFEEYMIRKAEQVNKALDEAVV-LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCEL 117
+ E+++ + V AL + L+ P + KAM YSL AGGKR+RPLL +A+ +
Sbjct: 1 MAQLSVEQFLNEQKRAVEAALSSYMARLRGPETLKKAMAYSLEAGGKRIRPLLLLATIQA 60
Query: 118 VGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALL 177
+G D + +P ACA+EMIHT SLIHDDLP +DND+ RR KP +H+VFGE+ AILAGDALL
Sbjct: 61 LGKDPAIGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDALL 120
Query: 178 SLALEHVA-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIH 236
+ A + +A ++ V P ++ I ++ A G EG+VAG+ D+ +EGK ++L ELEYIH
Sbjct: 121 TYAFQLMAEIDDDRVPPPVRLQLIEQLAKAAGPEGMVAGQAADMEAEGKTLALAELEYIH 180
Query: 237 VHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTA 296
HKT K+L+ +V GA++GG + + + +A +GL FQ+ DDILD+ E++GK
Sbjct: 181 RHKTGKMLQYSVHAGALLGGADGRQTRELNEFAAHLGLAFQIRDDILDIEGMEEKIGKRV 240
Query: 297 GKDLASGKATYPKLMGIENAK 317
G D + KATYP L+ + AK
Sbjct: 241 GSDRDNKKATYPVLLSLGGAK 261
>gi|310658649|ref|YP_003936370.1| geranyltranstransferase [[Clostridium] sticklandii]
gi|308825427|emb|CBH21465.1| geranyltranstransferase [[Clostridium] sticklandii]
Length = 295
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 122/292 (41%), Positives = 180/292 (61%), Gaps = 2/292 (0%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F+E M + V K +DE + + K+ ++M+YS+ AGGKR+RP+L + + +L+ +
Sbjct: 3 FKELMEFDKQIVEKYMDELLSINVIYEKKLIESMKYSVQAGGKRLRPILFLETIKLLNKN 62
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
+ ACA+EMIHT SLIHDDLP +DND RR KP +H VFGE+TAILAGD LL+LA
Sbjct: 63 PFDFIEIACAIEMIHTYSLIHDDLPAMDNDSLRRGKPTNHVVFGEATAILAGDGLLNLAH 122
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
E + ++ + I + A G+ G++AG+ VDI SEGK + + +++IH +KT
Sbjct: 123 EIMIAFVSKKLTKNNINGINIISKAAGINGMIAGQAVDIESEGKSIDIDTMKFIHSNKTG 182
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
L+EA++V AV+ + + ++ YA+ IGL FQ+ DDILD+ + ELGK G D
Sbjct: 183 ALIEASIVAAAVMSDADDTRIAALKTYAKYIGLAFQITDDILDIEGNEAELGKKIGSDEL 242
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
+ KATYPK G+E +K +A + AIE L FE + LA+YI R+
Sbjct: 243 NDKATYPKYFGLEKSKEYAKNTITNAIESLNVFEPREKTFFVELADYIICRK 294
>gi|169831187|ref|YP_001717169.1| polyprenyl synthetase [Candidatus Desulforudis audaxviator MP104C]
gi|169638031|gb|ACA59537.1| Polyprenyl synthetase [Candidatus Desulforudis audaxviator MP104C]
Length = 295
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 120/259 (46%), Positives = 169/259 (65%), Gaps = 6/259 (2%)
Query: 64 FEEYMIRKAEQVNKALDEAVVL---QPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
F + + KAE ++ ALD + PPV IH+AMRYS+ AGGKR+RP L +A+ + VG
Sbjct: 2 FLQALAAKAETIDAALDRYLRQASENPPV-IHEAMRYSVFAGGKRLRPALTLAAAQAVGA 60
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
E +PAACA+E+IHT SLIHDDLP +DND+ RR KP +H VFGE+ A+LAG AL +LA
Sbjct: 61 PERLVLPAACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHRVFGEAVALLAGSALFALA 120
Query: 181 LEHVA--VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
E +A G++ +R++ + E+ +A G GL+ G+ +D+ S + VS ELE +H
Sbjct: 121 FEVLAGCRRDGGLAAERILAVVEEVAAACGTAGLIGGQALDVVSVSRTVSEAELEAVHRA 180
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT L AAV GAV+GG + +++ER+ +A GL FQ+ DDILDVT +E+ GK G
Sbjct: 181 KTGALFRAAVRAGAVLGGASPVQLERLTVFAEHFGLAFQITDDILDVTGYAEQTGKAVGS 240
Query: 299 DLASGKATYPKLMGIENAK 317
D + K TY + G+E A+
Sbjct: 241 DARNRKHTYVSVCGLEAAR 259
>gi|420156901|ref|ZP_14663741.1| polyprenyl synthetase [Clostridium sp. MSTE9]
gi|394756911|gb|EJF39970.1| polyprenyl synthetase [Clostridium sp. MSTE9]
Length = 295
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 128/296 (43%), Positives = 179/296 (60%), Gaps = 13/296 (4%)
Query: 69 IRKAEQVNKALDEAVVLQPP------VKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
+++ EQ + L+EA+ P ++ +M YSLL+GGKR+RP+L + C L GG
Sbjct: 3 MKRQEQYVEMLEEALSRYLPGGDQLQQELFSSMEYSLLSGGKRIRPILTLEFCRLCGGSL 62
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
+ A+P ACA+EMIHT SLIHDDLP +D+DE RR +P +H V+GE+TA+LAGDALL+LA E
Sbjct: 63 TAALPFACAIEMIHTYSLIHDDLPCMDDDELRRGRPTNHRVYGEATALLAGDALLTLAFE 122
Query: 183 HV----AVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
+ + AG + A + A G G+V G+ +D+ASEGK + L L +
Sbjct: 123 TMLSPQTIRTAGAV--KTATAAGVLARAAGATGMVGGQIIDLASEGKKIPLSTLRVMDER 180
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT L+ AA G V+GG ++ R YA+ +GL FQ+VDDILDVT S LGK G
Sbjct: 181 KTGALILAAAEMGCVVGGAGNEKIRAAREYAKALGLAFQIVDDILDVTGDSTLLGKNVGV 240
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
D + K+TY LMG++ AK EL +A+ LA F+ A L LA ++ R+N
Sbjct: 241 DDLNDKSTYVSLMGLDGAKKAVRELTDEAVTALAKFDGD-TAYLADLARELSVRKN 295
>gi|433444536|ref|ZP_20409408.1| polyprenyl synthetase [Anoxybacillus flavithermus TNO-09.006]
gi|432001564|gb|ELK22439.1| polyprenyl synthetase [Anoxybacillus flavithermus TNO-09.006]
Length = 290
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 126/292 (43%), Positives = 186/292 (63%), Gaps = 6/292 (2%)
Query: 66 EYMIRK-AEQVNKALDEAV-VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
E ++R+ EQ+ + L + LQ P I +AM YSL AGGKR+RPLL +++
Sbjct: 2 ERLLRQYKEQIEQQLPTYIESLQAPQTIKEAMLYSLRAGGKRIRPLLLLSTLHAFRKPIG 61
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
M ACALEMIHT SLIHDDLP +DND+ RR KP +H+VFGE+ AILAGDALL+ A +
Sbjct: 62 IGMSVACALEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEANAILAGDALLTYAFQV 121
Query: 184 VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
VA + +S D VR I+E+ A G EG+V G+ D+ EGK +SL++LEYIH HKT KL
Sbjct: 122 VADD-KTISSDVKVRLISELAKAAGPEGMVGGQVADLEGEGKTISLQQLEYIHRHKTGKL 180
Query: 244 LEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASG 303
L+ +V GA++G ++ + +A +GL FQ+ DDILD+ +++GK G D+ +
Sbjct: 181 LQYSVRAGAILGEATEQQLTLLTLFADHLGLAFQIRDDILDIEGDEQKIGKKVGSDIEND 240
Query: 304 KATYPKLMGIENAKSFAGELLGQAIEELAYFEAS-KAAPLYFLANYIASRQN 354
K+TYP L+ ++ AK + + +A + L EA A+ L+++ + + +R +
Sbjct: 241 KSTYPSLLTLDGAKKKLSDHMKEARKLLD--EAKIDASLLHYICDIVETRDH 290
>gi|51246551|ref|YP_066435.1| geranylgeranyl pyrophosphate synthase [Desulfotalea psychrophila
LSv54]
gi|50877588|emb|CAG37428.1| probable geranylgeranyl pyrophosphate synthase [Desulfotalea
psychrophila LSv54]
Length = 298
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/297 (42%), Positives = 182/297 (61%), Gaps = 7/297 (2%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQP-PVKIH-KAMRYSLLAGGKRVRPLLCIASCELVGGD 121
+ Y+ +K V +A+D ++ + P K H +AMRYSL AGGKR+RP+LC+A+ + +
Sbjct: 3 IKNYLEQKRSLVEEAMDRFMLEESGPFKKHIEAMRYSLFAGGKRIRPILCLAAADSICAQ 62
Query: 122 ESWA---MPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLS 178
E +P ACALE IHT SLIHDDLP +D+D+ RR K +H ++GE+ AILAGD LLS
Sbjct: 63 ERTQENLLPVACALECIHTYSLIHDDLPAMDDDQLRRGKATNHVLYGEAGAILAGDGLLS 122
Query: 179 LALEHVAVNIAG-VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHV 237
A + +A G ++ ++ + + A G G+V G+ +DI SE K++ L IH
Sbjct: 123 WAFDLIADRGKGNLTAEKRLDICHMVARAAGSLGMVGGQQLDIQSENKEIDFDTLATIHR 182
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
KT L+ +++ GA+ G NA ++ + Y IGL FQ++DD+LD T ++EELGKTAG
Sbjct: 183 SKTGALITCSIMSGAIGAGANAKQLHALEEYGNNIGLAFQIIDDLLDATATTEELGKTAG 242
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
D GKATYP GI+ + A + AI+ L F+ +A PL LANYI SR N
Sbjct: 243 SDAEHGKATYPLFFGIDKTREKAKAAVDNAIKALTLFD-HRADPLRGLANYIYSRTN 298
>gi|157273307|gb|ABV27206.1| geranylgeranyl diphosphate synthase [Candidatus Chloracidobacterium
thermophilum]
Length = 292
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 121/260 (46%), Positives = 165/260 (63%), Gaps = 11/260 (4%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPV-----KIHKAMRYSLLAGGKRVRPLLCIASCELV 118
E Y K +VN+ LD L PP +IH+AMRYSL+AGGKR+RP+L +A+ E
Sbjct: 2 IEAYFAEKVPEVNRWLDR---LMPPATTFPPRIHEAMRYSLMAGGKRLRPILVLAAGEAF 58
Query: 119 GGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLS 178
GG P ACA EM+HT SLIHDDLP +DND+ RR P H+ F E+TAILAGD L++
Sbjct: 59 GGAPERLYPVACAFEMVHTYSLIHDDLPAMDNDDLRRGMPTCHKQFDEATAILAGDGLMT 118
Query: 179 LALEHVAVNIAGVSPDRVVRAIAEMCSAMG-VEGLVAGEFVDIASEGKDVSLKELEYIHV 237
A +A A ++ VR I E+ G VEG++AG+ VD+ +E K + + L++IH
Sbjct: 119 HAFRILAEMDA--PAEQKVRVIRELAVGSGTVEGMIAGQIVDLEAERKPIDAERLKFIHR 176
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
KT L+ AVVCG ++ G ++ + Y +GL FQ+ DDILD T ++E+LGKT G
Sbjct: 177 AKTGALIRGAVVCGGIVAGATESDLALLAAYGDRVGLAFQIADDILDETATAEQLGKTPG 236
Query: 298 KDLASGKATYPKLMGIENAK 317
KD A+GKATYP L G+E ++
Sbjct: 237 KDAAAGKATYPALYGLEASR 256
>gi|251773174|gb|EES53727.1| Geranyltranstransferase [Leptospirillum ferrodiazotrophum]
Length = 297
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 129/293 (44%), Positives = 190/293 (64%), Gaps = 6/293 (2%)
Query: 67 YMIRKAEQVNKALD---EAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
Y+ + ++V+KAL+ E + + ++ + +RYSLLAGGKR+RP+L +A+ E VGGD
Sbjct: 6 YLDMQKKRVDKALEALFERELSREYGRLAEGIRYSLLAGGKRIRPVLALAAIEAVGGDGE 65
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
+P LE++HT SL+HDDLP +DND+ RR +P +H V+GE+ AILAGDALL+ A
Sbjct: 66 SLLPLTLPLELVHTYSLVHDDLPAMDNDDLRRGRPTNHVVYGEAAAILAGDALLTHAFTL 125
Query: 184 VA--VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
++ V + R + + E+ SA G+ G+V G+F+DI SEGK+++L ELE +H HKT
Sbjct: 126 LSDPVYDKVLPASRRMEVVHELSSASGLCGMVGGQFLDIVSEGKNLTLPELENLHRHKTG 185
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
LL A+V G ++ G ++ VE + Y +G+ FQ+ DD+LDV ++EELGK A KD
Sbjct: 186 ALLRASVRIGGILAGASSEWVEALTRYGEAVGIAFQIADDLLDVLGTAEELGKAAQKDAG 245
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TYP L+GI+ A+ A E +A E +A F SK PL +A+YI R+N
Sbjct: 246 KSKNTYPGLVGIDRARILAEEKCREAHEAVAVF-GSKGEPLARIASYIIERRN 297
>gi|116620237|ref|YP_822393.1| farnesyl-diphosphate synthase [Candidatus Solibacter usitatus
Ellin6076]
gi|116223399|gb|ABJ82108.1| farnesyl-diphosphate synthase [Candidatus Solibacter usitatus
Ellin6076]
Length = 298
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 135/302 (44%), Positives = 185/302 (61%), Gaps = 8/302 (2%)
Query: 57 IPLPTFPFEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIAS 114
+ L +Y+ ++ V+ LD V + P IH+AMRYSL AGGKR+RP+LCI +
Sbjct: 1 MDLHRMDLRDYLAQQQRLVDSELDRLVPPESAAPETIHRAMRYSLFAGGKRIRPILCIEA 60
Query: 115 CELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGD 174
V D + AAC+LE+IHT SLIHDDLP LDND+ RR K +H+VFG++ AILAGD
Sbjct: 61 ARTVSDDCAGVAAAACSLELIHTYSLIHDDLPALDNDDYRRGKLTNHKVFGDAMAILAGD 120
Query: 175 ALLSLALEHVAVNIAGVSPD-RVVRAIAEMCSAMG-VEGLVAGEFVDIASEGKDVSLKEL 232
+LL+LA + +A A PD R R IAE+ +A G V G++ G+ D+ EGK + L
Sbjct: 121 SLLTLAFQVLAQLDA---PDARKTRLIAELATASGTVGGMIGGQVADLEGEGKPPDAQLL 177
Query: 233 EYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEEL 292
E IH KT LL A++ GA+ G + E + Y + +GL FQ+VDDILDV +SSE L
Sbjct: 178 ETIHRAKTGALLRASLRLGAIFAGAAEPQYEALSCYGQHVGLAFQIVDDILDVEESSEAL 237
Query: 293 GKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
GKTAGKD A K T+P + G+E ++ A +A LA F +A L+ LA+ I R
Sbjct: 238 GKTAGKDAAQHKITFPAVYGLEPSREMAARECERAHAVLAPF-GERALRLHELADLIVRR 296
Query: 353 QN 354
++
Sbjct: 297 KS 298
>gi|242052439|ref|XP_002455365.1| hypothetical protein SORBIDRAFT_03g009380 [Sorghum bicolor]
gi|241927340|gb|EES00485.1| hypothetical protein SORBIDRAFT_03g009380 [Sorghum bicolor]
Length = 364
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 173/298 (58%), Positives = 222/298 (74%), Gaps = 4/298 (1%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVV-LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
TF E Y+ A V+ ALD A+ L P + ++MRYS+LAGGKR+RP L IA+CELVG
Sbjct: 67 TFDIERYLSANARTVHDALDLALQGLGCPEVLRESMRYSVLAGGKRLRPALAIAACELVG 126
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
G + A+P ACA+EM+HT SLIHDD+P +D+D RR +P++H FGE TA+L+GDALL+L
Sbjct: 127 GPAAAAVPVACAVEMMHTASLIHDDMPCMDDDPLRRGRPSNHVAFGEPTALLSGDALLAL 186
Query: 180 ALEHVAVNIAG--VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDV-SLKELEYIH 236
A EHVA AG V DR +RA+ E+ SA GV G+ AG+ D+AS+G SL LEYIH
Sbjct: 187 AFEHVARASAGAGVPADRALRAVLELGSAAGVGGIAAGQVADMASQGASSGSLAALEYIH 246
Query: 237 VHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTA 296
VHKTA+L+EAA V GAV+GGG EVERVR YA +GLL QVVDD+LDVT +SE+LGKTA
Sbjct: 247 VHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLLQVVDDVLDVTATSEQLGKTA 306
Query: 297 GKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
GKD A+GKATYP+LMG+E A+++ GELL +A EL F+A++A PL LA ++A RQ+
Sbjct: 307 GKDAAAGKATYPRLMGMEGARAYMGELLAKAEAELDGFDAARAVPLLHLARFMAYRQH 364
>gi|333979347|ref|YP_004517292.1| polyprenyl synthetase [Desulfotomaculum kuznetsovii DSM 6115]
gi|333822828|gb|AEG15491.1| Polyprenyl synthetase [Desulfotomaculum kuznetsovii DSM 6115]
Length = 296
Score = 228 bits (580), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 125/252 (49%), Positives = 165/252 (65%), Gaps = 6/252 (2%)
Query: 71 KAEQVNKALDEAVVLQ---PPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMP 127
+A V++ALDE + + PPV IH+A+RYSL AGGKR+RP+L +A+ E VGGD + +P
Sbjct: 10 RAALVDRALDEFLPPEDTYPPV-IHQAIRYSLFAGGKRLRPVLALAAAETVGGDPARVLP 68
Query: 128 AACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVN 187
AACALE+IHT SLIHDDLP +DND+ RR KP H V+GE+ AILAGDALL+ A +A N
Sbjct: 69 AACALELIHTYSLIHDDLPAMDNDDFRRGKPTCHRVYGEAVAILAGDALLTHAFALLAKN 128
Query: 188 IAG-VSP-DRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLE 245
++P +RVV+ I E+ +A G GL+ G+ VD + V LEYIH HKT L
Sbjct: 129 AQNQLAPAERVVQVIEEVAAAAGTLGLIGGQVVDTLAADTAVDAATLEYIHRHKTGALYR 188
Query: 246 AAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKA 305
AV GA++ G ++E + YA +GL FQ+ DDILDV LGK G D + KA
Sbjct: 189 VAVRAGAILAGAKEKQLEALTIYAENLGLAFQIQDDILDVEGDPARLGKPVGSDERNKKA 248
Query: 306 TYPKLMGIENAK 317
TYP L G++ A+
Sbjct: 249 TYPALFGLDVAR 260
>gi|451982552|ref|ZP_21930861.1| Geranylgeranyl pyrophosphate synthase homolog [Nitrospina gracilis
3/211]
gi|451760198|emb|CCQ92154.1| Geranylgeranyl pyrophosphate synthase homolog [Nitrospina gracilis
3/211]
Length = 296
Score = 228 bits (580), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 126/298 (42%), Positives = 181/298 (60%), Gaps = 13/298 (4%)
Query: 63 PFEEYMIRKAEQVNKALDEAVVL---QP---PVKIHKAMRYSLLAGGKRVRPLLCIASCE 116
P E+Y+ E + DEA+ L +P PV IH++M YSL AGGKR+RP L IA+ E
Sbjct: 2 PAEDYLAECKEYI----DEAIPLFLPEPDTYPVSIHESMHYSLSAGGKRLRPTLLIAATE 57
Query: 117 LVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDAL 176
VGG +P A A E +HT +LIHDDLP LDND RR KP +H+VFGE+ AILAGDAL
Sbjct: 58 AVGGSRKDVLPFAVAAEFLHTYTLIHDDLPALDNDSLRRGKPTNHKVFGEAIAILAGDAL 117
Query: 177 LSLA--LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEY 234
L+ A L A + + + ++RA EM A+ G++ G+ VD+ SEGK + LEY
Sbjct: 118 LTQAFVLMTNAFLMEAIPHENILRASHEMAQALSSTGVIGGQVVDLESEGKPIEASTLEY 177
Query: 235 IHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGK 294
IH++KT ++ V GA++G ++ ++ + + IGL FQ++DDILD+ ++GK
Sbjct: 178 IHIYKTGFFFKSCVRVGAILGRADSQQLGAISRFGAHIGLAFQIIDDILDIVGDKAKIGK 237
Query: 295 TAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
G D++ KATYP L G+E ++ A L+ +AI L F+ +A PL +A + R
Sbjct: 238 DVGSDVSKNKATYPALFGLEESRKKADSLVEEAITCLKDFD-ERANPLRDIALFFVQR 294
>gi|288940506|ref|YP_003442746.1| polyprenyl synthetase [Allochromatium vinosum DSM 180]
gi|288895878|gb|ADC61714.1| Polyprenyl synthetase [Allochromatium vinosum DSM 180]
Length = 297
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 130/296 (43%), Positives = 195/296 (65%), Gaps = 9/296 (3%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQP----PVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
+++ R A +V ALD+ +L P P ++H+AMRY++LAGGKR+RPLL A+ E +G
Sbjct: 6 LDDFRARCAARVETALDQ--ILPPVSVQPSRLHEAMRYTVLAGGKRIRPLLAYAAGEALG 63
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
D + ACA+EMIH SLIHDDLP +D+D+ RR +P H F E+TAILAGDAL +L
Sbjct: 64 LDAALLDHPACAVEMIHAYSLIHDDLPAMDDDDLRRGRPTCHRAFDEATAILAGDALQTL 123
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A + +A G+S + V ++ + A G G+V G+ +D+ +EG + L +LE IH+HK
Sbjct: 124 AFQALA-EAPGLSAESRVAMVSALARASGARGMVGGQAMDLEAEGTPLDLVQLENIHIHK 182
Query: 240 TAKLLEAAVVCGAVIGGG-NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
T L+ +V G + GG +A + ER+ +YA+C+GL FQ+ DD+LDV + ++GKTAG+
Sbjct: 183 TGALIRVSVQMGVLAHGGLDADKAERLDHYAKCLGLAFQIQDDVLDVEGDTAQIGKTAGR 242
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
D KATYP L+G+ AK+ A +L+ +AIE ++ F +A PL ++AN + R+N
Sbjct: 243 DQELNKATYPALVGLAEAKAMANQLINEAIESVSIF-GERAQPLVWIANALLGRKN 297
>gi|390959330|ref|YP_006423087.1| geranylgeranyl pyrophosphate synthase [Terriglobus roseus DSM
18391]
gi|390414248|gb|AFL89752.1| geranylgeranyl pyrophosphate synthase [Terriglobus roseus DSM
18391]
Length = 303
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 129/275 (46%), Positives = 178/275 (64%), Gaps = 10/275 (3%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD-ESWAMPAACALEMIHTMSLIHDDLP 146
P IH+AMR+S+ AGGKR+RPLL I S ++ GD A A+EM+HT SLIHDDLP
Sbjct: 31 PHNIHRAMRHSVFAGGKRLRPLLVIESARMIAGDLPDGAADVGAAIEMLHTYSLIHDDLP 90
Query: 147 FLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRV--VRAIA-EM 203
LDND+ RR KP H V+GE+ AILAGDAL +LA E +A ++G + ++ V+ +A
Sbjct: 91 ALDNDDLRRGKPTCHVVYGEAMAILAGDALQTLAYETLA-KLSGDAAAKIEIVKEVAIAT 149
Query: 204 CSAMGVEGL----VAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNA 259
+ +G EGL + G+ +DI EG+ + + +E IH KT L+ ++V G +IGG +A
Sbjct: 150 GTGVGSEGLAPGMIGGQVMDIEGEGQKPTAELVEAIHRSKTGALITVSIVAGGLIGGASA 209
Query: 260 IEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSF 319
EV +R + + GL FQ+VDDILDVT+SS ELGKTAGKD AS KAT+P + G++ ++
Sbjct: 210 DEVMHLRRFGQRAGLAFQIVDDILDVTQSSAELGKTAGKDTASDKATWPAVFGLDASRET 269
Query: 320 AGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A ELL + ELA F A +A L +A + R N
Sbjct: 270 AAELLRDGLAELAGFGA-RADALKAVAKALVERTN 303
>gi|224103129|ref|XP_002312936.1| predicted protein [Populus trichocarpa]
gi|222849344|gb|EEE86891.1| predicted protein [Populus trichocarpa]
Length = 314
Score = 227 bits (579), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 129/314 (41%), Positives = 185/314 (58%), Gaps = 21/314 (6%)
Query: 48 QNSVFESTDIPLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLA-GGKRV 106
Q S+ ST P F + Y ++N+ LD+AV +Q P KI++AMRYS+LA G KR
Sbjct: 5 QCSLSVSTHSKTPQFDLKTYWTTLILEINQKLDQAVPIQYPDKIYEAMRYSVLAKGAKRA 64
Query: 107 RPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGE 166
P++C+A+CEL GG+ A P ACALEM+H+ SLIHDDLP +D+D RR +P++H+++G
Sbjct: 65 PPVMCVAACELFGGNRHAAFPTACALEMVHSASLIHDDLPCMDDDPSRRGQPSNHKIYGV 124
Query: 167 STAILAGDALLSLALEHVAVNIAG--VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG 224
AILAGDAL L H+ + V R++ IAE+ A+G G+ AG+F+D+ EG
Sbjct: 125 DMAILAGDALFPLGFRHIVSHTPSDLVPEPRLLSVIAEIARAVGSTGMAAGQFLDL--EG 182
Query: 225 KDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILD 284
S +E++ K ++ E + VCG ++ G E++R+R Y R +G+L+QVVDDIL+
Sbjct: 183 GPNS---VEFVQEKKFGEMGECSAVCGGLLAGAKDDEIQRLRRYGRAVGVLYQVVDDILE 239
Query: 285 V----TKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFE--ASK 338
+K E+ K GK +Y L G+E A A EL +A EEL FE
Sbjct: 240 AKTMKSKVDEDKKKRKGK-------SYVALYGVEKAIEVAEELRAKAKEELDGFEKYGES 292
Query: 339 AAPLYFLANYIASR 352
PLY +Y A R
Sbjct: 293 VLPLYSFVDYAADR 306
>gi|310829047|ref|YP_003961404.1| polyprenyl synthetase [Eubacterium limosum KIST612]
gi|308740781|gb|ADO38441.1| Polyprenyl synthetase [Eubacterium limosum KIST612]
Length = 297
Score = 227 bits (578), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 125/299 (41%), Positives = 181/299 (60%), Gaps = 11/299 (3%)
Query: 63 PFEEYMIRKAEQVNKALDEAV--VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
PF+E ++ K ++ + L P I AM+YSL AGGKR+RP+L +C +GG
Sbjct: 3 PFKETLLEKVKETDHELLACFDRKFDTPDIIVSAMKYSLFAGGKRLRPILMKETCRCLGG 62
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
D + P ACA+EMIHT SLIHDDLP +DND+ RR KP +H+V+GE+ AILAGDALL+ A
Sbjct: 63 DSADVKPLACAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGENMAILAGDALLNYA 122
Query: 181 LEHVAVNIAGVSPD-----RVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYI 235
+E IAG+ D RA++ + + GV G++ G+ DI SE + ++ +++ YI
Sbjct: 123 ME---TAIAGIPVDPSKTFHYTRALSYLAHSSGVNGMIGGQTGDILSENEAINEEKMYYI 179
Query: 236 HVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKT 295
H HKT LL+AAV+CG + E + + Y+ IGL FQ+VDDILDVT + LGK
Sbjct: 180 HAHKTGALLKAAVLCGGFVAKVTGEERDALETYSEKIGLAFQIVDDILDVTGDEKTLGKP 239
Query: 296 AGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
G D + K+T+ L G+ +++ EL A++ LA + + L +A YI R+N
Sbjct: 240 VGSDEKNHKSTFVSLYGMASSQEKIRELENGALDALATIDHDTSF-LEDMAKYICQREN 297
>gi|258515780|ref|YP_003192002.1| polyprenyl synthetase [Desulfotomaculum acetoxidans DSM 771]
gi|257779485|gb|ACV63379.1| Polyprenyl synthetase [Desulfotomaculum acetoxidans DSM 771]
Length = 296
Score = 227 bits (578), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 134/287 (46%), Positives = 182/287 (63%), Gaps = 5/287 (1%)
Query: 72 AEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAA 129
A QV+ AL+ ++ + P IH+AMRYS+ AGGKR+RP + IA+ E VGG MPAA
Sbjct: 11 AGQVDAALNRYLLPESSCPEIIHRAMRYSIFAGGKRLRPAMLIAAAEAVGGSADKVMPAA 70
Query: 130 CALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVA--VN 187
CALE+IHT SLIHDDLP +D+D+ RR KP +H+VFGE+ AILAGDALL+++ + +A
Sbjct: 71 CALELIHTYSLIHDDLPSMDDDDYRRGKPTNHKVFGEAMAILAGDALLTMSFQLLAGLSG 130
Query: 188 IAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAA 247
G++P VVR IA++ +A G GL+ G+ VDI S +++ LEYIH KT L AA
Sbjct: 131 RNGIAPADVVRVIADISAAAGTTGLIGGQVVDIVSANQEIDAGTLEYIHTKKTGALFRAA 190
Query: 248 VVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATY 307
+ GAV+ G + E++ + NYA GL FQ+ DDILDV ++ GK G D + KATY
Sbjct: 191 IRSGAVLSGADDEELKSLTNYAEHFGLAFQITDDILDVAGDMQKTGKPVGSDEKNNKATY 250
Query: 308 PKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
P L G+E A AG QA+ L F KA L L ++ +R +
Sbjct: 251 PALYGLEEAYRLAGYSAEQALYALEPF-GEKANFLKELVKFVVNRDH 296
>gi|398803633|ref|ZP_10562651.1| geranylgeranyl pyrophosphate synthase [Polaromonas sp. CF318]
gi|398095886|gb|EJL86217.1| geranylgeranyl pyrophosphate synthase [Polaromonas sp. CF318]
Length = 306
Score = 227 bits (578), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 124/300 (41%), Positives = 176/300 (58%), Gaps = 4/300 (1%)
Query: 59 LPTFPFEEYMIRKAEQVNKALDEAVVLQP----PVKIHKAMRYSLLAGGKRVRPLLCIAS 114
LP F ++ ++ V AL V P + AMRY++L GGKR+RPLL +A+
Sbjct: 7 LPLFTLSDWSAKQLATVESALSRWVACPTDSPAPAGLGDAMRYAVLDGGKRLRPLLVMAA 66
Query: 115 CELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGD 174
CE VGG+ A+ AACA+E+IH SL+HDD+P +DND RR KP H FG++ A+LAGD
Sbjct: 67 CEAVGGNREAALRAACAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVKFGQAQALLAGD 126
Query: 175 ALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEY 234
AL +LA E + V R + A G +G+ G+ +D+AS G + ++L
Sbjct: 127 ALQALAFEFLTPEDGSVDAATQARLCRMLAQAAGFQGMAGGQAIDLASVGMPLDSQQLHE 186
Query: 235 IHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGK 294
+H KT LLEA+V+ GA G + +R+Y +GL FQVVDDILDVT S LGK
Sbjct: 187 MHRLKTGALLEASVMMGAACGTVAPAAWQALRDYGSAVGLAFQVVDDILDVTADSATLGK 246
Query: 295 TAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
TAGKD A K T+ LMG+E +K++A +LL +A+ L ++ L LA+ + +R +
Sbjct: 247 TAGKDAAQDKPTFVSLMGLEASKAYAQQLLARALAGLDATGLARTEALRALADMLVNRHH 306
>gi|149179199|ref|ZP_01857766.1| Polyprenyl synthetase [Planctomyces maris DSM 8797]
gi|148841972|gb|EDL56368.1| Polyprenyl synthetase [Planctomyces maris DSM 8797]
Length = 298
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 130/294 (44%), Positives = 179/294 (60%), Gaps = 30/294 (10%)
Query: 63 PFEEYMIRKAEQVNKALDEAVVLQ---PPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
PF+E VN+ L+EA+ PP+ + AM YSL AGGKR+RP+L + SCE G
Sbjct: 7 PFKEMWSNLQTLVNRQLEEALDQSGDCPPI-LKAAMSYSLSAGGKRLRPILVLLSCEACG 65
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
GD+S A+PAACA+EM+HT SLIHDDLP +D+DE RR P SH FGE+ AILAGDALL+
Sbjct: 66 GDQSTALPAACAIEMVHTYSLIHDDLPAMDDDELRRGLPTSHIKFGEANAILAGDALLTR 125
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMC-----SAMGVEGLVAGEFVDIASEG-KDVSLKELE 233
A E +A I V++ A C +A G G+V G+ D+ SE ++ +L+ LE
Sbjct: 126 AFELLANQIE-------VKSCAAACCVDLANAAGAVGMVGGQVADLESEHLENPTLEILE 178
Query: 234 YIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELG 293
IH KT +L+ +A+ GA IGG + ++ + Y CIGL FQ+ DD+LD+T E++G
Sbjct: 179 AIHKRKTGRLICSALTMGARIGGADPATLKNLERYGTCIGLAFQITDDLLDLTGDEEKMG 238
Query: 294 KTAGKDLASGKATYPKLMGIENAKSFAGELL-------------GQAIEELAYF 334
K KD GK TYP L+G+E ++ + L+ GQ +EELA+F
Sbjct: 239 KGVRKDADHGKLTYPSLIGVEESRRRSQNLIEEACLSIAPLGSHGQRLEELAHF 292
>gi|189218412|ref|YP_001939053.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum infernorum
V4]
gi|189185270|gb|ACD82455.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum infernorum
V4]
Length = 300
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 119/293 (40%), Positives = 180/293 (61%), Gaps = 3/293 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAVV--LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
E Y+ + + V AL + V + P +H+A+ Y L +GGKR+RP+LC+A V +
Sbjct: 9 IENYIFEQQQVVESALRKFVTGKAKKPRILHEAIDYCLFSGGKRLRPILCLAGAHAVCRN 68
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
A+P ACA+E IHT SL+HDDLP +DND+ RR KP+ H+++GE+ AIL GDALL+LA
Sbjct: 69 SDCALPMACAVECIHTYSLVHDDLPSMDNDDFRRGKPSLHKIYGEALAILTGDALLALAF 128
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
E ++ V + I E+ G LVAG+ D+ +EGK++ L +L YIH KTA
Sbjct: 129 EVASLCSPLGRTYPVSQMIWELARTAGSRALVAGQVADLEAEGKEIGLTQLRYIHCRKTA 188
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
L+ ++ GA+ + ++ + Y R +GL FQ++DDILDVT+++E LGK+AGKD
Sbjct: 189 ALITTSLRLGAMAADADKKTLDLITRYGRALGLAFQIIDDILDVTQTTEILGKSAGKDQK 248
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ KATYP++MG+E +K A +A+ + K L LAN++ +R+
Sbjct: 249 AKKATYPRIMGLEYSKEAAAYYTQKALRYASKL-GEKGRLLSDLANFLLTREK 300
>gi|384915972|ref|ZP_10016175.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum
fumariolicum SolV]
gi|384526670|emb|CCG92046.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum
fumariolicum SolV]
Length = 299
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 123/296 (41%), Positives = 182/296 (61%), Gaps = 9/296 (3%)
Query: 64 FEEYMIRKAEQVNKALDEAVV--LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
E Y+ ++ + AL + V + P +H+A+ YSL +GGKR+RP+LC+A V
Sbjct: 8 IEAYIAKQQGIIESALRKYVTDKSKKPRILHEAIDYSLFSGGKRLRPILCLAGAHTVCMA 67
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
A+P ACA+E IHT SLIHDDLP +DND+ RR KP+ H+++GE+ AIL GDALL+LA
Sbjct: 68 TDCALPMACAVECIHTYSLIHDDLPSMDNDDFRRGKPSLHKIYGEAMAILTGDALLALAF 127
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
E ++ S + I E+ A G LVAG+ D+ SEGK++ L +L YIH KTA
Sbjct: 128 EIASLCSPLGSSYPLSTMIWELARAAGSRALVAGQVADLESEGKEIGLTQLRYIHCRKTA 187
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
L+ A+ GA+ + + + Y R +GL FQ++DDILDVT+++E LGK+AGKD
Sbjct: 188 ALITVALRLGAMSANADEKTLRLITKYGRSLGLAFQIIDDILDVTQTTEILGKSAGKDQK 247
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEAS---KAAPLYFLANYIASRQN 354
+ KATYP++MG+E +K A +++ Y+ ++ L LANY+ +R+
Sbjct: 248 AKKATYPRIMGLEYSKKAAAYYTQKSL----YYASALGENGKLLSELANYLLARKR 299
>gi|317051795|ref|YP_004112911.1| polyprenyl synthetase [Desulfurispirillum indicum S5]
gi|316946879|gb|ADU66355.1| Polyprenyl synthetase [Desulfurispirillum indicum S5]
Length = 296
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 124/286 (43%), Positives = 176/286 (61%), Gaps = 10/286 (3%)
Query: 75 VNKALDEAVVLQPP-----VKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAA 129
+N+ L+E +L P IH+AM YS+ AGGKR+RPLLC+ + + DES + A
Sbjct: 15 INQRLEE--LLSPSDEPLLTTIHEAMLYSVRAGGKRLRPLLCLLTAGALRQDESRVLDIA 72
Query: 130 CALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIA 189
CA+EMIHT SLIHDDLP LDND+ RR KP +H V+GE+ AILAGDALL+ A E V +
Sbjct: 73 CAIEMIHTYSLIHDDLPALDNDDLRRGKPTNHRVYGEAMAILAGDALLNRAFE-VLCQLP 131
Query: 190 GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVV 249
++PD V+R IAE+ S+ G G++ G+ VDI SEGK + + + YIH +KT +++ + +V
Sbjct: 132 -LAPDLVIRVIAEIASSSGTAGMIGGQVVDIQSEGKSIDMPTMRYIHENKTGRIIRSCLV 190
Query: 250 CGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPK 309
A+ A ++E Y IGL FQ+ DDILD+ +GK G DL + K+T+P
Sbjct: 191 SSAIACQATAEQIELFDRYGYNIGLAFQIADDILDIEGDEATMGKPVGSDLQNRKSTWPA 250
Query: 310 LMGIENAKSFAGELLGQAIEELAYFEASKA-APLYFLANYIASRQN 354
L+G+ A+ E++ +A L S A L LA +I R+N
Sbjct: 251 LVGMNGARKAMQEMIDEANRALDPLGDSPAVTALRDLARFIIERKN 296
>gi|449454249|ref|XP_004144868.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like [Cucumis sativus]
gi|449508802|ref|XP_004163415.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like [Cucumis sativus]
Length = 335
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 125/296 (42%), Positives = 183/296 (61%), Gaps = 13/296 (4%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLA-GGKRVRPLLCIASCELVGG 120
F + Y + ++N+ LDEAV LQ P +I++AMRYS+LA G KR P++C+A+CEL G
Sbjct: 40 FDLKTYWKQLILEINQKLDEAVPLQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGV 99
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
D A P ACALEM+H SLIHDDLP +D+D RR +P++H V+G AILAGDAL L
Sbjct: 100 DRLAAFPTACALEMVHEASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLG 159
Query: 181 LEHVAVNIAG--VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
+H+ + V R++R +AE+ A+G G+ AG+F+D+ EG S +E++
Sbjct: 160 FQHIVSHTPFDLVPESRLLRVVAEIARAVGSRGMAAGQFLDL--EGGPNS---VEFVQEK 214
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
K ++ + + VCG ++ G E++R+R Y R +G+L+QVVDDIL+ + S++L T
Sbjct: 215 KFGEMAQCSAVCGGLLAGAEDHEIQRLRRYGRAVGVLYQVVDDILE--EQSKKLDYTDES 272
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFE--ASKAAPLYFLANYIASR 352
+ GK +Y ++ GIE AK A EL +A EL FE + PLY +Y A R
Sbjct: 273 KRSKGK-SYVEVYGIEKAKEVAEELRAKAKNELEGFEKYGDQVMPLYSFVDYAADR 327
>gi|345861767|ref|ZP_08814019.1| geranyltranstransferase [Desulfosporosinus sp. OT]
gi|344325160|gb|EGW36686.1| geranyltranstransferase [Desulfosporosinus sp. OT]
Length = 277
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 125/266 (46%), Positives = 171/266 (64%), Gaps = 6/266 (2%)
Query: 91 IHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDN 150
+ ++M YSL+ GGKR+RP+L +AS E VGG +PAA ALE+IHT SLIHDDLP +DN
Sbjct: 16 LDQSMYYSLIGGGKRIRPVLALASAEAVGGSSELILPAAVALELIHTYSLIHDDLPAMDN 75
Query: 151 DERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVE 210
D+ RR + ++H+VFGE+ AILAGDALL+ A E +A G S +R +R I E+ A G
Sbjct: 76 DDYRRGRLSNHKVFGEAQAILAGDALLTYAFEFLADEGLGQS-ERQLRIIREVAVAAGKV 134
Query: 211 GLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYAR 270
G+V G+ D+A EGK ++L E+E IH KT LL + G ++ GG +V+ + +YA+
Sbjct: 135 GMVGGQVADVAGEGKTLTLNEIEEIHKAKTGALLTVSARLGGILAGGTEEQVKALTDYAQ 194
Query: 271 CIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEE 330
+GL FQ+ DDILDV S LGK AG DL GKATY L+G+E A+ +L Q ++
Sbjct: 195 ALGLAFQIKDDILDVVGDSATLGKPAGSDLRQGKATYVSLLGLEGAEH---QLHAQILKA 251
Query: 331 LAYFE--ASKAAPLYFLANYIASRQN 354
+ + A A L LA YI RQ+
Sbjct: 252 QSAVKPFAEGAFFLSELAYYIEQRQH 277
>gi|410478476|ref|YP_006766113.1| geranylgeranyl pyrophosphate synthase [Leptospirillum ferriphilum
ML-04]
gi|424866252|ref|ZP_18290093.1| Geranyltranstransferase [Leptospirillum sp. Group II 'C75']
gi|124515823|gb|EAY57332.1| Geranyltranstransferase [Leptospirillum rubarum]
gi|387223049|gb|EIJ77421.1| Geranyltranstransferase [Leptospirillum sp. Group II 'C75']
gi|406773728|gb|AFS53153.1| geranylgeranyl pyrophosphate synthase [Leptospirillum ferriphilum
ML-04]
Length = 303
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 125/300 (41%), Positives = 183/300 (61%), Gaps = 14/300 (4%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVK---IHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
E Y+ R V + LD V + + ++MRYSLLAGGKR+RP+L +A+ E +G
Sbjct: 9 IEAYLNRCKNAVEQFLDSLFVKEQRTDYGTLAESMRYSLLAGGKRIRPVLAMAAIEALGK 68
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
D +P LE+IHT SLIHDDLP +DND RR KP +H ++G++TAILAGDALL+
Sbjct: 69 DPIPYIPLLAPLELIHTYSLIHDDLPSMDNDSLRRGKPTNHVIYGDATAILAGDALLT-- 126
Query: 181 LEHVAVNIAGVSPDRVV------RAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEY 234
H ++ D++V + I E+ GV G+V G+ +DIASEGK ++L LE+
Sbjct: 127 --HAFTLLSDPDYDKLVSFEIRLKIIQELSVGAGVNGMVGGQQMDIASEGKALNLSSLEF 184
Query: 235 IHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGK 294
+H HKT L+ A++ GA++G ++ + E + Y + +G+ FQ+ DD+LDV + LGK
Sbjct: 185 LHQHKTGALIRASLRIGALLGKASSPDFEHLDRYGQAVGIAFQIADDLLDVEGDAALLGK 244
Query: 295 TAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A KD K TYP LMG+E A++ A L +A++ ++ F KA L LA+YI R+N
Sbjct: 245 AAQKDQDRHKNTYPGLMGVEKARNMARHKLNEALDAISSF-GEKAKHLRELASYIIERRN 303
>gi|307243218|ref|ZP_07525389.1| geranyltranstransferase [Peptostreptococcus stomatis DSM 17678]
gi|306493346|gb|EFM65328.1| geranyltranstransferase [Peptostreptococcus stomatis DSM 17678]
Length = 294
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 121/262 (46%), Positives = 171/262 (65%), Gaps = 5/262 (1%)
Query: 94 AMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDER 153
AM YS AGGKR+RP+L + S +L GG S +P A A+EMIHT SLIHDDLP LDND+
Sbjct: 35 AMNYSYKAGGKRLRPILIMESYKLCGGKGSEYLPYAAAIEMIHTYSLIHDDLPALDNDDL 94
Query: 154 RRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDR--VVRAIAEMCSAMGVEG 211
RR K +H+VFGE+ AILAGD LL+ A E V +N A S D+ ++A + G+ G
Sbjct: 95 RRGKKTNHKVFGEAMAILAGDGLLNYAYE-VILNHALNSSDQPSAIKACKAIADGAGIYG 153
Query: 212 LVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARC 271
+V G+ VD+ SE K++ L L++IH++KTA ++ A + GA + G + VE++ Y R
Sbjct: 154 MVGGQVVDVESESKEIDLACLDFIHLNKTAAMIVACMKSGAYLAGADDDTVEKLEAYGRY 213
Query: 272 IGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEEL 331
+GL FQ+ DDILD+ +ELGK G D+ + KATYP ++G+E +K A +L+ +A E++
Sbjct: 214 LGLAFQIADDILDIEGDEKELGKNVGSDIENDKATYPHILGMERSKEIARDLVVKAKEKI 273
Query: 332 AYFEASKAAPLYFLANYIASRQ 353
FE A L LA+Y+ SR
Sbjct: 274 EAFEG--AEFLVGLADYVISRN 293
>gi|89895097|ref|YP_518584.1| hypothetical protein DSY2351 [Desulfitobacterium hafniense Y51]
gi|423073546|ref|ZP_17062285.1| putative geranyltranstransferase [Desulfitobacterium hafniense DP7]
gi|89334545|dbj|BAE84140.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|361855624|gb|EHL07587.1| putative geranyltranstransferase [Desulfitobacterium hafniense DP7]
Length = 289
Score = 224 bits (570), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 128/267 (47%), Positives = 173/267 (64%), Gaps = 1/267 (0%)
Query: 87 PPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLP 146
P + ++M YSL AGGKR+RP+L +A+ VGGD +PA CALE+IHT SLIHDDLP
Sbjct: 23 PTGTLAESMNYSLSAGGKRIRPVLALAAAHAVGGDCEDILPAVCALELIHTYSLIHDDLP 82
Query: 147 FLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSA 206
+DND+ RR + A+H+VFGE AILAGDALL+ A E +A ++GV P R +RAI E+ A
Sbjct: 83 AMDNDDYRRGRLANHKVFGEGQAILAGDALLTYAFELIAQPMSGVEPQRQLRAIREVAQA 142
Query: 207 MGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVR 266
G EG+V G+ +D+ +E K ++L ELE +H KT +L A GA++ GG ++E +
Sbjct: 143 AGPEGMVGGQMLDLEAEEKQLNLAELEQVHRLKTGAILVVAARLGAILAGGTEEKIEALT 202
Query: 267 NYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQ 326
+YA+ IGL FQ+ DDILD+ SE LGK DL K+TYP LMG+ AK +
Sbjct: 203 SYAQAIGLAFQIKDDILDLESDSETLGKPVHSDLRQHKSTYPSLMGLAGAKLELKIKTDE 262
Query: 327 AIEELAYFEASKAAPLYFLANYIASRQ 353
A LA +A L+ LA+YIA R+
Sbjct: 263 AHAALAVL-GERAGFLHELADYIAQRK 288
>gi|1229166|gb|AAB67731.1| geranylgeranyl pyrophosphate synthase, partial [Arabidopsis
thaliana]
Length = 222
Score = 224 bits (570), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 131/222 (59%), Positives = 172/222 (77%), Gaps = 4/222 (1%)
Query: 137 TMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAG-VSPDR 195
T SLIHDDLP +DN + RR KP +H+V+GE A+LAGDALL+LA EH+ V +G V+P+R
Sbjct: 1 TSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVVSSGLVAPER 60
Query: 196 VVRAIAEMCSAMGVEGLVAGEFVDIASEGKD---VSLKELEYIHVHKTAKLLEAAVVCGA 252
++RA+ E+ A+G GLVAG+ +D+ASE + V L+ LE+IH+HKTA LLEAA V G
Sbjct: 61 MIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAAVLGV 120
Query: 253 VIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMG 312
++GGG E+E++R YARCIGLLFQVVDDILDVTKS+EELGKTAGKD+ +GK TYP+L+G
Sbjct: 121 IMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIG 180
Query: 313 IENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+E +K A +L +A E+L F+ SKAAPL LA++IA R N
Sbjct: 181 LERSKEVAEKLRREAEEQLLGFDPSKAAPLVALASHIAFRHN 222
>gi|91787628|ref|YP_548580.1| farnesyl-diphosphate synthase [Polaromonas sp. JS666]
gi|91696853|gb|ABE43682.1| farnesyl-diphosphate synthase [Polaromonas sp. JS666]
Length = 306
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 121/300 (40%), Positives = 173/300 (57%), Gaps = 4/300 (1%)
Query: 59 LPTFPFEEYMIRKAEQVNKALDEAVVLQP----PVKIHKAMRYSLLAGGKRVRPLLCIAS 114
LP F + ++ E + +AL V P + AMRY++L GGKR+RPLL +A+
Sbjct: 7 LPLFTLSAWSAQQLETIEQALSRWVACPTDAPAPAGLGDAMRYAVLDGGKRLRPLLVMAA 66
Query: 115 CELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGD 174
CE V G+ A+ +ACA+E+IH SL+HDD+P +DND RR KP H FGE+ A+LAGD
Sbjct: 67 CEAVNGNAEAALRSACAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVKFGEAQALLAGD 126
Query: 175 ALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEY 234
AL +LA E + + V R + A G +G+ G+ +D+AS G ++ +L
Sbjct: 127 ALQALAFEFLTPDDGSVDAATQARLCRMLAQAAGFQGMAGGQAIDLASVGLPLTSGQLHE 186
Query: 235 IHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGK 294
+H KT LL+A+V+ G G +R Y +GL FQVVDDILDVT S LGK
Sbjct: 187 MHRLKTGALLQASVMMGTACGAAPPAAQHALREYGAAVGLAFQVVDDILDVTADSATLGK 246
Query: 295 TAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
TAGKD A K T+ LMG++ +K +A +LLG+A+ L L+ LA+ + +R +
Sbjct: 247 TAGKDAAQDKPTFVSLMGLQASKDYAQQLLGKALASLDASGLGNTHALHALADMLVNRHH 306
>gi|225174881|ref|ZP_03728878.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1]
gi|225169521|gb|EEG78318.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1]
Length = 293
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 135/289 (46%), Positives = 189/289 (65%), Gaps = 10/289 (3%)
Query: 74 QVNKALDEAV-VLQP-----PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMP 127
Q K +DEA+ L P P +IH+A+RYS+ AGGKR+RPLL +A+ E+ G A+P
Sbjct: 7 QAIKDVDEALERLIPAEDTFPQEIHRAVRYSVFAGGKRLRPLLTLAAAEIFGVPRLHALP 66
Query: 128 AACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVN 187
AACA+EM+HT SLIHDDLP LD+D+ RR + ++H+VFG++ AILAGD+LL+LA E +A
Sbjct: 67 AACAIEMVHTYSLIHDDLPALDDDDYRRGRLSNHKVFGDAMAILAGDSLLTLAFETLAAE 126
Query: 188 -IAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEA 246
A +P VVR + A G+ G++ G+ VD+ SEGK V+ L+YIH HKT L
Sbjct: 127 ATAYFAPATVVRLTEALGKAAGMSGMIGGQVVDLLSEGKQVNAATLDYIHRHKTGALFTC 186
Query: 247 AVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKAT 306
+ GA++GG + E++R+ +A+ IGL FQ+VDDILD+T LGK G D KAT
Sbjct: 187 CIKSGAIMGGASLEEMQRLTVFAQNIGLAFQIVDDILDITGDEAALGKKTGADQNRQKAT 246
Query: 307 YPKLMGIENAKSFAGELLGQAIEELAYF-EASKAAPLYFLANYIASRQN 354
YP L G++ A+ A +LL A +E+ YF +A K+ L FLA + R+
Sbjct: 247 YPALYGLKQAEEKARDLLSAAEKEMEYFGDAGKS--LLFLAKKLVEREK 293
>gi|410667961|ref|YP_006920332.1| polyprenyl synthetase [Thermacetogenium phaeum DSM 12270]
gi|409105708|gb|AFV11833.1| polyprenyl synthetase [Thermacetogenium phaeum DSM 12270]
Length = 295
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 133/295 (45%), Positives = 185/295 (62%), Gaps = 6/295 (2%)
Query: 64 FEEYMIRKAEQVNKALDEAV---VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
+++ + +A+ +N +L + PPV IH+AMRYS AGGKR+R +L +A+ ++G
Sbjct: 3 WQQELTTRADLINSSLQSLLPPASCYPPV-IHEAMRYSSFAGGKRLRGVLTLATAGMLGL 61
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
+E +PAA A+EMIHT SLIHDDLP +D+D+ RR +P H VFGE+ AILAGDALL+LA
Sbjct: 62 EEERVLPAAAAIEMIHTYSLIHDDLPAMDDDDYRRGRPTCHRVFGEAIAILAGDALLTLA 121
Query: 181 LEHVA-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
E ++ + G + V++ I E+ S G GLV G+ VD+ SEGKD+ LEYIH HK
Sbjct: 122 FETLSRLAEGGFASSVVLQVIQEVASGAGSRGLVGGQVVDLESEGKDIEASVLEYIHRHK 181
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T L AA+ GA++ G E+ + YA GL FQ+ DDILD+ S E+LGK G+D
Sbjct: 182 TGALFRAAIRSGAILAGAGDKELTALTGYAEAFGLAFQITDDILDLAGSEEKLGKKTGRD 241
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
LA GK TYP L G++ A+ A + + + LA F +A L A Y+ SRQ
Sbjct: 242 LARGKVTYPGLFGMKKAREMAACQVEKCLMSLAVF-GPEAEFLREAALYLLSRQT 295
>gi|345877461|ref|ZP_08829207.1| geranylgeranyl pyrophosphate synthetase [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344225510|gb|EGV51867.1| geranylgeranyl pyrophosphate synthetase [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 300
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 120/294 (40%), Positives = 183/294 (62%), Gaps = 7/294 (2%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
E+M+ +V ALD+++ + P ++H+AMRY++L GGKR+RP+L A+ + +G +
Sbjct: 7 LREFMLFCQNRVEHALDKSLPAESTSPARLHQAMRYAVLGGGKRIRPILTYATGQALGVE 66
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
+ AACA+EMIH SL+HDDLP +D+DE RR +P H+ + E+TAIL GDAL + A
Sbjct: 67 INQLDTAACAVEMIHAYSLVHDDLPAMDDDELRRGRPTCHKAYDEATAILVGDALQTQAF 126
Query: 182 EHVAV--NIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
+ + N+ + R + I + A G G+ G+ +D+ + G+++SL ELE +H+HK
Sbjct: 127 QIICTSGNLHASAETR-LEMIETLSRASGSRGMCGGQALDLNAVGQELSLAELENLHIHK 185
Query: 240 TAKLLEAAVVCGAVIGGG-NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
T L+ A+V +++ + ++ +YA+C+GL FQ+ DDILDV +E LGKT GK
Sbjct: 186 TGALIRASVNTASLLAPRLEPEQAHQLDHYAKCVGLAFQIRDDILDVEGDTETLGKTQGK 245
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
D A K TYP L+G+ A+ A EL A L F+ SKA PL +LA+YI R
Sbjct: 246 DQAQDKPTYPALLGLNGAREKAAELQADAHRSLTGFD-SKADPLRWLADYIIGR 298
>gi|114331488|ref|YP_747710.1| polyprenyl synthetase [Nitrosomonas eutropha C91]
gi|114308502|gb|ABI59745.1| farnesyl-diphosphate synthase [Nitrosomonas eutropha C91]
Length = 297
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 119/267 (44%), Positives = 170/267 (63%), Gaps = 2/267 (0%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPF 147
P ++H+AMRY++L GGKRVRPLL A+ EL G D++ + A+ A+E+IH SL+HDDLP
Sbjct: 31 PARLHEAMRYAVLNGGKRVRPLLSFAAGELSGADKTQVIAASAAVELIHAYSLVHDDLPC 90
Query: 148 LDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAM 207
+DND RR KP H +GE TA+L GD+L SLA + +A + P + I + A
Sbjct: 91 MDNDILRRGKPTCHIRYGEPTALLVGDSLQSLAFQLLAESALTEDPRTQLEMIRHLAFAA 150
Query: 208 GVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGG-NAIEVERVR 266
G G+ G+ +D+ S GK +SL ELE++H+HKT L+ AAV+ GA G N + +++
Sbjct: 151 GSRGMAGGQAIDLDSVGKTLSLPELEFMHIHKTGALIRAAVILGARCGSRLNEDQFKQLD 210
Query: 267 NYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQ 326
++A+CIGL FQVVDDILD S+ LGKTAGKD + K TY ++GI+ A+ A EL +
Sbjct: 211 HFAKCIGLAFQVVDDILDAEASTAALGKTAGKDAENNKPTYVSILGIKQARELAHELQRE 270
Query: 327 AIEELAYFEASKAAPLYFLANYIASRQ 353
A L F +A L + ++I R+
Sbjct: 271 ASGVLDKF-GPEALRLQQITDFIVQRE 296
>gi|308274743|emb|CBX31342.1| Geranylgeranyl pyrophosphate synthetase, chloroplastic [uncultured
Desulfobacterium sp.]
Length = 316
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 182/298 (61%), Gaps = 10/298 (3%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPV-KIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
F E Y K + + L + ++ KAM YSL++ GKR+RP+LCIA+ E VGG
Sbjct: 22 FDLESYFAEKTKTIKNELINIINKSNSFGQLSKAMEYSLISEGKRIRPILCIAAAESVGG 81
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
+S +PAACA+E+IHT SLIHDDLP +DND RR KP H F E+TAILAGDALL+LA
Sbjct: 82 KQSDVLPAACAIEIIHTYSLIHDDLPAIDNDLLRRGKPTCHAAFNEATAILAGDALLTLA 141
Query: 181 LE-----HVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYI 235
+ + N + +++ I+ +A G G++ G+ DIASE + L +LE +
Sbjct: 142 FQVLSEFELHNNTNALKWLKIINLIS---TAAGYMGMIEGQMRDIASENTQILLNKLEEL 198
Query: 236 HVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKT 295
H+ KT L+ A+V GA++ + ++++++ YA+ IGL FQ+ DD+L+ GK
Sbjct: 199 HILKTGALIVASVESGAILANASLDQIKQLKIYAKKIGLAFQIADDLLNAMGDPTITGKP 258
Query: 296 AGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
G D K+TYP L+GI+ ++++A +L+ +A+ LA F+ +K+ PL +A YI R
Sbjct: 259 VGTDNVRKKSTYPSLLGIDESENYAKKLIKEALHALAIFD-NKSDPLRAIALYIIERN 315
>gi|402571586|ref|YP_006620929.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus meridiei
DSM 13257]
gi|402252783|gb|AFQ43058.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus meridiei
DSM 13257]
Length = 288
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/292 (43%), Positives = 182/292 (62%), Gaps = 9/292 (3%)
Query: 68 MIRKAEQVNKALDEAVVLQPPVK---IHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW 124
M ++ Q + E + Q P + + ++M YSL+ GGKR+RP+L +AS E VGG
Sbjct: 1 MFKETFQRYLTMIEETLAQLPWRKNSLDESMYYSLIGGGKRIRPVLALASAEAVGGKPES 60
Query: 125 AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV 184
+ AA ALE+IHT SLIHDDLP +DND+ RR + A+H+++GE+ AILAGDALL+ A E +
Sbjct: 61 ILRAAAALELIHTYSLIHDDLPAMDNDDYRRGRLANHKIYGEAGAILAGDALLTYAFELL 120
Query: 185 AVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLL 244
A G P+R +R I E+ A G +G+V G+ DI +EGK ++L E+E IH KT +L
Sbjct: 121 ASLELG-QPERELRIIREVAVASGKDGMVRGQVADITAEGKVLTLPEIEEIHKGKTGAIL 179
Query: 245 EAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGK 304
+ G V+GGG+ +++ + +YA+ +GL FQ+ DDILDV SE LGK AG DL GK
Sbjct: 180 TVSARLGGVLGGGSEDDIQALTDYAQALGLAFQIKDDILDVIGDSETLGKPAGSDLRQGK 239
Query: 305 ATYPKLMGIENAKSFAGELLGQAIEELAYFE--ASKAAPLYFLANYIASRQN 354
+TY L+G+E A EL Q ++ A + K L LA YI R++
Sbjct: 240 STYVSLLGLEGASE---ELHSQILKAQAAIKPFGQKGNFLNELALYIEERKH 288
>gi|325290005|ref|YP_004266186.1| farnesyl-diphosphate synthase [Syntrophobotulus glycolicus DSM
8271]
gi|324965406|gb|ADY56185.1| farnesyl-diphosphate synthase [Syntrophobotulus glycolicus DSM
8271]
Length = 289
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 116/264 (43%), Positives = 172/264 (65%), Gaps = 2/264 (0%)
Query: 91 IHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDN 150
+ ++M Y+L+AGGKRVRP+L +A+ E+VGG +P AC LEMIHT SLIHDDLP LDN
Sbjct: 28 LSESMAYTLMAGGKRVRPVLALAAAEIVGGAPEVVIPCACGLEMIHTYSLIHDDLPALDN 87
Query: 151 DERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVE 210
D+ RR +P +H+VFGE+TA+LAGD LL+ + +A ++ V +R ++ I E A+G +
Sbjct: 88 DDYRRGRPTNHKVFGEATALLAGDGLLTYGFQLLASDVP-VPLERQIKVIRETAEAVGWQ 146
Query: 211 GLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYAR 270
G+V G+ +D E ++S+ ++ IH KT LL A+V GA++GGG E+ ++ YA
Sbjct: 147 GMVRGQVLDTLGEKGELSVSQITNIHHLKTGALLTASVRLGAILGGGLEEEIRQLSIYAA 206
Query: 271 CIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEE 330
+GL FQ+ DDILD+ + + LGK G DL K+TYP ++G++ AK + + +A
Sbjct: 207 ALGLAFQIKDDILDIEGTEDALGKPVGSDLKLQKSTYPSILGMDGAKIQLKQKIIEAKTA 266
Query: 331 LAYFEASKAAPLYFLANYIASRQN 354
L FE KA L A+YI +R +
Sbjct: 267 LEKFE-EKAEFLLCFADYIETRNH 289
>gi|146297123|ref|YP_001180894.1| polyprenyl synthetase [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|145410699|gb|ABP67703.1| Polyprenyl synthetase [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 298
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/293 (40%), Positives = 182/293 (62%), Gaps = 8/293 (2%)
Query: 66 EYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES-- 123
EY+ E+++K LD + P I++AMRYS+ AGGKR+RP+LC+ S EL+ G E+
Sbjct: 8 EYLKYAQEKIDKHLDSLLGKNSPDVIYEAMRYSVFAGGKRLRPILCLLSYELLSGKEADE 67
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
+ ACA+E+IHT SLIHDDLP +DND RR KP +H VFGE+ AILAGDALL+ A E
Sbjct: 68 KVLDIACAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILAGDALLNKAAE- 126
Query: 184 VAVN--IAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEY-IHVHKT 240
V N + + + ++A + A G EG++ G+ +D+ + GK+++ + L Y +H+ KT
Sbjct: 127 VCFNWILRNKAKENFIKAAEYLFKASGTEGMIGGQVIDVVNSGKEITEENLLYEMHLKKT 186
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
+KL++A+ VCGA + G + Y + +GL FQ+ DDILD S+++GK+ GKD+
Sbjct: 187 SKLIQASCVCGAYVAGAKEEVISDFEEYGKNLGLAFQIRDDILDFIGDSKKVGKSIGKDI 246
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
K T+ GIE A+++ +AIE + ++ + L NY+ +R+
Sbjct: 247 KEKKNTFVTFYGIEKAQNYVESFSKKAIEIVEKYD--RMGLFIELTNYLITRE 297
>gi|388496908|gb|AFK36520.1| unknown [Medicago truncatula]
Length = 342
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/353 (37%), Positives = 189/353 (53%), Gaps = 31/353 (8%)
Query: 5 ATIPSYGNSTLFRNPINDFKKSPYRAPIFRFKLFSKKIKARHAQNSVFESTDIPLPTFPF 64
AT+PS I F+KSP R R + + + ++ V F
Sbjct: 7 ATMPSLN--------IGRFQKSPNRILPIRCSMAAPSPSSVSIRSKVVH--------FDL 50
Query: 65 EEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLA-GGKRVRPLLCIASCELVGGDES 123
+ Y Q+N+ LDEA+ +Q P +I++AMRYS LA G KR P++CI++CEL GG
Sbjct: 51 KTYWTSLMTQINQKLDEAIEVQFPQQIYEAMRYSALAKGAKRSPPVMCISACELFGGSRL 110
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
A P ACALEM+H SLIHDDLP +D+ RR +P++H ++G AILAGDAL L +H
Sbjct: 111 AAFPTACALEMVHAASLIHDDLPCMDDSLSRRGQPSNHTIYGVDMAILAGDALFPLGFQH 170
Query: 184 VAVNIAG--VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
+ + V RV+R IAE+ +G G+ AG+F+D+ V L I K
Sbjct: 171 IVSHTPSDLVPEPRVLRVIAEIARCVGSTGMAAGQFLDLKGGPNAVGL-----IQDKKFG 225
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
++ E + VCG ++ G E+ER+R Y R +G+L+ +VDDIL+ E L KD
Sbjct: 226 EMAECSAVCGGLLAGAEDDEIERLRRYGRAVGVLYAIVDDILE-----ERLKPEGDKDRE 280
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFE--ASKAAPLYFLANYIASR 352
+ +Y ++ G+E A A EL +A+EEL FE + PLY NY R
Sbjct: 281 NSGKSYVEVYGVEKAAEVAEELRAKALEELDGFEKYGDQVLPLYSFVNYAIDR 333
>gi|410453715|ref|ZP_11307660.1| polyprenyl synthetase [Bacillus bataviensis LMG 21833]
gi|409932929|gb|EKN69883.1| polyprenyl synthetase [Bacillus bataviensis LMG 21833]
Length = 297
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 106/235 (45%), Positives = 158/235 (67%), Gaps = 1/235 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
L P I ++M YSL AGGKR+RPLL A+ + G D +P A A+EMIHT SLIHDD
Sbjct: 28 LDAPSVIKESMIYSLEAGGKRIRPLLLFATLDAFGIDPKKGLPVAAAIEMIHTYSLIHDD 87
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSP-DRVVRAIAEM 203
LP +DND+ RR KP +H+VFG++ AILAGDALL+ + E + + +P + ++ + EM
Sbjct: 88 LPSMDNDDLRRGKPTNHKVFGDAIAILAGDALLTYSFEVIGLLSNEFAPANTKLKLVVEM 147
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+V G+ D+ EGK+++L EL+YIH+HKT KLL +VV GA++ + +++
Sbjct: 148 AKAAGTEGMVGGQVADMEGEGKNLTLPELDYIHIHKTGKLLRFSVVAGAILADSSQSQLD 207
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKS 318
+ +A +GL FQ+ DDILD+ + + +GK G D + K+TYP+L+ +E A++
Sbjct: 208 HLSGFAHHLGLAFQIQDDILDLIGNPQVIGKPVGSDTTNHKSTYPQLLSLEGARA 262
>gi|374312746|ref|YP_005059176.1| geranyltranstransferase [Granulicella mallensis MP5ACTX8]
gi|358754756|gb|AEU38146.1| Geranyltranstransferase [Granulicella mallensis MP5ACTX8]
Length = 324
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 176/297 (59%), Gaps = 33/297 (11%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW----AMPA---------ACALEM 134
P IH+AMR+S AGGKR+RP+LC+ + ++V + + A PA A ALEM
Sbjct: 31 PYSIHRAMRHSTFAGGKRLRPILCMEAAKMVASTDFYPPEEAAPAGHPEGVANLAAALEM 90
Query: 135 IHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPD 194
+HT SLIHDDLP LDND+ RR +P H VFGE+TAILAGDAL +LA + +A A P+
Sbjct: 91 LHTYSLIHDDLPALDNDDLRRGQPTCHVVFGEATAILAGDALQTLAFQTIASLPA--PPE 148
Query: 195 RVVRAIAEMCSAMGV-------------EGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
VV + ++ ++G G++ G+ VDI SEG + +E IH KT
Sbjct: 149 AVVAILRKISLSIGTGIGRWGDHDTGIAPGMIGGQVVDIESEGTKPTPDLVEAIHRAKTG 208
Query: 242 KLLEAAVVCGAVIG----GGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
L+ ++V GA+ G G + ER+R + GL FQ+VDD+LD+T+SSEELGKTAG
Sbjct: 209 ALITVSIVAGAIYGSSRHGLPSSYHERIRTFGEKAGLAFQIVDDVLDMTQSSEELGKTAG 268
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
KD A+ KAT+P + GIE +K A EL+ A L F A PL LA Y+ R +
Sbjct: 269 KDTATDKATWPAVFGIEQSKHDAAELIADAFAALEPF-GDAATPLKSLAQYLVERTH 324
>gi|408356541|ref|YP_006845072.1| polyprenyl diphosphate synthase [Amphibacillus xylanus NBRC 15112]
gi|407727312|dbj|BAM47310.1| polyprenyl diphosphate synthase [Amphibacillus xylanus NBRC 15112]
Length = 294
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 181/295 (61%), Gaps = 3/295 (1%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAV-VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
F F Y+ E +N +L E++ L P + +M YS+ AGGKR+RP+L IAS E G
Sbjct: 2 NFNFRNYLEANLEFINHSLIESIEKLSIPSTLKASMLYSIKAGGKRIRPILMIASVEAFG 61
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
G + +PAA ALE++HT SLIHDDLP +D+D RR +P +H FGE+TAILAGD+LL+L
Sbjct: 62 GKKEDVLPAAIALELVHTYSLIHDDLPAMDDDNLRRGQPTNHIEFGEATAILAGDSLLTL 121
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A + V ++ ++ V I + A G G+VAG+ +D+ +E + V+L ELE IH K
Sbjct: 122 AFQ-VISEAENLTAEQKVTIIKRLSMASGPTGMVAGQILDLEAEERQVNLSELEQIHRLK 180
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T +LL AV GA + G +++ +R + IGL+FQ+ DDILD+ ++LGK G D
Sbjct: 181 TGELLIFAVEIGAYLAGAAQEQLKAIREFGHHIGLIFQIQDDILDIEGDEQKLGKAVGSD 240
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K+TYPKL+GIE A + QA L + + + L+ +YI++R++
Sbjct: 241 QENKKSTYPKLLGIEGALQAKAANIKQAEASLNQAQIANST-LHAFIDYISNRES 294
>gi|187735758|ref|YP_001877870.1| polyprenyl synthetase [Akkermansia muciniphila ATCC BAA-835]
gi|187425810|gb|ACD05089.1| Polyprenyl synthetase [Akkermansia muciniphila ATCC BAA-835]
Length = 297
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 123/292 (42%), Positives = 179/292 (61%), Gaps = 3/292 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQ--PPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
+Y+ + ++ ALD + + P IHKAMRYS+ AGGKR+RP+LC+A+ E GG
Sbjct: 6 LNDYITEQCALIDAALDRLLPAEDESPETIHKAMRYSIFAGGKRMRPVLCLAAAEACGGL 65
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
A+ ACA+EM+HT SLIHDDLP +DND+ RR KP SH+ FGE AILAGDALL+ A
Sbjct: 66 AVDALVPACAVEMMHTYSLIHDDLPAMDNDDLRRGKPTSHKAFGEGVAILAGDALLTEAF 125
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
+A + V + E+ + G L+ G+ +D+ E K +S E+ ++ KTA
Sbjct: 126 AVIA-QVDDTERYTVRDYVRELAATGGSTMLIGGQILDLEGEHKQLSEPEVRTVYEGKTA 184
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
LL A+ G + ++E + ++ +GL FQV+DDILD+T S+E+LGKTAGKD+
Sbjct: 185 ALLTTALRFGGMSANATESQLEALTDFGYNLGLAFQVIDDILDLTASTEKLGKTAGKDVN 244
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
S K+T P L+G++ A+S A A++ L F + A L LANY+ +R+
Sbjct: 245 SQKSTCPALIGLDGARSEAKCRTQAALDALMIFPEERRARLVELANYLLNRE 296
>gi|297569005|ref|YP_003690349.1| Geranyltranstransferase [Desulfurivibrio alkaliphilus AHT2]
gi|296924920|gb|ADH85730.1| Geranyltranstransferase [Desulfurivibrio alkaliphilus AHT2]
Length = 296
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 133/295 (45%), Positives = 189/295 (64%), Gaps = 5/295 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAVV-LQPPVKIH-KAMRYSLLAGGKRVRPLLCIASCELVGGD 121
++Y+ + ++V +ALD+ + ++ P+ H +AMRYSLLAGGKR+RP+LC+A+ E + D
Sbjct: 3 IKQYLNHRCQEVEQALDQLLPPIEGPLAGHVEAMRYSLLAGGKRIRPILCLAAAEALPTD 62
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
+P A ALE IHT SLIHDDLP +D+D+ RR P H+ FGE+ AILAGD LLS A
Sbjct: 63 SRPLLPVAAALECIHTYSLIHDDLPAMDDDDLRRGNPTCHKKFGEAAAILAGDGLLSFAF 122
Query: 182 EHVAVNIA--GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
E +A +A +S + I + +A+G G+V G+ +DI +EG+ + L++L+ IH K
Sbjct: 123 ELLARPLATKNISAGEQLHLIGNIAAAIGPMGMVGGQVLDIEAEGRQIELEQLQQIHRCK 182
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T L+ AV GA+ GG + + E + +Y IGL FQ+VDD+L+VT S LGK AG D
Sbjct: 183 TGALITVAVQSGAIGGGADRRQYEALTSYGEQIGLAFQIVDDLLNVTGDSTTLGKAAGSD 242
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A GKATYP L+G+E + A E + AI L F +A PL LA YIA+R+
Sbjct: 243 AARGKATYPALLGLEATRRQADEAVAGAITALNGF-GEEAEPLRELARYIAARRK 296
>gi|292670718|ref|ZP_06604144.1| geranyltranstransferase [Selenomonas noxia ATCC 43541]
gi|292647664|gb|EFF65636.1| geranyltranstransferase [Selenomonas noxia ATCC 43541]
Length = 291
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 116/264 (43%), Positives = 171/264 (64%), Gaps = 2/264 (0%)
Query: 91 IHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDN 150
+ +AM YSL+AGGKR+RP+L +A+ + VG D + +PAACALEMIHT SLIHDDLP +DN
Sbjct: 30 LREAMEYSLMAGGKRLRPILLMAAADAVGSDGTKLLPAACALEMIHTYSLIHDDLPAMDN 89
Query: 151 DERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVE 210
D+ RR K +H+V+G+ AILAGDALL+LA V + V ++R + E+ A G E
Sbjct: 90 DDYRRGKLTNHKVYGDGIAILAGDALLTLAFT-VLLRQKDVPAVSLLRVVDEISRAAGAE 148
Query: 211 GLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYAR 270
G+V G+ +D+ +E K +SL EL +H+ KT L AA+ GA++GG + ++ + YA
Sbjct: 149 GMVGGQVLDLQAENKTISLDELRRVHMGKTGALFHAALRSGAILGGASEQQLTALTAYAD 208
Query: 271 CIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEE 330
GL FQ+ DDILDV ++E++GK G D + K+TY L + A+ A + +A+
Sbjct: 209 HFGLAFQITDDILDVVGNAEDIGKPVGSDEKNHKSTYVTLTSLSAAQELARRTVDEALAA 268
Query: 331 LAYFEASKAAPLYFLANYIASRQN 354
LA F S+A+ L L +Y+ +R+
Sbjct: 269 LAVF-GSEASFLRELVSYLVNRKQ 291
>gi|302872147|ref|YP_003840783.1| polyprenyl synthetase [Caldicellulosiruptor obsidiansis OB47]
gi|302575006|gb|ADL42797.1| Polyprenyl synthetase [Caldicellulosiruptor obsidiansis OB47]
Length = 299
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 120/296 (40%), Positives = 185/296 (62%), Gaps = 7/296 (2%)
Query: 63 PFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD- 121
EEY+ + V + LD+ + + P I++AMRYS+ AGGKR+RPLLC+ S ++V D
Sbjct: 5 KLEEYINLSQKNVEEHLDKILKEKSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMVSKDK 64
Query: 122 --ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
+ + A A+E+IHT SLIHDDLP +DND RR KP SH VFGE+ AILAGDALL+L
Sbjct: 65 EIDRKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTSHVVFGEAIAILAGDALLNL 124
Query: 180 ALEHVAVNIAGVSPDR-VVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEY-IHV 237
A E I ++ +V+A + A GVEG++ G+ +DI + G+D+ +EL + +H+
Sbjct: 125 AAEVCLNWILNYGCEKNLVKAAKYLFWASGVEGMIGGQVIDITNSGQDIKSEELLFEMHL 184
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
KT++L++A+ VCGA++ G V + Y + +GL FQ+ DD+LDV S+++GK+ G
Sbjct: 185 KKTSRLIQASCVCGALVAGAEDSVVSDLEEYGKNLGLAFQIRDDVLDVIGDSKKVGKSIG 244
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
KD+ K T+ G+E A+ +AI+ + ++ S+ L L NY+ +R+
Sbjct: 245 KDIKEKKNTFVTFYGLEEAQQLVKNYSQKAIDVIKKYDNSEL--LIELTNYLINRE 298
>gi|350552260|ref|ZP_08921465.1| Geranyltranstransferase [Thiorhodospira sibirica ATCC 700588]
gi|349794913|gb|EGZ48721.1| Geranyltranstransferase [Thiorhodospira sibirica ATCC 700588]
Length = 294
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 122/294 (41%), Positives = 182/294 (61%), Gaps = 10/294 (3%)
Query: 66 EYMIRKAEQ-VNKALDEAVVLQPPV----KIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
E ++R+ +Q + LD LQPP +H+AMRYS + GGKR+RP+L A+ + +G
Sbjct: 2 EGLLREYQQRIETVLDHW--LQPPTTHPASLHQAMRYSAMDGGKRIRPILVYATAKALGV 59
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
S ACA+E+IH SLIHDDLP +DND+ RR +P H+ F E+TAILAGDA+ +LA
Sbjct: 60 PLSCVDGPACAVELIHVYSLIHDDLPAMDNDDLRRGRPTCHKAFDEATAILAGDAMQALA 119
Query: 181 LEHVAVNIAGVSPDRV-VRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
+ + + +V +R + + A G G+ G+ +D+AS G+ + L +LE +H+HK
Sbjct: 120 FQILVTDPEMTEDPKVRLRMMEILARASGSRGMAGGQAIDLASVGQQIDLVQLEDMHIHK 179
Query: 240 TAKLLEAAVVCGAV-IGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
T L+ A+V+ GA+ + + + +E++ YA+CIGL FQ+ DDILDV +E LGK G
Sbjct: 180 TGALIRASVLLGALSLVEIDEVRLEKLDRYAKCIGLAFQIRDDILDVESDTETLGKPQGS 239
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
D+A K TYP L+G+E +K A EL+ A+E ++ A L F+A YI R
Sbjct: 240 DMAQNKPTYPALIGMEASKQRARELVDDALESISPL-GPDADLLRFVARYIVER 292
>gi|206602067|gb|EDZ38549.1| Geranyltranstransferase [Leptospirillum sp. Group II '5-way CG']
Length = 303
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 117/268 (43%), Positives = 171/268 (63%), Gaps = 11/268 (4%)
Query: 93 KAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDE 152
++MRYSLLAGGKR+RP+L +A+ E + D +P LE+IHT SLIHDDLP +D+D
Sbjct: 41 ESMRYSLLAGGKRIRPVLAMAAMEALDRDPIPCIPLLAPLELIHTYSLIHDDLPSMDDDS 100
Query: 153 RRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVV------RAIAEMCSA 206
RR KP +H ++G++TAILAGDALL+ H ++ D++V + I E+
Sbjct: 101 LRRGKPTNHVIYGDATAILAGDALLT----HAFTLLSDPDYDKLVSFEIRLKIIHELSVG 156
Query: 207 MGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVR 266
G+ G+V G+ +DIASEGK ++L LE++H HKT L+ A++ GA++G ++ + ER+
Sbjct: 157 AGINGMVGGQQMDIASEGKALNLSSLEFLHQHKTGALIRASLRIGALLGKASSSDFERLD 216
Query: 267 NYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQ 326
Y + +G+ FQ+ DD+LDV + LGK A KD K TYP LMG+E A++ A L +
Sbjct: 217 RYGQAVGIAFQIADDLLDVEGDAALLGKAAQKDQDRHKNTYPGLMGVEKARNMARHKLNE 276
Query: 327 AIEELAYFEASKAAPLYFLANYIASRQN 354
A+E + F KA L LA+YI R+N
Sbjct: 277 ALEAIGSF-GEKAKHLRELASYIIERRN 303
>gi|363890208|ref|ZP_09317549.1| hypothetical protein HMPREF9628_01991 [Eubacteriaceae bacterium
CM5]
gi|361965889|gb|EHL18851.1| hypothetical protein HMPREF9628_01991 [Eubacteriaceae bacterium
CM5]
Length = 295
Score = 220 bits (561), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 113/269 (42%), Positives = 163/269 (60%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
L KI +MRYSL AGGKR+RP + + + D + AC +EMIHT SLIHDD
Sbjct: 26 LTYSSKILDSMRYSLSAGGKRIRPCIFVEVLKSYNIDVKKYLDVACVIEMIHTYSLIHDD 85
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMC 204
LP +DND RR KP +H V+G++ AILAGDALL+ A E + I V+A E+
Sbjct: 86 LPAMDNDTLRRGKPTNHMVYGDAIAILAGDALLNFAYELLFKFIKNNFQINSVKACEEIS 145
Query: 205 SAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVER 264
+ G+ G++ G+ DI +E KD+S+ LEYIH +KTAKL+ A++V + + ++E
Sbjct: 146 NCAGIYGMIGGQVSDIINENKDISVDNLEYIHENKTAKLIIASMVSAGYLANADETDMEH 205
Query: 265 VRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELL 324
+R YA +G+ FQ+ DDILD+ + + LGK+ GKD+ GK TYPK GIE +K +
Sbjct: 206 LRKYAYNLGMAFQISDDILDIIGNEKLLGKSVGKDVDEGKNTYPKYFGIEKSKEKLNVYV 265
Query: 325 GQAIEELAYFEASKAAPLYFLANYIASRQ 353
AI+E++ + + LA YI +R+
Sbjct: 266 NSAIDEISEIKDKDMSFFIELATYIGNRK 294
>gi|451948109|ref|YP_007468704.1| geranylgeranyl pyrophosphate synthase [Desulfocapsa sulfexigens DSM
10523]
gi|451907457|gb|AGF79051.1| geranylgeranyl pyrophosphate synthase [Desulfocapsa sulfexigens DSM
10523]
Length = 298
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/266 (46%), Positives = 165/266 (62%), Gaps = 5/266 (1%)
Query: 93 KAMRYSLLAGGKRVRPLLCIASCELVGG---DESWAMPAACALEMIHTMSLIHDDLPFLD 149
+AMRYSLLAGGKRVRP+LCIA+ VGG D+ +P ACALE IHT SLIHDDLP +D
Sbjct: 34 EAMRYSLLAGGKRVRPILCIAAARAVGGNTIDDQNILPVACALECIHTYSLIHDDLPAMD 93
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAE-MCSAMG 208
ND RR K +H ++GE+ AILAGD LL+ A + + G AI+ + A G
Sbjct: 94 NDALRRGKATNHVLYGEAGAILAGDGLLTWAFDLLCNPSHGNLDSEKKLAISHCIAHAAG 153
Query: 209 VEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNY 268
G+V G+ +DIASE + L+ IH KT L+ A+VV GA+ G + + E ++ Y
Sbjct: 154 SFGMVGGQALDIASENTRFPFETLQTIHRSKTGALITASVVSGAIAAGADREQSEALKQY 213
Query: 269 ARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAI 328
IGL FQ+VDD+L+ T ++E+LGK AG D+ GKATYP GIE + A + +A
Sbjct: 214 GHQIGLAFQIVDDLLNATATTEQLGKAAGSDIELGKATYPAYFGIEETRKRALNAIEKAK 273
Query: 329 EELAYFEASKAAPLYFLANYIASRQN 354
L F+ KA PL LA+YI +R +
Sbjct: 274 TCLKDFD-DKAQPLRLLADYIYTRSH 298
>gi|429727348|ref|ZP_19262122.1| putative geranyltranstransferase [Peptostreptococcus anaerobius VPI
4330]
gi|429152800|gb|EKX95610.1| putative geranyltranstransferase [Peptostreptococcus anaerobius VPI
4330]
Length = 295
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/265 (44%), Positives = 167/265 (63%), Gaps = 2/265 (0%)
Query: 91 IHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDN 150
I +AM YSL AGGKR+RP+L + + +L G +P + A+EMIHT SLIHDDLP LDN
Sbjct: 32 IFEAMNYSLRAGGKRLRPILLMEAYKLCQGQGEDFVPYSVAMEMIHTYSLIHDDLPALDN 91
Query: 151 DERRRSKPASHEVFGESTAILAGDALLSLALEH-VAVNIAGVSPDRVVRAIAEMCSAMGV 209
D+ RR KP +H VFGE+ AILAGDALL+ A E + P+ +RA E+ G+
Sbjct: 92 DDLRRGKPTNHIVFGEAMAILAGDALLNTAYETMLNATFKHPRPELSLRAAYEISRGAGI 151
Query: 210 EGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYA 269
G++ G+ VD+ SE K ++ +L+YIH++KTA ++ +V GA++ G + +E + YA
Sbjct: 152 YGMIGGQVVDVESEDKKINKDKLDYIHMNKTAAMIVGSVRAGAILAGIDEDRLESLTKYA 211
Query: 270 RCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIE 329
IGL FQ+VDDILD+ + LGK G DL + K+TYP L+GI +K L+ +A
Sbjct: 212 ENIGLAFQIVDDILDIEGDEKLLGKRVGSDLDNDKSTYPSLLGISESKKIVENLIEEAKI 271
Query: 330 ELAYFEASKAAPLYFLANYIASRQN 354
L F+ S A + LA++I RQN
Sbjct: 272 SLEVFD-SDAEFMNALADFIRDRQN 295
>gi|56477949|ref|YP_159538.1| polyprenyl synthetase [Aromatoleum aromaticum EbN1]
gi|56313992|emb|CAI08637.1| Polyprenyl synthetase (EC 2.5.1.10),gene: ISPA OR NE1160
[Aromatoleum aromaticum EbN1]
Length = 298
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/267 (43%), Positives = 168/267 (62%), Gaps = 2/267 (0%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPF 147
P ++H+AMRY++L GGKR+RPLL A+ LVG ACA+E+IH SL+HDDLP
Sbjct: 32 PARLHEAMRYAVLGGGKRIRPLLVHAAGGLVGAAPERLDKVACAVELIHAYSLVHDDLPC 91
Query: 148 LDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAM 207
+DND RR KP H + ++TA+L GD+L +LA + ++ + P + I ++ A
Sbjct: 92 MDNDVLRRGKPTVHVEYDDATALLVGDSLQALAFQSLSEHPLTEDPSEQLSMITQLARAS 151
Query: 208 GVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGG-NAIEVERVR 266
G G+ G+ +D+A+ GK +S +ELEY+H+HKT L+ A+V+ GA G ++ +ER+
Sbjct: 152 GSRGMAGGQAIDLAAVGKQLSREELEYMHIHKTGALIRASVLLGAACGARLDSDRLERLD 211
Query: 267 NYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQ 326
+Y + +GLLFQVVDDILD + LGKTAGKD + K TY L+G+ A++ A LL
Sbjct: 212 HYGKLVGLLFQVVDDILDTQSDTATLGKTAGKDADNNKPTYVTLLGMTEARALAESLLAD 271
Query: 327 AIEELAYFEASKAAPLYFLANYIASRQ 353
A E L F +AA L LA +I R+
Sbjct: 272 AREALTPF-GPQAARLDELATFIVHRR 297
>gi|345863395|ref|ZP_08815606.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl
pyrophosphate synthetase [endosymbiont of Tevnia
jerichonana (vent Tica)]
gi|345125473|gb|EGW55342.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl
pyrophosphate synthetase [endosymbiont of Tevnia
jerichonana (vent Tica)]
Length = 290
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 181/290 (62%), Gaps = 7/290 (2%)
Query: 68 MIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWA 125
M+ +V ALD+++ + P ++H+AMRY++L GGKR+RP+L A+ + +G + +
Sbjct: 1 MLFCQNRVEHALDKSLPAESTSPARLHQAMRYAVLGGGKRIRPILTYATGQALGVEINQL 60
Query: 126 MPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVA 185
AACA+EMIH SL+HDDLP +D+DE RR +P H+ + E+TAIL GDAL + A + +
Sbjct: 61 DTAACAVEMIHAYSLVHDDLPAMDDDELRRGRPTCHKAYDEATAILVGDALQTQAFQIIC 120
Query: 186 V--NIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
N+ + R + I + A G G+ G+ +D+ + G+++SL ELE +H+HKT L
Sbjct: 121 TSGNLHASAETR-LEMIETLSRASGSRGMCGGQALDLNAVGQELSLAELENLHIHKTGAL 179
Query: 244 LEAAVVCGAVIGGG-NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
+ A+V +++ + ++ +YA+C+GL FQ+ DDILDV +E LGKT GKD A
Sbjct: 180 IRASVNTASLLAPRLEPEQAHQLDHYAKCVGLAFQIRDDILDVEGDTETLGKTQGKDQAQ 239
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
K TYP L+G+ A+ A EL A L F+ SKA PL +LA+YI R
Sbjct: 240 DKPTYPALLGLNGAREKAAELQADAHRSLTGFD-SKADPLRWLADYIIGR 288
>gi|164688608|ref|ZP_02212636.1| hypothetical protein CLOBAR_02253 [Clostridium bartlettii DSM
16795]
gi|164603021|gb|EDQ96486.1| polyprenyl synthetase [Clostridium bartlettii DSM 16795]
Length = 295
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 110/265 (41%), Positives = 174/265 (65%), Gaps = 2/265 (0%)
Query: 91 IHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDN 150
I +AM YSL +GGKR+RP+L + S +++GGD +P A+EMIHT SLIHDDLP +DN
Sbjct: 32 IFEAMNYSLSSGGKRLRPILTLESAKIIGGDVKEVIPFCVAIEMIHTYSLIHDDLPAMDN 91
Query: 151 DERRRSKPASHEVFGESTAILAGDALLSLALE-HVAVNIAGVSPDRVVRAIAEMCSAMGV 209
D+ RR KP +H+VFG+ A LAGDALL+ A E + ++ + D ++AI E+ G+
Sbjct: 92 DDFRRGKPTNHKVFGDGMATLAGDALLNYAFEIMLKESLGKENADIRLKAIYEIARGAGI 151
Query: 210 EGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYA 269
G++ G+ VDI SE K + ++L++IH++KTA ++ + GA++G +++ + YA
Sbjct: 152 YGMIGGQVVDIESENKSIEKEKLDFIHMNKTAAMIIGCMRAGAIMGNACEDDLQNITKYA 211
Query: 270 RCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIE 329
+ IGL FQ+VDDILD+ + LGK G D+ + K+TYP L+G++ +K A +L+ +A +
Sbjct: 212 KNIGLAFQIVDDILDIVGDEKALGKPVGSDIENHKSTYPSLIGLDESKKVATDLIKEAKD 271
Query: 330 ELAYFEASKAAPLYFLANYIASRQN 354
+ + ++ L LA+YI SR +
Sbjct: 272 SIRKI-SGESRFLEDLADYIISRDH 295
>gi|291613174|ref|YP_003523331.1| polyprenyl synthetase [Sideroxydans lithotrophicus ES-1]
gi|291583286|gb|ADE10944.1| Polyprenyl synthetase [Sideroxydans lithotrophicus ES-1]
Length = 295
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/284 (42%), Positives = 178/284 (62%), Gaps = 3/284 (1%)
Query: 70 RKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAA 129
R + V + L + VL P ++H AMRYS+L GGKRVRPLL A+ EL G AA
Sbjct: 14 RFEDAVGRLLPQTDVL--PQRLHAAMRYSVLEGGKRVRPLLAYAAGELAGAPIERVEIAA 71
Query: 130 CALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIA 189
A+E+IH SL+HDD+P +D+D RR KP H + E+TA+L GDAL SLA + ++ +
Sbjct: 72 AAVELIHAYSLVHDDMPCMDDDVLRRGKPTCHIEYDEATALLVGDALQSLAFQLLSEHRL 131
Query: 190 GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVV 249
P R ++ + + +A G G+ G+ +D+AS GK +++ ELE +H++KT L+ AA++
Sbjct: 132 SDDPSRQLQMVRLLAAASGSRGMAGGQAIDLASVGKQLAMPELEQMHIYKTGALIRAAIL 191
Query: 250 CGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPK 309
GA G + +++++ Y +CIGL FQVVDD+LD + LGKTAGKD + K TY
Sbjct: 192 LGAHCGKLDQAQLDKLDRYGKCIGLAFQVVDDVLDSEADTATLGKTAGKDKDNDKPTYVT 251
Query: 310 LMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
L+G++ AK A L +A++ L F AS A L+ LA++I R+
Sbjct: 252 LLGVQAAKRMAATLHQEALDTLKEFGAS-AQRLHDLADFIVMRK 294
>gi|219669510|ref|YP_002459945.1| polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
gi|219539770|gb|ACL21509.1| Polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
Length = 290
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/267 (47%), Positives = 172/267 (64%), Gaps = 1/267 (0%)
Query: 87 PPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLP 146
P + ++M YSL AGGKR+RP+L +A+ VGGD +PA CALE+IHT SLIHDDLP
Sbjct: 24 PTGTLAESMNYSLSAGGKRIRPVLALAAAHAVGGDCEDILPAVCALELIHTYSLIHDDLP 83
Query: 147 FLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSA 206
+DND+ RR + A+H+VFGE AILAGDALL+ A E +A ++GV R +RA+ E+ A
Sbjct: 84 AMDNDDYRRGRLANHKVFGEGQAILAGDALLTYAFELLAQPMSGVDSQRQLRAVREVAQA 143
Query: 207 MGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVR 266
G EG+V G+ +D+ +E K ++L ELE +H KT +L A GA++ GG ++E +
Sbjct: 144 AGPEGMVGGQMLDLEAEEKQLNLAELEQVHRLKTGAILVVAARLGAILAGGTEEKIEALT 203
Query: 267 NYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQ 326
+YA+ IGL FQ+ DDILD+ SE LGK DL K+TYP LMG+ AK +
Sbjct: 204 SYAQAIGLAFQIKDDILDLESDSETLGKPVHSDLRQHKSTYPSLMGLAGAKLELKIKTDE 263
Query: 327 AIEELAYFEASKAAPLYFLANYIASRQ 353
A LA +A L+ LA+YIA R+
Sbjct: 264 AHAALAVL-GERAGFLHELADYIAQRK 289
>gi|260881089|ref|ZP_05403580.2| geranyltranstransferase [Mitsuokella multacida DSM 20544]
gi|260849479|gb|EEX69486.1| geranyltranstransferase [Mitsuokella multacida DSM 20544]
Length = 298
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 118/293 (40%), Positives = 179/293 (61%), Gaps = 4/293 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPV--KIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
+E + + V K L + + +PP+ ++ ++MRYSL+AGGKR+RP+L +A+ + VG
Sbjct: 8 LKEIWKERQQLVEKQLVKELEKEPPLDARLAESMRYSLMAGGKRLRPILLMAAADAVGAK 67
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
+ + ACALEMIHT SLIHDDLP +DND+ RR K +H+VFG+ A+LAGDALL+LA
Sbjct: 68 GTDYLTTACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGDGMAVLAGDALLTLAF 127
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
E + P ++R + E+ +A G+ G+V G+ +D+ SEG +S+++L +H+ KT
Sbjct: 128 EVIGRQ-QHTDPATLLRTVQEISTAAGMNGMVGGQAIDLESEGHRISMEQLRKMHMGKTG 186
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
L AA+ GA++ G + ++ + YA GL FQ+ DDILDVT +GK G DL
Sbjct: 187 ALFRAALRSGAILAGASEKQLAALTAYAEGFGLAFQITDDILDVTGDEALIGKPVGSDLR 246
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K+TY L +E A+ A E + A+ L F +A L L Y+ R+N
Sbjct: 247 NEKSTYVTLTSLEEAQRLAKETVDAAVAALDGF-GPEADFLRQLVRYMLERKN 298
>gi|393200428|ref|YP_006462270.1| geranylgeranyl pyrophosphate synthase [Solibacillus silvestris
StLB046]
gi|327439759|dbj|BAK16124.1| geranylgeranyl pyrophosphate synthase [Solibacillus silvestris
StLB046]
Length = 294
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 118/270 (43%), Positives = 166/270 (61%), Gaps = 2/270 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
++ P + ++M YSL AGGKR+RPL +A CE+ + A+EMIHT SLIHDD
Sbjct: 27 IKAPAHLKESMLYSLKAGGKRIRPLFVVAVCEMYNQSLETSYTVGSAVEMIHTYSLIHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMC 204
LP +D+DE RR KP +H V+GE+ A LAGDAL +LA +A + +S ++ + + +
Sbjct: 87 LPSMDDDELRRGKPTNHVVYGEALATLAGDALNTLAFGVIA-RLNNLSAEKRIELVNLLS 145
Query: 205 SAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVER 264
A G EG+V G+ +D+ E + ++LKELE +HV+KT LL ++ GAV+ + + E
Sbjct: 146 VAAGTEGMVGGQVLDMDGEKRLLNLKELETVHVNKTGALLRFSIEAGAVLANASISDREA 205
Query: 265 VRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELL 324
+ YA IGL FQ+ DDILD+ +SE+LGKTAGKD+AS K+TYP L+ +E AK E
Sbjct: 206 LVEYAHHIGLAFQIQDDILDIEGTSEQLGKTAGKDVASDKSTYPALLTLEGAKQKLDEHY 265
Query: 325 GQAIEELAYFEASKAAPLYFLANYIASRQN 354
AIE L + F A YI R N
Sbjct: 266 ELAIEALQKIDIDTTLLRQF-AQYIVRRSN 294
>gi|304436640|ref|ZP_07396609.1| geranyltranstransferase [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304370336|gb|EFM23992.1| geranyltranstransferase [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 291
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/287 (41%), Positives = 178/287 (62%), Gaps = 6/287 (2%)
Query: 68 MIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMP 127
M+ +A Q LD VL ++ +AM YSL+AGGKR+RP+L +A+ + VGGD + +
Sbjct: 11 MVERALQAE--LDRTDVLDDTLR--QAMAYSLMAGGKRLRPVLLMAAADAVGGDGAKFLS 66
Query: 128 AACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVN 187
ACALEMIHT SLIHDDLP +DND+ RR K +H+VFG+ AILAGD LL+LA V +
Sbjct: 67 VACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGDGIAILAGDGLLTLAFT-VILR 125
Query: 188 IAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAA 247
VS D ++R + E+ A G EG+V G+ +D+ +E +S++E+ +H+ KT L AA
Sbjct: 126 QQDVSADTLLRVVDEISRAAGAEGMVGGQVLDLRAEEHRISMEEMRRVHMGKTGALFRAA 185
Query: 248 VVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATY 307
+ GA++GG + ++ + YA GL FQ+ DDILDV ++E++GK G D + K+TY
Sbjct: 186 LRSGAILGGASEAQLASLTTYAEQFGLAFQITDDILDVVGTAEDIGKPVGSDEKNHKSTY 245
Query: 308 PKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L ++ A+ A + + A L F A +A L L +Y+ R+
Sbjct: 246 VSLTSLDEAQELAAQTVKDACAALRDFGA-EADFLRELVSYLVYRKQ 291
>gi|319651489|ref|ZP_08005617.1| geranyltranstransferase [Bacillus sp. 2_A_57_CT2]
gi|317396804|gb|EFV77514.1| geranyltranstransferase [Bacillus sp. 2_A_57_CT2]
Length = 296
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/253 (45%), Positives = 159/253 (62%), Gaps = 11/253 (4%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
L P ++ ++M YSL AGGKR+RP+L AS G D S + A A+EM+HT SLIHDD
Sbjct: 27 LNAPPEVKESMLYSLEAGGKRIRPMLLFASLAAFGEDTSKGLWTAAAIEMVHTYSLIHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRA----- 199
LP +DND+ RR KP +H+VFGE+ AILAGDALL+ + + +A +PD A
Sbjct: 87 LPSMDNDDLRRGKPTNHKVFGEAFAILAGDALLTYSFQTIAE-----TPDEFASAETKLS 141
Query: 200 -IAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGN 258
I E+ A G EG+V G+ DI EGK + L++LEYIHVHKT KLLE +VV GA++ +
Sbjct: 142 LIKELSKASGAEGMVGGQAADIKGEGKQLGLEDLEYIHVHKTGKLLECSVVSGAILANAS 201
Query: 259 AIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKS 318
++ + +A +GL FQ+ DDILD+ + E +GK G D + K+TYP L+ + AK
Sbjct: 202 QETIQALSKFAYHLGLAFQIRDDILDLEGTEEIIGKPVGSDESKDKSTYPSLLSMSGAKE 261
Query: 319 FAGELLGQAIEEL 331
E + A E+L
Sbjct: 262 ALEEHIRSAKEKL 274
>gi|78044434|ref|YP_360807.1| geranyltranstransferase [Carboxydothermus hydrogenoformans Z-2901]
gi|77996549|gb|ABB15448.1| geranyltranstransferase [Carboxydothermus hydrogenoformans Z-2901]
Length = 295
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/269 (44%), Positives = 170/269 (63%), Gaps = 3/269 (1%)
Query: 87 PPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLP 146
PPV IH+AM YSL AGGKR+RP+L +A+ E G +PAA +E +HT SLIHDDLP
Sbjct: 29 PPV-IHQAMNYSLKAGGKRLRPVLMLAAGEWSGIAPEKLLPAAVGVECLHTYSLIHDDLP 87
Query: 147 FLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNI-AGVSPDRVVRAIAEMCS 205
+DND+ RR KP +H+VFGE+ AILAGDALL+ A E A + G+ +RVVR I E+
Sbjct: 88 AMDNDDFRRGKPTNHKVFGEAIAILAGDALLTKAFELTAKTLEQGIPAERVVRVIQELAV 147
Query: 206 AMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERV 265
A G EGL+AG+ VD++S + L YIH++KTA+L+ +++ G ++ G E++ +
Sbjct: 148 ASGSEGLIAGQVVDLSSSEAKKDPEVLLYIHLNKTARLIRYSLIAGGILAGATEEEIKAL 207
Query: 266 RNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLG 325
+Y R +GL FQ+VDD+LDV +++GK G D + K TY L GIE K A E +
Sbjct: 208 DDYGRHLGLAFQIVDDLLDVVGDFQKIGKPVGSDEKNQKLTYVSLFGIEETKKRAEEEIN 267
Query: 326 QAIEELAYFEASKAAPLYFLANYIASRQN 354
A L + K++ LA +I R++
Sbjct: 268 AAKNVLKPY-GEKSSFFIKLAEFILKRES 295
>gi|30249147|ref|NP_841217.1| polyprenyl synthetase [Nitrosomonas europaea ATCC 19718]
gi|30180466|emb|CAD85071.1| Polyprenyl synthetase [Nitrosomonas europaea ATCC 19718]
Length = 297
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/267 (43%), Positives = 165/267 (61%), Gaps = 2/267 (0%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPF 147
P ++H AMRYS+L GGKRVRPLL A+ EL G D++ A A A+E+IH SL+HDDLP
Sbjct: 31 PARLHDAMRYSVLGGGKRVRPLLSFAAGELSGADKTHATIAGAAVELIHVYSLVHDDLPC 90
Query: 148 LDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAM 207
+DND RR KP H + E TA+L GD+L SLA + + P + + + A
Sbjct: 91 MDNDTLRRGKPTCHVRYDEPTALLVGDSLQSLAFQLLTETNLTEDPHVQLEMVRHLAFAA 150
Query: 208 GVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGG-NAIEVERVR 266
G G+ G+ +D+ S GK +SL ELE++H+HKT L+ AAV+ GA G + + + +
Sbjct: 151 GSRGMAGGQAIDLDSVGKTLSLPELEFMHIHKTGALIRAAVILGARCGNRLDETQFKLLD 210
Query: 267 NYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQ 326
++A+C+GL FQV+DDILD ++ LGKTAGKD + K TY ++GI+ A+ A EL +
Sbjct: 211 HFAKCMGLAFQVIDDILDTEATTAALGKTAGKDAENNKPTYVSILGIKQARELAHELRQE 270
Query: 327 AIEELAYFEASKAAPLYFLANYIASRQ 353
A L F S+A L + ++I R+
Sbjct: 271 ATGVLNQF-GSEALRLQQVTDFIVQRE 296
>gi|406665282|ref|ZP_11073056.1| Farnesyl diphosphate synthase [Bacillus isronensis B3W22]
gi|405387208|gb|EKB46633.1| Farnesyl diphosphate synthase [Bacillus isronensis B3W22]
Length = 294
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 118/270 (43%), Positives = 166/270 (61%), Gaps = 2/270 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
++ P + ++M YSL AGGKR+RPL +A CE+ + A+EMIHT SLIHDD
Sbjct: 27 IKAPAHLKESMLYSLKAGGKRIRPLFVVAVCEMYNQSLETSYTVGSAVEMIHTYSLIHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMC 204
LP +D+DE RR KP +H V+GE+ A LAGDAL +LA +A + +S ++ + + +
Sbjct: 87 LPSMDDDELRRGKPTNHVVYGEALATLAGDALNTLAFGVIA-RLNNLSAEKRIELVNLLS 145
Query: 205 SAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVER 264
A G EG+V G+ +D+ E + ++LKELE +HV+KT LL ++ GAV+ + + E
Sbjct: 146 VAAGAEGMVGGQVLDMDGEKRLLNLKELETVHVNKTGALLRFSIEAGAVLANASISDREA 205
Query: 265 VRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELL 324
+ YA IGL FQ+ DDILD+ +SE+LGKTAGKD+AS K+TYP L+ +E AK E
Sbjct: 206 LVEYAHHIGLAFQIQDDILDIEGTSEQLGKTAGKDVASDKSTYPALLTLEGAKQKLDEHY 265
Query: 325 GQAIEELAYFEASKAAPLYFLANYIASRQN 354
AIE L + F A YI R N
Sbjct: 266 ELAIEALQKIDIDTTLLRQF-AQYIVRRSN 294
>gi|354558197|ref|ZP_08977453.1| Polyprenyl synthetase [Desulfitobacterium metallireducens DSM
15288]
gi|353548922|gb|EHC18366.1| Polyprenyl synthetase [Desulfitobacterium metallireducens DSM
15288]
Length = 288
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 122/262 (46%), Positives = 173/262 (66%), Gaps = 2/262 (0%)
Query: 93 KAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDE 152
++MRYSL+ GGKR+RP+L +A+ E VGG +P+ACALE+IHT SLIHDDLP +DND+
Sbjct: 29 QSMRYSLVGGGKRIRPVLALAAAEAVGGQADSILPSACALELIHTYSLIHDDLPAMDNDD 88
Query: 153 RRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGL 212
RR + A+H+VFGE AILAGD LL+ A E +A + V+ +R +R I E+ A G EG+
Sbjct: 89 YRRGRLANHKVFGEGKAILAGDGLLTYAFELIARPLP-VNAERQLRVIQEVAQAAGPEGM 147
Query: 213 VAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCI 272
V G+ +D+ +EGK ++L E+E IH HKT +L + G ++GGG +++ + YA+ +
Sbjct: 148 VLGQVLDLEAEGKTLTLGEIEQIHQHKTGAMLVVSARMGGILGGGTEAQIQALTRYAQAL 207
Query: 273 GLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELA 332
GL FQ+ DDILD+ S LGK A DL K+TYP L+G+ AK + +A E L+
Sbjct: 208 GLAFQIKDDILDLEGDSATLGKPAQSDLEQEKSTYPSLLGLAGAKEELAVKIKEAHEALS 267
Query: 333 YFEASKAAPLYFLANYIASRQN 354
F S L+ LA+YIA R +
Sbjct: 268 VFTQS-VDFLHSLADYIADRMH 288
>gi|335357254|ref|ZP_08549124.1| geranyltranstransferase [Lactobacillus animalis KCTC 3501]
Length = 292
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 122/291 (41%), Positives = 172/291 (59%), Gaps = 17/291 (5%)
Query: 48 QNSVFESTDIPLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVR 107
Q + F++ IPL Y+ + E NK L AM+YSL AGGKR+R
Sbjct: 2 QLATFQNKMIPLLEQHMRHYLAQFTE--NKTL------------QAAMQYSLEAGGKRIR 47
Query: 108 PLLCIASCELVGGD-ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGE 166
PLL + C+ +G + + A +LE +HT SLIHDDLP +DND+ RR KP +H+VFG+
Sbjct: 48 PLLIMLICQSLGKKIDPDVLSVAGSLEFLHTYSLIHDDLPEMDNDDLRRGKPTNHKVFGQ 107
Query: 167 STAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKD 226
A+LAGDALL+ A +A +SP + V +AE+ A G G+VAG+ DI E
Sbjct: 108 DIAVLAGDALLTEAFGWIAKT--KLSPKKRVTLVAELAKAAGANGMVAGQTSDILGEKTT 165
Query: 227 VSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVT 286
++L EL +H +KT +LLE A GA++GG + + + + + GL FQ+ DDILDVT
Sbjct: 166 LTLAELMQVHKNKTGQLLEYACFAGAILGGATPKQEQALVTFGQKFGLAFQIYDDILDVT 225
Query: 287 KSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEAS 337
++ ELGKTA KD+A K TYP+L+G+E AK L QA ++L + S
Sbjct: 226 ATTAELGKTANKDVAENKNTYPRLLGLEGAKQALANTLEQAKDQLEFLAGS 276
>gi|94970459|ref|YP_592507.1| farnesyl-diphosphate synthase [Candidatus Koribacter versatilis
Ellin345]
gi|94552509|gb|ABF42433.1| farnesyl-diphosphate synthase [Candidatus Koribacter versatilis
Ellin345]
Length = 315
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 118/275 (42%), Positives = 172/275 (62%), Gaps = 13/275 (4%)
Query: 86 QPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAA-----CALEMIHTMSL 140
Q P IH+AMR+S+ AGGKR+RP+L + + ++ G ++P ALEM+HT SL
Sbjct: 48 QRPPSIHQAMRHSVFAGGKRLRPILVMEAARMITG----SLPDGVDELGAALEMLHTYSL 103
Query: 141 IHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAI 200
IHDDLP LDND+ RR +P H FGE+TAILAGDAL + A E V + + RV + I
Sbjct: 104 IHDDLPALDNDDLRRGRPTCHVAFGEATAILAGDALQTYAYE-VMARLRTTAEARV-QII 161
Query: 201 AEMCSAMG-VEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNA 259
E+ A G ++G++ G+ +D+ +E +EYIH KT L+ A+VV G + G +
Sbjct: 162 EEVAHATGTIDGMIGGQVLDLEAEHTHADAATVEYIHRSKTGALITASVVAGGLYAGADK 221
Query: 260 IEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSF 319
+V+R+R + + GL FQ+VDD+LDVT++SE+LGKTAGKD S K+T+P L G++ +
Sbjct: 222 AQVQRIREFGKSAGLAFQIVDDVLDVTQTSEQLGKTAGKDTKSEKSTWPSLYGVDKSLEM 281
Query: 320 AGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A EL+ A + L F +A L LA ++ R+
Sbjct: 282 ADELVYTANKRLDSF-GERATTLKELAKFLVERKK 315
>gi|126665230|ref|ZP_01736213.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17]
gi|126630600|gb|EBA01215.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17]
Length = 299
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 121/285 (42%), Positives = 176/285 (61%), Gaps = 10/285 (3%)
Query: 73 EQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACAL 132
+Q+ +D+A Q ++ AMRY LL GGKR+RP LC+A+ E VGG A+ ACAL
Sbjct: 22 QQLADYMDQASASQ---RLQDAMRYGLLGGGKRIRPALCLAAAEAVGGQRQIALAPACAL 78
Query: 133 EMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAV--NIAG 190
EMIH SL+HDDLP +DND+ RR + +H F ES+AILAGDAL + A +A ++
Sbjct: 79 EMIHAYSLMHDDLPAMDNDDLRRGRATAHIAFDESSAILAGDALQAEAFRVLATAPRLSA 138
Query: 191 VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVC 250
+V+A+A C G G+V G+ +D+ S + ++L +LE +H HKT L+EA+V
Sbjct: 139 EVKLAMVKALANAC---GANGMVGGQAIDLESVARTLTLDQLENMHRHKTGALIEASVHL 195
Query: 251 GAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPK 309
GA+ GG + ++ + YAR +GL FQV DD+LD+ +E +GKT G D+A GK TYP
Sbjct: 196 GALAGGVKDPALLDALARYARALGLAFQVQDDLLDIEGDTEVMGKTQGSDIARGKPTYPA 255
Query: 310 LMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L+G + A+ LL +A E L +A L+ +A+YI +R +
Sbjct: 256 LLGPKGARELLARLLAEAHESLKGL-GIQADALHAMADYIVARSH 299
>gi|402833960|ref|ZP_10882567.1| geranyltranstransferase [Selenomonas sp. CM52]
gi|402279029|gb|EJU28072.1| geranyltranstransferase [Selenomonas sp. CM52]
Length = 295
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 124/290 (42%), Positives = 177/290 (61%), Gaps = 11/290 (3%)
Query: 65 EEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW 124
EE ++R+ ++V A DE + KAM YSL+AGGKR+RP+L +A+ + VG D +
Sbjct: 17 EEGLLRELKKV-PAYDET--------LEKAMEYSLMAGGKRLRPVLLMAAADAVGKDGAA 67
Query: 125 AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV 184
+ CA+EMIHT SLIHDDLP +DND+ RR KP +H+VFG+ A+LAGDALL+LA E V
Sbjct: 68 FLTTGCAIEMIHTYSLIHDDLPAMDNDDYRRGKPTNHKVFGDGIAVLAGDALLTLAFE-V 126
Query: 185 AVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLL 244
+ G +P+ +V ++EM A G G+V G+ +D+ EG+ + L L IH+ KT L
Sbjct: 127 MLRQEGAAPETLVTVVSEMSRAAGPYGMVGGQVLDLEGEGRRLDLAALRKIHMGKTGALF 186
Query: 245 EAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGK 304
AA+ GA++ G E+ + YA GL FQ+ DDILDVT +GK G D+ + K
Sbjct: 187 CAAIRSGAILAGAKEEELAALTLYAERFGLAFQITDDILDVTGDEAAIGKPVGSDVRNEK 246
Query: 305 ATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
ATY L +E AK A + + +A+ L F +AA L LA ++ R+
Sbjct: 247 ATYVTLTSLEEAKKLAEDAVNEAVAALDIF-GERAAFLRDLALFLLRRKK 295
>gi|108805545|ref|YP_645482.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941]
gi|108766788|gb|ABG05670.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941]
Length = 299
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 116/265 (43%), Positives = 159/265 (60%), Gaps = 1/265 (0%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLD 149
++ +AMRYSLLAGGKRVRPLLC+ S L G +P+A A+E+IHT SLIHDDLP +D
Sbjct: 36 RLQEAMRYSLLAGGKRVRPLLCMESASLFGAPPERVLPSAAAIELIHTFSLIHDDLPAMD 95
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGV 209
ND+ RR KP SH+ FGE+ AILAGDA +L + + G S ++V+ + E+ A G+
Sbjct: 96 NDDFRRGKPTSHKKFGEAMAILAGDAFFGESLALITDHQEG-SAEQVLAVVRELAHATGL 154
Query: 210 EGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYA 269
GL G+ +D+ G+ KELE H HKT L+ A+ GA++ G +E + YA
Sbjct: 155 AGLAGGQALDLEHTGRRAGPKELELTHHHKTGALIRASARIGAILAGAGEEGLEAISRYA 214
Query: 270 RCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIE 329
+GL FQ+VDD+LD SSE LGK AG D GKAT+ + G+E A+ A +A+
Sbjct: 215 TELGLCFQIVDDVLDAVGSSERLGKRAGGDAERGKATFVSVFGLEGARREADAACERALR 274
Query: 330 ELAYFEASKAAPLYFLANYIASRQN 354
L E + L LA ++ R
Sbjct: 275 ALGRLEGRDTSRLEALALFVRDRDR 299
>gi|389792829|ref|ZP_10196011.1| farnesyl-diphosphate synthase [Rhodanobacter fulvus Jip2]
gi|388435693|gb|EIL92590.1| farnesyl-diphosphate synthase [Rhodanobacter fulvus Jip2]
Length = 293
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 123/295 (41%), Positives = 184/295 (62%), Gaps = 7/295 (2%)
Query: 63 PFEEYMIRKAEQVNKALDEAV--VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
P + +I +AEQ ALD + Q P +H+AMRY++L GGKR+RPLL A+ + +G
Sbjct: 3 PALQALILRAEQ---ALDHRLPPADQSPADLHRAMRYAVLGGGKRLRPLLVYATAQALGE 59
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
D AACA+E+IH SL+HDDLP +D+D RR +P H VFGE+ AILAGDAL +LA
Sbjct: 60 DGPQLDAAACAVELIHAYSLVHDDLPAMDDDALRRGRPTCHVVFGEAMAILAGDALQALA 119
Query: 181 LEHVAVNIA-GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
E +A + P + + + A G EG+ G+ +D+A+ G+ ++L +LE++H K
Sbjct: 120 FEILAEDTTRQTDPATGMAMLRTLGRACGAEGMAGGQALDLAAVGQPLTLAQLEHMHACK 179
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T L+ A+V GA+ GG+A ++ + +YA +GL FQV DDILDV S +GKTAGKD
Sbjct: 180 TGALIRASVRLGALAAGGDADVLQALDDYANAVGLAFQVRDDILDVEGESIVIGKTAGKD 239
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A+GK T+P ++G++ +++ EL A+ ++ + A L LA+Y A R +
Sbjct: 240 AAAGKPTFPSIIGLDASRARLAELTNAALAAISPL-GERGALLRELAHYAAQRAS 293
>gi|386714769|ref|YP_006181092.1| geranyltranstransferase [Halobacillus halophilus DSM 2266]
gi|384074325|emb|CCG45818.1| geranyltranstransferase [Halobacillus halophilus DSM 2266]
Length = 294
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 114/259 (44%), Positives = 162/259 (62%), Gaps = 2/259 (0%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVV-LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
T +Y++ K + +N+ L V P ++ AM YS+ AGGKR+RP+L IA+ E G
Sbjct: 2 TVILSDYLLEKRQLINEQLIHYVRDYTVPGRLQDAMLYSIEAGGKRLRPILLIATAEAFG 61
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
M AC LEMIHT SLIHDDLP +DND+ RR P SH F E+TAILAGDALL+L
Sbjct: 62 AKVDKTMAVACGLEMIHTYSLIHDDLPAMDNDDFRRGLPTSHRRFDEATAILAGDALLTL 121
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
+ E + VN ++ V I E+ A G G+V G+ D+ SE K + L+ELE IH K
Sbjct: 122 SSE-IIVNDQELNDRERVFLIQELSRASGASGMVEGQMQDMLSEDKQIPLEELENIHKKK 180
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T KLL A++ GA +G + + + ++ +GL+FQ+ DDILDVT +E++GK G D
Sbjct: 181 TGKLLNFAIIAGAFLGNASDEKFDEMKKMGEALGLIFQIQDDILDVTGDAEKIGKPVGSD 240
Query: 300 LASGKATYPKLMGIENAKS 318
+ K+TYP+L+G++ A++
Sbjct: 241 EGNRKSTYPQLLGLDGART 259
>gi|363892252|ref|ZP_09319420.1| hypothetical protein HMPREF9630_00413 [Eubacteriaceae bacterium
CM2]
gi|402838806|ref|ZP_10887309.1| polyprenyl synthetase [Eubacteriaceae bacterium OBRC8]
gi|361964202|gb|EHL17246.1| hypothetical protein HMPREF9630_00413 [Eubacteriaceae bacterium
CM2]
gi|402272366|gb|EJU21587.1| polyprenyl synthetase [Eubacteriaceae bacterium OBRC8]
Length = 295
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 170/292 (58%), Gaps = 7/292 (2%)
Query: 69 IRKAEQVNKALDE-------AVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
I+ Q +K L E + L KI +MRYSL AGGKR+RP + + + D
Sbjct: 3 IKNVMQADKKLIEDRLMELMNINLTYSSKILDSMRYSLSAGGKRIRPCIFVEVLKSYNID 62
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
+ AC +EMIHT SLIHDDLP +DND RR KP +H V+G++ AILAGDALL+ A
Sbjct: 63 VKKYLDVACVIEMIHTYSLIHDDLPAMDNDTLRRGKPTNHMVYGDAIAILAGDALLNFAY 122
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
E + I V+A E+ + G+ G++ G+ DI +E KD+S LEYIH +KTA
Sbjct: 123 ELLFKFIKNNFQINSVKACEEISNCAGIYGMIGGQVSDIINENKDISSGNLEYIHENKTA 182
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
KL+ A++V + + ++E +R YA +G+ FQ+ DDILD+ + + LGK+ GKD+
Sbjct: 183 KLIIASMVSAGYLANADENDMEHLRKYAYNLGMAFQISDDILDIIGNEKLLGKSVGKDVD 242
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
GK TYPK GIE +K + AI+E++ + + LA YI +R+
Sbjct: 243 EGKNTYPKYFGIEKSKEKLNGYVNSAIDEISEIKDKDMSFFAQLATYIGNRK 294
>gi|392426568|ref|YP_006467562.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus
acidiphilus SJ4]
gi|391356531|gb|AFM42230.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus
acidiphilus SJ4]
Length = 291
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 127/264 (48%), Positives = 174/264 (65%), Gaps = 2/264 (0%)
Query: 91 IHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDN 150
+ ++M YSL+ GGKR+RP+L +A+ E VGG+ +PAA ALE+IHT SLIHDDLP +DN
Sbjct: 30 LSESMSYSLVGGGKRIRPVLALAAAEAVGGNPEKILPAAIALELIHTYSLIHDDLPAMDN 89
Query: 151 DERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVE 210
D+ RR + ++H+VFGE+ AILAGD LL+ A E +A I G P++ +R I E+ +A G
Sbjct: 90 DDYRRGRLSNHKVFGEANAILAGDGLLTYAFEFLADPILG-QPEKQLRVIREVAAAAGKN 148
Query: 211 GLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYAR 270
G+V G+ +DIA E K +SL E+E IH KT LL A+ G ++ GG+ ++E + NYA+
Sbjct: 149 GMVGGQVLDIAGEEKKLSLTEIEEIHKAKTGALLIASARLGGILAGGSEEQIEALTNYAQ 208
Query: 271 CIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEE 330
+GL FQ+ DDILDV SE LGK AG DL GK+TY L+G+E AK +A
Sbjct: 209 ALGLAFQIKDDILDVIGDSETLGKPAGSDLRQGKSTYVSLLGLEEAKHQLHAQTQRAQSA 268
Query: 331 LAYFEASKAAPLYFLANYIASRQN 354
L FE + + L LA YI RQ+
Sbjct: 269 LKLFERN-FSFLSELAVYIEQRQH 291
>gi|375085374|ref|ZP_09732017.1| hypothetical protein HMPREF9454_00628 [Megamonas funiformis YIT
11815]
gi|374567392|gb|EHR38611.1| hypothetical protein HMPREF9454_00628 [Megamonas funiformis YIT
11815]
Length = 292
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 117/292 (40%), Positives = 176/292 (60%), Gaps = 4/292 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVK--IHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
+ YM RK + +N+ L+E + + KAM YSL+AGGKR+RP+L +A+ + +G D
Sbjct: 2 MKSYMQRKMDLINQQLNEIYTENMALNKDLAKAMNYSLMAGGKRLRPILIMAAADALGVD 61
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
+ + ++E IHT SLIHDDLP +DND+ RR K +H+VFGE+ AILAGDALL++A
Sbjct: 62 GEKFLRLSTSIEFIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGEALAILAGDALLTMAF 121
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
E +A + V + V+ I EM A G EG+V G+ +D+ SE K + ++ L+ +H KT
Sbjct: 122 EIIATD-KNVDAETKVKIITEMSKAAGAEGMVGGQVIDMQSENKKIDIQTLKQMHAAKTG 180
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
L AA+ GA++ G + ++ + YAR GL FQ+ DD+LDV + +GK G D
Sbjct: 181 ALFCAAIRSGAILAGADEKQLANLTEYARQFGLAFQITDDVLDVVGDEKTIGKPVGSDEK 240
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
+ K+TY L +E+AK+ A E + +A L F A L L +Y+ +R
Sbjct: 241 NHKSTYVTLGSLESAKALAQEAVDKAKASLVDF-GENAEFLRALVDYLITRN 291
>gi|260887337|ref|ZP_05898600.1| geranyltranstransferase [Selenomonas sputigena ATCC 35185]
gi|330838910|ref|YP_004413490.1| Polyprenyl synthetase [Selenomonas sputigena ATCC 35185]
gi|260862973|gb|EEX77473.1| geranyltranstransferase [Selenomonas sputigena ATCC 35185]
gi|329746674|gb|AEC00031.1| Polyprenyl synthetase [Selenomonas sputigena ATCC 35185]
Length = 295
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 124/290 (42%), Positives = 177/290 (61%), Gaps = 11/290 (3%)
Query: 65 EEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW 124
EE ++R+ ++V A DE + KAM YSL+AGGKR+RP+L +A+ + VG D +
Sbjct: 17 EEGLLRELKKV-PAYDET--------LEKAMEYSLMAGGKRLRPVLLMAAADAVGKDGAA 67
Query: 125 AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV 184
+ CA+EMIHT SLIHDDLP +DND+ RR KP +H+VFG+ A+LAGDALL+LA E V
Sbjct: 68 FLTTGCAIEMIHTYSLIHDDLPAMDNDDYRRGKPTNHKVFGDGIAVLAGDALLTLAFE-V 126
Query: 185 AVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLL 244
+ G +P+ +V ++EM A G G+V G+ +D+ EG+ + L L IH+ KT L
Sbjct: 127 MLRQEGAAPETLVTVVSEMSRAAGPYGMVGGQVLDLEGEGRRLDLAALRKIHMGKTGALF 186
Query: 245 EAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGK 304
AA+ GA++ G E+ + YA GL FQ+ DDILDVT +GK G D+ + K
Sbjct: 187 CAAIRSGAILAGAKEEELAALTLYAERFGLAFQITDDILDVTGDEAAIGKPVGSDVRNEK 246
Query: 305 ATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
ATY L +E AK A + + +A+ L F +AA L LA ++ R+
Sbjct: 247 ATYVTLTSLEEAKKLAEDAVDEAVVALDIF-GERAAFLRDLALFLLGRKK 295
>gi|363893702|ref|ZP_09320797.1| hypothetical protein HMPREF9629_01123 [Eubacteriaceae bacterium
ACC19a]
gi|361963504|gb|EHL16576.1| hypothetical protein HMPREF9629_01123 [Eubacteriaceae bacterium
ACC19a]
Length = 295
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 113/271 (41%), Positives = 163/271 (60%)
Query: 83 VVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIH 142
+ L KI +MRYSL AGGKR+RP + + + D + AC +EMIHT SLIH
Sbjct: 24 INLTYSSKILDSMRYSLSAGGKRIRPCIFVEVLKSYNIDVEKYLDVACVIEMIHTYSLIH 83
Query: 143 DDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAE 202
DDLP +DND RR KP +H V+G++ AILAGDALL+ A E + I V+A E
Sbjct: 84 DDLPAMDNDTLRRGKPTNHMVYGDAIAILAGDALLNFAYELLFKFIKNNFQINSVKACEE 143
Query: 203 MCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEV 262
+ + G+ G++ G+ DI +E KD+S LEYIH +KTAKL+ A++V + + ++
Sbjct: 144 ISNCAGIYGMIGGQVSDIINENKDISSGNLEYIHENKTAKLIIASMVSAGYLANADENDM 203
Query: 263 ERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGE 322
E +R YA +G+ FQ+ DDILD+ + + LGK+ GKD+ GK TYPK GIE +K
Sbjct: 204 EHLRKYAYNLGMAFQISDDILDIIGNEKLLGKSVGKDVDEGKNTYPKYFGIEKSKEKLNG 263
Query: 323 LLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
+ AI+E++ + + LA YI +R+
Sbjct: 264 YVNSAIDEISEIKDKDMSFFAQLATYIGNRK 294
>gi|320529116|ref|ZP_08030208.1| putative geranyltranstransferase [Selenomonas artemidis F0399]
gi|320138746|gb|EFW30636.1| putative geranyltranstransferase [Selenomonas artemidis F0399]
Length = 295
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 118/276 (42%), Positives = 174/276 (63%), Gaps = 4/276 (1%)
Query: 79 LDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTM 138
LD +L K+ +M YSL+AGGKR+RP+L +A+ + VG D + + AACALEMIHT
Sbjct: 24 LDRTDILDD--KLRASMAYSLMAGGKRLRPILLMAAADAVGVDGTKFITAACALEMIHTY 81
Query: 139 SLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVR 198
SLIHDDLP +DND+ RR K +H+V+ E TAILAGDALL+LA V + V +R++R
Sbjct: 82 SLIHDDLPAMDNDDYRRGKLTNHKVYDEGTAILAGDALLTLAFT-VILRQQDVPAERLLR 140
Query: 199 AIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGN 258
+ E A G EG+V G+ +D+ +E + +S++EL +H+ KT L AA+ CGA++ G +
Sbjct: 141 VVDETGRAAGAEGMVGGQMLDLEAENRRISMEELRRVHMGKTGALFRAALRCGAILAGAS 200
Query: 259 AIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKS 318
++ + YA GL FQ+ DDILDV ++E++GK G D + K+TY L ++ A+S
Sbjct: 201 ERQLAALTAYADHFGLAFQITDDILDVIGTAEDIGKPVGSDEKNHKSTYVTLTSLDEAQS 260
Query: 319 FAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A + + A + L F +AA L L Y+ R+
Sbjct: 261 LARQTVESAADALHIF-GDEAAFLRELVLYLVRRKQ 295
>gi|403744977|ref|ZP_10954005.1| Polyprenyl synthetase [Alicyclobacillus hesperidum URH17-3-68]
gi|403121632|gb|EJY55909.1| Polyprenyl synthetase [Alicyclobacillus hesperidum URH17-3-68]
Length = 291
Score = 217 bits (552), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 110/243 (45%), Positives = 158/243 (65%)
Query: 89 VKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFL 148
++++AM YSL+A GKR+RP L +A+ + G + +PAA ALEMIH SLIHDDLP +
Sbjct: 27 TRLYEAMNYSLMADGKRLRPALLMATAQTFGVERQRVLPAAAALEMIHCYSLIHDDLPCM 86
Query: 149 DNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMG 208
D+D RR +P +H VFGE+ A+LAGD LL+ A +A I V +R +R I + S G
Sbjct: 87 DDDSLRRGQPTNHVVFGEAIALLAGDGLLTEAFALLARPIPEVPAERQLRMIQILASRAG 146
Query: 209 VEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNY 268
+G+V G+ VD+ G +L ++++IH+HKTA+L++AAV G++ + E + Y
Sbjct: 147 ADGMVGGQAVDVERTGGQGTLTDVQFIHLHKTARLIQAAVEIGSLFPDLDEKAQEALSTY 206
Query: 269 ARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAI 328
+GL FQ+VDD+LDV S+ ELGKTAGKD A GK TYP+ +GIE + A E + +
Sbjct: 207 GEALGLAFQMVDDVLDVVGSTSELGKTAGKDEAEGKLTYPRFIGIEETRRLAEETIARGQ 266
Query: 329 EEL 331
E L
Sbjct: 267 EAL 269
>gi|121593453|ref|YP_985349.1| farnesyl-diphosphate synthase [Acidovorax sp. JS42]
gi|120605533|gb|ABM41273.1| farnesyl-diphosphate synthase [Acidovorax sp. JS42]
Length = 311
Score = 217 bits (552), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 178/295 (60%), Gaps = 1/295 (0%)
Query: 60 PTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
P F F ++M + +V +AL V P + +AMRY++L GGKR+RPLL +A+ VG
Sbjct: 18 PGFDFNDWMRAELARVEEALSRWVCHDAPAGLGEAMRYAVLDGGKRLRPLLVLAASHAVG 77
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
G A+ AACA+E+IH SL+HDD+P +DND RR KP H FGE+ A+LAGDAL +L
Sbjct: 78 GQPEAALRAACAVELIHAYSLVHDDMPCMDNDVMRRGKPTVHVRFGEARALLAGDALQAL 137
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A E + GV R E+ A G G+ G+ +D+AS G +S +L ++H K
Sbjct: 138 AFELLTPE-DGVPLAMQARLCRELAQAAGAAGMAGGQAIDLASVGLQLSEDQLRHMHSLK 196
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T LL+A+VV GAV G ++ + +Y +GL FQVVDD+LDVT+ S LGKTAGKD
Sbjct: 197 TGALLQASVVMGAVCGQPTGAALQALTDYGAAMGLAFQVVDDVLDVTQDSATLGKTAGKD 256
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
AS K TY LMG+++A+++A L QA+ L + L LA+ + R +
Sbjct: 257 AASDKPTYVSLMGLQSARAYADVLHAQALAALVASGLTDTRALAALADMVVRRSH 311
>gi|328956986|ref|YP_004374372.1| geranyltranstransferase [Carnobacterium sp. 17-4]
gi|328673310|gb|AEB29356.1| geranyltranstransferase [Carnobacterium sp. 17-4]
Length = 299
Score = 217 bits (552), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 113/227 (49%), Positives = 152/227 (66%), Gaps = 2/227 (0%)
Query: 91 IHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDN 150
+H+AM YSL AGGKR+RPLL +A+ + +GGD + ALE IHT SLIHDDLP +DN
Sbjct: 32 LHEAMFYSLEAGGKRIRPLLLLATIQSLGGDIRKGYAVSAALEFIHTYSLIHDDLPAMDN 91
Query: 151 DERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVE 210
D+ RR KP SH V+GE TAILAGDALL+ A E +AV+ A SP++ V+ I + + G E
Sbjct: 92 DDLRRGKPTSHIVYGEDTAILAGDALLTQAFEIIAVSDA--SPEKKVKLILALAKSAGPE 149
Query: 211 GLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYAR 270
G++ G+ DI E KD+SL+EL++IH +KT +LL+ + VI E++ YA
Sbjct: 150 GMILGQMADIQGETKDLSLEELQFIHRNKTGELLKFPIYAACVIADAATEVEEQLMGYAE 209
Query: 271 CIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAK 317
IGL +Q+ DDILDV + EE+GK G D A K+TYP L+ +E AK
Sbjct: 210 HIGLAYQIRDDILDVIGNVEEIGKNIGMDAAHNKSTYPGLLTLEGAK 256
>gi|196230692|ref|ZP_03129553.1| Polyprenyl synthetase [Chthoniobacter flavus Ellin428]
gi|196225033|gb|EDY19542.1| Polyprenyl synthetase [Chthoniobacter flavus Ellin428]
Length = 293
Score = 216 bits (551), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 129/291 (44%), Positives = 185/291 (63%), Gaps = 4/291 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAV--VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
+ Y+ + + +++ALD + P IHKAMRYSL AGGKR+RP L +A+ E G+
Sbjct: 3 LKSYLTARGKLIDQALDRFLPRASVKPRTIHKAMRYSLFAGGKRLRPALTLAAAEACDGE 62
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
+ A+PAACA+E IHT SLIHDDLP +D+D+ RR +P SH+VFGE A+LAGDALL++A
Sbjct: 63 VARALPAACAVECIHTYSLIHDDLPCMDDDDLRRGRPTSHKVFGEGVAVLAGDALLTIAF 122
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
E +A S ++ I E+ A G + L+ G+ D+ EGK +S EL+YIH KTA
Sbjct: 123 EILA-QAKETSRYKMPALIGELAGASGSQWLIGGQVADLEGEGKKISGAELKYIHRCKTA 181
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
LL A++ G + + ++ + + + +GL FQV+DDILDVT+++E+LGKTAGKD+A
Sbjct: 182 ALLTASIRLGGMSANASPARLKNLTEFGQSLGLAFQVIDDILDVTQTTEKLGKTAGKDVA 241
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
+ KATYP + G+E ++ A L A L F S A L A+Y+ R
Sbjct: 242 ATKATYPAIFGLERSREEAHRLTLAAHAALKPFGKS-GATLRAFADYLLVR 291
>gi|429124140|ref|ZP_19184672.1| geranylgeranyl pyrophosphate synthase [Brachyspira hampsonii 30446]
gi|426279870|gb|EKV56889.1| geranylgeranyl pyrophosphate synthase [Brachyspira hampsonii 30446]
Length = 294
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 119/295 (40%), Positives = 177/295 (60%), Gaps = 7/295 (2%)
Query: 64 FEEYMIRKAEQVNKALD---EAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
+EYM + E++NK +D E ++ + ++Y L AGGKR+RP+L +CEL G
Sbjct: 3 LKEYMNARLEEINKTIDNVFEKSNIELENSFIEMLKYPLDAGGKRLRPILTCLACELFEG 62
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
D ++ A +LE+IHT SL+HDDLP +DND+ RR KP +H +GE+ AIL GD LL+ A
Sbjct: 63 DYKKSIIPAVSLELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDGLLTYA 122
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKT 240
+ ++ V + + + E+ A GV G+V G+F+D+ E K+++ L+ +H KT
Sbjct: 123 FQLLSK--TDVKDSTLRKLLFELSYAAGVNGMVMGQFIDLYYEEKEINFDMLKVLHAKKT 180
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
++ AV GA I N ++E + YA +GL FQ+ DDILDV +E LGKT GKD
Sbjct: 181 GAMIRGAVRLGA-ISSENDNDIENITKYAEAVGLAFQIQDDILDVISDNETLGKTVGKDE 239
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYF-LANYIASRQN 354
GK TY K G+E AK A ++ +AIE L ++ S+A + LANYI R++
Sbjct: 240 KEGKLTYVKQFGLEGAKKEAKKVTEKAIEYLKPYKDSEAKNILIELANYIIERKS 294
>gi|388522881|gb|AFK49502.1| unknown [Medicago truncatula]
Length = 235
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 102/156 (65%), Positives = 125/156 (80%)
Query: 60 PTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
P F F+ YMI KA +VNKALD+AV L+ P+K+H+AMRYSLLAGGKRVRP+LC+A+ ELVG
Sbjct: 77 PIFNFKSYMIEKATRVNKALDDAVSLREPLKVHEAMRYSLLAGGKRVRPVLCLAARELVG 136
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
G E AMPAACA+EMIHTMSLIHDDLP +DND+ RR KP +H+VFGE A+LAGDALL+
Sbjct: 137 GTEPMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAF 196
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAG 215
A EH+AV+ VSP R+VRAI E+ ++G E G
Sbjct: 197 AFEHIAVSTVDVSPARIVRAIGELAKSIGSERTRCG 232
>gi|385799804|ref|YP_005836208.1| polyprenyl synthetase [Halanaerobium praevalens DSM 2228]
gi|309389168|gb|ADO77048.1| Polyprenyl synthetase [Halanaerobium praevalens DSM 2228]
Length = 293
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 120/282 (42%), Positives = 177/282 (62%), Gaps = 5/282 (1%)
Query: 73 EQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACAL 132
E + K LD L P ++ K+M+Y+LL+GGKR+RP+L + EL+ G+ A+ A AL
Sbjct: 17 ENLIKLLDCQDELAP--QLTKSMKYTLLSGGKRIRPILTLLIAELLEGNYQAALKAGSAL 74
Query: 133 EMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVS 192
EMIH+ SLIHDDLP +D+D+ RR K +H VFGE+TAILAGD LL+ A + +A +
Sbjct: 75 EMIHSYSLIHDDLPAMDDDKLRRGKKTNHLVFGEATAILAGDGLLTYAFQVLAD--LELK 132
Query: 193 PDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGA 252
PD V+ IA G +G+V G+ +D+ +E KD++L+E++ +H KT L++A+V+ G
Sbjct: 133 PDLKVKIIANTAKFSGYQGMVGGQVLDLEAENKDLTLQEMQKVHQAKTGALIKASVLNGV 192
Query: 253 VIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMG 312
E + + YA IG+LFQ+VDD+LD+T +E +GK G+D KATYPKL+G
Sbjct: 193 YCSDFKPEEKKALLTYAEKIGVLFQIVDDLLDLTGETEAMGKVVGRDQELNKATYPKLLG 252
Query: 313 IENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
++ A+ A + +A E L F KA L L ++I RQ
Sbjct: 253 LKKAQKEAEKYAKEAKEALIIF-GKKAEKLEALIDFILKRQQ 293
>gi|149181862|ref|ZP_01860351.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
sp. SG-1]
gi|148850401|gb|EDL64562.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
sp. SG-1]
Length = 295
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/267 (43%), Positives = 166/267 (62%), Gaps = 2/267 (0%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPF 147
P K+ +AM YSL AGGKR+RPLL A+ +G D + +A ALEMIHT SLIHDDLP
Sbjct: 31 PEKVKEAMAYSLKAGGKRIRPLLLFATLHTLGKDPKIGLESAAALEMIHTYSLIHDDLPS 90
Query: 148 LDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAM 207
+DND+ RR KP +H+VFGE+TAILAGD LL+ + E V VS ++++R ++ + +
Sbjct: 91 MDNDDLRRGKPTNHKVFGEATAILAGDGLLTYSFE-VLAGTPDVSAEKLIRLVSLLAKSA 149
Query: 208 GVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRN 267
G EG+V G+ D+ E + +S++ELEYIH +KT +LL +V+ A++ ++ +
Sbjct: 150 GPEGMVGGQAADMEGESQSLSVEELEYIHKNKTGRLLAFSVMAAAILADSTEEQISLLEE 209
Query: 268 YARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQA 327
YA IGL FQ+ DDILDV S E++GK G D K+TYP L+ +E AK L +
Sbjct: 210 YAFHIGLAFQIQDDILDVEGSEEKIGKPVGSDENKFKSTYPALLTLEGAKEKLRNHLQKG 269
Query: 328 IEELAYFEASKAAPLYFLANYIASRQN 354
LA + L +A+ IASR +
Sbjct: 270 KSALAASDLDNGL-LVEIADMIASRDH 295
>gi|255577858|ref|XP_002529802.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
gi|223530713|gb|EEF32584.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
Length = 345
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 120/296 (40%), Positives = 179/296 (60%), Gaps = 15/296 (5%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLA-GGKRVRPLLCIASCELVGG 120
F + Y ++N+ LD+A+ +Q P +I++AMRYS LA G KR P++C+A+CEL GG
Sbjct: 52 FDLKTYWTTLIAEINQKLDQAIPVQFPEQIYEAMRYSALAKGAKRAPPVMCVAACELFGG 111
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
+ A P ACALEM+HT SLIHDDLP +D+D RR +P++H ++G AILAGDAL L
Sbjct: 112 NRLAAFPTACALEMVHTASLIHDDLPCMDDDPSRRGQPSNHTIYGVDMAILAGDALFPLG 171
Query: 181 LEHVAVNI-AGVSPD-RVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
H+ + G+ P+ R++R IAE+ A+G G+ AG+F+D+ EG +E+
Sbjct: 172 YRHIVSHTPTGLVPEPRLLRVIAEIARAVGSTGMAAGQFLDL--EGGP---SFVEFAQEK 226
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
K ++ E + VCG ++ G E++R+R Y R +G+L+QV+DD+L+ ++ + K +
Sbjct: 227 KYGEMSECSAVCGGLLAGAEDDEIQRLRRYGRAVGVLYQVIDDVLE----AKAMNKENEE 282
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFE--ASKAAPLYFLANYIASR 352
+GK +Y L GIE A A EL QA +EL F PLY +Y A R
Sbjct: 283 KRRNGK-SYVSLYGIEKAMEVAEELRTQAKKELDGFAKYGDSVMPLYSFVDYAADR 337
>gi|325516286|gb|ADZ24721.1| geranylgeranyl pyrophosphate synthase 4 [Solanum pennellii]
Length = 334
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 119/296 (40%), Positives = 174/296 (58%), Gaps = 15/296 (5%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLA-GGKRVRPLLCIASCELVGG 120
F + Y +N+ LDEAV ++ P +I++AMRYS+LA G KR P++C+A+CEL GG
Sbjct: 41 FDLKTYWTTLIVDINQKLDEAVPVKYPNQIYEAMRYSVLAKGAKRSPPIMCVAACELFGG 100
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
+ A P ACALEM+H SLIHDDLP +D+D RR PA+H VFG AILAGDAL L
Sbjct: 101 NRLAAFPTACALEMVHAASLIHDDLPCMDDDTTRRGLPANHTVFGVDMAILAGDALFPLG 160
Query: 181 LEHVAVNIAG--VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
+H+ + V DR++R I E+ A+G G+ AG+F+D+ EG ++++
Sbjct: 161 FQHIVSHTPSDLVPEDRILRVITEIARAVGSTGMAAGQFLDL--EG---GPNAVDFVQEK 215
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
K ++ E + VCGA++ G + E++ +R Y R +G+L++VVDDIL+ K+ ++ +
Sbjct: 216 KYGEMGECSAVCGALLAGASDEEIQHMRKYGRAVGVLYRVVDDILEAKKTEDKT-----E 270
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFE--ASKAAPLYFLANYIASR 352
+Y + GIE A A +L QA EL E K PLY +Y A R
Sbjct: 271 GKKKKGKSYVSVYGIEKAVKVAEDLRAQAKRELVGLEKYGDKVMPLYSFLDYAADR 326
>gi|312622735|ref|YP_004024348.1| polyprenyl synthetase [Caldicellulosiruptor kronotskyensis 2002]
gi|312203202|gb|ADQ46529.1| Polyprenyl synthetase [Caldicellulosiruptor kronotskyensis 2002]
Length = 299
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/295 (39%), Positives = 186/295 (63%), Gaps = 7/295 (2%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
EEY+ +++ + L++ + + P I++AMRYS+ AGGKR+RPLLC+ S +++ D+
Sbjct: 6 LEEYINLSQKKIEEHLEKILKERSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMLSKDQE 65
Query: 124 W---AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
+ A A+E+IHT SLIHDDLP +DND RR KP +H VFGE+ AILAGDALL+LA
Sbjct: 66 INQKVLDIASAIELIHTYSLIHDDLPAMDNDILRRGKPTNHVVFGEAIAILAGDALLNLA 125
Query: 181 LEHVAVNIAGVSPDR-VVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEY-IHVH 238
E I D+ +V+A + A GVEG++ G+ +DI + G+D+ +EL + +H+
Sbjct: 126 AEVCMDWILRYGCDKNLVKAAKYLFWASGVEGMIGGQVIDITNSGQDIKSEELLFEMHLK 185
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT++L++A+ VCGA++ G V + Y + +GL FQ+ DD+LDV S+++GK+ GK
Sbjct: 186 KTSRLIQASCVCGALVAGAEDDVVFDLEEYGKNLGLAFQIRDDVLDVIGDSKKVGKSIGK 245
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
D+ K T+ G+E A+ +AI+ + ++ S+ L L NY+ +R+
Sbjct: 246 DIKEKKNTFVTFYGLEKAQQLVEHYSQKAIDVIKKYDNSEL--LIELTNYLINRE 298
>gi|357012959|ref|ZP_09077958.1| polyprenyl synthetase [Paenibacillus elgii B69]
Length = 301
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/295 (39%), Positives = 174/295 (58%), Gaps = 4/295 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAV--VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
EY+ A + + L +++ P + ++M YSL+AGGKR+RP+L +A+ E +GG
Sbjct: 7 IREYIRDMASLIERELQQSIPSSWAIPAPLRESMMYSLMAGGKRLRPILVLAAAEALGGS 66
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
A+PAA A+E+IHT SLIHDDLP +DND+ RR KP +H+V+GE+ AILAGDALL+ A
Sbjct: 67 PEAAVPAALAVEIIHTYSLIHDDLPAMDNDDFRRGKPTNHKVYGEAMAILAGDALLTHAF 126
Query: 182 EHV--AVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
V + + DRVV + E+ G G+V G+ D+ E L+ELEYIH+HK
Sbjct: 127 YSVVQSARKHNIPADRVVDIVEELSRLSGAPGMVGGQAADMLGEQGVTKLEELEYIHLHK 186
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T+ L+ ++ G I G ++ + + CIGL FQ+ DD+LD+ +LGK D
Sbjct: 187 TSDLIVFSLKAGGRIAGATEAQLAALERFGTCIGLAFQIQDDVLDLIGDESKLGKPVQSD 246
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K TYP +GIE + S AGEL +A + + + + L LA+Y+ R +
Sbjct: 247 VKQQKVTYPYFIGIEASISKAGELTREAKQAILAADFPRPERLLELADYLMKRDH 301
>gi|302879474|ref|YP_003848038.1| polyprenyl synthetase [Gallionella capsiferriformans ES-2]
gi|302582263|gb|ADL56274.1| Polyprenyl synthetase [Gallionella capsiferriformans ES-2]
Length = 297
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 116/274 (42%), Positives = 171/274 (62%), Gaps = 4/274 (1%)
Query: 83 VVLQP---PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMS 139
V+ QP P ++H+AMRY++L GGKRVRPLL A+ EL G D + A ++E+IH S
Sbjct: 24 VLPQPEVSPQRLHQAMRYAVLEGGKRVRPLLAFAAGELTGADIARVDIVAASVELIHAYS 83
Query: 140 LIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRA 199
L+HDD+P +D+D RR KP H + E+TA+L GD+L +LA + + + P + +
Sbjct: 84 LVHDDMPCMDDDVLRRGKPTCHVQYDEATALLVGDSLQTLAFQLLTEHRLSDGPQQQMAM 143
Query: 200 IAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNA 259
I + SA G G+ G+ +D+ S GK ++L ELE +H+HKT L+ AAV+ GA G +
Sbjct: 144 IRLLASASGSRGMAGGQAIDLDSVGKSLTLPELENMHIHKTGALIRAAVLLGAQCGAVSP 203
Query: 260 IEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSF 319
+++ + +YA+C+GL FQVVDD+LD + LGKTAGKD + K TY L+G+ A+
Sbjct: 204 VQLACLDHYAKCVGLAFQVVDDVLDAEADTATLGKTAGKDADNDKPTYVTLLGVTAAREM 263
Query: 320 AGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
A L +A+E LA F A L LA++I R+
Sbjct: 264 ANNLHREALESLAEF-GDAAQRLRELADFIVLRK 296
>gi|445063263|ref|ZP_21375494.1| geranylgeranyl pyrophosphate synthase [Brachyspira hampsonii 30599]
gi|444505355|gb|ELV05886.1| geranylgeranyl pyrophosphate synthase [Brachyspira hampsonii 30599]
Length = 294
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 119/296 (40%), Positives = 180/296 (60%), Gaps = 9/296 (3%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVKIHKA----MRYSLLAGGKRVRPLLCIASCELVG 119
+EYM + E++NK +D V + +++ + ++Y L AGGKR+RP+L +CE+
Sbjct: 3 LKEYMNVRLEEINKTIDN-VFDKSSIELENSFIEMLKYPLDAGGKRLRPILTCLACEIFE 61
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
GD ++ A ALE+IHT SL+HDDLP +DND+ RR KP +H +GE+ AIL GD LL+
Sbjct: 62 GDYKKSIIPAVALELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDGLLTH 121
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A + ++ A V + + + E+ A G+ G+V G+F+D+ E K+++ L+ +H K
Sbjct: 122 AFQLLSK--ADVKDSTLRKLLFELSYAAGINGMVMGQFIDLYYEEKEINFDMLKILHAKK 179
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T ++ AV GA I N ++E + YA +GL FQ+ DDILDV +E LGKT GKD
Sbjct: 180 TGAMIRGAVRLGA-ISSENDNDIENITKYAEAVGLAFQIQDDILDVISDNETLGKTVGKD 238
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYF-LANYIASRQN 354
GK TY K G+E AK A ++ +AIE L ++ S+A + LANYI R++
Sbjct: 239 EKEGKLTYVKQFGLEGAKKEAKKVTEKAIEYLKPYKDSEAKNILIELANYIIERKS 294
>gi|406911096|gb|EKD50966.1| Polyprenyl synthetase [uncultured bacterium]
Length = 297
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 123/297 (41%), Positives = 176/297 (59%), Gaps = 6/297 (2%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQP---PVKIHKAMRYSLLAGGKRVRPLLCIASCELV 118
F ++Y +K ++ AL + P ++ AM YSL A GKR+RP+L AS + +
Sbjct: 3 FDLKDYFTQKKTVIDTALKAHWINDHHIRPKELLDAMEYSLFAPGKRIRPVLVFASTQTL 62
Query: 119 GGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLS 178
E +P A ALEMIH SLIHDDLP +DND+ RR +P +H+VFGE+ AILAGDALLS
Sbjct: 63 NMPEEDVIPLAGALEMIHAFSLIHDDLPSMDNDDLRRGRPTNHKVFGEALAILAGDALLS 122
Query: 179 LALEHVA-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHV 237
A ++ ++ + ++ I A G G+++G+ D+ SE + +SL EL+ +H
Sbjct: 123 HAFTVLSDLDTEKYPHENIIDVIHHFAKATGTCGMISGQVWDMQSENRIISLDELQNLHR 182
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
HKT L+ AV AV+ G ++ + Y+ IGL FQVVDDILD+ + E LGK G
Sbjct: 183 HKTGALITLAVTSPAVLKGAEPDVMDCLIRYSEAIGLCFQVVDDILDI-EGDESLGKPIG 241
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
D A K+TYP L+G++ AK A LL A+ L F+ +A PL +A +IA R+N
Sbjct: 242 SDQAKNKSTYPALLGLDGAKKEAKRLLEVALASLTSFD-ERADPLRAIARFIAERRN 297
>gi|333985123|ref|YP_004514333.1| geranyltranstransferase [Methylomonas methanica MC09]
gi|333809164|gb|AEG01834.1| Geranyltranstransferase [Methylomonas methanica MC09]
Length = 297
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 130/296 (43%), Positives = 178/296 (60%), Gaps = 7/296 (2%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
+ Y+ +V +ALD + + P +H+AMRY++L GGKR RPLL A+ + +G +
Sbjct: 4 LKAYLTACQNRVERALDARLPGENILPQTLHQAMRYTVLDGGKRTRPLLVYATGQALGLN 63
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
E ACA+E IH SLIHDDLP +DND+ RR KP H+ F E+TAILAGDAL +LA
Sbjct: 64 EDVLDGPACAVEFIHVYSLIHDDLPAMDNDDLRRGKPTCHKAFDEATAILAGDALQALAF 123
Query: 182 EHVAVNIAGVSPDRVVR--AIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
E V N + D R I + A G +G+V G+ +D+AS G ++L ELE +H+HK
Sbjct: 124 E-VLANDPSILVDAGARLKMIGNLTKASGSQGMVGGQAIDLASVGTQLNLPELENMHIHK 182
Query: 240 TAKLLEAAVVCGAVIGGG-NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
T L+ A+V A+ + + + +YA+CIGL FQV DDILDV + LGKT GK
Sbjct: 183 TGALIRASVNMAALSKPDLDPAVAKNLDHYAKCIGLSFQVKDDILDVESDTATLGKTQGK 242
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
D+ + K TYP L+G+ AK A EL QA+ LA F S+A L L+ YI R +
Sbjct: 243 DVDNDKPTYPALLGMAGAKEKARELHEQAVASLAGF-GSEADLLRELSLYIIERTH 297
>gi|379011176|ref|YP_005268988.1| geranyltranstransferase CrtE [Acetobacterium woodii DSM 1030]
gi|375301965|gb|AFA48099.1| geranyltranstransferase CrtE [Acetobacterium woodii DSM 1030]
Length = 298
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 125/295 (42%), Positives = 172/295 (58%), Gaps = 6/295 (2%)
Query: 64 FEEYMIRKAEQVNKALDEAVV--LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F+ + K +N L+ A L P I +AM+YSL AGGKR+RP+L + +C + GD
Sbjct: 4 FKTLLSSKVSAINSDLEMAFEQNLDTPEVIIEAMKYSLFAGGKRLRPILMMETCRALEGD 63
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
P A +EMIHT SLIHDDLP +DND+ RR K +H+V+G++ AILAGD LL+ A
Sbjct: 64 VELIKPLAMGIEMIHTYSLIHDDLPAMDNDDLRRGKATNHKVYGDAMAILAGDGLLNYAA 123
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAM---GVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
E + +S D +V + M S M G+ G++ G+ D+ SE K + L E+ YIH+H
Sbjct: 124 ETMLAGAHNLSGDTLVNYLNAMKSIMGAAGIRGMIGGQVADMLSENKIIDLDEMNYIHLH 183
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KTA LLEA V G +I G R+ +Y+ IGL FQ+VDDILD+ +LGK G
Sbjct: 184 KTAALLEACVQSGCIIAGAEPATQGRLISYSHRIGLAFQIVDDILDIEGDEVDLGKPIGS 243
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
D + K+T+ L G+E +K EL +AIE L + A L LA YI R+
Sbjct: 244 DEKNHKSTFVSLYGLEASKIRVTELETEAIELLKPI-GPRTAFLSQLATYICRRR 297
>gi|152976582|ref|YP_001376099.1| polyprenyl synthetase [Bacillus cytotoxicus NVH 391-98]
gi|152025334|gb|ABS23104.1| Polyprenyl synthetase [Bacillus cytotoxicus NVH 391-98]
Length = 297
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/293 (44%), Positives = 182/293 (62%), Gaps = 3/293 (1%)
Query: 64 FEEYMIRKAEQVNKALDE-AVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
F+ ++I + K L A LQ P + AM YSL AGGKR+RPLL A+ G +
Sbjct: 6 FDAFVIESKMFIEKELARYANELQCPNVLRDAMTYSLEAGGKRLRPLLLFATLHAFGKER 65
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
+ AACALEMIHT SLIHDDLP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A +
Sbjct: 66 ELGIGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQ 125
Query: 183 HV-AVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
V A N G+S + +R E+ A G EG+VAG+ D+ +EGK ++L ELEYIH HKT
Sbjct: 126 VVSAYNYEGISSEIKLRLALELAKAAGPEGMVAGQVADMEAEGKHLTLNELEYIHKHKTG 185
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
+LLE AV+ GA++ G E E++ +A+ +GL FQ+ DDILDV + EE+GK G D +
Sbjct: 186 RLLEFAVLAGAILAGATKEEEEKLLAFAKYVGLAFQIRDDILDVEGTEEEIGKPIGSDAS 245
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K+TY L I+ AKS E + +A + + + L + + IA R N
Sbjct: 246 NEKSTYTTLFAIDEAKSILEETIAKAKDAIMSLQLQD-TYLLSVCDLIAKRNN 297
>gi|226941241|ref|YP_002796315.1| IspA [Laribacter hongkongensis HLHK9]
gi|226716168|gb|ACO75306.1| IspA [Laribacter hongkongensis HLHK9]
Length = 297
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 125/290 (43%), Positives = 170/290 (58%), Gaps = 7/290 (2%)
Query: 69 IRKAEQVNKALDEAVVLQPPVKIH------KAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
+R + + ++ A+ P H AMRY+ L GGKRVRPLL A+ ++ G
Sbjct: 7 LRWMTDIQQHVETALAASLPAGTHAATPLFDAMRYAALDGGKRVRPLLVFAAGDVSGATP 66
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
AACA+E IH SL+HDDLP +D+D RR KP H GE+ A+LAGDAL + A E
Sbjct: 67 EALSAAACAVECIHAYSLVHDDLPCMDDDVLRRGKPTCHIAHGEAMALLAGDALQAHAFE 126
Query: 183 HVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAK 242
+A+ + GV P R + ++ + A G G+ G+ +D+A+ G + LEY+H KT
Sbjct: 127 LLAIPLPGVVPARQLAMVSALAHAAGPRGMCGGQAIDLAAVGHALDQTALEYMHCLKTGA 186
Query: 243 LLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
L++AAV GA+ G + E+ + YAR IGL FQV+DD+LD S LGKTAGKD A
Sbjct: 187 LIQAAVRLGALAGSPDDDELAALDRYARRIGLAFQVIDDVLDCEADSATLGKTAGKDAAH 246
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
K TY LMG+ A+S+A LL A E LA F A +A L LA+YI +R
Sbjct: 247 DKPTYVSLMGLGEARSYAHALLADAHEALALFGA-RARRLQQLADYIVAR 295
>gi|121604406|ref|YP_981735.1| polyprenyl synthetase [Polaromonas naphthalenivorans CJ2]
gi|120593375|gb|ABM36814.1| farnesyl-diphosphate synthase [Polaromonas naphthalenivorans CJ2]
Length = 327
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 123/313 (39%), Positives = 178/313 (56%), Gaps = 14/313 (4%)
Query: 53 ESTDIPLP----TFPFEEYMIRKAEQVNKAL-------DEAVVLQPPVKIHKAMRYSLLA 101
E+TD+ P F + + + +AL DEA P + AMRY++L
Sbjct: 18 ETTDLNAPEKISLFDLRAWSAGQLAAIERALSCWVASPDEAPA---PAGLCDAMRYAVLD 74
Query: 102 GGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASH 161
GGKR+RPLL +A+C V GD + A+ ACA+E+IH SL+HDD+P +DND RR KP H
Sbjct: 75 GGKRLRPLLVMAACAAVNGDAATALRPACAIELIHAYSLVHDDMPCMDNDVLRRGKPTVH 134
Query: 162 EVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIA 221
+GE+ A+LAGDAL +LA E + V R + A G +G+ G+ +D+A
Sbjct: 135 VQYGEAQALLAGDALQALAFELLTPGDDSVDAPTQARLCRLLAQAAGYQGMAGGQAIDLA 194
Query: 222 SEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDD 281
S G ++ +L +H KT LL+A+V+ GA G + + +R+Y IGL FQVVDD
Sbjct: 195 SVGLPLTSAQLHEMHRLKTGALLQASVMMGAACGAASPTALAALRDYGAAIGLAFQVVDD 254
Query: 282 ILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAP 341
ILDVT + LGKTAGKD A K T+ LMG++ ++++A +L QA+ L
Sbjct: 255 ILDVTADAATLGKTAGKDAAQDKPTFVSLMGLQASRAYAQQLHAQALASLRASGLENTQA 314
Query: 342 LYFLANYIASRQN 354
L LA+ + +RQ+
Sbjct: 315 LQALADMLVNRQH 327
>gi|71908673|ref|YP_286260.1| farnesyl-diphosphate synthase [Dechloromonas aromatica RCB]
gi|71848294|gb|AAZ47790.1| farnesyl-diphosphate synthase [Dechloromonas aromatica RCB]
Length = 297
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 128/295 (43%), Positives = 178/295 (60%), Gaps = 7/295 (2%)
Query: 63 PFEEYMIRKAEQVNKALDEAVVLQP---PVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
PF E+M ++ AL + P P ++H+AMRY+ L GGKRVRPLL A+ EL G
Sbjct: 5 PFAEWMAVTQDRAESALGR-FLPGPDCIPARLHEAMRYATLGGGKRVRPLLAHAAGELTG 63
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
CA+EMIH SL+HDDLP +D+D RR +P H F E TA+L GD+L ++
Sbjct: 64 ATPEALDIVGCAVEMIHAYSLVHDDLPCMDDDVLRRGRPTCHVEFDEPTALLVGDSLQTM 123
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A E +A G P + + IA + A G G+ G+ +D+AS GK ++ ELE +H K
Sbjct: 124 AFELLASQPLG-EPKQQLEIIALLAHASGSRGMAGGQAIDLASVGKPLTQPELELMHALK 182
Query: 240 TAKLLEAAVVCGAVIGGG-NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
T L+ AAV+ GA+ G +A E + +A+ GLLFQVVDDILD T S+ LGKTAGK
Sbjct: 183 TGALIRAAVLLGALAGQPLSADERTSLDRFAKRAGLLFQVVDDILDCTASTATLGKTAGK 242
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
D A+ K TY L+G++ A+++A EL A + L+ F +A+ L LA++I RQ
Sbjct: 243 DEAADKPTYVALLGLDAARTYADELRADARDALSIF-GERASRLNQLADFICHRQ 296
>gi|82701369|ref|YP_410935.1| polyprenyl synthetase [Nitrosospira multiformis ATCC 25196]
gi|82409434|gb|ABB73543.1| farnesyl-diphosphate synthase [Nitrosospira multiformis ATCC 25196]
Length = 297
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 116/267 (43%), Positives = 168/267 (62%), Gaps = 2/267 (0%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPF 147
P ++H+AMRY++L GGKRVRPLL A+ EL +E AA A+E+IH SL+HDDLP
Sbjct: 31 PERLHEAMRYTVLGGGKRVRPLLAFAAGELNKANEERVTIAAIAVELIHVYSLVHDDLPC 90
Query: 148 LDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAM 207
+D+D RR KP H +GE+ A+L GD+L SLA + +A +P + I + A
Sbjct: 91 MDDDVLRRGKPTCHIEYGEAIALLTGDSLQSLAFQLLAEYSLADTPKMQLEMIRRLAQAA 150
Query: 208 GVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGG-NAIEVERVR 266
G G+ G+ VD+AS G+ +SL ELE++H+HKT L+ AAV+ GA G + ++ +
Sbjct: 151 GSRGMAGGQAVDLASVGRTLSLPELEFMHIHKTGALIRAAVMLGAYCGSRLDEAQLAALD 210
Query: 267 NYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQ 326
++A+CIGL FQVVDD+LD ++ LGKTAGKD + K TY ++G + A+ A EL +
Sbjct: 211 HFAKCIGLAFQVVDDVLDAEATTAALGKTAGKDAENNKPTYVSILGSKRARELAEELRRE 270
Query: 327 AIEELAYFEASKAAPLYFLANYIASRQ 353
A L FEA+ A L + ++I R+
Sbjct: 271 AYASLEMFEAA-AGRLRQVTDFIIHRE 296
>gi|301063042|ref|ZP_07203607.1| putative geranyltranstransferase [delta proteobacterium NaphS2]
gi|300442923|gb|EFK07123.1| putative geranyltranstransferase [delta proteobacterium NaphS2]
Length = 302
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 128/297 (43%), Positives = 179/297 (60%), Gaps = 5/297 (1%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVK--IHKAMRYSLLAGGKRVRPLLCIASCELVG 119
F + Y+ K QV+ ALDE + + KAMRYSL AGGKR+RP+LCIA E VG
Sbjct: 7 FDLKVYLEEKRVQVDAALDEYFPKGDGLTTALIKAMRYSLFAGGKRLRPILCIAGAEAVG 66
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
G +P ACA+E+IHT SLIHDDLP +D+D+ RR KP +H+VFGE+ A+LAGD LL+
Sbjct: 67 GVGQRVLPVACAVELIHTYSLIHDDLPVMDDDDLRRGKPTNHKVFGEAIALLAGDGLLTE 126
Query: 180 ALEHVAVNIA--GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHV 237
A + A + P ++ I + A G EG+V G+ VDI EGK+ + ++++H
Sbjct: 127 AFSLMTSPKATENIEPPGLLEVIQIIAVAAGCEGMVGGQVVDILWEGKNAEFETVKFLHT 186
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
HKT ++ A+V+ GA+ G V+ +Y IGL FQ+ DDILDV SE +GK AG
Sbjct: 187 HKTGAMIRASVMSGAIAAGARESVVQHFSSYGHKIGLAFQISDDILDVEGDSEIMGKMAG 246
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
D GK TYP ++G++ +K L+ A+++L F A PL +A YI R+
Sbjct: 247 ADEGKGKTTYPSVLGMDESKKIQEALVRDAVQDLEVF-GDAAEPLRKIAYYIIERKK 302
>gi|392409860|ref|YP_006446467.1| geranylgeranyl pyrophosphate synthase [Desulfomonile tiedjei DSM
6799]
gi|390622996|gb|AFM24203.1| geranylgeranyl pyrophosphate synthase [Desulfomonile tiedjei DSM
6799]
Length = 299
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 125/297 (42%), Positives = 177/297 (59%), Gaps = 13/297 (4%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQP----PVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
+EYM + + KALD +L P P +H+AMRYS+ AGGKR+RP+L +A+ E+VG
Sbjct: 6 IKEYMEARRDLAEKALD--AMLPPEDNEPAVLHQAMRYSVFAGGKRIRPVLAMAAAEVVG 63
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
G +P A ALE IHT SLIHDDLP +DND+ RR KP H+VFGE+ AILAGDALL+
Sbjct: 64 GSGKQVLPLAVALECIHTYSLIHDDLPAMDNDDLRRGKPTVHKVFGEAVAILAGDALLTY 123
Query: 180 ALEHVAVNIAGVS----PDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYI 235
L +++ VS + ++ AI E+ A G L+AG+ +DI EGKDV +EYI
Sbjct: 124 GLG--VLSLPEVSRTYRAENLLAAIRELALAAGSTRLIAGQVMDILCEGKDVDKHMVEYI 181
Query: 236 HVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKT 295
+KT L+ A++VCGA + G +E + + +G++FQ+ DD+LD+ ++GK
Sbjct: 182 VRNKTGALIRASLVCGATLVDGELERIEVLGKFGDLLGMIFQIRDDLLDIEGDPVKMGKA 241
Query: 296 AGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
KD GKAT P+L+G E + L+ A E+ A PL + +YI R
Sbjct: 242 VQKDGDRGKATLPRLLGAERTEEIMYSLIRNA-EDTIRPLGETANPLVQITHYIGKR 297
>gi|312127936|ref|YP_003992810.1| polyprenyl synthetase [Caldicellulosiruptor hydrothermalis 108]
gi|311777955|gb|ADQ07441.1| Polyprenyl synthetase [Caldicellulosiruptor hydrothermalis 108]
Length = 299
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 117/295 (39%), Positives = 185/295 (62%), Gaps = 7/295 (2%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE- 122
EEY+ ++V + L++ + + P I++AMRYS+ AGGKR+RPLLC+ S ++V D+
Sbjct: 6 LEEYINLSQKKVEEHLEKILKERSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMVSKDQI 65
Query: 123 --SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
+ A A+E+IHT SLIHDDLP +DND RR KP +H VFGE+ AILAGDALL+LA
Sbjct: 66 VDEKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILAGDALLNLA 125
Query: 181 LEHVAVNIAGVS-PDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEY-IHVH 238
E I + +++A + A GVEG++ G+ +DI + G+D+ +EL + +H+
Sbjct: 126 AEVCMDWILRYGCRENLIKAAKYLFWASGVEGMIGGQVIDITNSGQDIKSEELLFEMHLK 185
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT++L++A+ VCGA++ G V + Y + +GL FQ+ DD+LDV S+++GK+ GK
Sbjct: 186 KTSRLIQASCVCGALVAGAEDDVVSDLEEYGKNLGLAFQIRDDVLDVIGDSKKVGKSIGK 245
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
D+ K T+ G+E A+ +AI+ + ++ S+ L L NY+ +R+
Sbjct: 246 DIKEKKNTFVTFYGLEKAQQLVEHYSQKAIDVIKKYDNSEL--LIELTNYLINRE 298
>gi|302389865|ref|YP_003825686.1| farnesyl-diphosphate synthase [Thermosediminibacter oceani DSM
16646]
gi|302200493|gb|ADL08063.1| farnesyl-diphosphate synthase [Thermosediminibacter oceani DSM
16646]
Length = 296
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 117/296 (39%), Positives = 177/296 (59%), Gaps = 10/296 (3%)
Query: 64 FEEYMIRKAEQVNKALDEAV--VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
FE + + + KALD + + P KIH+AMRYS GGKR+RP+L + + EL G
Sbjct: 4 FEIELKEAGKIIEKALDFYIPKSNEYPQKIHEAMRYSTFNGGKRIRPVLTMKAAELFGLQ 63
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
+P AC +EMIHT SLIHDDLP +DND+ RR KP H+VFG++ A+LAGDALL+LA
Sbjct: 64 GEKVIPTACGIEMIHTYSLIHDDLPIMDNDDFRRGKPTCHKVFGDAIALLAGDALLTLAF 123
Query: 182 EHVAVN--IAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
+ N I G+S V+ I + A G G++ G+ VDI S+G + K L Y+ HK
Sbjct: 124 NTIVKNAQIEGISMQAVIDVIGRISRASGSLGMIGGQTVDILSQGVSIDEKTLFYMDYHK 183
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T L++A++ GA + A ++ ++ + IGL+FQ+VDD+LD+ ++LGK G D
Sbjct: 184 TGCLIQASLWAGARLAEAPASDLNKLDIFGEKIGLIFQIVDDLLDICGDEKKLGKPVGSD 243
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYF--LANYIASRQ 353
+ + K+T+P + G EN+ +L +A E + F+ + +F L +++ RQ
Sbjct: 244 VRNKKSTFPSVYGYENSVKLIKDLSEEAKEIILEFKNGE----FFVQLVDFLVERQ 295
>gi|384208042|ref|YP_005593762.1| geranylgeranyl pyrophosphate synthase [Brachyspira intermedia
PWS/A]
gi|343385692|gb|AEM21182.1| geranylgeranyl pyrophosphate synthase [Brachyspira intermedia
PWS/A]
Length = 294
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 117/295 (39%), Positives = 178/295 (60%), Gaps = 9/295 (3%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVKIHKA----MRYSLLAGGKRVRPLLCIASCELVG 119
+EYM + E++NK +D V + +++ + ++Y L AGGKR+RP+L +CEL
Sbjct: 3 LKEYMNIRLEEINKTIDN-VFDKSSIELENSFIEMLKYPLDAGGKRLRPILTCLACELFN 61
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
GD ++ A ALE+IHT SL+HDDLP +DND+ RR KP +H +GE+ AIL GD LL+
Sbjct: 62 GDYKKSIIPAVALELIHTYSLVHDDLPAMDNDDLRRGKPTTHIKYGEANAILVGDGLLTH 121
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A + ++ V + + + E+ A G+ G+V G+F+D+ E K+++ L+ +H K
Sbjct: 122 AFQLLSK--TDVKDSTLRKLLFELSYAAGINGMVMGQFIDLYYEEKEINFDMLKILHAKK 179
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T ++ A+ GA I N ++E + Y IGL FQ+ DDILDV +E LGKT GKD
Sbjct: 180 TGAMIRGAIRLGA-IASENDNDIENITKYGEAIGLAFQIQDDILDVISDNETLGKTVGKD 238
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYF-LANYIASRQ 353
GK TY K G+E AK A +++ ++IE L ++ S+A + LANYI R+
Sbjct: 239 EKEGKLTYVKQFGLEGAKEEAKKVIEKSIEYLKPYKDSEAKNILIELANYIIERK 293
>gi|312793194|ref|YP_004026117.1| polyprenyl synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312180334|gb|ADQ40504.1| Polyprenyl synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 299
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 117/296 (39%), Positives = 186/296 (62%), Gaps = 7/296 (2%)
Query: 63 PFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
EEY+ ++V + L++ + + P I++AMRYS+ AGGKR+RPLLC+ S +++ D+
Sbjct: 5 KLEEYINLSQKKVEEHLEKILAERSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMLSKDQ 64
Query: 123 ---SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
+ A A+E+IHT SLIHDDLP +DND RR KP +H VFGE+ AILAGDALL+L
Sbjct: 65 EVDQKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILAGDALLNL 124
Query: 180 ALEHVAVNIAGVSPDR-VVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEY-IHV 237
A E I ++ +V+A + A GVEG++ G+ +DI + G+D+ +EL + +H+
Sbjct: 125 AAEVCMDWILRYGCEKNLVKAAKYLFWASGVEGMIGGQVIDITNSGQDIKSEELLFEMHL 184
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
KT++L++A+ VCGA++ G V + + + +GL FQ+ DDILDV S+++GK+ G
Sbjct: 185 KKTSRLIQASCVCGALVAGAEDDVVYDMEEFGKNLGLAFQIRDDILDVIGDSKKVGKSIG 244
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
KD+ K T+ G+E A+ +AI+ + ++ S+ L L NY+ +R+
Sbjct: 245 KDIKEKKNTFVTFYGLEKAQQLVEHYSQKAIDVIQKYDNSEL--LIELTNYLINRE 298
>gi|387929669|ref|ZP_10132346.1| farnesyl diphosphate synthase [Bacillus methanolicus PB1]
gi|387586487|gb|EIJ78811.1| farnesyl diphosphate synthase [Bacillus methanolicus PB1]
Length = 297
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 110/244 (45%), Positives = 155/244 (63%), Gaps = 1/244 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
L P I ++M YSL AGGKR+RPLL A+ +G D + A A+EMIHT SLIHDD
Sbjct: 28 LNAPSIIKESMLYSLEAGGKRIRPLLLFATLHALGHDSKKGLNTAAAIEMIHTYSLIHDD 87
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAG-VSPDRVVRAIAEM 203
LP +DND+ RR KP +H+VFGE+ A+LAGDALL+ + + ++ + D + I E+
Sbjct: 88 LPSMDNDDFRRGKPTNHKVFGEAFAVLAGDALLTYSFQMISETPEEYAAADTKLNLIREL 147
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+V G+ DI EGK + L +LEYIH HKT KLL +V+ GA++ G N +++
Sbjct: 148 SKAAGAEGMVGGQAADIEGEGKQLDLSQLEYIHHHKTGKLLAYSVLAGAMLAGANDEQMK 207
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
+ +A +GL FQ+ DDILD+ E +GK G D + K+TYP L+ +E AK +
Sbjct: 208 DLSQFAFHLGLAFQIRDDILDLEGQEELIGKPVGSDANNQKSTYPSLLSMEGAKEALTDH 267
Query: 324 LGQA 327
+G+A
Sbjct: 268 IGKA 271
>gi|312143726|ref|YP_003995172.1| polyprenyl synthetase [Halanaerobium hydrogeniformans]
gi|311904377|gb|ADQ14818.1| Polyprenyl synthetase [Halanaerobium hydrogeniformans]
Length = 294
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 126/294 (42%), Positives = 191/294 (64%), Gaps = 6/294 (2%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPV---KIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
F+ + KA ++ +L+E + L+ ++ +AMRY+LL+GGKR+RP+L + + EL+ G
Sbjct: 4 FKAILKSKAAELENSLEELMELKEDELAPELSEAMRYTLLSGGKRIRPILTLLTTELLKG 63
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
D A+ + ALEMIH+ SLIHDDLP +D+D+ RR K +H VFGE+ AILAGDALL+ A
Sbjct: 64 DYQAALKSGSALEMIHSYSLIHDDLPAMDDDQLRRGKKTNHLVFGEAKAILAGDALLTYA 123
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKT 240
E ++ + P + ++ I + S G+ G+V G+ +DI +E K++SL E++ IH KT
Sbjct: 124 FE--ILSELELEPAKKIKIIKLIASNSGMLGMVGGQTLDIDAEKKELSLAEMQKIHAAKT 181
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
L++A+V+ G + E E ++ YA +G+LFQVVDD+LDVT +E+LGK G D
Sbjct: 182 GALIKASVLSGVYCSVYSRTEKEALQKYAENLGVLFQVVDDLLDVTGDTEKLGKKVGSDQ 241
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K+TYPKL+G++ A+ A E +A LA FE +A PL L +Y+ SRQ+
Sbjct: 242 KLDKSTYPKLLGVDGAREAAVEYAKKAKNSLAIFE-EEAEPLIKLVDYVLSRQH 294
>gi|397906448|ref|ZP_10507248.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Caloramator
australicus RC3]
gi|397160405|emb|CCJ34585.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Caloramator
australicus RC3]
Length = 291
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 115/270 (42%), Positives = 169/270 (62%), Gaps = 4/270 (1%)
Query: 62 FPFEEYMIRKAEQVNKALDEAV-VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
F++ + K + +NK L+E + + P I +AM+YSL AGGKR+RP+LCIA CE + G
Sbjct: 1 MDFKKALKDKQQLINKRLEELLSYVDAPQIIIEAMKYSLFAGGKRIRPILCIAVCEALEG 60
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
+ + AC++EMIHT SLIHDDLP +DND+ RR K +H+V+G++ AILAGD LL+ A
Sbjct: 61 NLEDVLDIACSIEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGDAIAILAGDGLLNYA 120
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKT 240
E + I + R V A E+ A G+ G++ G+ +DI + G + L +H KT
Sbjct: 121 FETLLKVIKRKNDKRFVDAAFEIAKASGITGMIGGQVIDITNVGNIIDENLLVSMHERKT 180
Query: 241 AKLLEAAVVCGAVIGGGNAIE-VERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
KL+EA+ GA+I N E +E R Y++ +G+ FQ+VDDILDV ++LGK+ GKD
Sbjct: 181 GKLIEASCNVGAII--ANRYEYLEITREYSKNLGVAFQIVDDILDVIGDEKKLGKSVGKD 238
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIE 329
+ K TY L G+E ++ A E +A+E
Sbjct: 239 AKNNKPTYVTLYGLEKSRELAKEFSLKAVE 268
>gi|291532853|emb|CBL05966.1| farnesyl-diphosphate synthase [Megamonas hypermegale ART12/1]
Length = 292
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 116/292 (39%), Positives = 175/292 (59%), Gaps = 4/292 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVK--IHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
+ YM RK + +N+ L+E + + KAM YSL+AGGKR+RP+L +A+ + +G D
Sbjct: 2 MKSYMQRKMDLINQQLNEIYTENMALNKDLAKAMNYSLMAGGKRLRPILIMAAADALGVD 61
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
+ + ++E IHT SLIHDDLP +DND+ RR K +H+VFGE+ AILAGDALL++A
Sbjct: 62 GEKFLRLSTSIEFIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGEALAILAGDALLTMAF 121
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
E +A + V + ++ I EM A G EG+V G+ +D+ SE K + ++ L+ +H KT
Sbjct: 122 EIIATD-KNVDAETKIKIITEMSKAAGAEGMVGGQVIDMQSENKKIDIQTLKQMHAAKTG 180
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
L AA+ GA++ G + ++ + YAR GL FQ+ DDILDV + +GK G D
Sbjct: 181 ALFCAAIRSGAILAGADEKQLANLTEYARQFGLAFQITDDILDVVGDEKTIGKPVGSDEK 240
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
+ K+TY L + +AK+ A E + +A L F A L L +Y+ +R
Sbjct: 241 NHKSTYVTLGSLGSAKALAQEAVDKAKASLVDF-GENAEFLRALVDYLITRN 291
>gi|344995715|ref|YP_004798058.1| polyprenyl synthetase [Caldicellulosiruptor lactoaceticus 6A]
gi|343963934|gb|AEM73081.1| Polyprenyl synthetase [Caldicellulosiruptor lactoaceticus 6A]
Length = 299
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 116/296 (39%), Positives = 186/296 (62%), Gaps = 7/296 (2%)
Query: 63 PFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
EEY+ ++V + L++ + + P I++AMRYS+ AGGKR+RPLLC+ S +++ D+
Sbjct: 5 KLEEYINLSQKKVEEHLEKILAERSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMLSKDQ 64
Query: 123 ---SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
+ A A+E+IHT SLIHDDLP +DND RR KP +H VFGE+ AILAGDALL+L
Sbjct: 65 EVDQKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILAGDALLNL 124
Query: 180 ALEHVAVNIAGVSPDR-VVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEY-IHV 237
A E I ++ +V+A + + GVEG++ G+ +DI + G+D+ +EL + +H+
Sbjct: 125 AAEVCMDWILRCGCEKNLVKAAKYLFWSSGVEGMIGGQVIDITNSGQDIKSEELLFEMHL 184
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
KT++L++A+ VCGA++ G V + + + +GL FQ+ DDILDV S+++GK+ G
Sbjct: 185 KKTSRLIQASCVCGALVAGAENDVVSDMEEFGKNLGLAFQIRDDILDVIGDSKKVGKSIG 244
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
KD+ K T+ G+E A+ +AI+ + ++ S+ L L NY+ +R+
Sbjct: 245 KDIKEKKNTFVTFYGLEKAQQLVEHYSQKAIDVIQKYDNSEL--LIELTNYLINRE 298
>gi|171060046|ref|YP_001792395.1| polyprenyl synthetase [Leptothrix cholodnii SP-6]
gi|170777491|gb|ACB35630.1| Polyprenyl synthetase [Leptothrix cholodnii SP-6]
Length = 298
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 124/294 (42%), Positives = 170/294 (57%), Gaps = 2/294 (0%)
Query: 63 PFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
PF+++M +QV LD V P ++ AMRY +L GGKR+RPLL +A+ V G
Sbjct: 5 PFDDWMRTALDQVEIELDRQVPADAPAELGLAMRYGVLDGGKRLRPLLVLAAAGCVDGHP 64
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
A+ AACA+E+IH SLIHDD+P +DND RR KP H +GE+ A+LAGDA+ +LA E
Sbjct: 65 EAALRAACAVELIHAYSLIHDDMPCMDNDVLRRGKPTVHVQYGEARAMLAGDAMQALAFE 124
Query: 183 HVAVNIA--GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKT 240
+ GV P R + + A GV G+ G+ +D+A GK + L+ +H KT
Sbjct: 125 VLTPEDTDDGVPPALQARLCSLLARASGVLGMAGGQAIDLAHVGKQMDEAALQDMHGRKT 184
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
LL+A+V+ GA G + + + +Y IGL FQVVDDILDVT+ +E LGKTAGKD
Sbjct: 185 GALLQASVLMGAACGRTTPAQWQALADYGWAIGLAFQVVDDILDVTQCAETLGKTAGKDA 244
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TY L+G+E A+ A L QA L + A L LA+ + R +
Sbjct: 245 DQNKPTYVSLLGLEGARERAQSLHAQAHAALERGAFADARWLATLADRVVERDS 298
>gi|254442247|ref|ZP_05055723.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium
DG1235]
gi|198256555|gb|EDY80863.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium
DG1235]
Length = 292
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 121/293 (41%), Positives = 179/293 (61%), Gaps = 5/293 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F+E + ++ A+D+ + + P +IH+AM YS+ AGGKR+RP+L +AS EL
Sbjct: 3 FKEKLRTYQSEIESAVDQYLPAEATRPSRIHEAMLYSMRAGGKRLRPVLVLASKELFDS- 61
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
E AMPAA A+E +HT SLIHDDLP +D+ + RR KP SH+ F E+TA+LAGDALL+ A
Sbjct: 62 ELDAMPAAIAVECLHTYSLIHDDLPSIDDGDLRRGKPTSHKQFDEATAVLAGDALLAYAF 121
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
+ +A + A +PD + E+ G E L+ G+ DI EG +S L +IH++KT+
Sbjct: 122 QLLARHFAN-APDVCANLVGELGETAGSERLIGGQMEDILGEGGPLSEDTLNFIHLNKTS 180
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
L+E +V G +IGG N +++ +R Y R IG+ FQ++DDILD T +GK+ G D
Sbjct: 181 ALIECCLVMGGIIGGANYEQIDALRTYGREIGIAFQIIDDILDATSDETTMGKSIGSDAE 240
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TY KL G+E ++ A + +AI+ + S A L LA ++ +R N
Sbjct: 241 LDKTTYVKLHGLEKSRELAAQRTQKAIQICSAL-PSGAPFLAGLATHLENRLN 292
>gi|253576322|ref|ZP_04853652.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251844215|gb|EES72233.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 302
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 118/274 (43%), Positives = 159/274 (58%), Gaps = 4/274 (1%)
Query: 62 FPFEEYMIRKAEQVNKALDEAV--VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
E YM AE V+ L ++ Q P + +AM YSL+AGGKR+RPLL +A+ E +G
Sbjct: 6 LSIEAYMKEIAEAVSTRLSSSLPAAWQVPETLSRAMDYSLMAGGKRLRPLLVVAAAEALG 65
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
G AMP ACA+EM+HT SLIHDDLP LDND+ RR KP +H+VFGE+ AILAGD LL+
Sbjct: 66 GSRDAAMPVACAVEMVHTYSLIHDDLPALDNDDFRRGKPTNHKVFGEAMAILAGDGLLTH 125
Query: 180 ALEHV--AVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHV 237
A V A GV + + + E+ G G+V G+ D+ E L +L YIH
Sbjct: 126 AFYSVVQASRKQGVPAEASLAIVEELSRFAGPGGMVGGQVADMQGEQGVTDLDQLRYIHE 185
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
HKT L+ +V G I GNA ++E + Y R +G FQ+ DDILD+ +LGK
Sbjct: 186 HKTGDLIVFSVRAGGHIASGNAEQLEALERYGRALGHAFQIQDDILDLIGDESKLGKKTQ 245
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEEL 331
D+ K TYP +GIE +++ L +A + L
Sbjct: 246 SDVIQQKVTYPYFIGIEASRAEVERLTSEAKQAL 279
>gi|222528996|ref|YP_002572878.1| polyprenyl synthetase [Caldicellulosiruptor bescii DSM 6725]
gi|222455843|gb|ACM60105.1| Polyprenyl synthetase [Caldicellulosiruptor bescii DSM 6725]
Length = 299
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 117/296 (39%), Positives = 184/296 (62%), Gaps = 7/296 (2%)
Query: 63 PFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
EEY+ ++V + L++ + + P I++AMRYS+ AGGKR+RPLLC+ S ++V D+
Sbjct: 5 KLEEYIYLSQKKVEENLEKILKERSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMVSKDQ 64
Query: 123 ---SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
+ A A+E+IHT SLIHDDLP +DND RR KP +H VFGE+ AILAGDALL+L
Sbjct: 65 IVDEKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILAGDALLNL 124
Query: 180 ALEHVAVNIAGVSPDR-VVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEY-IHV 237
A E I D+ +V+A + A GVEG++ G+ +DI + G+D+ +EL + +H+
Sbjct: 125 AAEVCMDWILRYGCDKNLVKAAKYLFWASGVEGMIGGQVIDITNSGQDIKSEELLFEMHL 184
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
KT++L++A+ VCGA++ V + Y + +GL FQ+ DD+LDV S+++GK+ G
Sbjct: 185 KKTSRLIQASCVCGALVAAAEDDVVSDLEEYGKNLGLAFQIRDDVLDVIGDSKKVGKSIG 244
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
KD+ K T+ G+ A+ +AI+ + ++ S+ L L NY+ +R+
Sbjct: 245 KDIKEKKNTFVTFYGLGKAQQLVEHYSKKAIDVIKKYDNSEL--LIELTNYLINRE 298
>gi|374603540|ref|ZP_09676518.1| polyprenyl synthetase [Paenibacillus dendritiformis C454]
gi|374390842|gb|EHQ62186.1| polyprenyl synthetase [Paenibacillus dendritiformis C454]
Length = 304
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 120/294 (40%), Positives = 171/294 (58%), Gaps = 4/294 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAVV--LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F Y+ R ++ + L Q P ++ ++M YSL+AGGKR+RPL + +CE + G
Sbjct: 10 FASYLERHVARIERLLPAQFPAGWQVPAELKESMLYSLMAGGKRLRPLCVVIACESLNGP 69
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
A P ACA+EMIHT SL+HDDLP +DND+ RR KP +H+VFGE+ AILAGDALL+ A
Sbjct: 70 LEAADPVACAIEMIHTYSLVHDDLPAMDNDDYRRGKPTNHKVFGEALAILAGDALLTHAF 129
Query: 182 EHVA--VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
VA G+S + + E+ G+ G+V G+ D+ E +L +LEYIH+HK
Sbjct: 130 YTVAQCARRHGISAEIALTITEELSVYAGMRGMVGGQTADMLGEQGLTTLDQLEYIHLHK 189
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T+ L+ A+ GA + G N ++ + + +GL FQ+ DDILD+T LGK G D
Sbjct: 190 TSDLIVFALRAGAHLAGANEAQLNALTEFGTKLGLAFQIQDDILDITGEEGLLGKPKGSD 249
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
SGK TYP +G+E +K L +A + + A LY LA+Y+ RQ
Sbjct: 250 EKSGKVTYPYFIGLEASKQEVVRLTEEAKQAVREAGFPYPARLYELADYLLERQ 303
>gi|197284007|ref|YP_002149879.1| geranyltranstransferase [Proteus mirabilis HI4320]
gi|227358123|ref|ZP_03842464.1| geranyltranstransferase [Proteus mirabilis ATCC 29906]
gi|425066900|ref|ZP_18470016.1| hypothetical protein HMPREF1311_00031 [Proteus mirabilis WGLW6]
gi|194681494|emb|CAR40356.1| geranyltranstransferase [Proteus mirabilis HI4320]
gi|227161459|gb|EEI46496.1| geranyltranstransferase [Proteus mirabilis ATCC 29906]
gi|404601571|gb|EKB01963.1| hypothetical protein HMPREF1311_00031 [Proteus mirabilis WGLW6]
Length = 307
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 130/306 (42%), Positives = 183/306 (59%), Gaps = 6/306 (1%)
Query: 55 TDIPLPTFPFEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCI 112
++ L T F + + ++V++AL++A+ P + + +AMRY L GGKR+RP L
Sbjct: 2 SNATLCTDAFRQKLHSAHQRVDEALNQALQTLPFSDMPLSQAMRYGALLGGKRLRPFLVY 61
Query: 113 ASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILA 172
A E+ + A A+E IH SLIHDDLP +DND+ RR KP H FGE+ AILA
Sbjct: 62 AVGEMFNVPVANLDVPAAAIECIHAYSLIHDDLPAMDNDDLRRGKPTCHIEFGEANAILA 121
Query: 173 GDALLSLALEHVAVN-IAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKE 231
GDAL +LA E +A N + V+ V IAE+ +A G+ G+ G+ +D+ +E K + L
Sbjct: 122 GDALQTLAFEILAKNAMPDVAIADRVAMIAELATASGLAGMCGGQALDLDAEDKSIDLVA 181
Query: 232 LEYIHVHKTAKLLEAAVVCGAVIGGGNAIEV-ERVRNYARCIGLLFQVVDDILDVTKSSE 290
LE IH+HKT L+ AAV GA+ G +V + YA IGL FQV DDILDV S+E
Sbjct: 182 LEKIHLHKTGALIRAAVRLGALSAGQKGHDVLPALDKYAHSIGLAFQVQDDILDVIGSTE 241
Query: 291 ELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASK--AAPLYFLANY 348
E GK G D +GK+TYP L+G+ A+ A EL +A++ LA+ E + + L LAN+
Sbjct: 242 ETGKRQGSDQEAGKSTYPALLGLAQAQKKAQELYNEALDALAFLEQYEYDTSTLKQLANF 301
Query: 349 IASRQN 354
I R+N
Sbjct: 302 IVERKN 307
>gi|225620225|ref|YP_002721482.1| geranylgeranyl pyrophosphate synthase [Brachyspira hyodysenteriae
WA1]
gi|225215044|gb|ACN83778.1| geranylgeranyl pyrophosphate synthase [Brachyspira hyodysenteriae
WA1]
Length = 296
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 116/296 (39%), Positives = 178/296 (60%), Gaps = 9/296 (3%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVKIHKA----MRYSLLAGGKRVRPLLCIASCELVG 119
+EYM + E++NK +D V + +++ + ++Y L AGGKR+RP+L +CEL
Sbjct: 3 LKEYMNIRLEEINKTIDN-VFDKSDIELENSFIEMLKYPLDAGGKRLRPILTCLACELFN 61
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
GD ++ A ALE+IHT SL+HDDLP +DND+ RR KP +H +GE+ AIL GD LL+
Sbjct: 62 GDYKKSIIPAVALELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDGLLTH 121
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A + ++ V + + + E+ A G+ G+V G+F+D+ E K+++ L+ +H K
Sbjct: 122 AFQLLSK--TDVKDSTLRKLLFELSYAAGINGMVMGQFIDLYYEEKEINFDMLKILHAKK 179
Query: 240 TAKLLEAAVVCGAVIGGG-NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
T ++ A+ GA+ N ++E + Y IGL FQ+ DDILDV +E LGKT GK
Sbjct: 180 TGAMIRGAIRLGAISSENINDNDIENITKYGEAIGLAFQIQDDILDVISDNETLGKTVGK 239
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYF-LANYIASRQ 353
D GK TY K G+E AK A +++ ++IE L ++ S+A + LANYI R+
Sbjct: 240 DEKEGKLTYVKQFGLEGAKEEAKKVIEKSIEYLKPYKESEAKNILIELANYIIERK 295
>gi|312134820|ref|YP_004002158.1| polyprenyl synthetase [Caldicellulosiruptor owensensis OL]
gi|311774871|gb|ADQ04358.1| Polyprenyl synthetase [Caldicellulosiruptor owensensis OL]
Length = 299
Score = 214 bits (544), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 117/296 (39%), Positives = 184/296 (62%), Gaps = 7/296 (2%)
Query: 63 PFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD- 121
EEY+ ++V K LD + + P I++AMRYS+ AGGKR+RPLLC+ S ++ D
Sbjct: 5 KLEEYINLSQKKVEKHLDGILKERSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMFSEDK 64
Query: 122 --ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
+ + A A+E+IHT SLIHDDLP +DND RR KP +H +FGE+ AILAGDALL+L
Sbjct: 65 EIDQKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVMFGEAIAILAGDALLNL 124
Query: 180 ALEHVAVNIAGVS-PDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEY-IHV 237
A E I + +++A + A GVEG++ G+ +DI + G+D+ +EL + +H+
Sbjct: 125 AAEVCMDWILRYGCRENLIKAAKYLFWASGVEGMIGGQVIDITNSGQDIKNEELLFEMHL 184
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
KT++L++A+ VCGA++ G V + Y + +GL FQ+ DD+LDV S+++GK+ G
Sbjct: 185 KKTSRLIQASCVCGALVAGAEDRVVFDLEEYGKNLGLAFQIRDDVLDVIGDSKKVGKSIG 244
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
KD+ K+T+ G+E A+ +AI+ + ++ S+ L L NY+ +R+
Sbjct: 245 KDIKEKKSTFVTFYGLEKAQQLVEHYSQKAIDVIKKYDNSEL--LIELTNYLINRE 298
>gi|390952210|ref|YP_006415969.1| geranylgeranyl pyrophosphate synthase [Thiocystis violascens DSM
198]
gi|390428779|gb|AFL75844.1| geranylgeranyl pyrophosphate synthase [Thiocystis violascens DSM
198]
Length = 297
Score = 214 bits (544), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 123/294 (41%), Positives = 186/294 (63%), Gaps = 5/294 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAV--VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
+ Y + E++ +ALDE + PP+++H+AMRYS+L GGKR+RPLL A+ E +G D
Sbjct: 6 LDTYRTQCQERLERALDELLPRASVPPLRLHEAMRYSVLGGGKRIRPLLTYATGEALGID 65
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
+ ACA+E IH SLIHDDLP +D+D+ RR +P H F ++TAILAGDAL +LA
Sbjct: 66 SALLDRPACAVEFIHAYSLIHDDLPAMDDDDLRRGRPTCHRAFDDATAILAGDALQTLAF 125
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
+ +A G+ + + + A G G+V G+ +D+ +EGK + + LE+IH+HKT
Sbjct: 126 QSLA-EATGLDARIRIAMVEHLARASGSRGMVGGQALDLDAEGKALDVAMLEHIHIHKTG 184
Query: 242 KLLEAAVVCGAVIGGG-NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
L+ A+V G + G +A ER+ YA+C+GL FQ+ DD+LDV + ++GKTAG+D
Sbjct: 185 ALIRASVQMGILAHGALDADRAERLDRYAKCLGLAFQIQDDVLDVEGDTAQIGKTAGRDQ 244
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A KATYP L+G+ AK A +L+ +A+ + F A PL ++A+ + R+N
Sbjct: 245 ALDKATYPALVGLAEAKEMAADLIAEALTAIEIFP-DGADPLRWIASALLGRKN 297
>gi|332799347|ref|YP_004460846.1| polyprenyl synthetase [Tepidanaerobacter acetatoxydans Re1]
gi|332697082|gb|AEE91539.1| Polyprenyl synthetase [Tepidanaerobacter acetatoxydans Re1]
Length = 296
Score = 214 bits (544), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 109/270 (40%), Positives = 165/270 (61%), Gaps = 8/270 (2%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPF 147
P K+H+AM YS L+GGKR+RP++ + + EL G +P AC +EMIHT SLIHDDLP
Sbjct: 30 PSKLHEAMHYSTLSGGKRLRPIIVMKAAELFGISYEKVIPTACGIEMIHTYSLIHDDLPV 89
Query: 148 LDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVN--IAGVSPDRVVRAIAEMCS 205
+DND+ RR KP H+++G++ A+LAGDALL+ A +A N I+G++PD VV I ++
Sbjct: 90 MDNDDFRRGKPTCHKIYGDAVALLAGDALLTHAFATIAKNSKISGINPDAVVDVIEKVSL 149
Query: 206 AMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERV 265
A G G++ G+ VDI + GKDVS L YI HKT L+ + GA + G + ++E +
Sbjct: 150 AAGGYGMIGGQTVDIITSGKDVSRDTLFYISTHKTGCLMSVSFWSGARLAGASKEDLETI 209
Query: 266 RNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLG 325
+ + +GL+FQ+VDDILD+ S LGK G D+ + K T+ L G + L
Sbjct: 210 KCFGEKLGLIFQIVDDILDIKGSEAVLGKPVGSDMKNKKNTFVNLFGFNKSVEIVNNLSL 269
Query: 326 QAIEELAYFEASKAAPLYF--LANYIASRQ 353
+A + ++ + + +F L ++I+ R
Sbjct: 270 EAKQLISNYNNND----FFIQLTDFISKRD 295
>gi|339484559|ref|YP_004696345.1| Polyprenyl synthetase [Nitrosomonas sp. Is79A3]
gi|338806704|gb|AEJ02946.1| Polyprenyl synthetase [Nitrosomonas sp. Is79A3]
Length = 297
Score = 214 bits (544), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 116/267 (43%), Positives = 163/267 (61%), Gaps = 2/267 (0%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPF 147
P ++HKAMRYS+L GGKRVRPLL A+ EL D M A A+E+IH SL+HDDLP
Sbjct: 31 PERLHKAMRYSVLGGGKRVRPLLSFAAGELALADTDRVMVVAAAVELIHAYSLVHDDLPC 90
Query: 148 LDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAM 207
+D+D RR KP H F E+TA+L GD+L +LA E +A P + IA++ A
Sbjct: 91 MDDDILRRGKPTCHIEFDEATALLTGDSLQTLAFELLAEKCLADEPGTQLEMIAQLAVAA 150
Query: 208 GVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGG-NAIEVERVR 266
G G+ G+ D+ S GK +SL ELE++H+HKT L+ AAV+ GA N ++ ++
Sbjct: 151 GSRGMAGGQAFDLDSVGKTLSLPELEFMHIHKTGALIRAAVMLGARCNNRLNNNQLGKLD 210
Query: 267 NYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQ 326
++A+C+GL FQVVDD+LD ++ LGKTAGKD + K TY ++GI A+ A +L
Sbjct: 211 HFAKCVGLAFQVVDDLLDTEATTATLGKTAGKDAENNKPTYVSILGISQARELAEKLQHD 270
Query: 327 AIEELAYFEASKAAPLYFLANYIASRQ 353
A + L F A L + ++I R+
Sbjct: 271 AYQALDSF-GEAALRLRQVTDFIIKRK 296
>gi|438002488|ref|YP_007272231.1| Octaprenyl-diphosphate synthase [Tepidanaerobacter acetatoxydans
Re1]
gi|432179282|emb|CCP26255.1| Octaprenyl-diphosphate synthase [Tepidanaerobacter acetatoxydans
Re1]
Length = 286
Score = 214 bits (544), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 109/270 (40%), Positives = 165/270 (61%), Gaps = 8/270 (2%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPF 147
P K+H+AM YS L+GGKR+RP++ + + EL G +P AC +EMIHT SLIHDDLP
Sbjct: 20 PSKLHEAMHYSTLSGGKRLRPIIVMKAAELFGISYEKVIPTACGIEMIHTYSLIHDDLPV 79
Query: 148 LDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVN--IAGVSPDRVVRAIAEMCS 205
+DND+ RR KP H+++G++ A+LAGDALL+ A +A N I+G++PD VV I ++
Sbjct: 80 MDNDDFRRGKPTCHKIYGDAVALLAGDALLTHAFATIAKNSKISGINPDAVVDVIEKVSL 139
Query: 206 AMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERV 265
A G G++ G+ VDI + GKDVS L YI HKT L+ + GA + G + ++E +
Sbjct: 140 AAGGYGMIGGQTVDIITSGKDVSRDTLFYISTHKTGCLMSVSFWSGARLAGASKEDLETI 199
Query: 266 RNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLG 325
+ + +GL+FQ+VDDILD+ S LGK G D+ + K T+ L G + L
Sbjct: 200 KCFGEKLGLIFQIVDDILDIKGSEAVLGKPVGSDMKNKKNTFVNLFGFNKSVEIVNNLSL 259
Query: 326 QAIEELAYFEASKAAPLYF--LANYIASRQ 353
+A + ++ + + +F L ++I+ R
Sbjct: 260 EAKQLISNYNNND----FFIQLTDFISKRD 285
>gi|315639632|ref|ZP_07894772.1| geranyltranstransferase [Enterococcus italicus DSM 15952]
gi|315484593|gb|EFU75049.1| geranyltranstransferase [Enterococcus italicus DSM 15952]
Length = 289
Score = 214 bits (544), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 160/229 (69%), Gaps = 3/229 (1%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAM-PAACALEMIHTMSLIHDDLPFL 148
++ ++MRYS+ AGGKR+RPLL ++ L + S A+ A A+E++HT SLIHDDLP +
Sbjct: 27 QLAESMRYSVEAGGKRIRPLLLASTYALYQKNVSQAVCQVAAAVELVHTYSLIHDDLPAM 86
Query: 149 DNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMG 208
DND+ RR KP +H+VFGE+ AILAGD LL+LA + + A ++ D+ V + + G
Sbjct: 87 DNDDLRRGKPTNHKVFGEALAILAGDGLLTLAFQ--VLGQAELADDKKVACLTLLAQTAG 144
Query: 209 VEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNY 268
G+VAG+ DI +EGK +SL++L+ IH KT +L+ +V+ G +IGG +A E ++ ++
Sbjct: 145 TLGMVAGQAADIEAEGKQLSLEQLQGIHARKTGELIRFSVIAGGIIGGASAKEQAQLDSF 204
Query: 269 ARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAK 317
AR +GL FQ+ DD+LDV ++EELGKTA +D K+TYP+L+GI+ AK
Sbjct: 205 ARKLGLAFQIKDDLLDVLATTEELGKTAHRDSVLQKSTYPQLLGIQKAK 253
>gi|403384095|ref|ZP_10926152.1| geranyltranstransferase [Kurthia sp. JC30]
Length = 293
Score = 214 bits (544), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 126/289 (43%), Positives = 174/289 (60%), Gaps = 28/289 (9%)
Query: 81 EAVVLQ------PPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEM 134
E V+LQ P + +AM YSL AGGKRVRPL +A E +G D+ A+EM
Sbjct: 16 ETVMLQLVDNITAPAILKEAMAYSLKAGGKRVRPLFVLAVLEHLGADKKAGYTIGSAVEM 75
Query: 135 IHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPD 194
IHT SLIHDDLP +DND+ RR K +H+V+GE+ A LAGDAL +L +A + G+S +
Sbjct: 76 IHTYSLIHDDLPSMDNDDYRRGKLTNHKVYGEAYATLAGDALNTLPFGVIA-RMDGISAE 134
Query: 195 RVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVI 254
+ V I + A G EG+V G+ +DI E + ++L+ELE++HV+KT +L ++ GAV+
Sbjct: 135 QKVTLIDLLSEAAGAEGMVGGQILDIDGETRQLTLEELEHVHVNKTGAILRFSIEAGAVL 194
Query: 255 GGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIE 314
+ R YA IGL FQ+ DDILD+ +SE+LGKTAGKD+AS K+TYP L+ ++
Sbjct: 195 ADADQATRNIFREYAYHIGLAFQIKDDILDIEGTSEQLGKTAGKDVASDKSTYPALLTLD 254
Query: 315 NAKSFAGELLGQAIEELA-YFEASKAA---------PLYFLANYIASRQ 353
AK E+LA ++EA+ AA L LA YI R
Sbjct: 255 GAK-----------EKLATHYEAALAALRQLPSDSTLLEELATYIVKRN 292
>gi|452994013|emb|CCQ94485.1| geranyltranstransferase [Clostridium ultunense Esp]
Length = 296
Score = 214 bits (544), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 115/296 (38%), Positives = 174/296 (58%), Gaps = 10/296 (3%)
Query: 63 PFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
P +EY+ +A + L + P ++ ++M YSL AGGKR RP+L + E +G
Sbjct: 3 PLQEYLEEQASWFTEQLPRFLPRDIPERLLQSMDYSLRAGGKRFRPILLFSVLESIGKSR 62
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
+ A A+EMIHT SLIHDDLP +DND+ RR K +H+VFGE AILAGDALL+ A
Sbjct: 63 ELGLETAVAIEMIHTYSLIHDDLPGMDNDDYRRGKLTNHKVFGEGMAILAGDALLTWAFY 122
Query: 183 HVAV------NIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIH 236
++V ++ + ++R +AE A G G+V G+ +D+ +E K + L ELE IH
Sbjct: 123 LLSVLPDFHPELSHATSLLLIRKLAE---AAGPTGMVGGQALDLEAENKQLPLSELEKIH 179
Query: 237 VHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTA 296
HKT ++ + + GA++GG + E YAR +GL FQ+ DDIL++ ++LGK
Sbjct: 180 THKTGDMIHFSAMAGAILGGATTKQKEAFSTYARKLGLAFQIQDDILNIIGDEQKLGKRV 239
Query: 297 GKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
G D GK+TYP L+G+E + ++ L+ +A + + + K L+ LA+YI R
Sbjct: 240 GSDAQLGKSTYPALLGMEESIAYMNRLVDEAKKAIQ-IDGIKREHLHLLADYIVHR 294
>gi|415885447|ref|ZP_11547375.1| Polyprenyl synthetase [Bacillus methanolicus MGA3]
gi|387591116|gb|EIJ83435.1| Polyprenyl synthetase [Bacillus methanolicus MGA3]
Length = 296
Score = 213 bits (543), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 109/245 (44%), Positives = 155/245 (63%), Gaps = 1/245 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
L+ P I ++M YSL AGGKR+RPLL A+ G D + A A+EMIHT SLIHDD
Sbjct: 27 LEAPSIIKESMLYSLEAGGKRIRPLLLFATLHAFGKDSKKGLHTAAAIEMIHTYSLIHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAG-VSPDRVVRAIAEM 203
LP +DND+ RR KP +H+VFGE+ A+LAGDALL+ + + + + D ++ I E+
Sbjct: 87 LPSMDNDDFRRGKPTNHKVFGEAFAVLAGDALLTYSFQLICETPEEYAAADIKLKLIREL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+V G+ DI EGK + L +LEYIH HKT KLL +V+ GA++ N +++
Sbjct: 147 SKAAGAEGMVGGQVADIEGEGKQLHLTQLEYIHHHKTGKLLAYSVLAGAILARANVEQIK 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
+ +A +GL FQ+ DDILD+ E +GK G D + K+TYP ++ +E AK E
Sbjct: 207 VLSQFAFHLGLAFQIRDDILDLEGQEELIGKPVGSDTNNHKSTYPSILSMEGAKEALTEH 266
Query: 324 LGQAI 328
+G+A+
Sbjct: 267 IGKAM 271
>gi|83648505|ref|YP_436940.1| geranylgeranyl pyrophosphate synthase [Hahella chejuensis KCTC
2396]
gi|83636548|gb|ABC32515.1| Geranylgeranyl pyrophosphate synthase [Hahella chejuensis KCTC
2396]
Length = 299
Score = 213 bits (543), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 126/297 (42%), Positives = 187/297 (62%), Gaps = 9/297 (3%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVL----QPPVKIHKAMRYSLLAGGKRVRPLLCIASCE 116
T +++ R Q+++AL A +L P ++++AM Y +L GGKRVRPLL +A+ E
Sbjct: 5 TDSLDDFFQRNRAQIDQAL--ANLLPEPEGPKARLNEAMGYCVLNGGKRVRPLLLLATTE 62
Query: 117 LVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDAL 176
+GGD A+PA CA+E+IH SL+HDDLP +D+D RR KP H + E+TAIL GD L
Sbjct: 63 ALGGDLQQALPACCAVELIHAYSLVHDDLPAMDDDSLRRGKPTCHIAYDEATAILVGDGL 122
Query: 177 LSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIH 236
+LA + + +G S + V++ + E+ A G +G+V G+ +DI SEG + L+ELE +H
Sbjct: 123 QTLAFSALTES-SGASAESVLQMVRELARASGHQGMVGGQAIDIYSEGHTLKLEELERMH 181
Query: 237 VHKTAKLLEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKT 295
+ KT L+EA++V GA+ G +A +E +R +AR IGL FQV DDI+DV + LGKT
Sbjct: 182 LEKTGALIEASIVLGALASGRADAECIEGLRRFARAIGLAFQVRDDIIDVESDTSVLGKT 241
Query: 296 AGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
AGKD K TY L+G+E AK A +L +A+ +L + + L LA+++ R
Sbjct: 242 AGKDAERNKPTYTSLLGLEQAKLKALQLHNEALSQLQAL-GLQNSRLQDLASFMIER 297
>gi|442805670|ref|YP_007373819.1| farnesyl diphosphate synthase [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442741520|gb|AGC69209.1| farnesyl diphosphate synthase [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 298
Score = 213 bits (543), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 121/296 (40%), Positives = 183/296 (61%), Gaps = 10/296 (3%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
T ++Y+++ +++N+ + P ++ ++M YS++AGGKR+RP+L +A +++ G
Sbjct: 11 TTLVDDYLVKYFDRLNREV-------PEKRLVESMSYSVMAGGKRIRPVLMLAVTKMLSG 63
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLS-- 178
D MP A A+EMIHT SLIHDDLP +DND+ RR K +H+VFGE+ AILAGDALL+
Sbjct: 64 DPQEVMPFAAAIEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGEAMAILAGDALLNEA 123
Query: 179 LALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
+L A AG + V+A + A G +G++AG+ +D+ SEG VS +L+ +H
Sbjct: 124 FSLLFEASANAGDKMEHWVKASCIIARAAGRDGMIAGQVIDMESEGTQVSATKLKTMHRK 183
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT L+ A+V+ AV G + +++ + YA IG+ FQ+ DDILDV + EELGK G
Sbjct: 184 KTGALITASVIVPAVFLGLSEDKIKALTEYAENIGIAFQIRDDILDVEGTIEELGKPVGS 243
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
D + K TY L G++ AK E+ +A+E L F +A L +A YIA R+N
Sbjct: 244 DERNRKTTYVSLYGLDGAKEMLREVTRKAVESLDVF-GERAWFLKEIAYYIAERRN 298
>gi|423417897|ref|ZP_17394986.1| hypothetical protein IE3_01369 [Bacillus cereus BAG3X2-1]
gi|401107068|gb|EJQ15025.1| hypothetical protein IE3_01369 [Bacillus cereus BAG3X2-1]
Length = 297
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/271 (45%), Positives = 178/271 (65%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR+RPLL A+ + G +++ + AACALEMIHT SLIHDD
Sbjct: 28 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLIHDD 87
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + + A +S ++ VR + E+
Sbjct: 88 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 147
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+VAG+ D+ +EGK +++ ELEYIH HKT KLLE AV+ GA++ + E
Sbjct: 148 AKAAGPEGMVAGQVADMEAEGKRLTINELEYIHKHKTGKLLEFAVLAGAILSDATEEQEE 207
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++ +A+ IGL FQ+ DDILDV + EE+GK G D ++ K+TY L ++ AKS E
Sbjct: 208 KLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEET 267
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A + ++ + + L + + IA R N
Sbjct: 268 IAKAKDSISSLQL-QDEYLLSICDLIAKRNN 297
>gi|289423135|ref|ZP_06424950.1| geranyltranstransferase [Peptostreptococcus anaerobius 653-L]
gi|289156466|gb|EFD05116.1| geranyltranstransferase [Peptostreptococcus anaerobius 653-L]
Length = 295
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/266 (45%), Positives = 170/266 (63%), Gaps = 4/266 (1%)
Query: 91 IHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDN 150
I +AM YSL AGGKR+RP+L + + +L G +P + A+EMIHT SLIHDDLP LDN
Sbjct: 32 IFEAMNYSLRAGGKRLRPILLMEAYKLCQGQGEDFVPYSVAMEMIHTYSLIHDDLPALDN 91
Query: 151 DERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIA--GVSPDRVVRAIAEMCSAMG 208
D+ RR KP +H VFGE+ AILAGDALL+ A E + +N A P+ +RA E+ G
Sbjct: 92 DDLRRGKPTNHIVFGEAMAILAGDALLNTAYETM-LNAAFKHSRPEISLRAAYEISRGAG 150
Query: 209 VEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNY 268
+ G++ G+ VD+ SE K + +L+YIH++KTA ++ +V GA++ G + +E + Y
Sbjct: 151 IYGMIGGQVVDVESEDKKIDKDKLDYIHMNKTAAMIVGSVRAGAILAGIDEDRLESLTKY 210
Query: 269 ARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAI 328
A IGL FQ+VDDILD+ + LGK G DL + K+TYP L+GI+ +K L+ +A
Sbjct: 211 AENIGLAFQIVDDILDIEGDEKLLGKRVGSDLDNDKSTYPSLLGIDASKKIVENLIEEAK 270
Query: 329 EELAYFEASKAAPLYFLANYIASRQN 354
L F AS A + LA++I RQN
Sbjct: 271 TSLEVF-ASDAEFMNALADFIRDRQN 295
>gi|423389504|ref|ZP_17366730.1| hypothetical protein ICG_01352 [Bacillus cereus BAG1X1-3]
gi|401641595|gb|EJS59312.1| hypothetical protein ICG_01352 [Bacillus cereus BAG1X1-3]
Length = 297
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/271 (45%), Positives = 178/271 (65%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR+RPLL A+ + G +++ + AACALEMIHT SLIHDD
Sbjct: 28 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLIHDD 87
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + + A +S ++ VR + E+
Sbjct: 88 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 147
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+VAG+ D+ +EGK +++ ELEYIH HKT KLLE AV+ GA++ + E
Sbjct: 148 AKAAGPEGMVAGQVADMEAEGKRLTINELEYIHKHKTGKLLEFAVLAGAILSDATEEQEE 207
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++ +A+ IGL FQ+ DDILDV + EE+GK G D ++ K+TY L ++ AKS E
Sbjct: 208 KLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEET 267
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A + ++ + + L + + IA R N
Sbjct: 268 IAKAKDSISSLQL-QDEYLLSICDLIAKRNN 297
>gi|217970189|ref|YP_002355423.1| polyprenyl synthetase [Thauera sp. MZ1T]
gi|217507516|gb|ACK54527.1| Polyprenyl synthetase [Thauera sp. MZ1T]
Length = 302
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 132/302 (43%), Positives = 185/302 (61%), Gaps = 6/302 (1%)
Query: 54 STDIPLPTFPFEEYMIRKAEQVNKA--LDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLC 111
+TD LP+F I++ +V A L +A + P ++H+AMRY++L GGKRVRPLL
Sbjct: 2 NTDSKLPSFSEWTAQIQQRTEVALAGVLPDAAI--APHRLHEAMRYAVLGGGKRVRPLLA 59
Query: 112 IASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAIL 171
A+ L G ACA+E+IH SL+HDDLP +D+D RR KP H F E+TA+L
Sbjct: 60 HAAGALAGAAAEDLDRIACAVELIHAYSLVHDDLPCMDDDVLRRGKPTVHVEFDEATALL 119
Query: 172 AGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKE 231
AGDAL +LA + +A G P + + ++ A G G+ G+ +D+AS GK + +E
Sbjct: 120 AGDALQTLAFQVLAERPLGTDPANQLAMLNQLAIASGSRGMAGGQAIDLASVGKRLGREE 179
Query: 232 LEYIHVHKTAKLLEAAVVCGAVIGGG-NAIEVERVRNYARCIGLLFQVVDDILDVTKSSE 290
LE++H+HKT L+ AAV+ GA GG A E R+ +YA+ +GLLFQVVDD+LD +
Sbjct: 180 LEFMHIHKTGALIRAAVLLGARAGGTLGADEHARLDHYAKVVGLLFQVVDDLLDAEADTA 239
Query: 291 ELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIA 350
LGKTAGKD + K TY L+G+ +A+ A E+L +A L F A +A L LA+YI
Sbjct: 240 TLGKTAGKDADNDKPTYVSLLGLVDARRLAEEMLDEARASLRPFGA-RALRLEQLADYIV 298
Query: 351 SR 352
R
Sbjct: 299 HR 300
>gi|423452515|ref|ZP_17429368.1| hypothetical protein IEE_01259 [Bacillus cereus BAG5X1-1]
gi|423470398|ref|ZP_17447142.1| hypothetical protein IEM_01704 [Bacillus cereus BAG6O-2]
gi|401140153|gb|EJQ47710.1| hypothetical protein IEE_01259 [Bacillus cereus BAG5X1-1]
gi|402436527|gb|EJV68557.1| hypothetical protein IEM_01704 [Bacillus cereus BAG6O-2]
Length = 297
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/271 (45%), Positives = 178/271 (65%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR+RPLL A+ + G +++ + AACALEMIHT SLIHDD
Sbjct: 28 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLIHDD 87
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + + A +S ++ VR + E+
Sbjct: 88 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAEKKVRLVLEL 147
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+VAG+ D+ +EGK +++ ELEYIH HKT KLLE AV+ GA++ + E
Sbjct: 148 AKAAGPEGMVAGQVADMEAEGKRLTINELEYIHKHKTGKLLEFAVLAGAILSDATEEQEE 207
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++ +A+ IGL FQ+ DDILDV + EE+GK G D ++ K+TY L ++ AKS E
Sbjct: 208 KLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEET 267
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A + ++ + + L + + IA R N
Sbjct: 268 IAKAKDSISSLQL-QDEYLLSICDLIAKRNN 297
>gi|164605014|dbj|BAF98303.1| geranylgeranyl-diphosphate synthase [Hevea brasiliensis]
Length = 306
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/296 (39%), Positives = 176/296 (59%), Gaps = 14/296 (4%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAG-GKRVRPLLCIASCELVGG 120
F + Y + ++N+ LD+A+ +Q P +I++AMRYS+LA KR P++CIA+CEL GG
Sbjct: 12 FDLKTYWMTLISEINQKLDQAIPIQYPEEIYEAMRYSVLAKRTKRAPPVMCIAACELFGG 71
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
+ A P ACALEM+H SLIHDDLP +D+ RR +P++H V+G AILAGDAL L
Sbjct: 72 NRLAAFPTACALEMVHAASLIHDDLPCMDDAPSRRGQPSNHAVYGVDKAILAGDALFPLG 131
Query: 181 LEHVAVNIAG--VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
H+ N V R++R IAE+ A+G G+ AG+F+D+ EG SL E++
Sbjct: 132 FRHIVSNTPSDLVPEPRLLRVIAEIARAVGSTGMAAGQFLDL--EG---SLNSAEFVQEK 186
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
K ++ E + VCG ++ G E++R+R Y R +G+L++V+DD+L+ ++ + K +
Sbjct: 187 KYGEMGECSAVCGGLLAGAEDDEIQRLRRYGRAVGVLYKVIDDVLE----AKSMSKEDEE 242
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFE--ASKAAPLYFLANYIASR 352
+ +Y L G+E A A EL +A +EL FE PLY +Y A R
Sbjct: 243 NEKKKAKSYVSLYGVEKAVEVAEELRTKAKKELDGFEKYGESVQPLYNFVDYAADR 298
>gi|158521674|ref|YP_001529544.1| polyprenyl synthetase [Desulfococcus oleovorans Hxd3]
gi|158510500|gb|ABW67467.1| Polyprenyl synthetase [Desulfococcus oleovorans Hxd3]
Length = 295
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 123/295 (41%), Positives = 176/295 (59%), Gaps = 9/295 (3%)
Query: 64 FEEYMIRKAEQVNKALDEAVV-LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
E Y+ R+ + VN+ALD + P ++ AMR+SL AGGKR+RP+LC+A+ E VGG
Sbjct: 4 LETYLARRQKAVNEALDRILADCVPGGRLFSAMRHSLKAGGKRLRPILCMAAAEAVGGTW 63
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
A+ CA+E+IHT SL+HDDLP +DND RR +PA H F E+TAI AGDAL +LA E
Sbjct: 64 EDALFPGCAIELIHTYSLVHDDLPAIDNDPLRRGQPACHAAFDEATAIFAGDALHTLAFE 123
Query: 183 HVAVN-IAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
++ + R + I + A G G++ G+ DI ++G ++ L +L+ +H KT
Sbjct: 124 VLSSDRYIFFQGKRRLALIHLISRATGNHGMIEGQMRDILAQGGNLGLDQLKELHRLKTG 183
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
L+ A+V GA+ G + ++ YA IGL FQV DD+L+V GK+ G D
Sbjct: 184 ALITASVHAGALTGKATVRQTGKLIEYAENIGLAFQVADDLLNVEGDPLLTGKSIGTDHV 243
Query: 302 SGKATYPKLMGIENAKSFAGELLG---QAIEELAYFEASKAAPLYFLANYIASRQ 353
GKAT+P LMGI+ ++ FA +L+ QAIE L KA PL +A Y+ R+
Sbjct: 244 LGKATFPNLMGIDASRKFAAQLVEKSLQAIESLGI----KANPLRAVAKYVIERK 294
>gi|390577032|ref|ZP_10257072.1| polyprenyl synthetase [Burkholderia terrae BS001]
gi|389931010|gb|EIM93098.1| polyprenyl synthetase [Burkholderia terrae BS001]
Length = 297
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 125/298 (41%), Positives = 180/298 (60%), Gaps = 10/298 (3%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
FE++M ++V AL++ + P ++H+AMRY++L GGKRVRPLLC A+ EL G
Sbjct: 1 MTFEQWMRSVLDRVEGALEQYLPADSTEPARLHEAMRYAVLGGGKRVRPLLCHAAGELTG 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
A+ ALEMIH SL+HDD+P +D+DE RR KP H + E+TA+L GDAL S
Sbjct: 61 AKAECLDAASAALEMIHVYSLVHDDMPCMDDDELRRGKPTVHVKYDEATALLVGDALQSQ 120
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A VA+ ++P + + E+ A G G+ G+ +D+AS G ++ +LE +H K
Sbjct: 121 AF--VALTSDVLAPAQQAALVRELALASGSIGMAGGQAIDLASVGHTLTRPQLETMHRLK 178
Query: 240 TAKLLEAAVVCGAVI-----GGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGK 294
T LL AAV GA+ GG +A ++ + Y+ +GL FQVVDDILDVT S LGK
Sbjct: 179 TGALLRAAVRMGALTGQIENGGPDAKALQSLDAYSAAVGLAFQVVDDILDVTTDSATLGK 238
Query: 295 TAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
TAGKD GK TY ++G++ +++ A +L A + LA F A +A L LA+ + +R
Sbjct: 239 TAGKDAKDGKPTYVSIIGLDASRALAAQLRSDAHQALAPFGA-RAQRLAELADLVVNR 295
>gi|296126942|ref|YP_003634194.1| polyprenyl synthetase [Brachyspira murdochii DSM 12563]
gi|296018758|gb|ADG71995.1| Polyprenyl synthetase [Brachyspira murdochii DSM 12563]
Length = 294
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/295 (40%), Positives = 178/295 (60%), Gaps = 9/295 (3%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVKIHKA----MRYSLLAGGKRVRPLLCIASCELVG 119
+EYM + + +N + E + + +++ + ++Y L AGGKR+RP+L + +CEL
Sbjct: 3 LKEYMNIRLKDINNNI-ENIFDKSDIELENSFIEMLKYPLDAGGKRLRPVLTLLACELFE 61
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
GD A+ A +LE+IHT SL+HDDLP +DND+ RR KP +H +GE+ AIL GD LL+
Sbjct: 62 GDYKKAVIPAVSLELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDGLLTH 121
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A + ++ A V + + + E+ A G+ G+V G+F+D+ E K+++ L+ +H K
Sbjct: 122 AFQLLSK--ADVKDSTLRKLLFELSYAAGINGMVMGQFIDLYYEEKEINFDMLKVLHAKK 179
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
TA ++ AV GA I N ++E + Y IGL FQ+ DDILDV +E LGKT GKD
Sbjct: 180 TAAMIRGAVRLGA-ISSENDNDIENITKYGEAIGLAFQIQDDILDVISDNETLGKTVGKD 238
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYF-LANYIASRQ 353
GK TY K G+E AK A ++ +AIE L ++ S+A + LANYI R+
Sbjct: 239 EKEGKLTYVKQFGLEGAKKEAKKVTEKAIEYLNPYKESEAKNILIELANYIIERK 293
>gi|158320641|ref|YP_001513148.1| polyprenyl synthetase [Alkaliphilus oremlandii OhILAs]
gi|158140840|gb|ABW19152.1| Polyprenyl synthetase [Alkaliphilus oremlandii OhILAs]
Length = 295
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 110/262 (41%), Positives = 165/262 (62%), Gaps = 2/262 (0%)
Query: 93 KAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDE 152
++M+YSL AGGKR+RP+L +AS ++ D MP AC +EMIHT SLIHDDLP +DND+
Sbjct: 34 ESMKYSLFAGGKRLRPILSLASYQMFRDDIEEVMPYACGIEMIHTYSLIHDDLPAMDNDD 93
Query: 153 RRRSKPASHEVFGESTAILAGDALLSLALEHVAVN-IAGVSPDRVVRAIAEMCSAMGVEG 211
RR K +H+V+ E AILAGD LL+ + E + N I + + AI E+ ++ GV G
Sbjct: 94 YRRGKLTNHKVYNEGVAILAGDGLLNYSFELMLENAIKQNDIYKHIVAIKEISNSAGVHG 153
Query: 212 LVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARC 271
++ G+ VD+ SE K + + L+YIH++KTA L+ ++ GA+I G ++ +
Sbjct: 154 MIGGQVVDLESENKIIDKEMLDYIHINKTAALITTSLKVGAIIAGAQEEDIRNMEKVGLN 213
Query: 272 IGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEEL 331
+GL FQ+ DDILDV +LGK+ G+DL K+TYP L+G+E + G L +++L
Sbjct: 214 LGLAFQIKDDILDVVGDEAKLGKSIGRDLEKHKSTYPALIGLEASIEKVGALTNN-VKQL 272
Query: 332 AYFEASKAAPLYFLANYIASRQ 353
+ +SKA L L +Y+ SR+
Sbjct: 273 LHRYSSKAEFLLELCDYLTSRE 294
>gi|402815138|ref|ZP_10864731.1| farnesyl diphosphate synthase [Paenibacillus alvei DSM 29]
gi|402507509|gb|EJW18031.1| farnesyl diphosphate synthase [Paenibacillus alvei DSM 29]
Length = 307
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 111/295 (37%), Positives = 176/295 (59%), Gaps = 4/295 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F +Y+ ++AE++ L + + Q P + ++M YSL+AGGKR+RP+ + +C+ + G+
Sbjct: 13 FVDYVKQQAERIESKLPKMLESQRIVPEPLTQSMLYSLMAGGKRLRPICVLMACDSLNGN 72
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
A P ACA+EMIHT SL+HDDLP +DND+ RR KP +H+VFGE+ AILAGD LL+ A
Sbjct: 73 TQAAEPVACAVEMIHTYSLVHDDLPAMDNDDFRRGKPTNHKVFGEAMAILAGDGLLTRAF 132
Query: 182 EHV--AVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
+ + + GV D + + E+ G+ G+V G+ D+ E +L +LEYIH+HK
Sbjct: 133 QCIVQSTRKHGVPADVSLSIVEELAEFAGMSGMVGGQAADMLGEQGITTLDQLEYIHMHK 192
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T+ L+ ++ G I G + ++++ + Y +GL FQ+ DD+LD+ LGK G D
Sbjct: 193 TSDLIVFSLRSGGRIAGASELQLQALTTYGSKLGLAFQIQDDVLDIIGDETMLGKPKGSD 252
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ SGK TYP +G+E +K L +A + +K L +A+Y+ R +
Sbjct: 253 VKSGKVTYPYFIGLEESKREVERLTEEAKSAIINAGFNKPELLLGMADYLMKRDH 307
>gi|407473843|ref|YP_006788243.1| polyprenyl synthetase [Clostridium acidurici 9a]
gi|407050351|gb|AFS78396.1| polyprenyl synthetase [Clostridium acidurici 9a]
Length = 298
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/265 (43%), Positives = 168/265 (63%), Gaps = 3/265 (1%)
Query: 93 KAMRYSLLAGGKRVRPLLCIASCELVGGDE-SWAMPAACALEMIHTMSLIHDDLPFLDND 151
++M+YS+LAGGKR+RP+L + + ELV A+P A A+EMIHT SLIHDDLP +DND
Sbjct: 34 ESMKYSILAGGKRIRPILTLKAFELVSKSSFEKALPFASAIEMIHTYSLIHDDLPPMDND 93
Query: 152 ERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPD--RVVRAIAEMCSAMGV 209
+ RR KP +H+V+GE+ AILAGDALL+ A E + +I S D ++AI E+ A GV
Sbjct: 94 DFRRGKPTNHKVYGEAMAILAGDALLNFAYETMIESIPETSKDVSGYIKAIKEIGKAAGV 153
Query: 210 EGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYA 269
G++ G+ VDI S+ +S ++L +IH KT+ L+EA+++ GA + + ++ ++ Y
Sbjct: 154 YGMIGGQVVDIISDENIMSEEQLRFIHNKKTSALIEASILSGAFLANASDNQIIALKKYG 213
Query: 270 RCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIE 329
IGL FQ+ DDILD +E+LGK+ G D A+ K TY L G+E + EL +AIE
Sbjct: 214 EAIGLCFQIRDDILDKIGDNEKLGKSVGSDEANKKLTYLTLYGMEKSIEKTHELCKEAIE 273
Query: 330 ELAYFEASKAAPLYFLANYIASRQN 354
L F++ A Y+ R++
Sbjct: 274 ALDIFDSKDTIFFKQFAEYLVYRES 298
>gi|389809734|ref|ZP_10205456.1| farnesyl-diphosphate synthase [Rhodanobacter thiooxydans LCS2]
gi|388441633|gb|EIL97895.1| farnesyl-diphosphate synthase [Rhodanobacter thiooxydans LCS2]
Length = 299
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/297 (41%), Positives = 178/297 (59%), Gaps = 13/297 (4%)
Query: 63 PFEEYMIRKAEQVNKALDEAV--VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
P + +I +AEQ ALD + Q P ++H+AMRY++L GGKR+RPLL A+ +G
Sbjct: 9 PALQSLIERAEQ---ALDRHLPPAGQSPTELHRAMRYAVLGGGKRLRPLLVYATAHALGE 65
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
D AACA+E+IH SL+HDDLP +D+D RR +P H VFGE+ AILAGDAL +LA
Sbjct: 66 DGPQLDAAACAVELIHAYSLVHDDLPAMDDDALRRGRPTCHVVFGEAMAILAGDALQALA 125
Query: 181 L----EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIH 236
E A + ++RA+ C G EG+ G+ +D+A+ G+ ++L ELE++H
Sbjct: 126 FGILAEDAARRTDAATGIAMLRALGHAC---GAEGMAGGQALDLAAVGQTLTLGELEHMH 182
Query: 237 VHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTA 296
KT L+ A+V GA+ G + ++ + YA +GL FQV DDILDV S +GKTA
Sbjct: 183 ACKTGALIRASVQLGALAAGTDEGTLQALDRYAHAVGLAFQVRDDILDVEGESAVIGKTA 242
Query: 297 GKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
GKD A+ K T+P ++G++ +++ EL A+ A +A L LA Y A R+
Sbjct: 243 GKDAAAAKPTFPSIIGLDASRARLAELTDTALAAFAPL-GDRAVLLEELARYAAHRR 298
>gi|119897490|ref|YP_932703.1| geranyltranstransferase [Azoarcus sp. BH72]
gi|119669903|emb|CAL93816.1| Geranyltranstransferase [Azoarcus sp. BH72]
Length = 300
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/265 (42%), Positives = 163/265 (61%), Gaps = 1/265 (0%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPF 147
P ++H+AMRY++L GGKRVRPLL A+ + G ACA+E+IH SL+HDD+P
Sbjct: 35 PERLHEAMRYAVLGGGKRVRPLLVHAAGAIGGAQPERLDRIACAVELIHAYSLVHDDMPC 94
Query: 148 LDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAM 207
+D+D RR KP H + ++TA+L GDAL +LA + +A P R + I + A
Sbjct: 95 MDDDVLRRGKPTVHVEYDDATALLVGDALQTLAFQVLASAPVTDMPTRQLGMIGLLAMAS 154
Query: 208 GVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRN 267
G G+ G+ +D+A+ G+ + L+ELE++H+HKT L+ +V+ GA G + +ER+
Sbjct: 155 GSRGMAGGQAIDLAAVGRQLDLRELEFMHIHKTGALIRCSVLLGAQAGTVDGETLERLDR 214
Query: 268 YARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQA 327
YA+ GLLFQVVDDILD + LGKTAGKD K TY L+G+ +A+ A ++L +A
Sbjct: 215 YAKLTGLLFQVVDDILDAEADTATLGKTAGKDADHDKPTYVSLLGVADARRLAQDMLAEA 274
Query: 328 IEELAYFEASKAAPLYFLANYIASR 352
+ L A +A L LANYI R
Sbjct: 275 LAALEPLGA-RAGHLAALANYIVHR 298
>gi|423615482|ref|ZP_17591316.1| hypothetical protein IIO_00808 [Bacillus cereus VD115]
gi|401260019|gb|EJR66192.1| hypothetical protein IIO_00808 [Bacillus cereus VD115]
Length = 296
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/271 (44%), Positives = 177/271 (65%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR+RPLL A+ + G + + + AACALEMIHT SL+HDD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + V A +S ++ VR + E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQIVMAYEQKEISAEKKVRLVLEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+V G+ D+ +EGK +++ ELEYIH HKT KLLE AV+ GA++ + E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGAILSNATKEQEE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++ +A+ IGL FQ+ DDILDV + EE+GK G D+++ K+TY L ++ AK+ E
Sbjct: 207 KLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKNILEET 266
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A + ++ + + L + + IA R N
Sbjct: 267 IAKAKDAISSLQL-QDEYLLSICDLIAKRNN 296
>gi|389818539|ref|ZP_10208820.1| geranyltranstransferase [Planococcus antarcticus DSM 14505]
gi|388463822|gb|EIM06165.1| geranyltranstransferase [Planococcus antarcticus DSM 14505]
Length = 293
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/276 (43%), Positives = 170/276 (61%), Gaps = 3/276 (1%)
Query: 80 DEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASC-ELVGGDESWAMPAACALEMIHTM 138
++ + L P + ++M YSL AGGKR+RP+L +A EL G + A+ A A+EMIHT
Sbjct: 20 EQILSLSIPNSLKESMHYSLQAGGKRIRPILLLAVLHELSGQEHPDALKVAAAIEMIHTY 79
Query: 139 SLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVR 198
SLIHDDLP +DND+ RR P +H+VFGE+ AILAGDALL+ + VA + VS D VR
Sbjct: 80 SLIHDDLPSMDNDDLRRGMPTNHKVFGEAVAILAGDALLTYSFGIVA-RLQHVSSDDKVR 138
Query: 199 AIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGN 258
+ M + G EG+V G+ +DI E K ++L+ELE +H KT LL +++ G ++ +
Sbjct: 139 LMDLMSVSSGAEGMVGGQVLDIEGEEKKLTLEELEQVHRLKTGALLTYSILAGGILAQAS 198
Query: 259 AIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKS 318
E+ + + IGL FQ+ DDILDVT +S+ELGKTAGKD +S K+TYP L+ + AK
Sbjct: 199 NEEILALSRFGEHIGLAFQIQDDILDVTGTSQELGKTAGKDESSEKSTYPGLLTLPKAKE 258
Query: 319 FAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+AI L + KA L L I R++
Sbjct: 259 KLEFHASEAINALQSLKGEKAL-LMQLTQLIVQRKS 293
>gi|229075886|ref|ZP_04208862.1| Geranyltranstransferase [Bacillus cereus Rock4-18]
gi|229098650|ref|ZP_04229590.1| Geranyltranstransferase [Bacillus cereus Rock3-29]
gi|229104806|ref|ZP_04235467.1| Geranyltranstransferase [Bacillus cereus Rock3-28]
gi|423441083|ref|ZP_17417989.1| hypothetical protein IEA_01413 [Bacillus cereus BAG4X2-1]
gi|423448761|ref|ZP_17425640.1| hypothetical protein IEC_03369 [Bacillus cereus BAG5O-1]
gi|423464157|ref|ZP_17440925.1| hypothetical protein IEK_01344 [Bacillus cereus BAG6O-1]
gi|423533499|ref|ZP_17509917.1| hypothetical protein IGI_01331 [Bacillus cereus HuB2-9]
gi|423541245|ref|ZP_17517636.1| hypothetical protein IGK_03337 [Bacillus cereus HuB4-10]
gi|423622735|ref|ZP_17598513.1| hypothetical protein IK3_01333 [Bacillus cereus VD148]
gi|228678679|gb|EEL32895.1| Geranyltranstransferase [Bacillus cereus Rock3-28]
gi|228684729|gb|EEL38667.1| Geranyltranstransferase [Bacillus cereus Rock3-29]
gi|228707201|gb|EEL59398.1| Geranyltranstransferase [Bacillus cereus Rock4-18]
gi|401129355|gb|EJQ37038.1| hypothetical protein IEC_03369 [Bacillus cereus BAG5O-1]
gi|401172433|gb|EJQ79654.1| hypothetical protein IGK_03337 [Bacillus cereus HuB4-10]
gi|401260855|gb|EJR67023.1| hypothetical protein IK3_01333 [Bacillus cereus VD148]
gi|402417744|gb|EJV50044.1| hypothetical protein IEA_01413 [Bacillus cereus BAG4X2-1]
gi|402420424|gb|EJV52695.1| hypothetical protein IEK_01344 [Bacillus cereus BAG6O-1]
gi|402463718|gb|EJV95418.1| hypothetical protein IGI_01331 [Bacillus cereus HuB2-9]
Length = 296
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/271 (44%), Positives = 177/271 (65%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR+RPLL A+ + G + + + AACALEMIHT SL+HDD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + V A +S ++ VR + E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQIVMAYEQKEISAEKKVRLVLEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+V G+ D+ +EGK +++ ELEYIH HKT KLLE AV+ GA++ + E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGAILSNATKEQEE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++ +A+ IGL FQ+ DDILDV + EE+GK G D+++ K+TY L ++ AK+ E
Sbjct: 207 KLLEFAKNIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKNILEET 266
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A + ++ + + L + + IA R N
Sbjct: 267 IAKAKDAISSLQL-QDEYLLSICDLIAKRNN 296
>gi|423483771|ref|ZP_17460461.1| hypothetical protein IEQ_03549 [Bacillus cereus BAG6X1-2]
gi|401141322|gb|EJQ48877.1| hypothetical protein IEQ_03549 [Bacillus cereus BAG6X1-2]
Length = 297
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/273 (45%), Positives = 176/273 (64%), Gaps = 6/273 (2%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR+RPLL A+ + G + + + AACALEMIHT SLIHDD
Sbjct: 28 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHDD 87
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + + A +S ++ VR + E+
Sbjct: 88 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVFEL 147
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+VAG+ D+ +EGK +++ ELEYIH HKT KLLE AV+ GA+I + E
Sbjct: 148 AKAAGPEGMVAGQVADMEAEGKRLTISELEYIHKHKTGKLLEFAVLAGAIISDATEEQEE 207
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++ +A+ IGL FQ+ DDILDV EE+GK G D ++ K+TY L ++ AKS E
Sbjct: 208 KLLAFAKYIGLAFQIRDDILDVEGIEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEET 267
Query: 324 LGQAIEELAYFEASKAAPLYFLA--NYIASRQN 354
+ +A + ++ + Y LA + IA R N
Sbjct: 268 IAKAKDSISSLQLQDE---YLLAICDLIAKRNN 297
>gi|422338359|ref|ZP_16419319.1| geranyltranstransferase [Fusobacterium nucleatum subsp. polymorphum
F0401]
gi|355372275|gb|EHG19616.1| geranyltranstransferase [Fusobacterium nucleatum subsp. polymorphum
F0401]
Length = 297
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/296 (39%), Positives = 176/296 (59%), Gaps = 9/296 (3%)
Query: 64 FEEYMIRKAE----QVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
F+ Y+ K ++ K L E L P I K M Y++L GGKR+RP L A+ EL+
Sbjct: 4 FQVYLKEKTNFFETELKKELQE---LSYPETIAKGMEYAVLNGGKRLRPFLLFATLELLN 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
+ + + +A ALEMIH+ SL+HDDLP LDND+ RR K +H+VFGE+ IL GD+LL+
Sbjct: 61 ENINKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTY 120
Query: 180 ALEHVAV-NIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
A ++ N+ +S +++V I++ G++G++ G+ +DI SE K + L+ L+YIH H
Sbjct: 121 AFYVLSQKNLEFLSFEQIVNIISKTSEYAGIKGMIGGQMIDIQSENKKIDLETLKYIHSH 180
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT KL++ + +I + E + YA IGL FQV DDILDV + EELGK G
Sbjct: 181 KTGKLIKLPIEIACIIANVEKDKKEVLEEYANLIGLAFQVKDDILDVEGTFEELGKPVGS 240
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELA-YFEASKAAPLYFLANYIASRQ 353
D+ KATYP ++G+E +K + + +A E + F K L LA++I +R
Sbjct: 241 DVDLHKATYPSILGMEESKKILNDTVEKAKEIIKNKFGEEKGKNLISLADFIKNRN 296
>gi|404475626|ref|YP_006707057.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli
B2904]
gi|404437115|gb|AFR70309.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli
B2904]
Length = 295
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 111/260 (42%), Positives = 159/260 (61%), Gaps = 3/260 (1%)
Query: 95 MRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERR 154
++Y L AGGKR+RP+L +CEL GD A+ A +LE+IHT SL+HDDLP +DND+ R
Sbjct: 37 LKYPLDAGGKRLRPILTCLACELFNGDYKKAIIPAVSLELIHTYSLVHDDLPAMDNDDLR 96
Query: 155 RSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVA 214
R KP +H +GE+ AIL GD LL+ + E ++ A V+ + + + E+ A GV G+V
Sbjct: 97 RGKPTTHVKYGEANAILVGDGLLTHSFEILSN--ANVNDKTLRKLLYEISYAAGVSGMVM 154
Query: 215 GEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGL 274
G+F+D+ E +D+ + L+ +H KT ++ AV GA+ I +E + Y IGL
Sbjct: 155 GQFIDLYYEERDIDFEMLKILHSKKTGAMIRGAVRVGAIASEKENINLENITKYGEAIGL 214
Query: 275 LFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYF 334
FQ+ DDILDV +E LGKT GKD GK TY K G+E AK A E +AI+ L +
Sbjct: 215 AFQIQDDILDVISDNETLGKTVGKDEKEGKLTYVKQFGLEGAKEKAMETSKEAIDYLNVY 274
Query: 335 EASKAAPLYF-LANYIASRQ 353
+ ++A + LANYI R+
Sbjct: 275 DDNEAKNILIELANYIVERK 294
>gi|229117675|ref|ZP_04247045.1| Geranyltranstransferase [Bacillus cereus Rock1-3]
gi|423377963|ref|ZP_17355247.1| hypothetical protein IC9_01316 [Bacillus cereus BAG1O-2]
gi|423547482|ref|ZP_17523840.1| hypothetical protein IGO_03917 [Bacillus cereus HuB5-5]
gi|228665767|gb|EEL21239.1| Geranyltranstransferase [Bacillus cereus Rock1-3]
gi|401179203|gb|EJQ86376.1| hypothetical protein IGO_03917 [Bacillus cereus HuB5-5]
gi|401636229|gb|EJS53983.1| hypothetical protein IC9_01316 [Bacillus cereus BAG1O-2]
Length = 296
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/271 (44%), Positives = 177/271 (65%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR+RPLL A+ + G + + + AACALEMIHT SL+HDD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + V A +S ++ VR + E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQIVMAYEQKEISAEKKVRLVLEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+V G+ D+ +EGK +++ ELEYIH HKT KLLE AV+ GA++ + E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGAILSNATKEQEE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++ +A+ IGL FQ+ DDILDV + EE+GK G D+++ K+TY L ++ AK+ E
Sbjct: 207 KLLEFAKNIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKNILEET 266
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A + ++ + + L + + IA R N
Sbjct: 267 IAKAKDAISSLQL-QDEYLLSICDLIAKRNN 296
>gi|425073666|ref|ZP_18476772.1| hypothetical protein HMPREF1310_03123 [Proteus mirabilis WGLW4]
gi|404594937|gb|EKA95492.1| hypothetical protein HMPREF1310_03123 [Proteus mirabilis WGLW4]
Length = 307
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 129/306 (42%), Positives = 181/306 (59%), Gaps = 6/306 (1%)
Query: 55 TDIPLPTFPFEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCI 112
++ L T F + + ++V++AL +A+ P + + +AMRY L GGKR+RP L
Sbjct: 2 SNATLCTDAFRQKLHSAHQRVDEALKQALQTLPFSDMPLSQAMRYGALLGGKRLRPFLVY 61
Query: 113 ASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILA 172
E+ + A A+E IH SLIHDDLP +DND+ RR KP H FGE+ AILA
Sbjct: 62 TVGEMFNVPVANLDVPAAAIECIHAYSLIHDDLPAMDNDDLRRGKPTCHIEFGEANAILA 121
Query: 173 GDALLSLALEHVAVN-IAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKE 231
GDAL +LA E +A N + V+ V IAE+ +A G+ G+ G+ +D+ +E K + L
Sbjct: 122 GDALQTLAFEILAKNAMPDVAIADRVAMIAELATASGLAGMCGGQALDLDAEDKSIDLVA 181
Query: 232 LEYIHVHKTAKLLEAAVVCGAVIGGGNAIEV-ERVRNYARCIGLLFQVVDDILDVTKSSE 290
LE IH+HKT L+ AAV GA+ G +V + YA IGL FQV DDILDV S+E
Sbjct: 182 LEKIHLHKTGALIRAAVRLGALSAGQKGHDVLPALDKYAHSIGLAFQVQDDILDVIGSTE 241
Query: 291 ELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASK--AAPLYFLANY 348
E GK G D +GK+TYP L+G+ A+ A EL +A++ LA+ E + + L LAN+
Sbjct: 242 ETGKRQGSDQEAGKSTYPALLGLAQAQKKAQELYNEALDALAFLEQYEYDTSTLKQLANF 301
Query: 349 IASRQN 354
I R+N
Sbjct: 302 IVERKN 307
>gi|229019397|ref|ZP_04176220.1| Geranyltranstransferase [Bacillus cereus AH1273]
gi|229025640|ref|ZP_04182046.1| Geranyltranstransferase [Bacillus cereus AH1272]
gi|228735638|gb|EEL86227.1| Geranyltranstransferase [Bacillus cereus AH1272]
gi|228741867|gb|EEL92044.1| Geranyltranstransferase [Bacillus cereus AH1273]
Length = 297
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 121/271 (44%), Positives = 177/271 (65%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR+RPLL A+ + G +++ + AACALEMIHT SLIHDD
Sbjct: 28 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLIHDD 87
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAV-NIAGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + + +S ++ VR + E+
Sbjct: 88 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMTYEQKEISAEKKVRLVLEL 147
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+VAG+ D+ +EGK +++ ELEYIH HKT KLLE AV+ GA++ + E
Sbjct: 148 AKAAGPEGMVAGQVADMEAEGKRLTINELEYIHKHKTGKLLEFAVLAGAILSDATEEQEE 207
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++ +A+ IGL FQ+ DDILDV + EE+GK G D ++ K+TY L ++ AKS E
Sbjct: 208 KLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEET 267
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A + ++ + + L + + IA R N
Sbjct: 268 IAKAKDSISSLQL-QDEYLLSICDLIAKRNN 297
>gi|431806893|ref|YP_007233791.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli
P43/6/78]
gi|430780252|gb|AGA65536.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli
P43/6/78]
Length = 295
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 111/260 (42%), Positives = 159/260 (61%), Gaps = 3/260 (1%)
Query: 95 MRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERR 154
++Y L AGGKR+RP+L +CEL GD A+ A +LE+IHT SL+HDDLP +DND+ R
Sbjct: 37 LKYPLDAGGKRLRPILTCLACELFNGDYKKAIIPAVSLELIHTYSLVHDDLPAMDNDDLR 96
Query: 155 RSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVA 214
R KP +H +GE+ AIL GD LL+ + E ++ A V+ + + + E+ A GV G+V
Sbjct: 97 RGKPTTHVKYGEANAILVGDGLLTHSFE--ILSNANVNDKTLRKLLYEISYAAGVSGMVM 154
Query: 215 GEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGL 274
G+F+D+ E +D+ + L+ +H KT ++ AV GA+ I +E + Y IGL
Sbjct: 155 GQFIDLYYEERDIDFEMLKILHSKKTGAMIRGAVRVGAIASEKENINLENITKYGEAIGL 214
Query: 275 LFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYF 334
FQ+ DDILDV +E LGKT GKD GK TY K G+E AK A E +AI+ L +
Sbjct: 215 AFQIQDDILDVISDNETLGKTVGKDEKDGKLTYVKQFGLEGAKEKAIETSKEAIDYLNVY 274
Query: 335 EASKAAPLYF-LANYIASRQ 353
+ ++A + LANYI R+
Sbjct: 275 DDNEAKNILIELANYIVERK 294
>gi|420247661|ref|ZP_14751056.1| geranylgeranyl pyrophosphate synthase [Burkholderia sp. BT03]
gi|398070555|gb|EJL61849.1| geranylgeranyl pyrophosphate synthase [Burkholderia sp. BT03]
Length = 293
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 124/294 (42%), Positives = 179/294 (60%), Gaps = 6/294 (2%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
FE++M ++V AL++ + P ++H+AMRY++L GGKRVRPLLC A+ EL G
Sbjct: 1 MTFEQWMRSVLDRVEGALEQYLPADSTEPARLHEAMRYAVLGGGKRVRPLLCHAAGELTG 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
A+ ALEMIH SL+HDD+P +D+DE RR KP H + E+TA+L GDAL S
Sbjct: 61 AKAECLDAASAALEMIHVYSLVHDDMPCMDDDELRRGKPTVHVKYDEATALLVGDALQSQ 120
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A VA+ ++P + + E+ A G G+ G+ +D+AS G ++ +LE +H K
Sbjct: 121 AF--VALTSDVLAPAQQAALVRELALASGSIGMAGGQAIDLASVGHTLTRPQLETMHRLK 178
Query: 240 TAKLLEAAVVCGAVIGGG-NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
T LL AAV GA+ G +A ++ + Y+ +GL FQVVDDILDVT S LGKTAGK
Sbjct: 179 TGALLRAAVRMGALTGETPDAKALQSLDAYSAAVGLAFQVVDDILDVTTDSATLGKTAGK 238
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
D GK TY ++G++ +++ A +L A + LA F A +A L LA+ + +R
Sbjct: 239 DAKDGKPTYVSIIGLDASRALAAQLRSDAHQALAPFGA-RAQRLAELADLVVNR 291
>gi|423521962|ref|ZP_17498435.1| hypothetical protein IGC_01345 [Bacillus cereus HuA4-10]
gi|401176624|gb|EJQ83819.1| hypothetical protein IGC_01345 [Bacillus cereus HuA4-10]
Length = 297
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/271 (45%), Positives = 177/271 (65%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR+RPLL A+ + G + + + AACALEMIHT SLIHDD
Sbjct: 28 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHDD 87
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + + A +S ++ VR + E+
Sbjct: 88 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAEKKVRLVLEL 147
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+VAG+ D+ +EGK +++ ELEYIH HKT KLLE AV+ GA++ + E
Sbjct: 148 AKAAGPEGMVAGQVADMEAEGKRLTINELEYIHKHKTGKLLEFAVLAGAILSDATEEQEE 207
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++ +A+ IGL FQ+ DDILDV + EE+GK G D ++ K+TY L ++ AKS E
Sbjct: 208 KLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEEK 267
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A + ++ + + L + + IA R N
Sbjct: 268 IAKAKDSISSLQL-QDEYLLSICDLIAKRNN 297
>gi|171915589|ref|ZP_02931059.1| geranylgeranyl pyrophosphate synthase [Verrucomicrobium spinosum
DSM 4136]
Length = 295
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 129/293 (44%), Positives = 184/293 (62%), Gaps = 8/293 (2%)
Query: 64 FEEYMIRKAEQVNKALDE--AVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
+ Y+ ++ V+ ALD A PV IHKAMR+SL AGGKR+RP+LC+A+ E GG
Sbjct: 5 LKSYLTQRVAFVDAALDRFVAAAETRPVTIHKAMRHSLFAGGKRLRPILCLAAAEACGGS 64
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
A+ AACA+E +HT SLIHDDLP +D+D+ RR P H+VFGE+ A+LAGDAL +L+
Sbjct: 65 LENALYAACAVECLHTYSLIHDDLPCMDDDDMRRGVPTCHKVFGEAMALLAGDALQALSF 124
Query: 182 EHVAVN--IAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
E VA SP +V E+ G LV G+ D+ EGK + +++L YIH K
Sbjct: 125 ELVAQTPVTHRHSPAAMV---LELARTAGSLHLVGGQVADLEGEGKKLGIEDLRYIHESK 181
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
TA LL ++V G + +V+ + ++ GL FQ++DDILDVT+++E+LGK+AGKD
Sbjct: 182 TAALLTSSVKLGGMSADAQLDQVQALHDFGMATGLAFQIIDDILDVTQTTEKLGKSAGKD 241
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
+AS K+TYP LMG++ ++ A L G+A + L F L+ LA+Y+ R
Sbjct: 242 VASEKSTYPALMGLDASRDEAHRLTGKARQALEVF-GPNGHWLHQLADYLLKR 293
>gi|254302823|ref|ZP_04970181.1| dimethylallyltranstransferase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148323015|gb|EDK88265.1| dimethylallyltranstransferase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 297
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 118/296 (39%), Positives = 173/296 (58%), Gaps = 9/296 (3%)
Query: 64 FEEYMIRKAE----QVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
F+ Y+ K ++ K L E L P I K M Y++L GGKR+RP L A+ EL+
Sbjct: 4 FQVYLKEKTSFFETELKKELQE---LSYPETIAKGMEYAILNGGKRLRPFLLFATLELLN 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
+ + +A ALEMIH+ SL+HDDLP LDND+ RR K +H+VFGE+ IL GD+LL+
Sbjct: 61 QNIEKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTY 120
Query: 180 ALEHVAV-NIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
A ++ N+ +S +++V I++ G+ G++ G+ +DI SE K + L+ L+YIH H
Sbjct: 121 AFYILSQKNLKFLSSEQIVNIISKTSEYAGINGMIGGQMIDIESENKKIDLETLKYIHSH 180
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT KL++ + +I + E + YA IGL FQV DDILDV + EELGK G
Sbjct: 181 KTGKLIKLPIEIACIIANVEKDKKEVLEEYANLIGLAFQVKDDILDVEGTFEELGKPVGS 240
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELA-YFEASKAAPLYFLANYIASRQ 353
D+ KATYP ++G+E +K + + +A E + F K L LA++I R
Sbjct: 241 DVDLHKATYPSILGMEESKKILNDTVEKAKEIIKNNFGEEKGKILISLADFIKDRN 296
>gi|163941936|ref|YP_001646820.1| polyprenyl synthetase [Bacillus weihenstephanensis KBAB4]
gi|229135000|ref|ZP_04263806.1| Geranyltranstransferase [Bacillus cereus BDRD-ST196]
gi|229168922|ref|ZP_04296639.1| Geranyltranstransferase [Bacillus cereus AH621]
gi|423368233|ref|ZP_17345665.1| hypothetical protein IC3_03334 [Bacillus cereus VD142]
gi|423512293|ref|ZP_17488824.1| hypothetical protein IG3_03790 [Bacillus cereus HuA2-1]
gi|423518883|ref|ZP_17495364.1| hypothetical protein IG7_03953 [Bacillus cereus HuA2-4]
gi|423591823|ref|ZP_17567854.1| hypothetical protein IIG_00691 [Bacillus cereus VD048]
gi|423660971|ref|ZP_17636140.1| hypothetical protein IKM_01368 [Bacillus cereus VDM022]
gi|423669765|ref|ZP_17644794.1| hypothetical protein IKO_03462 [Bacillus cereus VDM034]
gi|163864133|gb|ABY45192.1| Polyprenyl synthetase [Bacillus weihenstephanensis KBAB4]
gi|228614514|gb|EEK71622.1| Geranyltranstransferase [Bacillus cereus AH621]
gi|228648502|gb|EEL04531.1| Geranyltranstransferase [Bacillus cereus BDRD-ST196]
gi|401080984|gb|EJP89264.1| hypothetical protein IC3_03334 [Bacillus cereus VD142]
gi|401159938|gb|EJQ67317.1| hypothetical protein IG7_03953 [Bacillus cereus HuA2-4]
gi|401231956|gb|EJR38458.1| hypothetical protein IIG_00691 [Bacillus cereus VD048]
gi|401298892|gb|EJS04492.1| hypothetical protein IKO_03462 [Bacillus cereus VDM034]
gi|401301012|gb|EJS06601.1| hypothetical protein IKM_01368 [Bacillus cereus VDM022]
gi|402449264|gb|EJV81101.1| hypothetical protein IG3_03790 [Bacillus cereus HuA2-1]
Length = 297
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/271 (45%), Positives = 177/271 (65%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR+RPLL A+ + G + + + AACALEMIHT SLIHDD
Sbjct: 28 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHDD 87
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + + A +S ++ VR + E+
Sbjct: 88 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 147
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+VAG+ D+ +EGK +++ ELEYIH HKT KLLE AV+ GA++ + E
Sbjct: 148 AKAAGPEGMVAGQVADMEAEGKRLTINELEYIHNHKTGKLLEFAVLAGAILSDATEEQEE 207
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++ +A+ IGL FQ+ DDILDV + EE+GK G D ++ K+TY L ++ AKS E
Sbjct: 208 KLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEEK 267
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A + ++ + + L + + IA R N
Sbjct: 268 IAKAKDSISSLQL-QDEYLLSICDLIAKRNN 297
>gi|220934012|ref|YP_002512911.1| farnesyl-diphosphate synthase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219995322|gb|ACL71924.1| farnesyl-diphosphate synthase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 299
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 121/297 (40%), Positives = 181/297 (60%), Gaps = 13/297 (4%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
E+++ ++ +ALD + + P ++H+AMRYS L GGKRVRP+L + + +G
Sbjct: 6 MEQHISALRARLEQALDRWIPAETTHPARLHEAMRYSALGGGKRVRPVLVYGAGQALGVA 65
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
ACA+E+IH SLIHDDLP +DND+ RR KP H+ F E+ AILAGDA+ +LA
Sbjct: 66 PERLDGPACAVELIHVYSLIHDDLPAMDNDDLRRGKPTCHKAFDEAMAILAGDAMQALAF 125
Query: 182 EHVAVNIAGV-SPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKT 240
+ ++++ + P R +R + + A G G+ G+ +D+ S GK + + +LE +HVHKT
Sbjct: 126 QILSMDPDMLDDPARRLRMMETLARAAGSRGMAGGQAIDLGSVGKQLDIAQLEDMHVHKT 185
Query: 241 AKLLEAAVVCGAVIGGGNAIEV-----ERVRNYARCIGLLFQVVDDILDVTKSSEELGKT 295
L+ A+V+ GA+ +A EV E + +A+C+GL FQ+ DDILDV + LGKT
Sbjct: 186 GALIRASVLLGAL----SAPEVDKAHLENLDRFAKCVGLAFQIRDDILDVEGDTATLGKT 241
Query: 296 AGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
G D A K TYP L+G+E ++ A EL+ QA+ L F A +A L ++A YI R
Sbjct: 242 QGADQALNKPTYPALIGLEESRQAARELVDQALGALEGFGA-EADLLRWIARYIVER 297
>gi|294101849|ref|YP_003553707.1| geranyltranstransferase [Aminobacterium colombiense DSM 12261]
gi|293616829|gb|ADE56983.1| Geranyltranstransferase [Aminobacterium colombiense DSM 12261]
Length = 300
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 113/252 (44%), Positives = 158/252 (62%), Gaps = 2/252 (0%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPF 147
P ++ ++M YSL AGGKR+RP+LC+ + E VGG++ +P A ALEM+HT SLIHDDLP
Sbjct: 33 PPRLWESMTYSLQAGGKRLRPILCVKAAESVGGEKEKVLPMALALEMVHTASLIHDDLPA 92
Query: 148 LDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIA--GVSPDRVVRAIAEMCS 205
+DND RR KP +H ++G++ AILAGDALL+ A E+ + GV P +V+A++
Sbjct: 93 MDNDSLRRGKPTNHMIYGDALAILAGDALLAWAFEYSLKGLMDRGVPPSSIVQALSIFAQ 152
Query: 206 AMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERV 265
A+G G+ G+ +D SL + I + KTA LL+A++V GA++GG +
Sbjct: 153 AVGPSGICGGQVLDTDPASFTSSLSFVANIALQKTAVLLQASLVTGAILGGASQEIAGAF 212
Query: 266 RNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLG 325
Y R +GL FQ+VDDILDVT S EELGKT GKD A K T+ G+E A+ A +
Sbjct: 213 GKYGRHLGLAFQIVDDILDVTSSPEELGKTPGKDAAQQKITFVTQFGLEEARKMALKESK 272
Query: 326 QAIEELAYFEAS 337
+A E L +S
Sbjct: 273 EAAESLFMLGSS 284
>gi|229061868|ref|ZP_04199198.1| Geranyltranstransferase [Bacillus cereus AH603]
gi|228717429|gb|EEL69097.1| Geranyltranstransferase [Bacillus cereus AH603]
Length = 297
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/271 (45%), Positives = 177/271 (65%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR+RPLL A+ + G + + + AACALEMIHT SLIHDD
Sbjct: 28 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHDD 87
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + + A +S ++ VR + E+
Sbjct: 88 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 147
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+VAG+ D+ +EGK +++ ELEYIH HKT KLLE AV+ GA++ + E
Sbjct: 148 AKAAGPEGMVAGQVADMEAEGKRLTINELEYIHNHKTGKLLEFAVLAGAILSDATEEQEE 207
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++ +A+ IGL FQ+ DDILDV + EE+GK G D ++ K+TY L ++ AKS E
Sbjct: 208 KLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEEK 267
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A + ++ + + L + + IA R N
Sbjct: 268 IAKAKDSISSLQL-QDEYLLSICDLIAKRNN 297
>gi|407706706|ref|YP_006830291.1| hypothetical protein MC28_3470 [Bacillus thuringiensis MC28]
gi|407384391|gb|AFU14892.1| Geranyltranstransferase [Bacillus thuringiensis MC28]
Length = 296
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 120/271 (44%), Positives = 177/271 (65%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR+RPLL A+ + G + + + AACALEMIHT SL+HDD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + V A +S ++ VR + E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQIVMAYEQKEISAEKKVRLVLEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+V G+ D+ +EGK +++ ELEYIH HKT KLLE AV+ GA++ + E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGAILSNATKEQEE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++ +A+ IGL FQ+ DDILDV + EE+GK G D+++ K+TY L ++ AK+ E
Sbjct: 207 KLLEFAKNIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKNILEET 266
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A + ++ + + L + + IA R N
Sbjct: 267 ITKAKDAISSLQL-QDEYLLSICDLIAKRNN 296
>gi|423612401|ref|ZP_17588262.1| hypothetical protein IIM_03116 [Bacillus cereus VD107]
gi|401245990|gb|EJR52342.1| hypothetical protein IIM_03116 [Bacillus cereus VD107]
Length = 297
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/271 (45%), Positives = 175/271 (64%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR+RPLL A+ + G + + + AACALEMIHT SLIHDD
Sbjct: 28 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHDD 87
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + + A +S ++ VR + E+
Sbjct: 88 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEPKEISAEKKVRLVLEL 147
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+VAG+ D+ +EGK +++ ELEYIH HKT KLLE AV+ GA++ + E
Sbjct: 148 AKAAGPEGMVAGQVADMEAEGKRLTINELEYIHKHKTGKLLEFAVLAGAILSDATEEQEE 207
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++ +A+ IGL FQ+ DDILDV + EE+GK G D ++ K+TY L ++ AKS E
Sbjct: 208 KLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEET 267
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A + + + L + + IA R N
Sbjct: 268 IAKAKDAINSLQLQDEY-LLSICDLIAKRNN 297
>gi|421860464|ref|ZP_16292588.1| geranylgeranyl pyrophosphate synthase [Paenibacillus popilliae ATCC
14706]
gi|410829946|dbj|GAC43025.1| geranylgeranyl pyrophosphate synthase [Paenibacillus popilliae ATCC
14706]
Length = 284
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 118/268 (44%), Positives = 162/268 (60%), Gaps = 2/268 (0%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPF 147
P ++ +AM YSL+AGGKR+RPL I +CE +GG A P ACA+EM+HT SL+HDDLP
Sbjct: 16 PAELKEAMLYSLMAGGKRLRPLCVIIACESLGGPLEAADPVACAIEMLHTYSLVHDDLPA 75
Query: 148 LDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVS-PDRVVRAIAEMCSA 206
+DND+ RR KP +H+VFGE+ AILAGDALL+ A VA + S P + I E S
Sbjct: 76 MDNDDYRRGKPTNHKVFGEALAILAGDALLTHAFYTVAQSARRHSIPAEIALTITEELSV 135
Query: 207 M-GVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERV 265
G+ G+V G+ DI E +L +LEYIH+HKT+ L+ A+ GA + G N ++ +
Sbjct: 136 YAGMRGMVGGQTADILGEQGMTTLVQLEYIHLHKTSDLIVFALRAGAHLAGANGSQLNAL 195
Query: 266 RNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLG 325
+ +GL FQ+ DDILD+T LGK G D GK TYP +G+E +K L
Sbjct: 196 TEFGTKLGLAFQIQDDILDITGEEVLLGKPTGSDEKCGKVTYPYFIGLEASKQEVVRLTE 255
Query: 326 QAIEELAYFEASKAAPLYFLANYIASRQ 353
+A + + A LY LA+++ RQ
Sbjct: 256 EAKQAVRQAGFPFPARLYELADFLLKRQ 283
>gi|300870060|ref|YP_003784931.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli
95/1000]
gi|300687759|gb|ADK30430.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli
95/1000]
Length = 295
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 111/260 (42%), Positives = 159/260 (61%), Gaps = 3/260 (1%)
Query: 95 MRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERR 154
++Y L AGGKR+RP+L +CEL GD A+ A +LE+IHT SL+HDDLP +DND+ R
Sbjct: 37 LKYPLDAGGKRLRPILTCLACELFNGDYKKAIIPAVSLELIHTYSLVHDDLPAMDNDDLR 96
Query: 155 RSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVA 214
R KP +H +GE+ AIL GD LL+ + E ++ A V+ + + + E+ A GV G+V
Sbjct: 97 RGKPTTHVKYGEANAILVGDGLLTHSFE--ILSNANVNDKTLRKLLYEISYAAGVSGMVM 154
Query: 215 GEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGL 274
G+F+D+ E +D+ + L+ +H KT ++ AV GA+ I +E + Y IGL
Sbjct: 155 GQFIDLYYEERDIDFEMLKILHSKKTGAMIRGAVRVGAIASEKENINLENITKYGEAIGL 214
Query: 275 LFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYF 334
FQ+ DDILDV +E LGKT GKD GK TY K G+E AK A E +AI+ L +
Sbjct: 215 AFQIQDDILDVISDNETLGKTVGKDEKEGKLTYVKQFGLEGAKEKAIETSKEAIDYLNVY 274
Query: 335 EASKAAPLYF-LANYIASRQ 353
+ ++A + LANYI R+
Sbjct: 275 DDNEAKNILIELANYIVERK 294
>gi|358636220|dbj|BAL23517.1| polyprenyl synthetase [Azoarcus sp. KH32C]
Length = 298
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 116/269 (43%), Positives = 166/269 (61%), Gaps = 6/269 (2%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPF 147
P ++H AMRY++L GGKRVRPLL A+ L G D + ACA+E+IH SL+HDDLP
Sbjct: 32 PQRLHAAMRYAVLGGGKRVRPLLVHAAGRLAGADPARLDRIACAVELIHAYSLVHDDLPC 91
Query: 148 LDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAM 207
+D+D RR KP H + E+TA+L GDAL +LA + +A +P + IA + A
Sbjct: 92 MDDDVLRRGKPTVHVEYDEATALLVGDALQALAFQVLADTPLAATPAVQLEMIALLGRAS 151
Query: 208 GVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVER--- 264
G G+ G+ +D+ + GK ++ +ELE++H+HKT L+ A+V+ GA G+A+ E+
Sbjct: 152 GSRGMAGGQAIDLGAVGKQLTREELEFMHIHKTGALIRASVLLGAQC--GDALPAEQLAP 209
Query: 265 VRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELL 324
+ +Y + +GLLFQVVDDILD + LGKTAGKD K TY L+G+ A++ + LL
Sbjct: 210 LDHYGKVVGLLFQVVDDILDAQADTATLGKTAGKDADQNKPTYVTLLGMSEARTLSESLL 269
Query: 325 GQAIEELAYFEASKAAPLYFLANYIASRQ 353
A E L+ F A L LAN+I R+
Sbjct: 270 ANAQEALSSF-GPGAVRLAELANFIVHRR 297
>gi|52080961|ref|YP_079752.1| polyprenyl synthetase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|319645081|ref|ZP_07999314.1| YqiD protein [Bacillus sp. BT1B_CT2]
gi|404489843|ref|YP_006713949.1| (2E,6E)-farnesyl diphosphate synthase IspA [Bacillus licheniformis
DSM 13 = ATCC 14580]
gi|423682933|ref|ZP_17657772.1| polyprenyl synthetase [Bacillus licheniformis WX-02]
gi|52004172|gb|AAU24114.1| Polyprenyl synthetase,Polyprenyl synthetase [Bacillus licheniformis
DSM 13 = ATCC 14580]
gi|52348839|gb|AAU41473.1| (2E,6E)-farnesyl diphosphate synthase IspA [Bacillus licheniformis
DSM 13 = ATCC 14580]
gi|317392890|gb|EFV73684.1| YqiD protein [Bacillus sp. BT1B_CT2]
gi|383439707|gb|EID47482.1| polyprenyl synthetase [Bacillus licheniformis WX-02]
Length = 296
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 117/271 (43%), Positives = 180/271 (66%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + ++M YSL AGGKR+RP+L +A G DE +P CA+EMIHT SLIHDD
Sbjct: 27 LQAPSILKESMLYSLEAGGKRLRPILVLALLHAYGKDEEAGIPVGCAVEMIHTYSLIHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNI-AGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+++GE+TAILAGDALL+ + + + N+ + VS ++ +R + E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKIYGEATAILAGDALLTESFKMITSNMPSDVSAEKRIRLVNEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
SA G EG+V G+ +D+ +E K VSL EL+ IH KTAKLL +V+ GA++ + E+E
Sbjct: 147 ISAAGAEGMVGGQILDMEAESKSVSLDELQRIHEGKTAKLLSFSVIAGAILADASEKEIE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++R ++ IG+ FQ+ DDILD+ S +++GK G D ++GK+TYP L+ +E A E
Sbjct: 207 KLREFSHHIGIGFQIRDDILDLEGSEDKIGKRIGSDASNGKSTYPSLLSLEGASQKLDEH 266
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A + ++ K +Y + IA+R +
Sbjct: 267 IEKAKQLISELPLEKEL-MYEFCDMIAARDH 296
>gi|423674030|ref|ZP_17648969.1| hypothetical protein IKS_01573 [Bacillus cereus VDM062]
gi|401309581|gb|EJS14914.1| hypothetical protein IKS_01573 [Bacillus cereus VDM062]
Length = 297
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 122/271 (45%), Positives = 176/271 (64%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR RPLL A+ + G + + + AACALEMIHT SLIHDD
Sbjct: 28 LQCPNVLREAMAYSLEAGGKRFRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHDD 87
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + + A +S ++ VR + E+
Sbjct: 88 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 147
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+VAG+ D+ +EGK +++ ELEYIH HKT KLLE AV+ GA++ + E
Sbjct: 148 AKAAGPEGMVAGQVADMEAEGKRLTINELEYIHNHKTGKLLEFAVLAGAILSDATEEQEE 207
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++ +A+ IGL FQ+ DDILDV + EE+GK G D ++ K+TY L ++ AKS E
Sbjct: 208 KLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEEK 267
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A + ++ + + L + + IA R N
Sbjct: 268 IAKAKDSISSLQL-QDEYLLSICDLIAKRNN 297
>gi|6016394|sp|O66126.1|ISPA_MICLU RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
AltName: Full=Geranyltranstransferase
gi|2982677|dbj|BAA25265.1| farnesyl diphosphate synthase [Micrococcus luteus]
Length = 291
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 110/264 (41%), Positives = 165/264 (62%), Gaps = 3/264 (1%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLD 149
++H+A+ YSL AGGKR+RPLL + + + +GG+ +P ALEMIHT SLIHDDLP +D
Sbjct: 30 RLHEAINYSLSAGGKRIRPLLVLTTLDSLGGNAHDGLPFGIALEMIHTYSLIHDDLPAMD 89
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGV 209
ND+ RR K +H+ F E+TAILAGDALL+ A + + +N ++ + + I + +A G
Sbjct: 90 NDDYRRGKLTNHKRFDEATAILAGDALLTDAFQCI-LNTQ-LNAEIKLSLINLLSTASGS 147
Query: 210 EGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYA 269
G+V G+ +D+ E K ++L ELE IH+HKT +L+ AA+V +I N ++E++
Sbjct: 148 NGMVYGQMLDMQGEHKTLTLNELERIHIHKTGELIRAAIVSAGIIMNFNDAQIEQLNIIG 207
Query: 270 RCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIE 329
+ +GL+FQ+ DDILDV S E +GKT G DL + K+TY L+G+E +K + L + +
Sbjct: 208 KNVGLMFQIKDDILDVEGSFENIGKTVGSDLNNDKSTYVSLLGLEASKQLLNDKLTETYD 267
Query: 330 ELAYFEASKAAPLYFLANYIASRQ 353
L + L L YI R
Sbjct: 268 ALKTLQPIN-DNLKTLITYIVERN 290
>gi|218778692|ref|YP_002430010.1| polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01]
gi|218760076|gb|ACL02542.1| Polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01]
Length = 307
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 125/299 (41%), Positives = 188/299 (62%), Gaps = 8/299 (2%)
Query: 59 LPTFPFEEYMIRKAEQVNKALDEAVVLQPP-VKIHKAMRYSLLAGGKRVRPLLCIASCEL 117
L +F + ++ V A+++ + P ++ +AMR+SL AGGKR+RP+LC+ S E
Sbjct: 10 LNSFDLKAFLTEYGRLVVAAMEKRIARYPEESRVTQAMRHSLFAGGKRLRPILCMTSAEA 69
Query: 118 VGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALL 177
VGG++ M A ALE IHT SLIHDDLP LD+D+ RR P H+ F E+TAILAGD LL
Sbjct: 70 VGGNKDHVMDVAAALEFIHTYSLIHDDLPALDDDDYRRGTPTCHKAFDEATAILAGDGLL 129
Query: 178 SLALE---HVAVNIAGVSP-DRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELE 233
+ A E H A + G+ P ++V+ IA + A G G++ G+ +DI E + ++ +ELE
Sbjct: 130 TSAFEILSHAADD--GLLPAEKVLTIIAGISHAAGCNGMILGQMLDIEGEHESLTREELE 187
Query: 234 YIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELG 293
IH +KT ++E +V GA +GGG ++ + YA+ +GL FQV+DDIL+V + +G
Sbjct: 188 DIHNNKTGAMIEVSVFSGAYLGGGTPEQIAALDVYAKNVGLAFQVIDDILNVIGDPKVMG 247
Query: 294 KTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
K G D GK+TYP LMG++ A+ FA L+ +A++ + F+ +K PL +A YI +R
Sbjct: 248 KAVGTDAELGKSTYPALMGLDGAQDFAERLINKALQAIVSFD-NKCDPLRSIATYILTR 305
>gi|114320106|ref|YP_741789.1| farnesyl-diphosphate synthase [Alkalilimnicola ehrlichii MLHE-1]
gi|114226500|gb|ABI56299.1| farnesyl-diphosphate synthase [Alkalilimnicola ehrlichii MLHE-1]
Length = 306
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 114/269 (42%), Positives = 165/269 (61%), Gaps = 3/269 (1%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPF 147
P ++H+AMRYS L+GGKR+RP+L A+ + +G + ACA+E IH SLIHDDLP
Sbjct: 39 PARLHQAMRYSALSGGKRLRPILVFATGQALGAAPTLLDGPACAVECIHAYSLIHDDLPA 98
Query: 148 LDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRV-VRAIAEMCSA 206
+D+DE RR +P H+ F E+TAILAGDAL +LA +A + GV R +R + + A
Sbjct: 99 MDDDELRRGQPTCHKAFDEATAILAGDALQTLAFHILAHDPGGVQNSRARLRMVEVLALA 158
Query: 207 MGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIE-VERV 265
G G+ G+ +D+A+ G+ + + +LE +H+HKT L+ A+V GA+ E ++R+
Sbjct: 159 AGSRGMAGGQAIDLAATGQQLDVAQLEDMHIHKTGALIRASVQLGALAASPVDEELLQRL 218
Query: 266 RNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLG 325
+Y +CIGL FQ+ DDILDV +E LGK G D KATYP L+G+ A+ A L+
Sbjct: 219 DHYGKCIGLAFQIRDDILDVEGETEALGKARGSDQRQAKATYPALLGMREARETADRLVE 278
Query: 326 QAIEELAYFEASKAAPLYFLANYIASRQN 354
A+E L + S A L +A Y R +
Sbjct: 279 DALESLEGLDQS-ADVLRGIAEYCIGRNH 306
>gi|225025925|ref|ZP_03715117.1| hypothetical protein EUBHAL_00161 [Eubacterium hallii DSM 3353]
gi|224956711|gb|EEG37920.1| polyprenyl synthetase [Eubacterium hallii DSM 3353]
Length = 297
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 127/299 (42%), Positives = 175/299 (58%), Gaps = 15/299 (5%)
Query: 65 EEYMIRKAEQVNKALD----EAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
+E + +K E++ + +D E LQ V AM YS+ AGGKR+RP+L + E+ GG
Sbjct: 5 KEQLSKKIEKIEQTIDFYLPEEKGLQKTV--LSAMNYSVKAGGKRLRPMLMAETYEMFGG 62
Query: 121 -DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
D S P A+EMIHT SLIHDDLP LDND RR P +H FGE+ AILAGDALL+
Sbjct: 63 ADSSVIEPFMAAIEMIHTYSLIHDDLPALDNDALRRGMPTAHIKFGEAMAILAGDALLNY 122
Query: 180 ALEHVAVNIAGVSPD-RVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
A E A G + D + +A+ + G+ G++ G+ VD+ E K +S L YIH +
Sbjct: 123 AFETAAKAFDGTNKDIQTAKALQILTRKPGIYGMIGGQTVDVEQENKAISFDTLMYIHNN 182
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KTA L+E A++ GAV+ G + EV + A +G+ FQ+ DDILDV +SEE+GK AG
Sbjct: 183 KTAALIECAMMIGAVLAGASEKEVSMIEQIANKVGIAFQIEDDILDVVSTSEEIGKPAGS 242
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIE---ELAYFEASKAAPLYFLANYIASRQN 354
D +GK TY GIE +K A + +A++ EL Y K + L L Y+ R+N
Sbjct: 243 DEKNGKNTYVLFKGIEQSKKDAEQYTREALQIFDELEY----KNSFLRELLLYLVGRKN 297
>gi|434382488|ref|YP_006704271.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli WesB]
gi|404431137|emb|CCG57183.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli WesB]
Length = 295
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 110/260 (42%), Positives = 158/260 (60%), Gaps = 3/260 (1%)
Query: 95 MRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERR 154
++Y L AGGKR+RP+L +CEL GD A+ A +LE+IHT SL+HDDLP +DND+ R
Sbjct: 37 LKYPLDAGGKRLRPILTCLACELFNGDYKKAIIPAVSLELIHTYSLVHDDLPAMDNDDLR 96
Query: 155 RSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVA 214
R KP +H +GE+ AIL GD L + + E ++ A V+ + + + E+ A GV G+V
Sbjct: 97 RGKPTTHVKYGEANAILVGDGLFTHSFE--ILSNANVNDKTLRKLLYEISYAAGVSGMVM 154
Query: 215 GEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGL 274
G+F+D+ E +D+ + L+ +H KT ++ AV GA+ I +E + Y IGL
Sbjct: 155 GQFIDLYYEERDIDFEMLKILHSKKTGAMIRGAVRVGAIASEKENINLENITKYGEAIGL 214
Query: 275 LFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYF 334
FQ+ DDILDV +E LGKT GKD GK TY K G+E AK A E +AI+ L +
Sbjct: 215 AFQIQDDILDVISDNETLGKTVGKDEKEGKLTYVKQFGLEGAKEKAMETSKEAIDYLNVY 274
Query: 335 EASKAAPLYF-LANYIASRQ 353
+ ++A + LANYI R+
Sbjct: 275 DDNEAKNILIELANYIVERK 294
>gi|228910014|ref|ZP_04073834.1| Geranyltranstransferase [Bacillus thuringiensis IBL 200]
gi|228849531|gb|EEM94365.1| Geranyltranstransferase [Bacillus thuringiensis IBL 200]
Length = 296
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 115/244 (47%), Positives = 164/244 (67%), Gaps = 1/244 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR+RPLL A+ + G + + + AACALEMIHT SL+HDD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGLGAACALEMIHTYSLVHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + + A +S ++ VR + E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+V G+ D+ +EGK +++ ELEYIH HKT KLLE AV+ GA++ + E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++ +A+ IGL FQ+ DDILDV + EE+GK G DL++ K+TY L ++ AK E
Sbjct: 207 KLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDLSNEKSTYTTLFTVDRAKDILEET 266
Query: 324 LGQA 327
+ +A
Sbjct: 267 IAEA 270
>gi|423558242|ref|ZP_17534544.1| hypothetical protein II3_03446 [Bacillus cereus MC67]
gi|401191510|gb|EJQ98532.1| hypothetical protein II3_03446 [Bacillus cereus MC67]
Length = 297
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 121/271 (44%), Positives = 177/271 (65%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR+RPLL A+ + G + + + AACALEMIHT SLIHDD
Sbjct: 28 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHDD 87
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEM 203
LP +D+D+ RR +P +H+VFGE+ A+LAGD LL+ A + + A +S ++ VR + E+
Sbjct: 88 LPCMDDDDLRRGQPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAEKKVRLVLEL 147
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+VAG+ D+ +EGK +++ ELEYIH HKT KLLE AV+ GA++ + E
Sbjct: 148 AKAAGPEGMVAGQVADMEAEGKRLTINELEYIHKHKTGKLLEFAVLAGAILSDATEEQEE 207
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++ +A+ IGL FQ+ DDILDV + EE+GK G D ++ K+TY L ++ AKS E
Sbjct: 208 KLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEEK 267
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A + ++ + + L + + IA R N
Sbjct: 268 IAKAKDSISSLQL-QDEYLLSICDLIAKRNN 297
>gi|228922933|ref|ZP_04086227.1| Geranyltranstransferase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|423582390|ref|ZP_17558501.1| hypothetical protein IIA_03905 [Bacillus cereus VD014]
gi|423634993|ref|ZP_17610646.1| hypothetical protein IK7_01402 [Bacillus cereus VD156]
gi|228836704|gb|EEM82051.1| Geranyltranstransferase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|401213269|gb|EJR20010.1| hypothetical protein IIA_03905 [Bacillus cereus VD014]
gi|401278979|gb|EJR84909.1| hypothetical protein IK7_01402 [Bacillus cereus VD156]
Length = 296
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 116/244 (47%), Positives = 164/244 (67%), Gaps = 1/244 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR+RPLL A+ + G + + + AACALEMIHT SL+HDD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + + A +S ++ VR + E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+V G+ D+ +EGK +++ ELEYIH HKT KLLE AV+ GA++ + E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++ +A+ IGL FQ+ DDILDV + EE+GK G DL++ K+TY L I+ AK E
Sbjct: 207 KLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDLSNEKSTYTTLFTIDRAKDILEET 266
Query: 324 LGQA 327
+ +A
Sbjct: 267 IAEA 270
>gi|229013396|ref|ZP_04170533.1| Geranyltranstransferase [Bacillus mycoides DSM 2048]
gi|423489365|ref|ZP_17466047.1| hypothetical protein IEU_03988 [Bacillus cereus BtB2-4]
gi|423495088|ref|ZP_17471732.1| hypothetical protein IEW_03986 [Bacillus cereus CER057]
gi|423498118|ref|ZP_17474735.1| hypothetical protein IEY_01345 [Bacillus cereus CER074]
gi|423598501|ref|ZP_17574501.1| hypothetical protein III_01303 [Bacillus cereus VD078]
gi|228747808|gb|EEL97674.1| Geranyltranstransferase [Bacillus mycoides DSM 2048]
gi|401151181|gb|EJQ58633.1| hypothetical protein IEW_03986 [Bacillus cereus CER057]
gi|401161405|gb|EJQ68772.1| hypothetical protein IEY_01345 [Bacillus cereus CER074]
gi|401236771|gb|EJR43228.1| hypothetical protein III_01303 [Bacillus cereus VD078]
gi|402431601|gb|EJV63665.1| hypothetical protein IEU_03988 [Bacillus cereus BtB2-4]
Length = 297
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 122/271 (45%), Positives = 176/271 (64%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR+RPLL A+ + G + + + AACALEMIHT SLIHDD
Sbjct: 28 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHDD 87
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + + A +S ++ VR + E+
Sbjct: 88 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 147
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+VAG+ D+ +EGK +++ ELEYIH HKT KLLE AV+ GA++ + E
Sbjct: 148 AKAAGPEGMVAGQVADMEAEGKRLTINELEYIHNHKTGKLLEFAVLAGAILSDATEEQEE 207
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++ +A+ IGL FQ+ DDILDV + EE+GK G D ++ K+TY L ++ AKS E
Sbjct: 208 KLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEEK 267
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A ++ + + L + + IA R N
Sbjct: 268 IAKAKASISSLQL-QDEYLLSICDLIAKRNN 297
>gi|394988076|ref|ZP_10380914.1| hypothetical protein SCD_00477 [Sulfuricella denitrificans skB26]
gi|393792534|dbj|GAB70553.1| hypothetical protein SCD_00477 [Sulfuricella denitrificans skB26]
Length = 296
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 119/293 (40%), Positives = 179/293 (61%), Gaps = 4/293 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F+ + + K +++ L + + P ++H+AMRY +L GGKR+RPLL A+ E+VG
Sbjct: 4 FQAWAVAKQQRMEDVLSDVLPQSSIAPQRLHQAMRYVVLGGGKRIRPLLAFAAGEVVGAG 63
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
AA A+E+IH SL+HDDLP +D+D RR KP H + E+TA+L GD+L +LA
Sbjct: 64 PQCVDAAAAAVELIHAYSLVHDDLPCMDDDSLRRGKPTCHHEYDEATALLVGDSLQTLAF 123
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
+ +A +P + + + A G G+ G+ +D S GK +SL ELE++H+HKT
Sbjct: 124 QVLADRPLADAPAVQLEMMKILAVAAGSRGMAGGQAIDGESVGKTLSLPELEFMHIHKTG 183
Query: 242 KLLEAAVVCGAVIGGG-NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
L+ A+V GA+ G G E+E + +YA+CIGL FQVVDD+LD ++ LGKTAGKD
Sbjct: 184 ALIRASVQLGALCGKGLENSEMEHLLHYAKCIGLAFQVVDDVLDAESNTATLGKTAGKDA 243
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
+ K TY ++G A++FA +L A++ L F A +A L +A++I RQ
Sbjct: 244 EANKPTYVSILGANAARAFAADLHRDALQSLEVFGA-RAERLRQIADFIVKRQ 295
>gi|384182008|ref|YP_005567770.1| geranyltranstransferase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|324328092|gb|ADY23352.1| geranyltranstransferase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 296
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 118/271 (43%), Positives = 177/271 (65%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR+RPLL A+ + G +++ + AACALEMIHT SL+HDD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLVHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + + A +S ++ VR + E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAEKKVRLVLEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+V G+ D+ +EGK +++ ELEYIH HKT KLLE AV+ G+++ + E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSNATEEQEE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++ +A+ IGL FQ+ DDILDV + EE+GK G D+++ K+TY L ++ AK E
Sbjct: 207 KLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILEET 266
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A + ++ + + L + + IA R N
Sbjct: 267 IAKAKDAISSLQL-QDEYLLSICDLIAKRNN 296
>gi|296122688|ref|YP_003630466.1| polyprenyl synthetase [Planctomyces limnophilus DSM 3776]
gi|296015028|gb|ADG68267.1| Polyprenyl synthetase [Planctomyces limnophilus DSM 3776]
Length = 318
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 130/308 (42%), Positives = 187/308 (60%), Gaps = 10/308 (3%)
Query: 54 STDIPLPTFPFEEYMIRKAEQVNKALDEAVVLQP------PVKIHKAMRYSLLAGGKRVR 107
+T++ F +++ +Q+ A+D A+ P P + ++MRYS L GGKR+R
Sbjct: 14 ATNLSSGAVEFTQHLRELQKQIEMAMDTALSATPDVTRFVPPSLFESMRYSALGGGKRLR 73
Query: 108 PLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGES 167
P+L + + E G D AMPAA ALEMIH SLIHDDLP +D+D+ RR +P +H V+GE+
Sbjct: 74 PVLVLLASEACGADPLQAMPAAVALEMIHCYSLIHDDLPAMDDDDLRRGRPTNHIVYGEA 133
Query: 168 TAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDV 227
TAILAGD LL+ A E +A I+ + + + +A++ SA G G+V G+ D+A+E V
Sbjct: 134 TAILAGDGLLTRAFEVLATEIS--NKELALACVADLASAAGWCGMVGGQAADLAAETTPV 191
Query: 228 -SLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVT 286
+L ELE IH KT +LL A+ G +GG + ++E + Y IGL FQ+ DD+LDV
Sbjct: 192 TTLAELEQIHHRKTGRLLACALTMGGRLGGASVQQLESLARYGFAIGLAFQIADDLLDVE 251
Query: 287 KSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLA 346
SSE+LGK KD +GKATYP +G+E ++ A +L+ QA EL F + L LA
Sbjct: 252 GSSEKLGKQTQKDAQAGKATYPGFLGVEASRERAADLVKQACRELEVF-GPRGQWLSDLA 310
Query: 347 NYIASRQN 354
YI R +
Sbjct: 311 LYIIERDH 318
>gi|42783297|ref|NP_980544.1| geranyltranstransferase [Bacillus cereus ATCC 10987]
gi|206976353|ref|ZP_03237261.1| geranyltranstransferase [Bacillus cereus H3081.97]
gi|217961668|ref|YP_002340238.1| geranyltranstransferase [Bacillus cereus AH187]
gi|229140912|ref|ZP_04269456.1| Geranyltranstransferase [Bacillus cereus BDRD-ST26]
gi|375286185|ref|YP_005106624.1| geranyltranstransferase [Bacillus cereus NC7401]
gi|402555688|ref|YP_006596959.1| geranyltranstransferase [Bacillus cereus FRI-35]
gi|423354675|ref|ZP_17332300.1| hypothetical protein IAU_02749 [Bacillus cereus IS075]
gi|423374004|ref|ZP_17351343.1| hypothetical protein IC5_03059 [Bacillus cereus AND1407]
gi|423566860|ref|ZP_17543107.1| hypothetical protein II7_00083 [Bacillus cereus MSX-A12]
gi|42739225|gb|AAS43152.1| geranyltranstransferase [Bacillus cereus ATCC 10987]
gi|206745549|gb|EDZ56948.1| geranyltranstransferase [Bacillus cereus H3081.97]
gi|217065600|gb|ACJ79850.1| geranyltranstransferase [Bacillus cereus AH187]
gi|228642488|gb|EEK98775.1| Geranyltranstransferase [Bacillus cereus BDRD-ST26]
gi|358354712|dbj|BAL19884.1| geranyltranstransferase [Bacillus cereus NC7401]
gi|401086223|gb|EJP94450.1| hypothetical protein IAU_02749 [Bacillus cereus IS075]
gi|401094819|gb|EJQ02889.1| hypothetical protein IC5_03059 [Bacillus cereus AND1407]
gi|401215375|gb|EJR22092.1| hypothetical protein II7_00083 [Bacillus cereus MSX-A12]
gi|401796898|gb|AFQ10757.1| geranyltranstransferase [Bacillus cereus FRI-35]
Length = 296
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 118/271 (43%), Positives = 177/271 (65%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR+RPLL A+ + G +++ + AACALEMIHT SL+HDD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLVHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + + A +S ++ VR + E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+V G+ D+ +EGK +++ ELEYIH HKT KLLE AV+ G+++ + E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSNATEEQEE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++ +A+ IGL FQ+ DDILDV + EE+GK G D+++ K+TY L ++ AK E
Sbjct: 207 KLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILEET 266
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A + ++ + + L + + IA R N
Sbjct: 267 IAKAKDAISSLQL-QDEYLLSICDLIAKRNN 296
>gi|389774289|ref|ZP_10192408.1| geranyltranstransferase [Rhodanobacter spathiphylli B39]
gi|388437888|gb|EIL94643.1| geranyltranstransferase [Rhodanobacter spathiphylli B39]
Length = 302
Score = 210 bits (534), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 121/296 (40%), Positives = 183/296 (61%), Gaps = 13/296 (4%)
Query: 63 PFEEYMIRKAEQVNKALDEAV--VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
P + +I++AEQ ALD + P ++H+AMRY++L+GGKR+RPLL A+ + +G
Sbjct: 12 PALQSLIQRAEQ---ALDRHLPSAGHSPAELHRAMRYAVLSGGKRLRPLLVYAAAQALGH 68
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
D + ACA+E+IH SL+HDDLP +D+D RR +P H VFGE+ AILAGDAL +LA
Sbjct: 69 DSATLDAPACAVELIHAYSLVHDDLPAMDDDALRRGRPTCHIVFGEAMAILAGDALQALA 128
Query: 181 LEHVAVNIA----GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIH 236
E +A + A + ++RA+ C G EG+ G+ +D+A+ G+ + L +LE++H
Sbjct: 129 FEILADDAARQVEAATGIAMLRALGRAC---GAEGMAGGQALDLAAVGRHLGLDQLEHMH 185
Query: 237 VHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTA 296
KT L+ A+V GA+ G + ++ + YA +GL FQV DDILDV S +GKTA
Sbjct: 186 ACKTGALIRASVQLGALAAGADDGMLQSLDRYAHAVGLAFQVRDDILDVEGESAVIGKTA 245
Query: 297 GKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
GKD A+ K T+P ++G++ +++ EL QA+ +A ++ L LA Y A R
Sbjct: 246 GKDAAADKPTFPSIIGLDASRARLAELTEQALAAIAPL-GTRGELLRELALYSALR 300
>gi|229111653|ref|ZP_04241203.1| Geranyltranstransferase [Bacillus cereus Rock1-15]
gi|423585339|ref|ZP_17561426.1| hypothetical protein IIE_00751 [Bacillus cereus VD045]
gi|228671788|gb|EEL27082.1| Geranyltranstransferase [Bacillus cereus Rock1-15]
gi|401233982|gb|EJR40468.1| hypothetical protein IIE_00751 [Bacillus cereus VD045]
Length = 296
Score = 210 bits (534), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 115/244 (47%), Positives = 165/244 (67%), Gaps = 1/244 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR+RPLL A+ + G + + + AACALEMIHT SL+HDD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + + A +S ++ VR + E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+V G+ D+ +EGK +++ ELEYIH HKT KLLE AV+ GA++ + E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++ +A+ IGL FQ+ DDILDV + EE+GK G DL++ K+TY L ++ AK+ E
Sbjct: 207 KLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDLSNEKSTYTTLFTVDRAKAILEET 266
Query: 324 LGQA 327
+ +A
Sbjct: 267 IAEA 270
>gi|302392484|ref|YP_003828304.1| farnesyl-diphosphate synthase [Acetohalobium arabaticum DSM 5501]
gi|302204561|gb|ADL13239.1| farnesyl-diphosphate synthase [Acetohalobium arabaticum DSM 5501]
Length = 295
Score = 210 bits (534), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 186/290 (64%), Gaps = 4/290 (1%)
Query: 66 EYMIRKAEQVNKALDEAVVLQ--PPVKIHKAMRYSLLAGGKRVRPLLC-IASCELVGGDE 122
++++ KAE VNKALD+ + + P K+H++MRYS L GGKR+RP+L I + L G +E
Sbjct: 5 DFLVAKAEAVNKALDDYLPAEDKKPAKLHQSMRYSTLMGGKRLRPVLTLIVANSLFGVEE 64
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
MPAA A+E++H SLIHDDLP +D+D+ RR + A+H+VFG++ A+L+GDALL+ A E
Sbjct: 65 ERIMPAAAAVELVHNYSLIHDDLPCMDDDDYRRGELANHKVFGDAIAVLSGDALLTYAFE 124
Query: 183 HVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAK 242
+ + +++++ E+ G G+V G+ D+ +EGK V +LE+IH +KT
Sbjct: 125 LLTKLEGDFTAEQILKVSKEVAQGAGFRGMVGGQAADMLAEGKAVEDIDLEFIHRYKTGA 184
Query: 243 LLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
LL+AAV GA++GG + E+ + YA IGL FQ++DDILD+ E+LGK G D
Sbjct: 185 LLQAAVRTGAILGGADKEELAALTIYAENIGLSFQIIDDILDIVGDEEKLGKEVGSDEGQ 244
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
KAT+P + G+E +++ A + + A E + FE A L LA+YI R
Sbjct: 245 DKATFPSVYGLEESRAMAQKKVQAAKEAIERFE-EDAELLIQLADYIIER 293
>gi|405354222|ref|ZP_11023602.1| Octaprenyl-diphosphate synthase [Chondromyces apiculatus DSM 436]
gi|397092465|gb|EJJ23223.1| Octaprenyl-diphosphate synthase [Myxococcus sp. (contaminant ex DSM
436)]
Length = 310
Score = 210 bits (534), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 122/281 (43%), Positives = 174/281 (61%), Gaps = 16/281 (5%)
Query: 75 VNKALDEAVVLQPPVK--IHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACAL 132
V +ALDE PP + A+R ++LA GKR+RP+LC+ +CE VGG A+PAACA+
Sbjct: 30 VTRALDEQF---PPGSGPLTAAIREAVLADGKRLRPILCLEACEWVGGSLKAALPAACAI 86
Query: 133 EMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVS 192
EMIH MSL+HDDLP +D+ E R +PA H+V GE+ AILAGDALL A +A +I V
Sbjct: 87 EMIHKMSLVHDDLPAMDDAETRNGRPALHKVHGEALAILAGDALLVHAFGLLA-SIRAVP 145
Query: 193 PDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGA 252
+RV+ AI+ +C A+G GL G+ +D+ S+ +DV+ ++L+++H KTA EAA+V GA
Sbjct: 146 AERVLGAISRLCQALGTAGLAGGQALDVLSQSEDVTPEKLDHVHTWKTASFFEAAMVIGA 205
Query: 253 VIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKAT-YPKLM 311
+GG +A +VE + Y + +G FQ+ DD+LD K LA G+AT Y +L
Sbjct: 206 EVGGADASQVEALARYGKLLGRAFQISDDLLDARDV---------KALAHGEATNYVQLH 256
Query: 312 GIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
G++ A+ ELL QA+ LA + L LA + R
Sbjct: 257 GVDGARRKLRELLDQAVSALASNKRGALPLLAGLAELVWER 297
>gi|95928787|ref|ZP_01311533.1| Twin-arginine translocation pathway signal [Desulfuromonas
acetoxidans DSM 684]
gi|95135132|gb|EAT16785.1| Twin-arginine translocation pathway signal [Desulfuromonas
acetoxidans DSM 684]
Length = 297
Score = 210 bits (534), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 130/300 (43%), Positives = 190/300 (63%), Gaps = 18/300 (6%)
Query: 64 FEEYMIRKAEQVNKALDEAV--VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
+ Y+ + ++V +AL + + Q P ++H+AM YS+ AGGKR+RP+L +A+CE VGGD
Sbjct: 3 LKNYLTSQRQRVEEALAQTLPPKQQHPTQLHEAMHYSVFAGGKRLRPILMMAACEAVGGD 62
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
+PAACA+EMIHT SLIHDDLP +D+D+ RR +P +H+VFGE+TAILAGDALL+ A
Sbjct: 63 IENVLPAACAMEMIHTYSLIHDDLPAMDDDDLRRGQPTNHKVFGEATAILAGDALLTEAF 122
Query: 182 -------EHVAVNIAGVSPDRVVRAIAEMC-SAMGVEGLVAGEFVDIASEGKDV-SLKEL 232
+ V +N DR R + ++ A G G+V G+ VD+ +EG + L +
Sbjct: 123 VVLSAPSDSVQIN------DRTRREVIQLLARAAGAAGMVGGQIVDMEAEGMEQPDLATV 176
Query: 233 EYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEEL 292
+YIH HKT L+ A++ GA++GG N + E + + + GL FQ+ DDILD+T E+L
Sbjct: 177 DYIHAHKTGALILASIRAGALLGGANTEQYEALSRFGKLAGLAFQIADDILDITGDQEQL 236
Query: 293 GKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
GK G D GKATYP ++G+ + A EL QA++ L A A PL +++YI +R
Sbjct: 237 GKDIGSDQERGKATYPAVLGLSESIRRATELHQQALKALEPL-ADAAEPLRQISHYIINR 295
>gi|319943220|ref|ZP_08017503.1| geranyltranstransferase [Lautropia mirabilis ATCC 51599]
gi|319743762|gb|EFV96166.1| geranyltranstransferase [Lautropia mirabilis ATCC 51599]
Length = 322
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 122/270 (45%), Positives = 164/270 (60%), Gaps = 6/270 (2%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPF 147
P ++H+AMRY++L GGKRVRPLL A+ ELVG D AACA+E+IH SL+HDD+P
Sbjct: 52 PDRLHEAMRYAVLGGGKRVRPLLVYAAGELVGADARVLDGAACAVELIHVYSLVHDDMPA 111
Query: 148 LDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPD--RVVRA--IAEM 203
+DND+ RR KP H +GE+ A+L GDAL +LA E + + P RV A +A +
Sbjct: 112 MDNDDMRRGKPTVHRQYGEAMAMLVGDALQALAFEVLVAPLVEADPQAARVPAATMVAVL 171
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEV- 262
A G G+ G+ +DI G +S +LE +H KT +L +V G + GG + ++
Sbjct: 172 ARAAGSWGMAGGQALDIEGVGLRLSRPQLEAMHRAKTGAMLSVSVELGLLAGGQPSADLA 231
Query: 263 ERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGE 322
E ++ Y R IGL FQVVDDILDVT S LGKTAGKD A K TY L+G+E A++ A +
Sbjct: 232 EAMQRYGRAIGLAFQVVDDILDVTADSATLGKTAGKDQAQDKPTYVSLLGLEGARALATD 291
Query: 323 LLGQAIEELAYFEASKAAPLYFLANYIASR 352
L QA L +A L LA++I R
Sbjct: 292 LHAQAHACLQAL-GPRADRLRMLADFIVER 320
>gi|423395520|ref|ZP_17372721.1| hypothetical protein ICU_01214 [Bacillus cereus BAG2X1-1]
gi|423406396|ref|ZP_17383545.1| hypothetical protein ICY_01081 [Bacillus cereus BAG2X1-3]
gi|401654931|gb|EJS72470.1| hypothetical protein ICU_01214 [Bacillus cereus BAG2X1-1]
gi|401660390|gb|EJS77872.1| hypothetical protein ICY_01081 [Bacillus cereus BAG2X1-3]
Length = 296
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/271 (44%), Positives = 178/271 (65%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR+RPLL A+ + G + + + AACALEMIHT SLIHDD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + + A + +S ++ VR + E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYDQKEISAEKKVRLVLEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+V G+ D+ +EGK +++ ELEYIH HKT KLLE AV+ GA++ + E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKHKTGKLLEYAVLAGAILSDATEEQEE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++ +A+ IGL FQ+ DDILDV + EE+GK G D+++ K+TY L ++ AK+ E
Sbjct: 207 QLLVFAKNIGLAFQIRDDILDVEGNEEEIGKPIGSDVSNEKSTYTTLFTVDRAKAILEET 266
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A + ++ + + L + + IA R N
Sbjct: 267 IAKAKDAISSLQL-QDEYLLSICDVIAKRNN 296
>gi|75763306|ref|ZP_00743052.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl
pyrophosphate synthetase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|206971164|ref|ZP_03232115.1| geranyltranstransferase [Bacillus cereus AH1134]
gi|218899342|ref|YP_002447753.1| geranyltranstransferase [Bacillus cereus G9842]
gi|228902696|ref|ZP_04066843.1| Geranyltranstransferase [Bacillus thuringiensis IBL 4222]
gi|228941339|ref|ZP_04103891.1| Geranyltranstransferase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228954464|ref|ZP_04116489.1| Geranyltranstransferase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228967219|ref|ZP_04128255.1| Geranyltranstransferase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228974271|ref|ZP_04134840.1| Geranyltranstransferase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228980864|ref|ZP_04141168.1| Geranyltranstransferase [Bacillus thuringiensis Bt407]
gi|229071685|ref|ZP_04204901.1| Geranyltranstransferase [Bacillus cereus F65185]
gi|229081437|ref|ZP_04213937.1| Geranyltranstransferase [Bacillus cereus Rock4-2]
gi|229180458|ref|ZP_04307800.1| Geranyltranstransferase [Bacillus cereus 172560W]
gi|365159033|ref|ZP_09355220.1| hypothetical protein HMPREF1014_00683 [Bacillus sp. 7_6_55CFAA_CT2]
gi|384188250|ref|YP_005574146.1| dimethylallyltransferase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|402564407|ref|YP_006607131.1| dimethylallyltransferase [Bacillus thuringiensis HD-771]
gi|410676567|ref|YP_006928938.1| farnesyl diphosphate synthase IspA [Bacillus thuringiensis Bt407]
gi|423358781|ref|ZP_17336284.1| hypothetical protein IC1_00761 [Bacillus cereus VD022]
gi|423385682|ref|ZP_17362938.1| hypothetical protein ICE_03428 [Bacillus cereus BAG1X1-2]
gi|423412017|ref|ZP_17389137.1| hypothetical protein IE1_01321 [Bacillus cereus BAG3O-2]
gi|423426314|ref|ZP_17403345.1| hypothetical protein IE5_04003 [Bacillus cereus BAG3X2-2]
gi|423432198|ref|ZP_17409202.1| hypothetical protein IE7_04014 [Bacillus cereus BAG4O-1]
gi|423437632|ref|ZP_17414613.1| hypothetical protein IE9_03813 [Bacillus cereus BAG4X12-1]
gi|423503133|ref|ZP_17479725.1| hypothetical protein IG1_00699 [Bacillus cereus HD73]
gi|423527962|ref|ZP_17504407.1| hypothetical protein IGE_01514 [Bacillus cereus HuB1-1]
gi|423561345|ref|ZP_17537621.1| hypothetical protein II5_00749 [Bacillus cereus MSX-A1]
gi|434377303|ref|YP_006611947.1| dimethylallyltransferase [Bacillus thuringiensis HD-789]
gi|449091138|ref|YP_007423579.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl
pyrophosphate synthetase [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|452200639|ref|YP_007480720.1| (2E,6E)-farnesyl diphosphate synthase [Bacillus thuringiensis
serovar thuringiensis str. IS5056]
gi|74489206|gb|EAO52676.1| Dimethylallyltransferase / Geranyltranstransferase /
Geranylgeranyl pyrophosphate synthetase [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|206733936|gb|EDZ51107.1| geranyltranstransferase [Bacillus cereus AH1134]
gi|218540759|gb|ACK93153.1| geranyltranstransferase [Bacillus cereus G9842]
gi|228602882|gb|EEK60361.1| Geranyltranstransferase [Bacillus cereus 172560W]
gi|228701852|gb|EEL54338.1| Geranyltranstransferase [Bacillus cereus Rock4-2]
gi|228711416|gb|EEL63375.1| Geranyltranstransferase [Bacillus cereus F65185]
gi|228778800|gb|EEM27063.1| Geranyltranstransferase [Bacillus thuringiensis Bt407]
gi|228785321|gb|EEM33331.1| Geranyltranstransferase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228792588|gb|EEM40154.1| Geranyltranstransferase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228805121|gb|EEM51715.1| Geranyltranstransferase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228818265|gb|EEM64338.1| Geranyltranstransferase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228856883|gb|EEN01396.1| Geranyltranstransferase [Bacillus thuringiensis IBL 4222]
gi|326941959|gb|AEA17855.1| dimethylallyltransferase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|363626022|gb|EHL77031.1| hypothetical protein HMPREF1014_00683 [Bacillus sp. 7_6_55CFAA_CT2]
gi|401084653|gb|EJP92899.1| hypothetical protein IC1_00761 [Bacillus cereus VD022]
gi|401104085|gb|EJQ12062.1| hypothetical protein IE1_01321 [Bacillus cereus BAG3O-2]
gi|401111061|gb|EJQ18960.1| hypothetical protein IE5_04003 [Bacillus cereus BAG3X2-2]
gi|401116954|gb|EJQ24792.1| hypothetical protein IE7_04014 [Bacillus cereus BAG4O-1]
gi|401120787|gb|EJQ28583.1| hypothetical protein IE9_03813 [Bacillus cereus BAG4X12-1]
gi|401201602|gb|EJR08467.1| hypothetical protein II5_00749 [Bacillus cereus MSX-A1]
gi|401635738|gb|EJS53493.1| hypothetical protein ICE_03428 [Bacillus cereus BAG1X1-2]
gi|401793059|gb|AFQ19098.1| dimethylallyltransferase [Bacillus thuringiensis HD-771]
gi|401875860|gb|AFQ28027.1| dimethylallyltransferase [Bacillus thuringiensis HD-789]
gi|402451625|gb|EJV83444.1| hypothetical protein IGE_01514 [Bacillus cereus HuB1-1]
gi|402459354|gb|EJV91091.1| hypothetical protein IG1_00699 [Bacillus cereus HD73]
gi|409175696|gb|AFV20001.1| farnesyl diphosphate synthase IspA [Bacillus thuringiensis Bt407]
gi|449024895|gb|AGE80058.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl
pyrophosphate synthetase [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|452106032|gb|AGG02972.1| (2E,6E)-farnesyl diphosphate synthase [Bacillus thuringiensis
serovar thuringiensis str. IS5056]
Length = 296
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 115/244 (47%), Positives = 164/244 (67%), Gaps = 1/244 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR+RPLL A+ + G + + + AACALEMIHT SL+HDD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + + A +S ++ VR + E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+V G+ D+ +EGK +++ ELEYIH HKT KLLE AV+ GA++ + E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++ +A+ IGL FQ+ DDILDV + EE+GK G DL++ K+TY L ++ AK E
Sbjct: 207 KLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDLSNEKSTYTTLFTVDRAKDILEET 266
Query: 324 LGQA 327
+ +A
Sbjct: 267 IAEA 270
>gi|344337348|ref|ZP_08768282.1| Geranyltranstransferase [Thiocapsa marina 5811]
gi|343802301|gb|EGV20241.1| Geranyltranstransferase [Thiocapsa marina 5811]
Length = 297
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/296 (42%), Positives = 186/296 (62%), Gaps = 9/296 (3%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQP----PVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
+++ R +V LD +L P PV++H+AMRY++L GGKR+RPLL A+ E +G
Sbjct: 6 LDDFRARCRARVEATLD--ALLPPASVQPVRLHEAMRYTVLGGGKRIRPLLAYAAGEALG 63
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
D ACA+E+IH SLIHDDLP +D+D+ RR +P H F E+TAILAGDAL +L
Sbjct: 64 VDPVLLDRPACAVELIHAYSLIHDDLPAMDDDDLRRGRPTCHRAFDEATAILAGDALQTL 123
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A + +A + G+ ++ + +A + A G G+V G+ +D+A+EG + + LE+IH+HK
Sbjct: 124 AFQALAES-PGLDAEKRIAMVASLARASGARGMVGGQALDLAAEGSVLDVAMLEHIHIHK 182
Query: 240 TAKLLEAAVVCGAVIGGG-NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
T L+ AAV G + + ER+ YA+CIGL FQ+ DD+LDV ++ +GKTAG+
Sbjct: 183 TGALIRAAVQMGILAHDAPDPDHAERLDRYAKCIGLAFQIQDDVLDVEGDTDLIGKTAGR 242
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
D KATYP L+G+ AK A L+G A+E + F +S A PL ++A + R++
Sbjct: 243 DQVLEKATYPALVGLPEAKEMAAALIGDALESIGVF-SSGADPLRWIAGALIGRKH 297
>gi|229198305|ref|ZP_04325012.1| Geranyltranstransferase [Bacillus cereus m1293]
gi|423574135|ref|ZP_17550254.1| hypothetical protein II9_01356 [Bacillus cereus MSX-D12]
gi|423604168|ref|ZP_17580061.1| hypothetical protein IIK_00749 [Bacillus cereus VD102]
gi|228585184|gb|EEK43295.1| Geranyltranstransferase [Bacillus cereus m1293]
gi|401212704|gb|EJR19447.1| hypothetical protein II9_01356 [Bacillus cereus MSX-D12]
gi|401245854|gb|EJR52207.1| hypothetical protein IIK_00749 [Bacillus cereus VD102]
Length = 296
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 118/271 (43%), Positives = 177/271 (65%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR+RPLL A+ + G +++ + AACALEMIHT SL+HDD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLVHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + + A +S ++ VR + E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+V G+ D+ +EGK +++ ELEYIH HKT KLLE AV+ G+++ + E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++ +A+ IGL FQ+ DDILDV + EE+GK G D+++ K+TY L ++ AK E
Sbjct: 207 KLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILEET 266
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A + ++ + + L + + IA R N
Sbjct: 267 IAKAKDAISSLQL-QDEYLLSICDLIAKRNN 296
>gi|334137118|ref|ZP_08510563.1| geranyltranstransferase [Paenibacillus sp. HGF7]
gi|333605316|gb|EGL16685.1| geranyltranstransferase [Paenibacillus sp. HGF7]
Length = 300
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/292 (40%), Positives = 171/292 (58%), Gaps = 3/292 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAV--VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
+EY+ A++V L E + P + ++ +YS+ AGGKR+RP+L +A+ E +GG
Sbjct: 7 IQEYIASYAKEVEGELRELFPRLWDIPDVLRQSAQYSIDAGGKRLRPILVLAAAEALGGR 66
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
+ AMP ACA+EM+HT SLIHDDLP +DND+ RR K +H+V+GE+ AILAGDALL+ A
Sbjct: 67 KEAAMPVACAIEMVHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEAMAILAGDALLTQAF 126
Query: 182 EHVA-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKT 240
+ GV ++V+ + E+ G G+V G+ D+ E L LEYIH HKT
Sbjct: 127 YSASQARRHGVPAEQVLNIVEELAEYSGARGMVGGQVADMKGEQGITELSGLEYIHQHKT 186
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
+ L+ ++ G I G + ++E + + R IGL FQ+ DDILDVT + E+LGK G D
Sbjct: 187 SDLIIFSLRAGGRIAGADDKQLEALTAFGRSIGLAFQIQDDILDVTGTQEKLGKAVGSDE 246
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
K TYP +G+E ++ L +A +A K L LA+Y+ R
Sbjct: 247 KQQKVTYPFFIGMEESERRVALLTDEAKTAIAGGVLPKPQRLLELADYLMKR 298
>gi|337288952|ref|YP_004628424.1| Farnesyltranstransferase [Thermodesulfobacterium sp. OPB45]
gi|334902690|gb|AEH23496.1| Farnesyltranstransferase [Thermodesulfobacterium geofontis OPF15]
Length = 301
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 121/295 (41%), Positives = 184/295 (62%), Gaps = 5/295 (1%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPV--KIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
F E Y+ + ++V + L++ + ++ A +YSL AGGKR+RP+LC+ASCE+VG
Sbjct: 6 FNLESYLKERGKKVEEILEKYFPKEEGYGKRVISAGKYSLFAGGKRIRPILCLASCEVVG 65
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
GD + A +E IHT SLIHDDLP +D+D+ RR KP+ H+ F E+TAILAGD L +L
Sbjct: 66 GDWRKILLFAAGIECIHTYSLIHDDLPCMDDDDFRRGKPSCHKAFDEATAILAGDGLQAL 125
Query: 180 ALEHVAVN--IAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHV 237
A + + V ++++AI + A+G EG+V G+ VD+ EGK + + L++IH+
Sbjct: 126 AFQFFTHPDLVRNVKKTKLLKAIYIISKAIGFEGMVGGQMVDLLMEGKKGNPRILKWIHL 185
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
+KT +L+EA+V+ GA++GG A E++ + +Y + +G FQ+VDD+LD+ ++LGK
Sbjct: 186 NKTVRLIEASVLSGAILGGAKAKELKALSSYGKNLGFAFQIVDDLLDILGDEKKLGKKTF 245
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
D+ K TYP L GIE K A +AI L FE S A PL +A ++ R
Sbjct: 246 SDVKKQKLTYPSLFGIEKTKELAKRYTEKAISALQPFEKS-ALPLKAIAEFVLYR 299
>gi|218235767|ref|YP_002368981.1| geranyltranstransferase [Bacillus cereus B4264]
gi|229129458|ref|ZP_04258429.1| Geranyltranstransferase [Bacillus cereus BDRD-Cer4]
gi|229146753|ref|ZP_04275118.1| Geranyltranstransferase [Bacillus cereus BDRD-ST24]
gi|229152380|ref|ZP_04280572.1| Geranyltranstransferase [Bacillus cereus m1550]
gi|296504667|ref|YP_003666367.1| dimethylallyltransferase [Bacillus thuringiensis BMB171]
gi|423640739|ref|ZP_17616357.1| hypothetical protein IK9_00684 [Bacillus cereus VD166]
gi|423650045|ref|ZP_17625615.1| hypothetical protein IKA_03832 [Bacillus cereus VD169]
gi|423657123|ref|ZP_17632422.1| hypothetical protein IKG_04111 [Bacillus cereus VD200]
gi|218163724|gb|ACK63716.1| geranyltranstransferase [Bacillus cereus B4264]
gi|228630988|gb|EEK87625.1| Geranyltranstransferase [Bacillus cereus m1550]
gi|228636581|gb|EEK93046.1| Geranyltranstransferase [Bacillus cereus BDRD-ST24]
gi|228654063|gb|EEL09930.1| Geranyltranstransferase [Bacillus cereus BDRD-Cer4]
gi|296325719|gb|ADH08647.1| dimethylallyltransferase [Bacillus thuringiensis BMB171]
gi|401279800|gb|EJR85722.1| hypothetical protein IK9_00684 [Bacillus cereus VD166]
gi|401282463|gb|EJR88362.1| hypothetical protein IKA_03832 [Bacillus cereus VD169]
gi|401289866|gb|EJR95570.1| hypothetical protein IKG_04111 [Bacillus cereus VD200]
Length = 296
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/271 (44%), Positives = 175/271 (64%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR+RPLL A+ + G + + + AACALEMIHT SL+HDD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + + A +S ++ VR + E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+V G+ D+ +EGK +++ ELEYIH HKT KLLE AV+ GA++ + E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++ +A+ IGL FQ+ DDILDV + EE+GK G DL++ K+TY L ++ AK E
Sbjct: 207 KLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDLSNEKSTYTTLFTVDRAKDILEET 266
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A ++ + + L + + IA R N
Sbjct: 267 IAEAKGAISSLQL-QDEYLLSICDLIAKRNN 296
>gi|452852192|ref|YP_007493876.1| Polyprenyl synthetase [Desulfovibrio piezophilus]
gi|451895846|emb|CCH48725.1| Polyprenyl synthetase [Desulfovibrio piezophilus]
Length = 299
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 121/270 (44%), Positives = 172/270 (63%), Gaps = 5/270 (1%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE--SWAMPAACALEMIHTMSLIHDDL 145
P ++H +M YSLLAGGKR+RP+L ++ +++G MP A +LE IHT SLIHDDL
Sbjct: 28 PARLHASMEYSLLAGGKRLRPVLTLSWAQMLGEATITDAVMPFAASLECIHTYSLIHDDL 87
Query: 146 PFLDNDERRRSKPASHEVFGESTAILAGDALLS--LALEHVAVNIAGVSPDRVVRAIAEM 203
P +D+D+ RR KP++H+ F E+TAILAGD LL+ L A + G+ DRV+RAIA +
Sbjct: 88 PAMDDDDLRRGKPSNHKKFDEATAILAGDGLLTEAFGLMSTASIVKGLPADRVLRAIAVL 147
Query: 204 CSAMGVEGLVAGEFVDIA-SEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEV 262
A G G+V G+ VD+ + G V+L++L +H KT L+ AA CGA++ G ++
Sbjct: 148 AHAAGASGMVGGQAVDMELTGGTSVALEQLRIMHAMKTGALITAACECGAILSGSTEADI 207
Query: 263 ERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGE 322
E R Y + IG+ FQ+VDDILDV +E LGK AG D A GK+TYP L+G++ +K+ A
Sbjct: 208 ENAREYGQAIGVAFQIVDDILDVVSDTETLGKPAGSDEAMGKSTYPALIGLDKSKALARR 267
Query: 323 LLGQAIEELAYFEASKAAPLYFLANYIASR 352
+ A+E L + ++ L LA YI R
Sbjct: 268 HVDSALERLTTYAGAEHQFLADLARYIVDR 297
>gi|229047874|ref|ZP_04193450.1| Geranyltranstransferase [Bacillus cereus AH676]
gi|228723331|gb|EEL74700.1| Geranyltranstransferase [Bacillus cereus AH676]
Length = 296
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 115/244 (47%), Positives = 164/244 (67%), Gaps = 1/244 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR+RPLL A+ + G + + + AACALEMIHT SL+HDD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + + A +S ++ VR + E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+V G+ D+ +EGK +++ ELEYIH HKT KLLE AV+ GA++ + E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++ +A+ IGL FQ+ DDILDV + EE+GK G DL++ K+TY L ++ AK E
Sbjct: 207 KLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDLSNEKSTYTTLFTVDRAKEILEET 266
Query: 324 LGQA 327
+ +A
Sbjct: 267 IAEA 270
>gi|402298061|ref|ZP_10817785.1| geranyltranstransferase [Bacillus alcalophilus ATCC 27647]
gi|401726705|gb|EJS99921.1| geranyltranstransferase [Bacillus alcalophilus ATCC 27647]
Length = 293
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 124/272 (45%), Positives = 177/272 (65%), Gaps = 7/272 (2%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW--AMPAACALEMIHTMSLIH 142
L P + AM YSL AGGKR+RPLL +A+ L G D+S+ ACA+EMIHT SLIH
Sbjct: 27 LNAPASLKDAMIYSLEAGGKRIRPLLLLAT--LKGFDKSFETGYELACAIEMIHTYSLIH 84
Query: 143 DDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAE 202
DDLP +D+D+ RR KP +H+VFGE+TAILAGDALL+ + E +A + ++P++VVR I E
Sbjct: 85 DDLPAMDDDDLRRGKPTNHKVFGEATAILAGDALLTHSFERIAS--SQLAPEKVVRLIKE 142
Query: 203 MCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEV 262
+ A G G++ G+ D+ E + ++L+EL YIH HKT LL ++V GA+I + +V
Sbjct: 143 LAIAAGPVGMIGGQVADMEGEERALTLEELTYIHNHKTGDLLTYSIVAGAIIADASEEDV 202
Query: 263 ERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGE 322
ER+R++AR +GLLFQ+ DD+LDV E +GK G D+ + K+TYP L+G+ K
Sbjct: 203 ERLRHFARELGLLFQIKDDLLDVEGEQELIGKPLGSDVGNNKSTYPSLLGLNETKEVLNA 262
Query: 323 LLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A+E L + + L LA+YI +R +
Sbjct: 263 HYDVALESL-HKVSMNTNLLESLADYIKNRNH 293
>gi|228960446|ref|ZP_04122097.1| Geranyltranstransferase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|423630903|ref|ZP_17606650.1| hypothetical protein IK5_03753 [Bacillus cereus VD154]
gi|228799210|gb|EEM46176.1| Geranyltranstransferase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|401264270|gb|EJR70382.1| hypothetical protein IK5_03753 [Bacillus cereus VD154]
Length = 296
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/271 (44%), Positives = 175/271 (64%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR+RPLL A+ + G + + + AACALEMIHT SL+HDD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + + A +S ++ VR + E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+V G+ D+ +EGK +++ ELEYIH HKT KLLE AV+ GA++ + E
Sbjct: 147 AKAAGPEGMVGGQVADMDAEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++ +A+ IGL FQ+ DDILDV + EE+GK G DL++ K+TY L ++ AK E
Sbjct: 207 KLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDLSNEKSTYTTLFTVDRAKDILEET 266
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A ++ + + L + + IA R N
Sbjct: 267 IAEAKGAISSLQL-QDEYLLSICDLIAKRNN 296
>gi|47569437|ref|ZP_00240118.1| geranyltranstransferase [Bacillus cereus G9241]
gi|228987369|ref|ZP_04147489.1| Geranyltranstransferase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229157777|ref|ZP_04285852.1| Geranyltranstransferase [Bacillus cereus ATCC 4342]
gi|47553852|gb|EAL12222.1| geranyltranstransferase [Bacillus cereus G9241]
gi|228625734|gb|EEK82486.1| Geranyltranstransferase [Bacillus cereus ATCC 4342]
gi|228772341|gb|EEM20787.1| Geranyltranstransferase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 296
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 118/271 (43%), Positives = 176/271 (64%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR+RPLL A+ + G +++ + AACALEMIHT SL+HDD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLVHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + + A +S ++ VR + E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+V G+ D+ +EGK +++ ELEYIH HKT KLLE AV+ G+++ + E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++ +A+ IGL FQ+ DDILDV + EE+GK G D+++ K+TY L ++ AK E
Sbjct: 207 KLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILEET 266
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A + + + + L + + IA R N
Sbjct: 267 IAKAKDAIGSLQL-QDEYLLSICDLIAKRNN 296
>gi|395760864|ref|ZP_10441533.1| geranyltranstransferase [Janthinobacterium lividum PAMC 25724]
Length = 294
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 121/267 (45%), Positives = 164/267 (61%), Gaps = 3/267 (1%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPF 147
P K+H AMRY+LL GGKRVRPLL +A+ EL D+ AACALEMIH SL+HDD+P
Sbjct: 29 PHKLHAAMRYALLGGGKRVRPLLVMAAGELFDADQDTLARAACALEMIHVYSLVHDDMPC 88
Query: 148 LDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAM 207
+D+D RR KP H + E+TA+L GDAL S A + V+ + P R + + + A
Sbjct: 89 MDDDALRRGKPTVHIAYDEATALLVGDALQSQAF-MLLVDGTAIPPARQMAMLKLLAHAS 147
Query: 208 GVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGG-NAIEVERVR 266
G G+ G+ +D+ S G ++L +LE +H KT LL AAV+ GA+ G + EV +
Sbjct: 148 GSFGMCGGQAIDLDSVGLALTLPQLEQMHQLKTGALLRAAVMLGALAGKDLTSDEVTALN 207
Query: 267 NYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQ 326
YAR +GL FQVVDD+LD T S LGKTAGKD A+ K TY ++G+E +++ A +L
Sbjct: 208 AYARAVGLAFQVVDDVLDATADSATLGKTAGKDAAANKPTYVSILGLEPSRALAEKLRCD 267
Query: 327 AIEELAYFEASKAAPLYFLANYIASRQ 353
A LA F KA L LA+ + R+
Sbjct: 268 AHAALAPF-GDKARRLRELADLVVQRK 293
>gi|422651839|ref|ZP_16714630.1| geranyltranstransferase [Pseudomonas syringae pv. actinidiae str.
M302091]
gi|330964913|gb|EGH65173.1| geranyltranstransferase [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 295
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 127/294 (43%), Positives = 187/294 (63%), Gaps = 9/294 (3%)
Query: 67 YMIRKAEQVNKALDEAVVLQPPV----KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
Y + +VN AL+ + QPP ++++AMRYS++ GGKRVRPLL A+CE +GG
Sbjct: 5 YQAQSQTRVNAALEG--LFQPPSPELSRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 63 EDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFT 122
Query: 183 H-VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
+A +++ + ++ ++ + +A G G+V G+ +D+ S G + LEY+H HKT
Sbjct: 123 ALLAPHLSSRDAETRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTG 182
Query: 242 KLLEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
L+EA+V GA+ G + ++ ++ YAR +GL FQV DDILDV + LGK G D+
Sbjct: 183 ALIEASVRLGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESDTATLGKRQGADI 242
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A K TYP L+G++ AK +A EL QA+ L+ F+A+ A PL LA YI R++
Sbjct: 243 ARDKPTYPALLGLDAAKGYALELRDQALAALSLFDAA-AEPLRELARYIVERRH 295
>gi|325983215|ref|YP_004295617.1| Geranyltranstransferase [Nitrosomonas sp. AL212]
gi|325532734|gb|ADZ27455.1| Geranyltranstransferase [Nitrosomonas sp. AL212]
Length = 297
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 114/267 (42%), Positives = 165/267 (61%), Gaps = 2/267 (0%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPF 147
P ++HKAMRYS+L GGKRVRPLL A+ ELV D A A+E+IH SL+HDDLP
Sbjct: 31 PERLHKAMRYSVLGGGKRVRPLLSFAAGELVAADLERVTVVAAAVELIHAYSLVHDDLPC 90
Query: 148 LDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAM 207
+D+D RR KP H + E+TA+L GD+L +LA E +A P+ ++ IA++ A
Sbjct: 91 MDDDILRRGKPTCHVEYDEATALLTGDSLQTLAFELLAEKPLADIPETQLQMIAQLALAS 150
Query: 208 GVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGG-NAIEVERVR 266
G G+ G+ D+ S GK +SL ELE++H+HKT L+ AAV+ GA N ++ ++
Sbjct: 151 GSRGMAGGQAFDLDSVGKMLSLPELEFMHIHKTGALIRAAVMLGARCSSCLNDEQLAQLD 210
Query: 267 NYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQ 326
++A+C+GL FQVVDD+LD ++ LGKTAGKD K TY ++G+ A+ A +L
Sbjct: 211 HFAKCVGLAFQVVDDLLDTEATTATLGKTAGKDAEHNKPTYVSILGVSQARELAEKLQHD 270
Query: 327 AIEELAYFEASKAAPLYFLANYIASRQ 353
A + L F + A L + ++I R+
Sbjct: 271 AYQALDGFNEA-ALRLRQVTDFIIKRK 296
>gi|388567037|ref|ZP_10153476.1| farnesyl-diphosphate synthase [Hydrogenophaga sp. PBC]
gi|388265742|gb|EIK91293.1| farnesyl-diphosphate synthase [Hydrogenophaga sp. PBC]
Length = 327
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 123/291 (42%), Positives = 171/291 (58%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
F ++ + V +AL V P + AMRY++L GGKR+RPLL +A+CE VGG
Sbjct: 37 FVQWRAVQQAAVEQALSRWVPSDAPAGLGDAMRYAVLDGGKRLRPLLVLATCEAVGGQAD 96
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
AM AAC++E+IH SL+HDD+P +DND RR KP H FGE+ A+LAGDAL +LA E
Sbjct: 97 AAMRAACSVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVKFGEAQALLAGDALQALAFEL 156
Query: 184 VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
+ ++ R + A G +G+ G+ VD+AS G + L LE +H KT L
Sbjct: 157 LVPGDGSLADAMSARLCRLLALAAGADGMAGGQAVDLASVGIALDLAALEAMHRRKTGAL 216
Query: 244 LEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASG 303
L+A+V GA G + + Y C+GL FQVVDDILDVT S LGKTAGKD A+
Sbjct: 217 LQASVTMGAATGVVARDTLAALTEYGACVGLAFQVVDDILDVTADSSTLGKTAGKDAAAD 276
Query: 304 KATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K T+ LMG+ A+++A +L +A L + L+ LA+++A R +
Sbjct: 277 KPTFVSLMGLGPAQAYADNVLARAHAALGRSGLERPGTLHALADWVAQRAS 327
>gi|296327940|ref|ZP_06870475.1| geranyltranstransferase [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
gi|296154896|gb|EFG95678.1| geranyltranstransferase [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
Length = 297
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/296 (39%), Positives = 174/296 (58%), Gaps = 9/296 (3%)
Query: 64 FEEYMIRKAE----QVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
F+ Y+ K + ++ K L E L P I K M Y++L GGKR+RP L A+ EL+
Sbjct: 4 FQVYLKEKTDFFETELKKELKE---LSYPETIAKGMEYAILNGGKRLRPFLLFATLELLN 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
+ + +A ALEMIH+ SL+HDDLP LDND+ RR K +H+VFGE+ IL GD+LL+
Sbjct: 61 QNIEKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTY 120
Query: 180 ALEHVAV-NIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
A ++ N+ +S ++V I++ G++G++ G+ +DI SE K + L+ L+YIH H
Sbjct: 121 AFYVLSQKNLELLSSKQIVNIISKTSEYAGIDGMIGGQMIDIQSENKKIDLETLKYIHSH 180
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT KL++ + +I + E + YA IGL FQV DDILDV + E+LGK G
Sbjct: 181 KTGKLIKLPIEIACIIANLEKDKREVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGS 240
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELA-YFEASKAAPLYFLANYIASRQ 353
D+ KATYP ++G+E +K + +A E + F K L LA++I R+
Sbjct: 241 DVDLHKATYPSILGMEESKKILNNTVEKAKEIIKNKFGEEKGKVLISLADFIKDRK 296
>gi|421145508|ref|ZP_15605374.1| dimethylallyltransferase [Fusobacterium nucleatum subsp. fusiforme
ATCC 51190]
gi|395488094|gb|EJG08983.1| dimethylallyltransferase [Fusobacterium nucleatum subsp. fusiforme
ATCC 51190]
Length = 297
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 116/296 (39%), Positives = 173/296 (58%), Gaps = 9/296 (3%)
Query: 64 FEEYMIRKAE----QVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
F+ Y+ K + ++ K L E L P I K M Y++L GGKR+RP L + EL+
Sbjct: 4 FQVYLKEKTDFFETELKKELKE---LSYPETITKGMEYAILNGGKRLRPFLLFVTLELLN 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
GD + +A ALEMIH+ SL+HDDLP LDND+ RR K +H+VFGE+ IL GD+LL+
Sbjct: 61 GDIKKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTY 120
Query: 180 ALEHVAV-NIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
A ++ N+ +S +++V I++ G+ G++ G+ +DI SE K + L+ L+YIH H
Sbjct: 121 AFYVLSQKNLELLSSEQIVNIISKTSEYAGINGMIGGQMIDIESENKKIDLETLKYIHSH 180
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT KL++ + +I + E + YA IGL FQV DDILDV + E+LGK G
Sbjct: 181 KTGKLIKLPIEIACIIANLEKDKREILEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGS 240
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELA-YFEASKAAPLYFLANYIASRQ 353
D+ KATYP ++G++ +K + + +A E + F L LA++I R
Sbjct: 241 DVDLHKATYPSILGMKESKKILNDTVEKAKEIIKNKFGEKTGKILISLADFIKDRN 296
>gi|392419665|ref|YP_006456269.1| geranyltranstransferase [Pseudomonas stutzeri CCUG 29243]
gi|390981853|gb|AFM31846.1| geranyltranstransferase [Pseudomonas stutzeri CCUG 29243]
Length = 295
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/297 (44%), Positives = 185/297 (62%), Gaps = 13/297 (4%)
Query: 66 EYMIRKAEQVNKALDEAVVLQPPV----KIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
+Y R ++V+ L+ V PP+ ++++AMRYS++ GGKRVRPLL A+CE + GD
Sbjct: 4 DYQKRCQQRVDGCLETLFV--PPLPQLERLYQAMRYSVMNGGKRVRPLLVYAACEALNGD 61
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
++ A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 62 KTSADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 182 EHVAVNIAGVSPDRV---VRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
E A+ A +P +R A + A G G+V G+ +D+ S G + LE +H H
Sbjct: 122 E--AMAQAAHNPQDATLRLRMFAVLARAAGPAGMVGGQAIDLGSVGLKLDRDALELMHRH 179
Query: 239 KTAKLLEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
KT L+EA+V GA+ G +A + + YAR IGL FQV DDILDV + LGK G
Sbjct: 180 KTGALIEASVQLGALASGHADADNLASLSQYARAIGLAFQVQDDILDVESDTATLGKHQG 239
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
D+A K TYP L+G++ AK++A EL QA+ L F+ S A PL LA YI R+N
Sbjct: 240 ADIARDKPTYPALLGMDAAKAYALELRDQALHALRPFDIS-AEPLRELARYIVERRN 295
>gi|256828745|ref|YP_003157473.1| polyprenyl synthetase [Desulfomicrobium baculatum DSM 4028]
gi|256577921|gb|ACU89057.1| Polyprenyl synthetase [Desulfomicrobium baculatum DSM 4028]
Length = 295
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/269 (44%), Positives = 171/269 (63%), Gaps = 2/269 (0%)
Query: 86 QPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDL 145
+ P + +M YSL+AGGKR+RP+LC+A EL GG + ACA+E IHT SLIHDDL
Sbjct: 29 RSPSPLVASMEYSLMAGGKRLRPVLCLAWAELAGGSVHAVLDFACAIECIHTYSLIHDDL 88
Query: 146 PFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCS 205
P +D+D+ RR KP++H+ F E+TAILAGD LL+ A +A ++ + P+R+++A+ + +
Sbjct: 89 PAMDDDDLRRGKPSNHKRFDEATAILAGDGLLTEAFT-LASSLE-LRPERILKAVFHLST 146
Query: 206 AMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERV 265
A G G+V G+ +D+ GK SL +L +H KT L+E + V G V+GGG+ E +
Sbjct: 147 AAGPRGMVGGQVLDMGLTGKSASLPQLREMHAKKTGALIETSCVTGCVLGGGDDSEQAKA 206
Query: 266 RNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLG 325
Y R IGL FQV DDILDV LGK G D+A GK+TYP L+GI+ ++ A + +
Sbjct: 207 SEYGRAIGLAFQVTDDILDVIGDEAALGKPVGSDVAQGKSTYPALLGIDQSRVLARQSVD 266
Query: 326 QAIEELAYFEASKAAPLYFLANYIASRQN 354
QA+ LA F +A L +A YI R +
Sbjct: 267 QALAALAGFSHPRADFLRAVALYILDRTH 295
>gi|322434675|ref|YP_004216887.1| polyprenyl synthetase [Granulicella tundricola MP5ACTX9]
gi|321162402|gb|ADW68107.1| Polyprenyl synthetase [Granulicella tundricola MP5ACTX9]
Length = 320
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 129/316 (40%), Positives = 186/316 (58%), Gaps = 30/316 (9%)
Query: 66 EYMIRKAEQVNKALDEAVVLQP---PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD- 121
+++++ + A E ++ P P IH+AMR+S AGGKR+RP+L + + +V G
Sbjct: 8 KHLLKAGATLTDAALERLLPAPDTLPHSIHRAMRHSTFAGGKRLRPILALEAARMVSGGT 67
Query: 122 -----ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDAL 176
E+ A ALEMIHT SLIHDDLP LDND+ RR +P H VFGE+TAILAGDAL
Sbjct: 68 LTPALETAAAELGAALEMIHTYSLIHDDLPALDNDDLRRGQPTCHVVFGEATAILAGDAL 127
Query: 177 LSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGV-------------EGLVAGEFVDIASE 223
+LA + +A N+ + VV + E+ +A+ G++ G+ +DI SE
Sbjct: 128 QTLAFQTIA-NLHAPAA-TVVSILREVSAAVATGVGSVGDLHTSLPPGMIGGQVMDIESE 185
Query: 224 GKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIE-----VERVRNYARCIGLLFQV 278
G + + +E IH KT L+ +VV G ++G G+ + R+R + + GL FQ+
Sbjct: 186 GVKPTAELVEAIHRAKTGALITVSVVAGGLLGLGDQPSTTHDTIARLRTFGQKAGLAFQI 245
Query: 279 VDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASK 338
VDD+LD+T+ S +LGKTAGKD A+ KAT+P + GI + A EL+ A LA F A
Sbjct: 246 VDDVLDMTQDSAQLGKTAGKDTATDKATWPAVFGIPQSIHDAEELIADAFAALARF-AET 304
Query: 339 AAPLYFLANYIASRQN 354
AAPL LAN++ R+N
Sbjct: 305 AAPLKALANFLTERKN 320
>gi|229192390|ref|ZP_04319353.1| Geranyltranstransferase [Bacillus cereus ATCC 10876]
gi|228590967|gb|EEK48823.1| Geranyltranstransferase [Bacillus cereus ATCC 10876]
Length = 296
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/244 (47%), Positives = 163/244 (66%), Gaps = 1/244 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR+RPLL A+ + G + + + AACALEMIHT SL+HDD
Sbjct: 27 LQCPSVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + + A +S ++ VR + E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+V G+ D+ +EGK +++ ELEYIH HKT KLLE AV+ GA++ + E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++ +A+ IGL FQ+ DDILDV + EE+GK G DL + K+TY L ++ AK E
Sbjct: 207 KLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDLFNEKSTYTTLFTVDRAKDILEET 266
Query: 324 LGQA 327
+ +A
Sbjct: 267 IAEA 270
>gi|222097624|ref|YP_002531681.1| geranyltranstransferase [Bacillus cereus Q1]
gi|221241682|gb|ACM14392.1| geranyltranstransferase [Bacillus cereus Q1]
Length = 296
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/271 (43%), Positives = 177/271 (65%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR+RPLL A+ + G +++ + AACALEM+HT SL+HDD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMVHTYSLVHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + + A +S ++ VR + E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+V G+ D+ +EGK +++ ELEYIH HKT KLLE AV+ G+++ + E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++ +A+ IGL FQ+ DDILDV + EE+GK G D+++ K+TY L ++ AK E
Sbjct: 207 KLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILEET 266
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A + ++ + + L + + IA R N
Sbjct: 267 IAKAKDAISSLQL-QDEYLLSICDLIAKRNN 296
>gi|423137069|ref|ZP_17124712.1| hypothetical protein HMPREF9942_00850 [Fusobacterium nucleatum
subsp. animalis F0419]
gi|371961136|gb|EHO78779.1| hypothetical protein HMPREF9942_00850 [Fusobacterium nucleatum
subsp. animalis F0419]
Length = 297
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 116/296 (39%), Positives = 174/296 (58%), Gaps = 9/296 (3%)
Query: 64 FEEYMIRKAE----QVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
F+ Y+ K + ++ K L E L P I K M Y++L GGKR+RP L + EL+
Sbjct: 4 FQVYLKEKTDFFETELKKELKE---LSYPETIAKGMEYAILNGGKRLRPFLLFVTLELLN 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
D + + +A ALEMIH+ SL+HDDLP LDND+ RR K +H+VFGE+ IL GD+LL+
Sbjct: 61 EDINKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTY 120
Query: 180 ALEHVAV-NIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
A ++ N+ +S +++V I++ G+ G++ G+ +DI SE K + L+ L+YIH H
Sbjct: 121 AFYVLSQKNLELLSSEQIVNIISKTSEYSGINGMIGGQMIDIQSENKKIDLETLKYIHSH 180
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT KL++ + +I + E + YA IGL FQV DDILDV + E+LGK G
Sbjct: 181 KTGKLIKLPIEIACIIANVEKDKREVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGS 240
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELA-YFEASKAAPLYFLANYIASRQ 353
D+ KATYP ++G+E +K + + +A + + F K L LA++I R
Sbjct: 241 DVDLHKATYPSILGMEESKKILNDTVEKAKQIIKDKFGDEKGKILISLADFIKDRN 296
>gi|372490114|ref|YP_005029679.1| geranylgeranyl pyrophosphate synthase [Dechlorosoma suillum PS]
gi|359356667|gb|AEV27838.1| geranylgeranyl pyrophosphate synthase [Dechlorosoma suillum PS]
Length = 302
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 171/295 (57%), Gaps = 5/295 (1%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
PF ++M + + AL + P +H AMRYS L GGKRVRPLL A+ EL G
Sbjct: 9 LPFPDWMAQTQARTEAALGRFLPAAETIPQGLHDAMRYSALGGGKRVRPLLAFAAGELCG 68
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
ACA+EMIH SL+HDDLP +D+D RR +P H + E TA+L GDAL S
Sbjct: 69 ATAEALDCVACAVEMIHVYSLVHDDLPCMDDDVLRRGRPTCHVQYDEPTALLVGDALQSR 128
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A E +A SP + + + + G G+ G+ +D+AS GK + +LE +H K
Sbjct: 129 AFEILAAQ-PWPSPAQGLELVRLLAHGSGSCGMAGGQAIDLASVGKSLDQPQLELMHALK 187
Query: 240 TAKLLEAAVVCGAVIGGG-NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
T L+ AAV+ GA G A E+ER+ +A+ GLLFQVVDDILD T S+ LGKTAGK
Sbjct: 188 TGALIRAAVLMGAHCGTPLAAAELERLDAFAKRAGLLFQVVDDILDCTASTATLGKTAGK 247
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
D A+ K TY +L+G+E A+ A +L A+ L F +A L LA+YI +R+
Sbjct: 248 DEAADKPTYVRLLGLETARQLADDLRRDALGALEGF-GPRARRLIELAHYITTRK 301
>gi|374639383|gb|AEZ55680.1| geranyl diphosphate synthase small subunit type II.2 [Salvia
miltiorrhiza]
Length = 331
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/298 (38%), Positives = 174/298 (58%), Gaps = 15/298 (5%)
Query: 60 PTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLA-GGKRVRPLLCIASCELV 118
P F + Y +++++ LDEA+ ++ P +I++AMRYS+LA G KR P++C+A+CE+
Sbjct: 36 PGFDLKTYWTSLIKEIDQKLDEAIPVKYPQQIYEAMRYSVLAKGAKRAPPVMCVAACEIF 95
Query: 119 GGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLS 178
GG+ A P ACALEM+H+ SLIHDDLP +D+D RR +P++H VFG AILAGDAL
Sbjct: 96 GGNRLAAFPTACALEMVHSASLIHDDLPCMDDDPSRRGQPSNHTVFGVDMAILAGDALFP 155
Query: 179 LALEHVAVNIAG--VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIH 236
L H+ + V R++R IAE+ A+G G+ AG+F+D+ V L +
Sbjct: 156 LGFRHIVSHTPTDLVPHTRLLRVIAEIARAVGSTGMAAGQFLDLEGGPNAVDL-----VQ 210
Query: 237 VHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTA 296
K ++ + + VCG ++ G + E+E +R Y R +G+L++VVDDI + +E K+
Sbjct: 211 EKKFGEMGQCSAVCGGLLAGASDDEIEHLRKYGRAVGILYEVVDDIRETKLQPDEKDKS- 269
Query: 297 GKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFE--ASKAAPLYFLANYIASR 352
S +Y + G+E A A +L QA +EL E K PLY +Y A R
Sbjct: 270 ----KSKGKSYVSVYGVEKAMEVAEDLRSQAKKELESLEKYGDKVLPLYSFVDYAADR 323
>gi|357417905|ref|YP_004930925.1| geranylgeranyl pyrophosphate synthase [Pseudoxanthomonas spadix
BD-a59]
gi|355335483|gb|AER56884.1| geranylgeranyl pyrophosphate synthase [Pseudoxanthomonas spadix
BD-a59]
Length = 292
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 172/276 (62%), Gaps = 8/276 (2%)
Query: 65 EEYMIRKAEQVNKALDEAVV--LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
E R A++V +LD A+ ++ P ++H AMR++ L GGKR+RPLL A+ + G DE
Sbjct: 4 EAVFTRWAQRVEASLDAALPDPVRAPQRLHAAMRHAALGGGKRMRPLLVYAAGTMTGADE 63
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
A A+E+IH SL+HDDLP +D+D RR +P H F E+TA+LAGDAL +LA E
Sbjct: 64 GVLDAPATAVELIHAYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAVLAGDALQTLAFE 123
Query: 183 HVAVNIAGVSPDRVVRA--IAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKT 240
+A + AG V+R + + A GV G+ G+ +DI + G+ SL+ L+++H KT
Sbjct: 124 VLAGSDAGA----VLRVAWLQTLAQASGVAGMCGGQALDIDATGQLQSLQALQHMHALKT 179
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
L+ A+V GA+ GG ++R+ +A+ +GL FQV DDILD+ SSE LGKTAGKD
Sbjct: 180 GALIRASVRLGALAGGVEEATLQRLDAFAQALGLAFQVRDDILDIEASSETLGKTAGKDA 239
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEA 336
A K+TYP L+GI+ AK+ L Q E LA F A
Sbjct: 240 AQSKSTYPALLGIDGAKAKLDALAAQMHELLAPFGA 275
>gi|403668188|ref|ZP_10933465.1| geranyltranstransferase [Kurthia sp. JC8E]
Length = 293
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/290 (41%), Positives = 173/290 (59%), Gaps = 4/290 (1%)
Query: 63 PFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
PF + K E V L E++ Q P + +AM YSL AGGKRVRPL +A + +
Sbjct: 6 PFMAEQMPKIEDVMLTLVESI--QAPEILKEAMSYSLKAGGKRVRPLFVLAVMDHLAEIT 63
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
A A+EMIHT SLIHDDLP +DND+ RR K +H+VFGE+ A LAGDAL +L
Sbjct: 64 EEAYIVGAAVEMIHTYSLIHDDLPSMDNDDYRRGKLTNHKVFGEAYATLAGDALNTLPFG 123
Query: 183 HVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAK 242
+A + V+ ++ V + + G EG+V G+ +DI E K +++ EL ++HV+KT
Sbjct: 124 IIA-RMQNVTAEQKVALVQLLSETAGAEGMVGGQILDIEGETKQLTIDELVHVHVNKTGA 182
Query: 243 LLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
+L ++ GA++ ++ +R+YA IGL FQ+ DDILD+ ++E+LGKTAGKD+AS
Sbjct: 183 ILRFSIEAGAILANATEEQLAILRDYAYHIGLAFQIKDDILDIEGTTEQLGKTAGKDVAS 242
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
K+TYP L+ +E AK ++E L+ + K L LA YI R
Sbjct: 243 DKSTYPALLTLEGAKEKLTMHYDASLEALSKLPSEKTL-LEQLATYIVKR 291
>gi|381159562|ref|ZP_09868794.1| geranylgeranyl pyrophosphate synthase [Thiorhodovibrio sp. 970]
gi|380877626|gb|EIC19718.1| geranylgeranyl pyrophosphate synthase [Thiorhodovibrio sp. 970]
Length = 297
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 129/295 (43%), Positives = 185/295 (62%), Gaps = 5/295 (1%)
Query: 63 PFEEYMIRKAEQVNKALDEAV--VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
P ++Y+ +V +A + + V Q P ++H+AMR+ L GGKR+RP L A+ VG
Sbjct: 5 PLKQYLKICQARVERAFEMRLPSVDQEPARLHQAMRHGALGGGKRLRPTLAYAAASAVGV 64
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
AACALE+IHT SLIHDDLP +D+D+ RR +P H+ F E+TAILAGDAL +LA
Sbjct: 65 TREQIDAAACALELIHTYSLIHDDLPAMDDDDLRRGQPTCHKAFDEATAILAGDALQTLA 124
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKT 240
+ +A + A + D +R I + A G G+VAG+ +D+ASEG+ + LE IH+HKT
Sbjct: 125 FQWLATDSAN-TVDARIRMIEVLARAAGSRGMVAGQALDLASEGQALDRAALENIHLHKT 183
Query: 241 AKLLEAAVVCGAVIGGGNAIE-VERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
L++A+V A++ E + YARCIGL FQ+ DD+LDV +E LGK +G+D
Sbjct: 184 GALIQASVNMAALVKPETTGEQASALDGYARCIGLAFQIQDDLLDVEGQTEVLGKQSGQD 243
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A KATYP L+GI+ A A L+ +A L+ F+ S A PL ++A+YI +R +
Sbjct: 244 AAHHKATYPSLLGIDAAHKEAARLIEEAHRCLSGFD-SGADPLRWIADYIIARDH 297
>gi|452974989|gb|EME74808.1| (2E,6E)-farnesyl diphosphate synthase IspA [Bacillus sonorensis
L12]
Length = 296
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/271 (42%), Positives = 179/271 (66%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + ++M YSL AGGKR+RP+L +A G E +P CA+EMIHT SLIHDD
Sbjct: 27 LQAPSTLKQSMLYSLEAGGKRLRPILVLALLHAYGKKEEDGIPVGCAVEMIHTYSLIHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSP-DRVVRAIAEM 203
LP +D+D+ RR KP +H+++GE+TA+LAGDALL+ + + + +++ P ++ +R + E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKIYGEATAVLAGDALLTESFKMITTHVSAEVPAEKRLRLVNEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
SA G EG+V G+ +D+ +E K VSL+EL+ IH KTAKLL +V+ GA++ E+E
Sbjct: 147 ISAAGAEGMVGGQILDMEAESKPVSLQELQSIHEGKTAKLLSFSVIAGAILADAPEEEIE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++R ++ IG+ FQ+ DDILD+ S +++GK G D ++GK+TYP L+ +E AK E
Sbjct: 207 KLREFSHHIGIGFQIRDDILDLEGSEDKIGKRIGSDTSNGKSTYPSLLSLEGAKQKLDEH 266
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A + ++ + LY L + IA R +
Sbjct: 267 IKKAKQLISELSLEQDL-LYELCDMIADRDH 296
>gi|433284426|emb|CCO06628.1| geranyltranstransferase [Candidatus Desulfamplus magnetomortis
BW-1]
Length = 322
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/309 (38%), Positives = 178/309 (57%), Gaps = 17/309 (5%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVV-LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
F Y+ K ++ L + + L P ++ KA+ +SL+AGGKR+RP+L +A+ + G
Sbjct: 13 FDLSAYLKEKRAILDDYLKKVIQELNPENELAKAIEHSLMAGGKRLRPILAMAAAQATGK 72
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
D A+PAAC++EMIHT SLIHDDLP +DND+ RR P H+ F E+TAILAGDALL+ A
Sbjct: 73 DFRLALPAACSIEMIHTYSLIHDDLPAMDNDDLRRGIPTCHKAFSEATAILAGDALLTHA 132
Query: 181 ---LEHVAVNIAGVSPDR--VVRAIAEMCSAMGVEGLVAGEFVDIASEG----------- 224
L H + P+ + + +A + A G G+V G+ +D+ + G
Sbjct: 133 FTILTHNPRAMFDPCPNDEILFKLVAMISRAAGAHGMVEGQMMDMQATGFLDQHNQSKVN 192
Query: 225 KDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILD 284
D L L+ +H KT K++ +V GA+ G + ++ER+ YA +GL FQV DDIL+
Sbjct: 193 IDNCLAHLKKLHELKTGKMIVVSVESGALSAGADPDQIERLAKYAGKVGLAFQVADDILN 252
Query: 285 VTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYF 344
V +GK AG D + K T+P L+G+E +++FA L+ +A+E L F PL
Sbjct: 253 VEGDPYVMGKAAGSDAMNNKMTFPALLGLEPSRTFARNLIQEALEPLNTFNEKDILPLKA 312
Query: 345 LANYIASRQ 353
+A YI R+
Sbjct: 313 IAGYIVDRK 321
>gi|338812850|ref|ZP_08625003.1| geranylgeranyl pyrophosphate synthase [Acetonema longum DSM 6540]
gi|337275149|gb|EGO63633.1| geranylgeranyl pyrophosphate synthase [Acetonema longum DSM 6540]
Length = 295
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 131/297 (44%), Positives = 185/297 (62%), Gaps = 6/297 (2%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQ---PPVKIHKAMRYSLLAGGKRVRPLLCIASCEL 117
T +EY +K ++ L+ + Q PPV I +AMRYS+ AGGKR+RP+L +A+ +
Sbjct: 2 TDTLKEYCRQKVACIDHKLELLLPKQGQYPPV-ILEAMRYSVFAGGKRMRPVLLMAAADA 60
Query: 118 VGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALL 177
V G A LEMIHT SLIHDDLP +D+D+ RR KP +H+V+GE+ AILAGDALL
Sbjct: 61 VNGRGEEYTHVAAGLEMIHTYSLIHDDLPAMDDDDYRRGKPTNHKVYGEAMAILAGDALL 120
Query: 178 SLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHV 237
+ A E V V D ++R IAE+ +A+G G+V G+ +D+ SEGK + L+E+EY+H
Sbjct: 121 TYAFE-VMGRQPDVLSDVLLRVIAEIAAAVGPLGMVGGQAMDLFSEGKQIGLQEIEYLHK 179
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
KT L +A++ GA++ G +++ + Y+ GL FQ+ DDILDVT + ELGK G
Sbjct: 180 AKTGALFKASIRAGAMLAGAGEEQLQDLTQYSDYFGLAFQITDDILDVTGNQAELGKPVG 239
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
D + KATY L ++ AKS AGE + A+ L +F +A L LA Y+ SR N
Sbjct: 240 SDSKNQKATYVSLYSVDKAKSIAGEAVDGALNTLKFF-GPEADILRDLAKYLLSRNN 295
>gi|406980661|gb|EKE02234.1| Polyprenyl synthetase [uncultured bacterium]
Length = 302
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 104/254 (40%), Positives = 159/254 (62%), Gaps = 1/254 (0%)
Query: 75 VNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEM 134
+N L++ + ++ P I ++MRY+ L+ GKR+RP+L + S GG+ +P ACA+EM
Sbjct: 22 INTYLEKYLEIRYPQIIWESMRYTTLSDGKRIRPVLALESARACGGNIENVIPTACAIEM 81
Query: 135 IHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNI-AGVSP 193
IH SLIHDDLP +DND+ RR + +H+V+GE+ A+LAGDALLS A + + + A V
Sbjct: 82 IHAQSLIHDDLPCMDNDDYRRGRLTNHKVYGEAFAVLAGDALLSYAPQIIIQHTPAYVDR 141
Query: 194 DRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAV 253
D + + + E+ A G GL+ G+ +DI SE K++ + YIH HKT +L + A+ GA+
Sbjct: 142 DLLFQVLEELAIAAGALGLIGGQVIDIDSENKEIDIPTFNYIHTHKTGELFKFAMRSGAL 201
Query: 254 IGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGI 313
+ ++E + Y R +G FQ+ DDILD+T + E LGKT GKD + K T+P L G+
Sbjct: 202 LSQATDEQLEILTEYGRLVGYAFQIADDILDITGTKESLGKTPGKDKLAKKNTHPSLFGL 261
Query: 314 ENAKSFAGELLGQA 327
+K +L +A
Sbjct: 262 SQSKEEVEQLCSKA 275
>gi|340750026|ref|ZP_08686873.1| dimethylallyltransferase [Fusobacterium mortiferum ATCC 9817]
gi|340562527|gb|EEO34717.2| dimethylallyltransferase [Fusobacterium mortiferum ATCC 9817]
Length = 295
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 114/297 (38%), Positives = 174/297 (58%), Gaps = 10/297 (3%)
Query: 64 FEEYMIRKAEQVNKALDEAV-VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
F+EY+ + V +D+ + L P I + M+Y++L GGKR+RP+L + +++G +
Sbjct: 3 FKEYLGMGKKLVEDGIDKYLGELTYPEVIAEGMKYAVLNGGKRLRPILLFMTLDILGCER 62
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
+ A A+EMIH+ SL+HDDLP LDND+ RR K +H+ FGE+ IL GDALL+ A
Sbjct: 63 EKGLATASAIEMIHSYSLVHDDLPALDNDDYRRGKLTTHKKFGEAEGILIGDALLTHAFY 122
Query: 183 HVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAK 242
+ + +S +++V + S G+ G++ G+ VDIASEGK + L+ L Y+H HKT K
Sbjct: 123 VLTEKNSHLSAEKIVEIVKLTSSYAGINGMIGGQMVDIASEGKKIDLETLRYMHAHKTGK 182
Query: 243 LLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
L++ V VI + + E + Y+ IGL FQ+ DDILD+ E +GK G DL
Sbjct: 183 LIKLPVEVACVIADASIEDREVLTKYSELIGLAFQIKDDILDIEGDFETIGKPVGSDLEH 242
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEEL-----AYFEASKAAPLYFLANYIASRQN 354
K+TYP ++G+ +K +LL + IEE A F ++ L LA+YI +R
Sbjct: 243 DKSTYPSILGMAESK----KLLSETIEEAKSIIRARFGEERSKTLLDLADYIGNRDK 295
>gi|421526793|ref|ZP_15973399.1| dimethylallyltransferase [Fusobacterium nucleatum ChDC F128]
gi|402256901|gb|EJU07377.1| dimethylallyltransferase [Fusobacterium nucleatum ChDC F128]
Length = 297
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 116/296 (39%), Positives = 174/296 (58%), Gaps = 9/296 (3%)
Query: 64 FEEYMIRKAE----QVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
F+ Y+ K ++ K L E L P I K M Y++L GGKR+RP L A+ EL+
Sbjct: 4 FQVYLKEKTNFFETELKKELQE---LSYPETIAKGMEYAVLNGGKRLRPFLLFATLELLN 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
+ + +A ALEMIH+ SL+HDDLP LDND+ RR K +H+VFGE+ IL GD+LL+
Sbjct: 61 QNIEKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTY 120
Query: 180 ALEHVAV-NIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
A ++ N+ +S +++V I++ G+ G++ G+ +DI SE K + L+ L+YIH H
Sbjct: 121 AFYVLSQKNLELLSSEQIVNIISKTSEYSGINGMIGGQMIDIQSENKKIDLETLKYIHSH 180
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT KL++ + +I + E + YA IG+ FQV DDILDV + E+LGK G
Sbjct: 181 KTGKLIKLPIEIACIIANLEKNKREVLEEYADLIGIAFQVKDDILDVEGNFEDLGKPVGS 240
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELA-YFEASKAAPLYFLANYIASRQ 353
D+ KATYP ++G+E +K + + +A E + F K L LA++I +R
Sbjct: 241 DIDLHKATYPSILGMEESKKILNDTVEKAKEIIKNKFGEEKGKILISLADFIKNRN 296
>gi|169828970|ref|YP_001699128.1| geranyltranstransferase [Lysinibacillus sphaericus C3-41]
gi|168993458|gb|ACA40998.1| Geranyltranstransferase [Lysinibacillus sphaericus C3-41]
Length = 293
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 114/270 (42%), Positives = 163/270 (60%), Gaps = 3/270 (1%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
+ PV + +M YSL AGGKR+RPL +A EL + + +E+IHT SLIHDD
Sbjct: 27 IDAPVDLKDSMLYSLKAGGKRIRPLFVLAVLELYRKNLQDGLIVGAVIEIIHTYSLIHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMC 204
LP +DND+ RR KP +H+V+GE+ A LAGDAL +LA +A V+ ++ + + +
Sbjct: 87 LPSMDNDDFRRGKPTNHKVYGEALATLAGDALNTLAFGILAR--MDVTAEKRIELVQLLS 144
Query: 205 SAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVER 264
A G EG+V G+ +D+ E + + L ELE +HV+KT LL ++ GAV+ + +
Sbjct: 145 VAAGAEGMVGGQVLDMEGEQRQLDLTELEQVHVNKTGALLRFSIEAGAVLADASKQDRAT 204
Query: 265 VRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELL 324
++ YA IGL FQ+ DDILD+ ++EELGKTAGKD+AS K+TYP L+ ++ AK E
Sbjct: 205 LKEYAHHIGLAFQIQDDILDIEGTTEELGKTAGKDVASDKSTYPALLTLDGAKEKLAEHY 264
Query: 325 GQAIEELAYFEASKAAPLYFLANYIASRQN 354
AI L A+ L A YI R+N
Sbjct: 265 QHAINALDQLPID-ASLLRDFAAYIVHRKN 293
>gi|302185471|ref|ZP_07262144.1| polyprenyl synthetase [Pseudomonas syringae pv. syringae 642]
Length = 295
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 128/294 (43%), Positives = 184/294 (62%), Gaps = 9/294 (3%)
Query: 67 YMIRKAEQVNKALDEAVVLQPPV----KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
Y + +VN ALD + Q P ++++AMRYS++ GGKRVRPLL A+CE +GG
Sbjct: 5 YQAQSQTRVNAALDG--LFQAPAPELDRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 63 EDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFT 122
Query: 183 H-VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
+A ++ + ++ + + +A G G+V G+ +D+ S G + LEY+H HKT
Sbjct: 123 ALLAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTG 182
Query: 242 KLLEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
L+EA+V GA+ G + ++ ++ YAR IGL FQV DDILDV + LGK G D+
Sbjct: 183 ALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADI 242
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A K TYP L+G+E AK +A EL QA++ L+ F+ + A PL LA YI R++
Sbjct: 243 ARDKPTYPALLGLEAAKHYALELRDQALQALSPFD-TAAEPLRQLARYIVERRH 295
>gi|260914110|ref|ZP_05920583.1| geranyltranstransferase [Pasteurella dagmatis ATCC 43325]
gi|260631743|gb|EEX49921.1| geranyltranstransferase [Pasteurella dagmatis ATCC 43325]
Length = 306
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 116/273 (42%), Positives = 165/273 (60%), Gaps = 4/273 (1%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQP-PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
+ F + + + E++N L + + L P + +AMRY +L GGKR+RP L A+ ++G
Sbjct: 13 YQFSQDLQQVQERINAFLAQQLNLNTAPSPLIEAMRYGVLLGGKRIRPFLVYATGRMLGA 72
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
D AA LE IH SLIHDDLP +DND RR +P H F E+TAILAGDAL + A
Sbjct: 73 DLIQLDYAAAGLEAIHAYSLIHDDLPAMDNDSLRRGQPTCHIAFDEATAILAGDALQAFA 132
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKT 240
E + +S ++ + ++ + A G +G+ G+ +D+ SE K +SL ELE IH +KT
Sbjct: 133 FE-ILTQAPALSAEQKLALVSTLAQASGAKGMCLGQSLDLISEQKQISLAELEQIHRNKT 191
Query: 241 AKLLEAAVVCGAVIGG--GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
LL AA+ G + G+ ++++ Y+R IGL FQV DDILD+ SE LGKT G
Sbjct: 192 GALLTAALQLGFICSPHFGDKTLAQQLQRYSRAIGLAFQVQDDILDIEGESEVLGKTVGS 251
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEEL 331
DL + K+TYPKL+G++ AK A EL +AI L
Sbjct: 252 DLMADKSTYPKLLGLDGAKQKAQELYREAISTL 284
>gi|19704662|ref|NP_604224.1| dimethylallyltransferase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|19714968|gb|AAL95523.1| Dimethylallyltransferase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
Length = 297
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 116/296 (39%), Positives = 174/296 (58%), Gaps = 9/296 (3%)
Query: 64 FEEYMIRKAE----QVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
F+ Y+ K + ++ K L E L P I K M Y++L GGKR+RP L + EL+
Sbjct: 4 FQVYLKEKTDFFETELKKELKE---LSYPETIAKGMEYAILNGGKRLRPFLLFVTLELLN 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
+ + + +A ALEMIH+ SL+HDDLP LDND+ RR K +H+VFGE+ IL GD+LL+
Sbjct: 61 ENINKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTY 120
Query: 180 ALEHVAV-NIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
A ++ N+ +S ++V I++ G++G++ G+ +DI SE K + L+ L+YIH H
Sbjct: 121 AFYVLSQKNLELLSSKQIVNIISKTSEYAGIDGMIGGQMIDIQSENKKIDLETLKYIHSH 180
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT KL++ + +I + E + YA IGL FQV DDILDV + E+LGK G
Sbjct: 181 KTGKLIKLPIEIACIIANLEKDKREVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGS 240
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELA-YFEASKAAPLYFLANYIASRQ 353
D+ KATYP ++G+E +K + +A E + F K L LA++I R+
Sbjct: 241 DVDLHKATYPSILGMEESKKILNNTVEKAKEIIKNKFGEEKGKVLISLADFIKDRK 296
>gi|359798545|ref|ZP_09301116.1| geranyltranstransferase [Achromobacter arsenitoxydans SY8]
gi|359363367|gb|EHK65093.1| geranyltranstransferase [Achromobacter arsenitoxydans SY8]
Length = 303
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 122/299 (40%), Positives = 178/299 (59%), Gaps = 15/299 (5%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQP----PVKIHKAMRYSLLAGGKRVRPLLCIAS---CE 116
F E++ +A + LD+ +L P P ++H+AMRY++L GGKRVR L A+ C
Sbjct: 8 FPEWLQGRARHIEDVLDD--LLPPADALPSRLHEAMRYAVLGGGKRVRAALVYAAGQACP 65
Query: 117 LVG---GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAG 173
+ G E+ AA A+E+IH SL+HDDLP +D+D RR +P +H F E+TA+LAG
Sbjct: 66 VSGSVLAIEASLDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTTHVQFDEATAMLAG 125
Query: 174 DALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELE 233
DAL LA E +A ++P +V+A + A G +G+ G+ +D+ S G+ +S EL+
Sbjct: 126 DALQPLAFELLASMP--IAPALIVQATQSLARAAGSQGMAGGQAIDLFSVGRSLSRDELQ 183
Query: 234 YIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELG 293
+H KT +L +V G ++ G ++ + + YA+ +GL FQVVDDILDVT S LG
Sbjct: 184 MMHGMKTGAMLACSVALGGIVAGASSASRQALDAYAQAVGLAFQVVDDILDVTADSASLG 243
Query: 294 KTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
KT GKD A K TY L+G+ A++FAGEL A++ LA A L LA++I R
Sbjct: 244 KTPGKDAAENKPTYVSLLGLSEARAFAGELREAALDALAPL-GDAGARLAQLADFIVLR 301
>gi|424065783|ref|ZP_17803257.1| geranyltranstransferase [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
gi|408002992|gb|EKG43211.1| geranyltranstransferase [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
Length = 295
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 128/292 (43%), Positives = 183/292 (62%), Gaps = 5/292 (1%)
Query: 67 YMIRKAEQVNKALDEAVVLQPPV--KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW 124
Y + +VN ALD P ++++AMRYS++ GGKRVRPLL A+CE +GG
Sbjct: 5 YQAQSQTRVNAALDGLFKAPGPELERLYQAMRYSVMNGGKRVRPLLAYAACEALGGVAED 64
Query: 125 AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH- 183
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 65 ANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTAL 124
Query: 184 VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
+A ++ + ++ + + +A G G+V G+ +D+ S G + LEY+H HKT L
Sbjct: 125 LAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGAL 184
Query: 244 LEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
+EA+V GA+ G + ++ ++ YAR IGL FQV DDILDV + LGK G D+A
Sbjct: 185 IEASVRLGALASGHADQQRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADIAR 244
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TYP L+G+E AK +A EL QA++ L+ F+A+ A PL LA YI R++
Sbjct: 245 DKPTYPALLGLEAAKHYALELRDQALQALSPFDAA-AEPLRQLARYIVERRH 295
>gi|146308855|ref|YP_001189320.1| farnesyl-diphosphate synthase [Pseudomonas mendocina ymp]
gi|421503890|ref|ZP_15950835.1| farnesyl-diphosphate synthase [Pseudomonas mendocina DLHK]
gi|145577056|gb|ABP86588.1| farnesyl-diphosphate synthase [Pseudomonas mendocina ymp]
gi|400345394|gb|EJO93759.1| farnesyl-diphosphate synthase [Pseudomonas mendocina DLHK]
Length = 295
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 126/277 (45%), Positives = 178/277 (64%), Gaps = 7/277 (2%)
Query: 84 VLQPP----VKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMS 139
+ QPP ++++AMRYS++ GGKRVRPLL A+CE + G+ A AACA+E+IH S
Sbjct: 20 LFQPPRAELQRLYEAMRYSVMNGGKRVRPLLVYAACEALDGNLDRADGAACAVELIHAYS 79
Query: 140 LIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRV-VR 198
L+HDDLP +D+D+ RR +P +H+ F E++AILAGD L SLA E +A V ++
Sbjct: 80 LVHDDLPAMDDDDLRRGQPTTHKAFDEASAILAGDGLQSLAFEVLADRRRNPQDAEVRLQ 139
Query: 199 AIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVI-GGG 257
I + SA G G+V G+ +D+ S G+ + LE +H HKT L+EA+V+ GA+ G
Sbjct: 140 MIDALSSAAGPAGMVGGQAIDLGSVGQQLDQAALETMHRHKTGALIEASVLLGALASGNA 199
Query: 258 NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAK 317
+ + ++ + YAR +GL FQV DDILDV + LGKT GKD A+ K TYP L+G++ AK
Sbjct: 200 DELSLKALLQYARAVGLAFQVQDDILDVESDTATLGKTQGKDEANDKPTYPALLGLDAAK 259
Query: 318 SFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+A EL QA+ L F S+A PL LA YI R++
Sbjct: 260 DYALELRDQALHVLRPF-GSQAEPLRELARYIVERRS 295
>gi|336401302|ref|ZP_08582073.1| hypothetical protein HMPREF0404_01364 [Fusobacterium sp. 21_1A]
gi|336161212|gb|EGN64219.1| hypothetical protein HMPREF0404_01364 [Fusobacterium sp. 21_1A]
Length = 297
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 116/296 (39%), Positives = 173/296 (58%), Gaps = 9/296 (3%)
Query: 64 FEEYMIRKAE----QVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
F+ Y+ K + ++ K L E L P I K M Y++L GGKR+RP L + EL+
Sbjct: 4 FQVYLKEKTDFFETELKKELKE---LSYPETIAKGMEYAILNGGKRLRPFLLFVTLELLN 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
D + + +A ALEMIH+ SL+HDDLP LDND+ RR K +H+VFGE+ IL GD+LL+
Sbjct: 61 EDINKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTY 120
Query: 180 ALEHVAV-NIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
A ++ N+ +S +++V I++ G+ G++ G+ +DI SE K + L+ L+YIH H
Sbjct: 121 AFYVLSQKNLELLSSEQIVNIISKTSEYSGINGMIGGQMIDIQSENKKIDLETLKYIHSH 180
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT KL++ + +I + + + YA IGL FQV DDILDV + E+LGK G
Sbjct: 181 KTGKLIKLPIEIACIIANVEKDKRKVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGS 240
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELA-YFEASKAAPLYFLANYIASRQ 353
D+ KATYP ++G+E +K + +A E + F K L LA++I R
Sbjct: 241 DVDLHKATYPSILGMEESKKILNNTVEKAKEIIKNKFGDEKGKILISLADFIKDRN 296
>gi|229031827|ref|ZP_04187815.1| Geranyltranstransferase [Bacillus cereus AH1271]
gi|228729445|gb|EEL80434.1| Geranyltranstransferase [Bacillus cereus AH1271]
Length = 296
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 118/271 (43%), Positives = 175/271 (64%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR+RPLL A+ + G + + + AACALEMIHT SL+HDD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + + A +S ++ VR + E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+V G+ D+ +EGK +++ ELEYIH HKT KLLE AV+ G+++ + E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++ +A+ IGL FQ+ DDILDV + EE+GK G D+++ K+TY L ++ AK E
Sbjct: 207 KLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKGILEET 266
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A + + + + L + + IA R N
Sbjct: 267 IAKAKDAIGSLQL-QDEYLLSICDLIAKRNN 296
>gi|440742834|ref|ZP_20922156.1| polyprenyl synthetase [Pseudomonas syringae BRIP39023]
gi|440376685|gb|ELQ13348.1| polyprenyl synthetase [Pseudomonas syringae BRIP39023]
Length = 295
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 128/292 (43%), Positives = 183/292 (62%), Gaps = 5/292 (1%)
Query: 67 YMIRKAEQVNKALDEAVVLQPPV--KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW 124
Y + +VN ALD P ++++AMRYS++ GGKRVRPLL A+CE +GG
Sbjct: 5 YQAQSQTRVNAALDALFKAPGPELERLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAED 64
Query: 125 AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH- 183
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 65 ANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTAL 124
Query: 184 VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
+A ++ + ++ + + +A G G+V G+ +D+ S G + LEY+H HKT L
Sbjct: 125 LAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGAL 184
Query: 244 LEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
+EA+V GA+ G + ++ ++ YAR IGL FQV DDILDV + LGK G D+A
Sbjct: 185 IEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADIAR 244
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TYP L+G+E AK +A EL QA++ L+ F+A+ A PL LA YI R++
Sbjct: 245 DKPTYPALLGLEAAKHYALELRDQALQALSPFDAA-AEPLRQLARYIVERRH 295
>gi|358343453|ref|XP_003635816.1| hypothetical protein MTR_011s1001, partial [Medicago truncatula]
gi|355501751|gb|AES82954.1| hypothetical protein MTR_011s1001, partial [Medicago truncatula]
Length = 277
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 115/278 (41%), Positives = 162/278 (58%), Gaps = 15/278 (5%)
Query: 80 DEAVVLQPPVKIHKAMRYSLLA-GGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTM 138
DEA+ +Q P +I++AMRYS LA G KR P++CI++CEL GG A P ACALEM+H
Sbjct: 1 DEAIEVQFPQQIYEAMRYSALAKGAKRSPPVMCISACELFGGSRLAAFPTACALEMVHAA 60
Query: 139 SLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAG--VSPDRV 196
SLIHDDLP +D+ RR +P++H ++G AILAGDAL L +H+ + V RV
Sbjct: 61 SLIHDDLPCMDDSLSRRGQPSNHTIYGVDMAILAGDALFPLGFQHIVSHTPSDLVPEPRV 120
Query: 197 VRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGG 256
+R IAE+ +G G+ AG+F+D+ V L I K ++ E + VCG ++ G
Sbjct: 121 LRVIAEIARCVGSTGMAAGQFLDLKGGPNAVGL-----IQDKKFGEMAECSAVCGGLLAG 175
Query: 257 GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENA 316
E+ER+R Y R +G+L+ +VDDIL+ E L KD + +Y ++ G+E A
Sbjct: 176 AEDDEIERLRRYGRAVGVLYAIVDDILE-----ERLKPEGDKDRENSGKSYVEVYGVEKA 230
Query: 317 KSFAGELLGQAIEELAYFE--ASKAAPLYFLANYIASR 352
A EL +A+EEL FE + PLY NY R
Sbjct: 231 AEVAEELRAKALEELDGFEKYGDQVLPLYSFVNYAIDR 268
>gi|66043872|ref|YP_233713.1| polyprenyl synthetase [Pseudomonas syringae pv. syringae B728a]
gi|422673861|ref|ZP_16733218.1| polyprenyl synthetase [Pseudomonas syringae pv. aceris str.
M302273]
gi|63254579|gb|AAY35675.1| farnesyl-diphosphate synthase [Pseudomonas syringae pv. syringae
B728a]
gi|330971592|gb|EGH71658.1| polyprenyl synthetase [Pseudomonas syringae pv. aceris str.
M302273]
Length = 295
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 128/292 (43%), Positives = 183/292 (62%), Gaps = 5/292 (1%)
Query: 67 YMIRKAEQVNKALDEAVVLQPPV--KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW 124
Y + +VN ALD P ++++AMRYS++ GGKRVRPLL A+CE +GG
Sbjct: 5 YQAQSQTRVNAALDGLFKAPGPELERLYQAMRYSVMNGGKRVRPLLAYAACEALGGVAED 64
Query: 125 AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH- 183
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 65 ANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTAL 124
Query: 184 VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
+A ++ + ++ + + +A G G+V G+ +D+ S G + LEY+H HKT L
Sbjct: 125 LAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGAL 184
Query: 244 LEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
+EA+V GA+ G + ++ ++ YAR IGL FQV DDILDV + LGK G D+A
Sbjct: 185 IEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADIAR 244
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TYP L+G+E AK +A EL QA++ L+ F+A+ A PL LA YI R++
Sbjct: 245 DKPTYPALLGLEAAKHYALELRDQALQALSPFDAA-AEPLRQLARYIVERRH 295
>gi|108804293|ref|YP_644230.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941]
gi|108765536|gb|ABG04418.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941]
Length = 299
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 114/265 (43%), Positives = 156/265 (58%), Gaps = 3/265 (1%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLD 149
++ +AMRYSLLAGGKRVRPLLC+ S L G +P+A A+E+IHT SLIHDDLP +D
Sbjct: 34 RLQEAMRYSLLAGGKRVRPLLCMESARLFGAPPERVLPSAAAIELIHTYSLIHDDLPAMD 93
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGV 209
ND+ RR +P SH+ FGE+ AILAGDA AL + V G R+ + E+ S+ GV
Sbjct: 94 NDDFRRGRPTSHKKFGEAMAILAGDAFFGEALTLITVRQEGTCEQRLG-VVQELASSTGV 152
Query: 210 EGLVAGEFVDIASEGKDVSLKE--LEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRN 267
G+V G+ +D+ G S L IH +KT L+ ++ GA++ G +E +
Sbjct: 153 NGMVGGQVLDMDQTGAGGSADPGMLFMIHRYKTGALIRSSARVGAILAGAGEEGLEAISR 212
Query: 268 YARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQA 327
YA +GL FQ+VDD+LD SSE LGK AG D GKAT+ + G+E A+ A +A
Sbjct: 213 YATELGLCFQIVDDVLDAVGSSERLGKRAGGDAERGKATFVSVFGLEGARREADAACERA 272
Query: 328 IEELAYFEASKAAPLYFLANYIASR 352
+ L E + L LA ++ R
Sbjct: 273 LRALGRLEGRDTSALGELALFVRHR 297
>gi|423457638|ref|ZP_17434435.1| hypothetical protein IEI_00778 [Bacillus cereus BAG5X2-1]
gi|401148022|gb|EJQ55515.1| hypothetical protein IEI_00778 [Bacillus cereus BAG5X2-1]
Length = 296
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 113/244 (46%), Positives = 165/244 (67%), Gaps = 1/244 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR+RPLL A+ + G +++ + AACALEMIHT SL+HDD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGIGAACALEMIHTYSLVHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + + A +S ++ VR + E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+V G+ D+ +EGK +++ ELEYIH HKT KLLE AV+ G+++ + E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++ +A+ IGL FQ+ DDILDV + EE+GK G D+++ K+TY L ++ AK E
Sbjct: 207 KLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILEET 266
Query: 324 LGQA 327
+ +A
Sbjct: 267 IAKA 270
>gi|108759145|ref|YP_632810.1| geranylgeranyl diphosphate synthase [Myxococcus xanthus DK 1622]
gi|108463025|gb|ABF88210.1| geranylgeranyl diphosphate synthase [Myxococcus xanthus DK 1622]
Length = 297
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 123/304 (40%), Positives = 181/304 (59%), Gaps = 15/304 (4%)
Query: 59 LPTFPFEEYMIRKAEQVNKALDEAVV-LQP---PVKIHKAMRYSLLAGGKRVRPLLCIAS 114
+ TF ++ + +V L+E V L P P ++ +AMRYSLLAGGKR+RP+LC+A
Sbjct: 1 MATFQLNSFLAAQQARVEALLNERVARLGPSGTPPQLAEAMRYSLLAGGKRLRPVLCLAF 60
Query: 115 CELVGGDESW---AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAIL 171
+LV + A AACALE +HT SL+HDDLP +DND+ RR + +H+V+GE+ AIL
Sbjct: 61 ADLVARGSAVSAVAGDAACALEYVHTYSLVHDDLPAMDNDDYRRGRLTNHKVYGEAMAIL 120
Query: 172 AGDALLSLALEHVAVNIAGVSPDRVVRAIA-EMCSAMGVEGLVAGEFVDIASEGKDVSLK 230
AGDALL+ A VA P+ + A+ E+ A G G+V G+ +D A E + +L
Sbjct: 121 AGDALLTEAFTLVASG-----PESMRAALCRELAVASGAAGMVGGQVLDTA-EDRPSALD 174
Query: 231 ELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSE 290
L +H KT L+ AA G + GG+A + R Y +GL FQ+ DD+LDVT ++
Sbjct: 175 YLIRMHRMKTGALIRAACRMGVLASGGDADALARADTYGDAVGLAFQIADDVLDVTATAA 234
Query: 291 ELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIA 350
ELGK AG D A+G+ T+P ++G+E +++ A + + +AI + E PL LA Y
Sbjct: 235 ELGKPAGADAAAGRFTFPAVVGLEASRTLADQKVAEAIAAVRPLEGED-GPLAALARYTV 293
Query: 351 SRQN 354
R++
Sbjct: 294 ERKS 297
>gi|291279338|ref|YP_003496173.1| geranyl diphosphate synthase / farnesyl diphosphate synthase
[Deferribacter desulfuricans SSM1]
gi|290754040|dbj|BAI80417.1| geranyl diphosphate synthase / farnesyl diphosphate synthase
[Deferribacter desulfuricans SSM1]
Length = 300
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 120/299 (40%), Positives = 186/299 (62%), Gaps = 7/299 (2%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQ--PPVKIHKAMRYSLLAGGKRVRPLLCIASCELV 118
F + Y+ A++V+ + + + + + ++MRYS+ AGGKR+RP+L +S +
Sbjct: 4 NFNLKNYIKFFAQRVDDWIRNYLTYENEQTIGLIESMRYSIFAGGKRLRPVLIYSSYGIF 63
Query: 119 GGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLS 178
P A A+EM+HT SLIHDDLP +D+D+ RR KP +H++FGE+TAILAGDALL+
Sbjct: 64 ESYFDKVTPFAAAVEMLHTYSLIHDDLPAMDDDDLRRGKPTNHKMFGEATAILAGDALLT 123
Query: 179 LALEHVA---VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYI 235
LA E + +N + + ++ A ++ + G +G+V G++ DI +E K++ L++I
Sbjct: 124 LAFEIMLDKDIN-KDIPTETILEAAFKLAKSAGYKGMVGGQYADIINENKEIDKNTLDFI 182
Query: 236 HVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKT 295
H HKTA L+ GA++G + + + + + IGL FQ+VDDILD+T ++EELGK
Sbjct: 183 HKHKTAALISYCCELGAILGFADEKDKQNLAEFGEKIGLAFQIVDDILDITSTTEELGKN 242
Query: 296 AGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
AG DL + KATYP++ G+E +KS A +L+ AI L + A PL +ANYI R N
Sbjct: 243 AGSDLKNKKATYPEIYGLEKSKSIAEDLINSAINILKPY-GKAATPLIEIANYILKRNN 300
>gi|30022260|ref|NP_833891.1| dimethylallyltransferase [Bacillus cereus ATCC 14579]
gi|29897817|gb|AAP11092.1| Dimethylallyltransferase [Bacillus cereus ATCC 14579]
Length = 296
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 114/244 (46%), Positives = 163/244 (66%), Gaps = 1/244 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR+RPLL A+ + G + + + AACALEMIHT SL+HDD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + + A +S ++ VR + E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+V G+ D+ +EGK +++ ELEYIH HK KLLE AV+ GA++ + E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKHKAGKLLEFAVLAGAILSDATEEQEE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++ +A+ IGL FQ+ DDILDV + EE+GK G DL++ K+TY L ++ AK E
Sbjct: 207 KLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDLSNEKSTYTTLFTVDRAKDILEET 266
Query: 324 LGQA 327
+ +A
Sbjct: 267 IAEA 270
>gi|410091965|ref|ZP_11288509.1| geranyltranstransferase [Pseudomonas viridiflava UASWS0038]
gi|409760708|gb|EKN45832.1| geranyltranstransferase [Pseudomonas viridiflava UASWS0038]
Length = 295
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 127/294 (43%), Positives = 182/294 (61%), Gaps = 9/294 (3%)
Query: 67 YMIRKAEQVNKALDEAVVLQPPV----KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
Y + +VN AL+ + Q P +++ AMRYS++ GGKRVRPLL A+CE +GG
Sbjct: 5 YQAQSQARVNAALEG--LFQAPTPELTRLYDAMRYSVMNGGKRVRPLLAYAACEALGGVA 62
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 63 EDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFT 122
Query: 183 H-VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
+A N+ ++ ++ + +A G G+V G+ +D+ S G + LEY+H HKT
Sbjct: 123 ALLAPNLTSRDAQTRLQMVSTLATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTG 182
Query: 242 KLLEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
L+EA+V GA+ G + +++ ++ YAR +GL FQV DDILDV + LGK G D+
Sbjct: 183 ALIEASVRLGALASGRADQTQLDALQVYARAVGLAFQVQDDILDVESDTATLGKRQGADI 242
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A K TYP L+G+E AK +A EL QA+ L F ++ A PL LA YI R++
Sbjct: 243 ARDKPTYPALLGLEAAKGYALELRDQALTALDLF-SNAAEPLRELARYIVERRH 295
>gi|115379699|ref|ZP_01466777.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps)
[Stigmatella aurantiaca DW4/3-1]
gi|310821402|ref|YP_003953760.1| geranylgeranyl diphosphate synthase [Stigmatella aurantiaca
DW4/3-1]
gi|115363289|gb|EAU62446.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps)
[Stigmatella aurantiaca DW4/3-1]
gi|309394474|gb|ADO71933.1| Geranylgeranyl diphosphate synthase [Stigmatella aurantiaca
DW4/3-1]
Length = 312
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 119/294 (40%), Positives = 173/294 (58%), Gaps = 14/294 (4%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIH--KAMRYSLLAGGKRVRPLLCIASCELV 118
+ F + + + V +ALDE PP H A+R +LLA GKR+RP+LC+ +CE V
Sbjct: 16 SIDFRRRLHERQQLVARALDEHF---PPGAGHLTAAIREALLADGKRLRPILCLEACEWV 72
Query: 119 GGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLS 178
GG A+PAACALEMIH M+L+HDDLP +D+ E R +PA H+V GE+ AILAGDALL
Sbjct: 73 GGSVKAALPAACALEMIHKMTLVHDDLPAMDDAETRNGRPALHKVHGEALAILAGDALLV 132
Query: 179 LALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
A +A + GV +RV AI +C A+G GL G+ +D+ S+ + V+ ++L+++H
Sbjct: 133 HAFGLLA-STRGVPAERVTVAIRRLCQALGTTGLAGGQALDVLSQTEGVTPEKLDHVHTW 191
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KTA E A+V GA +GG +A +VE + Y +G FQ+ DD+LD + +E GK G+
Sbjct: 192 KTASFFEVAIVIGAEMGGADASQVEALARYGMLLGRAFQISDDLLD---ARDEKGKVEGE 248
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
Y +L G+E A+ ELL QA+ +A + L + + R
Sbjct: 249 -----VTNYVQLHGVEGARRKLRELLNQAVSSIASVKGGDIQLLAGITELVWER 297
>gi|126653065|ref|ZP_01725200.1| YqiD [Bacillus sp. B14905]
gi|126590166|gb|EAZ84290.1| YqiD [Bacillus sp. B14905]
Length = 293
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 114/270 (42%), Positives = 162/270 (60%), Gaps = 3/270 (1%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
+ PV + +M YSL AGGKR+RPL +A EL + + +E+IHT SLIHDD
Sbjct: 27 IDAPVDLKDSMLYSLKAGGKRIRPLFVLAVLELYQKNLQDGLIVGSVIEIIHTYSLIHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMC 204
LP +DND+ RR KP +H+V+GE+ A LAGDAL +LA +A V+ ++ + + +
Sbjct: 87 LPSMDNDDFRRGKPTNHKVYGEALATLAGDALNTLAFGILAR--MEVTAEKRIELVQLLS 144
Query: 205 SAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVER 264
A G EG+V G+ +D+ E + + L ELE +HV+KT LL ++ GAV+ + +
Sbjct: 145 VAAGAEGMVGGQVLDMEGEQRQLDLTELEQVHVNKTGALLRFSIEAGAVLADASKQDRAT 204
Query: 265 VRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELL 324
++ YA IGL FQ+ DDILD+ ++EELGKTAGKD+AS K+TYP L+ + AK E
Sbjct: 205 LKEYAHHIGLAFQIQDDILDIEGTTEELGKTAGKDVASDKSTYPALLTLNGAKEKLAEHY 264
Query: 325 GQAIEELAYFEASKAAPLYFLANYIASRQN 354
AI L A+ L A YI R+N
Sbjct: 265 QHAINALDQLPID-ASLLRDFAAYIVHRKN 293
>gi|299537767|ref|ZP_07051056.1| geranyltranstransferase [Lysinibacillus fusiformis ZC1]
gi|298726746|gb|EFI67332.1| geranyltranstransferase [Lysinibacillus fusiformis ZC1]
Length = 293
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 119/294 (40%), Positives = 171/294 (58%), Gaps = 13/294 (4%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
T EE M EQ++ P + ++M YSL AGGKR+RPL +A EL
Sbjct: 13 TPQIEETMFSLVEQID----------APADLKESMLYSLKAGGKRIRPLFVLAVLELYRE 62
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
+ + +E+IHT SLIHDDLP +DND+ RR KP +H+V+GE+ A LAGDAL +LA
Sbjct: 63 NLQDGLIVGSVIEIIHTYSLIHDDLPSMDNDDFRRGKPTNHKVYGEALATLAGDALNTLA 122
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKT 240
+A ++ ++ + + + A G EG+V G+ +D+ E + ++L ELE +HV+KT
Sbjct: 123 FGILAR--MDIAAEKRIELVQLLSIAAGAEGMVGGQVLDMEGEQRQLNLAELEQVHVNKT 180
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
LL ++ GAV+ +A + ++ YA IGL FQ+ DDILD+ ++EELGKTAGKD+
Sbjct: 181 GALLRFSIEAGAVLADVSAQDRATLKEYAHHIGLAFQIQDDILDIEGTTEELGKTAGKDV 240
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
AS K+TYP L+ +E AK E AI L + L A YI R+N
Sbjct: 241 ASDKSTYPALLTLEGAKEKLAEHYQHAINALDQLPID-VSLLRDFAAYIVHRKN 293
>gi|402303522|ref|ZP_10822615.1| putative geranyltranstransferase [Selenomonas sp. FOBRC9]
gi|400378360|gb|EJP31217.1| putative geranyltranstransferase [Selenomonas sp. FOBRC9]
Length = 295
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 116/276 (42%), Positives = 175/276 (63%), Gaps = 4/276 (1%)
Query: 79 LDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTM 138
LD +L K+ +M YSL+AGGKR+RP+L +A+ + VG D + + AACALEMIHT
Sbjct: 24 LDRTDILDD--KLRASMAYSLMAGGKRLRPILLMAAADAVGADGTKFITAACALEMIHTY 81
Query: 139 SLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVR 198
SLIHDDLP +DND+ RR K +H+ + E TAILAGDALL+LA + + V +R++R
Sbjct: 82 SLIHDDLPAMDNDDYRRGKLTNHKAYDEGTAILAGDALLTLAFTMI-LRQQDVPAERLLR 140
Query: 199 AIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGN 258
+ EM A G EG+V G+ +D+ +E + +S++EL +H+ KT L AA+ GA++ G +
Sbjct: 141 VVDEMSRAAGAEGMVGGQMLDLEAENRRISMEELRRVHMGKTGALFRAALRSGAILAGAS 200
Query: 259 AIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKS 318
++ + YA GL FQ+ DDILDV ++E++GK G D + K+TY L ++ A+S
Sbjct: 201 EQQLAALTAYADHFGLAFQITDDILDVIGTAEDIGKPVGSDEKNHKSTYVTLTSLDEAQS 260
Query: 319 FAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A + + +A++ L F +AA L L Y+ R+
Sbjct: 261 LARQTVERAVDALHIF-GDEAAFLRELVLYLVRRKQ 295
>gi|34763574|ref|ZP_00144509.1| Dimethylallyltransferase; Geranyltranstransferase; Geranylgeranyl
pyrophosphate synthetase [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|27886763|gb|EAA23901.1| Dimethylallyltransferase; Geranyltranstransferase; Geranylgeranyl
pyrophosphate synthetase [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
Length = 297
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 116/293 (39%), Positives = 170/293 (58%), Gaps = 3/293 (1%)
Query: 64 FEEYMIRKAEQVNKALD-EAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
F+ Y+ K + L E L P I K M Y+ L GGKR+RP L A+ EL+ +
Sbjct: 4 FQVYLKEKTDFFETELKRELKELSYPETIAKGMEYATLNGGKRLRPFLLFATLELLNENI 63
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
+ +A ALEMIH+ SL+HDDLP LDND+ RR K +H+VFGE+ IL GD+LL+ A
Sbjct: 64 KKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFY 123
Query: 183 HVAV-NIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
++ N+ +S +++V I++ G+ G++ G+ +DI SE K + L+ L+YIH HKT
Sbjct: 124 VLSQKNLELLSSEQIVNIISKTSEYAGINGMIGGQMIDIESENKKIGLETLKYIHSHKTG 183
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
KL++ + +I + + + YA IGL FQV DDILDV + EELGK G D+
Sbjct: 184 KLIKLPIEIACIIADLEKDKRKVLEEYADLIGLAFQVKDDILDVEGTFEELGKPVGSDVD 243
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELA-YFEASKAAPLYFLANYIASRQ 353
KATYP ++G+E +K + + +A E + F K L LA++I R
Sbjct: 244 LHKATYPSILGMEESKKILNDTVEKAKEIIKNKFRDEKGKVLISLADFIKDRN 296
>gi|77461227|ref|YP_350734.1| farnesyl-diphosphate synthase [Pseudomonas fluorescens Pf0-1]
gi|77385230|gb|ABA76743.1| geranyltranstransferase [Pseudomonas fluorescens Pf0-1]
Length = 295
Score = 207 bits (526), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 128/294 (43%), Positives = 183/294 (62%), Gaps = 9/294 (3%)
Query: 67 YMIRKAEQVNKALDEAVVLQPPV----KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
Y +VN AL+ + P+ ++++AMRYS++ GGKRVRPLL A+CE +GG
Sbjct: 5 YSATSQARVNAALE--TLFNAPLPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGKA 62
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 63 EQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAFS 122
Query: 183 HVA-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
+ ++ +S D ++ + + A G G+V G+ +D+ S G + K LE +H HKT
Sbjct: 123 ALLDPRLSDLSADIRLQQVTALAHAAGPAGMVGGQAIDLGSVGLKLDQKALEQMHRHKTG 182
Query: 242 KLLEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
L+E +V GA+ G E++ ++ YA+ IGL FQV DDILDV +E LGK G D+
Sbjct: 183 ALIEVSVKLGALASGCAEKDELKSLQTYAQAIGLAFQVQDDILDVESDTETLGKRQGADI 242
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A K TYP L+G++ AK++A EL QA+ L F+A+ A PL LA YI R+N
Sbjct: 243 ARDKPTYPALLGLDAAKAYALELRDQALHALRPFDAA-AEPLRDLARYIVDRRN 295
>gi|422639114|ref|ZP_16702544.1| polyprenyl synthetase [Pseudomonas syringae Cit 7]
gi|330951508|gb|EGH51768.1| polyprenyl synthetase [Pseudomonas syringae Cit 7]
Length = 295
Score = 207 bits (526), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 128/292 (43%), Positives = 183/292 (62%), Gaps = 5/292 (1%)
Query: 67 YMIRKAEQVNKALDEAVVLQPPV--KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW 124
Y + +VN ALD P ++++AMRYS++ GGKRVRPLL A+CE +GG
Sbjct: 5 YQAQSQTRVNAALDALFKAPGPELERLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAED 64
Query: 125 AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH- 183
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 65 ANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTAL 124
Query: 184 VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
+A ++ + ++ + + +A G G+V G+ +D+ S G + LEY+H HKT L
Sbjct: 125 LAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAGLEYMHRHKTGAL 184
Query: 244 LEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
+EA+V GA+ G + ++ ++ YAR IGL FQV DDILDV + LGK G D+A
Sbjct: 185 IEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADIAR 244
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TYP L+G+E AK +A EL QA++ L+ F+A+ A PL LA YI R++
Sbjct: 245 DKPTYPALLGLEAAKHYALELRDQALQALSPFDAA-AEPLRQLARYIVERRH 295
>gi|289672640|ref|ZP_06493530.1| polyprenyl synthetase [Pseudomonas syringae pv. syringae FF5]
Length = 295
Score = 207 bits (526), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 128/292 (43%), Positives = 183/292 (62%), Gaps = 5/292 (1%)
Query: 67 YMIRKAEQVNKALDEAVVLQPPV--KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW 124
Y + +VN ALD P ++++AMRYS++ GGKRVRPLL A+CE +GG
Sbjct: 5 YQAQSQTRVNAALDGLFKAPGPELERLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAED 64
Query: 125 AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH- 183
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 65 ANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTAL 124
Query: 184 VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
+A ++ + ++ + + +A G G+V G+ +D+ S G + LEY+H HKT L
Sbjct: 125 LAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGAL 184
Query: 244 LEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
+EA+V GA+ G + ++ ++ YAR IGL FQV DDILDV + LGK G D+A
Sbjct: 185 IEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADIAR 244
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TYP L+G+E AK +A EL QA++ L+ F+A+ A PL LA YI R++
Sbjct: 245 DKPTYPALLGLEAAKHYALELRDQALQALSPFDAA-AEPLRQLARYIVERRH 295
>gi|359474991|ref|XP_003631563.1| PREDICTED: geranylgeranyl pyrophosphate synthase-related protein,
chloroplastic-like isoform 1 [Vitis vinifera]
Length = 341
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 115/296 (38%), Positives = 171/296 (57%), Gaps = 15/296 (5%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLA-GGKRVRPLLCIASCELVGG 120
F Y ++N L+EA+ ++ P +I++AMRYS+LA GGKR P++C+A CEL GG
Sbjct: 48 FDLRSYWTTLISEINTKLEEAIPVKYPQQIYEAMRYSVLAKGGKRAPPVMCVAVCELFGG 107
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
D A P ACALEM+H SLIHDDLP +D+D RR +P++H V+G AILAGDAL L
Sbjct: 108 DRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLG 167
Query: 181 LEHVAVNIAG--VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
H+ + V +++R IAE+ ++G G+ AG+F+D+ EG S ++++
Sbjct: 168 FRHIVSHTPSHLVPEGQLIRVIAEIARSVGSTGMAAGQFLDL--EGAPNS---VDFVQRK 222
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
K ++ E + VCG +GG ++ R+R Y R +G+L+QVVDD+L SEE +
Sbjct: 223 KFGEMAECSAVCGGFLGGAADDDILRLRRYGRAVGMLYQVVDDVLKAKTKSEEDEEK--- 279
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFE--ASKAAPLYFLANYIASR 352
+Y + G+E A A EL +A EL+ F+ PLY ++ A R
Sbjct: 280 --KKKGKSYVDVYGMEKAMEVAEELRAKAKRELSGFDKYGDSVVPLYSFVDFAAER 333
>gi|424735521|ref|ZP_18163984.1| geranyltranstransferase [Lysinibacillus fusiformis ZB2]
gi|422950178|gb|EKU44547.1| geranyltranstransferase [Lysinibacillus fusiformis ZB2]
Length = 293
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 119/294 (40%), Positives = 171/294 (58%), Gaps = 13/294 (4%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
T EE M EQ++ P + ++M YSL AGGKR+RPL +A EL
Sbjct: 13 TPQIEETMFSLVEQID----------APADLKESMLYSLKAGGKRIRPLFVLAILELYRE 62
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
+ + +E+IHT SLIHDDLP +DND+ RR KP +H+V+GE+ A LAGDAL +LA
Sbjct: 63 NLQDGLIVGSVIEIIHTYSLIHDDLPSMDNDDFRRGKPTNHKVYGEALATLAGDALNTLA 122
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKT 240
+A ++ ++ + + + A G EG+V G+ +D+ E + ++L ELE +HV+KT
Sbjct: 123 FGILAR--MDIAAEKRIELVQLLSIAAGAEGMVGGQVLDMEGEQRQLNLAELEQVHVNKT 180
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
LL ++ GAV+ +A + ++ YA IGL FQ+ DDILD+ ++EELGKTAGKD+
Sbjct: 181 GALLRFSIEAGAVLADVSAQDRATLKEYAHHIGLAFQIQDDILDIEGTTEELGKTAGKDV 240
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
AS K+TYP L+ +E AK E AI L + L A YI R+N
Sbjct: 241 ASDKSTYPALLTLEGAKEKLAEHYQHAINALDQLPID-VSLLRDFAAYIVHRKN 293
>gi|238019305|ref|ZP_04599731.1| hypothetical protein VEIDISOL_01169 [Veillonella dispar ATCC 17748]
gi|237864004|gb|EEP65294.1| hypothetical protein VEIDISOL_01169 [Veillonella dispar ATCC 17748]
Length = 292
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 116/298 (38%), Positives = 176/298 (59%), Gaps = 14/298 (4%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVK----IHKAMRYSLLAGGKRVRPLLCIASCELVG 119
F++Y+ + + + L E VL P + ++++M YSL+ GGKR+RP+L A E++
Sbjct: 2 FKDYLASSKQHIEQWLGE--VLTSPNREFKPLYESMNYSLMQGGKRIRPILSKAVLEMLH 59
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
D + CA+E IHT SL+HDDLP +DND+ RR +H+V+GE AILAGD LL+
Sbjct: 60 KDPADYKEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGMAILAGDGLLTY 119
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A + + N + +++ AI + +A G EG+V G+ D+ SE K + L+EL+ +H K
Sbjct: 120 AFQLMTANETATAQEKL-DAIQCVATAAGPEGMVGGQAFDMLSEDKHIPLEELKVLHRGK 178
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T L A+V G ++G + + YA C+GLLFQ+ DDILDVT + EELGKT G D
Sbjct: 179 TGALFNASVELGLILGNADTATRTALMEYANCLGLLFQITDDILDVTGTIEELGKTPGSD 238
Query: 300 LASGKATYPKLMGIENAK---SFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K+TY L+G++ AK S G+ A+ ++Y + AA L +Y+ R N
Sbjct: 239 IRQHKSTYVSLLGLDEAKNQASLVGKQAHDALNSVSYDTSILAA----LIDYLLERTN 292
>gi|225873275|ref|YP_002754734.1| geranylgeranyl diphosphate synthase [Acidobacterium capsulatum ATCC
51196]
gi|225791637|gb|ACO31727.1| geranylgeranyl diphosphate synthase [Acidobacterium capsulatum ATCC
51196]
Length = 300
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 116/273 (42%), Positives = 166/273 (60%), Gaps = 11/273 (4%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAA-----CALEMIHTMSLIH 142
P IH+A+R+S AGGKR+RP+L + + + D A+PA A+EM+HT SLIH
Sbjct: 33 PSSIHRAIRHSTFAGGKRLRPVLAMEAARTLRRDR--ALPAGVEDLGAAIEMLHTYSLIH 90
Query: 143 DDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVA-VNIAGVSPDRVVRAIA 201
DDLP LDND+ RR KP H VFGE+ AILAGDAL +LA + +A + + ++R IA
Sbjct: 91 DDLPALDNDDLRRGKPTCHVVFGEAIAILAGDALQTLAYQTLAQLRCPAPATVEIIRLIA 150
Query: 202 EMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIE 261
E VEG++ G+ +D+ EG + + ++ IH KT L+ ++V G V G +
Sbjct: 151 EATGT--VEGMIGGQVLDLEGEGTRPTAESVDAIHRAKTGALIRVSIVTGGVYAGATPED 208
Query: 262 VERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAG 321
VER+ + R GL FQ+VDD+LD+T+ S LGKTAGKDLA+ KAT+P + GIE ++ A
Sbjct: 209 VERLTIFGRKAGLAFQIVDDVLDMTQDSAHLGKTAGKDLATDKATWPAVFGIEASRRDAA 268
Query: 322 ELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L+ +A L + A L +A ++ R N
Sbjct: 269 RLIDEAFAALEPY-GPAADGLKTVARFLVERTN 300
>gi|331269445|ref|YP_004395937.1| polyprenyl synthetase [Clostridium botulinum BKT015925]
gi|329125995|gb|AEB75940.1| Polyprenyl synthetase [Clostridium botulinum BKT015925]
Length = 289
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 104/245 (42%), Positives = 163/245 (66%), Gaps = 3/245 (1%)
Query: 91 IHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDN 150
++ +M+YS+ GGKR+RP+L +++ + + MP ACA+EMIHT SLIHDDLP +DN
Sbjct: 28 LYDSMKYSIEVGGKRIRPILMLSTYSIYKDNYKDIMPMACAIEMIHTYSLIHDDLPGMDN 87
Query: 151 DERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCS-AMGV 209
D+ RR KP +H+VFGE+ AILAGD LL+ A+ +V N + ++ D+V +++ S A G
Sbjct: 88 DDLRRGKPTNHKVFGEAIAILAGDGLLNEAM-NVMFNYS-LTHDKVALMASKVISEAAGA 145
Query: 210 EGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYA 269
EG++ G+ VDI SEG+ +S+ +L+Y+H +KT +L++++++ GA++GG + +E + +
Sbjct: 146 EGMIGGQVVDIISEGQKISIDKLKYMHKNKTGQLIKSSIIAGAILGGASKENLEILDEFG 205
Query: 270 RCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIE 329
+GL FQ+ DDILDV S+ LGK KD + K T+ G+E K EL Q I+
Sbjct: 206 SKLGLAFQIKDDILDVIGDSKVLGKEVHKDDENNKTTFISCFGLEKCKELCVELTEQCIK 265
Query: 330 ELAYF 334
L+Y
Sbjct: 266 LLSYI 270
>gi|398977331|ref|ZP_10687048.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM25]
gi|398138075|gb|EJM27105.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM25]
Length = 295
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 128/294 (43%), Positives = 183/294 (62%), Gaps = 9/294 (3%)
Query: 67 YMIRKAEQVNKALDEAVVLQPPV----KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
Y +VN AL+ + P+ ++++AMRYS++ GGKRVRPLL A+CE +GG
Sbjct: 5 YSATSQARVNAALE--TLFNAPLPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGKA 62
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 63 EQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAFS 122
Query: 183 HVA-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
+ ++ +S D ++ + + A G G+V G+ +D+ S G + K LE +H HKT
Sbjct: 123 ALLDPRLSDLSADIRLQQVTALAHAAGPAGMVGGQAIDLGSVGLKLDQKALEQMHRHKTG 182
Query: 242 KLLEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
L+E +V GA+ G E++ ++ YA+ IGL FQV DDILDV +E LGK G D+
Sbjct: 183 ALIEVSVKLGALASGRAERDELKSLQTYAQAIGLAFQVQDDILDVESDTETLGKRQGADI 242
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A K TYP L+G++ AK++A EL QA+ L F+A+ A PL LA YI R+N
Sbjct: 243 ARDKPTYPALLGLDAAKAYALELRDQALHALRPFDAA-AEPLRDLARYIVDRRN 295
>gi|403380864|ref|ZP_10922921.1| polyprenyl synthetase [Paenibacillus sp. JC66]
Length = 301
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 118/286 (41%), Positives = 172/286 (60%), Gaps = 12/286 (4%)
Query: 73 EQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACAL 132
EQ+ L A + P+K +AM YSL AGGKR+RP+L +A+ E +GG+ A+P ACA+
Sbjct: 20 EQLRHFLPSAWDVPQPLK--EAMAYSLHAGGKRLRPILVLAAAESLGGNREAALPIACAV 77
Query: 133 EMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNI---A 189
EM+HT SLIHDDLP LDND+ RR P +H+V GE+ AILAGDALL+ A +VA + +
Sbjct: 78 EMVHTYSLIHDDLPALDNDDFRRGMPTNHKVHGEAMAILAGDALLTHAF-YVASDACLRS 136
Query: 190 GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVV 249
G++P++ + I + G G+V G+ D+ E L+EL+YIH HKT L+ +V
Sbjct: 137 GIAPEQGLALIRDFAEFAGARGMVGGQVADMVGEQGITRLEELQYIHTHKTGDLIVFSVK 196
Query: 250 CGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPK 309
G + N +++ + + R IG+ FQ++DDILD+T ++LGK D K TYP
Sbjct: 197 AGGRLANANEEQMKALEKFGRSIGMAFQILDDILDITGDEQKLGKPVKSDEKQQKVTYPY 256
Query: 310 LMGIENAKSFAGELL---GQAIEELAYFEASKAAPLYFLANYIASR 352
+G+E +K E QAI + A+F + L LA+Y+ R
Sbjct: 257 FIGLEESKKLVREHTEAGKQAINQ-AHFPFPQR--LLELADYMMDR 299
>gi|153939221|ref|YP_001391205.1| geranyltranstransferase [Clostridium botulinum F str. Langeland]
gi|152935117|gb|ABS40615.1| geranyltranstransferase [Clostridium botulinum F str. Langeland]
Length = 290
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 105/242 (43%), Positives = 154/242 (63%), Gaps = 1/242 (0%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLD 149
KI++AM YSL AGGKR+RP+L + + L D AMP A A+EMIHT SLIHDDLP +D
Sbjct: 28 KIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMD 87
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGV 209
ND+ RR KP +H++FGE+ AILAGDALL+ A+ ++ + + ++ ++A + A GV
Sbjct: 88 NDDLRRGKPTNHKIFGEAIAILAGDALLNEAM-NIMFEYSLKNGEKALKACYTIAKAAGV 146
Query: 210 EGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYA 269
+G++ G+ VDI SE K +SL EL Y+H KT L++A+++ GA++G ++E + Y
Sbjct: 147 DGMIGGQVVDILSEDKSISLDELYYMHKKKTGALIKASILAGAILGSATYTDIELLGEYG 206
Query: 270 RCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIE 329
+GL FQ+ DDILDV + LGK D + K T+ K+ GIE E+ + +
Sbjct: 207 DNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIEKCNELCTEMTNKCFD 266
Query: 330 EL 331
L
Sbjct: 267 IL 268
>gi|229123698|ref|ZP_04252893.1| Geranyltranstransferase [Bacillus cereus 95/8201]
gi|228659833|gb|EEL15478.1| Geranyltranstransferase [Bacillus cereus 95/8201]
Length = 296
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 117/271 (43%), Positives = 174/271 (64%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR+RPLL A+ + + + + AACALEMIHT SL+HDD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFDKERNLGVGAACALEMIHTYSLVHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + + A +S ++ VR + E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAEKKVRLVLEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+V G+ D+ +EGK +++ ELEYIH HKT KLLE AV+ G+++ + E
Sbjct: 147 AKAAGPEGMVGGQVADMKAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++ +A+ IGL FQ+ DDILDV + EE+GK G D+++ K+TY L ++ AK E
Sbjct: 207 KLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILDET 266
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A + + + + L + + IA R N
Sbjct: 267 IAKAKDAIGSLQL-QDEYLLSICDLIAKRNN 296
>gi|229174855|ref|ZP_04302375.1| Geranyltranstransferase [Bacillus cereus MM3]
gi|423478323|ref|ZP_17455038.1| hypothetical protein IEO_03781 [Bacillus cereus BAG6X1-1]
gi|228608523|gb|EEK65825.1| Geranyltranstransferase [Bacillus cereus MM3]
gi|402428485|gb|EJV60582.1| hypothetical protein IEO_03781 [Bacillus cereus BAG6X1-1]
Length = 296
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 113/244 (46%), Positives = 164/244 (67%), Gaps = 1/244 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR+RPLL A+ + G + + + AACALEMIHT SL+HDD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGIGAACALEMIHTYSLVHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + + A +S ++ VR + E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+V G+ D+ +EGK +++ ELEYIH HKT KLLE AV+ G+++ + E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++ +A+ IGL FQ+ DDILDV + EE+GK G D+++ K+TY L ++ AK E
Sbjct: 207 KLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILEET 266
Query: 324 LGQA 327
+ +A
Sbjct: 267 IAKA 270
>gi|167634585|ref|ZP_02392905.1| geranyltranstransferase [Bacillus anthracis str. A0442]
gi|254741328|ref|ZP_05199015.1| geranyltranstransferase [Bacillus anthracis str. Kruger B]
gi|167530037|gb|EDR92772.1| geranyltranstransferase [Bacillus anthracis str. A0442]
Length = 296
Score = 207 bits (526), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 117/271 (43%), Positives = 174/271 (64%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR+RPLL A+ + + + + AACALEMIHT SL+HDD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFDKERNLGVGAACALEMIHTYSLVHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + + A +S ++ VR + E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYRQKEISAEKKVRLVLEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+V G+ D+ +EGK +++ ELEYIH HKT KLLE AV+ G+++ + E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++ +A+ IGL FQ+ DDILDV + EE+GK G D+++ K+TY L ++ AK E
Sbjct: 207 KLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILDET 266
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A + + + + L + + IA R N
Sbjct: 267 IAKAKDAIGSLQL-QDEYLLSICDLIAKRNN 296
>gi|422630479|ref|ZP_16695676.1| polyprenyl synthetase [Pseudomonas syringae pv. pisi str. 1704B]
gi|330939927|gb|EGH43133.1| polyprenyl synthetase [Pseudomonas syringae pv. pisi str. 1704B]
Length = 295
Score = 207 bits (526), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 127/292 (43%), Positives = 182/292 (62%), Gaps = 5/292 (1%)
Query: 67 YMIRKAEQVNKALDEAVVLQPPV--KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW 124
Y + +VN ALD P ++++AMRYS++ GGKRVRPLL A+CE +GG
Sbjct: 5 YQAQSQTRVNAALDGLFKAPGPELERLYQAMRYSVMNGGKRVRPLLAYAACEALGGVAED 64
Query: 125 AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV 184
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA +
Sbjct: 65 ANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTAL 124
Query: 185 AV-NIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
++ + ++ + + +A G G+V G+ +D+ S G + LEY+H HKT L
Sbjct: 125 LTPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGAL 184
Query: 244 LEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
+EA+V GA+ G + ++ ++ YAR IGL FQV DDILDV + LGK G D+A
Sbjct: 185 IEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADIAR 244
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TYP L+G+E AK +A EL QA++ L+ F+A+ A PL LA YI R++
Sbjct: 245 DKPTYPALLGLEAAKHYALELRDQALQALSPFDAA-AEPLRQLARYIVERRH 295
>gi|30264253|ref|NP_846630.1| geranyltranstransferase [Bacillus anthracis str. Ames]
gi|47529696|ref|YP_021045.1| geranyltranstransferase [Bacillus anthracis str. 'Ames Ancestor']
gi|49187080|ref|YP_030332.1| geranyltranstransferase [Bacillus anthracis str. Sterne]
gi|49478571|ref|YP_038239.1| geranyltranstransferase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|52141318|ref|YP_085511.1| geranyltranstransferase [Bacillus cereus E33L]
gi|65321563|ref|ZP_00394522.1| COG0142: Geranylgeranyl pyrophosphate synthase [Bacillus anthracis
str. A2012]
gi|118479369|ref|YP_896520.1| farnesyl-diphosphate synthase [Bacillus thuringiensis str. Al
Hakam]
gi|165872980|ref|ZP_02217602.1| geranyltranstransferase [Bacillus anthracis str. A0488]
gi|167638604|ref|ZP_02396880.1| geranyltranstransferase [Bacillus anthracis str. A0193]
gi|170687399|ref|ZP_02878616.1| geranyltranstransferase [Bacillus anthracis str. A0465]
gi|170709043|ref|ZP_02899473.1| geranyltranstransferase [Bacillus anthracis str. A0389]
gi|177654844|ref|ZP_02936601.1| geranyltranstransferase [Bacillus anthracis str. A0174]
gi|190565928|ref|ZP_03018847.1| geranyltranstransferase [Bacillus anthracis str. Tsiankovskii-I]
gi|196034877|ref|ZP_03102284.1| geranyltranstransferase [Bacillus cereus W]
gi|196046422|ref|ZP_03113648.1| geranyltranstransferase [Bacillus cereus 03BB108]
gi|218905314|ref|YP_002453148.1| geranyltranstransferase [Bacillus cereus AH820]
gi|225866160|ref|YP_002751538.1| geranyltranstransferase [Bacillus cereus 03BB102]
gi|227816954|ref|YP_002816963.1| geranyltranstransferase [Bacillus anthracis str. CDC 684]
gi|228916814|ref|ZP_04080379.1| Geranyltranstransferase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228929224|ref|ZP_04092251.1| Geranyltranstransferase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228947895|ref|ZP_04110182.1| Geranyltranstransferase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229186421|ref|ZP_04313585.1| Geranyltranstransferase [Bacillus cereus BGSC 6E1]
gi|229601140|ref|YP_002868472.1| geranyltranstransferase [Bacillus anthracis str. A0248]
gi|254683942|ref|ZP_05147802.1| geranyltranstransferase [Bacillus anthracis str. CNEVA-9066]
gi|254721777|ref|ZP_05183566.1| geranyltranstransferase [Bacillus anthracis str. A1055]
gi|254736290|ref|ZP_05193996.1| geranyltranstransferase [Bacillus anthracis str. Western North
America USA6153]
gi|254754038|ref|ZP_05206073.1| geranyltranstransferase [Bacillus anthracis str. Vollum]
gi|254757909|ref|ZP_05209936.1| geranyltranstransferase [Bacillus anthracis str. Australia 94]
gi|301055671|ref|YP_003793882.1| geranyltranstransferase [Bacillus cereus biovar anthracis str. CI]
gi|376268075|ref|YP_005120787.1| geranyltranstransferase [Bacillus cereus F837/76]
gi|386738069|ref|YP_006211250.1| polyprenyl synthetase [Bacillus anthracis str. H9401]
gi|421506438|ref|ZP_15953361.1| polyprenyl synthetase [Bacillus anthracis str. UR-1]
gi|421638259|ref|ZP_16078855.1| polyprenyl synthetase [Bacillus anthracis str. BF1]
gi|423550076|ref|ZP_17526403.1| hypothetical protein IGW_00707 [Bacillus cereus ISP3191]
gi|30258898|gb|AAP28116.1| geranyltranstransferase [Bacillus anthracis str. Ames]
gi|47504844|gb|AAT33520.1| geranyltranstransferase [Bacillus anthracis str. 'Ames Ancestor']
gi|49181007|gb|AAT56383.1| geranyltranstransferase [Bacillus anthracis str. Sterne]
gi|49330127|gb|AAT60773.1| geranyltranstransferase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|51974787|gb|AAU16337.1| geranyltranstransferase [Bacillus cereus E33L]
gi|118418594|gb|ABK87013.1| farnesyl-diphosphate synthase [Bacillus thuringiensis str. Al
Hakam]
gi|164711263|gb|EDR16818.1| geranyltranstransferase [Bacillus anthracis str. A0488]
gi|167513452|gb|EDR88822.1| geranyltranstransferase [Bacillus anthracis str. A0193]
gi|170126070|gb|EDS94967.1| geranyltranstransferase [Bacillus anthracis str. A0389]
gi|170668594|gb|EDT19340.1| geranyltranstransferase [Bacillus anthracis str. A0465]
gi|172080505|gb|EDT65591.1| geranyltranstransferase [Bacillus anthracis str. A0174]
gi|190562847|gb|EDV16813.1| geranyltranstransferase [Bacillus anthracis str. Tsiankovskii-I]
gi|195992416|gb|EDX56377.1| geranyltranstransferase [Bacillus cereus W]
gi|196022892|gb|EDX61573.1| geranyltranstransferase [Bacillus cereus 03BB108]
gi|218538297|gb|ACK90695.1| geranyltranstransferase [Bacillus cereus AH820]
gi|225790308|gb|ACO30525.1| geranyltranstransferase [Bacillus cereus 03BB102]
gi|227007089|gb|ACP16832.1| geranyltranstransferase [Bacillus anthracis str. CDC 684]
gi|228597048|gb|EEK54704.1| Geranyltranstransferase [Bacillus cereus BGSC 6E1]
gi|228811882|gb|EEM58216.1| Geranyltranstransferase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228830514|gb|EEM76124.1| Geranyltranstransferase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228843001|gb|EEM88084.1| Geranyltranstransferase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|229265548|gb|ACQ47185.1| geranyltranstransferase [Bacillus anthracis str. A0248]
gi|300377840|gb|ADK06744.1| geranyltranstransferase [Bacillus cereus biovar anthracis str. CI]
gi|364513875|gb|AEW57274.1| Geranyltranstransferase (farnesyldiphosphate synthase) [Bacillus
cereus F837/76]
gi|384387921|gb|AFH85582.1| Polyprenyl synthetase [Bacillus anthracis str. H9401]
gi|401189692|gb|EJQ96742.1| hypothetical protein IGW_00707 [Bacillus cereus ISP3191]
gi|401823431|gb|EJT22578.1| polyprenyl synthetase [Bacillus anthracis str. UR-1]
gi|403394685|gb|EJY91925.1| polyprenyl synthetase [Bacillus anthracis str. BF1]
Length = 296
Score = 207 bits (526), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 117/271 (43%), Positives = 174/271 (64%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR+RPLL A+ + + + + AACALEMIHT SL+HDD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFDKERNLGVGAACALEMIHTYSLVHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + + A +S ++ VR + E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAEKKVRLVLEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+V G+ D+ +EGK +++ ELEYIH HKT KLLE AV+ G+++ + E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++ +A+ IGL FQ+ DDILDV + EE+GK G D+++ K+TY L ++ AK E
Sbjct: 207 KLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILDET 266
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A + + + + L + + IA R N
Sbjct: 267 IAKAKDAIGSLQL-QDEYLLSICDLIAKRNN 296
>gi|295706547|ref|YP_003599622.1| geranyltranstransferase [Bacillus megaterium DSM 319]
gi|294804206|gb|ADF41272.1| geranyltranstransferase [Bacillus megaterium DSM 319]
Length = 298
Score = 206 bits (525), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 115/256 (44%), Positives = 166/256 (64%), Gaps = 2/256 (0%)
Query: 64 FEEYMIRKAEQVNKALDEAV-VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
+EY+ ++V L E V L PV + ++M YSL AGGKR+RP+L A+ G DE
Sbjct: 7 LKEYISFTKDRVETRLPEVVKALHAPVNLKESMLYSLTAGGKRLRPVLLFATLHAFGKDE 66
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
S + ACA+EMIHT SLIHDDLP +D+D+ RR KP +H+V+GE+TAILAGDALL+ + +
Sbjct: 67 SMGLETACAVEMIHTYSLIHDDLPSMDDDDLRRGKPTNHKVYGEATAILAGDALLTNSFQ 126
Query: 183 HVA-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
++ ++ ++ I E+ A G EG+++G+ D+ E K ++L ELEYIH+HKT
Sbjct: 127 LISEAAHPEITSHMKLQLITELVKASGTEGMISGQVADMEGEKKQLTLDELEYIHLHKTG 186
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
KLL V GA++ ++ E + +++ +GL FQ+ DDILDV S E+LGK G D
Sbjct: 187 KLLGFCVKAGAILAKATPLQQELLEEFSKHVGLAFQIQDDILDVEGSEEKLGKPIGSDTE 246
Query: 302 SGKATYPKLMGIENAK 317
+ K TYP L+G+E AK
Sbjct: 247 NEKTTYPSLLGMEAAK 262
>gi|294501200|ref|YP_003564900.1| geranyltranstransferase [Bacillus megaterium QM B1551]
gi|294351137|gb|ADE71466.1| geranyltranstransferase [Bacillus megaterium QM B1551]
Length = 298
Score = 206 bits (525), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 115/256 (44%), Positives = 166/256 (64%), Gaps = 2/256 (0%)
Query: 64 FEEYMIRKAEQVNKALDEAV-VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
+EY+ ++V L E V L PV + ++M YSL AGGKR+RP+L A+ G DE
Sbjct: 7 LKEYISFTKDRVETRLPEVVKALHAPVNLKESMLYSLTAGGKRLRPVLLFATLHAFGKDE 66
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
S + ACA+EMIHT SLIHDDLP +D+D+ RR KP +H+V+GE+TAILAGDALL+ + +
Sbjct: 67 SMGLETACAVEMIHTYSLIHDDLPSMDDDDLRRGKPTNHKVYGEATAILAGDALLTNSFQ 126
Query: 183 HVA-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
++ ++ ++ I E+ A G EG+++G+ D+ E K ++L ELEYIH+HKT
Sbjct: 127 LISEAAHPEITSHMKLQLITELVKASGTEGMISGQVADMEGEKKQLTLDELEYIHLHKTG 186
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
KLL V GA++ ++ E + +++ +GL FQ+ DDILDV S E+LGK G D
Sbjct: 187 KLLGFCVKAGAILAKATPLQQELLEEFSKHVGLAFQIQDDILDVEGSEEKLGKPIGSDTE 246
Query: 302 SGKATYPKLMGIENAK 317
+ K TYP L+G+E AK
Sbjct: 247 NEKTTYPSLLGMEAAK 262
>gi|269797982|ref|YP_003311882.1| polyprenyl synthetase [Veillonella parvula DSM 2008]
gi|269094611|gb|ACZ24602.1| Polyprenyl synthetase [Veillonella parvula DSM 2008]
Length = 292
Score = 206 bits (525), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 115/295 (38%), Positives = 171/295 (57%), Gaps = 8/295 (2%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVK----IHKAMRYSLLAGGKRVRPLLCIASCELVG 119
F++Y+ + + + L E VL P + ++++M YSL+ GGKR+RP+L A E++
Sbjct: 2 FKDYLASSKQNIEQWLGE--VLNSPNQEFEQLYESMNYSLMQGGKRIRPILTKAVLEMLH 59
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
+ + CA+E IHT SL+HDDLP +DND+ RR +H+V+GE AILAGD LL+
Sbjct: 60 KEPADYKEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGLAILAGDGLLTY 119
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A + + N S + + AI + +A G EG+V G+ D+ SE K + L+EL+ +H K
Sbjct: 120 AFQLMTSNTVA-SAQQKLDAIKCVATAAGPEGMVGGQAFDLLSEDKHIPLEELKVLHTGK 178
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T L A+V G ++G N + Y+ C+GLLFQ+ DDILDVT + EELGKT G D
Sbjct: 179 TGALFNASVELGLILGSANKTTRTALMEYSNCLGLLFQITDDILDVTGTIEELGKTPGSD 238
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K+TY L+G+E AK A L+G + + L L +Y+ R N
Sbjct: 239 IRQHKSTYVSLLGLEQAKHQA-YLVGSQAHDALNLVSYDTTILSALIDYLLERTN 292
>gi|237744132|ref|ZP_04574613.1| dimethylallyltransferase [Fusobacterium sp. 7_1]
gi|229431361|gb|EEO41573.1| dimethylallyltransferase [Fusobacterium sp. 7_1]
Length = 297
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/296 (38%), Positives = 172/296 (58%), Gaps = 9/296 (3%)
Query: 64 FEEYMIRKAE----QVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
F+ Y+ K + ++ K L E L P I M Y++L GGKR+RP L + EL+
Sbjct: 4 FQVYLKEKTDFFETELKKELKE---LSYPETIANGMEYAILNGGKRLRPFLLFVTLELLN 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
D + +A ALEMIH+ SL+HDDLP LDND+ RR K +H+VFGE+ IL GD+LL+
Sbjct: 61 EDIKKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTY 120
Query: 180 ALEHVAV-NIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
A ++ N+ +S +++V I++ G+ G++ G+ +DI SE K + L+ L+YIH H
Sbjct: 121 AFYVLSQKNLELLSSEQIVNIISKTSEYAGINGMIGGQMIDIQSENKKIDLETLKYIHSH 180
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT KL++ + +I + E + YA IGL FQV DDILDV + E+LGK G
Sbjct: 181 KTGKLIKLPIEIACIIANVEKDKREVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGS 240
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELA-YFEASKAAPLYFLANYIASRQ 353
D+ KATYP ++G+E +K + + +A + + F K L LA++I R
Sbjct: 241 DVDLHKATYPSILGMEESKKILNDTVEKAKQIIKDKFGDEKGKILISLADFIKDRN 296
>gi|260494283|ref|ZP_05814414.1| dimethylallyltransferase [Fusobacterium sp. 3_1_33]
gi|260198429|gb|EEW95945.1| dimethylallyltransferase [Fusobacterium sp. 3_1_33]
Length = 297
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/296 (38%), Positives = 172/296 (58%), Gaps = 9/296 (3%)
Query: 64 FEEYMIRKAE----QVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
F+ Y+ K + ++ K L E L P I M Y++L GGKR+RP L + EL+
Sbjct: 4 FQVYLKEKTDFFETELKKELKE---LSYPETIANGMEYAILNGGKRLRPFLLFVTLELLN 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
D + +A ALEMIH+ SL+HDDLP LDND+ RR K +H+VFGE+ IL GD+LL+
Sbjct: 61 EDIKKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTY 120
Query: 180 ALEHVAV-NIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
A ++ N+ +S ++V I++ G+ G++ G+ +DI SE K + L+ L+YIH H
Sbjct: 121 AFYVLSQKNLELLSSKQIVNIISKTSEYAGINGMIGGQMIDIESENKKIDLETLKYIHSH 180
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT KL++ ++ +I + E + YA IGL FQV DDILDV + E+LGK G
Sbjct: 181 KTGKLIKLSIEIACIIANVEKDKREVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGS 240
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELA-YFEASKAAPLYFLANYIASRQ 353
D+ KATYP ++G+E +K + +A + + F K L LA++I R+
Sbjct: 241 DVDLHKATYPSILGMEESKKILNNTVEKAKQIIKNKFGEEKGKILISLADFIKDRK 296
>gi|294791863|ref|ZP_06757011.1| geranyltranstransferase [Veillonella sp. 6_1_27]
gi|294457093|gb|EFG25455.1| geranyltranstransferase [Veillonella sp. 6_1_27]
Length = 292
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/295 (38%), Positives = 171/295 (57%), Gaps = 8/295 (2%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVK----IHKAMRYSLLAGGKRVRPLLCIASCELVG 119
F++Y+ + + + L E VL P + ++++M YSL+ GGKR+RP+L A E++
Sbjct: 2 FKDYLASSKQNIEQWLGE--VLNSPNQEFEQLYESMNYSLMQGGKRIRPILTKAVLEMLH 59
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
+ + CA+E IHT SL+HDDLP +DND+ RR +H+V+GE AILAGD LL+
Sbjct: 60 KEPADYKEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGLAILAGDGLLTY 119
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A + + N S + + AI + +A G EG+V G+ D+ SE K + L+EL+ +H K
Sbjct: 120 AFQLMTSNTVA-SAQQKLDAIKCVATAAGPEGMVGGQAFDLLSEDKHIPLEELKVLHTGK 178
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T L A+V G ++G N + Y+ C+GLLFQ+ DDILDVT + EELGKT G D
Sbjct: 179 TGALFNASVELGLILGSANNTTRTALMEYSNCLGLLFQITDDILDVTGTIEELGKTPGSD 238
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K+TY L+G+E AK A L+G + + L L +Y+ R N
Sbjct: 239 IRQHKSTYVSLLGLEQAKHQA-YLVGSQAHDALNLVSYDTTILSALIDYLLERTN 292
>gi|313894537|ref|ZP_07828101.1| geranyltranstransferase [Veillonella sp. oral taxon 158 str. F0412]
gi|313440933|gb|EFR59361.1| geranyltranstransferase [Veillonella sp. oral taxon 158 str. F0412]
Length = 292
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 176/298 (59%), Gaps = 14/298 (4%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVK----IHKAMRYSLLAGGKRVRPLLCIASCELVG 119
F+EY+ + + + L E VL P + ++++M YSL+ GGKR+RP+L A E++
Sbjct: 2 FKEYLAASKQNIEQWLGE--VLTSPNQEFKPLYESMNYSLMQGGKRIRPILSKAVLEMLH 59
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
+ + CA+E IHT SL+HDDLP +DND+ RR +H+V+GE AILAGD LL+
Sbjct: 60 KEPADYKEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGLAILAGDGLLTY 119
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A + + N + +++ AI + +A G EG+V G+ D+ SE K + L+EL+ +H K
Sbjct: 120 AFQLMTANKTATAQEKL-DAIQCVATAAGPEGMVGGQAFDMLSENKHIPLEELQVLHRGK 178
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T L A+V G ++G + + YA C+GLLFQ+ DDILDVT + EELGKT G D
Sbjct: 179 TGALFNASVELGLILGNADTATRTALMKYANCLGLLFQITDDILDVTGTIEELGKTPGSD 238
Query: 300 LASGKATYPKLMGIENAKSFA---GELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K+TY L+G+E AK A G+ A+ ++Y + AA L +Y+ R N
Sbjct: 239 IRQHKSTYVSLLGLEGAKEQAASVGKQAHNALNSVSYDTSILAA----LIDYLLKRTN 292
>gi|257482376|ref|ZP_05636417.1| geranyltranstransferase [Pseudomonas syringae pv. tabaci str. ATCC
11528]
gi|422594221|ref|ZP_16668512.1| geranyltranstransferase [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|422680447|ref|ZP_16738719.1| geranyltranstransferase [Pseudomonas syringae pv. tabaci str. ATCC
11528]
gi|298160570|gb|EFI01592.1| geranyltranstransferase [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|330984529|gb|EGH82632.1| geranyltranstransferase [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|331009793|gb|EGH89849.1| geranyltranstransferase [Pseudomonas syringae pv. tabaci str. ATCC
11528]
Length = 295
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 127/294 (43%), Positives = 185/294 (62%), Gaps = 9/294 (3%)
Query: 67 YMIRKAEQVNKALDEAVVLQPPV----KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
Y + +VN AL++ + Q P ++++AMRYS++ GGKRVRPLL A+CE +GG
Sbjct: 5 YQAQSQTRVNAALEK--LFQAPSPELNRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 63 EDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFT 122
Query: 183 H-VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
+A ++ + ++ + + +A G G+V G+ +D+ S G + LEY+H HKT
Sbjct: 123 ALLAPHLTSRDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTG 182
Query: 242 KLLEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
L+EA+V GA+ G + ++ ++ YAR +GL FQV DDILDV + LGK G D+
Sbjct: 183 ALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGKRQGADI 242
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A K TYP L+G+E AK +A EL QA+ L+ F+A+ A PL LA YI R++
Sbjct: 243 ARDKPTYPALLGLEAAKRYALELRDQALTALSTFDAA-AEPLRELARYIVERRH 295
>gi|256845599|ref|ZP_05551057.1| dimethylallyltransferase [Fusobacterium sp. 3_1_36A2]
gi|256719158|gb|EEU32713.1| dimethylallyltransferase [Fusobacterium sp. 3_1_36A2]
Length = 297
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/296 (38%), Positives = 174/296 (58%), Gaps = 9/296 (3%)
Query: 64 FEEYMIRKAE----QVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
F+ Y+ K + ++ K L E L P I K M Y++L GGKR+RP L A+ EL+
Sbjct: 4 FQVYLKEKTDFFETELKKELKE---LSYPETIAKGMEYAILNGGKRLRPFLLFATLELLN 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
+ + +A ALEMIH+ SL+HDDLP LDND+ RR K +H+VFGE+ IL GD+LL+
Sbjct: 61 ENIKKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTY 120
Query: 180 ALEHVAV-NIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
A ++ N+ +S +++V I++ G+ G++ G+ +DI SE K + L+ L+YIH H
Sbjct: 121 AFYVLSQKNLEFLSSEQLVNIISKTSEYAGINGMIGGQMIDIESENKKIGLETLKYIHSH 180
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT KL++ + +I + + + YA IGL FQV DDILD+ + E+LGK G
Sbjct: 181 KTGKLIKLPIEIACIIANVEKDKRKVLEEYADLIGLAFQVKDDILDIEGTFEDLGKPVGS 240
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELA-YFEASKAAPLYFLANYIASRQ 353
D+ KATYP ++G+E +K + +A E + F K L LA++I +R
Sbjct: 241 DVDLHKATYPSILGMEESKKILNNTVEKAKEIIKNKFGKEKGKVLISLADFIKNRN 296
>gi|320354500|ref|YP_004195839.1| farnesyl-diphosphate synthase [Desulfobulbus propionicus DSM 2032]
gi|320123002|gb|ADW18548.1| farnesyl-diphosphate synthase [Desulfobulbus propionicus DSM 2032]
Length = 298
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 183/295 (62%), Gaps = 9/295 (3%)
Query: 67 YMIRKAEQVNKALDEAVVLQPPVKIHK---AMRYSLLAGGKRVRPLLCIASCELVGGDES 123
Y+ + ++V L A++L+P + +MRYSL GGKR+RP+LC+A E V E+
Sbjct: 6 YLNDQRQRVEDQL-AALMLKPAGDFSQHIESMRYSLFVGGKRIRPILCLAGAEAVDSGEA 64
Query: 124 W---AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
A+ ACALE IHT SLIHDDLP +D+D+ RR KP +H VFGE+ AILAGD LL+ A
Sbjct: 65 TRQRALSVACALECIHTYSLIHDDLPAMDDDDLRRGKPTNHTVFGEAAAILAGDGLLTFA 124
Query: 181 LEHVAVNI-AGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
+ ++ A ++ +R I + A G G+V G+ +D+ EG+ V + L IH K
Sbjct: 125 FDLLSSQASADINDAARIRIIQTIARAAGPLGMVGGQSLDMIYEGQQVGYEMLRTIHRSK 184
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T L+ A+V+ GA++ G +A + ++ Y IGL FQ+VDD+LDV ++E+LGK AG D
Sbjct: 185 TGALITASVLSGAMVAGASAEQETALKTYGDNIGLAFQIVDDLLDVEATTEQLGKPAGSD 244
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L S K TYP L G E +++ A E + +AI LA F+ +A PL LAN+I R+
Sbjct: 245 LKSDKVTYPSLFGKETSRTMAREAVQEAIAALAAFD-HQADPLRNLANFIVDRKK 298
>gi|423400972|ref|ZP_17378145.1| hypothetical protein ICW_01370 [Bacillus cereus BAG2X1-2]
gi|401653962|gb|EJS71505.1| hypothetical protein ICW_01370 [Bacillus cereus BAG2X1-2]
Length = 296
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 113/244 (46%), Positives = 164/244 (67%), Gaps = 1/244 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR+RPLL A+ + G + + + AACALEMIHT SL+HDD
Sbjct: 27 LQCPNVLREAMAYSLGAGGKRLRPLLLFATLQAFGKERNLGIGAACALEMIHTYSLVHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + + A +S ++ VR + E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+V G+ D+ +EGK +++ ELEYIH HKT KLLE AV+ G+++ + E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++ +A+ IGL FQ+ DDILDV + EE+GK G D+++ K+TY L ++ AK E
Sbjct: 207 KLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILEET 266
Query: 324 LGQA 327
+ +A
Sbjct: 267 IAKA 270
>gi|363814567|ref|NP_001242759.1| uncharacterized protein LOC100788186 [Glycine max]
gi|255635048|gb|ACU17882.1| unknown [Glycine max]
Length = 342
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 117/296 (39%), Positives = 168/296 (56%), Gaps = 15/296 (5%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLA-GGKRVRPLLCIASCELVGG 120
F + Y Q+N+ LDEA+ +Q P +I++AMRYS+LA G KR P++CI++CEL GG
Sbjct: 48 FDLKTYCANLMVQINQKLDEAIPVQFPPQIYEAMRYSVLAKGAKRAPPVMCISACELFGG 107
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
A P ACALEM+H SLIHDDLP +D+ RR +P++H ++G AILAGDAL L
Sbjct: 108 SRLAAFPTACALEMVHAASLIHDDLPCMDDSPSRRGQPSNHTIYGVDMAILAGDALFPLG 167
Query: 181 LEHVAVNIAG--VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
H+ V ++R IAE+ ++G G+ AG+F+D+ V +I
Sbjct: 168 FRHIVSQTPSDLVPESHLLRVIAEIARSVGSTGMAAGQFLDLEGGPNAVG-----FIQEK 222
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
K ++ E++ VCG + G E+ER+R Y R +G+L+ VVDDI++ E G K
Sbjct: 223 KFGEMGESSAVCGGFLAGAEDDEIERLRRYGRAVGVLYAVVDDIIEERLKVEGDGNRKNK 282
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFE--ASKAAPLYFLANYIASR 352
GK +Y ++ G+E A A EL +A EEL FE + PLY +Y R
Sbjct: 283 ----GK-SYAEVYGVEKAIEKAEELRAKAKEELDGFEKHGERVLPLYSFVDYAFDR 333
>gi|196041614|ref|ZP_03108906.1| geranyltranstransferase [Bacillus cereus NVH0597-99]
gi|229093237|ref|ZP_04224355.1| Geranyltranstransferase [Bacillus cereus Rock3-42]
gi|196027602|gb|EDX66217.1| geranyltranstransferase [Bacillus cereus NVH0597-99]
gi|228690211|gb|EEL44005.1| Geranyltranstransferase [Bacillus cereus Rock3-42]
Length = 296
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 117/271 (43%), Positives = 174/271 (64%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR+RPLL A+ + + + + AACALEMIHT SL+HDD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFDKERNLGVGAACALEMIHTYSLVHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + + A +S ++ VR + E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAEKKVRLVLEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+V G+ D+ +EGK +++ ELEYIH HKT KLLE AV+ G+++ + E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKKLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++ +A+ IGL FQ+ DDILDV + EE+GK G D+++ K+TY L ++ AK E
Sbjct: 207 KLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILDET 266
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A + + + + L + + IA R N
Sbjct: 267 IAKAKDAIGSLQL-QDEYLLSICDLIAKRNN 296
>gi|422667496|ref|ZP_16727359.1| polyprenyl synthetase [Pseudomonas syringae pv. aptata str. DSM
50252]
gi|330978746|gb|EGH77971.1| polyprenyl synthetase [Pseudomonas syringae pv. aptata str. DSM
50252]
Length = 295
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 128/292 (43%), Positives = 182/292 (62%), Gaps = 5/292 (1%)
Query: 67 YMIRKAEQVNKALDEAVVLQPPV--KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW 124
Y + +VN ALD P ++++AMRYS++ GGKRVRPLL A+CE +GG
Sbjct: 5 YQAQSQTRVNAALDGLFKAPGPELERLYQAMRYSVMNGGKRVRPLLAYAACEALGGVAED 64
Query: 125 AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH- 183
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 65 ANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTAL 124
Query: 184 VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
+A + + ++ + + +A G G+V G+ +D+ S G + LEY+H HKT L
Sbjct: 125 LAPHPTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGAL 184
Query: 244 LEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
+EA+V GA+ G + ++ ++ YAR IGL FQV DDILDV + LGK G D+A
Sbjct: 185 IEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADIAR 244
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TYP L+G+E AK +A EL QA++ L+ F+A+ A PL LA YI R++
Sbjct: 245 DKPTYPALLGLEAAKHYALELRDQALQALSPFDAA-AEPLRQLARYIVERRH 295
>gi|157692927|ref|YP_001487389.1| geranyltranstransferase [Bacillus pumilus SAFR-032]
gi|157681685|gb|ABV62829.1| geranyltranstransferase [Bacillus pumilus SAFR-032]
Length = 296
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 121/296 (40%), Positives = 184/296 (62%), Gaps = 3/296 (1%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVV-LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
T E++ + + + L V L P + +M YSL AGGKR+RP+L +A G
Sbjct: 2 TSNLNEFLTTRKQTIEDYLFTYVQELTIPKDLKSSMLYSLKAGGKRLRPVLVLALLNAYG 61
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
+E +P CA+EMIHT SLIHDDLP +D+D+ RR KP +H+V+GE+TA+LAGDALL+
Sbjct: 62 KNEEDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVYGEATAVLAGDALLTE 121
Query: 180 ALEHVAVNIAG-VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
+ + ++ VS D+ +R + E+ + G G+V G+F D+ +E K VSL ELEYIH
Sbjct: 122 SFRLITSQLSSSVSADKKLRIVDELVKSAGALGMVGGQFDDMEAEQKQVSLAELEYIHAR 181
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT KLL +V GA++ G + ++E++R ++ IG+ FQ+ DDILD+ S E++GK G
Sbjct: 182 KTGKLLTFSVAAGAMLAGASDDDIEKLREFSYHIGIAFQIRDDILDLEGSEEKIGKRVGS 241
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
D A+ K+TYP L+ + AK E + +A E ++ + + L+ L + IASR +
Sbjct: 242 DTANEKSTYPSLLTLSGAKEKLDEHITRAKEIVSNLQLEQQL-LHGLCDLIASRDH 296
>gi|385330322|ref|YP_005884273.1| geranyltranstransferase [Marinobacter adhaerens HP15]
gi|311693472|gb|ADP96345.1| geranyltranstransferase [Marinobacter adhaerens HP15]
Length = 298
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 111/266 (41%), Positives = 165/266 (62%), Gaps = 3/266 (1%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLD 149
++ +AMRYS+L GGKR+RP LC+A+ + +G A+ AC++E+IH SLIHDDLP +D
Sbjct: 35 RLQEAMRYSVLGGGKRIRPALCLAAAKAMGQTGDEALIPACSVELIHAYSLIHDDLPAMD 94
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGV 209
+DE RR +P +H F E+TAILAGDAL +LA +A G+S + + E+ A G
Sbjct: 95 DDELRRGRPTTHIAFDEATAILAGDALQALAFGWLA-EAPGLSESVRLIMVRELARASGH 153
Query: 210 EGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGG-NAIEVERVRNY 268
G+V G+ +D+ S GK ++L +LE +H HKT L+E +V GA+ + + + Y
Sbjct: 154 GGMVGGQAIDLESVGKTLALAQLETMHRHKTGALIETSVRIGALTAPSVDEQALASLTQY 213
Query: 269 ARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAI 328
A+ +GL FQV DD+LD+ + +GK G D A K TYP L+G+E A+ LL QA
Sbjct: 214 AKALGLAFQVQDDLLDIEGDTTVIGKPQGSDAARAKPTYPALLGLEGAREHLANLLEQAQ 273
Query: 329 EELAYFEASKAAPLYFLANYIASRQN 354
+ L F +A PL +A+Y+ +R +
Sbjct: 274 QSLQAF-GPEADPLRAMADYVVARTH 298
>gi|404401538|ref|ZP_10993122.1| geranyltranstransferase [Pseudomonas fuscovaginae UPB0736]
Length = 295
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 182/295 (61%), Gaps = 5/295 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPP--VKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
+ Y ++VN ALD V ++++AMRYS++ GGKRVRPLL A+CE +GG
Sbjct: 2 IKTYQAASQKRVNAALDTLFVAPSAGLARLYEAMRYSVMNGGKRVRPLLVYAACEALGGK 61
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 62 PEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 182 EHVA-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKT 240
+ ++ +S + + ++ + A G G+V G+ +D+ S G + K LE +H HKT
Sbjct: 122 SALLDPRLSDLSAEIRLSMVSTLAQAAGPAGMVGGQAIDLGSVGLKLDQKALETMHRHKT 181
Query: 241 AKLLEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
L+EA+V GA+ E++ ++ YA+ IGL FQV DDILDV + LGK G D
Sbjct: 182 GALIEASVTLGALASADAQKDELKSLQTYAQAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+A K TYP L+G+E AK++A EL QA+ L F+A+ A PL LA YI R++
Sbjct: 242 IARDKPTYPALLGLEAAKAYALELRDQALHALRPFDAA-AEPLRELARYIVERRS 295
>gi|226949181|ref|YP_002804272.1| geranyltranstransferase [Clostridium botulinum A2 str. Kyoto]
gi|226842010|gb|ACO84676.1| geranyltranstransferase [Clostridium botulinum A2 str. Kyoto]
Length = 290
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 105/242 (43%), Positives = 153/242 (63%), Gaps = 1/242 (0%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLD 149
KI++AM YSL AGGKR+RP+L + + L D AMP A A+EMIHT SLIHDDLP +D
Sbjct: 28 KIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMD 87
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGV 209
ND+ RR KP +H++FGE+ AILAGDALL+ A+ ++ + + ++ V+A + A GV
Sbjct: 88 NDDLRRGKPTNHKIFGEAIAILAGDALLNEAM-NIMFEYSLKNGEKAVKACYTIAKAAGV 146
Query: 210 EGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYA 269
+G++ G+ VDI SE K + L EL Y+H KT L++A+++ GA++G ++E + Y
Sbjct: 147 DGMIGGQVVDILSEDKSIPLDELYYMHKKKTGALIKASILAGAILGSATYTDIELLGEYG 206
Query: 270 RCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIE 329
+GL FQ+ DDILDV + LGK D + K T+ K+ GIE E+ + +
Sbjct: 207 DNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIEKCNELCTEMTNKCFD 266
Query: 330 EL 331
L
Sbjct: 267 IL 268
>gi|374703984|ref|ZP_09710854.1| farnesyl-diphosphate synthase [Pseudomonas sp. S9]
Length = 295
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/297 (43%), Positives = 182/297 (61%), Gaps = 9/297 (3%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPP--VKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
E Y + +V+ AL+ V P ++++A+RYS+ GGKRVRPLL A+CE +GG+
Sbjct: 2 IEAYQAQCQNRVDAALERLFVAPQPELQRLYQAIRYSVTNGGKRVRPLLAYAACEALGGN 61
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
A AACA+E+IH SL+HDDLP +D+D+ RR KP +H+ F E+ AILAGD L +LA
Sbjct: 62 VEHANGAACAVELIHAYSLVHDDLPAMDDDDLRRGKPTTHKAFDEAAAILAGDGLQTLAF 121
Query: 182 EHVAVNIAGVSPDRV---VRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
E + A ++P + IA + A G G+V G+ +D+ S G+ + LE +H H
Sbjct: 122 E--VLGNAELNPHSAGLRLAMIATLARASGPAGMVGGQAIDLGSVGQALDQAALENMHRH 179
Query: 239 KTAKLLEAAVVCGAVI-GGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
KT L+EA+V GA+ G + + ++ YA+ IGL FQV DDILD+ + LGKT G
Sbjct: 180 KTGALIEASVALGALASGNADPATLAALQRYAQAIGLAFQVQDDILDIESDTHTLGKTQG 239
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
KD A+ K TYP ++G++NAK +A EL QA+ L S A PL LA YI R++
Sbjct: 240 KDQANDKPTYPAILGLQNAKGYALELRDQALAALEDL-GSPAEPLRMLARYIVERRH 295
>gi|228935501|ref|ZP_04098319.1| Geranyltranstransferase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228824253|gb|EEM70067.1| Geranyltranstransferase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 296
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/271 (43%), Positives = 173/271 (63%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR+RPLL A+ + + + + AACALEMIHT SL+HDD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFDKERNLGVGAACALEMIHTYSLVHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + + A +S ++ VR + E
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAEKKVRLVLEF 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+V G+ D+ +EGK +++ ELEYIH HKT KLLE AV+ G+++ + E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++ +A+ IGL FQ+ DDILDV + EE+GK G D+++ K+TY L ++ AK E
Sbjct: 207 KLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILDET 266
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A + + + + L + + IA R N
Sbjct: 267 IAKAKDAIGSLQL-QDEYLLSICDLIAKRNN 296
>gi|424070488|ref|ZP_17807923.1| geranyltranstransferase [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
gi|408000494|gb|EKG40847.1| geranyltranstransferase [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
Length = 295
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/292 (43%), Positives = 183/292 (62%), Gaps = 5/292 (1%)
Query: 67 YMIRKAEQVNKALDEAVVLQPPV--KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW 124
Y + +VN ALD P ++++AMRYS++ GGKRVRPLL A+CE +GG
Sbjct: 5 YQAQSQTRVNAALDGLFKAPGPELERLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAED 64
Query: 125 AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH- 183
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 65 ANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTAL 124
Query: 184 VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
+A ++ + ++ + + +A G G+V G+ +D+ S G + LEY+H HKT L
Sbjct: 125 LAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGAL 184
Query: 244 LEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
+EA+V GA+ G + ++ ++ YAR IGL FQV DDILDV + LGK G D+A
Sbjct: 185 IEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADIAR 244
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TYP L+G+E AK +A EL QA++ L+ F+A+ A PL LA YI R++
Sbjct: 245 DKPTYPALLGLEAAKHYALELRDQALQALSPFDAA-AEPLRQLALYIVERRH 295
>gi|313896583|ref|ZP_07830132.1| geranyltranstransferase [Selenomonas sp. oral taxon 137 str. F0430]
gi|312974768|gb|EFR40234.1| geranyltranstransferase [Selenomonas sp. oral taxon 137 str. F0430]
Length = 295
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/276 (41%), Positives = 175/276 (63%), Gaps = 4/276 (1%)
Query: 79 LDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTM 138
LD +L K+ +M YSL+AGGKR+RP+L +A+ + VG D + + AACALEMIHT
Sbjct: 24 LDRTDILDD--KLRASMAYSLMAGGKRLRPILLMAAADAVGADGTKFITAACALEMIHTY 81
Query: 139 SLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVR 198
SLIHDDLP +DND+ RR K +H+ + E TAILAGDALL+LA V + V +R++R
Sbjct: 82 SLIHDDLPAMDNDDYRRGKLTNHKAYDEGTAILAGDALLTLAFT-VILRQQDVPAERLLR 140
Query: 199 AIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGN 258
+ E+ + G EG+V G+ +D+ +E + +S++EL+ +H+ KT L AA+ GA++ G +
Sbjct: 141 IVDEISRSAGAEGMVGGQMLDLEAENRRISMEELQRVHMGKTGALFRAALRSGAILAGAS 200
Query: 259 AIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKS 318
++ + YA GL FQ+ DDILDV ++E++GK G D + K+TY L ++ A+S
Sbjct: 201 EQQLAALTTYADHFGLAFQITDDILDVVGTAEDIGKPVGSDEKNHKSTYVTLTSLDEAQS 260
Query: 319 FAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A + + A++ L F +AA L L Y+ R+
Sbjct: 261 LARQTVESAVDALHIF-GDEAAFLRELVLYLVRRKQ 295
>gi|251796322|ref|YP_003011053.1| polyprenyl synthetase [Paenibacillus sp. JDR-2]
gi|247543948|gb|ACT00967.1| Polyprenyl synthetase [Paenibacillus sp. JDR-2]
Length = 302
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 124/299 (41%), Positives = 182/299 (60%), Gaps = 13/299 (4%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQ---PPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
+ Y+ A V K+L EA+ + PP ++ ++M YSL AGGKR+RP L +A+ E V G
Sbjct: 5 IKTYLHECAALVEKSLPEALPAEWNIPP-QLRESMLYSLQAGGKRLRPALVLAAAEAVHG 63
Query: 121 DES---WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALL 177
+ A+P ACA+E IHT SL+HDDLP +DND+ RR K +H+VFGE+ AILAGDALL
Sbjct: 64 QAAAARHALPVACAIEYIHTYSLVHDDLPAMDNDDYRRGKLTNHKVFGEAMAILAGDALL 123
Query: 178 SLALEHV--AVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYI 235
+ A + + G+S + + + ++ G G+V G+ D+ E S++ELEYI
Sbjct: 124 THAFHLIPKVARLGGISAEVALDIVEDLAMLAGARGMVGGQAADMQGEQGITSIEELEYI 183
Query: 236 HVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKT 295
H+HKT+ L+ +V G IGG +A ++E +R+Y R IGL FQ+ DDILD+ ++LGK
Sbjct: 184 HLHKTSDLIVFSVTAGGRIGGASAEQLEALRHYGRNIGLAFQIQDDILDLIGDEKKLGKK 243
Query: 296 AGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAP--LYFLANYIASR 352
D+ K TYP L+GI+ +K+ L +A + A EA AP L +A+Y+ R
Sbjct: 244 TNSDVEQQKVTYPYLIGIDESKAQVKRLTREA--KAAILEAQLDAPDKLLLIADYLVQR 300
>gi|228992926|ref|ZP_04152850.1| Geranyltranstransferase [Bacillus pseudomycoides DSM 12442]
gi|228766783|gb|EEM15422.1| Geranyltranstransferase [Bacillus pseudomycoides DSM 12442]
Length = 297
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/291 (43%), Positives = 179/291 (61%), Gaps = 12/291 (4%)
Query: 65 EEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW 124
EE ++R A Q LQ P + +AM YSL AGGKR+RPLL A+ + +
Sbjct: 18 EEQLVRYANQ----------LQCPNVLREAMTYSLEAGGKRLRPLLLFATLQAFEKEREL 67
Query: 125 AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV 184
+ AACALEMIHT SLIHDDLP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + V
Sbjct: 68 GIGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTHAFQVV 127
Query: 185 -AVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
A + +S + +R E+ A G EG+VAG+ D+ +EGK + L ELEYIH HKT +L
Sbjct: 128 TAYHHQDISTETKLRLALELAKAAGPEGMVAGQVADMEAEGKRLELSELEYIHKHKTGRL 187
Query: 244 LEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASG 303
LE AV+ GAV+ G + +++ +A+ IGL FQ+ DDILDV + EE+GK G D ++
Sbjct: 188 LEYAVLAGAVLAGATPEQEKKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNE 247
Query: 304 KATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K+TY L I+ AK E + +A + +A + L + + IA R N
Sbjct: 248 KSTYTTLFTIDEAKCILEETIVKAKDAIASLQLQDEY-LLSICDLIAKRNN 297
>gi|440720697|ref|ZP_20901109.1| polyprenyl synthetase [Pseudomonas syringae BRIP34876]
gi|440727848|ref|ZP_20908074.1| polyprenyl synthetase [Pseudomonas syringae BRIP34881]
gi|443641335|ref|ZP_21125185.1| Geranylgeranyl pyrophosphate synthase [Pseudomonas syringae pv.
syringae B64]
gi|440363253|gb|ELQ00423.1| polyprenyl synthetase [Pseudomonas syringae BRIP34881]
gi|440365067|gb|ELQ02181.1| polyprenyl synthetase [Pseudomonas syringae BRIP34876]
gi|443281352|gb|ELS40357.1| Geranylgeranyl pyrophosphate synthase [Pseudomonas syringae pv.
syringae B64]
Length = 295
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/292 (43%), Positives = 182/292 (62%), Gaps = 5/292 (1%)
Query: 67 YMIRKAEQVNKALDEAVVLQPPV--KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW 124
Y + +VN ALD P ++++AMRYS++ GGKRVRPLL A+CE +GG
Sbjct: 5 YQAQSQTRVNAALDGLFKAPGPELERLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAED 64
Query: 125 AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH- 183
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 65 ANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTAL 124
Query: 184 VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
+A ++ + ++ + + A G G+V G+ +D+ S G + LEY+H HKT L
Sbjct: 125 LAPHLTSRDAETRLQMVTTLAIAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGAL 184
Query: 244 LEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
+EA+V GA+ G + ++ ++ YAR IGL FQV DDILDV + LGK G D+A
Sbjct: 185 IEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADIAR 244
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TYP L+G+E AK +A EL QA++ L+ F+A+ A PL LA YI R++
Sbjct: 245 DKPTYPALLGLEAAKHYALELRDQALQALSPFDAA-AEPLRQLARYIVERRH 295
>gi|429246185|ref|ZP_19209527.1| geranyltranstransferase [Clostridium botulinum CFSAN001628]
gi|428756789|gb|EKX79319.1| geranyltranstransferase [Clostridium botulinum CFSAN001628]
Length = 290
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/242 (42%), Positives = 154/242 (63%), Gaps = 1/242 (0%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLD 149
KI++AM YSL AGGKR+RP+L + + L D AMP A A+EMIHT SLIHDDLP +D
Sbjct: 28 KIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMD 87
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGV 209
ND+ RR KP +H++FGE+ AILAGDALL+ A+ ++ + + ++ ++A + A GV
Sbjct: 88 NDDLRRGKPTNHKIFGEAIAILAGDALLNEAM-NIMFEYSLKNGEKALKACYTIAKAAGV 146
Query: 210 EGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYA 269
+G++ G+ VDI SE K ++L EL Y+H KT L++A+++ GA++G ++E + Y
Sbjct: 147 DGMIGGQVVDILSEDKSITLDELYYMHKKKTGALIKASILAGAILGSATYTDIELLGEYG 206
Query: 270 RCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIE 329
+GL FQ+ DDILDV + LGK D + K T+ K+ GIE E+ + +
Sbjct: 207 DNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIEKCNELCTEMTNKCFD 266
Query: 330 EL 331
L
Sbjct: 267 IL 268
>gi|168180471|ref|ZP_02615135.1| geranyltranstransferase [Clostridium botulinum NCTC 2916]
gi|182668864|gb|EDT80842.1| geranyltranstransferase [Clostridium botulinum NCTC 2916]
Length = 290
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 105/242 (43%), Positives = 153/242 (63%), Gaps = 1/242 (0%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLD 149
KI++AM YSL AGGKR+RP+L + + L D AMP A A+EMIHT SLIHDDLP +D
Sbjct: 28 KIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMD 87
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGV 209
ND+ RR KP +H++FGE+ AILAGDALL+ A+ ++ + + ++ V+A + A GV
Sbjct: 88 NDDLRRGKPTNHKIFGEAIAILAGDALLNEAM-NIMFEYSLKNGEKAVKACYTIAKAAGV 146
Query: 210 EGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYA 269
+G++ G+ VDI SE K + L EL Y+H KT L++A+++ GA++G ++E + Y
Sbjct: 147 DGMIGGQVVDILSEDKSIPLDELYYMHKKKTGALIKASILAGAILGSATYTDIELLGEYG 206
Query: 270 RCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIE 329
+GL FQ+ DDILDV + LGK D + K T+ K+ GIE E+ + +
Sbjct: 207 DNLGLAFQIKDDILDVEGDTTTLGKETKSDEDNHKTTFVKVYGIEKCNELCTEMTNKCFD 266
Query: 330 EL 331
L
Sbjct: 267 IL 268
>gi|94500549|ref|ZP_01307080.1| Polyprenyl synthetase [Bermanella marisrubri]
gi|94427339|gb|EAT12318.1| Polyprenyl synthetase [Bermanella marisrubri]
Length = 294
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/294 (39%), Positives = 169/294 (57%), Gaps = 5/294 (1%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPV---KIHKAMRYSLLAGGKRVRPLLCIASCELV 118
F+E+ ++ L VL P V ++ AM YSLL GGKRVRPL+ A+ +
Sbjct: 1 MTFQEFQTWSQDRFQSILKADYVL-PNVDAQRLKDAMTYSLLNGGKRVRPLMVYATTRSL 59
Query: 119 GGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLS 178
GD A A A+EMIH SL+HDDLP +D+DE RR +P H F E+TAILAGDAL +
Sbjct: 60 SGDLQAADQCALAVEMIHAYSLVHDDLPAMDDDELRRGQPTCHIAFDEATAILAGDALQT 119
Query: 179 LALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
A + + I G++P + +R + + A G+ G+ G+ +D+ + K V ++ L+ +H+H
Sbjct: 120 QAFQVLVQPIDGMAPQQQLRMVQTLAHASGLAGMAGGQSLDLEAVDKQVDIEYLQNMHLH 179
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT L+EA+V G + + ++ + YA+ IGL FQV DDILDV + LGK G
Sbjct: 180 KTGALIEASVKLGGLCANASEQQLSYLSVYAQAIGLAFQVQDDILDVISDTRTLGKPQGS 239
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
D + K TY L+G++ AK A +L QA + L +A +PL +A YI R
Sbjct: 240 DESRNKPTYVSLLGLDGAKRKAQDLHQQARDALRKLDAD-TSPLEDIARYIIER 292
>gi|187250684|ref|YP_001875166.1| geranylgeranyl pyrophosphate synthase [Elusimicrobium minutum
Pei191]
gi|186970844|gb|ACC97829.1| Geranylgeranyl pyrophosphate synthase [Elusimicrobium minutum
Pei191]
Length = 334
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 130/330 (39%), Positives = 188/330 (56%), Gaps = 42/330 (12%)
Query: 64 FEEYMIRKAEQVNKALDEAV--VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
FE+Y+ KA V K L + + + P I +M YSL AGGKRVRP+L +A+ E G
Sbjct: 4 FEKYLKTKAAFVEKGLSKYILKIANSPEVIKDSMAYSLEAGGKRVRPVLVMAAAEAFGKK 63
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
+ MPAACA+EM+HT SLIHDDLP +DND RR KP +H+V+GE A+LAGDALL+ A
Sbjct: 64 AADVMPAACAVEMVHTYSLIHDDLPSMDNDSLRRGKPTNHKVYGEDLALLAGDALLTYAF 123
Query: 182 EHVAVN--IAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG--------------- 224
E A N + + ++A+ + +G EG+V G+ DI +EG
Sbjct: 124 EVFAQNGDVKSIGHKNTLKALQLFANGVGSEGMVGGQVTDIYAEGLIEGKFKRITAVKKE 183
Query: 225 ------------------KDVSLKE-LEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERV 265
K+VS + L YIH +KT L+ +++ GAV+ G + + +
Sbjct: 184 SKALSKKSVKYFLMPAKLKEVSAETVLSYIHANKTGALIRSSIEAGAVLAGASEADRANM 243
Query: 266 RNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLG 325
R Y +GL FQ+VDDILDVT S ++LGK+ G D + K T+ L G+E ++ +A +LG
Sbjct: 244 RKYGNAMGLAFQIVDDILDVTVSEKKLGKS-GSDKENAKLTFVSLYGLEVSRKYAKAVLG 302
Query: 326 QAIEELAYFEA---SKAAPLYFLANYIASR 352
+A+ L +A KAAPLY +A++ +R
Sbjct: 303 EAVNALNKVKAINKKKAAPLYEMADFFLTR 332
>gi|359474993|ref|XP_003631564.1| PREDICTED: geranylgeranyl pyrophosphate synthase-related protein,
chloroplastic-like isoform 2 [Vitis vinifera]
Length = 341
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/296 (38%), Positives = 171/296 (57%), Gaps = 15/296 (5%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLA-GGKRVRPLLCIASCELVGG 120
F Y ++N L+EA+ ++ P +I++AMRYS+LA GGKR P++C+A CEL GG
Sbjct: 48 FDLRSYWTTLISEINTKLEEAIPVKYPQQIYEAMRYSVLAKGGKRAPPVMCVAVCELFGG 107
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
D A P ACALEM+H SLIHDDLP +D+D RR +P++H V+G AILAGDAL L
Sbjct: 108 DRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLG 167
Query: 181 LEHVAVNIAG--VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
H+ + V +++R IAE+ ++G G+ AG+F+D+ EG S ++++
Sbjct: 168 FRHIVSHTPSHLVPEGQLIRVIAEIARSVGSTGMAAGQFLDL--EGAPNS---VDFVQRK 222
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
K ++ E + VCG +GG ++ R+R Y R +G+L+QVVDD+L SEE +
Sbjct: 223 KFGEMAECSAVCGGFLGGAADDDILRLRRYGRAVGMLYQVVDDVLKAKTKSEEDEEK--- 279
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFE--ASKAAPLYFLANYIASR 352
+Y + G+E A A EL +A EL+ F+ PLY ++ A R
Sbjct: 280 --KKKGKSYVDVYGMEKAMEVAEELRAKAKRELSGFDKYGDSVVPLYSFVDFAAER 333
>gi|289623775|ref|ZP_06456729.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str.
NCPPB 3681]
gi|289646544|ref|ZP_06477887.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str.
2250]
gi|422581075|ref|ZP_16656219.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|330865926|gb|EGH00635.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str.
0893_23]
Length = 295
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 127/294 (43%), Positives = 185/294 (62%), Gaps = 9/294 (3%)
Query: 67 YMIRKAEQVNKALDEAVVLQPPV----KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
Y + +VN AL++ + Q P ++++AMRYS++ GGKRVRPLL A+CE +GG
Sbjct: 5 YQAQSQTRVNAALEK--LFQAPSPELNRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 63 EDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFT 122
Query: 183 H-VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
+A ++ + ++ + + +A G G+V G+ +D+ S G + LEY+H HKT
Sbjct: 123 ALLAPHLTSRDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTG 182
Query: 242 KLLEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
L+EA+V GA+ G + ++ ++ YAR +GL FQV DDILDV + LGK G D+
Sbjct: 183 ALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGKRQGADI 242
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A K TYP L+G+E AK +A EL QA+ L+ F+A+ A PL LA YI R++
Sbjct: 243 ARDKPTYPALLGLEAAKRYALELRDQALTALSPFDAA-AEPLRELARYIVERRH 295
>gi|205374084|ref|ZP_03226884.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
coahuilensis m4-4]
Length = 294
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/258 (44%), Positives = 167/258 (64%), Gaps = 2/258 (0%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAV-VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
T +M ++K L E + L P + ++M YS+ AGGKR+RP+L +A+ E G
Sbjct: 2 TTNLRSFMTEYKAIIDKELVEQIDYLSIPTSLKESMIYSVSAGGKRIRPVLLLATIEAFG 61
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
+ + AA ALEM+HT SLIHDDLP +D+D+ RR KP +H+VFGE+TAILAGDALL+
Sbjct: 62 KSPALGIKAAVALEMVHTYSLIHDDLPSMDDDDLRRGKPTNHKVFGEATAILAGDALLTY 121
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
+ E +A ++ + P + + A G EG+V G+ D+ E K ++L+ELEYIH +K
Sbjct: 122 SFEVIA-SMKDILPQTKIELVRLFAKAAGPEGMVGGQVADMEGERKTLTLEELEYIHRNK 180
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T KLL+ AVV GA+IGG + EV + YA IGL FQ+ DDILD+ + +++GK G D
Sbjct: 181 TGKLLQYAVVAGAIIGGASKEEVRLYKEYAEHIGLAFQIKDDILDIEGTEDKIGKRVGSD 240
Query: 300 LASGKATYPKLMGIENAK 317
+ + K+TYP L+ +E AK
Sbjct: 241 VNNDKSTYPSLLTLEGAK 258
>gi|147776976|emb|CAN70079.1| hypothetical protein VITISV_001037 [Vitis vinifera]
Length = 341
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/296 (38%), Positives = 171/296 (57%), Gaps = 15/296 (5%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLA-GGKRVRPLLCIASCELVGG 120
F Y ++N L+EA+ ++ P +I++AMRYS+LA GGKR P++C+A CEL GG
Sbjct: 48 FDLRSYWTTLISEINTKLEEAIPVKYPQQIYEAMRYSVLAKGGKRAPPVMCVAVCELFGG 107
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
D A P ACALEM+H SLIHDDLP +D+D RR +P++H V+G AILAGDAL L
Sbjct: 108 DRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLG 167
Query: 181 LEHVAVNIAG--VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
H+ + V +++R IAE+ ++G G+ AG+F+D+ EG S ++++
Sbjct: 168 FRHIVSHTPSHLVPEGQLIRVIAEIARSVGSTGMAAGQFLDL--EGAPNS---VDFVQRK 222
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
K ++ E + VCG +GG ++ R+R Y R +G+L+QVVDD+L SEE +
Sbjct: 223 KFGEMAECSAVCGGFLGGAADDDILRLRRYGRAVGMLYQVVDDMLKAKTKSEEDEEK--- 279
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFE--ASKAAPLYFLANYIASR 352
+Y + G+E A A EL +A EL+ F+ PLY ++ A R
Sbjct: 280 --KKKGKSYVDVYGMEKAMEVAEELRAKAKRELSGFDKYGDSVVPLYSFVDFAAER 333
>gi|387813233|ref|YP_005428715.1| geranyltranstransferase [Marinobacter hydrocarbonoclasticus ATCC
49840]
gi|381338245|emb|CCG94292.1| geranyltranstransferase [Marinobacter hydrocarbonoclasticus ATCC
49840]
Length = 298
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 184/292 (63%), Gaps = 4/292 (1%)
Query: 65 EEYMIRKAEQVNKALDEAVVLQPPV-KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
E Y+ + +QV++ LD + ++ + MRYS+L GGKRVRP LC+A+ +G DES
Sbjct: 9 EAYLDQCRQQVDRELDRCLARHATSERLQETMRYSVLGGGKRVRPALCMAAARAMGSDES 68
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
A+ ACALE+IH SL+HDDLP +D+D+ RR +P +H F E++AILAGDAL +LA
Sbjct: 69 TALAPACALELIHAYSLVHDDLPAMDDDDLRRGRPTAHIAFDEASAILAGDALQTLAFAL 128
Query: 184 VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
++ + +S + V I+E+ A G +G+V G+ +D+ S G+ +S+ +LE +H HKT L
Sbjct: 129 LS-DAPALSDRQRVTMISELARASGHQGMVGGQAIDLESVGRQLSVAQLEAMHRHKTGAL 187
Query: 244 LEAAVVCGAVIGGG-NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
+EA+V GA+ ++ + +YA +GL FQV DD+LD+ +E +GK G D A
Sbjct: 188 IEASVRLGALTSETVTECQLSNLTDYASALGLAFQVQDDLLDIEGDTEVIGKRQGSDAAR 247
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TYP L+GIE A+ LL +A+ L F+ S+A L +A+Y+ +R +
Sbjct: 248 AKPTYPALLGIEGARQHLARLLDEALSALESFD-SEADTLRAMADYVVARSH 298
>gi|303232200|ref|ZP_07318903.1| putative geranyltranstransferase [Veillonella atypica
ACS-049-V-Sch6]
gi|401680086|ref|ZP_10812010.1| polyprenyl synthetase [Veillonella sp. ACP1]
gi|429759440|ref|ZP_19291939.1| putative geranyltranstransferase [Veillonella atypica KON]
gi|302513306|gb|EFL55345.1| putative geranyltranstransferase [Veillonella atypica
ACS-049-V-Sch6]
gi|400219213|gb|EJO50084.1| polyprenyl synthetase [Veillonella sp. ACP1]
gi|429179716|gb|EKY20955.1| putative geranyltranstransferase [Veillonella atypica KON]
Length = 292
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/277 (40%), Positives = 166/277 (59%), Gaps = 6/277 (2%)
Query: 82 AVVLQPPV----KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHT 137
+ VL P+ +++++M YSLL GGKR+RP+L A + + D S CALE IHT
Sbjct: 18 SAVLNSPIPEYKRLYESMNYSLLQGGKRIRPILTKAVLDAMKVDASLYKEFLCALECIHT 77
Query: 138 MSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVV 197
SLIHDDLP +DND+ RR +H+V+G+ AILAGD LL+ A + + N S ++ +
Sbjct: 78 YSLIHDDLPAMDNDDYRRGNLTNHKVYGDGMAILAGDGLLTYAFQLCSENTTA-SAEQKI 136
Query: 198 RAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGG 257
+AI + +A G EG+V G+ D+ SEGK + L+EL+ +H KT L AA+ G ++
Sbjct: 137 KAIQCLATAAGPEGMVGGQAFDLLSEGKHIPLEELKVLHSGKTGALFNAAIELGLILSNA 196
Query: 258 NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAK 317
+ + YA C+GLLFQ+ DDILDVT + EELGKT G D+ K+TY L+G++ A+
Sbjct: 197 DQAKYAAYMTYANCLGLLFQITDDILDVTGTIEELGKTPGSDIRQDKSTYVSLLGLDEAR 256
Query: 318 SFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ A + +A LA E L + +Y+ R N
Sbjct: 257 NEAHVVAQKAHAALATIE-DDTHILSAIIDYLLDRTN 292
>gi|71737604|ref|YP_272900.1| geranyltranstransferase [Pseudomonas syringae pv. phaseolicola
1448A]
gi|71558157|gb|AAZ37368.1| geranyltranstransferase [Pseudomonas syringae pv. phaseolicola
1448A]
Length = 295
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 126/294 (42%), Positives = 185/294 (62%), Gaps = 9/294 (3%)
Query: 67 YMIRKAEQVNKALDEAVVLQPPV----KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
Y + +VN AL++ + Q P ++++AMRYS++ GGKRVRPLL A+CE +GG
Sbjct: 5 YQAQSQTRVNAALEK--LFQAPSPELNRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
A A+CA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 63 EDANGASCAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFT 122
Query: 183 H-VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
+A ++ + ++ + + +A G G+V G+ +D+ S G + LEY+H HKT
Sbjct: 123 ALLAPHLTSRDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTG 182
Query: 242 KLLEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
L+EA+V GA+ G + ++ ++ YAR +GL FQV DDILDV + LGK G D+
Sbjct: 183 ALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGKRQGADI 242
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A K TYP L+G+E AK +A EL QA+ L+ F+A+ A PL LA YI R++
Sbjct: 243 ARDKPTYPALLGLEAAKRYALELRDQALTALSTFDAA-AEPLRELARYIVERRH 295
>gi|187779512|ref|ZP_02995985.1| hypothetical protein CLOSPO_03108 [Clostridium sporogenes ATCC
15579]
gi|187773137|gb|EDU36939.1| polyprenyl synthetase [Clostridium sporogenes ATCC 15579]
Length = 290
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/242 (42%), Positives = 154/242 (63%), Gaps = 1/242 (0%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLD 149
KI++AM YSL AGGKR+RP+L + + L D AMP A A+EMIHT SLIHDDLP +D
Sbjct: 28 KIYEAMAYSLEAGGKRIRPVLLLNTYALYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMD 87
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGV 209
ND+ RR KP +H++FGE+ AILAGDALL+ A+ ++ + + + ++A + A GV
Sbjct: 88 NDDLRRGKPTNHKIFGEAIAILAGDALLNEAM-NIMFEYSLKNGENALKACYTIAKAAGV 146
Query: 210 EGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYA 269
+G++ G+ VDI SE K +SL EL Y+H KT L++A+++ GA++G + ++E + Y
Sbjct: 147 DGMIGGQVVDILSEDKSISLDELYYMHKKKTGALIKASILAGAILGSATSTDIELLGEYG 206
Query: 270 RCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIE 329
+GL FQ+ DDILDV + LGK D + K T+ K+ GI+ E+ + +
Sbjct: 207 DNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIDKCNELCTEMTNKCFD 266
Query: 330 EL 331
L
Sbjct: 267 IL 268
>gi|317128429|ref|YP_004094711.1| polyprenyl synthetase [Bacillus cellulosilyticus DSM 2522]
gi|315473377|gb|ADU29980.1| Polyprenyl synthetase [Bacillus cellulosilyticus DSM 2522]
Length = 295
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/269 (42%), Positives = 167/269 (62%), Gaps = 4/269 (1%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
L PV++ AM YSL AGGKR+RP+L +A+ S ACA+EMIHT SLIHDD
Sbjct: 28 LNIPVQLRDAMIYSLKAGGKRIRPMLLLATLRGYNKPLSHGYDVACAIEMIHTYSLIHDD 87
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRV-VRAIAEM 203
LP +DND+ RR KP +H+VFGE+ AILAGD LL+ + + ++ ++ + PD V + I +M
Sbjct: 88 LPAMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYSFQLISSSM--LLPDNVKLLLIQKM 145
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+V G+ +D+ EG +S+ +L+ IH HKT LL +V GA++ G + E
Sbjct: 146 SQAAGPEGMVGGQVLDMQGEGITLSVDQLQKIHHHKTGDLLAVSVESGAILAGVSENERI 205
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
+ ++A+ +G+ FQ+ DDILDV +GK G D + K TYPKL+G++ AK
Sbjct: 206 SLTSFAKHLGIAFQIKDDILDVEGDESSIGKPIGSDEENDKNTYPKLLGLDGAKQKLAFH 265
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASR 352
+ +A + L Y + + L +A+YIA R
Sbjct: 266 ISEAKKYL-YETSIEHTLLEEMADYIAMR 293
>gi|289765715|ref|ZP_06525093.1| dimethylallyltransferase [Fusobacterium sp. D11]
gi|289717270|gb|EFD81282.1| dimethylallyltransferase [Fusobacterium sp. D11]
Length = 297
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/296 (39%), Positives = 171/296 (57%), Gaps = 9/296 (3%)
Query: 64 FEEYMIRKAE----QVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
F+ Y+ K + ++ K L E L P I K M Y++L GGKR+RP L EL+
Sbjct: 4 FQVYLKEKTDFFETELKKELKE---LSYPETIAKGMEYAILNGGKRLRPFLLFVILELLN 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
+ + + +A ALEMIH+ SL+HDDLP LDND+ RR K +H+VFGE+ IL GD+LL+
Sbjct: 61 ENINKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTY 120
Query: 180 ALEHVAV-NIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
A ++ N+ +S ++V I++ G+ G++ G+ +DI SE K + L+ L+YIH H
Sbjct: 121 AFYVLSQKNLELLSSKQIVNIISKTSEYAGINGMIGGQMIDIESENKKIDLETLKYIHSH 180
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT KL++ + +I + E + YA IGL FQV DDILDV + E+LGK G
Sbjct: 181 KTGKLIKLPIEIACIIANVEKDKKEVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGS 240
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELA-YFEASKAAPLYFLANYIASRQ 353
D+ KATYP ++G+E +K + +A E + F K L LA++I R
Sbjct: 241 DVDLHKATYPSILGMEESKKILNNTVKKAKEIIKDKFGDEKGKILISLADFIKDRN 296
>gi|170761674|ref|YP_001787211.1| geranyltranstransferase [Clostridium botulinum A3 str. Loch Maree]
gi|169408663|gb|ACA57074.1| putative geranyltranstransferase [Clostridium botulinum A3 str.
Loch Maree]
Length = 290
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 105/242 (43%), Positives = 153/242 (63%), Gaps = 1/242 (0%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLD 149
KI++AM YSL AGGKR+RP+L + + L D AMP A A+EMIHT SLIHDDLP +D
Sbjct: 28 KIYEAMIYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMD 87
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGV 209
ND+ RR KP +H++FGE+ AILAGDALL+ A+ ++ + + + ++A + A GV
Sbjct: 88 NDDLRRGKPTNHKIFGEAIAILAGDALLNEAM-NIMFEYSLKNGEEALKACYTITKAAGV 146
Query: 210 EGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYA 269
+G++ G+ VDI SE K +SL EL Y+H KT L++A+++ GA++G ++E + Y
Sbjct: 147 DGMIGGQVVDILSEDKSISLDELYYMHKKKTGALIKASILAGAILGSATYTDIELLGEYG 206
Query: 270 RCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIE 329
+GL FQ+ DDILDV + LGK D + K T+ K+ GIE E+ + +
Sbjct: 207 DNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIEKCNELCTEMTNKCFD 266
Query: 330 EL 331
L
Sbjct: 267 IL 268
>gi|229086753|ref|ZP_04218919.1| Geranyltranstransferase [Bacillus cereus Rock3-44]
gi|228696574|gb|EEL49393.1| Geranyltranstransferase [Bacillus cereus Rock3-44]
Length = 297
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 127/291 (43%), Positives = 178/291 (61%), Gaps = 12/291 (4%)
Query: 65 EEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW 124
EE ++R A Q LQ P + +AM YSL AGGKR+RPLL A+ + +
Sbjct: 18 EEQLVRYANQ----------LQCPNVLREAMIYSLEAGGKRLRPLLLFATLQAFEKEREL 67
Query: 125 AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV 184
+ AACALEMIHT SLIHDDLP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + V
Sbjct: 68 GIGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQAV 127
Query: 185 -AVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
A + V + +R E+ A G EG+VAG+ D+ +EGK + + LEYIH HKT +L
Sbjct: 128 TAYDHQDVQAETKLRLALELAKAAGPEGMVAGQVADMEAEGKRLEREGLEYIHKHKTGRL 187
Query: 244 LEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASG 303
LE AV+ GA++ G + E++ +A+ IGL FQ+ DDILDV + EE+GK G D ++
Sbjct: 188 LEYAVLAGAILAGATPEQEEKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNE 247
Query: 304 KATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K+TY L I+ AK E +G+A + +A + L + + IA R N
Sbjct: 248 KSTYTTLFTIDEAKCILEETIGKAKDAIASLQLQD-EHLLSICDLIAKRNN 297
>gi|70732810|ref|YP_262577.1| geranyltranstransferase [Pseudomonas protegens Pf-5]
gi|68347109|gb|AAY94715.1| geranyltranstransferase [Pseudomonas protegens Pf-5]
Length = 295
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/267 (45%), Positives = 172/267 (64%), Gaps = 3/267 (1%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLD 149
++++AMRYS++ GGKRVRPLL A+CE +GG A AACA+E+IH SL+HDDLP +D
Sbjct: 30 RLYEAMRYSVMNGGKRVRPLLAYAACEALGGKPEQANGAACAVELIHAYSLVHDDLPAMD 89
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVA-VNIAGVSPDRVVRAIAEMCSAMG 208
+D+ RR +P +H+ F E+ AILAGD L SLA + ++ S + +R + + A G
Sbjct: 90 DDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLDPALSDASAEIRLRMVTTLAQAAG 149
Query: 209 VEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGG-GNAIEVERVRN 267
G+V G+ +D+ S G + + LEY+H HKT L+EA+V+ GA+ G E++ ++
Sbjct: 150 PAGMVGGQAIDLGSVGLKLDQQALEYMHRHKTGALIEASVILGALASGRAEKGELKALQT 209
Query: 268 YARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQA 327
YA+ IGL FQV DDILDV + LGK G D+A K TYP L+G+ AK +A EL QA
Sbjct: 210 YAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLAAAKEYALELRDQA 269
Query: 328 IEELAYFEASKAAPLYFLANYIASRQN 354
+ L F+A+ A PL LA YI R++
Sbjct: 270 LHALRPFDAA-AEPLRELARYIVERRS 295
>gi|383784947|ref|YP_005469517.1| geranyltranstransferase [Leptospirillum ferrooxidans C2-3]
gi|383083860|dbj|BAM07387.1| putative geranyltranstransferase [Leptospirillum ferrooxidans C2-3]
Length = 307
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/267 (43%), Positives = 170/267 (63%), Gaps = 3/267 (1%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLD 149
++ ++MRYSLLAGGKR+RP+L +A+ VG D +P LE+IHT SLIHDDLP +D
Sbjct: 42 RLSESMRYSLLAGGKRIRPILSMAALSSVGHDPEPYIPLLLPLELIHTYSLIHDDLPAMD 101
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVAV-NIAGVSPDRVVRAIA-EMCSAM 207
ND+ RR KP +H VFG++TAILAGDALL+ A ++ +S ++V A+ E+
Sbjct: 102 NDDLRRGKPTNHVVFGDATAILAGDALLTYAFTILSDPRYDELSSEKVRLAVVRELSHGS 161
Query: 208 GVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRN 267
G+ G+V G+ +D+ SEG+ +SL++LE++H HKT L+ ++V GA++G A E +
Sbjct: 162 GLAGMVGGQMLDMESEGRRISLEDLEFLHRHKTGALILSSVRIGALLGEAGASEFNSLDQ 221
Query: 268 YARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQA 327
Y +G+ FQ+ DD+LDV + LGK A KD K TYP L+GI+ AK A E L A
Sbjct: 222 YGESVGVAFQIADDLLDVEGDAATLGKAAQKDNNHLKNTYPALLGIDGAKKMAKEKLEAA 281
Query: 328 IEELAYFEASKAAPLYFLANYIASRQN 354
++ ++ KA L +A YI R+N
Sbjct: 282 LDAVSGL-GEKADHLRGIARYIIERRN 307
>gi|345875754|ref|ZP_08827543.1| geranyltranstransferase [Neisseria weaveri LMG 5135]
gi|417957382|ref|ZP_12600305.1| geranyltranstransferase [Neisseria weaveri ATCC 51223]
gi|343968389|gb|EGV36618.1| geranyltranstransferase [Neisseria weaveri ATCC 51223]
gi|343968452|gb|EGV36680.1| geranyltranstransferase [Neisseria weaveri LMG 5135]
Length = 298
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/268 (42%), Positives = 163/268 (60%), Gaps = 3/268 (1%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPF 147
P K+H+AMRY L GGKR+RPLL +A+ EL D + A A+EMIH SL+HDD+P
Sbjct: 33 PSKLHEAMRYVTLGGGKRLRPLLVLAASELGEADATAVEQAMAAIEMIHVYSLVHDDMPA 92
Query: 148 LDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAM 207
+DND RR KP H + E+TA+L GDAL + A + V G+ R + ++ + A
Sbjct: 93 MDNDSLRRGKPTCHVQYDEATALLVGDALQTQAFD-VLSRPCGLPAARQLNMLSVLAKAS 151
Query: 208 GVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAV-IGGGNAIEVERVR 266
G G+ G+ +D+A+ GK ++ ELE +H KT L+ AAV GA+ G + + +
Sbjct: 152 GSFGMAGGQAIDLANVGKPMTQTELEQMHGLKTGALIRAAVALGALSCPGLDDTALAALD 211
Query: 267 NYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQ 326
NYA +GL FQV+DD+LD + LGKTAGKD + K TY KLMG+E A+S+A +L+ +
Sbjct: 212 NYATNLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKLMGLEQARSYAEQLIAE 271
Query: 327 AIEELAYFEASKAAPLYFLANYIASRQN 354
A L F KA L LA ++ +R+N
Sbjct: 272 ATIYLESF-GEKAVHLRLLAEFVTARKN 298
>gi|416019022|ref|ZP_11565915.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
B076]
gi|416024129|ref|ZP_11568308.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
race 4]
gi|320321850|gb|EFW77946.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
B076]
gi|320331043|gb|EFW87017.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 295
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 127/294 (43%), Positives = 185/294 (62%), Gaps = 9/294 (3%)
Query: 67 YMIRKAEQVNKALDEAVVLQPPV----KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
Y + +VN AL++ + Q P ++++AMRYS++ GGKRVRPLL A+CE +GG
Sbjct: 5 YQAQSQTRVNAALEK--LFQAPSPELNRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 63 EDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFT 122
Query: 183 H-VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
+A ++ + ++ + + +A G G+V G+ +D+ S G + LEY+H HKT
Sbjct: 123 ALLAPHLTSRDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTG 182
Query: 242 KLLEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
L+EA+V GA+ G + ++ ++ YAR +GL FQV DDILDV + LGK G D+
Sbjct: 183 ALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGKRQGADI 242
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A K TYP L+G+E AK +A EL QA+ L+ F+A+ A PL LA YI R++
Sbjct: 243 ARDKPTYPALLGLEPAKRYALELRDQALTALSPFDAA-AEPLRELARYIVERRH 295
>gi|350570077|ref|ZP_08938448.1| geranyltranstransferase [Neisseria wadsworthii 9715]
gi|349797362|gb|EGZ51126.1| geranyltranstransferase [Neisseria wadsworthii 9715]
Length = 297
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/268 (42%), Positives = 167/268 (62%), Gaps = 3/268 (1%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPF 147
P +H+AMRY+ L GGKR+RPLL +A+ EL D + A A+EM+H SL+HDD+P
Sbjct: 32 PNTLHEAMRYATLGGGKRLRPLLVLAASELGEADFTAVEQAMAAIEMVHVYSLVHDDMPA 91
Query: 148 LDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAM 207
+DND RR KP H + E+TA+L GDAL +LA + V A + R ++ +A + A
Sbjct: 92 MDNDSLRRGKPTCHVQYDEATALLVGDALQTLAFD-VLSRPANLPAARQLKMVAVLAKAA 150
Query: 208 GVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGG-NAIEVERVR 266
G G+ G+ +D+A+ GK ++ ELE +H KT L+ AAV+ GA+ N ++ R+
Sbjct: 151 GSLGMAGGQAIDLANVGKAMNQAELEQMHGLKTGALIRAAVMLGALCCPNLNDDDMVRLD 210
Query: 267 NYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQ 326
YA+ +GL FQV+DD+LD + LGKTAGKD + K TY KLMG+ +A+S+A L+
Sbjct: 211 GYAKKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKLMGLADARSYAETLVAD 270
Query: 327 AIEELAYFEASKAAPLYFLANYIASRQN 354
A+ L F KAA L LA ++ +R+N
Sbjct: 271 AVSLLVPF-GGKAARLRGLAEFVTARKN 297
>gi|294793724|ref|ZP_06758861.1| geranyltranstransferase [Veillonella sp. 3_1_44]
gi|294455294|gb|EFG23666.1| geranyltranstransferase [Veillonella sp. 3_1_44]
Length = 292
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 115/295 (38%), Positives = 171/295 (57%), Gaps = 8/295 (2%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVK----IHKAMRYSLLAGGKRVRPLLCIASCELVG 119
F++Y+ + + + L E VL P + ++++M YSL+ GGKR+RP+L A E++
Sbjct: 2 FKDYLASSKQNIEQWLGE--VLNSPNQEFEQLYESMNYSLMQGGKRIRPILTKAVLEMLH 59
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
+ + CA+E IHT SL+HDDLP +DND+ RR +H+V+GE AILAGD LL+
Sbjct: 60 KEPADYKEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGLAILAGDGLLTY 119
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A + + N S + + AI + +A G EG+V G+ D+ SE K + L+EL+ +H K
Sbjct: 120 AFQLMTSNTVA-SAQQKLDAIQCVATAAGPEGMVGGQAFDLLSEDKHIPLEELKVLHTGK 178
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T L A+V G ++G N + Y+ C+GLLFQ+ DDILDVT + EELGKT G D
Sbjct: 179 TGALFNASVELGLILGCANNTTRTFLMEYSNCLGLLFQITDDILDVTGTIEELGKTPGSD 238
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K+TY L+G+E AK A L+G + + L L +Y+ R N
Sbjct: 239 IRQHKSTYVSLLGLEQAKHQA-YLVGSQAHDALNLVSYDTTILSALIDYLLERTN 292
>gi|381402160|ref|ZP_09927038.1| geranyltranstransferase [Kingella kingae PYKK081]
gi|380832848|gb|EIC12738.1| geranyltranstransferase [Kingella kingae PYKK081]
Length = 295
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 113/268 (42%), Positives = 168/268 (62%), Gaps = 3/268 (1%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPF 147
P +H+AMRYS L GGKR+RPLL +A+ EL ++ A A+E IH SL+HDD+P
Sbjct: 30 PQTLHEAMRYSTLDGGKRLRPLLVLAASELGNQVQAACEAAMAAVECIHVYSLVHDDMPV 89
Query: 148 LDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAM 207
+DND RR KP H FGE+TA+L GDAL +LA + ++ +S R +R + + A
Sbjct: 90 MDNDSLRRGKPTCHVQFGEATALLVGDALQTLAFDILSTETE-LSTARQLRMVKVLAQAS 148
Query: 208 GVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAV-IGGGNAIEVERVR 266
G G+ G+ VD+ + G+D+S ELE++H KT L+ AAV G + N ++ +
Sbjct: 149 GSLGMAGGQAVDLGNVGRDLSQTELEFMHSLKTGALIRAAVALGGLSCPDLNDEQLAHLD 208
Query: 267 NYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQ 326
YA +GL FQV+DD+LD + LGKTAGKD + K TY KLMG++ A+++A +L+ Q
Sbjct: 209 VYASKLGLAFQVIDDVLDCEADTATLGKTAGKDADANKPTYVKLMGLQAARAYAEQLVAQ 268
Query: 327 AIEELAYFEASKAAPLYFLANYIASRQN 354
AI+ L F+ ++A L LA ++ +R++
Sbjct: 269 AIDALQTFD-TRADHLRTLAQFVVARKS 295
>gi|416999235|ref|ZP_11939904.1| geranyltranstransferase [Veillonella parvula ACS-068-V-Sch12]
gi|333977388|gb|EGL78247.1| geranyltranstransferase [Veillonella parvula ACS-068-V-Sch12]
Length = 292
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 114/295 (38%), Positives = 171/295 (57%), Gaps = 8/295 (2%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVK----IHKAMRYSLLAGGKRVRPLLCIASCELVG 119
F++Y+ + + + L E VL P + ++++M YSL+ GGKR+RP+L A E++
Sbjct: 2 FKDYLASSKQNIEQWLGE--VLNSPNQEFEQLYESMNYSLMQGGKRIRPILTKAVLEMLH 59
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
+ + CA+E IHT SL+HDDLP +DND+ RR +H+V+GE AILAGD LL+
Sbjct: 60 KEPADYKEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGLAILAGDGLLTY 119
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A + + N S + + AI + +A G EG+V G+ D+ SE K + L+EL+ +H K
Sbjct: 120 AFQLMTSNTVA-SAQQKLDAIQCVATAAGPEGMVGGQAFDLLSEDKHIPLEELKVLHTGK 178
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T L A+V G ++G N + Y+ C+GLLFQ+ DDILDVT + EELGKT G D
Sbjct: 179 TGALFNASVELGLILGSANNTTRTFLMEYSNCLGLLFQITDDILDVTGTIEELGKTPGSD 238
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K+TY L+G++ AK A L+G + + L L +Y+ R N
Sbjct: 239 IRQHKSTYVSLLGLDQAKHQA-YLVGSQAHDALNLVSYDTTILSALIDYLLERTN 292
>gi|333370560|ref|ZP_08462555.1| geranyltranstransferase [Desmospora sp. 8437]
gi|332977569|gb|EGK14339.1| geranyltranstransferase [Desmospora sp. 8437]
Length = 298
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 122/294 (41%), Positives = 183/294 (62%), Gaps = 6/294 (2%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQP---PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
+ Y+ KA+ V L E + +P P + +AM YSLLAGGKR+RP+L +A+ E +GG
Sbjct: 4 IQRYLKEKAKSVEARLKE-YMERPAGIPETLREAMAYSLLAGGKRLRPVLTLATAEALGG 62
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
DE A+P ACA+EMIHT SLIHDDLP +D+D+ RR P +H+++GE+ AILAGDALL+ A
Sbjct: 63 DEEKALPFACAVEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKIYGEAMAILAGDALLTRA 122
Query: 181 LEHVAVNIAGVS-PDRVVRAIAEMCSAM-GVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
+ +A P + + C+ G EG+V G+ DI EG++VSL+EL+ IH
Sbjct: 123 FDVMAEGALDAELPRKTALTLIRECAVRAGAEGMVGGQVKDIQGEGREVSLEELQDIHRS 182
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT L+ +V GA++GG E++ + YA +GL FQ+ DD+LDV ++LGK G
Sbjct: 183 KTGDLITGSVRIGAMVGGSGEDELQALTGYAERLGLAFQIQDDVLDVVGDHQKLGKPVGS 242
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
D K+TYP L+G+++++ L+ +A + + E + A L +A+Y+ R
Sbjct: 243 DEVKNKSTYPSLLGLDSSRERIRSLVEEAKQLITAQERIRPARLLAIADYLTVR 296
>gi|336418711|ref|ZP_08598983.1| dimethylallyltranstransferase [Fusobacterium sp. 11_3_2]
gi|336164388|gb|EGN67295.1| dimethylallyltranstransferase [Fusobacterium sp. 11_3_2]
Length = 297
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 114/296 (38%), Positives = 173/296 (58%), Gaps = 9/296 (3%)
Query: 64 FEEYMIRKAE----QVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
F+ Y+ K + ++ K L E L P I K M Y++L GGKR+RP L + EL+
Sbjct: 4 FQVYLKEKTDFFETELKKELKE---LSYPETIAKGMEYAILNGGKRLRPFLLFVTLELLN 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
+ + +A ALEMIH+ SL+HDDLP LDND+ RR K +H+VFGE+ IL GD+LL+
Sbjct: 61 ENIDKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTY 120
Query: 180 ALEHVAV-NIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
A ++ N+ +S +++V I++ G+ G++ G+ +DI SE K + L+ L+YIH H
Sbjct: 121 AFYVLSQKNLELLSSEQIVNIISKTSEYSGINGMIGGQMIDIQSENKKIDLETLKYIHSH 180
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT KL++ + +I + E + YA IGL FQV DDILDV + E+LGK G
Sbjct: 181 KTGKLIKLPIEIACIIANVEKDKKEVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGS 240
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELA-YFEASKAAPLYFLANYIASRQ 353
D+ KATYP ++G++ +K + +A + + F K L LA++I R+
Sbjct: 241 DVDLHKATYPSILGMKESKKILNNTVEKAKQIIKNKFGEEKGKILISLADFIKDRK 296
>gi|253682719|ref|ZP_04863516.1| geranyltranstransferase [Clostridium botulinum D str. 1873]
gi|253562431|gb|EES91883.1| geranyltranstransferase [Clostridium botulinum D str. 1873]
Length = 287
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 104/263 (39%), Positives = 166/263 (63%), Gaps = 2/263 (0%)
Query: 91 IHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDN 150
++ +M+YS+ GGKR+RP+L +++ + + MP ACA+EMIHT SLIHDDLP +DN
Sbjct: 26 LYDSMKYSIEVGGKRIRPILMLSTYSIYKNNYKDIMPMACAIEMIHTYSLIHDDLPGMDN 85
Query: 151 DERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVE 210
D+ RR KP +H+VFGE+ AILAGD LL+ A+ ++ N + + A + A G E
Sbjct: 86 DDLRRGKPTNHKVFGEAIAILAGDGLLNEAM-NIMFNYSLTHDKLALMASKVISEASGAE 144
Query: 211 GLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYAR 270
G++ G+ VDI SEG+++S +L+Y+H +KT +L++++++ GA++GG + E+E + +
Sbjct: 145 GMIGGQVVDIISEGQEISPDKLKYMHKNKTGQLIKSSIIAGAILGGASKEEIEILDEFGS 204
Query: 271 CIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEE 330
+GL FQ+ DDILDV S+ LGK KD + K T+ G++ K EL Q I+
Sbjct: 205 KLGLAFQIKDDILDVIGDSKILGKEVHKDDENNKTTFISHFGLKKCKELCVELTEQCIKL 264
Query: 331 LAYFEASKAAPLYFLANYIASRQ 353
L+Y + L +A ++ R+
Sbjct: 265 LSYI-SKDTKQLKDIALFLMKRE 286
>gi|217069938|gb|ACJ83329.1| unknown [Medicago truncatula]
Length = 214
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 94/134 (70%), Positives = 113/134 (84%)
Query: 60 PTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
P F F+ YMI KA +VNKALD+AV L+ P+K+H+AMRYSLLAGGKRVRP+LC+A+CELVG
Sbjct: 77 PIFNFKSYMIEKATRVNKALDDAVSLREPLKVHEAMRYSLLAGGKRVRPVLCLAACELVG 136
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
G E AMPAACA+EMIHTMSLIHDDLP +DND+ RR KP +H+VFGE A+LAGDALL+
Sbjct: 137 GTEPMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAF 196
Query: 180 ALEHVAVNIAGVSP 193
A EH+AV+ VSP
Sbjct: 197 AFEHIAVSTVDVSP 210
>gi|306820732|ref|ZP_07454359.1| geranyltranstransferase [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304551231|gb|EFM39195.1| geranyltranstransferase [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 295
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 110/280 (39%), Positives = 165/280 (58%), Gaps = 2/280 (0%)
Query: 74 QVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALE 133
+ K +D + L KI ++M YSLL GGKR+RP+L I + +L D + AC LE
Sbjct: 17 HIKKIMD--IKLGYSQKIIESMSYSLLGGGKRLRPVLFIETLKLFDIDFEQYLNIACVLE 74
Query: 134 MIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSP 193
MIHT SLIHDDLP +DND+ RR KP +H V+GE AILAGD+LL+L+ E + + S
Sbjct: 75 MIHTYSLIHDDLPAMDNDDLRRGKPTNHIVYGEDVAILAGDSLLNLSYEVLFDFLYKNSS 134
Query: 194 DRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAV 253
+ A + G+ G++ G+ D+ +E K++ ++ L+YIH +KTAKL+ A+++ A
Sbjct: 135 PNNILACRLISKNAGIFGMIGGQVSDVINENKEIDIENLKYIHYNKTAKLIMASILSAAY 194
Query: 254 IGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGI 313
I + + + +YA IG+ FQ+ DDILDV E +GK+ GKD GK TYPK G+
Sbjct: 195 ISDCSKEYITYLESYAYNIGMAFQISDDILDVVGDKEIVGKSIGKDEQYGKNTYPKYFGL 254
Query: 314 ENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
E +K + A E++ ++ LA+Y+ +R
Sbjct: 255 EESKIKLKNYIDNAKREISKIDSKNIEFFVELADYVGNRN 294
>gi|152979039|ref|YP_001344668.1| polyprenyl synthetase [Actinobacillus succinogenes 130Z]
gi|150840762|gb|ABR74733.1| Polyprenyl synthetase [Actinobacillus succinogenes 130Z]
Length = 296
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 117/263 (44%), Positives = 162/263 (61%), Gaps = 4/263 (1%)
Query: 94 AMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDER 153
AM+Y LL GGKR+RP L A+ +++G D + AA A+E IH SLIHDDLP +DNDE
Sbjct: 36 AMKYGLLLGGKRIRPFLVYATGDMLGADLNALDYAAAAIESIHAYSLIHDDLPAMDNDEL 95
Query: 154 RRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLV 213
RR KP H F +TAILAGDAL + A E + + A + ++ ++ + E+ A GV G+
Sbjct: 96 RRGKPTCHIAFDHATAILAGDALQTFAFEIITKSTA-LCAEQKLKLVQELSRAAGVRGMC 154
Query: 214 AGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIG--GGNAIEVERVRNYARC 271
G+ +D+ +E K V+L ELE IH +KT LL AA++ G + N R++ YA
Sbjct: 155 LGQSLDLLAEQKKVTLAELELIHRNKTGALLTAALMMGFICSPHYANHALACRLKQYADA 214
Query: 272 IGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEEL 331
IGL FQV DDILD+ ++ E+GKT G DL K+TYPK++G++ AKS A EL A++ L
Sbjct: 215 IGLAFQVRDDILDIEGNTVEIGKTVGADLNLDKSTYPKMLGLDGAKSKAQELYQSAVKNL 274
Query: 332 AYFEASKAAPLYFLANYIASRQN 354
A L LA +I R+N
Sbjct: 275 NEISFDTTA-LRALAEFIIHRKN 296
>gi|422296714|ref|ZP_16384379.1| geranyltranstransferase [Pseudomonas avellanae BPIC 631]
gi|407992059|gb|EKG33764.1| geranyltranstransferase [Pseudomonas avellanae BPIC 631]
Length = 295
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 126/294 (42%), Positives = 186/294 (63%), Gaps = 9/294 (3%)
Query: 67 YMIRKAEQVNKALDEAVVLQPPV----KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
Y + +VN AL+ + Q P ++++AMRYS++ GGKRVRPLL A+CE +GG
Sbjct: 5 YQAQSQTRVNAALEG--LFQAPSPELDRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 63 EDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFT 122
Query: 183 H-VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
+A +++ + ++ ++ + +A G G+V G+ +D+ S G + LEY+H HKT
Sbjct: 123 ALLAPHLSSRDAETRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTG 182
Query: 242 KLLEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
L+EA+V GA+ G + ++ ++ YAR +GL FQV DDILDV + LGK G D+
Sbjct: 183 ALIEASVRLGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESDTATLGKRQGADI 242
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A K TYP L+G++ AK +A EL QA+ L+ F+A+ A PL LA YI R++
Sbjct: 243 ARDKPTYPALLGLDAAKGYALELRDQALAALSPFDAA-AEPLRELARYIVERRH 295
>gi|354582557|ref|ZP_09001458.1| Polyprenyl synthetase [Paenibacillus lactis 154]
gi|353198849|gb|EHB64315.1| Polyprenyl synthetase [Paenibacillus lactis 154]
Length = 301
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 183/300 (61%), Gaps = 10/300 (3%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQP-----PVKIHKAMRYSLLAGGKRVRPLLCIASCE 116
PF++YM ++++ E L P P +H++M YSL+AGGKR+RPLL IA+CE
Sbjct: 5 LPFQQYMNDICDRLDS---ELTALFPEGWKVPETLHRSMTYSLMAGGKRLRPLLVIAACE 61
Query: 117 LVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDAL 176
GG A+P ACA+EM+HT SLIHDDLP +D+D+ RR KP +H+VFGE+ AILAGDAL
Sbjct: 62 AAGGSREAALPVACAVEMVHTYSLIHDDLPAMDDDDFRRGKPTNHKVFGEAAAILAGDAL 121
Query: 177 LSLALEHV--AVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEY 234
L+ A + + G+ DRV+ + ++ G G+V G+ D+ E SL++LEY
Sbjct: 122 LTHAFYSIVQSSRKHGIPADRVLSIVEDLAEYAGPRGMVGGQVADMEGEQGLTSLEQLEY 181
Query: 235 IHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGK 294
IH+HKT+ L+ +++ G + G + +++ +R++ + IGL FQ+ DDILD+ +LGK
Sbjct: 182 IHLHKTSDLIMFSLMAGGRVAGCSEAQIDSLRSFGKHIGLAFQIQDDILDLIGDEAKLGK 241
Query: 295 TAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
D+ K TYP +G+E +K L +A ++ + L+ +A+++ +R +
Sbjct: 242 PTQSDVKQEKVTYPFFIGLEASKREVERLTAEAKSAISEGNFPDPSRLHEIADFLLARDH 301
>gi|384044955|ref|YP_005492972.1| Geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Bacillus megaterium WSH-002]
gi|345442646|gb|AEN87663.1| Geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Bacillus megaterium WSH-002]
Length = 298
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 114/256 (44%), Positives = 166/256 (64%), Gaps = 2/256 (0%)
Query: 64 FEEYMIRKAEQVNKALDEAV-VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
+EY+ ++V L E V L PV + ++M YSL AGGKR+RP+L A+ G DE
Sbjct: 7 LKEYISFTKDRVETRLPEVVKALHAPVNLKESMLYSLTAGGKRLRPVLLFATLHAFGKDE 66
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
S + ACA+EMIHT SLIHDDLP +D+D+ RR KP +H+V+GE+TAILAGDALL+ + +
Sbjct: 67 SMGLETACAVEMIHTYSLIHDDLPSMDDDDLRRGKPTNHKVYGEATAILAGDALLTNSFQ 126
Query: 183 HVA-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
++ ++ ++ I E+ A G EG+++G+ D+ E K ++L ELEYIH+HKT
Sbjct: 127 LISEAAHPEITSHMKLQLITELVKASGTEGMISGQVADMEGEKKQLTLDELEYIHLHKTG 186
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
KLL V GA++ ++ + + +++ +GL FQ+ DDILDV S E+LGK G D
Sbjct: 187 KLLGFCVKAGAILAKATPLQQKLLEEFSKHVGLAFQIQDDILDVEGSEEKLGKPIGSDTE 246
Query: 302 SGKATYPKLMGIENAK 317
+ K TYP L+G+E AK
Sbjct: 247 NEKTTYPSLLGMEAAK 262
>gi|422402853|ref|ZP_16479913.1| geranyltranstransferase, partial [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330872288|gb|EGH06437.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 294
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 127/293 (43%), Positives = 184/293 (62%), Gaps = 9/293 (3%)
Query: 67 YMIRKAEQVNKALDEAVVLQPPV----KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
Y + +VN AL++ + Q P ++++AMRYS++ GGKRVRPLL A+CE +GG
Sbjct: 5 YQAQSQTRVNAALEK--LFQAPSPELNRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 63 EDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFT 122
Query: 183 H-VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
+A ++ + ++ + + +A G G+V G+ +D+ S G + LEY+H HKT
Sbjct: 123 ALLAPHLTSRDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTG 182
Query: 242 KLLEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
L+EA+V GA+ G + ++ ++ YAR +GL FQV DDILDV + LGK G D+
Sbjct: 183 ALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGKRQGADI 242
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
A K TYP L+G+E AK +A EL QA+ L+ F+A+ A PL LA YI R+
Sbjct: 243 ARDKPTYPALLGLEPAKRYALELRDQALTALSPFDAA-AEPLRELARYIVERR 294
>gi|421618908|ref|ZP_16059875.1| geranyltranstransferase [Pseudomonas stutzeri KOS6]
gi|409779088|gb|EKN58762.1| geranyltranstransferase [Pseudomonas stutzeri KOS6]
Length = 295
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 127/276 (46%), Positives = 175/276 (63%), Gaps = 6/276 (2%)
Query: 83 VVLQPPV-KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLI 141
V QP + ++++AMRYS++ GGKRVRPLL A+CE + GD++ A AACA+E+IH SL+
Sbjct: 22 VAPQPQLERLYQAMRYSVMNGGKRVRPLLVYAACEALNGDKANADGAACAVELIHAYSLV 81
Query: 142 HDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRV--VRA 199
HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA E +A + PD +R
Sbjct: 82 HDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEAMAQDRHN-PPDATLRLRM 140
Query: 200 IAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGG-GN 258
+ + A G G+V G+ +D+ S G + LE +H HKT L+EA+V GA+ G +
Sbjct: 141 FSVLARAAGPAGMVGGQAIDLGSVGLKLDRDALELMHRHKTGALIEASVQLGALASGHAD 200
Query: 259 AIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKS 318
A + + YAR IGL FQV DDILDV + LGK G D+A K TYP L+G++ AK
Sbjct: 201 ADSLAALSQYARAIGLAFQVQDDILDVESDTATLGKHQGADIARDKPTYPALLGMDAAKV 260
Query: 319 FAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+A EL QA+ L F+ + A PL LA YI R+N
Sbjct: 261 YASELRDQALHALQPFDEA-AEPLRELARYIVERRN 295
>gi|422590457|ref|ZP_16665112.1| geranyltranstransferase [Pseudomonas syringae pv. morsprunorum str.
M302280]
gi|330877558|gb|EGH11707.1| geranyltranstransferase [Pseudomonas syringae pv. morsprunorum str.
M302280]
Length = 295
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 126/294 (42%), Positives = 186/294 (63%), Gaps = 9/294 (3%)
Query: 67 YMIRKAEQVNKALDEAVVLQPPV----KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
Y + +VN AL+ + Q P ++++AMRYS++ GGKRVRPLL A+CE +GG
Sbjct: 5 YQAQSQTRVNAALEG--LFQAPSPELGRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 63 EDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFT 122
Query: 183 H-VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
+A +++ + ++ ++ + +A G G+V G+ +D+ S G + LEY+H HKT
Sbjct: 123 ALLAPHLSSRDAETRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTG 182
Query: 242 KLLEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
L+EA+V GA+ G + ++ ++ YAR +GL FQV DDILDV + LGK G D+
Sbjct: 183 ALIEASVWLGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESDTATLGKRQGADI 242
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A K TYP L+G++ AK +A EL QA+ L+ F+A+ A PL LA YI R++
Sbjct: 243 ARDKPTYPALLGLDAAKGYALELRDQALAALSPFDAA-AEPLRELARYIVERRH 295
>gi|304312212|ref|YP_003811810.1| polyprenyl synthetase [gamma proteobacterium HdN1]
gi|301797945|emb|CBL46167.1| Polyprenyl synthetase [gamma proteobacterium HdN1]
Length = 297
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 121/296 (40%), Positives = 170/296 (57%), Gaps = 4/296 (1%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQ--PPVKIHKAMRYSLLAGGKRVRPLLCIASCELV 118
TF Y+ +VN L+ Q K+ +AM Y+++ GGKR+RP+L A+ E
Sbjct: 2 TFDLHAYLQTAQFRVNTRLEYWFAKQNTTAAKLSEAMHYAVMNGGKRLRPVLAFAAAEAC 61
Query: 119 GGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLS 178
G D S A AACALEM+H+ SL+HDDLP +DND RR P H F E+TAILAGDAL
Sbjct: 62 GTDASLANDAACALEMLHSYSLVHDDLPAMDNDALRRGVPTCHIAFDEATAILAGDALQC 121
Query: 179 LALEHVAVN-IAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHV 237
LA E +A + + ++ + I + A G G+ G+ +D+A+ GK + L LE IH
Sbjct: 122 LAFEVLASSELPSMTTPIKLEMIRSLAVASGTHGMAGGQALDLAASGKLLDLHGLETIHR 181
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
KT L+ AAV GA+ + + YA +GL +QV DDILDVT + LGK G
Sbjct: 182 LKTGCLIRAAVRLGALAAHAPESSLLALDQYASALGLAYQVQDDILDVTGDTLTLGKQQG 241
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
D KATYP+++G++ A++ A L QA++ + F A PL LA+YI +R+
Sbjct: 242 ADAVLDKATYPRILGLQAAQALATHLHDQALQAIQGF-GDGATPLRALASYIVNRR 296
>gi|227499080|ref|ZP_03929217.1| polyprenyl synthetase [Acidaminococcus sp. D21]
gi|352684487|ref|YP_004896472.1| polyprenyl synthetase [Acidaminococcus intestini RyC-MR95]
gi|226904529|gb|EEH90447.1| polyprenyl synthetase [Acidaminococcus sp. D21]
gi|350279142|gb|AEQ22332.1| polyprenyl synthetase [Acidaminococcus intestini RyC-MR95]
Length = 292
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 173/288 (60%), Gaps = 2/288 (0%)
Query: 67 YMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAM 126
Y+ ++E V+ L + + ++ +AM YS LAGGKR+RP+L +A+ + VGG + +
Sbjct: 7 YLKERSELVDGFLKIRIGVGAISRVDEAMAYSALAGGKRLRPILLMAAADAVGGKGTDFL 66
Query: 127 PAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAV 186
P A ALEMIHT SLIHDDLP +DND+ RR + +H+VFG++ A+LAGD LL+ A E V
Sbjct: 67 PLASALEMIHTYSLIHDDLPEMDNDDYRRGRLTNHKVFGQAMAVLAGDGLLTQAFE-VMT 125
Query: 187 NIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEA 246
GV P +V I + G EG+V G+ +DI +E K + E++ +H KT L A
Sbjct: 126 EQKGVDPALMVEIIHLIARCAGPEGMVGGQALDINAEEKHLEPAEMKQLHEAKTGALFIA 185
Query: 247 AVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKAT 306
A+ GA++GGG+ EV + +A GL FQ+ DDILDV S+ +GK AG D K+T
Sbjct: 186 AIRSGALLGGGSKDEVNALTKFATFFGLAFQITDDILDVEGDSKIMGKMAGMDEKMHKST 245
Query: 307 YPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
Y L +E AK+ A + L +A L F +A PL +A ++ +R
Sbjct: 246 YVSLFTLEGAKAMALDTLKKAELTLEPF-GERAEPLLAIARHLYNRNK 292
>gi|425901813|ref|ZP_18878404.1| geranyltranstransferase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397893029|gb|EJL09505.1| geranyltranstransferase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 295
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 127/292 (43%), Positives = 180/292 (61%), Gaps = 5/292 (1%)
Query: 67 YMIRKAEQVNKALDEAVVLQPP--VKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW 124
Y +VN AL+ P ++++AMRYS++ GGKRVRPLL A+CE +G
Sbjct: 5 YQASSQARVNAALETLFHAPSPELARLYQAMRYSVMNGGKRVRPLLAYAACEALGARPEQ 64
Query: 125 AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV 184
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA +
Sbjct: 65 ANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSAL 124
Query: 185 A-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
++ S + ++ ++ + A G G+V G+ +D+ S G + K LEY+H HKT L
Sbjct: 125 LDPRLSDSSAEIRLQMVSTLALAAGPAGMVGGQAIDLGSVGLKLDQKALEYMHRHKTGAL 184
Query: 244 LEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
+EA+V GA+ G E++ ++ YA+ IGL FQV DDILDV + LGK G D+A
Sbjct: 185 IEASVKLGALASGRAEKDELKSLQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIAR 244
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TYP L+G+E AK++A EL QA+ L F+A A PL LA YI R++
Sbjct: 245 DKPTYPALLGLEAAKAYALELRDQALHALRPFDAG-AEPLRELARYIVERRS 295
>gi|269103247|ref|ZP_06155944.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase
[Photobacterium damselae subsp. damselae CIP 102761]
gi|268163145|gb|EEZ41641.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase
[Photobacterium damselae subsp. damselae CIP 102761]
Length = 299
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 122/297 (41%), Positives = 169/297 (56%), Gaps = 13/297 (4%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
+ Y R +Q+ LD QP + KAM+Y L GGKRVRP L + ++G +
Sbjct: 10 LQHYQERNNQQLTHWLDA----QPFADQTLLKAMKYGALLGGKRVRPFLTYVTGNMLGVN 65
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
E A A+E IH SLIHDDLP +D+DE RR +P H F E+TA+LAGDAL +LA
Sbjct: 66 EENLDTPAAAIECIHAYSLIHDDLPAMDDDELRRGQPTCHIAFDEATAVLAGDALQTLAF 125
Query: 182 EHVA---VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
E +A ++I G S + ++ I E+ A G G+ G+ +D+ EGK + L +LE IH H
Sbjct: 126 EILAEGTLSIDGES--QRIKMIKELAQASGAAGMCMGQALDLDGEGKHLGLTQLEQIHKH 183
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEV-ERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
KT L+ AV GA+ G +E+ ++ YA IGL FQV DDILDV +E LGK G
Sbjct: 184 KTGALIRCAVRLGALAAGEKGLEILPQLNTYAEAIGLAFQVQDDILDVISDTETLGKPQG 243
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
D+A K+TYP L+G+E A+ A +L +A++ L L A Y+ R+N
Sbjct: 244 SDIALDKSTYPALLGLEGAQQKAQQLYQEAVQALEAI-PYDTTQLEVFARYLIERKN 299
>gi|150390268|ref|YP_001320317.1| polyprenyl synthetase [Alkaliphilus metalliredigens QYMF]
gi|149950130|gb|ABR48658.1| Polyprenyl synthetase [Alkaliphilus metalliredigens QYMF]
Length = 295
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 172/291 (59%), Gaps = 4/291 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
+EY I ++++ LD V + AMRYS+ AGGKR+RP++ IA+ L +
Sbjct: 7 MKEYQILTDKKLHHYLD--VKEDKNKTVIDAMRYSIFAGGKRLRPIVAIATYNLFKDNLE 64
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
+P ACALEMIHT SLIHDDLP +D+D RR K +H+V+GE AILAGDALL+ A E
Sbjct: 65 EVLPYACALEMIHTYSLIHDDLPAMDDDNYRRGKLTNHKVYGEGIAILAGDALLNYAFEI 124
Query: 184 VAVNIAGVSPDRV-VRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAK 242
+ + S V ++AI E+ A G+ G++ G+ VD+ SE K V L YIH +KTA
Sbjct: 125 MISHARTQSNANVHLQAIEEIAKAAGMNGMIGGQVVDLESENKQVDKNTLNYIHYNKTAA 184
Query: 243 LLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
L+ +A GA+I ++ + + + IGL FQ+ DDILD+ ++LGK G D+ +
Sbjct: 185 LIISAFKVGAIIAEATETDIAHMNSLGKNIGLAFQIQDDILDIIGDEKKLGKDIGSDVEN 244
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
K+TYP L G++ + L ++++ ++ L+ L++Y+ +R+
Sbjct: 245 NKSTYPSLYGLQTSIDEVKRLTTN-VDKVLNIYGKRSRFLHDLSHYLVNRE 294
>gi|387818091|ref|YP_005678436.1| octaprenyl-diphosphate synthase [Clostridium botulinum H04402 065]
gi|322806133|emb|CBZ03701.1| octaprenyl-diphosphate synthase [Clostridium botulinum H04402 065]
Length = 284
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 104/242 (42%), Positives = 153/242 (63%), Gaps = 1/242 (0%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLD 149
KI++AM YSL AGGKR+RP+L + + L D AMP A A+EMIHT SLIHDDLP +D
Sbjct: 22 KIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMD 81
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGV 209
ND+ RR KP +H++FGE+ AILAGDALL+ A+ ++ + + ++ V+A + A GV
Sbjct: 82 NDDLRRGKPTNHKIFGEAIAILAGDALLNEAM-NIMFEYSLKNGEKAVKACYTIAKAAGV 140
Query: 210 EGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYA 269
+G++ G+ VDI SE K + L EL Y+H KT L++++++ GA++G ++E + Y
Sbjct: 141 DGMIGGQVVDILSEDKSIPLDELYYMHKKKTGALIKSSILAGAILGSATYTDIELLGEYG 200
Query: 270 RCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIE 329
+GL FQ+ DDILDV + LGK D + K T+ K+ GIE E+ + +
Sbjct: 201 DNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIEKCNELCTEMTNKCFD 260
Query: 330 EL 331
L
Sbjct: 261 IL 262
>gi|171464023|ref|YP_001798136.1| polyprenyl synthetase [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171193561|gb|ACB44522.1| Polyprenyl synthetase [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 300
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 123/301 (40%), Positives = 183/301 (60%), Gaps = 17/301 (5%)
Query: 62 FPFEEYM----IRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCEL 117
F F E++ IR + +++ LD A + P ++H+A+RY+ GGKR+RPLL A+ +L
Sbjct: 5 FSFHEWVTSHSIRTEQTLDRLLDSAQTI--PHRLHEAIRYAAQGGGKRIRPLLVYAAGQL 62
Query: 118 VGGDESWAMP------AACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAIL 171
G++S +P AA A+E IH SL+HDDLP +D+D RR +P H+ F E+TA+L
Sbjct: 63 --GNKSDVVPVEFLDAAAVAIECIHAYSLVHDDLPCMDDDYLRRGRPTVHKAFDEATALL 120
Query: 172 AGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKE 231
GDAL + A E +A N G + R+ R I+ + +A G G+ G+ +D+ S GK + L+
Sbjct: 121 VGDALQTRAFEILA-NTNGDAQVRL-RMISTLAAASGSRGMAGGQAIDLESVGKKLDLQG 178
Query: 232 LEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEE 291
L+ +H KT LL AV G + N ++ ++++Y++ +GL FQ+VDD+LD T S+
Sbjct: 179 LKQMHAMKTGALLSCAVELGGIAAHLNFAQMMQLQSYSKSLGLAFQIVDDVLDATADSQT 238
Query: 292 LGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIAS 351
LGKTAGKD A+ K TY LMG++ A+ A EL AI L F AS A L LA + +
Sbjct: 239 LGKTAGKDAAANKPTYVTLMGLDYAQKQAKELQEVAIASLDSFGAS-AQALKDLALLVVN 297
Query: 352 R 352
R
Sbjct: 298 R 298
>gi|120555348|ref|YP_959699.1| polyprenyl synthetase [Marinobacter aquaeolei VT8]
gi|120325197|gb|ABM19512.1| farnesyl-diphosphate synthase [Marinobacter aquaeolei VT8]
Length = 298
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 183/292 (62%), Gaps = 4/292 (1%)
Query: 65 EEYMIRKAEQVNKALDEAVVLQPPV-KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
E Y+ + QV++ LD + ++ + MRYS+L GGKRVRP LC+A+ +G DES
Sbjct: 9 EAYLDQCRHQVDRELDRCLARNATSERLQETMRYSVLGGGKRVRPALCMAAARAMGSDES 68
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
A+ ACALE+IH SL+HDDLP +D+D+ RR +P +H F E++AILAGDAL +LA
Sbjct: 69 TALAPACALELIHAYSLVHDDLPAMDDDDLRRGRPTAHIAFDEASAILAGDALQTLAFAL 128
Query: 184 VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
++ + +S + V I+E+ A G +G+V G+ +D+ S G+ +S+ +LE +H HKT L
Sbjct: 129 LS-DAPALSDRQRVTMISELARASGHQGMVGGQAIDLESVGQQLSVAQLETMHRHKTGAL 187
Query: 244 LEAAVVCGAVIGGG-NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
+EA+V GA+ ++ + +YA +GL FQV DD+LD+ +E +GK G D A
Sbjct: 188 IEASVRLGALTSETVTECQLSNLTDYASALGLAFQVQDDLLDIEGDTEVIGKRQGSDAAR 247
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TYP L+GIE A+ LL +A+ L F+ S+A L +A+Y+ +R +
Sbjct: 248 AKPTYPALLGIEGARQHLARLLDEALSALESFD-SEADTLRAMADYVVARSH 298
>gi|282850211|ref|ZP_06259590.1| putative geranyltranstransferase [Veillonella parvula ATCC 17745]
gi|282579704|gb|EFB85108.1| putative geranyltranstransferase [Veillonella parvula ATCC 17745]
Length = 292
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 115/295 (38%), Positives = 171/295 (57%), Gaps = 8/295 (2%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVK----IHKAMRYSLLAGGKRVRPLLCIASCELVG 119
F++Y+ + + + L E VL P + ++++M YSL+ GGKR+RP+L A E++
Sbjct: 2 FKDYLASSKQNIEQWLGE--VLNSPNQEFEQLYESMNYSLMQGGKRIRPILTKAVLEMLH 59
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
+ + CA+E IHT SL+HDDLP +DND+ RR +H+V+GE AILAGD LL+
Sbjct: 60 KEPADYKEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGLAILAGDGLLTY 119
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A + + N S + + AI + +A G EG+V G+ D+ SE K + L+EL+ +H K
Sbjct: 120 AFQLMTSNTVA-SAQQKLDAIQCVATAAGPEGMVGGQAFDLLSEDKHIPLEELKVLHSGK 178
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T L A+V G ++G N + Y+ C+GLLFQ+ DDILDVT + EELGKT G D
Sbjct: 179 TGALFNASVELGLILGCANNTTRTALMEYSNCLGLLFQITDDILDVTGTIEELGKTPGSD 238
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K+TY L+G+E AK A L+G + + L L +Y+ R N
Sbjct: 239 IRQHKSTYVSLLGLEQAKHQA-YLVGSQAHDALNLVSYDTTILSALIDYLLERTN 292
>gi|77361281|ref|YP_340856.1| geranyltranstransferase [Pseudoalteromonas haloplanktis TAC125]
gi|76876192|emb|CAI87414.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
synthase) [Pseudoalteromonas haloplanktis TAC125]
Length = 295
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 120/284 (42%), Positives = 171/284 (60%), Gaps = 4/284 (1%)
Query: 72 AEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACA 131
A +N D+++ +K A YSL+ GGKR+RP L A+ +++G D+ A A
Sbjct: 15 ANTLNLYFDQSLNTDETIK--AATHYSLMNGGKRLRPFLVYATGKMLGADKQDLDVLAAA 72
Query: 132 LEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGV 191
+E IH+ SL+HDDLP +D+DE RR +P H V+GE+ AILAGDAL +LA E +A +
Sbjct: 73 IECIHSYSLVHDDLPAMDDDELRRGRPTCHIVYGEAHAILAGDALQALAFELIAKHNFNC 132
Query: 192 SPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCG 251
S V+ IAE+ A G++G+VAG+ +DIA+ K +++ ELE IH KT L+ A+ G
Sbjct: 133 SAQAQVKMIAELAHASGLQGMVAGQGLDIAATDKVITVAELERIHKLKTGALISCAITLG 192
Query: 252 AVIGGG-NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKL 310
A+ + +E + + IGL FQV DDILDV + LGK G D+A+ KATYP L
Sbjct: 193 ALCSNNVSQNTLENLATFGYAIGLAFQVHDDILDVEGDTVTLGKPQGSDIAANKATYPAL 252
Query: 311 MGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+G+ AK A L+ QA LA +A +A L LANY+ R +
Sbjct: 253 LGMLGAKEKAQNLIQQAHAALANIDADTSA-LASLANYLIERDH 295
>gi|398798195|ref|ZP_10557496.1| geranylgeranyl pyrophosphate synthase [Pantoea sp. GM01]
gi|398100912|gb|EJL91140.1| geranylgeranyl pyrophosphate synthase [Pantoea sp. GM01]
Length = 299
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 127/287 (44%), Positives = 169/287 (58%), Gaps = 8/287 (2%)
Query: 73 EQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAAC 130
++VN+AL + P + AM Y L GGKR+RP L A+ E++ D + A
Sbjct: 12 QRVNQALTRLIDPLPFQSSPLVNAMEYGALLGGKRLRPFLVYATGEMLKADAASLDVPAA 71
Query: 131 ALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVN-IA 189
A+E IH SLIHDDLP +D+D RR +P H +GE TAILAGDAL +LA +A +
Sbjct: 72 AVECIHAYSLIHDDLPAMDDDALRRGQPTCHIKYGEDTAILAGDALQTLAFSILADQPMP 131
Query: 190 GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVV 249
GVS + + I+E+ A GV G+ G+ +D+A+EGK + L +LE IH HKT L+ AAV
Sbjct: 132 GVSAEARIAMISELAQASGVAGMCGGQALDLAAEGKRIDLAQLEQIHRHKTGALIRAAVR 191
Query: 250 CGAVIGG--GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATY 307
GA+ G G A + + YA IGL FQV DDILDV + LGKT G D A GK+TY
Sbjct: 192 LGALAAGERGRA-ALPVLDTYANAIGLAFQVQDDILDVVGDTAVLGKTQGSDQALGKSTY 250
Query: 308 PKLMGIENAKSFAGELLGQAIEELAYFEAS--KAAPLYFLANYIASR 352
P LMG+ENA+S A +L +A+ L A L LA++I R
Sbjct: 251 PALMGLENARSKAWDLYQEALGALDILAAQSYNTIALQALASFIIER 297
>gi|399522387|ref|ZP_10763051.1| farnesyl-diphosphate synthase [Pseudomonas pseudoalcaligenes CECT
5344]
gi|399109821|emb|CCH39612.1| farnesyl-diphosphate synthase [Pseudomonas pseudoalcaligenes CECT
5344]
Length = 295
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 131/294 (44%), Positives = 181/294 (61%), Gaps = 9/294 (3%)
Query: 67 YMIRKAEQVNKALDEAVVLQPPV----KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
Y R +V+ AL+ + Q P ++++AMRYS++ GGKRVRPLL A+CE + GD
Sbjct: 5 YQKRCQSRVDTALE--ALFQAPRSELERLYQAMRYSVMNGGKRVRPLLVYAACEALEGDL 62
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E++AILAGD L SLA E
Sbjct: 63 ERADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEASAILAGDGLQSLAFE 122
Query: 183 HVAVNIAGVSPDRVVRAIAEMCS-AMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
+A + + E+ S A G G+V G+ +D+ S G+ + + LE +H HKT
Sbjct: 123 VLADHRRNPQDAETRLQMIELLSQAAGPAGMVGGQAIDLGSVGRRLDQQALEVMHRHKTG 182
Query: 242 KLLEAAVVCGAVIGGG-NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
L+EA+V GA+ G + + + + YAR IGL FQV DDILDV + LGKT GKD
Sbjct: 183 ALIEASVALGALASGNIDELAHKALLQYARAIGLAFQVQDDILDVESDTATLGKTQGKDE 242
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A K TYP L+G++ AK +A EL QA+ L F + A PL LA YI R+N
Sbjct: 243 AHDKPTYPALLGLDAAKDYALELRDQALHVLCPF-GNSAEPLRELARYIVERRN 295
>gi|91777309|ref|YP_552517.1| farnesyl-diphosphate synthase [Burkholderia xenovorans LB400]
gi|91689969|gb|ABE33167.1| farnesyl-diphosphate synthase [Burkholderia xenovorans LB400]
Length = 293
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 126/294 (42%), Positives = 175/294 (59%), Gaps = 6/294 (2%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
FE++M E+V ALD + + P +H+AMRY++L GGKRVRPLLC A+ EL G
Sbjct: 1 MTFEQWMRSVLERVETALDHYLPGEATEPATLHEAMRYAVLGGGKRVRPLLCHAAGELTG 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
AA ALEMIH SL+HDD+P +D+D RR KP H + E+TA+L GDAL S
Sbjct: 61 ARAECLDAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQ 120
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A VA+ ++P + + E+ A G G+ G+ +D+AS G ++ +LE +H K
Sbjct: 121 AF--VALTSDVLAPAQQAALVRELALASGSVGMCGGQAIDLASVGHTLTRTQLETMHRMK 178
Query: 240 TAKLLEAAVVCGAVIGGG-NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
T LL AAV GA+ G +A + + Y+ +GL FQVVDDILDVT S LGKTAGK
Sbjct: 179 TGALLRAAVRMGALAGETPDAAAMRSLDAYSAAVGLAFQVVDDILDVTTDSATLGKTAGK 238
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
D GK TY ++G++ +++ A +L A LA F A +A L LA+ + +R
Sbjct: 239 DAKDGKPTYVSIIGLDASRALAAQLRSDAHAALAPFGA-RAQRLAELADLVVNR 291
>gi|427405648|ref|ZP_18895853.1| hypothetical protein HMPREF9161_00213 [Selenomonas sp. F0473]
gi|425708489|gb|EKU71528.1| hypothetical protein HMPREF9161_00213 [Selenomonas sp. F0473]
Length = 291
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 120/276 (43%), Positives = 169/276 (61%), Gaps = 4/276 (1%)
Query: 79 LDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTM 138
LD VL K+ +M YSL+AGGKR+RP+L +A+ + VG D + AACALEMIHT
Sbjct: 20 LDHTDVLDR--KLRASMAYSLMAGGKRLRPILLMAAADAVGADGMKFITAACALEMIHTY 77
Query: 139 SLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVR 198
SLIHDDLP +DND+ RR K +H+++G+ AILAGDALL+LA V + GV DR +R
Sbjct: 78 SLIHDDLPAMDNDDYRRGKLTNHKIYGDGIAILAGDALLTLAFT-VILRQRGVPVDRHLR 136
Query: 199 AIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGN 258
+ E+ A G EG+V G+ +D+ +E + +SL+EL IH+ KT L AA+ GAV+ G +
Sbjct: 137 VVDEISRAAGAEGMVGGQVLDLEAENRRISLEELRRIHMGKTGALFRAALRSGAVLAGAS 196
Query: 259 AIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKS 318
++ + YA GL FQ+ DDILDV ++E++GK G D + K+TY L + A+
Sbjct: 197 EEQLAALTAYADHFGLAFQITDDILDVVGNAEDIGKPVGSDEKNRKSTYVTLTSLREARE 256
Query: 319 FAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A A+ L F +AA L L Y+ R+
Sbjct: 257 LAQRTADDAVAALDIF-GEEAAFLRELVTYLVHRKQ 291
>gi|406835647|ref|ZP_11095241.1| polyprenyl synthetase [Schlesneria paludicola DSM 18645]
Length = 312
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 130/309 (42%), Positives = 184/309 (59%), Gaps = 22/309 (7%)
Query: 64 FEEYMIRKAEQVNKALDEAVV--LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
FE + ++VN L V + P K+ ++M YSLLAGGKR+RP+L + +CE GGD
Sbjct: 8 FESDLATFRDRVNARLANYVAPEIDSPSKLSESMAYSLLAGGKRLRPILVLLACEACGGD 67
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
A+PAACA+EMIHT SLIHDDLP +D+D+ RR + +H+V+GE+ AILAGDALL+LA
Sbjct: 68 SDAALPAACAIEMIHTYSLIHDDLPAMDDDDYRRGRLTNHKVYGEAMAILAGDALLTLAF 127
Query: 182 EHVAVNIAGVSPDRVVRA-IAEMCSAMGVEGLVAGEFVDIASE---------------GK 225
E +A +I P V A A++ SA G G+V G+ D+ +E G+
Sbjct: 128 EVMARDI---QPGGVAAACCADLASAAGWCGMVGGQVADLEAEQQSADRQLGSATDNSGE 184
Query: 226 DVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDV 285
L +LE IH KT +LL +AV GA + V R+ + + +GL FQ+ DD+LDV
Sbjct: 185 SAGLAQLEAIHRRKTGRLLMSAVTLGARVAQAKPELVNRLEEFGKRVGLAFQIADDLLDV 244
Query: 286 TKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFL 345
T + +LGK GKD GK TYP L+GI+ ++ A +L+ +A L +AAPL L
Sbjct: 245 TGDATKLGKNVGKDATLGKMTYPGLLGIDGSRRKADDLIDEACRLLEPL-GERAAPLMEL 303
Query: 346 ANYIASRQN 354
A ++ R +
Sbjct: 304 ARFVTRRDH 312
>gi|237742320|ref|ZP_04572801.1| dimethylallyltransferase [Fusobacterium sp. 4_1_13]
gi|229429968|gb|EEO40180.1| dimethylallyltransferase [Fusobacterium sp. 4_1_13]
Length = 297
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 114/293 (38%), Positives = 171/293 (58%), Gaps = 3/293 (1%)
Query: 64 FEEYMIRKAEQVNKALD-EAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
F+ Y+ K + L E L P I K M Y+ L GGKR+RP L A+ EL+ +
Sbjct: 4 FQVYLKEKTDFFETELKRELKELSYPETIAKGMEYATLNGGKRLRPFLLFATLELLNENI 63
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
+ +A ALEMIH+ SL+HDDLP LDND+ RR K +H+VFGE+ IL GD+LL+ A
Sbjct: 64 KKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFY 123
Query: 183 HVAV-NIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
++ N+ +S +++V I++ G+ G++ G+ +DI SE K + L+ L+YIH HKT
Sbjct: 124 VLSQKNLEFLSSEQLVNIISKTSEYAGINGMIGGQMIDIESENKKIGLETLKYIHSHKTG 183
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
KL++ + +I + + + YA IGL FQV DDILDV + E+LGK G D+
Sbjct: 184 KLIKLPIEIACIIANVEKDKRKVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGSDVD 243
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEEL-AYFEASKAAPLYFLANYIASRQ 353
KATYP ++G++ +K + + +A E + F K L LA++I +R
Sbjct: 244 LHKATYPSILGMKESKKILNDTVEKAKEIIKTKFGEEKGKVLISLADFIKNRN 296
>gi|253995978|ref|YP_003048042.1| polyprenyl synthetase [Methylotenera mobilis JLW8]
gi|253982657|gb|ACT47515.1| Polyprenyl synthetase [Methylotenera mobilis JLW8]
Length = 303
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 128/286 (44%), Positives = 174/286 (60%), Gaps = 7/286 (2%)
Query: 71 KAEQ--VNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAM 126
KA+Q + LDEA+ + P +H AMRYSLL GGKRVR LLC A+ EL + + A
Sbjct: 19 KAKQGHIEIVLDEALPSETTAPQVLHDAMRYSLLGGGKRVRALLCYAAAELCATNATIAD 78
Query: 127 PAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAV 186
AACA+EMIH SL+HDD+P +DND+ RR KP+ H+ + ++TA+L GDAL SLA + ++
Sbjct: 79 AAACAVEMIHAYSLVHDDMPCMDNDDLRRGKPSCHKQYDDATALLVGDALQSLAFDVLST 138
Query: 187 NIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEA 246
S ++ + + + A G G+ G+ +D+AS GK +S ELE +H KT L++A
Sbjct: 139 PTLCESANQQISMLNILAKASGSLGMAGGQAIDLASVGKALSQHELENMHKLKTGALIQA 198
Query: 247 AVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKAT 306
A + GA G A ++ V YA IGL FQVVDDILDV + LGKTAGKD S K T
Sbjct: 199 AALLGA--SSGTAEQMSAVIVYAEHIGLAFQVVDDILDVEADTSTLGKTAGKDADSNKPT 256
Query: 307 YPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
Y ++G++ AK A +L AI L F + A L LA +I R
Sbjct: 257 YVTILGLDQAKKLADQLYETAISALTPF-GNDAKRLRELAGFILHR 301
>gi|298528183|ref|ZP_07015587.1| Polyprenyl synthetase [Desulfonatronospira thiodismutans ASO3-1]
gi|298511835|gb|EFI35737.1| Polyprenyl synthetase [Desulfonatronospira thiodismutans ASO3-1]
Length = 298
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 118/295 (40%), Positives = 173/295 (58%), Gaps = 9/295 (3%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQP-PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
F++ + +A+++ L+ + + P ++ +AM YSL+AGGKRVRP+LC+A E+ G
Sbjct: 5 FKQELASRAKEIEDYLESCLQFEGVPGELQQAMEYSLMAGGKRVRPVLCLAWGEMTGACT 64
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
+P A LEMIHT SL+HDDLP +DND+ RR KP SH+ FGE+ AILAGD LL+ A
Sbjct: 65 KDILPFASGLEMIHTYSLVHDDLPAMDNDDLRRGKPTSHKKFGEALAILAGDGLLTQAF- 123
Query: 183 HVAVNIAGVSP-DRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKD-VSLKELEYIHVHKT 240
A+ + P + V+ A + A G G+V G+ +D+ + G++ + L +L+ +H KT
Sbjct: 124 --AMMLKTSFPAENVLAAAGTVAQAAGPAGMVGGQCIDMRATGRESMELVDLKGMHAMKT 181
Query: 241 AKLLEAAVVCGAVIGGG---NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
LL AA GA++ G N + NY IGL FQ+VDDILDVT + LGK G
Sbjct: 182 GALLRAACCSGAILAGSDPENGRDTLNAYNYGSNIGLAFQIVDDILDVTGDEKSLGKPVG 241
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
D + K+TYP+ +G+E ++ A +A L ++ LY LA YI R
Sbjct: 242 SDESVNKSTYPRFLGLEKSRELAQTAADEAKTCLRDYQGQGRDFLYRLAQYIVDR 296
>gi|299533199|ref|ZP_07046583.1| Polyprenyl synthetase [Comamonas testosteroni S44]
gi|298718729|gb|EFI59702.1| Polyprenyl synthetase [Comamonas testosteroni S44]
Length = 313
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 116/296 (39%), Positives = 170/296 (57%), Gaps = 1/296 (0%)
Query: 60 PTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
P F +M + + AL V + P + +AMRY++L GGKR+RPLL A+ E VG
Sbjct: 18 PALDFSVWMQERLARTEDALSRWVGINAPAGLGEAMRYAVLDGGKRLRPLLVWAAAEAVG 77
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
G + + A CA+E+IH SL+HDD+P +DND RR KP H FGE++A+LAGDAL +L
Sbjct: 78 GLAAATLRAGCAVELIHAYSLVHDDMPCMDNDTMRRGKPTVHVQFGEASALLAGDALQAL 137
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A E + G+ + + +A G +G+ G+ +D+AS GK +S +L +H K
Sbjct: 138 AFELLLPEDDGIPCSMQAKLCRLLGAAAGSQGMAGGQAIDLASVGKQLSEAQLREMHRLK 197
Query: 240 TAKLLEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
T LL +V+ GA +A + + +Y + +G+ FQVVDDILDV S LGKTAGK
Sbjct: 198 TGALLLGSVLMGAACNAQTDARALAALTDYGQALGVAFQVVDDILDVVADSATLGKTAGK 257
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
D A+ K T+ L+G+E A++ A +L QA L + L LA+ + R +
Sbjct: 258 DAANDKPTFVSLLGLEAARAHAEQLRQQAHAALTRSGLADTQALGALADMVVQRTH 313
>gi|300313126|ref|YP_003777218.1| geranyltranstransferase [Herbaspirillum seropedicae SmR1]
gi|300075911|gb|ADJ65310.1| geranyltranstransferase (farnesyl-diphosphate synthase) protein
[Herbaspirillum seropedicae SmR1]
Length = 311
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 130/292 (44%), Positives = 175/292 (59%), Gaps = 15/292 (5%)
Query: 73 EQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACAL 132
E +N+ L A V+ P ++H+AMRY+ + GGKRVRPLL A+ EL + AA A+
Sbjct: 25 EVLNRFLPSASVV--PARLHEAMRYTAMDGGKRVRPLLVYAAGELFDTPRALLERAAAAV 82
Query: 133 EMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNI---A 189
EMIH SL+HDD+P +D+D RR KP H + E+TA+L GDAL + A + +A + A
Sbjct: 83 EMIHVYSLVHDDMPCMDDDALRRGKPTVHIRYDEATALLVGDALQAQAFDTLAAPLESEA 142
Query: 190 GVS----PDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLE 245
G + P R +R + + A G G+ G+ +D+AS G +SL ELE +H KT LL
Sbjct: 143 GSADAGLPARQLRMVKLLAEAAGSVGMCGGQAIDLASVGMTLSLAELEQMHRLKTGALLR 202
Query: 246 AAVVCGAVIGGGNAI---EVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
AAV+ GA+ GG A+ E + +YAR IGL FQVVDDILD T S LGKTAGKD A
Sbjct: 203 AAVLLGAL--GGKALTAAESAALDDYARAIGLAFQVVDDILDATADSATLGKTAGKDAAD 260
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TY ++G+ +++ AG L A E LA F KA L LA+ I R+
Sbjct: 261 NKPTYVSILGLAESQALAGRLQADAHEALAPF-GGKARRLRELADLIVQRKT 311
>gi|452746756|ref|ZP_21946566.1| geranyltranstransferase [Pseudomonas stutzeri NF13]
gi|452009233|gb|EME01456.1| geranyltranstransferase [Pseudomonas stutzeri NF13]
Length = 296
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 183/297 (61%), Gaps = 13/297 (4%)
Query: 66 EYMIRKAEQVNKALDEAVVLQPPV----KIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
+Y ++V+ L+ V PP+ ++++AMRYS++ GGKRVRPLL A+CE + GD
Sbjct: 5 DYQKSCQQRVDSCLETLFV--PPLPQLERLYQAMRYSVMNGGKRVRPLLVYAACEALNGD 62
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
++ A ACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 63 KASADGGACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 122
Query: 182 EHVAVNIAGVSPDRV---VRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
E A+ A +P +R A + A G G+V G+ +D+ S G + LE +H H
Sbjct: 123 E--AMAQAEHNPQDATLRLRMFAVLARAAGPAGMVGGQAIDLGSVGLKLDRNALELMHRH 180
Query: 239 KTAKLLEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
KT L+EA+V GA+ G +A + + YAR IGL FQV DDILDV + LGK G
Sbjct: 181 KTGALIEASVQLGALASGHADADNLASLSQYARAIGLAFQVQDDILDVESDTATLGKHQG 240
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
D+A K TYP L+G++ AK++A EL QA+ L F+ + A PL LA YI R+N
Sbjct: 241 ADIARDKPTYPALLGMDAAKAYALELRDQALHALRPFD-TAAEPLRELARYIVERRN 296
>gi|228998970|ref|ZP_04158552.1| Geranyltranstransferase [Bacillus mycoides Rock3-17]
gi|229006508|ref|ZP_04164153.1| Geranyltranstransferase [Bacillus mycoides Rock1-4]
gi|228754742|gb|EEM04142.1| Geranyltranstransferase [Bacillus mycoides Rock1-4]
gi|228760587|gb|EEM09551.1| Geranyltranstransferase [Bacillus mycoides Rock3-17]
Length = 297
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 128/291 (43%), Positives = 178/291 (61%), Gaps = 12/291 (4%)
Query: 65 EEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW 124
EE + R A Q LQ P + +AM YSL AGGKR+RPLL A+ + +
Sbjct: 18 EEQLARYANQ----------LQCPNVLREAMTYSLEAGGKRLRPLLLFATLQAFEKEREL 67
Query: 125 AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV 184
+ AACALEMIHT SLIHDDLP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + V
Sbjct: 68 GIGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTHAFQVV 127
Query: 185 -AVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
A + +S + +R E+ A G EG+VAG+ D+ +EGK + L ELEYIH HKT +L
Sbjct: 128 TAYHHQDISTETKLRLALELAKAAGPEGMVAGQVADMEAEGKRLELSELEYIHKHKTGRL 187
Query: 244 LEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASG 303
LE AV+ GAV+ G + +++ +A+ IGL FQ+ DDILDV + EE+GK G D ++
Sbjct: 188 LEYAVLAGAVLAGATPEQEKKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNE 247
Query: 304 KATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K+TY L I+ AK E + +A + +A + L + + IA R N
Sbjct: 248 KSTYTTLFTIDEAKCILEETIVKAKDAIASLQLQDEY-LLSICDLIAKRNN 297
>gi|28867927|ref|NP_790546.1| geranyltranstransferase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213969291|ref|ZP_03397429.1| geranyltranstransferase [Pseudomonas syringae pv. tomato T1]
gi|301381795|ref|ZP_07230213.1| geranyltranstransferase [Pseudomonas syringae pv. tomato Max13]
gi|302061005|ref|ZP_07252546.1| geranyltranstransferase [Pseudomonas syringae pv. tomato K40]
gi|302130543|ref|ZP_07256533.1| geranyltranstransferase [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|28851163|gb|AAO54241.1| geranyltranstransferase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213925969|gb|EEB59526.1| geranyltranstransferase [Pseudomonas syringae pv. tomato T1]
Length = 295
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 125/294 (42%), Positives = 185/294 (62%), Gaps = 9/294 (3%)
Query: 67 YMIRKAEQVNKALDEAVVLQPPV----KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
Y + +VN AL+ + Q P ++++AMRYS++ GGKRVRPLL A+CE +GG
Sbjct: 5 YQAQSQTRVNAALEG--LFQAPSPELSRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 63 EDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFT 122
Query: 183 H-VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
+A +++ + ++ ++ + +A G G+V G+ +D+ S G + LEY+H HKT
Sbjct: 123 ALLAPHLSSRNAATRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTG 182
Query: 242 KLLEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
L+EA+V GA+ G + ++ ++ YAR +GL FQV DDILDV + LGK G D+
Sbjct: 183 ALIEASVRLGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESDTATLGKRQGADI 242
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A K TYP L+G++ AK +A EL QA+ L+ F+ + A PL LA YI R++
Sbjct: 243 ARDKPTYPALLGLDAAKGYALELRDQALAALSLFD-TTAEPLRELARYIVERRH 295
>gi|300113747|ref|YP_003760322.1| polyprenyl synthetase [Nitrosococcus watsonii C-113]
gi|299539684|gb|ADJ28001.1| Polyprenyl synthetase [Nitrosococcus watsonii C-113]
Length = 296
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 113/293 (38%), Positives = 178/293 (60%), Gaps = 4/293 (1%)
Query: 65 EEYMIRKAEQVNKALDEAV--VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
E+++ +V +AL++ + +PP ++H+AMRY++L GGKR+RPLL ++ VG E
Sbjct: 5 EDWVNALQARVEQALEKTLPPASKPPKRLHEAMRYAVLGGGKRLRPLLTYSAGMAVGVAE 64
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
+ A A+E+IH SL+HDDLP +DND+ RR +P H+ FGE+TA+LAGDAL +LA
Sbjct: 65 AALDAPASAVELIHAYSLVHDDLPSMDNDDLRRGQPTCHKAFGETTALLAGDALQALAFR 124
Query: 183 HVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAK 242
+A + + + + + + A G G+ G+ +D+ S G ++L E+E +H KT
Sbjct: 125 ILAEPASTIPAENQINMLKLLAEAAGSRGMAGGQAIDLDSVGIQLTLSEMETMHRLKTGA 184
Query: 243 LLEAAVVCGAVIGGG-NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
L+ A+V+ GA +E++ ++A+CIGL FQ+ DD+LDV + LGK G D A
Sbjct: 185 LIRASVLLGAWCQPAITQDTIEKLDHFAQCIGLAFQIQDDVLDVESDTATLGKPQGSDKA 244
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TYP L+G+ AK+ A LL A + L +AS L +LA++I R++
Sbjct: 245 QDKPTYPSLLGLIQAKARAQSLLEDAHQALRAIDASTEH-LEWLADFIVKRRH 296
>gi|329298746|ref|ZP_08256082.1| polyprenyl synthetase [Plautia stali symbiont]
Length = 299
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 124/286 (43%), Positives = 171/286 (59%), Gaps = 6/286 (2%)
Query: 73 EQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAAC 130
E+VN+AL + P + AM+Y L GGKR+RP L A+ E++ + + A
Sbjct: 12 ERVNQALTRLIDPLPFQSSPLVNAMQYGALLGGKRLRPFLVYATGEMLRAEAASLDAPAA 71
Query: 131 ALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVN-IA 189
A+E IH SLIHDDLP +D+D RR +P H +GE TAILAGDAL +LA +A +
Sbjct: 72 AVECIHAYSLIHDDLPAMDDDALRRGQPTCHIKYGEDTAILAGDALQTLAFTILADQPMP 131
Query: 190 GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVV 249
GVSP + I+E+ A GV G+ G+ +D+A+EGK V L +LE IH HKT L+ AAV
Sbjct: 132 GVSPQDRIAMISELAQASGVAGMCCGQALDLAAEGKSVDLNQLEQIHRHKTGALIRAAVR 191
Query: 250 CGAVIGGGNAIE-VERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYP 308
GA+ G + + ++ YA IGL FQV DDILDV + LGKT G D A GK+TYP
Sbjct: 192 LGALTAGAAGRDALPQLDIYANAIGLAFQVQDDILDVVGDTAVLGKTQGADQALGKSTYP 251
Query: 309 KLMGIENAKSFAGELLGQAIEELAYFEASK--AAPLYFLANYIASR 352
L+G++NA++ A +L +A+ L A + L LA++I R
Sbjct: 252 ALLGLDNARAKAQDLYREALGALEVLAAQSYDTSALQALASFIIER 297
>gi|392960819|ref|ZP_10326284.1| Polyprenyl synthetase [Pelosinus fermentans DSM 17108]
gi|421054423|ref|ZP_15517391.1| Polyprenyl synthetase [Pelosinus fermentans B4]
gi|421057124|ref|ZP_15520014.1| Polyprenyl synthetase [Pelosinus fermentans B3]
gi|421067748|ref|ZP_15529192.1| Polyprenyl synthetase [Pelosinus fermentans A12]
gi|421071285|ref|ZP_15532405.1| Polyprenyl synthetase [Pelosinus fermentans A11]
gi|392440781|gb|EIW18441.1| Polyprenyl synthetase [Pelosinus fermentans B4]
gi|392447201|gb|EIW24455.1| Polyprenyl synthetase [Pelosinus fermentans A11]
gi|392448103|gb|EIW25307.1| Polyprenyl synthetase [Pelosinus fermentans A12]
gi|392454716|gb|EIW31538.1| Polyprenyl synthetase [Pelosinus fermentans DSM 17108]
gi|392463679|gb|EIW39578.1| Polyprenyl synthetase [Pelosinus fermentans B3]
Length = 292
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 124/294 (42%), Positives = 179/294 (60%), Gaps = 6/294 (2%)
Query: 64 FEEYMIRKAEQVNKALDEAV---VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
++Y K + V+ AL V + PP KI +AMRYSL AGGKR+RP+L +A+ + +GG
Sbjct: 2 LKQYCQEKGKIVDHALAAFVPSENVYPP-KIFEAMRYSLFAGGKRLRPILLMAAADSIGG 60
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
S + AC LEMIHT SLIHDDLP +D+D+ RR K SH+VFGE AILAGD LL+ A
Sbjct: 61 KGSDYLNVACGLEMIHTYSLIHDDLPAMDDDDYRRGKLTSHKVFGEGMAILAGDGLLTAA 120
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKT 240
V + GV D +++ I E+ +A G G++ G+ +D++SEG+ + + L Y+H KT
Sbjct: 121 FT-VMLAQPGVQADVLIKVIGEISNAAGALGMIGGQVIDLSSEGEKIDIDTLSYMHQAKT 179
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
L +AAV GA + GG ++ + YA+ GL FQ+ DDILDVT + E++GK G D+
Sbjct: 180 GALFQAAVRAGAQLAGGAEWQIASLTEYAKQYGLAFQITDDILDVTGTQEKIGKPVGSDV 239
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ KATY L + A+ A + + A++ L F +A L L + +R N
Sbjct: 240 KNHKATYVTLYSLGKAQDMANQAVTNALQALKQF-GQEADVLRELVRALLTRDN 292
>gi|168184569|ref|ZP_02619233.1| geranyltranstransferase [Clostridium botulinum Bf]
gi|182672379|gb|EDT84340.1| geranyltranstransferase [Clostridium botulinum Bf]
Length = 290
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 103/242 (42%), Positives = 153/242 (63%), Gaps = 1/242 (0%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLD 149
KI++AM YSL AGGKR+RP+L + + L D AMP A A+EMIHT SLIHDDLP +D
Sbjct: 28 KIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMD 87
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGV 209
ND+ RR KP +H++FGE+ AILAGDALL+ A+ ++ + + ++ ++A + A GV
Sbjct: 88 NDDLRRGKPTNHKIFGEAIAILAGDALLNEAM-NIMFEYSLKNGEKALKACYTIAKAAGV 146
Query: 210 EGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYA 269
+G++ G+ VDI SE K +SL EL Y+H KT L++A+++ GA++G ++E + Y
Sbjct: 147 DGMIGGQVVDILSEDKSISLDELHYMHKKKTGALIKASILAGAILGSATYTDIELLGEYG 206
Query: 270 RCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIE 329
+GL FQ+ DDILDV + LGK D + K T+ K+ I+ E+ + +
Sbjct: 207 DNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYSIDKCNELCTEMTNKCFD 266
Query: 330 EL 331
L
Sbjct: 267 IL 268
>gi|303228797|ref|ZP_07315611.1| putative geranyltranstransferase [Veillonella atypica
ACS-134-V-Col7a]
gi|302516509|gb|EFL58437.1| putative geranyltranstransferase [Veillonella atypica
ACS-134-V-Col7a]
Length = 292
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 109/258 (42%), Positives = 159/258 (61%), Gaps = 5/258 (1%)
Query: 82 AVVLQPPV----KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHT 137
+ VL P+ +++++M YSLL GGKR+RP+L A + + D S CALE IHT
Sbjct: 18 SAVLNSPIPEYKRLYESMNYSLLQGGKRIRPILTKAVLDAMKVDASLYKEFLCALECIHT 77
Query: 138 MSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVV 197
SLIHDDLP +DND+ RR +H+V+G+ AILAGD LL+ A + + N S ++ +
Sbjct: 78 YSLIHDDLPAMDNDDYRRGNLTNHKVYGDGMAILAGDGLLTYAFQLCSENTTA-SAEQKI 136
Query: 198 RAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGG 257
+AI + +A G EG+V G+ D+ SEGK + L+EL+ +H KT L AA+ G ++
Sbjct: 137 KAIQCLATAAGPEGMVGGQAFDLLSEGKHIPLEELKVLHSGKTGALFNAAIELGLILSNA 196
Query: 258 NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAK 317
+ + YA C+GLLFQ+ DDILDVT + EELGKT G D+ K+TY L+G++ A+
Sbjct: 197 DQAKYAAYMTYANCLGLLFQITDDILDVTGTIEELGKTPGSDIRQDKSTYVSLLGLDEAR 256
Query: 318 SFAGELLGQAIEELAYFE 335
+ A + +A LA E
Sbjct: 257 NEAHVVAQKAHAALATIE 274
>gi|333376484|ref|ZP_08468260.1| geranyltranstransferase [Kingella kingae ATCC 23330]
gi|332967867|gb|EGK06963.1| geranyltranstransferase [Kingella kingae ATCC 23330]
Length = 295
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 113/268 (42%), Positives = 168/268 (62%), Gaps = 3/268 (1%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPF 147
P +H+AMRYS L GGKR+RPLL +A+ EL ++ A A+E IH SL+HDD+P
Sbjct: 30 PQTLHEAMRYSTLDGGKRLRPLLVLAASELGNQVQAACEAAMAAVECIHVYSLVHDDMPA 89
Query: 148 LDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAM 207
+DND RR KP H FGE+TA+L GDAL +LA + ++ +S R +R + + A
Sbjct: 90 MDNDSLRRGKPTCHVQFGEATALLVGDALQTLAFDILSTETE-LSTVRQLRMVKVLAQAS 148
Query: 208 GVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAV-IGGGNAIEVERVR 266
G G+ G+ VD+ + G+D+S ELE++H KT L+ AAV G + N ++ +
Sbjct: 149 GSLGMAGGQAVDLGNVGRDLSQTELEFMHSLKTGALIRAAVALGGLSCPDLNDEQLAHLD 208
Query: 267 NYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQ 326
YA +GL FQV+DD+LD + LGKTAGKD + K TY KLMG++ A+++A +L+ Q
Sbjct: 209 VYASKLGLAFQVIDDVLDCEADTATLGKTAGKDADANKPTYVKLMGLQAARAYAEQLVAQ 268
Query: 327 AIEELAYFEASKAAPLYFLANYIASRQN 354
AI+ L F+ ++A L LA ++ +R++
Sbjct: 269 AIDALQTFD-TRADHLRTLAQFVVARKS 295
>gi|221065759|ref|ZP_03541864.1| Polyprenyl synthetase [Comamonas testosteroni KF-1]
gi|220710782|gb|EED66150.1| Polyprenyl synthetase [Comamonas testosteroni KF-1]
Length = 324
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 169/294 (57%), Gaps = 1/294 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F +M + + +AL V + P + +AMRY++L GGKR+RPLL A+ E VGG
Sbjct: 31 LDFSVWMQERLVRTEEALSRWVGINAPAGLGEAMRYAVLDGGKRLRPLLVWAAAEAVGGQ 90
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
+ + A CA+E+IH SL+HDD+P +DND RR KP H FGE++A+LAGDAL +LA
Sbjct: 91 AAATLRAGCAVELIHAYSLVHDDMPCMDNDTMRRGKPTVHVQFGEASALLAGDALQALAF 150
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
E + G+ R + +A G G+ G+ +D+AS GK +S +L +H KT
Sbjct: 151 ELLLPEDDGIPCSMQARLCRLLGAAAGSHGMAGGQAIDLASVGKQLSETQLREMHRLKTG 210
Query: 242 KLLEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
LL +V+ GA +A + + +Y + +G+ FQVVDDILDV S LGKTAGKD
Sbjct: 211 ALLLGSVLMGAACNAQTDARALAALTDYGQALGVAFQVVDDILDVVADSATLGKTAGKDA 270
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A+ K T+ L+G+E A++ A EL QA L + L LA+ + R +
Sbjct: 271 ANDKPTFVSLLGLEAARAHAEELRLQAHAALTRSGLADTQALAALADMVVQRTH 324
>gi|46447330|ref|YP_008695.1| farnesyltranstransferase [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400971|emb|CAF24420.1| probable farnesyltranstransferase [Candidatus Protochlamydia
amoebophila UWE25]
Length = 294
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 107/289 (37%), Positives = 172/289 (59%), Gaps = 4/289 (1%)
Query: 67 YMIRKAEQVNKALDEAVVLQ--PPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW 124
Y+ +++ + K LD+ V + P + +A RY+LL+GGKR+RP+L + + + + GD
Sbjct: 7 YLQTQSQLIEKRLDQLVSKRHGPHQNLIEAARYALLSGGKRLRPILALTTVQTLHGDIQE 66
Query: 125 AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV 184
A+ AC LE+IHT SLIHDDLP +DND+ RR K H + E A+L GD LL+ A E +
Sbjct: 67 ALSPACTLELIHTYSLIHDDLPCMDNDDYRRGKLTVHRQYSEGHAVLTGDFLLTYAFELL 126
Query: 185 AVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLL 244
A + ++ ++ V+ I + G +G++ G+ +D+ASEG+ ++L+ L +H +KTA L+
Sbjct: 127 ATD-KYLTSEKKVKLITILSRQSGYDGMIGGQALDLASEGQKINLETLRLLHRNKTAALI 185
Query: 245 EAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGK 304
A+V G ++ ++ +R + IGL FQ+ DDILD+T S + G+ G D+ K
Sbjct: 186 TASVEFGGILANATEEQLAHIREFGENIGLAFQITDDILDITSSEAKHGRKIGSDILKDK 245
Query: 305 ATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
+TY L+GIE AK++A +AI L + L LA++I R
Sbjct: 246 STYVSLLGIEQAKAYALNFYQKAINALKLLPYDNSF-LIHLADFIIHRH 293
>gi|49476181|ref|YP_034222.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella
henselae str. Houston-1]
gi|49238989|emb|CAF28289.1| Geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella
henselae str. Houston-1]
Length = 300
Score = 204 bits (518), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 115/267 (43%), Positives = 161/267 (60%), Gaps = 1/267 (0%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPF 147
P + KAMRY +L GGKR+RP L I SC L +++ A ALE IH SLIHDDLP
Sbjct: 35 PEILLKAMRYGVLNGGKRLRPFLVIQSCALFDIPIEYSLNVASALECIHCYSLIHDDLPA 94
Query: 148 LDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAM 207
+DND RR +P H F E+TAILAG+ALL+ A E +A + +S + +R I + A
Sbjct: 95 MDNDTLRRGQPTVHIAFDEATAILAGNALLTFAFEIIAHKTSELSFETRIRLITALAQAS 154
Query: 208 GVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRN 267
G+ G++ G+ +D+ +E K K++ + KTA L+ A GA+IG + E++
Sbjct: 155 GLGGMIGGQMLDLEAEKKPQESKDITTLQHMKTATLISFACQAGAIIGNASQELTEKLAA 214
Query: 268 YARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQA 327
+ +GL FQ+ DD+LDVT S++ LGKTAGKD + KAT+ +L GIE + EL+ QA
Sbjct: 215 FGTYLGLAFQLTDDLLDVTASTKVLGKTAGKDETAHKATFIRLYGIEETQKKRDELIAQA 274
Query: 328 IEELAYFEASKAAPLYFLANYIASRQN 354
L F A KA PL A + A+R+N
Sbjct: 275 EALLLPFGA-KATPLQQAARFSATRKN 300
>gi|358451415|ref|ZP_09161849.1| polyprenyl synthetase [Marinobacter manganoxydans MnI7-9]
gi|357224648|gb|EHJ03179.1| polyprenyl synthetase [Marinobacter manganoxydans MnI7-9]
Length = 298
Score = 204 bits (518), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 110/266 (41%), Positives = 164/266 (61%), Gaps = 3/266 (1%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLD 149
++ +AMRYS+L GGKR+RP LC+A+ + +G A+ AC++E+IH SLIHDDLP +D
Sbjct: 35 RLQEAMRYSVLGGGKRIRPALCLAAAKAMGQTGDEALIPACSVELIHAYSLIHDDLPAMD 94
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGV 209
+DE RR +P +H F E+TAILAGDAL +LA +A G+ + + E+ A G
Sbjct: 95 DDELRRGRPTTHIAFDEATAILAGDALQALAFGWLA-EAPGLPESVRLIMVRELARASGH 153
Query: 210 EGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGG-NAIEVERVRNY 268
G+V G+ +D+ S GK ++L +LE +H HKT L+E +V GA+ + + + Y
Sbjct: 154 GGMVGGQAIDLESVGKTLALAQLETMHRHKTGALIETSVRIGALTAPSVDEQALASLTQY 213
Query: 269 ARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAI 328
A+ +GL FQV DD+LD+ + +GK G D A K TYP L+G+E A+ LL QA
Sbjct: 214 AKALGLAFQVQDDLLDIEGDTTVIGKPQGSDAARAKPTYPALLGLEGAREHLANLLEQAQ 273
Query: 329 EELAYFEASKAAPLYFLANYIASRQN 354
+ L F +A PL +A+Y+ +R +
Sbjct: 274 QSLQAF-GPEADPLRAMADYVVARTH 298
>gi|375135831|ref|YP_004996481.1| geranyltranstransferase [Acinetobacter calcoaceticus PHEA-2]
gi|325123276|gb|ADY82799.1| geranyltranstransferase [Acinetobacter calcoaceticus PHEA-2]
Length = 303
Score = 204 bits (518), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 119/272 (43%), Positives = 166/272 (61%), Gaps = 6/272 (2%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG-DESWAMPAACALEMIHTMSLIHDDLP 146
P + A+ ++++ GGKRVRP LC A+ L + + A AA A+E+IH SL HDDLP
Sbjct: 33 PEPLKSAVHHAVMLGGKRVRPALCYATASLQPNPNFAAARRAAVAVELIHCYSLAHDDLP 92
Query: 147 FLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNI---AGVSPDRVVRAIAEM 203
+DND RR +P H FGE TA+LAGD L S+A E + + G D +
Sbjct: 93 CMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQMQ 152
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAV-IGGGNAIEV 262
A +V+G+ +D+ +EGK ++ ELE IH +KT L++AA++ GAV I G +
Sbjct: 153 ILATASSKMVSGQVLDLQAEGKQITQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQAI 212
Query: 263 ERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGE 322
++R Y + IGL FQV+DDILD+T S+E LGKTAGKD K+TYP LMG+E AKS+A E
Sbjct: 213 PKLRQYGQTIGLAFQVLDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAKSYAKE 272
Query: 323 LLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L QA E LA+F A L ++ ++ +R N
Sbjct: 273 LHDQAFEALAHF-GDDAKELVDISQFLLARTN 303
>gi|445494922|ref|ZP_21461966.1| farnesyl diphosphate synthase IspA [Janthinobacterium sp. HH01]
gi|444791083|gb|ELX12630.1| farnesyl diphosphate synthase IspA [Janthinobacterium sp. HH01]
Length = 296
Score = 204 bits (518), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 123/267 (46%), Positives = 162/267 (60%), Gaps = 3/267 (1%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPF 147
P K+H AMRY+LL GGKRVRPLL A+ L G D + AA A+EMIH SL+HDD+P
Sbjct: 31 PAKLHDAMRYALLGGGKRVRPLLVYAAGALFGADAAILSRAAAAVEMIHAYSLVHDDMPC 90
Query: 148 LDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAM 207
+D+DE RR KP H + E+TA+L GDAL S A V + R V + + A
Sbjct: 91 MDDDELRRGKPTVHVAYDEATALLVGDALQSQAF-LVLSEADSIPAARQVAMLRLLAHAS 149
Query: 208 GVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGG-NAIEVERVR 266
G G+ G+ +D+ S G ++L++LE +H KT LL AAVV GA+ G A E++ +
Sbjct: 150 GSAGMCGGQAIDLDSVGLSLTLEQLEQMHQLKTGALLRAAVVLGALAGKDLEAAELQALN 209
Query: 267 NYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQ 326
+YAR IGL FQVVDD+LD T S LGKTAGKD A K TY ++G+E +++ A +L
Sbjct: 210 DYARAIGLAFQVVDDVLDATADSATLGKTAGKDAADNKPTYVSILGLEPSRALAQKLRLD 269
Query: 327 AIEELAYFEASKAAPLYFLANYIASRQ 353
A LA F KA L LA+ I R+
Sbjct: 270 AHAALAPF-GEKALRLRELADLIVQRK 295
>gi|264679659|ref|YP_003279566.1| polyprenyl synthetase [Comamonas testosteroni CNB-2]
gi|262210172|gb|ACY34270.1| Polyprenyl synthetase [Comamonas testosteroni CNB-2]
Length = 324
Score = 204 bits (518), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 120/318 (37%), Positives = 177/318 (55%), Gaps = 5/318 (1%)
Query: 42 IKARHAQNSVFESTDIPL----PTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRY 97
+K + S+ PL P F +M + + AL V + P + +AMRY
Sbjct: 7 LKMQPMNESMIAEPSTPLNEGKPALDFSVWMQERLARTEDALSRWVGINAPAGLGEAMRY 66
Query: 98 SLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSK 157
++L GGKR+RPLL A+ E VGG + + A CA+E+IH SL+HDD+P +DND RR K
Sbjct: 67 AVLDGGKRLRPLLVWAAAEAVGGLAAATLRAGCAVELIHAYSLVHDDMPCMDNDTMRRGK 126
Query: 158 PASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEF 217
P H FGE++A+LAGDAL +LA E + G+ + + +A G +G+ G+
Sbjct: 127 PTVHVQFGEASALLAGDALQALAFELLLPEDDGIPCSMQAKLCRLLGAAAGSQGMAGGQA 186
Query: 218 VDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLF 276
+D+AS GK +S +L +H KT LL +V+ GA +A + + +Y + +G+ F
Sbjct: 187 IDLASVGKHLSEAQLREMHRLKTGALLLGSVLMGAACNAQTDARALAALTDYGQALGVAF 246
Query: 277 QVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEA 336
QVVDDILDV S LGKTAGKD A+ K T+ L+G+E A++ A +L QA L
Sbjct: 247 QVVDDILDVVADSATLGKTAGKDAANDKPTFVSLLGLEAARAHAEQLRQQAHAALTRSGL 306
Query: 337 SKAAPLYFLANYIASRQN 354
+ L LA+ + R +
Sbjct: 307 ADTQALGALADMVVQRTH 324
>gi|237795298|ref|YP_002862850.1| putative geranyltranstransferase [Clostridium botulinum Ba4 str.
657]
gi|229262575|gb|ACQ53608.1| putative geranyltranstransferase [Clostridium botulinum Ba4 str.
657]
Length = 290
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 103/242 (42%), Positives = 153/242 (63%), Gaps = 1/242 (0%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLD 149
KI++AM YSL AGGKR+RP+L + + L D AMP A A+EMIHT SLIHDDLP +D
Sbjct: 28 KIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMD 87
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGV 209
ND+ RR KP +H++FGE+ AILAGDALL+ A+ ++ + + ++ ++A + A GV
Sbjct: 88 NDDLRRGKPTNHKIFGEAIAILAGDALLNEAM-NIMFEYSLKNGEKALKACYTIAKAAGV 146
Query: 210 EGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYA 269
+G++ G+ VDI SE K +SL EL Y+H KT L++A+++ GA++G ++E + Y
Sbjct: 147 DGMIGGQVVDILSEDKSISLDELHYMHKKKTGALIKASILAGAILGSATYTDIELLGEYG 206
Query: 270 RCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIE 329
+GL FQ+ DDILDV + LGK D + K T+ K+ I+ E+ + +
Sbjct: 207 DNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYSIDKCNELCTEMTNKCFD 266
Query: 330 EL 331
L
Sbjct: 267 IL 268
>gi|422343993|ref|ZP_16424920.1| hypothetical protein HMPREF9432_00980 [Selenomonas noxia F0398]
gi|355377741|gb|EHG24950.1| hypothetical protein HMPREF9432_00980 [Selenomonas noxia F0398]
Length = 291
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 114/264 (43%), Positives = 169/264 (64%), Gaps = 2/264 (0%)
Query: 91 IHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDN 150
+ +AM YSL+AGGKR+RP+L +A+ + VG D + + AACALEMIHT SLIHDDLP +DN
Sbjct: 30 LREAMEYSLMAGGKRLRPILLMAAADAVGADGTKLLTAACALEMIHTYSLIHDDLPAMDN 89
Query: 151 DERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVE 210
D+ RR K +H+V+G+ AILAGDALL+LA V + V ++R + + A G E
Sbjct: 90 DDYRRGKLTNHKVYGDGIAILAGDALLTLAFT-VLLRQKDVPAASLLRVVDVISRAAGAE 148
Query: 211 GLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYAR 270
G+V G+ +D+ +E K +SL EL +H+ KT L AA+ GA++GG + ++ + YA
Sbjct: 149 GMVGGQVLDLQAENKAISLDELRRVHMGKTGALFHAALRSGAILGGASEQQLAALTAYAD 208
Query: 271 CIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEE 330
GL FQ+ DDILDV ++E++GK G D + K+TY L + A+ A + +A+
Sbjct: 209 HFGLAFQITDDILDVVGNAEDIGKPVGSDEKNHKSTYVTLTSLSAAQELAQRTVDEALAA 268
Query: 331 LAYFEASKAAPLYFLANYIASRQN 354
LA F S+A+ L L +Y+ +R+
Sbjct: 269 LAVF-GSEASFLRELVSYLVNRKQ 291
>gi|398792077|ref|ZP_10552775.1| geranylgeranyl pyrophosphate synthase [Pantoea sp. YR343]
gi|398214209|gb|EJN00792.1| geranylgeranyl pyrophosphate synthase [Pantoea sp. YR343]
Length = 299
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 126/287 (43%), Positives = 169/287 (58%), Gaps = 8/287 (2%)
Query: 73 EQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAAC 130
++VN+AL + P + AM Y L GGKR+RP L A+ E++ D + A
Sbjct: 12 QRVNQALTRLIDPLPFQSSPLVNAMEYGALLGGKRLRPFLVYATGEMLKADAASLDVPAA 71
Query: 131 ALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVN-IA 189
A+E IH SLIHDDLP +D+D RR +P H +GE TAILAGDAL +LA +A +
Sbjct: 72 AVECIHAYSLIHDDLPAMDDDALRRGQPTCHIKYGEDTAILAGDALQTLAFSILADQPMP 131
Query: 190 GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVV 249
GV+ + + I+E+ A GV G+ G+ +D+A+EGK + L +LE IH HKT L+ AAV
Sbjct: 132 GVNAEARIAMISELAQASGVAGMCGGQALDLAAEGKSIDLAQLEQIHRHKTGALIRAAVR 191
Query: 250 CGAVIGG--GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATY 307
GA+ G G A + + YA IGL FQV DDILDV + LGKT G D A GK+TY
Sbjct: 192 LGALAAGERGRA-ALPVLDTYANAIGLAFQVQDDILDVVGDTAVLGKTQGSDQALGKSTY 250
Query: 308 PKLMGIENAKSFAGELLGQAIEELAYFEAS--KAAPLYFLANYIASR 352
P LMG+ENA+S A +L +A+ L A L LA++I R
Sbjct: 251 PALMGLENARSKAWDLYQEALGALDILAAQSYNTIALQALASFIIER 297
>gi|210615786|ref|ZP_03290767.1| hypothetical protein CLONEX_02985 [Clostridium nexile DSM 1787]
gi|210150122|gb|EEA81131.1| hypothetical protein CLONEX_02985 [Clostridium nexile DSM 1787]
Length = 296
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 115/269 (42%), Positives = 167/269 (62%), Gaps = 12/269 (4%)
Query: 71 KAEQVNK--ALDEAVVLQPPVK------IHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
K E++ K A+++ + PVK I +AM YSLLAGGKR+RP+L + L GGDE
Sbjct: 4 KEERIGKITAIEQILKKYLPVKEGLQKEIMEAMEYSLLAGGKRLRPMLMRETYVLFGGDE 63
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
P A+EMIHT SL+HDDLP +DND+ RR + +H V+GE+ ILAGDALL+ A E
Sbjct: 64 ELIEPFMAAIEMIHTYSLVHDDLPAMDNDDYRRGRKTTHVVYGEAMGILAGDALLNFAFE 123
Query: 183 HVAVNIAGVSPDRVV---RAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
AV + P + + +A+ + G+ G++ G+ VD+ S G+ VS + L++I+ K
Sbjct: 124 -TAVKAFAMCPQKSIEIGQAMRILSEKAGIYGMIGGQVVDVKSAGQAVSKEVLDFIYELK 182
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T+ L+E A++ GAV+ G + EV+++ A+ +G+ FQ+ DDILDVT + E LGK D
Sbjct: 183 TSALIECAMMIGAVLAGASETEVQKIEQIAKYVGVAFQIQDDILDVTSTVEVLGKPIHSD 242
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAI 328
+ K TY L+GIENAK L +AI
Sbjct: 243 EKNEKTTYVTLLGIENAKEAVESLSMEAI 271
>gi|431925836|ref|YP_007238870.1| geranylgeranyl pyrophosphate synthase [Pseudomonas stutzeri RCH2]
gi|431824123|gb|AGA85240.1| geranylgeranyl pyrophosphate synthase [Pseudomonas stutzeri RCH2]
Length = 296
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 125/269 (46%), Positives = 172/269 (63%), Gaps = 7/269 (2%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLD 149
++++AMRYS++ GGKRVRPLL A+CE + GD++ A AACA+E+IH SL+HDDLP +D
Sbjct: 31 RLYQAMRYSVMNGGKRVRPLLVYAACEALNGDKASADGAACAVELIHAYSLVHDDLPAMD 90
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRV---VRAIAEMCSA 206
+D+ RR +P +H+ F E+ AILAGD L SLA E A+ A +P +R A + A
Sbjct: 91 DDDLRRGQPTTHKAFDEACAILAGDGLQSLAFE--AMAQAAHNPQDATLRLRMFAVLARA 148
Query: 207 MGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGG-GNAIEVERV 265
G G+V G+ +D+ S G + LE +H HKT L+EA+V GA+ G +A + +
Sbjct: 149 AGPAGMVGGQAIDLGSVGLKLDRDALELMHRHKTGALIEASVQLGALASGRADADNLASL 208
Query: 266 RNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLG 325
YAR IGL FQV DDILDV + LGK G D+A K TYP L+G++ AK++A EL
Sbjct: 209 SQYARAIGLAFQVQDDILDVESDTATLGKHQGADIARDKPTYPALLGMDAAKAYALELRD 268
Query: 326 QAIEELAYFEASKAAPLYFLANYIASRQN 354
QA+ L F+ + A PL LA YI R+N
Sbjct: 269 QALHALRPFDIA-AEPLRELARYIVERRN 296
>gi|402310269|ref|ZP_10829235.1| polyprenyl synthetase [Eubacterium sp. AS15]
gi|400368721|gb|EJP21728.1| polyprenyl synthetase [Eubacterium sp. AS15]
Length = 295
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 110/280 (39%), Positives = 164/280 (58%), Gaps = 2/280 (0%)
Query: 74 QVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALE 133
+ K +D + L KI ++M YSLL GGKR+RP+L I + +L D + AC LE
Sbjct: 17 HIKKIMD--IKLGYSQKIIESMSYSLLGGGKRLRPVLFIETLKLFDIDFEQYLDIACILE 74
Query: 134 MIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSP 193
MIHT SLIHDDLP +DND+ RR KP +H V+GE AILAGD+LL+L+ E + + S
Sbjct: 75 MIHTYSLIHDDLPAMDNDDLRRGKPTNHIVYGEDVAILAGDSLLNLSYEILFDFLYKNSS 134
Query: 194 DRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAV 253
+ A + G+ G++ G+ D+ +E K++ ++ L+YIH +KTAKL+ A+++ A
Sbjct: 135 PNNILACRLISKNAGIFGMIGGQVSDVINENKEIDIENLKYIHYNKTAKLIMASILSAAY 194
Query: 254 IGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGI 313
I + + + +YA IG+ FQ+ DDILDV E +GK+ GKD GK TYPK G+
Sbjct: 195 ISDCSKEYITYLESYAYNIGMAFQISDDILDVVGDKEIVGKSIGKDEQYGKNTYPKYFGL 254
Query: 314 ENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
E +K + A E+ ++ LA+Y+ +R
Sbjct: 255 EESKIKLKNYIDNAKREILKIDSKNIEFFVELADYVGNRN 294
>gi|333901950|ref|YP_004475823.1| Geranyltranstransferase [Pseudomonas fulva 12-X]
gi|333117215|gb|AEF23729.1| Geranyltranstransferase [Pseudomonas fulva 12-X]
Length = 295
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 130/293 (44%), Positives = 179/293 (61%), Gaps = 7/293 (2%)
Query: 67 YMIRKAEQVNKALDEAVVLQPPV---KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
Y R +QV+ AL E + P +++ AMRYS+ GGKRVRPLL A+CE +GG +
Sbjct: 5 YQARCQKQVDAAL-EPLFTAPRAELERLYAAMRYSVFNGGKRVRPLLAYAACEALGGAPA 63
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H F E+TAILAGD L SLA +
Sbjct: 64 QADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHIAFDEATAILAGDGLQSLAFDV 123
Query: 184 VAVNIAGVSPDRVVRAIAE-MCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAK 242
+A + ++ + + A G G+V G+ +D+ S G+ + LE +H HKT
Sbjct: 124 LANTRHNPHSAEIRLSMFQALAQAAGPAGMVGGQAIDLGSVGQQLQQPALEVMHRHKTGA 183
Query: 243 LLEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
L+EAAV GA+ G + + + YAR +GL FQV DDILDV + LGKT GKD A
Sbjct: 184 LIEAAVRLGALASGRADEQALTALSTYARAVGLAFQVQDDILDVESDTATLGKTQGKDQA 243
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K TYP L+G+ AK++A EL QA++ L F+ A PL LA YI R+N
Sbjct: 244 NDKPTYPALLGMAAAKAYALELRDQALQALQPFD-DAAEPLRELARYIVERRN 295
>gi|418293779|ref|ZP_12905681.1| geranyltranstransferase [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
gi|379065164|gb|EHY77907.1| geranyltranstransferase [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
Length = 295
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 129/295 (43%), Positives = 182/295 (61%), Gaps = 9/295 (3%)
Query: 66 EYMIRKAEQVNKALDEAVVLQPPV----KIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
+Y ++V+ L+ V PP+ ++++AMRYS++ GGKRVRPLL A+CE + GD
Sbjct: 4 DYQKSCQQRVDGCLEALFV--PPLPQLERLYQAMRYSVMNGGKRVRPLLVYAACEALNGD 61
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
++ A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 62 KASADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 182 EHVAVNIAGVSPDRV-VRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKT 240
E +A + +R A + A G G+V G+ +D+ S G + LE +H HKT
Sbjct: 122 EAMAQERHNPQDAALRLRMFAVLARAAGPAGMVGGQAIDLGSVGLKLDRDALELMHRHKT 181
Query: 241 AKLLEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
L+EA+V GA+ G +A + + YAR IGL FQV DDILDV + LGK G D
Sbjct: 182 GALIEASVQLGALASGHADADNLASLSQYARTIGLAFQVQDDILDVESDTATLGKHQGAD 241
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+A K TYP L+G++ AK++A EL QA+ L F+ + A PL LA YI R+N
Sbjct: 242 IARDKPTYPALLGMDAAKAYALELRDQALHALRPFD-TAAEPLRELARYIVERRN 295
>gi|455740411|ref|YP_007506677.1| Octaprenyl-diphosphate synthase [Morganella morganii subsp.
morganii KT]
gi|455421974|gb|AGG32304.1| Octaprenyl-diphosphate synthase [Morganella morganii subsp.
morganii KT]
Length = 305
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 124/299 (41%), Positives = 175/299 (58%), Gaps = 10/299 (3%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVG-G 120
F + + E+V+ LDE + P + KAM Y L GGKR+RP L A+ E+ G
Sbjct: 9 FRNQLTQARERVDHVLDEILTTLPFAATDMGKAMHYGALLGGKRLRPFLVYATGEMFGVT 68
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
E+ PAA A+E IH SLIHDDLP +D+D RR KP H FGE+ AILAGDAL + A
Sbjct: 69 AENLDAPAA-AIECIHAYSLIHDDLPAMDDDTLRRGKPTCHVAFGEANAILAGDALQTQA 127
Query: 181 LEHVAVN-IAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
+A + V P + IAE+ A G+ G+ G+ +D+A+EGK++ + LE IH HK
Sbjct: 128 FAILAARPMPDVRPQDRLAMIAELADAAGLGGMCGGQALDLAAEGKNIGIHALEQIHNHK 187
Query: 240 TAKLLEAAVVCGAVIGG--GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
T L+ A+V GA+ G G A+ + + YA+ IGL FQV DDILDV ++ +GK+ G
Sbjct: 188 TGALIRASVRMGAMSAGEAGYAV-LPALDTYAQAIGLAFQVQDDILDVIGHTDVIGKSQG 246
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEAS--KAAPLYFLANYIASRQN 354
D A GK+TYP L+G++ A+ A L +++ L+ E A L LAN++ R +
Sbjct: 247 SDAAHGKSTYPSLLGLKAAQDKAQALYQESLAALSQLEEHHYNTATLRELANFVIERNS 305
>gi|422659619|ref|ZP_16722043.1| geranyltranstransferase [Pseudomonas syringae pv. lachrymans str.
M302278]
gi|331018236|gb|EGH98292.1| geranyltranstransferase [Pseudomonas syringae pv. lachrymans str.
M302278]
Length = 295
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 125/294 (42%), Positives = 184/294 (62%), Gaps = 9/294 (3%)
Query: 67 YMIRKAEQVNKALDEAVVLQPPV----KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
Y + +VN AL+ + Q P ++++AMRYS++ GGKRVRPLL A+CE +GG
Sbjct: 5 YQAQSQTRVNAALEG--LFQAPSPELSRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 63 EDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFT 122
Query: 183 H-VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
+A +++ ++ ++ + +A G G+V G+ +D+ S G + LEY+H HKT
Sbjct: 123 ALLAPHLSSRDAATRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTG 182
Query: 242 KLLEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
L+EA+V GA+ G + ++ ++ YAR +GL FQV DDILDV + LGK G D+
Sbjct: 183 ALIEASVRLGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESDTATLGKRQGADI 242
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A K TYP L+G++ AK +A EL QA+ L+ F+ + A PL LA YI R++
Sbjct: 243 ARDKPTYPALLGLDAAKGYALELRDQALAALSLFD-TTAEPLRELARYIVERRH 295
>gi|71731469|gb|EAO33531.1| Polyprenyl synthetase [Xylella fastidiosa Ann-1]
Length = 291
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 118/291 (40%), Positives = 170/291 (58%), Gaps = 5/291 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
F + R + + L ++ Q P ++H AMRY++L+GGKR+RPLL A+ L DE
Sbjct: 6 FTRWCQRTDSYLERTL--SIPTQAPQRLHAAMRYTVLSGGKRIRPLLVYAAGHLFHVDEP 63
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
A A+E+IH SL+HDDLP +D+D RR +P H F E+TAIL GDAL +LA E
Sbjct: 64 LLDVPAAAVELIHAYSLVHDDLPAMDDDLLRRGRPTVHIAFDEATAILTGDALQTLAFEC 123
Query: 184 VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
+A A S + + + A GV G+ G+ +DI + G+ +LK LE +H K+ L
Sbjct: 124 LADAPADTS--LRIAWLQTLTHAAGVAGMCGGQALDIDATGQSQTLKALEVMHALKSGTL 181
Query: 244 LEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASG 303
+ AAV GA+ G +A ++ + +A +GL FQV DDILD+ SSE+LGKTAGKD
Sbjct: 182 MRAAVRMGALAGDPSAEDLHSLDTFAATLGLAFQVRDDILDIESSSEQLGKTAGKDAIQQ 241
Query: 304 KATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K+T+P L+ +E AK + EL + +L + +AAPL LA R +
Sbjct: 242 KSTFPALLSVEGAKCYLQELAERLYTQLHPY-GERAAPLTALARLAVERAH 291
>gi|392553125|ref|ZP_10300262.1| geranyltranstransferase [Pseudoalteromonas spongiae UST010723-006]
Length = 296
Score = 203 bits (517), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 112/266 (42%), Positives = 160/266 (60%), Gaps = 2/266 (0%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLD 149
K+ A RYSLL GGKR+RP+L + EL D + ACA+E IH+ SL+HDDLP +D
Sbjct: 32 KLVAACRYSLLNGGKRLRPILVYLTGELFNADNADLDRIACAIECIHSYSLVHDDLPAMD 91
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVA-VNIAGVSPDRVVRAIAEMCSAMG 208
+DE RR +P H + E+TAIL GDAL LA E + + + ++ + + +A G
Sbjct: 92 DDELRRGRPTCHIAYDEATAILVGDALQCLAFETITESQFNCTTVNNQLKIVNTLANASG 151
Query: 209 VEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNY 268
+ G+ G+ +DIA+ ++L +LE +H KT LL++A+ GA+ G N +E+ + Y
Sbjct: 152 LLGMCGGQALDIAATDSVITLTQLEQVHKLKTGALLKSAIKMGALAGNANELEIAALARY 211
Query: 269 ARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAI 328
A IGL FQV DDILDV + LGK G D+ + KATYP L+GIE AK A L+ QAI
Sbjct: 212 AEAIGLAFQVQDDILDVEGDTHTLGKPQGSDIEANKATYPALLGIEGAKEKAQNLVNQAI 271
Query: 329 EELAYFEASKAAPLYFLANYIASRQN 354
+ L+ +A L +A YI +R +
Sbjct: 272 DALSEIDAD-TGRLKAIAEYIIARDH 296
>gi|319761830|ref|YP_004125767.1| polyprenyl synthetase [Alicycliphilus denitrificans BC]
gi|317116391|gb|ADU98879.1| Polyprenyl synthetase [Alicycliphilus denitrificans BC]
Length = 297
Score = 203 bits (517), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 117/261 (44%), Positives = 159/261 (60%), Gaps = 1/261 (0%)
Query: 57 IPLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCE 116
+P + F +M + QV L V P + AMRY++L GGKR+RPLL +A+CE
Sbjct: 1 MPTSDYDFARWMRGQLAQVEAGLSLWVRADAPAGLGAAMRYAVLDGGKRLRPLLVLAACE 60
Query: 117 LVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDAL 176
VGG A+ AACA+E+IH SL+HDD+P +DND RR KP H FG++ A+LAGDAL
Sbjct: 61 AVGGLGQAALRAACAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVRFGQAQALLAGDAL 120
Query: 177 LSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIH 236
+LA E + GV P R + A G +G+ G+ +D+AS G+ ++ +L ++H
Sbjct: 121 QALAFELLTPE-DGVPPAMQARLCRLLAQAAGADGMAGGQAIDLASVGQQLTQDQLRHMH 179
Query: 237 VHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTA 296
KT LL A+VV GA G + + + Y IGL FQVVDD+LDVT+ S LGKTA
Sbjct: 180 RLKTGALLRASVVMGAACGEPAGVAEQALAQYGAAIGLAFQVVDDVLDVTQDSATLGKTA 239
Query: 297 GKDLASGKATYPKLMGIENAK 317
GKD AS K TY LMG++ A+
Sbjct: 240 GKDAASDKPTYVSLMGLDAAR 260
>gi|160934292|ref|ZP_02081679.1| hypothetical protein CLOLEP_03163 [Clostridium leptum DSM 753]
gi|156866965|gb|EDO60337.1| polyprenyl synthetase [Clostridium leptum DSM 753]
Length = 293
Score = 203 bits (517), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 120/293 (40%), Positives = 162/293 (55%), Gaps = 12/293 (4%)
Query: 66 EYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWA 125
+Y+ R E + L LQ V +AM YSLLAGGKR+RP L + C + GGD A
Sbjct: 6 QYLSRIEEALASYLPAKDCLQKDVI--EAMEYSLLAGGKRIRPTLTLEFCRVCGGDVQAA 63
Query: 126 MPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV- 184
MP ACA+EMIH+ SLIHDDLP +DN + RR +PA+H +GE A+LAGD LL+LA E
Sbjct: 64 MPFACAVEMIHSYSLIHDDLPCMDNSDLRRGRPANHIQYGEDIALLAGDGLLTLAFETAL 123
Query: 185 ---AVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
++ +AG R A + A G EG+V G+ +D+ E + ++ L + KT
Sbjct: 124 SPESIKLAGAQ--RGAEAARLLAKAAGAEGMVGGQVIDLQHENQRAPIEVLLEMDRKKTG 181
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
L++AA G + G + + E YA C+GL FQ+ DDILDV E LGK G D
Sbjct: 182 ALIQAAAQMGCAVAGADQKQREAAVEYAACVGLAFQIRDDILDVISDPETLGKPVGSDDK 241
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K+TY L+G+E A+ EL QA L+ F A FL + S N
Sbjct: 242 NEKSTYVSLLGMEKAQQLVNELTQQAESALSAFSEDTA----FLREFAQSLAN 290
>gi|410087035|ref|ZP_11283740.1| Octaprenyl-diphosphate synthase [Morganella morganii SC01]
gi|421492881|ref|ZP_15940240.1| ISPA [Morganella morganii subsp. morganii KT]
gi|400192986|gb|EJO26123.1| ISPA [Morganella morganii subsp. morganii KT]
gi|409766264|gb|EKN50358.1| Octaprenyl-diphosphate synthase [Morganella morganii SC01]
Length = 307
Score = 203 bits (517), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 124/299 (41%), Positives = 175/299 (58%), Gaps = 10/299 (3%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVG-G 120
F + + E+V+ LDE + P + KAM Y L GGKR+RP L A+ E+ G
Sbjct: 11 FRNQLTQARERVDHVLDEILTTLPFAATDMGKAMHYGALLGGKRLRPFLVYATGEMFGVT 70
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
E+ PAA A+E IH SLIHDDLP +D+D RR KP H FGE+ AILAGDAL + A
Sbjct: 71 AENLDAPAA-AIECIHAYSLIHDDLPAMDDDTLRRGKPTCHVAFGEANAILAGDALQTQA 129
Query: 181 LEHVAVN-IAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
+A + V P + IAE+ A G+ G+ G+ +D+A+EGK++ + LE IH HK
Sbjct: 130 FAILAARPMPDVRPQDRLAMIAELADAAGLGGMCGGQALDLAAEGKNIGIHALEQIHNHK 189
Query: 240 TAKLLEAAVVCGAVIGG--GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
T L+ A+V GA+ G G A+ + + YA+ IGL FQV DDILDV ++ +GK+ G
Sbjct: 190 TGALIRASVRMGAMSAGEAGYAV-LPALDTYAQAIGLAFQVQDDILDVIGHTDVIGKSQG 248
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEAS--KAAPLYFLANYIASRQN 354
D A GK+TYP L+G++ A+ A L +++ L+ E A L LAN++ R +
Sbjct: 249 SDAAHGKSTYPSLLGLKAAQDKAQALYQESLAALSQLEEHHYNTATLRELANFVIERNS 307
>gi|404368532|ref|ZP_10973882.1| hypothetical protein FUAG_00177 [Fusobacterium ulcerans ATCC 49185]
gi|313687827|gb|EFS24662.1| hypothetical protein FUAG_00177 [Fusobacterium ulcerans ATCC 49185]
Length = 295
Score = 203 bits (517), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 110/292 (37%), Positives = 173/292 (59%), Gaps = 2/292 (0%)
Query: 64 FEEYMIRKAEQVNKALDEAVV-LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
F+ Y+ + + ++D + L P I + M+Y++L GGKR+RP+L +++G ++
Sbjct: 3 FKNYLDSNKKLIESSMDTYLSELNYPEVIAEGMKYAVLNGGKRLRPILLFMILDILGCEK 62
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
+ +A A+EMIH+ SL+HDDLP LDND+ RR K +H+ FGE+ IL GDALL+ A
Sbjct: 63 ENGIASAAAIEMIHSYSLVHDDLPALDNDDYRRGKLTTHKKFGEAEGILIGDALLTHAFY 122
Query: 183 HVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAK 242
+ + ++V+ + S G+ G++ G+ +DIASEGK + L+ L+YIH +KT K
Sbjct: 123 ILTDKNKHLPAEKVIEIVRLTSSYAGINGMIGGQMIDIASEGKKIDLETLKYIHSNKTGK 182
Query: 243 LLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
L++ V +IG + E E + +A IGL FQ+ DDILD+ LGK G D+
Sbjct: 183 LMKLPVELACIIGDADKEEKEILVKFADLIGLAFQIKDDILDIEGDFSTLGKPVGSDIEL 242
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELA-YFEASKAAPLYFLANYIASRQ 353
GK+TYP L+G+ +K+ E + +A +A F K+ L LA+YI +R
Sbjct: 243 GKSTYPALIGMAESKALLKETIAEAKTIVAEKFGVEKSNILLELADYIGNRN 294
>gi|430748056|ref|YP_007207185.1| geranylgeranyl pyrophosphate synthase [Singulisphaera acidiphila
DSM 18658]
gi|430019776|gb|AGA31490.1| geranylgeranyl pyrophosphate synthase [Singulisphaera acidiphila
DSM 18658]
Length = 340
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 130/311 (41%), Positives = 187/311 (60%), Gaps = 22/311 (7%)
Query: 42 IKARH---AQNSVFESTDIPLPTFPFEEYMIRKAEQVNKAL-------DEAVVLQPPVKI 91
+ RH A+N + T + + P ++ QV++AL ++A L PP ++
Sbjct: 21 VPPRHRLAARNHLPMMTSRSIESSPPASFIEEARRQVDEALRRYLPASEDAGALCPP-RL 79
Query: 92 HKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDND 151
+AMRYS+L GGKR+RP+LC+ + E G D S A+PAACALE++HT SLIHDDLP +D+D
Sbjct: 80 SEAMRYSVLGGGKRLRPILCLLAAEACGADPSAALPAACALELVHTYSLIHDDLPAMDDD 139
Query: 152 ERRRSKPASHEVFGESTAILAGDALLSLALE----HVAVNIAGVSPDRVVRAIAEMCSAM 207
+ RR +P H+ F E+TA+LAGD LL+LA E HV A V+ V+A+AE
Sbjct: 140 DLRRGRPTCHKAFDEATAVLAGDGLLTLAFEILAQHVRPAEAAVA---CVQALAE---GA 193
Query: 208 GVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVR 266
G G+V G+ D+ +EG+ D SL+ LE IH KT LL A++ G ++ G + + +
Sbjct: 194 GPSGMVGGQMADLEAEGRNDPSLEALESIHRRKTGALLRASLRMGGLVAGADETSLHALN 253
Query: 267 NYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQ 326
Y +GL FQ++DD+LDV +LGK GKD GK TYP L+GIE ++ A +L +
Sbjct: 254 IYGGAVGLAFQIIDDLLDVQGDETKLGKRVGKDSGLGKWTYPGLLGIEGSRQRAKQLADE 313
Query: 327 AIEELAYFEAS 337
A+ LA AS
Sbjct: 314 AVAALAPLGAS 324
>gi|206562765|ref|YP_002233528.1| putative geranyltranstransferase [Burkholderia cenocepacia J2315]
gi|444361872|ref|ZP_21162450.1| polyprenyl synthetase [Burkholderia cenocepacia BC7]
gi|444372694|ref|ZP_21172127.1| polyprenyl synthetase [Burkholderia cenocepacia K56-2Valvano]
gi|198038805|emb|CAR54767.1| putative geranyltranstransferase [Burkholderia cenocepacia J2315]
gi|443592942|gb|ELT61706.1| polyprenyl synthetase [Burkholderia cenocepacia K56-2Valvano]
gi|443597987|gb|ELT66387.1| polyprenyl synthetase [Burkholderia cenocepacia BC7]
Length = 294
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 129/295 (43%), Positives = 178/295 (60%), Gaps = 7/295 (2%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
FE++M ++V AL + + P K+H+AMRY++L GGKRVRPLLC A+ EL G
Sbjct: 1 MTFEQWMRSVLDRVEDALGHYLPAETAMPAKLHEAMRYAVLGGGKRVRPLLCHAAGELTG 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
E+ AA ALEMIH SL+HDD+P +D+D RR KP H + E TA+L GDAL S
Sbjct: 61 ATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQ 120
Query: 180 ALEHVAVNIA-GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
A VA+ A +SP + + E+ A G G+ G+ +D+AS G ++ ++LE +H
Sbjct: 121 AF--VALTDADALSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMHRM 178
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRN-YARCIGLLFQVVDDILDVTKSSEELGKTAG 297
KT LL AAV GA+ G + E + YA +GL FQVVDDILDVT S LGKTAG
Sbjct: 179 KTGALLRAAVRMGALAGETPSTETMAALDVYAGAVGLAFQVVDDILDVTTDSATLGKTAG 238
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
KD A+ K TY ++G+E ++ A +L +A + L F A +A L LA+ + +R
Sbjct: 239 KDAANDKPTYVSILGLEASRELAAQLRAEAHDALKPFGA-RAQRLAELADLVVNR 292
>gi|443468774|ref|ZP_21058981.1| Octaprenyl-PP synthase [Pseudomonas pseudoalcaligenes KF707]
gi|442897993|gb|ELS24810.1| Octaprenyl-PP synthase [Pseudomonas pseudoalcaligenes KF707]
Length = 295
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 132/295 (44%), Positives = 182/295 (61%), Gaps = 11/295 (3%)
Query: 67 YMIRKAEQVNKALDEAVVLQPPV----KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
Y R ++V+ AL A + +PP+ ++++AMRYS++ GGKRVRPLL A+CE +GGD
Sbjct: 5 YQARCQQRVDAAL--AALFEPPLAPLERLYQAMRYSVVNGGKRVRPLLVYAACEALGGDP 62
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
+ A AACA+E+IH SL+HDDLP +D+D+ RR +P +H F E+ AILAGD L +LA E
Sbjct: 63 ARADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHIAFDEACAILAGDGLQALAFE 122
Query: 183 HVAVNIAGVSPDRVVR--AIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKT 240
V + D R +A + A G G+V G+ +D+ S G + LE +H HKT
Sbjct: 123 -VLADAERNPQDAETRLAMVASLGHAAGPAGMVGGQAIDLGSVGLKLDQAALETMHRHKT 181
Query: 241 AKLLEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
L+EA+V GA+ G + +R YAR +GL FQV DDILDV + LGKT GKD
Sbjct: 182 GALIEASVRLGALASGQATPAALAALRIYARAVGLAFQVQDDILDVESDTATLGKTQGKD 241
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A K TYP L+G++ AK++A EL QA+ +A S A PL LA YI R++
Sbjct: 242 QAHDKPTYPALLGMDRAKAYALELRDQALAAVAGLGDS-AEPLRALARYIVERRS 295
>gi|229163124|ref|ZP_04291080.1| Geranyltranstransferase [Bacillus cereus R309803]
gi|228620530|gb|EEK77400.1| Geranyltranstransferase [Bacillus cereus R309803]
Length = 296
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/271 (42%), Positives = 175/271 (64%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
LQ P + +AM YSL AGGKR+RPLL A+ + G + + + AACALEMIHT SL+HDD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV-AVNIAGVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ A + + A +S ++ VR + E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
A G EG+V G+ D+ +EG+ +++ ELEYIH HKT KLLE AV+ GA++ + +
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGELLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEK 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
+ +A+ IGL FQ+ DDILDV + EE+GK G D+++ K+TY L ++ AK +
Sbjct: 207 NLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILEDT 266
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A + ++ + + L + + IA R N
Sbjct: 267 IAKAKDAISSLQL-QDEYLVSICDLIAKRNN 296
>gi|402836862|ref|ZP_10885393.1| polyprenyl synthetase [Mogibacterium sp. CM50]
gi|402269878|gb|EJU19147.1| polyprenyl synthetase [Mogibacterium sp. CM50]
Length = 297
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 107/248 (43%), Positives = 158/248 (63%), Gaps = 5/248 (2%)
Query: 94 AMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDER 153
+M+YS+++GGKR+RP++ +A+CE GGD A+P ACALE IHT SLIHDDLP +DND+
Sbjct: 32 SMKYSVMSGGKRLRPVMLLAACEFSGGDIYEALPFACALEYIHTYSLIHDDLPAMDNDDL 91
Query: 154 RRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPD-----RVVRAIAEMCSAMG 208
RR P +H+VFGE A+L GDALL+ A+E + ++ D R A + A G
Sbjct: 92 RRGNPTNHKVFGEDIAVLGGDALLNTAMEVMFRDLTYFFDDSEKLKRHSCAGLTIAKAAG 151
Query: 209 VEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNY 268
V G++AG+ VD+ + D S + +++I +KT L+ A V+ G IGG + ++ Y
Sbjct: 152 VTGMIAGQVVDVENGMDDCSQEFVDFIEENKTGALIAAPVIAGLGIGGADKEMIDAFTVY 211
Query: 269 ARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAI 328
+RCIG FQ+ DDILD+T S +ELGKT GKD +A + + GI++A++ L AI
Sbjct: 212 SRCIGKAFQISDDILDMTGSVDELGKTPGKDSHHERANFALVNGIDSARAELHTLTMSAI 271
Query: 329 EELAYFEA 336
E + +E+
Sbjct: 272 ESIEKYES 279
>gi|421838068|ref|ZP_16272058.1| geranyltranstransferase, partial [Clostridium botulinum
CFSAN001627]
gi|409739634|gb|EKN40262.1| geranyltranstransferase, partial [Clostridium botulinum
CFSAN001627]
Length = 262
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/241 (42%), Positives = 152/241 (63%), Gaps = 1/241 (0%)
Query: 91 IHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDN 150
I++AM YSL AGGKR+RP+L + + L D AMP A A+EMIHT SLIHDDLP +DN
Sbjct: 1 IYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDN 60
Query: 151 DERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVE 210
D+ RR KP +H++FGE+ AILAGDALL+ A+ ++ + + ++ V+A + A GV+
Sbjct: 61 DDLRRGKPTNHKIFGEAIAILAGDALLNEAM-NIMFEYSLKNGEKAVKACYTIAKAAGVD 119
Query: 211 GLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYAR 270
G++ G+ VDI SE K + L EL Y+H +T L++A+++ GA++G ++E + Y
Sbjct: 120 GMIGGQVVDILSEDKSIPLDELYYMHKKRTGALIKASILAGAILGSATYTDIELLGEYGD 179
Query: 271 CIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEE 330
+GL FQ+ DDILDV + LGK D + K T+ K+ GIE E+ + +
Sbjct: 180 NLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIEKCNELCTEMTNKCFDI 239
Query: 331 L 331
L
Sbjct: 240 L 240
>gi|422646392|ref|ZP_16709525.1| geranyltranstransferase [Pseudomonas syringae pv. maculicola str.
ES4326]
gi|330959939|gb|EGH60199.1| geranyltranstransferase [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 295
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 127/294 (43%), Positives = 183/294 (62%), Gaps = 9/294 (3%)
Query: 67 YMIRKAEQVNKALDEAVVLQPP----VKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
Y + +VN AL+ + Q P ++++AMRYS++ GGKRVRPLL A+CE +GG
Sbjct: 5 YQAQSQTRVNAALEG--LFQAPSPELTRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 63 EDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFT 122
Query: 183 H-VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
+A +++ + ++ ++ + +A G G+V G+ +D+ S G + LEY+H HKT
Sbjct: 123 ALLAPHLSSRDAETRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTG 182
Query: 242 KLLEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
L+EA+V GA+ G + + ++ YAR IGL FQV DDILDV + LGK G D+
Sbjct: 183 ALIEASVRLGALASGHADQPRLAALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADI 242
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A K TYP L+G++ AK +A EL QA+ LA F +A PL LA YI R++
Sbjct: 243 ARDKPTYPALIGLQAAKGYALELRDQALGALADF-GPQAEPLRELARYIVERRH 295
>gi|81428294|ref|YP_395294.1| farnesyl-diphosphate synthase [Lactobacillus sakei subsp. sakei
23K]
gi|78609936|emb|CAI54983.1| Farnesyl-diphosphate synthase [Lactobacillus sakei subsp. sakei
23K]
Length = 290
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/258 (44%), Positives = 163/258 (63%), Gaps = 9/258 (3%)
Query: 64 FEEYMIRKAEQVNKALD-EAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG-- 120
F++ R+ Q + L E +Q P + K+M YS++AGGKR+RPLL A E G
Sbjct: 4 FKQLAARELPQFDAYLKRELAKIQEPT-LQKSMTYSVMAGGKRLRPLLLFAVLESTGQSI 62
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
DE+ A AA ALE+IH+ SLIHDDLP +DND+ RR +P +H+VFGE+ AILAGD LL+LA
Sbjct: 63 DET-AFRAAGALELIHSYSLIHDDLPAMDNDDLRRGQPTNHKVFGEAEAILAGDGLLTLA 121
Query: 181 LEHVA-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
E +A +N+ +VR +A+ A G G+VAG+ DI E K ++L +L+ +H K
Sbjct: 122 FEWLATLNVTAEQRIELVRLLAQ---AAGANGMVAGQIEDIEGEHKTLTLAQLQQVHHLK 178
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T L+E AV GAV+ +E +R +A+ GL FQ+ DDILDVT ++ E+GK KD
Sbjct: 179 TGCLIEVAVAMGAVLAQLGEVETTALRGFAQQFGLAFQIQDDILDVTSTTAEMGKAVHKD 238
Query: 300 LASGKATYPKLMGIENAK 317
A K T+P L+G+ A+
Sbjct: 239 AAEQKNTFPILLGMSGAQ 256
>gi|506378|gb|AAA96328.1| geranylgeranyl pyrophosphate synthase, partial [Arabidopsis
thaliana]
Length = 157
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/159 (63%), Positives = 126/159 (79%), Gaps = 5/159 (3%)
Query: 131 ALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAG 190
A+EM+HTMSLI DDLP +DND+ RR KP +H+VFGES AIL+G ALL+LA EH+ A
Sbjct: 1 AVEMMHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLTE--AD 58
Query: 191 VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG---KDVSLKELEYIHVHKTAKLLEAA 247
VS ++VRA+ E+ ++G +GLVAG+ D++SEG DV L++LEYIHVHKT LLEA+
Sbjct: 59 VSSKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLEDLEYIHVHKTGSLLEAS 118
Query: 248 VVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVT 286
V GAVIGGG E+E+VRN+ARCIGLLFQVVDDILDVT
Sbjct: 119 AVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILDVT 157
>gi|373496649|ref|ZP_09587195.1| hypothetical protein HMPREF0402_01068 [Fusobacterium sp. 12_1B]
gi|371965538|gb|EHO83038.1| hypothetical protein HMPREF0402_01068 [Fusobacterium sp. 12_1B]
Length = 295
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 110/292 (37%), Positives = 173/292 (59%), Gaps = 2/292 (0%)
Query: 64 FEEYMIRKAEQVNKALDEAVV-LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
F+ Y+ + + ++D + L P I + M+Y++L GGKR+RP+L +++G ++
Sbjct: 3 FKNYLDSNKKLIESSMDTYLSELNYPEVIAEGMKYAVLNGGKRLRPILLFMILDILGCEK 62
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
+ +A A+EMIH+ SL+HDDLP LDND+ RR K +H+ FGE+ IL GDALL+ A
Sbjct: 63 ENGIASAAAIEMIHSYSLVHDDLPALDNDDYRRGKLTTHKKFGEAEGILIGDALLTHAFY 122
Query: 183 HVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAK 242
+ + ++V+ + S G+ G++ G+ +DIASEGK + L+ L+YIH +KT K
Sbjct: 123 ILTDKNKHLPAEKVIEIVRLTSSYAGINGMIGGQMIDIASEGKKIDLETLKYIHSNKTGK 182
Query: 243 LLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
L++ V +IG + E E + +A IGL FQ+ DDILD+ LGK G D+
Sbjct: 183 LMKLPVELACIIGDADKEEKEILVKFADLIGLAFQIKDDILDIEGDFSTLGKPVGSDIEL 242
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELA-YFEASKAAPLYFLANYIASRQ 353
GK+TYP L+G+ +K+ E + +A +A F K+ L LA+YI +R
Sbjct: 243 GKSTYPALIGMVESKALLKETIAEAKTIVAEKFGVEKSNILLELADYIGNRN 294
>gi|419797597|ref|ZP_14323066.1| polyprenyl synthetase [Neisseria sicca VK64]
gi|385697679|gb|EIG28090.1| polyprenyl synthetase [Neisseria sicca VK64]
Length = 298
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/270 (41%), Positives = 167/270 (61%), Gaps = 3/270 (1%)
Query: 86 QPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDL 145
Q P +H+AMRY L GGKR+RPLL +A+ EL D++ A A+EM+H SL+HDD+
Sbjct: 31 QVPHTLHEAMRYVTLGGGKRLRPLLVLAASELGDADQNAVEQAMAAIEMVHVYSLVHDDM 90
Query: 146 PFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCS 205
P +DND RR KP H + E+TA+L GDAL + A + V G+ +R + ++ +
Sbjct: 91 PAMDNDSLRRGKPTCHVKYDEATALLVGDALQTQAFD-VLSRPTGLPAERQIAMLSTLAK 149
Query: 206 AMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGG-NAIEVER 264
A G G+ G+ +D+A+ GK ++ +LE +H KT L+ AAVV GA+ ++ +V
Sbjct: 150 ASGSLGMAGGQAIDLANVGKAMNQAQLEQMHSLKTGALIRAAVVLGALACPDLDSDDVLT 209
Query: 265 VRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELL 324
+ NYA +GL FQV+DD+LD + LGKTAGKD + K TY KLMG++ A+++A L
Sbjct: 210 LDNYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDNDNDKPTYVKLMGLQAARAYAETLT 269
Query: 325 GQAIEELAYFEASKAAPLYFLANYIASRQN 354
+A+ L F A KA L LA ++ +R+N
Sbjct: 270 AEAVALLEPFGA-KALHLRLLAEFVTARKN 298
>gi|51892982|ref|YP_075673.1| geranylgeranyl pyrophosphate synthase [Symbiobacterium thermophilum
IAM 14863]
gi|51856671|dbj|BAD40829.1| geranylgeranyl pyrophosphate synthase [Symbiobacterium thermophilum
IAM 14863]
Length = 297
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 128/274 (46%), Positives = 172/274 (62%), Gaps = 3/274 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAVV-LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
F++YM + +QV ALD L P ++ +AMRYSLLAGGKR+RP+L IA+ EL G +
Sbjct: 5 FQQYMAARRQQVEAALDRYTAGLDAPSRLVEAMRYSLLAGGKRLRPILTIAASELFGLEA 64
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
+ MP ACALEMIHT SLIHDDLP +D+D+ RR +P H+V+GE+ A+LAGDALL+ A
Sbjct: 65 ADVMPGACALEMIHTYSLIHDDLPCMDDDDLRRGRPTCHKVYGEAMAVLAGDALLTQAFA 124
Query: 183 HVAVNIA--GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKT 240
+A A V P R VRA AE+ A G EG+V G+ D+A EG+ +L IH KT
Sbjct: 125 LMAEQAAVPRVGPARAVRAAAELAHAAGAEGMVGGQVEDLAWEGRQADEPQLRRIHSLKT 184
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
L AAV G ++ G +++R+ YA GL FQ+ DD+LDVT + GK G+D
Sbjct: 185 GALFRAAVRMGGILAGAGEEDLDRLGRYATHFGLAFQIWDDVLDVTGDAALTGKGVGRDA 244
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYF 334
K+TY L G+E A+ A + + A+EEL F
Sbjct: 245 RLDKSTYVTLHGVEGARERAYQAVRLALEELEPF 278
>gi|403238230|ref|ZP_10916816.1| polyprenyl synthetase [Bacillus sp. 10403023]
Length = 297
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/295 (41%), Positives = 182/295 (61%), Gaps = 9/295 (3%)
Query: 65 EEYMIRKAEQVNKALDEAVV-LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
E+++ + ++ + L + + L P I +M YSL AGGKR+RPLL + + G DE+
Sbjct: 7 EQFLSFQKNKIEEQLPKYISKLSAPKIIKDSMDYSLEAGGKRIRPLLLLGTLHSFGKDEN 66
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
+ ACA+EMIHT SLIHDDLP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ + +
Sbjct: 67 IGLSTACAIEMIHTYSLIHDDLPSMDDDDLRRGKPTNHKVFGEAIAVLAGDGLLTYSFQL 126
Query: 184 VAVNIAG-VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAK 242
V+ ++ +SP++ + I E+ A G EG+V G+ D+ EG ++L ELEYIH HKT K
Sbjct: 127 VSESVGNTISPEKKLLLITELAKAAGPEGMVGGQVADMEGEGAVLNLDELEYIHRHKTGK 186
Query: 243 LLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
LL +V+ GA++ + +++++ +A +GL FQ+ DDILD+ + LGK G D +
Sbjct: 187 LLAYSVIAGAILADATSEQLDKLTQFAHHLGLAFQIRDDILDIEGTELVLGKPVGSDTGN 246
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEAS---KAAPLYFLANYIASRQN 354
K TYP L+ +E AK E L I+E F S K L ++ N IASR +
Sbjct: 247 HKNTYPALLTLEGAK----EKLTFHIDEAKRFLYSVNMKHDILDYMCNLIASRDH 297
>gi|311069029|ref|YP_003973952.1| geranyltranstransferase [Bacillus atrophaeus 1942]
gi|419820327|ref|ZP_14343938.1| geranyltranstransferase [Bacillus atrophaeus C89]
gi|310869546|gb|ADP33021.1| geranyltranstransferase [Bacillus atrophaeus 1942]
gi|388475479|gb|EIM12191.1| geranyltranstransferase [Bacillus atrophaeus C89]
Length = 296
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/293 (40%), Positives = 184/293 (62%), Gaps = 3/293 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAV-VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
FE+++ + + + L L P + K+M YSL AGGKR+RP++ +A G E
Sbjct: 5 FEQFLAERKNVIEQQLSVYTERLNMPDSLKKSMLYSLEAGGKRLRPVVVLAILHAYGKSE 64
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
+P CA+EMIHT SLIHDDLP +D+D+ RR KP +H+VFGE+TA+LAGD LL+ + +
Sbjct: 65 KDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFK 124
Query: 183 HVAVNIA-GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
+ +++ VS D+ +R + E+ SA G EG+V G+ D+ +E K VSL+ELE IH KTA
Sbjct: 125 LITSHVSEDVSADKRLRLVNELISAAGTEGMVGGQIADMEAESKSVSLEELESIHERKTA 184
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
KLL +V+ GA++ E+E +R ++ IG+ FQ+ DDILD+ + E++GK G D
Sbjct: 185 KLLAFSVMAGAILADAPENEIETLRAFSSHIGIGFQIRDDILDLEGNEEKIGKRVGSDTT 244
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K+TYP L+ ++ AK+ + + A + ++ K LY L + IA+R +
Sbjct: 245 NDKSTYPSLLSLDGAKNKLADHMKAAKDLISGLSLQKEL-LYDLCDLIAARDH 296
>gi|170691118|ref|ZP_02882284.1| Polyprenyl synthetase [Burkholderia graminis C4D1M]
gi|170144367|gb|EDT12529.1| Polyprenyl synthetase [Burkholderia graminis C4D1M]
Length = 293
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/294 (42%), Positives = 175/294 (59%), Gaps = 6/294 (2%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
FE++ E+V AL+ + + P K+H+AMRY++L GGKRVRPLLC A+ EL G
Sbjct: 1 MTFEQWTRSVLERVEAALEHYLPAETTEPAKLHEAMRYAVLGGGKRVRPLLCHAAGELTG 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
AA ALEMIH SL+HDD+P +D+D RR KP H + E+TA+L GDAL S
Sbjct: 61 ARAECLDAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQ 120
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A + ++ ++P + + E+ A G G+ G+ +D+AS G ++ +LE +H K
Sbjct: 121 AFVSLTSDV--LAPAQQAALVRELALASGSIGMCGGQAIDLASVGHTLTRAQLETMHRMK 178
Query: 240 TAKLLEAAVVCGAVIGGG-NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
T LL AAV GA+ G +A + + Y+ +GL FQVVDDILDVT S LGKTAGK
Sbjct: 179 TGALLRAAVRMGALAGEAPDANAMRSLDAYSAAVGLAFQVVDDILDVTTDSATLGKTAGK 238
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
D GK TY ++G++ ++S A +L A LA F A +A L LA+ + +R
Sbjct: 239 DAKDGKPTYVSIIGLDASRSLAAQLRSDAHAALAPFGA-RAQRLAELADLVVNR 291
>gi|421074462|ref|ZP_15535494.1| Polyprenyl synthetase [Pelosinus fermentans JBW45]
gi|392527503|gb|EIW50597.1| Polyprenyl synthetase [Pelosinus fermentans JBW45]
Length = 292
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/294 (42%), Positives = 179/294 (60%), Gaps = 6/294 (2%)
Query: 64 FEEYMIRKAEQVNKALDEAV---VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
++Y K + V+ AL V + PP KI +AMRYSL AGGKR+RP+L +A+ + +GG
Sbjct: 2 LKQYCQEKGKIVDHALAAFVPSENVYPP-KIFEAMRYSLFAGGKRLRPILLMAAADSIGG 60
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
S + AC LEMIHT SLIHDDLP +D+D+ RR K SH+VFGE AILAGD LL+ A
Sbjct: 61 KGSDYLNVACGLEMIHTYSLIHDDLPAMDDDDYRRGKLTSHKVFGEGMAILAGDGLLTAA 120
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKT 240
V + GV D +++ + E+ +A G G++ G+ +D++SEG+ + + L Y+H KT
Sbjct: 121 FT-VMLAQPGVQADVLIKVVGEISNAAGALGMIGGQVIDLSSEGEKIDIDTLSYMHQAKT 179
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
L +AAV GA + GG +V + YA+ GL FQ+ DDILDVT + E++GK G D+
Sbjct: 180 GALFKAAVRAGAQLAGGEEWQVASLTEYAKQYGLAFQITDDILDVTGTQEKIGKPVGSDV 239
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ KATY L + A+ A + + A++ L F +A L L + +R N
Sbjct: 240 KNHKATYVTLYSLGEAQDMADQAVTNALQALKQF-GQEADILRELVRALLTRDN 292
>gi|330826310|ref|YP_004389613.1| polyprenyl synthetase [Alicycliphilus denitrificans K601]
gi|329311682|gb|AEB86097.1| Polyprenyl synthetase [Alicycliphilus denitrificans K601]
Length = 297
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/261 (44%), Positives = 159/261 (60%), Gaps = 1/261 (0%)
Query: 57 IPLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCE 116
+P + F +M + QV L V P + AMRY++L GGKR+RPLL +A+CE
Sbjct: 1 MPTSDYDFARWMRGQLAQVEAGLSLWVRADAPAGLGAAMRYAVLDGGKRLRPLLVLAACE 60
Query: 117 LVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDAL 176
VGG A+ AACA+E+IH SL+HDD+P +DND RR KP H FG++ A+LAGDAL
Sbjct: 61 AVGGLGQAALRAACAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVRFGQAQALLAGDAL 120
Query: 177 LSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIH 236
+LA E + GV P R + A G +G+ G+ +D+AS G+ ++ +L ++H
Sbjct: 121 QALAFELLTPE-DGVPPAMQARLCRLLAQAAGADGMAGGQAIDLASVGQQLTQDQLRHMH 179
Query: 237 VHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTA 296
KT LL A+VV GA G + + + Y IGL FQVVDD+LDVT+ S LGKTA
Sbjct: 180 RLKTGALLRASVVMGAACGEPARVAEQALAQYGAAIGLAFQVVDDVLDVTQDSATLGKTA 239
Query: 297 GKDLASGKATYPKLMGIENAK 317
GKD AS K TY LMG++ A+
Sbjct: 240 GKDAASDKPTYVSLMGLDAAR 260
>gi|340785925|ref|YP_004751390.1| geranyltranstransferase [Collimonas fungivorans Ter331]
gi|340551192|gb|AEK60567.1| Geranyltranstransferase [Collimonas fungivorans Ter331]
Length = 299
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 174/301 (57%), Gaps = 12/301 (3%)
Query: 62 FPFEEYMIRKAEQVNKALDEAV--VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
F+ +M + + ALD + P ++H+AMRY++L GGKRVRPLL A+ EL
Sbjct: 1 MAFDAWMRQTQTGMEAALDRFLPAATSIPARLHQAMRYAVLDGGKRVRPLLVFAAGELFA 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
+ A AA A+EMIH SL+HDD+P +D+D RR KP H + E+TA+L GDAL S
Sbjct: 61 TPLTVAQRAAAAVEMIHAYSLVHDDMPCMDDDALRRGKPTVHVQYDEATALLVGDALQSQ 120
Query: 180 A---LEHVAVNI-AGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYI 235
A L I A + R + + + A G G+ G+ +D+AS G ++SL ELE +
Sbjct: 121 AFVVLAEAGAEIGAEIDSARQIVMLRLLAQASGSLGMCGGQAIDLASVGLNLSLAELEQM 180
Query: 236 HVHKTAKLLEAAVVCGAVIGGGNAI---EVERVRNYARCIGLLFQVVDDILDVTKSSEEL 292
H KT LL A+V+ GA GG A+ E+E + Y IGL FQVVDDILD T S L
Sbjct: 181 HKLKTGALLRASVLLGAW--GGKALAPAEIEALEAYGTAIGLAFQVVDDILDATADSATL 238
Query: 293 GKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
GKTAGKD A K TY ++G+ +++ A +L A + LA F +KA L LA+ I R
Sbjct: 239 GKTAGKDAADNKPTYVSILGLPESQALAEKLRNDAHQALAIF-GNKARRLRELADLIVQR 297
Query: 353 Q 353
+
Sbjct: 298 K 298
>gi|254248780|ref|ZP_04942100.1| Geranylgeranyl pyrophosphate synthase [Burkholderia cenocepacia
PC184]
gi|124875281|gb|EAY65271.1| Geranylgeranyl pyrophosphate synthase [Burkholderia cenocepacia
PC184]
Length = 294
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 129/295 (43%), Positives = 178/295 (60%), Gaps = 7/295 (2%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
FE++M ++V AL + + P K+H+AMRY++L GGKRVRPLLC A+ EL G
Sbjct: 1 MTFEQWMRSVLDRVEDALGHYLPAETAMPAKLHEAMRYAVLGGGKRVRPLLCHAAGELTG 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
E+ AA ALEMIH SL+HDD+P +D+D RR KP H + E TA+L GDAL S
Sbjct: 61 ATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQ 120
Query: 180 ALEHVAVNIA-GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
A VA+ A +SP + + E+ A G G+ G+ +D+AS G ++ ++LE +H
Sbjct: 121 AF--VALTDADALSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMHRM 178
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRN-YARCIGLLFQVVDDILDVTKSSEELGKTAG 297
KT LL AAV GA+ G + E + YA +GL FQVVDDILDVT S LGKTAG
Sbjct: 179 KTGALLRAAVRMGALAGETPSAETMAALDVYAGAVGLAFQVVDDILDVTTDSATLGKTAG 238
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
KD A+ K TY ++G+E ++ A +L +A + L F A +A L LA+ + +R
Sbjct: 239 KDAANDKPTYVSILGLEASRELAAQLRAEAHDALKPFGA-RAQRLAELADLVVNR 292
>gi|107026831|ref|YP_624342.1| polyprenyl synthetase [Burkholderia cenocepacia AU 1054]
gi|116691975|ref|YP_837508.1| polyprenyl synthetase [Burkholderia cenocepacia HI2424]
gi|170736031|ref|YP_001777291.1| polyprenyl synthetase [Burkholderia cenocepacia MC0-3]
gi|105896205|gb|ABF79369.1| farnesyl-diphosphate synthase [Burkholderia cenocepacia AU 1054]
gi|116649975|gb|ABK10615.1| farnesyl-diphosphate synthase [Burkholderia cenocepacia HI2424]
gi|169818219|gb|ACA92801.1| Polyprenyl synthetase [Burkholderia cenocepacia MC0-3]
Length = 294
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 129/295 (43%), Positives = 178/295 (60%), Gaps = 7/295 (2%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
FE++M ++V AL + + P K+H+AMRY++L GGKRVRPLLC A+ EL G
Sbjct: 1 MTFEQWMRSVLDRVEDALGHYLPAETAMPAKLHEAMRYAVLGGGKRVRPLLCHAAGELTG 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
E+ AA ALEMIH SL+HDD+P +D+D RR KP H + E TA+L GDAL S
Sbjct: 61 ATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQ 120
Query: 180 ALEHVAVNIA-GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
A VA+ A +SP + + E+ A G G+ G+ +D+AS G ++ ++LE +H
Sbjct: 121 AF--VALTDAEALSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMHRM 178
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRN-YARCIGLLFQVVDDILDVTKSSEELGKTAG 297
KT LL AAV GA+ G + E + YA +GL FQVVDDILDVT S LGKTAG
Sbjct: 179 KTGALLRAAVRMGALAGETPSAETMAALDVYAGAVGLAFQVVDDILDVTTDSATLGKTAG 238
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
KD A+ K TY ++G+E ++ A +L +A + L F A +A L LA+ + +R
Sbjct: 239 KDAANDKPTYVSILGLEASRELAAQLRAEAHDALKPFGA-RAQRLAELADLVVNR 292
>gi|170757695|ref|YP_001781434.1| geranyltranstransferase [Clostridium botulinum B1 str. Okra]
gi|169122907|gb|ACA46743.1| putative geranyltranstransferase [Clostridium botulinum B1 str.
Okra]
Length = 290
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/242 (42%), Positives = 153/242 (63%), Gaps = 1/242 (0%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLD 149
KI++AM YSL AGGKR+RP+L + + L D AMP A A+EMIHT SLIHDDLP +D
Sbjct: 28 KIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMD 87
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGV 209
ND+ RR KP +H++FGE+ AILAGDALL+ A+ ++ + + ++ ++A + A V
Sbjct: 88 NDDLRRGKPTNHKIFGEAIAILAGDALLNEAM-NIMFEYSLKNGEKALKACYTIAKAAEV 146
Query: 210 EGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYA 269
+G++ G+ VDI SE K ++L EL Y+H KT L++A+++ GA++G ++E + Y
Sbjct: 147 DGMIGGQVVDILSEDKSITLDELYYMHKKKTGALIKASILAGAILGSATYTDIELLGEYG 206
Query: 270 RCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIE 329
+GL FQ+ DDILDV + LGK D + K T+ K+ GIE E+ + +
Sbjct: 207 DNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIEKCNELCTEMTNKCFD 266
Query: 330 EL 331
L
Sbjct: 267 IL 268
>gi|145298029|ref|YP_001140870.1| geranyltranstransferase [Aeromonas salmonicida subsp. salmonicida
A449]
gi|418361767|ref|ZP_12962414.1| geranyltranstransferase [Aeromonas salmonicida subsp. salmonicida
01-B526]
gi|142850801|gb|ABO89122.1| geranyltranstransferase [Aeromonas salmonicida subsp. salmonicida
A449]
gi|356686883|gb|EHI51473.1| geranyltranstransferase [Aeromonas salmonicida subsp. salmonicida
01-B526]
Length = 296
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 117/270 (43%), Positives = 160/270 (59%), Gaps = 9/270 (3%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLD 149
++ AMRY LL GGKRVRP L A E++G A A+E IH SL+HDDLP +D
Sbjct: 31 RLRDAMRYGLLLGGKRVRPFLVYAVGEMLGVKRELLDGPAAAVECIHAYSLLHDDLPAMD 90
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRV----VRAIAEMCS 205
ND+ RR +P H+ F E TAILAGDAL +LA +A + PDR+ VR ++ +
Sbjct: 91 NDDLRRGQPTVHKAFDEGTAILAGDALQTLAFSILADHPL---PDRLLANRVRMLSTLAR 147
Query: 206 AMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGG-NAIEVER 264
A G G+ G+ +D+ +EG+ +SL ELE +H HKT L+E AV GA+ + +
Sbjct: 148 ASGYLGMCGGQALDLQAEGRQISLPELEQVHRHKTGALIECAVALGALCKADVDDTTLAA 207
Query: 265 VRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELL 324
++ YA IGL FQV DDILD+T + LGK G DLA K+TYP L+G++NA+ A EL
Sbjct: 208 LQTYAAAIGLAFQVQDDILDITGDTVTLGKPQGSDLAQEKSTYPALLGLDNARELARELH 267
Query: 325 GQAIEELAYFEASKAAPLYFLANYIASRQN 354
G+A+ L + L A+YI R +
Sbjct: 268 GKALTALQSLPYNTDI-LEAFADYIIERTH 296
>gi|78063059|ref|YP_372967.1| farnesyl-diphosphate synthase [Burkholderia sp. 383]
gi|77970944|gb|ABB12323.1| farnesyl-diphosphate synthase [Burkholderia sp. 383]
Length = 294
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/294 (43%), Positives = 177/294 (60%), Gaps = 5/294 (1%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
FE++M ++V AL + + P K+H+AMRY++L GGKRVRPLLC A+ EL G
Sbjct: 1 MTFEQWMRSVLDRVEDALGHYLPAETAVPEKLHEAMRYAVLGGGKRVRPLLCHAAGELTG 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
E+ AA ALEMIH SL+HDD+P +D+D RR KP H + E TA+L GDAL S
Sbjct: 61 ATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQ 120
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A + + A +SP + + E+ A G G+ G+ +D+AS G ++ ++LE +H K
Sbjct: 121 AFVAL-TDAAALSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMHRMK 179
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRN-YARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
T LL AAV GA+ G + E + YA +GL FQVVDDILDVT S LGKTAGK
Sbjct: 180 TGALLRAAVRMGALAGETPSAETMAALDVYAGAVGLAFQVVDDILDVTTDSATLGKTAGK 239
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
D A+ K TY ++G+E ++ A +L +A + L F A +A L LA+ + +R
Sbjct: 240 DAANDKPTYVSILGLEASRELAAQLRTEAHDALKPFGA-RAQRLAELADLVVNR 292
>gi|424836170|ref|ZP_18260827.1| geranyltranstransferase [Clostridium sporogenes PA 3679]
gi|365977572|gb|EHN13671.1| geranyltranstransferase [Clostridium sporogenes PA 3679]
Length = 290
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 156/248 (62%), Gaps = 1/248 (0%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLD 149
+I+++M YSL AGGKR+RP+L + + L D A+P A A+EMIHT SLIHDDLP +D
Sbjct: 28 EIYESMAYSLEAGGKRIRPILFLNTYSLYKEDYKQAIPIAAAIEMIHTYSLIHDDLPAMD 87
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGV 209
ND+ RR KP +H++FGE+ AILAGDALL+ A+ ++ + + + + ++A + A GV
Sbjct: 88 NDDLRRGKPTNHKIFGEAIAILAGDALLNEAM-NIMFDYSLKNGENALKACYTIAKAAGV 146
Query: 210 EGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYA 269
+G++ G+ VDI SE K +SL EL Y+H KT L++A+++ GA++G + ++E + Y
Sbjct: 147 DGMIGGQVVDILSEDKSISLDELYYMHKKKTGALIKASILAGAILGSATSTDIELLGEYG 206
Query: 270 RCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIE 329
+GL FQ+ DDILDV LGK D + K T+ K+ G+E E+ + +
Sbjct: 207 DNLGLAFQIKDDILDVEGDITTLGKKTKSDEDNHKTTFVKVYGVEKCNELCTEMTNKCFD 266
Query: 330 ELAYFEAS 337
L E +
Sbjct: 267 ILNKIEKN 274
>gi|334127647|ref|ZP_08501552.1| geranyltranstransferase [Centipeda periodontii DSM 2778]
gi|333388960|gb|EGK60127.1| geranyltranstransferase [Centipeda periodontii DSM 2778]
Length = 291
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/293 (40%), Positives = 176/293 (60%), Gaps = 4/293 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPV--KIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
+E ++ V +AL E + P + + +M YSL+AGGKR+RP+L +A+ + VG D
Sbjct: 1 MKELWKKRQALVERALTEEMAKTPVLDDTLRASMEYSLMAGGKRLRPVLLMAAADAVGAD 60
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
+ +P ACALEMIHT SLIHDDLP +DND RR KP +H F E AILAGDALL+LA
Sbjct: 61 GTKFLPVACALEMIHTYSLIHDDLPAMDNDNLRRGKPTNHVKFSEGIAILAGDALLTLAF 120
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
V + V + ++R + E+ A G EG+V G+ +D+A+E ++++EL +H+ KT
Sbjct: 121 T-VILRQKDVPAEALLRVVDEISRAAGAEGMVGGQVLDLAAENCQITMEELRRVHMGKTG 179
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
L AA+ GA++ G + ++ + YA GL FQ+ DDILDV S+EELGK G D
Sbjct: 180 ALFHAALRSGAILAGASEEQLAVLTAYADHFGLAFQITDDILDVIGSAEELGKPVGSDEK 239
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K+TY L + A+ A + +A+ L F ++A L L Y+ +R+
Sbjct: 240 NHKSTYVSLTSLAEAQELARNTVEEAVAALDGF-GTEADFLRALVTYLVNRKQ 291
>gi|325578412|ref|ZP_08148547.1| geranyltranstransferase [Haemophilus parainfluenzae ATCC 33392]
gi|325160148|gb|EGC72277.1| geranyltranstransferase [Haemophilus parainfluenzae ATCC 33392]
Length = 297
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 117/266 (43%), Positives = 161/266 (60%), Gaps = 4/266 (1%)
Query: 91 IHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDN 150
+ AM+Y LL GGKRVRP L A+ +++G + S AA A+E IH SLIHDDLP +DN
Sbjct: 34 LRDAMKYGLLLGGKRVRPFLVYATGKMLGAEMSALDYAAAAIESIHAYSLIHDDLPAMDN 93
Query: 151 DERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVE 210
DE RR +P H F E+TAILAGDAL + A E + +S ++ ++ + + A GV+
Sbjct: 94 DELRRGQPTCHIAFDEATAILAGDALQAFAFE-ILTEAPSLSAEQKLQLVKVLAQASGVQ 152
Query: 211 GLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGG--NAIEVERVRNY 268
G+ G+ +D+ SE K V+L ELE IH +KT LL AA+ G + N +++ Y
Sbjct: 153 GMCLGQSLDLISEHKQVNLDELELIHRNKTGALLTAALKLGFICSPHFENKELEQQLERY 212
Query: 269 ARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAI 328
++ IGL FQV DDILD+ S E+GK G DL K+TYPKL+G+E AK A EL A+
Sbjct: 213 SQTIGLAFQVQDDILDIEGDSAEIGKPVGSDLGLDKSTYPKLLGLEGAKQKAQELYQTAL 272
Query: 329 EELAYFEASKAAPLYFLANYIASRQN 354
EL A L LA +I +R++
Sbjct: 273 HELDNLPFDTTA-LRALAEFIVNRKS 297
>gi|119775569|ref|YP_928309.1| geranyltranstransferase [Shewanella amazonensis SB2B]
gi|119768069|gb|ABM00640.1| farnesyl-diphosphate synthase [Shewanella amazonensis SB2B]
Length = 293
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 116/268 (43%), Positives = 160/268 (59%), Gaps = 1/268 (0%)
Query: 86 QPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDL 145
Q + AMR+ L GGKR+RP L A EL+G D++ A A+E +H SLIHDDL
Sbjct: 26 QTAPALKAAMRHGALIGGKRIRPFLVYAVGELLGVDKAKLDRLAAAVECVHAYSLIHDDL 85
Query: 146 PFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCS 205
P +D+D RR KP H F E+TAILAGDAL +LA E ++ + AG++P V IA +
Sbjct: 86 PAMDDDNLRRGKPTVHIAFDEATAILAGDALQTLAFEIISESDAGLAPKAQVAMIAALAR 145
Query: 206 AMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERV 265
A G G+ G+ +D+A EGK +SL EL +H KT L+ AAV + + + +
Sbjct: 146 ASGYLGMCGGQALDLAGEGKSISLDELTRLHNLKTGALIRAAVELALIAADASDADTAAL 205
Query: 266 RNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLG 325
R YA IGL FQV DDILD+T ++EE+GK G DL + K+TYPKL+G++ A+ A L+
Sbjct: 206 RAYADAIGLAFQVQDDILDITATTEEIGKPQGSDLDANKSTYPKLLGLDGARQTADALVA 265
Query: 326 QAIEELAYFEASKAAPLYFLANYIASRQ 353
A+ LA + F A YI +R+
Sbjct: 266 DALSALAKMPYNSQLLADF-ARYIVARR 292
>gi|398969622|ref|ZP_10682972.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM30]
gi|398141759|gb|EJM30670.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM30]
Length = 295
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/294 (42%), Positives = 182/294 (61%), Gaps = 9/294 (3%)
Query: 67 YMIRKAEQVNKALDEAVVLQPPV----KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
Y +VN AL+ ++ + P+ ++++AM YS++ GGKRVRPLL A+CE +GG
Sbjct: 5 YSATSQARVNAALE--ILFKAPLPELSRLYEAMHYSVMIGGKRVRPLLAYAACEALGGKA 62
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 63 EQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAFS 122
Query: 183 HVA-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
+ ++ + D ++ + + A G G+V G+ +D+ S G + + LE +H HKT
Sbjct: 123 ALLDPRLSNLDADIRLQQVTALAHAAGPAGMVGGQAIDLGSVGLKLDQQALEQMHRHKTG 182
Query: 242 KLLEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
L+E +V GA+ G E++ ++ YA+ IGL FQV DDILDV +E LGK G D+
Sbjct: 183 ALIEVSVKLGALASGRAEQDELKALQTYAQAIGLAFQVQDDILDVESDTETLGKRQGADI 242
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A K TYP L+G++ AK +A EL QA+ L F+A+ A PL LA YI R+N
Sbjct: 243 ARDKPTYPALLGLDAAKVYALELRDQALHALRPFDAA-AEPLRDLARYIVERRN 295
>gi|170699439|ref|ZP_02890483.1| Polyprenyl synthetase [Burkholderia ambifaria IOP40-10]
gi|170135639|gb|EDT03923.1| Polyprenyl synthetase [Burkholderia ambifaria IOP40-10]
Length = 294
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/297 (42%), Positives = 178/297 (59%), Gaps = 11/297 (3%)
Query: 62 FPFEEYMIRKAEQVNKALD-----EAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCE 116
FE++M ++V AL E VV P ++H+AMRY++L GGKRVRPLLC A+ E
Sbjct: 1 MTFEQWMRSVLDRVEDALGHYLPAENVV---PTQLHEAMRYAVLGGGKRVRPLLCHAAGE 57
Query: 117 LVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDAL 176
L G E+ AA ALEMIH SL+HDD+P +D+D RR KP H + E TA+L GDAL
Sbjct: 58 LTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDAL 117
Query: 177 LSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIH 236
S A + ++ +SP + + E+ A G G+ G+ +D+AS G ++ ++LE +H
Sbjct: 118 QSQAFVAL-TDVDALSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMH 176
Query: 237 VHKTAKLLEAAVVCGAVIGGGNAIEVERVRN-YARCIGLLFQVVDDILDVTKSSEELGKT 295
KT LL AAV GA+ G + E + YA +GL FQVVDDILDVT S LGKT
Sbjct: 177 RMKTGALLRAAVRMGALAGDTPSAETLAALDVYAAAVGLAFQVVDDILDVTTDSATLGKT 236
Query: 296 AGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
AGKD A+ K TY ++G++ ++ A +L +A + L F A +A L LA+ + +R
Sbjct: 237 AGKDAANDKPTYVSILGLDASRELAAQLRAEAHDALKPFGA-RAQRLAELADLVVNR 292
>gi|418531677|ref|ZP_13097588.1| polyprenyl synthetase [Comamonas testosteroni ATCC 11996]
gi|371451179|gb|EHN64220.1| polyprenyl synthetase [Comamonas testosteroni ATCC 11996]
Length = 309
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/296 (38%), Positives = 168/296 (56%), Gaps = 1/296 (0%)
Query: 60 PTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
P F +M + + AL V + P + +AMRY++L GGKR+RPLL A+ E VG
Sbjct: 14 PALDFSVWMQERLARTEDALSRWVGINAPAGLGEAMRYAVLDGGKRLRPLLVWAAAEAVG 73
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
G + + A CA+E+IH SL+HDD+P +DND RR KP H FGE++A+LAGDAL +L
Sbjct: 74 GLAAATLRAGCAVELIHAYSLVHDDMPCMDNDTMRRGKPTVHVQFGEASALLAGDALQAL 133
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A E + G+ + + +A G +G+ G+ +D+AS GK +S +L +H K
Sbjct: 134 AFELLLPEDDGIPCSMQAKLCRLLGAAAGSQGMAGGQAIDLASVGKQLSEAQLREMHRLK 193
Query: 240 TAKLLEAAVVCGAVIGGGNAIE-VERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
T LL +V+ GA + + + Y + +G+ FQVVDDILDV S LGKTAGK
Sbjct: 194 TGALLLGSVLMGAACNAQTDVRALAALTVYGQALGVAFQVVDDILDVVADSATLGKTAGK 253
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
D A+ K T+ L+G+E A++ A +L QA L + L LA+ + R +
Sbjct: 254 DAANDKPTFVSLLGLEAARAHAEQLRQQAHAALTRSGLADTQALGALADMVVQRTH 309
>gi|317047156|ref|YP_004114804.1| polyprenyl synthetase [Pantoea sp. At-9b]
gi|316948773|gb|ADU68248.1| Polyprenyl synthetase [Pantoea sp. At-9b]
Length = 299
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 126/288 (43%), Positives = 169/288 (58%), Gaps = 10/288 (3%)
Query: 73 EQVNKALDEAVVLQP-PVK---IHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPA 128
E+VN AL +L P P + + AM+Y L GGKR+RP L A+ E++ D +
Sbjct: 12 ERVNLALTR--LLDPLPFQSSPLVNAMQYGALLGGKRLRPFLVYATGEMLKADPASLDAP 69
Query: 129 ACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVN- 187
A A+E IH SLIHDDLP +D+D RR +P H +GE TAILAGDAL +LA +A
Sbjct: 70 AAAVECIHAYSLIHDDLPAMDDDALRRGQPTCHIKYGEDTAILAGDALQTLAFSILADQP 129
Query: 188 IAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAA 247
+ GVS + + I+E+ A GV G+ G+ +D+A+EG+ + L +LE IH HKT L+ AA
Sbjct: 130 MPGVSAEARITMISELAQASGVAGMCGGQALDLAAEGQSIDLAQLEQIHRHKTGALIRAA 189
Query: 248 VVCGAVIGGGNAIEVERVRN-YARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKAT 306
V GA+ G V + YA IGL FQV DDILDV + LGKT G D A GK+T
Sbjct: 190 VRLGALAAGEQGRAALPVLDVYANAIGLAFQVQDDILDVVGDTAILGKTQGADQALGKST 249
Query: 307 YPKLMGIENAKSFAGELLGQAIEELAYFEAS--KAAPLYFLANYIASR 352
YP LMG++NA+ A +L +A+ L A L LA++I R
Sbjct: 250 YPALMGLDNARQKAWDLYQEALGALDILAAQSFNTTALQALASFIIER 297
>gi|441504643|ref|ZP_20986636.1| Octaprenyl-diphosphate synthase [Photobacterium sp. AK15]
gi|441427742|gb|ELR65211.1| Octaprenyl-diphosphate synthase [Photobacterium sp. AK15]
Length = 303
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/287 (42%), Positives = 165/287 (57%), Gaps = 5/287 (1%)
Query: 72 AEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAA 129
AE+ N+ L E + QP + KAM++ L GGKR RP L A+ E++G A
Sbjct: 18 AERNNQRLAEWLAAQPFADQPLIKAMKHGTLLGGKRARPFLTYATGEMLGASSEELDTPA 77
Query: 130 CALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIA 189
A+E IH SLIHDDLP +D+D RR +P H F E+TAILAGD+L +LA E +A
Sbjct: 78 AAVECIHAYSLIHDDLPAMDDDNLRRGQPTCHIAFDEATAILAGDSLQTLAFEILASGPL 137
Query: 190 GVSPDRV-VRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAV 248
++ V+ IAE+ A G G+ G+ +D+ +EGK VSL++LE IH HKT L+ A+
Sbjct: 138 SEHGEKYRVKMIAELAQASGSAGMCMGQALDLEAEGKQVSLEQLENIHKHKTGALIRCAI 197
Query: 249 VCGAVIGGGNAIEV-ERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATY 307
GA+ G + V ++ YA IGL FQV DDILDVT +E LGK G DL K+TY
Sbjct: 198 RLGALAVGDKGVTVLPQLNQYADAIGLAFQVQDDILDVTSDTETLGKPQGSDLELEKSTY 257
Query: 308 PKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
P L+G+E A+ A +L +A++ L L A Y+ R N
Sbjct: 258 PALLGLEGARVKAQQLYKEALQALDAI-PYNTDQLEVFARYVIERNN 303
>gi|395788008|ref|ZP_10467584.1| hypothetical protein ME7_00919 [Bartonella birtlesii LL-WM9]
gi|395409790|gb|EJF76375.1| hypothetical protein ME7_00919 [Bartonella birtlesii LL-WM9]
Length = 300
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/298 (39%), Positives = 168/298 (56%), Gaps = 8/298 (2%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQP-------PVKIHKAMRYSLLAGGKRVRPLLCIASCE 116
F + + + V L+ + QP P + KAMRY +L GGKR+RP L + S
Sbjct: 4 FTTLLAKHGQSVENRLNTLLSSQPQNGEISRPEMLIKAMRYGVLNGGKRLRPFLVLQSSA 63
Query: 117 LVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDAL 176
L + ACALE +H SLIHDDLP +DND RR KP H+ F E+TAILAG+AL
Sbjct: 64 LFDIPAENVLDVACALECVHCYSLIHDDLPAMDNDILRRGKPTLHKAFDEATAILAGNAL 123
Query: 177 LSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIH 236
L+ A E +A +S D ++ I + A G+ G++ G+ +DI +E K K++ +
Sbjct: 124 LTFAFETIAHKACTLSFDTKIKLITALAQASGLGGMIGGQMLDIEAEKKLQKSKDIITLQ 183
Query: 237 VHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTA 296
KTA L+ A GA+I + E++ + +GL FQ+ DD+LD T SSE LGKTA
Sbjct: 184 RMKTAALISFACQAGALIANASKELTEKLATFGTYLGLAFQLTDDLLDFTTSSEVLGKTA 243
Query: 297 GKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
GKD ++ KAT+ +L GIE + E + +A L F A KA PL A++ A+R+N
Sbjct: 244 GKDESAQKATFVRLYGIEETQKKRDEFIAKAETLLLPFGA-KAKPLLHAAHFSATRKN 300
>gi|384462224|ref|YP_005674819.1| geranyltranstransferase [Clostridium botulinum F str. 230613]
gi|295319241|gb|ADF99618.1| geranyltranstransferase [Clostridium botulinum F str. 230613]
Length = 290
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/242 (42%), Positives = 152/242 (62%), Gaps = 1/242 (0%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLD 149
KI++AM YSL AGGKR+RP+L + + L D AMP A A+EMIHT SLIHDDLP +D
Sbjct: 28 KIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMD 87
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGV 209
ND+ RR KP +H++FGE+ AILAGDALL+ A+ ++ + + ++ ++A + A GV
Sbjct: 88 NDDLRRGKPTNHKIFGEAIAILAGDALLNEAM-NIMFEYSLKNGEKALKACYTIAKAAGV 146
Query: 210 EGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYA 269
+G++ G+ VDI SE K +SL EL Y+ K L++A+++ GA++G ++E + Y
Sbjct: 147 DGMIGGQVVDILSEDKSISLDELYYMQQKKAGALIKASILAGAILGSATYTDIELLGEYG 206
Query: 270 RCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIE 329
+GL FQ+ DDILDV + LGK D + K T+ K+ GIE E+ + +
Sbjct: 207 DNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIEKCNELCTEMTNKCFD 266
Query: 330 EL 331
L
Sbjct: 267 IL 268
>gi|339495741|ref|YP_004716034.1| geranyltranstransferase [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
gi|338803113|gb|AEJ06945.1| geranyltranstransferase [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
Length = 296
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/274 (45%), Positives = 173/274 (63%), Gaps = 7/274 (2%)
Query: 87 PPV----KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIH 142
PP+ ++++AMRYS++ GGKRVRPLL A+CE + GD++ A AACA+E+IH SL+H
Sbjct: 24 PPLPQLERLYQAMRYSVMNGGKRVRPLLVYAACEALNGDKASADGAACAVELIHAYSLVH 83
Query: 143 DDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRV-VRAIA 201
DDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA E +A + +R A
Sbjct: 84 DDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEAMAQERHNPQDAALRLRMFA 143
Query: 202 EMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGG-GNAI 260
+ A G G+V G+ +D+ S G + LE +H HKT L+EA+V GA+ G +A
Sbjct: 144 VLARAAGPAGMVGGQAIDLGSVGLKLDRDALELMHRHKTGALIEASVQLGALASGRADAD 203
Query: 261 EVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFA 320
+ + YAR IGL FQV DDILDV + LGK G D+A K TYP L+G++ AK++A
Sbjct: 204 NLASLSQYARAIGLAFQVQDDILDVESDTATLGKHQGADIARDKPTYPALLGMDAAKAYA 263
Query: 321 GELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
EL QA+ L F+ + A PL LA YI R+N
Sbjct: 264 LELRDQALHALRPFDFA-AEPLRELARYIVERRN 296
>gi|330505134|ref|YP_004382003.1| farnesyl-diphosphate synthase [Pseudomonas mendocina NK-01]
gi|328919420|gb|AEB60251.1| farnesyl-diphosphate synthase [Pseudomonas mendocina NK-01]
Length = 295
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 133/303 (43%), Positives = 183/303 (60%), Gaps = 27/303 (8%)
Query: 67 YMIRKAEQVNKALDEAVVLQPPV----KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
Y R +V+ AL++ + Q P ++++AMRYS++ GGKRVRPLL A+CE + GD
Sbjct: 5 YQKRCQTRVDTALEQ--LFQAPRTELERLYQAMRYSVMNGGKRVRPLLVYAACEALEGDI 62
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E++AILAGDAL SLA
Sbjct: 63 ERADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEASAILAGDALQSLAF- 121
Query: 183 HVAVNIAGVSPDR---------VVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELE 233
GV DR ++ + + A G G+V G+ +D+ S G + + LE
Sbjct: 122 -------GVLADRRRNPQNTETRLQMVELLSQAAGPAGMVGGQAIDLGSVGLQLDQQALE 174
Query: 234 YIHVHKTAKLLEAAVVCGAVIGGGNAIEVER--VRNYARCIGLLFQVVDDILDVTKSSEE 291
+H HKT L+EA+V GA + GN E+ R + Y+R IGL FQV DDILDV +
Sbjct: 175 IMHRHKTGALIEASVALGA-LASGNTDELARKALLQYSRAIGLAFQVQDDILDVESDTAT 233
Query: 292 LGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIAS 351
LGKT GKD A K TYP L+G++ AK +A EL QA+ L F + A PL LA YI
Sbjct: 234 LGKTQGKDEAHDKPTYPALLGLDAAKDYALELRDQALHVLRPF-GNSAEPLRELARYIVE 292
Query: 352 RQN 354
R++
Sbjct: 293 RRS 295
>gi|407790844|ref|ZP_11137935.1| farnesyl-diphosphate synthase [Gallaecimonas xiamenensis 3-C-1]
gi|407202391|gb|EKE72383.1| farnesyl-diphosphate synthase [Gallaecimonas xiamenensis 3-C-1]
Length = 293
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/281 (42%), Positives = 170/281 (60%), Gaps = 6/281 (2%)
Query: 75 VNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEM 134
+ + LD+ L P ++ AMR+ LL GGKRVRP L ++ ++G E P A A+E
Sbjct: 18 LGQCLDQQPALAP--RLLGAMRHGLLLGGKRVRPFLVYSTGTMLGLAEEALDPLAAAVES 75
Query: 135 IHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPD 194
IH SLIHDDLP +D+DE RR +P H F E+TAILAGDAL +LA E +A A V+
Sbjct: 76 IHAYSLIHDDLPAMDDDELRRGQPTVHVAFDEATAILAGDALQALAFEELAK--AQVADA 133
Query: 195 RVVRAIAEMCS-AMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAV 253
+A+ + S A G G+V G+ +DIA+ G+ + LK LE +H HKT L+ A+V+ A+
Sbjct: 134 ATFKALLLLLSRAAGFAGMVGGQALDIAATGQALDLKALEQVHAHKTGALIRASVLLPAL 193
Query: 254 IGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGI 313
G + + + + +A +GL FQV DDILD+T ++ LGKT GKD KATYP L+G+
Sbjct: 194 AAGISDAQYQSLATFAEKLGLAFQVQDDILDITADTQVLGKTQGKDQRDDKATYPALLGL 253
Query: 314 ENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
AK+ A L+ +A+ LA + L LA Y+ +R+
Sbjct: 254 NQAKTMAQSLVDEALSCLASLP-YNSEHLAALARYVITRER 293
>gi|407710083|ref|YP_006793947.1| farnesyl diphosphate synthase [Burkholderia phenoliruptrix BR3459a]
gi|407238766|gb|AFT88964.1| farnesyl diphosphate synthase [Burkholderia phenoliruptrix BR3459a]
Length = 293
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/294 (42%), Positives = 176/294 (59%), Gaps = 6/294 (2%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
FE++M +V AL+ + + P K+H+AMRY++L GGKRVRPLLC A+ EL G
Sbjct: 1 MTFEQWMRSVLGRVEAALEHYLPAETIEPAKLHEAMRYAVLGGGKRVRPLLCHAAGELTG 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
AA ALEMIH SL+HDD+P +D+D RR KP H + E+TA+L GDAL S
Sbjct: 61 ARAECLDAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQ 120
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A VA+ ++P + + E+ A G G+ G+ +D+AS G ++ ++LE +H K
Sbjct: 121 AF--VALTSDVLAPAQQAALVRELALASGSIGMCGGQAIDLASVGHTLTREQLETMHRMK 178
Query: 240 TAKLLEAAVVCGAVIGGG-NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
T LL AAV GA+ G +A + + Y+ +GL FQVVDDILDVT S LGKTAGK
Sbjct: 179 TGALLRAAVRMGALAGEAPDANAMRSLDAYSAAVGLAFQVVDDILDVTTDSATLGKTAGK 238
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
D GK TY ++G++ +++ A +L A LA F A +A L LA+ + +R
Sbjct: 239 DAKDGKPTYVSIIGLDASRALAAQLRSDAHAALAPFGA-RAQRLAELADLVVNR 291
>gi|146284017|ref|YP_001174170.1| geranyltranstransferase [Pseudomonas stutzeri A1501]
gi|145572222|gb|ABP81328.1| geranyltranstransferase [Pseudomonas stutzeri A1501]
Length = 295
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/274 (45%), Positives = 173/274 (63%), Gaps = 7/274 (2%)
Query: 87 PPV----KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIH 142
PP+ ++++AMRYS++ GGKRVRPLL A+CE + GD++ A AACA+E+IH SL+H
Sbjct: 23 PPLPQLERLYQAMRYSVMNGGKRVRPLLVYAACEALNGDKASADGAACAVELIHAYSLVH 82
Query: 143 DDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRV-VRAIA 201
DDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA E +A + +R A
Sbjct: 83 DDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEAMAQERHNPQDAALRLRMFA 142
Query: 202 EMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGG-GNAI 260
+ A G G+V G+ +D+ S G + LE +H HKT L+EA+V GA+ G +A
Sbjct: 143 VLARAAGPAGMVGGQAIDLGSVGLKLDRDALELMHRHKTGALIEASVQLGALASGRADAD 202
Query: 261 EVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFA 320
+ + YAR IGL FQV DDILDV + LGK G D+A K TYP L+G++ AK++A
Sbjct: 203 NLASLSQYARAIGLAFQVQDDILDVESDTATLGKHQGADIARDKPTYPALLGMDAAKAYA 262
Query: 321 GELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
EL QA+ L F+ + A PL LA YI R+N
Sbjct: 263 LELRDQALHALRPFDFA-AEPLRELARYIVERRN 295
>gi|345430245|ref|YP_004823365.1| geranyltranstransferase [Haemophilus parainfluenzae T3T1]
gi|301156308|emb|CBW15779.1| geranyltranstransferase [Haemophilus parainfluenzae T3T1]
Length = 297
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 117/266 (43%), Positives = 162/266 (60%), Gaps = 4/266 (1%)
Query: 91 IHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDN 150
+ AM+Y LL GGKRVRP L A+ +++G + S AA A+E IH SLIHDDLP +DN
Sbjct: 34 LRDAMKYGLLLGGKRVRPFLVYATGKMLGAEMSALDYAAAAIESIHAYSLIHDDLPAMDN 93
Query: 151 DERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVE 210
DE RR +P H F E+TAILAGDAL + A E + +S ++ ++ + + A GV+
Sbjct: 94 DELRRGQPTCHIAFDEATAILAGDALQAFAFE-ILTEAPSLSAEQKLQLVKVLAQASGVQ 152
Query: 211 GLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGG--NAIEVERVRNY 268
G+ G+ +D+ SE K V+L ELE IH +KT LL AA+ G + N +++ Y
Sbjct: 153 GMCLGQSLDLISEHKQVNLDELELIHRNKTGALLTAALKLGFICSPHFENKELEQQLERY 212
Query: 269 ARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAI 328
++ IGL FQV DDILD+ +S E+GK G DL K+TYPKL+G+E AK A EL A+
Sbjct: 213 SQAIGLAFQVQDDILDIEGNSAEIGKPVGSDLDLDKSTYPKLLGLEGAKQKAQELYHTAL 272
Query: 329 EELAYFEASKAAPLYFLANYIASRQN 354
EL A L LA +I +R++
Sbjct: 273 HELDNLPFDTTA-LRALAEFIVNRKS 297
>gi|124267817|ref|YP_001021821.1| farnesyl-diphosphate synthase [Methylibium petroleiphilum PM1]
gi|124260592|gb|ABM95586.1| farnesyl-diphosphate synthase [Methylibium petroleiphilum PM1]
Length = 297
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 166/290 (57%), Gaps = 1/290 (0%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG-DE 122
F+ + + EQV AL+ V P + AMRY +L GGKR+RPLL +++ E VG D
Sbjct: 6 FDTWSRDRLEQVEAALERWVPALAPAGLGDAMRYGVLDGGKRLRPLLVLSAAEAVGATDS 65
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
A+ AAC++E+IH SLIHDD+P +D+D RR KP H FG++ A+LAGDA+ +LA E
Sbjct: 66 EAALRAACSVELIHAYSLIHDDMPCMDDDVLRRGKPTVHVKFGQAQAMLAGDAMQALAFE 125
Query: 183 HVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAK 242
+ V R + A G +G+ G+ +D+AS G+ + + L +H KT
Sbjct: 126 VLTPEDDSVPLALQARLCGLLARAAGQDGMAGGQAIDLASIGRPLDEQSLSDMHRRKTGA 185
Query: 243 LLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
LL+A+V+ GA G + + + Y +GL FQVVDDILDVT++S LGKTAGKD
Sbjct: 186 LLQASVMMGAACGDASPQARQALSEYGAALGLAFQVVDDILDVTQASSTLGKTAGKDADQ 245
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
K TY ++G+ A+ A L QA LA AA L LA+ + R
Sbjct: 246 NKPTYVTVLGLSAAQRRAQTLREQAQAALARSGLPDAAWLSVLADKVVER 295
>gi|298370440|ref|ZP_06981756.1| geranyltranstransferase [Neisseria sp. oral taxon 014 str. F0314]
gi|298281900|gb|EFI23389.1| geranyltranstransferase [Neisseria sp. oral taxon 014 str. F0314]
Length = 298
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 112/270 (41%), Positives = 165/270 (61%), Gaps = 3/270 (1%)
Query: 86 QPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDL 145
Q P +H+AMRY L GGKR+RPLL +A+ EL D++ A A+EM+H SL+HDD+
Sbjct: 31 QVPHTLHEAMRYVTLGGGKRLRPLLVLAASELGDADQNAVEQAMAAIEMVHVYSLVHDDM 90
Query: 146 PFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCS 205
P +DND RR KP H + E+TA+L GDAL + A + V G+ +R + ++ +
Sbjct: 91 PAMDNDSLRRGKPTCHVKYDEATALLVGDALQTQAFD-VLSRPTGLPAERQIAMLSTLAK 149
Query: 206 AMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGG-NAIEVER 264
A G G+ G+ +D+A+ GK ++ +LE +H KT L+ AA V GA+ ++ +V
Sbjct: 150 ASGSLGMAGGQAIDLANVGKAMNQAQLEQMHSLKTGALIRAAAVLGALACPDLDSDDVRT 209
Query: 265 VRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELL 324
+ NYA +GL FQV+DD+LD + LGKTAGKD + K TY KLMG++ A+++A L
Sbjct: 210 LDNYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDSDNDKPTYVKLMGLQTARAYAETLT 269
Query: 325 GQAIEELAYFEASKAAPLYFLANYIASRQN 354
+A L F A KA L LA ++ +R+N
Sbjct: 270 AEATALLEPFGA-KALRLNQLAQFVTARKN 298
>gi|172062807|ref|YP_001810458.1| polyprenyl synthetase [Burkholderia ambifaria MC40-6]
gi|171995324|gb|ACB66242.1| Polyprenyl synthetase [Burkholderia ambifaria MC40-6]
Length = 294
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 127/297 (42%), Positives = 178/297 (59%), Gaps = 11/297 (3%)
Query: 62 FPFEEYMIRKAEQVNKALD-----EAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCE 116
FE++M ++V AL E VV P ++H+AMRY++L GGKRVRPLLC A+ E
Sbjct: 1 MTFEQWMRSVLDRVEDALGHYLPAENVV---PTQLHEAMRYAVLGGGKRVRPLLCHAAGE 57
Query: 117 LVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDAL 176
L G E+ AA ALEMIH SL+HDD+P +D+D RR KP H + E TA+L GDAL
Sbjct: 58 LTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDAL 117
Query: 177 LSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIH 236
S A + ++ +SP + + E+ A G G+ G+ +D+AS G ++ ++LE +H
Sbjct: 118 QSQAFVAL-TDVDALSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLEKMH 176
Query: 237 VHKTAKLLEAAVVCGAVIGGGNAIEVERVRN-YARCIGLLFQVVDDILDVTKSSEELGKT 295
KT LL AAV GA+ G + E + YA +GL FQVVDDILDVT S LGKT
Sbjct: 177 RMKTGALLRAAVRMGALAGDTPSAETLAALDVYAAAVGLAFQVVDDILDVTTDSATLGKT 236
Query: 296 AGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
AGKD A+ K TY ++G++ ++ A +L +A + L F A +A L LA+ + +R
Sbjct: 237 AGKDAANDKPTYVSILGLDASRELAAQLRAEAHDALKPFGA-RAQRLAELADLVVNR 292
>gi|294785112|ref|ZP_06750400.1| geranyltranstransferase [Fusobacterium sp. 3_1_27]
gi|294486826|gb|EFG34188.1| geranyltranstransferase [Fusobacterium sp. 3_1_27]
Length = 297
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 114/296 (38%), Positives = 172/296 (58%), Gaps = 9/296 (3%)
Query: 64 FEEYMIRKAE----QVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
F+ Y+ K + ++ K L E L P I K M Y+ L GGKR+RP L A+ EL+
Sbjct: 4 FQVYLKEKTDFFETELKKELKE---LSYPEIIAKGMEYATLNGGKRLRPFLLFATLELLN 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
+ + +A ALEMIH+ SL+HDDLP LDND+ RR K +H+VFGE+ IL GD+LL+
Sbjct: 61 ENIKKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTY 120
Query: 180 ALEHVAV-NIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
A ++ N+ +S +++V I++ G+ G++ G+ +DI SE K + L+ L+YIH H
Sbjct: 121 AFYVLSQKNLELLSSEQIVNIISKTSEYAGINGMIGGQMIDIESENKKIGLETLKYIHSH 180
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT KL++ + +I + + + YA IGL FQV DDILDV + E+LGK G
Sbjct: 181 KTGKLIKLPIEIACIIANVEKDKRKVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGS 240
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELA-YFEASKAAPLYFLANYIASRQ 353
D+ KATYP ++G++ +K + + +A E + F L LA++I R
Sbjct: 241 DVDLHKATYPSILGMKESKKILNDTVEKAKEIIKNKFGEKTGKILISLADFIKDRN 296
>gi|194016844|ref|ZP_03055457.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Bacillus pumilus ATCC 7061]
gi|194011450|gb|EDW21019.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Bacillus pumilus ATCC 7061]
Length = 296
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 120/296 (40%), Positives = 183/296 (61%), Gaps = 3/296 (1%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVV-LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
T E++ + + + L V L P + +M YSL AGGKR+RP+L +A G
Sbjct: 2 TSNLNEFLTTRKQTIEDYLFTYVQELTIPEDLKSSMLYSLKAGGKRLRPVLVLALLNAYG 61
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
+E +P CA+EMIHT SLIHDDLP +D+D+ RR KP +H+V+GE+TA+LAGDALL+
Sbjct: 62 KNEEDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVYGEATAVLAGDALLTE 121
Query: 180 ALEHVAVNIAG-VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
+ + ++ VS D+ +R + E+ + G G+V G+F D+ +E K VSL ELE IH
Sbjct: 122 SFRLITSQLSSSVSADKKLRIVDELVKSAGALGMVGGQFDDMEAEQKQVSLAELESIHAR 181
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT KLL +V GA++ G + ++E++R ++ IG+ FQ+ DDILD+ S E++GK G
Sbjct: 182 KTGKLLTFSVAAGAMLAGASDDDIEKLREFSYHIGIAFQIRDDILDLEGSEEKIGKRVGS 241
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
D A+ K+TYP L+ + AK E + +A E ++ + + L+ L + IASR +
Sbjct: 242 DTANEKSTYPSLLTLSGAKEKLHEHITRAKEIVSNLQLEQQL-LHDLCDLIASRDH 296
>gi|153870661|ref|ZP_02000013.1| Polyprenyl synthetase [Beggiatoa sp. PS]
gi|152072868|gb|EDN69982.1| Polyprenyl synthetase [Beggiatoa sp. PS]
Length = 296
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 129/300 (43%), Positives = 177/300 (59%), Gaps = 13/300 (4%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
E M ++V ALD + + P+ +H+AMRYS+ GGKRVRPLL + +
Sbjct: 1 MSLELLMTTYRQRVESALDTWLPMTTIQPIHLHEAMRYSVFNGGKRVRPLLVYLTGAALN 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
+ A A+E+IH SL+HDDLP +D+D+ RR KP H+ F E+TAILAGDAL +L
Sbjct: 61 VNPISLDAPASAVELIHAYSLVHDDLPAMDDDDLRRGKPTCHKAFDEATAILAGDALQTL 120
Query: 180 A---LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIH 236
A L H N S R + I + A G G+ G+ +D+ S G+ +++ ELE +H
Sbjct: 121 AFYVLSHD--NNLQNSDKRRLEMIETLALASGSRGMAGGQAIDMESVGRSLNVAELENMH 178
Query: 237 VHKTAKLLEAAVVCGAVIGGGNAIEV---ERVRNYARCIGLLFQVVDDILDVTKSSEELG 293
+HKT L+ A+V GA+ N IEV E++ +YA+CIGL FQ+ DDILDV S+ LG
Sbjct: 179 IHKTGALIRASVKMGAL--ACNVIEVNQLEKLDHYAKCIGLAFQIQDDILDVESSTTVLG 236
Query: 294 KTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
K G D+A K TYP L+G+ AK A EL+ AI L F+ KA PL ++A YI RQ
Sbjct: 237 KAQGADIAHNKVTYPSLLGLNQAKQMAQELITDAITSLTNFD-QKADPLRWIAEYIIKRQ 295
>gi|399006274|ref|ZP_10708801.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM17]
gi|398122440|gb|EJM12032.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM17]
Length = 295
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 129/292 (44%), Positives = 181/292 (61%), Gaps = 5/292 (1%)
Query: 67 YMIRKAEQVNKALDEAVVLQPP--VKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW 124
Y +VN AL+ P ++++AMRYS++ GGKRVRPLL A+CE +G
Sbjct: 5 YQASSQARVNAALETLFHAPSPELARLYQAMRYSVMNGGKRVRPLLAYAACEALGARPEQ 64
Query: 125 AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV 184
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA +
Sbjct: 65 ANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSAL 124
Query: 185 A-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
++ S + +R ++ + A G G+V G+ +D+ S G + K LEY+H HKT L
Sbjct: 125 LDPRLSDSSAEIRLRMVSALALAAGPAGMVGGQAIDLGSVGLKLDQKALEYMHRHKTGAL 184
Query: 244 LEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
+EA+V GA+ G E++ ++ YA+ IGL FQV DDILDV +E LGK G D+A
Sbjct: 185 IEASVKLGALASGRAEKDELKSLQTYAQAIGLAFQVQDDILDVESDTETLGKRQGADIAR 244
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TYP L+G+E AK++A EL QA+ L F+A A PL LA YI R++
Sbjct: 245 DKPTYPALLGLEAAKAYALELRDQALHALRPFDAD-AEPLRELARYIVERRS 295
>gi|293604269|ref|ZP_06686676.1| geranyltranstransferase [Achromobacter piechaudii ATCC 43553]
gi|292817146|gb|EFF76220.1| geranyltranstransferase [Achromobacter piechaudii ATCC 43553]
Length = 303
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 112/273 (41%), Positives = 163/273 (59%), Gaps = 16/273 (5%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPP-----VKIHKAMRYSLLAGGKRVRPLLCIAS-- 114
PF E++ + V LD+ L PP V++H+AMRY++L GGKRVR + A+
Sbjct: 6 LPFAEWLQGRVRHVEDVLDD---LMPPAEVLPVRLHEAMRYAVLGGGKRVRAAMVYAAGQ 62
Query: 115 -CELVG---GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAI 170
C + G E+ AA A+E+IH SL+HDDLP +DND RR +P +H F E+TA+
Sbjct: 63 ACPVSGSVLAIEASLDRAAAAVELIHAYSLVHDDLPCMDNDTLRRGRPTTHVQFDEATAM 122
Query: 171 LAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLK 230
LAGDAL LA + +A ++P +V+A + A G +G+ G+ +D+ S G +S
Sbjct: 123 LAGDALQPLAFDLLASM--PIAPALIVQATQSLARAAGSQGMAGGQAIDLLSVGHSLSRD 180
Query: 231 ELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSE 290
EL+ +H KT +L +V G ++ G ++ + + YA+ +GL FQVVDDILDVT +
Sbjct: 181 ELQTMHSMKTGAMLACSVALGGIVAGASSASRQALDAYAQAMGLAFQVVDDILDVTADTA 240
Query: 291 ELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
LGKT GKD A K TY L+G+ A++FA EL
Sbjct: 241 SLGKTPGKDAAENKPTYVSLLGLSEARAFAEEL 273
>gi|254787182|ref|YP_003074611.1| geranyltranstransferase [Teredinibacter turnerae T7901]
gi|237687258|gb|ACR14522.1| geranyltranstransferase [Teredinibacter turnerae T7901]
Length = 295
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 123/297 (41%), Positives = 170/297 (57%), Gaps = 12/297 (4%)
Query: 64 FEEYMIRKAEQVNKALD----EAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
+E++ + QVN+ L+ A + P ++ +AMRYSL+ GGKR+RP L A+ V
Sbjct: 5 LQEFINDTSLQVNRCLEGWTHPADAVAP--RVTEAMRYSLMNGGKRIRPTLVYAAARAVS 62
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
+ A A+E IH SLIHDDLP +DND+ RR KP H F E+TAILAGD L +L
Sbjct: 63 VPNEATLAGAGAVECIHAYSLIHDDLPAMDNDDLRRGKPTCHIAFDEATAILAGDGLQTL 122
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEG--KDVSLKELEYIHV 237
A E ++ P V I + A G +G+VAG+ +D+ SEG + ++ LE IH
Sbjct: 123 AFEKLSTI---EDPATAVAMIRTLALASGDKGMVAGQMIDMESEGLQQAFTISHLEKIHR 179
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
HKT L+ AAV+ GA + + + + YA IGL FQV DDILDV + LGK G
Sbjct: 180 HKTGALIRAAVLMGARSVQASQEQTQSLIRYADAIGLAFQVQDDILDVISDTATLGKRQG 239
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
DL KATY L+G+ A+ A +L A+ L F AS A PL ++A+YI +R +
Sbjct: 240 ADLEHEKATYVSLLGLREAREKARDLHATALSSLQSF-ASSADPLRWVADYIVTRSH 295
>gi|378953114|ref|YP_005210602.1| IspA protein [Pseudomonas fluorescens F113]
gi|359763128|gb|AEV65207.1| IspA [Pseudomonas fluorescens F113]
Length = 295
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 128/292 (43%), Positives = 180/292 (61%), Gaps = 5/292 (1%)
Query: 67 YMIRKAEQVNKALDEAVVLQPP--VKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW 124
Y +VN ALD P ++++AMRYS++ GGKRVRPLL A+CE +GG
Sbjct: 5 YQASSQARVNAALDSLFSAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGQAEQ 64
Query: 125 AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV 184
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA +
Sbjct: 65 ANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKQFDEACAILAGDGLQSLAFSAL 124
Query: 185 AVNIAGVSPDRV-VRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
P +V + ++ + A G G+V G+ +D+ S G + LEY+H HKT L
Sbjct: 125 LDPALSDCPAQVRLDMVSALALAAGPAGMVGGQAIDLGSVGLKLDQSALEYMHRHKTGAL 184
Query: 244 LEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
+EA+V GA+ G +++ ++ YAR IGL FQV DDILDV ++ LGK G D+A
Sbjct: 185 IEASVKLGALASGRATPAQLQALQTYARAIGLAFQVQDDILDVESDTQTLGKRQGADIAR 244
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TYP L+G++ AK++A EL QA+ L F+A+ A PL LA YI R++
Sbjct: 245 DKPTYPALLGLDAAKAYALELRDQALAALRPFDAA-AEPLRDLARYIVERRS 295
>gi|399053798|ref|ZP_10742597.1| geranylgeranyl pyrophosphate synthase [Brevibacillus sp. CF112]
gi|433542484|ref|ZP_20498911.1| geranyltranstransferase [Brevibacillus agri BAB-2500]
gi|398048575|gb|EJL41047.1| geranylgeranyl pyrophosphate synthase [Brevibacillus sp. CF112]
gi|432186295|gb|ELK43769.1| geranyltranstransferase [Brevibacillus agri BAB-2500]
Length = 297
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 115/258 (44%), Positives = 165/258 (63%), Gaps = 4/258 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQP-PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
F++Y+ K + + L A+ Q P +++++M+YSL+AGGKR+RP+L +A E +
Sbjct: 4 FQQYLAEKTSYIEQHLLPALEQQGVPTQLYESMKYSLMAGGKRLRPMLVLAVLEALDKPM 63
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
+P A ALEMIHT SLIHDDLP +D+D+ RR KPA+H+VFGE+TAILAGDALL+ A
Sbjct: 64 ERGVPFAVALEMIHTYSLIHDDLPAMDDDDLRRGKPANHKVFGEATAILAGDALLTRAFA 123
Query: 183 HVA---VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
++A + V+P V+ IAE+ G G+V G+ DI EGK + L++LE+IH HK
Sbjct: 124 YIAEAYQERSDVAPITTVKLIAELGKRAGATGMVGGQMADIEGEGKQLDLEQLEFIHRHK 183
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T LL AA+ G + + +++ + Y CIGL FQ+ DDIL+V + ELGK G D
Sbjct: 184 TGDLLVAALRGGGYLAEASEAQMDALTRYGVCIGLAFQIQDDILNVEGDAAELGKAVGSD 243
Query: 300 LASGKATYPKLMGIENAK 317
K TYP L+G+ +K
Sbjct: 244 ADREKVTYPSLLGLAESK 261
>gi|337286891|ref|YP_004626364.1| Polyprenyl synthetase [Thermodesulfatator indicus DSM 15286]
gi|335359719|gb|AEH45400.1| Polyprenyl synthetase [Thermodesulfatator indicus DSM 15286]
Length = 300
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 126/294 (42%), Positives = 184/294 (62%), Gaps = 5/294 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAV--VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F +++ K E VN+AL+ V + ++ +AM YSL++GGKR+RP+L +A E GG
Sbjct: 7 FFDWLKSKQELVNRALEFYVPYLDGQARRLFEAMHYSLMSGGKRLRPILVMAGAEAAGGK 66
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
+PAACA+E IHT SLIHDDLP +D+D+ RR KP H+ F E+TAILAGD LL+ A
Sbjct: 67 PEDVLPAACAIECIHTYSLIHDDLPAMDDDDLRRGKPTCHKAFDEATAILAGDGLLTHAF 126
Query: 182 EHVA-VNIAGVSP-DRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
+A +A P + ++ I + A G+ G+VAG+ D+ +EG++V+ +EL +IH HK
Sbjct: 127 RLLAHEELADKFPQENLLEGIRLVAEAAGLYGMVAGQMADLLAEGRNVTAEELAFIHRHK 186
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
TA L+ A+V+ GA + G E E + +Y IG FQ++DDILD+T + LGK G D
Sbjct: 187 TAALIRASVLLGATLVGTGKKEKEALSSYGWNIGHAFQIIDDILDLTADEKTLGKPIGSD 246
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
L KATYP L G+E +++ A LL +A+ +A KA L +A Y+ R+
Sbjct: 247 LKKKKATYPALFGLEASRAKARSLLEEALSSIAIL-GDKAKTLADIAYYVLERK 299
>gi|385206458|ref|ZP_10033328.1| geranylgeranyl pyrophosphate synthase [Burkholderia sp. Ch1-1]
gi|385186349|gb|EIF35623.1| geranylgeranyl pyrophosphate synthase [Burkholderia sp. Ch1-1]
Length = 293
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 125/294 (42%), Positives = 175/294 (59%), Gaps = 6/294 (2%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
FE++M E+V AL+ + + P +H+AMRY++L GGKRVRPLLC A+ EL G
Sbjct: 1 MTFEQWMRSVLERVETALEHYLPGEATEPATLHEAMRYAVLGGGKRVRPLLCHAAGELTG 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
AA ALEMIH SL+HDD+P +D+D RR KP H + E+TA+L GDAL S
Sbjct: 61 ARAECLDAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQ 120
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A VA+ ++P + + E+ A G G+ G+ +D+AS G ++ +LE +H K
Sbjct: 121 AF--VALTSEVLAPAQQAALVRELALASGSIGMCGGQAIDLASVGHTLTRTQLETMHRMK 178
Query: 240 TAKLLEAAVVCGAVIGGG-NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
T LL AAV GA+ G +A + + Y+ +GL FQVVDDILDVT S LGKTAGK
Sbjct: 179 TGALLRAAVRMGALAGETPDADAMRSLDAYSAAVGLAFQVVDDILDVTTDSATLGKTAGK 238
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
D GK TY ++G++ +++ A +L A LA F A +A L LA+ + +R
Sbjct: 239 DAKDGKPTYVSIIGLDASRALAAQLRSDAHAALAPFGA-RAQRLAELADLVVNR 291
>gi|365157809|ref|ZP_09354054.1| hypothetical protein HMPREF1015_00214 [Bacillus smithii 7_3_47FAA]
gi|363622479|gb|EHL73638.1| hypothetical protein HMPREF1015_00214 [Bacillus smithii 7_3_47FAA]
Length = 295
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 124/268 (46%), Positives = 171/268 (63%), Gaps = 3/268 (1%)
Query: 87 PPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLP 146
PPV + +AM YSL AGGKR+RP+L A+ G D M AA ALEMIHT SLIHDDLP
Sbjct: 31 PPV-LKEAMDYSLQAGGKRIRPVLLFAAINSFGKDPERGMDAAAALEMIHTYSLIHDDLP 89
Query: 147 FLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSA 206
+D+D+ RR KP +H+V+GE+ AILAGDALL+ A + +A + +S V I ++ A
Sbjct: 90 SMDDDDLRRGKPTNHKVYGEANAILAGDALLTYAFQIIAQS-PDLSEKEKVAIIEQLAKA 148
Query: 207 MGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVR 266
G EG+VAG+ D+ E K ++L+ELE +H +KT +L+ +V GA+IGG E+
Sbjct: 149 AGPEGMVAGQVADMEGEKKALTLEELEAVHRNKTGRLIAFSVRAGALIGGATEAELAVFE 208
Query: 267 NYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQ 326
YA IG+ FQ+ DDILD+ S E+LGK G D+A+ K TYP L+ + A+ E + Q
Sbjct: 209 KYAYHIGIAFQIQDDILDIVGSEEKLGKRVGSDIANHKNTYPALLTVRGAREKLKEHVDQ 268
Query: 327 AIEELAYFEASKAAPLYFLANYIASRQN 354
AIEEL + + A L +A IA+R +
Sbjct: 269 AIEELNRLDI-ETALLKDIALMIATRDS 295
>gi|345870699|ref|ZP_08822650.1| Geranyltranstransferase [Thiorhodococcus drewsii AZ1]
gi|343921512|gb|EGV32228.1| Geranyltranstransferase [Thiorhodococcus drewsii AZ1]
Length = 297
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 121/297 (40%), Positives = 184/297 (61%), Gaps = 11/297 (3%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPV-----KIHKAMRYSLLAGGKRVRPLLCIASCELV 118
+ + R +V+ LDE L PPV ++H+AMRYS L+ GKR+RPLL A+ +
Sbjct: 6 LDAFRARCQARVDTTLDE---LLPPVSVEPARLHEAMRYSALSNGKRLRPLLTYAAGAAL 62
Query: 119 GGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLS 178
G + ACA+E+IH SLIHDDLP +D+D+ RR +P H+ + E+TAILAGDAL +
Sbjct: 63 GIESDLLDRPACAVELIHAYSLIHDDLPAMDDDDLRRGRPTCHKAYDEATAILAGDALQT 122
Query: 179 LALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
LA + ++ G++ + V + + A G G+V G+ +D+A+EGK + + LE+IH+H
Sbjct: 123 LAFQALS-EAPGIAAENRVLMVEALARASGARGMVGGQAMDLAAEGKPLDVAMLEHIHIH 181
Query: 239 KTAKLLEAAVVCGAVIGGG-NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
KT L+ A+V G + G + +R+ YA+C+GL FQ+ DD+LDV + E+GKTAG
Sbjct: 182 KTGALIRASVQMGMLAHGSLDPDHSQRLDRYAKCLGLAFQIQDDVLDVEGDTAEIGKTAG 241
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+D A KATYP L+G+ AK A L+ +A+ + F A A PL ++A + R++
Sbjct: 242 RDQALNKATYPSLVGLTEAKEMAANLIAEALSAIEIFPAG-ADPLRWIAGGLLGRKS 297
>gi|187921415|ref|YP_001890447.1| polyprenyl synthetase [Burkholderia phytofirmans PsJN]
gi|187719853|gb|ACD21076.1| Polyprenyl synthetase [Burkholderia phytofirmans PsJN]
Length = 293
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 123/294 (41%), Positives = 175/294 (59%), Gaps = 6/294 (2%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
FE++M E+V AL+ + + P +H+AMRY++L GGKRVRPLLC A+ EL G
Sbjct: 1 MTFEQWMRSVLERVETALEYYLPTEATEPATLHEAMRYAVLGGGKRVRPLLCHAAGELTG 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
AA ALEMIH SL+HDD+P +D+D RR KP H + E+TA+L GDAL S
Sbjct: 61 ARAECLDAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQ 120
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A + ++ ++P + + E+ A G G+ G+ +D+AS G ++ +LE +H K
Sbjct: 121 AFVSLTSDV--LAPAQQAALVRELALASGSIGMCGGQAIDLASVGHTLTRTQLETMHRMK 178
Query: 240 TAKLLEAAVVCGAVIGGG-NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
T LL AAV GA+ G +A + + Y+ +GL FQVVDDILDVT S LGKTAGK
Sbjct: 179 TGALLRAAVRMGALAGETPDADAMRSLDAYSAAVGLAFQVVDDILDVTTDSATLGKTAGK 238
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
D GK TY ++G++ +++ A +L A LA F A +A L LA+ + +R
Sbjct: 239 DAKDGKPTYVSIIGLDASRALAAQLRSDAHAALAPFGA-RAQRLAELADLVVNR 291
>gi|398858335|ref|ZP_10614027.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM79]
gi|398239647|gb|EJN25354.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM79]
Length = 295
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 128/294 (43%), Positives = 185/294 (62%), Gaps = 9/294 (3%)
Query: 67 YMIRKAEQVNKALDEAVVLQPP----VKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
Y +VN AL+ + PP ++++AMRYS++ GGKRVRPLL A+CE +GG
Sbjct: 5 YSATSQARVNAALE--TLFNPPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGKA 62
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 63 EQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAFS 122
Query: 183 HVA-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
+ ++ + ++ ++ + A G G+V G+ +D+ S G + K LEY+H HKT
Sbjct: 123 ALLDPRLSSCDAETRLQMVSALALAAGPAGMVGGQAIDLGSVGLKLDQKALEYMHRHKTG 182
Query: 242 KLLEAAVVCGAVIGGGNAI-EVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
L+E +V GA+ G A E++ +++YA+ IGL FQV DDILDV +E LGK G D+
Sbjct: 183 ALIEVSVKLGALASGHAAKDELKSLQSYAQAIGLAFQVQDDILDVESDTETLGKRQGADI 242
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A K TYP L+G++ AK++A EL QA+ L F+A+ A PL LA YI R++
Sbjct: 243 ARDKPTYPALLGLDAAKAYALELRDQALHALRPFDAA-AEPLRDLARYIVDRRS 295
>gi|421477013|ref|ZP_15924866.1| polyprenyl synthetase [Burkholderia multivorans CF2]
gi|400227328|gb|EJO57335.1| polyprenyl synthetase [Burkholderia multivorans CF2]
Length = 294
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 127/297 (42%), Positives = 179/297 (60%), Gaps = 11/297 (3%)
Query: 62 FPFEEYMIRKAEQVNKALD-----EAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCE 116
FE++M ++V AL + VV P ++H+AMRY++L GGKRVRPLLC A+ E
Sbjct: 1 MTFEQWMRSVLDRVEDALGHYLPADTVV---PARLHEAMRYAVLGGGKRVRPLLCHAAGE 57
Query: 117 LVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDAL 176
L G E+ AA ALEMIH SL+HDD+P +D+D RR KP H + E TA+L GDAL
Sbjct: 58 LTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDAL 117
Query: 177 LSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIH 236
S A + + A +SP + + E+ A G G+ G+ +D+AS G ++ ++LE +H
Sbjct: 118 QSQAFVAL-TDAAALSPVQQAALVRELALASGSLGMAGGQAIDLASVGVKLTREQLETMH 176
Query: 237 VHKTAKLLEAAVVCGAVIGGG-NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKT 295
KT LL AAV GA+ G +A + + YA +GL FQVVDDILDVT S LGKT
Sbjct: 177 RMKTGALLRAAVRMGALAGDTPSADTMAALDVYAGAVGLAFQVVDDILDVTTDSATLGKT 236
Query: 296 AGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
AGKD A+ K TY ++G++ ++ A +L +A + L F A +A L LA+ + +R
Sbjct: 237 AGKDAANDKPTYVSILGLDASRELAAQLRAEAHDALKPFGA-RAQRLAELADLVVNR 292
>gi|386022367|ref|YP_005940392.1| geranyltranstransferase [Pseudomonas stutzeri DSM 4166]
gi|327482340|gb|AEA85650.1| geranyltranstransferase [Pseudomonas stutzeri DSM 4166]
Length = 295
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 127/276 (46%), Positives = 174/276 (63%), Gaps = 11/276 (3%)
Query: 87 PPV----KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIH 142
PP+ ++++AMRYS++ GGKRVRPLL A+CE + GD++ A AACA+E+IH SL+H
Sbjct: 23 PPLPQLERLYQAMRYSVMNGGKRVRPLLVYAACEALNGDKTDADGAACAVELIHAYSLVH 82
Query: 143 DDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRV---VRA 199
DDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA E A+ A +P +R
Sbjct: 83 DDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFE--AMAQAEHNPQDAALRLRM 140
Query: 200 IAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGG-GN 258
A + A G G+V G+ +D+ S G + LE +H HKT L+EA+V GA+ G +
Sbjct: 141 FAVLARAAGPAGMVGGQAIDLGSVGLKLDRDALELMHRHKTGALIEASVQLGALASGRAD 200
Query: 259 AIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKS 318
A + + YAR IGL FQV DDILDV + LGK G D+A K TYP L+G+ AK+
Sbjct: 201 ADNLASLSQYARAIGLAFQVQDDILDVESDTATLGKHQGADIARDKPTYPALLGMAAAKA 260
Query: 319 FAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+A EL QA+ L F+ + A PL LA YI R+N
Sbjct: 261 YALELRDQALHALRPFDFA-AEPLRELARYIVERRN 295
>gi|315634196|ref|ZP_07889485.1| geranyltranstransferase [Aggregatibacter segnis ATCC 33393]
gi|315477446|gb|EFU68189.1| geranyltranstransferase [Aggregatibacter segnis ATCC 33393]
Length = 296
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 127/297 (42%), Positives = 179/297 (60%), Gaps = 6/297 (2%)
Query: 62 FPFEEYMIRKAEQVNKALDE--AVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
+ F E + +++N L E A + P + AM+Y LL GGKR+RP L A+ ++G
Sbjct: 2 YQFSEDLQHVQQRINHFLAEQFAHLDSAPAPLADAMKYGLLLGGKRIRPFLVYATGRMLG 61
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
D + AA A+E IH SLIHDDLP +D+DE RR H F E+TAILAGDAL +
Sbjct: 62 ADLAQLDYAAAAIEAIHAYSLIHDDLPAMDDDELRRGHKTCHIAFDEATAILAGDALQAF 121
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A E + +I +S ++ + I + +A GV+G+ G+ +D+ SE K +SL+ELE+IH++K
Sbjct: 122 AFE-ILTDIPTLSAEQKLALIKTLSAASGVKGMCLGQSLDLISEHKVISLQELEHIHLNK 180
Query: 240 TAKLLEAAVVCGAVIGGGNAIE--VERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
T LL AA++ G + A + +++ YA IGL FQV DDILD+ SE +GKT G
Sbjct: 181 TGALLTAALMMGFICSPHFAEKALAQQLERYATAIGLAFQVQDDILDIEGDSETIGKTVG 240
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
DL + K+TYPKL+G+E AK A EL A+ EL A LY LA +I R+N
Sbjct: 241 SDLTADKSTYPKLLGLEGAKQKAQELYEMALAELKDLPFDTTA-LYALAEFIIKRKN 296
>gi|292492812|ref|YP_003528251.1| polyprenyl synthetase [Nitrosococcus halophilus Nc4]
gi|291581407|gb|ADE15864.1| Polyprenyl synthetase [Nitrosococcus halophilus Nc4]
Length = 296
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 112/286 (39%), Positives = 170/286 (59%), Gaps = 7/286 (2%)
Query: 70 RKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAA 129
R EQV D +PP ++H+AMRY++L GGKR+RPLL ++ +G E+ A
Sbjct: 17 RALEQVLPPAD-----KPPKRLHEAMRYAVLGGGKRLRPLLVYSTGMALGASEAVLDAPA 71
Query: 130 CALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIA 189
A+E+IH SL+HDDLP +DND+ RR +P H+ F E+TA+L GDAL SLA +A + +
Sbjct: 72 SAVELIHAYSLVHDDLPSMDNDDLRRGRPTCHKAFDEATALLVGDALQSLAFRILADSTS 131
Query: 190 GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVV 249
G+ ++ + + A G+ G+ +D+ S G+ ++L ELE +H KT L+ A+V+
Sbjct: 132 GLPASNQIKMLMLLAEAASSRGMAGGQAIDLESVGQLLTLAELETMHRLKTGALIRASVL 191
Query: 250 CGAVIGGG-NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYP 308
GA + +E + +A+CIGL FQ+ DD+LDV + LGK G D A K TYP
Sbjct: 192 LGAWCHPTIDPHTLENLDRFAQCIGLAFQIQDDVLDVESDTATLGKPQGSDRARDKPTYP 251
Query: 309 KLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L+G+ AK+ A LL QA + L +A L +LA+++ R++
Sbjct: 252 SLLGLPQAKAKAQSLLEQAHQALRAVDAPTEH-LEWLADFVVQRRH 296
>gi|238926867|ref|ZP_04658627.1| Farnesyltranstransferase [Selenomonas flueggei ATCC 43531]
gi|238885399|gb|EEQ49037.1| Farnesyltranstransferase [Selenomonas flueggei ATCC 43531]
Length = 291
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 115/276 (41%), Positives = 170/276 (61%), Gaps = 4/276 (1%)
Query: 79 LDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTM 138
LD VL ++ +AM YSL+AGGKR+RP+L +A+ + VG D + + ACALEMIHT
Sbjct: 20 LDRTDVLDDTLR--QAMAYSLMAGGKRLRPVLLMAAADAVGADGAKFLSVACALEMIHTY 77
Query: 139 SLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVR 198
SLIHDDLP +DND+ RR K +H+VFG+ AILAGD LL+LA V + VS D ++R
Sbjct: 78 SLIHDDLPAMDNDDYRRGKLTNHKVFGDGIAILAGDGLLTLAFT-VILRQQNVSADTLLR 136
Query: 199 AIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGN 258
+ E+ A G EG+V G+ +D+ +E +S++E+ +H+ KT L AA+ GA++GG +
Sbjct: 137 VVDEISRAAGAEGMVGGQVLDLRAEEHRISMEEMRRVHMGKTGALFRAALRSGAILGGAS 196
Query: 259 AIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKS 318
++ + YA GL FQ+ DDILDV ++E +GK G D + K+TY L ++ A+
Sbjct: 197 EAQLAALTTYAEQFGLAFQITDDILDVIGTAENIGKPVGSDEKNHKSTYVSLTSLDEAQE 256
Query: 319 FAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A + + A L F +A L L +Y+ R+
Sbjct: 257 LAAQTVKDACTALRDF-GVEADFLRELVSYLVYRKQ 291
>gi|398837497|ref|ZP_10594790.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM102]
gi|398118789|gb|EJM08515.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM102]
Length = 295
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 128/294 (43%), Positives = 185/294 (62%), Gaps = 9/294 (3%)
Query: 67 YMIRKAEQVNKALDEAVVLQPP----VKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
Y +VN AL+ + PP ++++AMRYS++ GGKRVRPLL A+CE +GG
Sbjct: 5 YSATSQARVNAALE--TLFNPPSPELARLYEAMRYSVMNGGKRVRPLLVYAACEALGGKA 62
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 63 EQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAFS 122
Query: 183 HVA-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
+ ++ + ++ ++ + A G G+V G+ +D+ S G + K LEY+H HKT
Sbjct: 123 ALLDPRLSSCDAETRLQMVSALALAAGPAGMVGGQAIDLGSVGLKLDQKALEYMHRHKTG 182
Query: 242 KLLEAAVVCGAVIGGGNAI-EVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
L+E +V GA+ G A E++ +++YA+ IGL FQV DDILDV +E LGK G D+
Sbjct: 183 ALIEVSVKLGALASGHAAKDELKSLQSYAQAIGLAFQVQDDILDVESDTETLGKRQGADI 242
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A K TYP L+G++ AK++A EL QA+ L F+A+ A PL LA YI R++
Sbjct: 243 ARDKPTYPALLGLDAAKAYALELRDQALHALRPFDAA-AEPLRDLARYIVDRRS 295
>gi|148379844|ref|YP_001254385.1| geranyltranstransferase [Clostridium botulinum A str. ATCC 3502]
gi|148289328|emb|CAL83424.1| geranyltranstransferase [Clostridium botulinum A str. ATCC 3502]
Length = 294
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 103/241 (42%), Positives = 151/241 (62%), Gaps = 1/241 (0%)
Query: 91 IHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDN 150
I++AM YSL AGGKR+RP+L + + L D AMP A A+EMIHT SLIHDDLP +DN
Sbjct: 33 IYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDN 92
Query: 151 DERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVE 210
D+ RR KP +H++FGE+ AILAGDALL+ A+ ++ + + ++ + A + A GV+
Sbjct: 93 DDLRRGKPTNHKIFGEAIAILAGDALLNEAM-NIMFEYSLKNGEKALEACYAIAKAAGVD 151
Query: 211 GLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYAR 270
G++ G+ VDI SE K + L EL Y+H KT L++A+++ GA++G ++E + Y
Sbjct: 152 GMIGGQVVDILSEDKSIPLDELYYMHKKKTGALIKASILAGAILGSDTYTDIELLGEYGD 211
Query: 271 CIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEE 330
+GL FQ+ DDILDV + LGK D + K T+ K+ GIE E+ + +
Sbjct: 212 NLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIEKCNELCTEMTNKCFDI 271
Query: 331 L 331
L
Sbjct: 272 L 272
>gi|237797521|ref|ZP_04585982.1| geranyltranstransferase [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331020371|gb|EGI00428.1| geranyltranstransferase [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 295
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 125/294 (42%), Positives = 181/294 (61%), Gaps = 9/294 (3%)
Query: 67 YMIRKAEQVNKALDEAVVLQPP----VKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
Y +VN AL+ + Q P +++ AMRYS++ GGKRVRPLL A+CE +GG+
Sbjct: 5 YQALSQTRVNAALES--LFQAPGPELARLYDAMRYSVMNGGKRVRPLLAYAACEALGGEA 62
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 63 RDADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFT 122
Query: 183 H-VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
+A ++ + ++ ++ + +A G G+V G+ +D+ S G + LEY+H HKT
Sbjct: 123 ALLAPHLTSRDAETRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTG 182
Query: 242 KLLEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
L+EA+V GA+ G + ++ ++ YAR +GL FQV DDILDV + LGK G D+
Sbjct: 183 ALIEASVRLGALASGQADQPRLDSLQVYARAVGLAFQVQDDILDVESDTATLGKRQGADI 242
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A K TYP L+G++ AKS+A EL A++ L F A PL LA YI R++
Sbjct: 243 ARDKPTYPALLGLDAAKSYALELRDMALDALNPF-GPAAEPLRDLARYIVERRH 295
>gi|389577131|ref|ZP_10167159.1| geranylgeranyl pyrophosphate synthase [Eubacterium cellulosolvens
6]
gi|389312616|gb|EIM57549.1| geranylgeranyl pyrophosphate synthase [Eubacterium cellulosolvens
6]
Length = 298
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 119/280 (42%), Positives = 166/280 (59%), Gaps = 11/280 (3%)
Query: 65 EEYMIRKAEQ---VNKAL-DEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
EE+ RKAE V + L DE V P K+ +AM YS+LAGGKR+RP+L + S + GG
Sbjct: 5 EEFQKRKAEAEEIVCRYLPDEKEV---PGKLTEAMNYSMLAGGKRIRPVLMLESYRMCGG 61
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
D + P A+EMIHT SL+HDDLP +D+DE RR K +H FG + +LAGDALL+ A
Sbjct: 62 DAAVVEPFMAAIEMIHTHSLVHDDLPAIDDDEFRRGKKTTHAAFGAALGVLAGDALLNYA 121
Query: 181 LEHVAVNIAGVS-PDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDV---SLKELEYIH 236
E P +V RA+ + G+ G++ G+ VD+ +E V K ++YI+
Sbjct: 122 YETAMTAFDCCQDPAKVARALRVLAQKTGIGGMLGGQSVDVENEKNGVFQLERKTIDYIY 181
Query: 237 VHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTA 296
V+KTA LLEA ++ GA++ G + V ++ GL FQ+ DD+LDVT + EELGK
Sbjct: 182 VNKTAALLEAPLMIGAILAGADEKTVSAMQEIGHRAGLAFQIADDVLDVTSTLEELGKPI 241
Query: 297 GKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEA 336
G D + K TY LMG+E A+ A L +A+E LA +
Sbjct: 242 GSDEKNNKTTYVTLMGVEGAREEAERLTREAVELLASMDG 281
>gi|389571717|ref|ZP_10161806.1| geranyltranstransferase [Bacillus sp. M 2-6]
gi|388428611|gb|EIL86407.1| geranyltranstransferase [Bacillus sp. M 2-6]
Length = 296
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/271 (43%), Positives = 173/271 (63%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
L P ++ +M YSL AGGKR+RP+L +A G E +P CA+EMIHT SLIHDD
Sbjct: 27 LSIPEELKSSMLYSLKAGGKRLRPVLVLALLNAYGKREEDGIPVGCAVEMIHTYSLIHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSP-DRVVRAIAEM 203
LP +D+D+ RR KP +H+V+GE+TA+LAGDALL+ + + ++ P D+ +R I E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKVYGEATAVLAGDALLTESFRLITSQLSDDVPADQKLRIIDEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
++ G G+V G+F D+ +E K + L ELE IH KT KLL +VV GA++ G E+E
Sbjct: 147 VTSAGALGMVGGQFDDMEAEQKQIPLSELESIHARKTGKLLTFSVVAGAILAGAPDDEIE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++R ++ IG+ FQ+ DDILD+ S E++GK G D A+ K+TYP L+ + AK E
Sbjct: 207 KLREFSYHIGIAFQIRDDILDLEGSEEKIGKRIGSDTANEKSTYPSLLTLSGAKEKLDEH 266
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A E ++ E + L+ L + IASR +
Sbjct: 267 ITRAKEIVSNLELEQNL-LHDLCDLIASRDH 296
>gi|416051604|ref|ZP_11577652.1| polyprenyl synthetase [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
gi|347993037|gb|EGY34414.1| polyprenyl synthetase [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
Length = 296
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 125/297 (42%), Positives = 181/297 (60%), Gaps = 6/297 (2%)
Query: 62 FPFEEYMIRKAEQVNKALDE--AVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
+ F + + +++N+ L + A + P + +AM+Y LL GGKR+RP L A+ +++G
Sbjct: 2 YQFSQDLQYVQQRINQFLADQFAYIDSAPAPLAEAMKYGLLLGGKRIRPFLVYATGKMLG 61
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
D + AA A+E IH SLIHDDLP +D+DE RR H F E+TAILAGDAL +L
Sbjct: 62 ADMAQLDYAAAAIEAIHAYSLIHDDLPAMDDDELRRGHQTCHIAFDEATAILAGDALQTL 121
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A E + +I +S ++ + I + +A GV+G+ G+ +D+ SE K +SL+ELE IH++K
Sbjct: 122 AFE-ILTDIPHLSAEQKLMLIKTLSAAAGVKGMCLGQSLDLISEQKIISLQELEQIHLNK 180
Query: 240 TAKLLEAAVVCGAVIGG--GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
T LL AA+ G + + +++ YA IGL FQV DDILD+ S LGKTAG
Sbjct: 181 TGALLAAALKMGFICSPHFADTALAQQLERYATAIGLAFQVQDDILDIEGDSATLGKTAG 240
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
DL + K+TYPKL+G+E AK A EL A+ EL + A LY LA +I R++
Sbjct: 241 SDLTADKSTYPKLLGLEGAKQKAQELYQTALAELKNLPFNTTA-LYALAEFIVKRKS 296
>gi|293610957|ref|ZP_06693256.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|427423702|ref|ZP_18913843.1| polyprenyl synthetase [Acinetobacter baumannii WC-136]
gi|292826609|gb|EFF84975.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|425699362|gb|EKU68977.1| polyprenyl synthetase [Acinetobacter baumannii WC-136]
Length = 303
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 118/272 (43%), Positives = 165/272 (60%), Gaps = 6/272 (2%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG-DESWAMPAACALEMIHTMSLIHDDLP 146
P + A+ ++++ GGKRVRP LC A+ L + + A AA A+E+IH SL HDDLP
Sbjct: 33 PEPLKSAVHHAVMLGGKRVRPALCYATASLQPNPNFAAARRAAVAVELIHCYSLAHDDLP 92
Query: 147 FLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNI---AGVSPDRVVRAIAEM 203
+DND RR +P H FGE TA+LAGD L S+A E + + G D +
Sbjct: 93 CMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQMQ 152
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAV-IGGGNAIEV 262
A +V+G+ +D+ +EGK ++ ELE IH +KT L++AA++ GAV I G +
Sbjct: 153 ILATASSKMVSGQVLDLQAEGKKITQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQAI 212
Query: 263 ERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGE 322
++R Y + IGL FQV+DDILD+T S+E LGKTAGKD K+TYP LMG+E AK +A E
Sbjct: 213 PKLRQYGQTIGLAFQVLDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAKVYAKE 272
Query: 323 LLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L QA E LA+F A L ++ ++ +R N
Sbjct: 273 LHDQAFEALAHF-GDDAKELVDISQFLLARTN 303
>gi|317122006|ref|YP_004102009.1| farnesyl-diphosphate synthase [Thermaerobacter marianensis DSM
12885]
gi|315591986|gb|ADU51282.1| farnesyl-diphosphate synthase [Thermaerobacter marianensis DSM
12885]
Length = 308
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 122/273 (44%), Positives = 161/273 (58%), Gaps = 6/273 (2%)
Query: 87 PPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES---WAMPAACALEMIHTMSLIHD 143
PP +IH+AMRYS LAGGK +RP+L +A+ VGG E+ AA A+E++HT SLIHD
Sbjct: 37 PPARIHEAMRYSALAGGKLLRPVLVMAAARCVGGPEAVTPAVRRAAAAVELVHTYSLIHD 96
Query: 144 DLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVA-VNIAGVSPDRVVRAIAE 202
DLP +D+D RR +PA+H VFGE+ AILAGDALL+LA E +A + G P + E
Sbjct: 97 DLPAMDDDAMRRGQPANHVVFGEAMAILAGDALLTLAFEVLAGLPRWGADPAVALAVAEE 156
Query: 203 MCSAMGVEGLVAGEFVDI-ASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIE 261
+ A G GL+ G+ D+ A +G + L L+ IH KT L A V GA + G E
Sbjct: 157 LARAAGTAGLIGGQVDDLDAVQGAPLDLARLQSIHRRKTGALFRACVRMGARLAGAGEGE 216
Query: 262 VERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAG 321
+E + YA G FQ+VDDILDVT ELGK G D GK T P L+G+E A+ A
Sbjct: 217 LEALTAYATAFGEAFQIVDDILDVTGDEAELGKPVGSDARRGKVTVPGLVGLERARRLAA 276
Query: 322 ELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
E +A+ L +AA L +LA + R+
Sbjct: 277 EATERAVASLDPL-GDRAALLAWLARSLLERRR 308
>gi|89148075|gb|ABC46867.3| geranylgeranyl diphosphate synthase [Stevia rebaudiana]
Length = 147
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 93/147 (63%), Positives = 117/147 (79%)
Query: 134 MIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSP 193
MIHTMSL+HDDLP +DND+ RR KP SH+V+GE A+L GDALLSL+ EH+A GVS
Sbjct: 1 MIHTMSLVHDDLPCVDNDDFRRGKPTSHKVYGEEMAVLTGDALLSLSFEHIATATKGVSK 60
Query: 194 DRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAV 253
DR+VR I E+ ++G EGLVAG+ VDI SEG DV L LEYIH+HKTA LLE++VV GA+
Sbjct: 61 DRIVRVIGELARSVGSEGLVAGQVVDILSEGADVGLDHLEYIHIHKTAMLLESSVVIGAI 120
Query: 254 IGGGNAIEVERVRNYARCIGLLFQVVD 280
+GGG+ ++E++R +AR IGLLFQVVD
Sbjct: 121 MGGGSDQQIEKLRKFARSIGLLFQVVD 147
>gi|410657101|ref|YP_006909472.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Dehalobacter
sp. DCA]
gi|410660137|ref|YP_006912508.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Dehalobacter
sp. CF]
gi|409019456|gb|AFV01487.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Dehalobacter
sp. DCA]
gi|409022493|gb|AFV04523.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Dehalobacter
sp. CF]
Length = 288
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 121/264 (45%), Positives = 173/264 (65%), Gaps = 2/264 (0%)
Query: 91 IHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDN 150
+ ++M YSL+ GGKR+RP+L +A ELVGG + A A+E+IHT SLIHDDLP +D+
Sbjct: 27 LGRSMNYSLVGGGKRIRPVLALACAELVGGRPEELVSEAAAIELIHTYSLIHDDLPAMDD 86
Query: 151 DERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVE 210
D+ RR K ++H+VFGE+ AILAGDALL+LA E +A + + + +R I E A G +
Sbjct: 87 DDYRRGKLSNHKVFGEAGAILAGDALLTLAFELLA-GPSAIEAQKKLRVIRETAQAAGWQ 145
Query: 211 GLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYAR 270
G+V G+ +D ++ +L ++E +H KT LL+A+ GA++GGG+ E+E + +YA
Sbjct: 146 GMVGGQSLDTLGNLENSTLADIEQVHHLKTGALLKASARLGAILGGGSEPEIEILTSYAL 205
Query: 271 CIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEE 330
+GL FQ+ DDILDV S +GK+AGKD SGK TYP L+G+E A+ + + A E
Sbjct: 206 YLGLAFQIKDDILDVVGESAVIGKSAGKDQKSGKPTYPSLLGLEGAREQLEKTIFLAKES 265
Query: 331 LAYFEASKAAPLYFLANYIASRQN 354
L+ F KAA L LA+Y A R N
Sbjct: 266 LSCF-GPKAAFLLSLADYTAERTN 288
>gi|153937414|ref|YP_001387682.1| geranyltranstransferase [Clostridium botulinum A str. Hall]
gi|152933328|gb|ABS38827.1| putative geranyltranstransferase [Clostridium botulinum A str.
Hall]
Length = 290
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 103/241 (42%), Positives = 151/241 (62%), Gaps = 1/241 (0%)
Query: 91 IHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDN 150
I++AM YSL AGGKR+RP+L + + L D AMP A A+EMIHT SLIHDDLP +DN
Sbjct: 29 IYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDN 88
Query: 151 DERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVE 210
D+ RR KP +H++FGE+ AILAGDALL+ A+ ++ + + ++ + A + A GV+
Sbjct: 89 DDLRRGKPTNHKIFGEAIAILAGDALLNEAM-NIMFEYSLKNGEKALEACYAIAKAAGVD 147
Query: 211 GLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYAR 270
G++ G+ VDI SE K + L EL Y+H KT L++A+++ GA++G ++E + Y
Sbjct: 148 GMIGGQVVDILSEDKSIPLDELYYMHKKKTGALIKASILAGAILGSDTYTDIELLGEYGD 207
Query: 271 CIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEE 330
+GL FQ+ DDILDV + LGK D + K T+ K+ GIE E+ + +
Sbjct: 208 NLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIEKCNELCTEMTNKCFDI 267
Query: 331 L 331
L
Sbjct: 268 L 268
>gi|429331879|ref|ZP_19212619.1| polyprenyl synthetase [Pseudomonas putida CSV86]
gi|428763390|gb|EKX85565.1| polyprenyl synthetase [Pseudomonas putida CSV86]
Length = 295
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 185/297 (62%), Gaps = 12/297 (4%)
Query: 68 MIRKAEQVNKA-LDEAV--VLQPP----VKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
MIR + +A +D A+ + Q P ++++AMRYS++ GGKRVRPLL A+CE +GG
Sbjct: 1 MIRAYQTACQARVDAALEPLFQAPSVELTRLYEAMRYSVMNGGKRVRPLLAYAACEALGG 60
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 61 TAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLA 120
Query: 181 LEHVAVNIAGVSPDRVVRAIAE-MCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
+ D A+ + + A G G+V G+ +D+ S G + LE++H HK
Sbjct: 121 FSALLDPRLSSQSDATRLAMVQTLAKAAGPAGMVGGQAIDLGSVGLKLDQAALEFMHRHK 180
Query: 240 TAKLLEAAVVCGAVIG--GGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
T L+EA+V GA+ G+A E++ ++ YA+ IGL FQV DDILDV + LGK G
Sbjct: 181 TGALIEASVRLGALASERAGDA-ELKALQQYAQAIGLAFQVQDDILDVESDTATLGKRQG 239
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
D+A K TYP L+G++ AK++A EL QAI+ + F+A+ A PL LA YI R+N
Sbjct: 240 ADIARDKPTYPALLGLDAAKAYALELRDQAIDAVRPFDAA-AEPLRALARYIVERRN 295
>gi|375108094|ref|ZP_09754355.1| geranylgeranyl pyrophosphate synthase [Burkholderiales bacterium
JOSHI_001]
gi|374668825|gb|EHR73610.1| geranylgeranyl pyrophosphate synthase [Burkholderiales bacterium
JOSHI_001]
Length = 296
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 122/291 (41%), Positives = 171/291 (58%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
F+ + ++ V AL+ V P + AMRY +L GGKR+RPLL +A+CE V GD +
Sbjct: 6 FDVWSRQRLADVEGALERWVPEDTPAGLGVAMRYGVLDGGKRLRPLLVMAACEAVHGDPA 65
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
A+ AA A+E+IH SL+HDD+P +DND RR KP H FGE+ A+LAGDA+ +LA E
Sbjct: 66 AALRAAVAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVKFGEAQAMLAGDAMQALAFEV 125
Query: 184 VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
+ + + P R A + A G G+ G+ +D+AS GK + L +H KT L
Sbjct: 126 LTPDDGAMPPAMQARLCALLARAAGHSGMAGGQAIDLASIGKALDEGALRDMHRRKTGAL 185
Query: 244 LEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASG 303
L+A+V+ GA G +A + + +Y +GL FQVVDDILDVT+ S LGKTAGKD +
Sbjct: 186 LQASVLMGAACGPVDAPAWKALSDYGAALGLAFQVVDDILDVTQESVTLGKTAGKDQDAN 245
Query: 304 KATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TY ++G+E A++ A L QA LA A L LA+ + R +
Sbjct: 246 KPTYVSVLGLERARAQAHALREQAQAALAASGLPGCAHLAVLADRVVDRDS 296
>gi|294651287|ref|ZP_06728611.1| geranyltranstransferase [Acinetobacter haemolyticus ATCC 19194]
gi|292822816|gb|EFF81695.1| geranyltranstransferase [Acinetobacter haemolyticus ATCC 19194]
Length = 303
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/272 (43%), Positives = 166/272 (61%), Gaps = 6/272 (2%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE-SWAMPAACALEMIHTMSLIHDDLP 146
P + A+ ++++ GGKRVRP LC A+ L + AA A+E+IH SL HDDLP
Sbjct: 33 PEPLKAAVHHAVMLGGKRVRPALCYATASLKPNHNFAAVRRAAVAVELIHCYSLAHDDLP 92
Query: 147 FLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNI---AGVSPDRVVRAIAEM 203
+DND RR +P H VFGE TA+LAGD L S+A E +A + G D +
Sbjct: 93 CMDNDLLRRGQPTCHVVFGEDTALLAGDILQSMAFEILASRLFDEQGQGTDAAIVLKQVQ 152
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAV-IGGGNAIEV 262
A +VAG+ +D+ +EGK V ELE IH +KT L++AA++ GAV + G +
Sbjct: 153 ILATASSKMVAGQVLDLQAEGKQVDQTELENIHRNKTGALIQAAIMMGAVTVFAGTDPAI 212
Query: 263 ERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGE 322
++R + + IGL FQV DDILD+T S+E LGKTAGKD K+TYP LMG+E AK++A
Sbjct: 213 PKLRQFGQTIGLAFQVQDDILDITASTETLGKTAGKDEQVQKSTYPALMGLEQAKTYAQT 272
Query: 323 LLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L QA + LAYF +A L +++++ +R++
Sbjct: 273 LHDQAFDALAYF-GDQAQELTAISHFLLARKS 303
>gi|307726551|ref|YP_003909764.1| polyprenyl synthetase [Burkholderia sp. CCGE1003]
gi|307587076|gb|ADN60473.1| Polyprenyl synthetase [Burkholderia sp. CCGE1003]
Length = 293
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 123/294 (41%), Positives = 175/294 (59%), Gaps = 6/294 (2%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
FE++ E+V AL+ + + P K+H+AMRY++L GGKRVRPLLC A+ EL G
Sbjct: 1 MTFEQWTRGVLERVEAALEHYLPAESTEPAKLHEAMRYAVLGGGKRVRPLLCHAAGELTG 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
AA ALEMIH SL+HDD+P +D+D RR KP H + E+TA+L GDAL S
Sbjct: 61 ARAECLDAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQ 120
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A + ++ ++P + + E+ A G G+ G+ +D+AS G ++ +LE +H K
Sbjct: 121 AFVSLTSDV--LAPAQQAALVRELALASGSVGMCGGQAIDLASVGHTLTRAQLETMHRMK 178
Query: 240 TAKLLEAAVVCGAVIGGG-NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
T LL AAV GA+ G +A + + Y+ +GL FQVVDDILDVT S LGKTAGK
Sbjct: 179 TGALLRAAVRMGALAGEAPDANAMRSLDAYSAAVGLAFQVVDDILDVTTDSATLGKTAGK 238
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
D GK TY ++G++ +++ A +L A LA F A +A L LA+ + +R
Sbjct: 239 DAKDGKPTYVSIIGLDASRALAAQLRSDAHAALAPFGA-RAQRLAELADLVVNR 291
>gi|163857373|ref|YP_001631671.1| geranyltranstransferase [Bordetella petrii DSM 12804]
gi|163261101|emb|CAP43403.1| probable geranyltranstransferase [Bordetella petrii]
Length = 303
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 118/299 (39%), Positives = 175/299 (58%), Gaps = 11/299 (3%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIAS---CE 116
F +++ +A+ + LDE + P ++H+AMRY++L GGKR+R L A+ C
Sbjct: 6 LAFADWLQGRAQHIEAVLDECLPAADALPARLHEAMRYAVLGGGKRIRAALVYAAGQACP 65
Query: 117 LVGGD---ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAG 173
+ G ++ AA A+E+IH SLIHDDLP +D+D RR +P +H F E+TA+LAG
Sbjct: 66 VNGSAVAIQASMDRAAAAVELIHAYSLIHDDLPCMDDDTLRRGRPTTHVQFDEATAMLAG 125
Query: 174 DALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELE 233
DAL LA E +A ++P VV+A + A G G+ G+ +D+ S G+ +S EL+
Sbjct: 126 DALQPLAFELLADMP--IAPALVVQATQALARAAGSLGMAGGQAIDLHSVGQALSRDELQ 183
Query: 234 YIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELG 293
+H KT +L +V G ++ G ++ + + +YA+ +GL FQVVDDILDVT S LG
Sbjct: 184 TMHSMKTGAMLACSVALGGIVSGASSSTRQALDDYAQAVGLAFQVVDDILDVTADSASLG 243
Query: 294 KTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
KT GKD A K TY L+G+++A++ A EL G A L + L LA+YI R
Sbjct: 244 KTPGKDAAGNKPTYVSLLGLDDARALAEELRGAAHAALTPL-GDAGSTLARLADYIVLR 301
>gi|429211674|ref|ZP_19202839.1| geranyltranstransferase [Pseudomonas sp. M1]
gi|428156156|gb|EKX02704.1| geranyltranstransferase [Pseudomonas sp. M1]
Length = 295
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 128/294 (43%), Positives = 179/294 (60%), Gaps = 9/294 (3%)
Query: 67 YMIRKAEQVNKALDEAVVLQPP----VKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
Y R +V+ AL+ + PP ++++AMRYS++ GGKRVRPLL A+CE +GGD
Sbjct: 5 YQARCQARVDAALE--TLFTPPREDLQRLYRAMRYSVVNGGKRVRPLLAYAACEALGGDP 62
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
+ A AACA+E+IH SL+HDDLP +D+D+ RR +P +H F E+ AILAGD L +LA E
Sbjct: 63 ARADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHIAFDEACAILAGDGLQALAFE 122
Query: 183 HVA-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
+A + + + + + A G G+V G+ +D+ + G+ + LE +H HKT
Sbjct: 123 VLAEARLNPQDAETRLAMVTALARAAGSAGMVGGQAIDLEAVGRRIDQAALETMHRHKTG 182
Query: 242 KLLEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
L+EA+V GA+ G +A +E + YA IGL FQV DDILDV + LGKT GKD
Sbjct: 183 ALIEASVRLGALASGQADAERLEALARYAGAIGLAFQVQDDILDVESDTATLGKTQGKDQ 242
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A K TYP L+G+E AK++A L QA+ L F A PL LA YI R++
Sbjct: 243 AHDKPTYPALLGLEAAKTYALALRDQALAALEGF-GEGAEPLRELARYIVERRS 295
>gi|334131672|ref|ZP_08505434.1| Geranyltranstransferase [Methyloversatilis universalis FAM5]
gi|333443145|gb|EGK71110.1| Geranyltranstransferase [Methyloversatilis universalis FAM5]
Length = 305
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 123/298 (41%), Positives = 180/298 (60%), Gaps = 8/298 (2%)
Query: 61 TFPFEEYMIRKAEQVNKALD----EAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCE 116
T F +++ + ALD +A + P ++H AMRY++L GGKRVRPLLC A+
Sbjct: 12 TGSFADWVSAVQHRTESALDRFLPQATI--APARLHDAMRYAVLGGGKRVRPLLCHAAGA 69
Query: 117 LVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDAL 176
L G AACA+EMIH SL+HDD+P +D+D RR KP H + ++TA+L GD+L
Sbjct: 70 LSGASAEALDAAACAVEMIHAYSLVHDDMPCMDDDVLRRGKPTVHVQYDDATALLVGDSL 129
Query: 177 LSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIH 236
SLA +A + V D ++++ A G G+ G+ +D+AS G + ++ELE++H
Sbjct: 130 QSLAFLLLAEHCP-VPADTRAALVSQLAIASGSRGMAGGQAIDLASVGLPLGVEELEFMH 188
Query: 237 VHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTA 296
+HKT L+ AV GA G + R+ +YA +GLLFQVVDD+LD S+EELGKTA
Sbjct: 189 IHKTGALIRCAVRMGAACGHLDVDAHGRLDHYAGTVGLLFQVVDDVLDCEASTEELGKTA 248
Query: 297 GKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
GKD A+ K TY +G+ A+ A EL +AI+ L+ F A L LA+++ +R++
Sbjct: 249 GKDAAANKPTYVSTLGLARARERARELHAEAIDSLSLF-GDAARRLRELADFVLTRKH 305
>gi|226951627|ref|ZP_03822091.1| geranyltranstransferase (farnesyldiphosphate synthase)
[Acinetobacter sp. ATCC 27244]
gi|226837608|gb|EEH69991.1| geranyltranstransferase (farnesyldiphosphate synthase)
[Acinetobacter sp. ATCC 27244]
Length = 303
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 116/274 (42%), Positives = 170/274 (62%), Gaps = 10/274 (3%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE-SWAMPAACALEMIHTMSLIHDDLP 146
P + A+ ++++ GGKRVRP LC A+ L + AA A+E+IH SL HDDLP
Sbjct: 33 PEPLKAAVHHAVMLGGKRVRPALCYATASLKPNHNFAAVRRAAVAVELIHCYSLAHDDLP 92
Query: 147 FLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNI-----AGVSPDRVVRAIA 201
+DND RR +P H VFGE TA+LAGD L S+A E + + G+ V++ +
Sbjct: 93 CMDNDLLRRGQPTCHVVFGEDTALLAGDILQSMAFEILGSRLFDEQGQGIDSQIVLKQMQ 152
Query: 202 EMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAV-IGGGNAI 260
+ +A +VAG+ +D+ +EGK V ELE IH +KT L++AA++ GAV + G
Sbjct: 153 ILATA--SSKMVAGQVLDLQAEGKQVDQTELENIHRNKTGALIQAAIMMGAVTVFAGTDP 210
Query: 261 EVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFA 320
+ ++R + + IGL FQV DDILD+T S+E LGKTAGKD K+TYP LMG+E AK++A
Sbjct: 211 AIPKLRQFGQTIGLAFQVQDDILDITASTETLGKTAGKDEQVQKSTYPALMGLEQAKTYA 270
Query: 321 GELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L QA + LAYF +A L +++++ +R++
Sbjct: 271 QTLHDQAFDALAYF-GDQAQELTAISHFLLARKS 303
>gi|71274508|ref|ZP_00650796.1| Polyprenyl synthetase [Xylella fastidiosa Dixon]
gi|71164240|gb|EAO13954.1| Polyprenyl synthetase [Xylella fastidiosa Dixon]
gi|71729912|gb|EAO32008.1| Polyprenyl synthetase [Xylella fastidiosa Ann-1]
Length = 291
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 116/291 (39%), Positives = 169/291 (58%), Gaps = 5/291 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
F + R + + L +++ Q P ++H AMRY++L+GGKR+RPLL A+ L DE
Sbjct: 6 FTRWCQRTDSYLERTL--SILTQAPQRLHAAMRYTVLSGGKRIRPLLVYAAGHLFHVDEP 63
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
A A+E+IH SL+HDDLP +D+D RR +P H F E+TAIL GDAL +LA E
Sbjct: 64 LLDVPAAAVELIHAYSLVHDDLPAMDDDLLRRGRPTVHIAFDEATAILTGDALQTLAFEC 123
Query: 184 VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
+A A S + + + A GV G+ G+ +DI + G+ +LK LE +H K+ L
Sbjct: 124 LADAPADAS--LRIAWLQTLTHAAGVAGMCGGQALDIDATGQSQTLKALEAMHALKSGTL 181
Query: 244 LEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASG 303
+ AAV GA+ G + ++ + +A +GL FQV DDILD+ SSE+LGKT GKD
Sbjct: 182 MRAAVRMGALAGDPSPEDLHSLDTFAATLGLAFQVRDDILDIESSSEQLGKTTGKDAIQQ 241
Query: 304 KATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K+T+P L+ +E AK + EL + +L + +AAPL LA R +
Sbjct: 242 KSTFPALLSVEGAKCYLQELAERLYTQLHPY-GERAAPLTALARLAVERAH 291
>gi|15837263|ref|NP_297951.1| geranyltranstransferase [Xylella fastidiosa 9a5c]
gi|9105539|gb|AAF83471.1|AE003910_7 geranyltranstransferase (farnesyl-diphosphate synthase) [Xylella
fastidiosa 9a5c]
Length = 291
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 117/293 (39%), Positives = 169/293 (57%), Gaps = 9/293 (3%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
F + R + + L ++ Q P ++H AMRY++L+ GKR+RPLL A+ L DE
Sbjct: 6 FTRWRQRTDSYLERTL--SIPTQAPQRLHAAMRYTVLSRGKRIRPLLVYAAGHLFHVDEP 63
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
A A+E+IH SL+HDDLP +D+D RR +P H F E+TAIL GDAL +LA E
Sbjct: 64 LLDVPAAAVELIHAYSLVHDDLPAMDDDLLRRGRPTVHIAFDEATAILTGDALQTLAFE- 122
Query: 184 VAVNIAGVSPDRVVR--AIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
+A D +R + + A GV G+ G+ +DI + G+ +LK LE +H K+
Sbjct: 123 ---CLADAPSDTSLRIAWLQTLTHAAGVAGMCGGQAIDIDATGQSQTLKALEAMHALKSG 179
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
L+ AAV GA+ G +A ++ + +A +GL FQV DDILD+ SSE+LGKTAGKD
Sbjct: 180 TLMRAAVRMGALAGDPSAEDLHSLDTFAATLGLAFQVRDDILDIESSSEQLGKTAGKDAI 239
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K+T+P L+ +E AK + EL + +L + +AAPL LA R +
Sbjct: 240 QQKSTFPALLSVEGAKCYLQELAERLYTQLHPY-GERAAPLTALARLAVERAH 291
>gi|398852079|ref|ZP_10608748.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM80]
gi|398244955|gb|EJN30487.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM80]
Length = 295
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 126/294 (42%), Positives = 180/294 (61%), Gaps = 9/294 (3%)
Query: 67 YMIRKAEQVNKALDEAVVLQPPV----KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
Y +VN AL+ + P+ ++++AMRYS++ GGKRVRPLL A+CE +GG
Sbjct: 5 YTATSQGRVNAALE--TLFNAPLPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGKA 62
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 63 EQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAFS 122
Query: 183 HVA-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
+ ++ S D ++ + + A G G+V G+ +D+ S G + K LE +H HKT
Sbjct: 123 ALLDPRLSDCSSDIRLQMVTALAQAAGPAGMVGGQAIDLGSVGLKLDQKALEQMHRHKTG 182
Query: 242 KLLEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
L+E +V GA+ G E+ ++ YA+ IGL FQV DDILDV + LGK G D+
Sbjct: 183 ALIEVSVKLGALASGRAEPDELRALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADI 242
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A K TYP L+G++ AK++A EL QA+ L F+A+ A PL LA YI R++
Sbjct: 243 ARDKPTYPALLGLDAAKAYALELRDQALHALRPFDAA-AEPLRELARYIVERRS 295
>gi|424925133|ref|ZP_18348494.1| Geranylgeranyl pyrophosphate synthase [Pseudomonas fluorescens
R124]
gi|404306293|gb|EJZ60255.1| Geranylgeranyl pyrophosphate synthase [Pseudomonas fluorescens
R124]
Length = 295
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 124/294 (42%), Positives = 182/294 (61%), Gaps = 9/294 (3%)
Query: 67 YMIRKAEQVNKALDEAVVLQPPV----KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
Y +VN AL+ ++ + P+ ++++AM YS++ GGKRVRPLL A+CE +GG
Sbjct: 5 YSATSQARVNAALE--ILFKAPLPELSRLYEAMHYSVMIGGKRVRPLLAYAACEALGGKA 62
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 63 EQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAFS 122
Query: 183 HVA-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
+ ++ + D ++ + + A G G+V G+ +D+ S G + + LE +H HKT
Sbjct: 123 ALLDPRLSSLDADIRLQQVTALAHAAGPAGMVGGQAIDLGSVGLKLDQQALEQMHRHKTG 182
Query: 242 KLLEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
L+E +V GA+ G +++ ++ YA+ IGL FQV DDILDV +E LGK G D+
Sbjct: 183 ALIEVSVKLGALASGRAEQDQLKALQTYAQAIGLAFQVQDDILDVESDTETLGKRQGADI 242
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A K TYP L+G++ AK +A EL QA+ L F+A+ A PL LA YI R+N
Sbjct: 243 ARDKPTYPALLGLDAAKVYALELRDQALHALRPFDAA-AEPLRDLARYIVERRN 295
>gi|257095634|ref|YP_003169275.1| polyprenyl synthetase [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
gi|257048158|gb|ACV37346.1| Polyprenyl synthetase [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
Length = 307
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 123/295 (41%), Positives = 174/295 (58%), Gaps = 9/295 (3%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQP----PVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
F ++M Q+ AL A L P P ++H+AMRY+ L GGKRVRPLL A+ +L
Sbjct: 16 FADWMRGVQAQLEAAL--ARNLPPGEAIPGRLHQAMRYASLDGGKRVRPLLVFAAGDLTD 73
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
AA A+E+IH+ SL+HDDLP +D+D RR +P H + E+TA+L GD+L SL
Sbjct: 74 AARERLELAASAVELIHSYSLVHDDLPCMDDDVLRRGRPTCHVEYDEATALLVGDSLQSL 133
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A E +A G R + + + A G G+ G+ +D+ S GK ++ ELE +H K
Sbjct: 134 AFELLAREDFGDGA-RQLEMVRLLARASGSCGMAGGQSIDLESVGKTLNQPELELMHALK 192
Query: 240 TAKLLEAAVVCGAVIGGG-NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
T L+ AAV+ GA+ G + E E + +A+ GLLFQVVDDILD T S+ LGKTAGK
Sbjct: 193 TGALIRAAVILGALCGTPLSTTEREALDRFAKRAGLLFQVVDDILDCTASTATLGKTAGK 252
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
D A+ K TY L+G+E A+ A +L QA++ L F ++ L L ++I R+
Sbjct: 253 DAATEKPTYVSLLGLERARELAADLRAQALQALNLF-GERSQRLVELTDFITRRK 306
>gi|416995849|ref|ZP_11939108.1| farnesyl-diphosphate synthase [Burkholderia sp. TJI49]
gi|325518120|gb|EGC97906.1| farnesyl-diphosphate synthase [Burkholderia sp. TJI49]
Length = 294
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 128/297 (43%), Positives = 179/297 (60%), Gaps = 11/297 (3%)
Query: 62 FPFEEYMIRKAEQVNKALD-----EAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCE 116
FE++M ++V AL E VV P ++H+AMRY++L GGKRVRPLLC A+ E
Sbjct: 1 MTFEQWMRSVLDRVEDALGHYLPAENVV---PTQLHEAMRYAVLGGGKRVRPLLCHAAGE 57
Query: 117 LVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDAL 176
L G E+ AA ALEMIH SL+HDD+P +D+D RR KP H + E TA+L GDAL
Sbjct: 58 LTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDAL 117
Query: 177 LSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIH 236
S A + + A +SP + + E+ A G G+ G+ +D+AS G ++ ++LE +H
Sbjct: 118 QSQAFVAL-TDAAALSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMH 176
Query: 237 VHKTAKLLEAAVVCGAVIGGG-NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKT 295
KT LL AAV GA+ G +A + + YA +GL FQVVDDILDVT S LGKT
Sbjct: 177 RMKTGALLRAAVRMGALAGDTPSADAMAALDVYAGAVGLAFQVVDDILDVTTDSATLGKT 236
Query: 296 AGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
AGKD A+ K TY ++G++ ++ A +L +A + L F A +A L LA+ + +R
Sbjct: 237 AGKDAANDKPTYVSILGLDASRELAAQLRTEAHDALKPFGA-RAQRLAELADLVVNR 292
>gi|168186200|ref|ZP_02620835.1| geranyltranstransferase [Clostridium botulinum C str. Eklund]
gi|169295787|gb|EDS77920.1| geranyltranstransferase [Clostridium botulinum C str. Eklund]
Length = 289
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 103/263 (39%), Positives = 160/263 (60%), Gaps = 2/263 (0%)
Query: 91 IHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDN 150
++ AM+YS+ GGKR+RP+L + + + + MP ACA+EMIHT SLIHDDLP +DN
Sbjct: 28 VYDAMKYSVEVGGKRIRPILMLCTYSVYKDNYKEIMPMACAIEMIHTYSLIHDDLPAMDN 87
Query: 151 DERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVE 210
D+ RR KP +H+VFGE+ AILAGD LL+ A+ ++ N + + + ++A + A GVE
Sbjct: 88 DDLRRGKPTNHKVFGEAMAILAGDGLLNEAM-NIMFNYSLNNDIKALKASKIISEAAGVE 146
Query: 211 GLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYAR 270
G++ G+ VDI SEGK +S+ L Y+H +KT KL++++++ GA++G +V + +
Sbjct: 147 GMIGGQVVDIISEGKKISIDNLRYMHKNKTGKLIKSSIIAGAILGDAPNEDVNILDEFGE 206
Query: 271 CIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEE 330
+GL FQ+ DDILDV + LGK KD + K T+ G+E K L + ++
Sbjct: 207 KLGLAFQIKDDILDVIGDEKILGKEVHKDKENNKTTFISEFGLEGCKEMCVNLTEECLKL 266
Query: 331 LAYFEASKAAPLYFLANYIASRQ 353
L + S L + ++ RQ
Sbjct: 267 LKQIK-SNTGELENITEFLMKRQ 288
>gi|449134072|ref|ZP_21769577.1| geranylgeranyl diphosphate synthase [Rhodopirellula europaea 6C]
gi|448887251|gb|EMB17635.1| geranylgeranyl diphosphate synthase [Rhodopirellula europaea 6C]
Length = 315
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 126/305 (41%), Positives = 175/305 (57%), Gaps = 13/305 (4%)
Query: 60 PTFPFEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCEL 117
P ++YM + V AL A +P P ++ A+RY++LA GKR+RP+L I + E
Sbjct: 14 PNESLKDYMDARRPAVEAALQAACEDRPGVPERLAAAIRYAVLAPGKRLRPMLTIMAAEA 73
Query: 118 VGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALL 177
GGD AMP+A A+EMIH SLIHDDLP +D+D+ RR +P +H F E+TAILAGDAL
Sbjct: 74 CGGDMESAMPSAVAVEMIHAYSLIHDDLPAMDDDDLRRGRPTTHIEFDEATAILAGDALQ 133
Query: 178 SLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASE--------GKDVSL 229
S+A H+ + + + + I + +A G GLV G+ D+ +E G D +L
Sbjct: 134 SMAFAHLHQSTSDTTKSAAL--IGTLATAAGPAGLVGGQADDLDAEKHTLEDFGGADAAL 191
Query: 230 KELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSS 289
K LE IH KT L A GA+ G + V + +YA+ GL FQ+ DD+LD T +
Sbjct: 192 KHLEAIHHRKTGALFTACAAMGAISAGADTNAVSALTDYAKAFGLAFQITDDLLDCTSTD 251
Query: 290 EELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYI 349
E+LGK GKD GK TYP LMG++ A++ A + A E L F S A L LA+++
Sbjct: 252 EQLGKRTGKDDGRGKLTYPGLMGLDRARAHAESTIHMAHESLQLF-GSSAQRLKKLADFV 310
Query: 350 ASRQN 354
R N
Sbjct: 311 LERTN 315
>gi|161521357|ref|YP_001584784.1| polyprenyl synthetase [Burkholderia multivorans ATCC 17616]
gi|189352476|ref|YP_001948103.1| geranyltranstransferase [Burkholderia multivorans ATCC 17616]
gi|221197059|ref|ZP_03570106.1| geranyltranstransferase [Burkholderia multivorans CGD2M]
gi|221203731|ref|ZP_03576749.1| geranyltranstransferase [Burkholderia multivorans CGD2]
gi|221212347|ref|ZP_03585324.1| geranyltranstransferase [Burkholderia multivorans CGD1]
gi|421468332|ref|ZP_15916884.1| polyprenyl synthetase [Burkholderia multivorans ATCC BAA-247]
gi|160345407|gb|ABX18492.1| Polyprenyl synthetase [Burkholderia multivorans ATCC 17616]
gi|189336498|dbj|BAG45567.1| geranyltranstransferase [Burkholderia multivorans ATCC 17616]
gi|221167446|gb|EED99915.1| geranyltranstransferase [Burkholderia multivorans CGD1]
gi|221175897|gb|EEE08326.1| geranyltranstransferase [Burkholderia multivorans CGD2]
gi|221183613|gb|EEE16013.1| geranyltranstransferase [Burkholderia multivorans CGD2M]
gi|400232187|gb|EJO61823.1| polyprenyl synthetase [Burkholderia multivorans ATCC BAA-247]
Length = 294
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 127/297 (42%), Positives = 179/297 (60%), Gaps = 11/297 (3%)
Query: 62 FPFEEYMIRKAEQVNKALD-----EAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCE 116
FE++M ++V AL + VV P ++H+AMRY++L GGKRVRPLLC A+ E
Sbjct: 1 MTFEQWMRSVLDRVEDALGHYLPADTVV---PARLHEAMRYAVLGGGKRVRPLLCHAAGE 57
Query: 117 LVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDAL 176
L G E+ AA ALEMIH SL+HDD+P +D+D RR KP H + E TA+L GDAL
Sbjct: 58 LTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDAL 117
Query: 177 LSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIH 236
S A + + A +SP + + E+ A G G+ G+ +D+AS G ++ ++LE +H
Sbjct: 118 QSQAFVAL-TDAAALSPVQQAALVRELALASGSLGMAGGQAIDLASVGIKLTREQLETMH 176
Query: 237 VHKTAKLLEAAVVCGAVIGGG-NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKT 295
KT LL AAV GA+ G +A + + YA +GL FQVVDDILDVT S LGKT
Sbjct: 177 RMKTGALLRAAVRMGALAGETPSADTMAALDVYAGAVGLAFQVVDDILDVTTDSATLGKT 236
Query: 296 AGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
AGKD A+ K TY ++G++ ++ A +L +A + L F A +A L LA+ + +R
Sbjct: 237 AGKDAANDKPTYVSILGLDASRELAAQLRAEAHDALKPFGA-RAQRLAELADLVVNR 292
>gi|26987266|ref|NP_742691.1| polyprenyl synthetase [Pseudomonas putida KT2440]
gi|24981909|gb|AAN66155.1|AE016243_7 geranyltranstransferase [Pseudomonas putida KT2440]
Length = 295
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 119/267 (44%), Positives = 168/267 (62%), Gaps = 3/267 (1%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLD 149
+++ AMRYS++ GGKRVRPLL A+CE +G A AACA+E+IH SL+HDDLP +D
Sbjct: 30 RLYAAMRYSVMNGGKRVRPLLAYAACEALGAPAEQANGAACAVELIHAYSLVHDDLPAMD 89
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAE-MCSAMG 208
+D+ RR +P +H+ F E+ AILAGD L SLA + D + A+ + + A G
Sbjct: 90 DDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLDPCLSPQIDSIRLAMVQVLAKAAG 149
Query: 209 VEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGG-GNAIEVERVRN 267
G+V G+ +D+ S G+ + + LE++H HKT L+EA+V GA+ ++++ ++
Sbjct: 150 PAGMVGGQAIDLGSVGQKLDQQALEFMHRHKTGALIEASVRLGALASARAEPVQLDALQT 209
Query: 268 YARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQA 327
YA+ IGL FQV DDILDV + LGK G D+A K TYP L+G+E AK++A EL QA
Sbjct: 210 YAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLEAAKAYAIELRDQA 269
Query: 328 IEELAYFEASKAAPLYFLANYIASRQN 354
+ L F KA PL LA YI R+N
Sbjct: 270 LAALQGF-GEKAEPLRALARYIVERRN 295
>gi|422322210|ref|ZP_16403252.1| geranyltranstransferase [Achromobacter xylosoxidans C54]
gi|317402859|gb|EFV83401.1| geranyltranstransferase [Achromobacter xylosoxidans C54]
Length = 303
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 119/301 (39%), Positives = 176/301 (58%), Gaps = 15/301 (4%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQP----PVKIHKAMRYSLLAGGKRVRPLLCIAS---CE 116
F E++ + V LD+ +L P P ++H+AMRY++L GGKRVR L A+ C
Sbjct: 8 FPEWLQGRVRHVEDVLDD--LLPPADAVPARLHEAMRYAVLGGGKRVRAALVYAAGQACP 65
Query: 117 LVG---GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAG 173
+ G E+ AA A+E+IH SL+HDDLP +D+D RR +P +H F E+TA+LAG
Sbjct: 66 VSGSVLAVEASLDRAAAAVELIHAYSLVHDDLPCMDDDVLRRGRPTTHVQFDEATAMLAG 125
Query: 174 DALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELE 233
DAL LA E +A ++P +V+A + A G +G+ G+ +D+ S G+ +S +L+
Sbjct: 126 DALQPLAFELLASMP--IAPALIVQATQSLARAAGSQGMAGGQAIDLFSVGRSLSRDDLQ 183
Query: 234 YIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELG 293
+H KT +L +V G ++ G ++ + + YA+ +GL FQVVDDILDVT S LG
Sbjct: 184 LMHSMKTGAMLACSVALGGIVAGASSASRQALDVYAQAMGLAFQVVDDILDVTADSASLG 243
Query: 294 KTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
KT GKD A K TY L+G++ A++FAGEL A+ L + L LA++I R
Sbjct: 244 KTPGKDAAENKPTYVSLLGLDEARAFAGELREAALAALEPL-GDAGSRLAELADFIVLRD 302
Query: 354 N 354
Sbjct: 303 R 303
>gi|225018823|ref|ZP_03708015.1| hypothetical protein CLOSTMETH_02773 [Clostridium methylpentosum
DSM 5476]
gi|224948383|gb|EEG29592.1| hypothetical protein CLOSTMETH_02773 [Clostridium methylpentosum
DSM 5476]
Length = 300
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 114/274 (41%), Positives = 164/274 (59%), Gaps = 4/274 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
EY+ ++ + L + +LQ V AMRYS+ AGGKR+RP+L + C ++GGD
Sbjct: 12 LNEYIQLVDRELERLLPDEDILQKSVV--DAMRYSVTAGGKRIRPVLTLEVCRMLGGDPH 69
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
A+P ACA+E+IH+ SLIHDDLP +D+D RR KP+ H FGESTA+LAGDALL+LA E
Sbjct: 70 KALPFACAVELIHSYSLIHDDLPCMDDDAMRRGKPSCHIAFGESTALLAGDALLTLAFET 129
Query: 184 V--AVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
A G + +RAI+ + GV G++ G+ +D+ SEG+ + L +H+ KT
Sbjct: 130 ASHAPQTHGTGCEETLRAISILSRLAGVHGMIGGQVIDLESEGRGIEYPVLHQMHLLKTG 189
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
L++AA GA G +++++ YA +GL FQ+ DDILDV +LGK G D
Sbjct: 190 ALIKAACQMGAAAAGAQEEDLDKIGEYADALGLAFQICDDILDVVGDEAQLGKPVGSDKQ 249
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFE 335
K ++ L G+E ++S A + A E LA FE
Sbjct: 250 QQKTSFITLFGLEESRSNAQMMTTLAKESLASFE 283
>gi|339010261|ref|ZP_08642831.1| farnesyl diphosphate synthase [Brevibacillus laterosporus LMG
15441]
gi|338772416|gb|EGP31949.1| farnesyl diphosphate synthase [Brevibacillus laterosporus LMG
15441]
Length = 298
Score = 200 bits (509), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 128/296 (43%), Positives = 181/296 (61%), Gaps = 5/296 (1%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQP-PVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
+F ++Y+ K + L A+ + P +++++M YSL+AGGKR+RP+L +A E
Sbjct: 2 SFRLKDYLDEKIALLEAELPRALSTEGVPSELYESMHYSLMAGGKRLRPILVLAVLEAFQ 61
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
+P A ALEMIHT SLIHDDLP +D+D+ RR KP +H+VFGE+TAILAGDALL+
Sbjct: 62 QPIERGLPYAIALEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDALLTR 121
Query: 180 ALEHVA---VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIH 236
A VA V+ V + V+ IAE+ G G+V G+ DI EGK +SL++LEYIH
Sbjct: 122 AFGLVASSYVHHPEVKAETTVQLIAELGQRAGERGMVGGQMADIMGEGKQLSLEQLEYIH 181
Query: 237 VHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTA 296
+HKT LL AA+ G + +++ + NYA IGL FQ+ DDIL+V + LGK
Sbjct: 182 LHKTGDLLIAALRGGGYLAEATPKQLQALTNYAVKIGLAFQIKDDILNVEGDAALLGKAV 241
Query: 297 GKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
G D + KATYP L+G+ +K L+ +A ELA + + A L+ LA Y+ R
Sbjct: 242 GSDASKEKATYPALLGLAESKRRLALLVKEAQAELAAVKINHPA-LFALAEYVMER 296
>gi|340756656|ref|ZP_08693261.1| dimethylallyltranstransferase [Fusobacterium varium ATCC 27725]
gi|251833919|gb|EES62482.1| dimethylallyltranstransferase [Fusobacterium varium ATCC 27725]
Length = 295
Score = 200 bits (509), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 110/292 (37%), Positives = 171/292 (58%), Gaps = 2/292 (0%)
Query: 64 FEEYMIRKAEQVNKALDEAV-VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
F+ Y+ + + LD + L P I + M+Y++L GGKR+RP+L +++ D+
Sbjct: 3 FKNYLDNSKKLIESNLDIYLNELNYPEVIAEGMKYAVLNGGKRLRPILLFMVLDILDCDK 62
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
+ +A A+EMIH+ SL+HDDLP LDND+ RR K +H+ FGE+ IL GDALL+ A
Sbjct: 63 EKGIASAAAIEMIHSYSLVHDDLPALDNDDYRRGKLTTHKKFGEAEGILIGDALLTHAFY 122
Query: 183 HVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAK 242
+ + +++V + S G+ G++ G+ VDIASEGK + L+ L+Y+H +KT K
Sbjct: 123 ILTEKNKHLPAEKIVEIVRLTSSYAGINGMIGGQMVDIASEGKKIDLETLKYMHSNKTGK 182
Query: 243 LLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
L++ V +IG + E E + ++ IGL FQ+ DDILD+ LGK G D+
Sbjct: 183 LMKLPVELACIIGDADREEREVLVKFSELIGLAFQIKDDILDIEGDFSTLGKPVGSDIEL 242
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELA-YFEASKAAPLYFLANYIASRQ 353
GK+TYP L+G+ +K+ E + +A +A F K+ L LA+YI +R
Sbjct: 243 GKSTYPSLIGMAESKTLLKETIAEAKMIVAEKFGVEKSNILLELADYIGNRN 294
>gi|417550902|ref|ZP_12201981.1| polyprenyl synthetase [Acinetobacter baumannii Naval-18]
gi|417565272|ref|ZP_12216146.1| polyprenyl synthetase [Acinetobacter baumannii OIFC143]
gi|395557028|gb|EJG23029.1| polyprenyl synthetase [Acinetobacter baumannii OIFC143]
gi|400386727|gb|EJP49801.1| polyprenyl synthetase [Acinetobacter baumannii Naval-18]
Length = 303
Score = 200 bits (509), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 117/272 (43%), Positives = 165/272 (60%), Gaps = 6/272 (2%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG-DESWAMPAACALEMIHTMSLIHDDLP 146
P + A+ ++++ GGKRVRP LC A+ L + + A AA A+E+IH SL HDDLP
Sbjct: 33 PEPLKSAVHHAVMLGGKRVRPALCYATASLQPNPNFAAARRAAVAVELIHCYSLAHDDLP 92
Query: 147 FLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNI---AGVSPDRVVRAIAEM 203
+DND RR +P H FGE TA+LAGD L S+A E + + G D +
Sbjct: 93 CMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQMQ 152
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAV-IGGGNAIEV 262
A +V+G+ +D+ +EGK ++ ELE IH +KT L++AA++ GAV I G +
Sbjct: 153 ILATASSKMVSGQVLDLQAEGKQITQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQAI 212
Query: 263 ERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGE 322
++R Y + IGL FQV+DDILD+T S+E LGKTAGKD K+TYP LMG+E A+ +A E
Sbjct: 213 PKLRQYGQTIGLAFQVLDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQVYAKE 272
Query: 323 LLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L QA E LA+F A L ++ ++ +R N
Sbjct: 273 LHDQAFEALAHF-GENAKELVEISQFLLARTN 303
>gi|28199392|ref|NP_779706.1| farnesyl-diphosphate synthase [Xylella fastidiosa Temecula1]
gi|182682121|ref|YP_001830281.1| polyprenyl synthetase [Xylella fastidiosa M23]
gi|386083439|ref|YP_005999721.1| polyprenyl synthetase [Xylella fastidiosa subsp. fastidiosa GB514]
gi|28057498|gb|AAO29355.1| geranyltranstransferase [Xylella fastidiosa Temecula1]
gi|182632231|gb|ACB93007.1| Polyprenyl synthetase [Xylella fastidiosa M23]
gi|307578386|gb|ADN62355.1| polyprenyl synthetase [Xylella fastidiosa subsp. fastidiosa GB514]
Length = 291
Score = 200 bits (509), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 117/291 (40%), Positives = 169/291 (58%), Gaps = 5/291 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
F + R + + L ++ Q P ++ AMRY++L+GGKR+RPLL A+ L DE
Sbjct: 6 FTRWCQRTDSYLERTL--SIPTQAPQRLQAAMRYTVLSGGKRIRPLLVYAAGHLFHVDEP 63
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
A A+E+IH SL+HDDLP +D+D RR +P H F E+TAIL GDAL +LA E
Sbjct: 64 LLDVPAAAVELIHAYSLVHDDLPAMDDDLLRRGRPTVHIAFDEATAILTGDALQTLAFEC 123
Query: 184 VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
+A A S + + + A GV G+ G+ +DI + G+ +LK LE +H K+ L
Sbjct: 124 LADAPADTS--LRIAWLQTLTHAAGVAGMCGGQALDIDATGQSQTLKALEAMHALKSGTL 181
Query: 244 LEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASG 303
+ AAV GA+ G +A ++ + +A +GL FQV DDILD+ SSE+LGKTAGKD
Sbjct: 182 MRAAVRMGALAGDPSAEDLHSLDTFAATLGLAFQVRDDILDIESSSEQLGKTAGKDAIQQ 241
Query: 304 KATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K+T+P L+ +E AK + EL + +L + +AAPL LA R +
Sbjct: 242 KSTFPALLSVEGAKCYLQELAERLYTQLHPY-GERAAPLTALARLAVERAH 291
>gi|373856764|ref|ZP_09599508.1| Polyprenyl synthetase [Bacillus sp. 1NLA3E]
gi|372453743|gb|EHP27210.1| Polyprenyl synthetase [Bacillus sp. 1NLA3E]
Length = 297
Score = 200 bits (509), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 112/261 (42%), Positives = 163/261 (62%), Gaps = 13/261 (4%)
Query: 81 EAVV--LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTM 138
EA++ L P + ++M YSL AGGKR+RPLL A+ + G D + A A+EMIHT
Sbjct: 22 EALIKKLHAPDILKESMLYSLKAGGKRIRPLLLFATLQAFGMDPRKGLYPAVAIEMIHTY 81
Query: 139 SLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRV-V 197
SLIHDDLP +DND+ RR KP +H+VFG++ AILAGD LL+ + + ++ S R V
Sbjct: 82 SLIHDDLPSMDNDDLRRGKPTNHKVFGDAVAILAGDGLLTYSFQVLSEMPEQDSDVRTKV 141
Query: 198 RAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGG 257
I+ + A G EG+V G+ DI EGK ++L ELEYIH+HKT KLL V+ GA++
Sbjct: 142 GLISLLAQAAGAEGMVGGQVADIEGEGKHLNLTELEYIHLHKTGKLLVCCVMSGALMANA 201
Query: 258 NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAK 317
+ + + +A+ +G+ FQ+ DDILD+ + E +GK G D + K TYP L+ ++ AK
Sbjct: 202 SKEQASNLEAFAKHLGMAFQIRDDILDLEGNEELIGKPIGSDEENLKNTYPSLLTMDGAK 261
Query: 318 SFAGELLGQAIEELAYFEASK 338
+A+++ +FEASK
Sbjct: 262 --------KAMQQ--HFEASK 272
>gi|408414645|ref|YP_006625352.1| geranyltranstransferase [Bordetella pertussis 18323]
gi|401776815|emb|CCJ62054.1| probable geranyltranstransferase [Bordetella pertussis 18323]
Length = 303
Score = 200 bits (509), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 177/300 (59%), Gaps = 21/300 (7%)
Query: 66 EYMIRKAEQVNKALDEAVVLQP-----PVKIHKAMRYSLLAGGKRVRPLLCIAS---CEL 117
+++ +A+ V LDE L P P ++H+AMRY++L GGKRVR L A+ C +
Sbjct: 10 DWLRERAQHVEHVLDE---LLPGADIVPTRLHEAMRYAVLGGGKRVRAALVYAAGQACPV 66
Query: 118 VGGDESWAMP---AACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGD 174
G + AA A+E+IH SL+HDDLP +D+D RR +P H F E+TA+LAGD
Sbjct: 67 NGSTLAVGASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAGD 126
Query: 175 ALLSLALEHVAVNIAG--VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKEL 232
AL LA E +AG ++P VV+A + A G +G+ G+ +D+ S G+ ++ EL
Sbjct: 127 ALQPLAFE----LLAGMPIAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDEL 182
Query: 233 EYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEEL 292
+ +H KT +L +V G ++ G ++ + + +YA+ IGL FQVVDDILDVT + L
Sbjct: 183 QTMHSMKTGAMLACSVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTASL 242
Query: 293 GKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
GKTAGKD A K TY L+G+E A++ A EL A + LA S A L LA++I R
Sbjct: 243 GKTAGKDAADNKPTYVSLLGLEQARALAQELRQAAHQALAPLGES-GARLGQLADFIVLR 301
>gi|15895350|ref|NP_348699.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum
ATCC 824]
gi|337737298|ref|YP_004636745.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum
DSM 1731]
gi|384458806|ref|YP_005671226.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum
EA 2018]
gi|15025068|gb|AAK80039.1|AE007710_9 Predicted geranylgeranyl pyrophosphate synthase [Clostridium
acetobutylicum ATCC 824]
gi|325509495|gb|ADZ21131.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum
EA 2018]
gi|336291039|gb|AEI32173.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum
DSM 1731]
Length = 289
Score = 200 bits (509), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 104/240 (43%), Positives = 153/240 (63%), Gaps = 1/240 (0%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLD 149
+++++M YSL AGGKRVRPLL +AS + D + A A+EMIHT SLIHDDLP +D
Sbjct: 27 RVYESMNYSLNAGGKRVRPLLLLASYAIYNKDYKEVIDIAAAIEMIHTYSLIHDDLPCMD 86
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGV 209
ND+ RR +P +H++FG S A+LAGD LL+ A+ + G + ++A + A
Sbjct: 87 NDDLRRGRPTNHKIFGYSIALLAGDGLLNEAMNIMFKYCIG-KGEEALKACLMISKAASS 145
Query: 210 EGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYA 269
+G++ G+ VDI SEGK ++ EL Y+H KT +L++AAVV GA++GG +VE + Y
Sbjct: 146 DGMIGGQVVDILSEGKKINEDELRYMHKKKTGELIKAAVVSGAILGGAPLHDVELLSQYG 205
Query: 270 RCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIE 329
+GL FQ+ DDILD+ ++ +GKT+ DL + K TY L GI+ KS EL + ++
Sbjct: 206 DKLGLAFQIEDDILDIIGDTKIMGKTSKSDLENDKCTYVTLYGIDKCKSICRELTDECLD 265
>gi|398901782|ref|ZP_10650573.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM50]
gi|398179393|gb|EJM67005.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM50]
Length = 295
Score = 200 bits (509), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 128/292 (43%), Positives = 183/292 (62%), Gaps = 5/292 (1%)
Query: 67 YMIRKAEQVNKALDEAVVLQPP--VKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW 124
Y +VN AL+ P ++++AMRYS++ GGKRVRPLL A+CE +GG
Sbjct: 5 YSASSQARVNAALETLFNAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGKAEQ 64
Query: 125 AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV 184
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA +
Sbjct: 65 ANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAFSAL 124
Query: 185 A-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
++ + ++ ++ + A G G+V G+ +D+ S G + K LEY+H HKT L
Sbjct: 125 LDPRLSSCDAETRLQMVSALALAAGPAGMVGGQAIDLGSVGLKLDQKALEYMHRHKTGAL 184
Query: 244 LEAAVVCGAVIGGGNAI-EVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
+E +V GA+ G A E++ +++YA+ IGL FQV DDILDV +E LGK G D+A
Sbjct: 185 IEVSVKLGALASGHAAKDELKSLQSYAQAIGLAFQVQDDILDVESDTETLGKRQGADIAR 244
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TYP L+G++ AKS+A EL QA+ L F+A+ A PL LA YI R++
Sbjct: 245 DKPTYPALLGLDAAKSYALELRDQALHALRPFDAA-AEPLRDLARYIVDRRS 295
>gi|386014902|ref|YP_005933179.1| geranyltranstransferase [Pantoea ananatis AJ13355]
gi|386080416|ref|YP_005993941.1| geranyltranstransferase [Pantoea ananatis PA13]
gi|327392961|dbj|BAK10383.1| geranyltranstransferase IspA [Pantoea ananatis AJ13355]
gi|354989597|gb|AER33721.1| geranyltranstransferase IspA [Pantoea ananatis PA13]
Length = 299
Score = 200 bits (509), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 123/296 (41%), Positives = 174/296 (58%), Gaps = 8/296 (2%)
Query: 64 FEEYMIRKAEQVNKALD---EAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
F E + QVN+AL +A+ Q ++ AM+Y L GGKR+RP L A+ E++
Sbjct: 3 FPELLDAYHRQVNRALTGLLDALPFQSSPLVN-AMQYGALLGGKRLRPFLVYATGEMLHA 61
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
D++ A A+E IH SLIHDDLP +D+D RR +P H +GE TAILAGDAL +LA
Sbjct: 62 DKASLDAPAAAVECIHAYSLIHDDLPAMDDDALRRGQPTCHIKYGEDTAILAGDALQTLA 121
Query: 181 LEHVAVN-IAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
+A + GVS + + ++E+ A GV G+ G+ +D+A+EG+ V L +LE IH HK
Sbjct: 122 FSILADQPMPGVSAEYRLAMLSELAKASGVAGMCGGQALDLAAEGQSVGLAQLEQIHRHK 181
Query: 240 TAKLLEAAVVCGAVIGGGNAIE-VERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
T L+ AAV GA G E + + YA IGL FQV DDILDVT + +GK G
Sbjct: 182 TGALIRAAVRLGAFAAGEKGREALPYLDRYADAIGLAFQVQDDILDVTGDTAVIGKRQGA 241
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEAS--KAAPLYFLANYIASR 352
D GK+TYP LMG+++A++ A +L +A++ L A L LA+++ R
Sbjct: 242 DQDLGKSTYPSLMGLDDARTKALDLYQEAVDALHMLSAKSYNTTALKALASFVIER 297
>gi|302024292|ref|ZP_07249503.1| geranyltranstransferase [Streptococcus suis 05HAS68]
gi|330833278|ref|YP_004402103.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis ST3]
gi|329307501|gb|AEB81917.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis ST3]
Length = 289
Score = 200 bits (509), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 110/250 (44%), Positives = 162/250 (64%), Gaps = 7/250 (2%)
Query: 86 QPPV--KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWA--MPAACALEMIHTMSLI 141
QP V ++++++ YSL AGGKR+RPLL + E G + A AAC +E+IHT SLI
Sbjct: 18 QPQVAERLNQSVLYSLQAGGKRIRPLLLLTILESFGMELKQAHYQVAAC-VELIHTGSLI 76
Query: 142 HDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIA 201
HDDLP +DND+ RR + +H+V+ E+TAILAGD+L +A + + ++ +
Sbjct: 77 HDDLPAMDNDDYRRGRLTNHKVYDEATAILAGDSLFLDPFGFLAQ--VDLPAETILALVR 134
Query: 202 EMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIE 261
E+ A G G+VAG+ +D+A EG++++L++L+ IH +KT KLL V +I G + +
Sbjct: 135 ELSQASGTFGMVAGQVLDMAGEGQNLTLEQLQAIHANKTGKLLTFPFVAAGLIAGQSDVV 194
Query: 262 VERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAG 321
+ +R + IGL FQV DDILDVT + EE+GKT KD+ + K+TYP LMG+E +K F
Sbjct: 195 INHLRQAGQLIGLAFQVRDDILDVTTTFEEIGKTPQKDVLAEKSTYPALMGLEASKVFLE 254
Query: 322 ELLGQAIEEL 331
+ L QAI EL
Sbjct: 255 DSLNQAINEL 264
>gi|258511741|ref|YP_003185175.1| polyprenyl synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257478467|gb|ACV58786.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 291
Score = 200 bits (509), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 119/267 (44%), Positives = 173/267 (64%), Gaps = 9/267 (3%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLD 149
++ +AM YSL+A GKR+RP L IA+ E G +PAA A+E+IH SLIHDDLP +D
Sbjct: 28 RLKEAMNYSLMADGKRLRPALVIATAETFGVPRDRVLPAAAAVELIHCYSLIHDDLPCMD 87
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGV 209
+D+ RR +P +H VFGE+ A+LAGDALL+ A +A + GV +R + I + S GV
Sbjct: 88 DDDLRRGQPTNHVVFGEAMALLAGDALLTEAFHLLARPLEGVPAERQLAMIRTLASRAGV 147
Query: 210 EGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVR--- 266
+G+V G+ VDI G +L+++E+IH+HKTA+L++A V IGG A ++VR
Sbjct: 148 DGMVGGQAVDIERTGGQGTLQDVEFIHLHKTARLIQACV----EIGGYFADLDDQVRWAL 203
Query: 267 -NYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLG 325
Y C+GL FQ++DD+LDVT S+E+LGKTAGKD+ GK TYP+ +G+E + A +++
Sbjct: 204 SCYGECLGLAFQMIDDVLDVTASTEQLGKTAGKDVEEGKLTYPRFVGVEKTRQMARDVIR 263
Query: 326 QAIEELAYFEASKAAPLYFLANYIASR 352
+ + LA ++ PL L I R
Sbjct: 264 RGEQALAEV-GVRSEPLKALQALIVER 289
>gi|115358000|ref|YP_775138.1| polyprenyl synthetase [Burkholderia ambifaria AMMD]
gi|115283288|gb|ABI88804.1| farnesyl-diphosphate synthase [Burkholderia ambifaria AMMD]
Length = 294
Score = 200 bits (509), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 130/298 (43%), Positives = 179/298 (60%), Gaps = 13/298 (4%)
Query: 62 FPFEEYMIRKAEQVNKALD-----EAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCE 116
FE++M ++V AL E VV P ++H+AMRY++L GGKRVRPLLC A+ E
Sbjct: 1 MTFEQWMRSVLDRVEDALGHYLPAENVV---PTQLHEAMRYAVLGGGKRVRPLLCHAAGE 57
Query: 117 LVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDAL 176
L G E+ AA ALEMIH SL+HDD+P +D+D RR KP H + E TA+L GDAL
Sbjct: 58 LTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDAL 117
Query: 177 LSLALEHVAVNIA-GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYI 235
S A VA+ A +SP + + E+ A G G+ G+ +D+AS G ++ ++LE +
Sbjct: 118 QSQAF--VALTDADALSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLEKM 175
Query: 236 HVHKTAKLLEAAVVCGAVIGGGNAIEVERVRN-YARCIGLLFQVVDDILDVTKSSEELGK 294
H KT LL AAV GA+ G + E + YA +GL FQVVDDILDVT S LGK
Sbjct: 176 HRMKTGALLRAAVRMGALAGETPSAETLAALDVYAAAVGLAFQVVDDILDVTTDSATLGK 235
Query: 295 TAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
TAGKD A+ K TY ++G++ ++ A +L +A + L F A +A L LA+ + +R
Sbjct: 236 TAGKDAANDKPTYVSILGLDASRELAAQLRAEAHDALKPFGA-RAQRLAELADLVVNR 292
>gi|33593755|ref|NP_881399.1| geranyltranstransferase [Bordetella pertussis Tohama I]
gi|384205043|ref|YP_005590782.1| geranyltranstransferase [Bordetella pertussis CS]
gi|410420906|ref|YP_006901355.1| geranyltranstransferase [Bordetella bronchiseptica MO149]
gi|427824861|ref|ZP_18991923.1| probable geranyltranstransferase [Bordetella bronchiseptica Bbr77]
gi|33563828|emb|CAE43072.1| probable geranyltranstransferase [Bordetella pertussis Tohama I]
gi|332383157|gb|AEE68004.1| geranyltranstransferase [Bordetella pertussis CS]
gi|408448201|emb|CCJ59882.1| probable geranyltranstransferase [Bordetella bronchiseptica MO149]
gi|410590126|emb|CCN05205.1| probable geranyltranstransferase [Bordetella bronchiseptica Bbr77]
Length = 303
Score = 200 bits (509), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 177/300 (59%), Gaps = 21/300 (7%)
Query: 66 EYMIRKAEQVNKALDEAVVLQP-----PVKIHKAMRYSLLAGGKRVRPLLCIAS---CEL 117
+++ +A+ V LDE L P P ++H+AMRY++L GGKRVR L A+ C +
Sbjct: 10 DWLRERAQHVEHVLDE---LLPGADIAPTRLHEAMRYAVLGGGKRVRAALVYAAGQACPV 66
Query: 118 VGGDESWAMP---AACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGD 174
G + AA A+E+IH SL+HDDLP +D+D RR +P H F E+TA+LAGD
Sbjct: 67 NGSTLAVGASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAGD 126
Query: 175 ALLSLALEHVAVNIAG--VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKEL 232
AL LA E +AG ++P VV+A + A G +G+ G+ +D+ S G+ ++ EL
Sbjct: 127 ALQPLAFE----LLAGMPIAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDEL 182
Query: 233 EYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEEL 292
+ +H KT +L +V G ++ G ++ + + +YA+ IGL FQVVDDILDVT + L
Sbjct: 183 QTMHSMKTGAMLACSVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTASL 242
Query: 293 GKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
GKTAGKD A K TY L+G+E A++ A EL A + LA S A L LA++I R
Sbjct: 243 GKTAGKDAADNKPTYVSLLGLEQARALAQELRQAAHQALAPLGES-GARLGQLADFIVLR 301
>gi|291525241|emb|CBK90828.1| Geranylgeranyl pyrophosphate synthase [Eubacterium rectale DSM
17629]
gi|291529300|emb|CBK94886.1| Geranylgeranyl pyrophosphate synthase [Eubacterium rectale M104/1]
Length = 307
Score = 200 bits (509), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 168/279 (60%), Gaps = 6/279 (2%)
Query: 59 LPTFPFEEYMIRKAEQVNKALDEAVVLQPPVK--IHKAMRYSLLAGGKRVRPLLCIASCE 116
L F E + +K E +N L++ + + + I +AM YS+ AGGKR+RP+L +
Sbjct: 7 LNKSQFMEELQQKVEHINDVLEKFLPAEEGQQRIIFEAMNYSVRAGGKRLRPILMEETYH 66
Query: 117 LVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDAL 176
+ GG + P A+EMIHT SL+HDDLP +DNDE RR K +H V+GE+ ILAGDAL
Sbjct: 67 MFGGSSAVIEPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGKKTTHAVYGEAMGILAGDAL 126
Query: 177 LSLALEHVAVNI-AGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKD---VSLKEL 232
L+LA E A V+ RV RA A + GV G+V G+ VD+ SE D ++ ++L
Sbjct: 127 LNLAYETAAKAFDMEVADTRVARAFAVLAKKAGVYGMVGGQVVDVESEKSDDCSITREKL 186
Query: 233 EYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEEL 292
++I+ KT L+E++++ GA++ G ++ EV RV A +GL FQ+ DD+LDVT + E L
Sbjct: 187 DFIYRLKTGALIESSMMIGAILAGASSDEVSRVEQIAAKLGLAFQIQDDVLDVTSTLEVL 246
Query: 293 GKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEEL 331
GK G D + KATY G++ A S + +A E+L
Sbjct: 247 GKPVGSDEKNNKATYVTFEGLDKAVSDVERISKEAEEQL 285
>gi|395797728|ref|ZP_10477016.1| geranyltranstransferase [Pseudomonas sp. Ag1]
gi|395338096|gb|EJF69949.1| geranyltranstransferase [Pseudomonas sp. Ag1]
Length = 295
Score = 200 bits (509), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 131/295 (44%), Positives = 184/295 (62%), Gaps = 5/295 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPV--KIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
+ Y +VN ALD V P ++++AMRYS++ GGKRVRPLL A+CE +G
Sbjct: 2 IDAYQAGSQARVNAALDPLFVAPSPELNRLYEAMRYSVMNGGKRVRPLLAYAACEALGAQ 61
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 62 AEEANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 182 EHVA-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKT 240
+ ++ V+ + +R + + A G G+V G+ +D+ S G + + LEY+H HKT
Sbjct: 122 SALLDPRLSSVNAEIRLRMVTALALAAGPAGMVGGQAIDLGSVGLKLDQQALEYMHRHKT 181
Query: 241 AKLLEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
L+EAAV GA+ G A ++ ++ YAR IGL FQV DDILDV + LGK G D
Sbjct: 182 GALIEAAVHLGALASGRAEAAQLAALQTYARAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+A K TYP L+G+E AK++A EL QA++ L F+A+ A PL LA YI R++
Sbjct: 242 IARDKPTYPSLLGLEAAKAYALELRDQALDALRPFDAA-AEPLRDLARYIVERRH 295
>gi|117618681|ref|YP_857809.1| geranyltranstransferase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117560088|gb|ABK37036.1| geranyltranstransferase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 296
Score = 200 bits (508), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 115/270 (42%), Positives = 159/270 (58%), Gaps = 9/270 (3%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLD 149
++ AMRY LL GGKRVRP L A E++G A A+E IH SL+HDDLP +D
Sbjct: 31 RLRDAMRYGLLLGGKRVRPFLVYAVGEMLGVKNELLDGPAAAVECIHAYSLLHDDLPAMD 90
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRV----VRAIAEMCS 205
ND+ RR +P H+ F E TAILAGDAL +LA +A + PD + VR ++ +
Sbjct: 91 NDDLRRGQPTVHKAFDEGTAILAGDALQTLAFTILADH---PMPDSLLANRVRMLSRLAR 147
Query: 206 AMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGG-NAIEVER 264
A G G+ G+ +D+ +EG+ +S+ ELE +H HKT L+E AV GA+ + +
Sbjct: 148 ASGYLGMCGGQALDLQAEGRQISIAELEQVHRHKTGALIECAVALGALCKADVDETTLSA 207
Query: 265 VRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELL 324
++ YA IGL FQV DDILD+T + LGK G DLA K+TYP L+G++NA+ A EL
Sbjct: 208 LQTYAAAIGLAFQVQDDILDITGDTATLGKRQGSDLAQEKSTYPALLGLDNARELARELH 267
Query: 325 GQAIEELAYFEASKAAPLYFLANYIASRQN 354
G+A+ L + L A+YI R +
Sbjct: 268 GKALTALQSLPYNTDI-LEAFADYIIERTH 296
>gi|398999014|ref|ZP_10701767.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM18]
gi|398132633|gb|EJM21895.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM18]
Length = 295
Score = 200 bits (508), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 126/287 (43%), Positives = 182/287 (63%), Gaps = 9/287 (3%)
Query: 74 QVNKALDEAVVLQPP----VKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAA 129
+VN AL+ + PP ++++AMRYS++ GGKRVRPLL A+CE +GG A AA
Sbjct: 12 RVNAALE--TLFNPPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGKAEQANGAA 69
Query: 130 CALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVA-VNI 188
CA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA + +
Sbjct: 70 CAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAFSALLDPRL 129
Query: 189 AGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAV 248
+ + ++ ++ + A G G+V G+ +D+ S G + K LEY+H HKT L+E +V
Sbjct: 130 SASDAETRLQMVSALALAAGPAGMVGGQAIDLGSVGLKLDQKALEYMHRHKTGALIEVSV 189
Query: 249 VCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATY 307
GA+ G E++ +++YA+ IGL FQV DDILDV + LGK G D+A K TY
Sbjct: 190 KLGALASGQAERDELKSLQSYAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTY 249
Query: 308 PKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
P L+G++ AK++A EL QA+ L F+A+ A PL LA YI R+N
Sbjct: 250 PALLGLDAAKAYALELRDQALHALRPFDAA-AEPLRDLARYIVDRRN 295
>gi|337746949|ref|YP_004641111.1| polyprenyl synthetase [Paenibacillus mucilaginosus KNP414]
gi|336298138|gb|AEI41241.1| polyprenyl synthetase [Paenibacillus mucilaginosus KNP414]
Length = 301
Score = 200 bits (508), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 121/300 (40%), Positives = 177/300 (59%), Gaps = 6/300 (2%)
Query: 60 PTFPFEEYMIRKAEQVNKALDEAVVLQ--PPVKIHKAMRYSLLAGGKRVRPLLCIASCEL 117
P +EY+ A ++ L ++ Q P + +++ YSL+AGGKR+RP+L +A+ E
Sbjct: 3 PEAGIKEYIAALAGRIEDELKTSLPEQWSVPGALRESVMYSLMAGGKRLRPILVLAAAEA 62
Query: 118 VGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALL 177
+ G AMPAA A+EMIHT SLIHDDLP +DND+ RR K +H+V+GE+ AILAGDALL
Sbjct: 63 LQGRAEAAMPAALAVEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEAMAILAGDALL 122
Query: 178 SLALEHVAVNIA---GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEY 234
+ A H AV A GV D VV + E+ G G+V G+ D+ E L+ELEY
Sbjct: 123 THAF-HTAVQAARRHGVPADVVVDIVEELAKLAGAPGMVGGQAADMLGEQGLTKLEELEY 181
Query: 235 IHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGK 294
IH+HKT+ L+ ++ G I G + +++ + + CIGL FQ+ DDILD+ ++LGK
Sbjct: 182 IHLHKTSDLIVFSLKAGGRIAGATSTQLDALERFGTCIGLAFQIQDDILDLIGDEQKLGK 241
Query: 295 TAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
D+ GK TYP +GIE +++ EL +A + + L LA+Y+ R +
Sbjct: 242 PVQSDVKQGKVTYPYFIGIEASEAKVAELTAEAKSAILGGGFPEPRRLLELADYLMKRDH 301
>gi|404379557|ref|ZP_10984613.1| hypothetical protein HMPREF9021_01523 [Simonsiella muelleri ATCC
29453]
gi|294482866|gb|EFG30554.1| hypothetical protein HMPREF9021_01523 [Simonsiella muelleri ATCC
29453]
Length = 297
Score = 200 bits (508), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 123/299 (41%), Positives = 175/299 (58%), Gaps = 9/299 (3%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAV--VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELV 118
T +++ R Q L+ A+ + Q P +H+AMRY L GGKR+RPLL A+ EL
Sbjct: 3 TNNLKQWQQRAQAQTEILLERALPSINQAPETLHEAMRYVTLGGGKRLRPLLVWAAAELG 62
Query: 119 GGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLS 178
++ AA A+E IH SL+HDD+P +DND RR KP H + E TA+L GDAL +
Sbjct: 63 DSVQAACEAAAVAVECIHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEPTALLVGDALQT 122
Query: 179 LALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
LA + ++ A +SP R +R I + A G G+ G+ +D+A+ G D+S +LE +H
Sbjct: 123 LAFDVLSTATA-LSPARQIRMINVLAKASGSMGMAGGQAIDLANVGVDLSQIQLEQMHGW 181
Query: 239 KTAKLLEAAVVCGAVIG---GGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKT 295
KT L+ AAV GA+ NA+ + NYA +GL FQV+DD+LD + LGKT
Sbjct: 182 KTGALIRAAVALGALSCPDLDDNALAA--LDNYATKLGLAFQVIDDVLDCEADTATLGKT 239
Query: 296 AGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
AGKD + K TY KLMG+ A+ +A L+ QAI+ L F+ +A L LA ++ R+N
Sbjct: 240 AGKDAEANKPTYVKLMGLTAAREYANTLIQQAIDALQLFD-ERADRLRQLAEFVVIRKN 297
>gi|223932932|ref|ZP_03624927.1| Polyprenyl synthetase [Streptococcus suis 89/1591]
gi|223898378|gb|EEF64744.1| Polyprenyl synthetase [Streptococcus suis 89/1591]
Length = 289
Score = 200 bits (508), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 110/250 (44%), Positives = 162/250 (64%), Gaps = 7/250 (2%)
Query: 86 QPPV--KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWA--MPAACALEMIHTMSLI 141
QP V ++++++ YSL AGGKR+RPLL + E G + A AAC +E+IHT SLI
Sbjct: 18 QPQVAERLNQSVLYSLQAGGKRIRPLLLLTILESFGMELKQAHYQVAAC-VELIHTGSLI 76
Query: 142 HDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIA 201
HDDLP +DND+ RR + +H+V+ E+TAILAGD+L +A + + ++ +
Sbjct: 77 HDDLPAMDNDDYRRGRLTNHKVYDEATAILAGDSLFLDPFGFLAQ--VDLPAETILALVR 134
Query: 202 EMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIE 261
E+ A G G+VAG+ +D+A EG++++L++L+ IH +KT KLL V +I G + +
Sbjct: 135 ELSQASGTFGMVAGQVLDMAGEGQNLTLEQLQAIHANKTGKLLTFPFVAAGLIAGQSDVV 194
Query: 262 VERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAG 321
+ +R + IGL FQV DDILDVT + EE+GKT KD+ + K+TYP LMG+E +K F
Sbjct: 195 INHLRQAGQLIGLAFQVRDDILDVTATFEEIGKTPQKDVLAEKSTYPALMGLEASKVFLE 254
Query: 322 ELLGQAIEEL 331
+ L QAI EL
Sbjct: 255 DSLNQAINEL 264
>gi|398942446|ref|ZP_10670288.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM41(2012)]
gi|398160626|gb|EJM48891.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM41(2012)]
Length = 300
Score = 200 bits (508), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 128/297 (43%), Positives = 186/297 (62%), Gaps = 10/297 (3%)
Query: 67 YMIRKAEQVNKALDEAVVLQPP--VKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW 124
Y +VN AL+ P ++++AMRYS++ GGKRVRPLL A+CE +GG
Sbjct: 5 YSATSQARVNAALETLFSAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGKAEQ 64
Query: 125 AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE-- 182
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 65 ANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAFSAL 124
Query: 183 ---HVAVNIAGVSPDRV-VRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
++ + A ++ D + ++ ++ + A G G+V G+ +D+ S G + K LEY+H H
Sbjct: 125 LDPRLSNSDAALTSDHLRLQMVSALALAAGPAGMVGGQAIDLGSVGLKLDQKALEYMHRH 184
Query: 239 KTAKLLEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
KT L+E +V GA+ G E++ ++ YA+ IGL FQV DDILDV +E LGK G
Sbjct: 185 KTGALIEVSVKLGALASGRAEKDELKSLQTYAQAIGLAFQVQDDILDVESDTETLGKRQG 244
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
D+A K TYP L+G++ AK++A EL QA+ L F+A+ A PL LA YI +R++
Sbjct: 245 ADIARDKPTYPALLGLDAAKAYALELRDQALHALRPFDAA-AEPLRDLARYIVTRRS 300
>gi|33597051|ref|NP_884694.1| geranyltranstransferase [Bordetella parapertussis 12822]
gi|33566502|emb|CAE37758.1| probable geranyltranstransferase [Bordetella parapertussis]
Length = 303
Score = 200 bits (508), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 178/300 (59%), Gaps = 21/300 (7%)
Query: 66 EYMIRKAEQVNKALDEAVVLQP-----PVKIHKAMRYSLLAGGKRVRPLLCIAS---CEL 117
+++ +A+ V LDE L P P ++H+AMRY++L GGKRVR +L A+ C +
Sbjct: 10 DWLRERAQHVEHVLDE---LLPGADIAPTRLHEAMRYAVLGGGKRVRAVLVYAAGQACPV 66
Query: 118 VGGDESWAMP---AACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGD 174
G + AA A+E+IH SL+HDDLP +D+D RR +P H F E+TA+LAGD
Sbjct: 67 NGSTLAVGASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAGD 126
Query: 175 ALLSLALEHVAVNIAG--VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKEL 232
AL LA E +AG ++P VV+A + A G +G+ G+ +D+ S G+ ++ EL
Sbjct: 127 ALQPLAFE----LLAGMPIAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDEL 182
Query: 233 EYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEEL 292
+ +H KT +L +V G ++ G ++ + + +YA+ IGL FQVVDDILDVT + L
Sbjct: 183 QTMHSMKTGAMLACSVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTASL 242
Query: 293 GKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
GKTAGKD A K TY L+G++ A++ A EL A + LA S A L LA++I R
Sbjct: 243 GKTAGKDAADNKPTYVSLLGLDQARALAQELRQAAHQALAPLGES-GARLGQLADFIVLR 301
>gi|291616530|ref|YP_003519272.1| IspA [Pantoea ananatis LMG 20103]
gi|291151560|gb|ADD76144.1| IspA [Pantoea ananatis LMG 20103]
Length = 299
Score = 200 bits (508), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 123/296 (41%), Positives = 174/296 (58%), Gaps = 8/296 (2%)
Query: 64 FEEYMIRKAEQVNKALD---EAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
F E + QVN+AL +A+ Q ++ AM+Y L GGKR+RP L A+ E++
Sbjct: 3 FPELLDAYHRQVNRALTGLLDALPFQSSPLVN-AMQYGALLGGKRLRPFLVYATGEMLHA 61
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
D++ A A+E IH SLIHDDLP +D+D RR +P H +GE TAILAGDAL +LA
Sbjct: 62 DKASLDAPAAAVECIHAYSLIHDDLPAMDDDALRRGQPTCHIKYGEDTAILAGDALQTLA 121
Query: 181 LEHVAVN-IAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
+A + GVS + + ++E+ A GV G+ G+ +D+A+EG+ V L +LE IH HK
Sbjct: 122 FSILADQPMPGVSAEYRLAMLSELAKASGVAGMCGGQALDLAAEGQSVGLAQLEQIHRHK 181
Query: 240 TAKLLEAAVVCGAVIGGGNAIE-VERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
T L+ AAV GA G E + + YA IGL FQV DDILDVT + +GK G
Sbjct: 182 TGALIRAAVRLGAFAAGEKGREALPYLDRYADAIGLAFQVQDDILDVTGDTAVIGKRQGA 241
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEAS--KAAPLYFLANYIASR 352
D GK+TYP LMG+++A++ A +L +A++ L A L LA+++ R
Sbjct: 242 DQDLGKSTYPSLMGLDDARTKALDLYQEAVDALHMLSAKSYNTKALKALASFVIER 297
>gi|398983680|ref|ZP_10690144.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM24]
gi|399012337|ref|ZP_10714661.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM16]
gi|398115899|gb|EJM05672.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM16]
gi|398156852|gb|EJM45264.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM24]
Length = 295
Score = 200 bits (508), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 125/294 (42%), Positives = 179/294 (60%), Gaps = 9/294 (3%)
Query: 67 YMIRKAEQVNKALDEAVVLQPPV----KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
Y +VN AL+ + P+ ++++AMRYS++ GGKRVRPLL A+CE +GG
Sbjct: 5 YTATSQTRVNAALE--TLFNAPLPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGKA 62
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 63 EQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAFS 122
Query: 183 HVA-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
+ ++ S D ++ + + A G G+V G+ +D+ S G + LE +H HKT
Sbjct: 123 ALLDPRLSDCSSDIRLQMVTALAQAAGPAGMVGGQAIDLGSVGLKLDQNALEQMHRHKTG 182
Query: 242 KLLEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
L+E +V GA+ G E+ ++ YA+ IGL FQV DDILDV + LGK G D+
Sbjct: 183 ALIEVSVKLGALASGRAEQDELRALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADI 242
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A K TYP L+G++ AK++A EL QA+ L F+A+ A PL LA YI R++
Sbjct: 243 ARDKPTYPALLGLDAAKAYALELRDQALHALRPFDAA-AEPLRELARYIVERRH 295
>gi|418464203|ref|ZP_13035143.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
RhAA1]
gi|359756999|gb|EHK91155.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
RhAA1]
Length = 296
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 125/297 (42%), Positives = 180/297 (60%), Gaps = 6/297 (2%)
Query: 62 FPFEEYMIRKAEQVNKALDE--AVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
+ F + + +++N+ L + A + P + +AM+Y LL GGKR+RP L A +++G
Sbjct: 2 YQFSQDLQYVQQRINQFLADQFAYIDSAPAPLAEAMKYGLLLGGKRIRPFLVYAIGKMLG 61
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
D + AA A+E IH SLIHDDLP +D+DE RR H F E+TAILAGDAL +L
Sbjct: 62 ADMAQLDYAAAAIEAIHAYSLIHDDLPAMDDDELRRGHQTCHIAFDEATAILAGDALQTL 121
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A E + +I +S ++ + I + +A GV+G+ G+ +D+ SE K +SL+ELE IH++K
Sbjct: 122 AFE-ILTDIPHLSAEQKLMLIKTLSAAAGVKGMCLGQSLDLISEQKIISLQELEQIHLNK 180
Query: 240 TAKLLEAAVVCGAVIGG--GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
T LL AA+ G + + +++ YA IGL FQV DDILD+ S LGKTAG
Sbjct: 181 TGALLTAALKMGFICSPHFADTALAQQLERYATAIGLAFQVQDDILDIEGDSATLGKTAG 240
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
DL + K+TYPKL+G+E AK A EL A+ EL + A LY LA +I R++
Sbjct: 241 SDLTADKSTYPKLLGLEGAKQKAQELYQTALAELKNLPFNTTA-LYALAEFIVKRKS 296
>gi|340363407|ref|ZP_08685743.1| geranyltranstransferase [Neisseria macacae ATCC 33926]
gi|339885998|gb|EGQ75683.1| geranyltranstransferase [Neisseria macacae ATCC 33926]
Length = 298
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/270 (41%), Positives = 165/270 (61%), Gaps = 3/270 (1%)
Query: 86 QPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDL 145
Q P +H+AMRY L GGKR+RPLL +A+ EL D++ A A+EM+H SL+HDD+
Sbjct: 31 QVPHTLHEAMRYVTLGGGKRLRPLLVLAASELGDADQNAIEQAMAAIEMVHVYSLVHDDM 90
Query: 146 PFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCS 205
P +DND RR KP H + E+TA+L GDAL + A + V G+ +R + ++ +
Sbjct: 91 PAMDNDSLRRGKPTCHVKYDEATALLVGDALQTQAFD-VLSRPTGLPAERQIAMLSTLAK 149
Query: 206 AMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGG-NAIEVER 264
A G G+ G+ +D+A+ GK ++ +LE +H KT L+ AAVV GA+ ++ +V
Sbjct: 150 ASGSLGMAGGQAIDLANVGKAMNQAQLEQMHSLKTGALIRAAVVLGALACPDLDSDDVRT 209
Query: 265 VRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELL 324
+ YA +GL FQV+DD+LD + LGKTAGKD + K TY KLMG++ A+++A L
Sbjct: 210 LDKYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDSDNDKPTYVKLMGLQAARAYAETLT 269
Query: 325 GQAIEELAYFEASKAAPLYFLANYIASRQN 354
+A L F A KA L LA ++ +R+N
Sbjct: 270 AEAATLLEPFGA-KALHLRLLAEFVTARKN 298
>gi|170730756|ref|YP_001776189.1| geranyltranstransferase [Xylella fastidiosa M12]
gi|167965549|gb|ACA12559.1| geranyltranstransferase [Xylella fastidiosa M12]
Length = 291
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/291 (39%), Positives = 168/291 (57%), Gaps = 5/291 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
F + R + + L ++ Q P ++H AMRY++L+GGKR+RPLL A+ L DE
Sbjct: 6 FTRWCQRTDSYLERTL--SIPTQAPQRLHAAMRYTVLSGGKRIRPLLVYAAGHLFHVDEP 63
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
A A+E+IH SL+HDDLP +D+D RR +P H F E+TAIL GDAL +LA E
Sbjct: 64 LLDVPAAAVELIHAYSLVHDDLPAMDDDLLRRGRPTVHIAFDEATAILTGDALQTLAFEC 123
Query: 184 VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
+A A S + + + A GV G+ G+ +DI + G+ +LK LE +H K+ L
Sbjct: 124 LADAPADAS--LRIAWLQTLTHAAGVAGMCGGQALDIDATGQSQTLKALEAMHALKSGTL 181
Query: 244 LEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASG 303
+ AAV GA+ G + ++ + +A +GL FQV DDILD+ SSE+LGKT GKD
Sbjct: 182 MRAAVRMGALAGDPSPEDLHSLDTFAATLGLAFQVRDDILDIESSSEQLGKTTGKDAIQQ 241
Query: 304 KATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K+T+P L+ +E AK + EL + +L + +AAPL LA R +
Sbjct: 242 KSTFPALLSVEGAKCYLQELAERLYTQLHPY-GERAAPLTALARLAVERAH 291
>gi|373494873|ref|ZP_09585470.1| hypothetical protein HMPREF0380_01108 [Eubacterium infirmum F0142]
gi|371967235|gb|EHO84707.1| hypothetical protein HMPREF0380_01108 [Eubacterium infirmum F0142]
Length = 297
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 114/251 (45%), Positives = 162/251 (64%), Gaps = 6/251 (2%)
Query: 91 IHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDN 150
++++M YSL AGGKR+RP+L +A+CE GG+ A+P ACA+E IHT SLIHDDLP +D+
Sbjct: 30 LYESMVYSLTAGGKRLRPVLLLAACEFAGGNSVEALPFACAMEYIHTYSLIHDDLPAMDD 89
Query: 151 DERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGV--SPDRVVRAIAEM---CS 205
D+ RR KP +H++FG+ A LAGD LL+ A E + N+ PD + + I M
Sbjct: 90 DDLRRGKPTNHKIFGDGMATLAGDGLLNTAFEVMNKNLLMYFDKPDELKKRINAMYCIAK 149
Query: 206 AMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERV 265
A GV G++AG+ DI +E D + + LEYIH++KT L+ AAV G +G + V+ +
Sbjct: 150 AAGVGGMIAGQASDIENENTDCTNELLEYIHINKTGALITAAVRAGLYLGNADDEMVKNM 209
Query: 266 RNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLG 325
YA C+GL FQ+ DDILDV + E+LGK G D A K TY + G+EN+ + EL
Sbjct: 210 TKYAECMGLAFQIADDILDVKGNPEKLGKNTGADAAKSKTTYISVNGLENSVNRLEELTD 269
Query: 326 QAIEELA-YFE 335
QA+E +A Y++
Sbjct: 270 QAVEAIAPYYD 280
>gi|390453366|ref|ZP_10238894.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus peoriae KCTC
3763]
Length = 307
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 119/295 (40%), Positives = 177/295 (60%), Gaps = 4/295 (1%)
Query: 64 FEEYMIRKAEQVNKALDEA--VVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F+EY+ A+ V+ AL E P + ++M YSL AGGKR+RPLL IA+ E GG
Sbjct: 13 FKEYLNGTADAVSSALTEQFPAHWNIPAVLRESMNYSLTAGGKRLRPLLVIAAAEAFGGS 72
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
A+P ACA+EM+HT SLIHDDLP +D+D+ RR K +H+V+GE+ AILAGDALL+ A
Sbjct: 73 REAALPVACAVEMVHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEAVAILAGDALLTHAF 132
Query: 182 EHV--AVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
V A G+S D ++ + E+ G G+V G+ D++ E ++ELEYIH+HK
Sbjct: 133 YSVVQAGRRHGISSDALLSIVEELSEMSGARGMVGGQVADMSGEQGLTGIEELEYIHLHK 192
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
TA L+ +++ G IGG N ++E +R + R +GL FQ+ DDILD+ ++GK D
Sbjct: 193 TADLIIFSLLAGGRIGGANKNQLEALRQFGRDLGLAFQIQDDILDLIGDESKMGKKTQSD 252
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K TYP +G+E ++ +L A + L ++ L +A+Y+ R +
Sbjct: 253 VEQEKVTYPFFIGMEASQQQVEKLTATAKKALIEGGIPDSSRLLEIADYLMKRDH 307
>gi|146319308|ref|YP_001199020.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33]
gi|146321511|ref|YP_001201222.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis 98HAH33]
gi|253752341|ref|YP_003025482.1| geranyltranstransferase [Streptococcus suis SC84]
gi|253754167|ref|YP_003027308.1| geranyltranstransferase [Streptococcus suis P1/7]
gi|253756101|ref|YP_003029241.1| geranyltranstransferase [Streptococcus suis BM407]
gi|386578477|ref|YP_006074883.1| polyprenyl synthetase [Streptococcus suis GZ1]
gi|386580550|ref|YP_006076955.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis JS14]
gi|386582624|ref|YP_006079028.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis SS12]
gi|386588746|ref|YP_006085147.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis A7]
gi|389857159|ref|YP_006359402.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis ST1]
gi|403062097|ref|YP_006650313.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis S735]
gi|145690114|gb|ABP90620.1| Geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33]
gi|145692317|gb|ABP92822.1| Geranylgeranyl pyrophosphate synthase [Streptococcus suis 98HAH33]
gi|251816630|emb|CAZ52270.1| putative geranyltranstransferase [Streptococcus suis SC84]
gi|251818565|emb|CAZ56398.1| putative geranyltranstransferase [Streptococcus suis BM407]
gi|251820413|emb|CAR47048.1| putative geranyltranstransferase [Streptococcus suis P1/7]
gi|292558940|gb|ADE31941.1| Polyprenyl synthetase [Streptococcus suis GZ1]
gi|319758742|gb|ADV70684.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis JS14]
gi|353734770|gb|AER15780.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis SS12]
gi|353740877|gb|AER21884.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis ST1]
gi|354985907|gb|AER44805.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis A7]
gi|402809423|gb|AFR00915.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis S735]
Length = 289
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 109/250 (43%), Positives = 163/250 (65%), Gaps = 7/250 (2%)
Query: 86 QPPV--KIHKAMRYSLLAGGKRVRPLLCIASCELVGGD--ESWAMPAACALEMIHTMSLI 141
QP V ++++++ YSL AGGKR+RPLL + E G + ++ AAC +E+IHT SLI
Sbjct: 18 QPQVAERLNQSVLYSLQAGGKRIRPLLLLTILESFGMELKQAHYQVAAC-VELIHTGSLI 76
Query: 142 HDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIA 201
HDDLP +DND+ RR + +H+V+ E+TAILAGD+L +A + + ++ +
Sbjct: 77 HDDLPAMDNDDYRRGRLTNHKVYDEATAILAGDSLFLDPFGFLAQ--VDLPAETILALVR 134
Query: 202 EMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIE 261
E+ A G G+VAG+ +D+A EG++++L++L+ IH +KT KLL V +I G + +
Sbjct: 135 ELSQASGTFGMVAGQVLDMAGEGQNLTLEQLQAIHANKTGKLLTFPFVAAGLIAGQSDVV 194
Query: 262 VERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAG 321
+ +R + IGL FQV DDILDVT + EE+GKT KD+ + K+TYP LMG+E +K F
Sbjct: 195 INHLRQAGQLIGLAFQVRDDILDVTATFEEIGKTPQKDVLAEKSTYPALMGLEASKVFLE 254
Query: 322 ELLGQAIEEL 331
+ L QAI EL
Sbjct: 255 DSLNQAINEL 264
>gi|398311372|ref|ZP_10514846.1| geranyltranstransferase [Bacillus mojavensis RO-H-1]
Length = 296
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 117/271 (43%), Positives = 171/271 (63%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
L P + K+M YSL AGGKR+RPL+ +A G E +P CA+EMIHT SLIHDD
Sbjct: 27 LNIPDSLKKSMLYSLEAGGKRLRPLIVLAVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAG-VSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+TA+LAGD LL+ + + + +++ VS ++ +R + E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITSHVSDEVSAEKRLRLVNEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
SA G EG+V G+ D+ +E + V+L+ELE IH KTAKLL V+ GA++ E+E
Sbjct: 147 ISAAGTEGMVGGQIADMEAENRQVTLEELESIHERKTAKLLGFGVIAGAILADAPEEEIE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
+R ++ IG+ FQ+ DDILDV S E++GK G D + K+TYP L+ +E AK
Sbjct: 207 TLRAFSSHIGIGFQIRDDILDVEGSEEKIGKRVGSDTTNEKSTYPSLLSLEGAKKKLDGH 266
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A + K LY L + IA+R +
Sbjct: 267 IEEAKRLIGGLSLQKDL-LYELCDLIAARDH 296
>gi|15233848|ref|NP_195558.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana]
gi|85680919|sp|Q39108.2|GGR_ARATH RecName: Full=Heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic; Flags: Precursor
gi|11908118|gb|AAG41488.1|AF326906_1 putative geranylgeranyl pyrophosphate synthase-related protein
[Arabidopsis thaliana]
gi|12642930|gb|AAK00407.1|AF339725_1 putative geranylgeranyl pyrophosphate synthase-related protein
[Arabidopsis thaliana]
gi|13926334|gb|AAK49631.1|AF372915_1 AT4g38460/F20M13_20 [Arabidopsis thaliana]
gi|4467133|emb|CAB37502.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
thaliana]
gi|7270829|emb|CAB80510.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
thaliana]
gi|16323260|gb|AAL15364.1| AT4g38460/F20M13_20 [Arabidopsis thaliana]
gi|21555524|gb|AAM63877.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
thaliana]
gi|332661530|gb|AEE86930.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana]
Length = 326
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/243 (42%), Positives = 147/243 (60%), Gaps = 14/243 (5%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLA-GGKRVRPLLCIASCELVG 119
F Y ++N+ LDEA+ ++ P I++AMRYS+LA G KR P++C+A+CEL G
Sbjct: 44 NFDLRTYWTTLITEINQKLDEAIPVKHPAGIYEAMRYSVLAQGAKRAPPVMCVAACELFG 103
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
GD A P ACALEM+H SLIHDDLP +D+D RR KP++H V+G AILAGDAL L
Sbjct: 104 GDRLAAFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPL 163
Query: 180 ALEHVAVNIAGVSPDRVVRA-----IAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEY 234
A +H+ ++ PD V RA I E+ +G G+ AG++VD+ EG L +
Sbjct: 164 AFQHI---VSHTPPDLVPRATILRLITEIARTVGSTGMAAGQYVDL--EGGPFP---LSF 215
Query: 235 IHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGK 294
+ K + E + VCG ++GG E++ +R Y R +G+L+QVVDDI + K S + G
Sbjct: 216 VQEKKFGAMGECSAVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDITEDKKKSYDGGA 275
Query: 295 TAG 297
G
Sbjct: 276 EKG 278
>gi|410460635|ref|ZP_11314310.1| geranylgeranyl pyrophosphate synthase [Bacillus azotoformans LMG
9581]
gi|409926893|gb|EKN64045.1| geranylgeranyl pyrophosphate synthase [Bacillus azotoformans LMG
9581]
Length = 275
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 121/271 (44%), Positives = 173/271 (63%), Gaps = 4/271 (1%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
++ P I ++M YSL AGGKR+RP+L A+ G DE + ACALEMIHT SLIHDD
Sbjct: 8 IEAPEIIKESMIYSLNAGGKRLRPILLFATLHAFGKDEKLGIDVACALEMIHTYSLIHDD 67
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMC 204
LP +D+D+ RR KP +H+V+GE+ AILAGD LL+ + E +A + +S IA +
Sbjct: 68 LPSMDDDDLRRGKPTNHKVYGEAVAILAGDGLLTHSFEIIAKS-KELSDTLKANIIAFLA 126
Query: 205 SAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVER 264
A G G+V G+ D+ E KD++++ELEYIH HKT KLL AVV GA+I G + + E
Sbjct: 127 QAAGPSGMVGGQVADLLGEQKDLNVEELEYIHEHKTGKLLRFAVVAGAIIAGASKDQQEC 186
Query: 265 VRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELL 324
+ +AR +GL FQ+ DDILD+ +++GK G D+ K+TYPKL+ +E AK+ + L
Sbjct: 187 LDQFARHLGLAFQIKDDILDIEGDVKQIGKPVGSDVGKDKSTYPKLLTLEGAKNKCNDHL 246
Query: 325 GQAIEELAYFEASKAAPLYF-LANYIASRQN 354
A E L +A+ + L +A+YI +R +
Sbjct: 247 TSAKEWLE--KANVESDLLLEIADYIVNRDH 275
>gi|384176049|ref|YP_005557434.1| geranyltranstransferase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|349595273|gb|AEP91460.1| geranyltranstransferase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
Length = 296
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/271 (42%), Positives = 172/271 (63%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
L P + K+M YSL AGGKR+RPL+ +A G E +P CA+EMIHT SLIHDD
Sbjct: 27 LDMPDSLKKSMLYSLQAGGKRLRPLIVLAVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAG-VSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+TA+LAGD LL+ + + + +++G VS ++ +R + E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITSHVSGEVSAEKRLRLVNEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
SA G EG+V G+ D+ +E + V+L+ELE IH KTAKLL V+ GA++ ++E
Sbjct: 147 ISAAGTEGMVGGQVADMEAENRQVTLEELESIHERKTAKLLGFCVIAGAILADAPEEDIE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
+R ++ IG+ FQ+ DDILD+ S E++GK G D + K+TYP L+ +E AK
Sbjct: 207 TLRAFSSHIGIGFQIRDDILDLEGSEEKIGKRVGSDTTNDKSTYPSLLSLEGAKHKLDVH 266
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A + K LY L + IA+R +
Sbjct: 267 IKEAKRLIDGLSLQKDL-LYELCDLIAARDH 296
>gi|427402583|ref|ZP_18893580.1| hypothetical protein HMPREF9710_03176 [Massilia timonae CCUG 45783]
gi|425718389|gb|EKU81336.1| hypothetical protein HMPREF9710_03176 [Massilia timonae CCUG 45783]
Length = 299
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 122/296 (41%), Positives = 171/296 (57%), Gaps = 9/296 (3%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQP----PVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
F + +V +ALD L P P K+H+AMRY+ L GGKRVRPLL A+ L
Sbjct: 6 FSAWTREVQARVEEALD--AFLPPADRVPHKLHEAMRYTTLGGGKRVRPLLAYAAGALFD 63
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
D + A A+EMIH SL+HDD+P +D+D RR KP H + E+TA+L GD L +
Sbjct: 64 ADPAALARVASAVEMIHVYSLVHDDMPCMDDDALRRGKPTVHVAYDEATALLVGDTLQAQ 123
Query: 180 ALEHVA-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
A E VA ++ A V P R + + + A G G+ G+ +D+ S G ++ ++LE +H
Sbjct: 124 AFEVVASLDAAAVPPARQLTMVRLLAQAAGSNGMCGGQAIDLDSVGLSLTREQLERMHQL 183
Query: 239 KTAKLLEAAVVCGAVIGGGNAI-EVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
KT +L +V+ GA+ G A E+E + Y+ +GL FQVVDD+LD T S LGKTAG
Sbjct: 184 KTGAMLRVSVLLGALAGRDLATHELEALDAYSAAVGLAFQVVDDVLDATADSATLGKTAG 243
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
KD A K TY ++G+E +++ A +L A E LA F KA L LA+ I R+
Sbjct: 244 KDAADNKPTYVSILGLEPSRALAEQLRRDAHEALAPF-GDKAQRLRELADLIVQRK 298
>gi|337278944|ref|YP_004618415.1| Geranyltranstransferase [Ramlibacter tataouinensis TTB310]
gi|334730020|gb|AEG92396.1| Geranyltranstransferase (Farnesyl-diphosphate synthase)-like
protein [Ramlibacter tataouinensis TTB310]
Length = 309
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 122/294 (41%), Positives = 168/294 (57%), Gaps = 1/294 (0%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F + ++ V +AL VV P + AMRY++L GGKR+RPLL +A+ E V G+
Sbjct: 16 FELRGWSEQRLALVEQALSRWVVADAPAGLGDAMRYAVLDGGKRLRPLLVLAAAEAVRGN 75
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
E+ A+ AACA+E+IH SL+HDD+P +DND RR KP H FG++ A+LAGDAL +LA
Sbjct: 76 EAAALRAACAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVKFGQAQALLAGDALQALAF 135
Query: 182 EHVA-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKT 240
E +A + GVS + A G EG+ G+ +D+AS G+ + +L +H KT
Sbjct: 136 ELLAPEDEDGVSATVQAALCRLLARAAGHEGMAGGQAIDLASVGQQLDEPQLREMHRRKT 195
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
LL +V+ GA G + Y +GL FQVVDDILDVT S LGKTAGKD
Sbjct: 196 GALLRGSVMMGAACGDIGTAARAALSRYGAALGLAFQVVDDILDVTADSATLGKTAGKDA 255
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A K TY L+G+E +++ A LL +A+ L L+ LA + R N
Sbjct: 256 AQDKPTYVSLLGLERSRALAAGLLDEALAALGESGLPDTRALHALAKMVVDRDN 309
>gi|238924568|ref|YP_002938084.1| geranyltranstransferase [Eubacterium rectale ATCC 33656]
gi|238876243|gb|ACR75950.1| geranyltranstransferase [Eubacterium rectale ATCC 33656]
Length = 307
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 114/279 (40%), Positives = 168/279 (60%), Gaps = 6/279 (2%)
Query: 59 LPTFPFEEYMIRKAEQVNKALDEAVVLQPPVK--IHKAMRYSLLAGGKRVRPLLCIASCE 116
L F E + +K E +N L++ + ++ + I +AM YS+ AGGKR+RP+L +
Sbjct: 7 LNKSQFMEELQQKVEHINNVLEKFLPVEEGQQRIIFEAMNYSVRAGGKRLRPILMEETYH 66
Query: 117 LVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDAL 176
+ GG + P A+EMIHT SL+HDDLP +DNDE RR K +H V+GE+ ILAGDAL
Sbjct: 67 MFGGSSAVIEPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGKKTTHAVYGEAMGILAGDAL 126
Query: 177 LSLALEHVAVNI-AGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKD---VSLKEL 232
L+LA E A V+ RV RA A + GV G+V G+ VD+ SE D ++ ++L
Sbjct: 127 LNLAYETAAKAFDMEVADTRVARAFAVLAKKAGVYGMVGGQVVDVESEKSDDCSITREKL 186
Query: 233 EYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEEL 292
++I+ KT L+E++++ GA++ G ++ EV RV A +GL FQ+ DD+LDVT + E L
Sbjct: 187 DFIYRLKTGALIESSMMIGAILAGASSDEVSRVEQIAAKLGLAFQIQDDVLDVTSTLEVL 246
Query: 293 GKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEEL 331
GK G D + KATY G++ S + +A E+L
Sbjct: 247 GKPVGSDEKNNKATYVTFEGLDKVVSDVERISKEAEEQL 285
>gi|11692820|gb|AAG40013.1|AF324662_1 AT4g38460 [Arabidopsis thaliana]
Length = 326
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/243 (42%), Positives = 147/243 (60%), Gaps = 14/243 (5%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLA-GGKRVRPLLCIASCELVG 119
F Y ++N+ LDEA+ ++ P I++AMRYS+LA G KR P++C+A+CEL G
Sbjct: 44 NFDLRTYWTTLITEINQKLDEAIPVKHPAGIYEAMRYSVLAQGAKRAPPVMCVAACELFG 103
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
GD A P ACALEM+H SLIHDDLP +D+D RR KP++H V+G AILAGDAL L
Sbjct: 104 GDRLAAFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPL 163
Query: 180 ALEHVAVNIAGVSPDRVVRA-----IAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEY 234
A +H+ ++ PD V RA I E+ +G G+ AG++VD+ EG L +
Sbjct: 164 AFQHI---VSHTPPDLVPRATILRLITEIARTVGSTGMAAGQYVDL--EGGPFPLS---F 215
Query: 235 IHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGK 294
+ K + E + VCG ++GG E++ +R Y R +G+L+QVVDDI + K S + G
Sbjct: 216 VQEKKFGAMGECSAVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDITEDKKKSYDGGA 275
Query: 295 TAG 297
G
Sbjct: 276 EKG 278
>gi|323529243|ref|YP_004231395.1| polyprenyl synthetase [Burkholderia sp. CCGE1001]
gi|323386245|gb|ADX58335.1| Polyprenyl synthetase [Burkholderia sp. CCGE1001]
Length = 293
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/294 (42%), Positives = 176/294 (59%), Gaps = 6/294 (2%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
FE++M +V AL+ + + P K+H+A+RY++L GGKRVRPLLC A+ EL G
Sbjct: 1 MTFEQWMRSVLGRVEAALEHYLPAETIEPAKLHEAVRYAVLGGGKRVRPLLCHAAGELTG 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
AA ALEMIH SL+HDD+P +D+D RR KP H + E+TA+L GDAL S
Sbjct: 61 ARAECLDAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQ 120
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A VA+ ++P + + E+ A G G+ G+ +D+AS G ++ ++LE +H K
Sbjct: 121 AF--VALTSDVLAPAQQAALVRELALASGSIGMCGGQAIDLASVGHTLTREQLETMHRMK 178
Query: 240 TAKLLEAAVVCGAVIGGG-NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
T LL AAV GA+ G +A + + Y+ +GL FQVVDDILDVT S LGKTAGK
Sbjct: 179 TGALLRAAVRMGALAGEAPDANAMRSLDAYSAAVGLAFQVVDDILDVTTDSATLGKTAGK 238
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
D GK TY ++G++ +++ A +L A LA F A +A L LA+ + +R
Sbjct: 239 DAKDGKPTYVSIIGLDASRALAAQLRSDAHAALAPFGA-RAQRLAELADLVVNR 291
>gi|282855621|ref|ZP_06264935.1| geranyltranstransferase [Pyramidobacter piscolens W5455]
gi|282586551|gb|EFB91805.1| geranyltranstransferase [Pyramidobacter piscolens W5455]
Length = 297
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 111/269 (41%), Positives = 154/269 (57%), Gaps = 3/269 (1%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPF 147
P ++ +AM YSLLAGGKR+RP+LC+A E++G +P A A EM HT SLIHDDLP
Sbjct: 30 PARLREAMNYSLLAGGKRLRPILCMAGAEIMGEKAESVLPMATAFEMAHTASLIHDDLPC 89
Query: 148 LDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNI--AGVSPDRVVRAIAEMCS 205
+DND RR KP +H V+GES A+LAGDAL A E + G P R VRA+A
Sbjct: 90 MDNDSLRRGKPTNHVVYGESLALLAGDALFLDAFETALAGLLKNGAEPQRCVRALALFAQ 149
Query: 206 AMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERV 265
A+G EG+ G+ +D + + + KT L+ A++ GA++ G + + R+
Sbjct: 150 ALGPEGICGGQVLDTDRASQTDERDFVVDVASMKTMVLIRASLCAGAILAGADGEALRRL 209
Query: 266 RNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLG 325
Y +GL FQ+ DD+LD T S +GKT GKD A K T+ + G++ A++ E
Sbjct: 210 MKYGENVGLAFQIADDLLDCTGSQSAMGKTLGKDEAQDKRTFVRAYGLDGARALLHEKTL 269
Query: 326 QAIEELAYFEASKAAPLYFLANYIASRQN 354
A ++L F A K A L LA Y+ R N
Sbjct: 270 NAEKQLEPF-AEKGAFLRALAAYLEHRSN 297
>gi|386586739|ref|YP_006083141.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis D12]
gi|353738885|gb|AER19893.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis D12]
Length = 289
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 109/250 (43%), Positives = 163/250 (65%), Gaps = 7/250 (2%)
Query: 86 QPPV--KIHKAMRYSLLAGGKRVRPLLCIASCELVGGD--ESWAMPAACALEMIHTMSLI 141
QP V ++++++ YSL AGGKR+RPLL + E G + ++ AAC +E+IHT SLI
Sbjct: 18 QPQVAERLNQSVLYSLQAGGKRIRPLLLLTILESFGMELKQAHYQVAAC-VELIHTGSLI 76
Query: 142 HDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIA 201
HDDLP +DND+ RR + +H+V+ E+TAILAGD+L +A + + ++ +
Sbjct: 77 HDDLPAMDNDDYRRGRLTNHKVYDEATAILAGDSLFLDPFGFLAQ--VDLPAETILALVR 134
Query: 202 EMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIE 261
E+ A G G+VAG+ +D+A EG++++L++L+ IH +KT KLL V +I G + +
Sbjct: 135 ELSQASGTFGMVAGQVLDMAGEGQNLTLEQLQAIHANKTGKLLTFPFVAAGLIAGQSDVV 194
Query: 262 VERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAG 321
+ +R + IGL FQV DDILDVT + EE+GKT KD+ + K+TYP LMG+E +K F
Sbjct: 195 ISHLRQAGQLIGLAFQVRDDILDVTATFEEIGKTPQKDVLAEKSTYPALMGLEASKVFLE 254
Query: 322 ELLGQAIEEL 331
+ L QAI EL
Sbjct: 255 DSLNQAINEL 264
>gi|254253601|ref|ZP_04946918.1| Geranylgeranyl pyrophosphate synthase [Burkholderia dolosa AUO158]
gi|124898246|gb|EAY70089.1| Geranylgeranyl pyrophosphate synthase [Burkholderia dolosa AUO158]
Length = 294
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 179/295 (60%), Gaps = 7/295 (2%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
FE++M ++V AL + + P ++H+AMRY++L GGKRVRPLLC A+ EL G
Sbjct: 1 MTFEQWMRSVLDRVEDALGHYLPAESAVPTRLHEAMRYAVLGGGKRVRPLLCHAAGELTG 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
E+ AA ALEMIH SL+HDD+P +D+D RR KP H + E TA+L GDAL S
Sbjct: 61 ATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQ 120
Query: 180 ALEHVAVNIA-GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
A VA+ A +SP + + E+ A G G+ G+ +D+AS G ++ ++LE +H
Sbjct: 121 AF--VALTDADALSPVQQAALVRELALASGSLGMAGGQAIDLASVGIKLTREQLETMHRM 178
Query: 239 KTAKLLEAAVVCGAVIGGG-NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
KT LL AAV GA+ G +A + + YA +GL FQVVDDILDVT S LGKTAG
Sbjct: 179 KTGALLRAAVRMGALAGETPSADTMAALDVYAGAVGLAFQVVDDILDVTTDSATLGKTAG 238
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
KD A+ K TY ++G++ ++ A +L +A + L F A +A L LA+ + +R
Sbjct: 239 KDAANDKPTYVSILGLDASRELAAQLRAEAHDALKPFGA-RAQRLAELADLVVNR 292
>gi|386723418|ref|YP_006189744.1| polyprenyl synthetase [Paenibacillus mucilaginosus K02]
gi|384090543|gb|AFH61979.1| polyprenyl synthetase [Paenibacillus mucilaginosus K02]
Length = 301
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 121/300 (40%), Positives = 177/300 (59%), Gaps = 6/300 (2%)
Query: 60 PTFPFEEYMIRKAEQVNKALDEAVVLQ--PPVKIHKAMRYSLLAGGKRVRPLLCIASCEL 117
P +EY+ A ++ L ++ Q P + +++ YSL+AGGKR+RP+L +A+ E
Sbjct: 3 PEAGIKEYIAALAGRIEDELKTSLPEQWSVPGALRESVMYSLMAGGKRLRPILVLAAAEA 62
Query: 118 VGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALL 177
+ G AMPAA A+EMIHT SLIHDDLP +DND+ RR K +H+V+GE+ AILAGDALL
Sbjct: 63 LQGRAEAAMPAALAVEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEAMAILAGDALL 122
Query: 178 SLALEHVAVNIA---GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEY 234
+ A H AV A GV D VV + E+ G G+V G+ D+ E L+ELEY
Sbjct: 123 THAF-HTAVQAARRHGVPADVVVDIVEELAKLAGAPGMVGGQAADMLGEQGLTKLEELEY 181
Query: 235 IHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGK 294
IH+HKT+ L+ ++ G I G + +++ + + CIGL FQ+ DDILD+ ++LGK
Sbjct: 182 IHLHKTSDLIVFSLKAGGRIAGATSAQLDALERFGTCIGLAFQIQDDILDLIGDEQKLGK 241
Query: 295 TAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
D+ GK TYP +GIE +++ EL +A + + L LA+Y+ R +
Sbjct: 242 PVQSDVKQGKVTYPYFIGIEASEAKVAELTAEAKNAILGGGFPEPRRLLELADYLMKRDH 301
>gi|209517792|ref|ZP_03266627.1| Polyprenyl synthetase [Burkholderia sp. H160]
gi|209501738|gb|EEA01759.1| Polyprenyl synthetase [Burkholderia sp. H160]
Length = 293
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 125/294 (42%), Positives = 172/294 (58%), Gaps = 6/294 (2%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
FE++ E+V AL+ + + P +H AMRY++L GGKRVRPLLC A+ EL G
Sbjct: 1 MTFEQWTRSVLERVETALEHYLPAETTEPAGLHGAMRYAVLGGGKRVRPLLCHAAGELTG 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
AA ALEMIH SL+HDD+P +D+D RR KP H + E+TA+L GDAL S
Sbjct: 61 ARAECLDAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQ 120
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A + ++ GV + + E+ A G G+ G+ +D+AS G ++ +LE +H K
Sbjct: 121 AFVVLTSDVLGVPQQASL--VRELALASGSIGMCGGQAIDLASVGHTLTRPQLETMHRMK 178
Query: 240 TAKLLEAAVVCGAVIGGG-NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
T LL AAV GA+ G +A + + YA +GL FQVVDDILDVT S LGKTAGK
Sbjct: 179 TGALLRAAVRMGALAGEAPDAKALASLDAYAAAVGLAFQVVDDILDVTTDSATLGKTAGK 238
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
D GK TY ++G++ ++S A +L A LA F A +A L LA+ + +R
Sbjct: 239 DAKDGKPTYVSIIGLDASRSLAAQLRSDAHAALAPFGA-RAQRLAELADLVVNR 291
>gi|224825912|ref|ZP_03699016.1| Polyprenyl synthetase [Pseudogulbenkiania ferrooxidans 2002]
gi|224602136|gb|EEG08315.1| Polyprenyl synthetase [Pseudogulbenkiania ferrooxidans 2002]
Length = 298
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 123/266 (46%), Positives = 168/266 (63%), Gaps = 2/266 (0%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPF 147
P ++H+AMRYS L GGKRVRPLL A+ ELV + A+EMIH SL+HDD+P
Sbjct: 32 PQRLHEAMRYSTLDGGKRVRPLLVHAAGELVSANPEHLARIGAAVEMIHAYSLVHDDMPC 91
Query: 148 LDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAM 207
+D+D RR KP H F ++TA+L GDAL +LA + +A + GV+ + + + A
Sbjct: 92 MDDDVLRRGKPTCHVAFDDATALLVGDALQTLAFDVLATPLDGVAAAAQLEMVRTLARAS 151
Query: 208 GVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGG-NAIEVERVR 266
G G+ G+ +D+AS G+ +SL ELEY+H KT L+ AAV+ GA+ G +A E ER+
Sbjct: 152 GHGGMAGGQAIDLASVGQTLSLPELEYMHCLKTGALIRAAVLLGALAGTPLSAEETERLD 211
Query: 267 NYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQ 326
++A+ IGL FQVVDD+LDV + LGKTAGKD A+ K TY LMG+ A++FA EL +
Sbjct: 212 HFAKRIGLAFQVVDDVLDVDADTATLGKTAGKDAANDKPTYVSLMGLPEARAFARELRDE 271
Query: 327 AIEELAYFEASKAAPLYFLANYIASR 352
A L F A L LA+YI +R
Sbjct: 272 AFAALDGF-GPAAQRLKDLADYIVAR 296
>gi|421866286|ref|ZP_16297958.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase)
[Burkholderia cenocepacia H111]
gi|358073869|emb|CCE48836.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase)
[Burkholderia cenocepacia H111]
Length = 285
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 123/267 (46%), Positives = 166/267 (62%), Gaps = 5/267 (1%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPF 147
P K+H+AMRY++L GGKRVRPLLC A+ EL G E+ AA ALEMIH SL+HDD+P
Sbjct: 20 PAKLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPC 79
Query: 148 LDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIA-GVSPDRVVRAIAEMCSA 206
+D+D RR KP H + E TA+L GDAL S A VA+ A +SP + + E+ A
Sbjct: 80 MDDDALRRGKPTVHVQYDEPTALLVGDALQSQAF--VALTDADALSPVQQAALVRELALA 137
Query: 207 MGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVR 266
G G+ G+ +D+AS G ++ ++LE +H KT LL AAV GA+ G + E
Sbjct: 138 SGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLRAAVRMGALAGETPSTETMAAL 197
Query: 267 N-YARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLG 325
+ YA +GL FQVVDDILDVT S LGKTAGKD A+ K TY ++G+E ++ A +L
Sbjct: 198 DVYAGAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSILGLEASRELAAQLRA 257
Query: 326 QAIEELAYFEASKAAPLYFLANYIASR 352
+A + L F A +A L LA+ + +R
Sbjct: 258 EAHDALKPFGA-RAQRLAELADLVVNR 283
>gi|398996325|ref|ZP_10699184.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM21]
gi|398127099|gb|EJM16514.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM21]
Length = 295
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 128/294 (43%), Positives = 182/294 (61%), Gaps = 9/294 (3%)
Query: 67 YMIRKAEQVNKALDEAVVLQPP--VKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW 124
Y +VN AL+ P ++++AMRYS++ GGKRVRPLL A+CE +GG
Sbjct: 5 YSATSQARVNAALETLFNAPGPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGKAEQ 64
Query: 125 AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV 184
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 65 ANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAFS-- 122
Query: 185 AVNIAGVSP-DRVVR--AIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
A+ ++P D +R ++ + A G G+V G+ +D+ S G + LEY+H HKT
Sbjct: 123 ALLDPRLNPADAEIRLQMVSALAVAAGPAGMVGGQAIDLGSVGLKLDQTALEYMHRHKTG 182
Query: 242 KLLEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
L+E +V GA+ G E+ +++YA+ +GL FQV DDILDV +E LGK G D+
Sbjct: 183 ALIEVSVKLGALASGRAEKDELNALQSYAQAVGLAFQVQDDILDVESDTETLGKRQGADI 242
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A K TYP L+G++ AK++A EL QA+ L F+A+ A PL LA YI R++
Sbjct: 243 ARDKPTYPALLGLDAAKAYALELRDQALRALRPFDAT-AEPLRDLARYIVDRRS 295
>gi|328952416|ref|YP_004369750.1| farnesyltranstransferase [Desulfobacca acetoxidans DSM 11109]
gi|328452740|gb|AEB08569.1| Farnesyltranstransferase [Desulfobacca acetoxidans DSM 11109]
Length = 296
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 121/270 (44%), Positives = 171/270 (63%), Gaps = 3/270 (1%)
Query: 87 PPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLP 146
P ++ +AMRYSLLAGGKR+RP+LC+A+ E V G+ MP A ALEMIHT SLIHDDLP
Sbjct: 28 PGQRVVEAMRYSLLAGGKRLRPILCLAAAEAVAGNVEQVMPVAGALEMIHTYSLIHDDLP 87
Query: 147 FLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVV--RAIAEMC 204
+D+D+ RR +P H+ F E+TAILAGD LL+ A E +A V + +
Sbjct: 88 AMDDDDFRRGRPTCHKKFDEATAILAGDGLLTAAFEVLAAAATNHPAQASVYHEVVQTIA 147
Query: 205 SAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVER 264
A G +G+V G+ D+ +EG+ +L+++E IH KT LL A+V GA++GGG+A ++
Sbjct: 148 RAAGYQGMVGGQMADLLAEGQPSTLEQVEAIHRLKTGALLTASVRSGALLGGGSARDILA 207
Query: 265 VRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELL 324
+ +Y GL+FQ+ DD+LDV S E+GK G D KATYP +MG+ AK+ A +L+
Sbjct: 208 LTHYGEKFGLIFQITDDLLDVEGESAEMGKPTGMDAIRQKATYPAVMGVAAAKNQARDLV 267
Query: 325 GQAIEELAYFEASKAAPLYFLANYIASRQN 354
A+ +L F +A PL LA Y+ R+
Sbjct: 268 AAALVDLQPF-GERAEPLRQLARYLLVRRQ 296
>gi|222110169|ref|YP_002552433.1| polyprenyl synthetase [Acidovorax ebreus TPSY]
gi|221729613|gb|ACM32433.1| Polyprenyl synthetase [Acidovorax ebreus TPSY]
Length = 306
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 121/260 (46%), Positives = 164/260 (63%), Gaps = 1/260 (0%)
Query: 59 LPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELV 118
+P F F+ +M + +V AL V P + +AMRY++L GGKR+RPLL +A+CE V
Sbjct: 12 VPVFDFDGWMRAQLARVEDALSHWVCPDAPAGLGEAMRYAVLDGGKRLRPLLVLAACEAV 71
Query: 119 GGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLS 178
GG+ A+ AACA+E+IH SL+HDD+P +DND RR KP H FGE+ A+LAGDAL +
Sbjct: 72 GGNAQAALRAACAVELIHAYSLVHDDMPCMDNDVMRRGKPTVHVPFGEARALLAGDALQA 131
Query: 179 LALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
LA E + GV P R E+ A G +G+ G+ +D+AS G +S +L +H
Sbjct: 132 LAFELLTPE-DGVPPAMQARLCRELARAAGADGMAGGQAIDLASVGLQLSEDQLRQMHRL 190
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT LL+A+VV GAV G + + +Y +GL FQVVDD+LDVT+ S LGKTAGK
Sbjct: 191 KTGALLQASVVMGAVCGQTPEGTLRALSDYGAAMGLAFQVVDDVLDVTQDSATLGKTAGK 250
Query: 299 DLASGKATYPKLMGIENAKS 318
D A K TY LMG+E A++
Sbjct: 251 DAACDKPTYVSLMGLEAARA 270
>gi|379720811|ref|YP_005312942.1| polyprenyl synthetase [Paenibacillus mucilaginosus 3016]
gi|378569483|gb|AFC29793.1| polyprenyl synthetase [Paenibacillus mucilaginosus 3016]
Length = 301
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 121/300 (40%), Positives = 177/300 (59%), Gaps = 6/300 (2%)
Query: 60 PTFPFEEYMIRKAEQVNKALDEAVVLQ--PPVKIHKAMRYSLLAGGKRVRPLLCIASCEL 117
P +EY+ A ++ L ++ Q P + +++ YSL+AGGKR+RP+L +A+ E
Sbjct: 3 PEAGIKEYIAALAGRIEDELKTSLPEQWSVPGALRESVMYSLMAGGKRLRPILVLAAAEA 62
Query: 118 VGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALL 177
+ G AMPAA A+EMIHT SLIHDDLP +DND+ RR K +H+V+GE+ AILAGDALL
Sbjct: 63 LQGRAEAAMPAALAVEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEAMAILAGDALL 122
Query: 178 SLALEHVAVNIA---GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEY 234
+ A H AV A GV D VV + E+ G G+V G+ D+ E L+ELEY
Sbjct: 123 THAF-HTAVQAARRHGVPADVVVDIVEELAKLAGAPGMVGGQAADMLGEQGLTKLEELEY 181
Query: 235 IHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGK 294
IH+HKT+ L+ ++ G I G + +++ + + CIGL FQ+ DDILD+ ++LGK
Sbjct: 182 IHLHKTSDLIVFSLKAGGRIAGATSAQLDALERFGTCIGLAFQIQDDILDLIGDEQKLGK 241
Query: 295 TAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
D+ GK TYP +GIE +++ EL +A + + L LA+Y+ R +
Sbjct: 242 PVQSDVKQGKVTYPYFIGIEASEAKVAELTAEAKSAILGGGFPEPRRLLELADYLMKRDH 301
>gi|416107694|ref|ZP_11590661.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
serotype c str. SCC2302]
gi|444346552|ref|ZP_21154516.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
serotype c str. AAS4A]
gi|348005243|gb|EGY45732.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
serotype c str. SCC2302]
gi|443541370|gb|ELT51797.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
serotype c str. AAS4A]
Length = 296
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 125/297 (42%), Positives = 181/297 (60%), Gaps = 6/297 (2%)
Query: 62 FPFEEYMIRKAEQVNKALDE--AVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
+ F + + +++N L + A + P + +AM+Y LL GGKR+RP L A+ +++G
Sbjct: 2 YHFSQDLQHVQQRINHFLAKQFAHIDSAPAPLAEAMKYGLLLGGKRIRPFLVYATGKMLG 61
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
D + AA A+E IH SLIHDDLP +D+DE RR H F E+TAILAGDAL +L
Sbjct: 62 ADMAHLDYAAAAIEAIHAYSLIHDDLPAMDDDELRRGHQTCHIAFDEATAILAGDALQTL 121
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A E + +I +S ++ + I + +A GV+G+ G+ +D+ SE K +SL+ELE IH++K
Sbjct: 122 AFE-ILTDIPHLSAEQKLMLIKTLSAAAGVKGMCLGQSLDLISEQKIISLQELEQIHLNK 180
Query: 240 TAKLLEAAVVCGAVIGG--GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
T LL AA+ G + +A +++ YA IGL FQV DDILD+ S LGKT G
Sbjct: 181 TGALLTAALKMGFICSPHFADAALTQQLERYATAIGLAFQVQDDILDIEGDSATLGKTTG 240
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
DL + K+TYPKL+G+E AK A EL +A+ EL + A LY LA +I R++
Sbjct: 241 SDLTADKSTYPKLLGLEGAKQKALELYERALTELKNLPFNTTA-LYALAEFIVKRKS 296
>gi|299768927|ref|YP_003730953.1| geranyltranstransferase [Acinetobacter oleivorans DR1]
gi|298699015|gb|ADI89580.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter oleivorans DR1]
Length = 303
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 118/274 (43%), Positives = 167/274 (60%), Gaps = 10/274 (3%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG-DESWAMPAACALEMIHTMSLIHDDLP 146
P + A+ ++++ GGKRVRP LC A+ L + + A AA A+E+IH SL HDDLP
Sbjct: 33 PEPLKSAVHHAVMLGGKRVRPALCYATASLQPNPNFAAARRAAVAVELIHCYSLAHDDLP 92
Query: 147 FLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNI-----AGVSPDRVVRAIA 201
+DND RR +P H FGE TA+LAGD L S+A E + + G V++ I
Sbjct: 93 CMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQ 152
Query: 202 EMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAV-IGGGNAI 260
+ +A +V G+ +D+ +E K ++ ELE IH +KT L++AA++ GAV I G
Sbjct: 153 ILATA--TSKMVCGQVLDLQAEAKQIAQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQ 210
Query: 261 EVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFA 320
+ ++R Y + IGL FQV+DDILD+T S+E LGKTAGKD K+TYP LMG+E A+ +A
Sbjct: 211 AIPKLRQYGQTIGLAFQVLDDILDITSSTEALGKTAGKDEQVQKSTYPALMGLEQAQIYA 270
Query: 321 GELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
EL QA E LAYF A L ++ ++ +R N
Sbjct: 271 KELHDQAFEALAYF-GDNAKELVEISQFLLARTN 303
>gi|253990912|ref|YP_003042268.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) FPP
synthase [Photorhabdus asymbiotica]
gi|253782362|emb|CAQ85526.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) FPP
synthase [Photorhabdus asymbiotica]
Length = 305
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 173/298 (58%), Gaps = 6/298 (2%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAV--VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELV 118
+ FE+ + ++VNK L + + P + +AM++ L GGKR+RP L A E+
Sbjct: 6 SIQFEQQLKTYQQRVNKVLISTLSSLTFPNSPLVRAMQHGALLGGKRLRPFLVYAVGEMF 65
Query: 119 GGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLS 178
G + A A+E IH SLIHDDLP +DND+ RR +P H FGE+ AILAGDAL +
Sbjct: 66 GLSANNLDAPAAAVECIHAYSLIHDDLPAMDNDDLRRGQPTCHIKFGEAHAILAGDALQA 125
Query: 179 LALEHVAVN-IAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHV 237
LA E ++ + V+ + +AE+ +A G+ G+ G+ +D+ +EGK + L+ LE IH
Sbjct: 126 LAFEILSKREMPDVTTANRLEMLAELATASGIAGMCGGQSLDLEAEGKHIDLQALEQIHR 185
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEV-ERVRNYARCIGLLFQVVDDILDVTKSSEELGKTA 296
HKT L+ AV GA G + +V + YA+ IGL FQV DDILDV S+E +GK
Sbjct: 186 HKTGALIRCAVKMGAYGAGQSGHDVLPELDQYAQAIGLAFQVQDDILDVIGSTEMIGKRQ 245
Query: 297 GKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFE--ASKAAPLYFLANYIASR 352
G D GK+TYP L+G+E A+ A EL +A++ L E + L LA++I R
Sbjct: 246 GSDQQLGKSTYPALLGLEQAQQKAHELYQEALKALNKLEEKSYNTTTLRTLASFIIER 303
>gi|90022863|ref|YP_528690.1| farnesyl-diphosphate synthase [Saccharophagus degradans 2-40]
gi|89952463|gb|ABD82478.1| farnesyl-diphosphate synthase [Saccharophagus degradans 2-40]
Length = 295
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 126/293 (43%), Positives = 171/293 (58%), Gaps = 4/293 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAVV--LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
++ + E N L+E ++ + +AMRYSLL GGKRVRP+L A+ GG
Sbjct: 5 LTHFLAKYREHTNGLLEERLIGLKHYNTDLIEAMRYSLLLGGKRVRPVLVYAAAYATGGI 64
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
+ A ACA+E IHT SLIHDDLP +D+D RR +P H + E+TAILAGDAL A
Sbjct: 65 SAAADDCACAIEAIHTYSLIHDDLPAMDDDALRRGQPTCHIAYSEATAILAGDALQCQAF 124
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
E +A N + ++AIA + A G G+V G+ +D+A+ K V L+ LE +H HKT
Sbjct: 125 EWLA-NSQHMPASAALQAIAALAKASGASGMVLGQAIDLAAVDKSVDLQHLETMHQHKTG 183
Query: 242 KLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
L+ A+V GA+ G + ++R YA IGL FQV DDILDVT ++ LGK AG D
Sbjct: 184 ALISASVEMGAIAAGATPTQTAQLRQYASAIGLAFQVQDDILDVTANTATLGKEAGADAE 243
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TY L+G++ AK A ELL QA+ + F+ +A L LA YI R +
Sbjct: 244 RNKPTYVSLLGLDGAKHKASELLQQALASIKDFD-ERADILRQLATYIVQRDH 295
>gi|390435700|ref|ZP_10224238.1| geranyltranstransferase [Pantoea agglomerans IG1]
Length = 299
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 121/286 (42%), Positives = 167/286 (58%), Gaps = 6/286 (2%)
Query: 73 EQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAAC 130
+QVN AL + P + AM+Y L GGKR+RP L A+ E++ D + A
Sbjct: 12 QQVNAALTRFIEPLPFQSSPLVNAMQYGALLGGKRLRPFLVYATGEMLHADPASLDAPAA 71
Query: 131 ALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVN-IA 189
A+E IH SLIHDDLP +D+D RR +P H +GE TAILAGDAL +LA +A +
Sbjct: 72 AVECIHAYSLIHDDLPAMDDDALRRGQPTCHIKYGEDTAILAGDALQTLAFSILADQAMP 131
Query: 190 GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVV 249
GVS + + ++E+ A GV G+ G+ +D+A+EGK V L +LE IH HKT L+ +AV
Sbjct: 132 GVSAEYRLMMLSELAKASGVAGMCGGQALDLAAEGKSVDLDQLEQIHRHKTGALIRSAVR 191
Query: 250 CGAVIGGGNAIE-VERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYP 308
GA+ G E + + YA IGL FQV DDILDV + +GK G D GK+TYP
Sbjct: 192 LGALTAGDAGREALPLLDRYAEAIGLAFQVQDDILDVIGDTAVIGKRQGADQHLGKSTYP 251
Query: 309 KLMGIENAKSFAGELLGQAIEELAYFEAS--KAAPLYFLANYIASR 352
L+G+ENA++ A +L +A++ L A L LA++I R
Sbjct: 252 SLLGLENAQAKARDLYQEALDTLEMLAAHSYNTTALQALASFIIER 297
>gi|452124386|ref|ZP_21936970.1| geranyltranstransferase [Bordetella holmesii F627]
gi|452127781|ref|ZP_21940361.1| geranyltranstransferase [Bordetella holmesii H558]
gi|451923616|gb|EMD73757.1| geranyltranstransferase [Bordetella holmesii F627]
gi|451926650|gb|EMD76783.1| geranyltranstransferase [Bordetella holmesii H558]
Length = 303
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/303 (40%), Positives = 176/303 (58%), Gaps = 15/303 (4%)
Query: 60 PTFPFEEYMIRKAEQVNKALDEAVVLQ--PPVKIHKAMRYSLLAGGKRVRPLLCIAS--- 114
P +++ +A+ + + L+E + P ++H AMRY++L GGKRVR L A+
Sbjct: 4 PHLACADWLRDRADHIEQVLEELIPAADVAPARLHDAMRYAVLGGGKRVRAALVYAAGQA 63
Query: 115 CELVG---GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAIL 171
C + G E+ AA A+E+IH SL+HDDLP +D+D RR +P +H F E+TA+L
Sbjct: 64 CPVSGNMLAIEASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTTHVQFDEATAML 123
Query: 172 AGDALLSLALEHVAVNIAG--VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSL 229
AGDAL LA E +AG ++P VV+A + A G G+ G+ +D+ S GK +S
Sbjct: 124 AGDALQPLAFEL----LAGMPIAPALVVQATQVLGRAAGSLGMAGGQAIDLHSVGKTLSR 179
Query: 230 KELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSS 289
EL+ +H KT LL A+V G ++ G ++ + + NYA+ +GL FQVVDDILDVT S
Sbjct: 180 DELQTMHSMKTGALLAASVALGGIVAGASSAARQALDNYAQAMGLAFQVVDDILDVTADS 239
Query: 290 EELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYI 349
LGKTAGKD K TY L+G++ A+ A EL A+ L S A L +A++I
Sbjct: 240 ASLGKTAGKDAVENKPTYVSLLGLDQARELAEELRQAALLALGPLGES-GARLAQIADFI 298
Query: 350 ASR 352
R
Sbjct: 299 VLR 301
>gi|311105029|ref|YP_003977882.1| geranyltranstransferase [Achromobacter xylosoxidans A8]
gi|310759718|gb|ADP15167.1| geranyltranstransferase [Achromobacter xylosoxidans A8]
Length = 303
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 118/299 (39%), Positives = 176/299 (58%), Gaps = 15/299 (5%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQP----PVKIHKAMRYSLLAGGKRVRPLLCIAS---CE 116
F E++ + + V LD+ +L P P ++H+AMRY++L GGKRVR L A+ C
Sbjct: 8 FPEWLQGRVQHVEDVLDD--LLPPADALPSRLHEAMRYAVLGGGKRVRAALVYAAGQACP 65
Query: 117 LVG---GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAG 173
+ G ++ AA A+E+IH SL+HDDLP +D+D RR +P +H F E+TA+LAG
Sbjct: 66 VSGSVLAVQASLDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTTHVKFDEATAMLAG 125
Query: 174 DALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELE 233
DAL LA + +A ++P +V+A + A G +G+ G+ +D+ S G +S EL+
Sbjct: 126 DALQPLAFDLLASMP--IAPALIVQATQSLARAAGSQGMAGGQAIDLFSVGHALSRDELQ 183
Query: 234 YIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELG 293
+H KT +L +V G ++ G ++ + + YA+ +GL FQVVDDILDVT S LG
Sbjct: 184 TMHSMKTGAMLACSVALGGIVAGASSASRQALDAYAQAVGLAFQVVDDILDVTADSTSLG 243
Query: 294 KTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
KT GKD A K TY L+G++ A++FA EL A+ LA + L LA++I R
Sbjct: 244 KTPGKDAAENKPTYVSLLGLDGARAFAQELREDALAALAPL-GEAGSRLAELADFIVLR 301
>gi|171320202|ref|ZP_02909262.1| Polyprenyl synthetase [Burkholderia ambifaria MEX-5]
gi|171094554|gb|EDT39608.1| Polyprenyl synthetase [Burkholderia ambifaria MEX-5]
Length = 294
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 128/297 (43%), Positives = 177/297 (59%), Gaps = 11/297 (3%)
Query: 62 FPFEEYMIRKAEQVNKALD-----EAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCE 116
FE++M ++V AL E VV P ++H+AMRY++L GGKRVRPLLC A+ E
Sbjct: 1 MTFEQWMRSVLDRVEDALGHYLPAENVV---PTQLHEAMRYAVLGGGKRVRPLLCHAAGE 57
Query: 117 LVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDAL 176
L G E+ AA ALEMIH SL+HDD+P +D+D RR KP H + E TA+L GDAL
Sbjct: 58 LTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDAL 117
Query: 177 LSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIH 236
S A + A +SP + + E+ A G G+ G+ +D+AS G ++ ++LE +H
Sbjct: 118 QSQAFVALTDGDA-LSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMH 176
Query: 237 VHKTAKLLEAAVVCGAVIGGGNAIEVERVRN-YARCIGLLFQVVDDILDVTKSSEELGKT 295
KT LL AAV GA+ G + E + YA +GL FQVVDDILDVT S LGKT
Sbjct: 177 RMKTGALLRAAVRMGALAGDPPSAETLAALDVYAGAVGLAFQVVDDILDVTTDSATLGKT 236
Query: 296 AGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
AGKD A+ K TY ++G++ ++ A +L +A + L F A +A L LA+ + +R
Sbjct: 237 AGKDAANDKPTYVSILGLDASRELAAQLRAEAHDALKPFGA-RAQRLAELADLVVNR 292
>gi|421874465|ref|ZP_16306069.1| farnesyl diphosphate synthase [Brevibacillus laterosporus GI-9]
gi|372456509|emb|CCF15618.1| farnesyl diphosphate synthase [Brevibacillus laterosporus GI-9]
Length = 298
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/296 (42%), Positives = 180/296 (60%), Gaps = 5/296 (1%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQP-PVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
+F ++Y+ K + L A+ + P +++++M YSL+AGGKR+RP+L +A E
Sbjct: 2 SFRLKDYLNEKIALLEAELPRALSTEGVPSELYESMHYSLMAGGKRLRPILVLAVLEAFQ 61
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
+P A ALEMIHT SLIHDDLP +D+D+ RR KP +H+VFGE+TAILAGDALL+
Sbjct: 62 QPIERGLPYAIALEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDALLTR 121
Query: 180 ALEHVA---VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIH 236
A VA V+ V + V+ IAE+ G G+V G+ DI EGK +SL++LEYIH
Sbjct: 122 AFGLVASSYVHHPEVKAETTVQLIAELGQRAGERGMVGGQMADIMGEGKQLSLEQLEYIH 181
Query: 237 VHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTA 296
+HKT LL AA+ G + +++ + NYA IGL FQ+ DDIL+V + LGK
Sbjct: 182 LHKTGDLLIAALRGGGYLAEATPKQLQALTNYAVKIGLAFQIKDDILNVEGDAALLGKAV 241
Query: 297 GKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
G D + KATYP L+G+ +K L+ +A EL + + A L+ LA Y+ R
Sbjct: 242 GSDASKEKATYPALLGLAESKRRLALLVKEAQAELVAVKINHPA-LFALAEYVMER 296
>gi|398879895|ref|ZP_10634976.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM67]
gi|398195213|gb|EJM82264.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM67]
Length = 295
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/286 (45%), Positives = 182/286 (63%), Gaps = 7/286 (2%)
Query: 74 QVNKALDEAVVLQPP--VKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACA 131
+VN AL+ P ++++AMRYS++ GGKRVRPLL A+CE +GG A AACA
Sbjct: 12 RVNAALETLFNAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGKPEQANGAACA 71
Query: 132 LEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGV 191
+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA + ++
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAFSAL-LDPRLS 130
Query: 192 SPDRVVR--AIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVV 249
S D +R ++ + A G G+V G+ +D+ S G + K LEY+H HKT L+EA+V
Sbjct: 131 SSDAEIRLQMVSALALAAGPAGMVGGQAIDLGSVGLKLDQKALEYMHRHKTGALIEASVK 190
Query: 250 CGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYP 308
GA+ G E++ ++ YA+ IGL FQV DDILDV +E LGK G D+A K TYP
Sbjct: 191 LGALASGRAEKDELKSLQTYAQAIGLAFQVQDDILDVESDTETLGKRQGADIARDKPTYP 250
Query: 309 KLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L+G++ AK++A EL QA+ L F+A+ A PL LA YI R++
Sbjct: 251 ALLGLDAAKAYALELRDQALHALRPFDAA-AEPLRDLARYIVERRS 295
>gi|431931138|ref|YP_007244184.1| geranylgeranyl pyrophosphate synthase [Thioflavicoccus mobilis
8321]
gi|431829441|gb|AGA90554.1| geranylgeranyl pyrophosphate synthase [Thioflavicoccus mobilis
8321]
Length = 298
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/301 (40%), Positives = 180/301 (59%), Gaps = 5/301 (1%)
Query: 55 TDIPLPTFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIAS 114
TD PL TF + R +++ L +A + P ++H AMRY+ L GGKR+RP+L A+
Sbjct: 2 TDSPLATFT-AQCQARVEAALDRCLPKAEI--QPGQLHAAMRYAALGGGKRIRPILAYAA 58
Query: 115 CELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGD 174
+ +G ACA+E+IH SLIHDDLP +D+D+ RR + H+ F E+TAILAGD
Sbjct: 59 AQAIGLAPERVNAPACAVELIHAYSLIHDDLPAMDDDDLRRGRLTCHKAFDEATAILAGD 118
Query: 175 ALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEY 234
AL +LA + + G+S + + + + A G G+V G+ +D+A+EG+ + LE
Sbjct: 119 ALQTLAFQTL-TTAEGLSIEARLAMVDTLARAAGSRGMVGGQAMDLAAEGQTLDRVSLES 177
Query: 235 IHVHKTAKLLEAAV-VCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELG 293
IH+HKT L+ AAV + + G + +R+ +YA+C+GL FQ+ DDILDV + +G
Sbjct: 178 IHIHKTGALIRAAVQMATQALPGLDPEIAQRLDHYAKCLGLAFQIRDDILDVEGETAVIG 237
Query: 294 KTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
KT GKD KATYP L+G+ AK A L+ A E LA + APL +LA+Y+ R
Sbjct: 238 KTQGKDQTQAKATYPALLGLAGAKEAAATLIDDAHESLAALDPQATAPLRWLADYMVQRD 297
Query: 354 N 354
+
Sbjct: 298 H 298
>gi|330812001|ref|YP_004356463.1| geranyltranstransferase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423699564|ref|ZP_17674054.1| geranyltranstransferase [Pseudomonas fluorescens Q8r1-96]
gi|327380109|gb|AEA71459.1| geranyltranstransferase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|387996521|gb|EIK57851.1| geranyltranstransferase [Pseudomonas fluorescens Q8r1-96]
Length = 295
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/292 (43%), Positives = 180/292 (61%), Gaps = 5/292 (1%)
Query: 67 YMIRKAEQVNKALDEAVVLQPP--VKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW 124
Y +VN AL+ P ++++AMRYS++ GGKRVRPLL A+CE +GG
Sbjct: 5 YQASSQARVNAALETLFSAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGQAEQ 64
Query: 125 AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV 184
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA +
Sbjct: 65 ANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKQFDEACAILAGDGLQSLAFTAL 124
Query: 185 AVNIAGVSPDRV-VRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
P +V + ++ + A G G+V G+ +D+ S G + LEY+H HKT L
Sbjct: 125 LDPALSDCPAQVRLDMVSALALAAGPAGMVGGQAIDLGSVGLKLDQSALEYMHRHKTGAL 184
Query: 244 LEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
+EA+V GA+ G +++ ++ YAR IGL FQV DDILDV ++ LGK G D+A
Sbjct: 185 IEASVRLGALASGRATPAQLQALQTYARAIGLAFQVQDDILDVESDTQTLGKRQGADIAR 244
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TYP L+G++ AK++A EL QA+ L F+A+ A PL LA YI R++
Sbjct: 245 DKPTYPALLGLDAAKAYALELRDQALAALRPFDAA-AEPLRDLARYIVERRS 295
>gi|285019214|ref|YP_003376925.1| geranylgeranyl pyrophosphate synthase [Xanthomonas albilineans GPE
PC73]
gi|283474432|emb|CBA16933.1| putative geranylgeranyl pyrophosphate synthase protein [Xanthomonas
albilineans GPE PC73]
Length = 293
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/292 (41%), Positives = 168/292 (57%), Gaps = 4/292 (1%)
Query: 65 EEYMIRKAEQVNKALDEAV--VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
E R ++V LD + + Q P ++H AMR++ L GGKR+RPLL AS L G D
Sbjct: 4 EAVFARWRQRVEAGLDAHLPAIAQAPQRLHAAMRHATLGGGKRMRPLLVYASGALFGTDP 63
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
+ A A+E+IH SL+HDDLP +D+D RR +P H F E+TAILAGDAL SLA E
Sbjct: 64 ARLDAPALAVELIHAYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQSLAFE 123
Query: 183 HVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAK 242
+A A + R V+ + + A G G+ G+ +DI + G L +L+ +H KT
Sbjct: 124 LLAKADAADATLR-VQWLQTLAEATGAAGMCGGQALDIDATGIVQPLADLQRMHALKTGA 182
Query: 243 LLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
L+ A+V GA+ GG + + + +A +GL FQ+ DDILDV SSE+LGKTAGKD
Sbjct: 183 LIRASVRLGALGGGADHAALNHLDAFASALGLAFQIRDDILDVEASSEQLGKTAGKDATQ 242
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K+TYP L+G++ AK+ EL + L + A A PL LA R +
Sbjct: 243 AKSTYPALLGMDGAKAKLAELAHTMRDSLHDYGA-HADPLAALAQLAVDRAH 293
>gi|415768812|ref|ZP_11483966.1| farnesyl-diphosphate synthase [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|348657658|gb|EGY75244.1| farnesyl-diphosphate synthase [Aggregatibacter
actinomycetemcomitans D17P-2]
Length = 296
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/297 (42%), Positives = 181/297 (60%), Gaps = 6/297 (2%)
Query: 62 FPFEEYMIRKAEQVNKALDE--AVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
+ F + + +++N L + A + P + +AM+Y LL GGKR+RP L A+ +++G
Sbjct: 2 YHFSQDLQHVQQRINHFLAKQFAHIDSAPAPLAEAMKYGLLLGGKRIRPFLVYATGKMLG 61
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
D + AA A+E IH SLIHDDLP +D+DE RR H F E+TAILAGDAL +L
Sbjct: 62 ADMAHLDYAAAAIEAIHAYSLIHDDLPAMDDDELRRGHQTCHIAFDEATAILAGDALQTL 121
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A E + +I +S ++ + I + +A GV+G+ G+ +D+ SE K +SL+ELE IH++K
Sbjct: 122 AFE-ILTDIPHLSAEQKLMLIKTLSAAAGVKGMCLGQSLDLISEQKIISLQELEQIHLNK 180
Query: 240 TAKLLEAAVVCGAVIGG--GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
T LL AA+ G + +A +++ YA IGL FQV DDILD+ S LGKT G
Sbjct: 181 TGALLTAALKMGFICSPHFADAALAQQLERYATAIGLAFQVQDDILDIEGDSATLGKTTG 240
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
DL + K+TYPKL+G+E AK A EL +A+ EL + A LY LA +I R++
Sbjct: 241 SDLTADKSTYPKLLGLEGAKQKALELYERALTELKNLPFNTTA-LYALAEFIVKRKS 296
>gi|254447158|ref|ZP_05060625.1| geranyltranstransferase [gamma proteobacterium HTCC5015]
gi|198263297|gb|EDY87575.1| geranyltranstransferase [gamma proteobacterium HTCC5015]
Length = 297
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/296 (42%), Positives = 176/296 (59%), Gaps = 6/296 (2%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVV--LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
F++ + E+VN ++ + Q P +H AM YS GGKRVRPLLC A+ E +G
Sbjct: 1 MDFKQALAHYQERVNATIERYLPDPQQAPEALHSAMHYSATGGGKRVRPLLCYATAEALG 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
AA ALE+IH SL+HDDLP +D+D+ RR + H F E+TAILAGDAL +L
Sbjct: 61 QSAEQVDGAAAALELIHAYSLVHDDLPAMDDDDLRRGQATCHIAFDEATAILAGDALQTL 120
Query: 180 ALEHVAVNIAGV-SPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
A + +A + A P R +RA+ + SA GV+G+V G+ +DIA+EG+ ++L +L+ +H
Sbjct: 121 AFDILASDQALTDDPARRLRAVKVLASASGVDGMVGGQAIDIAAEGQQLTLDQLKRMHAL 180
Query: 239 KTAKLLEAAVVCGAVIGG--GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTA 296
KT L+ A+V A + G N +R+ YA CIGL FQ+ DDILDV ++ LGKT
Sbjct: 181 KTGALIRASVQISAALAGEAENGDTYQRLSRYAECIGLAFQIRDDILDVISDTQTLGKTQ 240
Query: 297 GKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
G D A K TY L+G+E AK A + +AI L F +A L +A+YI R
Sbjct: 241 GADEAHNKPTYTSLLGLEGAKQHAIDTHAEAIACLEPF-GERAQLLKNIADYIVER 295
>gi|184155736|ref|YP_001844076.1| geranyltranstransferase [Lactobacillus fermentum IFO 3956]
gi|227515672|ref|ZP_03945721.1| geranyltranstransferase [Lactobacillus fermentum ATCC 14931]
gi|260663547|ref|ZP_05864437.1| geranyltranstransferase [Lactobacillus fermentum 28-3-CHN]
gi|183227080|dbj|BAG27596.1| geranyltranstransferase [Lactobacillus fermentum IFO 3956]
gi|227085975|gb|EEI21287.1| geranyltranstransferase [Lactobacillus fermentum ATCC 14931]
gi|260552088|gb|EEX25141.1| geranyltranstransferase [Lactobacillus fermentum 28-3-CHN]
Length = 291
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/234 (47%), Positives = 150/234 (64%), Gaps = 6/234 (2%)
Query: 91 IHKAMRYSLLAGGKRVRPLLCIASCELVGGD-ESWAMPAACALEMIHTMSLIHDDLPFLD 149
+ K+M YSLLAGGKR+RP L IA EL+G + + AACALE+IHT SLIHDDLP +D
Sbjct: 29 LEKSMAYSLLAGGKRLRPTLTIAVAELLGKTIDDDLVRAACALELIHTYSLIHDDLPAMD 88
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGV 209
ND+ RR KP +H V+G A LAGD LL+LA E V+ N +P R+ R + E+ A G
Sbjct: 89 NDDLRRGKPTNHRVYGPGVATLAGDGLLTLAFEWVSDNQLK-APVRL-RLVQELAKAAGP 146
Query: 210 EGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYA 269
G+VAG+ D+++ G+++SL +L+ +H KT LL AV+ G +I ++ + +
Sbjct: 147 AGMVAGQATDVSATGQELSLAQLKKLHRQKTGALLRYAVLAGGLIAEQETAVLDCLTTFG 206
Query: 270 RCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
GL FQ+ DDILDVT ++ E+GK KD A K TYP L+G+ AK GEL
Sbjct: 207 EAYGLAFQIYDDILDVTATTAEMGKATHKDQAEQKNTYPGLLGLAGAK---GEL 257
>gi|241760634|ref|ZP_04758726.1| geranyltranstransferase [Neisseria flavescens SK114]
gi|241318815|gb|EER55341.1| geranyltranstransferase [Neisseria flavescens SK114]
Length = 298
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/270 (40%), Positives = 166/270 (61%), Gaps = 3/270 (1%)
Query: 86 QPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDL 145
Q P +H+AMRY L GGKR+RPLL +A+ EL +++ A A+EM+H SL+HDD+
Sbjct: 31 QVPHTLHEAMRYVTLGGGKRLRPLLVLAASELGEANQNAVEQAMAAIEMVHVYSLVHDDM 90
Query: 146 PFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCS 205
P +DND RR KP H + E+TA+L GDAL + A + V G+S +R + ++ +
Sbjct: 91 PAMDNDSLRRGKPTCHVQYDEATALLVGDALQTQAFD-VLSRPTGLSAERQLAMLSTLAQ 149
Query: 206 AMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAV-IGGGNAIEVER 264
A G G+ G+ +D+A+ GK ++ ELE +H KT L+ AAV GA+ +++
Sbjct: 150 ASGSLGMAGGQAIDLANVGKAMNQAELEQMHSLKTGALIRAAVALGALSCPDLTPAQIQT 209
Query: 265 VRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELL 324
+ +YA +GL FQV+DD+LD + LGKTAGKD + K TY KLMG++ A+++A L+
Sbjct: 210 LDHYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDSDNDKPTYVKLMGLQAARTYAETLI 269
Query: 325 GQAIEELAYFEASKAAPLYFLANYIASRQN 354
+A+ + F KA L LA ++ +R+N
Sbjct: 270 AEAVALIEPF-GDKALRLRQLAEFVTARKN 298
>gi|410472460|ref|YP_006895741.1| geranyltranstransferase [Bordetella parapertussis Bpp5]
gi|412338917|ref|YP_006967672.1| geranyltranstransferase [Bordetella bronchiseptica 253]
gi|427815400|ref|ZP_18982464.1| probable geranyltranstransferase [Bordetella bronchiseptica 1289]
gi|408442570|emb|CCJ49121.1| probable geranyltranstransferase [Bordetella parapertussis Bpp5]
gi|408768751|emb|CCJ53521.1| probable geranyltranstransferase [Bordetella bronchiseptica 253]
gi|410566400|emb|CCN23961.1| probable geranyltranstransferase [Bordetella bronchiseptica 1289]
Length = 303
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 177/300 (59%), Gaps = 21/300 (7%)
Query: 66 EYMIRKAEQVNKALDEAVVLQP-----PVKIHKAMRYSLLAGGKRVRPLLCIAS---CEL 117
+++ +A+ V LDE L P P ++H+AMRY++L GGKRVR L A+ C +
Sbjct: 10 DWLRERAQHVEHVLDE---LLPGADIAPTRLHEAMRYAVLGGGKRVRAALVYAAGQACPV 66
Query: 118 VGGDESWAMP---AACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGD 174
G + AA A+E+IH SL+HDDLP +D+D RR +P H F E+TA+LAGD
Sbjct: 67 NGSTLAVGASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAGD 126
Query: 175 ALLSLALEHVAVNIAG--VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKEL 232
AL LA E +AG ++P VV+A + A G +G+ G+ +D+ S G+ ++ EL
Sbjct: 127 ALQPLAFE----LLAGMPIAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDEL 182
Query: 233 EYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEEL 292
+ +H KT +L +V G ++ G ++ + + +YA+ IGL FQVVDDILDVT + L
Sbjct: 183 QTMHSMKTGAMLACSVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTASL 242
Query: 293 GKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
GKTAGKD A K TY L+G++ A++ A EL A + LA S A L LA++I R
Sbjct: 243 GKTAGKDAADNKPTYVSLLGLDQARALAQELRQAAHQALAPLGES-GARLGQLADFIVLR 301
>gi|398910221|ref|ZP_10654917.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM49]
gi|398186483|gb|EJM73857.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM49]
Length = 295
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/285 (44%), Positives = 179/285 (62%), Gaps = 5/285 (1%)
Query: 74 QVNKALDEAVVLQPP--VKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACA 131
+VN AL+ P ++++AMRYS++ GGKRVRPLL A+CE +GG A AACA
Sbjct: 12 RVNAALETLFTAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGKAEQANGAACA 71
Query: 132 LEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGV 191
+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA +
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAFSALLDPRLST 131
Query: 192 SPDRV-VRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVC 250
S + ++ ++ + A G G+V G+ +D+ S G + K LEY+H HKT L+E +V
Sbjct: 132 SQAEIRLQMVSALALAAGPAGMVGGQAIDLGSVGLKLDQKALEYMHRHKTGALIEVSVKL 191
Query: 251 GAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPK 309
GA+ G E++ ++ YA+ IGL FQV DDILDV +E LGK G D+A K TYP
Sbjct: 192 GALASGRAEKDELKSLQTYAQAIGLAFQVQDDILDVESDTETLGKRQGADIARDKPTYPA 251
Query: 310 LMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L+G++ AK++A EL QA+ L F+A+ A PL LA YI R++
Sbjct: 252 LLGLDAAKAYALELRDQALHALRPFDAA-AEPLRDLARYIVDRRS 295
>gi|395498975|ref|ZP_10430554.1| geranyltranstransferase [Pseudomonas sp. PAMC 25886]
Length = 295
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 130/295 (44%), Positives = 184/295 (62%), Gaps = 5/295 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPP--VKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
+ Y +VN AL+ V P ++++AMRYS++ GGKRVRPLL A+CE +G
Sbjct: 2 IDAYQAGSQARVNAALEPLFVAPTPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGAQ 61
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 62 AEEANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 182 EHVA-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKT 240
+ ++ V+ + +R + + A G G+V G+ +D+ S G + + LEY+H HKT
Sbjct: 122 SALLDPRLSSVNAEIRLRMVTALALAAGPAGMVGGQAIDLGSVGLKLDQQALEYMHRHKT 181
Query: 241 AKLLEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
L+EAAV GA+ G A ++ ++ YAR IGL FQV DDILDV + LGK G D
Sbjct: 182 GALIEAAVHLGALASGRAEAAQLAALQTYARAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+A K TYP L+G+E AK++A EL QA++ L F+A+ A PL LA YI R++
Sbjct: 242 IARDKPTYPSLLGLEAAKAYALELRDQALDALRPFDAA-AEPLRDLARYIVERRH 295
>gi|299822995|ref|ZP_07054881.1| geranyltranstransferase [Listeria grayi DSM 20601]
gi|299816524|gb|EFI83762.1| geranyltranstransferase [Listeria grayi DSM 20601]
Length = 293
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 177/295 (60%), Gaps = 7/295 (2%)
Query: 63 PFEEYMIRKAEQVNKAL---DEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
P E+++ + V++ L +A V+ P +K KAMRYSL AGGKR+RP+L A+ +
Sbjct: 3 PLEQFLKTSKQLVDEQLLAEVDARVITPTLK--KAMRYSLEAGGKRIRPILLFATLISLR 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
+ A ALEMIHT SLIHDDLP +DND+ RR K +H+VFG++TAILAGD LL+L
Sbjct: 61 TELEKGKKTAAALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGDATAILAGDGLLTL 120
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A ++ A + R V+ I G EG+VAG+ DI +E + V+L+EL IH K
Sbjct: 121 AFSLLSEEEALPAESR-VKLIQLFAEHAGPEGMVAGQQADIEAEDRSVTLEELAAIHRKK 179
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T LL++AV+ GA+I +A E++ YA IG+ FQ+ DDILDV ++LGK G D
Sbjct: 180 TGALLKSAVLAGAIIANADAETYEKLNIYADNIGVAFQIADDILDVVGDEQKLGKKIGMD 239
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K+TYP L+ + A+ + + +A E ++ + + L LA+ IA R +
Sbjct: 240 AIMHKSTYPGLLTLVGAQEALNDHVSRAKEAVSGLSLT-SNYLVELADLIAGRDH 293
>gi|226942935|ref|YP_002798008.1| geranyltranstransferase [Azotobacter vinelandii DJ]
gi|226944165|ref|YP_002799238.1| geranyltranstransferase [Azotobacter vinelandii DJ]
gi|226717862|gb|ACO77033.1| geranyltranstransferase [Azotobacter vinelandii DJ]
gi|226719092|gb|ACO78263.1| geranyltranstransferase [Azotobacter vinelandii DJ]
Length = 295
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/293 (44%), Positives = 178/293 (60%), Gaps = 21/293 (7%)
Query: 74 QVNKALDEAVVLQPP----VKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAA 129
+V+ AL+ +LQPP ++++AMRYS++ GGKRVRPLL A+CE +GG A AA
Sbjct: 12 RVDAALE--ALLQPPRAELQRLYQAMRYSVVNGGKRVRPLLVYAACEALGGTPERAEGAA 69
Query: 130 CALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIA 189
CA+E+IH SL+HDDLP +D+D+ RR +P +H F E+ AILAGD L +LA E +
Sbjct: 70 CAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEACAILAGDGLQALAFEVL----- 124
Query: 190 GVSPDRVVRAIA-------EMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAK 242
P R R + A G G+V G+ +D+ + G+ + LE +H HKT
Sbjct: 125 -TDPRRNPRDAGLRLEMSRTLARAAGPAGMVGGQAIDLEAVGRRLDRDALETMHRHKTGA 183
Query: 243 LLEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
L+EA+V GA+ G + ++ + YAR IGL FQV DDILDV + LGKT GKD A
Sbjct: 184 LIEASVRLGALASGRADETDLAALAVYARAIGLAFQVQDDILDVESDTATLGKTQGKDQA 243
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K TYP L+G+E AK++A L QA+ L F+A A PL LA YI R++
Sbjct: 244 NDKPTYPALLGLEAAKAYALALRDQALGALEGFDAG-ADPLRALARYIVERRH 295
>gi|261867966|ref|YP_003255888.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|261413298|gb|ACX82669.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Aggregatibacter actinomycetemcomitans D11S-1]
Length = 296
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/297 (42%), Positives = 181/297 (60%), Gaps = 6/297 (2%)
Query: 62 FPFEEYMIRKAEQVNKALDE--AVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
+ F + + +++N L + A + P + +AM+Y LL GGKR+RP L A+ +++G
Sbjct: 2 YNFSQDLQHVQQRINHFLAKQFAHIDSAPAPLAEAMKYGLLLGGKRIRPFLVYATGKMLG 61
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
D + AA A+E IH SLIHDDLP +D+DE RR H F E+TAILAGDAL +L
Sbjct: 62 ADMAHLDYAAAAIEAIHAYSLIHDDLPAMDDDELRRGHQTCHIAFDEATAILAGDALQTL 121
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A E + +I +S ++ + I + +A GV+G+ G+ +D+ SE K +SL+ELE IH++K
Sbjct: 122 AFE-ILTDIPHLSAEQKLMLIKTLSAAAGVKGMCLGQSLDLISEQKIISLQELEQIHLNK 180
Query: 240 TAKLLEAAVVCGAVIGG--GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
T LL AA+ G + +A +++ YA IGL FQV DDILD+ S LGKT G
Sbjct: 181 TGALLTAALKMGFICSPHFADAALAQQLERYATAIGLAFQVQDDILDIEGDSATLGKTTG 240
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
DL + K+TYPKL+G+E AK A EL +A+ EL + A LY LA +I R++
Sbjct: 241 SDLTADKSTYPKLLGLEGAKQKALELYERALTELKNLPFNTTA-LYALAEFIVKRKS 296
>gi|336323530|ref|YP_004603497.1| polyprenyl synthetase [Flexistipes sinusarabici DSM 4947]
gi|336107111|gb|AEI14929.1| Polyprenyl synthetase [Flexistipes sinusarabici DSM 4947]
Length = 299
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/300 (40%), Positives = 186/300 (62%), Gaps = 5/300 (1%)
Query: 59 LPTFPFEEYMIRKAEQVNKALDEAV--VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCE 116
+ TF ++YM A++ L + + + +AMRYSLLAGGKR+RP+L +S
Sbjct: 1 MTTFNLKKYMKFWAQKTENWLKTNLSSFDKNTEGLTEAMRYSLLAGGKRLRPVLIYSSYG 60
Query: 117 LVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDAL 176
+ D +P A A+EM+HT SLIHDDLP +D+D+ RR P +H++FGE+TAILAGDAL
Sbjct: 61 IFDNDFDKVVPYAAAVEMLHTYSLIHDDLPAMDDDDYRRGNPTNHKMFGEATAILAGDAL 120
Query: 177 LSLALEHVAVNIAGVSPDRVVR--AIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEY 234
L+ A E + + + +R A ++ A G G++AG+FVD+ SE + ++L++
Sbjct: 121 LTKAFEVMLDPVINPETEEKLRCEAALKLAKAGGDRGMIAGQFVDVESENSYFTAEKLDF 180
Query: 235 IHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGK 294
IH +KTA LL G V+G G + ER++ + IGL FQ+VDD+LD++ ++E+LGK
Sbjct: 181 IHNYKTAALLGYCTELGTVLGYGGEEDKERLKRFGINIGLAFQIVDDLLDISATTEQLGK 240
Query: 295 TAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
AG DL GKATYP L G++ +K A L+ +++ + + A+ + PL +A ++ R N
Sbjct: 241 DAGSDLKKGKATYPGLYGVDESKKKARALIDESVALVDCYGAA-SRPLAEIARFVIDRNN 299
>gi|220904228|ref|YP_002479540.1| polyprenyl synthetase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868527|gb|ACL48862.1| Polyprenyl synthetase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 298
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/298 (41%), Positives = 185/298 (62%), Gaps = 8/298 (2%)
Query: 59 LPTFPFEEYMIRKAEQVNKALDEAVVLQP---PVKIHKAMRYSLLAGGKRVRPLLCIASC 115
+P +E + + + V + L AV L P ++ +M YSL AGGKR+RP+LC+++
Sbjct: 3 MPVSRMKELLRERGQMVEEEL--AVCLDGRAVPQRLKDSMLYSLQAGGKRLRPVLCLSAA 60
Query: 116 ELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDA 175
L G A+P A A+EMIHT SL+HDDLP +D+D+ RR KP++H+ F E+TAILAGD
Sbjct: 61 ALCGLPLRDALPFASAIEMIHTYSLVHDDLPAMDDDDLRRGKPSNHKAFDEATAILAGDG 120
Query: 176 LLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKD-VSLKELEY 234
LL+ A + + + ++P RV+RAI+E+ A G G+V G+ D+ GKD VS+++L
Sbjct: 121 LLTDAF--LMMCRSPLAPPRVLRAISELALAAGSSGMVGGQEWDMIFTGKDLVSIEDLRG 178
Query: 235 IHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGK 294
IH KT LL A+ VCGA++ G + ++ + +Y +G+ FQ+ DDILDV + LGK
Sbjct: 179 IHAMKTGALLRASCVCGAMLAGASDEDLAAIGSYGAALGVAFQIADDILDVVADTATLGK 238
Query: 295 TAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
G D A GK TYP L+G++ +++ A E +A LA F +A L LA+Y +R
Sbjct: 239 PVGSDAAQGKKTYPALLGLDQSRALAREQAEKAKAALAGFSGDEADFLRALADYTVTR 296
>gi|406878658|gb|EKD27503.1| hypothetical protein ACD_79C00693G0001, partial [uncultured
bacterium]
Length = 246
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 153/248 (61%), Gaps = 2/248 (0%)
Query: 107 RPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGE 166
RP+LC+ S EL + ACALE++HT +LIHDDLP +DND+ RR KP H+ F E
Sbjct: 1 RPILCLLSAELFAEPSQNVINCACALELLHTYTLIHDDLPCMDNDDFRRGKPTCHKAFPE 60
Query: 167 STAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKD 226
S A+LAGDALL+L + +A N P++ +R I+++ G +G++ G+ +DI +E K
Sbjct: 61 SIALLAGDALLTLCFQIIADNTKNC-PEKGIRIISDLAELTGSKGVIGGQVLDIINENKP 119
Query: 227 VSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVT 286
++ +EL IH++KTAKL+ A+V GA++ E+E + Y IG FQ+ DDILD
Sbjct: 120 ITPEELSEIHINKTAKLISASVRMGAILMNAAESELEMITKYGLLIGEAFQIADDILDEI 179
Query: 287 KSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLA 346
S +LGK G+DL K+T+PK GI+ +K + + A+ L F KA L +A
Sbjct: 180 GDSAKLGKNTGQDLKLNKSTFPKFFGIDKSKQILFDKINSAVACLNQF-GKKAESLNQIA 238
Query: 347 NYIASRQN 354
++I +R+N
Sbjct: 239 HFIGTREN 246
>gi|308174223|ref|YP_003920928.1| geranyltranstransferase [Bacillus amyloliquefaciens DSM 7]
gi|384160080|ref|YP_005542153.1| geranyltranstransferase [Bacillus amyloliquefaciens TA208]
gi|384165005|ref|YP_005546384.1| geranyltranstransferase [Bacillus amyloliquefaciens LL3]
gi|384169144|ref|YP_005550522.1| geranyltranstransferase [Bacillus amyloliquefaciens XH7]
gi|307607087|emb|CBI43458.1| geranyltranstransferase [Bacillus amyloliquefaciens DSM 7]
gi|328554168|gb|AEB24660.1| geranyltranstransferase [Bacillus amyloliquefaciens TA208]
gi|328912560|gb|AEB64156.1| geranyltranstransferase [Bacillus amyloliquefaciens LL3]
gi|341828423|gb|AEK89674.1| putative geranyltranstransferase [Bacillus amyloliquefaciens XH7]
Length = 296
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/271 (42%), Positives = 173/271 (63%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
L P + K+M YSL AGGKR+RPL+ +A G DE +P CA+EMIHT SLIHDD
Sbjct: 27 LDMPESLKKSMLYSLEAGGKRLRPLVVLAVLNAYGKDEKDGIPVGCAVEMIHTYSLIHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIA-GVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ + + + +++ VS ++ +R + E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAAAVLAGDGLLTESFKLITSHVSEEVSAEKRLRLVDEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
SA G EG+V G+ D+ +E K V+LKELE IH KTAKLL +V GA++ E+E
Sbjct: 147 ISAAGTEGMVGGQAADMEAEQKQVTLKELESIHERKTAKLLGFSVTAGAILADAPEDEIE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++R ++ IG+ FQ+ DDILD+ E++GK G D + K+TYP L+ +E AK
Sbjct: 207 KLRLFSSHIGIGFQIRDDILDIEGHEEKIGKPVGSDTTNEKSTYPSLLTLEGAKEKLAHH 266
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A + ++ K L+ L + IA+R +
Sbjct: 267 ISEAKQIVSGLSLEKEL-LHDLCDLIAARDH 296
>gi|295700827|ref|YP_003608720.1| polyprenyl synthetase [Burkholderia sp. CCGE1002]
gi|295440040|gb|ADG19209.1| Polyprenyl synthetase [Burkholderia sp. CCGE1002]
Length = 293
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/294 (42%), Positives = 174/294 (59%), Gaps = 6/294 (2%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
FE++ E+V AL+ + + P K+H+AMRY++L GGKRVRPLLC A+ EL G
Sbjct: 1 MTFEQWTRSVLERVETALEHYLPAETTEPAKLHEAMRYAVLGGGKRVRPLLCHAAGELTG 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
AA ALEMIH SL+HDD+P +D+DE RR KP H + E+TA+L GDAL S
Sbjct: 61 ARAERLDAAAAALEMIHVYSLVHDDMPCMDDDELRRGKPTVHVKYDEATALLVGDALQSQ 120
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A + ++ G P + + E+ A G G+ G+ +D+AS G ++ LE +H K
Sbjct: 121 AFVVLTSDVLG-QPQQAA-LVRELALASGSVGMCGGQAIDLASVGHTLTRPRLETMHRMK 178
Query: 240 TAKLLEAAVVCGAVIGGG-NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
T LL AAV GA+ G +A + + YA +GL FQVVDDILDVT S LGKTAGK
Sbjct: 179 TGALLRAAVRMGALAGETPDAQALASLDAYAAAVGLAFQVVDDILDVTTDSATLGKTAGK 238
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
D GK TY ++G++ +++ A +L A LA F A +A L LA+ + +R
Sbjct: 239 DAKDGKPTYVSIIGLDASRALAAQLRSDAHAALAPFGA-RAQRLAELADLVVNR 291
>gi|372276416|ref|ZP_09512452.1| IspA [Pantoea sp. SL1_M5]
Length = 299
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/286 (42%), Positives = 166/286 (58%), Gaps = 6/286 (2%)
Query: 73 EQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAAC 130
+QVN AL + P + AM Y L GGKR+RP L A+ E++ D + A
Sbjct: 12 QQVNAALTRFIEPLPFQSSPLVNAMHYGALLGGKRLRPFLVYATGEMLHADPASLDAPAA 71
Query: 131 ALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVN-IA 189
A+E IH SLIHDDLP +D+D RR +P H +GE TAILAGDAL +LA +A +
Sbjct: 72 AVECIHAYSLIHDDLPAMDDDALRRGQPTCHIKYGEDTAILAGDALQTLAFSILADQAMP 131
Query: 190 GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVV 249
GVS + + ++E+ A GV G+ G+ +D+A+EGK V L +LE IH HKT L+ +AV
Sbjct: 132 GVSAEYRLMMLSELAKASGVAGMCGGQALDLAAEGKSVDLDQLEQIHRHKTGALIRSAVR 191
Query: 250 CGAVIGGGNAIE-VERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYP 308
GA+ G E + + YA IGL FQV DDILDV + +GK G D GK+TYP
Sbjct: 192 LGALTAGDAGREALPLLDRYAEAIGLAFQVQDDILDVIGDTAVIGKRQGADQHLGKSTYP 251
Query: 309 KLMGIENAKSFAGELLGQAIEELAYFEAS--KAAPLYFLANYIASR 352
L+G+ENA++ A +L +A++ L A L LA++I R
Sbjct: 252 SLLGLENAQAKARDLYQEALDTLEMLAAHSYNTTALQALASFIIER 297
>gi|375309124|ref|ZP_09774405.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus sp. Aloe-11]
gi|375078433|gb|EHS56660.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus sp. Aloe-11]
Length = 307
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/295 (40%), Positives = 177/295 (60%), Gaps = 4/295 (1%)
Query: 64 FEEYMIRKAEQVNKALDEA--VVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F+EY+ A+ V+ AL E P + ++M YSL AGGKR+RPLL IA+ E GG
Sbjct: 13 FKEYLNGTADAVSSALTEQFPAHWNIPAVLRESMNYSLTAGGKRLRPLLVIAAAEAFGGS 72
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
A+P ACA+EM+HT SLIHDDLP +D+D+ RR K +H+V+GE+ AILAGDALL+ A
Sbjct: 73 REAALPVACAVEMVHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEAVAILAGDALLTHAF 132
Query: 182 EHV--AVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
V A GVS D ++ + E+ G G+V G+ D++ E ++ELEYIH+HK
Sbjct: 133 YSVVQAGRRHGVSSDALLSIVEELSEMSGARGMVGGQVADMSGEQGLTGIEELEYIHLHK 192
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
TA L+ +++ G IGG + ++E +R + R +GL FQ+ DDILD+ ++GK D
Sbjct: 193 TADLIIFSLLAGGRIGGADKNQLEALRQFGRDLGLAFQIQDDILDLIGDESKMGKKTQSD 252
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K TYP +G+E ++ +L A + L ++ L +A+Y+ R +
Sbjct: 253 VEQEKVTYPFFIGMEASQQQVEKLTASAKKALIEGGIPDSSRLLEIADYLMKRDH 307
>gi|118443490|ref|YP_878055.1| geranyltranstransferase [Clostridium novyi NT]
gi|118133946|gb|ABK60990.1| geranyltranstransferase [Clostridium novyi NT]
Length = 289
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/247 (39%), Positives = 155/247 (62%), Gaps = 1/247 (0%)
Query: 91 IHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDN 150
++ AM+YS+ GGKR+RP L + + + + MP ACA+EMIHT SLIHDDLP +DN
Sbjct: 28 VYDAMKYSVEVGGKRIRPTLMLCTYNVYKDNYKDIMPMACAIEMIHTYSLIHDDLPAMDN 87
Query: 151 DERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVE 210
D+ RR KP +H+VFGE+ AILAGD LL+ A+ ++ N + + R ++A + A GVE
Sbjct: 88 DDLRRGKPTNHKVFGEAMAILAGDGLLNEAM-NIMFNYSLNNDIRALKASKIISEASGVE 146
Query: 211 GLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYAR 270
G++ G+ VDI SEGK +++ L+Y+H +KT KL+++ ++ GA++G +++ + +
Sbjct: 147 GMIGGQVVDIISEGKKITIDNLKYMHKNKTGKLIKSPIIAGAILGNAPKEDIDILEEFGE 206
Query: 271 CIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEE 330
+GL FQ+ DDILDV + LGK KD + K T+ G+E+ K +L + +
Sbjct: 207 KLGLAFQIKDDILDVIGDVKVLGKEIHKDKENNKTTFISEFGLESCKKMCIDLTKECLNL 266
Query: 331 LAYFEAS 337
L + +
Sbjct: 267 LKQIQGN 273
>gi|332288106|ref|YP_004418958.1| putative geranyltranstransferase [Gallibacterium anatis UMN179]
gi|330431002|gb|AEC16061.1| putative geranyltranstransferase [Gallibacterium anatis UMN179]
Length = 295
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 118/269 (43%), Positives = 161/269 (59%), Gaps = 5/269 (1%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPF 147
P + AMRYSLL GGKR+RP L A+ ++G D + A A+E IH SLIHDDLP
Sbjct: 30 PAPLADAMRYSLLLGGKRIRPFLVYATGRMLGVDLAKLDHIAGAIECIHCYSLIHDDLPA 89
Query: 148 LDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAM 207
+DND RR+ P H F E+TAILAGDAL S A E +A + ++ + + + +A
Sbjct: 90 MDNDTLRRNNPTCHIAFDEATAILAGDALQSYAFELLAK--SPIADQQKILQFQLLANAS 147
Query: 208 GVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGG--GNAIEVERV 265
G EG+ G+ +D+ SE K + L ELE IH +KT L+ AAV+ G N +++
Sbjct: 148 GAEGMCLGQSLDLISENKQIGLAELERIHKNKTGALITAAVLLGFYCSSYYQNEQIKQKL 207
Query: 266 RNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLG 325
+++ IGL FQV DDILD+T S+EELGK AG DL + K+TYP+L+G+ AK A L
Sbjct: 208 ISFSAAIGLAFQVQDDILDITSSNEELGKNAGSDLKAHKSTYPQLLGLAQAKEKASALYY 267
Query: 326 QAIEELAYFEASKAAPLYFLANYIASRQN 354
A L+ E +A L LA +I R+N
Sbjct: 268 SAKSILSELEFDTSA-LAALAEFIVKRRN 295
>gi|398874775|ref|ZP_10629975.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM74]
gi|398193998|gb|EJM81083.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM74]
Length = 295
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/292 (43%), Positives = 182/292 (62%), Gaps = 5/292 (1%)
Query: 67 YMIRKAEQVNKALDEAVVLQPP--VKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW 124
Y +VN AL+ P ++++AMRYS++ GGKRVRPLL A+CE +GG
Sbjct: 5 YSASSQARVNAALETLFTAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGKAEQ 64
Query: 125 AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV 184
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA +
Sbjct: 65 ANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAFSAL 124
Query: 185 A-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
++ + + ++ ++ + A G G+V G+ +D+ S G + K LEY+H HKT L
Sbjct: 125 LDPRLSTLDTEIHLQMVSALALAAGPAGMVGGQAIDLGSVGLKLDQKALEYMHRHKTGAL 184
Query: 244 LEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
+E +V GA+ G E++ ++ YA+ IGL FQV DDILDV +E LGK G D+A
Sbjct: 185 IEVSVKLGALASGRAEKDELKSLQTYAQAIGLAFQVQDDILDVESDTETLGKRQGADIAR 244
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TYP L+G++ AK++A EL QA+ L F+A+ A PL LA YI R++
Sbjct: 245 DKPTYPALLGLDAAKAYALELRDQALHALRPFDAA-AEPLRDLARYIVDRRS 295
>gi|332524231|ref|ZP_08400457.1| farnesyl-diphosphate synthase [Rubrivivax benzoatilyticus JA2]
gi|332107566|gb|EGJ08790.1| farnesyl-diphosphate synthase [Rubrivivax benzoatilyticus JA2]
Length = 296
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/294 (40%), Positives = 175/294 (59%), Gaps = 1/294 (0%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
T F+++ R+ + V AL+ V P + +AMRY +L GGKR+RPLL +A+CE +GG
Sbjct: 4 TLNFDQWARRQLDAVEAALEAWVPDNAPAGLGEAMRYGVLDGGKRLRPLLVMAACEALGG 63
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
A+ +ACA+E+IH SL+HDD+P +DND RR KP H +GE+ A+LAGDA+ +LA
Sbjct: 64 SREAALRSACAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVKYGEAQAMLAGDAMQALA 123
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKT 240
E + + GV P + + A G G+ G+ +D+A+ G+ + L +H KT
Sbjct: 124 FEILTPD-EGVEPALQASLVRLLARAAGHAGMAGGQAIDLANTGRLLDEATLREMHRKKT 182
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
LL +V GA G + + Y IGL FQVVDDILD T++S++LGKTAGKDL
Sbjct: 183 GALLLVSVQMGAACGSPAPATWQALSEYGEAIGLAFQVVDDILDCTQASDKLGKTAGKDL 242
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K TY ++G+E A+ +A EL QA LA + A L +A+ + R+N
Sbjct: 243 EANKPTYVSVLGLEPARRYAQELRTQAHAALARAGLADGAALAAIADKVVEREN 296
>gi|134292965|ref|YP_001116701.1| farnesyl-diphosphate synthase [Burkholderia vietnamiensis G4]
gi|387904757|ref|YP_006335095.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Burkholderia
sp. KJ006]
gi|134136122|gb|ABO57236.1| farnesyl-diphosphate synthase [Burkholderia vietnamiensis G4]
gi|387579649|gb|AFJ88364.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Burkholderia
sp. KJ006]
Length = 294
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/299 (43%), Positives = 179/299 (59%), Gaps = 15/299 (5%)
Query: 62 FPFEEYMIRKAEQVNKAL------DEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASC 115
FE++M ++V AL D V P ++H+AMRY++L GGKRVRPLLC A+
Sbjct: 1 MTFEQWMRSVLDRVEDALGHYLPADNVV----PTQLHEAMRYAVLGGGKRVRPLLCHAAG 56
Query: 116 ELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDA 175
EL G E+ AA ALEMIH SL+HDD+P +D+D RR KP H + E TA+L GDA
Sbjct: 57 ELTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDA 116
Query: 176 LLSLALEHVAVNIA-GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEY 234
L S A VA+ A +SP + + E+ A G G+ G+ +D+AS G ++ ++LE
Sbjct: 117 LQSQAF--VALTDADALSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLET 174
Query: 235 IHVHKTAKLLEAAVVCGAVIGGG-NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELG 293
+H KT LL AAV GA+ G +A + + YA +GL FQVVDDILDVT S LG
Sbjct: 175 MHRMKTGALLRAAVRMGALAGETPSADAMAALDVYAGAVGLAFQVVDDILDVTTDSATLG 234
Query: 294 KTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
KTAGKD A+ K TY ++G++ ++ A +L +A + L F A +A L LA+ + +R
Sbjct: 235 KTAGKDAANDKPTYVSILGLDASRELAAQLRAEAHDALKPFGA-RAQRLAELADLVVNR 292
>gi|398925619|ref|ZP_10661993.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM48]
gi|398171980|gb|EJM59868.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM48]
Length = 295
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/285 (44%), Positives = 179/285 (62%), Gaps = 5/285 (1%)
Query: 74 QVNKALDEAVVLQPP--VKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACA 131
+VN AL+ P ++++AMRYS++ GGKRVRPLL A+CE +GG A AACA
Sbjct: 12 RVNAALETLFTAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGKPEQANGAACA 71
Query: 132 LEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGV 191
+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA +
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAFSALLDPRLST 131
Query: 192 SPDRV-VRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVC 250
S + ++ ++ + A G G+V G+ +D+ S G + K LEY+H HKT L+E +V
Sbjct: 132 SEAEIRLQMVSALALAAGPAGMVGGQAIDLGSVGLKLDQKALEYMHRHKTGALIEVSVKL 191
Query: 251 GAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPK 309
GA+ G E++ ++ YA+ IGL FQV DDILDV +E LGK G D+A K TYP
Sbjct: 192 GALASGRAEKDELKSLQTYAQAIGLAFQVQDDILDVESDTETLGKRQGADIARDKPTYPA 251
Query: 310 LMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L+G++ AK++A EL QA+ L F+A+ A PL LA YI R++
Sbjct: 252 LLGLDAAKAYALELRDQALHALRPFDAA-AEPLRDLARYIVDRRS 295
>gi|221310351|ref|ZP_03592198.1| hypothetical protein Bsubs1_13321 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221314675|ref|ZP_03596480.1| hypothetical protein BsubsN3_13242 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221319598|ref|ZP_03600892.1| hypothetical protein BsubsJ_13163 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221323874|ref|ZP_03605168.1| hypothetical protein BsubsS_13292 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|255767538|ref|NP_390308.2| geranyltranstransferase [Bacillus subtilis subsp. subtilis str.
168]
gi|321311912|ref|YP_004204199.1| geranyltranstransferase [Bacillus subtilis BSn5]
gi|402776690|ref|YP_006630634.1| geranyltranstransferase [Bacillus subtilis QB928]
gi|418032399|ref|ZP_12670882.1| hypothetical protein BSSC8_18260 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|428279913|ref|YP_005561648.1| hypothetical protein BSNT_03621 [Bacillus subtilis subsp. natto
BEST195]
gi|430759106|ref|YP_007209030.1| geranyltranstransferase [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|452915229|ref|ZP_21963855.1| farnesyl diphosphate synthase [Bacillus subtilis MB73/2]
gi|251757288|sp|P54383.2|ISPA_BACSU RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
AltName: Full=Geranyltranstransferase
gi|225185166|emb|CAB14359.2| geranyltranstransferase [Bacillus subtilis subsp. subtilis str.
168]
gi|291484870|dbj|BAI85945.1| hypothetical protein BSNT_03621 [Bacillus subtilis subsp. natto
BEST195]
gi|320018186|gb|ADV93172.1| geranyltranstransferase [Bacillus subtilis BSn5]
gi|351471262|gb|EHA31383.1| hypothetical protein BSSC8_18260 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|402481870|gb|AFQ58379.1| Geranyltranstransferase [Bacillus subtilis QB928]
gi|407959673|dbj|BAM52913.1| geranyltranstransferase [Bacillus subtilis BEST7613]
gi|407965248|dbj|BAM58487.1| geranyltranstransferase [Bacillus subtilis BEST7003]
gi|430023626|gb|AGA24232.1| Geranyltranstransferase [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|452115577|gb|EME05973.1| farnesyl diphosphate synthase [Bacillus subtilis MB73/2]
Length = 296
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/271 (42%), Positives = 171/271 (63%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
L P + K+M YSL AGGKR+RPL+ +A G E +P CA+EMIHT SLIHDD
Sbjct: 27 LDMPDSLKKSMLYSLQAGGKRLRPLIVLAVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAG-VSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+TA+LAGD LL+ + + + +++ VS ++ +R + E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITSHVSDEVSAEKRLRLVNEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
SA G EG+V G+ D+ +E + V+L+ELE IH KTAKLL V+ GA++ ++E
Sbjct: 147 ISAAGTEGMVGGQVADMEAENRQVTLEELESIHERKTAKLLGFCVIAGAILADAPEEDIE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
+R ++ IG+ FQ+ DDILD+ S E++GK G D + K+TYP L+ +E AK
Sbjct: 207 TLRTFSSHIGIGFQIRDDILDLEGSEEKIGKRVGSDTTNDKSTYPSLLSLEGAKHKLDVH 266
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A + K LY L + IA+R +
Sbjct: 267 IKEAKRLIGGLSLQKDL-LYELCDLIAARDH 296
>gi|261365698|ref|ZP_05978581.1| geranyltranstransferase [Neisseria mucosa ATCC 25996]
gi|288565797|gb|EFC87357.1| geranyltranstransferase [Neisseria mucosa ATCC 25996]
Length = 298
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 111/270 (41%), Positives = 165/270 (61%), Gaps = 3/270 (1%)
Query: 86 QPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDL 145
Q P +H+AMRY L GGKR+RPLL +A+ EL D++ A A+EM+H SL+HDD+
Sbjct: 31 QVPHTLHEAMRYVTLGGGKRLRPLLVLAASELGDADQNAVEQAMAAIEMVHVYSLVHDDM 90
Query: 146 PFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCS 205
P +DND RR KP H + E+TA+L GDAL + A + V G+ + + ++ +
Sbjct: 91 PAMDNDSLRRGKPTCHVKYDEATALLVGDALQTQAFD-VLSRPTGLPAEHQIAMLSTLAK 149
Query: 206 AMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGG-NAIEVER 264
A G G+ G+ +D+A+ GK ++ +LE +H KT L+ AAVV GA+ ++ +V
Sbjct: 150 ASGSLGMAGGQAIDLANVGKAMNQAQLEQMHSLKTGALIRAAVVLGALACPDLDSDDVRT 209
Query: 265 VRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELL 324
+ +YA +GL FQV+DD+LD + LGKTAGKD + K TY KLMG++ A+++A L
Sbjct: 210 LDDYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDSDNDKPTYVKLMGLQAARAYAESLT 269
Query: 325 GQAIEELAYFEASKAAPLYFLANYIASRQN 354
+A L F A KA L LA ++ +R+N
Sbjct: 270 AEAAALLEPFGA-KALHLRLLAEFVTARKN 298
>gi|292898693|ref|YP_003538062.1| geranyltranstransferase [Erwinia amylovora ATCC 49946]
gi|428784385|ref|ZP_19001876.1| geranyltranstransferase [Erwinia amylovora ACW56400]
gi|291198541|emb|CBJ45649.1| geranyltranstransferase [Erwinia amylovora ATCC 49946]
gi|312171554|emb|CBX79812.1| geranyltranstransferase [Erwinia amylovora ATCC BAA-2158]
gi|426275947|gb|EKV53674.1| geranyltranstransferase [Erwinia amylovora ACW56400]
Length = 299
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 124/297 (41%), Positives = 175/297 (58%), Gaps = 10/297 (3%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVK---IHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
F +I ++VN AL + + Q P + + AM Y L GGKR+RP L A+ +++
Sbjct: 3 FNLLLISHYQRVNAAL-QGFISQLPFQSSPLVNAMEYGALLGGKRLRPFLVYATGDMLRA 61
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
D++ A A+E IH SLIHDDLP +DND RR +P H FGE +AILAGDAL +LA
Sbjct: 62 DDAALDAPAAAIECIHAYSLIHDDLPAMDNDSLRRGQPTCHIKFGEESAILAGDALQTLA 121
Query: 181 LEHVA-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
+A + GV + + ++E+ A GV G+ G+ +D+A+EGK V+L ELE IH HK
Sbjct: 122 FSILADAPMPGVMAESRIAMLSELAQASGVAGMCGGQALDLAAEGKKVTLNELEQIHRHK 181
Query: 240 TAKLLEAAVVCGAVIGG--GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
T L+ +AV GA+ G G A + + +A IGL FQV DDILDVT +E LGK G
Sbjct: 182 TGALIRSAVRLGALTAGESGRA-ALPALDRFANAIGLAFQVQDDILDVTGDTEVLGKQQG 240
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEAS--KAAPLYFLANYIASR 352
D GK+TYP LMG++NA+ A +L ++++ L A L LA+++ R
Sbjct: 241 ADQQLGKSTYPALMGLDNARIKAWDLCQESLDALDTLAAQSYNTTALRALASFVIER 297
>gi|170719766|ref|YP_001747454.1| polyprenyl synthetase [Pseudomonas putida W619]
gi|169757769|gb|ACA71085.1| Polyprenyl synthetase [Pseudomonas putida W619]
Length = 295
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 119/267 (44%), Positives = 168/267 (62%), Gaps = 3/267 (1%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLD 149
+++ AMRYS++ GGKRVRPLL A+C+ +G A AACA+E+IH SL+HDDLP +D
Sbjct: 30 RLYAAMRYSVMNGGKRVRPLLAYAACQALGAPAEQANGAACAVELIHAYSLVHDDLPAMD 89
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAE-MCSAMG 208
+D+ RR +P +H+ F E+ AILAGD L SLA + PD + A+ + + A G
Sbjct: 90 DDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLDPRLSPQPDAIRLAMVQALAKAAG 149
Query: 209 VEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGG-GNAIEVERVRN 267
G+VAG+ +D+ S G + + LE++H HKT L+EA+V GA+ G +++ ++
Sbjct: 150 PAGMVAGQAIDLGSVGVKLDQQALEFMHRHKTGALIEASVRLGALASGRAEQAQLDALQT 209
Query: 268 YARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQA 327
YA+ IGL FQV DDILDV + LGK G D+A K TYP L+G+E AK++A EL QA
Sbjct: 210 YAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLEAAKAYAIELRDQA 269
Query: 328 IEELAYFEASKAAPLYFLANYIASRQN 354
+ L F A PL LA YI R++
Sbjct: 270 LVALEGF-GEDAEPLRALARYIVERRH 295
>gi|194366666|ref|YP_002029276.1| polyprenyl synthetase [Stenotrophomonas maltophilia R551-3]
gi|194349470|gb|ACF52593.1| Polyprenyl synthetase [Stenotrophomonas maltophilia R551-3]
Length = 292
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 119/291 (40%), Positives = 169/291 (58%), Gaps = 5/291 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
F + R Q++ AL + P ++H+AMRYS+L GGKR+RPLL AS +L G
Sbjct: 7 FARWRDRIESQLDAALPSPA--EAPQRLHQAMRYSVLGGGKRMRPLLVYASGQLFGAQPE 64
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
AA A+E+IH SL+HDDLP +D+D RR KP +H F E+TAILAGDAL + A
Sbjct: 65 SLDAAAMAVELIHAYSLVHDDLPAMDDDALRRGKPTTHIAFDEATAILAGDALQTRAFGL 124
Query: 184 VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
+A A + V + + A G G+ G+ +DI + G+ +L L +H KT L
Sbjct: 125 LA--DAPLPATLRVACLQTLAHASGASGMCGGQALDIDATGQQQTLAALTRMHALKTGAL 182
Query: 244 LEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASG 303
+ AAV GA+ G + ++ ++ ++A +GL FQV DDILDV SSE+LGKTAGKD A
Sbjct: 183 IRAAVRMGALCGQAHEPQLAQLDSFADALGLAFQVRDDILDVEASSEQLGKTAGKDQAQD 242
Query: 304 KATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K+T+P L+G++ AK+ EL + LA + +A L LA R +
Sbjct: 243 KSTFPALLGMDGAKAQLRELAARMQSTLAGY-GDEADALRALATLAVERDH 292
>gi|409397083|ref|ZP_11248026.1| geranyltranstransferase [Pseudomonas sp. Chol1]
gi|409118585|gb|EKM94984.1| geranyltranstransferase [Pseudomonas sp. Chol1]
Length = 296
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 123/268 (45%), Positives = 172/268 (64%), Gaps = 5/268 (1%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLD 149
++++AMRYS++ GGKRVRPLL A+CE + GD + A AACA+E+IH SL+HDDLP +D
Sbjct: 31 RLYQAMRYSVMNGGKRVRPLLVYAACEALRGDRATADGAACAVELIHAYSLVHDDLPAMD 90
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRV--VRAIAEMCSAM 207
+D+ RR +P +H+ F E+ AILAGD L SLA E +A PD +R A + A
Sbjct: 91 DDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEAMA-EARHNPPDAALRLRMFAVLARAA 149
Query: 208 GVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGG-GNAIEVERVR 266
G G+V G+ +D+ S G + + LE +H HKT L+EA+V GA+ G +A + +
Sbjct: 150 GPAGMVGGQAIDLGSVGLKLDREALELMHRHKTGALIEASVQLGALASGHADADSLGALS 209
Query: 267 NYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQ 326
+YAR IGL FQV DDILDV + LGK G D+A K TYP L+G++ AK++A EL Q
Sbjct: 210 HYARAIGLAFQVQDDILDVESDTATLGKHQGADIARDKPTYPALLGLDAAKAYAIELRDQ 269
Query: 327 AIEELAYFEASKAAPLYFLANYIASRQN 354
A+ L F+ + A PL LA +I R++
Sbjct: 270 ALHALRPFDIA-AEPLRDLARFIVERRS 296
>gi|325569748|ref|ZP_08145772.1| geranyltranstransferase [Enterococcus casseliflavus ATCC 12755]
gi|420262480|ref|ZP_14765121.1| geranyltranstransferase [Enterococcus sp. C1]
gi|325157053|gb|EGC69219.1| geranyltranstransferase [Enterococcus casseliflavus ATCC 12755]
gi|394770237|gb|EJF50041.1| geranyltranstransferase [Enterococcus sp. C1]
Length = 298
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 108/244 (44%), Positives = 156/244 (63%), Gaps = 3/244 (1%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAM-PAACALEMIHTMSLIHDDLPFL 148
++ K+M+YS+ AGGKR+RPLL A+ + A+ A ALEM+HT SLIHDDLP +
Sbjct: 31 RLFKSMQYSIQAGGKRIRPLLLAATVAAFHKPVNTAVYQCAAALEMVHTYSLIHDDLPAM 90
Query: 149 DNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMG 208
DND+ RR KP +H+VFGE+ AILAGD LL+ A + VA +A + ++ V + ++ A G
Sbjct: 91 DNDDLRRGKPTNHKVFGEALAILAGDGLLTAAFQLVA--MAEIEANQKVLLLQQLSKAAG 148
Query: 209 VEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNY 268
+G+VAG+ DI E + +SL+EL IH KT +L+ AV+ G V+ + + +
Sbjct: 149 TQGMVAGQAADIQGENQALSLEELMSIHERKTGELIRFAVIAGGVLADQTEEVLHELDRF 208
Query: 269 ARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAI 328
A+ IGL FQ+ DD+LD T ++EELGK +D K+TYP L+G+ A+ E LG+A
Sbjct: 209 AQHIGLAFQIRDDLLDATSTTEELGKVVRRDDELAKSTYPALLGLAGAQQALTEELGKAK 268
Query: 329 EELA 332
E LA
Sbjct: 269 EILA 272
>gi|317059120|ref|ZP_07923605.1| dimethylallyltransferase [Fusobacterium sp. 3_1_5R]
gi|313684796|gb|EFS21631.1| dimethylallyltransferase [Fusobacterium sp. 3_1_5R]
Length = 290
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 102/257 (39%), Positives = 151/257 (58%), Gaps = 2/257 (0%)
Query: 73 EQVNKALDEAVV-LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACA 131
E NK E + PV + + M+Y+ L GGKR+RP L + L+G + P A A
Sbjct: 6 EYFNKRFGEVLTQYNTPVWMAEGMQYACLQGGKRIRPQLLFMTLSLLGKERDLGFPFAAA 65
Query: 132 LEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE-HVAVNIAG 190
LEMIH+ SL+HDDLP +DND+ RR + +H+ FGE+ IL GDALL+ A V +I
Sbjct: 66 LEMIHSYSLVHDDLPAMDNDDYRRGQLTTHKKFGEANGILIGDALLTNAFSVMVRGSIGK 125
Query: 191 VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVC 250
V ++++ +A G++G++ G+ +D+A GK +S K L +IH HKT +LL ++
Sbjct: 126 VPSEKILEIVALFSEYAGIDGMIGGQAMDVAYAGKQISYKTLTFIHEHKTGRLLLLPILV 185
Query: 251 GAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKL 310
++G + + E + +Y + IGL FQ+ DDILDV S EELGK D K+TYP +
Sbjct: 186 ACILGDASLEQREALESYGKKIGLAFQIKDDILDVEGSFEELGKAVKSDEKLNKSTYPSI 245
Query: 311 MGIENAKSFAGELLGQA 327
G+E +K E L +A
Sbjct: 246 FGLEKSKELLAETLQEA 262
>gi|262281218|ref|ZP_06059000.1| geranyltranstransferase [Acinetobacter calcoaceticus RUH2202]
gi|262257449|gb|EEY76185.1| geranyltranstransferase [Acinetobacter calcoaceticus RUH2202]
Length = 303
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 116/272 (42%), Positives = 164/272 (60%), Gaps = 6/272 (2%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG-DESWAMPAACALEMIHTMSLIHDDLP 146
P + A+ ++++ GGKRVRP LC A+ L + + A AA A+E+IH SL HDDLP
Sbjct: 33 PEPLKSAVHHAVMLGGKRVRPALCYATASLQSNPNFAAARRAAVAVELIHCYSLAHDDLP 92
Query: 147 FLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNI---AGVSPDRVVRAIAEM 203
+DND RR +P H FGE TA+LAGD L S+A E + + G D +
Sbjct: 93 CMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQMQ 152
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAV-IGGGNAIEV 262
A +V+G+ +D+ +EGK ++ ELE IH +KT L++AA++ GAV I G +
Sbjct: 153 ILATASSKMVSGQVLDLQAEGKQITQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQAI 212
Query: 263 ERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGE 322
++R Y + IGL FQV+DDILD+ S+E LGKTAGKD K+TYP LMG+E A+ +A E
Sbjct: 213 PKLRQYGQTIGLAFQVLDDILDIISSTEALGKTAGKDEQVQKSTYPALMGLEQAQIYAKE 272
Query: 323 LLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L QA E LA+F A L ++ ++ +R N
Sbjct: 273 LHDQAFEALAHF-GDNAKELVDISQFLLARTN 303
>gi|347540554|ref|YP_004847979.1| polyprenyl synthetase [Pseudogulbenkiania sp. NH8B]
gi|345643732|dbj|BAK77565.1| polyprenyl synthetase [Pseudogulbenkiania sp. NH8B]
Length = 298
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 122/266 (45%), Positives = 168/266 (63%), Gaps = 2/266 (0%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPF 147
P ++H+AMRYS L GGKRVRPLL A+ ELV + A+EMIH SL+HDD+P
Sbjct: 32 PQRLHEAMRYSTLDGGKRVRPLLVHAAGELVSANPEHLARIGAAVEMIHAYSLVHDDMPC 91
Query: 148 LDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAM 207
+D+D RR KP H F ++TA+L GDAL +LA + +A + GV+ + + + A
Sbjct: 92 MDDDVLRRGKPTCHVAFDDATALLVGDALQTLAFDVLATPLDGVAAAAQLEMVRTLARAS 151
Query: 208 GVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGG-NAIEVERVR 266
G G+ G+ +D+AS G+ +SL ELEY+H KT L+ AAV+ GA+ G +A + ER+
Sbjct: 152 GHGGMAGGQAIDLASVGQTLSLPELEYMHCLKTGALIRAAVLLGALAGTPLSAEQTERLD 211
Query: 267 NYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQ 326
++A+ IGL FQVVDD+LDV + LGKTAGKD A+ K TY LMG+ A++FA EL +
Sbjct: 212 HFAKRIGLAFQVVDDVLDVDADTATLGKTAGKDAANDKPTYVSLMGLAEARAFARELRDE 271
Query: 327 AIEELAYFEASKAAPLYFLANYIASR 352
A L F A L LA+YI +R
Sbjct: 272 AFAALDGF-GPAAQRLKDLADYIVAR 296
>gi|417092358|ref|ZP_11957092.1| geranyltranstransferase [Streptococcus suis R61]
gi|353532927|gb|EHC02596.1| geranyltranstransferase [Streptococcus suis R61]
Length = 289
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 106/244 (43%), Positives = 160/244 (65%), Gaps = 5/244 (2%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIASCELVGGD--ESWAMPAACALEMIHTMSLIHDDLPF 147
++++++ YSL AGGKR+RPLL + E G + ++ AAC +E+IHT SLIHDDLP
Sbjct: 24 RLNQSVLYSLQAGGKRIRPLLLLTILESFGMELKQAHYQVAAC-VELIHTGSLIHDDLPA 82
Query: 148 LDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAM 207
+DND+ RR + +H+V+ E+TAILAGD+L +A + + ++ + E+ A
Sbjct: 83 MDNDDYRRGRLTNHKVYDEATAILAGDSLFLDPFGFLAQ--VDLPAETILALVRELSQAS 140
Query: 208 GVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRN 267
G G+VAG+ +D+A EG++++L++L+ IH +KT KLL V +I G + + + +R
Sbjct: 141 GTFGMVAGQVLDMAGEGQNLTLEQLQAIHANKTGKLLTFPFVAAGLIAGQSDVVINHLRQ 200
Query: 268 YARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQA 327
+ IGL FQV DDILDVT + EE+GKT KD+ + K+TYP LMG+E +K F + L QA
Sbjct: 201 AGQLIGLAFQVRDDILDVTATFEEIGKTPQKDVLAEKSTYPALMGLEASKVFLEDSLNQA 260
Query: 328 IEEL 331
I EL
Sbjct: 261 INEL 264
>gi|365967757|ref|YP_004949319.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
ANH9381]
gi|416077119|ref|ZP_11585743.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC1398]
gi|444337598|ref|ZP_21151544.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC4092]
gi|444349731|ref|ZP_21157085.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
serotype b str. S23A]
gi|348004256|gb|EGY44779.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC1398]
gi|365746670|gb|AEW77575.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
ANH9381]
gi|443543980|gb|ELT54070.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
serotype b str. S23A]
gi|443546641|gb|ELT56269.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC4092]
Length = 296
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 124/297 (41%), Positives = 182/297 (61%), Gaps = 6/297 (2%)
Query: 62 FPFEEYMIRKAEQVNKALDE--AVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
+ F + + +++N+ L + A + P + +AM+Y LL GGKR+RP L A+ +++G
Sbjct: 2 YHFSQDLQHVQQRINQFLAKQFAHIDSAPAPLAEAMKYGLLLGGKRIRPFLVYATGKMLG 61
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
D + AA A+E IH SLIHDDLP +D+DE RR H F E+TAILAGDAL +L
Sbjct: 62 ADMAHLDYAAAAIEAIHAYSLIHDDLPAMDDDELRRGHQTCHIAFDEATAILAGDALQTL 121
Query: 180 ALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
A E + +I +S ++ + I + +A GV+G+ G+ +D+ SE K +SL++LE IH++K
Sbjct: 122 AFE-ILTDIPHLSAEQKLMLIKTLSAAAGVKGMCLGQSLDLISEQKIISLQKLEQIHLNK 180
Query: 240 TAKLLEAAVVCGAVIGG--GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
T LL AA+ G + +A +++ YA IGL FQV DDILD+ S LGKT G
Sbjct: 181 TGALLTAALKMGFICSPHFADAALAQQLERYATAIGLAFQVQDDILDIEGDSATLGKTTG 240
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
DL + K+TYPKL+G+E AK A EL +A+ EL + A LY LA +I R++
Sbjct: 241 SDLTADKSTYPKLLGLEGAKQKALELYERALTELKNLPFNTTA-LYALAEFIVKRKS 296
>gi|385812516|ref|YP_005848907.1| geranyltranstransferase [Lactobacillus fermentum CECT 5716]
gi|299783413|gb|ADJ41411.1| Geranyltranstransferase [Lactobacillus fermentum CECT 5716]
Length = 311
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 110/234 (47%), Positives = 150/234 (64%), Gaps = 6/234 (2%)
Query: 91 IHKAMRYSLLAGGKRVRPLLCIASCELVGGD-ESWAMPAACALEMIHTMSLIHDDLPFLD 149
+ K+M YSLLAGGKR+RP L IA EL+G + + AACALE+IHT SLIHDDLP +D
Sbjct: 29 LEKSMAYSLLAGGKRLRPTLTIAVAELLGKTIDDDLVRAACALELIHTYSLIHDDLPAMD 88
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGV 209
ND+ RR KP +H V+G A LAGD LL+LA E V+ N +P R+ R + E+ A G
Sbjct: 89 NDDLRRGKPTNHRVYGPGVATLAGDGLLTLAFEWVSDNQL-KAPVRL-RLVQELAKAAGP 146
Query: 210 EGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYA 269
G+VAG+ D+++ G+++SL +L+ +H KT LL AV+ G +I ++ + +
Sbjct: 147 AGMVAGQATDVSATGQELSLAQLKKLHRQKTGALLRYAVLAGGLIAEQETAVLDCLTTFG 206
Query: 270 RCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
GL FQ+ DDILDVT ++ E+GK KD A K TYP L+G+ AK GEL
Sbjct: 207 EAYGLAFQIYDDILDVTATTAEMGKATHKDQAEQKNTYPGLLGLAGAK---GEL 257
>gi|419840652|ref|ZP_14364040.1| polyprenyl synthetase [Fusobacterium necrophorum subsp.
funduliforme ATCC 51357]
gi|386907595|gb|EIJ72302.1| polyprenyl synthetase [Fusobacterium necrophorum subsp.
funduliforme ATCC 51357]
Length = 290
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 104/257 (40%), Positives = 155/257 (60%), Gaps = 2/257 (0%)
Query: 73 EQVNKALDEAVV-LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACA 131
E N+ L+E + PV I + M+Y+ L GGKR+RP L S L+G + + +P A A
Sbjct: 6 EYFNEKLEETLAQYNTPVWIAEGMQYACLQGGKRIRPQLLFMSLALLGKEIALGLPFALA 65
Query: 132 LEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE-HVAVNIAG 190
LEMIH+ SL+HDDLP +DNDE RR + +H+ FGE+ AIL GDALL+ A V ++
Sbjct: 66 LEMIHSYSLVHDDLPAMDNDEYRRGQLTTHKKFGEANAILIGDALLTNAFSVMVRGSMGK 125
Query: 191 VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVC 250
VS ++++ +A GV+G++ G+ +D+A EGK +S K L +IH HKT +LL ++
Sbjct: 126 VSSEKILEIVALFSEYAGVDGMIGGQAMDVAYEGKQISYKTLSFIHEHKTGRLLLLPILV 185
Query: 251 GAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKL 310
++G + + + + Y R IGL FQ+ DDILDV ++GK D K+TYP +
Sbjct: 186 ACILGDASLEQRKALEIYGRNIGLAFQIKDDILDVEGDFAQMGKAVKSDEKLQKSTYPSI 245
Query: 311 MGIENAKSFAGELLGQA 327
G+E +K E L +A
Sbjct: 246 FGLEKSKEMLAESLREA 262
>gi|350266625|ref|YP_004877932.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349599512|gb|AEP87300.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii
TU-B-10]
Length = 296
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 114/271 (42%), Positives = 172/271 (63%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
L P + ++M YSL GGKR+RPL+ +A G E +P CA+EMIHT SLIHDD
Sbjct: 27 LDMPDSLKESMLYSLETGGKRLRPLIVLAVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAG-VSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+TA+LAGD LL+ + + + +++ VS ++ +R + E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITSHLSDEVSAEKRLRLVNEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
SA G EG+V G+ D+ +E + V+L+ELE IH KTAKLL +V+ GA++ ++E
Sbjct: 147 ISAAGTEGMVGGQVADMEAENRQVTLEELESIHERKTAKLLGFSVIAGAILADAPEEDIE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
+R ++R IG+ FQ+ DDILD+ S E++GK G D + K+TYP L+ +E AK
Sbjct: 207 TLRTFSRHIGIGFQIRDDILDLEGSEEKIGKRVGSDTTNEKSTYPSLLSLEGAKHKLDVH 266
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A + K LY L + IA+R +
Sbjct: 267 IKEAKRLIGGLSLQKDL-LYELCDLIAARDH 296
>gi|315282228|ref|ZP_07870682.1| geranyltranstransferase [Listeria marthii FSL S4-120]
gi|313614130|gb|EFR87820.1| geranyltranstransferase [Listeria marthii FSL S4-120]
Length = 293
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 116/287 (40%), Positives = 171/287 (59%), Gaps = 7/287 (2%)
Query: 73 EQVNKALDEAVVLQPPV-----KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMP 127
E K +DE++ + V K+ ++M YS+ AGGKR+RP+L A+ + + D +
Sbjct: 9 EHYKKVIDESLFKEISVRNIEPKLKESMLYSVQAGGKRIRPMLVFATLQALNADPLLGVR 68
Query: 128 AACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVN 187
A ALEMIHT SLIHDDLP +DND+ RR K +H++FG++TAILAGDALL+LA +A +
Sbjct: 69 TATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKIFGDATAILAGDALLTLAFSILAED 128
Query: 188 IAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAA 247
+S + + I E+ + G EG+V G+ D+ +E K V+L+EL IH KT +LL A
Sbjct: 129 -ENLSFETRLALIKEISFSSGAEGMVGGQQADMEAENKQVTLEELSSIHARKTGELLIFA 187
Query: 248 VVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATY 307
V A I ++ + +R+R +A IG+ FQ+ DDILDV ++GK G D K+TY
Sbjct: 188 VTSAAKIAEADSEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKKTGVDAFLNKSTY 247
Query: 308 PKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
P L+ ++ AK E + A L+ + L LA+ IA R+N
Sbjct: 248 PGLLTLDGAKRALNEHMSIAKSALSGHDFDDEILLQ-LADLIALREN 293
>gi|296333415|ref|ZP_06875868.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305675079|ref|YP_003866751.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296149613|gb|EFG90509.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305413323|gb|ADM38442.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 296
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 115/271 (42%), Positives = 171/271 (63%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
L P + K+M YSL AGGKR+RPL+ +A G E +P CA+EMIHT SLIHDD
Sbjct: 27 LDMPDSLKKSMLYSLEAGGKRLRPLIVLAVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAG-VSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+TA+LAGD LL+ + + + +++ VS ++ +R + E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITSHVSDEVSAEKRLRLVNEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
SA G EG+V G+ D+ +E + V+L+ELE IH KTAKLL V+ GA++ ++E
Sbjct: 147 ISAAGTEGMVGGQVADMEAENRQVTLEELESIHERKTAKLLSFCVIAGAILADAPEEDIE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
+R ++ IG+ FQ+ DDILD+ S E++GK G D + K+TYP L+ +E AK
Sbjct: 207 TLRTFSSHIGIGFQIRDDILDLEGSEEKIGKRVGSDTTNEKSTYPSLLSLEGAKHKLDVH 266
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A + K LY L + IA+R +
Sbjct: 267 IKEAKRLIGGLSLQKDL-LYELCDLIAARDH 296
>gi|33600896|ref|NP_888456.1| geranyltranstransferase [Bordetella bronchiseptica RB50]
gi|33568496|emb|CAE32408.1| probable geranyltranstransferase [Bordetella bronchiseptica RB50]
Length = 303
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 177/300 (59%), Gaps = 21/300 (7%)
Query: 66 EYMIRKAEQVNKALDEAVVLQP-----PVKIHKAMRYSLLAGGKRVRPLLCIAS---CEL 117
+++ +A+ V LDE L P P ++H+AMRY++L GGKRVR L A+ C +
Sbjct: 10 DWLRERAQHVEHVLDE---LLPGADIAPSRLHEAMRYAVLGGGKRVRAALVYAAGQACPV 66
Query: 118 VGGDESWAMP---AACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGD 174
G + AA A+E+IH SL+HDDLP +D+D RR +P H F E+TA+LAGD
Sbjct: 67 NGSTLAVGASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAGD 126
Query: 175 ALLSLALEHVAVNIAG--VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKEL 232
AL LA E +AG ++P VV+A + A G +G+ G+ +D+ S G+ ++ EL
Sbjct: 127 ALQPLAFE----LLAGMPIAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDEL 182
Query: 233 EYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEEL 292
+ +H KT +L +V G ++ G ++ + + +YA+ IGL FQVVDDILDVT + L
Sbjct: 183 QTMHSMKTGAMLACSVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTASL 242
Query: 293 GKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
GKTAGKD A K TY L+G++ A++ A EL A + LA S A L LA++I R
Sbjct: 243 GKTAGKDAADNKPTYVSLLGLDQARALAQELRQAAHQALAPLGES-GARLGQLADFIVLR 301
>gi|419955642|ref|ZP_14471767.1| geranyltranstransferase [Pseudomonas stutzeri TS44]
gi|387967555|gb|EIK51855.1| geranyltranstransferase [Pseudomonas stutzeri TS44]
Length = 296
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 123/268 (45%), Positives = 172/268 (64%), Gaps = 5/268 (1%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLD 149
++++AMRYS++ GGKRVRPLL A+CE + GD + A AACA+E+IH SL+HDDLP +D
Sbjct: 31 RLYQAMRYSVMNGGKRVRPLLVYAACEALRGDRATADGAACAVELIHAYSLVHDDLPAMD 90
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRV--VRAIAEMCSAM 207
+D+ RR +P +H+ F E+ AILAGD L SLA E +A PD +R A + A
Sbjct: 91 DDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEAMA-EARHNPPDAALRLRMFAVLARAA 149
Query: 208 GVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGG-GNAIEVERVR 266
G G+V G+ +D+ S G + + LE +H HKT L+EA+V GA+ G +A + +
Sbjct: 150 GPAGMVGGQAIDLGSVGLKLDREALELMHRHKTGALIEASVQLGALASGHADADSLGALS 209
Query: 267 NYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQ 326
+YAR IGL FQV DDILDV + LGK G D+A K TYP L+G++ AK++A EL Q
Sbjct: 210 HYARGIGLAFQVQDDILDVESDTATLGKHQGADIARDKPTYPALLGLDEAKAYAIELRDQ 269
Query: 327 AIEELAYFEASKAAPLYFLANYIASRQN 354
A+ L F+ + A PL LA +I R++
Sbjct: 270 ALHALRPFDIA-AEPLRELARFIVGRRS 296
>gi|120602763|ref|YP_967163.1| polyprenyl synthetase [Desulfovibrio vulgaris DP4]
gi|387153107|ref|YP_005702043.1| farnesyltranstransferase [Desulfovibrio vulgaris RCH1]
gi|120562992|gb|ABM28736.1| farnesyl-diphosphate synthase [Desulfovibrio vulgaris DP4]
gi|311233551|gb|ADP86405.1| Farnesyltranstransferase [Desulfovibrio vulgaris RCH1]
Length = 299
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 121/266 (45%), Positives = 165/266 (62%), Gaps = 1/266 (0%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPF 147
P ++ AM YSLLAGGKR+RP+LC+++ + G D MP A A+E+IHT SLIHDDLP
Sbjct: 32 PPRLQSAMEYSLLAGGKRLRPVLCLSTAGMTGLDPMSVMPFAAAIELIHTYSLIHDDLPA 91
Query: 148 LDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAM 207
+D+D+ RR +P++H F E+TAILAGD LL+ A + +A G+ V+ A+ E+ SA
Sbjct: 92 MDDDDLRRGRPSNHRQFDEATAILAGDGLLTDAFDLMASVGGGIPAGHVLAALREVSSAA 151
Query: 208 GVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVR 266
G G+V G+ +D+ G+ D+ L L +H KT L+ + V GA++GG A VE+V
Sbjct: 152 GSSGMVGGQALDMDYTGRDDIDLAALRTMHAMKTGALIRCSCVAGALLGGAPASAVEQVA 211
Query: 267 NYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQ 326
Y IG FQ+VDDILD T +LGK G D+ GK TYP L+GIE +++ A E
Sbjct: 212 GYGAAIGAAFQIVDDILDETGDEAQLGKPVGSDVEQGKVTYPSLLGIERSRALAQEQADI 271
Query: 327 AIEELAYFEASKAAPLYFLANYIASR 352
A+ LA FE A L LA YI R
Sbjct: 272 AVTCLADFEGEDADFLRALAQYIVDR 297
>gi|33152401|ref|NP_873754.1| farnesyl-diphosphate synthase [Haemophilus ducreyi 35000HP]
gi|33148624|gb|AAP96143.1| geranyltranstransferase [Haemophilus ducreyi 35000HP]
Length = 308
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 114/272 (41%), Positives = 169/272 (62%), Gaps = 8/272 (2%)
Query: 86 QPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDL 145
QPP +++AM Y++L GGKR+RP L + +++G + +A A+E IH SL+HDDL
Sbjct: 42 QPP--LNQAMAYAVLLGGKRIRPFLMYTTGKMLGVPLTTLDHSAAAIEAIHAYSLVHDDL 99
Query: 146 PFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCS 205
P +DND+ RR KP H F E+TAILAG+AL +LA E +A N ++ + V+ I + +
Sbjct: 100 PAMDNDQLRRGKPTCHIAFDEATAILAGNALQALAFELIA-NAPHLTDWQKVQQIRTLST 158
Query: 206 AMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGG---GNAIEV 262
A G +G+ G+ +D+ +E K ++L ELE IH HKT L+ A+V+ + NAI+
Sbjct: 159 AAGAKGMCLGQNLDLLAENKSLNLTELEQIHRHKTGALIVASVLMAVNLSDHAQNNAIK- 217
Query: 263 ERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGE 322
+ + YA+ IGL FQV DDILDV ++++GKT G D K+TYPKL+G+ AK A +
Sbjct: 218 QPLERYAQAIGLAFQVQDDILDVIGQTDKIGKTVGADQQLHKSTYPKLLGLTQAKQKAQD 277
Query: 323 LLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L A+ LA K+ L LA++I R+N
Sbjct: 278 LHQTALNALAEL-PFKSTALKELADFIIHREN 308
>gi|422619559|ref|ZP_16688248.1| polyprenyl synthetase, partial [Pseudomonas syringae pv. japonica
str. M301072]
gi|330899928|gb|EGH31347.1| polyprenyl synthetase, partial [Pseudomonas syringae pv. japonica
str. M301072]
Length = 281
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 120/275 (43%), Positives = 173/275 (62%), Gaps = 4/275 (1%)
Query: 67 YMIRKAEQVNKALDEAVVLQPPV--KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW 124
Y + +VN ALD P ++++AMRYS++ GGKRVRPLL A+CE +GG
Sbjct: 5 YQAQSQTRVNAALDGLFKAPGPELERLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAED 64
Query: 125 AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH- 183
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 65 ANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTAL 124
Query: 184 VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
+A ++ + ++ + + +A G G+V G+ +D+ S G + LEY+H HKT L
Sbjct: 125 LAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGAL 184
Query: 244 LEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
+EA+V GA+ G + ++ ++ YAR IGL FQV DDILDV + LGK G D+A
Sbjct: 185 IEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADIAR 244
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEAS 337
K TYP L+G+E AK +A EL QA++ L+ F+A+
Sbjct: 245 DKPTYPALLGLEAAKHYALELRDQALQALSPFDAA 279
>gi|421139007|ref|ZP_15599053.1| geranyltranstransferase [Pseudomonas fluorescens BBc6R8]
gi|404509730|gb|EKA23654.1| geranyltranstransferase [Pseudomonas fluorescens BBc6R8]
Length = 295
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 130/295 (44%), Positives = 184/295 (62%), Gaps = 5/295 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPV--KIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
+ Y +VN AL+ V P ++++AMRYS++ GGKRVRPLL A+CE +G
Sbjct: 2 IDAYQAGSQARVNAALEPLFVAPSPELNRLYEAMRYSVMNGGKRVRPLLAYAACEALGAQ 61
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 62 AEEANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 182 EHVA-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKT 240
+ ++ V+ + +R + + A G G+V G+ +D+ S G + + LEY+H HKT
Sbjct: 122 SALLDPRLSSVNAEIRLRMVTALALAAGPAGMVGGQAIDLGSVGLKLDQQALEYMHRHKT 181
Query: 241 AKLLEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
L+EAAV GA+ G A ++ ++ YAR IGL FQV DDILDV + LGK G D
Sbjct: 182 GALIEAAVHLGALASGRAEAAQLAALQTYARAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+A K TYP L+G+E AK++A EL QA++ L F+A+ A PL LA YI R++
Sbjct: 242 IARDKPTYPSLLGLEAAKAYALELRDQALDALRPFDAA-AEPLRDLARYIVERRH 295
>gi|218289630|ref|ZP_03493850.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius LAA1]
gi|218240280|gb|EED07463.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius LAA1]
Length = 291
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 125/296 (42%), Positives = 183/296 (61%), Gaps = 14/296 (4%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPP---VKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
+ Y+ E VN L A + +P ++ +AM YSL+A GKR+RP L IA+ E G
Sbjct: 1 MQTYLEACKEAVNALL--ARLFEPTGLHARLKEAMNYSLMADGKRLRPALVIATAETFGV 58
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
+PAA A+E+IH SLIHDDLP +D+D+ RR +P +H VFGE+ A+LAGDALL+ A
Sbjct: 59 PRDRVLPAAAAVELIHCYSLIHDDLPCMDDDDLRRGQPTNHVVFGEAMALLAGDALLTEA 118
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKT 240
+A + GV +R + I + S GV+G+V G+ VDI G +L+++++IH+HKT
Sbjct: 119 FHLLARPLEGVPAERQLAMIRTLASRAGVDGMVGGQAVDIERTGGQGTLQDVDFIHLHKT 178
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVR----NYARCIGLLFQVVDDILDVTKSSEELGKTA 296
A+L++A V IGG A ++VR Y C+GL FQ++DD+LDVT S+E+LGKTA
Sbjct: 179 ARLIQACV----EIGGYFADLDDQVRWALSCYGECLGLAFQMIDDVLDVTASTEQLGKTA 234
Query: 297 GKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
GKD GK TYP+ +G+E + A +++ + + LA ++ PL L I R
Sbjct: 235 GKDAEEGKLTYPRFVGVEKTRQMARDVIRRGEQALAEV-GVRSEPLKALQALIVER 289
>gi|154483652|ref|ZP_02026100.1| hypothetical protein EUBVEN_01356 [Eubacterium ventriosum ATCC
27560]
gi|149735562|gb|EDM51448.1| polyprenyl synthetase [Eubacterium ventriosum ATCC 27560]
Length = 296
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 102/230 (44%), Positives = 142/230 (61%), Gaps = 1/230 (0%)
Query: 91 IHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDN 150
I +AM YSL AGGKR+RP+L + + L GGDE A P A+EMIHT SL+HDDLP +DN
Sbjct: 33 IIEAMNYSLKAGGKRLRPMLVLETLRLFGGDEKEAYPFMAAMEMIHTYSLVHDDLPAMDN 92
Query: 151 DERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVS-PDRVVRAIAEMCSAMGV 209
D RR K +H V+GE ILAGD LL++A E +++ I P R A+ + G+
Sbjct: 93 DMYRRGKKTTHAVYGEDIGILAGDGLLNMAYETMSMAILKSKYPQRAALAMNILAYKAGI 152
Query: 210 EGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYA 269
G++ G+ VD+ +E K+ + + +IH KTA L+E A++ GA++ G + VE V A
Sbjct: 153 YGMIGGQTVDVINENKEKDIDTINFIHKLKTAALIEGAMMVGAILAGVDEQAVETVEEIA 212
Query: 270 RCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSF 319
+G+ FQ+ DDILDVT + EELGK D + K TY L GI+ +K
Sbjct: 213 TNVGIAFQIQDDILDVTGTLEELGKPVLSDEKNNKTTYVTLKGIDESKRL 262
>gi|282889795|ref|ZP_06298334.1| hypothetical protein pah_c004o183 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281500369|gb|EFB42649.1| hypothetical protein pah_c004o183 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 305
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 100/245 (40%), Positives = 154/245 (62%), Gaps = 1/245 (0%)
Query: 87 PPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLP 146
P + A RYSLL GGKR+RPLL +A + + G + A+ ACALE+IHT SL+HDDLP
Sbjct: 39 PYQSLFDAARYSLLGGGKRIRPLLSLAVTQALTGTFTQAIQPACALELIHTYSLVHDDLP 98
Query: 147 FLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSA 206
+DND+ RR KP+ H+VF E AIL GD LL+ A E V + G++ ++V +A + +
Sbjct: 99 SMDNDDFRRGKPSLHKVFPEGHAILTGDFLLTYAFE-VLCSSPGLTAQQIVELVALLAKS 157
Query: 207 MGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVR 266
G G++AG+ +DI++ + ++L L++IH KT L+ AV GA++ G +E ++
Sbjct: 158 AGGHGMIAGQIMDISAVNQTLTLDNLQHIHQTKTGALITCAVEFGAIVSGCAPVERALLQ 217
Query: 267 NYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQ 326
+ IGL FQ++DD+LD+T S + G + DL + K TY L+G+E A+ A + +
Sbjct: 218 QFGNEIGLAFQIIDDVLDITSSHAKHGDSVASDLKNNKTTYATLLGVEKAQLLAQKHVQT 277
Query: 327 AIEEL 331
A+ +L
Sbjct: 278 ALAKL 282
>gi|398865851|ref|ZP_10621360.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM78]
gi|398242300|gb|EJN27919.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM78]
Length = 295
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 125/285 (43%), Positives = 181/285 (63%), Gaps = 5/285 (1%)
Query: 74 QVNKALDEAVVLQPP--VKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACA 131
+VN A++ V P ++++AMRYS++ GGKRVRPLL A+CE +GG A AACA
Sbjct: 12 RVNAAMETLFVAPGPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGKAEQANGAACA 71
Query: 132 LEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVA-VNIAG 190
+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA + ++
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAFSALLDPRLSD 131
Query: 191 VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVC 250
+ ++ ++ + A G G+V G+ +D+ S G + K LEY+H HKT L+E +V
Sbjct: 132 ADAEIRLQMVSALALAAGPAGMVGGQAIDLGSVGLKLDQKALEYMHRHKTGALIEVSVKL 191
Query: 251 GAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPK 309
GA+ G E++ ++ YA+ IGL FQV DDILDV +E LGK G D+A K TYP
Sbjct: 192 GALSSGRAEKDELKSLQTYAQAIGLAFQVQDDILDVESDTETLGKRQGADIARDKPTYPA 251
Query: 310 LMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L+G++ AK++A EL QA+ L F+A+ A PL LA YI R++
Sbjct: 252 LLGLDAAKAYALELRDQALHALRPFDAA-AEPLRELARYIVERRS 295
>gi|291545449|emb|CBL18557.1| Geranylgeranyl pyrophosphate synthase [Ruminococcus sp. SR1/5]
Length = 301
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 175/294 (59%), Gaps = 6/294 (2%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPV--KIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
F+E + R+ E+ + E + + + +AM YS+ AGGKR+RP+L + EL GG
Sbjct: 9 FKEELKRRTEEAEHVIREYLPEESGFAKTMAEAMNYSMTAGGKRLRPILIRETYELFGGK 68
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
+ P A+EMIHT SLIHDDLP LDND+ RR + +H+V+GE+ +L+G ALL+ A
Sbjct: 69 DKLCEPFMAAMEMIHTHSLIHDDLPALDNDDYRRGRLTTHKVYGEAMGVLSGVALLNRAY 128
Query: 182 EHV--AVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
E + A ++ G DRV+ A+ + G+ G++ G+ VD+ ++GK + K L+YI+ +K
Sbjct: 129 EVMLSAFDLTG-DKDRVIAAMRIIADKTGINGMLGGQSVDVENDGKPLEHKMLDYIYKNK 187
Query: 240 TAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKD 299
T+ L+EA+++ GAV+ G + E++ V A IGL FQ+ DDILDVT + EELGK D
Sbjct: 188 TSALIEASMMTGAVLAGASEKELKVVEQAAENIGLAFQIQDDILDVTSTQEELGKPIHSD 247
Query: 300 LASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
+ K TY L+G A S EL A+E L + K L L + SR+
Sbjct: 248 EKNNKVTYVSLVGAPAAASRVKELSDHAVELLDDLD-RKNGFLDLLVESLVSRR 300
>gi|46579760|ref|YP_010568.1| geranylgeranyl diphosphate synthase [Desulfovibrio vulgaris str.
Hildenborough]
gi|46449175|gb|AAS95827.1| geranylgeranyl diphosphate synthase [Desulfovibrio vulgaris str.
Hildenborough]
Length = 287
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 121/266 (45%), Positives = 165/266 (62%), Gaps = 1/266 (0%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPF 147
P ++ AM YSLLAGGKR+RP+LC+++ + G D MP A A+E+IHT SLIHDDLP
Sbjct: 20 PPRLQSAMEYSLLAGGKRLRPVLCLSTAGMTGLDPMSVMPFAAAIELIHTYSLIHDDLPA 79
Query: 148 LDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAM 207
+D+D+ RR +P++H F E+TAILAGD LL+ A + +A G+ V+ A+ E+ SA
Sbjct: 80 MDDDDLRRGRPSNHRQFDEATAILAGDGLLTDAFDLMASVGGGIPAGHVLAALREVSSAA 139
Query: 208 GVEGLVAGEFVDIASEGK-DVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVR 266
G G+V G+ +D+ G+ D+ L L +H KT L+ + V GA++GG A VE+V
Sbjct: 140 GSSGMVGGQALDMDYTGRDDIDLAALRTMHAMKTGALIRCSCVAGALLGGAPASAVEQVA 199
Query: 267 NYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQ 326
Y IG FQ+VDDILD T +LGK G D+ GK TYP L+GIE +++ A E
Sbjct: 200 GYGAAIGAAFQIVDDILDETGDEAQLGKPVGSDVEQGKVTYPSLLGIERSRALAQEQADI 259
Query: 327 AIEELAYFEASKAAPLYFLANYIASR 352
A+ LA FE A L LA YI R
Sbjct: 260 AVTCLADFEGEDADFLRALAQYIVDR 285
>gi|77165502|ref|YP_344027.1| polyprenyl synthetase [Nitrosococcus oceani ATCC 19707]
gi|254434894|ref|ZP_05048402.1| polyprenyl synthetase superfamily [Nitrosococcus oceani AFC27]
gi|76883816|gb|ABA58497.1| farnesyl-diphosphate synthase [Nitrosococcus oceani ATCC 19707]
gi|207091227|gb|EDZ68498.1| polyprenyl synthetase superfamily [Nitrosococcus oceani AFC27]
Length = 296
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/269 (39%), Positives = 159/269 (59%), Gaps = 2/269 (0%)
Query: 87 PPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLP 146
PP ++H+AMRY++L GGKR+RPLL ++ +G E+ A A+E+IH SL+HDDLP
Sbjct: 29 PPKRLHEAMRYAVLGGGKRLRPLLTYSAGIALGVSEAVLDAPASAVELIHAYSLVHDDLP 88
Query: 147 FLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSA 206
+DND RR P H+ FGE+TA+LAGDAL +LA +A + + + + + A
Sbjct: 89 SMDNDSLRRGHPTCHKAFGETTALLAGDALQALAFRTLAEPTSAIPAKNQINMLELLAEA 148
Query: 207 MGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGG-NAIEVERV 265
G G+ G+ +D+ S G ++L E+E +H KT L+ A+V+ GA +E +
Sbjct: 149 AGSRGMAGGQAIDLDSVGVQLTLSEMETMHRLKTGALIRASVLLGAWCHPEITQDTLENL 208
Query: 266 RNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLG 325
+A+CIGL FQ+ DD+LDV + LGK G D A K TYP L+G+ AK+ A LL
Sbjct: 209 DRFAQCIGLAFQIQDDVLDVESDTATLGKPQGSDKAQDKPTYPSLLGLTQAKARAQSLLE 268
Query: 326 QAIEELAYFEASKAAPLYFLANYIASRQN 354
A + L +A L +LA++I R++
Sbjct: 269 DARQTLRAIDAPTEH-LEWLADFIVKRRH 296
>gi|386390595|ref|ZP_10075380.1| polyprenyl synthetase [Haemophilus paraphrohaemolyticus HK411]
gi|385692812|gb|EIG23482.1| polyprenyl synthetase [Haemophilus paraphrohaemolyticus HK411]
Length = 297
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 122/297 (41%), Positives = 176/297 (59%), Gaps = 8/297 (2%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
T E R ++ L+ +Q P+ AM Y++L GGKRVRP L A+ ++G
Sbjct: 6 TTDLAEIQQRINHYLSTQLETLKTMQAPLA--DAMAYAVLLGGKRVRPFLMYATGRMLGV 63
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
+ +A A+E IH SL+HDDLP +D+D RR KP H F E+TAILAGDAL S A
Sbjct: 64 HLAKIDASAGAMESIHAYSLVHDDLPAMDDDALRRGKPTCHIAFDEATAILAGDALQSFA 123
Query: 181 LEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKT 240
E +A + ++P + +R I + A G +G+ G+ +D+ +E K VSL+ELE IH +KT
Sbjct: 124 FELIADD-ELLTPLQKIRQIQSLAKAAGAKGMCLGQNLDLLAENKAVSLEELELIHRNKT 182
Query: 241 AKLLEAAVVCGAVIGG---GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
L+EA+V+ G + IE++ ++ YA+ IGL FQV DDILDV ++++GKTAG
Sbjct: 183 GALIEASVLMGFNLSDYAEDKYIEMQ-LQRYAQAIGLAFQVQDDILDVIGETDKIGKTAG 241
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
D K+TYPKL+G+E A+ A +L AI+ L A L LA++I R+N
Sbjct: 242 ADEQHNKSTYPKLLGLEGAQQKAQKLYQVAIDALNELNFDTTA-LKELADFIIHREN 297
>gi|238795560|ref|ZP_04639075.1| Geranyltranstransferase [Yersinia mollaretii ATCC 43969]
gi|238720679|gb|EEQ12480.1| Geranyltranstransferase [Yersinia mollaretii ATCC 43969]
Length = 306
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 123/306 (40%), Positives = 172/306 (56%), Gaps = 18/306 (5%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELV 118
+ F + + ++VN+AL + + P + +AMRY + GGKR+RP L A+ ++
Sbjct: 7 SLDFSQQLTAHQQRVNQALLDFIAPLPFGDSDLVEAMRYGAVLGGKRLRPYLVYATGQMF 66
Query: 119 GGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLS 178
G A A+E IH SLIHDDLP +DND+ RR +P H FGE+ AILAGDAL +
Sbjct: 67 GLSLVNLDAPAAAIECIHAYSLIHDDLPAMDNDDLRRGQPTCHVKFGEANAILAGDALQT 126
Query: 179 LALEHVA-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHV 237
LA +A +++ V+ + +AE+ A GV G+ G+ +D+ +E + +SL +LE IH
Sbjct: 127 LAFSILAEADMSDVADKDRLAMVAELARASGVAGMCGGQALDLEAEARQISLADLEQIHR 186
Query: 238 HKTAKLLEAAVVCGAVIGGGNAIEVERVR-------NYARCIGLLFQVVDDILDVTKSSE 290
HKT L+ AAV GA+ G ER R YA IGL FQV DDILDV +
Sbjct: 187 HKTGALIRAAVRLGALAAG------ERGRAALPFLDRYAEAIGLAFQVQDDILDVIGDTA 240
Query: 291 ELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEAS--KAAPLYFLANY 348
+GK G D GK+TYP LMG++ AK+ A +L +A+ L A APL LA +
Sbjct: 241 TIGKRQGSDQQLGKSTYPALMGLDCAKAKAMDLYQEALSALNILSAQSYNIAPLQALACF 300
Query: 349 IASRQN 354
I R N
Sbjct: 301 IIERDN 306
>gi|445404323|ref|ZP_21430970.1| polyprenyl synthetase [Acinetobacter baumannii Naval-57]
gi|444782485|gb|ELX06386.1| polyprenyl synthetase [Acinetobacter baumannii Naval-57]
Length = 303
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 118/274 (43%), Positives = 166/274 (60%), Gaps = 10/274 (3%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG-DESWAMPAACALEMIHTMSLIHDDLP 146
P + A+ ++++ GGKRVRP LC A+ L + + A AA A+E+IH SL HDDLP
Sbjct: 33 PEPLKSAVHHAVMLGGKRVRPALCYATASLQNNPNFAAARRAAVAVELIHCYSLAHDDLP 92
Query: 147 FLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNI-----AGVSPDRVVRAIA 201
+DND RR +P H FGE TA+LAGD L S+A E + + G V++ I
Sbjct: 93 CMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQ 152
Query: 202 EMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAV-IGGGNAI 260
+ +A +V G+ +D+ +E K +S ELE IH +KT L++AA++ GAV I G
Sbjct: 153 ILATASS--KMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQ 210
Query: 261 EVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFA 320
+ ++R Y + IGL FQV DDILD+T S+E LGKTAGKD K+TYP LMG+E A+ +A
Sbjct: 211 AIPKLRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQIYA 270
Query: 321 GELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
EL QA E LA+F A L ++ ++ +R N
Sbjct: 271 KELHDQAFEALAHF-GENAKELVEISQFLLARTN 303
>gi|338175922|ref|YP_004652732.1| geranylgeranyl pyrophosphate synthase [Parachlamydia acanthamoebae
UV-7]
gi|336480280|emb|CCB86878.1| geranylgeranyl pyrophosphate synthase,chloroplastic [Parachlamydia
acanthamoebae UV-7]
Length = 305
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 100/245 (40%), Positives = 154/245 (62%), Gaps = 1/245 (0%)
Query: 87 PPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLP 146
P + A RYSLL GGKR+RPLL +A + + G + A+ ACALE+IHT SL+HDDLP
Sbjct: 39 PYQSLFDAARYSLLGGGKRIRPLLSLAVIQALTGTFTQAIQPACALELIHTYSLVHDDLP 98
Query: 147 FLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSA 206
+DND+ RR KP+ H+VF E AIL GD LL+ A E V + G++ ++V +A + +
Sbjct: 99 SMDNDDFRRGKPSLHKVFPEGHAILTGDFLLTYAFE-VLCSSPGLTAQQIVELVALLAKS 157
Query: 207 MGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVR 266
G G++AG+ +DI++ + ++L L++IH KT L+ AV GA++ G +E ++
Sbjct: 158 AGGHGMIAGQIMDISAVNQTLTLDNLQHIHQTKTGALITCAVEFGAIVSGCAPVERALLQ 217
Query: 267 NYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQ 326
+ IGL FQ++DD+LD+T S + G + DL + K TY L+G+E A+ A + +
Sbjct: 218 QFGNEIGLAFQIIDDVLDITSSHAKHGDSVASDLKNNKTTYATLLGVEKAQLLAQKHVQT 277
Query: 327 AIEEL 331
A+ +L
Sbjct: 278 ALAKL 282
>gi|315646331|ref|ZP_07899451.1| Polyprenyl synthetase [Paenibacillus vortex V453]
gi|315278530|gb|EFU41846.1| Polyprenyl synthetase [Paenibacillus vortex V453]
Length = 301
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 113/296 (38%), Positives = 177/296 (59%), Gaps = 4/296 (1%)
Query: 63 PFEEYMIRKAEQVNKALDEAV--VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
P +YM ++++ L + P +HK+M YSL+AGGKR+RPLL IA+CE GG
Sbjct: 6 PINQYMNEICDRLDSELTNLFPPSWKVPETLHKSMSYSLMAGGKRMRPLLVIAACEAGGG 65
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
A+P ACA+EM+HT SL+HDDLP +D+D+ RR KP +H+VFGE++AILAGDALL+ A
Sbjct: 66 SRDAAIPVACAVEMVHTYSLVHDDLPAMDDDDYRRGKPTNHKVFGEASAILAGDALLTHA 125
Query: 181 LEHV--AVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
+ A GV +RV+ + ++ G G+V G+ D+ E +L++LEYIH+H
Sbjct: 126 FYSIIQASRQFGVPAERVLSIVEDLAEYAGPRGMVGGQVADMEGEQGLTTLEQLEYIHLH 185
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT+ L+ +++ G I G ++E +R + IGL FQ+ DDILD+ +LGK
Sbjct: 186 KTSDLIMFSLMAGGHIAGCTEAQIESLRIFGHHIGLAFQIQDDILDLVGDESKLGKPVQS 245
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
D+ K TYP +G++ ++ L +A + + + L +A+++ +R +
Sbjct: 246 DVKQEKVTYPYFIGLDPSRREVERLTAEAKRVITEGNFNDPSRLLEIADFLMARDH 301
>gi|238024940|ref|YP_002909172.1| polyprenyl synthetase [Burkholderia glumae BGR1]
gi|237879605|gb|ACR31937.1| Polyprenyl synthetase [Burkholderia glumae BGR1]
Length = 294
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 123/297 (41%), Positives = 176/297 (59%), Gaps = 11/297 (3%)
Query: 62 FPFEEYMIRKAEQVNKALD-----EAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCE 116
F+++M +V AL + VV P +H+AMRY+++ GGKRVRPLLC A+ E
Sbjct: 1 MTFQQWMRAVLARVEDALGHYLPADTVV---PGTLHEAMRYAVMGGGKRVRPLLCHAAGE 57
Query: 117 LVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDAL 176
L G E+ + A+ ALEMIH SL+HDD+P +D+D RR KP H + E TA+L GDAL
Sbjct: 58 LTGASEAASNAASAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDAL 117
Query: 177 LSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIH 236
S A + + A +SP + + E+ A G G+ G+ +D+AS G+ ++ ++LE +H
Sbjct: 118 QSQAFVAL-TDAAALSPQQQAALVRELALASGSIGMAGGQAIDLASVGQMLTREQLETMH 176
Query: 237 VHKTAKLLEAAVVCGAVIGGGNAIEVERVRN-YARCIGLLFQVVDDILDVTKSSEELGKT 295
KT LL A+V GA+ G + R + YA +GL FQVVDDILDVT S LGKT
Sbjct: 177 RMKTGALLRASVRMGALAGETPTADTMRALDAYAAAVGLAFQVVDDILDVTTDSATLGKT 236
Query: 296 AGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
AGKD A+ K TY ++G++ ++ A +L A L F A +A L LA+ + +R
Sbjct: 237 AGKDAAANKPTYVSIIGLDASRELAAQLRADAHAALQPFGA-RAQRLAELADLVVNR 292
>gi|735880|gb|AAA81879.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
thaliana]
Length = 326
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 103/243 (42%), Positives = 146/243 (60%), Gaps = 14/243 (5%)
Query: 61 TFPFEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGG-KRVRPLLCIASCELVG 119
F Y ++N+ LDEA+ ++ P I++AMRYS+L G KR P++C+A+CEL G
Sbjct: 44 NFDLRTYWTTLITEINQKLDEAIPVKHPAGIYEAMRYSVLPQGPKRAPPVMCVAACELFG 103
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
GD A P ACALEM+H SLIHDDLP +D+D RR KP++H V+G AILAGDAL L
Sbjct: 104 GDRLAAFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPL 163
Query: 180 ALEHVAVNIAGVSPDRVVRA-----IAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEY 234
A +H+ ++ PD V RA I E+ +G G+ AG++VD+ EG L +
Sbjct: 164 AFQHI---VSHTPPDLVPRATILRLITEIARTVGSTGMAAGQYVDL--EGGPFPLS---F 215
Query: 235 IHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGK 294
+ K + E + VCG ++GG E++ +R Y R +G+L+QVVDDI + K S + G
Sbjct: 216 VQEKKFGAMGECSAVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDITEDKKKSYDGGA 275
Query: 295 TAG 297
G
Sbjct: 276 EKG 278
>gi|386759023|ref|YP_006232239.1| geranyltranstransferase [Bacillus sp. JS]
gi|384932305|gb|AFI28983.1| geranyltranstransferase [Bacillus sp. JS]
Length = 296
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 114/271 (42%), Positives = 171/271 (63%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
L P + K+M YSL AGGKR+RPL+ +A G E +P CA+EMIHT SLIHDD
Sbjct: 27 LDMPDSLKKSMLYSLEAGGKRLRPLIVLAVLNAYGKSEQDGIPVGCAVEMIHTYSLIHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAG-VSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+TA+LAGD LL+ + + + +++ VS ++ +R + E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITSHVSDEVSAEKRLRLVNEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
SA G EG+V G+ D+ +E + V+L+ELE IH KTAKLL V+ GA++ ++E
Sbjct: 147 ISAAGTEGMVGGQVADMEAENRQVTLEELESIHERKTAKLLGFCVIAGAILADAPEEDIE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
+R ++ IG+ FQ+ DDILD+ S E++GK G D + K+TYP L+ +E AK
Sbjct: 207 TLRTFSSHIGIGFQIRDDILDLEGSEEKIGKRVGSDTTNDKSTYPSLLSLEGAKRKLDAH 266
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A + + LY L + IA+R +
Sbjct: 267 IKEAKRLIGGLSLQQDL-LYELCDLIAARDH 296
>gi|260548951|ref|ZP_05823173.1| polyprenyl synthetase [Acinetobacter sp. RUH2624]
gi|260557259|ref|ZP_05829475.1| polyprenyl synthetase [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|424054464|ref|ZP_17791988.1| hypothetical protein W9I_02886 [Acinetobacter nosocomialis Ab22222]
gi|425741380|ref|ZP_18859528.1| polyprenyl synthetase [Acinetobacter baumannii WC-487]
gi|260408119|gb|EEX01590.1| polyprenyl synthetase [Acinetobacter sp. RUH2624]
gi|260409365|gb|EEX02667.1| polyprenyl synthetase [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|407439213|gb|EKF45738.1| hypothetical protein W9I_02886 [Acinetobacter nosocomialis Ab22222]
gi|425492384|gb|EKU58643.1| polyprenyl synthetase [Acinetobacter baumannii WC-487]
gi|452952719|gb|EME58146.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter baumannii MSP4-16]
Length = 303
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 118/274 (43%), Positives = 166/274 (60%), Gaps = 10/274 (3%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG-DESWAMPAACALEMIHTMSLIHDDLP 146
P + A+ ++++ GGKRVRP LC A+ L + + A AA A+E+IH SL HDDLP
Sbjct: 33 PEPLKSAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLP 92
Query: 147 FLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNI-----AGVSPDRVVRAIA 201
+DND RR +P H FGE TA+LAGD L S+A E + + G V++ I
Sbjct: 93 CMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQ 152
Query: 202 EMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAV-IGGGNAI 260
+ +A +V G+ +D+ +E K +S ELE IH +KT L++AA++ GAV I G
Sbjct: 153 ILATASS--KMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQ 210
Query: 261 EVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFA 320
+ ++R Y + IGL FQV DDILD+T S+E LGKTAGKD K+TYP LMG+E A+ +A
Sbjct: 211 AIPKLRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQVYA 270
Query: 321 GELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
EL QA E LA+F A L ++ ++ +R N
Sbjct: 271 KELHDQAFEALAHF-GENAKELVEISQFLLARTN 303
>gi|340754750|ref|ZP_08691486.1| geranyltranstransferase [Fusobacterium sp. D12]
gi|421500043|ref|ZP_15947066.1| putative geranyltranstransferase [Fusobacterium necrophorum subsp.
funduliforme Fnf 1007]
gi|313685759|gb|EFS22594.1| geranyltranstransferase [Fusobacterium sp. D12]
gi|402269144|gb|EJU18490.1| putative geranyltranstransferase [Fusobacterium necrophorum subsp.
funduliforme Fnf 1007]
Length = 290
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 104/257 (40%), Positives = 155/257 (60%), Gaps = 2/257 (0%)
Query: 73 EQVNKALDEAVV-LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACA 131
E N+ L+E + PV I + M+Y+ L GGKR+RP L S L+G + + +P A A
Sbjct: 6 EYFNEKLEEILAQYNTPVWIAEGMQYACLQGGKRIRPQLLFMSLALLGKEIALGLPFALA 65
Query: 132 LEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE-HVAVNIAG 190
LEMIH+ SL+HDDLP +DNDE RR + +H+ FGE+ AIL GDALL+ A V ++
Sbjct: 66 LEMIHSYSLVHDDLPAMDNDEYRRGQLTTHKKFGEANAILIGDALLTNAFSVMVRGSMGK 125
Query: 191 VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVC 250
VS ++++ +A GV+G++ G+ +D+A EGK +S K L +IH HKT +LL ++
Sbjct: 126 VSSEKILEIVALFSEYAGVDGMIGGQAMDVAYEGKQISYKTLSFIHEHKTGRLLLLPILV 185
Query: 251 GAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKL 310
++G + + + + Y R IGL FQ+ DDILDV ++GK D K+TYP +
Sbjct: 186 ACILGDASLEQRKALEIYGRNIGLAFQIKDDILDVEGDFTQMGKAVKSDEKLQKSTYPSI 245
Query: 311 MGIENAKSFAGELLGQA 327
G+E +K E L +A
Sbjct: 246 FGLEKSKEMLTESLREA 262
>gi|389681791|ref|ZP_10173135.1| geranyltranstransferase [Pseudomonas chlororaphis O6]
gi|388554326|gb|EIM17575.1| geranyltranstransferase [Pseudomonas chlororaphis O6]
Length = 295
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 127/292 (43%), Positives = 180/292 (61%), Gaps = 5/292 (1%)
Query: 67 YMIRKAEQVNKALDEAVVLQPP--VKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW 124
Y +VN AL+ P ++++AMRYS++ GGKRVRPLL A+CE +G
Sbjct: 5 YQASSQARVNAALETLFHAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGARPEQ 64
Query: 125 AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV 184
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA +
Sbjct: 65 ANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSAL 124
Query: 185 A-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
++ S + ++ ++ + A G G+V G+ +D+ S G + K LEY+H HKT L
Sbjct: 125 LDPRLSDSSAETRLQMVSALALAAGPAGMVGGQAIDLGSVGLKLDQKALEYMHRHKTGAL 184
Query: 244 LEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
+EA+V GA+ G E++ ++ YA+ IGL FQV DDILDV + LGK G D+A
Sbjct: 185 IEASVKLGALASGRAEKDELKSLQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIAR 244
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TYP L+G+E AK++A EL QA+ L F+A A PL LA YI R++
Sbjct: 245 DKPTYPALLGLEAAKAYALELRDQALHALRPFDAG-AEPLRELARYIVERRS 295
>gi|423693797|ref|ZP_17668317.1| geranyltranstransferase [Pseudomonas fluorescens SS101]
gi|387999165|gb|EIK60494.1| geranyltranstransferase [Pseudomonas fluorescens SS101]
Length = 295
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 127/292 (43%), Positives = 183/292 (62%), Gaps = 5/292 (1%)
Query: 67 YMIRKAEQVNKALDEAVVLQPP--VKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW 124
Y +VN AL+ V P ++++AMRYS++ GGKRVRPLL A+CE +G +
Sbjct: 5 YQASSQARVNAALEPLFVAPSPEMTRLYEAMRYSVMNGGKRVRPLLAYAACEALGAPAAE 64
Query: 125 AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV 184
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA +
Sbjct: 65 ANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEAYAILAGDGLQSLAFSAL 124
Query: 185 A-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
++ V+ + +R + + A G G+V G+ +D+ S + K LE++H HKT L
Sbjct: 125 LDPTLSSVNAEIRLRMVTALAHAAGPAGMVGGQAIDMGSVSLKLDQKALEHMHRHKTGAL 184
Query: 244 LEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
+EAAV GA+ G A ++ ++ Y+R +GL FQV DDILDV + LGK G D+A
Sbjct: 185 IEAAVQLGALASGRAGAEQLAALQTYSRAVGLAFQVQDDILDVESDTATLGKRQGADIAR 244
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TYP L+G++ AK++A EL QA+E L F+A+ A PL LA YI R++
Sbjct: 245 DKPTYPALLGLQAAKAYAIELRDQALEALRPFDAA-AEPLRDLARYIVERRH 295
>gi|53722784|ref|YP_111769.1| geranyltranstransferase [Burkholderia pseudomallei K96243]
gi|76817464|ref|YP_336001.1| geranyltranstransferase [Burkholderia pseudomallei 1710b]
gi|126442384|ref|YP_001063528.1| geranyltranstransferase [Burkholderia pseudomallei 668]
gi|126458477|ref|YP_001076425.1| geranyltranstransferase [Burkholderia pseudomallei 1106a]
gi|134278219|ref|ZP_01764933.1| geranyltranstransferase [Burkholderia pseudomallei 305]
gi|167724592|ref|ZP_02407828.1| geranyltranstransferase [Burkholderia pseudomallei DM98]
gi|167743543|ref|ZP_02416317.1| geranyltranstransferase [Burkholderia pseudomallei 14]
gi|167820731|ref|ZP_02452411.1| geranyltranstransferase [Burkholderia pseudomallei 91]
gi|167829090|ref|ZP_02460561.1| geranyltranstransferase [Burkholderia pseudomallei 9]
gi|167850567|ref|ZP_02476075.1| geranyltranstransferase [Burkholderia pseudomallei B7210]
gi|167899160|ref|ZP_02486561.1| geranyltranstransferase [Burkholderia pseudomallei 7894]
gi|167907503|ref|ZP_02494708.1| geranyltranstransferase [Burkholderia pseudomallei NCTC 13177]
gi|167915842|ref|ZP_02502933.1| geranyltranstransferase [Burkholderia pseudomallei 112]
gi|167923681|ref|ZP_02510772.1| geranyltranstransferase [Burkholderia pseudomallei BCC215]
gi|217422667|ref|ZP_03454170.1| geranyltranstransferase [Burkholderia pseudomallei 576]
gi|226195863|ref|ZP_03791450.1| geranyltranstransferase [Burkholderia pseudomallei Pakistan 9]
gi|237509552|ref|ZP_04522267.1| geranyltranstransferase [Burkholderia pseudomallei MSHR346]
gi|242312765|ref|ZP_04811782.1| geranyltranstransferase [Burkholderia pseudomallei 1106b]
gi|254184923|ref|ZP_04891512.1| geranyltranstransferase [Burkholderia pseudomallei 1655]
gi|254186152|ref|ZP_04892670.1| geranyltranstransferase [Burkholderia pseudomallei Pasteur 52237]
gi|254194119|ref|ZP_04900551.1| geranyltranstransferase [Burkholderia pseudomallei S13]
gi|254263700|ref|ZP_04954565.1| geranyltranstransferase [Burkholderia pseudomallei 1710a]
gi|254301205|ref|ZP_04968649.1| geranyltranstransferase [Burkholderia pseudomallei 406e]
gi|52213198|emb|CAH39238.1| geranyltranstransferase [Burkholderia pseudomallei K96243]
gi|76581937|gb|ABA51411.1| geranyltranstransferase [Burkholderia pseudomallei 1710b]
gi|126221875|gb|ABN85380.1| geranyltranstransferase [Burkholderia pseudomallei 668]
gi|126232245|gb|ABN95658.1| geranyltranstransferase [Burkholderia pseudomallei 1106a]
gi|134250003|gb|EBA50083.1| geranyltranstransferase [Burkholderia pseudomallei 305]
gi|157811223|gb|EDO88393.1| geranyltranstransferase [Burkholderia pseudomallei 406e]
gi|157933838|gb|EDO89508.1| geranyltranstransferase [Burkholderia pseudomallei Pasteur 52237]
gi|169650870|gb|EDS83563.1| geranyltranstransferase [Burkholderia pseudomallei S13]
gi|184215515|gb|EDU12496.1| geranyltranstransferase [Burkholderia pseudomallei 1655]
gi|217394898|gb|EEC34917.1| geranyltranstransferase [Burkholderia pseudomallei 576]
gi|225932348|gb|EEH28348.1| geranyltranstransferase [Burkholderia pseudomallei Pakistan 9]
gi|235001757|gb|EEP51181.1| geranyltranstransferase [Burkholderia pseudomallei MSHR346]
gi|242136004|gb|EES22407.1| geranyltranstransferase [Burkholderia pseudomallei 1106b]
gi|254214702|gb|EET04087.1| geranyltranstransferase [Burkholderia pseudomallei 1710a]
Length = 294
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 127/297 (42%), Positives = 175/297 (58%), Gaps = 11/297 (3%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
F+++M E+V AL + P ++H+AMRY++L GGKRVRPLLC A+ EL G
Sbjct: 1 MTFDQWMRSVLERVETALGHYLPAGTVAPAQLHEAMRYAVLGGGKRVRPLLCHAAGELTG 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
E+ A+ ALEMIH SL+HDD+P +D+D RR KP H + E TA+L GDAL S
Sbjct: 61 ASEAARDAASAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEPTALLVGDALQSQ 120
Query: 180 ALEHVAVNIAGVSP-DRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
A VA+ A P DR + E+ A G G+ G+ +D+AS G ++ LE +H
Sbjct: 121 AF--VALTDAAALPADRQAALVRELALASGSIGMAGGQAIDLASVGVALTRDALETMHRM 178
Query: 239 KTAKLLEAAVVCGAVIG---GGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKT 295
KT LL A+V GA+ G G+A+ + YA +GL FQVVDDILDVT S LGKT
Sbjct: 179 KTGALLRASVRMGALAGETPSGDAMRA--LDAYAAAVGLAFQVVDDILDVTTDSATLGKT 236
Query: 296 AGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
AGKD A+ K TY ++G++ +++ A +L A L F A +A L LA+ + +R
Sbjct: 237 AGKDAANDKPTYVSIIGLDASRALAAQLRADAHAALEPFGA-RAQRLAELADLVVNR 292
>gi|381405458|ref|ZP_09930142.1| polyprenyl synthetase [Pantoea sp. Sc1]
gi|380738657|gb|EIB99720.1| polyprenyl synthetase [Pantoea sp. Sc1]
Length = 299
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 114/255 (44%), Positives = 153/255 (60%), Gaps = 4/255 (1%)
Query: 73 EQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAAC 130
+QVN AL + P + AM Y L GGKR+RP L A+ E++ D + A
Sbjct: 12 QQVNAALTRFIAPLPFQSSPLVNAMHYGALLGGKRLRPFLVYATGEMLRADPASLDAPAA 71
Query: 131 ALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVN-IA 189
A+E IH SLIHDDLP +D+D RR +P H +GE TAILAGDAL +LA + +
Sbjct: 72 AVECIHAYSLIHDDLPAMDDDALRRGQPTCHIKYGEDTAILAGDALQTLAFSILTDEAMP 131
Query: 190 GVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVV 249
GVS + +R I+E+ +A GV G+ G+ +D+A+EGK V L +LE IH HKT L+ +AV
Sbjct: 132 GVSAEYRLRMISELANASGVAGMCGGQALDLAAEGKSVDLDQLEQIHRHKTGALIRSAVR 191
Query: 250 CGAVIGGGNAIE-VERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYP 308
GA G E + + YA IGL FQV DDILDV + +GK G D GK+TYP
Sbjct: 192 LGAFTAGDAGREALPLLDRYAEAIGLAFQVQDDILDVVGDTAVIGKRQGADQQLGKSTYP 251
Query: 309 KLMGIENAKSFAGEL 323
L+G+ENA++ A +L
Sbjct: 252 SLLGLENARAKARDL 266
>gi|383318377|ref|YP_005379219.1| geranylgeranyl pyrophosphate synthase [Frateuria aurantia DSM 6220]
gi|379045481|gb|AFC87537.1| geranylgeranyl pyrophosphate synthase [Frateuria aurantia DSM 6220]
Length = 314
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 108/267 (40%), Positives = 159/267 (59%), Gaps = 2/267 (0%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPF 147
P ++H+A+RY+ GGKR+R LL AS E +G ACA+E+IH SL+HDDLP
Sbjct: 50 PHRLHQAIRYAC-RGGKRLRALLVYASGEALGVPLEKLDAPACAVELIHAYSLVHDDLPG 108
Query: 148 LDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAM 207
+DND+ RR +P H + +TAIL GDAL +LA + + + V IA + A
Sbjct: 109 MDNDDLRRGQPTVHIAYDVATAILVGDALQTLAFNLLTDPANALDARQQVAMIASLAHAS 168
Query: 208 GVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRN 267
G G+V G+ VD+ SEG +SL++LE +H KT L+ + A+ G + + +
Sbjct: 169 GPLGMVGGQAVDMESEGASLSLEQLESLHARKTGALIRVSCELAAIAGAASTPVAQALAR 228
Query: 268 YARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQA 327
Y C+GL FQ+ DD+LD T + LGKTAGKD A K+T+P L+G++ A+ A +L QA
Sbjct: 229 YGSCLGLAFQIQDDVLDQTADTATLGKTAGKDQAQQKSTFPSLLGLDTARQRASDLFDQA 288
Query: 328 IEELAYFEASKAAPLYFLANYIASRQN 354
E+A + + APL +LA++I R +
Sbjct: 289 -REIAIEISGQPAPLLWLADFIQKRDH 314
>gi|416891716|ref|ZP_11923263.1| IspA protein [Aggregatibacter aphrophilus ATCC 33389]
gi|347815264|gb|EGY31904.1| IspA protein [Aggregatibacter aphrophilus ATCC 33389]
Length = 311
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 122/269 (45%), Positives = 165/269 (61%), Gaps = 4/269 (1%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPF 147
P + +AM+Y LL GGKR+RP L A+ ++G + + AA A+E IH SLIHDDLP
Sbjct: 45 PAPLVEAMKYGLLLGGKRIRPFLVYATGRILGANLAHLDYAAAAIEAIHAYSLIHDDLPA 104
Query: 148 LDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAM 207
+D+DE RR H F E+TAILAGDAL S A E + +I +S + + I + +A
Sbjct: 105 MDDDELRRGHKTCHIAFDEATAILAGDALQSFAFE-ILTDIPDLSAQQKLALIKTLSAAA 163
Query: 208 GVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIE--VERV 265
GV+G+ G+ +D+ SE K +SL ELE+IH++KT LL AA+ G + A E ++++
Sbjct: 164 GVKGMCLGQSLDLISEQKAISLTELEHIHLNKTGALLTAALKLGFICSPHFADEALLQQL 223
Query: 266 RNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLG 325
YA IGL FQV DDILD+ +SE +GK G DL S K+TYPKL+G+ AK A EL
Sbjct: 224 ERYATAIGLAFQVQDDILDIEGNSETIGKPVGSDLNSDKSTYPKLLGLAGAKQKAQELYE 283
Query: 326 QAIEELAYFEASKAAPLYFLANYIASRQN 354
A+ EL A LY LA +I RQN
Sbjct: 284 TALAELQNLPFDTTA-LYALAEFIIKRQN 311
>gi|319792406|ref|YP_004154046.1| polyprenyl synthetase [Variovorax paradoxus EPS]
gi|315594869|gb|ADU35935.1| Polyprenyl synthetase [Variovorax paradoxus EPS]
Length = 304
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 126/282 (44%), Positives = 175/282 (62%), Gaps = 6/282 (2%)
Query: 74 QVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALE 133
+V AL V ++ PV + AMRY++L GGKR+RPLL +A+ E VGG+E+ A+ AACA E
Sbjct: 24 RVEAALSRWVGVEAPVLLGDAMRYAVLDGGKRLRPLLVLAASEAVGGNEAAALRAACAAE 83
Query: 134 MIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAV---NIAG 190
+IH SL+HDDLP +DND RR KP H FGE+ A+LAGDAL +LA E +A I
Sbjct: 84 LIHAYSLVHDDLPCMDNDVLRRGKPTVHVKFGEADALLAGDALQALAFELLAPEGDEIPA 143
Query: 191 VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVC 250
+ + R +A A G +G+ G+ +D+AS G ++ +L +H KT LL+ +V
Sbjct: 144 ATQATLCRLLAR---AAGSQGMAGGQAIDLASVGIALNETQLREMHRLKTGALLQGSVEM 200
Query: 251 GAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKL 310
GA G +A + +R+Y IGL FQVVDDILDVT S+ LGKTAGKD A+ K TY L
Sbjct: 201 GAACGNVSAAALAALRDYGAAIGLAFQVVDDILDVTADSQTLGKTAGKDAAADKPTYVSL 260
Query: 311 MGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
+G++ A++ A +LL A+ L + A L LA+ + R
Sbjct: 261 LGLDGARTQARQLLADALAALTKSGLADTAALRALAHMVVDR 302
>gi|398891056|ref|ZP_10644496.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM55]
gi|398187291|gb|EJM74635.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM55]
Length = 295
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 125/285 (43%), Positives = 180/285 (63%), Gaps = 5/285 (1%)
Query: 74 QVNKALDEAVVLQPP--VKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACA 131
+VN AL+ P ++++AMRYS++ GGKRVRPLL A+CE +GG A AACA
Sbjct: 12 RVNAALETLFTAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGKAEQANGAACA 71
Query: 132 LEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVA-VNIAG 190
+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA + ++
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAFSALLDPRLSA 131
Query: 191 VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVC 250
+ ++ ++ + A G G+V G+ +D+ S G + K LEY+H HKT L+E +V
Sbjct: 132 SDAEIRLQMVSALALAAGPAGMVGGQAIDLGSVGLKLDQKALEYMHRHKTGALIEVSVKL 191
Query: 251 GAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPK 309
GA+ G E++ ++ YA+ IGL FQV DDILDV +E LGK G D+A K TYP
Sbjct: 192 GALASGRAEKDELKSLQAYAQAIGLAFQVQDDILDVESDTETLGKRQGADIARDKPTYPA 251
Query: 310 LMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L+G++ AK++A EL QA+ L F+A+ A PL LA YI R++
Sbjct: 252 LLGLDAAKAYALELRDQALHALRPFDAA-AEPLRDLARYIVDRRS 295
>gi|385787551|ref|YP_005818660.1| geranyltranstransferase [Erwinia sp. Ejp617]
gi|310766823|gb|ADP11773.1| Geranyltranstransferase [Erwinia sp. Ejp617]
Length = 299
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 123/297 (41%), Positives = 174/297 (58%), Gaps = 10/297 (3%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVK---IHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
F + ++VN AL + + Q P + + AM Y L GGKR+RP L A+ +++
Sbjct: 3 FNLLLTSHYQRVNAAL-QGFISQLPFQSTPLVNAMEYGALLGGKRLRPFLVYATGDMLRA 61
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
+++ A A+E IH SLIHDDLP +DND RR +P H FGE AILAGDAL +LA
Sbjct: 62 NDAALDAPAAAIECIHAYSLIHDDLPAMDNDSLRRGQPTCHIKFGEEAAILAGDALQTLA 121
Query: 181 LEHVA-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
+A + GV + + ++E+ A GV G+ G+ +D+A+EGK V+L ELE IH HK
Sbjct: 122 FSILADAPMPGVVAESRIAMLSELAQASGVAGMCGGQALDLAAEGKQVTLNELEQIHRHK 181
Query: 240 TAKLLEAAVVCGAVIGG--GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
T L+ +AV GA+ G G A + + +A IGL FQV DDILDVT ++E LGK G
Sbjct: 182 TGALIRSAVRLGALTAGERGRA-ALPALDRFANAIGLAFQVQDDILDVTGATEVLGKQQG 240
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEAS--KAAPLYFLANYIASR 352
D GK+TYP LMG++NA+ A EL +++ L A + L LA+++ R
Sbjct: 241 ADQQLGKSTYPALMGLDNARIKAWELCQESLNALDTLAAQSYNTSALRALASFVIER 297
>gi|403674867|ref|ZP_10937091.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter sp. NCTC 10304]
Length = 303
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 118/274 (43%), Positives = 166/274 (60%), Gaps = 10/274 (3%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG-DESWAMPAACALEMIHTMSLIHDDLP 146
P + A+ ++++ GGKRVRP LC A+ L + + A AA A+E+IH SL HDDLP
Sbjct: 33 PEPLKSAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLP 92
Query: 147 FLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNI-----AGVSPDRVVRAIA 201
+DND RR +P H FGE TA+LAGD L S+A E + + G V++ I
Sbjct: 93 CMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDAQGQGTDAAIVLKQIQ 152
Query: 202 EMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAV-IGGGNAI 260
+ +A +V G+ +D+ +E K +S ELE IH +KT L++AA++ GAV I G
Sbjct: 153 ILATASS--KMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQ 210
Query: 261 EVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFA 320
+ ++R Y + IGL FQV DDILD+T S+E LGKTAGKD K+TYP LMG+E A+ +A
Sbjct: 211 AIPKLRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQIYA 270
Query: 321 GELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
EL QA E LA+F A L ++ ++ +R N
Sbjct: 271 KELHDQAFEALAHF-GENAKELVEISQFLLARTN 303
>gi|422945921|ref|ZP_16968174.1| geranyltranstransferase, partial [Fusobacterium nucleatum subsp.
animalis ATCC 51191]
gi|339888494|gb|EGQ77948.1| geranyltranstransferase [Fusobacterium nucleatum subsp. animalis
ATCC 51191]
Length = 259
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 105/257 (40%), Positives = 157/257 (61%), Gaps = 2/257 (0%)
Query: 95 MRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERR 154
M Y++L GGKR+RP L A+ EL+ D + + A ALEMIH+ SL+HDDLP LDND+ R
Sbjct: 1 MEYAVLNGGKRLRPFLLFATLELLNEDINKGVKPAIALEMIHSYSLVHDDLPALDNDDYR 60
Query: 155 RSKPASHEVFGESTAILAGDALLSLALEHVAV-NIAGVSPDRVVRAIAEMCSAMGVEGLV 213
R K +H+VFGE+ IL GD+LL+ A ++ N+ +S ++V I++ G+ G++
Sbjct: 61 RGKLTTHKVFGEAEGILIGDSLLTYAFYVLSQKNLELLSSKQIVNIISKTSEYAGINGMI 120
Query: 214 AGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIG 273
G+ +DI SE K + L+ L+YIH HKT KL++ + +I + + + YA IG
Sbjct: 121 GGQMIDIQSENKKIDLETLKYIHSHKTGKLIKLPIEIACIIANVEDDKKKVLEEYADLIG 180
Query: 274 LLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELA- 332
L FQV DDILDV + E+LGK G D+ KATYP ++G+E +K + + +A + +
Sbjct: 181 LAFQVKDDILDVEGTFEDLGKPVGSDVDLHKATYPSILGMEESKKILNDTVEKAKQIIKN 240
Query: 333 YFEASKAAPLYFLANYI 349
F K L LA++I
Sbjct: 241 KFGEEKGKILISLADFI 257
>gi|169794893|ref|YP_001712686.1| geranyltranstransferase [Acinetobacter baumannii AYE]
gi|213157703|ref|YP_002320501.1| polyprenyl synthetase [Acinetobacter baumannii AB0057]
gi|215482441|ref|YP_002324625.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter baumannii AB307-0294]
gi|301347512|ref|ZP_07228253.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter baumannii AB056]
gi|301512686|ref|ZP_07237923.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter baumannii AB058]
gi|301597254|ref|ZP_07242262.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter baumannii AB059]
gi|332855972|ref|ZP_08436103.1| polyprenyl synthetase [Acinetobacter baumannii 6013150]
gi|332870742|ref|ZP_08439424.1| polyprenyl synthetase [Acinetobacter baumannii 6013113]
gi|417555685|ref|ZP_12206754.1| polyprenyl synthetase [Acinetobacter baumannii Naval-81]
gi|417560169|ref|ZP_12211048.1| polyprenyl synthetase [Acinetobacter baumannii OIFC137]
gi|421198439|ref|ZP_15655604.1| polyprenyl synthetase [Acinetobacter baumannii OIFC109]
gi|421455317|ref|ZP_15904661.1| polyprenyl synthetase [Acinetobacter baumannii IS-123]
gi|421620071|ref|ZP_16061013.1| polyprenyl synthetase [Acinetobacter baumannii OIFC074]
gi|421634937|ref|ZP_16075542.1| polyprenyl synthetase [Acinetobacter baumannii Naval-13]
gi|421642165|ref|ZP_16082691.1| polyprenyl synthetase [Acinetobacter baumannii IS-235]
gi|421647240|ref|ZP_16087659.1| polyprenyl synthetase [Acinetobacter baumannii IS-251]
gi|421650160|ref|ZP_16090540.1| polyprenyl synthetase [Acinetobacter baumannii OIFC0162]
gi|421658083|ref|ZP_16098328.1| polyprenyl synthetase [Acinetobacter baumannii Naval-83]
gi|421673934|ref|ZP_16113870.1| polyprenyl synthetase [Acinetobacter baumannii OIFC065]
gi|421692226|ref|ZP_16131878.1| polyprenyl synthetase [Acinetobacter baumannii IS-116]
gi|421699881|ref|ZP_16139402.1| polyprenyl synthetase [Acinetobacter baumannii IS-58]
gi|421794768|ref|ZP_16230860.1| polyprenyl synthetase [Acinetobacter baumannii Naval-21]
gi|421799478|ref|ZP_16235470.1| polyprenyl synthetase [Acinetobacter baumannii Canada BC1]
gi|421804600|ref|ZP_16240507.1| polyprenyl synthetase [Acinetobacter baumannii WC-A-694]
gi|424058821|ref|ZP_17796314.1| hypothetical protein W9K_03113 [Acinetobacter baumannii Ab33333]
gi|425750513|ref|ZP_18868479.1| polyprenyl synthetase [Acinetobacter baumannii WC-348]
gi|445448908|ref|ZP_21444054.1| polyprenyl synthetase [Acinetobacter baumannii WC-A-92]
gi|445456889|ref|ZP_21446148.1| polyprenyl synthetase [Acinetobacter baumannii OIFC047]
gi|445488898|ref|ZP_21458441.1| polyprenyl synthetase [Acinetobacter baumannii AA-014]
gi|169147820|emb|CAM85683.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP
synthase) [Acinetobacter baumannii AYE]
gi|193078216|gb|ABO13173.2| geranyltranstransferase [Acinetobacter baumannii ATCC 17978]
gi|213056863|gb|ACJ41765.1| polyprenyl synthetase [Acinetobacter baumannii AB0057]
gi|213985840|gb|ACJ56139.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter baumannii AB307-0294]
gi|332727208|gb|EGJ58659.1| polyprenyl synthetase [Acinetobacter baumannii 6013150]
gi|332732037|gb|EGJ63312.1| polyprenyl synthetase [Acinetobacter baumannii 6013113]
gi|395522751|gb|EJG10840.1| polyprenyl synthetase [Acinetobacter baumannii OIFC137]
gi|395565335|gb|EJG26982.1| polyprenyl synthetase [Acinetobacter baumannii OIFC109]
gi|400211555|gb|EJO42517.1| polyprenyl synthetase [Acinetobacter baumannii IS-123]
gi|400392102|gb|EJP59149.1| polyprenyl synthetase [Acinetobacter baumannii Naval-81]
gi|404560118|gb|EKA65363.1| polyprenyl synthetase [Acinetobacter baumannii IS-116]
gi|404571156|gb|EKA76220.1| polyprenyl synthetase [Acinetobacter baumannii IS-58]
gi|404664759|gb|EKB32736.1| hypothetical protein W9K_03113 [Acinetobacter baumannii Ab33333]
gi|408511199|gb|EKK12849.1| polyprenyl synthetase [Acinetobacter baumannii OIFC0162]
gi|408513717|gb|EKK15331.1| polyprenyl synthetase [Acinetobacter baumannii IS-235]
gi|408516676|gb|EKK18247.1| polyprenyl synthetase [Acinetobacter baumannii IS-251]
gi|408701307|gb|EKL46741.1| polyprenyl synthetase [Acinetobacter baumannii OIFC074]
gi|408703203|gb|EKL48605.1| polyprenyl synthetase [Acinetobacter baumannii Naval-13]
gi|408711194|gb|EKL56405.1| polyprenyl synthetase [Acinetobacter baumannii Naval-83]
gi|410385277|gb|EKP37770.1| polyprenyl synthetase [Acinetobacter baumannii OIFC065]
gi|410403124|gb|EKP55225.1| polyprenyl synthetase [Acinetobacter baumannii Naval-21]
gi|410409716|gb|EKP61641.1| polyprenyl synthetase [Acinetobacter baumannii Canada BC1]
gi|410411050|gb|EKP62932.1| polyprenyl synthetase [Acinetobacter baumannii WC-A-694]
gi|425486634|gb|EKU53000.1| polyprenyl synthetase [Acinetobacter baumannii WC-348]
gi|444757365|gb|ELW81890.1| polyprenyl synthetase [Acinetobacter baumannii WC-A-92]
gi|444766892|gb|ELW91146.1| polyprenyl synthetase [Acinetobacter baumannii AA-014]
gi|444777393|gb|ELX01423.1| polyprenyl synthetase [Acinetobacter baumannii OIFC047]
Length = 303
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 118/274 (43%), Positives = 166/274 (60%), Gaps = 10/274 (3%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG-DESWAMPAACALEMIHTMSLIHDDLP 146
P + A+ ++++ GGKRVRP LC A+ L + + A AA A+E+IH SL HDDLP
Sbjct: 33 PEPLKSAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLP 92
Query: 147 FLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNI-----AGVSPDRVVRAIA 201
+DND RR +P H FGE TA+LAGD L S+A E + + G V++ I
Sbjct: 93 CMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQ 152
Query: 202 EMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAV-IGGGNAI 260
+ +A +V G+ +D+ +E K +S ELE IH +KT L++AA++ GAV I G
Sbjct: 153 ILATASS--KMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQ 210
Query: 261 EVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFA 320
+ ++R Y + IGL FQV DDILD+T S+E LGKTAGKD K+TYP LMG+E A+ +A
Sbjct: 211 AIPKLRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQIYA 270
Query: 321 GELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
EL QA E LA+F A L ++ ++ +R N
Sbjct: 271 KELHDQAFEALAHF-GENAKELVEISQFLLARTN 303
>gi|398304512|ref|ZP_10508098.1| geranyltranstransferase [Bacillus vallismortis DV1-F-3]
Length = 296
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 114/271 (42%), Positives = 172/271 (63%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
L P + K+M YSL AGGKR+RPL+ +A G +E +P CA+EMIHT SLIHDD
Sbjct: 27 LDMPDSLKKSMLYSLEAGGKRLRPLIVLAVLNAYGKNEKDGIPVGCAVEMIHTYSLIHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAG-VSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+TA+LAGD LL+ + + + +++ VS ++ +R + E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITSHVSDEVSAEKRLRLVNEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
SA G EG+V G+ D+ +E + V+L+ELE IH KTAKLL V GA++ ++E
Sbjct: 147 ISAAGTEGMVGGQVADMEAENRQVTLEELESIHERKTAKLLGFCVTAGAILADAPEEDIE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
+R ++ IG+ FQ+ DDILD+ S E++GK G D + K+TYP L+ +E AK
Sbjct: 207 TLRTFSSHIGIGFQIRDDILDLEGSEEKIGKRVGSDTTNEKSTYPSLLSLEGAKHKLDVH 266
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A ++ K L+ L + IA+R +
Sbjct: 267 INEAKRLISGLSLQKEL-LFELCDLIAARDH 296
>gi|53716444|ref|YP_105136.1| geranyltranstransferase [Burkholderia mallei ATCC 23344]
gi|67643212|ref|ZP_00441960.1| geranyltranstransferase [Burkholderia mallei GB8 horse 4]
gi|121597567|ref|YP_991106.1| geranyltranstransferase [Burkholderia mallei SAVP1]
gi|124382622|ref|YP_001025504.1| geranyltranstransferase [Burkholderia mallei NCTC 10229]
gi|126446017|ref|YP_001077567.1| geranyltranstransferase [Burkholderia mallei NCTC 10247]
gi|167000281|ref|ZP_02266100.1| geranyltranstransferase [Burkholderia mallei PRL-20]
gi|254177164|ref|ZP_04883820.1| geranyltranstransferase [Burkholderia mallei ATCC 10399]
gi|254203074|ref|ZP_04909436.1| geranyltranstransferase [Burkholderia mallei FMH]
gi|254208407|ref|ZP_04914756.1| geranyltranstransferase [Burkholderia mallei JHU]
gi|254359405|ref|ZP_04975677.1| geranyltranstransferase [Burkholderia mallei 2002721280]
gi|52422414|gb|AAU45984.1| geranyltranstransferase [Burkholderia mallei ATCC 23344]
gi|121225365|gb|ABM48896.1| geranyltranstransferase [Burkholderia mallei SAVP1]
gi|126238871|gb|ABO01983.1| geranyltranstransferase [Burkholderia mallei NCTC 10247]
gi|147746119|gb|EDK53197.1| geranyltranstransferase [Burkholderia mallei FMH]
gi|147751094|gb|EDK58162.1| geranyltranstransferase [Burkholderia mallei JHU]
gi|148028592|gb|EDK86552.1| geranyltranstransferase [Burkholderia mallei 2002721280]
gi|160698204|gb|EDP88174.1| geranyltranstransferase [Burkholderia mallei ATCC 10399]
gi|238524497|gb|EEP87930.1| geranyltranstransferase [Burkholderia mallei GB8 horse 4]
gi|243063768|gb|EES45954.1| geranyltranstransferase [Burkholderia mallei PRL-20]
gi|261826895|gb|ABN00184.2| geranyltranstransferase [Burkholderia mallei NCTC 10229]
Length = 294
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 127/297 (42%), Positives = 175/297 (58%), Gaps = 11/297 (3%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
F+++M E+V AL + P ++H+AMRY++L GGKRVRPLLC A+ EL G
Sbjct: 1 MTFDQWMRSVLERVETALGHYLPAGTVAPAQLHEAMRYAVLGGGKRVRPLLCHAAGELTG 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
E+ A+ ALEMIH SL+HDD+P +D+D RR KP H + E TA+L GDAL S
Sbjct: 61 ASEAARDAASAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEPTALLVGDALQSQ 120
Query: 180 ALEHVAVNIAGVSP-DRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
A VA+ A P DR + E+ A G G+ G+ +D+AS G ++ LE +H
Sbjct: 121 AF--VALTDAAALPADRQAALVRELALASGSIGMAGGQAIDLASVGVALTRDALEKMHRM 178
Query: 239 KTAKLLEAAVVCGAVIG---GGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKT 295
KT LL A+V GA+ G G+A+ + YA +GL FQVVDDILDVT S LGKT
Sbjct: 179 KTGALLRASVRMGALAGETPSGDAMRA--LDAYAAAVGLAFQVVDDILDVTTDSATLGKT 236
Query: 296 AGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
AGKD A+ K TY ++G++ +++ A +L A L F A +A L LA+ + +R
Sbjct: 237 AGKDAANDKPTYVSIIGLDASRALAAQLRADAHAALEPFGA-RAQRLAELADLVVNR 292
>gi|398886802|ref|ZP_10641656.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM60]
gi|398187957|gb|EJM75280.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM60]
Length = 295
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 126/285 (44%), Positives = 179/285 (62%), Gaps = 5/285 (1%)
Query: 74 QVNKALDEAVVLQPP--VKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACA 131
+VN AL+ P ++++AMRYS++ GGKRVRPLL A+CE +GG A AACA
Sbjct: 12 RVNAALETLFNAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGKPEQANGAACA 71
Query: 132 LEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGV 191
+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA +
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAFSALLDPRLST 131
Query: 192 SPDRV-VRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVC 250
S + ++ ++ + A G G+V G+ +D+ S G + K LEY+H HKT L+E +V
Sbjct: 132 SDAEIRLQMVSALALAAGPAGMVGGQAIDLGSVGLKLDQKALEYMHRHKTGALIEVSVKL 191
Query: 251 GAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPK 309
GA+ G E++ ++ YA+ IGL FQV DDILDV +E LGK G D+A K TYP
Sbjct: 192 GALASGRAEKDELKSLQTYAQAIGLAFQVQDDILDVESDTETLGKRQGADIARDKPTYPA 251
Query: 310 LMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L+G++ AK++A EL QA+ L F+A+ A PL LA YI R++
Sbjct: 252 LLGLDAAKAYALELRDQALHALRPFDAA-AEPLRDLARYIVERRS 295
>gi|443631721|ref|ZP_21115901.1| hypothetical protein BSI_09720 [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443347836|gb|ELS61893.1| hypothetical protein BSI_09720 [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 296
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 107/234 (45%), Positives = 157/234 (67%), Gaps = 1/234 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
L P + K+M YSL AGGKR+RPL+ +A G E +P CA+EMIHT SLIHDD
Sbjct: 27 LDMPDSLKKSMLYSLEAGGKRLRPLIVLAVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAG-VSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+TA+LAGD LL+ + + + +++ VS ++ +R + E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITSHVSDEVSAEKRLRLVNEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
SA G EG+V G+ D+ +E + V+L+ELE IH KTAKLL V+ GA++ ++E
Sbjct: 147 ISAAGTEGMVGGQVADMEAENRQVTLEELESIHERKTAKLLGFCVIAGAILADAPEEDIE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAK 317
+R ++ IG+ FQ+ DDILD+ S E++GK G D + K+TYP L+ +E AK
Sbjct: 207 TLRTFSSHIGIGFQIRDDILDLEGSEEKIGKRVGSDTTNDKSTYPSLLSLEGAK 260
>gi|339485460|ref|YP_004699988.1| polyprenyl synthetase [Pseudomonas putida S16]
gi|338836303|gb|AEJ11108.1| polyprenyl synthetase [Pseudomonas putida S16]
Length = 295
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 119/267 (44%), Positives = 166/267 (62%), Gaps = 3/267 (1%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLD 149
+++ AMRYS++ GGKRVRPLL A+CE +G A AACA+E+IH SL+HDDLP +D
Sbjct: 30 RLYAAMRYSVMNGGKRVRPLLAYAACEALGAPAEQANGAACAVELIHAYSLVHDDLPAMD 89
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAE-MCSAMG 208
+D+ RR +P +H+ F E+ AILAGD L SLA + D + A+ + + A G
Sbjct: 90 DDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLDPRLSPQDDNIRLAMVQALAKAAG 149
Query: 209 VEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGG-GNAIEVERVRN 267
G+V G+ +D+ S G + + LE++H HKT L+EA+V GA+ +++ ++
Sbjct: 150 PAGMVGGQAIDLGSVGLKLDQQALEFMHRHKTGALIEASVRLGALASARAEQAQLDALQT 209
Query: 268 YARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQA 327
YA+ IGL FQV DDILDV + LGK G D+A K TYP L+G+E AK++A EL QA
Sbjct: 210 YAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLEAAKAYAIELRDQA 269
Query: 328 IEELAYFEASKAAPLYFLANYIASRQN 354
+ L F KA PL LA YI R+N
Sbjct: 270 LVALQGF-GEKAEPLRALARYIVERRN 295
>gi|423205490|ref|ZP_17192046.1| hypothetical protein HMPREF1168_01681 [Aeromonas veronii AMC34]
gi|404624031|gb|EKB20876.1| hypothetical protein HMPREF1168_01681 [Aeromonas veronii AMC34]
Length = 296
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 116/270 (42%), Positives = 158/270 (58%), Gaps = 9/270 (3%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLD 149
++ AM Y LL GGKRVRP L A E++G A A+E IH SL+HDDLP +D
Sbjct: 31 RLRDAMSYGLLLGGKRVRPFLVYAVGEMLGVKSELLDGPAAAVECIHAYSLLHDDLPAMD 90
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRV----VRAIAEMCS 205
ND+ RR +P H+ F E TAILAGDAL +LA +A + PD + VR ++ +
Sbjct: 91 NDDLRRGQPTVHKAFDEGTAILAGDALQTLAFSILADH---PMPDTLMANRVRMLSTLAR 147
Query: 206 AMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGG-NAIEVER 264
A G G+ G+ +D+ +EG+ +SL ELE +H HKT L+E AV GA+ + +
Sbjct: 148 ASGYLGMCGGQALDLQAEGRQISLAELEQVHRHKTGALIECAVALGALCKADVDDATLAA 207
Query: 265 VRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELL 324
++ YA IGL FQV DDILD+T + LGK G DLA K+TYP L+G+ENA+ A EL
Sbjct: 208 LQTYAAAIGLAFQVQDDILDITGDTATLGKPQGSDLALEKSTYPALLGLENARELARELH 267
Query: 325 GQAIEELAYFEASKAAPLYFLANYIASRQN 354
G+A+ L + L A+YI R +
Sbjct: 268 GKALTALQSLPYNTDI-LEAFADYIIERTH 296
>gi|330830903|ref|YP_004393855.1| Geranyltranstransferase [Aeromonas veronii B565]
gi|406675879|ref|ZP_11083065.1| hypothetical protein HMPREF1170_01273 [Aeromonas veronii AMC35]
gi|423208452|ref|ZP_17195006.1| hypothetical protein HMPREF1169_00524 [Aeromonas veronii AER397]
gi|328806039|gb|AEB51238.1| Geranyltranstransferase [Aeromonas veronii B565]
gi|404618297|gb|EKB15217.1| hypothetical protein HMPREF1169_00524 [Aeromonas veronii AER397]
gi|404626102|gb|EKB22912.1| hypothetical protein HMPREF1170_01273 [Aeromonas veronii AMC35]
Length = 296
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 116/270 (42%), Positives = 158/270 (58%), Gaps = 9/270 (3%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLD 149
++ AM Y LL GGKRVRP L A E++G A A+E IH SL+HDDLP +D
Sbjct: 31 RLRDAMSYGLLLGGKRVRPFLVYAVGEMLGVKSELLDGPAAAVECIHAYSLLHDDLPAMD 90
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRV----VRAIAEMCS 205
ND+ RR +P H+ F E TAILAGDAL +LA +A + PD + VR ++ +
Sbjct: 91 NDDLRRGQPTVHKAFDEGTAILAGDALQTLAFSILADH---PMPDSLMANRVRMLSTLAR 147
Query: 206 AMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGG-NAIEVER 264
A G G+ G+ +D+ +EG+ +SL ELE +H HKT L+E AV GA+ + +
Sbjct: 148 ASGYLGMCGGQALDLQAEGRQISLAELEQVHRHKTGALIECAVALGALCKADVDDATLAA 207
Query: 265 VRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELL 324
++ YA IGL FQV DDILD+T + LGK G DLA K+TYP L+G+ENA+ A EL
Sbjct: 208 LQTYAAAIGLAFQVQDDILDITGDTATLGKPQGSDLALEKSTYPALLGLENARELARELH 267
Query: 325 GQAIEELAYFEASKAAPLYFLANYIASRQN 354
G+A+ L + L A+YI R +
Sbjct: 268 GKALTALQSLPYNTDI-LEAFADYIIERTH 296
>gi|426411713|ref|YP_007031812.1| geranyltranstransferase [Pseudomonas sp. UW4]
gi|426269930|gb|AFY22007.1| geranyltranstransferase [Pseudomonas sp. UW4]
Length = 295
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 126/285 (44%), Positives = 179/285 (62%), Gaps = 5/285 (1%)
Query: 74 QVNKALDEAVVLQPP--VKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACA 131
+VN AL+ P ++++AMRYS++ GGKRVRPLL A+CE +GG A AACA
Sbjct: 12 RVNAALETLFTAPGPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGKAEQANGAACA 71
Query: 132 LEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGV 191
+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA +
Sbjct: 72 VELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAFSALLDPRLST 131
Query: 192 SPDRV-VRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVC 250
S + ++ ++ + A G G+V G+ +D+ S G + K LEY+H HKT L+EA+V
Sbjct: 132 SDAEIRLQMVSALALAAGPAGMVGGQAIDLGSVGLKLDQKALEYMHRHKTGALIEASVKL 191
Query: 251 GAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPK 309
GA+ G E++ ++ YA+ IGL FQV DDILDV + LGK G D+A K TYP
Sbjct: 192 GALASGRAEKDELKSLQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPA 251
Query: 310 LMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
L+G++ AK++A EL QA+ L F+A+ A PL LA YI R++
Sbjct: 252 LLGLDAAKAYALELRDQALHALRPFDAA-AEPLRDLARYIVDRRS 295
>gi|423097572|ref|ZP_17085368.1| geranyltranstransferase [Pseudomonas fluorescens Q2-87]
gi|397885817|gb|EJL02300.1| geranyltranstransferase [Pseudomonas fluorescens Q2-87]
Length = 295
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 127/292 (43%), Positives = 179/292 (61%), Gaps = 5/292 (1%)
Query: 67 YMIRKAEQVNKALDEAVVLQPP--VKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW 124
Y +VN ALD P ++++AMRYS++ GGKRVRPLL A+CE +G
Sbjct: 5 YQASSQARVNAALDTLFTAPSPELSRLYEAMRYSVMNGGKRVRPLLAYAACEALGSQPEQ 64
Query: 125 AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV 184
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA +
Sbjct: 65 ANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAFSAL 124
Query: 185 AVNIAGVSPDRV-VRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
P ++ + ++ + A G G+V G+ +D+ S G + LEY+H HKT L
Sbjct: 125 LDPALSDCPVQIRLEMVSALALAAGPAGMVGGQAIDLGSVGLKLDQSALEYMHRHKTGAL 184
Query: 244 LEAAVVCGAVIGGGNAIE-VERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
+EA+V GA+ G E ++ ++ YAR IGL FQV DDILDV ++ LGK G D+A
Sbjct: 185 IEASVKLGALASGRATPEQLQALQTYARAIGLAFQVQDDILDVESDTQTLGKRQGADIAR 244
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TYP L+G++ AK++A EL QA+ L F+A+ A PL LA YI R++
Sbjct: 245 DKPTYPALLGLDAAKAYALELRDQALAVLRPFDAA-AEPLRDLARYIVERRS 295
>gi|387121993|ref|YP_006287876.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|415756051|ref|ZP_11480961.1| farnesyl-diphosphate synthase [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|416038200|ref|ZP_11574060.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
serotype a str. H5P1]
gi|416048348|ref|ZP_11576289.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
gi|416054053|ref|ZP_11579039.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
serotype e str. SCC393]
gi|416068222|ref|ZP_11582701.1| farnesyl-diphosphate synthase [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|429732219|ref|ZP_19266837.1| putative geranyltranstransferase [Aggregatibacter
actinomycetemcomitans Y4]
gi|347993223|gb|EGY34599.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
gi|347995142|gb|EGY36353.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
serotype a str. H5P1]
gi|348001256|gb|EGY42007.1| farnesyl-diphosphate synthase [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|348003826|gb|EGY44379.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
serotype e str. SCC393]
gi|348655889|gb|EGY71315.1| farnesyl-diphosphate synthase [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|385876485|gb|AFI88044.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|429156846|gb|EKX99466.1| putative geranyltranstransferase [Aggregatibacter
actinomycetemcomitans Y4]
Length = 296
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 120/264 (45%), Positives = 167/264 (63%), Gaps = 4/264 (1%)
Query: 93 KAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDE 152
+AM+Y LL GGKR+RP L A+ +++G D + AA A+E IH SLIHDDLP +D+DE
Sbjct: 35 EAMKYGLLLGGKRIRPFLVYATGKMLGADMAHLDYAAAAIEAIHAYSLIHDDLPAMDDDE 94
Query: 153 RRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGL 212
RR H F E+TAILAGDAL +LA E + +I +S ++ + I + +A GV+G+
Sbjct: 95 LRRGHQTCHIAFDEATAILAGDALQTLAFE-ILTDIPHLSAEQKLMLIKTLSAAAGVKGM 153
Query: 213 VAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGG--GNAIEVERVRNYAR 270
G+ +D+ SE K +SL+ELE IH++KT LL AA+ G + +A +++ YA
Sbjct: 154 CLGQSLDLISEQKIISLQELEQIHLNKTGALLTAALKMGFICSPHFADAALAQQLERYAT 213
Query: 271 CIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEE 330
IGL FQV DDILD+ S LGKT G DL + K+TYPKL+G+E AK A EL +A+ E
Sbjct: 214 AIGLAFQVQDDILDIEGDSATLGKTTGSDLTADKSTYPKLLGLEGAKQKALELYERALTE 273
Query: 331 LAYFEASKAAPLYFLANYIASRQN 354
L + A LY LA +I R++
Sbjct: 274 LKNLPFNTTA-LYALAEFIVKRKS 296
>gi|407070646|ref|ZP_11101484.1| geranyltranstransferase [Vibrio cyclitrophicus ZF14]
Length = 294
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 165/290 (56%), Gaps = 5/290 (1%)
Query: 67 YMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAM 126
Y R EQ+N LD + + AMRY LL GGKR RP L + E++G
Sbjct: 8 YQARNNEQLNLWLDR--LPHQNQNLINAMRYGLLLGGKRARPFLVYITGEMLGCTAEELD 65
Query: 127 PAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAV 186
A A+E IH SLIHDDLP +D+DE RR H F E+TAIL GDAL +LA +A
Sbjct: 66 TPASAIECIHAYSLIHDDLPAMDDDELRRGHQTCHIKFDEATAILTGDALQTLAFTILAE 125
Query: 187 -NIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLE 245
++ VR I + A G +G+ G+ +DI +E + V+L+ELE +H +KT L++
Sbjct: 126 GTLSADGESNRVRMIQRLAEASGAQGMCIGQALDIEAENRAVTLEELEEVHRNKTGALMK 185
Query: 246 AAVVCGAVIGGGNAIEV-ERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGK 304
+A+ GA+ G A+EV ++ YA IGL FQV DDILD+T +E LGK G D K
Sbjct: 186 SAIRLGALAAGEKALEVMPQLDRYADAIGLAFQVQDDILDITSDTETLGKPQGSDQELNK 245
Query: 305 ATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+TYP L+G+E A+ A LL +A++ LA + + L A Y+ R+N
Sbjct: 246 STYPSLLGLEGAQEKAQTLLQEALQALAAIPYNTQS-LEEFARYVIERKN 294
>gi|387895861|ref|YP_006326158.1| geranyltranstransferase [Pseudomonas fluorescens A506]
gi|387159986|gb|AFJ55185.1| geranyltranstransferase [Pseudomonas fluorescens A506]
Length = 295
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 126/292 (43%), Positives = 184/292 (63%), Gaps = 5/292 (1%)
Query: 67 YMIRKAEQVNKALDEAVVLQPP--VKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW 124
Y +VN AL+ V P ++++AMRYS++ GGKRVRPLL A+CE +G +
Sbjct: 5 YQASSQARVNAALEPLFVAPSPEMTRLYEAMRYSVMNGGKRVRPLLAYAACEALGAPAAE 64
Query: 125 AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV 184
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA +
Sbjct: 65 ANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEAYAILAGDGLQSLAFSAL 124
Query: 185 A-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
++ V+ + +R + + A G G+V G+ +D+ S + K LE++H HKT L
Sbjct: 125 LDPTLSSVNAEIRLRMVTALAHAAGPAGMVGGQAIDMGSVSLKLDQKALEHMHRHKTGAL 184
Query: 244 LEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
+EAAV GA+ G +A ++ ++ Y+R +GL FQV DDILDV + LGK G D+A
Sbjct: 185 IEAAVQLGALASGRADAEQLAALQTYSRAVGLAFQVQDDILDVESDTATLGKRQGADIAR 244
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TYP L+G++ AK++A EL QA++ L F+A+ A PL LA YI R++
Sbjct: 245 DKPTYPALLGLQAAKAYAIELRDQALDALRPFDAA-AEPLRDLARYIVERRH 295
>gi|373115249|ref|ZP_09529425.1| hypothetical protein HMPREF0995_00261 [Lachnospiraceae bacterium
7_1_58FAA]
gi|371670541|gb|EHO35620.1| hypothetical protein HMPREF0995_00261 [Lachnospiraceae bacterium
7_1_58FAA]
Length = 293
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 117/268 (43%), Positives = 164/268 (61%), Gaps = 1/268 (0%)
Query: 87 PPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLP 146
P ++ AMRYSLL GGKR+RP+L + +C L GG A+P A A+EM+HT SLIHDDLP
Sbjct: 27 PRGNLYDAMRYSLLTGGKRLRPVLVLEACRLCGGAVEDALPFAGAIEMVHTYSLIHDDLP 86
Query: 147 FLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSA 206
+D+D+ RR +P +H+VFGE+ A+LAGD LL+ A E + + P+RV+ A + A
Sbjct: 87 CMDDDDLRRGRPTNHKVFGEANAVLAGDGLLTAAFETMLAPGQKLPPERVLEAAGILARA 146
Query: 207 MGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVR 266
G G+V G+ +D+A EG+ + L E+E + KT L+ AAV G + GG + E +
Sbjct: 147 AGGRGMVGGQVLDMAGEGRALGLTEVEELQRLKTGALIRAAVEMGCAVAGGAEEQREALC 206
Query: 267 NYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQ 326
YA C+GL FQ+ DDILDV LGK G D+ S K T+ L G+ + + EL +
Sbjct: 207 RYADCLGLAFQIQDDILDVVGDEATLGKPIGSDVRSDKTTFVALKGLADCRILVAELTDR 266
Query: 327 AIEELAYFEASKAAPLYFLANYIASRQN 354
A+E LA F S+A L LA +A R+
Sbjct: 267 AVEALAPF-GSEAESLRGLAQSLAGREK 293
>gi|355639277|ref|ZP_09051079.1| hypothetical protein HMPREF1030_00165 [Pseudomonas sp. 2_1_26]
gi|421168156|ref|ZP_15626265.1| geranyltranstransferase [Pseudomonas aeruginosa ATCC 700888]
gi|354832132|gb|EHF16133.1| hypothetical protein HMPREF1030_00165 [Pseudomonas sp. 2_1_26]
gi|404531451|gb|EKA41405.1| geranyltranstransferase [Pseudomonas aeruginosa ATCC 700888]
Length = 295
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 131/293 (44%), Positives = 174/293 (59%), Gaps = 7/293 (2%)
Query: 67 YMIRKAEQVNKALDEAVVLQPP---VKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
Y R +V+ ALD A+ + P ++++AMRYS++ GGKRVRPLL A+CE +GG
Sbjct: 5 YQARCQARVDAALD-ALFVAPREELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQ 63
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H F E+TAILA D L +LA E
Sbjct: 64 RADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFEV 123
Query: 184 VAVNIAGVSPDRV-VRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAK 242
+A V + + + A G G+V G+ +D+ S G + LE +H HKT
Sbjct: 124 LADTRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVMHRHKTGA 183
Query: 243 LLEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLA 301
L+EA+V GA+ G + + YA IGL FQV DDILDV + LGKT GKD A
Sbjct: 184 LIEASVRLGALASGRAEPAALAALERYAEAIGLAFQVQDDILDVESDTATLGKTQGKDQA 243
Query: 302 SGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TYP L+G+E AK +A EL QA+ L F S A PL LA YI R+N
Sbjct: 244 HNKPTYPALLGLEAAKGYALELRDQALAALDGFPPS-ADPLRQLARYIVERRN 295
>gi|421524820|ref|ZP_15971441.1| polyprenyl synthetase [Pseudomonas putida LS46]
gi|402751283|gb|EJX11796.1| polyprenyl synthetase [Pseudomonas putida LS46]
Length = 295
Score = 197 bits (500), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 118/267 (44%), Positives = 166/267 (62%), Gaps = 3/267 (1%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLD 149
+++ AMRYS++ GGKRVRPLL A+CE +G A AACA+E+IH SL+HDDLP +D
Sbjct: 30 RLYAAMRYSVMNGGKRVRPLLAYAACEALGAPAEQANGAACAVELIHAYSLVHDDLPAMD 89
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAE-MCSAMG 208
+D+ RR +P +H+ F E+ AILAGD L SLA + D + A+ + + A G
Sbjct: 90 DDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLDPCLSPQIDSIRLAMVQVLAKAAG 149
Query: 209 VEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGG-GNAIEVERVRN 267
G+V G+ +D+ S G+ + + LE++H HKT L+EA+V GA+ +++ ++
Sbjct: 150 PAGMVGGQAIDLGSVGQKLDQQALEFMHRHKTGALIEASVRLGALASARAEQAQLDALQT 209
Query: 268 YARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQA 327
YA+ IGL FQV DDILDV + LGK G D+A K TYP L+G+E AK++A EL QA
Sbjct: 210 YAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLEAAKAYAIELRDQA 269
Query: 328 IEELAYFEASKAAPLYFLANYIASRQN 354
+ L F A PL LA YI R+N
Sbjct: 270 LAALQGF-GETAEPLRALARYIVERRN 295
>gi|347753252|ref|YP_004860817.1| polyprenyl synthetase [Bacillus coagulans 36D1]
gi|347585770|gb|AEP02037.1| Polyprenyl synthetase [Bacillus coagulans 36D1]
Length = 289
Score = 197 bits (500), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 110/247 (44%), Positives = 162/247 (65%), Gaps = 2/247 (0%)
Query: 73 EQVNKALDEAVV-LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACA 131
+++ K L + + L+ P + AM YSL AGGKR+RPLL +++ +G M ACA
Sbjct: 9 KEIEKHLAQYIADLRAPAVLKDAMHYSLQAGGKRIRPLLLLSTVSALGKPAGRGMQTACA 68
Query: 132 LEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGV 191
+EM+HT SLIHDDLP +D+D+ RR KP +H+VFGE+ AILAGD LL+ + +A + G+
Sbjct: 69 VEMLHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEAVAILAGDGLLTHSFRLIAED-PGL 127
Query: 192 SPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCG 251
V+ IA + + G EG+VAG+ D+ E K ++L+EL+YIH HKT KLL +V+ G
Sbjct: 128 DDALKVKLIALLAKSAGPEGMVAGQVADMEGENKTLTLEELQYIHAHKTGKLLRFSVLAG 187
Query: 252 AVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLM 311
A+IGG + ++E+ +A +GL FQ+ DDILD+ E++GK G D + K+TYP L+
Sbjct: 188 AMIGGASTEQLEKFGQFADHLGLAFQIRDDILDIEGEQEKIGKRVGSDESRHKSTYPALL 247
Query: 312 GIENAKS 318
+E AK
Sbjct: 248 TLEGAKQ 254
>gi|349610533|ref|ZP_08889877.1| hypothetical protein HMPREF1028_01852 [Neisseria sp. GT4A_CT1]
gi|348609804|gb|EGY59527.1| hypothetical protein HMPREF1028_01852 [Neisseria sp. GT4A_CT1]
Length = 298
Score = 197 bits (500), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 113/270 (41%), Positives = 166/270 (61%), Gaps = 3/270 (1%)
Query: 86 QPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDL 145
Q P +H+AMRY L GGKR+RPLL +A+ EL D++ A A+EM+H SL+HDD+
Sbjct: 31 QVPHTLHEAMRYVTLGGGKRLRPLLVLAASELGDADQNAVEQAMAAIEMVHVYSLVHDDM 90
Query: 146 PFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCS 205
P +DND RR KP H + E+TA+L GDAL + A + V G+ +R + ++ +
Sbjct: 91 PAMDNDSLRRGKPTCHVKYDEATALLVGDALQTQAFD-VLSRPTGLPAERQIAMLSTLAK 149
Query: 206 AMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGG-NAIEVER 264
A G G+ G+ +D+A+ GK ++ +LE +H KT L+ AAVV GA+ ++ +V
Sbjct: 150 ASGSLGMAGGQAIDLANVGKAMNQAQLEQMHSLKTGALIRAAVVLGALACPDLDSDDVRT 209
Query: 265 VRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELL 324
+ NYA +GL FQV+DD+LD + LGKTAGKD + K TY KLMG++ A+++A L
Sbjct: 210 LDNYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDSDNNKPTYVKLMGLQAARTYAETLT 269
Query: 325 GQAIEELAYFEASKAAPLYFLANYIASRQN 354
+A L F A KA L LA ++ +R+N
Sbjct: 270 AEAAALLEPFGA-KALHLRLLAEFVTARKN 298
>gi|251792484|ref|YP_003007210.1| geranyltranstransferase [Aggregatibacter aphrophilus NJ8700]
gi|422336038|ref|ZP_16417011.1| geranyltranstransferase [Aggregatibacter aphrophilus F0387]
gi|247533877|gb|ACS97123.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Aggregatibacter aphrophilus NJ8700]
gi|353346224|gb|EHB90509.1| geranyltranstransferase [Aggregatibacter aphrophilus F0387]
Length = 296
Score = 197 bits (500), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 122/269 (45%), Positives = 165/269 (61%), Gaps = 4/269 (1%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPF 147
P + +AM+Y LL GGKR+RP L A+ ++G + + AA A+E IH SLIHDDLP
Sbjct: 30 PAPLVEAMKYGLLLGGKRIRPFLVYATGRILGANLAHLDYAAAAIEAIHAYSLIHDDLPA 89
Query: 148 LDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAM 207
+D+DE RR H F E+TAILAGDAL S A E + +I +S + + I + +A
Sbjct: 90 MDDDELRRGHKTCHIAFDEATAILAGDALQSFAFE-ILTDIPDLSAQQKLALIKTLSAAA 148
Query: 208 GVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIE--VERV 265
GV+G+ G+ +D+ SE K +SL ELE+IH++KT LL AA+ G + A E ++++
Sbjct: 149 GVKGMCLGQSLDLISEQKAISLTELEHIHLNKTGALLTAALKLGFICSPHFADEALLQQL 208
Query: 266 RNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLG 325
YA IGL FQV DDILD+ +SE +GK G DL S K+TYPKL+G+ AK A EL
Sbjct: 209 ERYATAIGLAFQVQDDILDIEGNSETIGKPVGSDLNSDKSTYPKLLGLAGAKQKAQELYE 268
Query: 326 QAIEELAYFEASKAAPLYFLANYIASRQN 354
A+ EL A LY LA +I RQN
Sbjct: 269 TALAELQNLPFDTTA-LYALAEFIIKRQN 296
>gi|395788884|ref|ZP_10468423.1| hypothetical protein ME9_00140 [Bartonella taylorii 8TBB]
gi|395431749|gb|EJF97761.1| hypothetical protein ME9_00140 [Bartonella taylorii 8TBB]
Length = 300
Score = 197 bits (500), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 116/298 (38%), Positives = 165/298 (55%), Gaps = 8/298 (2%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQ-------PPVKIHKAMRYSLLAGGKRVRPLLCIASCE 116
F + A V K LD + Q P + KAMRY +L GGKR+RP L + S
Sbjct: 4 FTTLLAEHAHTVEKRLDTLLSDQVQTGEIARPETLIKAMRYGVLNGGKRLRPFLVMQSAA 63
Query: 117 LVGGDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDAL 176
L ++ ACALE +H SLIHDDLP +DND RR KP H F E+TAILAG+AL
Sbjct: 64 LFDIPAEHSLDIACALECVHCYSLIHDDLPAMDNDTLRRGKPTVHRAFDEATAILAGNAL 123
Query: 177 LSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIH 236
L+ A E +A + + D ++ + + + G+ G+V G+ +D+ +E K + +
Sbjct: 124 LTFAFEIIAHKASTLPFDTRIKLVTALAQSAGIGGMVGGQMLDLEAEKKPQESTNIITLQ 183
Query: 237 VHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTA 296
KTA L+ A GA+IG + E++ + +GL FQ+ DD+LDVT SE LGKT
Sbjct: 184 RMKTAALISFACQAGAIIGNASKEFTEKLAAFGTYLGLAFQLTDDLLDVTAKSEILGKTV 243
Query: 297 GKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
GKD + KAT+ +L GIE + EL+ +A E L + +KA PL A + A+R+N
Sbjct: 244 GKDKTAHKATFVRLYGIEETQKKRDELIAKA-EVLLHPFGAKAKPLQQAARFSATRKN 300
>gi|167842189|ref|ZP_02468873.1| geranyltranstransferase [Burkholderia thailandensis MSMB43]
Length = 294
Score = 197 bits (500), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 127/297 (42%), Positives = 176/297 (59%), Gaps = 11/297 (3%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQP--PVKIHKAMRYSLLAGGKRVRPLLCIASCELVG 119
F+++M E+V AL + + P ++H+AMRY++L GGKRVRPLLC A+ EL G
Sbjct: 1 MTFDQWMRSVLERVETALGHYLPAETVAPAQLHEAMRYAVLGGGKRVRPLLCHAAGELTG 60
Query: 120 GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSL 179
E+ A+ ALEMIH SL+HDD+P +D+D RR KP H + E TA+L GDAL S
Sbjct: 61 ASEAALNAASSALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEPTALLVGDALQSQ 120
Query: 180 ALEHVAVNIAGVSP-DRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
A VA+ A P DR + E+ A G G+ G+ +D+AS G ++ LE +H
Sbjct: 121 AF--VALTDAAALPADRQAALVCELALASGSIGMAGGQAIDLASVGVALTRDALETMHRM 178
Query: 239 KTAKLLEAAVVCGAVIG---GGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKT 295
KT LL A+V GA+ G G+A+ + YA +GL FQVVDDILDVT S LGKT
Sbjct: 179 KTGALLRASVRMGALAGETPSGDAMRA--LDAYAAAVGLAFQVVDDILDVTTDSATLGKT 236
Query: 296 AGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASR 352
AGKD A+ K TY ++G++ +++ A +L A L F A +A L LA+ + +R
Sbjct: 237 AGKDAANDKPTYVSIIGLDASRALAAQLRADAHAALEPFGA-RAQRLAELADLVVNR 292
>gi|423016477|ref|ZP_17007198.1| geranyltranstransferase [Achromobacter xylosoxidans AXX-A]
gi|338780419|gb|EGP44827.1| geranyltranstransferase [Achromobacter xylosoxidans AXX-A]
Length = 303
Score = 197 bits (500), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 112/272 (41%), Positives = 163/272 (59%), Gaps = 14/272 (5%)
Query: 62 FPFEEYMIRKAEQVNKALDEAVVLQP----PVKIHKAMRYSLLAGGKRVRPLLCIAS--- 114
F E++ + V LD+ +L P P ++H+AMRY++L GGKRVR L A+
Sbjct: 6 LAFPEWLQGRVRHVEDVLDD--LLPPADAVPARLHEAMRYAVLGGGKRVRAALVYAAGQA 63
Query: 115 CELVG---GDESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAIL 171
C + G E+ AA A+E+IH SL+HDDLP +D+D RR +P +H F E+TA+L
Sbjct: 64 CPVSGSVLAVEASLDRAAAAVELIHAYSLVHDDLPCMDDDVLRRGRPTTHVQFDEATAML 123
Query: 172 AGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKE 231
AGDAL LA E +A ++P +V+A + A G +G+ G+ +D+ S G +S E
Sbjct: 124 AGDALQPLAFELLASM--PIAPALIVQATQSLARAAGSQGMAGGQAIDLLSVGHRLSRDE 181
Query: 232 LEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEE 291
L+ +H KT +L +V G ++ G ++ + + YA+ +GL FQVVDDILDVT S
Sbjct: 182 LQQMHSMKTGAMLACSVALGGIVAGASSASRQALDIYAQAMGLAFQVVDDILDVTADSAS 241
Query: 292 LGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
LGKT GKD A K TY L+G++ A++FA EL
Sbjct: 242 LGKTPGKDAAENKPTYVSLLGLDEARAFASEL 273
>gi|302343358|ref|YP_003807887.1| polyprenyl synthetase [Desulfarculus baarsii DSM 2075]
gi|301639971|gb|ADK85293.1| Polyprenyl synthetase [Desulfarculus baarsii DSM 2075]
Length = 297
Score = 197 bits (500), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 121/294 (41%), Positives = 177/294 (60%), Gaps = 4/294 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAV-VLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDE 122
++Y+ ++ + V+ AL+ + + I KAMRYSL AGGKR+RP+LC+A E VGGD
Sbjct: 5 LKQYLAQRRQMVDAALEAWLPADESGGVILKAMRYSLFAGGKRLRPILCLAGAEAVGGDP 64
Query: 123 SWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE 182
AM ACALEMIHT SLIHDDLP +D+D+ RR P +H+VFG+ A+LAGD LL+ A+
Sbjct: 65 RRAMFCACALEMIHTYSLIHDDLPAMDDDDYRRGVPTNHKVFGQGMAVLAGDGLLTQAMV 124
Query: 183 HV--AVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKT 240
+ A + + +R +A + A G G+V G+ D+ +E + L ++YIH KT
Sbjct: 125 LLTDAAAVGDLPAERARQAANVVMRAAGHLGMVGGQAADLLAETMEPDLAMVDYIHARKT 184
Query: 241 AKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
L+ A++ G ++ G + + R+ Y R IGL FQ+ DD+LD+ +E LGK G D
Sbjct: 185 GALICASLEAGGILAGADRDRLSRLVRYGRRIGLAFQIADDLLDLEGDAETLGKATGADA 244
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
A GK TYP ++G A+ L+ +A+ +A A PL LA+YI SR +
Sbjct: 245 AKGKMTYPAVLGPAQARQTGQRLVEEAVAIIAEL-GPPARPLELLAHYIMSRTH 297
>gi|407368405|ref|ZP_11114937.1| farnesyl-diphosphate synthase [Pseudomonas mandelii JR-1]
Length = 300
Score = 197 bits (500), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 127/297 (42%), Positives = 184/297 (61%), Gaps = 10/297 (3%)
Query: 67 YMIRKAEQVNKALDEAVVLQPP--VKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW 124
Y +VN AL+ P ++++AMRYS++ GGKRVRPLL A+CE +GG
Sbjct: 5 YSATSQARVNAALETLFNAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGKAEQ 64
Query: 125 AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE-- 182
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AILAGD L SLA
Sbjct: 65 ANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAFSAL 124
Query: 183 ---HVAVNIAGVSPDRV-VRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
++ + A ++ D + ++ ++ + A G G+V G+ +D+ S G + K LE +H H
Sbjct: 125 LDPRLSTSDAALTSDHLRLQMVSALALAAGPAGMVGGQAIDLGSVGLKLDQKALETMHRH 184
Query: 239 KTAKLLEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
KT L+E +V GA+ G E++ ++ YA+ IGL FQV DDILDV +E LGK G
Sbjct: 185 KTGALIEVSVKLGALASGRAEKDELKSLQTYAQAIGLAFQVQDDILDVESDTETLGKRQG 244
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
D+A K TYP L+G++ AK++A EL QA+ L F+A+ A PL LA YI R++
Sbjct: 245 ADIARDKPTYPALLGLDAAKAYALELRDQALHALRPFDAA-AEPLRDLARYIVERRS 300
>gi|374619029|ref|ZP_09691563.1| geranylgeranyl pyrophosphate synthase [gamma proteobacterium
HIMB55]
gi|374302256|gb|EHQ56440.1| geranylgeranyl pyrophosphate synthase [gamma proteobacterium
HIMB55]
Length = 286
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 171/288 (59%), Gaps = 14/288 (4%)
Query: 78 ALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCI-----------ASCELVGGDESWAM 126
AL +V P + KA+ Y+L GK++R LC + +VG A
Sbjct: 2 ALSSHIVCSDP-GLKKALTYALENPGKQLRSRLCKETAAMVESASPSGASVVGNSIESAN 60
Query: 127 PAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAV 186
A+E +HT SLIHDDLP +DND+ RR KP H+ F E+TAIL GD L + A E V+
Sbjct: 61 RVGEAIECLHTYSLIHDDLPAMDNDDLRRGKPTVHKSFDEATAILVGDGLQAFAFEWVS- 119
Query: 187 NIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEA 246
G+S + ++ + + ++G +G+V G+ +DIA+EGK + + L+ +H+ KT L+EA
Sbjct: 120 ETEGLSDTQKIQLVKLLSKSVGFDGMVGGQAMDIAAEGKSLDVAALKEVHLRKTGALIEA 179
Query: 247 AVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKAT 306
+V+ GA+ G + + ++R IGL FQV+DD+LDVT SSE LGKTAGKD+A+ K+T
Sbjct: 180 SVLAGAICAGATQNQTAALHQFSRNIGLAFQVMDDVLDVTASSETLGKTAGKDIAAEKST 239
Query: 307 YPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
Y MG+++A+++A +LL +A+ L F A L L+ + R +
Sbjct: 240 YVACMGVDDARAYANQLLDEALALLTPF-GEAAESLSALSRLLVQRDS 286
>gi|395446915|ref|YP_006387168.1| IspA [Pseudomonas putida ND6]
gi|388560912|gb|AFK70053.1| IspA [Pseudomonas putida ND6]
Length = 295
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 118/267 (44%), Positives = 166/267 (62%), Gaps = 3/267 (1%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLD 149
+++ AMRYS++ GGKRVRPLL A+CE +G A AACA+E+IH SL+HDDLP +D
Sbjct: 30 RLYAAMRYSVMNGGKRVRPLLAYAACEALGAPAEQANGAACAVELIHAYSLVHDDLPAMD 89
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAE-MCSAMG 208
+D+ RR +P +H+ F E+ AILAGD L SLA + D + A+ + + A G
Sbjct: 90 DDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLDPCLSPQIDSIRLAMVQVLAKAAG 149
Query: 209 VEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGG-GNAIEVERVRN 267
G+V G+ +D+ S G+ + + LE++H HKT L+EA+V GA+ +++ ++
Sbjct: 150 PAGMVGGQAIDLGSVGQKLDQQALEFMHRHKTGALIEASVRLGALASARAEPAQLDALQT 209
Query: 268 YARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQA 327
YA+ IGL FQV DDILDV + LGK G D+A K TYP L+G+E AK++A EL QA
Sbjct: 210 YAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLEAAKAYAIELRDQA 269
Query: 328 IEELAYFEASKAAPLYFLANYIASRQN 354
+ L F A PL LA YI R+N
Sbjct: 270 LAALQGF-GETAEPLRALARYIVERRN 295
>gi|237747173|ref|ZP_04577653.1| geranyltranstransferase [Oxalobacter formigenes HOxBLS]
gi|229378524|gb|EEO28615.1| geranyltranstransferase [Oxalobacter formigenes HOxBLS]
Length = 299
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 119/274 (43%), Positives = 166/274 (60%), Gaps = 12/274 (4%)
Query: 86 QPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDL 145
Q P +H+AMRY++L GGKR+RPLL A+ L G + A A+EMIH SLIHDD+
Sbjct: 33 QFPEPLHQAMRYAVLDGGKRIRPLLVFATGALFGAPVAVMTQTASAVEMIHAYSLIHDDM 92
Query: 146 PFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAE--- 202
P +DND RR KP H FGE+ A+LAGDAL + A + ++ + D + +AE
Sbjct: 93 PCMDNDVLRRGKPTLHVQFGEAMALLAGDALQAQAF----IVLSKIDDD--AKLVAERLR 146
Query: 203 -MCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGG-NAI 260
+ A G G+ G+ +D+ S GK++S+ +LE +H KT LL+A+V+ GA +
Sbjct: 147 ILSEASGSLGMCGGQAIDLDSVGKNLSIDQLEQMHRLKTGALLKASVMLGAFSAKRPDPE 206
Query: 261 EVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFA 320
E+ + YA+ IGL FQVVDDILDVT + LGKTAGKD + K TY L+G+ENA+ A
Sbjct: 207 EITALDAYAKAIGLAFQVVDDILDVTADTAILGKTAGKDASDHKPTYVSLLGLENAEKLA 266
Query: 321 GELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+L QA E + F KA L+ LA+ + R+
Sbjct: 267 EKLRCQAHEAIEAF-GKKAVYLHELADLVVYRKK 299
>gi|261379616|ref|ZP_05984189.1| geranyltranstransferase [Neisseria subflava NJ9703]
gi|284798098|gb|EFC53445.1| geranyltranstransferase [Neisseria subflava NJ9703]
Length = 298
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 108/270 (40%), Positives = 164/270 (60%), Gaps = 3/270 (1%)
Query: 86 QPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDL 145
Q P +H+AMRY L GGKR+RPLL +A+ EL +++ A A+EM+H SL+HDD+
Sbjct: 31 QVPHTLHEAMRYVTLGGGKRLRPLLVLAASELGEANQNAVEQAMAAIEMVHVYSLVHDDM 90
Query: 146 PFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCS 205
P +DND RR KP H + E+TA+L GDAL + A + V G+ +R + ++ +
Sbjct: 91 PAMDNDSLRRGKPTCHVQYDEATALLVGDALQTQAFD-VLSRPTGLPAERQLAMLSTLAQ 149
Query: 206 AMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAV-IGGGNAIEVER 264
A G G+ G+ +D+A+ GK ++ ELE +H KT L+ AAV GA+ +++
Sbjct: 150 ASGSLGMAGGQAIDLANVGKAMNQAELEQMHSLKTGALIRAAVALGALSCPDLTPAQIQT 209
Query: 265 VRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELL 324
+ YA +GL FQV+DD+LD + LGKTAGKD + K TY KLMG++ A+++A L+
Sbjct: 210 LDRYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDSDNDKPTYVKLMGLQAARTYAETLI 269
Query: 325 GQAIEELAYFEASKAAPLYFLANYIASRQN 354
+A+ + F KA L LA ++ +R+N
Sbjct: 270 AEAVALIEPF-GDKALRLRQLAKFVTARKN 298
>gi|259909275|ref|YP_002649631.1| geranyltranstransferase [Erwinia pyrifoliae Ep1/96]
gi|387872236|ref|YP_005803617.1| geranyltranstransferase [Erwinia pyrifoliae DSM 12163]
gi|224964897|emb|CAX56420.1| Geranyltranstransferase [Erwinia pyrifoliae Ep1/96]
gi|283479330|emb|CAY75246.1| geranyltranstransferase [Erwinia pyrifoliae DSM 12163]
Length = 299
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 123/297 (41%), Positives = 173/297 (58%), Gaps = 10/297 (3%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVK---IHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
F + ++VN AL + + Q P + + AM Y L GGKR+RP L A+ +++
Sbjct: 3 FNLLLTSHYQRVNAAL-QGFISQLPFQSTPLVNAMEYGALLGGKRLRPFLVYATGDMLRA 61
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
+++ A A+E IH SLIHDDLP +DND RR +P H FGE AILAGDAL +LA
Sbjct: 62 NDAALDAPAAAIECIHAYSLIHDDLPAMDNDSLRRGQPTCHIKFGEEAAILAGDALQTLA 121
Query: 181 LEHVA-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHK 239
+A + GV + + ++E+ A GV G+ G+ +D+A+EGK V+L ELE IH HK
Sbjct: 122 FSILADAPMPGVVAESRIAMLSELAQASGVAGMCGGQALDLAAEGKQVTLNELEQIHRHK 181
Query: 240 TAKLLEAAVVCGAVIGG--GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAG 297
T L+ +AV GA+ G G A + + +A IGL FQV DDILDVT +E LGK G
Sbjct: 182 TGALIRSAVRLGALTAGERGRA-ALPALDRFANAIGLAFQVQDDILDVTGDTEVLGKQQG 240
Query: 298 KDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEAS--KAAPLYFLANYIASR 352
D GK+TYP LMG++NA+ A EL +++ L A + L LA+++ R
Sbjct: 241 ADQQLGKSTYPALMGLDNARIKAWELCQESLNALDTLAAQSYNTSALRALASFVIER 297
>gi|431800580|ref|YP_007227483.1| polyprenyl synthetase [Pseudomonas putida HB3267]
gi|430791345|gb|AGA71540.1| polyprenyl synthetase [Pseudomonas putida HB3267]
Length = 295
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 122/269 (45%), Positives = 169/269 (62%), Gaps = 7/269 (2%)
Query: 90 KIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFLD 149
+++ AMRYS++ GGKRVRPLL A+CE +G A AACA+E+IH SL+HDDLP +D
Sbjct: 30 RLYAAMRYSVMNGGKRVRPLLAYAACEALGAPAEHANGAACAVELIHAYSLVHDDLPAMD 89
Query: 150 NDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSP-DRVVR--AIAEMCSA 206
+D+ RR +P +H+ F E+ AILAGD L SLA A+ +SP D +R + + A
Sbjct: 90 DDDLRRGQPTTHKAFDEACAILAGDGLQSLAFS--ALLDPRLSPQDDSIRLAMVQALAKA 147
Query: 207 MGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGG-GNAIEVERV 265
G G+V G+ +D+ S G + + LE++H HKT L+EA+V GA+ +++ +
Sbjct: 148 AGPAGMVGGQAIDLGSVGLKLDQQALEFMHRHKTGALIEASVRLGALASARAEQAQLDAL 207
Query: 266 RNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLG 325
+ YA+ IGL FQV DDILDV + LGK G D+A K TYP L+G+E AK++A EL
Sbjct: 208 QTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLEAAKAYAIELRD 267
Query: 326 QAIEELAYFEASKAAPLYFLANYIASRQN 354
QA+ L F KA PL LA YI R+N
Sbjct: 268 QALVALQGF-GEKAEPLRALARYIVERRN 295
>gi|388466931|ref|ZP_10141141.1| geranyltranstransferase [Pseudomonas synxantha BG33R]
gi|388010511|gb|EIK71698.1| geranyltranstransferase [Pseudomonas synxantha BG33R]
Length = 295
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 127/292 (43%), Positives = 184/292 (63%), Gaps = 5/292 (1%)
Query: 67 YMIRKAEQVNKALDEAVVLQPP--VKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESW 124
Y +VN AL+ V P ++++AMRYS++ GGKRVRPLL A+CE +G +
Sbjct: 5 YQASSQARVNAALEPLFVAPSPELTRLYEAMRYSVMNGGKRVRPLLAYAACEALGAPAAE 64
Query: 125 AMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHV 184
A AACA+E+IH SL+HDDLP +D+D+ RR +P +H+ F E+ AIL+GD L SLA +
Sbjct: 65 ANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEAYAILSGDGLQSLAFSAL 124
Query: 185 A-VNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
++ V+ + +R + + A G G+V G+ +D+ S + + LEY+H HKT L
Sbjct: 125 LDPALSSVNAEIRLRMVTALAHAAGPAGMVGGQAIDMGSVSLKLDQEALEYMHRHKTGAL 184
Query: 244 LEAAVVCGAVIGG-GNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLAS 302
+EAAV GA+ G +A ++ ++ Y+R IGL FQV DDILDV + LGK G D+A
Sbjct: 185 IEAAVHLGALASGRADAEQLAALQTYSRAIGLAFQVQDDILDVESDTATLGKRQGADIAR 244
Query: 303 GKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
K TYP L+G+E AK++A EL QA++ L F+A+ A PL LA YI R++
Sbjct: 245 DKPTYPALLGLEAAKAYAIELRDQALDALRPFDAA-AEPLRDLARYIVERRH 295
>gi|114566119|ref|YP_753273.1| polyprenyl synthetase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114337054|gb|ABI67902.1| farnesyl-diphosphate synthase [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 301
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/296 (38%), Positives = 178/296 (60%), Gaps = 7/296 (2%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQP---PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG 120
F+E + ++ E V+ L +L P P IH+AM Y++ GGKR+RP++ + ++ GG
Sbjct: 8 FQEEIRQRKEFVDNCLI-GCLLSPDSDPPLIHQAMHYAIFNGGKRLRPIMVLEGAKIAGG 66
Query: 121 DESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLA 180
+ A+P ACALEMIH+ SL+HDDLP +D+D+ RR +P H VFGE+ A+L GDALL+ A
Sbjct: 67 EAEQAIPVACALEMIHSYSLVHDDLPCMDDDDFRRGQPTCHRVFGEANAVLTGDALLTAA 126
Query: 181 LEHVAV--NIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVH 238
E ++ +++G+ PD +R IAE+ A G G++ G+ +D+ +EGK + + L +H
Sbjct: 127 FELLSEKNSVSGIKPDTTLRVIAEIARASGSRGMIGGQILDLEAEGKIIDYESLRKLHCL 186
Query: 239 KTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGK 298
KT +L AA+ GA++GG + + +YA GL FQ+ DDILDV + GK+ G
Sbjct: 187 KTGQLFRAALRTGAIVGGIGEKGLLALSDYADNFGLAFQISDDILDVQGDAALTGKSMGS 246
Query: 299 DLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
D K TYP L+G+E ++ E + ++ L F +A L LA Y R++
Sbjct: 247 DARKEKNTYPSLLGLEKSRQLLEESIATCLQSLELF-GPEAEFLRQLACYTLYRKS 301
>gi|424742421|ref|ZP_18170743.1| polyprenyl synthetase [Acinetobacter baumannii WC-141]
gi|422944037|gb|EKU39042.1| polyprenyl synthetase [Acinetobacter baumannii WC-141]
Length = 303
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 116/274 (42%), Positives = 168/274 (61%), Gaps = 10/274 (3%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG-DESWAMPAACALEMIHTMSLIHDDLP 146
P + A+ ++++ GGKRVRP LC ++ L + + A AA A+E+IH SL HDDLP
Sbjct: 33 PEPLKSAVHHAVMLGGKRVRPALCYSTASLQPNPNFAAARRAAVAVELIHCYSLAHDDLP 92
Query: 147 FLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNI-----AGVSPDRVVRAIA 201
+DND RR +P H FGE TA+LAGD L S+A E ++ + G V++ I
Sbjct: 93 CMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLSSRLFDEQGQGTDAAIVLKQIQ 152
Query: 202 EMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAV-IGGGNAI 260
+ +A +V G+ +D+ +E K + +ELE IH +KT L++AA++ GAV I G
Sbjct: 153 ILATA--TSKMVCGQILDLQAEAKQIVQEELENIHRNKTGALIQAAIMMGAVTIFSGTDQ 210
Query: 261 EVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFA 320
+ ++R Y + IGL FQV+DDILD+T S+E LGKTAGKD K+TYP LMG+E A+ +A
Sbjct: 211 AIPKLRQYGQTIGLAFQVLDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQIYA 270
Query: 321 GELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
EL QA E LA+F A L ++ ++ +R N
Sbjct: 271 KELHDQAFEALAHF-GDNAKELVDISQFLLARTN 303
>gi|398832979|ref|ZP_10591125.1| geranylgeranyl pyrophosphate synthase [Herbaspirillum sp. YR522]
gi|398222366|gb|EJN08743.1| geranylgeranyl pyrophosphate synthase [Herbaspirillum sp. YR522]
Length = 306
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 122/272 (44%), Positives = 162/272 (59%), Gaps = 9/272 (3%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPF 147
P ++H+AMRY+ L GGKRVRPLL A+ EL + AA A+EMIH SL+HDD+P
Sbjct: 37 PTRLHQAMRYTALDGGKRVRPLLVHAAGELFDTPLALLERAAAAVEMIHVYSLVHDDMPC 96
Query: 148 LDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPD---RVVRAIAEMC 204
+D+D RR +P H + E+TA+L GDAL + A E ++ IA P R +R + +
Sbjct: 97 MDDDALRRGRPTVHVQYDEATALLVGDALQAQAFEVLSGAIAPDQPGLAARQLRMLNLLA 156
Query: 205 SAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAI---E 261
A G G+ G+ +D+AS G +SL ELE +H KT LL AAV+ GA+ GG A+ E
Sbjct: 157 QASGSVGMCGGQAIDLASVGMTLSLAELEQMHRRKTGALLRAAVMLGAL--GGKALGDAE 214
Query: 262 VERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAG 321
+ YA IGL FQVVDDILD T S LGKTAGKD A K TY ++G+ +++ A
Sbjct: 215 SAALDEYAGAIGLAFQVVDDILDATADSATLGKTAGKDAADNKPTYVSILGLAESQALAQ 274
Query: 322 ELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
L A + LA F KA L LA+ I R+
Sbjct: 275 RLRASAHQALAPF-GDKAQRLRELADLIVQRK 305
>gi|421697073|ref|ZP_16136649.1| polyprenyl synthetase [Acinetobacter baumannii WC-692]
gi|404560036|gb|EKA65286.1| polyprenyl synthetase [Acinetobacter baumannii WC-692]
Length = 303
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 118/274 (43%), Positives = 166/274 (60%), Gaps = 10/274 (3%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGG-DESWAMPAACALEMIHTMSLIHDDLP 146
P + A+ ++++ GGKRVRP LC A+ L + + A AA A+E+IH SL HDDLP
Sbjct: 33 PEPLKSAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLP 92
Query: 147 FLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNI-----AGVSPDRVVRAIA 201
+DND RR +P H FGE TA+LAGD L S+A E + + G V++ I
Sbjct: 93 CMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQ 152
Query: 202 EMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAV-IGGGNAI 260
+ +A +V G+ +D+ +E K +S ELE IH +KT L++AA++ GAV I G
Sbjct: 153 ILATASS--KMVCGQVLDLQAEAKQISQNELENIHRNKTGALIQAAIMMGAVTIFPGTDQ 210
Query: 261 EVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFA 320
+ ++R Y + IGL FQV DDILD+T S+E LGKTAGKD K+TYP LMG+E A+ +A
Sbjct: 211 AIPKLRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQIYA 270
Query: 321 GELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
EL QA E LA+F A L ++ ++ +R N
Sbjct: 271 KELHDQAFEALAHF-GENAKELVEISQFLLARTN 303
>gi|315917595|ref|ZP_07913835.1| dimethylallyltransferase [Fusobacterium gonidiaformans ATCC 25563]
gi|313691470|gb|EFS28305.1| dimethylallyltransferase [Fusobacterium gonidiaformans ATCC 25563]
Length = 290
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 100/257 (38%), Positives = 152/257 (59%), Gaps = 2/257 (0%)
Query: 73 EQVNKALDEAVV-LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACA 131
E NK E + PV + + M+Y+ L GGKR+RP L + L+G + P A A
Sbjct: 6 EYFNKRFGEVLTQYNTPVWMAEGMQYACLQGGKRIRPQLLFMTLSLLGKERDLGFPFAAA 65
Query: 132 LEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALE-HVAVNIAG 190
LEMIH+ SL+HDDLP +DND+ RR + +H+ FGE+ IL GDALL+ A + ++
Sbjct: 66 LEMIHSYSLVHDDLPAMDNDDYRRGQLTTHKKFGEANGILIGDALLTNAFSVMIRGSMGK 125
Query: 191 VSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVC 250
V+ ++++ +A G++G++ G+ +D+A GK +S K L +IH HKT +LL ++
Sbjct: 126 VAAEKILEIVALFSEYAGIDGMIGGQAMDVAYAGKQISYKTLTFIHEHKTGRLLLLPILV 185
Query: 251 GAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKL 310
++G + + E + +Y + IGL FQ+ DDILDV S EELGK D K+TYP +
Sbjct: 186 ACILGDASLEQREALESYGKKIGLAFQIKDDILDVEGSFEELGKALKSDEKLNKSTYPSI 245
Query: 311 MGIENAKSFAGELLGQA 327
G+E +K E L +A
Sbjct: 246 FGLEKSKELLTETLQEA 262
>gi|399018343|ref|ZP_10720523.1| geranylgeranyl pyrophosphate synthase [Herbaspirillum sp. CF444]
gi|398101588|gb|EJL91800.1| geranylgeranyl pyrophosphate synthase [Herbaspirillum sp. CF444]
Length = 307
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/267 (42%), Positives = 158/267 (59%), Gaps = 2/267 (0%)
Query: 88 PVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPF 147
P ++H+AMRY+ L GGKRVRPLL A+ EL E +A A+EMIH SL+HDD+P
Sbjct: 41 PARLHQAMRYTALDGGKRVRPLLVYAAGELFDAPEQLLARSAAAVEMIHVYSLVHDDMPC 100
Query: 148 LDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAM 207
+D+D RR KP H + E+TA+L GDAL + A ++ + R ++ + + A
Sbjct: 101 MDDDALRRGKPTVHVKYDEATALLVGDALQAQAFSVLSDIVDEAQAARQLKMVNLLAQAA 160
Query: 208 GVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGG-GNAIEVERVR 266
G G+ G+ +D+AS G +SL ELE +H KT LL A+++ GA G + E +
Sbjct: 161 GSAGMCGGQAIDLASVGMTLSLAELERMHRLKTGALLRASILLGAYSGKLLSTAEAAALE 220
Query: 267 NYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQ 326
YA IGL FQVVDDILD T S LGKTAGKD A K TY ++G+ +++ A +L
Sbjct: 221 VYAGAIGLAFQVVDDILDATADSATLGKTAGKDAADNKPTYVSILGLSESQALAEKLRED 280
Query: 327 AIEELAYFEASKAAPLYFLANYIASRQ 353
A + LA F KA L+ LA+ I R+
Sbjct: 281 AHQALAQF-GDKARRLHELADLIVQRK 306
>gi|384261858|ref|YP_005417044.1| Farnesyl-diphosphate synthase [Rhodospirillum photometricum DSM
122]
gi|378402958|emb|CCG08074.1| Farnesyl-diphosphate synthase [Rhodospirillum photometricum DSM
122]
Length = 319
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 116/301 (38%), Positives = 178/301 (59%), Gaps = 15/301 (4%)
Query: 64 FEEYMIRKAEQVNKALDEAVVL--QPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
++ M +A+ VN+ LD + P ++ AMRY+ L GGKR+RP L + S +L
Sbjct: 24 LKDTMAAEAKAVNEHLDSLMPTSGDPEDRVVAAMRYASLDGGKRLRPFLVLQSAQLFTVG 83
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
S A+ A A+EM+H SL+HDDLP +DND+ RR +P +H + E+TAILAGDALL+ A
Sbjct: 84 RSCALNVAAAIEMVHCYSLVHDDLPAMDNDDLRRGRPTTHRAYDEATAILAGDALLTKAF 143
Query: 182 EHVAVNIAGVSPDRVVRA--IAEMCSAMGVEGLVAGEFVDIASEG------KDVSLKELE 233
E +A + G D VRA + E+ A G G+V G+ +D+ +E +DV+ +
Sbjct: 144 EVLA--LTGTHADPQVRADLVLELALASGARGMVGGQMIDLMAERGLLNGVQDVA--AIT 199
Query: 234 YIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELG 293
+H KT +L+ + V GA++G + + YA +GL FQ+ DD+LDV ++ LG
Sbjct: 200 RMHTMKTGRLISFSCVAGAILGKAPRPLRQALAAYAHDLGLAFQIADDLLDVEGDTQTLG 259
Query: 294 KTAGKDLASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQ 353
KTAGKD A+GK+T+ L+G++ A+ A L QA+ L F+ KA L +A ++ R+
Sbjct: 260 KTAGKDQAAGKSTFVSLLGLDRARDQAQALARQAVGHLDVFD-EKADLLRDVARFVVERE 318
Query: 354 N 354
+
Sbjct: 319 S 319
>gi|255065407|ref|ZP_05317262.1| geranyltranstransferase [Neisseria sicca ATCC 29256]
gi|255050232|gb|EET45696.1| geranyltranstransferase [Neisseria sicca ATCC 29256]
Length = 298
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 113/270 (41%), Positives = 166/270 (61%), Gaps = 3/270 (1%)
Query: 86 QPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDL 145
Q P +H+AMRY L GGKR+RPLL +A+ EL D++ A A+EM+H SL+HDD+
Sbjct: 31 QVPHTLHEAMRYVTLGGGKRLRPLLVLAASELGDADQNAVEQAMAAIEMVHVYSLVHDDM 90
Query: 146 PFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCS 205
P +DND RR KP H + E+TA+L GDAL + A + V G+ +R + ++ +
Sbjct: 91 PAMDNDSLRRGKPTCHVKYDEATALLVGDALQTQAFD-VLSRPTGLPAERQIAMLSTLAK 149
Query: 206 AMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGG-NAIEVER 264
A G G+ G+ +D+A+ GK ++ +LE +H KT L+ AAVV GA+ ++ +V
Sbjct: 150 ASGSLGMAGGQAIDLANVGKAMNQAQLEQMHSLKTGTLIRAAVVLGALACPDLDSNDVRT 209
Query: 265 VRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELL 324
+ NYA +GL FQV+DD+LD + LGKTAGKD + K TY KLMG++ A+++A L
Sbjct: 210 LDNYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDSDNDKPTYVKLMGLQAARAYAETLT 269
Query: 325 GQAIEELAYFEASKAAPLYFLANYIASRQN 354
+A L F A KA L LA ++ +R+N
Sbjct: 270 AEAAALLEPFGA-KALHLRLLAEFVTARKN 298
>gi|90408168|ref|ZP_01216336.1| geranyltranstransferase [Psychromonas sp. CNPT3]
gi|90310698|gb|EAS38815.1| geranyltranstransferase [Psychromonas sp. CNPT3]
Length = 296
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/294 (40%), Positives = 168/294 (57%), Gaps = 8/294 (2%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPV--KIHKAMRYSLLAGGKRVRPLLCIASCELVGGD 121
+Y R +Q+ K +D LQ P+ ++KAM + L GGKR+RP L +++G
Sbjct: 8 LSQYQSRTDQQLTKYID----LQSPLCLSLNKAMYHGALLGGKRIRPFLVYVVGDMLGSQ 63
Query: 122 ESWAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLAL 181
S P ACALE +H SLIHDDLP +D+D RR + H VFGE+ AILAGDAL SLA
Sbjct: 64 LSTLDPIACALECMHAYSLIHDDLPAMDDDALRRGQATCHIVFGEAQAILAGDALQSLAF 123
Query: 182 EHVAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTA 241
+ ++ +S ++ + + A G +G+ AG+ +D+A+E K V L LE IH KT
Sbjct: 124 DILSQENKELSCSAQLKMLNVLAKASGDKGMCAGQALDLAAENKRVDLTMLESIHRAKTG 183
Query: 242 KLLEAAVVCGAVIGGG-NAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 300
L++AAV + G ++ + + YAR IGL FQV DDILD+T S+ LGK G D+
Sbjct: 184 ALIQAAVELATLTKVGLDSQHKQYLLTYARAIGLAFQVQDDILDITSDSQTLGKPQGSDI 243
Query: 301 ASGKATYPKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ K+TYP L+G+E A+ L +AI+ L F A YI SR+N
Sbjct: 244 NANKSTYPALLGLEQAQHKMQLLYEEAIDALNKLPYDTHILAQF-ALYIISRKN 296
>gi|90415578|ref|ZP_01223512.1| geranyltranstransferase [gamma proteobacterium HTCC2207]
gi|90332901|gb|EAS48071.1| geranyltranstransferase [marine gamma proteobacterium HTCC2207]
Length = 295
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 117/269 (43%), Positives = 169/269 (62%), Gaps = 3/269 (1%)
Query: 87 PPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLP 146
P + AMRYS+ GGKR+RP LC A+ + V G ++ A ALEMIH SLIHDDLP
Sbjct: 29 PAEPLFAAMRYSVFNGGKRLRPALCFAAADAVAGSDANTAKVAAALEMIHAYSLIHDDLP 88
Query: 147 FLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSA 206
+D+D+ RR KP H F E+TAILAGD L SLA + + ++ + P VV ++ +
Sbjct: 89 AMDDDDLRRGKPTCHIQFDEATAILAGDGLQSLAFQQL-CELSELDPTIVVELVSTLSRL 147
Query: 207 MGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIE-VERV 265
G G+VAG+ +D+A+ G + L L+ +H HKT L+EA+V+ GA+ G + E + +
Sbjct: 148 GGCSGMVAGQAIDLAATGSVLELDALKVMHAHKTGALIEASVLMGALATGQASQEQLGAL 207
Query: 266 RNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLG 325
+++AR IGL FQ+ DDILDV S+E+LGK G D + K+TY ++G+E A+S A +L
Sbjct: 208 KDFARAIGLAFQIQDDILDVESSTEQLGKQQGSDATNLKSTYTSILGLERARSEAAKLFD 267
Query: 326 QAIEELAYFEASKAAPLYFLANYIASRQN 354
Q++E L F KA PL +A +I R +
Sbjct: 268 QSMEILENF-GEKADPLRAIAAFIVKRNH 295
>gi|376261504|ref|YP_005148224.1| geranylgeranyl pyrophosphate synthase [Clostridium sp. BNL1100]
gi|373945498|gb|AEY66419.1| geranylgeranyl pyrophosphate synthase [Clostridium sp. BNL1100]
Length = 294
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 105/246 (42%), Positives = 150/246 (60%)
Query: 89 VKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDDLPFL 148
++I +AM YSLLAGGKR+RPLL +A E++ + + CA+EMIHT SLIHDDLP +
Sbjct: 30 LEIKEAMSYSLLAGGKRLRPLLALAVAEMLDKPLNEVINFGCAIEMIHTYSLIHDDLPAM 89
Query: 149 DNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIAGVSPDRVVRAIAEMCSAMG 208
DND+ RR KP +H+VFGE+ AILAGD LL++A E + + + +RA + A G
Sbjct: 90 DNDDYRRGKPTNHKVFGEAMAILAGDGLLNMAYEIMINDTVESNSIEKMRAAGIVAKAAG 149
Query: 209 VEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVERVRNY 268
G+V G+ +D+ SEGK + L+ +H KT L++A V AVI G + E E + Y
Sbjct: 150 ALGMVGGQVIDLQSEGKTIESDRLKTMHRLKTGALIKAPVEAAAVICGADKKEFELLSGY 209
Query: 269 ARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGELLGQAI 328
A +GL FQ+ DDILD+ + E +GK G D + K+TY + G+E +K + + I
Sbjct: 210 AANLGLAFQIKDDILDIEGTVENMGKNPGNDSSCNKSTYVTMYGLEESKKLLETVTQEGI 269
Query: 329 EELAYF 334
L F
Sbjct: 270 SCLEAF 275
>gi|386719412|ref|YP_006185738.1| octaprenyl-diphosphate synthase [Stenotrophomonas maltophilia D457]
gi|384078974|emb|CCH13569.1| Octaprenyl-diphosphate synthase [Stenotrophomonas maltophilia D457]
Length = 292
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/260 (43%), Positives = 157/260 (60%), Gaps = 4/260 (1%)
Query: 64 FEEYMIRKAEQVNKALDEAVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDES 123
F + R Q++ AL + P ++H+AMRYS+L GGKR+RPLL AS L G
Sbjct: 7 FARWRDRIESQLDAALPSPA--EAPQRLHQAMRYSVLGGGKRMRPLLVYASGHLFGAQPE 64
Query: 124 WAMPAACALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEH 183
AA A+E+IH SL+HDDLP +D+D RR KP +H F E+TAILAGDAL + A
Sbjct: 65 QLDAAAMAVELIHAYSLVHDDLPAMDDDALRRGKPTTHIAFDEATAILAGDALQTRAFGL 124
Query: 184 VAVNIAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKL 243
+A A + V + + A G G+ G+ +DI + G+ +L L +H KT L
Sbjct: 125 LA--DAPLPATLRVACLQTLAHASGASGMCGGQALDIDATGQQQTLAALTRMHALKTGAL 182
Query: 244 LEAAVVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASG 303
+ AAV GA+ G + ++ ++ ++A +GL FQV DDILDV SSE+LGKTAGKD A
Sbjct: 183 IRAAVRMGALCGQAHEPQLAQLDSFADALGLAFQVRDDILDVEASSEQLGKTAGKDEAQD 242
Query: 304 KATYPKLMGIENAKSFAGEL 323
K+T+P L+G++ AK+ EL
Sbjct: 243 KSTFPALLGMDGAKAQLREL 262
>gi|385265427|ref|ZP_10043514.1| Polyprenyl synthetase [Bacillus sp. 5B6]
gi|394992172|ref|ZP_10384964.1| YqiD [Bacillus sp. 916]
gi|429505839|ref|YP_007187023.1| hypothetical protein B938_11695 [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|452856198|ref|YP_007497881.1| geranyltranstransferase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
gi|385149923|gb|EIF13860.1| Polyprenyl synthetase [Bacillus sp. 5B6]
gi|393807001|gb|EJD68328.1| YqiD [Bacillus sp. 916]
gi|429487429|gb|AFZ91353.1| hypothetical protein B938_11695 [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|452080458|emb|CCP22221.1| geranyltranstransferase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
Length = 296
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/271 (42%), Positives = 173/271 (63%), Gaps = 2/271 (0%)
Query: 85 LQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAACALEMIHTMSLIHDD 144
L P + K+M YSL AGGKR+RPL+ +A G DE +P CA+EMIHT SLIHDD
Sbjct: 27 LAMPETLKKSMLYSLEAGGKRLRPLVVLAVLNAYGKDEKDGIPVGCAVEMIHTYSLIHDD 86
Query: 145 LPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVNIA-GVSPDRVVRAIAEM 203
LP +D+D+ RR KP +H+VFGE+ A+LAGD LL+ + + + +++ VS ++ +R + E+
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAAAVLAGDGLLTESFKLITSHVSEAVSAEKRLRLVDEL 146
Query: 204 CSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAAVVCGAVIGGGNAIEVE 263
SA G EG+V G+ D+ +E K ++L+ELE IH KTAKLL +V GA++ EVE
Sbjct: 147 ISAAGTEGMVGGQAADMEAEQKRITLEELESIHERKTAKLLGFSVTAGAILADAPEDEVE 206
Query: 264 RVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATYPKLMGIENAKSFAGEL 323
++R ++ IG+ FQ+ DDILD+ E +GK G D ++ K+TYP L+ +E AK
Sbjct: 207 KLRLFSSHIGIGFQIRDDILDIEGHEERIGKPVGSDTSNEKSTYPSLLTLEGAKEKLAYH 266
Query: 324 LGQAIEELAYFEASKAAPLYFLANYIASRQN 354
+ +A + ++ K L+ L + IA+R +
Sbjct: 267 ISEAKQIISGLSLQKEL-LHDLCDLIAARDH 296
>gi|317132180|ref|YP_004091494.1| polyprenyl synthetase [Ethanoligenens harbinense YUAN-3]
gi|315470159|gb|ADU26763.1| Polyprenyl synthetase [Ethanoligenens harbinense YUAN-3]
Length = 296
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 123/281 (43%), Positives = 180/281 (64%), Gaps = 8/281 (2%)
Query: 72 AEQVNKALDE--AVVLQPPVKIHKAMRYSLLAGGKRVRPLLCIASCELVGGDESWAMPAA 129
A++VN+AL+ P ++ +AMRYS +AGGKRVRP+L + C + GG E A+P A
Sbjct: 11 AKRVNEALNRFLPTAEGPQKRLFEAMRYSAMAGGKRVRPMLVLEFCRMCGGKEEQALPFA 70
Query: 130 CALEMIHTMSLIHDDLPFLDNDERRRSKPASHEVFGESTAILAGDALLSLALEHVAVN-- 187
CA+EMIHT SLIHDDLP +D+D+ RR +P+ H + E+TA+LAGDALLSLA E N
Sbjct: 71 CAVEMIHTYSLIHDDLPCMDDDDFRRGRPSCHVQYDEATALLAGDALLSLAFETGLCNNM 130
Query: 188 IAGVSPDRVVRAIAEMCSAMGVEGLVAGEFVDIASEGKDVSLKELEYIHVHKTAKLLEAA 247
+GV +RA+ + A G +G+V G+ +D+ SEG+ + L+ LE +H KT ++ AA
Sbjct: 131 QSGVLAQNALRAMGLLAKASGGQGMVGGQMIDLLSEGQHIPLELLETMHRGKTGAMIRAA 190
Query: 248 VVCGAVIGGGNAIEVERVRNYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASGKATY 307
G ++ G + V+ YA +GL FQ+VDDILDVT +S+ LGK AG D+ + K+TY
Sbjct: 191 AAGGCILAGADETRVQAADAYAAKLGLAFQIVDDILDVTGNSQTLGKPAGSDVGNRKSTY 250
Query: 308 PKLMGIENAKSFAGELLGQAIEELAYFEASKAAPLYFLANY 348
+G+E A+ AG L +A++ L F +A FL+++
Sbjct: 251 VTHLGLEEARRLAGRLSQEAVDCLRVFGEERA----FLSDF 287
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.134 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,305,583,933
Number of Sequences: 23463169
Number of extensions: 215782959
Number of successful extensions: 570108
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8306
Number of HSP's successfully gapped in prelim test: 1282
Number of HSP's that attempted gapping in prelim test: 543331
Number of HSP's gapped (non-prelim): 10098
length of query: 354
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 211
effective length of database: 9,003,962,200
effective search space: 1899836024200
effective search space used: 1899836024200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 77 (34.3 bits)