Your job contains 1 sequence.
>037717
MNPFDAWEKQQREKCTFEIEDKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEE
RKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYEPRWVAAMSVAARVSQEM
GVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLST
DNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFYTKAPEV
DYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYA
NLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESL
LVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIWMTILCQKYNELIWKMLSLFSNV
LVNFDFIDPPLEEALLKAFELLYALGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKY
KCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNY
STEWCRENYIQVSSMKRARDIRDQLEGLFARVEIDTSIYSNL
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 037717
(582 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2033723 - symbol:ESP3 "ENHANCED SILENCING PHEN... 1957 3.1e-202 1
TAIR|locus:2062492 - symbol:MEE29 "maternal effect embryo... 1918 4.2e-198 1
ZFIN|ZDB-GENE-030131-8589 - symbol:dhx16 "DEAH (Asp-Glu-A... 1690 3.6e-176 2
UNIPROTKB|O60231 - symbol:DHX16 "Putative pre-mRNA-splici... 1653 9.6e-174 2
RGD|1302963 - symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box po... 1653 9.6e-174 2
UNIPROTKB|E1BF68 - symbol:DHX16 "Uncharacterized protein"... 1651 1.6e-173 2
UNIPROTKB|F1RU83 - symbol:DHX16 "Putative pre-mRNA-splici... 1649 2.5e-173 2
UNIPROTKB|Q767K6 - symbol:DHX16 "Putative pre-mRNA-splici... 1649 2.5e-173 2
FB|FBgn0086444 - symbol:l(2)37Cb "lethal (2) 37Cb" specie... 1684 2.6e-173 1
UNIPROTKB|F1PGL2 - symbol:DHX16 "Uncharacterized protein"... 1642 1.4e-172 2
DICTYBASE|DDB_G0285937 - symbol:dhx16 "putative RNA splic... 1664 3.4e-171 1
WB|WBGene00003392 - symbol:mog-4 species:6239 "Caenorhabd... 1596 6.4e-166 2
UNIPROTKB|O45244 - symbol:mog-4 "Probable pre-mRNA-splici... 1596 6.4e-166 2
ASPGD|ASPL0000006947 - symbol:AN5827 species:162425 "Emer... 1538 7.7e-158 1
POMBASE|SPBC19C2.01 - symbol:cdc28 "ATP-dependent RNA hel... 1517 2.3e-157 2
UNIPROTKB|G4N1N4 - symbol:MGG_07501 "ATP-dependent RNA he... 1525 1.8e-156 1
DICTYBASE|DDB_G0291183 - symbol:dhx8 "putative RNA splici... 1431 1.7e-146 1
UNIPROTKB|F5H658 - symbol:DHX8 "ATP-dependent RNA helicas... 1418 4.0e-145 1
UNIPROTKB|Q14562 - symbol:DHX8 "ATP-dependent RNA helicas... 1418 4.0e-145 1
MGI|MGI:1306823 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box... 1418 4.0e-145 1
RGD|1310723 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box pol... 1418 4.0e-145 1
UNIPROTKB|D4A805 - symbol:Dhx8 "Protein Dhx8" species:101... 1418 4.0e-145 1
UNIPROTKB|F1MEM4 - symbol:DHX8 "Uncharacterized protein" ... 1417 5.1e-145 1
UNIPROTKB|E2R9R9 - symbol:DHX8 "Uncharacterized protein" ... 1417 5.1e-145 1
UNIPROTKB|F1S1H3 - symbol:DHX8 "Uncharacterized protein" ... 1417 5.1e-145 1
ZFIN|ZDB-GENE-050809-39 - symbol:dhx8 "DEAH (Asp-Glu-Ala-... 1415 8.4e-145 1
UNIPROTKB|F1P306 - symbol:LOC100858239 "Uncharacterized p... 1412 1.7e-144 1
UNIPROTKB|G4NFJ0 - symbol:MGG_08807 "Pre-mRNA-splicing fa... 1410 2.8e-144 1
FB|FBgn0086895 - symbol:pea "peanuts" species:7227 "Droso... 1407 5.9e-144 1
TAIR|locus:2088847 - symbol:AT3G26560 species:3702 "Arabi... 1403 1.6e-143 1
CGD|CAL0004768 - symbol:PRP22 species:5476 "Candida albic... 1270 1.6e-143 2
ASPGD|ASPL0000070923 - symbol:AN4721 species:162425 "Emer... 1400 3.3e-143 1
WB|WBGene00003393 - symbol:mog-5 species:6239 "Caenorhabd... 1384 1.6e-141 1
UNIPROTKB|Q09530 - symbol:mog-5 "Probable pre-mRNA-splici... 1384 1.6e-141 1
GENEDB_PFALCIPARUM|PF10_0294 - symbol:PF10_0294 "RNA heli... 1320 7.4e-137 2
UNIPROTKB|Q8IJA4 - symbol:PF10_0294 "RNA helicase, putati... 1320 7.4e-137 2
SGD|S000000815 - symbol:PRP22 "DEAH-box RNA-dependent ATP... 1330 8.5e-136 1
POMBASE|SPAC10F6.02c - symbol:prp22 "ATP-dependent RNA he... 1327 1.8e-135 1
TAIR|locus:2095989 - symbol:AT3G62310 species:3702 "Arabi... 1200 1.2e-132 2
TAIR|locus:2065210 - symbol:AT2G47250 species:3702 "Arabi... 1196 4.8e-131 2
UNIPROTKB|Q5JP46 - symbol:DHX16 "Putative pre-mRNA-splici... 1252 1.6e-127 1
UNIPROTKB|Q5SQH5 - symbol:DHX16 "Putative pre-mRNA-splici... 1252 1.6e-127 1
DICTYBASE|DDB_G0285843 - symbol:helD "putative RNA splici... 1245 8.7e-127 1
POMBASE|SPBC1711.17 - symbol:prp16 "ATP-dependent RNA hel... 1240 2.9e-126 1
CGD|CAL0002409 - symbol:orf19.5865 species:5476 "Candida ... 1231 2.6e-125 1
FB|FBgn0033160 - symbol:CG11107 species:7227 "Drosophila ... 1231 2.6e-125 1
UNIPROTKB|Q17R09 - symbol:DHX38 "Pre-mRNA-splicing factor... 1228 5.5e-125 1
UNIPROTKB|F1S3A8 - symbol:DHX38 "Uncharacterized protein"... 1227 7.0e-125 1
UNIPROTKB|Q92620 - symbol:DHX38 "Pre-mRNA-splicing factor... 1225 1.1e-124 1
WB|WBGene00003389 - symbol:mog-1 species:6239 "Caenorhabd... 1225 1.1e-124 1
UNIPROTKB|P34498 - symbol:mog-1 "Probable pre-mRNA-splici... 1225 1.1e-124 1
UNIPROTKB|E2RC56 - symbol:DHX38 "Uncharacterized protein"... 1224 1.5e-124 1
RGD|1310345 - symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box po... 1224 1.5e-124 1
ZFIN|ZDB-GENE-040426-1144 - symbol:dhx38 "DEAH (Asp-Glu-A... 1223 1.9e-124 1
UNIPROTKB|G4MTU4 - symbol:MGG_11351 "Pre-mRNA-splicing fa... 1216 1.0e-123 1
ASPGD|ASPL0000014477 - symbol:AN4032 species:162425 "Emer... 1208 7.2e-123 1
DICTYBASE|DDB_G0285213 - symbol:dhx15 "putative RNA splic... 1206 1.2e-122 1
FB|FBgn0026713 - symbol:l(1)G0007 "lethal (1) G0007" spec... 1206 1.2e-122 1
UNIPROTKB|F1NHI3 - symbol:DHX15 "Uncharacterized protein"... 1195 1.7e-121 1
UNIPROTKB|A5D7D9 - symbol:DHX15 "Uncharacterized protein"... 1195 1.7e-121 1
UNIPROTKB|E2R2U3 - symbol:DHX15 "Uncharacterized protein"... 1195 1.7e-121 1
UNIPROTKB|O43143 - symbol:DHX15 "Putative pre-mRNA-splici... 1195 1.7e-121 1
UNIPROTKB|F1S5A8 - symbol:DHX15 "Uncharacterized protein"... 1195 1.7e-121 1
MGI|MGI:1099786 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) bo... 1195 1.7e-121 1
RGD|1308072 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box po... 1195 1.7e-121 1
ZFIN|ZDB-GENE-030131-650 - symbol:dhx15 "DEAH (Asp-Glu-Al... 1191 4.6e-121 1
SGD|S000003088 - symbol:PRP43 "RNA helicase in the DEAH-b... 1169 9.8e-119 1
POMBASE|SPBC16H5.10c - symbol:prp43 "ATP-dependent RNA he... 1156 2.3e-117 1
GENEDB_PFALCIPARUM|PFL1525c - symbol:PFL1525c "pre-mRNA s... 683 5.6e-117 2
UNIPROTKB|Q8I5A4 - symbol:PFL1525c "Pre-mRNA splicing fac... 683 5.6e-117 2
UNIPROTKB|F1MVJ1 - symbol:DHX38 "Pre-mRNA-splicing factor... 1145 3.4e-116 1
CGD|CAL0000153 - symbol:orf19.1687 species:5476 "Candida ... 1130 1.3e-114 1
ASPGD|ASPL0000059403 - symbol:AN0133 species:162425 "Emer... 1123 7.3e-114 1
SGD|S000005294 - symbol:PRP2 "RNA-dependent ATPase in the... 1104 7.6e-112 1
WB|WBGene00018967 - symbol:F56D2.6 species:6239 "Caenorha... 1089 2.9e-110 1
UNIPROTKB|Q20875 - symbol:F56D2.6 "Putative pre-mRNA-spli... 1089 2.9e-110 1
CGD|CAL0005059 - symbol:orf19.2818 species:5476 "Candida ... 965 1.3e-109 2
UNIPROTKB|F1NY80 - symbol:F1NY80 "Uncharacterized protein... 845 7.1e-109 2
UNIPROTKB|E1C094 - symbol:E1C094 "Uncharacterized protein... 845 1.9e-108 2
UNIPROTKB|G4NHA6 - symbol:MGG_03893 "Pre-mRNA-splicing fa... 1060 3.5e-107 1
POMBASE|SPAC2G11.11c - symbol:prh1 "ATP-dependent RNA hel... 1059 4.4e-107 1
TAIR|locus:2010549 - symbol:AT1G27900 species:3702 "Arabi... 1058 5.7e-107 1
GENEDB_PFALCIPARUM|MAL13P1.322 - symbol:MAL13P1.322 "spli... 561 3.3e-104 2
UNIPROTKB|C0H5K5 - symbol:MAL13P1.322 "Splicing factor, p... 561 3.3e-104 2
DICTYBASE|DDB_G0270110 - symbol:dhx33 "DEAD/DEAH box heli... 1017 1.3e-102 1
TAIR|locus:2197965 - symbol:AT1G26370 species:3702 "Arabi... 681 7.5e-101 2
ZFIN|ZDB-GENE-070410-11 - symbol:zgc:158828 "zgc:158828" ... 963 6.6e-97 1
UNIPROTKB|E1BYA5 - symbol:DHX33 "Uncharacterized protein"... 963 6.6e-97 1
UNIPROTKB|E1BDN4 - symbol:DHX35 "Uncharacterized protein"... 959 1.8e-96 1
UNIPROTKB|F5GXM6 - symbol:DHX35 "Probable ATP-dependent R... 959 1.8e-96 1
RGD|1311165 - symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box po... 958 2.2e-96 1
UNIPROTKB|D3ZZG1 - symbol:Dhx35 "Protein Dhx35" species:1... 958 2.2e-96 1
UNIPROTKB|G4MKC3 - symbol:MGG_02518 "ATP-dependent RNA he... 955 4.7e-96 1
SGD|S000001794 - symbol:PRP16 "DEAH-box RNA helicase invo... 955 4.7e-96 1
UNIPROTKB|F1SDW0 - symbol:DHX35 "Uncharacterized protein"... 954 5.9e-96 1
UNIPROTKB|E2RQN1 - symbol:DHX35 "Uncharacterized protein"... 952 9.7e-96 1
UNIPROTKB|E2RQN7 - symbol:DHX35 "Uncharacterized protein"... 952 9.7e-96 1
UNIPROTKB|Q5THR1 - symbol:DHX35 "Probable ATP-dependent R... 950 1.6e-95 1
UNIPROTKB|Q9H5Z1 - symbol:DHX35 "Probable ATP-dependent R... 950 1.6e-95 1
ASPGD|ASPL0000052850 - symbol:AN1363 species:162425 "Emer... 946 4.2e-95 1
WARNING: Descriptions of 214 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2033723 [details] [associations]
symbol:ESP3 "ENHANCED SILENCING PHENOTYPE 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0008380 "RNA splicing" evidence=NAS]
[GO:0035194 "posttranscriptional gene silencing by RNA"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008380 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 GO:GO:0035194 OMA:GTLHREF EMBL:AY074318 EMBL:AY133872
IPI:IPI00543041 RefSeq:NP_174527.2 UniGene:At.40132
ProteinModelPortal:Q8VY00 IntAct:Q8VY00 PaxDb:Q8VY00 PRIDE:Q8VY00
EnsemblPlants:AT1G32490.1 GeneID:840143 KEGG:ath:AT1G32490
TAIR:At1g32490 InParanoid:Q8VY00 PhylomeDB:Q8VY00
ProtClustDB:CLSN2685836 ArrayExpress:Q8VY00 Genevestigator:Q8VY00
Uniprot:Q8VY00
Length = 1044
Score = 1957 (694.0 bits), Expect = 3.1e-202, P = 3.1e-202
Identities = 402/599 (67%), Positives = 467/599 (77%)
Query: 4 FDAWEKQQREKCTFEIEDKIVDFFSESVFDGDNF-DEFESELPNKSVVKST-LEMLQEER 61
F A KQ + F ED+I +F ESV G+N+ D +++ ++ + + T LE LQE R
Sbjct: 343 FGAKNKQASDDYQFVFEDQI-NFIKESVMAGENYEDAMDAKQKSQDLAEKTALEELQEVR 401
Query: 62 KTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE-------------PRWVA 108
++LPIY + ++LL+AV + VL IVG+TGSGKTTQIPQYL+E PR VA
Sbjct: 402 RSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVA 461
Query: 109 AMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVL 168
AMSVAARV+QEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTD MLLRE++ EP L SYSV+
Sbjct: 462 AMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRELLGEPDLASYSVV 521
Query: 169 IVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRY 228
IVDEA ERTLSTD LFGL+KD+ +RPDLKLLISSAT+DAEKFSDYF +APIF PGRRY
Sbjct: 522 IVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYFDTAPIFSFPGRRY 581
Query: 229 PVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGT 288
PVE+ YT APE DY++AAIVT L IHV EP GDILVF TGQ+EIE AEEILK R RGLGT
Sbjct: 582 PVEINYTSAPEADYMDAAIVTILTIHVREPLGDILVFFTGQEEIETAEEILKHRIRGLGT 641
Query: 289 KIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKV 348
KI ELIICPIYANLP+ELQAKIFEPTPE ARKVVLATNIAETSLTIDGIKYV+ PGF+K+
Sbjct: 642 KIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKM 701
Query: 349 KSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIWM--TIL-CQK 405
KSYNP+TGMESLL+ PISKASA QR G + RT PGKC+RLYT NY+ T+ Q+
Sbjct: 702 KSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVPEVQR 761
Query: 406 YN--ELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAE 463
N ++ + SL + L+NFDF+DPP GALNK G+LT+ GR+MAE
Sbjct: 762 TNLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLELLFALGALNKLGELTKAGRRMAE 821
Query: 464 FPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVG 523
FP+DP LSK IV DKYKCSDEII+IAAML +G SIFYRPKDKQ++ADNARMNFH G+VG
Sbjct: 822 FPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNARMNFHTGNVG 881
Query: 524 DRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVEIDTSIYSNL 582
D IALL+VY+ W+E N+ST+WC ENYIQV SMKRARDIRDQLEGL RVEID S SNL
Sbjct: 882 DHIALLKVYSSWKETNFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDIS--SNL 938
>TAIR|locus:2062492 [details] [associations]
symbol:MEE29 "maternal effect embryo arrest 29"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 GO:GO:0009793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:RIDDHRD IPI:IPI00520097
RefSeq:NP_181077.3 UniGene:At.53041 ProteinModelPortal:F4IJV4
SMR:F4IJV4 PRIDE:F4IJV4 EnsemblPlants:AT2G35340.1 GeneID:818101
KEGG:ath:AT2G35340 Uniprot:F4IJV4
Length = 1044
Score = 1918 (680.2 bits), Expect = 4.2e-198, P = 4.2e-198
Identities = 391/597 (65%), Positives = 454/597 (76%)
Query: 4 FDAWEKQQREKCTFEIEDKIVDFFSESVFDGDNF-DEFESELPNKSVVKSTLEMLQEERK 62
F A K+ + F ED+I DF SV GDN+ DE ++ S KS MLQE+RK
Sbjct: 344 FGAKNKEVSDNYEFVFEDQI-DFIKASVLAGDNYEDEMHAKPSQDSAGKSAFHMLQEDRK 402
Query: 63 TLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE-------------PRWVAA 109
LPIY + ++LL AV + VL IVGETGSGKTTQIPQYL+E PR VAA
Sbjct: 403 ALPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGYTKLGKVGCTQPRRVAA 462
Query: 110 MSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLI 169
MSVAARV+QEMG KLGHEVGYSIRFEDCTS+KT+LKYMTD MLLRE++ EP L SYSV+I
Sbjct: 463 MSVAARVAQEMGGKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLRELLGEPDLGSYSVII 522
Query: 170 VDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYP 229
VDEA ERTL TD LFGL+KD+ RPDLKLLISSAT+DAEKFSD+F APIF+ PGRRYP
Sbjct: 523 VDEAHERTLRTDILFGLVKDIARARPDLKLLISSATMDAEKFSDFFDQAPIFRFPGRRYP 582
Query: 230 VELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTK 289
V++ +T APE DY++AAI T L IHV EP GD+LVFL GQ+EIE EE LK + RGLGTK
Sbjct: 583 VDICFTTAPEADYMDAAITTVLTIHVKEPLGDVLVFLPGQEEIEAVEENLKHKIRGLGTK 642
Query: 290 IAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVK 349
I ELIICPIYANLP+ELQAKIFEPTPE ARKVVLATNIAETSLTIDGIKYV+ PGF+K+K
Sbjct: 643 IRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMK 702
Query: 350 SYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIWM--TIL-CQKY 406
SYNP+TGMESLLV PISKASA QRTG + RT PGKC+RLYT NY+ T+ Q+
Sbjct: 703 SYNPRTGMESLLVTPISKASATQRTGRAGRTSPGKCYRLYTAFNYYNDLEDNTVPEIQRT 762
Query: 407 N--ELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEF 464
N ++ + SL + L+NFDF+DPP GALN+ G+LT+ GR+MAEF
Sbjct: 763 NLASVVLSLKSLGIHNLLNFDFMDPPPSEALIKSLELLFALGALNQLGELTKAGRRMAEF 822
Query: 465 PIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGD 524
P+DP LSK IV DKYKCSDEII+IAAML +G SIFYRPKDKQ++ADNA NFH+G+VGD
Sbjct: 823 PLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGPSIFYRPKDKQVHADNAMKNFHVGNVGD 882
Query: 525 RIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVEIDTSIYSN 581
IA L++YN W+E NYST+WC ENYIQV SMKRARDIRDQLEGL RVEID S +N
Sbjct: 883 HIAFLKIYNSWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDVSSNAN 939
>ZFIN|ZDB-GENE-030131-8589 [details] [associations]
symbol:dhx16 "DEAH (Asp-Glu-Ala-His) box
polypeptide 16" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0035987
"endodermal cell differentiation" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-8589 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
GO:GO:0035987 EMBL:BC045393 IPI:IPI00495801 RefSeq:NP_956318.1
UniGene:Dr.76186 ProteinModelPortal:Q7ZVV8 STRING:Q7ZVV8
PRIDE:Q7ZVV8 GeneID:336645 KEGG:dre:336645 InParanoid:Q7ZVV8
NextBio:20811846 ArrayExpress:Q7ZVV8 Bgee:Q7ZVV8 Uniprot:Q7ZVV8
Length = 1054
Score = 1690 (600.0 bits), Expect = 3.6e-176, Sum P(2) = 3.6e-176
Identities = 339/587 (57%), Positives = 433/587 (73%)
Query: 8 EKQQREKCTFEIEDKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTLPIY 67
E+Q+R + E E++++ F S ++ E ESE P S + + +QE R++LPI+
Sbjct: 358 EEQERYQLILE-EEEMITFVSTAITMKGTLSEKESE-PELSQAEKQKQSIQEVRRSLPIF 415
Query: 68 PFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE--------------PRWVAAMSVA 113
P+ E+LL A+ + +L I GETGSGKTTQIPQYL E PR VAAMSVA
Sbjct: 416 PYREDLLAAIGDHQILVIEGETGSGKTTQIPQYLLEEGYTKGGMKIGCTQPRRVAAMSVA 475
Query: 114 ARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEA 173
ARV+QEM VKLG+EVGYSIRFEDCTS++T+LKYMTD MLLRE + EP L SYSV+I+DEA
Sbjct: 476 ARVAQEMSVKLGNEVGYSIRFEDCTSERTILKYMTDGMLLREFLTEPDLASYSVIIIDEA 535
Query: 174 QERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVELF 233
ERTL TD LFGL+KD+ +RPDLK+L++SATLD E+FS +F AP+F+IPGRR+PV+++
Sbjct: 536 HERTLHTDILFGLIKDIARFRPDLKVLVASATLDTERFSSFFDDAPVFRIPGRRFPVDIY 595
Query: 234 YTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAEL 293
YTKAPE DY+EA +V+ LQIHV + GD+LVFLTGQ+EIE E+L++R R LG+KI+EL
Sbjct: 596 YTKAPEADYLEACVVSVLQIHVTQSPGDVLVFLTGQEEIEACCELLQERCRRLGSKISEL 655
Query: 294 IICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNP 353
++ PIYANLP+++QAKIF PTP ARKVV+ATNIAETSLTIDGI YVI PGF K KSYN
Sbjct: 656 LVLPIYANLPSDMQAKIFNPTPPGARKVVVATNIAETSLTIDGIIYVIDPGFCKQKSYNA 715
Query: 354 KTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNY-HRIWMTIL--CQKYN--E 408
KTGMESL+V P S+ASANQR G + R GKCFRLYT + H + T + Q+ N
Sbjct: 716 KTGMESLIVTPCSRASANQRAGRAGRVAAGKCFRLYTAWAFKHEMEETTVPEIQRTNLGN 775
Query: 409 LIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDP 468
++ + SL N L++FDF+DPP GALN G+LT++GR+MAE P+DP
Sbjct: 776 VVLLLKSLGINDLIHFDFMDPPPHETLVLALEQLYALGALNHLGELTKLGRRMAELPVDP 835
Query: 469 KLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIAL 528
LSK I++ ++YKCS+E++TIAAML V NSIFYRPKDK ++ADNARMNF + GD + L
Sbjct: 836 MLSKMILASEQYKCSEEVLTIAAMLSVNNSIFYRPKDKVVHADNARMNFVVPG-GDHLVL 894
Query: 529 LRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVEID 575
L VY W E YST+WC EN+IQ SMKRARD+RDQLEGL R+E++
Sbjct: 895 LNVYTQWVESGYSTQWCFENFIQFRSMKRARDVRDQLEGLMDRIEVE 941
Score = 43 (20.2 bits), Expect = 3.6e-176, Sum P(2) = 3.6e-176
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 35 DNFDEFESELPNKSVVKSTLEMLQEERKTL 64
+ ++ E+E+ ++ + ST + ERK L
Sbjct: 243 EKLEDLEAEIKDEEYLFSTQNLTDRERKDL 272
>UNIPROTKB|O60231 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 EMBL:BA000025 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813 GO:GO:0003724
HOVERGEN:HBG039428 OMA:GTLHREF EMBL:AB001601 EMBL:AB011149
EMBL:BC008825 EMBL:BC009392 IPI:IPI00552073 RefSeq:NP_001157711.1
RefSeq:NP_003578.2 UniGene:Hs.485060 ProteinModelPortal:O60231
SMR:O60231 IntAct:O60231 MINT:MINT-5003862 STRING:O60231
PhosphoSite:O60231 PaxDb:O60231 PRIDE:O60231 DNASU:8449
Ensembl:ENST00000376442 Ensembl:ENST00000383577
Ensembl:ENST00000417308 Ensembl:ENST00000421095
Ensembl:ENST00000424672 Ensembl:ENST00000451456
Ensembl:ENST00000458094 GeneID:8449 KEGG:hsa:8449 UCSC:uc003nqz.3
CTD:8449 GeneCards:GC06M030620 HGNC:HGNC:2739 HPA:HPA051455
MIM:603405 neXtProt:NX_O60231 PharmGKB:PA27205 InParanoid:O60231
OrthoDB:EOG4VHK5Q PhylomeDB:O60231 GenomeRNAi:8449 NextBio:31614
ArrayExpress:O60231 Bgee:O60231 CleanEx:HS_DHX16
Genevestigator:O60231 GermOnline:ENSG00000204560 Uniprot:O60231
Length = 1041
Score = 1653 (586.9 bits), Expect = 9.6e-174, Sum P(2) = 9.6e-174
Identities = 333/592 (56%), Positives = 426/592 (71%)
Query: 5 DAWEKQQREKCTFEIEDKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTL 64
DA ++ + + E E++ ++F + GD E P S E +Q R++L
Sbjct: 345 DAASQEPKYQLVLE-EEETIEFVRATQLQGDE----EPSAPPTSTQAQQKESIQAVRRSL 399
Query: 65 PIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE--------------PRWVAAM 110
P++PF EELL A++ + VL I GETGSGKTTQIPQYL+E PR VAAM
Sbjct: 400 PVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRRVAAM 459
Query: 111 SVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIV 170
SVAARV++EMGVKLG+EVGYSIRFEDCTS++TVL+YMTD MLLRE + EP L SYSV++V
Sbjct: 460 SVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMV 519
Query: 171 DEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPV 230
DEA ERTL TD LFGL+KD+ +RP+LK+L++SAT+D +FS +F AP+F+IPGRR+PV
Sbjct: 520 DEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPV 579
Query: 231 ELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKI 290
++FYTKAPE DY+EA +V+ LQIHV +P GDILVFLTGQ+EIE A E+L+ R R LG+KI
Sbjct: 580 DIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKI 639
Query: 291 AELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKS 350
EL++ PIYANLP+++QA+IF+PTP ARKVV+ATNIAETSLTI+GI YV+ PGF K KS
Sbjct: 640 RELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKS 699
Query: 351 YNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNY-HRIWMTILCQ----K 405
YNP+TGMESL V P SKASANQR G + R GKCFRLYT Y H + T + +
Sbjct: 700 YNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTS 759
Query: 406 YNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFP 465
++ + SL + L++FDF+DPP GALN G+LT GR+MAE P
Sbjct: 760 LGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELP 819
Query: 466 IDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDR 525
+DP LSK I++ +KY CS+EI+T+AAML V NSIFYRPKDK ++ADNAR+NF L GD
Sbjct: 820 VDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPG-GDH 878
Query: 526 IALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVEIDTS 577
+ LL VY W E YS++WC EN++Q SM+RARD+R+QLEGL RVE+ S
Sbjct: 879 LVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLS 930
Score = 57 (25.1 bits), Expect = 9.6e-174, Sum P(2) = 9.6e-174
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 5 DAWEKQQREKCTFEIEDKIVDFFSESVFDGDNFDEFES--ELPNKSVVKST---LEMLQE 59
D WE+ +RE+ ++E++ D F+E V D D + E +K + L+M +E
Sbjct: 162 DEWERTERERLQ-DLEER--DAFAERVRQRDK-DRTRNVLERSDKKAYEEAQKRLKMAEE 217
Query: 60 ERKTL 64
+RK +
Sbjct: 218 DRKAM 222
>RGD|1302963 [details] [associations]
symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box polypeptide 16"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1302963 GO:GO:0005524 GO:GO:0003676 EMBL:BX883048
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
HOVERGEN:HBG039428 CTD:8449 EMBL:CH474118 IPI:IPI00421973
RefSeq:NP_997661.1 UniGene:Rn.6832 GeneID:294232 KEGG:rno:294232
UCSC:RGD:1302963 NextBio:637799 Genevestigator:Q6MG13
Uniprot:Q6MG13
Length = 1044
Score = 1653 (586.9 bits), Expect = 9.6e-174, Sum P(2) = 9.6e-174
Identities = 335/589 (56%), Positives = 426/589 (72%)
Query: 5 DAWEKQQREKCTFEIEDKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTL 64
DA ++ + + E ED+ ++F + GD E S P S E +Q R++L
Sbjct: 347 DAAAQEPQYQLVLE-EDETIEFVRAAQLQGD---EEPSSGPPLSAQAQQKESIQAVRRSL 402
Query: 65 PIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE--------------PRWVAAM 110
P++PF EELL A++ + VL I GETGSGKTTQIPQYL+E PR VAAM
Sbjct: 403 PVFPFREELLTAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACTQPRRVAAM 462
Query: 111 SVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIV 170
SVAARV++EMGVKLG+EVGYSIRFEDCTS++TVL+YMTD MLLRE + EP L SYSV++V
Sbjct: 463 SVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMV 522
Query: 171 DEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPV 230
DEA ERTL TD LFGL+KD+ +RP+LK+L++SATLD +FS +F AP+F+IPGRR+PV
Sbjct: 523 DEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSAFFDDAPVFRIPGRRFPV 582
Query: 231 ELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKI 290
++FYTKAPE DY+EA +V+ LQIHV +P GDILVFLTGQ+EIE A E+L+ R R LG+KI
Sbjct: 583 DIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKI 642
Query: 291 AELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKS 350
EL++ PIYANLP+++QA+IF+PTP ARKVV+ATNIAETSLTI+GI YV+ PGF K KS
Sbjct: 643 RELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKS 702
Query: 351 YNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNY-HRIWMTILCQ----K 405
YNP+TGMESL V P SKASANQR G + R GKCFRLYT Y H + T + +
Sbjct: 703 YNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTS 762
Query: 406 YNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFP 465
++ + SL + L++FDF+DPP GALN G+LT GR+MAE P
Sbjct: 763 LGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELP 822
Query: 466 IDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDR 525
+DP LSK I++ +KY CS+EI+T+AAML V NSIFYRPKDK ++ADNAR+NF L GD
Sbjct: 823 VDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPG-GDH 881
Query: 526 IALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVEI 574
+ LL VY W E YS++WC EN++Q SM+RARD+R+QLEGL RVE+
Sbjct: 882 LVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEV 930
Score = 57 (25.1 bits), Expect = 9.6e-174, Sum P(2) = 9.6e-174
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 5 DAWEKQQREKCTFEIEDKIVDFFSESVFDGDNFDEFES--ELPNKSVVKST---LEMLQE 59
D WE+ +RE+ ++E++ D F+E V D D + E +K + L+M +E
Sbjct: 164 DEWERTERERLQ-DLEER--DAFAERVRQRDK-DRTRNVLERSDKKAYEEAQKRLKMAEE 219
Query: 60 ERKTL 64
+RK +
Sbjct: 220 DRKAM 224
>UNIPROTKB|E1BF68 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12813 GeneTree:ENSGT00700000104241 OMA:GTLHREF
CTD:8449 EMBL:DAAA02055402 IPI:IPI00691986 RefSeq:NP_001193139.1
UniGene:Bt.22201 PRIDE:E1BF68 Ensembl:ENSBTAT00000009148
GeneID:506405 KEGG:bta:506405 NextBio:20867594 Uniprot:E1BF68
Length = 1045
Score = 1651 (586.2 bits), Expect = 1.6e-173, Sum P(2) = 1.6e-173
Identities = 334/592 (56%), Positives = 425/592 (71%)
Query: 5 DAWEKQQREKCTFEIEDKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTL 64
DA ++ + + E E++ ++F + GD E P E +Q R++L
Sbjct: 349 DAASQEPKYQLVLE-EEETIEFVRATQLQGDE----EPSAPPAPTQAQQKESIQAVRRSL 403
Query: 65 PIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE--------------PRWVAAM 110
P++PF EELL A++ + VL I GETGSGKTTQIPQYL+E PR VAAM
Sbjct: 404 PVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACTQPRRVAAM 463
Query: 111 SVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIV 170
SVAARV++EMGVKLG+EVGYSIRFEDCTS++TVL+YMTD MLLRE + EP L SYSV++V
Sbjct: 464 SVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMV 523
Query: 171 DEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPV 230
DEA ERTL TD LFGL+KD+ +RP+LK+L++SATLD +FS +F APIF+IPGRR+PV
Sbjct: 524 DEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPIFRIPGRRFPV 583
Query: 231 ELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKI 290
++FYTKAPE DY+EA +V+ LQIHV +P GDILVFLTGQ+EIE A E+L+ R R LG+KI
Sbjct: 584 DIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKI 643
Query: 291 AELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKS 350
EL++ PIYANLP+++QA+IF+PTP ARKVV+ATNIAETSLTI+GI YV+ PGF K KS
Sbjct: 644 RELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKS 703
Query: 351 YNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNY-HRIWMTILCQ----K 405
YNP+TGMESL V P SKASANQR G + R GKCFRLYT Y H + T + +
Sbjct: 704 YNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTS 763
Query: 406 YNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFP 465
++ + SL + L++FDF+DPP GALN G+LT GR+MAE P
Sbjct: 764 LGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELP 823
Query: 466 IDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDR 525
+DP LSK I++ +KY CS+EI+T+AAML V NSIFYRPKDK ++ADNAR+NF L GD
Sbjct: 824 VDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPG-GDH 882
Query: 526 IALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVEIDTS 577
+ LL VY W E YS++WC EN++Q SM+RARD+R+QLEGL RVE+ S
Sbjct: 883 LVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLS 934
Score = 57 (25.1 bits), Expect = 1.6e-173, Sum P(2) = 1.6e-173
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 5 DAWEKQQREKCTFEIEDKIVDFFSESVFDGDNFDEFES--ELPNKSVVKST---LEMLQE 59
D WE+ +RE+ ++E++ D F+E V D D + E +K + L+M +E
Sbjct: 166 DEWERTERERLQ-DLEER--DAFAERVRQRDK-DRTRNVLERSDKKAYEEAQKRLKMAEE 221
Query: 60 ERKTL 64
+RK +
Sbjct: 222 DRKAM 226
>UNIPROTKB|F1RU83 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:GTLHREF EMBL:CU480634
Ensembl:ENSSSCT00000001498 Uniprot:F1RU83
Length = 1045
Score = 1649 (585.5 bits), Expect = 2.5e-173, Sum P(2) = 2.5e-173
Identities = 333/592 (56%), Positives = 425/592 (71%)
Query: 5 DAWEKQQREKCTFEIEDKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTL 64
DA ++ + + E E++ ++F + GD E P E +Q R++L
Sbjct: 349 DAASQEPKYQLVLE-EEETIEFVRATQLQGDE----EPAAPPAPTQAQQKESIQAVRRSL 403
Query: 65 PIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE--------------PRWVAAM 110
P++PF EELL AV+ + +L I GETGSGKTTQIPQYL+E PR VAAM
Sbjct: 404 PVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGMKIACTQPRRVAAM 463
Query: 111 SVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIV 170
SVAARV++EMGVKLG+EVGYSIRFEDCTS++TVL+YMTD MLLRE + EP L SYSV++V
Sbjct: 464 SVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMV 523
Query: 171 DEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPV 230
DEA ERTL TD LFGL+KD+ +RP+LK+L++SATLD +FS +F AP+F+IPGRR+PV
Sbjct: 524 DEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPV 583
Query: 231 ELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKI 290
++FYTKAPE DY+EA +V+ LQIHV +P GDILVFLTGQ+EIE A E+L+ R R LG+KI
Sbjct: 584 DIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKI 643
Query: 291 AELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKS 350
EL++ PIYANLP+++QA+IF+PTP ARKVV+ATNIAETSLTI+GI YV+ PGF K KS
Sbjct: 644 RELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKS 703
Query: 351 YNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNY-HRIWMTILCQ----K 405
YNP+TGMESL V P SKASANQR G + R GKCFRLYT Y H + T + +
Sbjct: 704 YNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTS 763
Query: 406 YNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFP 465
++ + SL + L++FDF+DPP GALN G+LT GR+MAE P
Sbjct: 764 LGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELP 823
Query: 466 IDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDR 525
+DP LSK I++ +KY CS+EI+T+AAML V NSIFYRPKDK ++ADNAR+NF L GD
Sbjct: 824 VDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPG-GDH 882
Query: 526 IALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVEIDTS 577
+ LL VY W E YS++WC EN++Q SM+RARD+R+QLEGL RVE+ S
Sbjct: 883 LVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLS 934
Score = 57 (25.1 bits), Expect = 2.5e-173, Sum P(2) = 2.5e-173
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 5 DAWEKQQREKCTFEIEDKIVDFFSESVFDGDNFDEFES--ELPNKSVVKST---LEMLQE 59
D WE+ +RE+ ++E++ D F+E V D D + E +K + L+M +E
Sbjct: 166 DEWERTERERLQ-DLEER--DAFAERVRQRDK-DRTRNVLERSDKKAYEEAQKRLKMAEE 221
Query: 60 ERKTL 64
+RK +
Sbjct: 222 DRKAM 226
>UNIPROTKB|Q767K6 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 EMBL:AB113357 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB113356 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
RefSeq:NP_001116578.1 UniGene:Ssc.15273 ProteinModelPortal:Q767K6
GeneID:100144456 KEGG:ssc:100144456 Uniprot:Q767K6
Length = 1045
Score = 1649 (585.5 bits), Expect = 2.5e-173, Sum P(2) = 2.5e-173
Identities = 333/592 (56%), Positives = 425/592 (71%)
Query: 5 DAWEKQQREKCTFEIEDKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTL 64
DA ++ + + E E++ ++F + GD E P E +Q R++L
Sbjct: 349 DAASQEPKYQLVLE-EEETIEFVRATQLQGDE----EPAAPPAPTQAQQKESIQAVRRSL 403
Query: 65 PIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE--------------PRWVAAM 110
P++PF EELL AV+ + +L I GETGSGKTTQIPQYL+E PR VAAM
Sbjct: 404 PVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGMKIACTQPRRVAAM 463
Query: 111 SVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIV 170
SVAARV++EMGVKLG+EVGYSIRFEDCTS++TVL+YMTD MLLRE + EP L SYSV++V
Sbjct: 464 SVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMV 523
Query: 171 DEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPV 230
DEA ERTL TD LFGL+KD+ +RP+LK+L++SATLD +FS +F AP+F+IPGRR+PV
Sbjct: 524 DEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPV 583
Query: 231 ELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKI 290
++FYTKAPE DY+EA +V+ LQIHV +P GDILVFLTGQ+EIE A E+L+ R R LG+KI
Sbjct: 584 DIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKI 643
Query: 291 AELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKS 350
EL++ PIYANLP+++QA+IF+PTP ARKVV+ATNIAETSLTI+GI YV+ PGF K KS
Sbjct: 644 RELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKS 703
Query: 351 YNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNY-HRIWMTILCQ----K 405
YNP+TGMESL V P SKASANQR G + R GKCFRLYT Y H + T + +
Sbjct: 704 YNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTS 763
Query: 406 YNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFP 465
++ + SL + L++FDF+DPP GALN G+LT GR+MAE P
Sbjct: 764 LGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELP 823
Query: 466 IDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDR 525
+DP LSK I++ +KY CS+EI+T+AAML V NSIFYRPKDK ++ADNAR+NF L GD
Sbjct: 824 VDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPG-GDH 882
Query: 526 IALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVEIDTS 577
+ LL VY W E YS++WC EN++Q SM+RARD+R+QLEGL RVE+ S
Sbjct: 883 LVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLS 934
Score = 57 (25.1 bits), Expect = 2.5e-173, Sum P(2) = 2.5e-173
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 5 DAWEKQQREKCTFEIEDKIVDFFSESVFDGDNFDEFES--ELPNKSVVKST---LEMLQE 59
D WE+ +RE+ ++E++ D F+E V D D + E +K + L+M +E
Sbjct: 166 DEWERTERERLQ-DLEER--DAFAERVRQRDK-DRTRNVLERSDKKAYEEAQKRLKMAEE 221
Query: 60 ERKTL 64
+RK +
Sbjct: 222 DRKAM 226
>FB|FBgn0086444 [details] [associations]
symbol:l(2)37Cb "lethal (2) 37Cb" species:7227 "Drosophila
melanogaster" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12813 GO:GO:0016779 GeneTree:ENSGT00700000104241
OMA:GTLHREF EMBL:AY061330 RefSeq:NP_609946.1 UniGene:Dm.468
SMR:Q9VIZ3 IntAct:Q9VIZ3 MINT:MINT-318410 STRING:Q9VIZ3
EnsemblMetazoa:FBtr0081163 GeneID:35192 KEGG:dme:Dmel_CG10689
UCSC:CG10689-RA FlyBase:FBgn0086444 InParanoid:Q9VIZ3
OrthoDB:EOG459ZWG GenomeRNAi:35192 NextBio:792305 Uniprot:Q9VIZ3
Length = 894
Score = 1684 (597.9 bits), Expect = 2.6e-173, P = 2.6e-173
Identities = 344/592 (58%), Positives = 429/592 (72%)
Query: 4 FDAWEKQQREKCTFEIEDKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKT 63
F A + + E+ ++D+I DF DG ++ S P + + L E R++
Sbjct: 194 FGAKDAKAEEEYELLLDDQI-DFIQALTLDGSR-EKSSSRQPELTEKERKRLTLDETRRS 251
Query: 64 LPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE--------------PRWVAA 109
LP+YPF E+L+ AV + VL I GETGSGKTTQ+PQYL E PR VAA
Sbjct: 252 LPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEAGFTKDKKMIGCTQPRRVAA 311
Query: 110 MSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLI 169
MSVAARV++EMGVKLG+EVGYSIRFEDCTSD+T+LKYMTD L RE + EP L SYSV+I
Sbjct: 312 MSVAARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTDGTLHREFLSEPDLASYSVMI 371
Query: 170 VDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYP 229
+DEA ERTL TD LFGL+KD+ +RP+LKLLISSATLDAEKFS +F APIF+IPGRRYP
Sbjct: 372 IDEAHERTLHTDILFGLVKDIARFRPELKLLISSATLDAEKFSAFFDDAPIFRIPGRRYP 431
Query: 230 VELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTK 289
V++FYTKAPE DYI+A V+ LQIH +P GDILVFLTGQDEIE +E+L R + LG+K
Sbjct: 432 VDIFYTKAPEADYIDACCVSVLQIHATQPLGDILVFLTGQDEIETCQEVLHDRVKRLGSK 491
Query: 290 IAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVK 349
I ELI+ P+YANLP+++QAKIFEPTP ARKV+LATNIAETSLTID I YVI PGFAK
Sbjct: 492 IRELIVIPVYANLPSDMQAKIFEPTPPNARKVILATNIAETSLTIDNIIYVIDPGFAKQN 551
Query: 350 SYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNY-HRIWMTIL--CQKY 406
++N +TGMESL+V PISKASANQR G + RT PGKCFRLYT Y H + + Q+
Sbjct: 552 NFNSRTGMESLMVVPISKASANQRAGRAGRTAPGKCFRLYTAWAYKHELEDNTVPEIQRI 611
Query: 407 N--ELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEF 464
N + + +L N L++FDF+DPP GALN G+LT++GR+MAEF
Sbjct: 612 NLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGELTKLGRRMAEF 671
Query: 465 PIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNF-HLGDVG 523
P+DP + K +++ +KYKCS+E++TIAAML V ++IFYRPKDK I+AD AR NF H+ G
Sbjct: 672 PVDPMMGKMLLASEKYKCSEEMVTIAAMLSVNSAIFYRPKDKIIHADTARKNFNHMH--G 729
Query: 524 DRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVEID 575
D ++LL+VYN W E +YST+WC EN+IQ SMKRARD+R+QL GL RVEID
Sbjct: 730 DHLSLLQVYNQWAETDYSTQWCYENFIQYRSMKRARDVREQLVGLMQRVEID 781
>UNIPROTKB|F1PGL2 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
GeneTree:ENSGT00700000104241 OMA:GTLHREF CTD:8449 EMBL:AAEX03008197
RefSeq:XP_538827.2 Ensembl:ENSCAFT00000000685 GeneID:481706
KEGG:cfa:481706 Uniprot:F1PGL2
Length = 1042
Score = 1642 (583.1 bits), Expect = 1.4e-172, Sum P(2) = 1.4e-172
Identities = 333/592 (56%), Positives = 429/592 (72%)
Query: 5 DAWEKQQREKCTFEIEDKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTL 64
DA ++ + + E E++ ++F + G+ S P+++ K E +Q R++L
Sbjct: 346 DAASQEPKYQLVLE-EEETIEFVRATQLQGNEEPSGPSP-PSQAQQK---ESVQAVRRSL 400
Query: 65 PIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE--------------PRWVAAM 110
P++PF EELL A++ + VL I GETGSGKTTQIPQYL+E PR VAAM
Sbjct: 401 PVFPFREELLAAIADHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACTQPRRVAAM 460
Query: 111 SVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIV 170
SVAARV++EMGVKLG+EVGYSIRFEDCTS++TVL+YMTD MLLRE + EP L SYSV++V
Sbjct: 461 SVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMV 520
Query: 171 DEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPV 230
DEA ERTL TD LFGL+KD+ +RP+LK+L++SATLD +FS +F AP+F+IPGRR+PV
Sbjct: 521 DEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPV 580
Query: 231 ELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKI 290
++FYTKAPE DY+EA +V+ LQIHV +P GDILVFLTGQ+EIE A E+L+ R R LG+KI
Sbjct: 581 DIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKI 640
Query: 291 AELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKS 350
EL++ PIYANLP+++QA+IF+PTP ARKVV+ATNIAETSLTI+GI YV+ PGF K KS
Sbjct: 641 RELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKS 700
Query: 351 YNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNY-HRIWMTILCQ----K 405
YNP+TGMESL V P SKASANQR G + R GKCFRLYT Y H + T + +
Sbjct: 701 YNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTS 760
Query: 406 YNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFP 465
++ + SL + L++FDF+DPP GALN G+LT GR+MAE P
Sbjct: 761 LGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELP 820
Query: 466 IDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDR 525
+DP LSK I++ +KY CS+EI+T+AAML V NSIFYRPKDK ++ADNAR+NF L GD
Sbjct: 821 VDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPG-GDH 879
Query: 526 IALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVEIDTS 577
+ LL VY W E YS++WC EN++Q SM+RARD+R+QLEGL RVE+ S
Sbjct: 880 LVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLS 931
Score = 57 (25.1 bits), Expect = 1.4e-172, Sum P(2) = 1.4e-172
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 5 DAWEKQQREKCTFEIEDKIVDFFSESVFDGDNFDEFES--ELPNKSVVKST---LEMLQE 59
D WE+ +RE+ ++E++ D F+E V D D + E +K + L+M +E
Sbjct: 163 DEWERTERERLQ-DLEER--DAFAERVRQRDK-DRTRNVLERSDKKAYEEAQKRLKMAEE 218
Query: 60 ERKTL 64
+RK +
Sbjct: 219 DRKAM 223
>DICTYBASE|DDB_G0285937 [details] [associations]
symbol:dhx16 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR002483 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01480
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285937 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 EMBL:AAFI02000082 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 Gene3D:1.20.1390.10 KO:K12813 GO:GO:0003724
RefSeq:XP_638017.1 EnsemblProtists:DDB0233398 GeneID:8625368
KEGG:ddi:DDB_G0285937 OMA:YLLEREV Uniprot:Q54MH3
Length = 1106
Score = 1664 (590.8 bits), Expect = 3.4e-171, P = 3.4e-171
Identities = 344/582 (59%), Positives = 420/582 (72%)
Query: 13 EKCTFEIEDKIVDFFSESVF-DGDNFDEFESELPNKSVVKSTLEMLQEERKTLPIYPFWE 71
E+ + ED+I +F E V G D P +QE RK+LP+YP+ E
Sbjct: 416 EEYEYVFEDQI-EFIKEEVLKQGQKGDGVMILKPGDDGSAQAKMTIQEVRKSLPVYPYRE 474
Query: 72 ELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE-------------PRWVAAMSVAARVSQ 118
+L+ AV Y VL IVGETGSGKTTQIPQYL+E PR VAAMSVAARV++
Sbjct: 475 QLIDAVREYQVLIIVGETGSGKTTQIPQYLHEAGFSKTGKIGCTQPRRVAAMSVAARVAE 534
Query: 119 EMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTL 178
E+G KLG+EVGYSIRFEDCTS KTVL+YMTD ML+RE + P L SYSVLI+DEA ERTL
Sbjct: 535 EVGCKLGNEVGYSIRFEDCTSQKTVLQYMTDGMLVREFLTAPDLASYSVLIIDEAHERTL 594
Query: 179 STDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFYTKAP 238
TD LFGLLKD+ +RPDLKLLISSAT+DAE+FSDYF AP F IPGR+Y V YT+AP
Sbjct: 595 HTDILFGLLKDITRFRPDLKLLISSATMDAERFSDYFDGAPTFNIPGRKYEVTTHYTQAP 654
Query: 239 EVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPI 298
E DY++AA+VT LQIH+ EP GDILVFLTGQ+E+++A E+L+ RTRGLGTKI ELII I
Sbjct: 655 EADYLDAAVVTVLQIHITEPLGDILVFLTGQEEVDQAAEMLQTRTRGLGTKIKELIITRI 714
Query: 299 YANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGME 358
Y+ LPT+LQAKIFEPTP ARKVVLATNIAETSLTIDGI YVI PGF K K +NP+TGME
Sbjct: 715 YSTLPTDLQAKIFEPTPPNARKVVLATNIAETSLTIDGIIYVIDPGFCKQKMFNPRTGME 774
Query: 359 SLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNY-HRIWMTIL--CQKYN--ELIWKM 413
SL++ P+S+ASANQR G + R PGKCFRL+T + + + + Q+ N ++ +
Sbjct: 775 SLVITPVSRASANQRKGRAGRVAPGKCFRLFTAWAFDNELEENTIPEIQRTNLGNVVLLL 834
Query: 414 LSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKT 473
S+ N L+NFDF+DPP GALN GQLT++GR+MAEFP+DP+LSK
Sbjct: 835 KSMGINDLMNFDFMDPPPAQTLIAALEQLYALGALNDRGQLTKLGRKMAEFPVDPQLSKM 894
Query: 474 IVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNAR-MNFHLGDVGDRIALLRVY 532
I++ +KYKCS+EI+TI AML VGN+IFYRPKDK AD AR + FH GD + L+ V+
Sbjct: 895 IIASEKYKCSEEILTICAMLSVGNTIFYRPKDKAFAADAARKLFFH--PQGDHLTLMNVF 952
Query: 533 NCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVEI 574
N WRE Y+ +WC EN+IQ SMKRA+D+RDQLE L RVEI
Sbjct: 953 NQWRESGYAVQWCFENFIQHRSMKRAQDVRDQLELLLERVEI 994
>WB|WBGene00003392 [details] [associations]
symbol:mog-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0048589
"developmental growth" evidence=IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001482 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0002119 GO:GO:0008380 GO:GO:0006810 GO:GO:0018996
GO:GO:0006397 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0048589 GO:GO:0010172 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12813 EMBL:AF286900 EMBL:Z81462
EMBL:Z81457 PIR:T18832 RefSeq:NP_497027.1 UniGene:Cel.17139
ProteinModelPortal:O45244 SMR:O45244 DIP:DIP-24771N IntAct:O45244
MINT:MINT-1105817 STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6
GeneID:175117 KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117
WormBase:C04H5.6 GeneTree:ENSGT00700000104241 InParanoid:O45244
OMA:GTLHREF NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 1596 (566.9 bits), Expect = 6.4e-166, Sum P(2) = 6.4e-166
Identities = 333/587 (56%), Positives = 424/587 (72%)
Query: 11 QREKCTFEIE-DKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTLPIYPF 69
+R++ FE+ D+ VDF G N + E+E K K ++E E RK+LP+Y F
Sbjct: 316 KRKEQEFELLLDEKVDFIQALQMPGTNEEVVETEAEKK---KMSIE---ETRKSLPVYAF 369
Query: 70 WEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE--------------PRWVAAMSVAAR 115
+ ++AV + VL I GETGSGKTTQ+PQYLYE PR VAAMSVAAR
Sbjct: 370 RDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIGCTQPRRVAAMSVAAR 429
Query: 116 VSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQE 175
V+ E+G KLG +VGYSIRFEDCTS+KTVLKYMTD MLLRE + EP L SYSV+++DEA E
Sbjct: 430 VADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEPDLASYSVMMIDEAHE 489
Query: 176 RTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFYT 235
RTL TD LFGL+KD+ +R DLKLLISSATLDAEKFS +F APIF+IPGRR+PV+++YT
Sbjct: 490 RTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDAPIFRIPGRRFPVDIYYT 549
Query: 236 KAPEVDYIEAAIVTALQIHVNEPT-GDILVFLTGQDEIERAEEILKQRTRGLGTKIAELI 294
+APE DY++AAIVT +QIH+ +P GDILVFLTGQ+EIE +E L +R++ LG+KI ELI
Sbjct: 550 QAPEADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEIETVQEALMERSKALGSKIKELI 609
Query: 295 ICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPK 354
P+YANLP++LQAKIFEPTP+ ARKVVLATNIAETS+TIDGI YVI PGF+K S++ +
Sbjct: 610 PLPVYANLPSDLQAKIFEPTPKDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDAR 669
Query: 355 TGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNY-HRIWMTIL--CQKYN--EL 409
+G+E L V ISKA+ANQR G + RTGPGKCFRLYT Y H + + Q+ N +
Sbjct: 670 SGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAWAYKHELEEQPIPEIQRTNLGNV 729
Query: 410 IWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPK 469
+ + SL + LV+FDF+DPP GALN G+LT++GR+MAEFP DP
Sbjct: 730 VLMLKSLGIHDLVHFDFLDPPPQETLVIALEQLYALGALNHRGELTKLGRRMAEFPCDPC 789
Query: 470 LSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALL 529
+SK I++ +KY+CS+EI+TIAAML ++FYRPK + I+AD+AR F GD I L+
Sbjct: 790 MSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKAQVIHADSARKGFW-SPAGDHITLM 848
Query: 530 RVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVEIDT 576
VYN W+E ++S WC ENY+Q +MKRARD+RDQL GL RVEI+T
Sbjct: 849 NVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVGLLERVEIET 895
Score = 40 (19.1 bits), Expect = 6.4e-166, Sum P(2) = 6.4e-166
Identities = 13/58 (22%), Positives = 26/58 (44%)
Query: 6 AWEK-QQREKCTFEIEDKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERK 62
A EK +REK E K++++ GD LP+ S + + ++++ +
Sbjct: 230 AREKLTKREKADMEYRKKVLEYTKAHGKAGDVMKMKRYHLPDASTKQIPSQYVEDDEE 287
>UNIPROTKB|O45244 [details] [associations]
symbol:mog-4 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-4" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001482 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0002119
GO:GO:0008380 GO:GO:0006810 GO:GO:0018996 GO:GO:0006397
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 EMBL:AF286900 EMBL:Z81462 EMBL:Z81457 PIR:T18832
RefSeq:NP_497027.1 UniGene:Cel.17139 ProteinModelPortal:O45244
SMR:O45244 DIP:DIP-24771N IntAct:O45244 MINT:MINT-1105817
STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6 GeneID:175117
KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117 WormBase:C04H5.6
GeneTree:ENSGT00700000104241 InParanoid:O45244 OMA:GTLHREF
NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 1596 (566.9 bits), Expect = 6.4e-166, Sum P(2) = 6.4e-166
Identities = 333/587 (56%), Positives = 424/587 (72%)
Query: 11 QREKCTFEIE-DKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTLPIYPF 69
+R++ FE+ D+ VDF G N + E+E K K ++E E RK+LP+Y F
Sbjct: 316 KRKEQEFELLLDEKVDFIQALQMPGTNEEVVETEAEKK---KMSIE---ETRKSLPVYAF 369
Query: 70 WEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE--------------PRWVAAMSVAAR 115
+ ++AV + VL I GETGSGKTTQ+PQYLYE PR VAAMSVAAR
Sbjct: 370 RDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIGCTQPRRVAAMSVAAR 429
Query: 116 VSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQE 175
V+ E+G KLG +VGYSIRFEDCTS+KTVLKYMTD MLLRE + EP L SYSV+++DEA E
Sbjct: 430 VADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEPDLASYSVMMIDEAHE 489
Query: 176 RTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFYT 235
RTL TD LFGL+KD+ +R DLKLLISSATLDAEKFS +F APIF+IPGRR+PV+++YT
Sbjct: 490 RTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDAPIFRIPGRRFPVDIYYT 549
Query: 236 KAPEVDYIEAAIVTALQIHVNEPT-GDILVFLTGQDEIERAEEILKQRTRGLGTKIAELI 294
+APE DY++AAIVT +QIH+ +P GDILVFLTGQ+EIE +E L +R++ LG+KI ELI
Sbjct: 550 QAPEADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEIETVQEALMERSKALGSKIKELI 609
Query: 295 ICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPK 354
P+YANLP++LQAKIFEPTP+ ARKVVLATNIAETS+TIDGI YVI PGF+K S++ +
Sbjct: 610 PLPVYANLPSDLQAKIFEPTPKDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDAR 669
Query: 355 TGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNY-HRIWMTIL--CQKYN--EL 409
+G+E L V ISKA+ANQR G + RTGPGKCFRLYT Y H + + Q+ N +
Sbjct: 670 SGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAWAYKHELEEQPIPEIQRTNLGNV 729
Query: 410 IWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPK 469
+ + SL + LV+FDF+DPP GALN G+LT++GR+MAEFP DP
Sbjct: 730 VLMLKSLGIHDLVHFDFLDPPPQETLVIALEQLYALGALNHRGELTKLGRRMAEFPCDPC 789
Query: 470 LSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALL 529
+SK I++ +KY+CS+EI+TIAAML ++FYRPK + I+AD+AR F GD I L+
Sbjct: 790 MSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKAQVIHADSARKGFW-SPAGDHITLM 848
Query: 530 RVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVEIDT 576
VYN W+E ++S WC ENY+Q +MKRARD+RDQL GL RVEI+T
Sbjct: 849 NVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVGLLERVEIET 895
Score = 40 (19.1 bits), Expect = 6.4e-166, Sum P(2) = 6.4e-166
Identities = 13/58 (22%), Positives = 26/58 (44%)
Query: 6 AWEK-QQREKCTFEIEDKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERK 62
A EK +REK E K++++ GD LP+ S + + ++++ +
Sbjct: 230 AREKLTKREKADMEYRKKVLEYTKAHGKAGDVMKMKRYHLPDASTKQIPSQYVEDDEE 287
>ASPGD|ASPL0000006947 [details] [associations]
symbol:AN5827 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813
OMA:RIDDHRD OrthoDB:EOG4SBJ63 RefSeq:XP_663431.1
ProteinModelPortal:Q5B0V3 EnsemblFungi:CADANIAT00007219
GeneID:2871194 KEGG:ani:AN5827.2 Uniprot:Q5B0V3
Length = 1128
Score = 1538 (546.5 bits), Expect = 7.7e-158, P = 7.7e-158
Identities = 312/542 (57%), Positives = 394/542 (72%)
Query: 55 EMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE----------- 103
+ +++ RK LPIY F ++++QAV + VL IVGETGSGKTTQ+PQYL+E
Sbjct: 472 QTIEDTRKKLPIYQFRDQIIQAVHDHQVLIIVGETGSGKTTQLPQYLHEAGYTKNGMKVG 531
Query: 104 ---PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEP 160
PR VAAMSVAARV++EMGVKLG+EVGYSIRFED TSDKTVLKYMTD MLLRE++ EP
Sbjct: 532 CTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDNTSDKTVLKYMTDGMLLRELLTEP 591
Query: 161 SLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPI 220
L YS L++DEA ERT+ TD GLLKD+ RPDLKLLISSAT+DA+KF YF +API
Sbjct: 592 DLGQYSALMIDEAHERTVPTDIACGLLKDIAKARPDLKLLISSATMDAQKFQSYFDNAPI 651
Query: 221 FKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILK 280
F IPGR Y V++ YT+ PE +Y+ AAI T QIHV++ GDILVFLTGQ+EIE AE+ L+
Sbjct: 652 FNIPGRMYNVDIHYTQQPEANYLAAAITTVFQIHVSQGPGDILVFLTGQEEIEAAEQSLQ 711
Query: 281 QRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYV 340
+ R LG KI E+IICPIYANLP++LQAKIFEPTP +ARKVVLATNIAETSLTIDGI YV
Sbjct: 712 ETARKLGNKIPEMIICPIYANLPSDLQAKIFEPTPPKARKVVLATNIAETSLTIDGIVYV 771
Query: 341 IHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIW-- 398
I PGF K +NP+TGMESL+V P S+ASANQR G + R GPGKCFRLYT Y+
Sbjct: 772 IDPGFVKENVFNPRTGMESLVVTPCSRASANQRAGRAGRVGPGKCFRLYTKWAYYNELEE 831
Query: 399 -MTILCQKYN--ELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLT 455
T Q+ N +I + SL + L+ FDF+DPP GALN G+LT
Sbjct: 832 STTPEIQRTNLSSVILMLKSLGIDQLLEFDFMDPPPAETIIRALEQLYALGALNDRGELT 891
Query: 456 RVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARM 515
++GRQMAEFP DP L+K I++ DK+ C +E+++I +ML +++F+RPKDK+I+AD+AR
Sbjct: 892 KIGRQMAEFPTDPMLAKAILAADKHGCVEEVLSIVSMLGEASALFFRPKDKKIHADSARN 951
Query: 516 NFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVEID 575
F + D GD + LL ++N W + ++S W +EN++Q S+ RARD+RDQL L RVE+
Sbjct: 952 RFTVKDGGDHLTLLNIWNQWVDSDFSYVWAKENFLQQRSLTRARDVRDQLAKLCDRVEVT 1011
Query: 576 TS 577
S
Sbjct: 1012 VS 1013
>POMBASE|SPBC19C2.01 [details] [associations]
symbol:cdc28 "ATP-dependent RNA helicase Cdc28"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=ISO] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPBC19C2.01
GO:GO:0005524 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0046540 GO:GO:0004004 EMBL:U48733 PIR:T46568 PIR:T50372
RefSeq:NP_595686.2 ProteinModelPortal:Q10752 STRING:Q10752
EnsemblFungi:SPBC19C2.01.1 GeneID:2540707 KEGG:spo:SPBC19C2.01
HOGENOM:HOG000175261 KO:K12813 OMA:RIDDHRD OrthoDB:EOG4SBJ63
NextBio:20801829 GO:GO:0045292 Uniprot:Q10752
Length = 1055
Score = 1517 (539.1 bits), Expect = 2.3e-157, Sum P(2) = 2.3e-157
Identities = 310/575 (53%), Positives = 406/575 (70%)
Query: 20 EDKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSG 79
E + +DF ++ +N + + ++ + V KS L+ RK+LP+Y + ++LL+A++
Sbjct: 379 ESQQIDFLLDTKLSAENPVDTD-KMTDVKVEKS----LESSRKSLPVYQYKDDLLKAINE 433
Query: 80 YPVLAIVGETGSGKTTQIPQYLYE--------------PRWVAAMSVAARVSQEMGVKLG 125
Y VL IV ETGSGKTTQ+PQ+L+E PR VAAMSVAARV++EM V+LG
Sbjct: 434 YQVLLIVAETGSGKTTQLPQFLHEAGYTKGNKKICCTQPRRVAAMSVAARVAKEMDVRLG 493
Query: 126 HEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFG 185
EVGYSIRFE+ TS+KTV+KY+TD MLLRE + EP L SYSV+I+DEA ERTL TD LFG
Sbjct: 494 QEVGYSIRFENATSEKTVIKYLTDGMLLREFLTEPDLASYSVIIIDEAHERTLHTDILFG 553
Query: 186 LLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEA 245
L+KD+ +RPDLK+LISSAT+DAEKFS YF AP+F +PGRRYPV+++YT PE +YI+A
Sbjct: 554 LVKDIARFRPDLKVLISSATIDAEKFSAYFDEAPVFYVPGRRYPVDIYYTPQPEANYIQA 613
Query: 246 AIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTE 305
AI T LQIH +P GDILVFLTGQDEIE E +++ R LG +I E+I+CPIYANLP+E
Sbjct: 614 AITTILQIHTTQPAGDILVFLTGQDEIELMSENMQELCRILGKRIPEIILCPIYANLPSE 673
Query: 306 LQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPI 365
LQAKIF+PTP ARKVVLATNIAETS+TIDG+ +VI GF K YNP+TGMESL+ P
Sbjct: 674 LQAKIFDPTPPGARKVVLATNIAETSITIDGVNFVIDSGFVKQNMYNPRTGMESLVSVPC 733
Query: 366 SKASANQRTGLSERTGPGKCFRLYTLHNYHRIWMTILC---QKYN--ELIWKMLSLFSNV 420
S+ASA+QR G + R GPGKCFRLYT Y+ + Q+ N ++ + SL N
Sbjct: 734 SRASADQRAGRAGRVGPGKCFRLYTRRTYNNELDMVTSPEIQRTNLTNIVLLLKSLGINN 793
Query: 421 LVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKY 480
L++FDF+D P GALN G+LT++GRQMAEFP DP LSK++++ KY
Sbjct: 794 LLDFDFMDAPPPETLMRSLELLYALGALNNRGELTKLGRQMAEFPTDPMLSKSLIASSKY 853
Query: 481 KCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNY 540
C +E+++I +ML +S+FYRPKDK + AD AR NF GD + LL ++N W + ++
Sbjct: 854 GCVEEVLSIVSMLGEASSLFYRPKDKIMEADKARANFTQPG-GDHLTLLHIWNEWVDTDF 912
Query: 541 STEWCRENYIQVSSMKRARDIRDQLEGLFARVEID 575
S W REN++Q S+ RARD+RDQL L RVEI+
Sbjct: 913 SYNWARENFLQYKSLCRARDVRDQLANLCERVEIE 947
Score = 38 (18.4 bits), Expect = 2.3e-157, Sum P(2) = 2.3e-157
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 21 DKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQE 59
+K D +E + D +EFE L K + +T E +++
Sbjct: 168 EKSSDPETERLNDLREREEFEERLRRKDLEAATNEFVED 206
>UNIPROTKB|G4N1N4 [details] [associations]
symbol:MGG_07501 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12813 RefSeq:XP_003711413.1
EnsemblFungi:MGG_07501T0 GeneID:2683421 KEGG:mgr:MGG_07501
Uniprot:G4N1N4
Length = 1016
Score = 1525 (541.9 bits), Expect = 1.8e-156, P = 1.8e-156
Identities = 309/546 (56%), Positives = 390/546 (71%)
Query: 51 KSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------- 103
K L M QE RK+LPIY + +E L A+ Y +L IVGETGSGKTTQ+PQYL+E
Sbjct: 361 KRQLSM-QETRKSLPIYVYRDEFLAALEQYQILVIVGETGSGKTTQLPQYLHEAGYTKDG 419
Query: 104 -------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREI 156
PR VAAMSVAARV+ EMGVK+G+EVGYSIRFED TSDKT+LKYMTD MLLRE
Sbjct: 420 MRVGCTQPRRVAAMSVAARVADEMGVKVGNEVGYSIRFEDNTSDKTILKYMTDGMLLREF 479
Query: 157 VIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFG 216
+ EP L SYS L++DEA ERT+ TD L L+KDL R DLKLLISSAT++AEKF+ YF
Sbjct: 480 MTEPDLSSYSALMIDEAHERTVHTDILLALVKDLARERKDLKLLISSATMNAEKFASYFD 539
Query: 217 SAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAE 276
APIF IPGRRYPV+++YT APE +Y+ AAI T QIH +P GDIL+FLTGQDEIE AE
Sbjct: 540 DAPIFNIPGRRYPVDIYYTPAPEANYLSAAITTVFQIHTTQPKGDILIFLTGQDEIEAAE 599
Query: 277 EILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDG 336
+ + R LG+++ EL+ICPIYANLP+ELQ+KIFEPTPE ARKVVLATNIAETSLTIDG
Sbjct: 600 MQITETARKLGSRVKELVICPIYANLPSELQSKIFEPTPENARKVVLATNIAETSLTIDG 659
Query: 337 IKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHR 396
I YVI PG+ K YNP TGM +L+V P S+ASANQR+G + R GPGKCFRLYT + Y
Sbjct: 660 IVYVIDPGYVKENVYNPATGMSNLVVVPCSRASANQRSGRAGRVGPGKCFRLYTKYAYMN 719
Query: 397 IW---MTILCQK--YNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKA 451
T Q+ N ++ ++ SL N L++F+F+DPP LN
Sbjct: 720 EMEESTTPEIQRTNLNGVVLQLKSLGINELLDFEFMDPPPTEALIGALNQLFALQGLNHK 779
Query: 452 GQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYAD 511
G+LT++GRQMAEFP DP L+K +++ DK C +E+++I AML +++F+RPKDKQ++AD
Sbjct: 780 GELTKLGRQMAEFPTDPMLAKAVLAADKEGCVEEVLSIVAMLSEASALFFRPKDKQVHAD 839
Query: 512 NARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFAR 571
AR F + + GD + LL ++N W + +YS W +EN++Q S+ RARD+R+QL L R
Sbjct: 840 AARGRFTVKEGGDHVTLLNIWNQWLDSDYSPIWSKENFLQQRSLTRARDVREQLSKLCER 899
Query: 572 VEIDTS 577
VE+ S
Sbjct: 900 VEVTLS 905
>DICTYBASE|DDB_G0291183 [details] [associations]
symbol:dhx8 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0006396 "RNA processing" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=IEA;ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0291183 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GenomeReviews:CM000154_GR GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AAFI02000175
InterPro:IPR022967 SMART:SM00316 KO:K12818 OMA:NAWCYEN
RefSeq:XP_635385.1 HSSP:P05055 ProteinModelPortal:Q54F05
EnsemblProtists:DDB0233399 GeneID:8628033 KEGG:ddi:DDB_G0291183
ProtClustDB:CLSZ2846610 Uniprot:Q54F05
Length = 1160
Score = 1431 (508.8 bits), Expect = 1.7e-146, P = 1.7e-146
Identities = 283/543 (52%), Positives = 390/543 (71%)
Query: 51 KSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------- 103
K+T ++E+R++LPI+P E LQAVS + +L ++GETGSGKTTQ+ QYL E
Sbjct: 495 KATSRSIKEQRESLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEAGYGTRG 554
Query: 104 ------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIV 157
PR VAAMSV+ RV++E G +LG EVGY+IRFEDCTS +T++K+MTD +LLRE +
Sbjct: 555 KIGCTQPRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLRECL 614
Query: 158 IEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGS 217
++P+L +YSV+I+DEA ERT+STD LFGLLK + RP+LK+LI+SATL+AEKFS YF +
Sbjct: 615 LDPNLSAYSVIILDEAHERTISTDVLFGLLKQALQRRPELKVLITSATLEAEKFSKYFMN 674
Query: 218 APIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEE 277
A +F IPGR +PV++ YTK PE DY++A+++T +QIH++EP GDIL+FLTGQ+EI+ A +
Sbjct: 675 AQLFIIPGRTFPVDIRYTKDPEADYLDASLITVMQIHLSEPPGDILLFLTGQEEIDAACQ 734
Query: 278 ILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGI 337
IL +R + LG+ + +LII P+Y+ LP+E+Q KIFEP P +RKVV+ATNIAETSLTIDGI
Sbjct: 735 ILYERMKSLGSNVPDLIILPVYSALPSEMQTKIFEPAPPGSRKVVIATNIAETSLTIDGI 794
Query: 338 KYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRI 397
YVI PGF+K K +NPK GM+SL+V PIS+A+A QR+G + RTGPGKC+RLYT +
Sbjct: 795 YYVIDPGFSKQKCFNPKNGMDSLVVAPISQAAARQRSGRAGRTGPGKCYRLYTESAFKNE 854
Query: 398 WMTILC---QKYN--ELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAG 452
+ Q+ N + M ++ N L+NFDF+DPP GAL++ G
Sbjct: 855 MLASSIPEIQRTNLGNTVLTMKAMGINDLLNFDFMDPPPVQTLVSAMEQLYSLGALDEEG 914
Query: 453 QLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADN 512
LTR+GR+MAEFP+DP+LSK +++ CSDEI+T+ AML V N +FYRPK+KQ AD
Sbjct: 915 LLTRLGRKMAEFPLDPQLSKMLIASVDLGCSDEILTVVAMLSVQN-VFYRPKEKQALADQ 973
Query: 513 ARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARV 572
+ F + GD + LL VY W+ +S WC EN++Q S++RA+D+R QL + R
Sbjct: 974 KKAKFFQPE-GDHLTLLNVYESWKNSKFSNPWCFENFVQARSLRRAQDVRKQLITIMDRY 1032
Query: 573 EID 575
++D
Sbjct: 1033 KLD 1035
>UNIPROTKB|F5H658 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
HGNC:HGNC:2749 EMBL:AC068675 EMBL:AC087650 IPI:IPI01010550
ProteinModelPortal:F5H658 SMR:F5H658 Ensembl:ENST00000540306
UCSC:uc010wig.2 ArrayExpress:F5H658 Bgee:F5H658 Uniprot:F5H658
Length = 1181
Score = 1418 (504.2 bits), Expect = 4.0e-145, P = 4.0e-145
Identities = 293/550 (53%), Positives = 379/550 (68%)
Query: 46 NK-SVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE- 103
NK S K T + E+R++LPIY E+L+QAV +L ++GETGSGKTTQI QYL E
Sbjct: 546 NKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEA 605
Query: 104 ------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCM 151
PR VAAMSVA RVS+E G LG EVGY+IRFEDCTS +TV+KYMTD M
Sbjct: 606 GYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGM 665
Query: 152 LLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKF 211
LLRE +I+P L Y+++++DEA ERT+ TD LFGLLK + R D+KL+++SATLDA KF
Sbjct: 666 LLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKF 725
Query: 212 SDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDE 271
S YF APIF IPGR YPVE+ YTK PE DY++A+++T +QIH+ EP GDILVFLTGQ+E
Sbjct: 726 SQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEE 785
Query: 272 IERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETS 331
I+ A EIL +R + LG + ELII P+Y+ LP+E+Q +IF+P P +RKVV+ATNIAETS
Sbjct: 786 IDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETS 845
Query: 332 LTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTL 391
LTIDGI YV+ PGF K K YN KTG++ L+V PIS+A A QR G + RTGPGKC+RLYT
Sbjct: 846 LTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE 905
Query: 392 HNYHRIWMTILC---QKYNELIWKMLSLFS---NVLVNFDFIDPPXXXXXXXXXXXXXXX 445
Y +T Q+ N L +LSL + N L++FDF+D P
Sbjct: 906 RAYRDEMLTTNVPEIQRTN-LASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTL 964
Query: 446 GALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKD 505
GAL+ G LTR+GR+MAEFP++P L K ++ CS+E++TI +ML V N +FYRPKD
Sbjct: 965 GALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKD 1023
Query: 506 KQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQL 565
KQ AD + FH + GD + LL VYN W+ +S WC EN+IQ S++RA+DIR Q+
Sbjct: 1024 KQALADQKKAKFHQTE-GDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQM 1082
Query: 566 EGLFARVEID 575
G+ R ++D
Sbjct: 1083 LGIMDRHKLD 1092
>UNIPROTKB|Q14562 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0006396 "RNA
processing" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 EMBL:D50487 GO:GO:0005524 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 KO:K12818 OMA:NAWCYEN IPI:IPI00031508 PIR:A56236
RefSeq:NP_004932.1 UniGene:Hs.463105 PDB:2EQS PDB:3I4U PDBsum:2EQS
PDBsum:3I4U ProteinModelPortal:Q14562 SMR:Q14562 IntAct:Q14562
STRING:Q14562 PhosphoSite:Q14562 DMDM:3023637 PaxDb:Q14562
PeptideAtlas:Q14562 PRIDE:Q14562 Ensembl:ENST00000262415
GeneID:1659 KEGG:hsa:1659 UCSC:uc002idu.1 CTD:1659
GeneCards:GC17P041572 HGNC:HGNC:2749 HPA:HPA049285 MIM:600396
neXtProt:NX_Q14562 PharmGKB:PA27231 InParanoid:Q14562
OrthoDB:EOG4D26P2 PhylomeDB:Q14562 EvolutionaryTrace:Q14562
GenomeRNAi:1659 NextBio:6828 ArrayExpress:Q14562 Bgee:Q14562
CleanEx:HS_DHX8 Genevestigator:Q14562 GermOnline:ENSG00000067596
Uniprot:Q14562
Length = 1220
Score = 1418 (504.2 bits), Expect = 4.0e-145, P = 4.0e-145
Identities = 293/550 (53%), Positives = 379/550 (68%)
Query: 46 NK-SVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE- 103
NK S K T + E+R++LPIY E+L+QAV +L ++GETGSGKTTQI QYL E
Sbjct: 546 NKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEA 605
Query: 104 ------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCM 151
PR VAAMSVA RVS+E G LG EVGY+IRFEDCTS +TV+KYMTD M
Sbjct: 606 GYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGM 665
Query: 152 LLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKF 211
LLRE +I+P L Y+++++DEA ERT+ TD LFGLLK + R D+KL+++SATLDA KF
Sbjct: 666 LLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKF 725
Query: 212 SDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDE 271
S YF APIF IPGR YPVE+ YTK PE DY++A+++T +QIH+ EP GDILVFLTGQ+E
Sbjct: 726 SQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEE 785
Query: 272 IERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETS 331
I+ A EIL +R + LG + ELII P+Y+ LP+E+Q +IF+P P +RKVV+ATNIAETS
Sbjct: 786 IDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETS 845
Query: 332 LTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTL 391
LTIDGI YV+ PGF K K YN KTG++ L+V PIS+A A QR G + RTGPGKC+RLYT
Sbjct: 846 LTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE 905
Query: 392 HNYHRIWMTILC---QKYNELIWKMLSLFS---NVLVNFDFIDPPXXXXXXXXXXXXXXX 445
Y +T Q+ N L +LSL + N L++FDF+D P
Sbjct: 906 RAYRDEMLTTNVPEIQRTN-LASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTL 964
Query: 446 GALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKD 505
GAL+ G LTR+GR+MAEFP++P L K ++ CS+E++TI +ML V N +FYRPKD
Sbjct: 965 GALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKD 1023
Query: 506 KQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQL 565
KQ AD + FH + GD + LL VYN W+ +S WC EN+IQ S++RA+DIR Q+
Sbjct: 1024 KQALADQKKAKFHQTE-GDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQM 1082
Query: 566 EGLFARVEID 575
G+ R ++D
Sbjct: 1083 LGIMDRHKLD 1092
>MGI|MGI:1306823 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1306823 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL590994 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR022967 SMART:SM00316 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
OrthoDB:EOG4D26P2 EMBL:BC132445 EMBL:AL591436 IPI:IPI00461304
RefSeq:NP_659080.2 UniGene:Mm.28186 ProteinModelPortal:A2A4P0
SMR:A2A4P0 PaxDb:A2A4P0 PRIDE:A2A4P0 DNASU:217207
Ensembl:ENSMUST00000039152 GeneID:217207 KEGG:mmu:217207
UCSC:uc007lpr.1 InParanoid:A2A4P0 NextBio:375641 Bgee:A2A4P0
Genevestigator:A2A4P0 Uniprot:A2A4P0
Length = 1244
Score = 1418 (504.2 bits), Expect = 4.0e-145, P = 4.0e-145
Identities = 293/550 (53%), Positives = 379/550 (68%)
Query: 46 NK-SVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE- 103
NK S K T + E+R++LPIY E+L+QAV +L ++GETGSGKTTQI QYL E
Sbjct: 570 NKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEA 629
Query: 104 ------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCM 151
PR VAAMSVA RVS+E G LG EVGY+IRFEDCTS +TV+KYMTD M
Sbjct: 630 GYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGM 689
Query: 152 LLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKF 211
LLRE +I+P L Y+++++DEA ERT+ TD LFGLLK + R D+KL+++SATLDA KF
Sbjct: 690 LLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKF 749
Query: 212 SDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDE 271
S YF APIF IPGR YPVE+ YTK PE DY++A+++T +QIH+ EP GDILVFLTGQ+E
Sbjct: 750 SQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEE 809
Query: 272 IERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETS 331
I+ A EIL +R + LG + ELII P+Y+ LP+E+Q +IF+P P +RKVV+ATNIAETS
Sbjct: 810 IDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETS 869
Query: 332 LTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTL 391
LTIDGI YV+ PGF K K YN KTG++ L+V PIS+A A QR G + RTGPGKC+RLYT
Sbjct: 870 LTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE 929
Query: 392 HNYHRIWMTILC---QKYNELIWKMLSLFS---NVLVNFDFIDPPXXXXXXXXXXXXXXX 445
Y +T Q+ N L +LSL + N L++FDF+D P
Sbjct: 930 RAYRDEMLTTNVPEIQRTN-LASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTL 988
Query: 446 GALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKD 505
GAL+ G LTR+GR+MAEFP++P L K ++ CS+E++TI +ML V N +FYRPKD
Sbjct: 989 GALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKD 1047
Query: 506 KQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQL 565
KQ AD + FH + GD + LL VYN W+ +S WC EN+IQ S++RA+DIR Q+
Sbjct: 1048 KQALADQKKAKFHQTE-GDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQM 1106
Query: 566 EGLFARVEID 575
G+ R ++D
Sbjct: 1107 LGIMDRHKLD 1116
>RGD|1310723 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310723
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241 KO:K12818 CTD:1659
OrthoDB:EOG4D26P2 UniGene:Rn.108087 EMBL:AY383690 IPI:IPI00370026
RefSeq:NP_001041309.1 SMR:Q6TXG4 Ensembl:ENSRNOT00000048140
GeneID:287727 KEGG:rno:287727 UCSC:RGD:1310723 NextBio:626887
Genevestigator:Q6TXG4 Uniprot:Q6TXG4
Length = 1210
Score = 1418 (504.2 bits), Expect = 4.0e-145, P = 4.0e-145
Identities = 293/550 (53%), Positives = 379/550 (68%)
Query: 46 NK-SVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE- 103
NK S K T + E+R++LPIY E+L+QAV +L ++GETGSGKTTQI QYL E
Sbjct: 515 NKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEA 574
Query: 104 ------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCM 151
PR VAAMSVA RVS+E G LG EVGY+IRFEDCTS +TV+KYMTD M
Sbjct: 575 GYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGM 634
Query: 152 LLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKF 211
LLRE +I+P L Y+++++DEA ERT+ TD LFGLLK + R D+KL+++SATLDA KF
Sbjct: 635 LLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKF 694
Query: 212 SDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDE 271
S YF APIF IPGR YPVE+ YTK PE DY++A+++T +QIH+ EP GDILVFLTGQ+E
Sbjct: 695 SQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEE 754
Query: 272 IERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETS 331
I+ A EIL +R + LG + ELII P+Y+ LP+E+Q +IF+P P +RKVV+ATNIAETS
Sbjct: 755 IDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETS 814
Query: 332 LTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTL 391
LTIDGI YV+ PGF K K YN KTG++ L+V PIS+A A QR G + RTGPGKC+RLYT
Sbjct: 815 LTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE 874
Query: 392 HNYHRIWMTILC---QKYNELIWKMLSLFS---NVLVNFDFIDPPXXXXXXXXXXXXXXX 445
Y +T Q+ N L +LSL + N L++FDF+D P
Sbjct: 875 RAYRDEMLTTNVPEIQRTN-LASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTL 933
Query: 446 GALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKD 505
GAL+ G LTR+GR+MAEFP++P L K ++ CS+E++TI +ML V N +FYRPKD
Sbjct: 934 GALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKD 992
Query: 506 KQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQL 565
KQ AD + FH + GD + LL VYN W+ +S WC EN+IQ S++RA+DIR Q+
Sbjct: 993 KQALADQKKAKFHQTE-GDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQM 1051
Query: 566 EGLFARVEID 575
G+ R ++D
Sbjct: 1052 LGIMDRHKLD 1061
>UNIPROTKB|D4A805 [details] [associations]
symbol:Dhx8 "Protein Dhx8" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1310723 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH473948 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
OMA:NAWCYEN IPI:IPI00567810 UniGene:Rn.108087
Ensembl:ENSRNOT00000028198 Uniprot:D4A805
Length = 1242
Score = 1418 (504.2 bits), Expect = 4.0e-145, P = 4.0e-145
Identities = 293/550 (53%), Positives = 379/550 (68%)
Query: 46 NK-SVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE- 103
NK S K T + E+R++LPIY E+L+QAV +L ++GETGSGKTTQI QYL E
Sbjct: 568 NKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEA 627
Query: 104 ------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCM 151
PR VAAMSVA RVS+E G LG EVGY+IRFEDCTS +TV+KYMTD M
Sbjct: 628 GYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGM 687
Query: 152 LLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKF 211
LLRE +I+P L Y+++++DEA ERT+ TD LFGLLK + R D+KL+++SATLDA KF
Sbjct: 688 LLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKF 747
Query: 212 SDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDE 271
S YF APIF IPGR YPVE+ YTK PE DY++A+++T +QIH+ EP GDILVFLTGQ+E
Sbjct: 748 SQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEE 807
Query: 272 IERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETS 331
I+ A EIL +R + LG + ELII P+Y+ LP+E+Q +IF+P P +RKVV+ATNIAETS
Sbjct: 808 IDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETS 867
Query: 332 LTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTL 391
LTIDGI YV+ PGF K K YN KTG++ L+V PIS+A A QR G + RTGPGKC+RLYT
Sbjct: 868 LTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE 927
Query: 392 HNYHRIWMTILC---QKYNELIWKMLSLFS---NVLVNFDFIDPPXXXXXXXXXXXXXXX 445
Y +T Q+ N L +LSL + N L++FDF+D P
Sbjct: 928 RAYRDEMLTTNVPEIQRTN-LASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTL 986
Query: 446 GALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKD 505
GAL+ G LTR+GR+MAEFP++P L K ++ CS+E++TI +ML V N +FYRPKD
Sbjct: 987 GALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKD 1045
Query: 506 KQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQL 565
KQ AD + FH + GD + LL VYN W+ +S WC EN+IQ S++RA+DIR Q+
Sbjct: 1046 KQALADQKKAKFHQTE-GDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQM 1104
Query: 566 EGLFARVEID 575
G+ R ++D
Sbjct: 1105 LGIMDRHKLD 1114
>UNIPROTKB|F1MEM4 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
OMA:NAWCYEN EMBL:DAAA02049231 EMBL:DAAA02049230 IPI:IPI00695401
Ensembl:ENSBTAT00000010976 Uniprot:F1MEM4
Length = 1230
Score = 1417 (503.9 bits), Expect = 5.1e-145, P = 5.1e-145
Identities = 293/550 (53%), Positives = 379/550 (68%)
Query: 46 NK-SVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE- 103
NK S K T + E+R++LPIY E+L+QAV +L ++GETGSGKTTQI QYL E
Sbjct: 556 NKASYGKKTQMSIIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEA 615
Query: 104 ------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCM 151
PR VAAMSVA RVS+E G LG EVGY+IRFEDCTS +TV+KYMTD M
Sbjct: 616 GYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGM 675
Query: 152 LLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKF 211
LLRE +I+P L Y+++++DEA ERT+ TD LFGLLK + R D+KL+++SATLDA KF
Sbjct: 676 LLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKF 735
Query: 212 SDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDE 271
S YF APIF IPGR YPVE+ YTK PE DY++A+++T +QIH+ EP GDILVFLTGQ+E
Sbjct: 736 SQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEE 795
Query: 272 IERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETS 331
I+ A EIL +R + LG + ELII P+Y+ LP+E+Q +IF+P P +RKVV+ATNIAETS
Sbjct: 796 IDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETS 855
Query: 332 LTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTL 391
LTIDGI YV+ PGF K K YN KTG++ L+V PIS+A A QR G + RTGPGKC+RLYT
Sbjct: 856 LTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE 915
Query: 392 HNYHRIWMTILC---QKYNELIWKMLSLFS---NVLVNFDFIDPPXXXXXXXXXXXXXXX 445
Y +T Q+ N L +LSL + N L++FDF+D P
Sbjct: 916 RAYRDEMLTTNVPEIQRTN-LASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTL 974
Query: 446 GALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKD 505
GAL+ G LTR+GR+MAEFP++P L K ++ CS+E++TI +ML V N +FYRPKD
Sbjct: 975 GALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKD 1033
Query: 506 KQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQL 565
KQ AD + FH + GD + LL VYN W+ +S WC EN+IQ S++RA+DIR Q+
Sbjct: 1034 KQALADQKKAKFHQTE-GDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQM 1092
Query: 566 EGLFARVEID 575
G+ R ++D
Sbjct: 1093 LGIMDRHKLD 1102
>UNIPROTKB|E2R9R9 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:AAEX03006434 EMBL:AAEX03006433
RefSeq:XP_537627.2 ProteinModelPortal:E2R9R9
Ensembl:ENSCAFT00000023129 GeneID:480507 KEGG:cfa:480507
Uniprot:E2R9R9
Length = 1216
Score = 1417 (503.9 bits), Expect = 5.1e-145, P = 5.1e-145
Identities = 293/550 (53%), Positives = 379/550 (68%)
Query: 46 NK-SVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE- 103
NK S K T + E+R++LPIY E+L+QAV +L ++GETGSGKTTQI QYL E
Sbjct: 542 NKASYGKKTQMSIIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEA 601
Query: 104 ------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCM 151
PR VAAMSVA RVS+E G LG EVGY+IRFEDCTS +TV+KYMTD M
Sbjct: 602 GYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGM 661
Query: 152 LLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKF 211
LLRE +I+P L Y+++++DEA ERT+ TD LFGLLK + R D+KL+++SATLDA KF
Sbjct: 662 LLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKF 721
Query: 212 SDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDE 271
S YF APIF IPGR YPVE+ YTK PE DY++A+++T +QIH+ EP GDILVFLTGQ+E
Sbjct: 722 SQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEE 781
Query: 272 IERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETS 331
I+ A EIL +R + LG + ELII P+Y+ LP+E+Q +IF+P P +RKVV+ATNIAETS
Sbjct: 782 IDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETS 841
Query: 332 LTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTL 391
LTIDGI YV+ PGF K K YN KTG++ L+V PIS+A A QR G + RTGPGKC+RLYT
Sbjct: 842 LTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE 901
Query: 392 HNYHRIWMTILC---QKYNELIWKMLSLFS---NVLVNFDFIDPPXXXXXXXXXXXXXXX 445
Y +T Q+ N L +LSL + N L++FDF+D P
Sbjct: 902 RAYRDEMLTTNVPEIQRTN-LASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTL 960
Query: 446 GALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKD 505
GAL+ G LTR+GR+MAEFP++P L K ++ CS+E++TI +ML V N +FYRPKD
Sbjct: 961 GALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKD 1019
Query: 506 KQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQL 565
KQ AD + FH + GD + LL VYN W+ +S WC EN+IQ S++RA+DIR Q+
Sbjct: 1020 KQALADQKKAKFHQTE-GDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQM 1078
Query: 566 EGLFARVEID 575
G+ R ++D
Sbjct: 1079 LGIMDRHKLD 1088
>UNIPROTKB|F1S1H3 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:FP102477 RefSeq:XP_003131427.2
Ensembl:ENSSSCT00000018917 GeneID:100517118 KEGG:ssc:100517118
Uniprot:F1S1H3
Length = 1212
Score = 1417 (503.9 bits), Expect = 5.1e-145, P = 5.1e-145
Identities = 293/550 (53%), Positives = 379/550 (68%)
Query: 46 NK-SVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE- 103
NK S K T + E+R++LPIY E+L+QAV +L ++GETGSGKTTQI QYL E
Sbjct: 538 NKASYGKKTQMSIIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEA 597
Query: 104 ------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCM 151
PR VAAMSVA RVS+E G LG EVGY+IRFEDCTS +TV+KYMTD M
Sbjct: 598 GYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGM 657
Query: 152 LLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKF 211
LLRE +I+P L Y+++++DEA ERT+ TD LFGLLK + R D+KL+++SATLDA KF
Sbjct: 658 LLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKF 717
Query: 212 SDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDE 271
S YF APIF IPGR YPVE+ YTK PE DY++A+++T +QIH+ EP GDILVFLTGQ+E
Sbjct: 718 SQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEE 777
Query: 272 IERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETS 331
I+ A EIL +R + LG + ELII P+Y+ LP+E+Q +IF+P P +RKVV+ATNIAETS
Sbjct: 778 IDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETS 837
Query: 332 LTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTL 391
LTIDGI YV+ PGF K K YN KTG++ L+V PIS+A A QR G + RTGPGKC+RLYT
Sbjct: 838 LTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE 897
Query: 392 HNYHRIWMTILC---QKYNELIWKMLSLFS---NVLVNFDFIDPPXXXXXXXXXXXXXXX 445
Y +T Q+ N L +LSL + N L++FDF+D P
Sbjct: 898 RAYRDEMLTTNVPEIQRTN-LASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTL 956
Query: 446 GALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKD 505
GAL+ G LTR+GR+MAEFP++P L K ++ CS+E++TI +ML V N +FYRPKD
Sbjct: 957 GALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKD 1015
Query: 506 KQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQL 565
KQ AD + FH + GD + LL VYN W+ +S WC EN+IQ S++RA+DIR Q+
Sbjct: 1016 KQALADQKKAKFHQTE-GDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQM 1074
Query: 566 EGLFARVEID 575
G+ R ++D
Sbjct: 1075 LGIMDRHKLD 1084
>ZFIN|ZDB-GENE-050809-39 [details] [associations]
symbol:dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide
8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070054 "mRNA splicing, via endonucleolytic
cleavage and ligation" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-050809-39 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
GO:GO:0060215 InterPro:IPR013957 Pfam:PF08648 EMBL:AL833789
IPI:IPI00498887 RefSeq:XP_002663993.1 UniGene:Dr.159472
ProteinModelPortal:E7F7E3 Ensembl:ENSDART00000066282 GeneID:606595
KEGG:dre:606595 NextBio:20892459 Bgee:E7F7E3 GO:GO:0070054
Uniprot:E7F7E3
Length = 1210
Score = 1415 (503.2 bits), Expect = 8.4e-145, P = 8.4e-145
Identities = 293/550 (53%), Positives = 379/550 (68%)
Query: 46 NK-SVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE- 103
NK S K T + E+R++LPIY E+L+QAV +L ++GETGSGKTTQI QYL E
Sbjct: 536 NKASYGKKTQLSILEQRESLPIYKLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEA 595
Query: 104 ------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCM 151
PR VAAMSVA RVS+E G LG EVGY+IRFEDCTS +TV+KYMTD M
Sbjct: 596 GYTTRGKIGCTQPRRVAAMSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMTDGM 655
Query: 152 LLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKF 211
LLRE +I+P L Y+++++DEA ERT+ TD LFGLLK + R D+KL+++SATLDA KF
Sbjct: 656 LLRECLIDPDLGQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRTDMKLIVTSATLDAVKF 715
Query: 212 SDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDE 271
S YF APIF IPGR YPVE+ YTK PE DY++A+++T +QIH+ EP GDILVFLTGQ+E
Sbjct: 716 SQYFYEAPIFTIPGRTYPVEVLYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEE 775
Query: 272 IERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETS 331
I+ A EIL +R + LG + ELII P+Y+ LP+E+Q +IF+P P +RKVV+ATNIAETS
Sbjct: 776 IDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETS 835
Query: 332 LTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTL 391
LTIDGI YV+ PGF K K YN KTG++ L+V PIS+A A QR G + RTGPGKC+RLYT
Sbjct: 836 LTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE 895
Query: 392 HNYHRIWMTILC---QKYNELIWKMLSLFS---NVLVNFDFIDPPXXXXXXXXXXXXXXX 445
Y +T Q+ N L +LSL + N L++FDF+D P
Sbjct: 896 RAYRDEMLTTNVPEIQRTN-LASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTL 954
Query: 446 GALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKD 505
GAL+ G LTR+GR+MAEFP++P L K ++ CS+E++TI +ML V N +FYRPKD
Sbjct: 955 GALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKD 1013
Query: 506 KQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQL 565
KQ AD + FH + GD + LL VYN W+ +S WC EN+IQ S++RA+DIR Q+
Sbjct: 1014 KQALADQKKAKFHQPE-GDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQM 1072
Query: 566 EGLFARVEID 575
G+ R ++D
Sbjct: 1073 LGIMDRHKLD 1082
>UNIPROTKB|F1P306 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967
SMART:SM00316 GeneTree:ENSGT00700000104241 EMBL:AADN02070153
EMBL:AADN02070154 IPI:IPI00591627 Ensembl:ENSGALT00000001801
OMA:AMANTAM Uniprot:F1P306
Length = 1168
Score = 1412 (502.1 bits), Expect = 1.7e-144, P = 1.7e-144
Identities = 292/550 (53%), Positives = 379/550 (68%)
Query: 46 NK-SVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE- 103
NK S K T + E+R++LPI+ E+L+QAV +L ++GETGSGKTTQI QYL E
Sbjct: 494 NKASYGKKTQLSIIEQRESLPIFRLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEA 553
Query: 104 ------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCM 151
PR VAAMSVA RVS+E G LG EVGY+IRFEDCTS +TV+KYMTD M
Sbjct: 554 GYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGM 613
Query: 152 LLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKF 211
LLRE +I+P L Y+++++DEA ERT+ TD LFGLLK + R D+KL+++SATLDA KF
Sbjct: 614 LLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKF 673
Query: 212 SDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDE 271
S YF APIF IPGR YPVE+ YTK PE DY++A+++T +QIH+ EP GDILVFLTGQ+E
Sbjct: 674 SQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEE 733
Query: 272 IERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETS 331
I+ A EIL +R + LG + ELII P+Y+ LP+E+Q +IF+P P +RKVV+ATNIAETS
Sbjct: 734 IDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETS 793
Query: 332 LTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTL 391
LTIDGI YV+ PGF K K YN KTG++ L+V PIS+A A QR G + RTGPGKC+RLYT
Sbjct: 794 LTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE 853
Query: 392 HNYHRIWMTILC---QKYNELIWKMLSLFS---NVLVNFDFIDPPXXXXXXXXXXXXXXX 445
Y +T Q+ N L +LSL + N L++FDF+D P
Sbjct: 854 RAYRDEMLTTNVPEIQRTN-LASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTL 912
Query: 446 GALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKD 505
GAL+ G LTR+GR+MAEFP++P L K ++ CS+E++TI +ML V N +FYRPKD
Sbjct: 913 GALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKD 971
Query: 506 KQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQL 565
KQ AD + FH + GD + LL VYN W+ +S WC EN+IQ S++RA+DIR Q+
Sbjct: 972 KQALADQKKAKFHQTE-GDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQM 1030
Query: 566 EGLFARVEID 575
G+ R ++D
Sbjct: 1031 LGIMDRHKLD 1040
>UNIPROTKB|G4NFJ0 [details] [associations]
symbol:MGG_08807 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:CM001236 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 KO:K12818 RefSeq:XP_003719164.1
ProteinModelPortal:G4NFJ0 EnsemblFungi:MGG_08807T0 GeneID:2678973
KEGG:mgr:MGG_08807 Uniprot:G4NFJ0
Length = 1207
Score = 1410 (501.4 bits), Expect = 2.8e-144, P = 2.8e-144
Identities = 280/544 (51%), Positives = 382/544 (70%)
Query: 46 NKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE-- 103
N+S K T ++++R++LP++ F E+L++AV ++ +VGETGSGKTTQ+ QYL E
Sbjct: 524 NQSFGKRTNMTIKQQRESLPVFAFREQLIKAVKENQIMIVVGETGSGKTTQLTQYLAEAG 583
Query: 104 -----------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCML 152
PR VAAMSVA RVS+E+G +LG EVGY+IRFEDCTS T +KYMTD ML
Sbjct: 584 FANEGVIGCTQPRRVAAMSVAKRVSEEVGCELGQEVGYTIRFEDCTSPATRIKYMTDGML 643
Query: 153 LREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFS 212
REIVI+P L+ YSV+++DEA ERT++TD LF LLK RPDLK++++SATLDA+KFS
Sbjct: 644 QREIVIDPDLKRYSVIMLDEAHERTIATDVLFALLKKATRRRPDLKIIVTSATLDADKFS 703
Query: 213 DYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEI 272
YF PIF IPGR +PVE+ Y+K PE DY++AA+ T +QIH++EP GDIL+FLTGQ+EI
Sbjct: 704 AYFNECPIFTIPGRTFPVEILYSKDPESDYLDAALTTVMQIHIDEPPGDILLFLTGQEEI 763
Query: 273 ERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSL 332
+ + EIL +R + LG + ELII P+Y+ LP E+Q++IF+P P +RKVV+ATNIAETS+
Sbjct: 764 DTSCEILFERMKALGPSVPELIILPVYSALPNEMQSRIFDPAPPGSRKVVIATNIAETSI 823
Query: 333 TIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLH 392
TID I YV+ PGF K +Y+PK GM+SL+V PIS+A ANQR G + RTGPGKCFRLYT
Sbjct: 824 TIDHIYYVVDPGFVKQNAYDPKLGMDSLVVTPISQAQANQRAGRAGRTGPGKCFRLYTEA 883
Query: 393 NYHRIWMT-----ILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGA 447
Y + I Q + I + ++ N L++FDF+DPP A
Sbjct: 884 AYQTEMLPTSIPEIQRQNLSNTILLLKAMGINDLLHFDFMDPPPINTMLTALEELYALSA 943
Query: 448 LNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQ 507
L+ G LTR+GR+MA+FP++P LSK +++ + +CSDE+++I AML + N +FYRPK+KQ
Sbjct: 944 LDDEGLLTRLGRKMADFPMEPSLSKVLIASVEMRCSDEMLSIVAMLNLPN-VFYRPKEKQ 1002
Query: 508 IYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEG 567
AD + FH + GD + LL VYN W++ YS WC EN+IQ ++ RARD+R+Q+E
Sbjct: 1003 TQADAKKAKFHDPN-GDHLTLLNVYNAWKQSRYSKPWCAENFIQFRALTRARDVRNQIER 1061
Query: 568 LFAR 571
+ R
Sbjct: 1062 IMQR 1065
>FB|FBgn0086895 [details] [associations]
symbol:pea "peanuts" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0007286 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0000381 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN EMBL:BT044222
RefSeq:NP_610928.1 UniGene:Dm.12451 SMR:A1Z9L3 STRING:A1Z9L3
EnsemblMetazoa:FBtr0087518 GeneID:36561 KEGG:dme:Dmel_CG8241
UCSC:CG8241-RA CTD:36561 FlyBase:FBgn0086895 InParanoid:A1Z9L3
OrthoDB:EOG437PVS GenomeRNAi:36561 NextBio:799212 Uniprot:A1Z9L3
Length = 1242
Score = 1407 (500.3 bits), Expect = 5.9e-144, P = 5.9e-144
Identities = 284/543 (52%), Positives = 383/543 (70%)
Query: 51 KSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------- 103
K T L E+R++LPIY ++L++AV+ +L ++GETGSGKTTQI QYL E
Sbjct: 573 KKTDLTLVEQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGFTARG 632
Query: 104 ------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIV 157
PR VAAMSVA RV++E G +LG EVGY+IRFEDCTS +T++KYMTD MLLRE +
Sbjct: 633 KIGCTQPRRVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECL 692
Query: 158 IEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGS 217
+E L+SYSV+++DEA ERT+ TD LFGLLK + RP+LKL+++SATLDA KFS YF
Sbjct: 693 MEAELKSYSVIMLDEAHERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFFK 752
Query: 218 APIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEE 277
APIF IPGR +PVE+ YTK PE DY++A+++T +QIH+ EP GDIL+FLTGQ+EI+ A E
Sbjct: 753 APIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDILLFLTGQEEIDTACE 812
Query: 278 ILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGI 337
IL +R + LG + ELII P+Y+ LP+E+Q +IF+P P +RKVV+ATNIAETSLTIDGI
Sbjct: 813 ILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPAGSRKVVIATNIAETSLTIDGI 872
Query: 338 KYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYH-R 396
YV+ PGF K K YN KTGM+SL+V PIS+A+A QR G + RTGPGK +RLYT Y
Sbjct: 873 FYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKTYRLYTERAYRDE 932
Query: 397 IWMTIL--CQKYN--ELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAG 452
+ T + Q+ N + ++ ++ N L++FDF+D P AL+ G
Sbjct: 933 MLPTPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESLVMALEQLHSLSALDDEG 992
Query: 453 QLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADN 512
LTR+GR+MAEFP++P LSK ++ +CSDEI+TI +ML V N +FYRPKDKQ AD
Sbjct: 993 LLTRLGRRMAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLSVQN-VFYRPKDKQALADQ 1051
Query: 513 ARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARV 572
+ F+ + GD + LL VYN W+ +S WC EN++Q+ ++KR++D+R QL G+ R
Sbjct: 1052 KKAKFNQAE-GDHLTLLAVYNSWKNNKFSNAWCYENFVQIRTLKRSQDVRKQLLGIMDRH 1110
Query: 573 EID 575
++D
Sbjct: 1111 KLD 1113
>TAIR|locus:2088847 [details] [associations]
symbol:AT3G26560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 EMBL:X98130
EMBL:X97970 EMBL:AB028611 IPI:IPI00530246 RefSeq:NP_189288.1
UniGene:At.46918 ProteinModelPortal:Q38953 SMR:Q38953 STRING:Q38953
PaxDb:Q38953 PRIDE:Q38953 EnsemblPlants:AT3G26560.1 GeneID:822264
KEGG:ath:AT3G26560 GeneFarm:1800 TAIR:At3g26560 InParanoid:Q38953
KO:K12818 OMA:NAWCYEN PhylomeDB:Q38953 ProtClustDB:CLSN2684863
Genevestigator:Q38953 GermOnline:AT3G26560 Uniprot:Q38953
Length = 1168
Score = 1403 (498.9 bits), Expect = 1.6e-143, P = 1.6e-143
Identities = 286/537 (53%), Positives = 378/537 (70%)
Query: 57 LQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------------- 103
+QE+R++LPIY +EL+QAV VL ++GETGSGKTTQ+ QYL E
Sbjct: 508 IQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKIGCTQ 567
Query: 104 PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLE 163
PR VAAMSVA RV++E G +LG EVGY+IRFEDCT TV+KYMTD MLLREI+I+ +L
Sbjct: 568 PRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLS 627
Query: 164 SYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKI 223
YSV+++DEA ERT+ TD LFGLLK L+ R DL+L+++SATLDAEKFS YF + IF I
Sbjct: 628 QYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCNIFTI 687
Query: 224 PGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRT 283
PGR +PVE+ YTK PE DY++AA++T LQIH+ EP GDILVFLTGQ+EI+ A + L +R
Sbjct: 688 PGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQSLYERM 747
Query: 284 RGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHP 343
+GLG + ELII P+Y+ LP+E+Q++IF+P P RKVV+ATNIAE SLTIDGI YV+ P
Sbjct: 748 KGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDP 807
Query: 344 GFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNY-HRIWMTIL 402
GFAK YNPK G+ESL++ PIS+ASA QR G + RTGPGKC+RLYT Y + + T +
Sbjct: 808 GFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSI 867
Query: 403 --CQKYN--ELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVG 458
Q+ N M ++ N L++FDF+DPP GAL++ G LT++G
Sbjct: 868 PEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGALDEEGLLTKLG 927
Query: 459 RQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFH 518
R+MAEFP++P LSK +++ CSDEI+T+ AM+ GN IFYRP++KQ AD R F
Sbjct: 928 RKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGN-IFYRPREKQAQADQKRAKFF 986
Query: 519 LGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVEID 575
+ GD + LL VY W+ N+S WC EN+IQ S++RA+D+R QL + + ++D
Sbjct: 987 QPE-GDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSIMDKYKLD 1042
>CGD|CAL0004768 [details] [associations]
symbol:PRP22 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0071021
"U2-type post-spliceosomal complex" evidence=IEA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0004768 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AACQ01000012 InterPro:IPR022967 SMART:SM00316
KO:K12818 EMBL:AACQ01000011 RefSeq:XP_721941.1 RefSeq:XP_722102.1
ProteinModelPortal:Q5AJY8 STRING:Q5AJY8 GeneID:3636272
GeneID:3636404 KEGG:cal:CaO19.11516 KEGG:cal:CaO19.4033
Uniprot:Q5AJY8
Length = 996
Score = 1270 (452.1 bits), Expect = 1.6e-143, Sum P(2) = 1.6e-143
Identities = 254/484 (52%), Positives = 339/484 (70%)
Query: 103 EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
+PR VAA SVA RVS+E+G KLG VGY+IRFED TS+ TV+KYMTD ML RE + +P++
Sbjct: 392 QPRRVAAESVAKRVSEEVGCKLGDTVGYTIRFEDVTSENTVIKYMTDGMLEREALNDPNM 451
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFK 222
YSV+++DEA ERT++TD LF LLK+ P+LK++++SATLD+ KFS YF + PI
Sbjct: 452 NRYSVIMLDEAHERTIATDVLFALLKNAAKQNPNLKVIVTSATLDSNKFSRYFNNCPIIT 511
Query: 223 IPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQR 282
IPGR +PVE+ YTKAPE+DY+ AA+ + +QIHV+EP GDILVFLTGQ+EIE + E L +R
Sbjct: 512 IPGRTFPVEVLYTKAPEMDYLAAALESVIQIHVSEPAGDILVFLTGQEEIETSCEALHER 571
Query: 283 TRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIH 342
+ LG I ELII P+Y+ LP+E+Q +IFEPTP +RKV+LATNIAETS+TIDGI YV+
Sbjct: 572 MKLLGENIPELIILPVYSALPSEMQTRIFEPTPPGSRKVILATNIAETSITIDGIYYVVD 631
Query: 343 PGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHR--IWMT 400
PGF K+ Y+ K GM+SL V PISKA ANQR+G + RTGPGKC+RLYT Y + I T
Sbjct: 632 PGFVKINMYDSKLGMDSLRVTPISKAQANQRSGRAGRTGPGKCYRLYTEQAYEKEMIPNT 691
Query: 401 IL-CQKYN--ELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRV 457
I Q+ N I + ++ + LVNF+F+DPP AL+ G LT +
Sbjct: 692 IPEIQRQNLSHTILMLKAMGIHDLVNFEFMDPPSTTTMLTALEDLYILDALDDDGNLTTL 751
Query: 458 GRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNF 517
GR+MA+ P++P L+KT++ +Y+C++EI++I AML V +IFYRPKDKQ AD + F
Sbjct: 752 GRKMADLPMEPALAKTLIQSVEYECTEEILSIVAMLSV-QTIFYRPKDKQALADQRKSRF 810
Query: 518 HLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVEIDTS 577
H +GD + LL V+ W NYS WCR+N+IQ SM+RA ++R QL+ + R T
Sbjct: 811 H-HSLGDHLTLLNVFQSWCRNNYSKTWCRDNFIQERSMRRAMEVRKQLKSIMQRFGYKTM 869
Query: 578 IYSN 581
N
Sbjct: 870 SCGN 873
Score = 154 (59.3 bits), Expect = 1.6e-143, Sum P(2) = 1.6e-143
Identities = 40/103 (38%), Positives = 59/103 (57%)
Query: 8 EKQQREKCTFEIEDKIVDFFSESVFDGDNFDEFESELP-----NKSVV--KSTLEMLQEE 60
++++ EK E+ D + SE V + D + ES + NK+ K T +QE+
Sbjct: 274 QREKEEKMQSELSDPLFQT-SEPVKNSDLDPDTESFISKWKKSNKTETFGKRTSLPIQEQ 332
Query: 61 RKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE 103
R+ LP+Y +LL+A+ + IVGETGSGKTTQI QY+YE
Sbjct: 333 RRMLPVYAMRSQLLEAIRDNQFVVIVGETGSGKTTQIVQYIYE 375
>ASPGD|ASPL0000070923 [details] [associations]
symbol:AN4721 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003723
EMBL:BN001303 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 EMBL:AACD01000080 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
OMA:NAWCYEN OrthoDB:EOG45TGW9 RefSeq:XP_662325.1
ProteinModelPortal:Q5B409 EnsemblFungi:CADANIAT00005708
GeneID:2872518 KEGG:ani:AN4721.2 Uniprot:Q5B409
Length = 1241
Score = 1400 (497.9 bits), Expect = 3.3e-143, P = 3.3e-143
Identities = 274/539 (50%), Positives = 379/539 (70%)
Query: 51 KSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------- 103
K T ++++R++LP+Y F ++LL+AV+ +L +VG+TGSGKTTQ+ QYL E
Sbjct: 564 KRTNMSIKQQRESLPVYKFRQQLLEAVAENQLLIVVGDTGSGKTTQVTQYLAEAGWANKG 623
Query: 104 ------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIV 157
PR VAAMSVA RV++E+G KLG EVGY+IRFEDCTS +T +KYMTD ML RE++
Sbjct: 624 IIGCTQPRRVAAMSVAKRVAEEVGCKLGAEVGYTIRFEDCTSPETKIKYMTDGMLQREVL 683
Query: 158 IEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGS 217
++P L+ YSV+++DEA ERT++TD LFGLLK + RPDL+L+++SATLDA+KFS+YF
Sbjct: 684 LDPDLKKYSVIMLDEAHERTIATDVLFGLLKTTLKRRPDLRLIVTSATLDADKFSEYFYG 743
Query: 218 APIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEE 277
PIF IPGR +PVE+ Y+K PE DY++AA++T +QIH+ EP GD+L+FLTGQ+EI+ A E
Sbjct: 744 CPIFSIPGRTFPVEIMYSKEPESDYLDAALITVMQIHLTEPPGDMLLFLTGQEEIDTACE 803
Query: 278 ILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGI 337
IL +R + LG + EL+I P+Y+ LP+E+Q++IF+P P RKVV+ATNIAETS+TID I
Sbjct: 804 ILYERMKALGPSVPELVILPVYSALPSEMQSRIFDPAPPGGRKVVIATNIAETSITIDNI 863
Query: 338 KYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRI 397
YVI PGF K K+Y+PK GM+SL+V PIS+A A QR G + RTGPGKCFRLYT Y
Sbjct: 864 YYVIDPGFVKQKAYDPKLGMDSLVVTPISQAQAKQRAGRAGRTGPGKCFRLYTEAAYQSE 923
Query: 398 WMT-----ILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAG 452
+ I Q + I + ++ N L++FDF+DPP AL+ G
Sbjct: 924 MLPTTIPDIQRQNLSHTILMLKAMGINDLLHFDFMDPPPTNTMLTALEELYALSALDDEG 983
Query: 453 QLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADN 512
LTR+GR+MA+FP++P L+K +++ CS+E+++I AML + S+FYRPK+KQ AD
Sbjct: 984 LLTRLGRKMADFPMEPALAKVLIASVDMGCSEEMLSIVAMLSI-QSVFYRPKEKQQQADQ 1042
Query: 513 ARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFAR 571
+ FH GD + LL VYN W+ +S WC EN+IQ ++RA+D+R QL G+ R
Sbjct: 1043 KKAKFH-DPHGDHLTLLNVYNAWKRSGFSNAWCYENFIQARQIRRAQDVRQQLLGIMQR 1100
>WB|WBGene00003393 [details] [associations]
symbol:mog-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 1384 (492.3 bits), Expect = 1.6e-141, P = 1.6e-141
Identities = 281/539 (52%), Positives = 378/539 (70%)
Query: 51 KSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------- 103
++ L M+ E+R++LPI+ + L++A+ +L +VGETGSGKTTQ+ QY E
Sbjct: 528 RTNLSMV-EQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRG 586
Query: 104 ------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIV 157
PR VAAMSVA RV++E G KLG +VGY+IRFEDCTS T++KYMTD MLLRE +
Sbjct: 587 KIGCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECL 646
Query: 158 IEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGS 217
I+P L YS++++DEA ERT+ TD LFGLLK RP+LKL+I+SATLD+ KFS+YF
Sbjct: 647 IDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLE 706
Query: 218 APIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEE 277
APIF IPGR +PVE+ YT+ PE DY+EAA +T +QIH+ EP GD+LVFLTGQ+EI+ + E
Sbjct: 707 APIFTIPGRTFPVEILYTREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCE 766
Query: 278 ILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGI 337
+L +R + +G + ELII P+Y LP+E+Q +IF+P P RKVV+ATNIAETSLTIDGI
Sbjct: 767 VLYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGI 826
Query: 338 KYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYH-R 396
YV+ PGF K K YNPK+GM+SL+V PIS+A+A QR+G + RTGPGKC+RLYT +
Sbjct: 827 FYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDE 886
Query: 397 IWMTIL--CQKYN--ELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAG 452
+ T + Q+ N + ++ ++ N L++FDF+D P AL+ G
Sbjct: 887 MLPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTLSALDGDG 946
Query: 453 QLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADN 512
LT++GR+MAEFP++P LSK ++ CS+E++TI AML V N IFYRPK+KQ +AD
Sbjct: 947 LLTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQN-IFYRPKEKQDHADQ 1005
Query: 513 ARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFAR 571
+ FH + GD + LL VYN W+ ++S WC EN+IQV SMKRA+DIR QL G+ R
Sbjct: 1006 KKAKFHQPE-GDHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMKRAQDIRKQLLGIMDR 1063
>UNIPROTKB|Q09530 [details] [associations]
symbol:mog-5 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 1384 (492.3 bits), Expect = 1.6e-141, P = 1.6e-141
Identities = 281/539 (52%), Positives = 378/539 (70%)
Query: 51 KSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------- 103
++ L M+ E+R++LPI+ + L++A+ +L +VGETGSGKTTQ+ QY E
Sbjct: 528 RTNLSMV-EQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRG 586
Query: 104 ------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIV 157
PR VAAMSVA RV++E G KLG +VGY+IRFEDCTS T++KYMTD MLLRE +
Sbjct: 587 KIGCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECL 646
Query: 158 IEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGS 217
I+P L YS++++DEA ERT+ TD LFGLLK RP+LKL+I+SATLD+ KFS+YF
Sbjct: 647 IDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLE 706
Query: 218 APIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEE 277
APIF IPGR +PVE+ YT+ PE DY+EAA +T +QIH+ EP GD+LVFLTGQ+EI+ + E
Sbjct: 707 APIFTIPGRTFPVEILYTREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCE 766
Query: 278 ILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGI 337
+L +R + +G + ELII P+Y LP+E+Q +IF+P P RKVV+ATNIAETSLTIDGI
Sbjct: 767 VLYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGI 826
Query: 338 KYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYH-R 396
YV+ PGF K K YNPK+GM+SL+V PIS+A+A QR+G + RTGPGKC+RLYT +
Sbjct: 827 FYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDE 886
Query: 397 IWMTIL--CQKYN--ELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAG 452
+ T + Q+ N + ++ ++ N L++FDF+D P AL+ G
Sbjct: 887 MLPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTLSALDGDG 946
Query: 453 QLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADN 512
LT++GR+MAEFP++P LSK ++ CS+E++TI AML V N IFYRPK+KQ +AD
Sbjct: 947 LLTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQN-IFYRPKEKQDHADQ 1005
Query: 513 ARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFAR 571
+ FH + GD + LL VYN W+ ++S WC EN+IQV SMKRA+DIR QL G+ R
Sbjct: 1006 KKAKFHQPE-GDHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMKRAQDIRKQLLGIMDR 1063
>GENEDB_PFALCIPARUM|PF10_0294 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 1320 (469.7 bits), Expect = 7.4e-137, Sum P(2) = 7.4e-137
Identities = 275/546 (50%), Positives = 374/546 (68%)
Query: 46 NKSV-VKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE- 103
N SV VK+TL + E+R LPIY +L++A+ VL ++GETGSGKTTQIPQYL+E
Sbjct: 613 NISVGVKNTLP-INEQRSKLPIYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEA 671
Query: 104 ------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCM 151
PR VAAMS+A RVS+E G LG EVGYSIRF+DCTS+ T++KY+TD M
Sbjct: 672 NYTEKGIVGCTQPRRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTSNDTIIKYLTDGM 731
Query: 152 LLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKF 211
LLRE + + L YS +I+DEA ERT+STD LF LLKD++ R D KL+++SATLDAEKF
Sbjct: 732 LLRETLSDTLLTKYSFIILDEAHERTISTDILFCLLKDVVRKRADFKLIVTSATLDAEKF 791
Query: 212 SDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDE 271
S YF ++PIF IPG+ +PVE+ ++K PE DY+EA+++T L IH+NE GDILVFLTGQDE
Sbjct: 792 STYFFNSPIFTIPGKIFPVEILHSKEPESDYVEASLITVLNIHLNEHPGDILVFLTGQDE 851
Query: 272 IERAEEILKQRTRGLGTKIAE-LIICPIYANLPTELQAKIFEPTPERARKVVLATNIAET 330
I A EIL +R + L + LII PIY++LP+E+Q+ IFEP P RK +LATNIAE
Sbjct: 852 INTACEILHERMKKLESMSPPPLIILPIYSSLPSEMQSVIFEPAPPGCRKCILATNIAEA 911
Query: 331 SLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYT 390
SLTIDGI +VI PGF K+K Y+ K M+SL+V PISKA+A QR G + RTGPGKC+RLYT
Sbjct: 912 SLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVAPISKANAKQRAGRAGRTGPGKCYRLYT 971
Query: 391 LHNYHRIW--MTIL-CQKYN--ELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXX 445
Y M++ Q+ N ++ + +L N ++FDF+D P
Sbjct: 972 EEAYKNEMSEMSVPEIQRINLGSIVLLLKALGINDFLHFDFMDSPSVETLIHSLENLYYL 1031
Query: 446 GALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKD 505
GAL+ G LT++G++MA FP++P LSK +++ + C+D+++TI +ML V N IFYRP++
Sbjct: 1032 GALDDNGYLTKLGKKMANFPMEPNLSKILLTSLNFNCTDDVVTIVSMLSVQN-IFYRPQN 1090
Query: 506 KQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQL 565
K + AD + F + GD I L +YN W+E ++S WC EN+IQ ++KRA+D+R Q+
Sbjct: 1091 KALLADKKKNKFIMPQ-GDLITYLNIYNKWKENSFSNYWCHENFIQSRALKRAQDVRKQM 1149
Query: 566 EGLFAR 571
+F +
Sbjct: 1150 LSIFEK 1155
Score = 41 (19.5 bits), Expect = 7.4e-137, Sum P(2) = 7.4e-137
Identities = 14/60 (23%), Positives = 27/60 (45%)
Query: 8 EKQQREKC-TFEIEDKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTLPI 66
EK ++ C T + ED ++ D D D+ E + K ++E+ +++K I
Sbjct: 112 EKMKKYHCLTLKNED------ITNLVDSDENDKKEKSIKGTKEKKESIEITSKQKKNSDI 165
>UNIPROTKB|Q8IJA4 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 1320 (469.7 bits), Expect = 7.4e-137, Sum P(2) = 7.4e-137
Identities = 275/546 (50%), Positives = 374/546 (68%)
Query: 46 NKSV-VKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE- 103
N SV VK+TL + E+R LPIY +L++A+ VL ++GETGSGKTTQIPQYL+E
Sbjct: 613 NISVGVKNTLP-INEQRSKLPIYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEA 671
Query: 104 ------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCM 151
PR VAAMS+A RVS+E G LG EVGYSIRF+DCTS+ T++KY+TD M
Sbjct: 672 NYTEKGIVGCTQPRRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTSNDTIIKYLTDGM 731
Query: 152 LLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKF 211
LLRE + + L YS +I+DEA ERT+STD LF LLKD++ R D KL+++SATLDAEKF
Sbjct: 732 LLRETLSDTLLTKYSFIILDEAHERTISTDILFCLLKDVVRKRADFKLIVTSATLDAEKF 791
Query: 212 SDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDE 271
S YF ++PIF IPG+ +PVE+ ++K PE DY+EA+++T L IH+NE GDILVFLTGQDE
Sbjct: 792 STYFFNSPIFTIPGKIFPVEILHSKEPESDYVEASLITVLNIHLNEHPGDILVFLTGQDE 851
Query: 272 IERAEEILKQRTRGLGTKIAE-LIICPIYANLPTELQAKIFEPTPERARKVVLATNIAET 330
I A EIL +R + L + LII PIY++LP+E+Q+ IFEP P RK +LATNIAE
Sbjct: 852 INTACEILHERMKKLESMSPPPLIILPIYSSLPSEMQSVIFEPAPPGCRKCILATNIAEA 911
Query: 331 SLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYT 390
SLTIDGI +VI PGF K+K Y+ K M+SL+V PISKA+A QR G + RTGPGKC+RLYT
Sbjct: 912 SLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVAPISKANAKQRAGRAGRTGPGKCYRLYT 971
Query: 391 LHNYHRIW--MTIL-CQKYN--ELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXX 445
Y M++ Q+ N ++ + +L N ++FDF+D P
Sbjct: 972 EEAYKNEMSEMSVPEIQRINLGSIVLLLKALGINDFLHFDFMDSPSVETLIHSLENLYYL 1031
Query: 446 GALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKD 505
GAL+ G LT++G++MA FP++P LSK +++ + C+D+++TI +ML V N IFYRP++
Sbjct: 1032 GALDDNGYLTKLGKKMANFPMEPNLSKILLTSLNFNCTDDVVTIVSMLSVQN-IFYRPQN 1090
Query: 506 KQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQL 565
K + AD + F + GD I L +YN W+E ++S WC EN+IQ ++KRA+D+R Q+
Sbjct: 1091 KALLADKKKNKFIMPQ-GDLITYLNIYNKWKENSFSNYWCHENFIQSRALKRAQDVRKQM 1149
Query: 566 EGLFAR 571
+F +
Sbjct: 1150 LSIFEK 1155
Score = 41 (19.5 bits), Expect = 7.4e-137, Sum P(2) = 7.4e-137
Identities = 14/60 (23%), Positives = 27/60 (45%)
Query: 8 EKQQREKC-TFEIEDKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTLPI 66
EK ++ C T + ED ++ D D D+ E + K ++E+ +++K I
Sbjct: 112 EKMKKYHCLTLKNED------ITNLVDSDENDKKEKSIKGTKEKKESIEITSKQKKNSDI 165
>SGD|S000000815 [details] [associations]
symbol:PRP22 "DEAH-box RNA-dependent ATPase/ATP-dependent RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IDA;IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IMP;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0071021 "U2-type post-spliceosomal complex"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 SGD:S000000815 GO:GO:0005524 KO:K01897
GO:GO:0003723 EMBL:BK006939 EMBL:U18778 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0071007 InterPro:IPR022967
SMART:SM00316 GO:GO:0000390 GeneTree:ENSGT00700000104241 KO:K12818
GO:GO:0000350 RefSeq:NP_010931.3 GeneID:856734 KEGG:sce:YER015W
OrthoDB:EOG45TGW9 EMBL:X58681 PIR:S13643 RefSeq:NP_010929.3
ProteinModelPortal:P24384 SMR:P24384 DIP:DIP-655N IntAct:P24384
MINT:MINT-648209 STRING:P24384 PaxDb:P24384 EnsemblFungi:YER013W
GeneID:856732 KEGG:sce:YER013W CYGD:YER013w OMA:QITQYLD
NextBio:982846 Genevestigator:P24384 GermOnline:YER013W
GO:GO:0071021 Uniprot:P24384
Length = 1145
Score = 1330 (473.2 bits), Expect = 8.5e-136, P = 8.5e-136
Identities = 268/554 (48%), Positives = 377/554 (68%)
Query: 39 EFESELPNKSVV--KSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQ 96
E+E N+S+ K T + +R+TLP+Y EL+QAV L IVGETGSGKTTQ
Sbjct: 456 EWEKNRMNESISYGKRTSLPISAQRQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQ 515
Query: 97 IPQYLYE-------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTV 143
I QYL E PR VAA+SVA RV++E+G K+GH+VGY+IRFED T T
Sbjct: 516 ITQYLDEEGFSNYGMIGCTQPRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTR 575
Query: 144 LKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISS 203
+KYMTD ML RE +++P + YSV+++DEA ERT++TD LF LLK RP+LK++++S
Sbjct: 576 IKYMTDGMLQREALLDPEMSKYSVIMLDEAHERTVATDVLFALLKKAAIKRPELKVIVTS 635
Query: 204 ATLDAEKFSDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDIL 263
ATL++ KFS+YF + PI IPG+ +PVE+ Y++ P++DYIEAA+ + IH+NE GDIL
Sbjct: 636 ATLNSAKFSEYFLNCPIINIPGKTFPVEVLYSQTPQMDYIEAALDCVIDIHINEGPGDIL 695
Query: 264 VFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVL 323
VFLTGQ+EI+ EIL R + LG I EL+I P+Y+ LP+E+Q+KIFEPTP+ +RKVV
Sbjct: 696 VFLTGQEEIDSCCEILYDRVKTLGDSIGELLILPVYSALPSEIQSKIFEPTPKGSRKVVF 755
Query: 324 ATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPG 383
ATNIAETS+TIDGI YV+ PGFAK+ YN + G+E L+V+PIS+A ANQR G + RTGPG
Sbjct: 756 ATNIAETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPG 815
Query: 384 KCFRLYTLHNYHRIWMT-----ILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXX 438
KC+RLYT ++ + I Q + I + ++ N L+ FDF+DPP
Sbjct: 816 KCYRLYTESAFYNEMLENTVPEIQRQNLSHTILMLKAMGINDLLKFDFMDPPPKNLMLNA 875
Query: 439 XXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNS 498
+L+ G+LT +G++M+ FP+DP LS++++S +CSDEI+TI +ML V N
Sbjct: 876 LTELYHLQSLDDEGKLTNLGKEMSLFPMDPTLSRSLLSSVDNQCSDEIVTIISMLSVQN- 934
Query: 499 IFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRA 558
+FYRPKD+Q+ AD+ + FH GD + LL VY W++ NYS ++C+ N++ +KRA
Sbjct: 935 VFYRPKDRQLEADSKKAKFH-HPYGDHLTLLNVYTRWQQANYSEQYCKTNFLHFRHLKRA 993
Query: 559 RDIRDQLEGLFARV 572
RD++ Q+ +F ++
Sbjct: 994 RDVKSQISMIFKKI 1007
>POMBASE|SPAC10F6.02c [details] [associations]
symbol:prp22 "ATP-dependent RNA helicase Prp22"
species:4896 "Schizosaccharomyces pombe" [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPAC10F6.02c GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GO:GO:0000390 KO:K12818
OMA:NAWCYEN PIR:T37496 RefSeq:NP_593253.1 ProteinModelPortal:O42643
IntAct:O42643 STRING:O42643 PRIDE:O42643
EnsemblFungi:SPAC10F6.02c.1 GeneID:2542978 KEGG:spo:SPAC10F6.02c
OrthoDB:EOG45TGW9 NextBio:20804011 Uniprot:O42643
Length = 1168
Score = 1327 (472.2 bits), Expect = 1.8e-135, P = 1.8e-135
Identities = 276/545 (50%), Positives = 368/545 (67%)
Query: 46 NKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE-- 103
N S K T ++E+R+ LP++ ++ L+AVS +L ++GETGSGKTTQI QYL E
Sbjct: 492 NISYGKRTTLSMKEQREGLPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEEG 551
Query: 104 ------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCM 151
PR VAAMSVA RV++E+G ++G EVGY+IRFED TS T +KYMTD M
Sbjct: 552 YTSDSKMIGCTQPRRVAAMSVAKRVAEEVGCRVGEEVGYTIRFEDKTSRMTQIKYMTDGM 611
Query: 152 LLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKF 211
L RE +++P L YSV+I+DEA ERT++TD LFGLLK + RPDLKL+++SATLDAE+F
Sbjct: 612 LQRECLVDPLLSKYSVIILDEAHERTVATDVLFGLLKGTVLKRPDLKLIVTSATLDAERF 671
Query: 212 SDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDE 271
S YF PIF IPGR YPVE+ YTK PE DY++AA++T +QIH++E GDILVFLTGQ+E
Sbjct: 672 SSYFYKCPIFTIPGRSYPVEIMYTKQPEADYLDAALMTVMQIHLSEGPGDILVFLTGQEE 731
Query: 272 IERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETS 331
I+ + EIL +R++ LG I EL+I P+Y+ LP+E+Q++IFEP P RKVV+ATNIAETS
Sbjct: 732 IDTSCEILYERSKMLGDSIPELVILPVYSALPSEIQSRIFEPAPPGGRKVVIATNIAETS 791
Query: 332 LTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTL 391
LTIDGI YV+ PGF K ++PK GM+SL+V PIS+A A QR+G + RTGPGKC+RLYT
Sbjct: 792 LTIDGIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRSGRAGRTGPGKCYRLYTE 851
Query: 392 HNYHRIWMT-----ILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXG 446
Y + I Q + I + ++ N L+NFDF+DPP
Sbjct: 852 SAYRNEMLPSPIPEIQRQNLSHTILMLKAMGINDLLNFDFMDPPPAQTMIAALQNLYALS 911
Query: 447 ALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDK 506
AL+ G LT +GR+MA+FP++P+LSK +++ + CS+E+++I AML V N I+ RP++K
Sbjct: 912 ALDDEGLLTPLGRKMADFPMEPQLSKVLITSVELGCSEEMLSIIAMLSVPN-IWSRPREK 970
Query: 507 QIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLE 566
Q AD R F D + LL VY W+ S WC E+YIQ M+RA D+R QL
Sbjct: 971 QQEADRQRAQF-ANPESDHLTLLNVYTTWKMNRCSDNWCYEHYIQARGMRRAEDVRKQLI 1029
Query: 567 GLFAR 571
L R
Sbjct: 1030 RLMDR 1034
>TAIR|locus:2095989 [details] [associations]
symbol:AT3G62310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL162507 KO:K12820
ProtClustDB:CLSN2683587 OMA:TVLQIHA EMBL:AY120782 EMBL:BT010331
IPI:IPI00540868 PIR:T48023 RefSeq:NP_191790.1 UniGene:At.34140
UniGene:At.4777 ProteinModelPortal:Q9LZQ9 SMR:Q9LZQ9 IntAct:Q9LZQ9
PaxDb:Q9LZQ9 PRIDE:Q9LZQ9 EnsemblPlants:AT3G62310.1 GeneID:825404
KEGG:ath:AT3G62310 TAIR:At3g62310 InParanoid:Q9LZQ9
PhylomeDB:Q9LZQ9 ArrayExpress:Q9LZQ9 Genevestigator:Q9LZQ9
Uniprot:Q9LZQ9
Length = 726
Score = 1200 (427.5 bits), Expect = 1.2e-132, Sum P(2) = 1.2e-132
Identities = 244/485 (50%), Positives = 334/485 (68%)
Query: 103 EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
+PR VAAMSV+ RV++EM V +G EVGYSIRFEDC+S +TVLKY+TD MLLRE + +P L
Sbjct: 119 QPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSPRTVLKYLTDGMLLREAMADPLL 178
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFK 222
E Y V+I+DEA ERTL+TD LFGLLK+++ RPDLKL++ SATL+AEKF DYF AP+ K
Sbjct: 179 ERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQDYFSGAPLMK 238
Query: 223 IPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQR 282
+PGR +PVE+FYT+ PE DY+EAAI T +QIH+ EP GDILVFLTG++EIE A + +
Sbjct: 239 VPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKINKE 298
Query: 283 TRGLGTKIAELIICPIYANLPTELQAKIFEPTPERA-------RKVVLATNIAETSLTID 335
LG ++ + + P+Y+ LP +Q KIF+P PE RK+V++TNIAETSLTID
Sbjct: 299 VGNLGDQVGPIKVVPLYSTLPPAMQQKIFDPAPEPVTEGGPPGRKIVVSTNIAETSLTID 358
Query: 336 GIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYH 395
GI YVI PGFAK K YNP+ +ESLLV+PISKASA+QR+G + RT PGKCFRLYT +++
Sbjct: 359 GIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKSFN 418
Query: 396 -----RIWMTILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNK 450
+ + IL + + L + LV+FDF+DPP GAL+
Sbjct: 419 NDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDD 478
Query: 451 AGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYA 510
G LT+ G M+EFP+DP+++K ++ ++ CS+EI++++AML V N F RP++ Q A
Sbjct: 479 DGNLTKTGEIMSEFPLDPQMAKMLIVSPEFNCSNEILSVSAMLSVPNC-FIRPREAQKAA 537
Query: 511 DNARMNFHLGDV-GDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLF 569
D A+ F G + GD + LL VY+ +++ N WC EN+I +MK A ++R QL +
Sbjct: 538 DEAKARF--GHIEGDHLTLLNVYHAFKQNNEDPNWCYENFINNRAMKSADNVRQQLVRIM 595
Query: 570 ARVEI 574
+R +
Sbjct: 596 SRFNL 600
Score = 121 (47.7 bits), Expect = 1.2e-132, Sum P(2) = 1.2e-132
Identities = 23/45 (51%), Positives = 34/45 (75%)
Query: 59 EERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE 103
E+R+TLP++ EE L+ ++ L +VGETGSGKTTQIPQ++ +
Sbjct: 56 EKRRTLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFVID 100
>TAIR|locus:2065210 [details] [associations]
symbol:AT2G47250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0008380
GO:GO:0006397 GO:GO:0009941 GO:GO:0003676 EMBL:AC002337
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:AY128301 EMBL:BT004534 IPI:IPI00540033 PIR:H84912
RefSeq:NP_182247.1 UniGene:At.36388 ProteinModelPortal:O22899
SMR:O22899 PaxDb:O22899 PRIDE:O22899 EnsemblPlants:AT2G47250.1
GeneID:819338 KEGG:ath:AT2G47250 GeneFarm:1798 TAIR:At2g47250
InParanoid:O22899 KO:K12820 OMA:XEIDEAC PhylomeDB:O22899
ProtClustDB:CLSN2683587 Genevestigator:O22899 GermOnline:AT2G47250
Uniprot:O22899
Length = 729
Score = 1196 (426.1 bits), Expect = 4.8e-131, Sum P(2) = 4.8e-131
Identities = 242/485 (49%), Positives = 332/485 (68%)
Query: 103 EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
+PR VAAMSV+ RV+ EM V +G EVGYSIRFEDCTS +T+LKY+TD MLLRE + +P L
Sbjct: 123 QPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREAMADPLL 182
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFK 222
E Y V+I+DEA ERTL+TD LFGLLK+++ RPDLKL++ SATL+AEKF +YF AP+ K
Sbjct: 183 ERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSGAPLMK 242
Query: 223 IPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQR 282
+PGR +PVE+FYT+ PE DY+EAAI T +QIH+ EP GDILVFLTG++EIE A + +
Sbjct: 243 VPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKINKE 302
Query: 283 TRGLGTKIAELIICPIYANLPTELQAKIFEPTP-------ERARKVVLATNIAETSLTID 335
LG ++ + + P+Y+ LP +Q KIF+P P RK+V++TNIAETSLTID
Sbjct: 303 VSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVVSTNIAETSLTID 362
Query: 336 GIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYH 395
GI YVI PGFAK K YNP+ +ESLLV+PISKASA+QR+G + RT PGKCFRLYT +++
Sbjct: 363 GIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKSFN 422
Query: 396 -----RIWMTILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNK 450
+ + IL + + L + LV+FDF+DPP GAL+
Sbjct: 423 NDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDD 482
Query: 451 AGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYA 510
G LT+ G M+EFP+DP++SK ++ ++ CS+EI++++AML V N F RP++ Q A
Sbjct: 483 EGNLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAMLSVPNC-FVRPREAQKAA 541
Query: 511 DNARMNF-HLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLF 569
D A+ F H+ GD + LL VY+ +++ N WC EN++ +MK A ++R QL +
Sbjct: 542 DEAKARFGHID--GDHLTLLNVYHAYKQNNEDPNWCFENFVNNRAMKSADNVRQQLVRIM 599
Query: 570 ARVEI 574
+R +
Sbjct: 600 SRFNL 604
Score = 110 (43.8 bits), Expect = 4.8e-131, Sum P(2) = 4.8e-131
Identities = 23/57 (40%), Positives = 38/57 (66%)
Query: 47 KSVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE 103
K+ + E+L E+R+ LP++ ++ L ++ L +VGETGSGKTTQIPQ++ +
Sbjct: 49 KAYSQRYFEIL-EKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLD 104
>UNIPROTKB|Q5JP46 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOVERGEN:HBG039428 UniGene:Hs.485060
HGNC:HGNC:2739 IPI:IPI00292510 SMR:Q5JP46 Ensembl:ENST00000383576
UCSC:uc011ijt.2 Uniprot:Q5JP46
Length = 560
Score = 1252 (445.8 bits), Expect = 1.6e-127, P = 1.6e-127
Identities = 242/416 (58%), Positives = 310/416 (74%)
Query: 167 VLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGR 226
V++VDEA ERTL TD LFGL+KD+ +RP+LK+L++SAT+D +FS +F AP+F+IPGR
Sbjct: 35 VVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDGAPVFRIPGR 94
Query: 227 RYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGL 286
R+PV++FYTKAPE DY+EA +V+ LQIHV +P GDILVFLTGQ+EIE A E+L+ R R L
Sbjct: 95 RFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRL 154
Query: 287 GTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFA 346
G+KI EL++ PIYANLP+++QA+IF+PTP ARKVV+ATNIAETSLTI+GI YV+ PGF
Sbjct: 155 GSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFC 214
Query: 347 KVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNY-HRIWMTILCQ- 404
K KSYNP+TGMESL V P SKASANQR G + R GKCFRLYT Y H + T + +
Sbjct: 215 KQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEI 274
Query: 405 ---KYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQM 461
++ + SL + L++FDF+DPP GALN G+LT GR+M
Sbjct: 275 QRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKM 334
Query: 462 AEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGD 521
AE P+DP LSK I++ +KY CS+EI+T+AAML V NSIFYRPKDK ++ADNAR+NF L
Sbjct: 335 AELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPG 394
Query: 522 VGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVEIDTS 577
GD + LL VY W E YS++WC EN++Q SM+RARD+R+QLEGL RVE+ S
Sbjct: 395 -GDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLS 449
>UNIPROTKB|Q5SQH5 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CH471081 GO:GO:0003676 EMBL:BX119957 EMBL:CR753328
EMBL:CR759778 EMBL:AL732442 EMBL:BX908728 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
UniGene:Hs.485060 HGNC:HGNC:2739 EMBL:CR788240 EMBL:AL662798
EMBL:CU013522 IPI:IPI00644906 SMR:Q5SQH5 Ensembl:ENST00000376437
Ensembl:ENST00000414052 Ensembl:ENST00000445379
Ensembl:ENST00000449861 Ensembl:ENST00000451748
Ensembl:ENST00000453879 UCSC:uc003nqy.3 Uniprot:Q5SQH5
Length = 560
Score = 1252 (445.8 bits), Expect = 1.6e-127, P = 1.6e-127
Identities = 242/416 (58%), Positives = 310/416 (74%)
Query: 167 VLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGR 226
V++VDEA ERTL TD LFGL+KD+ +RP+LK+L++SAT+D +FS +F AP+F+IPGR
Sbjct: 35 VVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGR 94
Query: 227 RYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGL 286
R+PV++FYTKAPE DY+EA +V+ LQIHV +P GDILVFLTGQ+EIE A E+L+ R R L
Sbjct: 95 RFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRL 154
Query: 287 GTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFA 346
G+KI EL++ PIYANLP+++QA+IF+PTP ARKVV+ATNIAETSLTI+GI YV+ PGF
Sbjct: 155 GSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFC 214
Query: 347 KVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNY-HRIWMTILCQ- 404
K KSYNP+TGMESL V P SKASANQR G + R GKCFRLYT Y H + T + +
Sbjct: 215 KQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEI 274
Query: 405 ---KYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQM 461
++ + SL + L++FDF+DPP GALN G+LT GR+M
Sbjct: 275 QRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKM 334
Query: 462 AEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGD 521
AE P+DP LSK I++ +KY CS+EI+T+AAML V NSIFYRPKDK ++ADNAR+NF L
Sbjct: 335 AELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPG 394
Query: 522 VGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVEIDTS 577
GD + LL VY W E YS++WC EN++Q SM+RARD+R+QLEGL RVE+ S
Sbjct: 395 -GDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLS 449
>DICTYBASE|DDB_G0285843 [details] [associations]
symbol:helD "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0285843 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000082 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
KO:K12815 RefSeq:XP_638016.1 EnsemblProtists:DDB0191460
GeneID:8625367 KEGG:ddi:DDB_G0285843 InParanoid:Q54MH4
ProtClustDB:CLSZ2846702 Uniprot:Q54MH4
Length = 1387
Score = 1245 (443.3 bits), Expect = 8.7e-127, P = 8.7e-127
Identities = 253/547 (46%), Positives = 371/547 (67%)
Query: 52 STLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE-------- 103
S + ++E+R+ LPI+ +L++ + V+ IVGETGSGKTTQ+ QYLYE
Sbjct: 647 SKTKTIKEQREFLPIFGCRNDLMKIIRENNVIIIVGETGSGKTTQLVQYLYEDGYSKFGK 706
Query: 104 -----PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVI 158
PR VAA+SVA RVS+EM V LG+EVGYSIRFEDCTS++T +KYMTD +LLRE
Sbjct: 707 IGCTQPRRVAAVSVAKRVSEEMSVTLGNEVGYSIRFEDCTSNETAIKYMTDGILLRESFN 766
Query: 159 EPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSA 218
+P+L+ YS +I+DEA ER+L+TD LFG+LK +++ R D+KL+++SAT+D++KFS +FG
Sbjct: 767 DPNLDKYSAIIMDEAHERSLNTDVLFGILKKVMSRRYDMKLIVTSATMDSKKFSMFFGDV 826
Query: 219 PIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEI 278
P+F IPGR +PV++ ++K P DY+++A+ L IHV + GDILVF+TGQ++IE
Sbjct: 827 PVFTIPGRTFPVDVLWSKTPCEDYVDSAVKQILSIHVTQGVGDILVFMTGQEDIETTCAT 886
Query: 279 LKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIK 338
+++R + LG + L + PIY+ LP+++QAKIFE +RK ++ATNIAETSLT+DGI
Sbjct: 887 VEERIKQLGPQAPPLTLLPIYSQLPSDMQAKIFEKADNGSRKCIIATNIAETSLTVDGIL 946
Query: 339 YVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYT--LHNYHR 396
YVI G+ K+K YNP+ GM+SL V PISKA+ANQR+G + RTGPG+C+RLYT Y
Sbjct: 947 YVIDTGYCKLKVYNPRVGMDSLQVTPISKANANQRSGRAGRTGPGRCYRLYTESAFKYEL 1006
Query: 397 IWMTIL-CQKYN--ELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQ 453
+ I Q+ N ++ + S+ L++FDF+DPP GAL+ GQ
Sbjct: 1007 MDNNIPEIQRTNLGNVVLNLKSMGVKNLLDFDFMDPPPQDNILNSMYQLWVLGALDDQGQ 1066
Query: 454 LTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNA 513
+T +G++M+EFP+DP LSK ++ ++ C +I+TI +ML + S+FYRPK + +D +
Sbjct: 1067 ITPLGKRMSEFPLDPPLSKMVIVAEQLGCGQDIVTIVSMLSMP-SVFYRPKGAEEESDAS 1125
Query: 514 RMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVE 573
R F + + D + LL VY W+ NYS++WC E+YI + +M++ R++R QL L V+
Sbjct: 1126 REKFFVPE-SDHLTLLHVYQQWKINNYSSQWCAEHYIHIKAMRKVREVRGQL--LDIMVQ 1182
Query: 574 IDTSIYS 580
D + S
Sbjct: 1183 HDMKVES 1189
>POMBASE|SPBC1711.17 [details] [associations]
symbol:prp16 "ATP-dependent RNA helicase Prp16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC1711.17 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K12815 GO:GO:0000350 OMA:PSRSTWE PIR:T39724 RefSeq:NP_595890.2
ProteinModelPortal:Q9P774 IntAct:Q9P774 EnsemblFungi:SPBC1711.17.1
GeneID:2540006 KEGG:spo:SPBC1711.17 OrthoDB:EOG4GQTD2
NextBio:20801149 Uniprot:Q9P774
Length = 1173
Score = 1240 (441.6 bits), Expect = 2.9e-126, P = 2.9e-126
Identities = 265/559 (47%), Positives = 369/559 (66%)
Query: 42 SELPNKSVVK-STLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQY 100
SE NK + + + +E+R+ LP + E+LL + VL +VGETGSGKTTQ+ Q+
Sbjct: 469 SEQSNKKDTEFARTKSYREQREFLPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQF 528
Query: 101 LYE-------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYM 147
LYE PR VAAMSVA RVS+EMGV+LG VGYSIRFED T TV+KYM
Sbjct: 529 LYEDGYHRNGMIGCTQPRRVAAMSVAKRVSEEMGVRLGSTVGYSIRFEDVTGPDTVIKYM 588
Query: 148 TDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLD 207
TD +LLRE +++ +LE YSV+I+DEA ER+L+TD L GLLK +++ R D+KLL++SAT++
Sbjct: 589 TDGVLLRESLMQNNLEKYSVIIMDEAHERSLNTDILMGLLKKVLSRRRDIKLLVTSATMN 648
Query: 208 AEKFSDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLT 267
++KFSD+FG AP F IPGR YPV++ + KAP DY+EAA+ LQIH+++P GDILVF+T
Sbjct: 649 SQKFSDFFGGAPQFTIPGRTYPVDIMFAKAPCSDYVEAAVRQVLQIHLSQPAGDILVFMT 708
Query: 268 GQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNI 327
GQ++IE EI+ R L L I PIY+ +P +LQAKIF+ RKVV+ATNI
Sbjct: 709 GQEDIEATCEIIADRLNQLHDA-PRLSILPIYSQMPADLQAKIFDSAEPGVRKVVVATNI 767
Query: 328 AETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFR 387
AETSLT+ GI YV+ G+ K+K YN K G+++L V PIS+A+ANQR G + RTGPG +R
Sbjct: 768 AETSLTVHGISYVVDTGYCKLKMYNSKLGIDTLQVTPISQANANQRAGRAGRTGPGIAYR 827
Query: 388 LYTLHNYHR-IWMTIL--CQKYN--ELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXX 442
LYT Y R ++ T L Q+ N + + SL + +FDF+D P
Sbjct: 828 LYTEMAYIREMFETTLPEIQRTNLSNTVLILKSLGVEEISDFDFMDRPPNDTLMASLYEL 887
Query: 443 XXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYR 502
GAL+ G+LT +G++M+ FP+DP LSK I+ + YKC++EIITI +ML V S+FYR
Sbjct: 888 WTLGALDNFGKLTTLGKKMSLFPMDPSLSKLIIIAEDYKCTEEIITIVSMLSVP-SVFYR 946
Query: 503 PKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIR 562
PK++ +D AR F++ + D + LL +Y W+ YS WC ++++ ++KRARDIR
Sbjct: 947 PKERAEESDAAREKFNVPE-SDHLMLLNIYQHWQRNGYSNSWCSKHFLHSKTLKRARDIR 1005
Query: 563 DQLEGLFARVEIDTSIYSN 581
QL + ++ +I S+
Sbjct: 1006 QQLVEIMSKQKISLESVSD 1024
>CGD|CAL0002409 [details] [associations]
symbol:orf19.5865 species:5476 "Candida albicans" [GO:0071006
"U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0000349
"generation of catalytic spliceosome for first transesterification
step" evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
CGD:CAL0002409 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003 EMBL:AACQ01000004
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12814 RefSeq:XP_722935.1 RefSeq:XP_723081.1 GeneID:3635187
GeneID:3635307 KEGG:cal:CaO19.13287 KEGG:cal:CaO19.5865
Uniprot:Q5ANN5
Length = 865
Score = 1231 (438.4 bits), Expect = 2.6e-125, P = 2.6e-125
Identities = 265/570 (46%), Positives = 371/570 (65%)
Query: 18 EIEDKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTLPIYPFWEELLQAV 77
E E I D S+S+ G+ +DE LP S + L+++ E + + + +
Sbjct: 206 EEESGIRD--SDSII-GNKYDEVRKSLPVYSYREEFLKIINENQTLIVVGETGSGKTTQL 262
Query: 78 SGYPVLAIVGETGSGKTTQIPQYLYEPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFED- 136
Y + E G + Q+ +PR VAA SVA RV+ EM VKLG +VGY+IRF+D
Sbjct: 263 PQY-----LHEAGYSRNNQVIACT-QPRRVAATSVANRVANEMQVKLGEQVGYNIRFDDN 316
Query: 137 CTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLI--NYR 194
C TV+KY+TD MLLRE + +P+L YS +++DEA ERTLST+ L LLKD++ +
Sbjct: 317 CKDGVTVIKYVTDGMLLREFLQDPTLGKYSAIMIDEAHERTLSTEILLSLLKDVMMTTRK 376
Query: 195 PDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIH 254
DLK++I+SAT++AEKFS +F +API IPGRR+PV++ YTK PE +YI+AAI T QIH
Sbjct: 377 DDLKIIIASATINAEKFSQFFNNAPILNIPGRRFPVKIHYTKQPEANYIQAAITTIFQIH 436
Query: 255 VNEPT-GDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEP 313
+ +P GDILVFLTGQDEIE EEIL+ LG +I +I+C IYANLP ELQ KIF+P
Sbjct: 437 MTQPLPGDILVFLTGQDEIETMEEILRDSILKLGDQIDPMIVCSIYANLPQELQQKIFQP 496
Query: 314 TPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQR 373
TP RK+VLATNIAETS+TIDGI YVI PG+ K YNP TGMESL+V P S+ASA+QR
Sbjct: 497 TPSNTRKIVLATNIAETSITIDGISYVIDPGYVKQNVYNPTTGMESLVVVPCSRASADQR 556
Query: 374 TGLSERTGPGKCFRLYTLHNYHRIWMTIL---CQKYN--ELIWKMLSLFSNVLVNFDFID 428
G + R GPGKCFRL+T +++ + Q+ N +I +LSL N L+ F+F+D
Sbjct: 557 AGRAGRVGPGKCFRLFTKWSFYNELDSNQQPEIQRVNLTSVILLLLSLGINDLLGFEFMD 616
Query: 429 PPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIIT 488
PP GALN G+LT+ G++M+EFP+DP +K I++ DK+ + +II+
Sbjct: 617 PPSKEAIIKALNLLYALGALNTQGKLTKTGKKMSEFPLDPVFTKCILTSDKFDNTKQIIS 676
Query: 489 IAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDV-GDRIALLRVYNCWRECNYSTEWCRE 547
I AML +++FYRPKDK+ AD + F+ D+ GD+ LL+++ W + YS +WC++
Sbjct: 677 IIAMLNESSNLFYRPKDKKELADKRKQEFN--DLQGDQFMLLKIWQQWVDSGYSVQWCQD 734
Query: 548 NYIQVSSMKRARDIRDQLEGLFARVEIDTS 577
+IQ +MKR ++I +QL L ++ I+ +
Sbjct: 735 YFIQYKTMKRIKNIYEQLIRLSKKIGIEVN 764
>FB|FBgn0033160 [details] [associations]
symbol:CG11107 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC;ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0016779 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA EMBL:AY058484 RefSeq:NP_610269.1 UniGene:Dm.4189
SMR:Q7K3M5 STRING:Q7K3M5 EnsemblMetazoa:FBtr0088966 GeneID:35654
KEGG:dme:Dmel_CG11107 UCSC:CG11107-RA FlyBase:FBgn0033160
InParanoid:Q7K3M5 OrthoDB:EOG4D254T GenomeRNAi:35654 NextBio:794560
Uniprot:Q7K3M5
Length = 729
Score = 1231 (438.4 bits), Expect = 2.6e-125, P = 2.6e-125
Identities = 263/545 (48%), Positives = 359/545 (65%)
Query: 57 LQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------------- 103
L ++R LP++ + + ++ +S + + +VGETGSGKTTQIPQ+ +
Sbjct: 65 LYKKRIALPVFEYQADFMRLLSLHQCIVLVGETGSGKTTQIPQWCVDFAVSKGRKGVSCT 124
Query: 104 -PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
PR VAAMSVA RVS+EM VKLG EVGYSIRFEDC++ KT+LKYMTD MLLRE + +P L
Sbjct: 125 QPRRVAAMSVAQRVSEEMDVKLGEEVGYSIRFEDCSTAKTLLKYMTDGMLLREAMSDPML 184
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFK 222
+ Y V+++DEA ERTL+TD L G+LK++I R DLKL++ SATLDA KF YF +AP+ K
Sbjct: 185 DQYQVILLDEAHERTLATDILMGVLKEVIRQRSDLKLVVMSATLDAGKFQQYFDNAPLMK 244
Query: 223 IPGRRYPVELFYTKAPEVDYIEAAIVTALQIHV-NEPTGDILVFLTGQDEIERAEEILKQ 281
+PGR +PVE+FYT PE DY+EAAI T +QIH+ E GDIL+FLTGQ+EIE A + +K+
Sbjct: 245 VPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEIEGDILMFLTGQEEIEEACKRIKR 304
Query: 282 RTRGLGTKIAELIICPIYANLPTELQAKIFEPTPER------ARKVVLATNIAETSLTID 335
LG++I EL P+Y+ LP LQ +IFEP P RKVV++TNIAETSLTID
Sbjct: 305 EIDNLGSEIGELKCIPLYSTLPPNLQQRIFEPAPPPNANGAIGRKVVVSTNIAETSLTID 364
Query: 336 GIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYH 395
G+ +VI PGFAK K YNP+ +ESLLV+PISKASA QR+G + RT PGKCFRLYT +
Sbjct: 365 GVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRSGRAGRTRPGKCFRLYTEKAFK 424
Query: 396 R-----IWMTILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNK 450
+ IL ++ ++ L + LV+FDF+DPP AL+
Sbjct: 425 NEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALDD 484
Query: 451 AGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYA 510
G LT +G M+EFP+DP+L+K +++ ++ CS+EI++I AML V F RP + + A
Sbjct: 485 DGNLTDLGAVMSEFPLDPQLAKMLIASCQHNCSNEILSITAMLSVPQC-FVRPNEAKKAA 543
Query: 511 DNARMNF-HLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLF 569
D A+M F H+ GD + LL VY+ +++ + WC EN+I S+K A ++R QL +
Sbjct: 544 DEAKMRFAHID--GDHLTLLNVYHAFKQSSEDPNWCYENFINFRSLKSADNVRQQLARIM 601
Query: 570 ARVEI 574
R +
Sbjct: 602 DRFNL 606
>UNIPROTKB|Q17R09 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K12815
EMBL:BC118085 IPI:IPI00690755 RefSeq:NP_001069266.1
UniGene:Bt.42896 ProteinModelPortal:Q17R09 STRING:Q17R09
PRIDE:Q17R09 GeneID:520046 KEGG:bta:520046 CTD:9785
NextBio:20873012 Uniprot:Q17R09
Length = 1227
Score = 1228 (437.3 bits), Expect = 5.5e-125, P = 5.5e-125
Identities = 262/582 (45%), Positives = 378/582 (64%)
Query: 9 KQQREKCTFEIEDKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTLPIYP 68
K++ E ED VD+ +E F D+ + +SE ++ K ++ E+R+ LPI+
Sbjct: 482 KKEEEPDKSLTEDGKVDYRTEQKF-ADHMKK-KSEASSEFAKKKSI---LEQRQYLPIFA 536
Query: 69 FWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE-------------PRWVAAMSVAAR 115
+ELL + ++ +VGETGSGKTTQ+ QYL+E PR VAAMSVA R
Sbjct: 537 VQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKR 596
Query: 116 VSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQE 175
VS+EMG LG EVGY+IRFEDCTS+ T++KYMTD +LLRE + E L+ YS +I+DEA E
Sbjct: 597 VSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAIIMDEAHE 656
Query: 176 RTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFYT 235
R+L+TD LFGLL++++ R DLKL+++SAT+DAEKF+ +FG+ PIF IPGR +PV++ ++
Sbjct: 657 RSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPVDILFS 716
Query: 236 KAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELII 295
K P+ DY+EAA+ +LQ+H++ GDIL+F+ GQ++IE + + + L A L +
Sbjct: 717 KTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPA-LAV 775
Query: 296 CPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKT 355
PIY+ LP++LQAKIF+ P+ RK ++ATNIAETSLT+DGI +VI G+ K+K +NP+
Sbjct: 776 LPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRI 835
Query: 356 GMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIWMTILC---QKYN--ELI 410
GM++L + PIS+A+ANQR+G + RTGPG+CFRLYT Y +T Q+ N ++
Sbjct: 836 GMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVV 895
Query: 411 WKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKL 470
+ SL L+ F F+DPP GAL+ G LT GR M EFP+DP L
Sbjct: 896 LLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPAL 955
Query: 471 SKT-IVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALL 529
SK IVS D CS EI+ I +ML V +IFYRPK ++ +D R F + + D ++ L
Sbjct: 956 SKMLIVSCDM-GCSSEILLIVSMLSVP-AIFYRPKGREEESDQIREKFAVPE-SDHLSYL 1012
Query: 530 RVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFAR 571
VY W+ NYST WC +++I +M++ R++R QL+ + +
Sbjct: 1013 NVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQ 1054
>UNIPROTKB|F1S3A8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104877 EMBL:CU914723
Ensembl:ENSSSCT00000003045 OMA:IATIPEI Uniprot:F1S3A8
Length = 766
Score = 1227 (437.0 bits), Expect = 7.0e-125, P = 7.0e-125
Identities = 262/582 (45%), Positives = 377/582 (64%)
Query: 9 KQQREKCTFEIEDKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTLPIYP 68
K++ E ED VD+ +E F D+ + +SE ++ K ++ E+R+ LPI+
Sbjct: 21 KKEEEPDKALTEDGKVDYRTEQKF-ADHMKK-KSEASSEFAKKKSI---LEQRQYLPIFA 75
Query: 69 FWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE-------------PRWVAAMSVAAR 115
+ELL + ++ +VGETGSGKTTQ+ QYL+E PR VAAMSVA R
Sbjct: 76 VQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKR 135
Query: 116 VSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQE 175
VS+EMG LG EVGY+IRFEDCTS+ T++KYMTD +LLRE + E L+ YS +I+DEA E
Sbjct: 136 VSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAIIMDEAHE 195
Query: 176 RTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFYT 235
R+L+TD LFGLL++++ R DLKL+++SAT+DAEKF+ +FG+ PIF IPGR +PV++ ++
Sbjct: 196 RSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPVDILFS 255
Query: 236 KAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELII 295
K P+ DY+EAA+ +LQ+H++ GDIL+F+ GQ++IE + + + L A L +
Sbjct: 256 KTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPA-LAV 314
Query: 296 CPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKT 355
PIY+ LP++LQAKIF+ P+ RK ++ATNIAETSLT+DGI +VI G+ K+K +NP+
Sbjct: 315 LPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRI 374
Query: 356 GMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIWMTILC---QKYN--ELI 410
GM++L + PIS+A+ANQR+G + RTGPG+CFRLYT Y +T Q+ N ++
Sbjct: 375 GMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVV 434
Query: 411 WKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKL 470
+ SL L+ F F+DPP GAL+ G LT GR M EFP+DP L
Sbjct: 435 LLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPAL 494
Query: 471 SKT-IVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALL 529
SK IVS D CS EI+ I +ML V +IFYRPK ++ +D R F + + D + L
Sbjct: 495 SKMLIVSCDM-GCSSEILLIVSMLSVP-AIFYRPKGREEESDQIREKFAVPE-SDHLTYL 551
Query: 530 RVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFAR 571
VY W+ NYST WC +++I +M++ R++R QL+ + +
Sbjct: 552 NVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQ 593
>UNIPROTKB|Q92620 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AC004682
GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH471166 Reactome:REACT_1788
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78
HOVERGEN:HBG039428 KO:K12815 OMA:PSRSTWE CTD:9785 EMBL:AF038391
EMBL:D86977 EMBL:BC004235 EMBL:BC008340 IPI:IPI00294211
RefSeq:NP_054722.2 UniGene:Hs.151218 ProteinModelPortal:Q92620
SMR:Q92620 IntAct:Q92620 STRING:Q92620 PhosphoSite:Q92620
DMDM:85700389 PaxDb:Q92620 PeptideAtlas:Q92620 PRIDE:Q92620
DNASU:9785 Ensembl:ENST00000268482 GeneID:9785 KEGG:hsa:9785
UCSC:uc002fcb.3 GeneCards:GC16P072127 HGNC:HGNC:17211 HPA:HPA041347
MIM:605584 neXtProt:NX_Q92620 PharmGKB:PA27225 InParanoid:Q92620
OrthoDB:EOG4Z62MS PhylomeDB:Q92620 ChiTaRS:DHX38 GenomeRNAi:9785
NextBio:36846 ArrayExpress:Q92620 Bgee:Q92620 CleanEx:HS_DHX38
Genevestigator:Q92620 GermOnline:ENSG00000140829 Uniprot:Q92620
Length = 1227
Score = 1225 (436.3 bits), Expect = 1.1e-124, P = 1.1e-124
Identities = 262/582 (45%), Positives = 376/582 (64%)
Query: 9 KQQREKCTFEIEDKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTLPIYP 68
K++ E ED VD+ +E F D+ +SE ++ K ++ E+R+ LPI+
Sbjct: 482 KKEEEPDKAVTEDGKVDYRTEQKF-ADHMKR-KSEASSEFAKKKSI---LEQRQYLPIFA 536
Query: 69 FWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE-------------PRWVAAMSVAAR 115
+ELL + ++ +VGETGSGKTTQ+ QYL+E PR VAAMSVA R
Sbjct: 537 VQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKR 596
Query: 116 VSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQE 175
VS+EMG LG EVGY+IRFEDCTS+ T++KYMTD +LLRE + E L+ YS +I+DEA E
Sbjct: 597 VSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAIIMDEAHE 656
Query: 176 RTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFYT 235
R+L+TD LFGLL++++ R DLKL+++SAT+DAEKF+ +FG+ PIF IPGR +PV++ ++
Sbjct: 657 RSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPGRTFPVDILFS 716
Query: 236 KAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELII 295
K P+ DY+EAA+ +LQ+H++ GDIL+F+ GQ++IE + + + L A L +
Sbjct: 717 KTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPA-LAV 775
Query: 296 CPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKT 355
PIY+ LP++LQAKIF+ P+ RK ++ATNIAETSLT+DGI +VI G+ K+K +NP+
Sbjct: 776 LPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRI 835
Query: 356 GMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIWMTILC---QKYN--ELI 410
GM++L + PIS+A+ANQR+G + RTGPG+CFRLYT Y +T Q+ N ++
Sbjct: 836 GMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVV 895
Query: 411 WKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKL 470
+ SL L+ F F+DPP GAL+ G LT GR M EFP+DP L
Sbjct: 896 LLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPAL 955
Query: 471 SKT-IVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALL 529
SK IVS D CS EI+ I +ML V +IFYRPK ++ +D R F + + D + L
Sbjct: 956 SKMLIVSCDM-GCSSEILLIVSMLSVP-AIFYRPKGREEESDQIREKFAVPE-SDHLTYL 1012
Query: 530 RVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFAR 571
VY W+ NYST WC +++I +M++ R++R QL+ + +
Sbjct: 1013 NVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQ 1054
>WB|WBGene00003389 [details] [associations]
symbol:mog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570 PIR:S41025
RefSeq:NP_499212.1 UniGene:Cel.5743 ProteinModelPortal:P34498
SMR:P34498 IntAct:P34498 STRING:P34498 PaxDb:P34498 PRIDE:P34498
EnsemblMetazoa:K03H1.2 GeneID:176409 KEGG:cel:CELE_K03H1.2
UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 1225 (436.3 bits), Expect = 1.1e-124, P = 1.1e-124
Identities = 253/557 (45%), Positives = 374/557 (67%)
Query: 39 EFESELP-NKSVVKSTLEM-LQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQ 96
+F S + N++V +E ++++R+ LP++ ++++ + V+ IVGETGSGKTTQ
Sbjct: 414 QFASHMKDNEAVSDFAMEKSIKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQ 473
Query: 97 IPQYLYE-------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTV 143
+ QYL E PR VAAMSVA RV+ EMGV LG +VGY+IRFEDCTS+KT+
Sbjct: 474 LAQYLLEDGFGDSGLIGCTQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTI 533
Query: 144 LKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISS 203
+KYMTD +LLRE + + SL+ YS +I+DEA ER+L+TD LFGLL+++I R DLKL+++S
Sbjct: 534 IKYMTDGILLRECLGDGSLDQYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTS 593
Query: 204 ATLDAEKFSDYFG-SAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDI 262
AT+DA+KF+D+FG + P F IPGR +PVELF+ + P DY++AA+ A+ IH+ GDI
Sbjct: 594 ATMDADKFADFFGGNCPTFTIPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDI 653
Query: 263 LVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVV 322
L+F+ GQ++IE E++K++ L + L + PIY+ LP++LQAKIF+ P RK +
Sbjct: 654 LIFMPGQEDIECTCEMIKEKLGELD-EAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRKAI 712
Query: 323 LATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGP 382
+ATNIAETSLT+DGI +VI PGF K+K YNP+ GM++L + P+S+ASANQRTG + RTGP
Sbjct: 713 VATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGP 772
Query: 383 GKCFRLYTLHNY--HRIWMTIL-CQKYN--ELIWKMLSLFSNVLVNFDFIDPPXXXXXXX 437
G+C+RLYT + + T+ Q+ N ++ + SL + L+ F F+D P
Sbjct: 773 GQCYRLYTERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQDNMLN 832
Query: 438 XXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGN 497
GAL+ GQLT +GR+M EFP+DP LSK ++ + CSDE++TI +ML V
Sbjct: 833 SMYQLWTLGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVP- 891
Query: 498 SIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKR 557
+IF+RPK ++ AD + F + + D + L VY WR YS +WC +NY+ V ++K+
Sbjct: 892 AIFFRPKGREEEADAKKEKFQVPE-SDHLTFLNVYIQWRTHKYSAKWCADNYLHVKALKK 950
Query: 558 ARDIRDQLEGLFARVEI 574
R++R QL+ + +++
Sbjct: 951 VREVRAQLKEIMQDLKL 967
>UNIPROTKB|P34498 [details] [associations]
symbol:mog-1 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0010171
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570
PIR:S41025 RefSeq:NP_499212.1 UniGene:Cel.5743
ProteinModelPortal:P34498 SMR:P34498 IntAct:P34498 STRING:P34498
PaxDb:P34498 PRIDE:P34498 EnsemblMetazoa:K03H1.2 GeneID:176409
KEGG:cel:CELE_K03H1.2 UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 1225 (436.3 bits), Expect = 1.1e-124, P = 1.1e-124
Identities = 253/557 (45%), Positives = 374/557 (67%)
Query: 39 EFESELP-NKSVVKSTLEM-LQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQ 96
+F S + N++V +E ++++R+ LP++ ++++ + V+ IVGETGSGKTTQ
Sbjct: 414 QFASHMKDNEAVSDFAMEKSIKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQ 473
Query: 97 IPQYLYE-------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTV 143
+ QYL E PR VAAMSVA RV+ EMGV LG +VGY+IRFEDCTS+KT+
Sbjct: 474 LAQYLLEDGFGDSGLIGCTQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTI 533
Query: 144 LKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISS 203
+KYMTD +LLRE + + SL+ YS +I+DEA ER+L+TD LFGLL+++I R DLKL+++S
Sbjct: 534 IKYMTDGILLRECLGDGSLDQYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTS 593
Query: 204 ATLDAEKFSDYFG-SAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDI 262
AT+DA+KF+D+FG + P F IPGR +PVELF+ + P DY++AA+ A+ IH+ GDI
Sbjct: 594 ATMDADKFADFFGGNCPTFTIPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDI 653
Query: 263 LVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVV 322
L+F+ GQ++IE E++K++ L + L + PIY+ LP++LQAKIF+ P RK +
Sbjct: 654 LIFMPGQEDIECTCEMIKEKLGELD-EAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRKAI 712
Query: 323 LATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGP 382
+ATNIAETSLT+DGI +VI PGF K+K YNP+ GM++L + P+S+ASANQRTG + RTGP
Sbjct: 713 VATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGP 772
Query: 383 GKCFRLYTLHNY--HRIWMTIL-CQKYN--ELIWKMLSLFSNVLVNFDFIDPPXXXXXXX 437
G+C+RLYT + + T+ Q+ N ++ + SL + L+ F F+D P
Sbjct: 773 GQCYRLYTERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQDNMLN 832
Query: 438 XXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGN 497
GAL+ GQLT +GR+M EFP+DP LSK ++ + CSDE++TI +ML V
Sbjct: 833 SMYQLWTLGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVP- 891
Query: 498 SIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKR 557
+IF+RPK ++ AD + F + + D + L VY WR YS +WC +NY+ V ++K+
Sbjct: 892 AIFFRPKGREEEADAKKEKFQVPE-SDHLTFLNVYIQWRTHKYSAKWCADNYLHVKALKK 950
Query: 558 ARDIRDQLEGLFARVEI 574
R++R QL+ + +++
Sbjct: 951 VREVRAQLKEIMQDLKL 967
>UNIPROTKB|E2RC56 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 KO:K12815 OMA:PSRSTWE CTD:9785
EMBL:AAEX03004090 RefSeq:XP_536800.2 ProteinModelPortal:E2RC56
Ensembl:ENSCAFT00000032225 GeneID:479669 KEGG:cfa:479669
NextBio:20854813 Uniprot:E2RC56
Length = 1226
Score = 1224 (435.9 bits), Expect = 1.5e-124, P = 1.5e-124
Identities = 262/582 (45%), Positives = 377/582 (64%)
Query: 9 KQQREKCTFEIEDKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTLPIYP 68
K++ E ED VD+ +E F D+ + +SE ++ K ++ E+R+ LPI+
Sbjct: 481 KKEEEPDKALTEDGKVDYRTEQKF-ADHMKK-KSEASSEFAKKKSI---LEQRQYLPIFA 535
Query: 69 FWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE-------------PRWVAAMSVAAR 115
+ELL + ++ +VGETGSGKTTQ+ QYL+E PR VAAMSVA R
Sbjct: 536 VQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKR 595
Query: 116 VSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQE 175
VS+EMG LG EVGY+IRFEDCTS+ T++KYMTD +LLRE + E L+ YS +I+DEA E
Sbjct: 596 VSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAVIMDEAHE 655
Query: 176 RTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFYT 235
R+L+TD LFGLL++++ R DLKL+++SAT+DAEKF+ +FG+ PIF IPGR +PV++ ++
Sbjct: 656 RSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPGRTFPVDILFS 715
Query: 236 KAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELII 295
K P+ DY+EAA+ +LQ+H++ GDIL+F+ GQ++IE + + + L A L +
Sbjct: 716 KTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPA-LAV 774
Query: 296 CPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKT 355
PIY+ LP++LQAKIF+ P+ RK ++ATNIAETSLT+DGI +VI G+ K+K +NP+
Sbjct: 775 LPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRI 834
Query: 356 GMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIWMTILC---QKYN--ELI 410
GM++L + PIS+A+ANQR+G + RTGPG+CFRLYT Y +T Q+ N ++
Sbjct: 835 GMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVV 894
Query: 411 WKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKL 470
+ SL L+ F F+DPP GAL+ G LT GR M EFP+DP L
Sbjct: 895 LLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPAL 954
Query: 471 SKT-IVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALL 529
SK IVS D CS EI+ I +ML V +IFYRPK ++ +D R F + + D + L
Sbjct: 955 SKMLIVSCDM-GCSSEILLIVSMLSVP-AIFYRPKGREEESDQIREKFAVPE-SDHLTYL 1011
Query: 530 RVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFAR 571
VY W+ NYST WC +++I +M++ R++R QL+ + +
Sbjct: 1012 NVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQ 1053
>RGD|1310345 [details] [associations]
symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box polypeptide 38"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310345
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OrthoDB:EOG4Z62MS
IPI:IPI00371467 PRIDE:D4A321 Ensembl:ENSRNOT00000019810
UCSC:RGD:1310345 Uniprot:D4A321
Length = 1228
Score = 1224 (435.9 bits), Expect = 1.5e-124, P = 1.5e-124
Identities = 261/582 (44%), Positives = 377/582 (64%)
Query: 9 KQQREKCTFEIEDKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTLPIYP 68
K++ E ED VD+ +E F D+ E +SE ++ K ++ E+R+ LPI+
Sbjct: 483 KKEEEPDKAMTEDGKVDYRTEQKF-ADHMKE-KSEASSEFAKKKSI---LEQRQYLPIFA 537
Query: 69 FWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE-------------PRWVAAMSVAAR 115
+ELL + ++ +VGETGSGKTTQ+ QYL++ PR VAAMSVA R
Sbjct: 538 VQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHQDGYTDYGMIGCTQPRRVAAMSVAKR 597
Query: 116 VSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQE 175
VS+EMG LG EVGY+IRFEDCTS+ T++KYMTD +LLRE + E L+ YS +I+DEA E
Sbjct: 598 VSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAIIMDEAHE 657
Query: 176 RTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFYT 235
R+L+TD LFGLL++++ R DLKL+++SAT+DA+KF+ +FG+ PIF IPGR +PV++ ++
Sbjct: 658 RSLNTDVLFGLLREVVARRSDLKLIVTSATMDADKFAAFFGNVPIFHIPGRTFPVDILFS 717
Query: 236 KAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELII 295
K P+ DY+EAA+ +LQ+H++ GDIL+F+ GQ++IE + + + L A L +
Sbjct: 718 KTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPA-LAV 776
Query: 296 CPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKT 355
PIY+ LP++LQAKIF+ P+ RK ++ATNIAETSLT+DGI +VI G+ K+K +NP+
Sbjct: 777 LPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRI 836
Query: 356 GMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIWMTILC---QKYN--ELI 410
GM++L + PIS+A+ANQR+G + RTGPG+CFRLYT Y +T Q+ N ++
Sbjct: 837 GMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVV 896
Query: 411 WKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKL 470
+ SL L+ F F+DPP GAL+ G LT GR M EFP+DP L
Sbjct: 897 LLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPAL 956
Query: 471 SKT-IVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALL 529
SK IVS D CS EI+ I +ML V +IFYRPK ++ +D R F + + D + L
Sbjct: 957 SKMLIVSCDM-GCSSEILLIVSMLSVP-AIFYRPKGREEESDQIREKFAVPE-SDHLTYL 1013
Query: 530 RVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFAR 571
VY W+ NYST WC +++I +M++ R++R QL+ + +
Sbjct: 1014 NVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQ 1055
>ZFIN|ZDB-GENE-040426-1144 [details] [associations]
symbol:dhx38 "DEAH (Asp-Glu-Ala-His) box
polypeptide 38" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-040426-1144 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 KO:K12815 CTD:9785 OrthoDB:EOG4Z62MS
EMBL:BC063744 IPI:IPI00493120 RefSeq:NP_957170.1 UniGene:Dr.38854
ProteinModelPortal:Q6P404 STRING:Q6P404 PRIDE:Q6P404 GeneID:393850
KEGG:dre:393850 NextBio:20814835 ArrayExpress:Q6P404 Bgee:Q6P404
Uniprot:Q6P404
Length = 1258
Score = 1223 (435.6 bits), Expect = 1.9e-124, P = 1.9e-124
Identities = 260/575 (45%), Positives = 376/575 (65%)
Query: 20 EDKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSG 79
ED VD+ +E F D+ E +SE + K TL E+R+ LPI+ ++LL +
Sbjct: 524 EDGKVDYRAEQKF-ADHMKE-KSEASSDFAKKKTL---LEQRQYLPIFAVRQQLLNIIRD 578
Query: 80 YPVLAIVGETGSGKTTQIPQYLYE-------------PRWVAAMSVAARVSQEMGVKLGH 126
++ +VGETGSGKTTQ+ QYL+E PR VAAMSVA RVS+EM LG
Sbjct: 579 NNIVIVVGETGSGKTTQLTQYLHEDGYTSYGMVGCTQPRRVAAMSVAKRVSEEMNSNLGE 638
Query: 127 EVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGL 186
EVGY+IRFEDCTS+KT++KYMTD +LLRE + E L+ YS +I+DEA ER+L+TD LFGL
Sbjct: 639 EVGYAIRFEDCTSEKTMIKYMTDGILLRESLRESDLDHYSAVIMDEAHERSLNTDVLFGL 698
Query: 187 LKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAA 246
L+++++ R DLKL+++SAT+D++KF+ +FG+ PIF IPGR +PV++ ++K P+ DY+EAA
Sbjct: 699 LREVVSRRSDLKLIVTSATMDSDKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAA 758
Query: 247 IVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTEL 306
+ ALQIH++ GDIL+F+ GQ++IE + + +R L A L + PIY+ LP++L
Sbjct: 759 VKQALQIHLSGMVGDILIFMPGQEDIEVTSDQIVERLADLENAPA-LAVLPIYSQLPSDL 817
Query: 307 QAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPIS 366
QAKIF+ P+ RK ++ATNIAETSLT+DGI +V+ G+ K+K +NP+ GM++L V PIS
Sbjct: 818 QAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVVDSGYCKLKVFNPRIGMDALQVYPIS 877
Query: 367 KASANQRTGLSERTGPGKCFRLYTLHNYHRIWMTILC---QKYN--ELIWKMLSLFSNVL 421
+A+ANQR G + RTGPG+C+RLYT + +T Q+ N ++ + SL L
Sbjct: 878 QANANQRAGRAGRTGPGQCYRLYTQSAFKNEMLTTTIPEIQRTNLANVVLLLKSLGVQDL 937
Query: 422 VNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKT-IVSLDKY 480
+ F F+DPP GAL+ G LT GR M EFP+DP LSK IVS D
Sbjct: 938 LLFHFMDPPPEDNMLNSMYQLWILGALDNTGALTPTGRLMVEFPLDPALSKMLIVSCDM- 996
Query: 481 KCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNY 540
CS +I+ I +ML V SIFYRPK ++ +D R F + + D + L VY W+ NY
Sbjct: 997 SCSADILIIVSMLSVP-SIFYRPKGREEESDQVREKFSVPE-SDHLTYLNVYLQWKNNNY 1054
Query: 541 STEWCRENYIQVSSMKRARDIRDQLEGLFARVEID 575
S+ WC +++I +M++ R++R QL+ + + +++
Sbjct: 1055 SSIWCNDHFIHTKAMRKVREVRAQLKDIMVQQKMN 1089
>UNIPROTKB|G4MTU4 [details] [associations]
symbol:MGG_11351 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp16" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12815 RefSeq:XP_003713740.1 EnsemblFungi:MGG_11351T0
GeneID:5051310 KEGG:mgr:MGG_11351 Uniprot:G4MTU4
Length = 999
Score = 1216 (433.1 bits), Expect = 1.0e-123, P = 1.0e-123
Identities = 252/560 (45%), Positives = 370/560 (66%)
Query: 35 DN-FDEFESELPNKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGK 93
DN F E + S T + ++E+R+ LP + E+L++ + V+ +VGETGSGK
Sbjct: 274 DNKFSEHMKKNDGASNFSQT-KSIREQREFLPAFAVREDLMRVIRDNQVIIVVGETGSGK 332
Query: 94 TTQIPQYLYE-------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSD 140
TTQ+ Q+LYE PR VAAMSVA RVS+EM VKLG VGY+IRFEDCTS
Sbjct: 333 TTQLTQFLYEDGYGQLGMIGCTQPRRVAAMSVAKRVSEEMEVKLGGTVGYAIRFEDCTSK 392
Query: 141 KTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLL 200
TV+KYMTD +LLRE + EP L+ YS +I+DEA ER L+TD L GL K ++ R DLKL+
Sbjct: 393 DTVIKYMTDGVLLRESLNEPDLDRYSCIIMDEAHERALNTDVLMGLFKKILQRRRDLKLI 452
Query: 201 ISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTG 260
++SAT++A++FSD+FG AP F IPGR +PV++ ++++P DY++ A+ L IHV+ TG
Sbjct: 453 VTSATMNAKRFSDFFGGAPDFTIPGRTFPVDVMFSRSPVEDYVDQAVQQVLNIHVSMGTG 512
Query: 261 DILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARK 320
DILVF+TGQ++IE E++++R L +L I PIY+ +P +LQAKIF+ P RK
Sbjct: 513 DILVFMTGQEDIEVTCELVRERLDALNDP-PKLSILPIYSQMPADLQAKIFDRAPPGVRK 571
Query: 321 VVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERT 380
++ATNIAETSLT+DGI YV+ G++K+K YNPK GM++L + PIS+A+A+QR+G + RT
Sbjct: 572 CIVATNIAETSLTVDGIMYVVDAGYSKLKVYNPKMGMDTLQITPISQANASQRSGRAGRT 631
Query: 381 GPGKCFRLYTLHNYH-RIWMTIL--CQKYN--ELIWKMLSLFSNVLVNFDFIDPPXXXXX 435
GPGK FRL+T + +++ + Q+ N I + SL +++FDF+DPP
Sbjct: 632 GPGKAFRLFTEKAFKDELYIQTIPEIQRTNLSNTILLIKSLGVKDMLDFDFMDPPPQDTM 691
Query: 436 XXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFV 495
GAL+ G +T +GR+M FP+DP L+K I+ ++Y C++E+ITI +ML V
Sbjct: 692 TTSLFDLWALGALDNLGDMTDLGRKMNFFPMDPPLAKLIIMAEEYGCTEEMITIVSMLSV 751
Query: 496 GNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSM 555
N +FYRPK++Q +D AR F + + D + L VY+ W+ +S WC +++ S+
Sbjct: 752 PN-VFYRPKERQEESDAAREKFFVPE-SDHLTFLHVYSQWKANGHSDAWCSRHFLHSKSL 809
Query: 556 KRARDIRDQLEGLFARVEID 575
+RA+++RDQL + ++D
Sbjct: 810 RRAKEVRDQLLDIMKTQKMD 829
>ASPGD|ASPL0000014477 [details] [associations]
symbol:AN4032 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:BN001302
EMBL:AACD01000065 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12815 OMA:PSRSTWE OrthoDB:EOG4GQTD2
RefSeq:XP_661636.1 EnsemblFungi:CADANIAT00004650 GeneID:2873454
KEGG:ani:AN4032.2 Uniprot:Q5B5Z8
Length = 924
Score = 1208 (430.3 bits), Expect = 7.2e-123, P = 7.2e-123
Identities = 254/563 (45%), Positives = 369/563 (65%)
Query: 29 ESVFDGDN-FDEF---ESELPNKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLA 84
E V+ G N F + E S KS + L+E+R+ LP + E+LL+ + V+
Sbjct: 151 EEVYKGGNKFAHHMKKQDEGGQSSFSKS--KTLREQREFLPAFAVREDLLRVIRDNQVVV 208
Query: 85 IVGETGSGKTTQIPQYLYE-------------PRWVAAMSVAARVSQEMGVKLGHEVGYS 131
+VGETGSGKTTQ+ Q+LYE PR VAAMSVA RVS+EM V LG VGY+
Sbjct: 209 VVGETGSGKTTQLTQFLYEDGYAKFGMIGCTQPRRVAAMSVAKRVSEEMEVDLGDLVGYA 268
Query: 132 IRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLI 191
IRFEDCT T +KYMTD +LLRE +++ L+ YS +I+DEA ER L+TD L GLLK ++
Sbjct: 269 IRFEDCTGPNTAIKYMTDGVLLRESLVQTDLDKYSCIIMDEAHERALNTDVLMGLLKKIL 328
Query: 192 NYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTAL 251
R DLKL+++SAT++AE+FS +FG AP F IPGR +PV++ +++ P DY+++A+ L
Sbjct: 329 ARRRDLKLIVTSATMNAERFSRFFGGAPEFIIPGRTFPVDVHFSRTPCEDYVDSAVKQVL 388
Query: 252 QIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIF 311
IHV++ GDILVF+TGQ++IE E++ +R + L +L I PIY+ +P E QAKIF
Sbjct: 389 AIHVSQGPGDILVFMTGQEDIEATCELVDERLKLLNDP-PKLSILPIYSQMPAEQQAKIF 447
Query: 312 EPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASAN 371
E RKV++ATNIAETSLT+DGI +V+ G++K+K YNPK GM++L + PIS+A+AN
Sbjct: 448 ERAAPGVRKVIVATNIAETSLTVDGIMFVVDSGYSKLKVYNPKMGMDTLQITPISQANAN 507
Query: 372 QRTGLSERTGPGKCFRLYTLHNY-HRIWMTILCQ----KYNELIWKMLSLFSNVLVNFDF 426
QR+G + RTGPGK +RLYT Y + +++ + + + + + SL L++FDF
Sbjct: 508 QRSGRAGRTGPGKAYRLYTEVAYKNEMYLQTIPEIQRTSLSNTVLLLKSLGVKDLLDFDF 567
Query: 427 IDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSL-DKYKCSDE 485
+DPP GAL+ G LT +GRQM FP+DP L+K I++ ++Y CS+E
Sbjct: 568 MDPPPQETISTSLFELWSLGALDNLGDLTHLGRQMTPFPMDPPLAKLIITAAEQYGCSEE 627
Query: 486 IITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWC 545
++TI +ML V N +FYRPK++Q +D AR F + + D + LL VY W+ YS WC
Sbjct: 628 MLTIVSMLSVPN-VFYRPKERQEESDAAREKFFVPE-SDHLTLLHVYTQWKSNGYSDHWC 685
Query: 546 RENYIQVSSMKRARDIRDQLEGL 568
++++ +++RA+++RDQL +
Sbjct: 686 TKHFLHAKTLRRAKEVRDQLNDI 708
>DICTYBASE|DDB_G0285213 [details] [associations]
symbol:dhx15 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285213 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:AAFI02000076 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12820 OMA:TVLQIHA RefSeq:XP_638323.1
ProteinModelPortal:Q54NJ4 EnsemblProtists:DDB0233403 GeneID:8624993
KEGG:ddi:DDB_G0285213 Uniprot:Q54NJ4
Length = 727
Score = 1206 (429.6 bits), Expect = 1.2e-122, P = 1.2e-122
Identities = 255/550 (46%), Positives = 360/550 (65%)
Query: 44 LPNKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE 103
+P K + E+RK LP++ E+ ++ + V+ +VGETGSGKTTQIPQ++ +
Sbjct: 57 IPKKETFSKRYYEILEKRKELPVWKQKEDFIKVIKENQVVILVGETGSGKTTQIPQFVVD 116
Query: 104 --------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTD 149
PR VAA+SVA RVS+EM +LG EVGYSIRFE+ +S +T +KY+TD
Sbjct: 117 AGLIRPGKMVGVTQPRRVAAISVAKRVSEEMDFELGEEVGYSIRFEELSSARTFMKYLTD 176
Query: 150 CMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAE 209
MLLRE + +P+L Y V+I+DEA ERTLSTD LFGL+KD++ R DLKL++ SATL+A
Sbjct: 177 GMLLRESMSDPTLNKYDVIILDEAHERTLSTDILFGLIKDILKRRKDLKLIVMSATLEAG 236
Query: 210 KFSDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQ 269
KF YF +AP+ K+PGR +PVE+FYT+ DY+E+A+ T + IH NE TGDILVFLTG+
Sbjct: 237 KFQKYFENAPLIKVPGRLHPVEIFYTEEAAKDYLESAVRTVIDIHTNEGTGDILVFLTGE 296
Query: 270 DEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAE 329
+EIE +++ TR G + + P+Y++LP Q+KIF+ ER K +++TNIAE
Sbjct: 297 EEIEDTCAKIQRETRERG--LPPMKTLPLYSSLPIYQQSKIFDTCKER--KCIVSTNIAE 352
Query: 330 TSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLY 389
TSLTIDGI +V+ PGF+K K+YNP++ +ESLLV PISKASANQR G + RT PGKCFRLY
Sbjct: 353 TSLTIDGIVFVVDPGFSKQKTYNPRSRVESLLVAPISKASANQRAGRAGRTRPGKCFRLY 412
Query: 390 TLHNYHRIWMT-----ILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXX 444
T + + + IL ++ ++L L LV+FDF+DPP
Sbjct: 413 TEKAFKELMIQQTHPEILRSNLASVVLQLLKLGVVDLVHFDFMDPPVPDTLIRALEVLHY 472
Query: 445 XGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPK 504
GAL+ GQLT +G M+EFP+DP+LSK ++ + CS+EI+TIAAML N F RPK
Sbjct: 473 LGALDDEGQLTEIGSIMSEFPLDPQLSKMLIVSAERSCSNEILTIAAMLSAPNC-FMRPK 531
Query: 505 DKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQ 564
D +I AD+A+ +F D GD + +L VY+ +++ WC +N++ ++K+A +R Q
Sbjct: 532 DNRIEADSAKKSFDHFD-GDHLTMLNVYHSFKKNGEDPTWCYDNFLNHRAIKQADSVRSQ 590
Query: 565 LEGLFARVEI 574
L + R ++
Sbjct: 591 LARILTRFKL 600
>FB|FBgn0026713 [details] [associations]
symbol:l(1)G0007 "lethal (1) G0007" species:7227 "Drosophila
melanogaster" [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0002121 "inter-male
aggressive behavior" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0002121
GO:GO:0007476 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0000381 KO:K12815 GeneTree:ENSGT00700000104877 OMA:PSRSTWE
UniGene:Dm.4249 GeneID:32373 KEGG:dme:Dmel_CG32604
FlyBase:FBgn0026713 ChiTaRS:l(1)G0007 GenomeRNAi:32373
NextBio:778160 EMBL:AY058553 RefSeq:NP_572947.1 SMR:Q9VY54
MINT:MINT-334469 STRING:Q9VY54 EnsemblMetazoa:FBtr0073900
UCSC:CG32604-RA InParanoid:Q9VY54 Uniprot:Q9VY54
Length = 1222
Score = 1206 (429.6 bits), Expect = 1.2e-122, P = 1.2e-122
Identities = 257/582 (44%), Positives = 374/582 (64%)
Query: 10 QQREKCTFEIEDKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTLPIYPF 69
Q + F+ E D+ + F D+ + + KS S + + E+R+ LP++
Sbjct: 484 QDEDDMRFDKEKDKADYRKDQKF-ADHMRD--QDTGGKSDF-SRKKTISEQRRFLPVFAS 539
Query: 70 WEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE-------------PRWVAAMSVAARV 116
+ELL + V+ IVGETGSGKTTQ+ QYL+E PR VAAMSVA RV
Sbjct: 540 RQELLNVIRENSVIIIVGETGSGKTTQLTQYLHEDGYSKRGMIGCTQPRRVAAMSVAKRV 599
Query: 117 SQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQER 176
S EM +LG +VGY+IRFEDCTS++TV+KYMTD +LLRE + +P L+SYS +I+DEA ER
Sbjct: 600 SDEMDTQLGEDVGYAIRFEDCTSERTVIKYMTDGILLRESLRDPELDSYSAIIMDEAHER 659
Query: 177 TLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFYTK 236
+LSTD LFGLL++++ R DLKL+++SAT+D+ KF+ +FG+ P F IPGR +PV++ ++K
Sbjct: 660 SLSTDVLFGLLREIVARRHDLKLIVTSATMDSSKFATFFGNVPTFTIPGRTFPVDVMFSK 719
Query: 237 APEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIIC 296
DY+E+A+ ALQ+H+ GD+L+F+ GQ++IE E+L++R + A L I
Sbjct: 720 NTCEDYVESAVKQALQVHLTPNEGDMLIFMPGQEDIEVTCEVLEERLAEIDNAPA-LSIL 778
Query: 297 PIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTG 356
PIY+ LP++LQAKIF+ + + RK V+ATNIAETSLT+DGI YVI G+ K+K YNP+ G
Sbjct: 779 PIYSQLPSDLQAKIFQKSSDGLRKCVVATNIAETSLTVDGIIYVIDSGYCKLKVYNPRIG 838
Query: 357 MESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNY--HRIWMTIL-CQKYN----EL 409
M++L + PIS+A+ANQR+G + RTGPG+ +RLYT Y + +T+ Q+ N L
Sbjct: 839 MDALQIYPISQANANQRSGRAGRTGPGQAYRLYTQRQYKDELLALTVPEIQRTNLANTVL 898
Query: 410 IWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPK 469
+ K L + L+ F F+DPP GAL+ G LT +GRQMAEFP+DP
Sbjct: 899 LLKSLGVVD--LLQFHFMDPPPQDNILNSLYQLWILGALDHTGALTTLGRQMAEFPLDPP 956
Query: 470 LSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALL 529
+ ++ + CS E++ I +ML V SIFYRPK ++ AD R F + D + L
Sbjct: 957 QCQMLIVACRMGCSAEVLIIVSMLSVP-SIFYRPKGREDEADGVREKFQRPE-SDHLTYL 1014
Query: 530 RVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFAR 571
VY WR+ NYS+ WC E++I + +M++ R++R QL+ + +
Sbjct: 1015 NVYQQWRQNNYSSTWCNEHFIHIKAMRKVREVRQQLKDIMTQ 1056
>UNIPROTKB|F1NHI3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
GO:GO:0005689 EMBL:AADN02015408 EMBL:AADN02015409 EMBL:AADN02015410
IPI:IPI00577528 Ensembl:ENSGALT00000023259 Uniprot:F1NHI3
Length = 762
Score = 1195 (425.7 bits), Expect = 1.7e-121, P = 1.7e-121
Identities = 257/545 (47%), Positives = 349/545 (64%)
Query: 59 EERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYL--Y-------------- 102
++R LP++ + E + + +VGETGSGKTTQIPQ+ Y
Sbjct: 99 KKRLQLPVWEYKERFTDILIRHQSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVACT 158
Query: 103 EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
+PR VAAMSVA RV+ EM V LG EVGYSIRFEDC+S KT+LKYMTD MLLRE + +P L
Sbjct: 159 QPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLL 218
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFK 222
E Y V+I+DEA ERTL+TD L G+LK+++ R DLK+++ SATLDA KF YF + P+
Sbjct: 219 ERYGVIILDEAHERTLATDILMGVLKEVVRQRADLKVIVMSATLDAGKFQIYFDNCPLLT 278
Query: 223 IPGRRYPVELFYTKAPEVDYIEAAIVTALQIHV-NEPTGDILVFLTGQDEIERAEEILKQ 281
IPGR +PVE+FYT PE DY+EAAI T +QIH+ E GD+L+FLTGQ+EI+ A + +K+
Sbjct: 279 IPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKR 338
Query: 282 RTRGLGTKIAELIICPIYANLPTELQAKIFEPTPER------ARKVVLATNIAETSLTID 335
LG ++ ++ I P+Y+ LP + Q +IFEP P + RKVV++TNIAETSLTID
Sbjct: 339 EIDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTID 398
Query: 336 GIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYH 395
G+ +VI PGFAK K YNP+ +ESLLV ISKASA QR G + RT PGKCFRLYT Y
Sbjct: 399 GVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYK 458
Query: 396 -----RIWMTILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNK 450
+ IL ++ ++ L + LV+FDF+DPP ALN
Sbjct: 459 TEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALND 518
Query: 451 AGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYA 510
G LT +G MAEFP+DP+L+K +++ Y CS+E+++I AML V F RP + + A
Sbjct: 519 DGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQC-FVRPTEAKKAA 577
Query: 511 DNARMNF-HLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLF 569
D A+M F H+ GD + LL VY+ +++ + S +WC +N+I S+ A ++R QL +
Sbjct: 578 DEAKMRFAHID--GDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIM 635
Query: 570 ARVEI 574
R +
Sbjct: 636 DRFNL 640
>UNIPROTKB|A5D7D9 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
GeneTree:ENSGT00650000093246 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689
EMBL:DAAA02017121 EMBL:BC140520 IPI:IPI00709068
RefSeq:NP_001091487.1 UniGene:Bt.58909 Ensembl:ENSBTAT00000011714
GeneID:512327 KEGG:bta:512327 InParanoid:A5D7D9 NextBio:20870343
Uniprot:A5D7D9
Length = 795
Score = 1195 (425.7 bits), Expect = 1.7e-121, P = 1.7e-121
Identities = 256/545 (46%), Positives = 348/545 (63%)
Query: 59 EERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE--------------- 103
++R LP++ + + + + +VGETGSGKTTQIPQ+ E
Sbjct: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACT 191
Query: 104 -PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
PR VAAMSVA RV+ EM V LG EVGYSIRFEDC+S KT+LKYMTD MLLRE + +P L
Sbjct: 192 QPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLL 251
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFK 222
E Y V+I+DEA ERTL+TD L G+LK+++ R DLK+++ SATLDA KF YF + P+
Sbjct: 252 ERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLT 311
Query: 223 IPGRRYPVELFYTKAPEVDYIEAAIVTALQIHV-NEPTGDILVFLTGQDEIERAEEILKQ 281
IPGR +PVE+FYT PE DY+EAAI T +QIH+ E GD+L+FLTGQ+EI+ A + +K+
Sbjct: 312 IPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKR 371
Query: 282 RTRGLGTKIAELIICPIYANLPTELQAKIFEPTPER------ARKVVLATNIAETSLTID 335
LG ++ ++ I P+Y+ LP + Q +IFEP P + RKVV++TNIAETSLTID
Sbjct: 372 EVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTID 431
Query: 336 GIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYH 395
G+ +VI PGFAK K YNP+ +ESLLV ISKASA QR G + RT PGKCFRLYT Y
Sbjct: 432 GVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYK 491
Query: 396 -----RIWMTILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNK 450
+ IL ++ ++ L + LV+FDF+DPP ALN
Sbjct: 492 TEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALND 551
Query: 451 AGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYA 510
G LT +G MAEFP+DP+L+K +++ Y CS+E+++I AML V F RP + + A
Sbjct: 552 DGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQC-FVRPTEAKKAA 610
Query: 511 DNARMNF-HLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLF 569
D A+M F H+ GD + LL VY+ +++ + S +WC +N+I S+ A ++R QL +
Sbjct: 611 DEAKMRFAHID--GDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIM 668
Query: 570 ARVEI 574
R +
Sbjct: 669 DRFNL 673
>UNIPROTKB|E2R2U3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
CTD:1665 GO:GO:0005689 EMBL:AAEX03002593 EMBL:AAEX03002594
RefSeq:XP_851535.1 Ensembl:ENSCAFT00000026155 GeneID:488856
KEGG:cfa:488856 NextBio:20862139 Uniprot:E2R2U3
Length = 795
Score = 1195 (425.7 bits), Expect = 1.7e-121, P = 1.7e-121
Identities = 256/545 (46%), Positives = 348/545 (63%)
Query: 59 EERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE--------------- 103
++R LP++ + + + + +VGETGSGKTTQIPQ+ E
Sbjct: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACT 191
Query: 104 -PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
PR VAAMSVA RV+ EM V LG EVGYSIRFEDC+S KT+LKYMTD MLLRE + +P L
Sbjct: 192 QPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLL 251
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFK 222
E Y V+I+DEA ERTL+TD L G+LK+++ R DLK+++ SATLDA KF YF + P+
Sbjct: 252 ERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLT 311
Query: 223 IPGRRYPVELFYTKAPEVDYIEAAIVTALQIHV-NEPTGDILVFLTGQDEIERAEEILKQ 281
IPGR +PVE+FYT PE DY+EAAI T +QIH+ E GD+L+FLTGQ+EI+ A + +K+
Sbjct: 312 IPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKR 371
Query: 282 RTRGLGTKIAELIICPIYANLPTELQAKIFEPTPER------ARKVVLATNIAETSLTID 335
LG ++ ++ I P+Y+ LP + Q +IFEP P + RKVV++TNIAETSLTID
Sbjct: 372 EVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTID 431
Query: 336 GIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYH 395
G+ +VI PGFAK K YNP+ +ESLLV ISKASA QR G + RT PGKCFRLYT Y
Sbjct: 432 GVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYK 491
Query: 396 -----RIWMTILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNK 450
+ IL ++ ++ L + LV+FDF+DPP ALN
Sbjct: 492 TEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALND 551
Query: 451 AGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYA 510
G LT +G MAEFP+DP+L+K +++ Y CS+E+++I AML V F RP + + A
Sbjct: 552 DGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQC-FVRPTEAKKAA 610
Query: 511 DNARMNF-HLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLF 569
D A+M F H+ GD + LL VY+ +++ + S +WC +N+I S+ A ++R QL +
Sbjct: 611 DEAKMRFAHID--GDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIM 668
Query: 570 ARVEI 574
R +
Sbjct: 669 DRFNL 673
>UNIPROTKB|O43143 [details] [associations]
symbol:DHX15 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX15" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0008380 "RNA splicing" evidence=IC]
[GO:0005689 "U12-type spliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 EMBL:AB001636 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0003724
KO:K12820 OMA:TVLQIHA EMBL:AF279891 EMBL:BC035974 IPI:IPI00396435
PIR:JC5785 RefSeq:NP_001349.2 UniGene:Hs.696074
ProteinModelPortal:O43143 SMR:O43143 DIP:DIP-38211N IntAct:O43143
MINT:MINT-5003827 STRING:O43143 PhosphoSite:O43143
SWISS-2DPAGE:O43143 PaxDb:O43143 PRIDE:O43143
Ensembl:ENST00000336812 GeneID:1665 KEGG:hsa:1665 UCSC:uc003gqx.3
CTD:1665 GeneCards:GC04M024519 HGNC:HGNC:2738 HPA:HPA047047
MIM:603403 neXtProt:NX_O43143 PharmGKB:PA27204 HOVERGEN:HBG039428
InParanoid:O43143 OrthoDB:EOG4K6G3N GenomeRNAi:1665 NextBio:6852
ArrayExpress:O43143 Bgee:O43143 CleanEx:HS_DHX15
Genevestigator:O43143 GermOnline:ENSG00000109606 GO:GO:0005689
Uniprot:O43143
Length = 795
Score = 1195 (425.7 bits), Expect = 1.7e-121, P = 1.7e-121
Identities = 256/545 (46%), Positives = 348/545 (63%)
Query: 59 EERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE--------------- 103
++R LP++ + + + + +VGETGSGKTTQIPQ+ E
Sbjct: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACT 191
Query: 104 -PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
PR VAAMSVA RV+ EM V LG EVGYSIRFEDC+S KT+LKYMTD MLLRE + +P L
Sbjct: 192 QPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLL 251
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFK 222
E Y V+I+DEA ERTL+TD L G+LK+++ R DLK+++ SATLDA KF YF + P+
Sbjct: 252 ERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLT 311
Query: 223 IPGRRYPVELFYTKAPEVDYIEAAIVTALQIHV-NEPTGDILVFLTGQDEIERAEEILKQ 281
IPGR +PVE+FYT PE DY+EAAI T +QIH+ E GD+L+FLTGQ+EI+ A + +K+
Sbjct: 312 IPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKR 371
Query: 282 RTRGLGTKIAELIICPIYANLPTELQAKIFEPTPER------ARKVVLATNIAETSLTID 335
LG ++ ++ I P+Y+ LP + Q +IFEP P + RKVV++TNIAETSLTID
Sbjct: 372 EVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTID 431
Query: 336 GIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYH 395
G+ +VI PGFAK K YNP+ +ESLLV ISKASA QR G + RT PGKCFRLYT Y
Sbjct: 432 GVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYK 491
Query: 396 -----RIWMTILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNK 450
+ IL ++ ++ L + LV+FDF+DPP ALN
Sbjct: 492 TEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALND 551
Query: 451 AGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYA 510
G LT +G MAEFP+DP+L+K +++ Y CS+E+++I AML V F RP + + A
Sbjct: 552 DGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQC-FVRPTEAKKAA 610
Query: 511 DNARMNF-HLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLF 569
D A+M F H+ GD + LL VY+ +++ + S +WC +N+I S+ A ++R QL +
Sbjct: 611 DEAKMRFAHID--GDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIM 668
Query: 570 ARVEI 574
R +
Sbjct: 669 DRFNL 673
>UNIPROTKB|F1S5A8 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00650000093246 OMA:TVLQIHA GO:GO:0005689
EMBL:CU633303 Ensembl:ENSSSCT00000009580 Uniprot:F1S5A8
Length = 795
Score = 1195 (425.7 bits), Expect = 1.7e-121, P = 1.7e-121
Identities = 256/545 (46%), Positives = 348/545 (63%)
Query: 59 EERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE--------------- 103
++R LP++ + + + + +VGETGSGKTTQIPQ+ E
Sbjct: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACT 191
Query: 104 -PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
PR VAAMSVA RV+ EM V LG EVGYSIRFEDC+S KT+LKYMTD MLLRE + +P L
Sbjct: 192 QPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLL 251
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFK 222
E Y V+I+DEA ERTL+TD L G+LK+++ R DLK+++ SATLDA KF YF + P+
Sbjct: 252 ERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLT 311
Query: 223 IPGRRYPVELFYTKAPEVDYIEAAIVTALQIHV-NEPTGDILVFLTGQDEIERAEEILKQ 281
IPGR +PVE+FYT PE DY+EAAI T +QIH+ E GD+L+FLTGQ+EI+ A + +K+
Sbjct: 312 IPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKR 371
Query: 282 RTRGLGTKIAELIICPIYANLPTELQAKIFEPTPER------ARKVVLATNIAETSLTID 335
LG ++ ++ I P+Y+ LP + Q +IFEP P + RKVV++TNIAETSLTID
Sbjct: 372 EVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTID 431
Query: 336 GIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYH 395
G+ +VI PGFAK K YNP+ +ESLLV ISKASA QR G + RT PGKCFRLYT Y
Sbjct: 432 GVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYK 491
Query: 396 -----RIWMTILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNK 450
+ IL ++ ++ L + LV+FDF+DPP ALN
Sbjct: 492 TEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALND 551
Query: 451 AGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYA 510
G LT +G MAEFP+DP+L+K +++ Y CS+E+++I AML V F RP + + A
Sbjct: 552 DGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQC-FVRPTEAKKAA 610
Query: 511 DNARMNF-HLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLF 569
D A+M F H+ GD + LL VY+ +++ + S +WC +N+I S+ A ++R QL +
Sbjct: 611 DEAKMRFAHID--GDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIM 668
Query: 570 ARVEI 574
R +
Sbjct: 669 DRFNL 673
>MGI|MGI:1099786 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
MGI:MGI:1099786 GO:GO:0005524 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:AF017153
EMBL:BC003745 IPI:IPI00128818 RefSeq:NP_031865.2 UniGene:Mm.993
ProteinModelPortal:O35286 SMR:O35286 STRING:O35286
PhosphoSite:O35286 PaxDb:O35286 PRIDE:O35286
Ensembl:ENSMUST00000031061 GeneID:13204 KEGG:mmu:13204
InParanoid:O35286 NextBio:283358 Bgee:O35286 CleanEx:MM_DHX15
Genevestigator:O35286 GermOnline:ENSMUSG00000029169 Uniprot:O35286
Length = 795
Score = 1195 (425.7 bits), Expect = 1.7e-121, P = 1.7e-121
Identities = 256/545 (46%), Positives = 348/545 (63%)
Query: 59 EERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE--------------- 103
++R LP++ + + + + +VGETGSGKTTQIPQ+ E
Sbjct: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACT 191
Query: 104 -PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
PR VAAMSVA RV+ EM V LG EVGYSIRFEDC+S KT+LKYMTD MLLRE + +P L
Sbjct: 192 QPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLL 251
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFK 222
E Y V+I+DEA ERTL+TD L G+LK+++ R DLK+++ SATLDA KF YF + P+
Sbjct: 252 ERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLT 311
Query: 223 IPGRRYPVELFYTKAPEVDYIEAAIVTALQIHV-NEPTGDILVFLTGQDEIERAEEILKQ 281
IPGR +PVE+FYT PE DY+EAAI T +QIH+ E GD+L+FLTGQ+EI+ A + +K+
Sbjct: 312 IPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKR 371
Query: 282 RTRGLGTKIAELIICPIYANLPTELQAKIFEPTPER------ARKVVLATNIAETSLTID 335
LG ++ ++ I P+Y+ LP + Q +IFEP P + RKVV++TNIAETSLTID
Sbjct: 372 EVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTID 431
Query: 336 GIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYH 395
G+ +VI PGFAK K YNP+ +ESLLV ISKASA QR G + RT PGKCFRLYT Y
Sbjct: 432 GVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYK 491
Query: 396 -----RIWMTILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNK 450
+ IL ++ ++ L + LV+FDF+DPP ALN
Sbjct: 492 TEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALND 551
Query: 451 AGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYA 510
G LT +G MAEFP+DP+L+K +++ Y CS+E+++I AML V F RP + + A
Sbjct: 552 DGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQC-FVRPTEAKKAA 610
Query: 511 DNARMNF-HLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLF 569
D A+M F H+ GD + LL VY+ +++ + S +WC +N+I S+ A ++R QL +
Sbjct: 611 DEAKMRFAHID--GDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIM 668
Query: 570 ARVEI 574
R +
Sbjct: 669 DRFNL 673
>RGD|1308072 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005689 "U12-type
spliceosomal complex" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 RGD:1308072 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:CH473963
IPI:IPI00361832 RefSeq:NP_001178526.1 UniGene:Rn.55597
Ensembl:ENSRNOT00000005126 GeneID:289693 KEGG:rno:289693
NextBio:630162 Uniprot:D3ZD97
Length = 795
Score = 1195 (425.7 bits), Expect = 1.7e-121, P = 1.7e-121
Identities = 256/545 (46%), Positives = 348/545 (63%)
Query: 59 EERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE--------------- 103
++R LP++ + + + + +VGETGSGKTTQIPQ+ E
Sbjct: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACT 191
Query: 104 -PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
PR VAAMSVA RV+ EM V LG EVGYSIRFEDC+S KT+LKYMTD MLLRE + +P L
Sbjct: 192 QPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLL 251
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFK 222
E Y V+I+DEA ERTL+TD L G+LK+++ R DLK+++ SATLDA KF YF + P+
Sbjct: 252 ERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLT 311
Query: 223 IPGRRYPVELFYTKAPEVDYIEAAIVTALQIHV-NEPTGDILVFLTGQDEIERAEEILKQ 281
IPGR +PVE+FYT PE DY+EAAI T +QIH+ E GD+L+FLTGQ+EI+ A + +K+
Sbjct: 312 IPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKR 371
Query: 282 RTRGLGTKIAELIICPIYANLPTELQAKIFEPTPER------ARKVVLATNIAETSLTID 335
LG ++ ++ I P+Y+ LP + Q +IFEP P + RKVV++TNIAETSLTID
Sbjct: 372 EVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTID 431
Query: 336 GIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYH 395
G+ +VI PGFAK K YNP+ +ESLLV ISKASA QR G + RT PGKCFRLYT Y
Sbjct: 432 GVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYK 491
Query: 396 -----RIWMTILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNK 450
+ IL ++ ++ L + LV+FDF+DPP ALN
Sbjct: 492 TEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALND 551
Query: 451 AGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYA 510
G LT +G MAEFP+DP+L+K +++ Y CS+E+++I AML V F RP + + A
Sbjct: 552 DGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQC-FVRPTEAKKAA 610
Query: 511 DNARMNF-HLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLF 569
D A+M F H+ GD + LL VY+ +++ + S +WC +N+I S+ A ++R QL +
Sbjct: 611 DEAKMRFAHID--GDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIM 668
Query: 570 ARVEI 574
R +
Sbjct: 669 DRFNL 673
>ZFIN|ZDB-GENE-030131-650 [details] [associations]
symbol:dhx15 "DEAH (Asp-Glu-Ala-His) box
polypeptide 15" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-650 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 EMBL:CU651678 IPI:IPI00481686
RefSeq:NP_001108613.1 UniGene:Dr.4024 Ensembl:ENSDART00000081245
GeneID:321931 KEGG:dre:321931 NextBio:20807587 Uniprot:E7F3I8
Length = 769
Score = 1191 (424.3 bits), Expect = 4.6e-121, P = 4.6e-121
Identities = 257/549 (46%), Positives = 351/549 (63%)
Query: 55 EMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE----------- 103
E+L++ R LP++ + E ++ + +VGETGSGKTTQIPQ+ +
Sbjct: 103 EILKK-RLQLPVWEYKERFNDILNRHQSFVLVGETGSGKTTQIPQWCVDMVRSLPGPKRG 161
Query: 104 -----PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVI 158
PR VAAMSVA RV+ EM V LG EVGYSIRFEDC+S KT+LKYMTD MLLRE +
Sbjct: 162 VACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMN 221
Query: 159 EPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSA 218
+P LE Y V+I+DEA ERTL+TD L G+LK+++ R DLK+++ SATLDA KF YF +
Sbjct: 222 DPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQVYFDNC 281
Query: 219 PIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHV-NEPTGDILVFLTGQDEIERAEE 277
P+ IPGR +PVE+FYT PE DY+EAAI T +QIH+ E GD+L+FLTGQ+EI+ A +
Sbjct: 282 PLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEDEGDVLLFLTGQEEIDEACK 341
Query: 278 ILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPER------ARKVVLATNIAETS 331
+K+ LG + ++ I P+Y+ LP + Q +IFEP P R RKVV++TNIAETS
Sbjct: 342 RIKREIDDLGPDVGDIKIIPLYSTLPPQQQQRIFEPPPPRKPNGAIGRKVVVSTNIAETS 401
Query: 332 LTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTL 391
LTIDG+ +VI PGFAK K YNP+ +ESLLV ISKASA QR G + RT PGKCFRLYT
Sbjct: 402 LTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTE 461
Query: 392 HNYH-----RIWMTILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXG 446
Y + IL ++ ++ L + LV+FDF+DPP
Sbjct: 462 KAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLA 521
Query: 447 ALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDK 506
ALN G LT +G MAEFP+DP+L+K +++ + CS+E+++I AML V F RP +
Sbjct: 522 ALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDFNCSNEVLSITAMLSVPQC-FVRPTEA 580
Query: 507 QIYADNARMNF-HLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQL 565
+ AD ++M F H+ GD + LL VY+ +++ + S +WC +N+I S+ A ++R QL
Sbjct: 581 KKAADESKMRFAHID--GDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQL 638
Query: 566 EGLFARVEI 574
+ R +
Sbjct: 639 SRIMDRFNL 647
>SGD|S000003088 [details] [associations]
symbol:PRP43 "RNA helicase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IMP;IDA] [GO:0000390 "spliceosomal
complex disassembly" evidence=IGI;IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=IGI] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0071014 "post-mRNA
release spliceosomal complex" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000003088
GO:GO:0005739 GO:GO:0005524 EMBL:BK006941 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0000463
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0000390 GO:GO:0000466
GO:GO:0000462 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
OrthoDB:EOG4S7NZ4 GO:GO:0071014 EMBL:U41851 EMBL:Z72642 PIR:S64130
RefSeq:NP_011395.1 PDB:2XAU PDB:3KX2 PDBsum:2XAU PDBsum:3KX2
ProteinModelPortal:P53131 SMR:P53131 DIP:DIP-5152N IntAct:P53131
MINT:MINT-497996 STRING:P53131 PaxDb:P53131 PeptideAtlas:P53131
PRIDE:P53131 EnsemblFungi:YGL120C GeneID:852757 KEGG:sce:YGL120C
CYGD:YGL120c EvolutionaryTrace:P53131 NextBio:972201
Genevestigator:P53131 GermOnline:YGL120C Uniprot:P53131
Length = 767
Score = 1169 (416.6 bits), Expect = 9.8e-119, P = 9.8e-119
Identities = 266/557 (47%), Positives = 352/557 (63%)
Query: 61 RKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLY---------------EPR 105
R+ LP++ +E L+ ++ VGETGSGKTTQIPQ++ +PR
Sbjct: 90 RRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPR 149
Query: 106 WVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESY 165
VAAMSVA RV++EM VKLG EVGYSIRFE+ TS+KT+LKYMTD MLLRE + + L Y
Sbjct: 150 RVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLSRY 209
Query: 166 SVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPG 225
S +I+DEA ERTL+TD L GLLK ++ RPDLK++I SATLDAEKF YF AP+ +PG
Sbjct: 210 SCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPG 269
Query: 226 RRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILK----Q 281
R YPVEL+YT + DY+++AI T LQIH E GDIL+FLTG+DEIE A + Q
Sbjct: 270 RTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQ 329
Query: 282 RTRGLGTKIAELIICPIYANLPTELQAKIFEPTPER-----ARKVVLATNIAETSLTIDG 336
R G L + P+Y +LP Q +IFEP PE RKVV++TNIAETSLTIDG
Sbjct: 330 LVREEGC--GPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDG 387
Query: 337 IKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHR 396
I YV+ PGF+K K YNP+ +ESLLV+PISKASA QR G + RT PGKCFRLYT + +
Sbjct: 388 IVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFQK 447
Query: 397 -----IWMTILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKA 451
+ IL + + ++ L + LV+FDF+DPP L+
Sbjct: 448 ELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNYLACLDDE 507
Query: 452 GQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRP-KDKQIYA 510
G LT +GR ++FP+DP L+ ++ +++CS EI+TI AML V N +F RP KDK+ A
Sbjct: 508 GNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIVAMLSVPN-VFIRPTKDKK-RA 565
Query: 511 DNARMNFHLGDVGDRIALLRVYNCWRE---CNYST-EWCRENYIQVSSMKRARDIRDQLE 566
D+A+ F D GD I LL VY+ ++ Y +WCR++Y+ S+ A +IR QLE
Sbjct: 566 DDAKNIFAHPD-GDHITLLNVYHAFKSDEAYEYGIHKWCRDHYLNYRSLSAADNIRSQLE 624
Query: 567 GLFAR--VEIDTSIYSN 581
L R +E++T+ Y +
Sbjct: 625 RLMNRYNLELNTTDYES 641
>POMBASE|SPBC16H5.10c [details] [associations]
symbol:prp43 "ATP-dependent RNA helicase Prp43
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000390
"spliceosomal complex disassembly" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO;ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030686 "90S preribosome"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC16H5.10c GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 GO:GO:0000390 KO:K12820 OMA:TVLQIHA
EMBL:AB027819 PIR:T39615 RefSeq:NP_595937.1
ProteinModelPortal:O42945 IntAct:O42945 STRING:O42945
EnsemblFungi:SPBC16H5.10c.1 GeneID:2540057 KEGG:spo:SPBC16H5.10c
OrthoDB:EOG4S7NZ4 NextBio:20801194 Uniprot:O42945
Length = 735
Score = 1156 (412.0 bits), Expect = 2.3e-117, P = 2.3e-117
Identities = 254/544 (46%), Positives = 341/544 (62%)
Query: 59 EERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQY-LYE-------------- 103
E R+ LP+Y EE L+ ++ VGETGSGKTTQIPQ+ LY+
Sbjct: 70 ETRRELPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLYDELPHLTNTQIACTQ 129
Query: 104 PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLE 163
PR VAAMSVA RV+ EM V LG EVGY+IRFEDC+ T+LKYMTD MLLRE + + L
Sbjct: 130 PRRVAAMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPNTLLKYMTDGMLLREAMTDHMLS 189
Query: 164 SYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKI 223
YS +I+DEA ERTL+TD L GL+K L RPDLK+++ SATLDA+KF YF AP+ +
Sbjct: 190 RYSCIILDEAHERTLATDILMGLMKRLATRRPDLKIIVMSATLDAKKFQKYFFDAPLLAV 249
Query: 224 PGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRT 283
PGR YPVE++YT+ PE DY+EAA+ T LQIHV E GDILVFLTG++EIE A +
Sbjct: 250 PGRTYPVEIYYTQEPERDYLEAALRTVLQIHVEEGPGDILVFLTGEEEIEDACRKITLEA 309
Query: 284 RGLGTKIAE--LIICPIYANLPTELQAKIFEPTPERA-----RKVVLATNIAETSLTIDG 336
L + A L + P+Y +LP Q +IFEPTPE RKVV++TNIAETSLTIDG
Sbjct: 310 DDLVREGAAGPLKVYPLYGSLPPNQQQRIFEPTPEDTKSGYGRKVVISTNIAETSLTIDG 369
Query: 337 IKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHR 396
I YV+ PGF+K K YNP+ +ESLLV+PISKASA QR G + RT PGKCFRLYT + +
Sbjct: 370 IVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFRK 429
Query: 397 --IWMT---ILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKA 451
I T IL + + ++ L + LV+FD++DPP L+
Sbjct: 430 ELIEQTYPEILRSNLSSTVLELKKLGIDDLVHFDYMDPPAPETMMRALEELNYLNCLDDN 489
Query: 452 GQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYAD 511
G LT +GR+ +EFP+DP L+ ++ ++ CS+E++++ A+L V N +F RP + AD
Sbjct: 490 GDLTPLGRKASEFPLDPNLAVMLIRSPEFYCSNEVLSLTALLSVPN-VFVRPNSARKLAD 548
Query: 512 NARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFAR 571
R F D GD + LL VY+ ++ + +WC +++ ++ A ++R QL R
Sbjct: 549 EMRQQFTHPD-GDHLTLLNVYHAYKSGEGTADWCWNHFLSHRALISADNVRKQLRRTMER 607
Query: 572 VEID 575
E++
Sbjct: 608 QEVE 611
>GENEDB_PFALCIPARUM|PFL1525c [details] [associations]
symbol:PFL1525c "pre-mRNA splicing factor RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0008380
"RNA splicing" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0005681
GO:GO:0003676 GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 683 (245.5 bits), Expect = 5.6e-117, Sum P(2) = 5.6e-117
Identities = 147/327 (44%), Positives = 212/327 (64%)
Query: 6 AWEKQQREKCTFEIEDKIVDFFSESVFDGDNFDEFESELPNKSVVK---STLEMLQEERK 62
++EK++ E + D +V+F F G N E E E + + K ++ + +ERK
Sbjct: 378 SFEKKESELNENGLTD-VVEFVHLESFYGMNEKEKELEKLFEDIKKRKEKKMKKIIDERK 436
Query: 63 TLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE-------------PRWVAA 109
LPIY + ++L+A+ +L +VGETGSGK+TQ+ QYLYE PR +A
Sbjct: 437 RLPIYSYRYDILKAIKNNKILILVGETGSGKSTQLTQYLYECKYHMYGNIICTQPRRIAC 496
Query: 110 MSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLI 169
+++A RV++EM VK+G EVGY IRF++ TS+ T + YMTD M LR ++ P+LE SVLI
Sbjct: 497 IAIANRVAEEMNVKIGKEVGYVIRFQNKTSEATKIMYMTDGMFLRLLLYNPTLEDISVLI 556
Query: 170 VDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYP 229
+DEA ER L TD + ++KD+ N+R +++++ISSATLDAEK S YF APIF +PGR+Y
Sbjct: 557 IDEAHERALHTDVILPIVKDICNFRENIRVVISSATLDAEKISTYFNCAPIFYVPGRKYN 616
Query: 230 VELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTK 289
V+++YT E +YI A ++T LQIH+ + GDILVFL GQ EIE ++ L+ + L K
Sbjct: 617 VDIYYTINNESNYISAIVITILQIHITQGKGDILVFLPGQYEIELVQQELENKLNELAPK 676
Query: 290 IAELIICPIYANLPTELQAKIFEPTPE 316
L+I PIY++LP E QA+IFE E
Sbjct: 677 YRNLVILPIYSSLPVEYQARIFEDVTE 703
Score = 506 (183.2 bits), Expect = 5.6e-117, Sum P(2) = 5.6e-117
Identities = 109/262 (41%), Positives = 158/262 (60%)
Query: 319 RKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSE 378
RK++L+TNI ETS+TID I YVI G K K YNP +G+ESL+ P SKAS NQRTG +
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRAG 862
Query: 379 RTGPGKCFRLYTLHNY-----HRIWMTILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXX 433
R GKCFRL+T ++ + I C+ + +I + SL + ++NFDF+DPP
Sbjct: 863 RKRDGKCFRLFTKKSFIDLSDNSIPEIQRCE-ISSMILLLKSLGMDDIINFDFLDPPSPI 921
Query: 434 XXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSL-DKYKCSDEIITIAAM 492
GALN G LTR GR+MAEFP D K SK I+S +KY C DEI+ +A+M
Sbjct: 922 VIIKGLELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMILSAAEKYNCVDEILNVASM 981
Query: 493 LFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQV 552
L N+IFY K K+ A+N + F + GD + L +Y E N+ST +C ++++Q
Sbjct: 982 LTHANNIFYVQKGKEKEAENIKKMFIIEGGGDFLLFLNIYKQCEENNFSTSFCYDHFLQY 1041
Query: 553 SSMKRARDIRDQLEGLFARVEI 574
++ + +D++ QL + +++I
Sbjct: 1042 HTLIKVKDVKTQLLSICEKIDI 1063
>UNIPROTKB|Q8I5A4 [details] [associations]
symbol:PFL1525c "Pre-mRNA splicing factor RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008380 GO:GO:0005681 GO:GO:0003676
GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 683 (245.5 bits), Expect = 5.6e-117, Sum P(2) = 5.6e-117
Identities = 147/327 (44%), Positives = 212/327 (64%)
Query: 6 AWEKQQREKCTFEIEDKIVDFFSESVFDGDNFDEFESELPNKSVVK---STLEMLQEERK 62
++EK++ E + D +V+F F G N E E E + + K ++ + +ERK
Sbjct: 378 SFEKKESELNENGLTD-VVEFVHLESFYGMNEKEKELEKLFEDIKKRKEKKMKKIIDERK 436
Query: 63 TLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE-------------PRWVAA 109
LPIY + ++L+A+ +L +VGETGSGK+TQ+ QYLYE PR +A
Sbjct: 437 RLPIYSYRYDILKAIKNNKILILVGETGSGKSTQLTQYLYECKYHMYGNIICTQPRRIAC 496
Query: 110 MSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLI 169
+++A RV++EM VK+G EVGY IRF++ TS+ T + YMTD M LR ++ P+LE SVLI
Sbjct: 497 IAIANRVAEEMNVKIGKEVGYVIRFQNKTSEATKIMYMTDGMFLRLLLYNPTLEDISVLI 556
Query: 170 VDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYP 229
+DEA ER L TD + ++KD+ N+R +++++ISSATLDAEK S YF APIF +PGR+Y
Sbjct: 557 IDEAHERALHTDVILPIVKDICNFRENIRVVISSATLDAEKISTYFNCAPIFYVPGRKYN 616
Query: 230 VELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTK 289
V+++YT E +YI A ++T LQIH+ + GDILVFL GQ EIE ++ L+ + L K
Sbjct: 617 VDIYYTINNESNYISAIVITILQIHITQGKGDILVFLPGQYEIELVQQELENKLNELAPK 676
Query: 290 IAELIICPIYANLPTELQAKIFEPTPE 316
L+I PIY++LP E QA+IFE E
Sbjct: 677 YRNLVILPIYSSLPVEYQARIFEDVTE 703
Score = 506 (183.2 bits), Expect = 5.6e-117, Sum P(2) = 5.6e-117
Identities = 109/262 (41%), Positives = 158/262 (60%)
Query: 319 RKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSE 378
RK++L+TNI ETS+TID I YVI G K K YNP +G+ESL+ P SKAS NQRTG +
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRAG 862
Query: 379 RTGPGKCFRLYTLHNY-----HRIWMTILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXX 433
R GKCFRL+T ++ + I C+ + +I + SL + ++NFDF+DPP
Sbjct: 863 RKRDGKCFRLFTKKSFIDLSDNSIPEIQRCE-ISSMILLLKSLGMDDIINFDFLDPPSPI 921
Query: 434 XXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSL-DKYKCSDEIITIAAM 492
GALN G LTR GR+MAEFP D K SK I+S +KY C DEI+ +A+M
Sbjct: 922 VIIKGLELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMILSAAEKYNCVDEILNVASM 981
Query: 493 LFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQV 552
L N+IFY K K+ A+N + F + GD + L +Y E N+ST +C ++++Q
Sbjct: 982 LTHANNIFYVQKGKEKEAENIKKMFIIEGGGDFLLFLNIYKQCEENNFSTSFCYDHFLQY 1041
Query: 553 SSMKRARDIRDQLEGLFARVEI 574
++ + +D++ QL + +++I
Sbjct: 1042 HTLIKVKDVKTQLLSICEKIDI 1063
>UNIPROTKB|F1MVJ1 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
IPI:IPI00690755 EMBL:DAAA02046748 EMBL:DAAA02046749
Ensembl:ENSBTAT00000045480 ArrayExpress:F1MVJ1 Uniprot:F1MVJ1
Length = 1226
Score = 1145 (408.1 bits), Expect = 3.4e-116, P = 3.4e-116
Identities = 253/582 (43%), Positives = 362/582 (62%)
Query: 9 KQQREKCTFEIEDKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTLPIYP 68
K++ E ED VD+ +E F D+ + +SE ++ K ++ E+R+ LPI+
Sbjct: 482 KKEEEPDKSLTEDGKVDYRTEQKF-ADHMKK-KSEASSEFAKKKSI---LEQRQYLPIFA 536
Query: 69 FWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE-------------PRWVAAMSVAAR 115
+ELL + ++ +VGETGSGKTTQ+ QYL+E PR VAAMSVA R
Sbjct: 537 VQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKR 596
Query: 116 VSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQE 175
VS+EMG LG EVGY+IRFEDCTS+ T++KYMTD +LLRE + E L+ YS +I+DEA E
Sbjct: 597 VSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAIIMDEAHE 656
Query: 176 RTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFYT 235
R+L+TD LFGLL++++ R DLKL+++SAT+DAEKF+ +FG+ PIF IPGR +PV++ ++
Sbjct: 657 RSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPVDILFS 716
Query: 236 KAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELII 295
K P+ DY+EAA+ +LQ+H++ GDIL+F+ GQ++IE + + + L A L +
Sbjct: 717 KTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPA-LAV 775
Query: 296 CPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKT 355
PIY+ LP++LQAKIF+ P+ RK ++ATNIAETSLT+DGI +VI G+ K+K +P
Sbjct: 776 LPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVSSPSL 835
Query: 356 GMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIWMTILC---QKYN--ELI 410
G L + I K N TG S T P +C RLYT Y +T Q+ N ++
Sbjct: 836 GGSDLKIMEIQKIQKNINTGCSGCTSP-RCCRLYTQSAYKNELLTTTVPEIQRTNLANVV 894
Query: 411 WKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKL 470
+ SL L+ F F+DPP GAL+ G LT GR M EFP+DP L
Sbjct: 895 LLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPAL 954
Query: 471 SKT-IVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALL 529
SK IVS D CS EI+ I +ML V +IFYRPK ++ +D R F + + D ++ L
Sbjct: 955 SKMLIVSCDM-GCSSEILLIVSMLSVP-AIFYRPKGREEESDQIREKFAVPE-SDHLSYL 1011
Query: 530 RVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFAR 571
VY W+ NYST WC +++I +M++ R++R QL+ + +
Sbjct: 1012 NVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQ 1053
>CGD|CAL0000153 [details] [associations]
symbol:orf19.1687 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0000153 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000014
EMBL:AACQ01000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12820 RefSeq:XP_721644.1
RefSeq:XP_721764.1 STRING:Q5AJA5 GeneID:3636669 GeneID:3636709
KEGG:cal:CaO19.1687 KEGG:cal:CaO19.9255 Uniprot:Q5AJA5
Length = 767
Score = 1130 (402.8 bits), Expect = 1.3e-114, P = 1.3e-114
Identities = 251/547 (45%), Positives = 341/547 (62%)
Query: 61 RKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQY-LYE--------------PR 105
R+ LP++ EE L+ ++ VGETGSGKTTQIPQ+ LY+ PR
Sbjct: 91 RRDLPVHAQREEFLKIFHSTQIMVFVGETGSGKTTQIPQFVLYDEMPHLTGKQVACTQPR 150
Query: 106 WVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESY 165
VAAMSVAARV+ EM V+LG EVGY+IRFE+ + KT+LKYMTD MLLRE + + L Y
Sbjct: 151 RVAAMSVAARVADEMDVELGEEVGYNIRFENNSGPKTILKYMTDGMLLREAMEDHDLTRY 210
Query: 166 SVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPG 225
S +I+DEA ERTL+TD L GLLK + RPDLK++I SATLDAEKF +YF +AP+ +PG
Sbjct: 211 SCIILDEAHERTLATDILMGLLKQVSVRRPDLKIIIMSATLDAEKFQNYFNNAPLLAVPG 270
Query: 226 RRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRG 285
R +PVE++YT + DY++AAI T LQIH E GDIL+FLTG++EIE A +
Sbjct: 271 RTHPVEIYYTPEFQRDYLDAAIRTVLQIHATEGEGDILLFLTGEEEIEDACRKISLEGDE 330
Query: 286 LGTK--IAELIICPIYANLPTELQAKIFEPTPER-------ARKVVLATNIAETSLTIDG 336
L + L + P+Y +LP Q KIFEP P RKV+++TNIAETSLTIDG
Sbjct: 331 LVREQNCGPLKVYPLYGSLPPHQQQKIFEPAPTNPNPNGRPGRKVIISTNIAETSLTIDG 390
Query: 337 IKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHR 396
I YV+ PGF+K K YNP+ +ESLLV+PISKASA QR G + RT PGKCFRLYT + +
Sbjct: 391 IVYVVDPGFSKQKVYNPRVRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFKK 450
Query: 397 -----IWMTILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKA 451
+ IL + + ++ L + LV+FDF+DPP L+
Sbjct: 451 ELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNYLQCLSDE 510
Query: 452 GQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYAD 511
G LT +GR ++FP+DP L+ ++ Y CS+EI+TI AML V N +F RP + AD
Sbjct: 511 GDLTALGRLASQFPLDPMLAVMLIGSPAYSCSEEILTIVAMLSVPN-VFVRPASARKRAD 569
Query: 512 NARMNFHLGDVGDRIALLRVYNCWRECNYST----EWCRENYIQVSSMKRARDIRDQLEG 567
A+++F D GD + L+ VY + S +WCR+N++ S+ A+++R+QL+
Sbjct: 570 EAKLSFAQAD-GDHLTLINVYEAFISPEASEIGTHKWCRDNFLSYRSLTSAKNVRNQLQR 628
Query: 568 LFARVEI 574
L + ++
Sbjct: 629 LMQKYDL 635
>ASPGD|ASPL0000059403 [details] [associations]
symbol:AN0133 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000004 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
OMA:TVLQIHA OrthoDB:EOG4S7NZ4 RefSeq:XP_657737.1 STRING:Q5BH47
EnsemblFungi:CADANIAT00002613 GeneID:2875910 KEGG:ani:AN0133.2
Uniprot:Q5BH47
Length = 769
Score = 1123 (400.4 bits), Expect = 7.3e-114, P = 7.3e-114
Identities = 268/606 (44%), Positives = 364/606 (60%)
Query: 2 NPFDAWEKQQREKCTFEIEDKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEER 61
N A+ K QR K T K+ D + F+ F + P S S L+ R
Sbjct: 51 NKNSAFAKLQRHKTTAAQAQKVED---------NEFNPFTNR-PYSSKYFSILKT----R 96
Query: 62 KTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLY---------------EPRW 106
+ LP++ +E LQ +L VGETGSGKTTQIPQ++ +PR
Sbjct: 97 RDLPVHAQRDEFLQLYQQSQILVFVGETGSGKTTQIPQFVLLDDLPQTQRKMIACTQPRR 156
Query: 107 VAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYS 166
VAAMSVA RV+ E+ V LG EVGYSIRFED TS KT+LKYMTD MLLRE + + L YS
Sbjct: 157 VAAMSVAQRVAAELDVTLGEEVGYSIRFEDMTSPKTLLKYMTDGMLLREAMNDHELSRYS 216
Query: 167 VLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGR 226
+I+DEA ERT+STD L GLLK+++ RPDLK++I SATLDA+KF YF AP+ +PGR
Sbjct: 217 TIILDEAHERTMSTDVLMGLLKEVVQRRPDLKIIIMSATLDAQKFQRYFNDAPLLAVPGR 276
Query: 227 RYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIE-RAEEILKQRTRG 285
+PVE+FYT PE DY+EAAI T LQIH E GDIL+FLTG++EIE A +I +
Sbjct: 277 THPVEIFYTPEPEQDYVEAAIRTVLQIHATEDEGDILLFLTGEEEIEDAARKISLEGDEM 336
Query: 286 LGTKIA-ELIICPIYANLPTELQAKIFEPTP--ER-----ARKVVLATNIAETSLTIDGI 337
+ A L + +Y +LP +Q +IFEP P R RKV+++TNIAETSLTIDGI
Sbjct: 337 IREADAGPLKVYTLYGSLPPHMQQRIFEPAPPPRRPGGRPGRKVIVSTNIAETSLTIDGI 396
Query: 338 KYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHR- 396
YV+ PGF+K K YNP+ +ESLLV+PISKASA QR G + RT PGKCFRLYT + +
Sbjct: 397 VYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTESAFKKE 456
Query: 397 -IWMT---ILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAG 452
I T IL + + ++ L + LV+FD +DPP L+ G
Sbjct: 457 LIDQTYPEILRSNLSSTVLELKKLGIDDLVHFDLMDPPAPETLMRALEELNYLACLDDDG 516
Query: 453 QLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADN 512
LT +GR +EFP+DP L+ ++S ++ CS+EI++I A+L V IF RP ++ AD
Sbjct: 517 NLTPLGRLASEFPLDPALAVMLISSPEFYCSNEILSITALLSVPQ-IFVRPASQRKRADE 575
Query: 513 ARMNFHLGDVGDRIALLRVYNCWR--ECNYST-EWCRENYIQVSSMKRARDIRDQLEGLF 569
+ F D GD + LL Y+ ++ E + +WC ++++ + S++ A ++R QL +
Sbjct: 576 MKNLFAHPD-GDHLTLLNAYHAFKSPEAQENPKQWCHDHFLSLRSLQSADNVRMQLLRIM 634
Query: 570 ARVEID 575
R E++
Sbjct: 635 EREELE 640
>SGD|S000005294 [details] [associations]
symbol:PRP2 "RNA-dependent ATPase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0071006 "U2-type catalytic step 1
spliceosome" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000349 "generation of catalytic spliceosome for
first transesterification step" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000005294
GO:GO:0005524 GO:GO:0005634 EMBL:BK006947 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:X77395
GO:GO:0000349 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
OrthoDB:EOG4SBJ63 GO:GO:0008186 EMBL:X55936 EMBL:X55999 EMBL:Z71626
PIR:S12334 RefSeq:NP_014408.1 ProteinModelPortal:P20095 SMR:P20095
DIP:DIP-3961N IntAct:P20095 MINT:MINT-496813 STRING:P20095
PaxDb:P20095 EnsemblFungi:YNR011C GeneID:855745 KEGG:sce:YNR011C
CYGD:YNR011c KO:K12814 OMA:DDKIHIN NextBio:980148
Genevestigator:P20095 GermOnline:YNR011C Uniprot:P20095
Length = 876
Score = 1104 (393.7 bits), Expect = 7.6e-112, P = 7.6e-112
Identities = 250/524 (47%), Positives = 326/524 (62%)
Query: 55 EMLQEERKTLPIYPFWEELLQAVSGYPVLAIV-GETGSGKTTQIPQYLYEPRWVAAMSVA 113
E+LQE +K + E + P + G T GK QI + +PR VAA SVA
Sbjct: 231 ELLQEIKKNQVLIIMGETGSGKTTQLPQYLVEDGFTDQGKL-QIA--ITQPRRVAATSVA 287
Query: 114 ARVSQEMGVKLGHEVGYSIRFEDCTS-DKTVLKYMTDCMLLREIVIEPSLESYSVLIVDE 172
ARV+ EM V LG EVGY IRFED T+ +KTVLKYMTD MLLRE + + L YS +++DE
Sbjct: 288 ARVADEMNVVLGKEVGYQIRFEDKTTPNKTVLKYMTDGMLLREFLTDSKLSKYSCIMIDE 347
Query: 173 AQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEL 232
A ERTL+TD L GLLKD++ RP LKLLISSAT++A+KFS++F + PIF +PGRRYPV++
Sbjct: 348 AHERTLATDILIGLLKDILPQRPTLKLLISSATMNAKKFSEFFDNCPIFNVPGRRYPVDI 407
Query: 233 FYTKAPEVDYIEAAIVTALQIHVNEPT-GDILVFLTGQDEIERAEEILKQRTRGLGTKIA 291
YT PE +YI AAI T QIH + GDILVFLTGQ+EIER + L++ LG++
Sbjct: 408 HYTLQPEANYIHAAITTIFQIHTTQSLPGDILVFLTGQEEIERTKTKLEEIMSKLGSRTK 467
Query: 292 ELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSY 351
++II PIYANLP E Q KIF+PTPE RKVVLATNIAETSLTIDGI+YVI PGF K SY
Sbjct: 468 QMIITPIYANLPQEQQLKIFQPTPENCRKVVLATNIAETSLTIDGIRYVIDPGFVKENSY 527
Query: 352 NPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNY-HRIWMT----ILCQKY 406
P TGM LL P S+AS +QR G + R GPGKCFR++T +Y H + + I
Sbjct: 528 VPSTGMTQLLTVPCSRASVDQRAGRAGRVGPGKCFRIFTKWSYLHELELMPKPEITRTNL 587
Query: 407 NELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPI 466
+ + +LSL L+ F +D P GALN G +TR+G+ M EFP
Sbjct: 588 SNTVLLLLSLGVTDLIKFPLMDKPSIPTLRKSLENLYILGALNSKGTITRLGKMMCEFPC 647
Query: 467 DPKLSKTIVSLDKYK-CS---DEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDV 522
+P+ +K + + ++ C +E +TI +ML S+F K D A L +V
Sbjct: 648 EPEFAKVLYTAATHEQCQGVLEECLTIVSMLHETPSLFIGQK-----RDAAASV--LSEV 700
Query: 523 -GDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQL 565
D I L ++N WR +S WC+++ IQ +M R R+IR+QL
Sbjct: 701 ESDHILYLEIFNQWRNSKFSRSWCQDHKIQFKTMLRVRNIRNQL 744
Score = 595 (214.5 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 130/256 (50%), Positives = 171/256 (66%)
Query: 21 DKIVDFFSES--VFDGDNFDEFESELPNK-SVVKSTLEMLQEERKTLPIYPFWEELLQAV 77
D ++D+ +E + + ++E+ L + + +QE RK LP++ + +ELLQ +
Sbjct: 178 DAMIDYTNEEDDLLPEEKL-QYEARLAQALETEEKRILTIQEARKLLPVHQYKDELLQEI 236
Query: 78 SGYPVLAIVGETGSGKTTQIPQYLYE---------------PRWVAAMSVAARVSQEMGV 122
VL I+GETGSGKTTQ+PQYL E PR VAA SVAARV+ EM V
Sbjct: 237 KKNQVLIIMGETGSGKTTQLPQYLVEDGFTDQGKLQIAITQPRRVAATSVAARVADEMNV 296
Query: 123 KLGHEVGYSIRFEDCTS-DKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTD 181
LG EVGY IRFED T+ +KTVLKYMTD MLLRE + + L YS +++DEA ERTL+TD
Sbjct: 297 VLGKEVGYQIRFEDKTTPNKTVLKYMTDGMLLREFLTDSKLSKYSCIMIDEAHERTLATD 356
Query: 182 NLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFYTKAPEVD 241
L GLLKD++ RP LKLLISSAT++A+KFS++F + PIF +PGRRYPV++ YT PE +
Sbjct: 357 ILIGLLKDILPQRPTLKLLISSATMNAKKFSEFFDNCPIFNVPGRRYPVDIHYTLQPEAN 416
Query: 242 YIEAAIVTALQIHVNE 257
YI AAI T QIH +
Sbjct: 417 YIHAAITTIFQIHTTQ 432
>WB|WBGene00018967 [details] [associations]
symbol:F56D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0040022 "feminization of
hermaphroditic germ-line" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 1089 (388.4 bits), Expect = 2.9e-110, P = 2.9e-110
Identities = 231/476 (48%), Positives = 309/476 (64%)
Query: 103 EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
+PR VAAMSVA RV++EM V LG EVGYSIRFEDC S++TVLKY TD MLLRE + P L
Sbjct: 136 QPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLREAMNSPLL 195
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFK 222
+ Y VLI+DEA ERTL+TD L GL+K+++ R D+K++I SATLDA KF YF P+
Sbjct: 196 DKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYFEDCPLLS 255
Query: 223 IPGRRYPVELFYTKAPEVDYIEAAIVTALQIH-VNEPTGDILVFLTGQDEIERAEEILKQ 281
+PGR +PVE+F+T E DY+EAAI T +QIH V E GDIL+FLTGQ+EIE A + + +
Sbjct: 256 VPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEGDILLFLTGQEEIEEACKRIDR 315
Query: 282 RTRGLGTKIAELIICPIYANLPTELQAKIFEPTPER------ARKVVLATNIAETSLTID 335
+ LG L P+Y+ LP Q +IFEP P +RK V++TNIAETSLTID
Sbjct: 316 EIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCVISTNIAETSLTID 375
Query: 336 GIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNY- 394
G+ +VI PGF+K K YNP+ +ESLLV PISKASA QR G + RT PGKCFRLYT Y
Sbjct: 376 GVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRTKPGKCFRLYTETAYG 435
Query: 395 ----HRIWMTILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNK 450
+ + IL ++ ++ L + LV+FDF+DPP A+N
Sbjct: 436 SEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPAPETLMRALELLNYLQAIND 495
Query: 451 AGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYA 510
G+LT +G MAEFP+DP+L+K +++ + CS+EI++I AML V + RP + + A
Sbjct: 496 DGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSITAMLSVPQC-WVRPNEMRTEA 554
Query: 511 DNARMNF-HLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQL 565
D A+ F H+ GD + LL VY+ +++ +WC +N+I +MK A +R QL
Sbjct: 555 DEAKARFAHID--GDHLTLLNVYHSFKQNQEDPQWCYDNFINYRTMKTADTVRTQL 608
>UNIPROTKB|Q20875 [details] [associations]
symbol:F56D2.6 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase F56D2.6" species:6239 "Caenorhabditis
elegans" [GO:0030686 "90S preribosome" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 1089 (388.4 bits), Expect = 2.9e-110, P = 2.9e-110
Identities = 231/476 (48%), Positives = 309/476 (64%)
Query: 103 EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
+PR VAAMSVA RV++EM V LG EVGYSIRFEDC S++TVLKY TD MLLRE + P L
Sbjct: 136 QPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLREAMNSPLL 195
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFK 222
+ Y VLI+DEA ERTL+TD L GL+K+++ R D+K++I SATLDA KF YF P+
Sbjct: 196 DKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYFEDCPLLS 255
Query: 223 IPGRRYPVELFYTKAPEVDYIEAAIVTALQIH-VNEPTGDILVFLTGQDEIERAEEILKQ 281
+PGR +PVE+F+T E DY+EAAI T +QIH V E GDIL+FLTGQ+EIE A + + +
Sbjct: 256 VPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEGDILLFLTGQEEIEEACKRIDR 315
Query: 282 RTRGLGTKIAELIICPIYANLPTELQAKIFEPTPER------ARKVVLATNIAETSLTID 335
+ LG L P+Y+ LP Q +IFEP P +RK V++TNIAETSLTID
Sbjct: 316 EIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCVISTNIAETSLTID 375
Query: 336 GIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNY- 394
G+ +VI PGF+K K YNP+ +ESLLV PISKASA QR G + RT PGKCFRLYT Y
Sbjct: 376 GVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRTKPGKCFRLYTETAYG 435
Query: 395 ----HRIWMTILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNK 450
+ + IL ++ ++ L + LV+FDF+DPP A+N
Sbjct: 436 SEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPAPETLMRALELLNYLQAIND 495
Query: 451 AGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYA 510
G+LT +G MAEFP+DP+L+K +++ + CS+EI++I AML V + RP + + A
Sbjct: 496 DGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSITAMLSVPQC-WVRPNEMRTEA 554
Query: 511 DNARMNF-HLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQL 565
D A+ F H+ GD + LL VY+ +++ +WC +N+I +MK A +R QL
Sbjct: 555 DEAKARFAHID--GDHLTLLNVYHSFKQNQEDPQWCYDNFINYRTMKTADTVRTQL 608
>CGD|CAL0005059 [details] [associations]
symbol:orf19.2818 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0000386
"second spliceosomal transesterification activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 CGD:CAL0005059
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000080 EMBL:AACQ01000079 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12815
RefSeq:XP_715749.1 RefSeq:XP_715799.1 STRING:Q5A227 GeneID:3642531
GeneID:3642595 KEGG:cal:CaO19.10336 KEGG:cal:CaO19.2818
Uniprot:Q5A227
Length = 1070
Score = 965 (344.8 bits), Expect = 1.3e-109, Sum P(2) = 1.3e-109
Identities = 222/489 (45%), Positives = 312/489 (63%)
Query: 103 EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDK-TVLKYMTDCMLLREIVIEPS 161
+PR VAAMSVA RVS+EM KLG EVGYSIRFED T +K TV+KYMT+ +LLREI+ +P
Sbjct: 417 QPRRVAAMSVAKRVSEEMNCKLGEEVGYSIRFEDKTDNKKTVIKYMTEGILLREILADPM 476
Query: 162 LESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIF 221
L +YS +I+DEA ER+L+TD L GL K+L+ R DLKL+++SAT++A +F+ +FG AP F
Sbjct: 477 LANYSCIIMDEAHERSLNTDILLGLFKNLLAKRKDLKLIVTSATMNANRFTKFFGVAPQF 536
Query: 222 KIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHV--------NEPTGDILVFLTGQDEIE 273
IPGR +PVE+F+ + +DY+E A+ L IH+ N GDILVF+TGQ++IE
Sbjct: 537 HIPGRTFPVEVFFNRDVNMDYVEMAVKQVLTIHLGRWNADNNNANDGDILVFMTGQEDIE 596
Query: 274 RAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLT 333
+++K++ L L I PIY+ +P +LQ KIF T + RKVV+ATNIAETSLT
Sbjct: 597 ITCDLIKEKLNLLEDP-PPLDIFPIYSTMPQDLQKKIFNKTNLQRRKVVVATNIAETSLT 655
Query: 334 IDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHN 393
+DGIKYVI G KVK YNPK GM++L V PIS A+A+QR+G + RTG G +RLYT
Sbjct: 656 VDGIKYVIDCGLVKVKVYNPKLGMDTLQVVPISLANADQRSGRAGRTGAGIAYRLYTEKA 715
Query: 394 YHRIWMTIL----CQKYN--ELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGA 447
M + Q+ N ++ + SL N + +F F+DPP GA
Sbjct: 716 TEPDSMYVQPIPEIQRSNLSNIMLLLKSLKVNDINSFPFLDPPPKDLLNCSLYDLWAIGA 775
Query: 448 LNKAGQLTRVGRQMAEFPIDPKLSKTIV--SLDKYKCSDEIITIAAMLFVGNSIFYRPKD 505
L+ G+LT++G M +FPI+P L+K I+ + ++ CS+E++TI AML V N IF RPK+
Sbjct: 776 LDNLGELTKLGHSMTQFPIEPTLAKLILLSTQPEFHCSEEVVTIVAMLSVPN-IFNRPKE 834
Query: 506 KQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQL 565
+ AD AR F + + D + LL V+N W N + + NY ++++ + QL
Sbjct: 835 RANEADMAREKFIISE-SDHLTLLNVFNQW---NINLNKFKGNYTKINNWCNKNFL--QL 888
Query: 566 EGLFARVEI 574
+ L+ +I
Sbjct: 889 KSLYRAKDI 897
Score = 590 (212.7 bits), Expect = 3.0e-68, Sum P(2) = 3.0e-68
Identities = 140/326 (42%), Positives = 198/326 (60%)
Query: 256 NEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTP 315
N GDILVF+TGQ++IE +++K++ L L I PIY+ +P +LQ KIF T
Sbjct: 579 NANDGDILVFMTGQEDIEITCDLIKEKLNLLEDP-PPLDIFPIYSTMPQDLQKKIFNKTN 637
Query: 316 ERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTG 375
+ RKVV+ATNIAETSLT+DGIKYVI G KVK YNPK GM++L V PIS A+A+QR+G
Sbjct: 638 LQRRKVVVATNIAETSLTVDGIKYVIDCGLVKVKVYNPKLGMDTLQVVPISLANADQRSG 697
Query: 376 LSERTGPGKCFRLYTLHNYHRIWMTIL----CQKYN--ELIWKMLSLFSNVLVNFDFIDP 429
+ RTG G +RLYT M + Q+ N ++ + SL N + +F F+DP
Sbjct: 698 RAGRTGAGIAYRLYTEKATEPDSMYVQPIPEIQRSNLSNIMLLLKSLKVNDINSFPFLDP 757
Query: 430 PXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIV--SLDKYKCSDEII 487
P GAL+ G+LT++G M +FPI+P L+K I+ + ++ CS+E++
Sbjct: 758 PPKDLLNCSLYDLWAIGALDNLGELTKLGHSMTQFPIEPTLAKLILLSTQPEFHCSEEVV 817
Query: 488 TIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWR------ECNYS 541
TI AML V N IF RPK++ AD AR F + + D + LL V+N W + NY+
Sbjct: 818 TIVAMLSVPN-IFNRPKERANEADMAREKFIISE-SDHLTLLNVFNQWNINLNKFKGNYT 875
Query: 542 --TEWCRENYIQVSSMKRARDIRDQL 565
WC +N++Q+ S+ RA+DI+ QL
Sbjct: 876 KINNWCNKNFLQLKSLYRAKDIKHQL 901
Score = 138 (53.6 bits), Expect = 1.3e-109, Sum P(2) = 1.3e-109
Identities = 29/75 (38%), Positives = 46/75 (61%)
Query: 30 SVFDGDNF-DEFESELPNKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGE 88
S+ D N +E + E N V ++ + +Q++RK+LP + +LL + V ++GE
Sbjct: 323 SIIDTANTTEEIKQEEKNADVNETKHQDIQQQRKSLPAFAVRNDLLTTIRDNQVTIVIGE 382
Query: 89 TGSGKTTQIPQYLYE 103
TGSGKTTQ+ Q+LYE
Sbjct: 383 TGSGKTTQLTQFLYE 397
>UNIPROTKB|F1NY80 [details] [associations]
symbol:F1NY80 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
EMBL:AADN02054197 EMBL:AADN02054196 IPI:IPI00821409
Ensembl:ENSGALT00000038723 Uniprot:F1NY80
Length = 1170
Score = 845 (302.5 bits), Expect = 7.1e-109, Sum P(2) = 7.1e-109
Identities = 174/354 (49%), Positives = 249/354 (70%)
Query: 9 KQQREKCTFEIEDKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTLPIYP 68
K++ EK ED VD+ +E F ++ E +SE ++ K ++ E+R+ LPI+
Sbjct: 488 KKEEEKDEMVTEDGKVDYRTEQKF-AEHMKE-KSEARSEFAKKKSI---LEQRQYLPIFA 542
Query: 69 FWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE-------------PRWVAAMSVAAR 115
+ELL + ++ +VGETGSGKTTQ+ QYL+E PR VAAMSVA R
Sbjct: 543 VQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKR 602
Query: 116 VSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQE 175
VS+EMGV+LG EVGY+IRFEDCTS+ T++KYMTD +LLRE + E L++YS +I+DEA E
Sbjct: 603 VSEEMGVRLGEEVGYAIRFEDCTSENTIIKYMTDGILLRESLREADLDNYSAIIMDEAHE 662
Query: 176 RTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFYT 235
R+L+TD LFGLL++++ R DLKL+++SAT+DA+KF+ +FG+ PIF IPGR +PV++ ++
Sbjct: 663 RSLNTDVLFGLLREVVARRSDLKLVVTSATMDADKFASFFGNVPIFHIPGRTFPVDILFS 722
Query: 236 KAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELII 295
K P+ DY+EAA+ ALQ+H++ GDILVF+ GQ++IE E + + L K L +
Sbjct: 723 KTPQEDYVEAAVKQALQVHLSGAPGDILVFMPGQEDIEVTSEQIVEHLEEL-EKAPALAV 781
Query: 296 CPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVK 349
PIY+ LP++LQAKIF+ P+ RK ++ATNIAETSLT+DGI +VI G+ K+K
Sbjct: 782 LPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLK 835
Score = 251 (93.4 bits), Expect = 7.1e-109, Sum P(2) = 7.1e-109
Identities = 54/127 (42%), Positives = 76/127 (59%)
Query: 446 GALNKAGQLTRVGRQMAEFPIDPKLSKT-IVSLDKYKCSDEIITIAAMLFVGNSIFYRPK 504
G G LT GRQM EFP+DP LSK IVS D CS EI+ I +ML V +IFYRPK
Sbjct: 874 GGFIPPGGLTSTGRQMVEFPLDPALSKMLIVSCDM-GCSSEILLIVSMLSVP-AIFYRPK 931
Query: 505 DKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQ 564
++ +D R F + + D + L VY W+ NYST WC +++I +M++ R++R Q
Sbjct: 932 GREEESDQVREKFAVPE-SDHLTYLNVYLQWKNNNYSTLWCNQHFIHAKAMRKVREVRAQ 990
Query: 565 LEGLFAR 571
L+ + +
Sbjct: 991 LKDIMVQ 997
>UNIPROTKB|E1C094 [details] [associations]
symbol:E1C094 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AADN02054197 EMBL:AADN02054196
IPI:IPI00591998 Ensembl:ENSGALT00000001141 Uniprot:E1C094
Length = 1164
Score = 845 (302.5 bits), Expect = 1.9e-108, Sum P(2) = 1.9e-108
Identities = 174/354 (49%), Positives = 249/354 (70%)
Query: 9 KQQREKCTFEIEDKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTLPIYP 68
K++ EK ED VD+ +E F ++ E +SE ++ K ++ E+R+ LPI+
Sbjct: 485 KKEEEKDEMVTEDGKVDYRTEQKF-AEHMKE-KSEARSEFAKKKSI---LEQRQYLPIFA 539
Query: 69 FWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE-------------PRWVAAMSVAAR 115
+ELL + ++ +VGETGSGKTTQ+ QYL+E PR VAAMSVA R
Sbjct: 540 VQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKR 599
Query: 116 VSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQE 175
VS+EMGV+LG EVGY+IRFEDCTS+ T++KYMTD +LLRE + E L++YS +I+DEA E
Sbjct: 600 VSEEMGVRLGEEVGYAIRFEDCTSENTIIKYMTDGILLRESLREADLDNYSAIIMDEAHE 659
Query: 176 RTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFYT 235
R+L+TD LFGLL++++ R DLKL+++SAT+DA+KF+ +FG+ PIF IPGR +PV++ ++
Sbjct: 660 RSLNTDVLFGLLREVVARRSDLKLVVTSATMDADKFASFFGNVPIFHIPGRTFPVDILFS 719
Query: 236 KAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELII 295
K P+ DY+EAA+ ALQ+H++ GDILVF+ GQ++IE E + + L K L +
Sbjct: 720 KTPQEDYVEAAVKQALQVHLSGAPGDILVFMPGQEDIEVTSEQIVEHLEEL-EKAPALAV 778
Query: 296 CPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVK 349
PIY+ LP++LQAKIF+ P+ RK ++ATNIAETSLT+DGI +VI G+ K+K
Sbjct: 779 LPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLK 832
Score = 247 (92.0 bits), Expect = 1.9e-108, Sum P(2) = 1.9e-108
Identities = 54/124 (43%), Positives = 76/124 (61%)
Query: 449 NKAGQLTRVGRQMAEFPIDPKLSKT-IVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQ 507
N G LT GRQM EFP+DP LSK IVS D CS EI+ I +ML V +IFYRPK ++
Sbjct: 872 NPRG-LTSTGRQMVEFPLDPALSKMLIVSCDM-GCSSEILLIVSMLSVP-AIFYRPKGRE 928
Query: 508 IYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEG 567
+D R F + + D + L VY W+ NYST WC +++I +M++ R++R QL+
Sbjct: 929 EESDQVREKFAVPE-SDHLTYLNVYLQWKNNNYSTLWCNQHFIHAKAMRKVREVRAQLKD 987
Query: 568 LFAR 571
+ +
Sbjct: 988 IMVQ 991
>UNIPROTKB|G4NHA6 [details] [associations]
symbol:MGG_03893 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp43" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 RefSeq:XP_003719983.1
EnsemblFungi:MGG_03893T0 GeneID:2677480 KEGG:mgr:MGG_03893
Uniprot:G4NHA6
Length = 779
Score = 1060 (378.2 bits), Expect = 3.5e-107, P = 3.5e-107
Identities = 242/549 (44%), Positives = 332/549 (60%)
Query: 61 RKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQY-LYE--------------PR 105
R+ LP++ +E L ++ VGETGSGKTTQIPQY LY+ PR
Sbjct: 104 RRNLPVHQHRQEFLDVYHKTQIMVFVGETGSGKTTQIPQYVLYDELPHLNKKMVACTQPR 163
Query: 106 WVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESY 165
VAAMSVA RV+ E+ V+LG EVGYSIRFE+ T+ T+LKYMTD LLRE + +P++ Y
Sbjct: 164 RVAAMSVAQRVADELDVELGQEVGYSIRFENKTTPSTILKYMTDGQLLRETIHDPNMTRY 223
Query: 166 SVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPG 225
S +I+DEA ERTL+TD L LLK L R DLK++I SATLDA KF YF API +PG
Sbjct: 224 SCIIIDEAHERTLATDILMALLKQLSLRRSDLKIIIMSATLDAAKFQRYFFEAPILAVPG 283
Query: 226 RRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRG 285
R +PVE+FYT E DYIEA++ T LQIH E GDIL+FLTG++EIE ++
Sbjct: 284 RTHPVEIFYTAEAERDYIEASVRTVLQIHATEAEGDILLFLTGEEEIEDVCRKVRLEVDE 343
Query: 286 L--GTKIAELIICPIYANLPTELQAKIFE--PTPER-----ARKVVLATNIAETSLTIDG 336
L + + P+Y LP + Q KIF P P + RK ++ATNIAETSLTIDG
Sbjct: 344 LIRDADCGPMEVYPLYGTLPPQQQQKIFNAAPPPLKKGGRPGRKCIVATNIAETSLTIDG 403
Query: 337 IKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHR 396
I YV+ PGF+K K YN + +ESLLV PIS+ASA QR G + RT PGKCFRLYT + +
Sbjct: 404 IVYVVDPGFSKQKIYNARIRVESLLVTPISRASAQQRAGRAGRTRPGKCFRLYTEAAFKK 463
Query: 397 --IWMT---ILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKA 451
I T IL + I ++ L + LV+FDF+DPP LN
Sbjct: 464 ELIEQTYPEILRSNLSNTILELKKLGVDDLVHFDFMDPPAPETMMRALEELNYLSCLNDD 523
Query: 452 GQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYAD 511
G LT +G +E+P+DP L+ +VS ++ CS+E++++ ++L V +F RP + + AD
Sbjct: 524 GDLTDLGHMASEYPLDPALAVMLVSSPEFYCSNEMLSVTSLLSVPQ-VFMRPANNRKRAD 582
Query: 512 NARMNF-HLGDVGDRIALLRVYNCWR-ECNYSTE---WCRENYIQVSSMKRARDIRDQLE 566
+ +F H+ GD + LL Y+ ++ E T+ WC E+++ + A ++R QL+
Sbjct: 583 EMKEHFKHME--GDHLTLLNAYHAFKSEMAKGTDMKKWCHEHFLSYRHLSSADNVRAQLK 640
Query: 567 GLFARVEID 575
G+ R +++
Sbjct: 641 GIMERQDLE 649
>POMBASE|SPAC2G11.11c [details] [associations]
symbol:prh1 "ATP-dependent RNA helicase Prh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
PomBase:SPAC2G11.11c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0042254 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K14781 OrthoDB:EOG4F7RTB EMBL:D13249 PIR:S35546 PIR:S62466
RefSeq:NP_593091.1 ProteinModelPortal:Q03319
EnsemblFungi:SPAC2G11.11c.1 GeneID:2541750 KEGG:spo:SPAC2G11.11c
OMA:MANDTTI NextBio:20802841 Uniprot:Q03319
Length = 719
Score = 1059 (377.8 bits), Expect = 4.4e-107, P = 4.4e-107
Identities = 235/562 (41%), Positives = 346/562 (61%)
Query: 25 DFFSESVFDGDNFD-EFESE-LPNKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPV 82
DF + V DN E SE P+K K LE +RK LPI+ + L Q + V
Sbjct: 61 DFGANEVVGSDNSSPEKRSENSPSKR--KDILE----QRKNLPIWEAHDTLCQQIQDNRV 114
Query: 83 LAIVGETGSGKTTQIPQYLYE-------------PRWVAAMSVAARVSQEMGVKLGHEVG 129
+ +VGETGSGK+TQIPQ+L E PR VAA+++A RV+ E G +LG +VG
Sbjct: 115 IVVVGETGSGKSTQIPQFLNECPYAQEGCVAITQPRRVAAVNLAKRVAAEQGCRLGEQVG 174
Query: 130 YSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKD 189
YSIRF+D TS KT +KY+TD MLLRE++ +P L Y LI+DEA ERTL TD L G +K
Sbjct: 175 YSIRFDDTTSKKTRIKYLTDGMLLRELINDPILSQYHTLILDEAHERTLMTDMLLGFVKK 234
Query: 190 LINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVT 249
+I RP L+++I SATL+AE+FS++F A I I GR+YPV++ YT PE DY++A + T
Sbjct: 235 IIKKRPALRVIIMSATLNAERFSEFFDGAEICYISGRQYPVQIHYTYTPEPDYLDACLRT 294
Query: 250 ALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAK 309
Q+H P GDILVFLTGQDEIE E ++K ++ L + + ++ CP++A+LP E Q +
Sbjct: 295 IFQLHTKLPPGDILVFLTGQDEIEALEALIKSYSKQLPSNLPQIQACPLFASLPQEQQLQ 354
Query: 310 IFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKAS 369
+F P RKVVL+TNIAETS+TI GI+YVI G AK+K +N K G+ESL V PIS+++
Sbjct: 355 VFLPALANHRKVVLSTNIAETSVTISGIRYVIDTGLAKIKQFNSKLGLESLTVQPISQSA 414
Query: 370 ANQRTGLSERTGPGKCFRLYTLHNYHRIWMTILCQ-KYNELIWKMLSLFS---NVLVNFD 425
A QR+G + R G+C+R+YT ++ ++ + + K +L +L+L + N ++NF
Sbjct: 415 AMQRSGRAGREAAGQCYRIYTEADFDKLPKETIPEIKRIDLSQAVLTLKARGQNDVINFH 474
Query: 426 FIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDE 485
++DPP GAL+ G + +G QM+ P+ P L++ +++ ++ C E
Sbjct: 475 YMDPPSKEGLLRALEHLYSIGALDDNGHINDLGYQMSLIPLLPSLARAVLAAREHNCLSE 534
Query: 486 IITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYST--E 543
+I + + L +S+F P++K+ A AR+ F L GD + L + E ++ + +
Sbjct: 535 VIDVVSCLST-DSMFLFPQEKRDEAIEARLKF-LHSEGDLLTCLNALRQYLESSHDSRKQ 592
Query: 544 WCRENYIQVSSMKRARDIRDQL 565
WC +N+I ++K DIR QL
Sbjct: 593 WCSQNFINRRALKTILDIRKQL 614
>TAIR|locus:2010549 [details] [associations]
symbol:AT1G27900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12818 EMBL:AY054692
EMBL:AY128718 IPI:IPI00545738 RefSeq:NP_564296.1 UniGene:At.25438
ProteinModelPortal:Q93Y16 SMR:Q93Y16 PaxDb:Q93Y16 PRIDE:Q93Y16
EnsemblPlants:AT1G27900.1 GeneID:839683 KEGG:ath:AT1G27900
TAIR:At1g27900 InParanoid:Q93Y16 OMA:NCRRFIV PhylomeDB:Q93Y16
ProtClustDB:CLSN2688039 ArrayExpress:Q93Y16 Genevestigator:Q93Y16
Uniprot:Q93Y16
Length = 700
Score = 1058 (377.5 bits), Expect = 5.7e-107, P = 5.7e-107
Identities = 223/538 (41%), Positives = 327/538 (60%)
Query: 64 LPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLY-------------EPRWVAAM 110
LPI F E++++ V V+ I+GETGSGK+TQ+ Q L+ +PR VAA+
Sbjct: 4 LPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYTKSGVIAITQPRRVAAV 63
Query: 111 SVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIV 170
SVA RV+QE+ V LG +VGY+IRFED T+ KT +KY+TD +LLRE + P L+ YSV+I+
Sbjct: 64 SVARRVAQELDVPLGEDVGYAIRFEDRTTSKTRIKYLTDGVLLRESLSNPMLDDYSVIIL 123
Query: 171 DEAQERTLSTDNLFGLLKDLINYRP-DLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYP 229
DEA ER+L+TD L GL+K L+ R + K+LI+SATLD EK S++F P+ +PG+ YP
Sbjct: 124 DEAHERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSGCPVLNVPGKLYP 183
Query: 230 VELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGT- 288
VE+ Y+K V YIE+++ A+ IHV EP GDIL+F+TGQD+IE+ L+++ R L
Sbjct: 184 VEILYSKERPVSYIESSLKVAIDIHVREPEGDILIFMTGQDDIEKLVSRLEEKVRSLAEG 243
Query: 289 KIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKV 348
+ II P++ +LP E+Q ++F P P R+ +++TNIAETSLT+DG+ YVI G+ K
Sbjct: 244 SCMDAIIYPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDSGYVKQ 303
Query: 349 KSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIWMTILCQKYNE 408
+ YNP +GM SL V ISK ANQR G + RT PGKC+RLY L Y ++ +
Sbjct: 304 RQYNPSSGMFSLDVIQISKVQANQRAGRAGRTRPGKCYRLYPLAVYRDDFLDATIPEIQR 363
Query: 409 -------LIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQM 461
L K L L ++ FDF+D P A+++ G +TR+GR M
Sbjct: 364 TSLAGSVLYLKSLDLPDIDILKFDFLDAPSSESLEDALKQLYFIDAIDENGAITRIGRTM 423
Query: 462 AEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIF---YRPKDKQIYADNARMNFH 518
++ P++P LS+T++ ++ C + +T+ AML ++ +P +K+ D N
Sbjct: 424 SDLPLEPSLSRTLIEANETGCLSQALTVVAMLSAETTLLPARSKPSEKKRKHDEDS-NLP 482
Query: 519 LGD-VGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVEID 575
G GD I LL+++ W NY WC+EN +QV M +D+R QL + ++ D
Sbjct: 483 NGSGYGDHIQLLQIFESWDRTNYDPVWCKENGMQVRGMVFVKDVRRQLCQIMQKISKD 540
>GENEDB_PFALCIPARUM|MAL13P1.322 [details] [associations]
symbol:MAL13P1.322 "splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 561 (202.5 bits), Expect = 3.3e-104, Sum P(2) = 3.3e-104
Identities = 126/278 (45%), Positives = 182/278 (65%)
Query: 23 IVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPV 82
+ D+ + ++ F+ + K+ +K E+L+ +++LPIY ELL AV +
Sbjct: 440 VFDYKKDKIYSS-LFNIENNNKDKKNTLKDKEELLKL-KESLPIYKSKHELLDAVYNNNI 497
Query: 83 LAIVGETGSGKTTQIPQYLYE-------------PRWVAAMSVAARVSQEMGVKLGHEVG 129
+ IVGETGSGKTTQI QYLYE PR VAA+SVA RVS EM V +G VG
Sbjct: 498 IIIVGETGSGKTTQIVQYLYEEGYHRNGIICCTQPRRVAAVSVAYRVSYEMNVDIGSLVG 557
Query: 130 YSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKD 189
Y+IRFED T+ T ++Y+TD +LLRE + + L+ YSV+I+DEA ER+++TD L G+LK+
Sbjct: 558 YTIRFEDNTTKDTKIRYVTDGILLRETLNDKELDKYSVIIMDEAHERSINTDVLLGILKN 617
Query: 190 LINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVT 249
+ R DLKL+++SAT+DA+KFS +FG+API+ I GR + V + Y + P DYIE A+
Sbjct: 618 ICLKRNDLKLIVTSATIDAKKFSAFFGNAPIYNIQGRTFKVHIEYLRTPCNDYIECAVQK 677
Query: 250 ALQIHVNEPT-----GDILVFLTGQDEIERAEEILKQR 282
A+QIHV++ GDIL+F+TGQ++I +L +R
Sbjct: 678 AIQIHVSDNNYDNNFGDILIFMTGQEDINATCYLLSER 715
Score = 511 (184.9 bits), Expect = 3.3e-104, Sum P(2) = 3.3e-104
Identities = 111/285 (38%), Positives = 167/285 (58%)
Query: 295 ICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPK 354
I PIY+ L +E Q+KIF+ RK++++TNIAETSLT+DGIKYVI G+ K+K YN
Sbjct: 774 IFPIYSQLSSEQQSKIFKKYD--LRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQT 831
Query: 355 TGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYH-RIWMTIL--CQKYN--EL 409
GM+ L V PIS+A+ANQR+G + RTG G C+RLYT + + ++ + Q+ N +
Sbjct: 832 IGMDVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDLYQNNIPEIQRSNLSNV 891
Query: 410 IWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPK 469
+ + SL L FDFID P GA+N G LT +GR+M +FP+DP
Sbjct: 892 VLLLKSLHVQNLFEFDFIDVPSKESIINSLHELWVLGAINNEGNLTDIGRKMVQFPLDPP 951
Query: 470 LSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALL 529
LSK ++ ++C+ EI+ I +ML SIF K+ ++ + F + + D + LL
Sbjct: 952 LSKIVIYSQNFQCTKEILIIVSMLS-SPSIFLESKENNESIESKKEKFTVPE-SDHLTLL 1009
Query: 530 RVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVEI 574
+Y WR NYS WC +N+IQ ++ +A+++ QL + + I
Sbjct: 1010 NIYLQWRSHNYSYSWCTKNFIQYKALNKAKEVYSQLIDIIKTLNI 1054
>UNIPROTKB|C0H5K5 [details] [associations]
symbol:MAL13P1.322 "Splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 561 (202.5 bits), Expect = 3.3e-104, Sum P(2) = 3.3e-104
Identities = 126/278 (45%), Positives = 182/278 (65%)
Query: 23 IVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPV 82
+ D+ + ++ F+ + K+ +K E+L+ +++LPIY ELL AV +
Sbjct: 440 VFDYKKDKIYSS-LFNIENNNKDKKNTLKDKEELLKL-KESLPIYKSKHELLDAVYNNNI 497
Query: 83 LAIVGETGSGKTTQIPQYLYE-------------PRWVAAMSVAARVSQEMGVKLGHEVG 129
+ IVGETGSGKTTQI QYLYE PR VAA+SVA RVS EM V +G VG
Sbjct: 498 IIIVGETGSGKTTQIVQYLYEEGYHRNGIICCTQPRRVAAVSVAYRVSYEMNVDIGSLVG 557
Query: 130 YSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKD 189
Y+IRFED T+ T ++Y+TD +LLRE + + L+ YSV+I+DEA ER+++TD L G+LK+
Sbjct: 558 YTIRFEDNTTKDTKIRYVTDGILLRETLNDKELDKYSVIIMDEAHERSINTDVLLGILKN 617
Query: 190 LINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVT 249
+ R DLKL+++SAT+DA+KFS +FG+API+ I GR + V + Y + P DYIE A+
Sbjct: 618 ICLKRNDLKLIVTSATIDAKKFSAFFGNAPIYNIQGRTFKVHIEYLRTPCNDYIECAVQK 677
Query: 250 ALQIHVNEPT-----GDILVFLTGQDEIERAEEILKQR 282
A+QIHV++ GDIL+F+TGQ++I +L +R
Sbjct: 678 AIQIHVSDNNYDNNFGDILIFMTGQEDINATCYLLSER 715
Score = 511 (184.9 bits), Expect = 3.3e-104, Sum P(2) = 3.3e-104
Identities = 111/285 (38%), Positives = 167/285 (58%)
Query: 295 ICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPK 354
I PIY+ L +E Q+KIF+ RK++++TNIAETSLT+DGIKYVI G+ K+K YN
Sbjct: 774 IFPIYSQLSSEQQSKIFKKYD--LRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQT 831
Query: 355 TGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYH-RIWMTIL--CQKYN--EL 409
GM+ L V PIS+A+ANQR+G + RTG G C+RLYT + + ++ + Q+ N +
Sbjct: 832 IGMDVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDLYQNNIPEIQRSNLSNV 891
Query: 410 IWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPK 469
+ + SL L FDFID P GA+N G LT +GR+M +FP+DP
Sbjct: 892 VLLLKSLHVQNLFEFDFIDVPSKESIINSLHELWVLGAINNEGNLTDIGRKMVQFPLDPP 951
Query: 470 LSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALL 529
LSK ++ ++C+ EI+ I +ML SIF K+ ++ + F + + D + LL
Sbjct: 952 LSKIVIYSQNFQCTKEILIIVSMLS-SPSIFLESKENNESIESKKEKFTVPE-SDHLTLL 1009
Query: 530 RVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVEI 574
+Y WR NYS WC +N+IQ ++ +A+++ QL + + I
Sbjct: 1010 NIYLQWRSHNYSYSWCTKNFIQYKALNKAKEVYSQLIDIIKTLNI 1054
>DICTYBASE|DDB_G0270110 [details] [associations]
symbol:dhx33 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0270110 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14781 RefSeq:XP_646548.1
EnsemblProtists:DDB0233404 GeneID:8617514 KEGG:ddi:DDB_G0270110
InParanoid:Q55CD3 OMA:EICINRE Uniprot:Q55CD3
Length = 730
Score = 1017 (363.1 bits), Expect = 1.3e-102, P = 1.3e-102
Identities = 214/484 (44%), Positives = 320/484 (66%)
Query: 103 EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
+PR VAA+S++ RVSQEMGV+LG +VGY +RF+D T++KT LKYMTD ML+RE +++ SL
Sbjct: 125 QPRRVAAVSISKRVSQEMGVELGDQVGYCVRFDDKTNEKTKLKYMTDGMLVREAMLDSSL 184
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPD---LKLLISSATLDAEKFSDYFGSAP 219
YSV+I+DEA ERTL+TD LFGLLK + R LK++I SATLDAE FS YF +AP
Sbjct: 185 SKYSVIILDEAHERTLNTDVLFGLLKSIQKRREKKNPLKIIIMSATLDAELFSQYFNNAP 244
Query: 220 IFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHV------------NEPTGDILVFLT 267
+ I GR++PV+++YT+ + DY++AA++T LQIH+ E GDILVFLT
Sbjct: 245 VLYIEGRQFPVQIYYTEEIQKDYVDAALITVLQIHIAHLTDKSINKEEEEDGGDILVFLT 304
Query: 268 GQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNI 327
G+DEIE E++L R L +LI+CPI++ LP E Q K+FE P+ +RKV+LATNI
Sbjct: 305 GRDEIENLEKLLLDRIPRLPVGSKDLIVCPIFSALPQEQQMKVFEKAPKGSRKVILATNI 364
Query: 328 AETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFR 387
AETSLTI+GI+YV+ G K K +NPK G++SL + PISKASA QRTG + R GKC+R
Sbjct: 365 AETSLTINGIRYVVDSGAVKSKIFNPKIGIDSLNIIPISKASAKQRTGRAGREFEGKCYR 424
Query: 388 LYTLHNYHRIWMTIL--CQKYN--ELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXX 443
LYT + ++ + + ++ N +I ++ ++ N +++FDF++ P
Sbjct: 425 LYTQETFEKLDTSSIPEIKRSNIANVILQLKTIGINDILSFDFLESPPVASVIKSLELLF 484
Query: 444 XXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRP 503
A++ G LT +G++MA FP+DP SKT++ +++CS+E++ I ++L V SIF+ P
Sbjct: 485 CLDAISDNGSLTELGKKMALFPLDPMYSKTLIKSIEFECSEEVLIIISILSV-ESIFFTP 543
Query: 504 KDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECN--YSTEWCRENYIQVSSMKRARDI 561
K+K+ ++ + F D GD I L V+ +++ +WC +++I + SM + ++
Sbjct: 544 KEKKKEVEDVKKIFFSPD-GDHITFLNVFREFQKSKPQQQQQWCFDHFINLKSMIKVLNV 602
Query: 562 RDQL 565
+QL
Sbjct: 603 FEQL 606
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 123/261 (47%), Positives = 175/261 (67%)
Query: 14 KCTFEIEDKIVDF---FSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTLPIYPFW 70
K FE++ K V ++ + D +N + E+P K + K LQ+E +LP++
Sbjct: 26 KGKFELKKKPVQLQQISNDKINDNNNLKN-QLEIP-KEIPKEI--KLQKE--SLPVFTAK 79
Query: 71 EELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE-------------PRWVAAMSVAARVS 117
+ LL+ + + I+ ETG+GKTTQIPQYLYE PR VAA+S++ RVS
Sbjct: 80 DALLKNFKEHSTVIIISETGTGKTTQIPQYLYENGYKDNGIIAITQPRRVAAVSISKRVS 139
Query: 118 QEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERT 177
QEMGV+LG +VGY +RF+D T++KT LKYMTD ML+RE +++ SL YSV+I+DEA ERT
Sbjct: 140 QEMGVELGDQVGYCVRFDDKTNEKTKLKYMTDGMLVREAMLDSSLSKYSVIILDEAHERT 199
Query: 178 LSTDNLFGLLKDLINYRPD---LKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFY 234
L+TD LFGLLK + R LK++I SATLDAE FS YF +AP+ I GR++PV+++Y
Sbjct: 200 LNTDVLFGLLKSIQKRREKKNPLKIIIMSATLDAELFSQYFNNAPVLYIEGRQFPVQIYY 259
Query: 235 TKAPEVDYIEAAIVTALQIHV 255
T+ + DY++AA++T LQIH+
Sbjct: 260 TEEIQKDYVDAALITVLQIHI 280
>TAIR|locus:2197965 [details] [associations]
symbol:AT1G26370 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
IPI:IPI00532541 RefSeq:NP_173961.3 UniGene:At.15978
ProteinModelPortal:F4IE66 SMR:F4IE66 PRIDE:F4IE66
EnsemblPlants:AT1G26370.1 GeneID:839179 KEGG:ath:AT1G26370
OMA:ADISTNI Uniprot:F4IE66
Length = 717
Score = 681 (244.8 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 148/342 (43%), Positives = 209/342 (61%)
Query: 197 LKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVN 256
LKL+I SA+LDA FS+YFG A + GR++PV++ YT PE DY++A +VT QIH
Sbjct: 229 LKLIIMSASLDARVFSEYFGGAKAVHVQGRQFPVDILYTVHPESDYVDATLVTIFQIHFE 288
Query: 257 EPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPE 316
E GDILVFLTGQDEIE E ++++R + + +L+ I++ LP+E Q K+F P P
Sbjct: 289 EKPGDILVFLTGQDEIESVERLVQERLQNIPEDKRKLLPLAIFSALPSEQQMKVFAPAPT 348
Query: 317 RARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGL 376
RKV+LATNIAETS+TI GI+YVI PGF K +SY+P GMESL V P SKA QR+G
Sbjct: 349 GFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGMESLDVVPASKAQTLQRSGR 408
Query: 377 SERTGPGKCFRLYTLHNYHRIWMTIL-----CQKYNELIWKMLSLFSNVLVNFDFIDPPX 431
+ R GPGK FRLY + ++ + C N +I ++ +L + +V FDFID P
Sbjct: 409 AGREGPGKSFRLYPEREFEKLEDSTKPEIKRCNLSN-IILQLKALGIDDIVGFDFIDKPS 467
Query: 432 XXXXXXXXXXXXXXGALNKAGQLTR-VGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIA 490
GAL G+L VG QM+ P++P SK ++ +++ C +E++
Sbjct: 468 RGAIIKALAELHSLGALADDGKLENPVGYQMSRLPLEPVYSKALILANQFNCLEEMLITV 527
Query: 491 AMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVY 532
A+L V SIFY P++K+ A ++ +F + GD + L VY
Sbjct: 528 AVLSV-ESIFYDPREKREEARTSKNHFASVE-GDHLTYLSVY 567
Score = 339 (124.4 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 75/153 (49%), Positives = 103/153 (67%)
Query: 52 STLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLY--------- 102
S + + E R++LPI + L++ V +L IVGETGSGKTTQ+PQ+LY
Sbjct: 29 SMRQKIAEHRRSLPIASVEKRLVEEVQKNDILIIVGETGSGKTTQLPQFLYNAGFCREGK 88
Query: 103 -----EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIV 157
+PR +AA++VA RV++E V+LG +VGYSIRF+D TS T LKYMTD +LLRE +
Sbjct: 89 MIGITQPRRIAAVTVAKRVAEECEVQLGQKVGYSIRFDDTTSGSTRLKYMTDGLLLREAL 148
Query: 158 IEPSLESYSVLIVDEAQERTLSTDNLFGLLKDL 190
++P L YSV+IVDEA +R++ TD L LLK +
Sbjct: 149 LDPHLSRYSVIIVDEAHDRSVHTDVLLALLKKI 181
Score = 198 (74.8 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 58/194 (29%), Positives = 93/194 (47%)
Query: 403 CQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTR-VGRQM 461
C N +I ++ +L + +V FDFID P GAL G+L VG QM
Sbjct: 440 CNLSN-IILQLKALGIDDIVGFDFIDKPSRGAIIKALAELHSLGALADDGKLENPVGYQM 498
Query: 462 AEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGD 521
+ P++P SK ++ +++ C +E++ A+L V SIFY P++K+ A ++ +F +
Sbjct: 499 SRLPLEPVYSKALILANQFNCLEEMLITVAVLSV-ESIFYDPREKREEARTSKNHFASVE 557
Query: 522 VGDRIALLRVYNCWREC-----------NYST---EWCRENYIQVSSMKRARDIRDQLEG 567
GD + L VY E N +WC+ENY+ S+K ARDI Q+
Sbjct: 558 -GDHLTYLSVYRESDEFLEKRKAAGSGNNIDKIMKKWCKENYVNSRSLKHARDIYRQIRE 616
Query: 568 LFARVEIDTSIYSN 581
++ + S N
Sbjct: 617 HVEQIGFNVSSCGN 630
>ZFIN|ZDB-GENE-070410-11 [details] [associations]
symbol:zgc:158828 "zgc:158828" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-070410-11
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 OrthoDB:EOG4V9TQ5
EMBL:BC117646 IPI:IPI00851766 UniGene:Dr.86097 Uniprot:Q1ECW4
Length = 691
Score = 963 (344.1 bits), Expect = 6.6e-97, P = 6.6e-97
Identities = 212/508 (41%), Positives = 315/508 (62%)
Query: 87 GETGSGKTTQIPQYLYEPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDK-TVLK 145
G GK + Q PR VAA SVA RV++E G LGHEVGY+IRF+DC+ T +K
Sbjct: 85 GWAAEGKVIGVTQ----PRRVAATSVATRVAEERGAFLGHEVGYTIRFDDCSDPHATRIK 140
Query: 146 YMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSAT 205
++TD ML+RE++ +P L+ YSVLI+DEA ERTL TD GLLK ++ R DL+L+++SAT
Sbjct: 141 FLTDGMLVREMMSDPLLKKYSVLILDEAHERTLYTDIAIGLLKKILKKRRDLRLIVASAT 200
Query: 206 LDAEKFSDYF-----GSAP-----IFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHV 255
LDA+KF D+F G A I + GR +PV++FYT +P DY++A + T L+IH
Sbjct: 201 LDAKKFQDFFNLNESGDASKDTCGILTVEGRTFPVDIFYTVSPVPDYVKATVETVLKIHE 260
Query: 256 NEPTGDILVFLTGQDEIERAEEILKQRTRGL---GTKIAELIICPIYANLPTELQAKIFE 312
E GD+L FLTGQ+E+E+ +L+++ R L G K L + P+YA LP Q ++FE
Sbjct: 261 TEDDGDVLAFLTGQEEVEKVVSLLQEQARTLSRYGMK-KHLCVLPMYAGLPYNEQMRVFE 319
Query: 313 PTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQ 372
RKVV+ATNIAETS+TI+G+ +VI F K+++YNP+T +ESL+V PISKASA Q
Sbjct: 320 RMAPTVRKVVVATNIAETSITINGVVFVIDCAFVKIRAYNPRTAIESLIVTPISKASACQ 379
Query: 373 RTGLSERTGPGKCFRLYTLHNYHRIWMTIL--CQKYN--ELIWKMLSL-FSNVLVNFDFI 427
R G + R GKCFRLYT ++ ++ + + Q+ N +I ++ +L NVL F F+
Sbjct: 380 RAGRAGRNRAGKCFRLYTEEDFEKLPESTVPEMQRSNLAPVILQLKALGIDNVL-RFSFL 438
Query: 428 DPPXXXXXXXXXXXXXXXGALNKAGQLTR-VGRQMAEFPIDPKLSKTIVSLDKYKCSDEI 486
PP G L++ G+LT +G +MAEFP+ P +K ++ + CS EI
Sbjct: 439 SPPPAQSMVQALELLFALGGLDQYGRLTDPMGVRMAEFPLSPMFAKMLLESGNFGCSKEI 498
Query: 487 ITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCR 546
+TIAAM+ + N IF P +++ A F + + GD + +L VY + + S++WC+
Sbjct: 499 VTIAAMMQIQN-IFVAPHNQRKSAAREHRKFAVAE-GDHLTMLNVYEAFIKHQKSSQWCQ 556
Query: 547 ENYIQVSSMKRARDIRDQLEGLFARVEI 574
++++ + RA +R+QL L + ++
Sbjct: 557 DHFLNYKGLLRATAVREQLRHLLNKFKV 584
Score = 417 (151.9 bits), Expect = 1.8e-38, P = 1.8e-38
Identities = 88/174 (50%), Positives = 121/174 (69%)
Query: 57 LQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------------- 103
++++R+ LP++ +L V + + IVGETGSGK+TQIPQYL E
Sbjct: 37 IEKQRQRLPVFKHRNNILYLVESFQTVVIVGETGSGKSTQIPQYLLEAGWAAEGKVIGVT 96
Query: 104 -PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDK-TVLKYMTDCMLLREIVIEPS 161
PR VAA SVA RV++E G LGHEVGY+IRF+DC+ T +K++TD ML+RE++ +P
Sbjct: 97 QPRRVAATSVATRVAEERGAFLGHEVGYTIRFDDCSDPHATRIKFLTDGMLVREMMSDPL 156
Query: 162 LESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYF 215
L+ YSVLI+DEA ERTL TD GLLK ++ R DL+L+++SATLDA+KF D+F
Sbjct: 157 LKKYSVLILDEAHERTLYTDIAIGLLKKILKKRRDLRLIVASATLDAKKFQDFF 210
>UNIPROTKB|E1BYA5 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000182 "rDNA binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AADN02025994
IPI:IPI00823199 Ensembl:ENSGALT00000002492 ArrayExpress:E1BYA5
Uniprot:E1BYA5
Length = 660
Score = 963 (344.1 bits), Expect = 6.6e-97, P = 6.6e-97
Identities = 206/504 (40%), Positives = 311/504 (61%)
Query: 88 ETGSGKTTQIPQYLYEPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYM 147
E G G+ I + +PR VAA+S+A RVS E +LG VGY++RF+D TSD+T +K++
Sbjct: 63 EAGIGRQGIIA--VTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDLTSDETRIKFL 120
Query: 148 TDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDL-----KLLIS 202
TD MLLRE + +P L YSV+I+DEA ERT+ TD LFG++K R +L K+++
Sbjct: 121 TDGMLLREAIGDPILRKYSVVILDEAHERTIHTDVLFGVVKAAQKKRKELGKLPLKVIVM 180
Query: 203 SATLDAEKFSDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTG-D 261
SAT+D ++FS YF AP+ + GR++P+++FYTK P+ DY++AA+V+ QIH P+ D
Sbjct: 181 SATMDVDQFSQYFNGAPVLYLEGRQHPIQVFYTKQPQSDYLQAALVSVFQIHQEAPSSQD 240
Query: 262 ILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKV 321
ILVFLTGQ+EIE + + + L ++ + P+YA+LP Q ++F+ P+ RKV
Sbjct: 241 ILVFLTGQEEIEAMTKTCRDIAKHLPDGCPQMTVMPLYASLPYSQQLRVFQAAPKGCRKV 300
Query: 322 VLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTG 381
+L+TNIAETS+TI GIKYV+ G K K YNP+ G+E L V +SKA A QRTG + R
Sbjct: 301 ILSTNIAETSITISGIKYVVDTGMVKAKKYNPEIGLEVLAVQRVSKAQAWQRTGRAGRED 360
Query: 382 PGKCFRLYTLHNYHRI-WMTI-----LCQ-KYNELIWKMLSL-FSNVLVNFDFIDPPXXX 433
G C+RLYT + + MT+ LC+ ++ ++L+L N+L FDF+ P
Sbjct: 361 SGICYRLYTEDEFEKFDKMTVPEIQSLCRCNLASVLLQLLALRIPNILT-FDFMSKPSPD 419
Query: 434 XXXXXXXXXXXXGALN-KAGQL--TRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIA 490
GA+ K QL T +GR+MA FP++PK SKTI+ K+ C++EI+TI
Sbjct: 420 AIQAAIEQLDLLGAVEQKEDQLVLTPLGRKMAAFPLEPKFSKTILLSPKFHCTEEILTIV 479
Query: 491 AMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYI 550
++L V +S+ Y P ++ + R F + GD + LL VY ++ + + EWC+EN++
Sbjct: 480 SLLSV-DSVLYNPPARRDEVQSVRKKF-ISSEGDHLTLLNVYRAFKNVSGNKEWCKENFV 537
Query: 551 QVSSMKRARDIRDQLEGLFARVEI 574
+M D+R QL + ++ +
Sbjct: 538 NGRNMMLVSDVRAQLRDICVKLSM 561
Score = 342 (125.4 bits), Expect = 2.6e-28, P = 2.6e-28
Identities = 80/170 (47%), Positives = 106/170 (62%)
Query: 60 ERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE-------------PRW 106
+R+ LPI+ LL + G ++GETGSGKTTQIPQYLYE PR
Sbjct: 20 QRRELPIFQARGPLLSQLRGLECAVLIGETGSGKTTQIPQYLYEAGIGRQGIIAVTQPRR 79
Query: 107 VAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYS 166
VAA+S+A RVS E +LG VGY++RF+D TSD+T +K++TD MLLRE + +P L YS
Sbjct: 80 VAAISLATRVSDEKRTELGKLVGYTVRFDDLTSDETRIKFLTDGMLLREAIGDPILRKYS 139
Query: 167 VLIVDEAQERTLSTDNLFGLLKDLINYRPDL-KLLISSATLDAEKFSDYF 215
V+I+DEA ERT+ TD LFG++K R +L KL + + A D F
Sbjct: 140 VVILDEAHERTIHTDVLFGVVKAAQKKRKELGKLPLKVIVMSATMDVDQF 189
>UNIPROTKB|E1BDN4 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP CTD:60625
EMBL:DAAA02036576 EMBL:DAAA02036577 EMBL:DAAA02036578
IPI:IPI00707123 RefSeq:NP_001179272.1 UniGene:Bt.52291
Ensembl:ENSBTAT00000005281 GeneID:513148 KEGG:bta:513148
NextBio:20870723 Uniprot:E1BDN4
Length = 703
Score = 959 (342.6 bits), Expect = 1.8e-96, P = 1.8e-96
Identities = 210/511 (41%), Positives = 319/511 (62%)
Query: 83 LAIVGETGSGKTTQIPQYLYEPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSD-K 141
LA G T G+ + Q PR VAA++VA RV++E G LGHEVGY IRF+DCT+
Sbjct: 91 LAEAGWTAEGRVVGVTQ----PRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTNPLA 146
Query: 142 TVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLI 201
T +K++TD ML+RE++++P L YS +++DEA ERTL TD GLLK + R DL+L++
Sbjct: 147 TRIKFLTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIV 206
Query: 202 SSATLDAEKFSDYFG----SAP------IFKIPGRRYPVELFYTKAPEVDYIEAAIVTAL 251
+SATLDAEKF D+F S P I + GR +PV++FY ++P DYI++ + T +
Sbjct: 207 ASATLDAEKFRDFFNHNDTSDPTRDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVM 266
Query: 252 QIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLG-TKIAE-LIICPIYANLPTELQAK 309
+IH E GDIL FLTGQ+E+E +L ++ R LG T + L I P+YA LP+ Q K
Sbjct: 267 KIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGQTGMKRHLRILPMYAGLPSFEQMK 326
Query: 310 IFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKAS 369
+FE RKV++ATN+AETS+TI GI YVI GF K+++YNP+T +E L+V P+S+AS
Sbjct: 327 VFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQAS 386
Query: 370 ANQRTGLSERTGPGKCFRLYTLHNYHRIWMTIL--CQKYN--ELIWKMLSL-FSNVLVNF 424
ANQR G R+ GKC+RLYT + ++ + + Q+ N +I ++ +L NVL F
Sbjct: 387 ANQRAGRGGRSRSGKCYRLYTEEAFDQLPQSTVPEMQRSNLAPVILQLKALGIDNVL-RF 445
Query: 425 DFIDPPXXXXXXXXXXXXXXXGALNKAGQLTR-VGRQMAEFPIDPKLSKTIVSLDKYKCS 483
F+ PP G L+K +LT +G ++AEFP++P +K ++ + CS
Sbjct: 446 HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCS 505
Query: 484 DEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTE 543
EI++IAAM+ + N +F P +++ A A F + + GD + +L VY + + N +++
Sbjct: 506 QEILSIAAMMQIQN-VFVVPSNQKSQAIRAHRKFAVEE-GDHLTMLNVYEAFIKHNKNSQ 563
Query: 544 WCRENYIQVSSMKRARDIRDQLEGLFARVEI 574
WC+E+++ + RA +R+QL+ L + ++
Sbjct: 564 WCQEHFLNYKGLVRAATVREQLKKLLVKFQV 594
Score = 410 (149.4 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 84/174 (48%), Positives = 119/174 (68%)
Query: 57 LQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------------- 103
++++R+ LP++ +L + Y + I+GETG GK+TQIPQYL E
Sbjct: 47 IEQQRQKLPVFKLRNHILYLIENYQTVVIIGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 104 -PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSD-KTVLKYMTDCMLLREIVIEPS 161
PR VAA++VA RV++E G LGHEVGY IRF+DCT+ T +K++TD ML+RE++++P
Sbjct: 107 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTNPLATRIKFLTDGMLVREMMVDPL 166
Query: 162 LESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYF 215
L YS +++DEA ERTL TD GLLK + R DL+L+++SATLDAEKF D+F
Sbjct: 167 LTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFF 220
>UNIPROTKB|F5GXM6 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K13117 EMBL:AL023803
UniGene:Hs.444520 DNASU:60625 GeneID:60625 KEGG:hsa:60625 CTD:60625
HGNC:HGNC:15861 GenomeRNAi:60625 NextBio:65461 IPI:IPI00513682
RefSeq:NP_001177738.1 ProteinModelPortal:F5GXM6 SMR:F5GXM6
Ensembl:ENST00000373323 UCSC:uc010zwc.2 ArrayExpress:F5GXM6
Bgee:F5GXM6 Uniprot:F5GXM6
Length = 672
Score = 959 (342.6 bits), Expect = 1.8e-96, P = 1.8e-96
Identities = 217/558 (38%), Positives = 336/558 (60%)
Query: 42 SELPNKSVVKSTLEMLQEERKTLPIY-PFW----EELLQAVSGYPVLAIVGETGSGKTTQ 96
+E P S+ + + L E T +Y P+ E+ Q + + LA G T G+
Sbjct: 15 TEGPGVSISEER-QSLAENSGTTVVYNPYAALSIEQQRQKLPVFKYLAEAGWTAEGRVVG 73
Query: 97 IPQYLYEPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSD-KTVLKYMTDCMLLRE 155
+ Q PR VAA++VA RV++E G LGHEVGY IRF+DCT T +K++TD ML+RE
Sbjct: 74 VTQ----PRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVRE 129
Query: 156 IVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYF 215
++++P L YSV+++DEA ERTL TD GLLK + R DL+L+++SATLDA+KF D+F
Sbjct: 130 MMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFF 189
Query: 216 G----SAP------IFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVF 265
S P I + GR +PV++FY ++P DYI++ + T ++IH E GD+L F
Sbjct: 190 NQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAF 249
Query: 266 LTGQDEIERAEEILKQRTRGL---GTKIAELIICPIYANLPTELQAKIFEPTPERARKVV 322
LTGQ+E+E +L ++ R L G K L + P+YA LP+ Q K+FE RKV+
Sbjct: 250 LTGQEEVETVVSMLIEQARALARTGMK-RHLRVLPMYAGLPSFEQMKVFERVSRSVRKVI 308
Query: 323 LATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGP 382
+ATN+AETS+TI GI YVI GF K+++YNP+T +E L+V P+S+ASANQR G R+
Sbjct: 309 VATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRS 368
Query: 383 GKCFRLYTLHNYHRIWMTIL--CQKYN--ELIWKMLSL-FSNVLVNFDFIDPPXXXXXXX 437
GKC+RLYT + ++ + + Q+ N +I ++ +L NVL F F+ PP
Sbjct: 369 GKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKALGIDNVL-RFHFMSPPPAQSMVQ 427
Query: 438 XXXXXXXXGALNKAGQLTR-VGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVG 496
G L+K +LT +G ++AEFP++P +K ++ + CS EI++IAAM+ +
Sbjct: 428 ALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQ 487
Query: 497 NSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMK 556
N IF P +++ +A F + + GD + +L +Y + + N ++WC+E+++ +
Sbjct: 488 N-IFVVPPNQKSHAIRVHRKFAVEE-GDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLV 545
Query: 557 RARDIRDQLEGLFARVEI 574
RA +R+QL+ L + ++
Sbjct: 546 RAATVREQLKKLLVKFQV 563
>RGD|1311165 [details] [associations]
symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box polypeptide 35"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1311165 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104241 KO:K13117
OMA:NIFVVPP CTD:60625 EMBL:CH474005 IPI:IPI00764730
RefSeq:NP_001102071.1 UniGene:Rn.118078 Ensembl:ENSRNOT00000021435
GeneID:362260 KEGG:rno:362260 UCSC:RGD:1311165 NextBio:679233
Uniprot:D4AEG5
Length = 679
Score = 958 (342.3 bits), Expect = 2.2e-96, P = 2.2e-96
Identities = 208/511 (40%), Positives = 315/511 (61%)
Query: 83 LAIVGETGSGKTTQIPQYLYEPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSD-K 141
LA G T G+ + Q PR VAA++VA RV+ E G LGHEVGY IRF+DCT
Sbjct: 91 LAEAGWTAEGRVVGVTQ----PRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPLA 146
Query: 142 TVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLI 201
T +K++TD ML+RE++++P L YSV+++DEA ERTL TD GLLK + R DL+L++
Sbjct: 147 TRIKFLTDGMLVREMMVDPLLTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIV 206
Query: 202 SSATLDAEKFSDYFG----SAP------IFKIPGRRYPVELFYTKAPEVDYIEAAIVTAL 251
+SATLDAEKF D+F S P I + GR +PV++FY ++P DYI+A + T +
Sbjct: 207 ASATLDAEKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKATVDTVV 266
Query: 252 QIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGL---GTKIAELIICPIYANLPTELQA 308
+IH E GDIL FLTGQ+E+E +L ++ R L G K L + P+YA LP+ Q
Sbjct: 267 KIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGMK-KHLRVLPMYAGLPSFEQM 325
Query: 309 KIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKA 368
K+FE RKV++ATN+AETS+TI GI YVI GF K+++YNP+T +E L+V P+S+A
Sbjct: 326 KVFERVSHSVRKVIVATNVAETSITISGIVYVIDCGFMKLRAYNPRTAIECLVVVPVSQA 385
Query: 369 SANQRTGLSERTGPGKCFRLYTLHNYHRIWMTIL--CQKYN--ELIWKMLSLFSNVLVNF 424
SANQR G R GKC+RLYT + ++ + + Q+ N ++ ++ +L + ++ F
Sbjct: 386 SANQRAGRGGRNRSGKCYRLYTEEAFEQLPQSTVPEMQRSNLAPVVLQLKALGIDSVLRF 445
Query: 425 DFIDPPXXXXXXXXXXXXXXXGALNKAGQLTR-VGRQMAEFPIDPKLSKTIVSLDKYKCS 483
F+ PP G L+K +LT +G ++AEFP++P +K ++ + CS
Sbjct: 446 HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCS 505
Query: 484 DEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTE 543
EI++IAAM+ + N +F P +++ A F + + GD + +L VY + + N S++
Sbjct: 506 QEILSIAAMMQIQN-VFVFPSNQKSQATRVHRKFAVEE-GDHLTMLNVYEAFIKHNKSSQ 563
Query: 544 WCRENYIQVSSMKRARDIRDQLEGLFARVEI 574
WC+E+++ + RA +RDQL+ L + ++
Sbjct: 564 WCQEHFLNYKGLVRAATVRDQLKKLLVKFQV 594
Score = 411 (149.7 bits), Expect = 6.7e-37, P = 6.7e-37
Identities = 86/174 (49%), Positives = 118/174 (67%)
Query: 57 LQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------------- 103
++++R+ LP++ +L V Y + IVGETG GK+TQ+PQYL E
Sbjct: 47 IEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGWTAEGRVVGVT 106
Query: 104 -PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSD-KTVLKYMTDCMLLREIVIEPS 161
PR VAA++VA RV+ E G LGHEVGY IRF+DCT T +K++TD ML+RE++++P
Sbjct: 107 QPRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPL 166
Query: 162 LESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYF 215
L YSV+++DEA ERTL TD GLLK + R DL+L+++SATLDAEKF D+F
Sbjct: 167 LTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFF 220
>UNIPROTKB|D3ZZG1 [details] [associations]
symbol:Dhx35 "Protein Dhx35" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1311165 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00951610
Ensembl:ENSRNOT00000068625 OrthoDB:EOG4V9TQ5 ArrayExpress:D3ZZG1
Uniprot:D3ZZG1
Length = 703
Score = 958 (342.3 bits), Expect = 2.2e-96, P = 2.2e-96
Identities = 208/511 (40%), Positives = 315/511 (61%)
Query: 83 LAIVGETGSGKTTQIPQYLYEPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSD-K 141
LA G T G+ + Q PR VAA++VA RV+ E G LGHEVGY IRF+DCT
Sbjct: 91 LAEAGWTAEGRVVGVTQ----PRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPLA 146
Query: 142 TVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLI 201
T +K++TD ML+RE++++P L YSV+++DEA ERTL TD GLLK + R DL+L++
Sbjct: 147 TRIKFLTDGMLVREMMVDPLLTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIV 206
Query: 202 SSATLDAEKFSDYFG----SAP------IFKIPGRRYPVELFYTKAPEVDYIEAAIVTAL 251
+SATLDAEKF D+F S P I + GR +PV++FY ++P DYI+A + T +
Sbjct: 207 ASATLDAEKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKATVDTVV 266
Query: 252 QIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGL---GTKIAELIICPIYANLPTELQA 308
+IH E GDIL FLTGQ+E+E +L ++ R L G K L + P+YA LP+ Q
Sbjct: 267 KIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGMK-KHLRVLPMYAGLPSFEQM 325
Query: 309 KIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKA 368
K+FE RKV++ATN+AETS+TI GI YVI GF K+++YNP+T +E L+V P+S+A
Sbjct: 326 KVFERVSHSVRKVIVATNVAETSITISGIVYVIDCGFMKLRAYNPRTAIECLVVVPVSQA 385
Query: 369 SANQRTGLSERTGPGKCFRLYTLHNYHRIWMTIL--CQKYN--ELIWKMLSLFSNVLVNF 424
SANQR G R GKC+RLYT + ++ + + Q+ N ++ ++ +L + ++ F
Sbjct: 386 SANQRAGRGGRNRSGKCYRLYTEEAFEQLPQSTVPEMQRSNLAPVVLQLKALGIDSVLRF 445
Query: 425 DFIDPPXXXXXXXXXXXXXXXGALNKAGQLTR-VGRQMAEFPIDPKLSKTIVSLDKYKCS 483
F+ PP G L+K +LT +G ++AEFP++P +K ++ + CS
Sbjct: 446 HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCS 505
Query: 484 DEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTE 543
EI++IAAM+ + N +F P +++ A F + + GD + +L VY + + N S++
Sbjct: 506 QEILSIAAMMQIQN-VFVFPSNQKSQATRVHRKFAVEE-GDHLTMLNVYEAFIKHNKSSQ 563
Query: 544 WCRENYIQVSSMKRARDIRDQLEGLFARVEI 574
WC+E+++ + RA +RDQL+ L + ++
Sbjct: 564 WCQEHFLNYKGLVRAATVRDQLKKLLVKFQV 594
Score = 411 (149.7 bits), Expect = 8.1e-37, P = 8.1e-37
Identities = 86/174 (49%), Positives = 118/174 (67%)
Query: 57 LQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------------- 103
++++R+ LP++ +L V Y + IVGETG GK+TQ+PQYL E
Sbjct: 47 IEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGWTAEGRVVGVT 106
Query: 104 -PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSD-KTVLKYMTDCMLLREIVIEPS 161
PR VAA++VA RV+ E G LGHEVGY IRF+DCT T +K++TD ML+RE++++P
Sbjct: 107 QPRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPL 166
Query: 162 LESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYF 215
L YSV+++DEA ERTL TD GLLK + R DL+L+++SATLDAEKF D+F
Sbjct: 167 LTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFF 220
>UNIPROTKB|G4MKC3 [details] [associations]
symbol:MGG_02518 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:CM001231 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K13117 RefSeq:XP_003709326.1 EnsemblFungi:MGG_02518T0
GeneID:2681615 KEGG:mgr:MGG_02518 Uniprot:G4MKC3
Length = 671
Score = 955 (341.2 bits), Expect = 4.7e-96, P = 4.7e-96
Identities = 209/503 (41%), Positives = 312/503 (62%)
Query: 103 EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
+PR +AA +VA RV++E G ++G EVGYSIRFED TS+ T +K++TD +L+RE +++P L
Sbjct: 74 QPRRIAATTVALRVAEEYGSEVGKEVGYSIRFEDVTSEATRIKFLTDGLLIREALVDPLL 133
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSA---- 218
YS+++VDEA ER++STD L GLLK + RP+L+++ISSATL AE+F +F S
Sbjct: 134 SRYSIVMVDEAHERSVSTDILLGLLKKIRKKRPELRIIISSATLQAEQFLAFFSSTLGGS 193
Query: 219 ------P------IFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFL 266
P I + GR YP+++ Y ++P DY++ A+ T L +H NEP GDILVFL
Sbjct: 194 RQDREEPQGTIGTIVSLEGRTYPIDILYLESPAEDYLQRAVSTVLDVHENEPDGDILVFL 253
Query: 267 TGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATN 326
TG+DEIE A + + +RT L ++ L+ P+++ L TE Q IFE P RKV+ +TN
Sbjct: 254 TGRDEIEAAVDAVSERTAHLTSQDRGLLPLPLFSGLSTEQQMYIFEEAPANTRKVIFSTN 313
Query: 327 IAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCF 386
IAE S+TI GI YV+ GF K+++YNPKTG+E+L PISKA+A QR G + RT PGKCF
Sbjct: 314 IAEASVTISGIVYVVDSGFVKLRAYNPKTGIETLTAVPISKAAAAQRAGRAGRTKPGKCF 373
Query: 387 RLYTLHNYHRIWMTIL--CQKYN--ELIWKMLSL-FSNVLVNFDFIDPPXXXXXXXXXXX 441
RLYT +Y + T + Q+ N I ++ +L NVL +FDF+ PP
Sbjct: 374 RLYTEESYTSLSDTNIPEVQRSNLAPFILQLKALGIDNVL-HFDFLTPPPAELMTKALEL 432
Query: 442 XXXXGALNKAGQLTR-VGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIF 500
GAL+ +LT+ +G +MAE +DP ++KT++S + + C E++TIAAM G ++
Sbjct: 433 LYSLGALDDYAKLTKPLGLRMAELAVDPMMAKTLLSAESFGCLSEMLTIAAMTSAGGDVW 492
Query: 501 YRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCW-RECNYSTEWCRENYIQVSSMKRAR 559
+ + ++ ++ R F G+ GD + L VY + + + +C EN + +M RA
Sbjct: 493 IQHEGERKQFESRRRKFAAGE-GDHLTFLNVYQAFVTKGRKESGFCHENLLNYKTMSRAV 551
Query: 560 DIRDQLEGLFAR--VEIDTSIYS 580
IR QL+ R + +D ++ S
Sbjct: 552 SIRAQLKRYLERFGIRVDETLAS 574
Score = 396 (144.5 bits), Expect = 9.7e-35, P = 9.7e-35
Identities = 86/180 (47%), Positives = 120/180 (66%)
Query: 52 STLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLY--------- 102
S + L + LPI + LL V PV +VG+TGSGKTTQIPQ+L
Sbjct: 9 SFIPALHKPSSLLPIARHKDSLLYVVESNPVTVVVGQTGSGKTTQIPQFLEKAGWCSDGK 68
Query: 103 -----EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIV 157
+PR +AA +VA RV++E G ++G EVGYSIRFED TS+ T +K++TD +L+RE +
Sbjct: 69 LIGVTQPRRIAATTVALRVAEEYGSEVGKEVGYSIRFEDVTSEATRIKFLTDGLLIREAL 128
Query: 158 IEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGS 217
++P L YS+++VDEA ER++STD L GLLK + RP+L+++ISSATL AE+F +F S
Sbjct: 129 VDPLLSRYSIVMVDEAHERSVSTDILLGLLKKIRKKRPELRIIISSATLQAEQFLAFFSS 188
>SGD|S000001794 [details] [associations]
symbol:PRP16 "DEAH-box RNA helicase involved in second
catalytic step of splicing" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=IMP]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0071007 "U2-type catalytic step 2 spliceosome" evidence=IDA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001794 GO:GO:0005524 GO:GO:0003676
EMBL:BK006944 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0071007 EMBL:Z27116 GO:GO:0008186
RefSeq:NP_013012.3 GeneID:853961 KEGG:sce:YKR086W KO:K12815
GO:GO:0000350 GeneTree:ENSGT00700000104877 OrthoDB:EOG4GQTD2
EMBL:M31524 EMBL:Z28311 PIR:S38164 RefSeq:NP_013014.3
ProteinModelPortal:P15938 SMR:P15938 DIP:DIP-2824N IntAct:P15938
MINT:MINT-1699731 STRING:P15938 PaxDb:P15938 PeptideAtlas:P15938
EnsemblFungi:YKR086W GeneID:853963 KEGG:sce:YKR088C CYGD:YKR086w
OMA:IDCGYSK NextBio:975386 Genevestigator:P15938 GermOnline:YKR086W
Uniprot:P15938
Length = 1071
Score = 955 (341.2 bits), Expect = 4.7e-96, P = 4.7e-96
Identities = 228/548 (41%), Positives = 332/548 (60%)
Query: 57 LQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------------- 103
++ ++ LP++ +LL + V+ I+GETGSGKTTQ+ QYLYE
Sbjct: 343 IKHTKEQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYANDRGKSIVV 402
Query: 104 --PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCT-SDKTVLKYMTDCMLLREIVIEP 160
PR VAA+SVA RV+ EM V LG EVGYSIRFED T S+ T LK++TD +LLRE +++
Sbjct: 403 TQPRRVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLRETLLDD 462
Query: 161 SLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPI 220
+L+ YS +I+DEA ER+L+TD L G K L+ R DLKL+I+SAT++A+KFS +FG+AP
Sbjct: 463 TLDKYSCVIIDEAHERSLNTDILLGFFKILLARRRDLKLIITSATMNAKKFSAFFGNAPQ 522
Query: 221 FKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHV-NE-PTGDILVFLTGQDEIERAEEI 278
F IPGR +PV+ YT P DY+EAA+ A++IH+ N+ +GDIL+F+TGQ++IE +
Sbjct: 523 FTIPGRTFPVQTIYTSNPVQDYVEAAVSQAVKIHLANDCSSGDILIFMTGQEDIETTFDT 582
Query: 279 LKQR-----TRGLGT----KIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAE 329
L+++ ++ GT +I ++ I PIY+ LP +LQ KIF+ RK+++ATNIAE
Sbjct: 583 LQEKFLQVYSKKFGTANFEEINDIEILPIYSALPADLQFKIFQDLHGTKRKIIIATNIAE 642
Query: 330 TSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLY 389
TSLTI GI+YVI G++K+K YNPK G++SL++ PISKA+A+QR+G + RT PG +RLY
Sbjct: 643 TSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSGRAGRTAPGTAYRLY 702
Query: 390 TLHNYHRIWMTILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALN 449
T + + Q E+ + +L SN L+ +D L+
Sbjct: 703 TEDTFKE---DMYLQTIPEI--QRTNL-SNTLLLLKSLDVTDELSKFPFIDKPPLQTFLS 756
Query: 450 KAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAA-------MLFVGN----- 497
+L +G + P L + +I+ IA ML + +
Sbjct: 757 SLYELWFIGAIDTSGQLTP-LGLQMAKFPLQPSLSKILLIAVRNGCSDEMLTIVSMLSVP 815
Query: 498 SIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKR 557
+FYRPK++Q AD AR F + D + LL V+ WR N+S+ WC ++++Q S+ R
Sbjct: 816 QVFYRPKERQKEADIARNKFFIAK-SDHLTLLNVFEQWRANNFSSHWCNKHFVQYKSLVR 874
Query: 558 ARDIRDQL 565
ARDIRDQL
Sbjct: 875 ARDIRDQL 882
>UNIPROTKB|F1SDW0 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:CU442751
Ensembl:ENSSSCT00000008044 Uniprot:F1SDW0
Length = 719
Score = 954 (340.9 bits), Expect = 5.9e-96, P = 5.9e-96
Identities = 209/511 (40%), Positives = 318/511 (62%)
Query: 83 LAIVGETGSGKTTQIPQYLYEPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSD-K 141
LA G T G+ + Q PR VAA++VA RV++E G LGHEVGY IRF+DCT
Sbjct: 91 LAEAGWTAEGRVVGVTQ----PRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLA 146
Query: 142 TVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLI 201
T +K++TD ML+RE++++P L YS +++DEA ERTL TD GLLK + R DL+L++
Sbjct: 147 TRIKFLTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIV 206
Query: 202 SSATLDAEKFSDYFG----SAP------IFKIPGRRYPVELFYTKAPEVDYIEAAIVTAL 251
+SATLDAEKF D+F S P I + GR +PV++FY ++P DYI++ + T +
Sbjct: 207 ASATLDAEKFRDFFNQNDTSDPPRDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVM 266
Query: 252 QIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLG-TKIAE-LIICPIYANLPTELQAK 309
+IH E GDIL FLTGQ+E+E +L ++ R LG T + L + P+YA LP+ Q K
Sbjct: 267 KIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRVLPMYAGLPSFEQMK 326
Query: 310 IFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKAS 369
+FE RKV++ATN+AETS+TI GI YVI GF K+++YNP+T +E L+V P+S+AS
Sbjct: 327 VFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQAS 386
Query: 370 ANQRTGLSERTGPGKCFRLYTLHNYHRIWMTIL--CQKYN--ELIWKMLSL-FSNVLVNF 424
ANQR G + R+ GKC+RLYT + ++ + + Q+ N +I ++ +L NVL F
Sbjct: 387 ANQRAGRAGRSRSGKCYRLYTEDAFDQLPQSTVPEMQRSNLAPVILQLKALGIDNVL-RF 445
Query: 425 DFIDPPXXXXXXXXXXXXXXXGALNKAGQLTR-VGRQMAEFPIDPKLSKTIVSLDKYKCS 483
F+ PP G L+K +LT +G ++AEFP++P +K ++ + CS
Sbjct: 446 HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCS 505
Query: 484 DEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTE 543
EI++IAAM+ + N IF P +++ A F + + GD + +L VY + + N +++
Sbjct: 506 QEILSIAAMMQIQN-IFVVPSNQKSQAIRVHRKFAVEE-GDHLTMLNVYEAFIKHNKNSQ 563
Query: 544 WCRENYIQVSSMKRARDIRDQLEGLFARVEI 574
WC+E+++ + RA +R+QL+ L + ++
Sbjct: 564 WCQEHFLNYKGLVRAATVREQLKKLLVKFQV 594
Score = 410 (149.4 bits), Expect = 1.4e-36, P = 1.4e-36
Identities = 85/174 (48%), Positives = 118/174 (67%)
Query: 57 LQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------------- 103
++++R+ LP++ +L + Y + IVGETG GK+TQIPQYL E
Sbjct: 47 IEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 104 -PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSD-KTVLKYMTDCMLLREIVIEPS 161
PR VAA++VA RV++E G LGHEVGY IRF+DCT T +K++TD ML+RE++++P
Sbjct: 107 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPL 166
Query: 162 LESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYF 215
L YS +++DEA ERTL TD GLLK + R DL+L+++SATLDAEKF D+F
Sbjct: 167 LTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFF 220
>UNIPROTKB|E2RQN1 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 EMBL:AAEX03013926
Ensembl:ENSCAFT00000014378 NextBio:20859776 Uniprot:E2RQN1
Length = 698
Score = 952 (340.2 bits), Expect = 9.7e-96, P = 9.7e-96
Identities = 210/511 (41%), Positives = 317/511 (62%)
Query: 83 LAIVGETGSGKTTQIPQYLYEPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSD-K 141
LA G T G+ + Q PR VAA++VA RV++E G LGHEVGY IRF+DCT
Sbjct: 83 LAEAGWTAEGRVVGVTQ----PRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLA 138
Query: 142 TVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLI 201
T +K++TD ML+RE++++P L YS +++DEA ERTL TD GLLK + R DL+LL+
Sbjct: 139 TRIKFLTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQRKRGDLRLLV 198
Query: 202 SSATLDAEKFSDYFG----SAP------IFKIPGRRYPVELFYTKAPEVDYIEAAIVTAL 251
+SATLDAEKF D+F S P I + GR +PV++FY ++P DYI++ + T +
Sbjct: 199 ASATLDAEKFRDFFNQNETSDPTRDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVM 258
Query: 252 QIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLG-TKIAE-LIICPIYANLPTELQAK 309
+IH E GDIL FLTGQ+E+E +L ++ R LG T + L + P+YA LP+ Q K
Sbjct: 259 KIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRVLPMYAGLPSFEQMK 318
Query: 310 IFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKAS 369
+FE RKV++ATN+AETS+TI GI YVI GF K+++YNP+T +E L+V P+S+AS
Sbjct: 319 VFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTTIECLVVAPVSQAS 378
Query: 370 ANQRTGLSERTGPGKCFRLYTLHNYHRIWMTIL--CQKYN--ELIWKMLSL-FSNVLVNF 424
ANQR G + R+ GKC+RLYT + ++ + Q+ N +I ++ +L NVL F
Sbjct: 379 ANQRAGRAGRSRSGKCYRLYTEEAFDKLPQCTVPEMQRSNLAPVILQLKALGIDNVL-RF 437
Query: 425 DFIDPPXXXXXXXXXXXXXXXGALNKAGQLTR-VGRQMAEFPIDPKLSKTIVSLDKYKCS 483
F+ PP G L+K +LT +G ++AEFP++P +K ++ + CS
Sbjct: 438 HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRVAEFPLNPMFAKMLLESGNFGCS 497
Query: 484 DEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTE 543
EI++IAAM+ + N IF P +++ A F + + GD + +L VY + + N +++
Sbjct: 498 QEILSIAAMMQIQN-IFVVPGNQKSQAIRVHRKFAVEE-GDHLTMLNVYEAFIKHNKNSQ 555
Query: 544 WCRENYIQVSSMKRARDIRDQLEGLFARVEI 574
WC+E+++ + RA +R+QL+ L + ++
Sbjct: 556 WCQEHFLNYKGLIRAATVREQLKKLLVKFQV 586
Score = 413 (150.4 bits), Expect = 3.7e-37, P = 3.7e-37
Identities = 87/174 (50%), Positives = 118/174 (67%)
Query: 57 LQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------------- 103
++++R+ LP++ +L V Y + IVGETG GK+TQIPQYL E
Sbjct: 39 IEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 98
Query: 104 -PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSD-KTVLKYMTDCMLLREIVIEPS 161
PR VAA++VA RV++E G LGHEVGY IRF+DCT T +K++TD ML+RE++++P
Sbjct: 99 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPL 158
Query: 162 LESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYF 215
L YS +++DEA ERTL TD GLLK + R DL+LL++SATLDAEKF D+F
Sbjct: 159 LTKYSAIMLDEAHERTLYTDIAIGLLKKIQRKRGDLRLLVASATLDAEKFRDFF 212
>UNIPROTKB|E2RQN7 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AAEX03013926
Ensembl:ENSCAFT00000014371 Uniprot:E2RQN7
Length = 702
Score = 952 (340.2 bits), Expect = 9.7e-96, P = 9.7e-96
Identities = 210/511 (41%), Positives = 317/511 (62%)
Query: 83 LAIVGETGSGKTTQIPQYLYEPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSD-K 141
LA G T G+ + Q PR VAA++VA RV++E G LGHEVGY IRF+DCT
Sbjct: 91 LAEAGWTAEGRVVGVTQ----PRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLA 146
Query: 142 TVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLI 201
T +K++TD ML+RE++++P L YS +++DEA ERTL TD GLLK + R DL+LL+
Sbjct: 147 TRIKFLTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQRKRGDLRLLV 206
Query: 202 SSATLDAEKFSDYFG----SAP------IFKIPGRRYPVELFYTKAPEVDYIEAAIVTAL 251
+SATLDAEKF D+F S P I + GR +PV++FY ++P DYI++ + T +
Sbjct: 207 ASATLDAEKFRDFFNQNETSDPTRDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVM 266
Query: 252 QIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLG-TKIAE-LIICPIYANLPTELQAK 309
+IH E GDIL FLTGQ+E+E +L ++ R LG T + L + P+YA LP+ Q K
Sbjct: 267 KIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRVLPMYAGLPSFEQMK 326
Query: 310 IFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKAS 369
+FE RKV++ATN+AETS+TI GI YVI GF K+++YNP+T +E L+V P+S+AS
Sbjct: 327 VFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTTIECLVVAPVSQAS 386
Query: 370 ANQRTGLSERTGPGKCFRLYTLHNYHRIWMTIL--CQKYN--ELIWKMLSL-FSNVLVNF 424
ANQR G + R+ GKC+RLYT + ++ + Q+ N +I ++ +L NVL F
Sbjct: 387 ANQRAGRAGRSRSGKCYRLYTEEAFDKLPQCTVPEMQRSNLAPVILQLKALGIDNVL-RF 445
Query: 425 DFIDPPXXXXXXXXXXXXXXXGALNKAGQLTR-VGRQMAEFPIDPKLSKTIVSLDKYKCS 483
F+ PP G L+K +LT +G ++AEFP++P +K ++ + CS
Sbjct: 446 HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRVAEFPLNPMFAKMLLESGNFGCS 505
Query: 484 DEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTE 543
EI++IAAM+ + N IF P +++ A F + + GD + +L VY + + N +++
Sbjct: 506 QEILSIAAMMQIQN-IFVVPGNQKSQAIRVHRKFAVEE-GDHLTMLNVYEAFIKHNKNSQ 563
Query: 544 WCRENYIQVSSMKRARDIRDQLEGLFARVEI 574
WC+E+++ + RA +R+QL+ L + ++
Sbjct: 564 WCQEHFLNYKGLIRAATVREQLKKLLVKFQV 594
Score = 413 (150.4 bits), Expect = 3.8e-37, P = 3.8e-37
Identities = 87/174 (50%), Positives = 118/174 (67%)
Query: 57 LQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------------- 103
++++R+ LP++ +L V Y + IVGETG GK+TQIPQYL E
Sbjct: 47 IEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 104 -PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSD-KTVLKYMTDCMLLREIVIEPS 161
PR VAA++VA RV++E G LGHEVGY IRF+DCT T +K++TD ML+RE++++P
Sbjct: 107 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPL 166
Query: 162 LESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYF 215
L YS +++DEA ERTL TD GLLK + R DL+LL++SATLDAEKF D+F
Sbjct: 167 LTKYSAIMLDEAHERTLYTDIAIGLLKKIQRKRGDLRLLVASATLDAEKFRDFF 220
>UNIPROTKB|Q5THR1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
EMBL:AL023803 UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI00642913
SMR:Q5THR1 Ensembl:ENST00000373325 Uniprot:Q5THR1
Length = 679
Score = 950 (339.5 bits), Expect = 1.6e-95, P = 1.6e-95
Identities = 207/512 (40%), Positives = 317/512 (61%)
Query: 83 LAIVGETGSGKTTQIPQYLYEPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSD-K 141
LA G T G+ + Q PR VAA++VA RV++E G LGHEVGY IRF+DCT
Sbjct: 91 LAEAGWTAEGRVVGVTQ----PRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLA 146
Query: 142 TVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLI 201
T +K++TD ML+RE++++P L YSV+++DEA ERTL TD GLLK + R DL+L++
Sbjct: 147 TRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIV 206
Query: 202 SSATLDAEKFSDYFG----SAP------IFKIPGRRYPVELFYTKAPEVDYIEAAIVTAL 251
+SATLDA+KF D+F S P I + GR +PV++FY ++P DYI++ + T +
Sbjct: 207 ASATLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVV 266
Query: 252 QIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGL---GTKIAELIICPIYANLPTELQA 308
+IH E GD+L FLTGQ+E+E +L ++ R L G K L + P+YA LP+ Q
Sbjct: 267 KIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMK-RHLRVLPMYAGLPSFEQM 325
Query: 309 KIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKA 368
K+FE RKV++ATN+AETS+TI GI YVI GF K+++YNP+T +E L+V P+S+A
Sbjct: 326 KVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQA 385
Query: 369 SANQRTGLSERTGPGKCFRLYTLHNYHRIWMTIL--CQKYN--ELIWKMLSL-FSNVLVN 423
SANQR G R+ GKC+RLYT + ++ + + Q+ N +I ++ +L NVL
Sbjct: 386 SANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKALGIDNVL-R 444
Query: 424 FDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTR-VGRQMAEFPIDPKLSKTIVSLDKYKC 482
F F+ PP G L+K +LT +G ++AEFP++P +K ++ + C
Sbjct: 445 FHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGC 504
Query: 483 SDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYST 542
S EI++IAAM+ + N IF P +++ +A F + + GD + +L +Y + + N +
Sbjct: 505 SQEILSIAAMMQIQN-IFVVPPNQKSHAIRVHRKFAVEE-GDHLTMLNIYEAFIKHNKDS 562
Query: 543 EWCRENYIQVSSMKRARDIRDQLEGLFARVEI 574
+WC+E+++ + RA +R+QL+ L + ++
Sbjct: 563 KWCQEHFLNYKGLVRAATVREQLKKLLVKFQV 594
Score = 412 (150.1 bits), Expect = 4.7e-37, P = 4.7e-37
Identities = 85/174 (48%), Positives = 119/174 (68%)
Query: 57 LQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------------- 103
++++R+ LP++ +L + Y + IVGETG GK+TQIPQYL E
Sbjct: 47 IEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 104 -PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSD-KTVLKYMTDCMLLREIVIEPS 161
PR VAA++VA RV++E G LGHEVGY IRF+DCT T +K++TD ML+RE++++P
Sbjct: 107 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPL 166
Query: 162 LESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYF 215
L YSV+++DEA ERTL TD GLLK + R DL+L+++SATLDA+KF D+F
Sbjct: 167 LTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFF 220
>UNIPROTKB|Q9H5Z1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CH471077 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K13117 OMA:NIFVVPP
EMBL:AK026412 EMBL:AK025541 EMBL:AL023803 EMBL:BC132669
IPI:IPI00030288 RefSeq:NP_068750.2 UniGene:Hs.444520
ProteinModelPortal:Q9H5Z1 SMR:Q9H5Z1 IntAct:Q9H5Z1
PhosphoSite:Q9H5Z1 DMDM:20137971 PRIDE:Q9H5Z1 DNASU:60625
Ensembl:ENST00000252011 GeneID:60625 KEGG:hsa:60625 UCSC:uc002xjh.3
CTD:60625 GeneCards:GC20P037590 HGNC:HGNC:15861 neXtProt:NX_Q9H5Z1
PharmGKB:PA27222 InParanoid:Q9H5Z1 PhylomeDB:Q9H5Z1
GenomeRNAi:60625 NextBio:65461 ArrayExpress:Q9H5Z1 Bgee:Q9H5Z1
CleanEx:HS_DHX35 Genevestigator:Q9H5Z1 GermOnline:ENSG00000101452
Uniprot:Q9H5Z1
Length = 703
Score = 950 (339.5 bits), Expect = 1.6e-95, P = 1.6e-95
Identities = 207/512 (40%), Positives = 317/512 (61%)
Query: 83 LAIVGETGSGKTTQIPQYLYEPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSD-K 141
LA G T G+ + Q PR VAA++VA RV++E G LGHEVGY IRF+DCT
Sbjct: 91 LAEAGWTAEGRVVGVTQ----PRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLA 146
Query: 142 TVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLI 201
T +K++TD ML+RE++++P L YSV+++DEA ERTL TD GLLK + R DL+L++
Sbjct: 147 TRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIV 206
Query: 202 SSATLDAEKFSDYFG----SAP------IFKIPGRRYPVELFYTKAPEVDYIEAAIVTAL 251
+SATLDA+KF D+F S P I + GR +PV++FY ++P DYI++ + T +
Sbjct: 207 ASATLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVV 266
Query: 252 QIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGL---GTKIAELIICPIYANLPTELQA 308
+IH E GD+L FLTGQ+E+E +L ++ R L G K L + P+YA LP+ Q
Sbjct: 267 KIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMK-RHLRVLPMYAGLPSFEQM 325
Query: 309 KIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKA 368
K+FE RKV++ATN+AETS+TI GI YVI GF K+++YNP+T +E L+V P+S+A
Sbjct: 326 KVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQA 385
Query: 369 SANQRTGLSERTGPGKCFRLYTLHNYHRIWMTIL--CQKYN--ELIWKMLSL-FSNVLVN 423
SANQR G R+ GKC+RLYT + ++ + + Q+ N +I ++ +L NVL
Sbjct: 386 SANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKALGIDNVL-R 444
Query: 424 FDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTR-VGRQMAEFPIDPKLSKTIVSLDKYKC 482
F F+ PP G L+K +LT +G ++AEFP++P +K ++ + C
Sbjct: 445 FHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGC 504
Query: 483 SDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYST 542
S EI++IAAM+ + N IF P +++ +A F + + GD + +L +Y + + N +
Sbjct: 505 SQEILSIAAMMQIQN-IFVVPPNQKSHAIRVHRKFAVEE-GDHLTMLNIYEAFIKHNKDS 562
Query: 543 EWCRENYIQVSSMKRARDIRDQLEGLFARVEI 574
+WC+E+++ + RA +R+QL+ L + ++
Sbjct: 563 KWCQEHFLNYKGLVRAATVREQLKKLLVKFQV 594
Score = 412 (150.1 bits), Expect = 5.6e-37, P = 5.6e-37
Identities = 85/174 (48%), Positives = 119/174 (68%)
Query: 57 LQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------------- 103
++++R+ LP++ +L + Y + IVGETG GK+TQIPQYL E
Sbjct: 47 IEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 104 -PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSD-KTVLKYMTDCMLLREIVIEPS 161
PR VAA++VA RV++E G LGHEVGY IRF+DCT T +K++TD ML+RE++++P
Sbjct: 107 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPL 166
Query: 162 LESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYF 215
L YSV+++DEA ERTL TD GLLK + R DL+L+++SATLDA+KF D+F
Sbjct: 167 LTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFF 220
>ASPGD|ASPL0000052850 [details] [associations]
symbol:AN1363 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K13117
EMBL:AACD01000018 OrthoDB:EOG4BGD47 RefSeq:XP_658967.1
EnsemblFungi:CADANIAT00001248 GeneID:2877144 KEGG:ani:AN1363.2
OMA:VAEEMRC Uniprot:Q5BDL7
Length = 670
Score = 946 (338.1 bits), Expect = 4.2e-95, P = 4.2e-95
Identities = 205/502 (40%), Positives = 312/502 (62%)
Query: 103 EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
+PR VAA +VAARV++EM KLG +VGYSIRFED TS T +K++TD MLLRE +++P L
Sbjct: 75 QPRRVAATTVAARVAEEMRCKLGEDVGYSIRFEDRTSAMTRIKFLTDGMLLREALVDPLL 134
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGS----- 217
YSV++VDEA ER+LSTD L G+LK ++ RP+L++++SSATL AE F YF
Sbjct: 135 SRYSVIMVDEAHERSLSTDILLGILKKILKRRPELRIIVSSATLQAEDFLRYFAGDESQQ 194
Query: 218 AP----------IFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLT 267
P I I GR YPV+ + ++ +Y+E ++ T IH+ E GDIL+FLT
Sbjct: 195 GPNGEVGGNTGKIISIEGRMYPVDTLFLESAAENYVERSVKTVFDIHLQEGEGDILIFLT 254
Query: 268 GQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNI 327
G++EIE A +++ +R L K L+ P+YA L T+ Q +FEP PE RKVV++TNI
Sbjct: 255 GREEIETAIQLISERATTLHPKSQSLLPLPLYAGLTTDQQMYVFEPAPENTRKVVVSTNI 314
Query: 328 AETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFR 387
AE S+TI+GI YV+ GFAK+++Y+P TG+E+L PISKA+A QR G + RT PGKCFR
Sbjct: 315 AEASVTINGIVYVVDCGFAKLRAYDPSTGIETLTAVPISKAAAVQRAGRAGRTKPGKCFR 374
Query: 388 LYTLHNYHRIWMTIL--CQKYN--ELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXX 443
LYT H Y ++ + Q+ N +I ++ +L + +V FDF+ P
Sbjct: 375 LYTQHAYEQLPDATIPEIQRSNLAPVIMQLKALGIDNIVRFDFLTSPPADLVIRAFELLY 434
Query: 444 XXGALNKAGQLTR-VGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYR 502
GA++ +LT+ +G +MAE +DP ++K ++S + C EI+TIAAM+ + +++ +
Sbjct: 435 SLGAIDDYAKLTKPLGMRMAELAVDPMMAKVLLSAQSFGCLSEILTIAAMVSLQGAVWVQ 494
Query: 503 PKDKQIYADNARMNFHLGDVGDRIALLRVYNCW-RECNYSTEWCRENYIQVSSMKRARDI 561
+ ++++R F + + GD + L VY + + ++WCR+N + S+ RA +
Sbjct: 495 HDGDKKSSESSRRKFAVEE-GDHLTYLNVYQAFVTKGKKESKWCRDNLLNYRSLLRAVSV 553
Query: 562 RDQLEGLFAR--VEIDTSIYSN 581
R QL+ R +++D + S+
Sbjct: 554 RAQLKRYLERFGIQVDETFPSH 575
Score = 414 (150.8 bits), Expect = 1.6e-37, P = 1.6e-37
Identities = 91/178 (51%), Positives = 120/178 (67%)
Query: 52 STLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYL---------- 101
S + L + LPI + +L V YPV +VG+TGSGKTTQ+PQYL
Sbjct: 10 SFIPSLYKPASLLPIARHKQSILYLVETYPVTIVVGQTGSGKTTQLPQYLDQAGWCTEGK 69
Query: 102 ----YEPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIV 157
+PR VAA +VAARV++EM KLG +VGYSIRFED TS T +K++TD MLLRE +
Sbjct: 70 AIAVTQPRRVAATTVAARVAEEMRCKLGEDVGYSIRFEDRTSAMTRIKFLTDGMLLREAL 129
Query: 158 IEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYF 215
++P L YSV++VDEA ER+LSTD L G+LK ++ RP+L++++SSATL AE F YF
Sbjct: 130 VDPLLSRYSVIMVDEAHERSLSTDILLGILKKILKRRPELRIIVSSATLQAEDFLRYF 187
>UNIPROTKB|E1C4U5 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AADN02019394
IPI:IPI00591771 Ensembl:ENSGALT00000005796 Uniprot:E1C4U5
Length = 705
Score = 945 (337.7 bits), Expect = 5.3e-95, P = 5.3e-95
Identities = 212/507 (41%), Positives = 315/507 (62%)
Query: 83 LAIVGETGSGKTTQIPQYLYEPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDK- 141
LA G T G+ + Q PR VAA+SVA RV+ E G LGHEVGY IRF+DCT +
Sbjct: 91 LAEAGWTAEGRVVGVTQ----PRRVAAVSVAGRVADERGAVLGHEVGYCIRFDDCTDPQA 146
Query: 142 TVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLI 201
T +K++TD ML+RE++ +P L YSVL++DEA ERTL TD GLLK + R DL+L++
Sbjct: 147 TRIKFLTDGMLVREMMADPLLTRYSVLMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIV 206
Query: 202 SSATLDAEKFSDYFG----------SAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTAL 251
+SATLDAEKF D+F ++ I + GR +PV++FY ++P DYI++ + TA+
Sbjct: 207 ASATLDAEKFRDFFNQNDTGDPSKDTSVILTVEGRTFPVDIFYIQSPVPDYIKSTVETAM 266
Query: 252 QIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLG-TKIAE-LIICPIYANLPTELQAK 309
+IH E GDIL FLTGQ+E+E +L ++ R L T + + L + P+YA LP+ Q K
Sbjct: 267 KIHQMENDGDILAFLTGQEEVETVVSMLIEQARALSRTGMRKHLRVLPMYAGLPSPDQMK 326
Query: 310 IFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKAS 369
+FE RKV++ATN+AETS+TI GI YVI GF K+++YNPKT +E L+V P+SKAS
Sbjct: 327 VFERVSRSVRKVIVATNVAETSITIHGIAYVIDCGFVKLRAYNPKTAIECLVVVPVSKAS 386
Query: 370 ANQRTGLSERTGPGKCFRLYTL--HNYHRIWMTIL--CQKYN--ELIWKMLSL-FSNVLV 422
ANQR G + R GKC+RLYT ++ ++ + + Q+ N +I ++ +L NVL
Sbjct: 387 ANQRAGRAGRNRSGKCYRLYTATEEDFEKLPQSTVPEMQRSNLAPVILQLKALGIDNVL- 445
Query: 423 NFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTR-VGRQMAEFPIDPKLSKTIVSLDKYK 481
F F+ PP G L+ +LT +G ++AEFP++P +K ++ +
Sbjct: 446 RFPFLSPPPAQSMVQALELLYALGGLDMHCRLTEPLGMRIAEFPLNPMFAKMLLESGNFG 505
Query: 482 CSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYS 541
CS EI+TIAAM+ + N IF P +++ A F + + GD + +L VY + + + S
Sbjct: 506 CSQEILTIAAMMQIQN-IFLIPPNQKSQAARQHRKFAVEE-GDHLTMLNVYEAFVKHSKS 563
Query: 542 TEWCRENYIQVSSMKRARDIRDQLEGL 568
++WC+E+++ + RA +R+QL+ L
Sbjct: 564 SQWCQEHFLNYKGLVRASVVREQLKKL 590
Score = 418 (152.2 bits), Expect = 1.5e-38, P = 1.5e-38
Identities = 90/174 (51%), Positives = 118/174 (67%)
Query: 57 LQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------------- 103
++++R+ LP++ +L V Y L IVGETG GK+TQIPQYL E
Sbjct: 47 IEQQRQKLPVFKLRNHILYLVESYQTLVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 104 -PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDK-TVLKYMTDCMLLREIVIEPS 161
PR VAA+SVA RV+ E G LGHEVGY IRF+DCT + T +K++TD ML+RE++ +P
Sbjct: 107 QPRRVAAVSVAGRVADERGAVLGHEVGYCIRFDDCTDPQATRIKFLTDGMLVREMMADPL 166
Query: 162 LESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYF 215
L YSVL++DEA ERTL TD GLLK + R DL+L+++SATLDAEKF D+F
Sbjct: 167 LTRYSVLMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFF 220
>UNIPROTKB|F1MWZ4 [details] [associations]
symbol:F1MWZ4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000182
"rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:DAAA02048722
IPI:IPI00693412 Ensembl:ENSBTAT00000016932 Uniprot:F1MWZ4
Length = 714
Score = 944 (337.4 bits), Expect = 6.8e-95, P = 6.8e-95
Identities = 205/501 (40%), Positives = 306/501 (61%)
Query: 88 ETGSGKTTQIPQYLYEPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYM 147
E G G+ I + +PR VAA+S+A RVS E +LG VGY++RF+D TSD T +K++
Sbjct: 120 EGGIGRQAIIA--VTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSDDTKIKFL 177
Query: 148 TDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDL-----KLLIS 202
TD MLLRE + + L YS +I+DEA ERTL TD LFG++K R +L K+L+
Sbjct: 178 TDGMLLREAISDCLLRKYSCIILDEAHERTLHTDVLFGVVKAAQKRRKELGKLPLKVLVM 237
Query: 203 SATLDAEKFSDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTG-D 261
SAT+D + FS YF AP+ + GR++P+++FYTK P+ DY+ AA+V+ QIH P+ D
Sbjct: 238 SATMDVDLFSQYFNGAPVLYLEGRQHPIQIFYTKQPQHDYLHAALVSVFQIHQEAPSSHD 297
Query: 262 ILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKV 321
ILVFLTGQ+EIE + + + L +++ P+YA+LP Q ++F+ P+ RKV
Sbjct: 298 ILVFLTGQEEIEAMSKTCRDIAKHLPDGCPSMLVLPLYASLPYAQQLRVFQRAPKGYRKV 357
Query: 322 VLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTG 381
+++TNIAETS+TI GIKYV+ G K K YNP +G+E L V +SK A QRTG + R
Sbjct: 358 IISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGRED 417
Query: 382 PGKCFRLYTLHNYHRIW-MTIL-CQKYN--ELIWKMLSL-FSNVLVNFDFIDPPXXXXXX 436
G C+RLYT + + MT+ Q+ N ++ ++L++ NVL FDF+ P
Sbjct: 418 SGICYRLYTEDEFEKFEKMTVPEIQRCNLASVMLQLLAMKIPNVLT-FDFMSKPSPDHIQ 476
Query: 437 XXXXXXXXXGAL-NKAGQLTR--VGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAML 493
GAL ++ GQLT +GR+MA FP++PK +KTI+ K+ C++EI+TI A+L
Sbjct: 477 AAIAQLELLGALEHRDGQLTLTPMGRKMAAFPLEPKFAKTILLSPKFHCTEEILTIVALL 536
Query: 494 FVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVS 553
V +SI Y P ++ + R F + GD + LL VY ++ + EWC+EN++
Sbjct: 537 SV-DSILYNPPSRRDEVQSVRKKF-VSSEGDHLTLLNVYRTFKNTGGNKEWCKENFVNSK 594
Query: 554 SMKRARDIRDQLEGLFARVEI 574
+M ++R QL + ++ +
Sbjct: 595 NMMLVAEVRAQLRDICIKMSM 615
Score = 336 (123.3 bits), Expect = 1.6e-27, P = 1.6e-27
Identities = 79/175 (45%), Positives = 107/175 (61%)
Query: 55 EMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE----------- 103
E ++++R+ LPI+ +LL + ++GETGSGKTTQIPQYLYE
Sbjct: 72 EAVEQQRRNLPIFQARGQLLAQLRNLDSAVLIGETGSGKTTQIPQYLYEGGIGRQAIIAV 131
Query: 104 --PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPS 161
PR VAA+S+A RVS E +LG VGY++RF+D TSD T +K++TD MLLRE + +
Sbjct: 132 TQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSDDTKIKFLTDGMLLREAISDCL 191
Query: 162 LESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDL-KLLISSATLDAEKFSDYF 215
L YS +I+DEA ERTL TD LFG++K R +L KL + + A D F
Sbjct: 192 LRKYSCIILDEAHERTLHTDVLFGVVKAAQKRRKELGKLPLKVLVMSATMDVDLF 246
>UNIPROTKB|B0V0F8 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR011545
Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOVERGEN:HBG039428 HGNC:HGNC:2739 OrthoDB:EOG4VHK5Q EMBL:CR759873
IPI:IPI00894081 SMR:B0V0F8 Ensembl:ENST00000450902 Uniprot:B0V0F8
Length = 669
Score = 942 (336.7 bits), Expect = 1.1e-94, P = 1.1e-94
Identities = 189/330 (57%), Positives = 246/330 (74%)
Query: 5 DAWEKQQREKCTFEIEDKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTL 64
DA ++ + + E E++ ++F + GD E P S E +Q R++L
Sbjct: 345 DAASQEPKYQLVLE-EEETIEFVRATQLQGDE----EPSAPPTSTQAQQKESIQAVRRSL 399
Query: 65 PIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE--------------PRWVAAM 110
P++PF EELL A++ + VL I GETGSGKTTQIPQYL+E PR VAAM
Sbjct: 400 PVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRRVAAM 459
Query: 111 SVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIV 170
SVAARV++EMGVKLG+EVGYSIRFEDCTS++TVL+YMTD MLLRE + EP L SYSV++V
Sbjct: 460 SVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMV 519
Query: 171 DEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPV 230
DEA ERTL TD LFGL+KD+ +RP+LK+L++SAT+D +FS +F AP+F+IPGRR+PV
Sbjct: 520 DEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPV 579
Query: 231 ELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKI 290
++FYTKAPE DY+EA +V+ LQIHV +P GDILVFLTGQ+EIE A E+L+ R R LG+KI
Sbjct: 580 DIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKI 639
Query: 291 AELIICPIYANLPTELQAKIFEPTPERARK 320
EL++ PIYANLP+++QA+IF+PTP ARK
Sbjct: 640 RELLVLPIYANLPSDMQARIFQPTPPGARK 669
>CGD|CAL0002969 [details] [associations]
symbol:orf19.107 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0002969 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14781 EMBL:AACQ01000106 RefSeq:XP_714316.1
GeneID:3644014 KEGG:cal:CaO19.107 Uniprot:Q59XP9
Length = 831
Score = 936 (334.5 bits), Expect = 4.8e-94, P = 4.8e-94
Identities = 222/594 (37%), Positives = 339/594 (57%)
Query: 8 EKQQREKCTF----EIEDKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKT 63
EK Q K F E + K V + + D + + + N + +T + L + R+
Sbjct: 122 EKHQHSKNKFKQKLEFKRKTVVYKDQDDEDDEEENNTFNFSQNSFQLAATAQQLLQIREK 181
Query: 64 LPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLY----------EPRWVAAMSVA 113
LPIY +++++ ++ V ++GETGSGK+TQIPQ+L +PR VAA S+A
Sbjct: 182 LPIYHHKDKIIEYINNNQVTIVIGETGSGKSTQIPQFLMPENPKMIGVTQPRRVAAASLA 241
Query: 114 ARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEA 173
ARVS+E G KLG +VGY +RF + T+ +T LKY+TD MLLREI+++ +L YS +I+DEA
Sbjct: 242 ARVSEEYGCKLGQDVGYQVRFTNMTNRQTKLKYLTDGMLLREIMLDSNLTKYSTIILDEA 301
Query: 174 QERTLSTDNLFGLLKDLINY--RPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVE 231
ERT+ TD + G LK +I R DLK+++ SATL+AE FS++FG+API I G+ YPV
Sbjct: 302 HERTILTDLIMGFLKQIITSGKRKDLKIVVMSATLNAELFSNFFGNAPILYIEGKMYPVS 361
Query: 232 LFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIA 291
FY A D ++ I + +QI++NEP GD+L FL GQ+EI+ + L+Q L +
Sbjct: 362 QFYLDAESEDIVDTMIRSIIQINLNEPEGDVLCFLPGQEEIDNCVKSLEQLAPQLPREAP 421
Query: 292 ELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSY 351
++ P+YA L Q+KIFE P+ RKV+LATNIAETS+T+ G+KYVI G K+K +
Sbjct: 422 LIVPLPLYAALSPGQQSKIFEKLPKGRRKVILATNIAETSITVSGVKYVIDSGLRKIKVW 481
Query: 352 NPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIWMTILCQ-KYNELI 410
G+ +LL PIS+ASA QR G + R GK FRLY Y + + K N++I
Sbjct: 482 KHNLGLSTLLTTPISQASARQRAGRAGRESEGKVFRLYPESTYMALPKQQESEIKRNDII 541
Query: 411 WKMLSLFS---NVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPID 467
+L+L + L+N+ +++ P GALN +G++T +G +M+ P+
Sbjct: 542 LPVLTLKKLGVDDLLNWSWLEYPGQDAILSALNTLYTLGALNDSGKVTTLGYKMSILPLP 601
Query: 468 PKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYAD-NARMNFHLGDV-GDR 525
P+LS +++ ++ +I IA+ L V N I + + + R + LG++ GD
Sbjct: 602 PQLSVVLITAAEFGVLSPVIDIASCLSVDNLITNVTGEARDEINFKRRQHCPLGNIHGDL 661
Query: 526 IALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQL-EGLFARVEIDTSI 578
IAL + ++ EWC+E K I+ QL E + ++ D S+
Sbjct: 662 IALYEYFQAYQA--QGKEWCKELAFSFKGFKNVEKIKYQLQEYMMTTIKQDDSL 713
>MGI|MGI:2445102 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000182 "rDNA binding" evidence=ISO;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=ISO;IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2445102
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0000182
GO:GO:0045943 HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241
CTD:56919 OMA:APDYFRR ChiTaRS:DHX33 EMBL:AK035177 EMBL:BC052172
IPI:IPI00410764 RefSeq:NP_848144.3 UniGene:Mm.35399
ProteinModelPortal:Q80VY9 SMR:Q80VY9 PhosphoSite:Q80VY9
PRIDE:Q80VY9 Ensembl:ENSMUST00000108527 GeneID:216877
KEGG:mmu:216877 InParanoid:Q80VY9 NextBio:375442 Bgee:Q80VY9
CleanEx:MM_DHX33 Genevestigator:Q80VY9
GermOnline:ENSMUSG00000040620 Uniprot:Q80VY9
Length = 698
Score = 930 (332.4 bits), Expect = 2.1e-93, P = 2.1e-93
Identities = 197/486 (40%), Positives = 298/486 (61%)
Query: 103 EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
+PR VAA+S+A RVS E +LG VGY++RFED TS+ T +K++TD MLLRE + + L
Sbjct: 117 QPRRVAAISLATRVSDEKRTELGKLVGYTVRFEDVTSEDTRIKFLTDGMLLREAISDSLL 176
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDL-----KLLISSATLDAEKFSDYFGS 217
YS +I+DEA ERT+ TD LFG++K R +L K+++ SAT+D + FS YF
Sbjct: 177 RKYSCVILDEAHERTIHTDVLFGVVKTAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNR 236
Query: 218 APIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTG-DILVFLTGQDEIERAE 276
AP+ + GR++P+++FYTK P+ DY+ AA+V+ QIH P DILVFLTGQ+EIE
Sbjct: 237 APVLYLEGRQHPIQIFYTKQPQQDYLHAALVSVFQIHQEAPASQDILVFLTGQEEIEAMS 296
Query: 277 EILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDG 336
+ + R L +++ P+YA+LP Q ++F+ P+ RKV+++TNIAETS+TI G
Sbjct: 297 KTCRDIARHLPDGCPSMLVLPLYASLPYSQQLRVFQGAPKGYRKVIISTNIAETSITITG 356
Query: 337 IKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHR 396
IKYV+ G K K YNP +G+E L V +SK A QRTG + R G C+RLYT + +
Sbjct: 357 IKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEK 416
Query: 397 IW-MTIL-CQKYN--ELIWKMLSL-FSNVLVNFDFIDPPXXXXXXXXXXXXXXXGAL-NK 450
MT+ Q+ N +I ++L++ NVL FDF+ P GAL +K
Sbjct: 417 FEKMTVPEIQRCNLASVILQLLAMKVPNVLT-FDFMSKPSPDHIEAAIAQLDLLGALEHK 475
Query: 451 AGQLTR--VGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQI 508
QLT +GR+MA FP++P+ +KTI+ K+ C++EI+TI ++L V +S+ Y P ++
Sbjct: 476 DDQLTLTPIGRKMAAFPLEPRFAKTILLSSKFHCTEEILTIVSLLSV-DSVLYNPPARRD 534
Query: 509 YADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGL 568
+ R F + GD I LL +Y ++ + +WC+EN++ +M ++R QL +
Sbjct: 535 EVQSVRKKF-ISSEGDHITLLNIYRTFKNIGGNKDWCKENFVNSKNMLLVAEVRAQLREI 593
Query: 569 FARVEI 574
++ +
Sbjct: 594 CLKMSM 599
Score = 332 (121.9 bits), Expect = 4.2e-27, P = 4.2e-27
Identities = 81/185 (43%), Positives = 111/185 (60%)
Query: 45 PNKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE- 103
P+ S + LE+ +R++LPI+ +LL + ++GETGSGKTTQIPQYLYE
Sbjct: 49 PSASPYREALEL---QRRSLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEG 105
Query: 104 ------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCM 151
PR VAA+S+A RVS E +LG VGY++RFED TS+ T +K++TD M
Sbjct: 106 GISRQGIIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFEDVTSEDTRIKFLTDGM 165
Query: 152 LLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDL-KLLISSATLDAEK 210
LLRE + + L YS +I+DEA ERT+ TD LFG++K R +L KL + + A
Sbjct: 166 LLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKTAQKRRKELGKLPLKVIVMSATM 225
Query: 211 FSDYF 215
D F
Sbjct: 226 DVDLF 230
>WB|WBGene00022056 [details] [associations]
symbol:Y67D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO081642 RefSeq:NP_497420.1
ProteinModelPortal:Q9BKQ8 SMR:Q9BKQ8 MINT:MINT-1068531
STRING:Q9BKQ8 PaxDb:Q9BKQ8 EnsemblMetazoa:Y67D2.6 GeneID:175308
KEGG:cel:CELE_Y67D2.6 UCSC:Y67D2.6 CTD:175308 WormBase:Y67D2.6
InParanoid:Q9BKQ8 KO:K13117 OMA:NIFVVPP NextBio:887600
Uniprot:Q9BKQ8
Length = 732
Score = 925 (330.7 bits), Expect = 7.0e-93, P = 7.0e-93
Identities = 215/550 (39%), Positives = 319/550 (58%)
Query: 57 LQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------------- 103
+Q++R LPI+ +L Y + IVGETG GK+TQ+PQ+L E
Sbjct: 70 IQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGRQIVIT 129
Query: 104 -PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
PR VA +++A RV++E LGH+VGY++RF+D + T +K+MTD +LLREI+ +P L
Sbjct: 130 QPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLLREILADPLL 189
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYF-----GS 217
YS++++DEA ER+ +TD L GLL+ +I R DL++++SSATLDAE F D+F G+
Sbjct: 190 SKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATLDAELFKDFFEMNETGN 249
Query: 218 -----APIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEI 272
A I + GR +PV + +TK DY ++A+ T + IH +E GDILVFLTGQDE+
Sbjct: 250 SDKDTAGIISVEGRTHPVAVHHTKTSVPDYCQSAVDTVINIHKHENPGDILVFLTGQDEV 309
Query: 273 ERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSL 332
E E L++ L L + P Y LP Q K F+ TP RKVV+ATNIAE S+
Sbjct: 310 EDVCEKLRELAGNL-KNCDRLWVVPCYGALPAREQMKAFDSTPHGTRKVVVATNIAEASI 368
Query: 333 TIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLH 392
TI GI YVI G+ K+++ + G+E+L+ +SKASA QR G + R PGKC+RLY
Sbjct: 369 TIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRIRPGKCYRLYPES 428
Query: 393 NYHRIWM-TI----LCQKYNELIW-KMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXG 446
+ R T+ CQ + ++ K L + NV F ++ PP G
Sbjct: 429 EFERFAEGTVPEIQRCQMASTILQLKALGV-QNVH-RFHYLSPPPSWAMINGLELLYALG 486
Query: 447 ALNKAGQLTR-VGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKD 505
A+++ QLT +G QMAEFP+ P SK ++ ++ CS E++TI AM+ + +F P
Sbjct: 487 AIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQI-QDVFITPYR 545
Query: 506 KQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQL 565
++ AD R F + + GD + +L V+ + E S +WC ++++ + RA ++R QL
Sbjct: 546 QRHQADVIRKKFAVEE-GDHMTMLNVFTKFVENGRSKKWCSDHFVNYRGLMRADNVRSQL 604
Query: 566 EGLFARVEID 575
L R EI+
Sbjct: 605 VRLLKRFEIE 614
>UNIPROTKB|F1PRA1 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000182 "rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AAEX03003580
Ensembl:ENSCAFT00000024626 Uniprot:F1PRA1
Length = 616
Score = 922 (329.6 bits), Expect = 1.5e-92, P = 1.5e-92
Identities = 200/501 (39%), Positives = 302/501 (60%)
Query: 88 ETGSGKTTQIPQYLYEPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYM 147
E G G+ I + +PR VAA+S+A RVS E +LG VGY++RF+D +S+ T +K++
Sbjct: 22 EGGIGRQGVIA--VTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVSSEDTRIKFL 79
Query: 148 TDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDL-----KLLIS 202
TD MLLRE + + L YS +I+DEA ERT+ TD LFG++K R +L K+++
Sbjct: 80 TDGMLLREAISDSLLRKYSCIILDEAHERTVHTDVLFGVVKAAQRRRKELRKLPLKVIVM 139
Query: 203 SATLDAEKFSDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTG-D 261
SAT+D + FS YF A + + GR++P+++FYTK P+ DY+ AA+V+ QIH P+ D
Sbjct: 140 SATMDVDLFSQYFNGASVLYLEGRQHPIQVFYTKQPQQDYLHAALVSVFQIHQEAPSSQD 199
Query: 262 ILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKV 321
ILVFLTGQ+EIE + + + L +++ P+YA+LP Q ++F+ P+ RKV
Sbjct: 200 ILVFLTGQEEIEAVSKTCRDIAKHLPDGCPSMLVLPLYASLPYAQQLRVFQGAPKGCRKV 259
Query: 322 VLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTG 381
++ATNIAETS+TI GIKYV+ G K K YNP +G+E L V +SK A QR G + R
Sbjct: 260 IIATNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRAGRAGRED 319
Query: 382 PGKCFRLYTLHNYHRIW-MTIL-CQKYN--ELIWKMLSL-FSNVLVNFDFIDPPXXXXXX 436
G C+RLYT + + + MT+ Q+ N ++ ++L++ NVL FDF+ P
Sbjct: 320 SGICYRLYTENEFEKFEKMTVPEIQRCNLASVLLQLLAMKVPNVLT-FDFMSKPSPDHMQ 378
Query: 437 XXXXXXXXXGALN-KAGQLTR--VGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAML 493
GAL K QLT +GR+MA FP++PK +KTI+ K+ C++EI+TI ++L
Sbjct: 379 AAVAQLDLLGALERKDNQLTLTPIGRKMAAFPLEPKFAKTILLSPKFHCTEEILTIVSLL 438
Query: 494 FVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVS 553
V +S+ Y P ++ R F L GD I LL +Y ++ +WCREN++
Sbjct: 439 SV-DSVLYNPPSRRDEVQAMRKKF-LSSEGDHITLLNIYRTFKSLGGDKDWCRENFVNSR 496
Query: 554 SMKRARDIRDQLEGLFARVEI 574
+M A ++R QL + ++ +
Sbjct: 497 NMMLAAEVRAQLRDICLKMSM 517
Score = 288 (106.4 bits), Expect = 2.7e-22, P = 2.7e-22
Identities = 68/143 (47%), Positives = 90/143 (62%)
Query: 87 GETGSGKTTQIPQYLYE-------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIR 133
GETGSGKTTQ+PQYLYE PR VAA+S+A RVS E +LG VGY++R
Sbjct: 6 GETGSGKTTQLPQYLYEGGIGRQGVIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVR 65
Query: 134 FEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINY 193
F+D +S+ T +K++TD MLLRE + + L YS +I+DEA ERT+ TD LFG++K
Sbjct: 66 FDDVSSEDTRIKFLTDGMLLREAISDSLLRKYSCIILDEAHERTVHTDVLFGVVKAAQRR 125
Query: 194 RPDL-KLLISSATLDAEKFSDYF 215
R +L KL + + A D F
Sbjct: 126 RKELRKLPLKVIVMSATMDVDLF 148
>UNIPROTKB|Q9H6R0 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000182
"rDNA binding" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CH471108 GO:GO:0005654
GO:GO:0005730 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0000182 GO:GO:0045943 HOVERGEN:HBG039428
EMBL:AK025625 EMBL:AK026944 EMBL:AK295074 EMBL:AC004148
EMBL:BC030017 EMBL:CR936655 IPI:IPI00302860 IPI:IPI00655950
RefSeq:NP_001186628.1 RefSeq:NP_064547.2 UniGene:Hs.250456
ProteinModelPortal:Q9H6R0 SMR:Q9H6R0 IntAct:Q9H6R0
PhosphoSite:Q9H6R0 DMDM:296434478 PRIDE:Q9H6R0
Ensembl:ENST00000225296 GeneID:56919 KEGG:hsa:56919 UCSC:uc002gbz.3
CTD:56919 GeneCards:GC17M005360 HGNC:HGNC:16718 MIM:614405
neXtProt:NX_Q9H6R0 PharmGKB:PA27220 InParanoid:Q9H6R0 OMA:APDYFRR
OrthoDB:EOG46Q6S1 PhylomeDB:Q9H6R0 ChiTaRS:DHX33 GenomeRNAi:56919
NextBio:62420 ArrayExpress:Q9H6R0 Bgee:Q9H6R0 CleanEx:HS_DHX33
Genevestigator:Q9H6R0 GermOnline:ENSG00000005100 Uniprot:Q9H6R0
Length = 707
Score = 914 (326.8 bits), Expect = 1.0e-91, P = 1.0e-91
Identities = 196/487 (40%), Positives = 296/487 (60%)
Query: 103 EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
+PR VAA+S+A RVS E +LG VGY++RF+D TS+ T +K++TD MLLRE + + L
Sbjct: 126 QPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSLL 185
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDL-----KLLISSATLDAEKFSDYFGS 217
YS +I+DEA ERT+ TD LFG++K R +L K+++ SAT+D + FS YF
Sbjct: 186 RKYSCVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNG 245
Query: 218 APIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTG-DILVFLTGQDEIERAE 276
AP+ + GR++P+++FYTK P+ DY+ AA+V+ QIH P+ DILVFLTGQ+EIE
Sbjct: 246 APVLYLEGRQHPIQVFYTKQPQNDYLHAALVSVFQIHQEAPSSQDILVFLTGQEEIEAMS 305
Query: 277 EILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDG 336
+ + + L +++ P+YA+LP Q ++F+ P+ RKV+++TNIAETS+TI G
Sbjct: 306 KTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAPKGYRKVIISTNIAETSITITG 365
Query: 337 IKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHR 396
IKYV+ G K K YNP +G+E L V +SK A QRTG + R G C+RLYT + +
Sbjct: 366 IKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEK 425
Query: 397 I-WMTIL-CQKYNELIWKMLSLFS----NVLVNFDFIDPPXXXXXXXXXXXXXXXGAL-N 449
MT+ Q+ N L ML L + NVL FDF+ P GAL +
Sbjct: 426 FDKMTVPEIQRCN-LASVMLQLLAMKVPNVLT-FDFMSKPSPDHIQAAIAQLDLLGALEH 483
Query: 450 KAGQLTR--VGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQ 507
K QLT +GR+MA FP++PK +KTI+ K+ C++EI+TI ++L V +S+ + P ++
Sbjct: 484 KDDQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTIVSLLSV-DSVLHNPPSRR 542
Query: 508 IYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEG 567
R F + GD + LL +Y ++ + +WC+EN++ +M ++R QL
Sbjct: 543 EEVQGVRKKF-ISSEGDHMTLLNIYRTFKNLGGNKDWCKENFVNSKNMTLVAEVRAQLRD 601
Query: 568 LFARVEI 574
+ ++ +
Sbjct: 602 ICLKMSM 608
Score = 325 (119.5 bits), Expect = 2.7e-26, P = 2.7e-26
Identities = 77/175 (44%), Positives = 107/175 (61%)
Query: 55 EMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE----------- 103
E ++ +R++LPI+ +LL + ++GETGSGKTTQIPQYLYE
Sbjct: 65 EAVELQRRSLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGIIAV 124
Query: 104 --PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPS 161
PR VAA+S+A RVS E +LG VGY++RF+D TS+ T +K++TD MLLRE + +
Sbjct: 125 TQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSL 184
Query: 162 LESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDL-KLLISSATLDAEKFSDYF 215
L YS +I+DEA ERT+ TD LFG++K R +L KL + + A D F
Sbjct: 185 LRKYSCVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVDLF 239
>FB|FBgn0031631 [details] [associations]
symbol:CG3225 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0016779 GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP
EMBL:AY069418 RefSeq:NP_608860.1 UniGene:Dm.300 SMR:Q9VR29
DIP:DIP-18193N IntAct:Q9VR29 MINT:MINT-288733
EnsemblMetazoa:FBtr0077416 GeneID:33680 KEGG:dme:Dmel_CG3225
UCSC:CG3225-RA FlyBase:FBgn0031631 InParanoid:Q9VR29
OrthoDB:EOG4H189P GenomeRNAi:33680 NextBio:784751 Uniprot:Q9VR29
Length = 678
Score = 909 (325.0 bits), Expect = 3.5e-91, P = 3.5e-91
Identities = 220/551 (39%), Positives = 318/551 (57%)
Query: 57 LQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------------- 103
L E+R+ LPI + +++L + + V+ +VGETGSGK+TQ+PQYLYE
Sbjct: 40 LMEQRERLPIRQYRDQILYCLEKHQVVILVGETGSGKSTQVPQYLYEWGWHTKGLIGITE 99
Query: 104 PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLE 163
PR V+ +++A RV+QE G +G VGY +RF + S T +K+MT+ +LLRE++ +P L
Sbjct: 100 PRRVSTVTLANRVAQERGELVGDTVGYVVRFLESMSSCTKIKFMTEGILLREVLADPLLT 159
Query: 164 SYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYF---GSAPI 220
Y V+IVDEA ER + TD + GLLK ++ R LKL+ISSAT+DA FS++F GS +
Sbjct: 160 QYGVIIVDEAHERNMLTDMILGLLKKILRKRSSLKLIISSATIDASFFSEFFSWPGSGEV 219
Query: 221 ---FKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEE 277
I GR +PV FY P DY++ + T ++H EP GDIL FLTGQ+E+ A +
Sbjct: 220 SVKLSIEGRMHPVSNFYLNEPCADYVKETVETVWKLHQKEPPGDILAFLTGQEEVLEALD 279
Query: 278 ILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGI 337
+L++ ++ L + P+Y ++ + Q +F P+ RKVVLATNIAETS+TI GI
Sbjct: 280 LLREYIAS--SEQENLKVLPMYGSMSSTDQLSVFFTPPKGTRKVVLATNIAETSITIPGI 337
Query: 338 KYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRI 397
YVI G+ KVK YNPKT +SL++ P+SKASA QR G + R PGK +RLYT +Y +
Sbjct: 338 VYVIDCGYVKVKWYNPKTCSDSLVIVPVSKASAIQRAGRAGRMRPGKVYRLYTKSDYEAL 397
Query: 398 WMTILCQ-KYNELIWKMLSL----FSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAG 452
+ + +EL +L L N+L FDF PP A+++ G
Sbjct: 398 APRQPPEMRRSELSGAILQLKALGIGNIL-RFDFPSPPPAQNLLSALESLFALDAIDEQG 456
Query: 453 QLTR-VGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYAD 511
LT+ VG +AE P LSK + + CS+EIITI A+L V SIF RP
Sbjct: 457 NLTKPVGYLLAELPFSAMLSKMLYVSGQMGCSEEIITIIALLQV-QSIFSRPASAVAQQS 515
Query: 512 N--ARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLF 569
A F + + GD I +L Y + E + E+C + ++ ++KRA +R+QL +
Sbjct: 516 GRIAHRKFEVAE-GDFITMLNAYTGFVEEGMTKEFCGQYFLIYRNLKRAHSLREQLITV- 573
Query: 570 ARVEIDTSIYS 580
AR + I+S
Sbjct: 574 ARKKYGIPIFS 584
>DICTYBASE|DDB_G0269306 [details] [associations]
symbol:dhx35 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0269306 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13117 OMA:NIFVVPP
RefSeq:XP_645858.1 ProteinModelPortal:Q55EC3
EnsemblProtists:DDB0233419 GeneID:8616802 KEGG:ddi:DDB_G0269306
InParanoid:Q55EC3 Uniprot:Q55EC3
Length = 716
Score = 569 (205.4 bits), Expect = 1.3e-90, Sum P(2) = 1.3e-90
Identities = 139/370 (37%), Positives = 206/370 (55%)
Query: 217 SAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAE 276
++ I I GR YPV++ Y + +YI+ I T + IH +P GDILVFLTGQ+EIE+
Sbjct: 244 TSTILSIEGRTYPVDIHYLEESTSNYIQTTIQTIIDIHTTQPPGDILVFLTGQEEIEKLI 303
Query: 277 -------EILKQ----RTRGLGTKIAELIICPIYANLPTELQAKIFEPTPE--RARKVVL 323
EIL+Q + + P+Y+ L Q K+FE + + RK+++
Sbjct: 304 QTLDDKFEILRQYHQQHHHQQQQPFMKYSLLPMYSGLSINKQIKVFESVGDSKKIRKIII 363
Query: 324 ATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPG 383
+TNIAETS+TIDG+ YV+ GF K+KSY+ ++G+ESL++ P SK+SANQR G + R+ G
Sbjct: 364 STNIAETSITIDGVVYVVDCGFVKIKSYDSESGLESLVIVPTSKSSANQRAGRAGRSRAG 423
Query: 384 KCFRLYTLHNYHRIW--MTIL-CQKYN--ELIWKMLSLFSNVLVNFDFIDPPXXXXXXXX 438
KC+RLYT Y ++ TI Q+ N I ++ +L + ++NFDFI P
Sbjct: 424 KCYRLYTELTYEKLLPDQTIPEIQRSNLTNTILQLKALGIDNILNFDFISQPPSSSLIRG 483
Query: 439 XXXXXXXGALNKAGQLTR-VGRQMAEFPIDPKLSKTIV--SLDKYKCSDEIITIAAMLFV 495
GAL+ G+LT G MAEFP DP SK I+ S + + CSDE ITI AML +
Sbjct: 484 LEVLYGLGALDDNGKLTNPTGMIMAEFPTDPTFSKMIIQSSSNGFNCSDECITITAMLNI 543
Query: 496 GNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSM 555
+F K +R + + + GD + LL ++N + S +WC ++ I +M
Sbjct: 544 -QGLFTNQNHK------SRKHLLVKE-GDHLTLLNIFNSFISNQSSPQWCNQHQINYKAM 595
Query: 556 KRARDIRDQL 565
+R +R QL
Sbjct: 596 QRVLQVRKQL 605
Score = 354 (129.7 bits), Expect = 1.3e-90, Sum P(2) = 1.3e-90
Identities = 91/214 (42%), Positives = 132/214 (61%)
Query: 28 SESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVG 87
+ S+FD D+ F ++ N + +Q++R +LPIY + +L + Y L I+G
Sbjct: 21 NNSLFDKDSSLSFGND--NFIYNSNQKLTIQQQRISLPIYQNRKHILYLLEKYSTLVIIG 78
Query: 88 ETGSGKTTQIPQYLYE--------------PRWVAAMSVAARVSQEMGVK-LGHEVGYSI 132
TG GK+TQIPQYL+E PR VAA+S+A RV+QEMG + +G VGYS+
Sbjct: 79 NTGCGKSTQIPQYLFESGWSDGFRTILCTQPRRVAAISLAERVAQEMGEQHVGKTVGYSV 138
Query: 133 RFEDCTSD-KTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLI 191
RF++ SD +T +KY+TD ML+RE++++P L YSV+++DEA ER+L TD L GLLK +
Sbjct: 139 RFDEKISDIETRIKYVTDGMLIREMMLDPLLLKYSVIMIDEAHERSLQTDLLMGLLKKVQ 198
Query: 192 NYRPD----------LKLLISSATLDAEKFSDYF 215
R LKL+ISSATL+A F ++F
Sbjct: 199 KKRNSTNNNNNNDNSLKLIISSATLNANDFFNFF 232
>SGD|S000001561 [details] [associations]
symbol:DHR2 "Predominantly nucleolar DEAH-box ATP-dependent
RNA helicase" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IDA;TAS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001561 GO:GO:0005524 GO:GO:0005730
EMBL:BK006944 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GO:GO:0003724 GO:GO:0000462 EMBL:AF005090 EMBL:L15328 EMBL:X75560
EMBL:Z28078 PIR:S37903 RefSeq:NP_012845.1 ProteinModelPortal:P36009
SMR:P36009 DIP:DIP-6424N IntAct:P36009 MINT:MINT-677951
STRING:P36009 PaxDb:P36009 PeptideAtlas:P36009 EnsemblFungi:YKL078W
GeneID:853784 KEGG:sce:YKL078W CYGD:YKL078w KO:K14781 OMA:PGQEEID
OrthoDB:EOG4F7RTB NextBio:974906 Genevestigator:P36009
GermOnline:YKL078W Uniprot:P36009
Length = 735
Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
Identities = 206/540 (38%), Positives = 314/540 (58%)
Query: 22 KIVDFFSESVFD--GDNFDEFESELPNKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSG 79
KIV F D D E+ L KS+ KS L + R+TLP+Y E++ +
Sbjct: 38 KIVKFNDSGEGDHVSDQRSNKENVLTYKSL-KSRASDLLKMRETLPVYQHKREIMSYIES 96
Query: 80 YPVLAIVGETGSGKTTQIPQY----LYE-----------PRWVAAMSVAARVSQEMGVKL 124
PV ++GETGSGK+TQIPQ+ LY+ PR VAA+++A RV+QE G KL
Sbjct: 97 NPVTVLIGETGSGKSTQIPQFVLEKLYDTKKHGSIAVTQPRRVAAINLATRVAQEHGCKL 156
Query: 125 GHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLF 184
G +VGYS+RF++ T+ +T LKY+TD MLLRE+++ L YSV+++DEA ERT+ TD +
Sbjct: 157 GEQVGYSVRFDNTTTTRTRLKYLTDGMLLRELMMNSDLREYSVIVIDEAHERTVLTDLIL 216
Query: 185 GLLKDLINY-RPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFYTKAPEVDYI 243
G LK LI RPDL++++ SATL AEKFS++F +API + GR++ V+ +Y KAP D +
Sbjct: 217 GFLKSLIQGPRPDLRIIVMSATLQAEKFSEFFNNAPILFVEGRKFDVKQYYLKAPTDDIV 276
Query: 244 EAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKI-AELII-CPIYAN 301
+A I +QI+ E GDIL FL GQ+EI++A I+++ + + + LI+ P+YA
Sbjct: 277 DAVIRCCIQINQGEELGDILCFLPGQEEIDKAVTIMEKIAKYVSDEAPVPLIVPYPLYAA 336
Query: 302 LPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLL 361
LP Q+ +F P RKVV +TNIAETS+TI G+K+V+ G KVK + + G+ +LL
Sbjct: 337 LPAVQQSLVFAPIKGFKRKVVFSTNIAETSVTISGVKFVVDSGLRKVKVWRHQLGLATLL 396
Query: 362 VNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIWMTILCQKYNELIWK---MLSLFS 418
PIS+ASA QR+G + R GK FRLY +Y ++ + + ML +
Sbjct: 397 TVPISQASAMQRSGRAGRESEGKSFRLYCESDYVKLPKQSEPEIARSDVTSPVLMLKRYG 456
Query: 419 -NVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSL 477
+ L+N+ + + P GAL+ G++T+ G+QMA P+ P LS ++
Sbjct: 457 VDDLLNWTWFENPGKEAIVMGLQELYELGALDTRGKITKRGQQMALLPLQPHLSSVLIKA 516
Query: 478 DKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNF-HLGD-VGDRIALLRVYNCW 535
+ C ++I I + L V N + +++ + R++ + G GD I L +++ +
Sbjct: 517 SEVGCLSQVIDIVSCLSVENLLLNPSPEERDEVNERRLSLCNAGKRYGDLIMLKELFDIY 576
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 132/388 (34%), Positives = 214/388 (55%)
Query: 194 RPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQI 253
RPDL++++ SATL AEKFS++F +API + GR++ V+ +Y KAP D ++A I +QI
Sbjct: 227 RPDLRIIVMSATLQAEKFSEFFNNAPILFVEGRKFDVKQYYLKAPTDDIVDAVIRCCIQI 286
Query: 254 HVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKI-AELII-CPIYANLPTELQAKIF 311
+ E GDIL FL GQ+EI++A I+++ + + + LI+ P+YA LP Q+ +F
Sbjct: 287 NQGEELGDILCFLPGQEEIDKAVTIMEKIAKYVSDEAPVPLIVPYPLYAALPAVQQSLVF 346
Query: 312 EPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASAN 371
P RKVV +TNIAETS+TI G+K+V+ G KVK + + G+ +LL PIS+ASA
Sbjct: 347 APIKGFKRKVVFSTNIAETSVTISGVKFVVDSGLRKVKVWRHQLGLATLLTVPISQASAM 406
Query: 372 QRTGLSERTGPGKCFRLYTLHNYHRIWMTILCQKYNELIWK---MLSLFS-NVLVNFDFI 427
QR+G + R GK FRLY +Y ++ + + ML + + L+N+ +
Sbjct: 407 QRSGRAGRESEGKSFRLYCESDYVKLPKQSEPEIARSDVTSPVLMLKRYGVDDLLNWTWF 466
Query: 428 DPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEII 487
+ P GAL+ G++T+ G+QMA P+ P LS ++ + C ++I
Sbjct: 467 ENPGKEAIVMGLQELYELGALDTRGKITKRGQQMALLPLQPHLSSVLIKASEVGCLSQVI 526
Query: 488 TIAAMLFVGNSIFYRPKDKQIYADNARMNF-HLGD-VGDRIALLRVYNCW-----RECNY 540
I + L V N + +++ + R++ + G GD I L +++ + + +
Sbjct: 527 DIVSCLSVENLLLNPSPEERDEVNERRLSLCNAGKRYGDLIMLKELFDIYFYELGKSQDA 586
Query: 541 STE---WCRENYIQVSSMKRARDIRDQL 565
S+E WC+ I + K +RDQL
Sbjct: 587 SSERNDWCKGLCISIRGFKNVIRVRDQL 614
>UNIPROTKB|I3L1L6 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AC004148 HGNC:HGNC:16718 ChiTaRS:DHX33
Ensembl:ENST00000572490 Uniprot:I3L1L6
Length = 617
Score = 861 (308.1 bits), Expect = 4.3e-86, P = 4.3e-86
Identities = 185/473 (39%), Positives = 281/473 (59%)
Query: 117 SQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQER 176
S E VGY++RF+D TS+ T +K++TD MLLRE + + L YS +I+DEA ER
Sbjct: 50 SSETWTTRSSSVGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSLLRKYSCVILDEAHER 109
Query: 177 TLSTDNLFGLLKDLINYRPDL-----KLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVE 231
T+ TD LFG++K R +L K+++ SAT+D + FS YF AP+ + GR++P++
Sbjct: 110 TIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNGAPVLYLEGRQHPIQ 169
Query: 232 LFYTKAPEVDYIEAAIVTALQIHVNEPTG-DILVFLTGQDEIERAEEILKQRTRGLGTKI 290
+FYTK P+ DY+ AA+V+ QIH P+ DILVFLTGQ+EIE + + + L
Sbjct: 170 VFYTKQPQNDYLHAALVSVFQIHQEAPSSQDILVFLTGQEEIEAMSKTCRDIAKHLPDGC 229
Query: 291 AELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKS 350
+++ P+YA+LP Q ++F+ P+ RKV+++TNIAETS+TI GIKYV+ G K K
Sbjct: 230 PAMLVLPLYASLPYAQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKK 289
Query: 351 YNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRI-WMTIL-CQKYNE 408
YNP +G+E L V +SK A QRTG + R G C+RLYT + + MT+ Q+ N
Sbjct: 290 YNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEKFDKMTVPEIQRCN- 348
Query: 409 LIWKMLSLFS----NVLVNFDFIDPPXXXXXXXXXXXXXXXGAL-NKAGQLTR--VGRQM 461
L ML L + NVL FDF+ P GAL +K QLT +GR+M
Sbjct: 349 LASVMLQLLAMKVPNVLT-FDFMSKPSPDHIQAAIAQLDLLGALEHKDDQLTLTPMGRKM 407
Query: 462 AEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGD 521
A FP++PK +KTI+ K+ C++EI+TI ++L V +S+ + P ++ R F +
Sbjct: 408 AAFPLEPKFAKTILMSPKFHCTEEILTIVSLLSV-DSVLHNPPSRREEVQGVRKKF-ISS 465
Query: 522 VGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVEI 574
GD + LL +Y ++ + +WC+EN++ +M ++R QL + ++ +
Sbjct: 466 EGDHMTLLNIYRTFKNLGGNKDWCKENFVNSKNMTLVAEVRAQLRDICLKMSM 518
>POMBASE|SPAC20H4.09 [details] [associations]
symbol:SPAC20H4.09 "ATP-dependent RNA helicase,
spliceosomal (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IC;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=ISS] [GO:0071276 "cellular response to
cadmium ion" evidence=IMP] [GO:0071585 "detoxification of cadmium
ion" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAC20H4.09
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329670
GO:GO:0008380 GO:GO:0071276 GO:GO:0071585 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 RefSeq:NP_593629.1 ProteinModelPortal:Q9HE06
EnsemblFungi:SPAC20H4.09.1 GeneID:2542874 KEGG:spo:SPAC20H4.09
OMA:NYSVIIL OrthoDB:EOG4BGD47 NextBio:20803914 Uniprot:Q9HE06
Length = 647
Score = 834 (298.6 bits), Expect = 3.1e-83, P = 3.1e-83
Identities = 204/558 (36%), Positives = 307/558 (55%)
Query: 42 SELPNKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYL 101
+E ++S+ T L ++K LPI + +LL AV + ++G TG GKTTQIPQ+L
Sbjct: 3 NEFISQSLSTLTNTPLNIQKKLLPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFL 62
Query: 102 YE--------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYM 147
YE PR + A SV+ RVS E+ G GYSI+F+ S+KT +KYM
Sbjct: 63 YEAGWASQNGIIGCTQPRRLVAKSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYM 122
Query: 148 TDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLD 207
TD +LL EI +P LE YS++I+DE ERTLSTD L G+LK ++ R D +L++SSA++D
Sbjct: 123 TDGILLNEIFFDPLLERYSIVILDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSASVD 182
Query: 208 AEKFSDYFGSAPI--FKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVF 265
A K S +FG + I G+ +PVE + + P +Y+++AI T + I+ P GDILVF
Sbjct: 183 ANKLSQFFGQDKVCTMSIEGKLFPVETLFLQKPTENYVDSAIETVININSTYPPGDILVF 242
Query: 266 LTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLAT 325
L+G+ EIE + ++ L+ P++A L + Q ++F RKV+ +T
Sbjct: 243 LSGRKEIEYCIKKIEDSLIHASEDCQTLVPLPLHAGLTVDEQMRVFNIYDGDFRKVIFST 302
Query: 326 NIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKC 385
NIAETS+TIDGI YV+ GF K + YNP T L+ PISK+SA QR+G + RT GK
Sbjct: 303 NIAETSITIDGIVYVVDSGFNKQRIYNPYTRTSKLINVPISKSSAIQRSGRAGRTMRGKV 362
Query: 386 FRLYTLHNY----HRIWMTILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXX 441
FRLYT Y IL + L+ + L ++ F F P
Sbjct: 363 FRLYTEKAYSLMKEEFEADILNCDMSPLVLFLKGLGLKNILQFPFFVRPPTVHLMAALED 422
Query: 442 XXXXGALNKAGQLTR-VGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIF 500
G L+++G LT +G Q++ +D +SK +++ +++ C+ EI++IA++L G +F
Sbjct: 423 LYLLGVLDESGNLTDPLGIQISNSFLDANISKALLTSNQFGCTHEILSIASILTAGE-VF 481
Query: 501 YRP-KDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRAR 559
Y P + A A +F + GD I L V+ + +WCR+NY+ ++++A
Sbjct: 482 YNPTSSSKNDAFVAHSSFFANE-GDIITALNVFESFVGNKKDLQWCRKNYLNYQTLRQAL 540
Query: 560 DIRDQLEGLFARVEIDTS 577
DIR L + I T+
Sbjct: 541 DIRTHLVRFLNKFSIPTA 558
>FB|FBgn0032194 [details] [associations]
symbol:CG4901 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000390 "spliceosomal complex disassembly" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AY113491
RefSeq:NP_609356.2 UniGene:Dm.10854 SMR:Q9VL25 MINT:MINT-898830
STRING:Q9VL25 EnsemblMetazoa:FBtr0079947 GeneID:34357
KEGG:dme:Dmel_CG4901 UCSC:CG4901-RA FlyBase:FBgn0032194
InParanoid:Q9VL25 OrthoDB:EOG4MW6N5 GenomeRNAi:34357 NextBio:788096
Uniprot:Q9VL25
Length = 694
Score = 793 (284.2 bits), Expect = 6.8e-79, P = 6.8e-79
Identities = 182/476 (38%), Positives = 275/476 (57%)
Query: 103 EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
+PR VAA++VA RV+QE+ +G VGY++RFED TS T ++++TD +LLRE + + L
Sbjct: 120 QPRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLTDGVLLRESIKDRLL 179
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYR-----PDLKLLISSATLDAEKFSDYFGS 217
YSV+I+DEA ERT++ D LFG++KD R +LK++++SAT+D + F +YF
Sbjct: 180 LKYSVIILDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFGNYFNC 239
Query: 218 APIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTG-DILVFLTGQDEIERAE 276
++ + GR YPV + +TK DYI +VT IH P D+L+FLTGQ+EIE
Sbjct: 240 KGMY-LEGRTYPVRVMHTKEEHEDYIHTVLVTLFHIHRTTPKNHDVLIFLTGQEEIESLA 298
Query: 277 EILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDG 336
+ ++Q + T +L + +YA L Q + F PTP RKV+LATNIAETS+TI G
Sbjct: 299 QQIRQLAKIDTTGTTDLRVFTLYAQLSQGKQLECFVPTPANVRKVILATNIAETSITIPG 358
Query: 337 IKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYT---LHN 393
I+ VI GF K KS+N G++ L ISKA A QR G + R G C+R YT + +
Sbjct: 359 IRCVIDCGFVKEKSFNTVDGLDVLKSVRISKAQAWQRAGRAGRDADGTCYRAYTKAEMDS 418
Query: 394 YHRIWMT-ILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAG 452
+ IL ++ ++L+L + NFDF+DPP GA+ K G
Sbjct: 419 FADATQPEILRTNPTSMVLQLLALDIDCN-NFDFLDPPLEDGLRSAYKSLDALGAI-KTG 476
Query: 453 Q---LTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIY 509
+T +GRQM ++P+DPK SK +++ + C +EI+++ ++L + +F +K
Sbjct: 477 DDSYITPLGRQMVQYPLDPKYSKLLLTASSFGCMEEILSLVSVLS-SDHVFVSNSEKNEM 535
Query: 510 ADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQL 565
A A F GD + LL V+N + + WC +NY+ + S+ AR++R QL
Sbjct: 536 AALAHAKFQ-SKHGDHLTLLNVFNGFLKSEKPKMWCHDNYLNLRSLTYARNVRRQL 590
Score = 307 (113.1 bits), Expect = 2.7e-24, P = 2.7e-24
Identities = 71/175 (40%), Positives = 109/175 (62%)
Query: 57 LQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYL----Y---------E 103
+++++K+LP++ +L+ + + I+ ETGSGKTTQIPQ+L Y +
Sbjct: 61 IEQQQKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLLLAGYAKNGMIGITQ 120
Query: 104 PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLE 163
PR VAA++VA RV+QE+ +G VGY++RFED TS T ++++TD +LLRE + + L
Sbjct: 121 PRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLTDGVLLRESIKDRLLL 180
Query: 164 SYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLL-ISSATLDAEKFSDYFGS 217
YSV+I+DEA ERT++ D LFG++KD R KL + A D+FG+
Sbjct: 181 KYSVIILDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFGN 235
>UNIPROTKB|C9JEW8 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 IPI:IPI00789290 ProteinModelPortal:C9JEW8 SMR:C9JEW8
STRING:C9JEW8 Ensembl:ENST00000451169 ArrayExpress:C9JEW8
Bgee:C9JEW8 Uniprot:C9JEW8
Length = 731
Score = 448 (162.8 bits), Expect = 3.4e-78, Sum P(2) = 3.4e-78
Identities = 98/190 (51%), Positives = 131/190 (68%)
Query: 103 EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
+PR VAA+SVA RV++EM LG +VGY +RF+DC+S +T +KYMTD LL+ I+ +P+L
Sbjct: 6 QPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNL 65
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLI-----NYRPDLKLLISSATLDAEKFSDYFGS 217
+SV+I+DEA ERTL+TD LFGLLK L N + LK+++ SAT++ K S +FG+
Sbjct: 66 TKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGN 125
Query: 218 APIFKIPGRRYPV-ELFYTKAPEVD-----YIEAAIVTALQIHVNEPTGDILVFLTGQDE 271
PIF IPGR YPV E F D YI+A + + IH+NE GDILVFLTGQ E
Sbjct: 126 CPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFE 185
Query: 272 IERAEEILKQ 281
IE++ E+L Q
Sbjct: 186 IEKSCELLFQ 195
Score = 368 (134.6 bits), Expect = 3.4e-78, Sum P(2) = 3.4e-78
Identities = 86/276 (31%), Positives = 143/276 (51%)
Query: 307 QAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPIS 366
Q +IF P P RK V++TNI+ TSLTIDGI+YV+ GF K ++NP+ G++ L V PIS
Sbjct: 279 QRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPIS 338
Query: 367 KASANQRTGLSERTGPGKCFRLYTLHNYHR-----IWMTILCQKYNELIWKMLSLFSNVL 421
K+ A QR+G + RT GKCFR+Y+ +++ + I ++ + L + +
Sbjct: 339 KSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDV 398
Query: 422 VNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYK 481
+ F ++DPP A++++G +TR+G M EFP+ P L+ ++
Sbjct: 399 IRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLD 458
Query: 482 CSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHL----GDVGDRIALLRVYNCWRE 537
C D ++ IAAML V N +F RP D + + + + L G D L ++ +
Sbjct: 459 CEDLLLPIAAMLSVEN-VFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKS 517
Query: 538 CNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVE 573
WC++++I + A + QL L +++
Sbjct: 518 SGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLK 553
Score = 239 (89.2 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 66/186 (35%), Positives = 94/186 (50%)
Query: 192 NYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPV-ELFYTKAPEVD-----YIEA 245
N + LK+++ SAT++ K S +FG+ PIF IPGR YPV E F D YI+A
Sbjct: 100 NRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQA 159
Query: 246 AIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLG-------TKIAELIICPI 298
+ + IH+NE GDILVFLTGQ EIE++ E+L Q + T + L+I P
Sbjct: 160 IVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPC 219
Query: 299 YANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGME 358
Y ++ T Q + T + K + + T LTI GI V H + + N K +
Sbjct: 220 YGSMTTVSQTSLTFVTHIQIMKQISENQHSLTGLTIAGITGVSHHARPRNMTCNEKLNQQ 279
Query: 359 SLLVNP 364
+ P
Sbjct: 280 RRIFLP 285
Score = 40 (19.1 bits), Expect = 1.1e-43, Sum P(2) = 1.1e-43
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 288 TKIAELIICPIYANLPTELQAKIFE 312
TK+ I+CPI +L K+ E
Sbjct: 629 TKVYARIVCPIRYEWVRDLLPKLHE 653
>UNIPROTKB|Q608K8 [details] [associations]
symbol:MCA1482 "ATP-dependent helicase HrpA" species:243233
"Methylococcus capsulatus str. Bath" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR010222
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:AE017282 GenomeReviews:AE017282_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_113939.1 ProteinModelPortal:Q608K8 GeneID:3104911
KEGG:mca:MCA1482 PATRIC:22606802 Uniprot:Q608K8
Length = 1294
Score = 791 (283.5 bits), Expect = 7.4e-78, P = 7.4e-78
Identities = 202/539 (37%), Positives = 300/539 (55%)
Query: 59 EERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE-------------PR 105
E + LP+ E+ +A+ V+ + GETGSGKTTQ+P+ E PR
Sbjct: 69 EYPEELPVSERRGEIAEAIRQNQVVIVCGETGSGKTTQLPKICLEAGRGIQGYIGHTQPR 128
Query: 106 WVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESY 165
+AA SVAAR++ E+ LG VGY +RF D T +++K MTD +LL E + L+ Y
Sbjct: 129 RIAARSVAARIADELKRPLGETVGYKVRFHDQTRPDSLIKLMTDGILLAETQTDRFLDQY 188
Query: 166 SVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPG 225
LIVDEA ER+L+ D L G LK L+ R DLKL+I+SAT+D E+FS +F +API ++PG
Sbjct: 189 DTLIVDEAHERSLNIDFLLGYLKWLLPRRHDLKLVITSATIDPERFSRHFDNAPIVRVPG 248
Query: 226 RRYPVELFY----TKAPEVDYIEA----AIVTAL-QIHVNEPTGDILVFLTGQDEIERAE 276
R YPVE+ Y + E D E AI+ A+ ++H E TGDIL+FL+G+ EI
Sbjct: 249 RTYPVEIRYRPPDSAEEESDETERGEQQAILDAVDELH-RENTGDILIFLSGEREIRDTA 307
Query: 277 EILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDG 336
E L++ A+ + P+Y+ L Q KIF+P R++VLATN+AETSLT+ G
Sbjct: 308 ESLRKHHP------ADCEVLPLYSRLTVSEQEKIFKP--HGRRRIVLATNVAETSLTVPG 359
Query: 337 IKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNY-H 395
I+ VI G+A++ Y+ ++ ++ L + IS+ASANQR G R GPG C RLY+ ++ +
Sbjct: 360 IRGVIDAGYARISRYSHRSKLQRLPIEKISRASANQRAGRCGRVGPGVCIRLYSEQDFLN 419
Query: 396 RIWMT---ILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAG 452
R T IL +I +M +L + F F++PP AL+ G
Sbjct: 420 RPEFTDPEILRTNLAAVILQMKALNLGDIRVFPFVEPPDERLVRDGLRTLQEINALDAQG 479
Query: 453 QLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADN 512
+LT +GR++A P+DP+L + +++ + C E+ I A L V + RP DK AD
Sbjct: 480 RLTELGRRLARLPVDPRLGRILLAGAEENCLSEVCIIVAALSVPDPR-ERPADKAQAADQ 538
Query: 513 ARMNFHLGDVGDRIALLRVYNCWRECNYST------EWCRENYIQVSSMKRARDIRDQL 565
F D D +A+L ++N + E ++CR+N++ M+ RDI Q+
Sbjct: 539 KHARFRHPD-SDFMAILALWNDYEEQRQHLSGSKLRQYCRDNFLSALRMREWRDIHQQI 596
>ZFIN|ZDB-GENE-061207-30 [details] [associations]
symbol:dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide
34" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR015880
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-061207-30 GO:GO:0005524
GO:GO:0000184 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GO:GO:0009790 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
CTD:9704 HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 EMBL:BX908775
IPI:IPI00503372 RefSeq:NP_001121805.1 UniGene:Dr.50626
Ensembl:ENSDART00000086943 GeneID:555838 KEGG:dre:555838
InParanoid:A2BIE5 NextBio:20881188 Uniprot:A2BIE5
Length = 1150
Score = 779 (279.3 bits), Expect = 5.9e-77, P = 5.9e-77
Identities = 185/547 (33%), Positives = 298/547 (54%)
Query: 52 STLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLY--------- 102
S L L+ E+K+LPI+ + +++++ V +PV+ + G+TG GK+TQ+PQYL
Sbjct: 150 SKLSKLRREQKSLPIFQYRDKIVELVRTHPVVVVAGDTGCGKSTQVPQYLLASGINNIAC 209
Query: 103 -EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPS 161
+PR +A +S+A RVS E + G +VGY IRFE + T L ++T+ +LLR+I + S
Sbjct: 210 TQPRRIACISLAKRVSFESLNQYGSKVGYQIRFETSRTLATKLLFLTEGLLLRQIQQDAS 269
Query: 162 LESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIF 221
L Y VLIVDE ER L D L G+L+ L++ RPDL+L++ SAT++ + FS YF AP+
Sbjct: 270 LGQYQVLIVDEVHERHLHCDFLLGVLRSLLSLRPDLRLVLMSATINIKLFSSYFNDAPVL 329
Query: 222 KIPGRRYPVELFYTKAPEVDYIEAA----------IVTAL-QIHVNEPTGDILVFLTGQD 270
++PGR +P+++ Y P + + + ++ + Q + E GD+L+FL+G
Sbjct: 330 QVPGRLFPIQVIYQPIPPEEQVSRSEKLDPRPYLRVLQGIDQRYPQEERGDLLLFLSGVA 389
Query: 271 EIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAET 330
EI +E + T I+ P+++ L Q K+F+ P RK +++TNIAET
Sbjct: 390 EISTIQEACQT----YATHTQRWIVLPLHSTLSLAQQDKVFDIAPPGVRKCIISTNIAET 445
Query: 331 SLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYT 390
S+TIDG+++V+ G K S++PK M+ L IS+AS+ QR G + RTGPG C+RLY+
Sbjct: 446 SVTIDGVRFVVDSGKVKEMSFDPKAKMQRLQEFWISRASSEQRKGRAGRTGPGVCYRLYS 505
Query: 391 LHNYHRIWMTILCQKY----NELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXG 446
+Y + + + + LI +M S+ F FIDPP G
Sbjct: 506 ESDYDAFAPYPVPEIHRVALDSLILQMKSMGLGDPRTFTFIDPPPASSIQTAVTYLREQG 565
Query: 447 ALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDK 506
AL++ G+LT +GR +A+ P+D + K +V + + ++T+AA L V S F R
Sbjct: 566 ALDEHGELTSIGRLLAQLPVDVVIGKMLVLGSVFNLVEPVLTVAAALSV-QSPFLRSAQH 624
Query: 507 QIYADNARMNFHLGDVGDRIALLRVYNCWRECNY-----STEWCRENYIQVSSMKRARDI 561
AR + + GD L+ +N W + S +WCR ++ + ++
Sbjct: 625 NPDCSTARQPLN-SNHGDPFTLMNTFNAWVQVKADRGSGSRKWCRRRGLEEQRLYEMVNL 683
Query: 562 RDQLEGL 568
R Q + L
Sbjct: 684 RRQFKEL 690
>UNIPROTKB|I3LU50 [details] [associations]
symbol:I3LU50 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00700000104421
Ensembl:ENSSSCT00000026672 OMA:GHEVAFS Uniprot:I3LU50
Length = 265
Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
Identities = 143/265 (53%), Positives = 205/265 (77%)
Query: 110 MSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLI 169
MSVA RVS+EMG LG EVGY+IRFEDCTS+ T++KYMTD +LLRE + E L+ YS +I
Sbjct: 1 MSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAII 60
Query: 170 VDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYP 229
+DEA ER+L+TD LFGLL++++ R DLKL+++SAT+DAEKF+ +FG+ PIF IPGR +P
Sbjct: 61 MDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFP 120
Query: 230 VELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTK 289
V++ ++K P+ DY+EAA+ +LQ+H++ GDIL+F+ GQ++IE + + + L
Sbjct: 121 VDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENA 180
Query: 290 IAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVK 349
A L + PIY+ LP++LQAKIF+ P+ RK ++ATNIAETSLT+DGI +VI G+ K+K
Sbjct: 181 PA-LAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLK 239
Query: 350 SYNPKTGMESLLVNPISKASANQRT 374
+NP+ GM++L + PIS+A+ANQR+
Sbjct: 240 VFNPRIGMDALQIYPISQANANQRS 264
>UNIPROTKB|Q9KS77 [details] [associations]
symbol:VC1382 "ATP-dependent helicase HrpA" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 773 (277.2 bits), Expect = 7.1e-76, P = 7.1e-76
Identities = 202/566 (35%), Positives = 306/566 (54%)
Query: 37 FDEFESELPNKS-VVKSTLEMLQ--EERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGK 93
FDE ++ VV+ + + E LP+ +++ QA++ + V+ + GETGSGK
Sbjct: 57 FDEIALDIAQSMMVVEQRKQQMPKIEYPALLPVSQKRDDIAQAIAHHQVVIVAGETGSGK 116
Query: 94 TTQIPQYLYE-------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSD 140
TTQ+P+ E PR +AA SVA R+++EM +LG VGY +RF D SD
Sbjct: 117 TTQLPKICAELGRGKYGLIGHTQPRRLAARSVANRIAEEMETELGGFVGYKVRFTDQISD 176
Query: 141 KTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLL 200
+T +K MTD +LL EI + L Y +I+DEA ER+L+ D + G LK L+ RPDLK++
Sbjct: 177 QTQIKLMTDGILLAEIQNDRFLNQYDTIIIDEAHERSLNIDFILGYLKQLLPRRPDLKVI 236
Query: 201 ISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEA------AIVTALQIH 254
I+SAT+D E+FS +F +API ++ GR YPVE+ Y D E+ I A+
Sbjct: 237 ITSATIDPERFSKHFSNAPIIEVSGRTYPVEVRYRPLAGDDDSESDRDQLEGIFQAVDEL 296
Query: 255 VNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPT 314
+E GDIL+F+ G+ EI + L +R + + I P+YA L Q KIF+P
Sbjct: 297 CDEGLGDILIFMNGEREIRDTADALSKRN------LRDTEIVPLYARLSAGEQNKIFQP- 349
Query: 315 PERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRT 374
R++VLATN+AETSLT+ GIKYVI PG A++ Y+ +T ++ L + PIS+ASANQR
Sbjct: 350 -HAGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRK 408
Query: 375 GLSERTGPGKCFRLYTLHNY-HRIWMT---ILCQKYNELIWKMLSLFSNVLVNFDFIDPP 430
G RT G C RLY+ ++ R T IL +I +M +L + F F++ P
Sbjct: 409 GRCGRTEEGICIRLYSEEDFLSRPEFTDPEILRTNLASVILQMTALGLGDIEAFPFVEAP 468
Query: 431 XXXXXXXXXXXXXXXGALNKA-----GQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDE 485
GA+N +LT G+Q+A PIDP+L++ ++ K C E
Sbjct: 469 DKRNIQDGVRLLEELGAINDQIKDPKKRLTESGKQLARLPIDPRLARMVLEASKLGCLKE 528
Query: 486 IITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRE------CN 539
++ IA+ L + + RP DKQ AD+ F+ D D + L+ +++ + N
Sbjct: 529 VMIIASALSIQDPR-ERPSDKQQSADDKHRRFNHED-SDFLTLVNLWHYIGQQQKALTSN 586
Query: 540 YSTEWCRENYIQVSSMKRARDIRDQL 565
C+ +Y+ ++ +D+ QL
Sbjct: 587 QFRRQCKLDYLNYLRVREWQDVYTQL 612
>TIGR_CMR|VC_1382 [details] [associations]
symbol:VC_1382 "ATP-dependent helicase HrpA" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GenomeReviews:AE003852_GR GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 773 (277.2 bits), Expect = 7.1e-76, P = 7.1e-76
Identities = 202/566 (35%), Positives = 306/566 (54%)
Query: 37 FDEFESELPNKS-VVKSTLEMLQ--EERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGK 93
FDE ++ VV+ + + E LP+ +++ QA++ + V+ + GETGSGK
Sbjct: 57 FDEIALDIAQSMMVVEQRKQQMPKIEYPALLPVSQKRDDIAQAIAHHQVVIVAGETGSGK 116
Query: 94 TTQIPQYLYE-------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSD 140
TTQ+P+ E PR +AA SVA R+++EM +LG VGY +RF D SD
Sbjct: 117 TTQLPKICAELGRGKYGLIGHTQPRRLAARSVANRIAEEMETELGGFVGYKVRFTDQISD 176
Query: 141 KTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLL 200
+T +K MTD +LL EI + L Y +I+DEA ER+L+ D + G LK L+ RPDLK++
Sbjct: 177 QTQIKLMTDGILLAEIQNDRFLNQYDTIIIDEAHERSLNIDFILGYLKQLLPRRPDLKVI 236
Query: 201 ISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEA------AIVTALQIH 254
I+SAT+D E+FS +F +API ++ GR YPVE+ Y D E+ I A+
Sbjct: 237 ITSATIDPERFSKHFSNAPIIEVSGRTYPVEVRYRPLAGDDDSESDRDQLEGIFQAVDEL 296
Query: 255 VNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPT 314
+E GDIL+F+ G+ EI + L +R + + I P+YA L Q KIF+P
Sbjct: 297 CDEGLGDILIFMNGEREIRDTADALSKRN------LRDTEIVPLYARLSAGEQNKIFQP- 349
Query: 315 PERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRT 374
R++VLATN+AETSLT+ GIKYVI PG A++ Y+ +T ++ L + PIS+ASANQR
Sbjct: 350 -HAGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRK 408
Query: 375 GLSERTGPGKCFRLYTLHNY-HRIWMT---ILCQKYNELIWKMLSLFSNVLVNFDFIDPP 430
G RT G C RLY+ ++ R T IL +I +M +L + F F++ P
Sbjct: 409 GRCGRTEEGICIRLYSEEDFLSRPEFTDPEILRTNLASVILQMTALGLGDIEAFPFVEAP 468
Query: 431 XXXXXXXXXXXXXXXGALNKA-----GQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDE 485
GA+N +LT G+Q+A PIDP+L++ ++ K C E
Sbjct: 469 DKRNIQDGVRLLEELGAINDQIKDPKKRLTESGKQLARLPIDPRLARMVLEASKLGCLKE 528
Query: 486 IITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRE------CN 539
++ IA+ L + + RP DKQ AD+ F+ D D + L+ +++ + N
Sbjct: 529 VMIIASALSIQDPR-ERPSDKQQSADDKHRRFNHED-SDFLTLVNLWHYIGQQQKALTSN 586
Query: 540 YSTEWCRENYIQVSSMKRARDIRDQL 565
C+ +Y+ ++ +D+ QL
Sbjct: 587 QFRRQCKLDYLNYLRVREWQDVYTQL 612
>UNIPROTKB|Q8EEY1 [details] [associations]
symbol:hrpA "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 768 (275.4 bits), Expect = 2.3e-75, P = 2.3e-75
Identities = 192/535 (35%), Positives = 303/535 (56%)
Query: 64 LPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE-------------PRWVAAM 110
LP+ E++ +A+S V+ I GETGSGKTTQ+P+ E PR +AA
Sbjct: 76 LPVSGMREDIAKAISANQVVIIAGETGSGKTTQLPKICLELGLGSRGFIGHTQPRRLAAR 135
Query: 111 SVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIV 170
SVA+RV++E+ LG VG+ +RF D ++ +K MTD +LL E+ + L+ Y +I+
Sbjct: 136 SVASRVAEELQSPLGEVVGFKVRFADALKSESYIKLMTDGILLAELTSDRYLDQYDTIII 195
Query: 171 DEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPV 230
DEA ER+L+ D + G LK ++ RPDLK++I+SAT+D E+FS +F +API ++ GR YPV
Sbjct: 196 DEAHERSLNIDFILGYLKQILKKRPDLKIIITSATIDVERFSKHFNNAPIIEVSGRTYPV 255
Query: 231 ELFY------TKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTR 284
E Y T+A ++D IE I A+ V E GDIL+F+ G+ EI E L +R
Sbjct: 256 ETRYRPLVQDTEA-DLDQIEG-IFAAVDELVAEGLGDILIFMNGEREIRDTAEQLNRRNY 313
Query: 285 GLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPG 344
+ E++ P+YA L Q+K+F + R++VLATN+AETSLT+ GI+YVI PG
Sbjct: 314 ----RDTEIL--PLYARLSYGEQSKVF--SSHTGRRIVLATNVAETSLTVPGIRYVIDPG 365
Query: 345 FAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYH-RIWMT--- 400
A++ Y+ +T ++ L + PIS+ASANQR G R GPG C RLY +++ R T
Sbjct: 366 TARISRYSYRTKVQRLPIEPISQASANQRQGRCGRVGPGICIRLYDEADFNNRPAFTDPE 425
Query: 401 ILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKA-GQ--LTRV 457
IL +I +ML++ + F FI+PP A+ + G LT +
Sbjct: 426 ILRTNLASVILQMLAIGLGDIAAFPFIEPPDPRHIRDGFLLLEELQAVKQQKGNIVLTPL 485
Query: 458 GRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNF 517
GRQ+++ P+DP+L++ ++ + C +E++ IA+ L + + RP DK+ +D A F
Sbjct: 486 GRQLSQIPVDPRLARMVIESHQLGCLNEVLVIASGLSIQDPR-ERPMDKKQASDEAHRRF 544
Query: 518 HLGDVGDRIALLRVYNCWRE------CNYSTEWCRENYIQVSSMKRARDIRDQLE 566
D ++ + ++ +E + + CR+ Y+ ++ +D+ QL+
Sbjct: 545 -ADPQSDFVSWVNLWQHLKEQQKELSASQFRKKCRDEYLAYLRVREWQDLYTQLK 598
>TIGR_CMR|SO_2229 [details] [associations]
symbol:SO_2229 "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 768 (275.4 bits), Expect = 2.3e-75, P = 2.3e-75
Identities = 192/535 (35%), Positives = 303/535 (56%)
Query: 64 LPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE-------------PRWVAAM 110
LP+ E++ +A+S V+ I GETGSGKTTQ+P+ E PR +AA
Sbjct: 76 LPVSGMREDIAKAISANQVVIIAGETGSGKTTQLPKICLELGLGSRGFIGHTQPRRLAAR 135
Query: 111 SVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIV 170
SVA+RV++E+ LG VG+ +RF D ++ +K MTD +LL E+ + L+ Y +I+
Sbjct: 136 SVASRVAEELQSPLGEVVGFKVRFADALKSESYIKLMTDGILLAELTSDRYLDQYDTIII 195
Query: 171 DEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPV 230
DEA ER+L+ D + G LK ++ RPDLK++I+SAT+D E+FS +F +API ++ GR YPV
Sbjct: 196 DEAHERSLNIDFILGYLKQILKKRPDLKIIITSATIDVERFSKHFNNAPIIEVSGRTYPV 255
Query: 231 ELFY------TKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTR 284
E Y T+A ++D IE I A+ V E GDIL+F+ G+ EI E L +R
Sbjct: 256 ETRYRPLVQDTEA-DLDQIEG-IFAAVDELVAEGLGDILIFMNGEREIRDTAEQLNRRNY 313
Query: 285 GLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPG 344
+ E++ P+YA L Q+K+F + R++VLATN+AETSLT+ GI+YVI PG
Sbjct: 314 ----RDTEIL--PLYARLSYGEQSKVF--SSHTGRRIVLATNVAETSLTVPGIRYVIDPG 365
Query: 345 FAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYH-RIWMT--- 400
A++ Y+ +T ++ L + PIS+ASANQR G R GPG C RLY +++ R T
Sbjct: 366 TARISRYSYRTKVQRLPIEPISQASANQRQGRCGRVGPGICIRLYDEADFNNRPAFTDPE 425
Query: 401 ILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKA-GQ--LTRV 457
IL +I +ML++ + F FI+PP A+ + G LT +
Sbjct: 426 ILRTNLASVILQMLAIGLGDIAAFPFIEPPDPRHIRDGFLLLEELQAVKQQKGNIVLTPL 485
Query: 458 GRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNF 517
GRQ+++ P+DP+L++ ++ + C +E++ IA+ L + + RP DK+ +D A F
Sbjct: 486 GRQLSQIPVDPRLARMVIESHQLGCLNEVLVIASGLSIQDPR-ERPMDKKQASDEAHRRF 544
Query: 518 HLGDVGDRIALLRVYNCWRE------CNYSTEWCRENYIQVSSMKRARDIRDQLE 566
D ++ + ++ +E + + CR+ Y+ ++ +D+ QL+
Sbjct: 545 -ADPQSDFVSWVNLWQHLKEQQKELSASQFRKKCRDEYLAYLRVREWQDLYTQLK 598
>UNIPROTKB|P43329 [details] [associations]
symbol:hrpA species:83333 "Escherichia coli K-12"
[GO:0004386 "helicase activity" evidence=IEA;IMP] [GO:0009451 "RNA
modification" evidence=IMP] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0006397 "mRNA processing"
evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:D42105
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0009451 PIR:H64892 RefSeq:NP_415931.4 RefSeq:YP_489680.1
ProteinModelPortal:P43329 SMR:P43329 DIP:DIP-9937N IntAct:P43329
MINT:MINT-1229564 PRIDE:P43329 EnsemblBacteria:EBESCT00000000014
EnsemblBacteria:EBESCT00000015011 GeneID:12932513 GeneID:948444
KEGG:ecj:Y75_p1389 KEGG:eco:b1413 PATRIC:32118112 EchoBASE:EB2772
EcoGene:EG12936 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 BioCyc:EcoCyc:G6732-MONOMER
BioCyc:ECOL316407:JW5905-MONOMER Genevestigator:P43329
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967 Uniprot:P43329
Length = 1300
Score = 760 (272.6 bits), Expect = 1.7e-74, P = 1.7e-74
Identities = 192/535 (35%), Positives = 295/535 (55%)
Query: 64 LPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE-------------PRWVAAM 110
LP+ +++L+A+ + V+ + GETGSGKTTQ+P+ E PR +AA
Sbjct: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136
Query: 111 SVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIV 170
+VA R+++E+ + G +GY +RF D SD T++K MTD +LL EI + L Y +I+
Sbjct: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196
Query: 171 DEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPV 230
DEA ER+L+ D L G LK+L+ RPDLK++I+SAT+D E+FS +F +API ++ GR YPV
Sbjct: 197 DEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPV 256
Query: 231 ELFYTK-APEVDYIEA----AIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRG 285
E+ Y E D E AI A+ E GDIL+F++G+ EI + L +
Sbjct: 257 EVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNK---- 312
Query: 286 LGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGF 345
L + E++ P+YA L Q ++F+ R++VLATN+AETSLT+ GIKYVI PG
Sbjct: 313 LNLRHTEIL--PLYARLSNSEQNRVFQS--HSGRRIVLATNVAETSLTVPGIKYVIDPGT 368
Query: 346 AKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNY-HRIWMT---I 401
A++ Y+ +T ++ L + PIS+ASANQR G R G C RLY+ ++ R T I
Sbjct: 369 ARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEI 428
Query: 402 LCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALN-----KAGQLTR 456
L +I +M +L + F F++ P GA+ A +LT
Sbjct: 429 LRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTP 488
Query: 457 VGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMN 516
+GRQ+++ P+DP+L++ ++ K+ C E + I + L + + RP DKQ +D
Sbjct: 489 LGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPR-ERPMDKQQASDEKHRR 547
Query: 517 FHLGDVGDRIALLRVYNCWRE------CNYSTEWCRENYIQVSSMKRARDIRDQL 565
FH + D +A + ++N E N CR +Y+ ++ +DI QL
Sbjct: 548 FHDKE-SDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQL 601
>UNIPROTKB|G4NBP1 [details] [associations]
symbol:MGG_00523 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase PRP2" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CM001235 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 RefSeq:XP_003718533.1 EnsemblFungi:MGG_00523T0
GeneID:2674513 KEGG:mgr:MGG_00523 Uniprot:G4NBP1
Length = 803
Score = 508 (183.9 bits), Expect = 4.4e-74, Sum P(3) = 4.4e-74
Identities = 120/358 (33%), Positives = 191/358 (53%)
Query: 222 KIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPT-GDILVFLTGQDEIERAEEILK 280
KI GR++PVE+ ++ P + + T +IH EP GDILVFL GQ+ IE + +++
Sbjct: 341 KIEGRQFPVEIIHSPKPVPVLADEVVKTVFKIHCGEPLPGDILVFLYGQEPIEEIQRLIE 400
Query: 281 QRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYV 340
+ L + + ++ P++ L E Q F P R RKVVLATNIAETS+T+ G++YV
Sbjct: 401 EYAATLASDVPKIKALPLFGQLSMEAQHTAFRPLKGRVRKVVLATNIAETSVTVPGVRYV 460
Query: 341 IHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRI--- 397
I G +K+K Y G+ESLLV+ ISK+SA QR G + R PGKC+RLYT Y +
Sbjct: 461 IDTGKSKMKQYRASLGLESLLVDAISKSSAIQRAGRAGREAPGKCYRLYTEDVYKEMRDA 520
Query: 398 -WMTILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTR 456
IL E M++ + L+ F +D P GA++ G +T
Sbjct: 521 DLPEILRNNVREAALIMMARGVDDLLTFPLMDTPKISRMEKAMVQLNILGAIDDEGAITE 580
Query: 457 VGRQMAEFPIDPKLSKTIVSLDK--YKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNAR 514
+G++MA P+ L + +++ Y C E+I I + + G+ IF++ + ++ +
Sbjct: 581 LGKKMARLPVAAPLGRVLLAAASPAYDCLLEVIDIISCISGGDDIFHQLQSEEAREEVEE 640
Query: 515 MNFHL----GDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGL 568
L GD+ + +++Y E + TEWC++ I + +M++A +IR QL L
Sbjct: 641 YRRELRRREGDLMVYLTTMQMYTA--ENSDRTEWCKKRKINLRTMRQALNIRRQLRSL 696
Score = 178 (67.7 bits), Expect = 4.4e-74, Sum P(3) = 4.4e-74
Identities = 51/138 (36%), Positives = 77/138 (55%)
Query: 103 EPRWVAAMSVAARVSQEMGVKL------GHE-------VGYSIRFEDCTSDKTVLKYMTD 149
+PR VAA ++A RV++E G L G + VGYS+RF+ T +K++T+
Sbjct: 187 QPRRVAATTLAHRVAREAGTPLQPSGTSGAKPGAAEGLVGYSVRFDHNVPKGTKIKFLTE 246
Query: 150 CMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPD--------LKLLI 201
MLL+E++ +PSL YS ++VDE ER + D L G LK ++ PD LK++
Sbjct: 247 GMLLQELLHDPSLRQYSAVVVDEVHERGIDVDLLCGFLKQML-LSPDKPGRGGLPLKVVA 305
Query: 202 SSATLDAEKFSDYFGSAP 219
SAT + E ++F S P
Sbjct: 306 MSATANIETLENFF-SIP 322
Score = 108 (43.1 bits), Expect = 4.4e-74, Sum P(3) = 4.4e-74
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 61 RKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYEPRW 106
RK LPI+ + + + VL +VGETGSGK+TQ+PQ+L + W
Sbjct: 114 RKALPIWQHQGAIREHLRKNDVLILVGETGSGKSTQVPQFLADEEW 159
>UNIPROTKB|E2RTK4 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006692 Uniprot:E2RTK4
Length = 1140
Score = 745 (267.3 bits), Expect = 3.3e-73, P = 3.3e-73
Identities = 192/548 (35%), Positives = 286/548 (52%)
Query: 54 LEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLY----------E 103
L LQ ER LPI + +LQ + + V+ + G+TG GK+TQ+PQYL +
Sbjct: 151 LAKLQHERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSHVACTQ 210
Query: 104 PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLE 163
PR +A +S+A RVS E + G +VGY IRFE + T + ++T +LLR+I EPSL
Sbjct: 211 PRRIACISLAKRVSFESLSQYGSQVGYQIRFESTRTAATKIVFLTVGLLLRQIQREPSLP 270
Query: 164 SYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKI 223
Y VLIVDE ER L D L G+L+ L+ RPDLK+++ SAT++ FS YFG+AP+ ++
Sbjct: 271 QYQVLIVDEVHERHLHNDFLLGVLRRLLPKRPDLKVILMSATINISLFSSYFGTAPVVQV 330
Query: 224 PGRRYPVELFY---------TKAPEVDYIEAAIVTALQIHVN----EPTGDILVFLTGQD 270
PGR +P+ + Y +K+ ++D + L+ N E GD+LVFL+G
Sbjct: 331 PGRLFPITVVYQPQEAEPVASKSEKLD--PGPFLRVLEAIDNKYPPEERGDLLVFLSGMA 388
Query: 271 EIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAET 330
EI +L + + ++ ++ P+++ L Q K+F+ P RK +L+TNIAET
Sbjct: 389 EIS---SVL-EAAQTYASRTQRWVVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAET 444
Query: 331 SLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYT 390
S+TIDGI++V+ G K Y+P+ + L IS+ASA QR G + RTGPG CFRLY
Sbjct: 445 SVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKGRAGRTGPGVCFRLYA 504
Query: 391 LHNYHRIWM----TILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXG 446
+Y I + L+ +M S+ F FI+PP G
Sbjct: 505 ESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPASLETAILYLQDQG 564
Query: 447 ALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDK 506
AL+ + LT +G +A+ P+D + K ++ + ++ ++TIAA L V S F R
Sbjct: 565 ALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAALSV-QSPFTRSAQS 623
Query: 507 QIYADNARMNFHLGDVGDRIALLRVYNCW------RECNYSTEWCRENYIQVSSMKRARD 560
AR D GD L V+N W R N S +WCR I+ + +
Sbjct: 624 NPECAAARRPLE-SDQGDPFTLFNVFNAWVQVKSERSRN-SRKWCRHRGIEEHRLYEMAN 681
Query: 561 IRDQLEGL 568
+R Q + L
Sbjct: 682 LRRQFKEL 689
>UNIPROTKB|E2RTK2 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:DSDQVFH
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006694 Uniprot:E2RTK2
Length = 1177
Score = 745 (267.3 bits), Expect = 4.2e-73, P = 4.2e-73
Identities = 192/548 (35%), Positives = 286/548 (52%)
Query: 54 LEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLY----------E 103
L LQ ER LPI + +LQ + + V+ + G+TG GK+TQ+PQYL +
Sbjct: 156 LAKLQHERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSHVACTQ 215
Query: 104 PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLE 163
PR +A +S+A RVS E + G +VGY IRFE + T + ++T +LLR+I EPSL
Sbjct: 216 PRRIACISLAKRVSFESLSQYGSQVGYQIRFESTRTAATKIVFLTVGLLLRQIQREPSLP 275
Query: 164 SYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKI 223
Y VLIVDE ER L D L G+L+ L+ RPDLK+++ SAT++ FS YFG+AP+ ++
Sbjct: 276 QYQVLIVDEVHERHLHNDFLLGVLRRLLPKRPDLKVILMSATINISLFSSYFGTAPVVQV 335
Query: 224 PGRRYPVELFY---------TKAPEVDYIEAAIVTALQIHVN----EPTGDILVFLTGQD 270
PGR +P+ + Y +K+ ++D + L+ N E GD+LVFL+G
Sbjct: 336 PGRLFPITVVYQPQEAEPVASKSEKLD--PGPFLRVLEAIDNKYPPEERGDLLVFLSGMA 393
Query: 271 EIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAET 330
EI +L + + ++ ++ P+++ L Q K+F+ P RK +L+TNIAET
Sbjct: 394 EIS---SVL-EAAQTYASRTQRWVVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAET 449
Query: 331 SLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYT 390
S+TIDGI++V+ G K Y+P+ + L IS+ASA QR G + RTGPG CFRLY
Sbjct: 450 SVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKGRAGRTGPGVCFRLYA 509
Query: 391 LHNYHRIWM----TILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXG 446
+Y I + L+ +M S+ F FI+PP G
Sbjct: 510 ESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPASLETAILYLQDQG 569
Query: 447 ALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDK 506
AL+ + LT +G +A+ P+D + K ++ + ++ ++TIAA L V S F R
Sbjct: 570 ALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAALSV-QSPFTRSAQS 628
Query: 507 QIYADNARMNFHLGDVGDRIALLRVYNCW------RECNYSTEWCRENYIQVSSMKRARD 560
AR D GD L V+N W R N S +WCR I+ + +
Sbjct: 629 NPECAAARRPLE-SDQGDPFTLFNVFNAWVQVKSERSRN-SRKWCRHRGIEEHRLYEMAN 686
Query: 561 IRDQLEGL 568
+R Q + L
Sbjct: 687 LRRQFKEL 694
>TAIR|locus:2039280 [details] [associations]
symbol:AT2G35920 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14442 OMA:RIRNRSY IPI:IPI00520060
RefSeq:NP_850255.1 UniGene:At.27892 ProteinModelPortal:F4ILR7
SMR:F4ILR7 PRIDE:F4ILR7 EnsemblPlants:AT2G35920.1 GeneID:818165
KEGG:ath:AT2G35920 Uniprot:F4ILR7
Length = 995
Score = 409 (149.0 bits), Expect = 8.3e-73, Sum P(3) = 8.3e-73
Identities = 114/349 (32%), Positives = 177/349 (50%)
Query: 239 EVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPI 298
+VD +EA I ++ E G ILVFLTG DEI + E + LG ++ ++ P+
Sbjct: 486 DVDLVEATIEHICRL---EGGGAILVFLTGWDEISKLLEKINMNNF-LGDS-SKFLVLPL 540
Query: 299 YANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGME 358
+ ++PT Q +IF+ P RK+VLATNIAE+S+TID + YV+ G AK SY+ +
Sbjct: 541 HGSMPTVNQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKVA 600
Query: 359 SLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIWM----TILCQKYNELIWKML 414
LL + ISKASA+QR G + R G C+RLY Y I+ EL +
Sbjct: 601 CLLPSWISKASAHQRRGRAGRVQAGVCYRLYPKVIYDAFPQYQLPEIIRTPLQELCLHIK 660
Query: 415 SLFSNVLVNF--DFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSK 472
SL + +F + PP GALN +LT +GR + P+DP + K
Sbjct: 661 SLQVGSIGSFLAKALQPPDALAVENAIELLKTIGALNDVEELTPLGRHLCTLPVDPNIGK 720
Query: 473 TIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVY 532
++ ++C + +TIAA L S F P +++ AD A+ F D IALL+ Y
Sbjct: 721 MLLIGAIFQCVNPALTIAAALAY-RSPFVLPLNRKEEADEAKRYFAGDSCSDHIALLKAY 779
Query: 533 NCWRECNYS---TEWCRENYIQVSSMKRARDIRDQLEGLFARVE-IDTS 577
+R+ ++C +N++ +++ D+R+Q L + + +D S
Sbjct: 780 EGYRDAKRGGNEKDFCWQNFLSPVTLRMMEDMRNQFLDLLSDIGFVDKS 828
Score = 304 (112.1 bits), Expect = 8.3e-73, Sum P(3) = 8.3e-73
Identities = 62/132 (46%), Positives = 92/132 (69%)
Query: 103 EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
+PR ++A+SVA+R+S E G +G VGY IR E SD+T L + T +LLR ++ +P+L
Sbjct: 284 QPRRISAISVASRISAERGESIGESVGYQIRLESKRSDQTRLLFCTTGVLLRRLIEDPNL 343
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFK 222
+ S L+VDE ER ++ D L +L+DL+ RPDL+L++ SAT++A+ FS YFG++P
Sbjct: 344 TNVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADMFSTYFGNSPTMH 403
Query: 223 IPGRRYPV-ELF 233
IPG +PV ELF
Sbjct: 404 IPGFTFPVAELF 415
Score = 116 (45.9 bits), Expect = 8.3e-73, Sum P(3) = 8.3e-73
Identities = 25/61 (40%), Positives = 36/61 (59%)
Query: 43 ELPNKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLY 102
E K +++ L+ R+ LP + EE L +VS VL + GETG GKTTQ+PQ++
Sbjct: 207 ERQEKLKATESVKALKAFREKLPAFKMKEEFLNSVSQNQVLVVSGETGCGKTTQLPQFIL 266
Query: 103 E 103
E
Sbjct: 267 E 267
>ASPGD|ASPL0000001852 [details] [associations]
symbol:AN6085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:PGQEEID EnsemblFungi:CADANIAT00006930
Uniprot:C8V2M2
Length = 824
Score = 531 (192.0 bits), Expect = 1.2e-72, Sum P(2) = 1.2e-72
Identities = 120/370 (32%), Positives = 203/370 (54%)
Query: 206 LDAEKFSDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPT-GDILV 264
L E+ S+ G A + I GR++PV+ Y+ P D+++AA+ QIH EP GDILV
Sbjct: 349 LQKEEKSEKDGIA-VCHIKGRQFPVKTIYSPEPVHDFVDAALKVIFQIHYKEPIPGDILV 407
Query: 265 FLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLA 324
FLTGQ+ +E E ++ + G+ + ++ + P++A LP Q ++F P P R RK++LA
Sbjct: 408 FLTGQETVEALENLVNEYATGMDPSLPKIQVLPLFAALPQAAQQRVFVPAPPRTRKIILA 467
Query: 325 TNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGK 384
TNIAETS+T+ G++YV+ G AK+K + + G++SLLV PISK++A QR G + R PG+
Sbjct: 468 TNIAETSVTVSGVRYVVDCGKAKIKQFRTRLGLDSLLVKPISKSAAIQRKGRAGREAPGQ 527
Query: 385 CFRLYTLHNYHRI----WMTILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXX 440
C+RLYT +Y + IL ++ I M + + ++ F F+ P
Sbjct: 528 CYRLYTEKDYLALDEVNTPEILRCDLSQAILNMKARGVDNVIEFPFLTRPPREALEKALL 587
Query: 441 XXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKY--KCSDEIITIAAMLFVGNS 498
AL++ G+++ G +A+ P+ P L + +++ + C ++I I + L V N
Sbjct: 588 QLLSIEALDETGKISETGSHIAKLPLTPTLGRVLLAASDFGPDCLTDVIDIISCLSVEN- 646
Query: 499 IFYRP--KDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTE-WCRENYIQVSSM 555
IF ++K+ A+ AR + + + GD + +L + N + W + + +M
Sbjct: 647 IFLNTTSEEKKEAAEAARRDLYRRE-GDHLTMLATVRAYASENTDRKAWAERHLVSHRAM 705
Query: 556 KRARDIRDQL 565
+ D+R QL
Sbjct: 706 QSVMDVRKQL 715
Score = 231 (86.4 bits), Expect = 1.2e-72, Sum P(2) = 1.2e-72
Identities = 55/144 (38%), Positives = 88/144 (61%)
Query: 85 IVGETGSGKTTQIPQYLY--EPRWVAAMSVAARVSQEMGVKLGH-----EVGYSIRFEDC 137
IV E GS K + + +PR VAA+S+A RV++EMG LG +VGYS+RF+
Sbjct: 197 IVQENGSKKEAVVGGCIAITQPRRVAAISLARRVAEEMGTPLGSSSPASKVGYSVRFDTS 256
Query: 138 TSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPD- 196
S T +K++T+ MLL+E++ +P L YS ++VDE ER ++ D + G L++L++ + +
Sbjct: 257 VSPSTRVKFLTEGMLLQEMLHDPWLTKYSAIVVDEVHERGVNVDLVMGFLRNLVSGKREG 316
Query: 197 -----LKLLISSATLDAEKFSDYF 215
LK ++ SAT D E ++F
Sbjct: 317 RGGVPLKAVVMSATADMESLQEFF 340
Score = 142 (55.0 bits), Expect = 2.8e-63, Sum P(2) = 2.8e-63
Identities = 34/91 (37%), Positives = 50/91 (54%)
Query: 40 FESELPNKSV-VKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIP 98
F+ E ++ +K +ML E RK LPI+ +E+ Q + V+ ++GETGSGK+TQIP
Sbjct: 122 FKDEENGRTASLKKKAQMLYEIRKNLPIFAHGDEIRQHLRKNDVMLLIGETGSGKSTQIP 181
Query: 99 QYLYEPRWVAAMSVAARVSQEMGVKLGHEVG 129
Q+L + W + QE G K VG
Sbjct: 182 QFLVDESWCRPTKTT--IVQENGSKKEAVVG 210
>MGI|MGI:1918973 [details] [associations]
symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide 34"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00355 SMART:SM00490 SMART:SM00847
MGI:MGI:1918973 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
CTD:9704 HOGENOM:HOG000232193 ChiTaRS:DHX34 EMBL:AK129062
EMBL:AK004733 IPI:IPI00113303 RefSeq:NP_082159.3 UniGene:Mm.75259
ProteinModelPortal:Q9DBV3 SMR:Q9DBV3 PhosphoSite:Q9DBV3
PaxDb:Q9DBV3 PRIDE:Q9DBV3 Ensembl:ENSMUST00000094816
Ensembl:ENSMUST00000163968 GeneID:71723 KEGG:mmu:71723
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 NextBio:334335
Bgee:Q9DBV3 CleanEx:MM_DHX34 Genevestigator:Q9DBV3
GermOnline:ENSMUSG00000006019 Uniprot:Q9DBV3
Length = 1145
Score = 740 (265.6 bits), Expect = 1.2e-72, P = 1.2e-72
Identities = 189/546 (34%), Positives = 285/546 (52%)
Query: 54 LEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLY----------E 103
L LQ ER LPI + +LQ + + V+ + G+TG GK+TQ+PQYL +
Sbjct: 154 LAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSHVACTQ 213
Query: 104 PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLE 163
PR +A +S+A RV E + G +VGY IRFE S T + ++T +LLR+I EPSL
Sbjct: 214 PRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSLP 273
Query: 164 SYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKI 223
Y VLIVDE ER L D L G+L+ L+ RPDLK+++ SAT++ FS YF AP+ ++
Sbjct: 274 QYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVILMSATINISLFSSYFSHAPVVQV 333
Query: 224 PGRRYPVELFY---------TKAPEVDYIE-AAIVTALQI-HVNEPTGDILVFLTGQDEI 272
PGR +P+ + Y +K+ ++D ++ A+ + E GD+LVFL+G EI
Sbjct: 334 PGRLFPITVVYQPQEADQTASKSEKLDPRPFLRVLEAIDNKYPPEERGDLLVFLSGMAEI 393
Query: 273 ERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSL 332
+L + + ++ P+++ L Q K+F+ P RK +L+TNIAETS+
Sbjct: 394 TT---VL-DAAQAYASLTQRWVVLPLHSALSVSDQDKVFDVAPAGVRKCILSTNIAETSV 449
Query: 333 TIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLH 392
TIDGI++V+ G K SY+P+ ++ L IS+ASA QR G + RTGPG C+RLY
Sbjct: 450 TIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCYRLYAES 509
Query: 393 NYHRIWM----TILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGAL 448
+Y I + L+ +M S+ F FI+PP GAL
Sbjct: 510 DYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPASVETAILYLQEQGAL 569
Query: 449 NKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQI 508
+ + LT +G +A+ P+D + K ++ + ++ ++TIAA L V S F R +
Sbjct: 570 DSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLAEPVLTIAAALSV-QSPFTRSAQSNL 628
Query: 509 YADNARMNFHLGDVGDRIALLRVYNCW------RECNYSTEWCRENYIQVSSMKRARDIR 562
AR D GD L V+N W R N S +WCR ++ + ++R
Sbjct: 629 DCATARRPLE-SDQGDPFTLFNVFNAWVQVKSERSGN-SRKWCRRRGVEEHRLYEMANLR 686
Query: 563 DQLEGL 568
Q + L
Sbjct: 687 RQFKEL 692
>UNIPROTKB|Q14147 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0008270
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:D50924 EMBL:AC008754 EMBL:AK297692
IPI:IPI00382739 RefSeq:NP_055496.2 UniGene:Hs.151706
ProteinModelPortal:Q14147 SMR:Q14147 IntAct:Q14147
PhosphoSite:Q14147 DMDM:311033371 PaxDb:Q14147 PRIDE:Q14147
DNASU:9704 Ensembl:ENST00000328771 GeneID:9704 KEGG:hsa:9704
UCSC:uc010xyn.2 CTD:9704 GeneCards:GC19P047853 HGNC:HGNC:16719
HPA:HPA042159 HPA:HPA043558 neXtProt:NX_Q14147 PharmGKB:PA27221
HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B PhylomeDB:Q14147
ChiTaRS:DHX34 GenomeRNAi:9704 NextBio:36469 Bgee:Q14147
CleanEx:HS_DHX34 Genevestigator:Q14147 GermOnline:ENSG00000134815
Uniprot:Q14147
Length = 1143
Score = 739 (265.2 bits), Expect = 1.5e-72, P = 1.5e-72
Identities = 194/546 (35%), Positives = 282/546 (51%)
Query: 54 LEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLY----------E 103
L LQ ER LPI + +LQ + + V+ + G+TG GK+TQ+PQYL +
Sbjct: 152 LAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSHVACTQ 211
Query: 104 PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLE 163
PR +A +S+A RV E + G +VGY IRFE S T + ++T +LLR+I EPSL
Sbjct: 212 PRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSLP 271
Query: 164 SYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKI 223
Y VLIVDE ER L D L G+L+ L+ RPDLK+++ SAT++ FS YF +AP+ ++
Sbjct: 272 QYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINISLFSSYFSNAPVVQV 331
Query: 224 PGRRYPVELFY---------TKAPEVDYIEAAIVTALQIHVNEPT--GDILVFLTGQDEI 272
PGR +P+ + Y +K+ ++D V H P GD+LVFL+G EI
Sbjct: 332 PGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLRVLESIDHKYPPEERGDLLVFLSGMAEI 391
Query: 273 ERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSL 332
E + T T+ ++ P+++ L Q K+F+ P RK +L+TNIAETS+
Sbjct: 392 SAVLEAAQ--TYASHTQ--RWVVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSV 447
Query: 333 TIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLH 392
TIDGI++V+ G K SY+P+ ++ L IS+ASA QR G + RTGPG CFRLY
Sbjct: 448 TIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAES 507
Query: 393 NYHRIWM----TILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGAL 448
+Y I + L+ +M S+ F FI+PP GAL
Sbjct: 508 DYDAFAPYPVPEIRRVALDSLVLQMKSMSVGDPRTFPFIEPPPPASLETAILYLRDQGAL 567
Query: 449 NKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQI 508
+ + LT +G +A+ P+D + K ++ + + ++TIAA L V S F R
Sbjct: 568 DSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTIAAALSV-QSPFTRSAQSSP 626
Query: 509 YADNARMNFHLGDVGDRIALLRVYNCW------RECNYSTEWCRENYIQVSSMKRARDIR 562
AR D GD L V+N W R N S +WCR I+ + ++R
Sbjct: 627 ECAAARRPLE-SDQGDPFTLFNVFNAWVQVKSERSRN-SRKWCRRRGIEEHRLYEMANLR 684
Query: 563 DQLEGL 568
Q + L
Sbjct: 685 RQFKEL 690
>UNIPROTKB|E1BJ90 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:DAAA02047415 IPI:IPI00713665 UniGene:Bt.42016
Ensembl:ENSBTAT00000008999 NextBio:20867826 Uniprot:E1BJ90
Length = 1146
Score = 737 (264.5 bits), Expect = 2.6e-72, P = 2.6e-72
Identities = 188/545 (34%), Positives = 284/545 (52%)
Query: 54 LEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLY----------E 103
L LQ ER LPI + +LQ + + V+ + G+TG GK+TQ+PQYL +
Sbjct: 152 LAKLQRERAALPIAQYGHHILQMLKEHQVVVVAGDTGCGKSTQVPQYLLAAGCSHVACTQ 211
Query: 104 PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLE 163
PR +A +S+A RV E + G +VGY IRFE S T + ++T +LLR++ EPSL
Sbjct: 212 PRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQMQREPSLP 271
Query: 164 SYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKI 223
Y VLIVDE ER L D L G+L+ L+ RPDLK+++ SAT++ FS YFG+AP+ ++
Sbjct: 272 QYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVVLMSATINISLFSSYFGNAPVVQV 331
Query: 224 PGRRYPVELFY---------TKAPEVDYIE-AAIVTALQI-HVNEPTGDILVFLTGQDEI 272
PGR +P+ + Y +K+ ++D ++ A+ + E GD+LVFL+G EI
Sbjct: 332 PGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLRVLEAIDNKYPPEERGDLLVFLSGMAEI 391
Query: 273 ERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSL 332
E + + ++ P+++ L Q K+F+ P RK +L+TNIAETS+
Sbjct: 392 SAVLE----PAQAYASHTQRWVVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSV 447
Query: 333 TIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLH 392
TIDGI++V+ G K SY+P+ ++ L IS+ASA QR G + RTGPG CFRLY
Sbjct: 448 TIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAES 507
Query: 393 NYHRIWM----TILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGAL 448
+Y I + L+ +M S+ F FI+PP GAL
Sbjct: 508 DYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPTSLETAILYLRDQGAL 567
Query: 449 NKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQI 508
+ + LT +G +A+ P+D + K ++ + ++ ++TIAA L V + F R
Sbjct: 568 DSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAALSV-QTPFTRSAQSNP 626
Query: 509 YADNARMNFHLGDVGDRIALLRVYNCWRECNY-----STEWCRENYIQVSSMKRARDIRD 563
R D GD LL V+N W + S +WCR I+ + ++R
Sbjct: 627 ECAATRRPLE-SDQGDPFTLLNVFNTWVQVKSERGRNSRKWCRHRGIEEHRLYEMANLRR 685
Query: 564 QLEGL 568
Q + L
Sbjct: 686 QFKEL 690
>UNIPROTKB|F1RLY9 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:9704 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:FP102420 RefSeq:XP_003127294.1 Ensembl:ENSSSCT00000003454
GeneID:100515780 KEGG:ssc:100515780 Uniprot:F1RLY9
Length = 1146
Score = 729 (261.7 bits), Expect = 2.0e-71, P = 2.0e-71
Identities = 189/545 (34%), Positives = 281/545 (51%)
Query: 54 LEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLY----------E 103
L LQ ER LPI + + +LQ + + V+ + G+TG GK+TQ+PQYL +
Sbjct: 152 LARLQRERAALPISQYRDRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSHVACTQ 211
Query: 104 PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLE 163
PR +A +S+A RV E + G +VGY IRFE S T + ++T +LLR + EP+L
Sbjct: 212 PRRIACISLAKRVGLESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRHVQREPTLP 271
Query: 164 SYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKI 223
Y VLIVDE ER L D L G+L+ L+ RPDLK+++ SAT++ FS YFG AP+ ++
Sbjct: 272 QYRVLIVDEVHERHLHNDFLLGVLQRLLPRRPDLKVILMSATVNTSLFSAYFGQAPVVQV 331
Query: 224 PGRRYPVELFYTKA---PEVDYIEAA----IVTALQI----HVNEPTGDILVFLTGQDEI 272
PGR +P+ + Y P +E + L+ + E GD+LVFL+G EI
Sbjct: 332 PGRLFPITVVYQPQEAEPTASTLEKLDPRPFIRVLEAIDSKYPPEERGDLLVFLSGLAEI 391
Query: 273 ERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSL 332
E + R G ++ P+++ L Q K+F+ P RK +L+TNIAETS+
Sbjct: 392 GAVLEAAQAHARRSG----RWVVLPLHSTLSVAAQDKVFDVAPPGVRKCILSTNIAETSV 447
Query: 333 TIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLH 392
TIDGI++V+ G K SY+P+ ++ L IS+ASA QR G + RTGPG CFRLY
Sbjct: 448 TIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAES 507
Query: 393 NYHRIWM----TILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGAL 448
+Y I + L+ +M S+ F FI+PP GAL
Sbjct: 508 DYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPAASLETAILYLRDQGAL 567
Query: 449 NKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQI 508
+ + LT +G +A+ P+D + K +V ++ ++TIAA L V + +
Sbjct: 568 DGSEALTPIGSLLAQLPVDIVIGKMLVLGSVLHLAEPVLTIAAALSVQSPFTRSTRSNPK 627
Query: 509 YADNARMNFHLGDVGDRIALLRVYNCWREC--NYSTE---WCRENYIQVSSMKRARDIRD 563
A A + H GD L V+N W + + ST+ WCR I+ + ++R
Sbjct: 628 CAWRALESDH----GDPFTLFNVFNNWVQVKSDRSTKSRRWCRREGIEEHRLYEMANLRR 683
Query: 564 QLEGL 568
Q + L
Sbjct: 684 QFKEL 688
>TAIR|locus:2142459 [details] [associations]
symbol:AT5G10370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00322
SMART:SM00355 SMART:SM00490 SMART:SM00647 SMART:SM00847
Pfam:PF00097 Prosite:PS00518 GO:GO:0005524 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12818 IPI:IPI00548793
RefSeq:NP_196599.2 UniGene:At.49004 PRIDE:F4KGU4
EnsemblPlants:AT5G10370.1 GeneID:830901 KEGG:ath:AT5G10370
OMA:HQEPEIR ArrayExpress:F4KGU4 Uniprot:F4KGU4
Length = 1775
Score = 714 (256.4 bits), Expect = 3.8e-71, Sum P(3) = 3.8e-71
Identities = 193/537 (35%), Positives = 286/537 (53%)
Query: 64 LPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE-------------PRWVAAM 110
LPIY + ++L+ + ++ ++GETGSGK+TQ+ Q+L + PR +AAM
Sbjct: 306 LPIYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAM 365
Query: 111 SVAARVSQEM-GVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLI 169
++A RV +E G + V + F + + YMTD LL+ + + SL S +I
Sbjct: 366 TLADRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVI 425
Query: 170 VDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYP 229
+DEA ER+L+TD L LLK L++ R DL+L+I SAT DA++ S YF S I + GR +P
Sbjct: 426 IDEAHERSLNTDLLLALLKKLLSRRIDLRLVIMSATADAKQLSQYFFSCGILLVNGRNFP 485
Query: 230 VELFY----TKAPEV-----DYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILK 280
VE+ Y T+ V Y+ + A++IH E G IL FLT Q E+E A E
Sbjct: 486 VEIVYSPSDTEENSVVGGIASYVGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWACE--- 542
Query: 281 QRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYV 340
R + T A I P++ L E Q ++F+ P R RKV+ ATNIAETSLTI G+KYV
Sbjct: 543 ---RFI-TPSA--IALPLHGKLSFEEQFRVFQNHPGR-RKVIFATNIAETSLTIPGVKYV 595
Query: 341 IHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIWMT 400
I G K Y P+TGM L V +S++SA QR G + RT PG+C+RLY+ +++ + +
Sbjct: 596 IDSGMVKESKYEPRTGMSILKVCRVSQSSARQRAGRAGRTEPGRCYRLYSKNDFDSMNLN 655
Query: 401 ----ILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGAL-NKAG--Q 453
I + +ML+L N + F+F+D P GA+ K G +
Sbjct: 656 QEPEIRRVHLGVALLRMLALGVNNIAEFNFVDAPVPEAIAMAVQNLVQLGAVVEKNGVHE 715
Query: 454 LTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPK--DKQIYAD 511
LT+ G + + ++PKL K I+ +++ E I +AA++ +SIF R D ++ AD
Sbjct: 716 LTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKAD 775
Query: 512 NARMNFHLGDVGDRIALLRVYNCWREC--NYSTEWCRENYIQVSSMKRARDIRDQLE 566
++ F GD LL VY W +WC EN + SM+R D +LE
Sbjct: 776 RLKVQF-CNQNGDLFTLLSVYKEWASLPRERRNKWCWENSLNAKSMRRCEDTVKELE 831
Score = 39 (18.8 bits), Expect = 3.8e-71, Sum P(3) = 3.8e-71
Identities = 16/58 (27%), Positives = 25/58 (43%)
Query: 13 EKCTFEIEDKIVDFFSESVFDGDNFDEFESELP---NKSVVKSTLEMLQEERKTLPIY 67
+K EIE+K S S G F+ FE + + +V + LE K++ Y
Sbjct: 201 KKVRLEIEEKSRQVVSFSSKRGLKFEVFEKKKAIEAERDLVVNRLEEFNNAMKSILRY 258
Score = 37 (18.1 bits), Expect = 3.8e-71, Sum P(3) = 3.8e-71
Identities = 6/27 (22%), Positives = 15/27 (55%)
Query: 536 RECNYSTEWCRENYIQVSSMKRARDIR 562
++C+ +W R ++ S +A +I+
Sbjct: 1108 QDCDEKEKWGRITFLTPESAMKATEIQ 1134
>WB|WBGene00020263 [details] [associations]
symbol:T05E8.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0007413
"axonal fasciculation" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0006898 GO:GO:0040010
GO:GO:0040011 GO:GO:0003676 GO:GO:0040035 GO:GO:0007413
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO080463 PIR:T29623
RefSeq:NP_491604.3 ProteinModelPortal:O01598 SMR:O01598
STRING:O01598 PaxDb:O01598 EnsemblMetazoa:T05E8.3 GeneID:172199
KEGG:cel:CELE_T05E8.3 UCSC:T05E8.3 CTD:172199 WormBase:T05E8.3
InParanoid:O01598 OMA:KEGCIME NextBio:874451 Uniprot:O01598
Length = 856
Score = 667 (239.9 bits), Expect = 4.7e-71, Sum P(3) = 4.7e-71
Identities = 176/521 (33%), Positives = 267/521 (51%)
Query: 36 NFDEFES-ELPNKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKT 94
N+++F +LP +V + + L + + I V V A + +GS
Sbjct: 152 NYEKFSRPQLPIDAVEQQLMYELASQETLIVIGETGSGKSTQVPQLCVRAGIANSGSIAV 211
Query: 95 TQIPQYLYEPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLR 154
TQ PR VAA+S+A+RV+ EMG +G VGY +RFE+ T KT ++YMTD ++LR
Sbjct: 212 TQ-------PRRVAAISLASRVATEMGTNIGGIVGYHVRFENATCHKTKIEYMTDGIVLR 264
Query: 155 EIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPD----LKLLISSATLDAEK 210
+ ++ P L+ YS +I+DEA ER+L +D L +L+ + R + L+L+I SATL AEK
Sbjct: 265 KALVSPLLDKYSCVIIDEAHERSLHSDVLMCILRQCQDQRRETNNPLRLIIMSATLQAEK 324
Query: 211 FSDYFGSAPIFKIPGRRYPVELFYTKAPEV-------DYIEAAIVTALQIHVNEPTG-DI 262
F YF +A + + GR +P+E+F+ P++ DY+ A++ +H+ EP G DI
Sbjct: 325 FQSYFNNAKVVLVAGRTFPIEVFHVN-PKINKSFSSTDYVYNAVICVKYVHLTEPKGRDI 383
Query: 263 LVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVV 322
LVFLTG +EIE L + L L+ P+YA L E Q + F TP+ ARKV+
Sbjct: 384 LVFLTGSEEIEAVASQLAELNGSLPASADVLMPVPLYAALRPEKQKEAFRKTPQGARKVI 443
Query: 323 LATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGP 382
++TNIAETS+TI GI+ VI G K K + ++ L V+ +SKA A QR G + R P
Sbjct: 444 ISTNIAETSVTIPGIRVVIDSGKVKTKRFEAFNRIDVLKVHNVSKAQAKQRAGRAGRDAP 503
Query: 383 GKCFRLYTLHNYHRI----WMTILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXX 438
GKC+RLY+ ++H+ IL + +++ L IDPP
Sbjct: 504 GKCYRLYSREDFHKFEAENMPEILRCNLSATFLELMKLGMKNPHRLKLIDPPETDNINAA 563
Query: 439 XXXXXXXGALNKAGQ------LTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAM 492
GA+ LT +G +P+ P ++ + K C E I I A
Sbjct: 564 LLELTSLGAIRPVNSDRSKFALTEMGDAFCMYPLPPDHARILFQAQKEGCIMEAIKIVAA 623
Query: 493 LFVGNSIFYRPKDKQIYAD--NARMNFHLGDVGDRIALLRV 531
+ +++F D + AD R F + GD I LL++
Sbjct: 624 MQT-DALFSGAGDSKSDADVDRIRRRFETRE-GDHITLLKL 662
Score = 45 (20.9 bits), Expect = 4.7e-71, Sum P(3) = 4.7e-71
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 536 RECNYST-EWCRENYIQVSSMKRARDIRDQLE 566
RE N + ++C +N I +K A I +QL+
Sbjct: 692 REYNQTIRKFCNDNMINEQHLKTASMIEEQLK 723
Score = 38 (18.4 bits), Expect = 4.7e-71, Sum P(3) = 4.7e-71
Identities = 9/36 (25%), Positives = 19/36 (52%)
Query: 41 ESELPNKSVVKSTLEMLQEERKTLPIYPFWEELLQA 76
E + N +K +L++++K + + EELL +
Sbjct: 54 EQKFQNLEALKKKTMLLKKKKKQMNNFQKEEELLSS 89
>UNIPROTKB|G4NGS5 [details] [associations]
symbol:MGG_04040 "DEAH box polypeptide 37" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14780
RefSeq:XP_003719802.1 ProteinModelPortal:G4NGS5
EnsemblFungi:MGG_04040T0 GeneID:2677154 KEGG:mgr:MGG_04040
Uniprot:G4NGS5
Length = 1185
Score = 373 (136.4 bits), Expect = 5.1e-71, Sum P(4) = 5.1e-71
Identities = 89/246 (36%), Positives = 136/246 (55%)
Query: 268 GQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNI 327
G + E EE K GT + + + P+Y+ LPT+ Q ++FEP P+ +R VVLATN+
Sbjct: 650 GSEGDENEEEEFKIEEEEAGTGPSRMHVLPLYSLLPTKEQLRVFEPPPDGSRLVVLATNV 709
Query: 328 AETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFR 387
AETSLTI GI+YV G +K + Y+ TG++S V ISKASANQR G + RTGPG C+R
Sbjct: 710 AETSLTIPGIRYVFDSGRSKERKYDQLTGVQSFEVGWISKASANQREGRAGRTGPGHCWR 769
Query: 388 LYTLHNYHR-----IWMTILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXX 442
LY+ Y R +L ++ ++ S+ +VNF F PP
Sbjct: 770 LYSSAVYERDLDEFALPELLRTSLEGVVLQLKSMNLQHVVNFPFPTPPERDSLVKSEKLL 829
Query: 443 XXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYR 502
A+++ G++T+VG M+ FP+ P+ S+ ++ ++ C +T+ A L IF
Sbjct: 830 KYISAVSEEGRVTQVGYTMSIFPLSPRFSRILLLGHQHDCLHYTVTLVAALSAAE-IFI- 887
Query: 503 PKDKQI 508
P+++ I
Sbjct: 888 PENQAI 893
Score = 329 (120.9 bits), Expect = 5.1e-71, Sum P(4) = 5.1e-71
Identities = 78/198 (39%), Positives = 119/198 (60%)
Query: 103 EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
+PR VAA+S++ RV++E+G +VGY IRFE + T +K+MTD +LLRE+ + +L
Sbjct: 414 QPRRVAAVSMSKRVAEELGDH-SQKVGYQIRFEGTVNKDTAVKFMTDGVLLREVAQDLAL 472
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPD----------LKLLISSATLDAEKFS 212
YS ++VDEA ER+++TD L G+L +I R + LKL+I SATL E +
Sbjct: 473 RKYSAIVVDEAHERSVNTDILIGMLSRIIKLRAEMAQEDPTVKPLKLVIMSATLRIEDLT 532
Query: 213 D---YFGSAP-IFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTG 268
+ F + P + ++ GR+YPV L + + DY+E A + H P G +LVFLTG
Sbjct: 533 ENKNLFATPPPVLEVEGRQYPVTLHFARKTHHDYVEEAFRKISRGHKKLPPGGMLVFLTG 592
Query: 269 QDEIERAEEILKQRTRGL 286
Q+EI + + LK + G+
Sbjct: 593 QNEITQLSKRLKLQFNGV 610
Score = 108 (43.1 bits), Expect = 5.1e-71, Sum P(4) = 5.1e-71
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 57 LQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE 103
+Q R LP+ + +++A+ ++ + G TGSGKTTQIPQ+L+E
Sbjct: 350 IQSARLALPVVSEEQRIMEAIHNNNIVVVCGATGSGKTTQIPQFLFE 396
Score = 65 (27.9 bits), Expect = 5.1e-71, Sum P(4) = 5.1e-71
Identities = 16/60 (26%), Positives = 30/60 (50%)
Query: 506 KQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQL 565
+Q A N F L D D I +L+V + + +WC ++++ +K A+ +R Q+
Sbjct: 921 RQFNAVNKNFCF-LDDKSDAIKMLQVLGEFAH-EPTEKWCESHFVRFKVLKEAQKLRQQI 978
>UNIPROTKB|O83538 [details] [associations]
symbol:TP_0526 "ATP-dependent helicase (HrpA)"
species:243276 "Treponema pallidum subsp. pallidum str. Nichols"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AE000520
GenomeReviews:AE000520_GR PIR:H71312 RefSeq:NP_218966.1
ProteinModelPortal:O83538 IntAct:O83538 GeneID:2610764
KEGG:tpa:TP0526 PATRIC:20531093 OMA:WEYRERF ProtClustDB:CLSK507866
Uniprot:O83538
Length = 668
Score = 715 (256.8 bits), Expect = 1.3e-70, P = 1.3e-70
Identities = 180/535 (33%), Positives = 285/535 (53%)
Query: 62 KTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE-------------PRWVA 108
K LP+Y +++L A++ + V+ + TGSGKTTQ+P L+E PR +A
Sbjct: 5 KQLPVYSQKDKILSALAHHHVIVVESPTGSGKTTQLPLILHEAGYNEGGAIGVTQPRRIA 64
Query: 109 AMSVAARVSQE-MGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSV 167
+SV+ ++++ + V+ G VGY +RFED T +T +K MTD +LL+E+ ++P L YS+
Sbjct: 65 VLSVSEFIAKQVLHVQPGI-VGYKMRFEDHTDVETKIKVMTDGILLQEMKLDPLLSKYSI 123
Query: 168 LIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRR 227
++VDEA ER+L+ D + GLLK ++ R D +++ISSAT++ FS YF P+ KI
Sbjct: 124 IMVDEAHERSLNIDFILGLLKRVLQQRHDFRIVISSATINTAMFSRYFNECPVIKIDAVA 183
Query: 228 YPVELFY----------TKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEE 277
YPV + + TK E +E + ++ + G IL+FL G+ I+
Sbjct: 184 YPVTVIFDPPDTPASTHTKEAEAALLEKIVCIVERVIASRDKGAILIFLPGERSIKNCIT 243
Query: 278 ILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGI 337
L +L + P+Y L E Q ++F P RKVV+ATNIAETS+TID +
Sbjct: 244 RLSHERW-----FRKLFLLPLYGRLSKEEQEQVFNRAPFGKRKVVIATNIAETSITIDDV 298
Query: 338 KYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRI 397
VI G K+ SYNP + SL PIS+AS NQR G + R G C+RLY+ ++ +
Sbjct: 299 TTVIDSGLVKLNSYNPLSYTASLDETPISQASCNQRRGRAGRVRAGTCYRLYSRDDFEQR 358
Query: 398 WMTILCQKY----NELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQ 453
L + Y +E++ +M L + +FDFI PP GAL
Sbjct: 359 EPYTLEEIYRTDLSEVVMRMAELGIHDFEHFDFISPPGTHGIIGAEDTLRLLGALEDDRS 418
Query: 454 LTRVGRQMAEFPIDPKLSKTIV-SLDKYKCS-DEIITIAAMLFVGNSIFYRPKDKQIYAD 511
L+ +G+ M FP+ P+ S+ IV +L +Y S D+++ AA L + + + +D++
Sbjct: 419 LSEIGKMMCLFPLGPRQSRMIVEALRRYPHSIDDVLIAAAFLSARSPLIFS-EDQEEKTK 477
Query: 512 NARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLE 566
A F +GD ++ LR+Y + + N +C+ Y+ M +I++QLE
Sbjct: 478 KAHGTFS-DPMGDFVSFLRIYRAYAQENNKHSFCQHFYLDERIMAEISNIKEQLE 531
>UNIPROTKB|A7MBI4 [details] [associations]
symbol:DHX32 "DHX32 protein" species:9913 "Bos taurus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 GO:GO:0005524 GO:GO:0004386 InterPro:IPR014001
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
EMBL:DAAA02059534 EMBL:DAAA02059535 EMBL:DAAA02059536 EMBL:BC151578
IPI:IPI00715161 RefSeq:NP_001094614.1 UniGene:Bt.44006
Ensembl:ENSBTAT00000007619 GeneID:532978 KEGG:bta:532978
InParanoid:A7MBI4 NextBio:20875863 Uniprot:A7MBI4
Length = 744
Score = 701 (251.8 bits), Expect = 3.8e-69, P = 3.8e-69
Identities = 181/557 (32%), Positives = 299/557 (53%)
Query: 57 LQEERKTLPI----YPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYL--------YEP 104
L +ER+ LPI Y F E+LLQ+ ++ + G+ GK++Q+PQ+ Y
Sbjct: 55 LLKEREDLPIWKEKYSFMEKLLQS----QIVIVSGDAKCGKSSQVPQWCAEYCLSIDYRH 110
Query: 105 RWVA--------AMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREI 156
V A+ +A RV+ EM V +GHEVGY I FE+C + +T+L+Y TD ML RE+
Sbjct: 111 GGVVCTQVHKPTAVQLALRVADEMDVNIGHEVGYVIPFENCCTSETILRYCTDDMLQREM 170
Query: 157 VIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFG 216
+ P L SY V+I+D+ ER+++TD L GLLKD++ RP+LKL+I+S+ K S Y+G
Sbjct: 171 MSNPFLGSYGVIILDDIHERSMATDVLLGLLKDVLLARPELKLIINSSPHLINKLSSYYG 230
Query: 217 SAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAE 276
+ P+ ++ + +PVE Y + + E+ + +IH + GDI+VFL + +IE+A
Sbjct: 231 NVPLIQVKNK-HPVEAVYLSGAQKESFESILRLIFEIHHSGEKGDIVVFLACEQDIEKAY 289
Query: 277 EILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEP---TPERA----RKVVLATNIAE 329
EI+ Q L + EL++ P+Y P E + +F+P T +R R+VVL + E
Sbjct: 290 EIVCQEGSNLNPDLGELVVVPLY---PKE-KCALFKPNDETEKRCPVYQRRVVLTASSGE 345
Query: 330 TSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLY 389
+ + + +K+VI G + K YNP+ +SL+ PIS++ A R + + GK F LY
Sbjct: 346 SLICSNTVKFVIDVGVERRKVYNPRIRADSLVTQPISQSQAETRKQILSASPSGKLFCLY 405
Query: 390 TLHNYHRIWMTILCQKYNEL-IWKMLSLFSNV----LVNFDFIDPPXXXXXXXXXXXXXX 444
+ R + + E + M+ V L + DF++ P
Sbjct: 406 SEEFASRDMQPLKPAEMQEANLTSMVLFMKRVDIAGLGHCDFMNRPAPESLMQALEDLDY 465
Query: 445 XGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPK 504
AL+ G L+ G M+EFP+DP+LSK+I++ ++ C DE++TIAAM+ N + P+
Sbjct: 466 LAALDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPNCFSHLPR 525
Query: 505 DKQIYADNARMNFHLGDVGDRIALLRVYNCWREC--NYSTE-----WCRENYIQVSSMKR 557
+ A + F D GD L+ +Y +++ N ++E WC + ++ S+++
Sbjct: 526 GAEEAALSCWKTFLHPD-GDHFTLINIYKAYQDMTLNAASEHCVEKWCHDYFLNCSALRT 584
Query: 558 ARDIRDQLEGLFARVEI 574
A IR +L + R+E+
Sbjct: 585 AEVIRAELLEIIKRIEL 601
>MGI|MGI:2141813 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
MGI:MGI:2141813 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0004386 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
ChiTaRS:DHX32 EMBL:AY065980 EMBL:AK033624 EMBL:AK169005
EMBL:AK172504 EMBL:BC006911 EMBL:BC022920 IPI:IPI00127679
IPI:IPI00830523 RefSeq:NP_598702.1 UniGene:Mm.199223
ProteinModelPortal:Q8BZS9 SMR:Q8BZS9 PaxDb:Q8BZS9 PRIDE:Q8BZS9
Ensembl:ENSMUST00000033290 Ensembl:ENSMUST00000063669 GeneID:101437
KEGG:mmu:101437 UCSC:uc009kdj.1 InParanoid:Q8BZS9 NextBio:354922
Bgee:Q8BZS9 CleanEx:MM_DHX32 Genevestigator:Q8BZS9 Uniprot:Q8BZS9
Length = 744
Score = 698 (250.8 bits), Expect = 8.0e-69, P = 8.0e-69
Identities = 182/557 (32%), Positives = 294/557 (52%)
Query: 57 LQEERKTLPI----YPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYL--------YEP 104
L +ER+ LPI Y F E LLQ V+ + G++ GK++Q+PQ+ Y+
Sbjct: 55 LLKEREELPIWKEKYSFMESLLQN----QVVVVSGDSKCGKSSQVPQWCAEYCLSIHYQH 110
Query: 105 RWV--------AAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREI 156
V A+ +A RV+ EM V +GHEVGY I FE+C + +T+L+Y TD ML RE+
Sbjct: 111 GGVICTQAHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTETILRYCTDDMLQREM 170
Query: 157 VIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFG 216
+ P L SY V+I+D+ ER+L+TD L GLLKD++ RP+LKL+++ + L K S Y+G
Sbjct: 171 MSNPFLGSYGVIILDDVHERSLATDVLLGLLKDVLLARPELKLIVNCSPLLTSKLSSYYG 230
Query: 217 SAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAE 276
P+ ++ + +PVE+ Y + D E+ I +IH + GD++VFL + +IE+
Sbjct: 231 DVPVIEVRNK-HPVEVVYLSGAQKDSFESVIRLIFEIHRSGEKGDVVVFLACEQDIEKTY 289
Query: 277 EILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEP---TPERA----RKVVLATNIAE 329
E++ Q L + +L++ P+Y P E + +F P T +R R+VVL T+ E
Sbjct: 290 ELVCQEGSNLNPDVGDLVVIPLY---PKE-KCSLFRPVDETEKRCQVYQRRVVLTTSCGE 345
Query: 330 TSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLY 389
+ + +K+VI G + + YNP+ SL++ PIS++ A R L + GK F LY
Sbjct: 346 SLIWSHTVKFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIRKQLLGSSPSGKLFCLY 405
Query: 390 TLHNYHRIWMTILCQKYNEL-IWKMLSLFSNV----LVNFDFIDPPXXXXXXXXXXXXXX 444
T + + + E + M+ V L DF++ P
Sbjct: 406 TEEFASKDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGRCDFMNRPAPESLMQALEDLDY 465
Query: 445 XGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPK 504
AL+ G L+ G M+EFP+DP+LSK+I++ ++ C DE++TIAAM+ + + P
Sbjct: 466 LAALDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPSCFLHVPH 525
Query: 505 DKQIYADNARMNFHLGDVGDRIALLRVYNCWREC--NYSTE-----WCRENYIQVSSMKR 557
+ A F L GD L+ VYN +++ N + E WC + ++ S+++
Sbjct: 526 GAEEAAVTCWKTF-LHPEGDHFTLINVYNAYQDTVLNSANEHCVEMWCHDCFLSCSALRM 584
Query: 558 ARDIRDQLEGLFARVEI 574
A IR +L + R+E+
Sbjct: 585 ADVIRAELLEIIKRIEL 601
>SGD|S000004735 [details] [associations]
symbol:ECM16 "Essential DEAH-box ATP-dependent RNA helicase
specific to U3 snoRNP" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA;IDA;TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000004735 GO:GO:0005739 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BK006946 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0030686 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0032040 GO:GO:0008026
GO:GO:0003724 GO:GO:0000462 EMBL:Z48622 PIR:S53058
RefSeq:NP_013847.1 ProteinModelPortal:Q04217 SMR:Q04217
DIP:DIP-6722N IntAct:Q04217 MINT:MINT-614026 STRING:Q04217
PaxDb:Q04217 PeptideAtlas:Q04217 PRIDE:Q04217 EnsemblFungi:YMR128W
GeneID:855158 KEGG:sce:YMR128W CYGD:YMR128w
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:HQLKREE OrthoDB:EOG4KM2B8 NextBio:978575 Genevestigator:Q04217
GermOnline:YMR128W Uniprot:Q04217
Length = 1267
Score = 381 (139.2 bits), Expect = 1.0e-68, Sum P(3) = 1.0e-68
Identities = 84/236 (35%), Positives = 135/236 (57%)
Query: 268 GQDEIERAEEILKQ-RTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATN 326
G+DE + EE ++ T G T L + P+Y+ LPT+ Q ++F+ P+ +R ++ATN
Sbjct: 704 GEDEEDEEEEGFEEVLTEGQ-TANDPLYVLPLYSLLPTKEQMRVFQKPPQGSRLCIVATN 762
Query: 327 IAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCF 386
+AETSLTI G++YV+ G +K + YN G++S V +SKASANQR+G + RTGPG C+
Sbjct: 763 VAETSLTIPGVRYVVDSGRSKERKYNESNGVQSFEVGWVSKASANQRSGRAGRTGPGHCY 822
Query: 387 RLYTL----HNYHRIWMT-ILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXX 441
RLY+ H++ + IL ++ +M S+ + ++NF F PP
Sbjct: 823 RLYSSAVFEHDFEQFSKPEILRMPVESIVLQMKSMAIHNIINFPFPTPPDRVALSKAIQL 882
Query: 442 XXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGN 497
GAL+ +T G++M+ FP+ P+ SK ++ D+ C I+ I + L VG+
Sbjct: 883 LQYLGALDNKEMITEDGKKMSLFPLSPRFSKMLLVSDEKACLPYIVAIVSALSVGD 938
Score = 314 (115.6 bits), Expect = 1.0e-68, Sum P(3) = 1.0e-68
Identities = 77/194 (39%), Positives = 113/194 (58%)
Query: 103 EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
+PR VAA+S+A RV+ E+G GH+VGY IRF+ + T +K+MTD +LLRE++ + L
Sbjct: 449 QPRRVAAVSMAERVANELGDH-GHKVGYQIRFDSTAKEDTKVKFMTDGVLLREMMHDFKL 507
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYR-------P----DLKLLISSATLDAEKF 211
YS +I+DEA ER ++TD L G+L + R P LKL+I SATL F
Sbjct: 508 TKYSSIIIDEAHERNINTDILIGMLSRCVRLRAKLHKENPIEHKKLKLIIMSATLRVSDF 567
Query: 212 SD---YFGSAP-IFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLT 267
S+ F AP + ++ R++PV + + + +Y + A +IH P G ILVFLT
Sbjct: 568 SENKTLFPIAPPVLQVDARQFPVSIHFNRRTAFNYTDEAFRKTCKIHQKLPPGAILVFLT 627
Query: 268 GQDEIERAEEILKQ 281
GQ EI + L++
Sbjct: 628 GQQEITHMVKRLRK 641
Score = 119 (46.9 bits), Expect = 1.0e-68, Sum P(3) = 1.0e-68
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 52 STLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE 103
S + +Q+ R LP++ ++++A+ V+ I GETGSGKTTQ+PQ+LYE
Sbjct: 379 SRSDEIQKARIQLPVFGEEHKIMEAIHHNDVVIICGETGSGKTTQVPQFLYE 430
Score = 49 (22.3 bits), Expect = 1.4e-32, Sum P(3) = 1.4e-32
Identities = 19/71 (26%), Positives = 36/71 (50%)
Query: 466 IDPKLSKTI-----VSLDKYKCSDEIITIAAMLFVGNSIFYRPKD-KQIYADNARMNFHL 519
+DP+L K + S ++ D+ + +L V +++ Y PK+ K+I+ + NF
Sbjct: 975 MDPELKKELRSKFYKSRSQFSKLDKFSDVFRLLSVVSAMDYVPKEQKEIFM---KKNFLR 1031
Query: 520 GDVGDRIALLR 530
G + + I LR
Sbjct: 1032 GKLMEEIVKLR 1042
>TAIR|locus:2125211 [details] [associations]
symbol:AT4G01020 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS50157 PROSITE:PS51194 SMART:SM00184
SMART:SM00322 SMART:SM00355 SMART:SM00490 SMART:SM00647
SMART:SM00847 Pfam:PF00097 Prosite:PS00518 GO:GO:0005524
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 HSSP:P38398 GO:GO:0008026
EMBL:AL161491 EMBL:AL080237 KO:K12818 PIR:T10542 IPI:IPI00547897
RefSeq:NP_567206.1 UniGene:At.42970 ProteinModelPortal:P0CE10
SMR:P0CE10 PRIDE:P0CE10 EnsemblPlants:AT4G01020.1 GeneID:826439
KEGG:ath:AT4G01020 GeneFarm:1806 TAIR:At4g01020
HOGENOM:HOG000084497 PhylomeDB:P0CE10 Uniprot:P0CE10
Length = 1787
Score = 686 (246.5 bits), Expect = 3.9e-68, Sum P(3) = 3.9e-68
Identities = 187/537 (34%), Positives = 279/537 (51%)
Query: 64 LPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE-------------PRWVAAM 110
LPIY + ++L+ + ++ ++GETGSGK+TQ+ Q+L + PR +AAM
Sbjct: 303 LPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAM 362
Query: 111 SVAARVSQEM-GVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLI 169
++ RV +E G + V + F + + YMTD LL+ + + SL S +I
Sbjct: 363 TLTDRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVI 422
Query: 170 VDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYP 229
+DEA ER+L+TD L LL+ L++ R DL+L+I SAT DA + S Y I + GR +P
Sbjct: 423 IDEAHERSLNTDLLLALLRKLLSRRIDLRLVIMSATADANQLSQYLFDCGILHVNGRNFP 482
Query: 230 VELFY----TKAPEV-----DYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILK 280
VE+ Y T+ V Y + A++IH E G IL FLT Q E+E A E
Sbjct: 483 VEIVYSPSGTEENSVVGRIASYAGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWACE--- 539
Query: 281 QRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYV 340
R + L P++ L E Q +F+ P R RKV+ ATNIAETSLTI G+KYV
Sbjct: 540 ---RFVAPSAIAL---PLHGKLSFEEQFMVFQNYPGR-RKVIFATNIAETSLTIPGVKYV 592
Query: 341 IHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIWMT 400
I G K Y P+TGM L V +S++SA QR G + RT PG+C+RLY+ ++ + +
Sbjct: 593 IDSGMVKESKYEPRTGMSILKVCQVSQSSARQRAGRAGRTEPGRCYRLYSKTDFDSMNLN 652
Query: 401 ----ILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGAL-NKAG--Q 453
I + +ML+L + + F+F+D P GA+ K G +
Sbjct: 653 QEPEIRRVHLGVALLRMLALGIDNIAAFEFVDAPVPEAIAMAIQNLVQLGAVVEKNGVLE 712
Query: 454 LTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPK--DKQIYAD 511
LT+ G + + ++PKL K I+ +++ E I +AA++ +SIF R D ++ AD
Sbjct: 713 LTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKAD 772
Query: 512 NARMNFHLGDVGDRIALLRVYNCWREC--NYSTEWCRENYIQVSSMKRARDIRDQLE 566
++ F D GD LL VY W + +WC EN + SM+R D +LE
Sbjct: 773 RLKVQF-CNDNGDLFTLLSVYKEWASLPRDRRNKWCWENSLNAKSMRRCEDTVKELE 828
Score = 39 (18.8 bits), Expect = 3.9e-68, Sum P(3) = 3.9e-68
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 18 EIEDKIVDFFSESVF----DGDNFDEFESELPNKS 48
E++D++ D FS V +G + E+ +KS
Sbjct: 174 ELKDRLRDLFSSHVLSLMENGQGVKKVRMEIDDKS 208
Score = 37 (18.1 bits), Expect = 3.9e-68, Sum P(3) = 3.9e-68
Identities = 6/27 (22%), Positives = 15/27 (55%)
Query: 536 RECNYSTEWCRENYIQVSSMKRARDIR 562
++C+ +W R ++ S +A +I+
Sbjct: 1105 QDCDEKEKWGRITFLTPESAMKATEIQ 1131
>RGD|1311740 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10116 "Rattus norvegicus" [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 SMART:SM00847
RGD:1311740 GO:GO:0004386 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
OrthoDB:EOG4N30NF EMBL:CH473953 IPI:IPI00366073
RefSeq:NP_001123511.1 UniGene:Rn.162500 Ensembl:ENSRNOT00000024655
GeneID:361667 KEGG:rno:361667 UCSC:RGD:1311740 NextBio:677165
Uniprot:D3ZGJ0
Length = 751
Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
Identities = 180/557 (32%), Positives = 293/557 (52%)
Query: 57 LQEERKTLPI----YPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYL--------YEP 104
L +ER+ LPI Y F E LLQ V+ + G++ GK++Q+PQ+ Y+
Sbjct: 62 LLKEREELPIWKEKYSFMESLLQN----QVVLVSGDSKCGKSSQVPQWCAEYCLSIHYQH 117
Query: 105 RWV--------AAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREI 156
V A+ +A RV+ EM V +GHEVGY I FE+C + +T+L+Y TD ML RE+
Sbjct: 118 GGVICTQVHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTETILRYCTDDMLQREM 177
Query: 157 VIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFG 216
+ P L SY V+I+D+ ER+L+TD L GLLKD++ RP+LKL+I+ + + S Y+G
Sbjct: 178 MSNPFLGSYGVIILDDVHERSLATDVLLGLLKDVLLARPELKLIINCSPFLISRLSSYYG 237
Query: 217 SAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAE 276
+ P+ ++ + +PVE+ Y + D E+ + +IH + GD++VFL + +IE+
Sbjct: 238 NVPLLEVRNK-HPVEVVYLSGAQKDPFESVVRLIFEIHRSGEQGDVVVFLACEQDIEKTY 296
Query: 277 EILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEP---TPERA----RKVVLATNIAE 329
EI+ Q L + EL++ P+Y P E + +F P T +R R+VVL T+ E
Sbjct: 297 EIVCQEGSNLNPDVGELVVIPLY---PKE-KCSLFRPVDETEKRCQASQRRVVLTTSCGE 352
Query: 330 TSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLY 389
+ + +++VI G + + YNP+ SL++ PIS++ A R L + GK F LY
Sbjct: 353 SLIWSHTVRFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIRKQLLGSSPSGKLFCLY 412
Query: 390 TLHNYHRIWMTILCQKYNEL-IWKMLSLFSNV----LVNFDFIDPPXXXXXXXXXXXXXX 444
T + + + E + M+ V L DF++ P
Sbjct: 413 TEEFASKDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGRCDFMNRPAPESLMQALEDLDY 472
Query: 445 XGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPK 504
AL+ G L+ G M+EFP+DP+LSK+I++ ++ C DE++TIAAM+ + + P
Sbjct: 473 LAALDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPSCFLHVPH 532
Query: 505 DKQIYADNARMNFHLGDVGDRIALLRVYNCWREC--NYSTE-----WCRENYIQVSSMKR 557
+ A F L GD L+ +YN +++ N + E WC ++ S+++
Sbjct: 533 GAEEAAVTCWKTF-LHPEGDHFTLINIYNAYQDTVLNSANEHCVETWCHNCFLSCSALRM 591
Query: 558 ARDIRDQLEGLFARVEI 574
A IR +L + R+E+
Sbjct: 592 ADVIRAELLEIIKRIEL 608
>UNIPROTKB|F1SDM5 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
OMA:LACEQDI EMBL:CT841550 Ensembl:ENSSSCT00000011756 Uniprot:F1SDM5
Length = 742
Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
Identities = 179/558 (32%), Positives = 298/558 (53%)
Query: 57 LQEERKTLPI----YPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYL--------YEP 104
L +ER+ LPI Y F E LLQ+ V+ + G+ GK++Q+PQ+ Y+
Sbjct: 55 LLKEREDLPIWKEKYSFMENLLQS----QVVIVSGDATCGKSSQVPQWCAEYCLSIHYQH 110
Query: 105 RWVA--------AMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREI 156
V A+ +A RV+ EM V +GHEVGY I FE+C + +T+L+Y TD ML RE+
Sbjct: 111 GGVVCTQVHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTSETILRYCTDDMLQREM 170
Query: 157 VIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFG 216
+ P L SY V+I+D+ QER+++TD L GLLKD++ RP+LKL+I+S+ S Y+G
Sbjct: 171 MSNPFLGSYGVIILDDVQERSIATDVLLGLLKDVLLARPELKLIINSSPHLISTLSSYYG 230
Query: 217 SAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAE 276
+ P+ ++ +R PVE+ Y + + +EA + +IH + GDI+VFL + +IE+A
Sbjct: 231 NVPLIEVTSKR-PVEVVYLSGAQKEALEAVLRLIFEIHHSGEEGDIVVFLACEQDIEKAY 289
Query: 277 EILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERA-------RKVVLATNIAE 329
EI+ Q L + EL++ P+Y P E + +F+P E R+VVL + E
Sbjct: 290 EIVCQEGTNLNPDLGELVVVPLY---PKE-KCALFKPNDEAEKRCQVYQRRVVLTASSGE 345
Query: 330 TSLTIDGIKYVIHPGFAKVKS-YNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRL 388
+ + + +++VI G + K Y+P+ +SL++ PIS++ A R + + GK F L
Sbjct: 346 SLIWSNTVRFVIDVGVERRKKVYSPRIRADSLVLQPISQSQAEMRKQVLGSSSSGKLFCL 405
Query: 389 YTLHNYHRIWMTIL-CQKYNELIWKMLSLFSNV----LVNFDFIDPPXXXXXXXXXXXXX 443
Y+ + + + + + M+ V L + DF++ P
Sbjct: 406 YSEEFASKDMRPLKPAEMQHANLTSMVLFMKRVDIAGLGHCDFMNRPAPESLMQALEDLD 465
Query: 444 XXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRP 503
AL+ G L+ G M+EFP+DP+LSK+I++ ++ C DE++TIAAM+ N + P
Sbjct: 466 YLAALDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPNCFSHLP 525
Query: 504 KDKQIYADNARMNFHLGDVGDRIALLRVYNCWREC--NYSTE-----WCRENYIQVSSMK 556
+ A F L GD L+ +Y +++ N ++E WC + ++ S+++
Sbjct: 526 SGAEAEALTCWKTF-LHPEGDHFTLVNLYKAFQDVTLNSTSEHCVEKWCHDYFLNCSALR 584
Query: 557 RARDIRDQLEGLFARVEI 574
A IR +L + R+E+
Sbjct: 585 MADVIRAELLEIIKRIEL 602
>UNIPROTKB|Q7L7V1 [details] [associations]
symbol:DHX32 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX32" species:9606 "Homo sapiens"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 PROSITE:PS51194 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 EMBL:CH471066 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 EMBL:AY064247 EMBL:AL360176
UniGene:Hs.370292 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOVERGEN:HBG039428 EMBL:AF427340 EMBL:AF427341 EMBL:AY064250
EMBL:AK001556 EMBL:AK001751 EMBL:AK024869 EMBL:BC002473
EMBL:BC037925 EMBL:BC068471 EMBL:AL162051 IPI:IPI00334601
IPI:IPI00644447 PIR:T47184 RefSeq:NP_060650.2
ProteinModelPortal:Q7L7V1 SMR:Q7L7V1 IntAct:Q7L7V1 STRING:Q7L7V1
PhosphoSite:Q7L7V1 DMDM:74759011 PRIDE:Q7L7V1 DNASU:55760
Ensembl:ENST00000284688 Ensembl:ENST00000284690
Ensembl:ENST00000368721 Ensembl:ENST00000415732 GeneID:55760
KEGG:hsa:55760 UCSC:uc001lje.1 UCSC:uc001ljf.1 CTD:55760
GeneCards:GC10M127515 HGNC:HGNC:16717 HPA:HPA048872 MIM:607960
neXtProt:NX_Q7L7V1 PharmGKB:PA27219 InParanoid:Q7L7V1 OMA:LACEQDI
OrthoDB:EOG4N30NF PhylomeDB:Q7L7V1 ChiTaRS:DHX32 GenomeRNAi:55760
NextBio:60779 Bgee:Q7L7V1 Genevestigator:Q7L7V1 Uniprot:Q7L7V1
Length = 743
Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
Identities = 182/558 (32%), Positives = 296/558 (53%)
Query: 57 LQEERKTLPI----YPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYL--------YEP 104
L +ER+ LPI Y F E LLQ ++ + G+ GK+ Q+PQ+ Y+
Sbjct: 55 LLKEREDLPIWKEKYSFMENLLQN----QIVIVSGDAKCGKSAQVPQWCAEYCLSIHYQH 110
Query: 105 RWVAAMSV--------AARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREI 156
V V A RV+ EM V +GHEVGY I FE+C +++T+L+Y TD ML RE+
Sbjct: 111 GGVICTQVHKQTVVQLALRVADEMDVNIGHEVGYVIPFENCCTNETILRYCTDDMLQREM 170
Query: 157 VIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFG 216
+ P L SY V+I+D+ ER+++TD L GLLKD++ RP+LKL+I+S+ K + Y+G
Sbjct: 171 MSNPFLGSYGVIILDDIHERSIATDVLLGLLKDVLLARPELKLIINSSPHLISKLNSYYG 230
Query: 217 SAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAE 276
+ P+ ++ + +PVE+ Y + D E+ + +IH + GDI+VFL + +IE+
Sbjct: 231 NVPVIEVKNK-HPVEVVYLSEAQKDSFESILRLIFEIHHSGEKGDIVVFLACEQDIEKVC 289
Query: 277 EILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEP---TPERA----RKVVLATNIAE 329
E + Q + L + EL++ P+Y P E + +F+P T +R R+VVL T+ E
Sbjct: 290 ETVYQGSN-LNPDLGELVVVPLY---PKE-KCSLFKPLDETEKRCQVYQRRVVLTTSSGE 344
Query: 330 TSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLY 389
+ + +++VI G + K YNP+ SL++ PIS++ A R + + GK F LY
Sbjct: 345 FLIWSNSVRFVIDVGVERRKVYNPRIRANSLVMQPISQSQAEIRKQILGSSSSGKFFCLY 404
Query: 390 TLHNYHRIWMTIL--CQKYNELIWKMLSLFSNV----LVNFDFIDPPXXXXXXXXXXXXX 443
T + MT L + + M+ + L + DF++ P
Sbjct: 405 T-EEFASKDMTPLKPAEMQEANLTSMVLFMKRIDIAGLGHCDFMNRPAPESLMQALEDLD 463
Query: 444 XXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRP 503
AL+ G L+ G M+EFP+DP+LSK+I++ ++ C DE++TIAAM+ N + P
Sbjct: 464 YLAALDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEVLTIAAMVTAPNCFSHVP 523
Query: 504 KDKQIYADNARMNFHLGDVGDRIALLRVYNCWREC--NYSTE-----WCRENYIQVSSMK 556
+ A F L GD L+ +Y +++ N S+E WCR+ ++ S+++
Sbjct: 524 HGAEEAALTCWKTF-LHPEGDHFTLISIYKAYQDTTLNSSSEYCVEKWCRDYFLNCSALR 582
Query: 557 RARDIRDQLEGLFARVEI 574
A IR +L + R+E+
Sbjct: 583 MADVIRAELLEIIKRIEL 600
>TIGR_CMR|CPS_2243 [details] [associations]
symbol:CPS_2243 "ATP-dependent helicase HrpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004386
"helicase activity" evidence=ISS] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_268968.1 ProteinModelPortal:Q482P9 STRING:Q482P9
GeneID:3518699 KEGG:cps:CPS_2243 PATRIC:21467591
BioCyc:CPSY167879:GI48-2313-MONOMER Uniprot:Q482P9
Length = 1375
Score = 583 (210.3 bits), Expect = 1.2e-66, Sum P(2) = 1.2e-66
Identities = 146/395 (36%), Positives = 221/395 (55%)
Query: 64 LPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE-------------PRWVAAM 110
LPI ++ A+ V+ I GETGSGKTTQIP+ E PR +AA
Sbjct: 99 LPISENAAQISAAIDANQVVIIAGETGSGKTTQIPKICLELGRGVDGLIGHTQPRRIAAR 158
Query: 111 SVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIV 170
+VA R+++E+G KLG +VGY +RF D S+++ +K MTD +LL E+ + L Y +I+
Sbjct: 159 TVANRIAEELGTKLGEQVGYKVRFNDQVSEQSYIKLMTDGILLAEMQRDRLLLKYDTIII 218
Query: 171 DEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGS-----APIFKIPG 225
DEA ER+L+ D + G LK ++ RPDLKL+I+SAT+D ++F+ +F S API ++ G
Sbjct: 219 DEAHERSLNIDFILGYLKQILIKRPDLKLIITSATIDPQRFAKHFSSKNGLPAPIIEVSG 278
Query: 226 RRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLT--GQDEIE---RAEEILK 280
R +PVE+ Y + I+ + ++ + + L+ G +I E ++
Sbjct: 279 RTFPVEMRYRPLNDRAVIDDDDQSPQEVDIISGILSAVDELSDCGNGDILVFLNGEREIR 338
Query: 281 QRTRGL-GTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKY 339
L + + P+YA L Q +IF+P R +VLATN+AETSLT+ GIKY
Sbjct: 339 DTAAALVKANLRHTNVLPLYARLTVSEQNQIFKP--HSGRNIVLATNVAETSLTVPGIKY 396
Query: 340 VIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYH-RIW 398
VI PG A++ Y+ +T ++ L + P+S+ASANQR+G R G C RLY+ +Y R
Sbjct: 397 VIDPGTARISRYSYRTKVQRLPIEPVSQASANQRSGRCGRVSEGICIRLYSEDDYKSRAE 456
Query: 399 MT---ILCQKYNELIWKMLSLFSNVLVNFDFIDPP 430
T IL +I +M +L + NF F++ P
Sbjct: 457 FTDPEILRTNLATVILQMHALDLGDIANFPFVEAP 491
Score = 136 (52.9 bits), Expect = 1.2e-66, Sum P(2) = 1.2e-66
Identities = 42/139 (30%), Positives = 71/139 (51%)
Query: 447 ALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDK 506
A + A QLT+ GR +A+FPIDP+L+K +VS ++ C ++I+ I + L + + RP +K
Sbjct: 523 ASSTATQLTKSGRLLAKFPIDPRLAKMVVSSIEFGCIEQILIIVSALSIQDPR-ERPHEK 581
Query: 507 QIYADNARMNFHLGDVGDRIALLRVYNCWREC------NYSTEWCRENYIQVSSMKRARD 560
Q +D F D I+LL ++ E N + C+ ++ ++ +D
Sbjct: 582 QQLSDEKHNRFK-DKSSDFISLLNLWQYINEQKKDLTQNQFRKLCQREFLSYVRLREWQD 640
Query: 561 IRDQLEGLFARVEID-TSI 578
I QL+ +I TSI
Sbjct: 641 IFSQLKLTLKEQQITLTSI 659
Score = 38 (18.4 bits), Expect = 2.6e-56, Sum P(2) = 2.6e-56
Identities = 7/27 (25%), Positives = 15/27 (55%)
Query: 547 ENYIQVSSMKRARDIRDQLEGLFARVE 573
+ ++ S + + DI L+G+ R+E
Sbjct: 1271 KGFVTYSGLSKLDDIIRYLQGMLRRLE 1297
>UNIPROTKB|F1PER1 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 SMART:SM00847 GO:GO:0005524 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
EMBL:AAEX03015636 RefSeq:XP_003433686.1 Ensembl:ENSCAFT00000020520
GeneID:100685023 KEGG:cfa:100685023 Uniprot:F1PER1
Length = 745
Score = 672 (241.6 bits), Expect = 4.5e-66, P = 4.5e-66
Identities = 176/557 (31%), Positives = 296/557 (53%)
Query: 57 LQEERKTLPI----YPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYL--------YEP 104
L +ER+ LPI Y F E LLQ ++ + G+ GK++Q+PQ+ Y+
Sbjct: 55 LLKEREDLPIWKEKYSFMENLLQN----QIVIVSGDAKCGKSSQVPQWCAEYCLSIHYQH 110
Query: 105 RWVA--------AMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREI 156
V A+ +A RV+ EM V +GHEVGY I FE+C S +T+L+Y TD ML RE+
Sbjct: 111 GGVVCTQVHKPTAVQLALRVADEMDVNIGHEVGYMIPFENCCSSETILRYCTDDMLQREM 170
Query: 157 VIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFG 216
+ P L +Y V+I+D+ ER+++TD L GLLKD++ RP+LKL+I+S+ K S Y+G
Sbjct: 171 MSSPFLGNYGVIILDDIHERSIATDVLLGLLKDVLLARPELKLIINSSPHLISKLSSYYG 230
Query: 217 SAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAE 276
+ P+ ++ +++PVE+ Y + + +E+ + +IH + GDI+VFL + +IE+A
Sbjct: 231 NVPLIEVK-KQHPVEVVYLSGAQKESLESILRLIFEIHQSGEKGDIVVFLACEQDIEKAY 289
Query: 277 EILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEP---TPERA----RKVVLATNIAE 329
EI+ Q L + EL++ P+Y P E + +F+P T +R R+VVL + E
Sbjct: 290 EIVCQEGSNLNPDLGELVVVPLY---PKE-KCALFKPNDETEKRCQVYQRRVVLTASSGE 345
Query: 330 TSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLY 389
+ + + +++VI G + K YNP+ SL+ PIS++ A R + + GK F LY
Sbjct: 346 SLIWSNTVRFVIDVGVERRKVYNPRIRANSLVTQPISQSQAEIRKQILGSSSSGKLFCLY 405
Query: 390 TLHNYHRIWMTILCQKYNEL-IWKMLSLFSNV----LVNFDFIDPPXXXXXXXXXXXXXX 444
+ + + + E + M+ V L + DF++ P
Sbjct: 406 SEEFASKDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGHCDFMNRPAPESLMQALEDLDY 465
Query: 445 XGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPK 504
AL+ G L+ G M+EFP+DP+LSK+I++ ++ C +E++TIAAM+ N P
Sbjct: 466 LAALDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVEEMLTIAAMVTAPNCFSNLPH 525
Query: 505 DKQIYADNARMNFHLGDVGDRIALLRVYNCWREC--NYSTE-----WCRENYIQVSSMKR 557
+ A F L GD L+ +Y +++ N +++ WC + ++ +++
Sbjct: 526 GAEEAALTCWKTF-LHPEGDHFTLINIYKAYQDIALNSTSDHCVEKWCHDYFLNCCALRM 584
Query: 558 ARDIRDQLEGLFARVEI 574
A IR +L + R+E+
Sbjct: 585 ADVIRAELLEIVKRIEL 601
>POMBASE|SPAPB1A10.06c [details] [associations]
symbol:SPAPB1A10.06c "ATP-dependent RNA helicase Dhr1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAPB1A10.06c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 GO:GO:0032040
GO:GO:0030490 HOGENOM:HOG000201240 KO:K14780 OMA:HQLKREE
OrthoDB:EOG4KM2B8 EMBL:AB027915 RefSeq:NP_593520.1
ProteinModelPortal:Q9HDY4 STRING:Q9HDY4
EnsemblFungi:SPAPB1A10.06c.1 GeneID:2543371 KEGG:spo:SPAPB1A10.06c
NextBio:20804386 Uniprot:Q9HDY4
Length = 1183
Score = 334 (122.6 bits), Expect = 5.8e-66, Sum P(4) = 5.8e-66
Identities = 80/194 (41%), Positives = 116/194 (59%)
Query: 103 EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
+PR VAA+S+A RVS+E+ +V Y IRF+ + T +K+MTD +LLRE+ + L
Sbjct: 455 QPRRVAAVSIAKRVSEEL-TGFSSKVSYQIRFDSTINPDTAIKFMTDGILLRELSSDFLL 513
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPD----------LKLLISSATLDAEKFS 212
+YS +IVDEA ER+++TD L GLL ++ R + LKL+I SATL FS
Sbjct: 514 TAYSAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQKVKPLKLIIMSATLRVTDFS 573
Query: 213 D---YFG-SAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTG 268
+ F PI KI R+YPV + + + + DY++ A IH P G ILVFLTG
Sbjct: 574 ENKLLFSVPPPIIKIDARQYPVSIHFNRTTKPDYLQDAFDKVCLIHKRLPAGSILVFLTG 633
Query: 269 QDEIERAEEILKQR 282
Q E+E+ ++L++R
Sbjct: 634 QQEVEQLCQMLRKR 647
Score = 334 (122.6 bits), Expect = 5.8e-66, Sum P(4) = 5.8e-66
Identities = 76/223 (34%), Positives = 123/223 (55%)
Query: 293 LIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYN 352
+ + P+Y+ L TE Q K+F+ +PE R ++ATN+AETS+TI I+YV+ G AK + YN
Sbjct: 702 MYVLPLYSLLTTEDQMKVFDSSPEGHRMCIVATNVAETSITIPNIRYVVDCGKAKERVYN 761
Query: 353 PKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNY------HRIWMTILCQKY 406
KT ++ V ISKA+A+QR G + RTGPG C+RLY+ + H + IL
Sbjct: 762 EKTSVQKFEVRWISKANADQRAGRAGRTGPGHCYRLYSSAVFDSSFPLHSL-PEILRTPV 820
Query: 407 NELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPI 466
++ +M ++ + + NF F P GA++ G LT++G QM+ FP+
Sbjct: 821 ESIVLQMKNMNIDNIANFPFPTSPGRSRLEKSLKLLSNLGAIDSEGVLTKLGEQMSLFPL 880
Query: 467 DPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIY 509
P+ SK ++ ++ C +I + + L + N +F K +Y
Sbjct: 881 SPRFSKMLIIGQQHGCLPYVIALVSALSI-NQLFVS-KQSLLY 921
Score = 109 (43.4 bits), Expect = 5.8e-66, Sum P(4) = 5.8e-66
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 57 LQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE 103
+QE R LPI + +++ + V+ I G TGSGKTTQ+PQ+L+E
Sbjct: 391 IQESRLALPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFE 437
Score = 61 (26.5 bits), Expect = 5.8e-66, Sum P(4) = 5.8e-66
Identities = 11/46 (23%), Positives = 26/46 (56%)
Query: 526 IALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFAR 571
++LL + + ++C+ENY++ +++ ++R Q+ GL R
Sbjct: 971 LSLLSAVCAYDYASDKRKFCKENYLREKALEEVTNLRKQIIGLLKR 1016
Score = 42 (19.8 bits), Expect = 2.3e-28, Sum P(3) = 2.3e-28
Identities = 34/156 (21%), Positives = 61/156 (39%)
Query: 20 EDKIVDFFSESVFDGDNFDEFESELPNKSVV-KSTLE-MLQEERKTLP---IYPFWEELL 74
ED D E D+ +EF + N S K T E ++ KT+P + E+ L
Sbjct: 224 EDPEYDSAEEDYLSTDS-EEFSEDSDNSSEENKDTNEPSTKDAEKTVPEDVVNLRSEQKL 282
Query: 75 QAVSGYPVLAIVGETGSGKTTQIPQYLYEPRWVAAMSVAARVSQEMGVKLG---HEVGYS 131
Q G+P E +T++ + A Q +G +G H+V
Sbjct: 283 QPSFGHPEFE--NEDFDLETSEDDSSDDATERASRFKSWAN-KQILGADVGEKSHDVAPD 339
Query: 132 IRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSV 167
+ ++ +D + M + +RE +EP+ + +
Sbjct: 340 NKIDNPDADMVRAQRMPRKLKMREEDVEPTADDIEI 375
>UNIPROTKB|Q6P158 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR009060 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS00690 PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
EMBL:AC018693 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AK057423 EMBL:BC053623 EMBL:BC060778
EMBL:BC065278 EMBL:BC131534 EMBL:AF283512 IPI:IPI00168885
IPI:IPI00399364 IPI:IPI00749029 RefSeq:NP_945314.1
UniGene:Hs.468226 ProteinModelPortal:Q6P158 SMR:Q6P158
IntAct:Q6P158 STRING:Q6P158 PhosphoSite:Q6P158 DMDM:94710252
PaxDb:Q6P158 PeptideAtlas:Q6P158 PRIDE:Q6P158
Ensembl:ENST00000295373 GeneID:90957 KEGG:hsa:90957 UCSC:uc002rre.3
UCSC:uc002rrg.3 CTD:90957 GeneCards:GC02M039025 HGNC:HGNC:20086
HPA:HPA036160 neXtProt:NX_Q6P158 PharmGKB:PA134919698
HOVERGEN:HBG080658 InParanoid:Q6P158 KO:K13026 OMA:RAYKGWQ
OrthoDB:EOG4ZS929 PhylomeDB:Q6P158 ChiTaRS:DHX57 GenomeRNAi:90957
NextBio:77048 ArrayExpress:Q6P158 Bgee:Q6P158 CleanEx:HS_DHX57
Genevestigator:Q6P158 GermOnline:ENSG00000163214 Uniprot:Q6P158
Length = 1386
Score = 383 (139.9 bits), Expect = 6.1e-65, Sum P(3) = 6.1e-65
Identities = 109/348 (31%), Positives = 175/348 (50%)
Query: 240 VDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIY 299
++ IEA + + + P G ILVFL G EI+ E L+ + + +I P++
Sbjct: 828 LELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLH 887
Query: 300 ANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMES 359
++L +E Q +F P K++++TNIAETS+TID + YVI G K K Y+ GMES
Sbjct: 888 SSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMES 947
Query: 360 LLVNPISKASANQRTGLSERTGPGKCFRLYTLHNY-HRIWMTIL--CQKY--NELIW--K 412
L +S+A+A QR G + R G CF L+T H+Y H++ L Q+ +L K
Sbjct: 948 LEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIK 1007
Query: 413 MLSLFS--NVLVNFD-FIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPK 469
+L +FS N+ F I+PP GAL +LT +G +A P+D +
Sbjct: 1008 ILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVR 1067
Query: 470 LSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALL 529
+ K ++ ++C D +TIAA L S F P DK+ A+ ++ F + D +ALL
Sbjct: 1068 IGKLMLFGSIFRCLDPALTIAASLAF-KSPFVSPWDKKEEANQKKLEFAFAN-SDYLALL 1125
Query: 530 RVYNCW----RE-CNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARV 572
+ Y W +E S +CR+N++ ++ ++ Q L + +
Sbjct: 1126 QAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDI 1173
Score = 299 (110.3 bits), Expect = 6.1e-65, Sum P(3) = 6.1e-65
Identities = 61/132 (46%), Positives = 89/132 (67%)
Query: 103 EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
+PR ++A+SVA RV++E ++G VGY IR E S T L Y T +LLR + + +L
Sbjct: 600 QPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDTAL 659
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFK 222
+ S +IVDE ERT +D L +LKD+++ RP L++++ SATL+AE FSDYF S P+
Sbjct: 660 QGVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILMSATLNAELFSDYFNSCPVIT 719
Query: 223 IPGRRYPVELFY 234
IPGR +PV+ F+
Sbjct: 720 IPGRTFPVDQFF 731
Score = 97 (39.2 bits), Expect = 6.1e-65, Sum P(3) = 6.1e-65
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 55 EMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE 103
+ + +ER++LP + E +L + + V+ I G TG GKTTQIPQ++ +
Sbjct: 535 QSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILD 583
>UNIPROTKB|E1C9G0 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:RAYKGWQ
EMBL:AADN02041257 EMBL:AADN02041258 EMBL:AADN02041259
EMBL:AADN02041260 IPI:IPI00679513 Ensembl:ENSGALT00000023376
Uniprot:E1C9G0
Length = 1380
Score = 384 (140.2 bits), Expect = 3.0e-64, Sum P(3) = 3.0e-64
Identities = 106/350 (30%), Positives = 172/350 (49%)
Query: 240 VDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIY 299
++ IEA + + + P G +L+FL G EI+ E L+ ++ P++
Sbjct: 821 LELIEALLEWIVDGKHSYPPGAVLIFLPGLAEIKMLYEQLQSNALFNNRHSKRCVVYPLH 880
Query: 300 ANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMES 359
++L +E Q +F P K++++TNIAETS+TID + YVI G K K Y+P GMES
Sbjct: 881 SSLSSEEQQSVFLRPPAGVIKIIISTNIAETSVTIDDVVYVIDSGKMKEKRYDPSKGMES 940
Query: 360 LLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYH------------RIWMTILCQKYN 407
L +S+A+A QR G + R G CF L++ H+Y+ R+ + LC +
Sbjct: 941 LEDTFVSRANALQRKGRAGRVASGVCFHLFSSHHYNHQLIKQQLPEIQRVPLEQLCLRIK 1000
Query: 408 ELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPID 467
I +M S S V I+PP GAL +LT +G +A P+D
Sbjct: 1001 --ILEMFSAQSLHSVLSRLIEPPRTESLRASKLRLQDLGALTADEKLTPLGYHLASLPVD 1058
Query: 468 PKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIA 527
++ K ++ ++C D +TIAA L S F P DK+ A+ +++F +G+ D +A
Sbjct: 1059 VRIGKLMLFGTIFRCLDPALTIAASLAF-KSPFVSPWDKREEANKKKLDFAVGN-SDYLA 1116
Query: 528 LLRVYNCWR-----ECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARV 572
LL+ Y WR S +CREN++ ++ ++ Q L + +
Sbjct: 1117 LLQAYKGWRLSTKEGSQASYNYCRENFLSGRVLQEIASLKRQFTELLSDI 1166
Score = 288 (106.4 bits), Expect = 3.0e-64, Sum P(3) = 3.0e-64
Identities = 61/132 (46%), Positives = 88/132 (66%)
Query: 103 EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
+PR ++A+SVA RV++E ++G VGY IR E S T L Y T +LLR + + +L
Sbjct: 593 QPRRISAISVAERVAKERTERVGVTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDLTL 652
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFK 222
+ + +IVDE ERT +D L +LKD++ RPDL++++ SATL+AE FS YF S PI
Sbjct: 653 QGITHVIVDEVHERTEESDFLLLVLKDIMVQRPDLRIILMSATLNAELFSQYFHSCPIIN 712
Query: 223 IPGRRYPVELFY 234
IPGR +PV+ F+
Sbjct: 713 IPGRTFPVDQFF 724
Score = 100 (40.3 bits), Expect = 3.0e-64, Sum P(3) = 3.0e-64
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 56 MLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYEPRWVAAMSVAAR 115
ML E +K LP + E +L ++ + VL + G TG GKTTQIPQ++ + + + A
Sbjct: 530 MLHERQK-LPAWQERETILDLLTSHQVLVVSGMTGCGKTTQIPQFILDASLQGSPNAVAN 588
Query: 116 V 116
+
Sbjct: 589 I 589
>CGD|CAL0004556 [details] [associations]
symbol:orf19.2090 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0032040 "small-subunit
processome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 CGD:CAL0004556 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AACQ01000031
EMBL:AACQ01000030 KO:K14780 RefSeq:XP_719536.1 RefSeq:XP_719660.1
STRING:Q5ACX7 GeneID:3638741 GeneID:3638820 KEGG:cal:CaO19.2090
KEGG:cal:CaO19.9637 Uniprot:Q5ACX7
Length = 1263
Score = 377 (137.8 bits), Expect = 7.1e-64, Sum P(3) = 7.1e-64
Identities = 87/254 (34%), Positives = 139/254 (54%)
Query: 270 DEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAE 329
+E E EE ++ +++ L + P+Y+ LPT+ Q K+FE P +R ++ATN+AE
Sbjct: 748 EENEEEEEGFEESIDSKESEVGPLYVLPLYSLLPTKQQMKVFEDPPPGSRICIVATNVAE 807
Query: 330 TSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLY 389
TSLTI GI+YV+ G +K + YN + G++S V+ +SKASANQR G + RTGPG C+RLY
Sbjct: 808 TSLTIPGIRYVVDCGRSKERKYNQENGVQSFEVDWVSKASANQRAGRAGRTGPGHCYRLY 867
Query: 390 TLHNYHRIWMT-----ILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXX 444
+ + + IL + ++ M S+ + + NF F PP
Sbjct: 868 SSAVFEDFFPQFSVPEILRMPFESIVLSMKSMGIDQIANFPFPTPPDRFSLKKAEELLVI 927
Query: 445 XGALNKAG-QLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRP 503
GAL+K Q+T +G++M+ FP+ P+ +K ++ ++ +C II I + L VG+
Sbjct: 928 LGALDKEQKQITDLGKKMSLFPLSPRFAKILIIGNQQECLSYIIAIVSALSVGDPFIGEN 987
Query: 504 KDKQIYADNARMNF 517
+ D AR F
Sbjct: 988 ELVGNMNDEARREF 1001
Score = 261 (96.9 bits), Expect = 7.1e-64, Sum P(3) = 7.1e-64
Identities = 65/178 (36%), Positives = 100/178 (56%)
Query: 121 GVKLGHEVGYSIRFEDCTSDK-TVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLS 179
G ++G+++ + ++ + T LK+MTD +LLRE++ + L YS +I+DEA ER ++
Sbjct: 522 GHRVGYQIRFDTTIKNEGKENGTALKFMTDGVLLREMMTDFLLAKYSAIIIDEAHERNIN 581
Query: 180 TDNLFGLLKDLIN------------YRPDLKLLISSATLDAEKFSD---YFGSAP-IFKI 223
TD L G+L ++ Y+P LKL+I SATL FS+ F + P I +
Sbjct: 582 TDILIGMLTRVVKLRRKYHKENPQLYKP-LKLIIMSATLRVSDFSENPALFKTPPPIINV 640
Query: 224 PGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQ 281
R+YPV + + K DY+E A +IH P G IL+FLTGQ+EI + L+Q
Sbjct: 641 QARQYPVSIHFNKKTNYDYLEEAFKKTCKIHRKLPEGGILIFLTGQNEITTLVKKLRQ 698
Score = 219 (82.2 bits), Expect = 1.8e-59, Sum P(3) = 1.8e-59
Identities = 58/139 (41%), Positives = 83/139 (59%)
Query: 103 EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDK-----TVLKYMTDCMLLREIV 157
+PR VAA+S+A RV E+G GH VGY IRF+ ++ T LK+MTD +LLRE++
Sbjct: 501 QPRRVAAVSMAERVGSELGDH-GHRVGYQIRFDTTIKNEGKENGTALKFMTDGVLLREMM 559
Query: 158 IEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLIN------------YRPDLKLLISSAT 205
+ L YS +I+DEA ER ++TD L G+L ++ Y+P LKL+I SAT
Sbjct: 560 TDFLLAKYSAIIIDEAHERNINTDILIGMLTRVVKLRRKYHKENPQLYKP-LKLIIMSAT 618
Query: 206 LDAEKFSDYFGSAPIFKIP 224
L + SD+ + +FK P
Sbjct: 619 L---RVSDFSENPALFKTP 634
Score = 131 (51.2 bits), Expect = 7.1e-64, Sum P(3) = 7.1e-64
Identities = 33/97 (34%), Positives = 56/97 (57%)
Query: 9 KQQREKCTFEIEDKIVDFFSESVFDGDNFDEFESELPNKS-VVK-STLEMLQEERKTLPI 66
K++ K T ED VD S D + + E+ ++ VV+ + + +Q++R LP+
Sbjct: 392 KKKYSKQTVRDED--VDHSS----DEEGYIPINKEMQRRAFVVEVNRTDSIQQQRALLPV 445
Query: 67 YPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE 103
+ +++AV + + + GETGSGKTTQ+PQ+LYE
Sbjct: 446 FAEEHRIMEAVYHHDCIILCGETGSGKTTQVPQFLYE 482
Score = 37 (18.1 bits), Expect = 4.9e-54, Sum P(3) = 4.9e-54
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 6 AWEK--QQREKCTFEIEDKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLE 55
+W K ++ EK + ED D F+ S D + D ++ N S + T+E
Sbjct: 239 SWRKRVEEEEKKRLKKEDD--DDFASSSEDEEESDNSNADDMNTS--EETVE 286
Score = 37 (18.1 bits), Expect = 1.8e-40, Sum P(3) = 1.8e-40
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 98 PQYLYEPRWVAAMSVAARVS 117
PQ LY+P + MS RVS
Sbjct: 604 PQ-LYKPLKLIIMSATLRVS 622
>UNIPROTKB|H9KZI9 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00575 PROSITE:PS00690
PROSITE:PS50126 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 EMBL:AADN02006936
Ensembl:ENSGALT00000013764 OMA:CRERERG Uniprot:H9KZI9
Length = 692
Score = 650 (233.9 bits), Expect = 9.7e-64, P = 9.7e-64
Identities = 133/237 (56%), Positives = 171/237 (72%)
Query: 46 NK-SVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE- 103
NK S K T + E+R++LPI+ E+L+QAV +L ++GETGSGKTTQI QYL E
Sbjct: 456 NKASYGKKTQLSIIEQRESLPIFRLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEA 515
Query: 104 ------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCM 151
PR VAAMSVA RVS+E G LG EVGY+IRFEDCTS +TV+KYMTD M
Sbjct: 516 GYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGM 575
Query: 152 LLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKF 211
LLRE +I+P L Y+++++DEA ERT+ TD LFGLLK + R D+KL+++SATLDA KF
Sbjct: 576 LLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKF 635
Query: 212 SDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTG 268
S YF APIF IPGR YPVE+ YTK PE DY++A+++T +QIH+ EP G+ +V + G
Sbjct: 636 SQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGEWIVMIHG 692
>UNIPROTKB|F1N1A2 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RAYKGWQ EMBL:DAAA02030601
EMBL:DAAA02030599 EMBL:DAAA02030600 IPI:IPI00709831
Ensembl:ENSBTAT00000019540 ArrayExpress:F1N1A2 Uniprot:F1N1A2
Length = 1382
Score = 371 (135.7 bits), Expect = 6.0e-63, Sum P(3) = 6.0e-63
Identities = 111/351 (31%), Positives = 175/351 (49%)
Query: 240 VDYIEAA---IVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIIC 296
++ IEA IV + +P G ILVFL G EI+ E L+ + + +I
Sbjct: 821 LELIEALLEWIVDGKHSYPPDP-GAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIH 879
Query: 297 PIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTG 356
P++++L +E Q +F P K++++TNIAETS+TID + YVI G K K Y+ G
Sbjct: 880 PLHSSLSSEEQQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKG 939
Query: 357 MESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNY-HRIWMTIL--CQKY--NELIW 411
MESL +S+A+A QR G + R G CF L+T H++ H++ L Q+ +L
Sbjct: 940 MESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCL 999
Query: 412 --KMLSLFS--NVLVNFD-FIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPI 466
K+L +FS N+ F I+PP GAL LT +G +A P+
Sbjct: 1000 RIKILEMFSTHNLQSVFARLIEPPHADSLRASKIRLRDLGALTPDETLTPLGYHLASLPV 1059
Query: 467 DPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRI 526
D ++ K ++ ++C D +TIAA L S F P DK+ A+ ++ F + D +
Sbjct: 1060 DVRIGKLMLFGSIFRCLDPALTIAASLAF-KSPFVSPWDKKEEANQKKLEFAFAN-SDYL 1117
Query: 527 ALLRVYNCW----RE-CNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARV 572
ALLR Y W +E S +CR+N++ ++ ++ Q L + +
Sbjct: 1118 ALLRAYKGWQLSMKEGMRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDI 1168
Score = 288 (106.4 bits), Expect = 6.0e-63, Sum P(3) = 6.0e-63
Identities = 59/132 (44%), Positives = 88/132 (66%)
Query: 103 EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
+PR ++A+SVA RV++E ++G VGY IR E S T L Y T +LLR + + +L
Sbjct: 593 QPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDTAL 652
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFK 222
+ + +IVDE ERT +D L +LKD++ RP L++++ SATL+AE FS+YF S P+
Sbjct: 653 QGVTHIIVDEVHERTEESDFLLLVLKDIVLQRPTLQVILMSATLNAELFSEYFNSCPVIT 712
Query: 223 IPGRRYPVELFY 234
IPGR +PV+ F+
Sbjct: 713 IPGRTFPVDQFF 724
Score = 105 (42.0 bits), Expect = 6.0e-63, Sum P(3) = 6.0e-63
Identities = 20/45 (44%), Positives = 32/45 (71%)
Query: 59 EERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE 103
+ER++LP + E +L+ +S + VL + G TG GKTTQIPQ++ +
Sbjct: 532 QERQSLPAWEERENILKLLSKHQVLVVSGMTGCGKTTQIPQFILD 576
>TAIR|locus:2038796 [details] [associations]
symbol:AT2G01130 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002685 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14442 IPI:IPI00528464
RefSeq:NP_178223.2 UniGene:At.42514 ProteinModelPortal:F4IM84
SMR:F4IM84 PRIDE:F4IM84 EnsemblPlants:AT2G01130.1 GeneID:814642
KEGG:ath:AT2G01130 OMA:PSWISKV Uniprot:F4IM84
Length = 1113
Score = 372 (136.0 bits), Expect = 7.7e-63, Sum P(3) = 7.7e-63
Identities = 104/322 (32%), Positives = 160/322 (49%)
Query: 256 NEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTP 315
NE G IL+FLTG D+I +E L+ + L+ C + ++ T Q IFE
Sbjct: 495 NEGPGGILIFLTGWDDISSLKEKLQIHPIFGNPDLVMLLAC--HGSMETFEQRLIFEEPA 552
Query: 316 ERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTG 375
RK+VLATNIAETS+TI+ + +VI G AK SY+ LL + ISK SA QR G
Sbjct: 553 SGVRKIVLATNIAETSITINDVAFVIDCGKAKETSYDALNNTPCLLPSWISKVSAQQRRG 612
Query: 376 LSERTGPGKCFRLYTLHNYHRI----WMTILCQKYNELIWKMLSLFSNVLVNF--DFIDP 429
+ R PG+C+ LY Y IL + L ++ SL + F +
Sbjct: 613 RAGRVRPGQCYHLYPKCVYDAFAEYQLPEILRTPLHSLCLQIKSLNLGSISEFLSRALQS 672
Query: 430 PXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITI 489
P GAL++ LT +GR +++ P++PKL K ++ C D I+T+
Sbjct: 673 PELLAVQKAIAFLKIIGALDENEDLTTLGRYLSKLPMEPKLGKMLILGAILGCLDPILTV 732
Query: 490 AAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYST---EWCR 546
AA L V + F P+DK+ A+ A+ F D D +AL+R Y W++ + ++C
Sbjct: 733 AAGLSVRDP-FLTPQDKKDLAEAAKSQFSR-DHSDHLALVRAYEGWKKAEEESAVYDYCW 790
Query: 547 ENYIQVSSMKRARDIRDQLEGL 568
+N++ + S++ +R + L
Sbjct: 791 KNFLSIQSLRAIDSLRKEFFSL 812
Score = 282 (104.3 bits), Expect = 7.7e-63, Sum P(3) = 7.7e-63
Identities = 59/128 (46%), Positives = 84/128 (65%)
Query: 103 EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
+PR ++AMSV+ RV+ E G +LG VGY +R E T L + T +LLR ++++ +L
Sbjct: 276 QPRRISAMSVSERVAYERGEQLGESVGYKVRLEGVKGRDTRLLFCTTGILLRRLLVDRNL 335
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFK 222
+ +IVDE ER ++ D L +LKDL++ R +LKL++ SATLDAE FS YFG A +
Sbjct: 336 RGVTHVIVDEIHERGMNEDFLLIILKDLLSRRSELKLILMSATLDAELFSSYFGGAGVIY 395
Query: 223 IPGRRYPV 230
IPG YPV
Sbjct: 396 IPGFTYPV 403
Score = 104 (41.7 bits), Expect = 7.7e-63, Sum P(3) = 7.7e-63
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 55 EMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE 103
+ + + R +LP + +L A+S V+ I GETG GKTTQIPQ++ E
Sbjct: 211 QRMLDSRTSLPAFKQRHSVLTAISQNQVIVISGETGCGKTTQIPQFILE 259
>FB|FBgn0052533 [details] [associations]
symbol:CG32533 species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:AE014298 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
OMA:DSDQVFH GeneTree:ENSGT00700000104421 EMBL:AY058623
RefSeq:NP_728244.1 UniGene:Dm.4145 SMR:Q9VWI5
EnsemblMetazoa:FBtr0074786 GeneID:32933 KEGG:dme:Dmel_CG32533
UCSC:CG32533-RA FlyBase:FBgn0052533 InParanoid:Q9VWI5
OrthoDB:EOG4V9S5G GenomeRNAi:32933 NextBio:781096 Uniprot:Q9VWI5
Length = 1139
Score = 375 (137.1 bits), Expect = 9.6e-63, Sum P(2) = 9.6e-63
Identities = 106/377 (28%), Positives = 186/377 (49%)
Query: 218 APIFKIPGRRYPVELFYTKAPEVDY--------------IEAA-IVTALQ-IHVNEPT-- 259
A + ++PGR +P++L Y P ++ I+ A V L I PT
Sbjct: 312 ARLVQVPGRLFPIKLRYLPPPALELKAGQATSKRSQRNRIDPAPFVQVLSLIDQQYPTSE 371
Query: 260 -GDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERA 318
GD+L+F++G +EIE E + + T+ ++ P+++ Q+K+F+ PE
Sbjct: 372 RGDVLIFVSGVNEIESVVEAVHE----YATEQTHWLVLPLHSGQAIADQSKVFDYAPEGM 427
Query: 319 RKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSE 378
RK +++TNIAETSLT+DG+++V+ G K +++ + L +SK+SA+QR G +
Sbjct: 428 RKCIVSTNIAETSLTVDGVRFVVDSGKVKEMNFDATCKGQRLKEFWVSKSSADQRKGRAG 487
Query: 379 RTGPGKCFRLYTLHNYHRI--WMT--ILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXX 434
RTGPG CFRLYT Y+ + T I + ++ +M+S+ + F FI+ P
Sbjct: 488 RTGPGVCFRLYTAEQYNAFEAYPTPEIYRVPLDTMLLQMVSMGLPDVRAFPFIEAPETER 547
Query: 435 XXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLF 494
AL+ ++T +GR +A P++ + K ++ + ++++T+AAML
Sbjct: 548 IEQTILALKQHCALSVEEKITPLGRSLANLPVELSIGKMLLMGSVFPEVEQLLTLAAMLS 607
Query: 495 VGNSIFYRPK-DKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNY----STEWCRENY 549
V N + R D++ + + D GD L+R+YN W + + +WCR
Sbjct: 608 VQNPLTNRAHTDQRCVRERESLE---SDHGDLFTLVRLYNVWVQLKMRRDGTRQWCRRLG 664
Query: 550 IQVSSMKRARDIRDQLE 566
I+ +R Q +
Sbjct: 665 IEEQRFYEVTKLRQQFQ 681
Score = 341 (125.1 bits), Expect = 9.6e-63, Sum P(2) = 9.6e-63
Identities = 75/209 (35%), Positives = 125/209 (59%)
Query: 54 LEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE---------- 103
+ L++ ++ LPI F ++L +A+ V+ + G+TG GK+TQ+PQYLY+
Sbjct: 136 IRKLRQTQRNLPIARFRKDLREALDTSRVVIVAGDTGCGKSTQVPQYLYDFGYRSIACTQ 195
Query: 104 PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLE 163
PR +A +S+ RV+ E+ G V + IRFE + T + ++T+ +LLR++ + +L+
Sbjct: 196 PRRLACVSLCKRVAHELLDDYGSRVAFQIRFERSRTKLTNILFITEGLLLRQLAVAANLD 255
Query: 164 SYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGS--APIF 221
Y LI+DE ER L D L G+ K L+ RP LKL++ SAT++ E F YFG A +
Sbjct: 256 QYDALILDEIHERNLFGDFLLGVTKCLLRARPQLKLILMSATINVELFHGYFGEEGARLV 315
Query: 222 KIPGRRYPVELFYTKAPEVDYIEAAIVTA 250
++PGR +P++L Y P ++ ++A T+
Sbjct: 316 QVPGRLFPIKLRYLPPPALE-LKAGQATS 343
>GENEDB_PFALCIPARUM|PF08_0042 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase
prh1, putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 316 (116.3 bits), Expect = 2.1e-62, Sum P(5) = 2.1e-62
Identities = 82/227 (36%), Positives = 123/227 (54%)
Query: 282 RTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVI 341
+T + KI + I +Y++LP + Q IFEP P RKV+L+TNIAETS+TI IKYVI
Sbjct: 389 KTEIMPDKIYNMKILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVI 448
Query: 342 HPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHR----- 396
G K+K ++ G L V ISK SA QR+G + R PG+ +R+YT Y
Sbjct: 449 DSGKVKIKYFDVNRGSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEEYENMNPFL 508
Query: 397 ---IWMTILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQ 453
I+ + L Q Y EL K +++ +N L F+F + P A++
Sbjct: 509 IPEIFRSDLTQIYLEL--KAMNI-NNPL-EFNFPENPRKELFVHSAKMLFKINAIDMNNN 564
Query: 454 LTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIF 500
LT +G+++ FP++P + ++ ++ C DEI TI A+L +SIF
Sbjct: 565 LTDLGKKLCLFPLNPIYANILLCSIEFNCIDEIATIVALLNC-DSIF 610
Score = 315 (115.9 bits), Expect = 2.1e-62, Sum P(5) = 2.1e-62
Identities = 65/152 (42%), Positives = 100/152 (65%)
Query: 104 PRWVAAMSVAARVSQEMGV-KLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
PR VA ++VA RVS+EM +G+ VGY+IRF++ SDKT +K++TD +L+REI+ +P L
Sbjct: 77 PRRVATITVAERVSKEMKRGDIGNYVGYTIRFKNVCSDKTRIKFVTDGILIREIMNDPLL 136
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFK 222
+ Y LI+DE ER++ TD L G K L+ R +K+++ SAT D F+ +F + PI
Sbjct: 137 KKYKFLILDEIHERSIRTDVLLGYTKILLQKRKKIKIILMSATFDINIFNQFFNNPPIIT 196
Query: 223 IPGRRYPVELFYTKAPEVDYIEAAIVTALQIH 254
IP + + + ++Y + DYI + + T LQIH
Sbjct: 197 IPHKLHKITIYYPRRNIEDYILSVVSTILQIH 228
Score = 86 (35.3 bits), Expect = 2.1e-62, Sum P(5) = 2.1e-62
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 62 KTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE 103
+ LPI + E+ + + ++ I GETG GKTTQ+PQ + E
Sbjct: 2 RELPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQIINE 43
Score = 71 (30.1 bits), Expect = 2.1e-62, Sum P(5) = 2.1e-62
Identities = 14/25 (56%), Positives = 19/25 (76%)
Query: 260 GDILVFLTGQDEIERAEEILKQRTR 284
GDILVFL GQ+EIE +LK++ +
Sbjct: 317 GDILVFLPGQEEIEMVNIMLKEKLK 341
Score = 47 (21.6 bits), Expect = 2.1e-62, Sum P(5) = 2.1e-62
Identities = 15/63 (23%), Positives = 28/63 (44%)
Query: 505 DKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTE--WCRENYIQVSSMKRARDIR 562
DK + AR D GD + LL ++ W+E + + +C + +++ I+
Sbjct: 696 DKNKLINVARRKLIHPD-GDHLTLLHIFYLWQEADIKEKKHFCNIYALNNEILQQVEKIK 754
Query: 563 DQL 565
QL
Sbjct: 755 IQL 757
>UNIPROTKB|Q8IB47 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase prh1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 316 (116.3 bits), Expect = 2.1e-62, Sum P(5) = 2.1e-62
Identities = 82/227 (36%), Positives = 123/227 (54%)
Query: 282 RTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVI 341
+T + KI + I +Y++LP + Q IFEP P RKV+L+TNIAETS+TI IKYVI
Sbjct: 389 KTEIMPDKIYNMKILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVI 448
Query: 342 HPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHR----- 396
G K+K ++ G L V ISK SA QR+G + R PG+ +R+YT Y
Sbjct: 449 DSGKVKIKYFDVNRGSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEEYENMNPFL 508
Query: 397 ---IWMTILCQKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQ 453
I+ + L Q Y EL K +++ +N L F+F + P A++
Sbjct: 509 IPEIFRSDLTQIYLEL--KAMNI-NNPL-EFNFPENPRKELFVHSAKMLFKINAIDMNNN 564
Query: 454 LTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIF 500
LT +G+++ FP++P + ++ ++ C DEI TI A+L +SIF
Sbjct: 565 LTDLGKKLCLFPLNPIYANILLCSIEFNCIDEIATIVALLNC-DSIF 610
Score = 315 (115.9 bits), Expect = 2.1e-62, Sum P(5) = 2.1e-62
Identities = 65/152 (42%), Positives = 100/152 (65%)
Query: 104 PRWVAAMSVAARVSQEMGV-KLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
PR VA ++VA RVS+EM +G+ VGY+IRF++ SDKT +K++TD +L+REI+ +P L
Sbjct: 77 PRRVATITVAERVSKEMKRGDIGNYVGYTIRFKNVCSDKTRIKFVTDGILIREIMNDPLL 136
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFK 222
+ Y LI+DE ER++ TD L G K L+ R +K+++ SAT D F+ +F + PI
Sbjct: 137 KKYKFLILDEIHERSIRTDVLLGYTKILLQKRKKIKIILMSATFDINIFNQFFNNPPIIT 196
Query: 223 IPGRRYPVELFYTKAPEVDYIEAAIVTALQIH 254
IP + + + ++Y + DYI + + T LQIH
Sbjct: 197 IPHKLHKITIYYPRRNIEDYILSVVSTILQIH 228
Score = 86 (35.3 bits), Expect = 2.1e-62, Sum P(5) = 2.1e-62
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 62 KTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE 103
+ LPI + E+ + + ++ I GETG GKTTQ+PQ + E
Sbjct: 2 RELPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQIINE 43
Score = 71 (30.1 bits), Expect = 2.1e-62, Sum P(5) = 2.1e-62
Identities = 14/25 (56%), Positives = 19/25 (76%)
Query: 260 GDILVFLTGQDEIERAEEILKQRTR 284
GDILVFL GQ+EIE +LK++ +
Sbjct: 317 GDILVFLPGQEEIEMVNIMLKEKLK 341
Score = 47 (21.6 bits), Expect = 2.1e-62, Sum P(5) = 2.1e-62
Identities = 15/63 (23%), Positives = 28/63 (44%)
Query: 505 DKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTE--WCRENYIQVSSMKRARDIR 562
DK + AR D GD + LL ++ W+E + + +C + +++ I+
Sbjct: 696 DKNKLINVARRKLIHPD-GDHLTLLHIFYLWQEADIKEKKHFCNIYALNNEILQQVEKIK 754
Query: 563 DQL 565
QL
Sbjct: 755 IQL 757
>ZFIN|ZDB-GENE-030131-4078 [details] [associations]
symbol:dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box
polypeptide 57" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4078 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257
EMBL:BX248102 EMBL:AL935288 EMBL:CT998560 IPI:IPI00513320
Ensembl:ENSDART00000080351 ArrayExpress:F1QCB1 Bgee:F1QCB1
Uniprot:F1QCB1
Length = 1430
Score = 360 (131.8 bits), Expect = 9.4e-62, Sum P(3) = 9.4e-62
Identities = 102/350 (29%), Positives = 172/350 (49%)
Query: 240 VDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIY 299
+D +E+ + + + P G +LVFL G EI++ E L+ + ++ P++
Sbjct: 871 MDLVESLLEWIVDGDHSYPPGAVLVFLPGLAEIKQLYEQLQSNRMFNNRRTNRCVVYPLH 930
Query: 300 ANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMES 359
++L E Q +F K++++TNIAETS+TID + YVI G K K Y+ MES
Sbjct: 931 SSLSNEEQQAVFTRPQNGVTKIIISTNIAETSVTIDDVVYVIDSGRMKEKRYDASRSMES 990
Query: 360 LLVNPISKASANQRTGLSERTGPGKCFRLYTLHNY-HRIWMTIL--CQKY--NELIW--K 412
L +S+A+A QR G + R G CF L+T H + H + L Q+ +L K
Sbjct: 991 LEDVWVSRANALQRKGRAGRVASGVCFHLFTSHRFEHHLSQQQLPEIQRVPLEQLCLRVK 1050
Query: 413 MLSLFSNVLVNFDF---IDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPK 469
+L +F+ ++ F I+PP GAL LT +G +A P+D +
Sbjct: 1051 VLEVFAERPLDSVFSQLIEPPTEGSLEAAKQRLCALGALTDEESLTPLGWHLACLPVDVR 1110
Query: 470 LSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALL 529
+ K ++ ++C D +TIAA L S F P DK+ A+ ++ F L + D +AL+
Sbjct: 1111 IGKLMLLGAIFRCLDPALTIAASLAF-KSPFVSPWDKREEANEKKLAFSLAN-SDHLALM 1168
Query: 530 RVYNCWRECNYST-------EWCRENYIQVSSMKRARDIRDQLEGLFARV 572
+ Y W CN + ++CREN++ + ++ ++ Q L + +
Sbjct: 1169 QAYKGW--CNAAQSGFKAGYQYCRENFLSIRGLQEIACLKRQFAELLSDI 1216
Score = 294 (108.6 bits), Expect = 9.4e-62, Sum P(3) = 9.4e-62
Identities = 63/132 (47%), Positives = 84/132 (63%)
Query: 103 EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
+PR ++A++VA RV+QE LGH GY IR E S T L + T +LLR + +P L
Sbjct: 639 QPRRISAIAVATRVAQERAEALGHSTGYQIRLETVRSSITRLMFCTTGVLLRRLEGDPEL 698
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFK 222
+ +IVDE ERT +D L +LKDLI R DLK+++ SATL+AE FS YF + P
Sbjct: 699 SGVTHVIVDEVHERTEESDFLLLVLKDLIVKRTDLKVIMMSATLNAELFSQYFNNCPCIH 758
Query: 223 IPGRRYPVELFY 234
IPGR +PVE F+
Sbjct: 759 IPGRTFPVEQFF 770
Score = 102 (41.0 bits), Expect = 9.4e-62, Sum P(3) = 9.4e-62
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 57 LQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE 103
+QE+R+ LP + E +L+ + VL I G TG GKTTQIPQ++ +
Sbjct: 575 MQEQRQKLPAWQKREAILECLVKNQVLVISGMTGCGKTTQIPQFILD 621
Score = 37 (18.1 bits), Expect = 1.3e-28, Sum P(2) = 1.3e-28
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 207 DAEKFSDYFGSAPIFKIPGRR 227
D + FS FG + FK P R
Sbjct: 45 DGDDFSLDFGPSRSFKPPSSR 65
>UNIPROTKB|J3KR71 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC008754 HGNC:HGNC:16719
ChiTaRS:DHX34 ProteinModelPortal:J3KR71 Ensembl:ENST00000466298
Uniprot:J3KR71
Length = 576
Score = 394 (143.8 bits), Expect = 1.0e-61, Sum P(2) = 1.0e-61
Identities = 85/197 (43%), Positives = 120/197 (60%)
Query: 54 LEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLY----------E 103
L LQ ER LPI + +LQ + + V+ + G+TG GK+TQ+PQYL +
Sbjct: 152 LAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSHVACTQ 211
Query: 104 PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLE 163
PR +A +S+A RV E + G +VGY IRFE S T + ++T +LLR+I EPSL
Sbjct: 212 PRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSLP 271
Query: 164 SYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKI 223
Y VLIVDE ER L D L G+L+ L+ RPDLK+++ SAT++ FS YF +AP+ ++
Sbjct: 272 QYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINISLFSSYFSNAPVVQV 331
Query: 224 PGRRYPVELFYTKAPEV 240
PGR +P+ +F P V
Sbjct: 332 PGRLFPITVFDVAPPGV 348
Score = 285 (105.4 bits), Expect = 1.0e-61, Sum P(2) = 1.0e-61
Identities = 71/197 (36%), Positives = 104/197 (52%)
Query: 310 IFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKAS 369
+F+ P RK +L+TNIAETS+TIDGI++V+ G K SY+P+ ++ L IS+AS
Sbjct: 340 VFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQAS 399
Query: 370 ANQRTGLSERTGPGKCFRLYTLHNYHRIWM----TILCQKYNELIWKMLSLFSNVLVNFD 425
A QR G + RTGPG CFRLY +Y I + L+ +M S+ F
Sbjct: 400 AEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDSLVLQMKSMSVGDPRTFP 459
Query: 426 FIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDE 485
FI+PP GAL+ + LT +G +A+ P+D + K ++ + +
Sbjct: 460 FIEPPPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEP 519
Query: 486 IITIAAMLFVGNSIFYR 502
++TIAA L V S F R
Sbjct: 520 VLTIAAALSV-QSPFTR 535
>UNIPROTKB|F1M8G5 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
RGD:1310340 NextBio:689608 IPI:IPI00391644
Ensembl:ENSRNOT00000037714 ArrayExpress:F1M8G5 Uniprot:F1M8G5
Length = 1338
Score = 379 (138.5 bits), Expect = 1.0e-61, Sum P(3) = 1.0e-61
Identities = 108/348 (31%), Positives = 174/348 (50%)
Query: 240 VDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIY 299
++ IEA + + + P G ILVFL G EI+ E L+ + + +I P++
Sbjct: 780 LELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLH 839
Query: 300 ANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMES 359
++L +E Q +F P K++++TNIAETS+TID + YVI G K K Y+ GMES
Sbjct: 840 SSLSSEEQQAVFVKPPLGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMES 899
Query: 360 LLVNPISKASANQRTGLSERTGPGKCFRLYTLHNY-HRIWMTIL--CQKY--NELIW--K 412
L +S+A+A QR G + R G CF L+T H+Y H++ L Q+ +L K
Sbjct: 900 LEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIK 959
Query: 413 MLSLFS--NVLVNFD-FIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPK 469
+L +FS N+ F I+PP GAL +LT +G +A P+D +
Sbjct: 960 ILEMFSTHNLQSVFSRLIEPPHVDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVR 1019
Query: 470 LSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALL 529
+ K ++ ++C D +TIAA L S F P DK+ A+ ++ F + D +ALL
Sbjct: 1020 IGKLMLLGSIFRCLDPALTIAASLAF-KSPFVSPWDKKEEANQKKLEFAFAN-SDYLALL 1077
Query: 530 RVYNCWR-----ECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARV 572
Y W+ S +CR+N++ +++ ++ Q L + +
Sbjct: 1078 CAYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKRQFTELLSDI 1125
Score = 270 (100.1 bits), Expect = 1.0e-61, Sum P(3) = 1.0e-61
Identities = 57/132 (43%), Positives = 84/132 (63%)
Query: 103 EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
+PR ++A+SVA RV++E ++G VGY IR E S T L Y T +LLR + + +L
Sbjct: 551 QPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDATL 610
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFK 222
+ + +IVDE ERT +D L +LKD++ R L++++ SATLDA FS YF P+
Sbjct: 611 QGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSATLDAGLFSKYFSYCPVIT 670
Query: 223 IPGRRYPVELFY 234
IPGR +PV+ F+
Sbjct: 671 IPGRAFPVDQFF 682
Score = 100 (40.3 bits), Expect = 1.0e-61, Sum P(3) = 1.0e-61
Identities = 20/45 (44%), Positives = 31/45 (68%)
Query: 59 EERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE 103
+ER+ LP + E +L+ +S + V+ I G TG GKTTQIPQ++ +
Sbjct: 490 QERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILD 534
>UNIPROTKB|F1LSC4 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026 OMA:RAYKGWQ
IPI:IPI00369334 RefSeq:NP_001178836.1 UniGene:Rn.15951
Ensembl:ENSRNOT00000037705 GeneID:366532 KEGG:rno:366532
RGD:1310340 NextBio:689608 ArrayExpress:F1LSC4 Uniprot:F1LSC4
Length = 1391
Score = 379 (138.5 bits), Expect = 1.3e-61, Sum P(3) = 1.3e-61
Identities = 108/348 (31%), Positives = 174/348 (50%)
Query: 240 VDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIY 299
++ IEA + + + P G ILVFL G EI+ E L+ + + +I P++
Sbjct: 833 LELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLH 892
Query: 300 ANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMES 359
++L +E Q +F P K++++TNIAETS+TID + YVI G K K Y+ GMES
Sbjct: 893 SSLSSEEQQAVFVKPPLGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMES 952
Query: 360 LLVNPISKASANQRTGLSERTGPGKCFRLYTLHNY-HRIWMTIL--CQKY--NELIW--K 412
L +S+A+A QR G + R G CF L+T H+Y H++ L Q+ +L K
Sbjct: 953 LEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIK 1012
Query: 413 MLSLFS--NVLVNFD-FIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPK 469
+L +FS N+ F I+PP GAL +LT +G +A P+D +
Sbjct: 1013 ILEMFSTHNLQSVFSRLIEPPHVDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVR 1072
Query: 470 LSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALL 529
+ K ++ ++C D +TIAA L S F P DK+ A+ ++ F + D +ALL
Sbjct: 1073 IGKLMLLGSIFRCLDPALTIAASLAF-KSPFVSPWDKKEEANQKKLEFAFAN-SDYLALL 1130
Query: 530 RVYNCWR-----ECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARV 572
Y W+ S +CR+N++ +++ ++ Q L + +
Sbjct: 1131 CAYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKRQFTELLSDI 1178
Score = 270 (100.1 bits), Expect = 1.3e-61, Sum P(3) = 1.3e-61
Identities = 57/132 (43%), Positives = 84/132 (63%)
Query: 103 EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
+PR ++A+SVA RV++E ++G VGY IR E S T L Y T +LLR + + +L
Sbjct: 604 QPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDATL 663
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFK 222
+ + +IVDE ERT +D L +LKD++ R L++++ SATLDA FS YF P+
Sbjct: 664 QGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSATLDAGLFSKYFSYCPVIT 723
Query: 223 IPGRRYPVELFY 234
IPGR +PV+ F+
Sbjct: 724 IPGRAFPVDQFF 735
Score = 100 (40.3 bits), Expect = 1.3e-61, Sum P(3) = 1.3e-61
Identities = 20/45 (44%), Positives = 31/45 (68%)
Query: 59 EERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE 103
+ER+ LP + E +L+ +S + V+ I G TG GKTTQIPQ++ +
Sbjct: 543 QERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILD 587
>UNIPROTKB|E1C9C2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 OMA:AKLQPRT EMBL:AADN02034854
IPI:IPI00601367 Ensembl:ENSGALT00000004688 Uniprot:E1C9C2
Length = 1145
Score = 408 (148.7 bits), Expect = 1.9e-61, Sum P(2) = 1.9e-61
Identities = 100/240 (41%), Positives = 145/240 (60%)
Query: 57 LQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------------- 103
+QE R LPI + +++A++ P++ I GETGSGKTTQ+PQ+LYE
Sbjct: 235 IQEARLKLPILAEEQVIMEAINENPIVVICGETGSGKTTQVPQFLYEAGYTSSNGIIGIT 294
Query: 104 -PRWVAAMSVAARVSQEMGVKLGHEV-GYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPS 161
PR VAA+S++ RV++EM L H V Y IR+E T+D+T +K+MTD +LL+E+ +
Sbjct: 295 EPRRVAAVSMSQRVAKEMN--LSHRVVSYQIRYEGNTTDETQIKFMTDGVLLKEVQKDFL 352
Query: 162 LESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPD----LKLLISSATLDAEKFSD---- 213
L Y V+I+DEA ER++ TD L GLL ++ R LKL+I SATL E F++
Sbjct: 353 LSKYKVIIIDEAHERSMYTDILIGLLSRIVPLREKKGLPLKLIIMSATLRVEDFTENTRL 412
Query: 214 YFGSAPIFKIPGRRYPVEL-FYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEI 272
+ G+ P+ ++ R++PV + F K P DY +IH P+G ILVFLTGQ E+
Sbjct: 413 FAGTPPVLQVDARQFPVTVHFNKKTPLDDYSGECFRKVCKIHRMLPSGGILVFLTGQAEV 472
Score = 283 (104.7 bits), Expect = 1.9e-61, Sum P(2) = 1.9e-61
Identities = 70/183 (38%), Positives = 97/183 (53%)
Query: 293 LIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYN 352
L + P+Y+ L E QAK+F P P R V+ATN+AETSLTI GIKYV+ G K + Y+
Sbjct: 577 LYVLPLYSLLAPEKQAKVFRPPPPGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRFYD 636
Query: 353 PKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYT---LHNYHRIWMTILCQK-YNE 408
TG+ S V IS+ASANQR G + RT PG C+RLY+ ++ + + ++ +
Sbjct: 637 KITGVSSFRVTWISQASANQRAGRAGRTEPGHCYRLYSSAVFMDFEKFSAPEITKRPVED 696
Query: 409 LIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMA---EFP 465
LI +M +L ++NF F PP GAL + R+ Q A P
Sbjct: 697 LILQMKALNIEKVINFPFPTPPPTEALAAAEELLIALGALKEPPMTGRLKEQQAAKLSCP 756
Query: 466 IDP 468
I P
Sbjct: 757 ISP 759
Score = 91 (37.1 bits), Expect = 2.9e-41, Sum P(2) = 2.9e-41
Identities = 46/203 (22%), Positives = 76/203 (37%)
Query: 408 ELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNK---AGQLTR-------- 456
+LI +M +L ++NF F PP GAL + G+L
Sbjct: 696 DLILQMKALNIEKVINFPFPTPPPTEALAAAEELLIALGALKEPPMTGRLKEQQAAKLSC 755
Query: 457 ----VGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSI--FYRPKDKQ--- 507
+GR MA FP+ P+ +K + ++ C ITI + + V F RP +
Sbjct: 756 PISPLGRVMATFPVAPRYAKMLALSRQHDCLPYTITIVSAMTVRELFEEFDRPAASEEET 815
Query: 508 --IYADNARM---------NFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMK 556
+ R+ L +GD + +L + ++C EN ++ +M
Sbjct: 816 VKLKGKKGRLVQMQRIWAGQGSLQKLGDLMVMLGAVGACEYSGCTPKFCEENGLRYKAML 875
Query: 557 RARDIRDQLEGLFARVEIDTSIY 579
R +R QL V D +Y
Sbjct: 876 EIRRLRGQLTTAVNSVCTDAGLY 898
Score = 50 (22.7 bits), Expect = 2.2e-21, Sum P(2) = 2.2e-21
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 161 SLESYSVLIVDEAQE-RTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAP 219
+L++Y+V+ VDE E R TD+ D+ DL L + E+ SD S P
Sbjct: 527 NLDNYAVVPVDEGDEDRDAETDD------DIAGSDVDLDL--GDGDSEEEEKSD--SSLP 576
Query: 220 IFKIP 224
++ +P
Sbjct: 577 LYVLP 581
>MGI|MGI:2147067 [details] [associations]
symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
MGI:MGI:2147067 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 HOVERGEN:HBG080658 KO:K13026
OMA:RAYKGWQ OrthoDB:EOG4ZS929 EMBL:AK035344 EMBL:AK053628
EMBL:AK162192 EMBL:BC026474 EMBL:BC062952 EMBL:BC065169
EMBL:BC066091 IPI:IPI00420351 IPI:IPI00453609 IPI:IPI00752611
IPI:IPI00753147 IPI:IPI00755243 RefSeq:NP_001157231.1
RefSeq:NP_945180.2 UniGene:Mm.12412 ProteinModelPortal:Q6P5D3
SMR:Q6P5D3 PhosphoSite:Q6P5D3 PaxDb:Q6P5D3 PRIDE:Q6P5D3
Ensembl:ENSMUST00000038166 Ensembl:ENSMUST00000086555 GeneID:106794
KEGG:mmu:106794 UCSC:uc008dqx.2 UCSC:uc008dqy.2 UCSC:uc008dqz.2
UCSC:uc008dra.2 UCSC:uc008drb.1 InParanoid:Q6P5D3 NextBio:358388
Bgee:Q6P5D3 CleanEx:MM_DHX57 Genevestigator:Q6P5D3
GermOnline:ENSMUSG00000035051 Uniprot:Q6P5D3
Length = 1388
Score = 376 (137.4 bits), Expect = 3.2e-61, Sum P(3) = 3.2e-61
Identities = 104/330 (31%), Positives = 166/330 (50%)
Query: 258 PTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPER 317
P G +LVFL G EI+ E L+ + + +I P++++L +E Q +F P
Sbjct: 848 PPGAVLVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPMG 907
Query: 318 ARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLS 377
K++++TNIAETS+TID + YVI G K K Y+ GMESL +S+A+A QR G +
Sbjct: 908 VTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRA 967
Query: 378 ERTGPGKCFRLYTLHNY-HRIWMTIL--CQKY--NELIW--KMLSLFS--NVLVNFD-FI 427
R G CF L+T H+Y H++ L Q+ +L K+L +FS N+ F I
Sbjct: 968 GRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLI 1027
Query: 428 DPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEII 487
+PP GAL +LT +G +A P+D ++ K ++ ++C D +
Sbjct: 1028 EPPHIDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPAL 1087
Query: 488 TIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWR-----ECNYST 542
TIAA L S F P DK+ A+ ++ F + D +ALL Y W+ S
Sbjct: 1088 TIAASLAF-KSPFVSPWDKKEEANQKKLEFAFAN-SDYLALLCAYKGWQLSTKESARASY 1145
Query: 543 EWCRENYIQVSSMKRARDIRDQLEGLFARV 572
+CR+N++ +++ ++ Q L + +
Sbjct: 1146 NYCRQNFLSGRTLQEMASLKRQFTELLSDI 1175
Score = 270 (100.1 bits), Expect = 3.2e-61, Sum P(3) = 3.2e-61
Identities = 57/132 (43%), Positives = 84/132 (63%)
Query: 103 EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
+PR ++A+SVA RV++E ++G VGY IR E S T L Y T +LLR + + +L
Sbjct: 601 QPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDATL 660
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFK 222
+ + +IVDE ERT +D L +LKD++ R L++++ SATLDA FS YF P+
Sbjct: 661 QGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSATLDAGLFSKYFSYCPVIT 720
Query: 223 IPGRRYPVELFY 234
IPGR +PV+ F+
Sbjct: 721 IPGRAFPVDQFF 732
Score = 100 (40.3 bits), Expect = 3.2e-61, Sum P(3) = 3.2e-61
Identities = 20/45 (44%), Positives = 31/45 (68%)
Query: 59 EERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE 103
+ER+ LP + E +L+ +S + V+ I G TG GKTTQIPQ++ +
Sbjct: 540 QERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILD 584
>MGI|MGI:1919412 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1919412 GO:GO:0005524 GO:GO:0005634 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0043330 EMBL:CH466530 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:AF448804 EMBL:AC114424
EMBL:AK129373 EMBL:AK013031 IPI:IPI00351266 RefSeq:NP_082412.2
UniGene:Mm.224233 ProteinModelPortal:Q8VHK9 DIP:DIP-48576N
STRING:Q8VHK9 PhosphoSite:Q8VHK9 PaxDb:Q8VHK9 PRIDE:Q8VHK9
Ensembl:ENSMUST00000029336 GeneID:72162 KEGG:mmu:72162
UCSC:uc008pjn.2 InParanoid:Q8VHK9 ChiTaRS:DHX36 NextBio:335597
CleanEx:MM_DHX36 Genevestigator:Q8VHK9
GermOnline:ENSMUSG00000027770 Uniprot:Q8VHK9
Length = 1001
Score = 355 (130.0 bits), Expect = 5.1e-60, Sum P(3) = 5.1e-60
Identities = 98/339 (28%), Positives = 162/339 (47%)
Query: 241 DYIEAAIVTAL--QIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPI 298
D ++ ++ AL I + E G ILVFL G D I ++L + K + +I P+
Sbjct: 461 DKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVM---FKSDKFLIIPL 517
Query: 299 YANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGME 358
++ +PT Q ++F+ TP RK+V+ATNIAETS+TID + YVI G K ++ + +
Sbjct: 518 HSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIS 577
Query: 359 SLLVNPISKASANQRTGLSERTGPGKCFRLYT------LHNYHRIWMTILCQKYNELIWK 412
++ +SKA+A QR G + R PG C+ LY L +Y IL EL +
Sbjct: 578 TMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQL--PEILRTPLEELCLQ 635
Query: 413 MLSLFSNVLVNF--DFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKL 470
+ L + F +DPP AL+K +LT +G +A P++P +
Sbjct: 636 IKILRLGGIAYFLSRLMDPPSNEAVVLSIKHLMELSALDKQEELTPLGVHLARLPVEPHI 695
Query: 471 SKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLR 530
K I+ + C D ++TIAA L + F P K+ AD R D + ++
Sbjct: 696 GKMILFGALFCCLDPVLTIAASLSFKDP-FVIPLGKEKIADARRKELAKETRSDHLTVVN 754
Query: 531 VYNCWRECN-----YSTEWCRENYIQVSSMKRARDIRDQ 564
+ W E Y ++C E ++ ++++ +++ Q
Sbjct: 755 AFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQ 793
Score = 252 (93.8 bits), Expect = 5.1e-60, Sum P(3) = 5.1e-60
Identities = 68/199 (34%), Positives = 107/199 (53%)
Query: 88 ETGSGKTTQIPQYLYEPRWVAAMSVAARVSQEMGVKLGH--EVGYSIRFEDCTSDKT-VL 144
E G G +I +PR ++A+SVA RV+ E G+ GY IR + K +
Sbjct: 243 ERGKGSACRI--VCTQPRRISAISVAERVATERAESCGNGNSTGYQIRLQSRLPRKQGSI 300
Query: 145 KYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSA 204
Y T ++L+ + + L S S +++DE ER L +D L ++KDL+++R DLK+++ SA
Sbjct: 301 LYCTTGIILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSA 360
Query: 205 TLDAEKFSDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAA-IVTALQIHVNEPTGDIL 263
TL+AEKFS+YFG+ P+ IPG +PV + + D IE V + H ++ +
Sbjct: 361 TLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLE----DIIEKIRYVPDQKEHRSQFKRGFM 416
Query: 264 VFLTGQDEIERAEEILKQR 282
+ E E E I K+R
Sbjct: 417 QGHVNRQEKEEKEAIYKER 435
Score = 126 (49.4 bits), Expect = 5.1e-60, Sum P(3) = 5.1e-60
Identities = 39/107 (36%), Positives = 56/107 (52%)
Query: 5 DAWEKQ--QREKCTFEIEDK-IVDFFSESVFDGD----NFDEFESE-LPNKSVVKSTLEM 56
D EK+ +EK TF I DK +D SE + + + D+ E L K +EM
Sbjct: 134 DNQEKKLLNQEKKTFRITDKSYIDRDSEYLLQENEPNLSLDQHLLEDLQRKKTDPRYIEM 193
Query: 57 LQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE 103
Q RK LP Y +EL+ ++ + V I GETG GKTTQ+ Q++ +
Sbjct: 194 -QRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILD 239
>ZFIN|ZDB-GENE-080507-1 [details] [associations]
symbol:dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide
40" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-080507-1 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421
EMBL:CR848791 EMBL:CU861501 IPI:IPI00507978
Ensembl:ENSDART00000101707 Uniprot:E7F7R7
Length = 734
Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
Identities = 145/410 (35%), Positives = 226/410 (55%)
Query: 186 LLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVE-----LFYTKAPEV 240
LLK + LK+++ SATL+ EK S ++G+ P+F IPGR YPV+ L K E
Sbjct: 158 LLKGSRGNKTPLKVVVMSATLETEKLSSFYGNCPVFTIPGRTYPVKETFCNLIGPKDKES 217
Query: 241 D-YIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTK-------IAE 292
Y++ + L +H NE GDILVFLTGQ EIE+A ++L ++ L + +
Sbjct: 218 SVYVKEVVKMTLDVHTNEAAGDILVFLTGQSEIEKACDLLFEKAEILDYRYDVHDRSVDG 277
Query: 293 LIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYN 352
L+I +Y ++PT+ Q +IF+P P+ RK V+ATNIA TSLTIDGI+Y++ GF K ++N
Sbjct: 278 LLILSLYGSMPTDQQRQIFQPAPKGVRKCVVATNIAATSLTIDGIRYIVDSGFVKQLNHN 337
Query: 353 PKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIW--MTIL-CQKYN-- 407
+ G++ L V PISK+ A QR G + RT GKCFR+Y+ + TI Q+ +
Sbjct: 338 SRVGLDILEVVPISKSEAQQRAGRAGRTAAGKCFRIYSKDFWDTCMPEYTIPEIQRTSLT 397
Query: 408 ELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPID 467
+I + L + ++ F ++D P A+++ G++T++GR M EFP+
Sbjct: 398 SVILTLKCLGVHDVIRFPYLDCPEERFILTALKQLYQYDAIDRRGEVTKLGRLMVEFPLP 457
Query: 468 PKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRP----KDKQIYADNARMNFHLGDVG 523
P L++ ++ C D ++ +AAML V N IF RP K K+ + + G
Sbjct: 458 PNLTRALLKAAALGCEDIMLPVAAMLSVEN-IFIRPGKPEKQKEAEVRHKEIAACSGGSN 516
Query: 524 DRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVE 573
D + LL V+ R + WC+EN+I ++K A + QL + R++
Sbjct: 517 DFLMLLCVFEKCRASENPSAWCKENWIHWRAVKSAFSVETQLREILLRLK 566
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 126/260 (48%), Positives = 169/260 (65%)
Query: 48 SVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLY----- 102
S K + E E K LPIY + ++L+QAV L + GETGSGKTTQ+PQYLY
Sbjct: 2 STKKRSSETEHHESKKLPIYQYKDKLVQAVEENTFLIVTGETGSGKTTQLPQYLYKAGLS 61
Query: 103 --------EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLR 154
+PR VAA++VA RVS EM V+LG EVGY +RF+DC++ T++KYMTD LLR
Sbjct: 62 RNGRIGVTQPRRVAAITVAQRVSSEMQVRLGEEVGYQVRFDDCSTKDTMIKYMTDGCLLR 121
Query: 155 EIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLI------NYRPDLKLLISSATLDA 208
EI+ +PSL YS++I+DEA ER+L+TD L GLLK + N P LK+++ SATL+
Sbjct: 122 EILADPSLTQYSIVILDEAHERSLNTDVLLGLLKKTLLKGSRGNKTP-LKVVVMSATLET 180
Query: 209 EKFSDYFGSAPIFKIPGRRYPVE-----LFYTKAPEVD-YIEAAIVTALQIHVNEPTGDI 262
EK S ++G+ P+F IPGR YPV+ L K E Y++ + L +H NE GDI
Sbjct: 181 EKLSSFYGNCPVFTIPGRTYPVKETFCNLIGPKDKESSVYVKEVVKMTLDVHTNEAAGDI 240
Query: 263 LVFLTGQDEIERAEEILKQR 282
LVFLTGQ EIE+A ++L ++
Sbjct: 241 LVFLTGQSEIEKACDLLFEK 260
>TAIR|locus:2008144 [details] [associations]
symbol:AT1G48650 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14442
IPI:IPI00938568 RefSeq:NP_001154411.1 UniGene:At.22775
ProteinModelPortal:F4HYJ6 SMR:F4HYJ6 PRIDE:F4HYJ6
EnsemblPlants:AT1G48650.2 GeneID:841287 KEGG:ath:AT1G48650
OMA:GRIAYND Uniprot:F4HYJ6
Length = 1206
Score = 382 (139.5 bits), Expect = 6.4e-59, Sum P(2) = 6.4e-59
Identities = 119/393 (30%), Positives = 190/393 (48%)
Query: 198 KLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHV-- 255
K LISSA DA + +D+ G F+ R + + +P D I ++ + H+
Sbjct: 525 KSLISSAVEDALEAADFKGYN--FRT---RDSLSCW---SP--DSIGFNLIENVLCHIVK 574
Query: 256 NEPTGDILVFLTGQDEIERAEEILKQRTR-GLGTKIAELIICPIYANLPTELQAKIFEPT 314
E G +LVF+TG D+I + L+ + G K+ L+ C + ++ + Q IF+
Sbjct: 575 GERPGAVLVFMTGWDDINSLKNQLEAHSLLGDPNKVL-LLAC--HGSMASSEQRLIFDRP 631
Query: 315 PERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRT 374
PE RK+VLATN+AETS+TI+ + YVI G AK SY+ LL + ISKA+A QR
Sbjct: 632 PEGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRR 691
Query: 375 GLSERTGPGKCFRLYTLHNYHRI----WMTILCQKYNELIWKMLSLFSNVLVNF--DFID 428
G + R PG+C+ LY Y +L L ++ SL + F +
Sbjct: 692 GRAGRVMPGECYHLYPRCVYEAFADYQQPELLRTPLQSLCLQIKSLGLGSISEFLSRALQ 751
Query: 429 PPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIIT 488
PP GAL+ LT +G+ ++ P++PKL K ++ + C D ++T
Sbjct: 752 PPEALSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGAIFNCLDPVMT 811
Query: 489 IAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYST---EWC 545
+ A L V + F P DK+ A+ AR F D D + L+R YN W++ + ++C
Sbjct: 812 VVAGLSVRDP-FLMPFDKKDLAETARSKFSGRDYSDHLTLVRAYNGWKDAERTHSGYDYC 870
Query: 546 RENYIQVSSMKRARDIRDQLEGLFARVEIDTSI 578
+N++ ++K +R Q L + +I
Sbjct: 871 WKNFLSSQTLKAMDSMRKQFFNLLKEASLIDNI 903
Score = 297 (109.6 bits), Expect = 6.4e-59, Sum P(2) = 6.4e-59
Identities = 66/159 (41%), Positives = 96/159 (60%)
Query: 88 ETGSGKTTQIPQYLYEPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYM 147
E G T I +PR ++A+SV+ RV+ E G ++G VGY +R E T L +
Sbjct: 342 EAARGATCSI--ICTQPRRISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFC 399
Query: 148 TDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLD 207
T +LLR ++++ SL+ + ++VDE ER ++ D L +LKDL+ RPDLKL++ SATL+
Sbjct: 400 TTGVLLRRLLVDRSLKGVTHVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSATLN 459
Query: 208 AEKFSDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAA 246
AE FS YFG AP IPG YPV + + DY+E +
Sbjct: 460 AELFSSYFGGAPAMHIPGFTYPVRAHFLE----DYLETS 494
Score = 124 (48.7 bits), Expect = 1.0e-40, Sum P(2) = 1.0e-40
Identities = 31/88 (35%), Positives = 47/88 (53%)
Query: 61 RKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYEPRWVAAMSV-------- 112
RKTLP Y + LL+A++ V+ + GETG GKTTQ+PQY+ E AA
Sbjct: 296 RKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQ 355
Query: 113 -----AARVSQEMGVKLGHEVGYSIRFE 135
A VS+ + + G ++G S+ ++
Sbjct: 356 PRRISAISVSERVAAERGEQIGESVGYK 383
>FB|FBgn0032883 [details] [associations]
symbol:CG9323 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0002151 "G-quadruplex RNA binding"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0002151
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GeneTree:ENSGT00550000074257 KO:K14442 EMBL:AY095176
RefSeq:NP_610056.1 UniGene:Dm.11353 SMR:Q8SWT2 MINT:MINT-935813
EnsemblMetazoa:FBtr0081459 GeneID:35339 KEGG:dme:Dmel_CG9323
UCSC:CG9323-RA FlyBase:FBgn0032883 InParanoid:Q8SWT2 OMA:PLGMHLA
OrthoDB:EOG4HQC07 GenomeRNAi:35339 NextBio:793041 Uniprot:Q8SWT2
Length = 942
Score = 333 (122.3 bits), Expect = 1.5e-58, Sum P(3) = 1.5e-58
Identities = 97/340 (28%), Positives = 165/340 (48%)
Query: 239 EVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAE-LIICP 297
++D+I A +V I NEP G ILVFL G D+I + IL + G + + + + P
Sbjct: 405 DIDFI-ADLV--YYICENEPEGAILVFLPGYDKISQLYNILDKPKTSKGQRWRDHMAVFP 461
Query: 298 IYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGM 357
+++ + + Q +F P RKV+++T IAETS+TID + YVI+ G K +Y+ +T +
Sbjct: 462 LHSLMQSGEQQAVFRRPPAGQRKVIISTIIAETSVTIDDVVYVINSGRTKATNYDIETNI 521
Query: 358 ESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRI----WMTILCQKYNELIWKM 413
+SL ++KA+ QR G + R PG C+ L++ R+ IL K +I +
Sbjct: 522 QSLDEVWVTKANTQQRRGRAGRVRPGICYNLFSRAREDRMDDIPTPEILRSKLESIILSL 581
Query: 414 LSLFSNVLVNF--DFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLS 471
L + F I+ P AL++ G LT +G +A+ PIDP++
Sbjct: 582 KLLHIDDPYRFLQTLINAPNPEAIKMGVELLKRIEALDQTGTLTPLGMHLAKLPIDPQMG 641
Query: 472 KTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRV 531
K I+ + C D I + AA L S FY P K+ D + D + +
Sbjct: 642 KMILMSALFCCLDPITSAAAALSF-KSPFYSPLGKESRVDEIKRRMARNMRSDHLMVHNT 700
Query: 532 YNCWRECNYS---TEWCRENYIQVSSMKRARDIRDQLEGL 568
+R+ YS ++C +N++ ++++ +++Q L
Sbjct: 701 IIAYRDSRYSHAERDFCYKNFLSSMTLQQLERMKNQFSEL 740
Score = 273 (101.2 bits), Expect = 1.5e-58, Sum P(3) = 1.5e-58
Identities = 54/133 (40%), Positives = 89/133 (66%)
Query: 103 EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTS-DKTVLKYMTDCMLLREIVIEPS 161
+PR ++A+++A VS E LG+ VGY IR E + ++ + Y T +LL+++ +P
Sbjct: 209 QPRRISAIAIAEWVSYERCESLGNSVGYQIRLESRKARERASITYCTTGVLLQQLQSDPL 268
Query: 162 LESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIF 221
+ + SVLI+DE ER++ TD L GLLK ++ +RPDLK+++ SAT+ + F DYF + P+F
Sbjct: 269 MHNLSVLILDEIHERSVETDLLMGLLKVILPHRPDLKVILMSATVREQDFCDYFNNCPMF 328
Query: 222 KIPGRRYPVELFY 234
+I G +PV++ Y
Sbjct: 329 RIEGVMFPVKMLY 341
Score = 116 (45.9 bits), Expect = 1.5e-58, Sum P(3) = 1.5e-58
Identities = 34/104 (32%), Positives = 56/104 (53%)
Query: 5 DA-WEKQQREKCTFEIEDKIVDFFSESV-FDGDN--FDE-FESELPNKSVVKSTLEMLQE 59
DA +++Q R + E+ + + + D N DE + EL + + ++ + L E
Sbjct: 90 DAKFQQQFRHLLSVNFEEFVAETKERNADLDWVNPKLDERLQLELGQRQLEENAKKRL-E 148
Query: 60 ERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE 103
RK LP + ++++QAV V+ IVG TG GKTTQ+PQ L +
Sbjct: 149 ARKKLPTMKYADDIIQAVRENQVILIVGSTGCGKTTQVPQILLD 192
>UNIPROTKB|E2QX71 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026
OMA:RAYKGWQ EMBL:AAEX03010868 RefSeq:XP_540155.1
Ensembl:ENSCAFT00000010087 GeneID:483040 KEGG:cfa:483040
Uniprot:E2QX71
Length = 1382
Score = 381 (139.2 bits), Expect = 2.8e-58, Sum P(2) = 2.8e-58
Identities = 108/348 (31%), Positives = 175/348 (50%)
Query: 240 VDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIY 299
++ IEA + + + P G ILVFL G EI+ E L+ + + ++ P++
Sbjct: 824 LELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVVHPLH 883
Query: 300 ANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMES 359
++L +E Q +F P K++++TNIAETS+TID + YVI G K K Y+ GMES
Sbjct: 884 SSLSSEEQQAVFVKPPVGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMES 943
Query: 360 LLVNPISKASANQRTGLSERTGPGKCFRLYTLHNY-HRIWMTIL--CQKY--NELIW--K 412
L +S+A+A QR G + R G CF L+T H++ H++ L Q+ +L K
Sbjct: 944 LEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIK 1003
Query: 413 MLSLFS--NVLVNFD-FIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPK 469
+L +FS N+ F I+PP GAL +LT +G +A P+D +
Sbjct: 1004 ILEMFSTHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDEKLTPLGYHLASLPVDVR 1063
Query: 470 LSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALL 529
+ K ++ ++C D +TIAA L S F P DK+ A+ ++ F + D +ALL
Sbjct: 1064 IGKLMLFGSIFRCLDPALTIAASLAF-KSPFVSPWDKKEEANQKKLEFAFAN-SDYLALL 1121
Query: 530 RVYNCW----RE-CNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARV 572
R Y W +E S +CR+N++ ++ ++ Q L + +
Sbjct: 1122 RAYKGWQLSMKEGMRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDI 1169
Score = 294 (108.6 bits), Expect = 2.8e-58, Sum P(2) = 2.8e-58
Identities = 63/151 (41%), Positives = 98/151 (64%)
Query: 85 IVGETGSGKTTQIPQYLY-EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTV 143
I+ ++ SG ++ + +PR ++A+SVA RV++E ++G VGY IR E S T
Sbjct: 577 ILDDSLSGPPEKVANIICTQPRRISAISVAERVAKERTERVGLTVGYQIRLESVKSSATR 636
Query: 144 LKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISS 203
L Y T +LLR + + SL+ + +IVDE ERT +D L +LKD++ RP+L++++ S
Sbjct: 637 LLYCTTGVLLRRLEGDTSLQGVTHIIVDEVHERTEESDFLLLVLKDIVLQRPNLQVILMS 696
Query: 204 ATLDAEKFSDYFGSAPIFKIPGRRYPVELFY 234
ATL+AE FS+YF S P+ IPGR +PV+ F+
Sbjct: 697 ATLNAELFSEYFSSCPVITIPGRTFPVDQFF 727
Score = 106 (42.4 bits), Expect = 1.6e-38, Sum P(2) = 1.6e-38
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 55 EMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE 103
+ + +ER++LP + E +L+ +S + VL I G TG GKTTQIPQ++ +
Sbjct: 531 QSILQERQSLPAWEERETILKLLSEHQVLVISGMTGCGKTTQIPQFILD 579
>UNIPROTKB|F5H3Y4 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00217630 HGNC:HGNC:17210
EMBL:AC093719 ProteinModelPortal:F5H3Y4 SMR:F5H3Y4
Ensembl:ENST00000544745 ArrayExpress:F5H3Y4 Bgee:F5H3Y4
Uniprot:F5H3Y4
Length = 962
Score = 390 (142.3 bits), Expect = 9.5e-58, Sum P(2) = 9.5e-58
Identities = 98/239 (41%), Positives = 141/239 (58%)
Query: 57 LQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------------- 103
+QEER LPI + +++AV+ +P++ + GETGSGKTTQ+PQ+LYE
Sbjct: 32 MQEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGFSSEDSIIGVT 91
Query: 104 -PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
PR VAA++++ RV++EM + V Y IR+E +++T +K+MTD +LL+EI + L
Sbjct: 92 EPRRVAAVAMSQRVAKEMNLSQ-RVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLL 150
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPD----LKLLISSATLDAEKFSD---YF 215
Y V+I+DEA ER++ TD L GLL ++ R LKLLI SATL E F+ F
Sbjct: 151 LRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIMSATLRVEDFTQNPRLF 210
Query: 216 GSAP-IFKIPGRRYPVELFYTK-APEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEI 272
P + K+ R++PV + + K P DY +IH P G ILVFLTGQ E+
Sbjct: 211 AKPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQAEV 269
Score = 272 (100.8 bits), Expect = 9.5e-58, Sum P(2) = 9.5e-58
Identities = 66/175 (37%), Positives = 98/175 (56%)
Query: 293 LIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYN 352
L + P+Y+ L E QA++F+P PE R V+ATN+AETSLTI GIKYV+ G K + Y+
Sbjct: 375 LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYD 434
Query: 353 PKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYT---LHNYHRIWMTILCQK-YNE 408
TG+ S V +S+ASA+QR G + RT PG C+RLY+ ++ + + ++ +
Sbjct: 435 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEQFPPPEITRRPVED 494
Query: 409 LIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAE 463
LI +M +L ++NF F PP GAL + RV +Q+ E
Sbjct: 495 LILQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQKAERV-KQLQE 548
Score = 91 (37.1 bits), Expect = 1.0e-38, Sum P(2) = 1.0e-38
Identities = 47/190 (24%), Positives = 78/190 (41%)
Query: 408 ELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALN---KAGQ----------- 453
+LI +M +L ++NF F PP GAL KA +
Sbjct: 494 DLILQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQKAERVKQLQENRLSC 553
Query: 454 -LTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFY---RP--KDKQ 507
+T +GR MA FP+ P+ +K + ++ C ITI A + V +F RP D++
Sbjct: 554 PITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTV-RELFEELDRPAASDEE 612
Query: 508 IY---ADNARM----NFHLGD-----VGDRIALLRVYNCWRECNYSTEWCRENYIQVSSM 555
+ + AR+ G +GD + LL + + ++C N ++ +M
Sbjct: 613 LTRLKSKRARVAQMKRTWAGQGASLKLGDLMVLLGAVGACEYASCTPQFCEANGLRYKAM 672
Query: 556 KRARDIRDQL 565
R +R QL
Sbjct: 673 MEIRRLRGQL 682
Score = 40 (19.1 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 155 EIVIEPSLESYSVLIVDEAQE-RTLSTDNLFGLL-KDL 190
E++ + +L+ YSVL E E R D G L DL
Sbjct: 317 EVLPQINLDHYSVLPAGEGDEDREAEVDEEEGALDSDL 354
>UNIPROTKB|E2RHZ3 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 OMA:AKLQPRT
EMBL:AAEX03014623 RefSeq:XP_534640.2 Ensembl:ENSCAFT00000011159
GeneID:477442 KEGG:cfa:477442 NextBio:20852918 Uniprot:E2RHZ3
Length = 1149
Score = 391 (142.7 bits), Expect = 1.1e-57, Sum P(2) = 1.1e-57
Identities = 101/246 (41%), Positives = 145/246 (58%)
Query: 50 VKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------ 103
V T EM QEER LPI + +++AV+ +P++ + GETGSGKTTQ+PQ+LYE
Sbjct: 233 VNRTPEM-QEERLKLPILAEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGYSSD 291
Query: 104 --------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLRE 155
PR VAA++++ RV++EM + V Y IR+E +++T +K+MTD +LL+E
Sbjct: 292 NSIIGITEPRRVAAVAMSQRVAKEMNLSQ-RVVSYQIRYEGNVTEETRIKFMTDGVLLKE 350
Query: 156 IVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPD----LKLLISSATLDAEKF 211
I + L Y V+++DEA ER++ TD L GLL +++ R LKLLI SATL E F
Sbjct: 351 IQKDFLLLRYKVVLIDEAHERSVYTDILIGLLSRIVSLRAKRHLPLKLLIMSATLRVEDF 410
Query: 212 SD---YFGSAP-IFKIPGRRYPVELFYTK-APEVDYIEAAIVTALQIHVNEPTGDILVFL 266
+ F P + K+ R++PV + + K P DY +IH P G ILVFL
Sbjct: 411 TQNQRLFPQPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFL 470
Query: 267 TGQDEI 272
TGQ E+
Sbjct: 471 TGQAEV 476
Score = 273 (101.2 bits), Expect = 1.1e-57, Sum P(2) = 1.1e-57
Identities = 66/173 (38%), Positives = 98/173 (56%)
Query: 293 LIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYN 352
L + P+Y+ L E QA++F+P PE R V+ATN+AETSLTI GIKYV+ G K + Y+
Sbjct: 582 LHVLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRHYD 641
Query: 353 PKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYT---LHNYHRIWMTILCQK-YNE 408
TG+ S V +S+ASA+QR G + RT PG C+RLY+ ++ + + ++ +
Sbjct: 642 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFSDFEQFPPPEITRRPVED 701
Query: 409 LIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQM 461
LI +M +L ++NF F PP GAL +A Q T +Q+
Sbjct: 702 LILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGAL-QAPQKTESVKQL 753
Score = 92 (37.4 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 50/190 (26%), Positives = 74/190 (38%)
Query: 408 ELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALN------KAGQLTR----- 456
+LI +M +L ++NF F PP GAL QL R
Sbjct: 701 DLILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPQKTESVKQLQRSWLGC 760
Query: 457 ----VGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFY---RP------ 503
+GR MA FP+ P+ +K + ++ C ITI A + V +F RP
Sbjct: 761 PITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVAAMTV-RELFEELDRPAASDEE 819
Query: 504 ----KDKQI-YADNARMNFHLG---DVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSM 555
KDK+ A R+ G +GD + LL S ++C N ++ +M
Sbjct: 820 LGQLKDKRARVAQMKRIWAGQGASLKLGDIMVLLGAVGACEYSGRSPQFCEANGLRYKAM 879
Query: 556 KRARDIRDQL 565
R +R QL
Sbjct: 880 MEIRRLRGQL 889
Score = 39 (18.8 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 161 SLESYSVLIVDEAQE 175
SL+SYSVL E E
Sbjct: 529 SLDSYSVLPAGEGDE 543
>ZFIN|ZDB-GENE-030131-4505 [details] [associations]
symbol:dhx37 "DEAH (Asp-Glu-Ala-His) box
polypeptide 37" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4505 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780
CTD:57647 HOVERGEN:HBG051356 OMA:AKLQPRT EMBL:CABZ01014508
EMBL:CABZ01038687 EMBL:CABZ01038688 EMBL:CABZ01038689
EMBL:CABZ01038690 EMBL:CABZ01038691 EMBL:CABZ01038692
EMBL:CABZ01038693 EMBL:CABZ01038694 EMBL:CABZ01038695
EMBL:CABZ01038696 EMBL:CU469504 EMBL:FP085395 IPI:IPI00488738
RefSeq:NP_001076473.2 UniGene:Dr.79711 Ensembl:ENSDART00000090731
Ensembl:ENSDART00000127153 GeneID:100009635 KEGG:dre:100009635
NextBio:20787816 Uniprot:B8JLP0
Length = 1152
Score = 380 (138.8 bits), Expect = 1.1e-57, Sum P(2) = 1.1e-57
Identities = 105/288 (36%), Positives = 157/288 (54%)
Query: 8 EKQQREKCTFEIEDKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTLPIY 67
E+QQ++ E + K D E + + + + + P + L +QE R LP+
Sbjct: 199 EEQQQQVLKEETKPKEADMKEEK--KAETWTKEDCK-PAVFIPVERLPEIQEARLRLPVL 255
Query: 68 PFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE--------------PRWVAAMSVA 113
+ +++AV + + + GETGSGKTTQ+PQ+LYE PR VAA+S++
Sbjct: 256 AEEQIIMEAVKDHECVVLCGETGSGKTTQVPQFLYEAGFASSGGIIGVTEPRRVAAISMS 315
Query: 114 ARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEA 173
RV+ EM + G V Y IR+E ++ T +K MTD +LL+EI + L+ YSV+I+DEA
Sbjct: 316 HRVATEMNLSSG-VVSYQIRYEGNVTENTKIKVMTDGVLLKEIQRDFLLQKYSVIIIDEA 374
Query: 174 QERTLSTDNLFGLLKDLINYRPD----LKLLISSATLDAEKFSD---YFGSAP-IFKIPG 225
ER++ TD L GLL ++ R +KL+I SATL E F++ F S P + K+
Sbjct: 375 HERSVYTDILIGLLSRIVPLRNKKGLPMKLIIMSATLRVEDFTENKRLFSSPPPVIKVEA 434
Query: 226 RRYPVELFYTK-APEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEI 272
R++ V + + K P DY +IH P G ILVFLTGQ E+
Sbjct: 435 RQFAVTVHFNKRTPMDDYTGETFRKICKIHRMLPPGGILVFLTGQAEV 482
Score = 287 (106.1 bits), Expect = 1.1e-57, Sum P(2) = 1.1e-57
Identities = 71/183 (38%), Positives = 97/183 (53%)
Query: 293 LIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYN 352
L + P+Y+ L E QAK+F P P +R V+ATN+AETSLTI GIKYV+ G K + Y+
Sbjct: 580 LYVLPLYSLLAPEQQAKVFRPPPAGSRLCVVATNVAETSLTIPGIKYVVDCGRVKKRFYD 639
Query: 353 PKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIWM----TILCQKYNE 408
TG+ S V IS+ASANQR G + RT PG C+RLY+ + + I + +
Sbjct: 640 RVTGVSSFKVTWISQASANQRAGRAGRTEPGHCYRLYSSAVFGDFSLFSEAEITRRPVED 699
Query: 409 LIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKA---GQLTRVGRQMAEFP 465
L+ +M L +VNF F PP GAL K G+L+ + + P
Sbjct: 700 LVLQMKDLNIEKVVNFPFPTPPSSEALIAAEELLISLGALEKPARHGRLSEMEKARLSCP 759
Query: 466 IDP 468
I P
Sbjct: 760 ISP 762
Score = 106 (42.4 bits), Expect = 2.0e-39, Sum P(3) = 2.0e-39
Identities = 52/206 (25%), Positives = 80/206 (38%)
Query: 408 ELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKA---GQLTRV------- 457
+L+ +M L +VNF F PP GAL K G+L+ +
Sbjct: 699 DLVLQMKDLNIEKVVNFPFPTPPSSEALIAAEELLISLGALEKPARHGRLSEMEKARLSC 758
Query: 458 -----GRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIF--Y-RPKDKQIY 509
GR MA FP+ P+ +K + + C IITI + + V IF Y RP +
Sbjct: 759 PISPLGRAMAAFPVAPRYAKMLALGRQQGCMQYIITIVSAMTV-REIFEDYDRPAGSE-- 815
Query: 510 ADNARMN-----------FHLGD-----VGDRIALLRVYNCWRECNYSTEWCRENYIQVS 553
+N +M+ G +GD + LL + ++C EN ++
Sbjct: 816 EENVKMSGKKARSVQMRRLWAGQGASLLLGDLMVLLGAVGACEFAGLTPQFCEENGLRFK 875
Query: 554 SMKRARDIRDQLEGLFARVEIDTSIY 579
+M R +R QL V D +Y
Sbjct: 876 AMLEIRRLRGQLTNAVNAVCADADVY 901
Score = 46 (21.3 bits), Expect = 2.0e-39, Sum P(3) = 2.0e-39
Identities = 10/44 (22%), Positives = 22/44 (50%)
Query: 346 AKVKSYN-PKTGMESLLVNPISKASANQRTGLSERTGPGKCFRL 388
AK K+ + P+ +++ P+ + +++ G+ E G G L
Sbjct: 517 AKKKNVSLPRINLDNYSALPVDEGDEDRQAGIDEDDGEGSDLEL 560
Score = 44 (20.5 bits), Expect = 4.7e-21, Sum P(3) = 4.7e-21
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 161 SLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISS-ATLDAEKFSDYFGSAP 219
+L++YS L VDE E D G+ +D DL+L + D E+ +D S P
Sbjct: 528 NLDNYSALPVDEGDE-----DRQAGIDED-DGEGSDLELELGDHPDTDHEEKAD--PSIP 579
Query: 220 IFKIP 224
++ +P
Sbjct: 580 LYVLP 584
Score = 41 (19.5 bits), Expect = 4.7e-21, Sum P(3) = 4.7e-21
Identities = 14/56 (25%), Positives = 27/56 (48%)
Query: 9 KQQREKCTFEIEDKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTL 64
K++RE E E++ SES D D+ +E +S K + +++++ L
Sbjct: 153 KRRRE--ADEEEEENESEMSESSEDDDDSEESDSSEEEKEKISEEKHTEEQQQQVL 206
>UNIPROTKB|E1C550 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 GeneTree:ENSGT00550000074257
OMA:GRIAYND EMBL:AADN02021100 IPI:IPI00601151
Ensembl:ENSGALT00000016841 Uniprot:E1C550
Length = 985
Score = 358 (131.1 bits), Expect = 1.3e-57, Sum P(3) = 1.3e-57
Identities = 102/346 (29%), Positives = 164/346 (47%)
Query: 241 DYIEAAIVTALQIHV--NEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPI 298
D ++ ++ AL H+ E G ILVFL G D I ++L + K II P+
Sbjct: 449 DKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVM---FKSDRFIIIPL 505
Query: 299 YANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGME 358
++ +PT Q ++F+ TP RK+V+ATNIAETS+TID + +VI G K ++ + +
Sbjct: 506 HSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFDTQNNIS 565
Query: 359 SLLVNPISKASANQRTGLSERTGPGKCFRLYT------LHNYHRIWMTILCQKYNELIW- 411
++ +SKA+A QR G + R PG C+ LY L +Y IL EL
Sbjct: 566 TMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQL--PEILRTPLEELCLQ 623
Query: 412 -KMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKL 470
K+L L +DPP AL++ +LT +G +A P++P +
Sbjct: 624 IKILKLGGIAYFLSKLMDPPSRDAVMLAINHLMELNALDRQEELTPLGVHLARLPVEPHI 683
Query: 471 SKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLR 530
K I+ + C D ++TIAA L + F P K+ AD R D + ++
Sbjct: 684 GKMILFGALFCCLDPVLTIAASLSFKDP-FVIPLGKEKVADARRKELSKNTKSDHLTVVN 742
Query: 531 VYNCWRECN---YSTE--WCRENYIQVSSMKRARDIRDQL-EGLFA 570
+ W E + TE +C E ++ ++++ +++ Q E L A
Sbjct: 743 AFTGWEETRRRGFRTEKDYCWEYFLSPNTLQMLHNMKGQFAEHLLA 788
Score = 248 (92.4 bits), Expect = 1.3e-57, Sum P(3) = 1.3e-57
Identities = 58/146 (39%), Positives = 87/146 (59%)
Query: 88 ETGSGKTTQIPQYLYEPRWVAAMSVAARVSQEMGVKLGH--EVGYSIRFEDCTSDKT-VL 144
E G G T +I +PR ++A+SVA RV+ E G+ GY IR + K +
Sbjct: 231 ERGKGSTCRI--VCTQPRRISAISVAERVAAERAEACGNGKSTGYQIRLQSRLPRKQGSI 288
Query: 145 KYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSA 204
Y T ++L+ + + L S S +++DE ER L +D L ++KDL+N R DLK+++ SA
Sbjct: 289 LYCTTGIVLQWLQSDKHLSSISHVVLDEIHERNLQSDVLMSIIKDLLNVRLDLKVILMSA 348
Query: 205 TLDAEKFSDYFGSAPIFKIPGRRYPV 230
TL+AEKFS+YF + P+ IPG +PV
Sbjct: 349 TLNAEKFSEYFDNCPMIHIPGFTFPV 374
Score = 103 (41.3 bits), Expect = 1.3e-57, Sum P(3) = 1.3e-57
Identities = 28/86 (32%), Positives = 47/86 (54%)
Query: 21 DKIVDF-FSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTLPIYPFWE--ELLQAV 77
D+ V++ F ++ D D ++ + +L K +EM Q R+ LP Y + EL+ +
Sbjct: 143 DQDVEYLFEKNDQDADLDEQLKEDLRKKKSDPRYIEM-QRFREKLPSYGMRQKQELVNLI 201
Query: 78 SGYPVLAIVGETGSGKTTQIPQYLYE 103
+ V I GETG GKTTQ+ Q++ +
Sbjct: 202 NNNRVTVISGETGCGKTTQVTQFILD 227
>UNIPROTKB|Q8IY37 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000201240 KO:K14780 EMBL:BC002575 EMBL:BC037964
EMBL:AB040950 IPI:IPI00217630 RefSeq:NP_116045.2 UniGene:Hs.107382
ProteinModelPortal:Q8IY37 SMR:Q8IY37 IntAct:Q8IY37 STRING:Q8IY37
PhosphoSite:Q8IY37 DMDM:38257651 PaxDb:Q8IY37 PRIDE:Q8IY37
Ensembl:ENST00000308736 GeneID:57647 KEGG:hsa:57647 UCSC:uc001ugy.3
CTD:57647 GeneCards:GC12M125431 HGNC:HGNC:17210 HPA:HPA047607
neXtProt:NX_Q8IY37 PharmGKB:PA27224 HOVERGEN:HBG051356
InParanoid:Q8IY37 OMA:AKLQPRT OrthoDB:EOG4P2Q1J PhylomeDB:Q8IY37
GenomeRNAi:57647 NextBio:64382 ArrayExpress:Q8IY37 Bgee:Q8IY37
CleanEx:HS_DHX37 Genevestigator:Q8IY37 GermOnline:ENSG00000150990
Uniprot:Q8IY37
Length = 1157
Score = 390 (142.3 bits), Expect = 2.0e-57, Sum P(2) = 2.0e-57
Identities = 98/239 (41%), Positives = 141/239 (58%)
Query: 57 LQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------------- 103
+QEER LPI + +++AV+ +P++ + GETGSGKTTQ+PQ+LYE
Sbjct: 245 MQEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGFSSEDSIIGVT 304
Query: 104 -PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
PR VAA++++ RV++EM + V Y IR+E +++T +K+MTD +LL+EI + L
Sbjct: 305 EPRRVAAVAMSQRVAKEMNLSQ-RVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLL 363
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPD----LKLLISSATLDAEKFSD---YF 215
Y V+I+DEA ER++ TD L GLL ++ R LKLLI SATL E F+ F
Sbjct: 364 LRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIMSATLRVEDFTQNPRLF 423
Query: 216 GSAP-IFKIPGRRYPVELFYTK-APEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEI 272
P + K+ R++PV + + K P DY +IH P G ILVFLTGQ E+
Sbjct: 424 AKPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQAEV 482
Score = 272 (100.8 bits), Expect = 2.0e-57, Sum P(2) = 2.0e-57
Identities = 66/175 (37%), Positives = 98/175 (56%)
Query: 293 LIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYN 352
L + P+Y+ L E QA++F+P PE R V+ATN+AETSLTI GIKYV+ G K + Y+
Sbjct: 588 LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYD 647
Query: 353 PKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYT---LHNYHRIWMTILCQK-YNE 408
TG+ S V +S+ASA+QR G + RT PG C+RLY+ ++ + + ++ +
Sbjct: 648 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEQFPPPEITRRPVED 707
Query: 409 LIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAE 463
LI +M +L ++NF F PP GAL + RV +Q+ E
Sbjct: 708 LILQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQKAERV-KQLQE 761
Score = 91 (37.1 bits), Expect = 2.1e-38, Sum P(2) = 2.1e-38
Identities = 47/190 (24%), Positives = 78/190 (41%)
Query: 408 ELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALN---KAGQ----------- 453
+LI +M +L ++NF F PP GAL KA +
Sbjct: 707 DLILQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQKAERVKQLQENRLSC 766
Query: 454 -LTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFY---RP--KDKQ 507
+T +GR MA FP+ P+ +K + ++ C ITI A + V +F RP D++
Sbjct: 767 PITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTV-RELFEELDRPAASDEE 825
Query: 508 IY---ADNARM----NFHLGD-----VGDRIALLRVYNCWRECNYSTEWCRENYIQVSSM 555
+ + AR+ G +GD + LL + + ++C N ++ +M
Sbjct: 826 LTRLKSKRARVAQMKRTWAGQGASLKLGDLMVLLGAVGACEYASCTPQFCEANGLRYKAM 885
Query: 556 KRARDIRDQL 565
R +R QL
Sbjct: 886 MEIRRLRGQL 895
Score = 40 (19.1 bits), Expect = 4.2e-19, Sum P(2) = 4.2e-19
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 155 EIVIEPSLESYSVLIVDEAQE-RTLSTDNLFGLL-KDL 190
E++ + +L+ YSVL E E R D G L DL
Sbjct: 530 EVLPQINLDHYSVLPAGEGDEDREAEVDEEEGALDSDL 567
>MGI|MGI:2136388 [details] [associations]
symbol:Dqx1 "DEAQ RNA-dependent ATPase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006200 "ATP catabolic
process" evidence=ISA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 MGI:MGI:2136388 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 GO:GO:0016887 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:165545 KO:K14433 OMA:CGQAVQA
OrthoDB:EOG4548Z3 EMBL:AF318278 EMBL:BC048936 EMBL:BC075680
IPI:IPI00125675 IPI:IPI00844713 RefSeq:NP_291084.1
UniGene:Mm.140332 ProteinModelPortal:Q924H9 SMR:Q924H9
PhosphoSite:Q924H9 PRIDE:Q924H9 Ensembl:ENSMUST00000077502
GeneID:93838 KEGG:mmu:93838 UCSC:uc009cmc.1 UCSC:uc009cmd.1
InParanoid:Q924H9 NextBio:351693 Bgee:Q924H9 CleanEx:MM_DQX1
Genevestigator:Q924H9 Uniprot:Q924H9
Length = 718
Score = 582 (209.9 bits), Expect = 1.6e-56, P = 1.6e-56
Identities = 168/537 (31%), Positives = 268/537 (49%)
Query: 69 FWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE----------------PRWVAAMSV 112
F E L + +G V+ + G+ GSGK+TQIPQ+ E P +AAMS+
Sbjct: 51 FLEHLESSPTG--VVLVSGDPGSGKSTQIPQWCAEFALARGFQTGQVTVTQPYPLAAMSL 108
Query: 113 AARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDE 172
A+RV+ EM + LGHE+GYSI EDCT T+L++ D + L+E+ ++SVLI+DE
Sbjct: 109 ASRVADEMDLTLGHEIGYSIPQEDCTGPNTMLRFCWDRLFLQEVASTRGPGAWSVLILDE 168
Query: 173 AQERTLSTDNLFGLLKD--LINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYP- 229
AQER++++D L GLL+D L N D ++++ + KF ++G++PI ++P R P
Sbjct: 169 AQERSVASDLLQGLLRDTRLRNLPGDPRVVVVTDPALEPKFQAFWGNSPIVRVP--REPG 226
Query: 230 --VELFYTKAPEVDYIEAAIVTALQI-HVNEPTGDILVFLTGQDEIERAEEILKQRTRGL 286
L Y D +EAA L++ E GD+LV+L ++EI E L L
Sbjct: 227 GDPTLAYKDTVPTDLVEAACQAVLELCQQEEAPGDVLVYLPSEEEISLCCESLSGEMGTL 286
Query: 287 GTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFA 346
+ P++ +Q ++E T RK+V+ +A+ S ++ I++VI G
Sbjct: 287 AVPGPPPRVLPLHPGCAQAIQT-VYEDTDVSVRKIVVTHWLADFSFSLPSIQHVIDSGLE 345
Query: 347 KVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIWMTILCQKY 406
YNP+ ES ++ PISK A R ++ PG C RLY+ + K
Sbjct: 346 LRSVYNPRIRAESQVLRPISKCQAEARLLRAKGFPPGSCLRLYSKSTLELEAPPLPHPKV 405
Query: 407 NE--LIWKMLSLFSNVLVN---FDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQM 461
E L +L L + F+D P ALN G+L+ +G +
Sbjct: 406 CEENLSSLVLLLMRKQIAEPGECHFLDRPAPEALMRALEDLDYLAALNDDGELSDLGVIL 465
Query: 462 AEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGD 521
+EFP+ P+L+K +++ ++ C DE++T+AAML F RP + A A + L
Sbjct: 466 SEFPLPPELAKALLASCEFNCVDEMLTLAAMLTAAPG-FTRPP---LSAGEAALRRALEH 521
Query: 522 V-GDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVEIDTS 577
GD +L++VY + + WC+ + S+ +AR +R +L L R+E+ S
Sbjct: 522 ADGDHSSLIQVYEAFVQSGADEAWCQARGLNWESLCQARKLRAELVELMQRIELPLS 578
>UNIPROTKB|Q3ZBE0 [details] [associations]
symbol:DQX1 "ATP-dependent RNA helicase DQX1" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0004386
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 EMBL:BC103411 IPI:IPI00704154
RefSeq:NP_001030399.1 UniGene:Bt.49583 PRIDE:Q3ZBE0
Ensembl:ENSBTAT00000033191 GeneID:517947 KEGG:bta:517947 CTD:165545
InParanoid:Q3ZBE0 KO:K14433 OMA:CGQAVQA OrthoDB:EOG4548Z3
NextBio:20872543 Uniprot:Q3ZBE0
Length = 719
Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
Identities = 164/536 (30%), Positives = 272/536 (50%)
Query: 69 FWEELLQAVSGYPVLAIVGETGSGKTTQIPQYL--------YEPRWV--------AAMSV 112
F E L + SG V+ + GE G GK+TQIPQ+ ++ WV AA+S+
Sbjct: 54 FLEHLESSPSG--VVLVSGEPGCGKSTQIPQWCAEFVLARGFQKGWVTVTQPYPLAALSL 111
Query: 113 AARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDE 172
A RV+ EM + LGHEVGYSI EDCT T+L++ D +LL+E+ + VLI+DE
Sbjct: 112 ALRVADEMDLTLGHEVGYSIPQEDCTGPDTLLRFCWDRLLLQEVASTRGTGARGVLILDE 171
Query: 173 AQERTLSTDNLFGLLKDL-INYRP-DLKLLISSATLDAEKFSDYFGSAPIFKIPGRR--Y 228
AQER++++D L GLL+D + P DL++++ + K D++G P +P +
Sbjct: 172 AQERSVASDLLQGLLRDARLGSLPGDLRVVVVTDPSLEPKLQDFWGGPPTVCVPRKTGSC 231
Query: 229 PVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGT 288
P ++ P D ++AA L+ E GD+LV+L ++EI E L ++ R L
Sbjct: 232 PTPVYRDSLP-ADRVDAACQAVLEWCQEEAPGDVLVYLPSEEEISLCCESLSRKVRSLEN 290
Query: 289 KIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKV 348
+ + P++ +QA ++E T ARKVV+ +A+ S ++ I++VI G
Sbjct: 291 QGPPPRVLPLHPGCGQAVQA-VYEDTESGARKVVVTHWLADFSFSLPSIRHVIDSGLELR 349
Query: 349 KSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIWMTILCQK--Y 406
Y+P+ ES ++ P+SK A R + PG C LY ++ + L Q +
Sbjct: 350 SVYSPQIRAESQVLRPVSKCQAEARRLRAAGIPPGSCLCLYP-KSFLELEAPYLPQPRVW 408
Query: 407 NELIWKMLSLFSNVLV----NFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMA 462
E + ++ L + F+D P AL+ G L+ +G ++
Sbjct: 409 AENLSSLMLLLKRRQIAEPGKCHFLDRPAPEALMQALEDLDYLAALDDDGDLSDLGVILS 468
Query: 463 EFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDV 522
EFP+ P+L+K +++ ++ C DE++T+AAML F RP + A+ A + L V
Sbjct: 469 EFPLAPELAKALLASCEFDCVDEMLTLAAMLTAAPG-FTRPP---VCAEEAALRRALEHV 524
Query: 523 -GDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVEIDTS 577
GD +L++VY + + WC+ + +++ +AR +R +L L R+E+ S
Sbjct: 525 DGDHSSLIQVYEAFIQSGADKAWCQARGLNWAALCQARKLRGELLELMQRIELPLS 580
>ZFIN|ZDB-GENE-050419-20 [details] [associations]
symbol:si:dkey-119o24.1 "si:dkey-119o24.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-050419-20 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257
HOVERGEN:HBG081438 KO:K14442 OrthoDB:EOG4K6G3J OMA:GRIAYND
EMBL:BX908763 EMBL:BX927166 IPI:IPI00633899 RefSeq:NP_001122016.1
UniGene:Dr.130296 Ensembl:ENSDART00000109467 GeneID:569072
KEGG:dre:569072 InParanoid:A3KQN8 NextBio:20889491 Uniprot:A3KQN8
Length = 1037
Score = 347 (127.2 bits), Expect = 3.4e-56, Sum P(3) = 3.4e-56
Identities = 100/346 (28%), Positives = 164/346 (47%)
Query: 241 DYIEAAIVTALQIH--VNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPI 298
D I+ + AL H VNE G ILVFL G D I ++L + II P+
Sbjct: 482 DNIDLELTAALIRHIAVNENEGAILVFLPGWDNISTLNDLLMSDQMFKSGRY-RFIIIPL 540
Query: 299 YANLPTELQAKI-------FEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSY 351
++ +PT Q ++ F+ P RK+V+ATNIAETS+TID + YVI G K +
Sbjct: 541 HSLMPTVSQTQVISLFPQVFKKPPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHF 600
Query: 352 NPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYT------LHNYH--RIWMTILC 403
+ + + ++ +S A+A QR G + R PGKC+ LY L NY I T L
Sbjct: 601 DTQNNIRTMTAEWVSIANAKQRKGRAGRVSPGKCYHLYNGLRASLLDNYQLPEIQRTPLE 660
Query: 404 QKYNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAE 463
+ ++ K+L L +DPP AL++ +LT +G +A
Sbjct: 661 ELCLQI--KVLKLGPIATFLQKTMDPPSDRAIELAITHLVDLNALDRDEKLTPLGFHLAR 718
Query: 464 FPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVG 523
P++P + K I+ C D ++TIAA L + F+ P K+ AD R F
Sbjct: 719 MPVEPHIGKMILFGALLGCLDPVLTIAASLSFKDP-FFIPLGKEKIADQRRKMFSQNSRS 777
Query: 524 DRIALLRVYNCWRECN-----YSTEWCRENYIQVSSMKRARDIRDQ 564
D ++++ + W + + E+C +N++ ++++ ++++ Q
Sbjct: 778 DHLSIVNAFLGWEDAKRQGSRFEREYCWDNFLSANTLQMLQNMKGQ 823
Score = 234 (87.4 bits), Expect = 3.4e-56, Sum P(3) = 3.4e-56
Identities = 53/131 (40%), Positives = 81/131 (61%)
Query: 103 EPRWVAAMSVAARVSQEMGVKLGH--EVGYSIRFEDCTSDKT-VLKYMTDCMLLREIVIE 159
+PR ++A+SVA RV+ E +G GY IR + K L Y T ++L+ + +
Sbjct: 276 QPRRISAISVAERVAVERAEPVGEGKSCGYQIRLQSRLPRKQGSLLYCTTGVILQWLHSD 335
Query: 160 PSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAP 219
P L S + L++DE ER++ +D L ++KDL+ R DLK+++ SATL+AEKFS YF + P
Sbjct: 336 PYLSSITHLVLDEIHERSVQSDILITIVKDLLTARDDLKVVLMSATLNAEKFSKYFNNCP 395
Query: 220 IFKIPGRRYPV 230
+ IPG +PV
Sbjct: 396 MIHIPGYTFPV 406
Score = 118 (46.6 bits), Expect = 3.4e-56, Sum P(3) = 3.4e-56
Identities = 30/87 (34%), Positives = 48/87 (55%)
Query: 18 EIEDKIVDFFSESVFDGDNFDE-FESELPNKSVVKSTLEMLQEERKTLPIYPFWEELLQA 76
E+ + +++ + V DE + + K + +EML+ RK LP Y EEL++
Sbjct: 174 ELNETNLEYLLQDVVQIPFLDEELKKDQQKKEDNAAYIEMLKF-RKKLPSYGMREELVRL 232
Query: 77 VSGYPVLAIVGETGSGKTTQIPQYLYE 103
+S VL I GETG GKTTQ+ Q++ +
Sbjct: 233 ISANRVLVISGETGCGKTTQVTQFILD 259
>UNIPROTKB|Q08DS9 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104421 CTD:79665
OMA:LYGSMPT EMBL:DAAA02048338 EMBL:BC123581 IPI:IPI00715479
RefSeq:NP_001070365.1 UniGene:Bt.63706 Ensembl:ENSBTAT00000023753
GeneID:533484 KEGG:bta:533484 InParanoid:Q08DS9 NextBio:20876051
Uniprot:Q08DS9
Length = 779
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 138/404 (34%), Positives = 216/404 (53%)
Query: 192 NYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPV-ELFYTKAPEVD-----YIEA 245
N + LK+++ SAT++ K S +FG+ PIF IPGR YPV E F D YI+A
Sbjct: 199 NRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQA 258
Query: 246 AIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLG-------TKIAELIICPI 298
+ + IH+NE GDILVFLTGQ EIE++ E+L Q + T + L+I P
Sbjct: 259 IVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPC 318
Query: 299 YANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGME 358
Y ++ T+ Q +IF P P RK V++TNI+ TSLTIDGI+YV+ GF K ++NP+ G++
Sbjct: 319 YGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLD 378
Query: 359 SLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHR-----IWMTILCQKYNELIWKM 413
L V PISK+ A QR+G + RT GKCFR+Y+ +++ + I ++ +
Sbjct: 379 ILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTL 438
Query: 414 LSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKT 473
L + ++ F ++DPP A++++G +TR+G M EFP+ P L+
Sbjct: 439 KCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCA 498
Query: 474 IVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHL----GDVGDRIALL 529
++ C D ++ IAAML V N +F RP D + + + + L G D L
Sbjct: 499 VIKAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLA 557
Query: 530 RVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVE 573
++ + WC++++I + A + QL L +++
Sbjct: 558 VIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLK 601
Score = 523 (189.2 bits), Expect = 4.9e-52, Sum P(2) = 4.9e-52
Identities = 121/250 (48%), Positives = 161/250 (64%)
Query: 59 EERKTLPIYPFWEE---LLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------------ 103
+E T P +P ++ L+QAV L + G TGSGKTTQ+P+YLYE
Sbjct: 45 QEGGTTPTFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVT 104
Query: 104 -PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
PR VAA+SVA RV++EM LG +VGY +RF+DC+S +T +KYMTD LL+ I+ +P+L
Sbjct: 105 QPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNL 164
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLI-----NYRPDLKLLISSATLDAEKFSDYFGS 217
+SV+I+DEA ERTL+TD LFGLLK L N + LK+++ SAT++ K S +FG+
Sbjct: 165 TKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGN 224
Query: 218 APIFKIPGRRYPV-ELFYTKAPEVD-----YIEAAIVTALQIHVNEPTGDILVFLTGQDE 271
PIF IPGR YPV E F D YI+A + + IH+NE GDILVFLTGQ E
Sbjct: 225 CPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFE 284
Query: 272 IERAEEILKQ 281
IE++ E+L Q
Sbjct: 285 IEKSCELLFQ 294
Score = 40 (19.1 bits), Expect = 4.9e-52, Sum P(2) = 4.9e-52
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 288 TKIAELIICPIYANLPTELQAKIFE 312
TK+ I+CPI +L K+ E
Sbjct: 677 TKVYARIVCPIRYEWVRDLLPKLHE 701
>UNIPROTKB|E2RPC8 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03006584 EMBL:AAEX03006585
Ensembl:ENSCAFT00000027962 Uniprot:E2RPC8
Length = 781
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 138/404 (34%), Positives = 216/404 (53%)
Query: 192 NYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPV-ELFYTKAPEVD-----YIEA 245
N + LK+++ SAT++ K S +FG+ PIF IPGR YPV E F D YI+A
Sbjct: 199 NRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQA 258
Query: 246 AIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLG-------TKIAELIICPI 298
+ + IH+NE GDILVFLTGQ EIE++ E+L Q + T + L+I P
Sbjct: 259 IVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPC 318
Query: 299 YANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGME 358
Y ++ T+ Q +IF P P RK V++TNI+ TSLTIDGI+YV+ GF K ++NP+ G++
Sbjct: 319 YGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLD 378
Query: 359 SLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHR-----IWMTILCQKYNELIWKM 413
L V PISK+ A QR+G + RT GKCFR+Y+ +++ + I ++ +
Sbjct: 379 ILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTL 438
Query: 414 LSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKT 473
L + ++ F ++DPP A++++G +TR+G M EFP+ P L+
Sbjct: 439 KCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCA 498
Query: 474 IVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHL----GDVGDRIALL 529
++ C D ++ IAAML V N +F RP D + + + + L G D L
Sbjct: 499 VIKAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLA 557
Query: 530 RVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVE 573
++ + WC++++I + A + QL L +++
Sbjct: 558 VIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLK 601
Score = 523 (189.2 bits), Expect = 5.1e-52, Sum P(2) = 5.1e-52
Identities = 121/250 (48%), Positives = 161/250 (64%)
Query: 59 EERKTLPIYPFWEE---LLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------------ 103
+E T P +P ++ L+QAV L + G TGSGKTTQ+P+YLYE
Sbjct: 45 QEGGTTPTFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVT 104
Query: 104 -PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
PR VAA+SVA RV++EM LG +VGY +RF+DC+S +T +KYMTD LL+ I+ +P+L
Sbjct: 105 QPRKVAAISVAQRVAEEMKCALGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNL 164
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLI-----NYRPDLKLLISSATLDAEKFSDYFGS 217
+SV+I+DEA ERTL+TD LFGLLK L N + LK+++ SAT++ K S +FG+
Sbjct: 165 TKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGN 224
Query: 218 APIFKIPGRRYPV-ELFYTKAPEVD-----YIEAAIVTALQIHVNEPTGDILVFLTGQDE 271
PIF IPGR YPV E F D YI+A + + IH+NE GDILVFLTGQ E
Sbjct: 225 CPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFE 284
Query: 272 IERAEEILKQ 281
IE++ E+L Q
Sbjct: 285 IEKSCELLFQ 294
Score = 40 (19.1 bits), Expect = 5.1e-52, Sum P(2) = 5.1e-52
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 288 TKIAELIICPIYANLPTELQAKIFE 312
TK+ I+CPI +L K+ E
Sbjct: 677 TKVYARIVCPIRYEWVRDLLPKLHE 701
>UNIPROTKB|F1S235 [details] [associations]
symbol:LOC100519272 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:CU694896
RefSeq:XP_003131712.1 Ensembl:ENSSSCT00000019229 GeneID:100519272
KEGG:ssc:100519272 Uniprot:F1S235
Length = 779
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 138/404 (34%), Positives = 216/404 (53%)
Query: 192 NYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPV-ELFYTKAPEVD-----YIEA 245
N + LK+++ SAT++ K S +FG+ PIF IPGR YPV E F D YI+A
Sbjct: 199 NRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQA 258
Query: 246 AIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLG-------TKIAELIICPI 298
+ + IH+NE GDILVFLTGQ EIE++ E+L Q + T + L+I P
Sbjct: 259 IVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPC 318
Query: 299 YANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGME 358
Y ++ T+ Q +IF P P RK V++TNI+ TSLTIDGI+YV+ GF K ++NP+ G++
Sbjct: 319 YGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLD 378
Query: 359 SLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHR-----IWMTILCQKYNELIWKM 413
L V PISK+ A QR+G + RT GKCFR+Y+ +++ + I ++ +
Sbjct: 379 ILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTL 438
Query: 414 LSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKT 473
L + ++ F ++DPP A++++G +TR+G M EFP+ P L+
Sbjct: 439 KCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCA 498
Query: 474 IVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHL----GDVGDRIALL 529
++ C D ++ IAAML V N +F RP D + + + + L G D L
Sbjct: 499 VIKAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLA 557
Query: 530 RVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVE 573
++ + WC++++I + A + QL L +++
Sbjct: 558 VIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLK 601
Score = 523 (189.2 bits), Expect = 4.9e-52, Sum P(2) = 4.9e-52
Identities = 121/250 (48%), Positives = 161/250 (64%)
Query: 59 EERKTLPIYPFWEE---LLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------------ 103
+E T P +P ++ L+QAV L + G TGSGKTTQ+P+YLYE
Sbjct: 45 QEGGTTPTFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVT 104
Query: 104 -PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
PR VAA+SVA RV++EM LG +VGY +RF+DC+S +T +KYMTD LL+ I+ +P+L
Sbjct: 105 QPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNL 164
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLI-----NYRPDLKLLISSATLDAEKFSDYFGS 217
+SV+I+DEA ERTL+TD LFGLLK L N + LK+++ SAT++ K S +FG+
Sbjct: 165 TKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGN 224
Query: 218 APIFKIPGRRYPV-ELFYTKAPEVD-----YIEAAIVTALQIHVNEPTGDILVFLTGQDE 271
PIF IPGR YPV E F D YI+A + + IH+NE GDILVFLTGQ E
Sbjct: 225 CPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFE 284
Query: 272 IERAEEILKQ 281
IE++ E+L Q
Sbjct: 285 IEKSCELLFQ 294
Score = 40 (19.1 bits), Expect = 4.9e-52, Sum P(2) = 4.9e-52
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 288 TKIAELIICPIYANLPTELQAKIFE 312
TK+ I+CPI +L K+ E
Sbjct: 677 TKVYARIVCPIRYEWVRDLLPKLHE 701
>UNIPROTKB|Q8IX18 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOVERGEN:HBG039428 EMBL:AF461690 EMBL:AF260270
EMBL:AK025713 EMBL:AK095681 EMBL:BC024187 EMBL:AL832510
EMBL:AF319521 IPI:IPI00410110 IPI:IPI00797226 IPI:IPI01010408
RefSeq:NP_001159773.1 RefSeq:NP_078888.4 UniGene:Hs.29403
ProteinModelPortal:Q8IX18 SMR:Q8IX18 IntAct:Q8IX18 STRING:Q8IX18
PhosphoSite:Q8IX18 DMDM:116247771 PaxDb:Q8IX18 PRIDE:Q8IX18
DNASU:79665 Ensembl:ENST00000251241 GeneID:79665 KEGG:hsa:79665
UCSC:uc002ixn.2 CTD:79665 GeneCards:GC17P057642 HGNC:HGNC:18018
HPA:HPA044350 MIM:607570 neXtProt:NX_Q8IX18 PharmGKB:PA27227
InParanoid:Q8IX18 OMA:LYGSMPT PhylomeDB:Q8IX18 ChiTaRS:DHX40
GenomeRNAi:79665 NextBio:68866 ArrayExpress:Q8IX18 Bgee:Q8IX18
CleanEx:HS_DHX40 Genevestigator:Q8IX18 GermOnline:ENSG00000108406
Uniprot:Q8IX18
Length = 779
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 138/404 (34%), Positives = 216/404 (53%)
Query: 192 NYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPV-ELFYTKAPEVD-----YIEA 245
N + LK+++ SAT++ K S +FG+ PIF IPGR YPV E F D YI+A
Sbjct: 199 NRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQA 258
Query: 246 AIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLG-------TKIAELIICPI 298
+ + IH+NE GDILVFLTGQ EIE++ E+L Q + T + L+I P
Sbjct: 259 IVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPC 318
Query: 299 YANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGME 358
Y ++ T+ Q +IF P P RK V++TNI+ TSLTIDGI+YV+ GF K ++NP+ G++
Sbjct: 319 YGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLD 378
Query: 359 SLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHR-----IWMTILCQKYNELIWKM 413
L V PISK+ A QR+G + RT GKCFR+Y+ +++ + I ++ +
Sbjct: 379 ILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTL 438
Query: 414 LSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKT 473
L + ++ F ++DPP A++++G +TR+G M EFP+ P L+
Sbjct: 439 KCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCA 498
Query: 474 IVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHL----GDVGDRIALL 529
++ C D ++ IAAML V N +F RP D + + + + L G D L
Sbjct: 499 VIKAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLA 557
Query: 530 RVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVE 573
++ + WC++++I + A + QL L +++
Sbjct: 558 VIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLK 601
Score = 521 (188.5 bits), Expect = 8.3e-52, Sum P(2) = 8.3e-52
Identities = 120/250 (48%), Positives = 161/250 (64%)
Query: 59 EERKTLPIYPFWEE---LLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------------ 103
+E T P +P ++ ++QAV L + G TGSGKTTQ+P+YLYE
Sbjct: 45 QEGGTTPTFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVT 104
Query: 104 -PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
PR VAA+SVA RV++EM LG +VGY +RF+DC+S +T +KYMTD LL+ I+ +P+L
Sbjct: 105 QPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNL 164
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLI-----NYRPDLKLLISSATLDAEKFSDYFGS 217
+SV+I+DEA ERTL+TD LFGLLK L N + LK+++ SAT++ K S +FG+
Sbjct: 165 TKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGN 224
Query: 218 APIFKIPGRRYPV-ELFYTKAPEVD-----YIEAAIVTALQIHVNEPTGDILVFLTGQDE 271
PIF IPGR YPV E F D YI+A + + IH+NE GDILVFLTGQ E
Sbjct: 225 CPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFE 284
Query: 272 IERAEEILKQ 281
IE++ E+L Q
Sbjct: 285 IEKSCELLFQ 294
Score = 40 (19.1 bits), Expect = 8.3e-52, Sum P(2) = 8.3e-52
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 288 TKIAELIICPIYANLPTELQAKIFE 312
TK+ I+CPI +L K+ E
Sbjct: 677 TKVYARIVCPIRYEWVRDLLPKLHE 701
>UNIPROTKB|C9JR60 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
RefSeq:NP_001159773.1 UniGene:Hs.29403 GeneID:79665 KEGG:hsa:79665
CTD:79665 HGNC:HGNC:18018 ChiTaRS:DHX40 OrthoDB:EOG48PMJH
EMBL:AC091271 EMBL:AC004167 IPI:IPI00952676
ProteinModelPortal:C9JR60 STRING:C9JR60 Ensembl:ENST00000425628
ArrayExpress:C9JR60 Uniprot:C9JR60
Length = 702
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 138/404 (34%), Positives = 216/404 (53%)
Query: 192 NYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPV-ELFYTKAPEVD-----YIEA 245
N + LK+++ SAT++ K S +FG+ PIF IPGR YPV E F D YI+A
Sbjct: 122 NRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQA 181
Query: 246 AIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLG-------TKIAELIICPI 298
+ + IH+NE GDILVFLTGQ EIE++ E+L Q + T + L+I P
Sbjct: 182 IVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPC 241
Query: 299 YANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGME 358
Y ++ T+ Q +IF P P RK V++TNI+ TSLTIDGI+YV+ GF K ++NP+ G++
Sbjct: 242 YGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLD 301
Query: 359 SLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHR-----IWMTILCQKYNELIWKM 413
L V PISK+ A QR+G + RT GKCFR+Y+ +++ + I ++ +
Sbjct: 302 ILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTL 361
Query: 414 LSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKT 473
L + ++ F ++DPP A++++G +TR+G M EFP+ P L+
Sbjct: 362 KCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCA 421
Query: 474 IVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHL----GDVGDRIALL 529
++ C D ++ IAAML V N +F RP D + + + + L G D L
Sbjct: 422 VIKAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLA 480
Query: 530 RVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVE 573
++ + WC++++I + A + QL L +++
Sbjct: 481 VIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLK 524
Score = 333 (122.3 bits), Expect = 6.4e-27, Sum P(2) = 6.4e-27
Identities = 76/152 (50%), Positives = 101/152 (66%)
Query: 141 KTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLI-----NYRP 195
+T +KYMTD LL+ I+ +P+L +SV+I+DEA ERTL+TD LFGLLK L N +
Sbjct: 66 ETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKE 125
Query: 196 DLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPV-ELFYTKAPEVD-----YIEAAIVT 249
LK+++ SAT++ K S +FG+ PIF IPGR YPV E F D YI+A +
Sbjct: 126 HLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKV 185
Query: 250 ALQIHVNEPTGDILVFLTGQDEIERAEEILKQ 281
+ IH+NE GDILVFLTGQ EIE++ E+L Q
Sbjct: 186 TMDIHLNEMAGDILVFLTGQFEIEKSCELLFQ 217
Score = 40 (19.1 bits), Expect = 6.4e-27, Sum P(2) = 6.4e-27
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 288 TKIAELIICPIYANLPTELQAKIFE 312
TK+ I+CPI +L K+ E
Sbjct: 600 TKVYARIVCPIRYEWVRDLLPKLHE 624
>RGD|1359618 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1359618 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT
OrthoDB:EOG48PMJH EMBL:BC083821 IPI:IPI00369962
RefSeq:NP_001005873.1 UniGene:Rn.29182 ProteinModelPortal:Q5XI69
PhosphoSite:Q5XI69 Ensembl:ENSRNOT00000006926 GeneID:287595
KEGG:rno:287595 InParanoid:Q5XI69 NextBio:626568
ArrayExpress:Q5XI69 Genevestigator:Q5XI69
GermOnline:ENSRNOG00000004549 Uniprot:Q5XI69
Length = 779
Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
Identities = 138/404 (34%), Positives = 216/404 (53%)
Query: 192 NYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPV-ELFYTKAPEVD-----YIEA 245
N + LK+++ SAT++ K S +FG+ PIF IPGR YPV E F D YI+A
Sbjct: 199 NRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQA 258
Query: 246 AIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLG-------TKIAELIICPI 298
+ + IH+NE GDILVFLTGQ EIE++ E+L Q + T + L+I P
Sbjct: 259 IVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPC 318
Query: 299 YANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGME 358
Y ++ T+ Q +IF P P RK V++TNI+ TSLTIDGI+YV+ GF K ++NP+ G++
Sbjct: 319 YGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLD 378
Query: 359 SLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHR-----IWMTILCQKYNELIWKM 413
L V PISK+ A QR+G + RT GKCFR+Y+ +++ + I ++ +
Sbjct: 379 ILEVVPISKSEALQRSGRAGRTASGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTL 438
Query: 414 LSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKT 473
L + ++ F ++DPP A++++G +TR+G M EFP+ P L+
Sbjct: 439 KCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCA 498
Query: 474 IVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHL----GDVGDRIALL 529
++ C D ++ IAAML V N +F RP D + + + + L G D L
Sbjct: 499 VIRAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEAEQKHRELAAKAGGFNDFATLA 557
Query: 530 RVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVE 573
++ + WC++++I + A + QL L +++
Sbjct: 558 VIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLK 601
Score = 524 (189.5 bits), Expect = 3.6e-52, Sum P(2) = 3.6e-52
Identities = 121/250 (48%), Positives = 161/250 (64%)
Query: 59 EERKTLPIYPFWEE---LLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------------ 103
+E T P +P ++ L+QAV L + G TGSGKTTQ+P+YLYE
Sbjct: 45 QEGGTTPTFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVT 104
Query: 104 -PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
PR VAA+SVA RV++EM LG +VGY +RF+DC+S +T +KYMTD LL+ I+ +P+L
Sbjct: 105 QPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNL 164
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLI-----NYRPDLKLLISSATLDAEKFSDYFGS 217
+SV+I+DEA ERTL+TD LFGLLK L N + LK+++ SAT++ K S +FG+
Sbjct: 165 NKFSVIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGN 224
Query: 218 APIFKIPGRRYPV-ELFYTKAPEVD-----YIEAAIVTALQIHVNEPTGDILVFLTGQDE 271
PIF IPGR YPV E F D YI+A + + IH+NE GDILVFLTGQ E
Sbjct: 225 CPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFE 284
Query: 272 IERAEEILKQ 281
IE++ E+L Q
Sbjct: 285 IEKSCELLFQ 294
Score = 40 (19.1 bits), Expect = 3.6e-52, Sum P(2) = 3.6e-52
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 288 TKIAELIICPIYANLPTELQAKIFE 312
TK+ I+CPI +L K+ E
Sbjct: 677 TKVYARIVCPIRYEWVRDLLPKLHE 701
>MGI|MGI:1914737 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:1914737
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL592222 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT EMBL:AK004610
EMBL:AK010512 EMBL:AK031000 EMBL:AK075991 EMBL:AL596111
EMBL:BC058276 IPI:IPI00453964 RefSeq:NP_080467.3 UniGene:Mm.260627
ProteinModelPortal:Q6PE54 SMR:Q6PE54 STRING:Q6PE54
PhosphoSite:Q6PE54 PaxDb:Q6PE54 PRIDE:Q6PE54
Ensembl:ENSMUST00000018569 GeneID:67487 KEGG:mmu:67487
UCSC:uc007ktc.1 InParanoid:Q6PE54 OrthoDB:EOG48PMJH NextBio:324718
Bgee:Q6PE54 CleanEx:MM_DHX40 Genevestigator:Q6PE54
GermOnline:ENSMUSG00000018425 Uniprot:Q6PE54
Length = 779
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 138/404 (34%), Positives = 215/404 (53%)
Query: 192 NYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPV-ELFYTKAPEVD-----YIEA 245
N + LK+++ SAT++ K S +FG+ PIF IPGR YPV E F D YI+A
Sbjct: 199 NRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQA 258
Query: 246 AIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLG-------TKIAELIICPI 298
+ + IH+NE GDILVFLTGQ EIE++ E+L Q + T + L+I P
Sbjct: 259 IVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPC 318
Query: 299 YANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGME 358
Y ++ T+ Q +IF P P RK V++TNI+ TSLTIDGI+YV+ GF K ++NP+ G++
Sbjct: 319 YGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLD 378
Query: 359 SLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHR-----IWMTILCQKYNELIWKM 413
L V PISK+ A QR+G + RT GKCFR+Y+ + + + I ++ +
Sbjct: 379 ILEVVPISKSEALQRSGRAGRTASGKCFRIYSKEFWSQCMPDHVIPEIKRTSLTSVVLTL 438
Query: 414 LSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKT 473
L + ++ F ++DPP A++++G +TR+G M EFP+ P L+
Sbjct: 439 KCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCA 498
Query: 474 IVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHL----GDVGDRIALL 529
++ C D ++ IAAML V N +F RP D + + + + L G D L
Sbjct: 499 VIRAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLA 557
Query: 530 RVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVE 573
++ + WC++++I + A + QL L +++
Sbjct: 558 VIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLK 601
Score = 524 (189.5 bits), Expect = 3.6e-52, Sum P(2) = 3.6e-52
Identities = 121/250 (48%), Positives = 161/250 (64%)
Query: 59 EERKTLPIYPFWEE---LLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------------ 103
+E T P +P ++ L+QAV L + G TGSGKTTQ+P+YLYE
Sbjct: 45 QEGGTTPTFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVT 104
Query: 104 -PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
PR VAA+SVA RV++EM LG +VGY +RF+DC+S +T +KYMTD LL+ I+ +P+L
Sbjct: 105 QPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNL 164
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLI-----NYRPDLKLLISSATLDAEKFSDYFGS 217
+SV+I+DEA ERTL+TD LFGLLK L N + LK+++ SAT++ K S +FG+
Sbjct: 165 SKFSVIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGN 224
Query: 218 APIFKIPGRRYPV-ELFYTKAPEVD-----YIEAAIVTALQIHVNEPTGDILVFLTGQDE 271
PIF IPGR YPV E F D YI+A + + IH+NE GDILVFLTGQ E
Sbjct: 225 CPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFE 284
Query: 272 IERAEEILKQ 281
IE++ E+L Q
Sbjct: 285 IEKSCELLFQ 294
Score = 40 (19.1 bits), Expect = 3.6e-52, Sum P(2) = 3.6e-52
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 288 TKIAELIICPIYANLPTELQAKIFE 312
TK+ I+CPI +L K+ E
Sbjct: 677 TKVYARIVCPIRYEWVRDLLPKLHE 701
>UNIPROTKB|J9NVQ3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AAEX03006584
EMBL:AAEX03006585 Ensembl:ENSCAFT00000048714 Uniprot:J9NVQ3
Length = 857
Score = 578 (208.5 bits), Expect = 9.1e-56, P = 9.1e-56
Identities = 138/404 (34%), Positives = 216/404 (53%)
Query: 192 NYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPV-ELFYTKAPEVD-----YIEA 245
N + LK+++ SAT++ K S +FG+ PIF IPGR YPV E F D YI+A
Sbjct: 277 NRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQA 336
Query: 246 AIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLG-------TKIAELIICPI 298
+ + IH+NE GDILVFLTGQ EIE++ E+L Q + T + L+I P
Sbjct: 337 IVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPC 396
Query: 299 YANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGME 358
Y ++ T+ Q +IF P P RK V++TNI+ TSLTIDGI+YV+ GF K ++NP+ G++
Sbjct: 397 YGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLD 456
Query: 359 SLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHR-----IWMTILCQKYNELIWKM 413
L V PISK+ A QR+G + RT GKCFR+Y+ +++ + I ++ +
Sbjct: 457 ILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTL 516
Query: 414 LSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKT 473
L + ++ F ++DPP A++++G +TR+G M EFP+ P L+
Sbjct: 517 KCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCA 576
Query: 474 IVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHL----GDVGDRIALL 529
++ C D ++ IAAML V N +F RP D + + + + L G D L
Sbjct: 577 VIKAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLA 635
Query: 530 RVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVE 573
++ + WC++++I + A + QL L +++
Sbjct: 636 VIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLK 679
Score = 523 (189.2 bits), Expect = 2.1e-51, Sum P(2) = 2.1e-51
Identities = 121/250 (48%), Positives = 161/250 (64%)
Query: 59 EERKTLPIYPFWEE---LLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------------ 103
+E T P +P ++ L+QAV L + G TGSGKTTQ+P+YLYE
Sbjct: 123 QEGGTTPTFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVT 182
Query: 104 -PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
PR VAA+SVA RV++EM LG +VGY +RF+DC+S +T +KYMTD LL+ I+ +P+L
Sbjct: 183 QPRKVAAISVAQRVAEEMKCALGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNL 242
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLI-----NYRPDLKLLISSATLDAEKFSDYFGS 217
+SV+I+DEA ERTL+TD LFGLLK L N + LK+++ SAT++ K S +FG+
Sbjct: 243 TKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGN 302
Query: 218 APIFKIPGRRYPV-ELFYTKAPEVD-----YIEAAIVTALQIHVNEPTGDILVFLTGQDE 271
PIF IPGR YPV E F D YI+A + + IH+NE GDILVFLTGQ E
Sbjct: 303 CPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFE 362
Query: 272 IERAEEILKQ 281
IE++ E+L Q
Sbjct: 363 IEKSCELLFQ 372
Score = 40 (19.1 bits), Expect = 2.1e-51, Sum P(2) = 2.1e-51
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 288 TKIAELIICPIYANLPTELQAKIFE 312
TK+ I+CPI +L K+ E
Sbjct: 755 TKVYARIVCPIRYEWVRDLLPKLHE 779
>UNIPROTKB|F1NWM3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AADN02025787
IPI:IPI00583149 Ensembl:ENSGALT00000008234 Uniprot:F1NWM3
Length = 730
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 137/404 (33%), Positives = 223/404 (55%)
Query: 194 RPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPV-ELFYTKAPEVD-----YIEAAI 247
+ ++K+++ SATL+ +K S++FG + IPGR YPV E+F D Y+ A+
Sbjct: 150 KTEMKVVVMSATLEVDKLSEFFGHCSVLHIPGRSYPVKEIFCNLLSPRDTGSSAYVTEAV 209
Query: 248 VTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTK-------IAELIICPIYA 300
L IH+NEP GDILVFLTGQ EIE+A ++L ++ + + I L+I P+Y
Sbjct: 210 KVTLDIHLNEPEGDILVFLTGQIEIEKACDLLFKKAESIDYRYEVHDRSIEGLLILPLYG 269
Query: 301 NLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESL 360
++ T+ Q +IF P P+ RK V++TNIA TSLTI+G++YV+ GF K ++NP+ G++ L
Sbjct: 270 SMSTDQQKRIFLPAPKGIRKCVVSTNIAATSLTIEGVRYVVDSGFVKQLNHNPRVGLDIL 329
Query: 361 LVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIWM--TILCQKYNELIWKMLSL-- 416
V PISK+ A QR G + RT GK +RLY+ + + T+ K L +L+L
Sbjct: 330 EVVPISKSEAMQRAGRAGRTSSGKSYRLYSTEFWEQCMPDHTVPEIKRTSLTSVILTLKC 389
Query: 417 FS-NVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKA--GQLTRVGRQMAEFPIDPKLSKT 473
S + ++ F ++D P A+++ G +TR+G + +FP+ P LS
Sbjct: 390 LSVHDVIRFPYLDRPEERHILEALKQLYQCDAIDRTRRGHVTRLGEFLVQFPLPPNLSCA 449
Query: 474 IVSLDKYKCSDEIITIAAMLFVGNSIFYRPKD--KQIYAD--NARMNFHLGDVGDRIALL 529
++ C D ++ IAAML V N +F RP D KQ A+ + ++ +G D LL
Sbjct: 450 VIKAASLDCEDMLLPIAAMLSVEN-VFIRPGDPQKQKEAELQHQELSSQVGGCNDFATLL 508
Query: 530 RVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVE 573
++ + + WC + +I ++K A + QL + ++++
Sbjct: 509 NIFEQCKASKSPSAWCHKYWIHWRAVKSALSVEKQLREITSKLK 552
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 120/248 (48%), Positives = 161/248 (64%)
Query: 64 LPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE-------------PRWVAAM 110
LPI L++AVS P L + GETGSGK+TQ+P+YLYE PR VA +
Sbjct: 1 LPIRRHRRALVRAVSERPFLIVTGETGSGKSTQLPKYLYEAGLAQHGAIGVTQPRRVATI 60
Query: 111 SVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIV 170
SVA RV++EMG LG VGY +RF+DC+S++T +KYMTD LLR I+ +P L YS++I+
Sbjct: 61 SVAQRVAEEMGCALGSVVGYQVRFDDCSSEETAIKYMTDGCLLRHILADPLLSKYSIIIL 120
Query: 171 DEAQERTLSTDNLFGLLKDLI--NYRP----DLKLLISSATLDAEKFSDYFGSAPIFKIP 224
DEA ER+LSTD LFGLLK L N P ++K+++ SATL+ +K S++FG + IP
Sbjct: 121 DEAHERSLSTDILFGLLKKLFLQNKPPGRKTEMKVVVMSATLEVDKLSEFFGHCSVLHIP 180
Query: 225 GRRYPV-ELFYTKAPEVD-----YIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEI 278
GR YPV E+F D Y+ A+ L IH+NEP GDILVFLTGQ EIE+A ++
Sbjct: 181 GRSYPVKEIFCNLLSPRDTGSSAYVTEAVKVTLDIHLNEPEGDILVFLTGQIEIEKACDL 240
Query: 279 LKQRTRGL 286
L ++ +
Sbjct: 241 LFKKAESI 248
>FB|FBgn0001330 [details] [associations]
symbol:kz "kurz" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0022008 EMBL:AE014298
GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AL009195 GeneTree:ENSGT00550000074985 KO:K14780
OMA:AKLQPRT EMBL:X64418 PIR:T13424 RefSeq:NP_476591.1 UniGene:Dm.33
ProteinModelPortal:O46072 SMR:O46072 STRING:O46072 PaxDb:O46072
PRIDE:O46072 EnsemblMetazoa:FBtr0070419 GeneID:31205
KEGG:dme:Dmel_CG3228 UCSC:CG3228-RA CTD:31205 FlyBase:FBgn0001330
InParanoid:O46072 OrthoDB:EOG4SN03P PhylomeDB:O46072
GenomeRNAi:31205 NextBio:772445 Bgee:O46072 GermOnline:CG3228
Uniprot:O46072
Length = 1192
Score = 389 (142.0 bits), Expect = 1.4e-55, Sum P(2) = 1.4e-55
Identities = 98/253 (38%), Positives = 146/253 (57%)
Query: 50 VKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------ 103
V T E+ Q R LPI +++++ ++ P++ + GETGSGKTTQ+PQ+LYE
Sbjct: 247 VHRTTEV-QNARLRLPILAEEQQVMETINENPIVIVAGETGSGKTTQLPQFLYEAGYAQH 305
Query: 104 -------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREI 156
PR VAA++++ RV+ EM + EV Y IRFE + T +K+MTD +LL+EI
Sbjct: 306 KMIGVTEPRRVAAIAMSKRVAHEMNLPES-EVSYLIRFEGNVTPATRIKFMTDGVLLKEI 364
Query: 157 VIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYR----PDLKLLISSATLDAEKFS 212
+ L YSV+I+DEA ER++ TD L GLL ++ R LKL+I SATL F+
Sbjct: 365 ETDFLLSKYSVIILDEAHERSVYTDILVGLLSRIVPLRHKRGQPLKLIIMSATLRVSDFT 424
Query: 213 D---YFG-SAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTG 268
+ F P+ K+ R++PV + + K DY+ A L+IH P G IL+F+TG
Sbjct: 425 ENTRLFKIPPPLLKVEARQFPVTIHFQKRTPDDYVAEAYRKTLKIHNKLPEGGILIFVTG 484
Query: 269 QDEIERAEEILKQ 281
Q E+ + L++
Sbjct: 485 QQEVNQLVRKLRR 497
Score = 256 (95.2 bits), Expect = 1.4e-55, Sum P(2) = 1.4e-55
Identities = 73/239 (30%), Positives = 118/239 (49%)
Query: 271 EIERAEEILKQRTRGLGTKIAE-LIICPIYANLPTELQAKIFEPTPERARKVVLATNIAE 329
E + +E+ + G+G+ + L + P+Y+ L +E Q +IF P P+ R V++TN+AE
Sbjct: 594 EEDNDDELGLEDESGMGSGQRQPLWVLPLYSLLSSEKQNRIFLPVPDGCRLCVVSTNVAE 653
Query: 330 TSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLY 389
TSLTI IKYV+ G K + Y+ TG+ + +V SKASA+QR G + R G C+RLY
Sbjct: 654 TSLTIPHIKYVVDCGRQKTRLYDKLTGVSAFVVTYTSKASADQRAGRAGRISAGHCYRLY 713
Query: 390 TLHNYHRIWMTIL---CQK--YNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXX 444
+ Y+ + QK +L+ +M + + +V+F F PP
Sbjct: 714 SSAVYNDCFEDFSQPDIQKKPVEDLMLQMRCMGIDRVVHFPFPSPPDQVQLQAAERRLIV 773
Query: 445 XGALNKAGQ--------LTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFV 495
GAL A +TR+G ++ FP+ P+ K + + + + A L V
Sbjct: 774 LGALEVAKTENTDLPPAVTRLGHVISRFPVAPRFGKMLALSHQQNLLPYTVCLVAALSV 832
Score = 58 (25.5 bits), Expect = 9.2e-35, Sum P(2) = 9.2e-35
Identities = 29/128 (22%), Positives = 51/128 (39%)
Query: 454 LTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYR--PKDKQIYAD 511
+TR+G ++ FP+ P+ K + + + + A L V + +D+ + A
Sbjct: 791 VTRLGHVISRFPVAPRFGKMLALSHQQNLLPYTVCLVAALSVQEVLIETGVQRDEDV-AP 849
Query: 512 NARMNFHL--------GD---VGDRIALLRVYNCWRECNYS---TEWCRENYIQVSSMKR 557
A FH G+ +GD + LLR E+C N ++ +M
Sbjct: 850 GAN-RFHRKRQSWAASGNYQLLGDPMVLLRAVGAAEYAGSQGRLPEFCAANGLRQKAMSE 908
Query: 558 ARDIRDQL 565
R +R QL
Sbjct: 909 VRKLRVQL 916
>TAIR|locus:504954904 [details] [associations]
symbol:ABO6 "ABA overly sensitive 6" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 EMBL:AB005245 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 EMBL:AB008271 HOGENOM:HOG000247063
KO:K14442 EMBL:AB025625 IPI:IPI00533344 RefSeq:NP_680142.2
UniGene:At.45659 ProteinModelPortal:Q9FF84 SMR:Q9FF84 PaxDb:Q9FF84
PRIDE:Q9FF84 EnsemblPlants:AT5G04895.1 GeneID:830371
KEGG:ath:AT5G04895 TAIR:At5g04895 InParanoid:Q9FF84 OMA:MRAGHSP
PhylomeDB:Q9FF84 ProtClustDB:CLSN2680421 Genevestigator:Q9FF84
Uniprot:Q9FF84
Length = 1161
Score = 373 (136.4 bits), Expect = 2.7e-55, Sum P(2) = 2.7e-55
Identities = 102/336 (30%), Positives = 168/336 (50%)
Query: 241 DYIEAAIVTALQIHV--NEPTGDILVFLTGQDEIERAEEILKQRTR-GLGTKIAELIICP 297
D I ++ A+ H+ E G +LVFLTG D+I + +K G ++ L++C
Sbjct: 519 DCIGFNLIEAVLCHICRKERPGAVLVFLTGWDDIRSLSDQIKAHPLLGDPNRVL-LLMC- 576
Query: 298 IYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGM 357
+ ++ T Q IFE P RK+VLATN+AE S+TI+ + +V+ G AK +Y+
Sbjct: 577 -HGSMATAEQRLIFERAPPNIRKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNT 635
Query: 358 ESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRI----WMTILCQKYNELIWKM 413
LL + IS+ASA QR G + R PG+C+ LY Y +L N L ++
Sbjct: 636 PCLLPSWISQASARQRRGRAGRLFPGECYHLYPKCVYDAFAEYQLPELLRTPLNSLCLQI 695
Query: 414 LSLFSNVLVNF--DFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLS 471
SL + F + P GAL++ LT +G+ ++ P+DPKL
Sbjct: 696 KSLQVESIAEFLSAALQAPESLAVQNAIGFLKMIGALDEKENLTDLGKLLSILPVDPKLG 755
Query: 472 KTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRV 531
K ++ ++C D I+TI + L V + F P+DK+ A +A++ F D D +AL+R
Sbjct: 756 KMLIMGAIFRCFDPILTIVSGLSVRDP-FLLPQDKKDLALSAKLRFSAKDYSDHMALVRA 814
Query: 532 YNCWRECNY---STEWCRENYIQVSSMKRARDIRDQ 564
+ W++ + E+C N++ +++ +R Q
Sbjct: 815 FEGWKDAEREGSAYEFCWRNFLSAQTLQAIHSLRKQ 850
Score = 273 (101.2 bits), Expect = 2.7e-55, Sum P(2) = 2.7e-55
Identities = 69/202 (34%), Positives = 105/202 (51%)
Query: 33 DGDNFDEFESELPNKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSG 92
+G EF LP+ K +LQ + I E + P + E SG
Sbjct: 249 EGRTMLEFRKTLPS---FKDKERLLQAIARNQVIVVSGETGCGKTTQLPQYILESEIESG 305
Query: 93 KTTQIPQYLYEPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCML 152
+ +PR ++AM+V+ RVS E G LG VG+ +R E T L + T +L
Sbjct: 306 RGAFCNIICTQPRRISAMAVSERVSAERGEPLGETVGFKVRLEGMRGKNTHLLFCTSGIL 365
Query: 153 LREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFS 212
LR ++ + +L + + VDE ER ++ D L +LK+L+ RPDL+L++ SATL+AE FS
Sbjct: 366 LRRLLSDRNLNGVTHVFVDEIHERGMNEDFLIIVLKELLPRRPDLRLVLMSATLNAELFS 425
Query: 213 DYFGSAPIFKIPGRRYPVELFY 234
+Y+G AP IPG +PV+ +
Sbjct: 426 NYYGGAPTIHIPGFTHPVKAHF 447
>UNIPROTKB|J9PAM3 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
EMBL:AAEX03007702 Ensembl:ENSCAFT00000046695 Uniprot:J9PAM3
Length = 1000
Score = 327 (120.2 bits), Expect = 3.8e-55, Sum P(2) = 3.8e-55
Identities = 78/190 (41%), Positives = 115/190 (60%)
Query: 61 RKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE---------------PR 105
R++LP++ EE+++ + V+ IVGETGSGKTTQIPQ+L + PR
Sbjct: 189 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPR 248
Query: 106 WVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVI-EPSLES 164
+AA++VA RV+ E ++G +GY IR E S KT+L + T+ +LLR ++ + +L +
Sbjct: 249 RLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLST 308
Query: 165 YSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIP 224
+ +IVDE ER +D L L+DL+ P LKL++SSA LD F YFGS P+ I
Sbjct: 309 VTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQ 368
Query: 225 GRRYPV-ELF 233
GR + V E+F
Sbjct: 369 GRPFEVKEMF 378
Score = 322 (118.4 bits), Expect = 3.8e-55, Sum P(2) = 3.8e-55
Identities = 94/322 (29%), Positives = 153/322 (47%)
Query: 260 GDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERAR 319
G IL+FL G DEI + + + + +++N+ T Q K+ + P R
Sbjct: 622 GAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVR 681
Query: 320 KVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSER 379
K++L+TNIAETS+T++ + +VI G K KS++ + L + ISKASA QR G + R
Sbjct: 682 KIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAVQRKGRAGR 741
Query: 380 TGPGKCFRLYTLHNYHRIWMTILCQKYNELIWKMLSLFSNVL--VNF---DFI----DPP 430
PG CFRL++ + + + + + + L L + +L VN DF+ +PP
Sbjct: 742 CRPGICFRLFSRLRFQNM-LEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAPEPP 800
Query: 431 XXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIA 490
A++ LT +G +A+ P++P L K ++ KC D I+TIA
Sbjct: 801 PALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIA 860
Query: 491 AMLFVGNSIFYRPKDKQIYADN-ARMNFHLGDVGDRIALLRVYNCWRECNYSTEW----C 545
L + + Q A R F G D +ALLR + W++ S W C
Sbjct: 861 CTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKAR-SDGWERAFC 919
Query: 546 RENYIQVSSMKRARDIRDQLEG 567
+N++ ++M+ +R QL G
Sbjct: 920 EKNFLSQATMEIIIGMRTQLLG 941
>UNIPROTKB|F1MNU7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 CTD:64848 OMA:RAFWESS EMBL:DAAA02027655
IPI:IPI00689346 RefSeq:NP_001179740.1 UniGene:Bt.24975
ProteinModelPortal:F1MNU7 Ensembl:ENSBTAT00000018745 GeneID:541024
KEGG:bta:541024 NextBio:20878969 Uniprot:F1MNU7
Length = 1429
Score = 327 (120.2 bits), Expect = 7.2e-55, Sum P(2) = 7.2e-55
Identities = 78/190 (41%), Positives = 115/190 (60%)
Query: 61 RKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE---------------PR 105
R++LP++ EE+++ + V+ IVGETGSGKTTQIPQ+L + PR
Sbjct: 189 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPR 248
Query: 106 WVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVI-EPSLES 164
+AA++VA RV+ E ++G +GY IR E S KT+L + T+ +LLR ++ + +L +
Sbjct: 249 RLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLST 308
Query: 165 YSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIP 224
+ +IVDE ER +D L L+DL+ P LKL++SSA LD F YFGS P+ I
Sbjct: 309 VTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQ 368
Query: 225 GRRYPV-ELF 233
GR + V E+F
Sbjct: 369 GRPFEVKEMF 378
Score = 324 (119.1 bits), Expect = 7.2e-55, Sum P(2) = 7.2e-55
Identities = 94/321 (29%), Positives = 153/321 (47%)
Query: 260 GDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERAR 319
G IL+FL G DEI + + + + +++N+ T Q K+ + P R
Sbjct: 622 GAILIFLPGYDEIVGLRDRILFDDKRFAENAHRYQVFMLHSNMQTSDQKKVLKNPPAGVR 681
Query: 320 KVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSER 379
K++L+TNIAETS+T++ + +VI G K KS++ + L + ISKASA QR G + R
Sbjct: 682 KIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 741
Query: 380 TGPGKCFRLYTLHNYHRI--WMT--ILCQKYNELIW--KMLSLFSNVLVNF--DFIDPPX 431
PG CFRL++ + + + T +L EL K+L+ + + +F +PP
Sbjct: 742 CRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCAIADFLMKAPEPPP 801
Query: 432 XXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAA 491
A++ LT +G +A+ P++P L K ++ KC D I+TIA
Sbjct: 802 ALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIAC 861
Query: 492 MLFVGNSIFYRPKDKQIYADN-ARMNFHLGDVGDRIALLRVYNCWRECNYSTEW----CR 546
L + + Q A R F G D +ALLR + W++ S W C
Sbjct: 862 TLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKAR-SDGWERAFCE 920
Query: 547 ENYIQVSSMKRARDIRDQLEG 567
+N++ ++M+ +R QL G
Sbjct: 921 KNFLSQATMEIIIGMRTQLLG 941
Score = 40 (19.1 bits), Expect = 4.6e-25, Sum P(2) = 4.6e-25
Identities = 21/63 (33%), Positives = 27/63 (42%)
Query: 234 YTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAEL 293
Y K P + AAI AL PT D L++ DE+ RA I R T + L
Sbjct: 1013 YKKIPPANGQTAAI-QAL------PT-DWLIY----DEMTRAHRIANIRCCSAVTPVTVL 1060
Query: 294 IIC 296
+ C
Sbjct: 1061 VFC 1063
>MGI|MGI:2448561 [details] [associations]
symbol:Ythdc2 "YTH domain containing 2" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
MGI:MGI:2448561 GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882
CTD:64848 HOGENOM:HOG000155703 OMA:RAFWESS OrthoDB:EOG4JWVCN
EMBL:BC138263 EMBL:BC171951 IPI:IPI00343249 RefSeq:NP_001156485.1
UniGene:Mm.244482 ProteinModelPortal:B2RR83 SMR:B2RR83
PhosphoSite:B2RR83 PaxDb:B2RR83 PRIDE:B2RR83
Ensembl:ENSMUST00000037763 GeneID:240255 KEGG:mmu:240255
UCSC:uc008evb.2 InParanoid:B2RR83 ChiTaRS:YTHDC2 NextBio:384522
Bgee:B2RR83 Genevestigator:B2RR83 Uniprot:B2RR83
Length = 1445
Score = 327 (120.2 bits), Expect = 7.5e-55, Sum P(2) = 7.5e-55
Identities = 78/190 (41%), Positives = 115/190 (60%)
Query: 61 RKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE---------------PR 105
R++LP++ EE+++ + V+ IVGETGSGKTTQIPQ+L + PR
Sbjct: 205 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPR 264
Query: 106 WVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVI-EPSLES 164
+AA++VA RV+ E ++G +GY IR E S KT+L + T+ +LLR ++ + +L +
Sbjct: 265 RLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLST 324
Query: 165 YSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIP 224
+ +IVDE ER +D L L+DL+ P LKL++SSA LD F YFGS P+ I
Sbjct: 325 VTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQ 384
Query: 225 GRRYPV-ELF 233
GR + V E+F
Sbjct: 385 GRPFEVKEMF 394
Score = 324 (119.1 bits), Expect = 7.5e-55, Sum P(2) = 7.5e-55
Identities = 94/321 (29%), Positives = 153/321 (47%)
Query: 260 GDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERAR 319
G IL+FL G DEI + + + + +++N+ T Q K+ + P R
Sbjct: 638 GAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVR 697
Query: 320 KVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSER 379
K++L+TNIAETS+T++ + +VI G K KS++ + L + ISKASA QR G + R
Sbjct: 698 KIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 757
Query: 380 TGPGKCFRLYTLHNYHRI--WMT--ILCQKYNELIW--KMLSLFSNVLVNF--DFIDPPX 431
PG CFRL++ + + + T +L EL K+L+ + + +F +PP
Sbjct: 758 CRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCTIADFLMKAPEPPP 817
Query: 432 XXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAA 491
A++ LT +G +A+ P++P L K ++ KC D I+TIA
Sbjct: 818 ALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIAC 877
Query: 492 MLFVGNSIFYRPKDKQIYADN-ARMNFHLGDVGDRIALLRVYNCWRECNYSTEW----CR 546
L + + Q A R F G D +ALLR + W++ S W C
Sbjct: 878 TLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKAR-SDGWERAFCE 936
Query: 547 ENYIQVSSMKRARDIRDQLEG 567
+N++ ++M+ +R QL G
Sbjct: 937 KNFLSQATMEIIIGMRTQLLG 957
Score = 44 (20.5 bits), Expect = 1.8e-25, Sum P(2) = 1.8e-25
Identities = 20/63 (31%), Positives = 28/63 (44%)
Query: 234 YTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAEL 293
Y K P + +AA + AL PT D L++ DE+ RA I R T + L
Sbjct: 1029 YKKIPPANG-QAAAIQAL------PT-DWLIY----DEMTRAHRIANIRCCSAVTPVTVL 1076
Query: 294 IIC 296
+ C
Sbjct: 1077 VFC 1079
>UNIPROTKB|Q9H6S0 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 EMBL:AC093208 EMBL:AC010389 EMBL:BC137285
EMBL:AK025593 IPI:IPI00010200 RefSeq:NP_073739.3 UniGene:Hs.231942
PDB:2YU6 PDBsum:2YU6 ProteinModelPortal:Q9H6S0 SMR:Q9H6S0
IntAct:Q9H6S0 PhosphoSite:Q9H6S0 DMDM:239938805 PaxDb:Q9H6S0
PeptideAtlas:Q9H6S0 PRIDE:Q9H6S0 Ensembl:ENST00000161863
GeneID:64848 KEGG:hsa:64848 UCSC:uc003kqn.3 CTD:64848
GeneCards:GC05P112877 HGNC:HGNC:24721 HPA:HPA037364
neXtProt:NX_Q9H6S0 PharmGKB:PA134912676 HOGENOM:HOG000155703
HOVERGEN:HBG063891 InParanoid:Q9H6S0 OMA:RAFWESS OrthoDB:EOG4JWVCN
PhylomeDB:Q9H6S0 EvolutionaryTrace:Q9H6S0 GenomeRNAi:64848
NextBio:66962 ArrayExpress:Q9H6S0 Bgee:Q9H6S0 CleanEx:HS_YTHDC2
Genevestigator:Q9H6S0 GermOnline:ENSG00000047188 Uniprot:Q9H6S0
Length = 1430
Score = 327 (120.2 bits), Expect = 1.9e-54, Sum P(2) = 1.9e-54
Identities = 78/190 (41%), Positives = 115/190 (60%)
Query: 61 RKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE---------------PR 105
R++LP++ EE+++ + V+ IVGETGSGKTTQIPQ+L + PR
Sbjct: 190 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPR 249
Query: 106 WVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVI-EPSLES 164
+AA++VA RV+ E ++G +GY IR E S KT+L + T+ +LLR ++ + +L +
Sbjct: 250 RLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLST 309
Query: 165 YSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIP 224
+ +IVDE ER +D L L+DL+ P LKL++SSA LD F YFGS P+ I
Sbjct: 310 VTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQ 369
Query: 225 GRRYPV-ELF 233
GR + V E+F
Sbjct: 370 GRPFEVKEMF 379
Score = 320 (117.7 bits), Expect = 1.9e-54, Sum P(2) = 1.9e-54
Identities = 93/322 (28%), Positives = 153/322 (47%)
Query: 260 GDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERAR 319
G +L+FL G DEI + + + + +++N+ T Q K+ + P R
Sbjct: 623 GAVLIFLPGYDEIVGLRDRILFDDKRFADSTHRYQVFMLHSNMQTSDQKKVLKNPPAGVR 682
Query: 320 KVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSER 379
K++L+TNIAETS+T++ + +VI G K KS++ + L + ISKASA QR G + R
Sbjct: 683 KIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 742
Query: 380 TGPGKCFRLYTLHNYHRIWMTILCQKYNELIWKMLSLFSNVL--VNF---DFI----DPP 430
PG CFRL++ + + + + + + L L + +L VN DF+ +PP
Sbjct: 743 CRPGICFRLFSRLRFQNM-LEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAPEPP 801
Query: 431 XXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIA 490
A++ LT +G +A+ P++P L K ++ KC D I+TIA
Sbjct: 802 PALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIA 861
Query: 491 AMLFVGNSIFYRPKDKQIYADN-ARMNFHLGDVGDRIALLRVYNCWRECNYSTEW----C 545
L + + Q A R F G D +ALLR + W++ S W C
Sbjct: 862 CTLAYRDPFVLPTQASQKRAAMLCRKRFTAGAFSDHMALLRAFQAWQKAR-SDGWERAFC 920
Query: 546 RENYIQVSSMKRARDIRDQLEG 567
+N++ ++M+ +R QL G
Sbjct: 921 EKNFLSQATMEIIIGMRTQLLG 942
Score = 43 (20.2 bits), Expect = 2.3e-25, Sum P(2) = 2.3e-25
Identities = 20/63 (31%), Positives = 28/63 (44%)
Query: 234 YTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAEL 293
Y K P + +AA + AL PT D L++ DE+ RA I R T + L
Sbjct: 1014 YKKIPPANG-QAAAIKAL------PT-DWLIY----DEMTRAHRIANIRCCSAVTPVTIL 1061
Query: 294 IIC 296
+ C
Sbjct: 1062 VFC 1064
>UNIPROTKB|Q8TE96 [details] [associations]
symbol:DQX1 "ATP-dependent RNA helicase DQX1" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261
EMBL:AC005041 HOVERGEN:HBG039428 CTD:165545 KO:K14433 OMA:CGQAVQA
OrthoDB:EOG4548Z3 EMBL:AK074337 EMBL:AK092420 EMBL:BC075018
IPI:IPI00385794 IPI:IPI00843897 IPI:IPI00844595 RefSeq:NP_598376.2
UniGene:Hs.191705 ProteinModelPortal:Q8TE96 SMR:Q8TE96
STRING:Q8TE96 PhosphoSite:Q8TE96 DMDM:145558898 PaxDb:Q8TE96
PRIDE:Q8TE96 Ensembl:ENST00000393951 Ensembl:ENST00000404568
GeneID:165545 KEGG:hsa:165545 UCSC:uc010yrw.2 GeneCards:GC02M074745
H-InvDB:HIX0200286 HGNC:HGNC:20410 HPA:HPA039158 neXtProt:NX_Q8TE96
PharmGKB:PA134916600 InParanoid:Q8TE96 GenomeRNAi:165545
NextBio:88548 ArrayExpress:Q8TE96 Bgee:Q8TE96 CleanEx:HS_DQX1
Genevestigator:Q8TE96 Uniprot:Q8TE96
Length = 717
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 165/540 (30%), Positives = 273/540 (50%)
Query: 67 YPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE----------------PRWVAAM 110
+ F E+L +G V+ + GE GSGK+TQIPQ+ E P +AA
Sbjct: 52 FTFLEQLESNPTG--VVLVSGEPGSGKSTQIPQWCAEFALARGFQKGQVTVTQPYPLAAR 109
Query: 111 SVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIV 170
S+A RV+ EM + LGHEVGYSI EDCT T+L++ D +LL+E+ ++ VL++
Sbjct: 110 SLALRVADEMDLTLGHEVGYSIPQEDCTGPNTLLRFCWDRLLLQEVASTRGTGAWGVLVL 169
Query: 171 DEAQERTLSTDNLFGLLKDL-INYRP-DLKLLISSATLDAEKFSDYFGSAPIFKIP---G 225
DEAQER++++D+L GLL+D + P DL++++ + K ++G+ PI IP G
Sbjct: 170 DEAQERSVASDSLQGLLQDARLEKLPGDLRVVVVTDPALEPKLRAFWGNPPIVHIPREPG 229
Query: 226 RRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRG 285
R P +++ P D +EAA L++ E GD+LVFL ++EI E L +
Sbjct: 230 ER-PSPIYWDTIPP-DRVEAACQAVLELCRKELPGDVLVFLPSEEEISLCCESLSREVES 287
Query: 286 LGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGF 345
L + + P++ + +QA ++E ARKVV+ +A+ S ++ I++VI G
Sbjct: 288 LLLQGLPPRVLPLHPDCGRAVQA-VYEDMD--ARKVVVTHWLADFSFSLPSIQHVIDSGL 344
Query: 346 AKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIWMTILCQK 405
YNP+ E ++ PISK A R + PG C LY ++ + L Q
Sbjct: 345 ELRSVYNPRIRAEFQVLRPISKCQAEARRLRARGFPPGSCLCLYP-KSFLELEAPPLPQP 403
Query: 406 Y--NELIWKMLSLFSNVLV----NFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGR 459
E + ++ L + F+D P AL+ G L+ +G
Sbjct: 404 RVCEENLSSLVLLLKRRQIAEPGECHFLDQPAPEALMQALEDLDYLAALDDDGDLSDLGV 463
Query: 460 QMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHL 519
++EFP+ P+L+K +++ ++ C DE++T+AAML F RP + A+ A + L
Sbjct: 464 ILSEFPLAPELAKALLASCEFDCVDEMLTLAAMLTAAPG-FTRPP---LSAEEAALRRAL 519
Query: 520 GDV-GDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVEIDTSI 578
GD +L++VY + + WC+ + +++ +A +R +L L R+E+ S+
Sbjct: 520 EHTDGDHSSLIQVYEAFIQSGADEAWCQARGLNWAALCQAHKLRGELLELMQRIELPLSL 579
>RGD|1591766 [details] [associations]
symbol:Dqx1 "DEAQ box RNA-dependent ATPase 1" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
RGD:1591766 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH473957
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
CTD:165545 KO:K14433 OMA:CGQAVQA OrthoDB:EOG4548Z3 IPI:IPI00194915
RefSeq:NP_001102877.1 UniGene:Rn.154059 Ensembl:ENSRNOT00000011002
GeneID:680434 KEGG:rno:680434 UCSC:RGD:1591766 NextBio:718702
Uniprot:D4A474
Length = 717
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 164/538 (30%), Positives = 267/538 (49%)
Query: 69 FWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE----------------PRWVAAMSV 112
F E L + +G V+ + GE GSGK+TQIPQ+ E P +AAMS+
Sbjct: 51 FLEHLESSPTG--VVLVSGEPGSGKSTQIPQWCAEFALARGFQTGQVTVTQPYPLAAMSL 108
Query: 113 AARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDE 172
A+RV+ EM + LGHE+GYSI EDCT T+L++ D + L+E+ ++SVL++DE
Sbjct: 109 ASRVADEMDLTLGHEIGYSIPQEDCTGPNTMLRFCWDRLFLQEVASTRGPGAWSVLVLDE 168
Query: 173 AQERTLSTDNLFGLLKD--LINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPV 230
AQER++++D L GLL+D L N D +++I + + KF ++G++P +P R P
Sbjct: 169 AQERSVASDLLQGLLRDTRLRNLPGDPRVVIVTDSALEPKFQAFWGNSPTVHVP--REPG 226
Query: 231 E---LFYTKAPEVDYIEAAIVTALQI-HVNEPTGDILVFLTGQDEIERAEEILKQRTRGL 286
E L Y D +EAA L++ E GD+LV+L ++EI E L + L
Sbjct: 227 ENPTLTYKDTVPADLVEAACQAVLELCQREEAPGDVLVYLPSEEEISLCCESLSREMGML 286
Query: 287 GTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFA 346
+ P++ +Q ++E T RK+V+ +A+ S ++ I++VI G
Sbjct: 287 AVPGPLPRVLPLHPGCGQAIQT-VYEDTDVSVRKIVVTHWLADFSFSLPFIQHVIDSGLE 345
Query: 347 KVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIWMTILCQKY 406
YNP+ ES ++ ISK A R + PG C RLY+ + K
Sbjct: 346 LRSVYNPRIRAESQVLRRISKCQAEARLLRARGFPPGTCLRLYSKSTLDLEAPPLPHPKV 405
Query: 407 -NELIWKMLSLFSNVLV----NFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQM 461
E + ++ L + F+D P AL+ G L+ +G +
Sbjct: 406 CEENLSSLVLLLKRKQIAEPGECHFLDRPAPEALMQALEDLDYLAALDDDGDLSDLGIIL 465
Query: 462 AEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGD 521
+EFP+ P+L+K +++ ++ C DE++T+AAML F RP + A A + L
Sbjct: 466 SEFPLPPELAKALLASCEFNCVDEMLTLAAMLTAAPG-FTRPP---LCAGEAALRRGLEH 521
Query: 522 V-GDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVEIDTSI 578
GD +L++VY + + WC+ + ++ +AR +R +L L R+E+ S+
Sbjct: 522 ADGDHSSLIQVYEAFVQSGADETWCQARGLSWEALCQARKLRAELLELMQRIELPLSL 579
>UNIPROTKB|F1NS70 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:AADN02056192 EMBL:AADN02056193
IPI:IPI00591470 Ensembl:ENSGALT00000000247 Uniprot:F1NS70
Length = 1339
Score = 325 (119.5 bits), Expect = 1.2e-53, Sum P(2) = 1.2e-53
Identities = 80/190 (42%), Positives = 117/190 (61%)
Query: 61 RKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYL----YE-----------PR 105
R++LP++ EE+++ + V+ IVGETGSGKTTQIPQ+L YE PR
Sbjct: 100 RQSLPVFEKKEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCYENGVPCRIFCTQPR 159
Query: 106 WVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVI-EPSLES 164
+A ++VA RV+ E K+G VGY IR E S +T+L + T+ +LLR ++ + +L +
Sbjct: 160 RLAVIAVAERVAAERREKVGQTVGYQIRLESRVSPRTLLTFCTNGILLRTLMAGDSALST 219
Query: 165 YSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIP 224
+ +IVDE ER +D L L+D++ + +LKL+ISSA LDA F YFGS P+ I
Sbjct: 220 VTHVIVDEVHERDRFSDFLLIKLRDILQNQTNLKLIISSAALDANLFIKYFGSCPVIHIQ 279
Query: 225 GRRYPV-ELF 233
GR + V E+F
Sbjct: 280 GRPFEVKEMF 289
Score = 314 (115.6 bits), Expect = 1.2e-53, Sum P(2) = 1.2e-53
Identities = 95/324 (29%), Positives = 155/324 (47%)
Query: 260 GDILVFLTGQDEI-ERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERA 318
G IL+FL G DEI + I+ R + ++ + +++N+ T Q + + P
Sbjct: 533 GAILIFLPGYDEIISLRDRIIFDDKRFVDNAHSKYQVFMLHSNMQTLDQKNVLKTPPSGI 592
Query: 319 RKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSE 378
RK++L+TNIAETS+T++ + +VI G K KS++ + + L ISKASA QR G +
Sbjct: 593 RKIILSTNIAETSITVNDVVFVIDSGKMKEKSFDALSCVTMLKTVWISKASAIQRRGRAG 652
Query: 379 RTGPGKCFRLYTLHNYHRIWMTILCQKYNELIWKMLSLFSNVL--VN---FDFI----DP 429
R PG CF L++ + + + + + + L L + +L VN DF+ DP
Sbjct: 653 RCRPGVCFHLFSRLRFQNM-LEFQTPELRRMPLQELCLHTKLLAPVNCPVVDFLMKAPDP 711
Query: 430 PXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITI 489
P A++ LT +G +AE P++P L K ++ KC D I+TI
Sbjct: 712 PPALIVRNAIQMLKKIDAMDVWEDLTELGYHLAELPVEPHLGKMVLCAVVLKCLDPILTI 771
Query: 490 AAMLFVGNSIFYRPK--DKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEW--- 544
A L + F P ++ A R G D + LLR + W++ S W
Sbjct: 772 ACTLAYRDP-FVLPTVASQKRAAMLCRKRLAAGTFSDHMVLLRAFQAWQKAR-SDGWERV 829
Query: 545 -CRENYIQVSSMKRARDIRDQLEG 567
C +N++ ++M+ +R QL G
Sbjct: 830 FCEKNFLSQATMEIIIGMRTQLLG 853
>WB|WBGene00015525 [details] [associations]
symbol:rha-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0071688 "striated muscle myosin thick filament
assembly" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0016246 GO:GO:0071688 GO:GO:0000003 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:AKLQPRT EMBL:FO080280 PIR:H88533 RefSeq:NP_498895.1
UniGene:Cel.10874 ProteinModelPortal:P34305 SMR:P34305
IntAct:P34305 STRING:P34305 PaxDb:P34305 EnsemblMetazoa:C06E1.10
GeneID:176207 KEGG:cel:CELE_C06E1.10 UCSC:C06E1.10 CTD:176207
WormBase:C06E1.10 InParanoid:P34305 NextBio:891582 Uniprot:P34305
Length = 1148
Score = 369 (135.0 bits), Expect = 1.2e-53, Sum P(2) = 1.2e-53
Identities = 94/258 (36%), Positives = 147/258 (56%)
Query: 47 KSVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE--- 103
K V+ + +Q+ R LPI+ +++A++ V + GETGSGKTTQIPQ+LYE
Sbjct: 219 KKVIVERSKEIQKSRAELPIFAEEMRIVEAINENLVTVVCGETGSGKTTQIPQFLYEAGY 278
Query: 104 -----------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCML 152
PR VAA+++A RV E+ EV Y IR+E S+ T + +MTD +L
Sbjct: 279 ASEGELIGITEPRRVAAIAMAQRVGVELAKP--DEVSYQIRYEGTRSETTNILFMTDGVL 336
Query: 153 LREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPD----LKLLISSATLDA 208
++E+ + L+ YSV+++DEA ER++ +D L G+L ++ R L+L+I SATL
Sbjct: 337 MKEMEQDVMLKKYSVILIDEAHERSMYSDVLIGMLSRIVPLRSKTARPLRLVIMSATLRL 396
Query: 209 EKFSD--YFG--SAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILV 264
+ F+ F + + K+ R++PV + + K DYI +A +IH P G ILV
Sbjct: 397 DDFTHKKLFPLLTPKVIKVDARQFPVSVHFEKRTPDDYIASAFRKTCRIHETLPPGAILV 456
Query: 265 FLTGQDEIERAEEILKQR 282
F+TGQ E+++ LK+R
Sbjct: 457 FVTGQHEVKQLITKLKKR 474
Score = 262 (97.3 bits), Expect = 1.2e-53, Sum P(2) = 1.2e-53
Identities = 69/216 (31%), Positives = 110/216 (50%)
Query: 292 ELIIC-PIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKS 350
E + C P+Y+ L Q ++F+ TP R V++TN+AETSLTI G+KYVI GF K +
Sbjct: 573 EPLYCLPLYSLLSMGKQRRVFDETPAGMRLCVISTNVAETSLTIPGVKYVIDGGFEKRRL 632
Query: 351 YNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIWM----TILCQKY 406
Y+ TG+ V IS+AS +QR G + R G +RLY+ Y IL +
Sbjct: 633 YDSITGVSRFAVCRISQASGDQRAGRAGRISAGHAYRLYSSAVYQDFVKFADPEILSKPA 692
Query: 407 NELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKA-------GQLTRVGR 459
++L+ + S+ +VNF F P GAL+++ ++T++G+
Sbjct: 693 DQLVLHLKSMNIVKVVNFPFPSAPDEQMLESAEKRLCRLGALSESTKNGKTEARITKLGK 752
Query: 460 QMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFV 495
+A FP+ P +K I D++ I + ++L V
Sbjct: 753 TLAVFPLAPSYAKFIAMADQHNLMSHAILLISLLSV 788
Score = 92 (37.4 bits), Expect = 8.4e-36, Sum P(2) = 8.4e-36
Identities = 29/130 (22%), Positives = 59/130 (45%)
Query: 453 QLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIF----YR---PKD 505
++T++G+ +A FP+ P +K I D++ I + ++L V + R P++
Sbjct: 746 RITKLGKTLAVFPLAPSYAKFIAMADQHNLMSHAILLISLLSVREPLIPVSSLRGDTPEE 805
Query: 506 -----KQIYADNARMNFHLGD--VGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRA 558
K + + R H G +GD L+ + + Y+ C + ++V ++ A
Sbjct: 806 TKELMKNVLKERRRWCSHTGARRLGDLKVLMHAASVAEQIKYNARECEKVGLRVKALVEA 865
Query: 559 RDIRDQLEGL 568
R +R QL +
Sbjct: 866 RKLRQQLTNI 875
Score = 50 (22.7 bits), Expect = 4.8e-19, Sum P(2) = 4.8e-19
Identities = 20/71 (28%), Positives = 32/71 (45%)
Query: 9 KQQREKCTFEIEDKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTLPIYP 68
KQ + K K + E +F G EF+ + P+K S+ L +E + P++P
Sbjct: 59 KQAKRKLAAVQSRKALKQTQEELFAG--LAEFQLD-PSKLCQLSSSTKLSKEPEKAPVFP 115
Query: 69 FWEELLQAVSG 79
E L+ SG
Sbjct: 116 ---EKLKVFSG 123
Score = 38 (18.4 bits), Expect = 3.9e-30, Sum P(2) = 3.9e-30
Identities = 19/109 (17%), Positives = 43/109 (39%)
Query: 271 EIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAET 330
E ++ +E + + + K ++ P+ LP E ++ + R + L +
Sbjct: 995 EQDKNQEPIYDPVKDMVVKTVKVTFGPLNWELPNENRSVPHDIMMYRYFALFLLDGLVFE 1054
Query: 331 SLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSER 379
L + ++ P VKS+ +L+N + + R+ L E+
Sbjct: 1055 KLK-EYTPKLLAPPSTMVKSWAKLQKRTEMLLNKLIEKEVTTRSSLKEQ 1102
>UNIPROTKB|Q05B79 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:DAAA02002574
EMBL:DAAA02002573 EMBL:BC122652 IPI:IPI00686397
RefSeq:NP_001073720.1 UniGene:Bt.103344 Ensembl:ENSBTAT00000008082
GeneID:509583 KEGG:bta:509583 InParanoid:Q05B79 NextBio:20869030
Uniprot:Q05B79
Length = 1010
Score = 353 (129.3 bits), Expect = 2.2e-53, Sum P(2) = 2.2e-53
Identities = 97/337 (28%), Positives = 162/337 (48%)
Query: 243 IEAAIVTAL--QIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYA 300
++ ++ AL I + E G ILVFL G D I ++L + K + II P+++
Sbjct: 472 VDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVM---FKSDKFIIIPLHS 528
Query: 301 NLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESL 360
+PT Q ++F+ TP RK+V+ATNIAETS+TID + YVI G K ++ + + ++
Sbjct: 529 LMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTM 588
Query: 361 LVNPISKASANQRTGLSERTGPGKCFRLYT------LHNYHRIWMTILCQKYNELIWKML 414
+SKA+A QR G + R PG C+ LY L +Y IL EL ++
Sbjct: 589 SAEWVSKANAKQRKGRAGRVQPGHCYHLYNSLRASLLDDYQL--PEILRTPLEELCLQIK 646
Query: 415 SLFSNVLVNF--DFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSK 472
L + +F +DPP AL+K +LT +G +A P++P + K
Sbjct: 647 ILRLGGIAHFLSRLMDPPSNEAVLLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGK 706
Query: 473 TIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVY 532
I+ + C D ++TIAA L + F P K+ AD R D + ++ +
Sbjct: 707 MILFGALFCCLDPVLTIAASLSFKDP-FVIPLGKEKVADARRKELAKDTKSDHLTVVNAF 765
Query: 533 NCWRECN-----YSTEWCRENYIQVSSMKRARDIRDQ 564
W + Y ++C E ++ ++++ +++ Q
Sbjct: 766 KGWEKAKQRGFRYEKDYCWEYFLSSNTLQMLHNMKGQ 802
Score = 276 (102.2 bits), Expect = 2.2e-53, Sum P(2) = 2.2e-53
Identities = 80/250 (32%), Positives = 128/250 (51%)
Query: 40 FESELPNKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQ 99
F +LP+ + K + M+ + T+ V+ + +L E G G +I
Sbjct: 205 FREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQF-ILDNYIERGKGSACRI-- 261
Query: 100 YLYEPRWVAAMSVAARVSQEMGVKLGH--EVGYSIRFEDCTSDKT-VLKYMTDCMLLREI 156
+PR ++A+SVA RV+ E G+ GY IR + K + Y T ++L+ +
Sbjct: 262 VCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWL 321
Query: 157 VIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFG 216
+P L S S +++DE ER L +D L ++KDL++YRPDLK+++ SATL+AEKFS+YFG
Sbjct: 322 QSDPHLSSVSHIVLDEIHERNLQSDVLMTVVKDLLSYRPDLKVVLMSATLNAEKFSEYFG 381
Query: 217 SAPIFKIPGRRYPVELFYTKAPEVDYIEAA-IVTALQIHVNEPTGDILVFLTGQDEIERA 275
+ P+ IPG +PV + + D IE V + H ++ + + E E
Sbjct: 382 NCPMIHIPGFTFPVVEYLLE----DIIEKIRYVPEQKEHRSQFKKGFMQGHVNRQEKEEK 437
Query: 276 EEILKQRTRG 285
E I K+R G
Sbjct: 438 EAIYKERWPG 447
Score = 124 (48.7 bits), Expect = 2.1e-37, Sum P(2) = 2.1e-37
Identities = 33/97 (34%), Positives = 49/97 (50%)
Query: 12 REKCTFEIEDKIVDFFSESVFDGDNFD-----EFESELPNKSVVKSTLEMLQEERKTLPI 66
+EK F I DK +D SE + + D + +L K +EM Q R+ LP
Sbjct: 153 QEKRPFRIRDKYIDRDSEYLLQENEPDATLDQQLLEDLQKKKTDLRYIEM-QRFREKLPS 211
Query: 67 YPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE 103
Y +EL+ + + V I GETG GKTTQ+ Q++ +
Sbjct: 212 YGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILD 248
>UNIPROTKB|F6V8H1 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RIRNRSY Ensembl:ENSCAFT00000013769
EMBL:AAEX03013695 Uniprot:F6V8H1
Length = 1122
Score = 361 (132.1 bits), Expect = 3.1e-53, Sum P(2) = 3.1e-53
Identities = 98/339 (28%), Positives = 161/339 (47%)
Query: 241 DYIEAAIVTALQIHV--NEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPI 298
D ++ ++ AL H+ E G ILVFL G D I ++L + K +I P+
Sbjct: 582 DKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVM---FKSDRFLIIPL 638
Query: 299 YANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGME 358
++ +PT Q ++F+ TP RK+V+ATNIAETS+TID + YVI G K ++ + +
Sbjct: 639 HSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIS 698
Query: 359 SLLVNPISKASANQRTGLSERTGPGKCFRLYT------LHNYHRIWMTILCQKYNELIWK 412
++ +SKA+A QR G + R PG C+ LY L +Y IL EL +
Sbjct: 699 TMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQL--PEILRTPLEELCLQ 756
Query: 413 MLSLFSNVLVNF--DFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKL 470
+ L + F +DPP AL+K +LT +G +A P++P +
Sbjct: 757 IKILRLGGIAYFLSRLMDPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHI 816
Query: 471 SKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLR 530
K I+ + C D ++TIAA L + F P K+ AD R D + ++
Sbjct: 817 GKMILFGALFCCLDPVLTIAASLSFKDP-FVIPLGKEKIADARRKELAKDTKSDHLTVVN 875
Query: 531 VYNCWRECN-----YSTEWCRENYIQVSSMKRARDIRDQ 564
+ W E Y ++C E ++ ++++ +++ Q
Sbjct: 876 AFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQ 914
Score = 267 (99.0 bits), Expect = 3.1e-53, Sum P(2) = 3.1e-53
Identities = 67/194 (34%), Positives = 107/194 (55%)
Query: 40 FESELPNKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQ 99
F +LP+ + K + M+ + T+ V+ + +L E G G +I
Sbjct: 317 FREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQF-ILDDYIERGKGSACRI-- 373
Query: 100 YLYEPRWVAAMSVAARVSQEMGVKLGH--EVGYSIRFEDCTSDKT-VLKYMTDCMLLREI 156
+PR ++A+SVA RV+ E G+ GY IR + K + Y T ++L+ +
Sbjct: 374 VCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWL 433
Query: 157 VIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFG 216
+ L S S +++DE ER L +D L ++KDL+N+RPDLK+++ SATL+AEKFS+YFG
Sbjct: 434 QSDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVILMSATLNAEKFSEYFG 493
Query: 217 SAPIFKIPGRRYPV 230
+ P+ IPG +PV
Sbjct: 494 NCPMIHIPGFTFPV 507
Score = 127 (49.8 bits), Expect = 1.6e-38, Sum P(2) = 1.6e-38
Identities = 33/96 (34%), Positives = 52/96 (54%)
Query: 12 REKCTFEIEDKIVDFFSESVFDGDNFD-EFESEL-PNKSVVKSTLEMLQEE--RKTLPIY 67
+EK TF I DK +D SE + + D + +L + KS L ++ + R+ LP Y
Sbjct: 265 QEKRTFRIRDKYIDRDSEYLLQENEPDVALDQQLLEDLRKKKSDLRYIEMQHFREKLPSY 324
Query: 68 PFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE 103
+EL+ + + V I GETG GKTTQ+ Q++ +
Sbjct: 325 GMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILD 360
>UNIPROTKB|Q7Z478 [details] [associations]
symbol:DHX29 "ATP-dependent RNA helicase DHX29"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AY036974 EMBL:BC056219 EMBL:AL834496
EMBL:BX648101 EMBL:BX648269 EMBL:AL079292 EMBL:AF070639
IPI:IPI00217413 RefSeq:NP_061903.2 UniGene:Hs.740463
ProteinModelPortal:Q7Z478 SMR:Q7Z478 IntAct:Q7Z478
MINT:MINT-1376685 STRING:Q7Z478 PhosphoSite:Q7Z478 DMDM:110278938
PaxDb:Q7Z478 PeptideAtlas:Q7Z478 PRIDE:Q7Z478
Ensembl:ENST00000251636 GeneID:54505 KEGG:hsa:54505 UCSC:uc003jpx.3
CTD:54505 GeneCards:GC05M054552 H-InvDB:HIX0004866 HGNC:HGNC:15815
HPA:HPA038317 HPA:HPA038318 MIM:612720 neXtProt:NX_Q7Z478
PharmGKB:PA27215 HOGENOM:HOG000247063 HOVERGEN:HBG081436
InParanoid:Q7Z478 OMA:WLLYQEK OrthoDB:EOG43FGW2 PhylomeDB:Q7Z478
ChiTaRS:DHX29 GenomeRNAi:54505 NextBio:56869 Bgee:Q7Z478
CleanEx:HS_DHX29 Genevestigator:Q7Z478 GermOnline:ENSG00000067248
Uniprot:Q7Z478
Length = 1369
Score = 310 (114.2 bits), Expect = 5.2e-53, Sum P(3) = 5.2e-53
Identities = 95/322 (29%), Positives = 153/322 (47%)
Query: 260 GDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERAR 319
G +L+FL G I++ ++L R + + +++ L T+ QA F P R
Sbjct: 868 GAVLIFLPGLAHIQQLYDLLSNDRRFYSERYK---VIALHSILSTQDQAAAFTLPPPGVR 924
Query: 320 KVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSER 379
K+VLATNIAET +TI + +VI G K Y+ + M SL+ +SKASA QR G + R
Sbjct: 925 KIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 984
Query: 380 TGPGKCFRLYTLHNYHRIW----MTILCQKYNELIWKMLSLFSNVLVNFDFI----DPPX 431
G CFR+YT + IL EL ++ N+ DF+ DPP
Sbjct: 985 VRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKC--NLGSPEDFLSKALDPPQ 1042
Query: 432 XXXXXXXXXXXXXXGA--LNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITI 489
GA LN+ +LT +G+ +A P++ K+ K ++ + C D + T+
Sbjct: 1043 LQVISNAMNLLRKIGACELNEP-KLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATL 1101
Query: 490 AAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWR----ECNYSTE-- 543
AA++ S F P ++ AD A+ + D D + + Y W+ E Y +E
Sbjct: 1102 AAVM-TEKSPFTTPIGRKDEADLAKSALAMAD-SDHLTIYNAYLGWKKARQEGGYRSEIT 1159
Query: 544 WCRENYIQVSSMKRARDIRDQL 565
+CR N++ +S+ D++ +L
Sbjct: 1160 YCRRNFLNRTSLLTLEDVKQEL 1181
Score = 259 (96.2 bits), Expect = 5.2e-53, Sum P(3) = 5.2e-53
Identities = 58/137 (42%), Positives = 86/137 (62%)
Query: 103 EPRWVAAMSVAARVSQEMGVKLGHE-----VGYSIRFEDCTSDKTVLKYMTDCMLLREIV 157
+PR ++A+S+A RV E+G + G GY IR E + T L Y T +LLR++
Sbjct: 629 QPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMESRACESTRLLYCTTGVLLRKLQ 688
Query: 158 IEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGS 217
+ L + S +IVDE ER++ +D L +LK+++ R DL L++ SAT+D+EKFS YF
Sbjct: 689 EDGLLSNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTH 748
Query: 218 APIFKIPGRRYPVELFY 234
PI +I GR YPVE+F+
Sbjct: 749 CPILRISGRSYPVEVFH 765
Score = 111 (44.1 bits), Expect = 5.2e-53, Sum P(3) = 5.2e-53
Identities = 24/79 (30%), Positives = 45/79 (56%)
Query: 27 FSESVFDGDNFDEFESELPNKSVVKST--LEMLQEERKTLPIYPFWEELLQAVSGYPVLA 84
FS + N ++ E ++ST + L +ER+ LP++ + +++ + + V+
Sbjct: 533 FSALSLESANVEDLEPVRNLFRKLQSTPKYQKLLKERQQLPVFKHRDSIVETLKRHRVVV 592
Query: 85 IVGETGSGKTTQIPQYLYE 103
+ GETGSGK+TQ+P +L E
Sbjct: 593 VAGETGSGKSTQVPHFLLE 611
>TAIR|locus:2009200 [details] [associations]
symbol:NIH "nuclear DEIH-boxhelicase" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=ISS]
InterPro:IPR002110 InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0008026 IPI:IPI00521146 RefSeq:NP_172152.1 UniGene:At.20810
PRIDE:F4IDQ6 EnsemblPlants:AT1G06670.1 GeneID:837177
KEGG:ath:AT1G06670 OMA:GNMEENT Uniprot:F4IDQ6
Length = 1576
Score = 369 (135.0 bits), Expect = 8.4e-53, Sum P(2) = 8.4e-53
Identities = 113/363 (31%), Positives = 175/363 (48%)
Query: 236 KAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEE-ILKQRTRGLGTKIAELI 294
K EVD + + +I + G ILVFL G +EI + +E +L R K +I
Sbjct: 553 KPEEVD-VGLIVKLMKKICSDSKDGAILVFLPGWEEISKTKEKLLDDRFFAHSAKF--II 609
Query: 295 ICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPK 354
+C +++ +P E Q K+F P RK+VLATNIAE+++TID + YVI G K KSY+P
Sbjct: 610 LC-LHSRVPAEEQKKVFNRPPRGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPY 668
Query: 355 TGMESLLVNPISKASANQRTGLSERTGPGKCFRLYT------LHNYHRIWMTILCQKYNE 408
+ +L + +SKA+A QR G + R G C+ LY+ L Y R+ ++ +E
Sbjct: 669 NDVSTLQSSWVSKANAKQRAGRAGRCQAGICYHLYSKLRAASLPEY-RV-PEVMRMPVDE 726
Query: 409 LIWKMLSLFSNVLVNFDFI----DPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEF 464
L ++ L N VN DF+ DPP GAL +LT +G++ +
Sbjct: 727 LCLQVKMLDPNCNVN-DFLQKLMDPPVAQSIENALIILKDIGALTPEEELTELGQKFGQL 785
Query: 465 PIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGN--SIFYRPKD-KQIYADNARMNFHLGD 521
P+ P++SK I C D + +A + ++ P D K+ A + GD
Sbjct: 786 PVHPRISKMIYFAILVNCLDPALILACAADEKDPFTMPLSPGDRKKAAAAKHELASLYGD 845
Query: 522 VGDRIALLRVYNCWRECNYS---TEWCRENYIQVSSMKRARDIRDQLEGLFARVEIDTSI 578
D +A + + CW+ S E+C + +I MKR D+ +L+G R + S
Sbjct: 846 HSDHLATVAAFQCWKNAKASGQAKEFCSKYFISQVVMKRLDDLCRKLQGELNRHGVIPSS 905
Query: 579 YSN 581
SN
Sbjct: 906 SSN 908
Score = 258 (95.9 bits), Expect = 8.4e-53, Sum P(2) = 8.4e-53
Identities = 51/135 (37%), Positives = 86/135 (63%)
Query: 103 EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIV---IE 159
+PR ++A+SV+ R+S E G +G VGY +R + ++ + + T+ +LLR ++ +
Sbjct: 272 QPRRISAISVSDRISWERGETIGRTVGYKVRLQSEGGRESSVVFCTNGILLRVLIGKGVN 331
Query: 160 PSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAP 219
S+ + +IVDE ER +D + +L+DL+ P L+L++ SATLDAE+FS+YFG P
Sbjct: 332 SSVPDITHIIVDEIHERDSYSDFMLMILRDLLPSNPHLRLILMSATLDAERFSEYFGGCP 391
Query: 220 IFKIPGRRYPVELFY 234
+ ++PG YPV F+
Sbjct: 392 VVRVPGFTYPVRTFF 406
Score = 167 (63.8 bits), Expect = 3.1e-43, Sum P(2) = 3.1e-43
Identities = 45/149 (30%), Positives = 74/149 (49%)
Query: 25 DFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLA 84
DFF + + + L ++ + + E R LPI F + ++ AV V+
Sbjct: 178 DFFKKPHMTKHDIENNVVSLSSRLKKERHFREIFEARSKLPIASFRDAIISAVESNQVVL 237
Query: 85 IVGETGSGKTTQIPQYLYE----------------PRWVAAMSVAARVSQEMGVKLGHEV 128
I GETG GKTTQ+PQYL + PR ++A+SV+ R+S E G +G V
Sbjct: 238 IAGETGCGKTTQVPQYLLDHMWHSKKEACKIICTQPRRISAISVSDRISWERGETIGRTV 297
Query: 129 GYSIRFEDCTSDKTVLKYMTDCMLLREIV 157
GY +R + ++ + + T+ +LLR ++
Sbjct: 298 GYKVRLQSEGGRESSVVFCTNGILLRVLI 326
>UNIPROTKB|B4DVG8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261 EMBL:AC009087
UniGene:Hs.151218 HGNC:HGNC:17211 ChiTaRS:DHX38 EMBL:AK301074
IPI:IPI00909589 SMR:B4DVG8 STRING:B4DVG8 Ensembl:ENST00000536867
UCSC:uc010vmp.2 HOVERGEN:HBG093770 Uniprot:B4DVG8
Length = 539
Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 118/271 (43%), Positives = 166/271 (61%)
Query: 307 QAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPIS 366
QAKIF+ P+ RK ++ATNIAETSLT+DGI +VI G+ K+K +NP+ GM++L + PIS
Sbjct: 99 QAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPIS 158
Query: 367 KASANQRTGLSERTGPGKCFRLYTLHNYHRIWMTILC---QKYN--ELIWKMLSLFSNVL 421
+A+ANQR+G + RTGPG+CFRLYT Y +T Q+ N ++ + SL L
Sbjct: 159 QANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDL 218
Query: 422 VNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKT-IVSLDKY 480
+ F F+DPP GAL+ G LT GR M EFP+DP LSK IVS D
Sbjct: 219 LQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDM- 277
Query: 481 KCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNY 540
CS EI+ I +ML V +IFYRPK ++ +D R F + + D + L VY W+ NY
Sbjct: 278 GCSSEILLIVSMLSVP-AIFYRPKGREEESDQIREKFAVPE-SDHLTYLNVYLQWKNNNY 335
Query: 541 STEWCRENYIQVSSMKRARDIRDQLEGLFAR 571
ST WC +++I +M++ R++R QL+ + +
Sbjct: 336 STIWCNDHFIHAKAMRKVREVRAQLKDIMVQ 366
>UNIPROTKB|F1NH89 [details] [associations]
symbol:LOC768812 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 PROSITE:PS51194
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 OMA:LACEQDI EMBL:AADN02057061
EMBL:AADN02057062 IPI:IPI00683398 Ensembl:ENSGALT00000023318
Uniprot:F1NH89
Length = 764
Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
Identities = 150/557 (26%), Positives = 263/557 (47%)
Query: 57 LQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYEPRWVA-------- 108
L +ER+ LP++ ++++ + ++ + G+ +GK++Q+PQ+ E A
Sbjct: 65 LMKERQELPVWKVRCAFMESLLHHQIVIVSGDAKTGKSSQVPQWCAEHCLAAGCRHGAAV 124
Query: 109 --------AMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEP 160
A+ +A R + EM V +GHEVGY + FE C + +T+L+Y TD ML RE++ P
Sbjct: 125 CSQAHGQVAVRLALRAADEMDVNIGHEVGYFVPFESCCTAETILRYCTDDMLQREMMSAP 184
Query: 161 SLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPI 220
L SY V+I+D+ ERT+ TD L G+LK ++ RP L+L+I +A + K D+ GS P+
Sbjct: 185 LLNSYGVIILDDVHERTVPTDVLLGVLKHVLRARPALRLVILTAPHMSSKLQDFCGSVPL 244
Query: 221 FKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILK 280
++ + E+ YT + D+ +A+ ++H + GDI++FL + +I++A ++++
Sbjct: 245 IRVENE-HQAEVVYTCSMPKDHFLSALRLLFELHHTKEKGDIVIFLACEQDIDKAYQMIR 303
Query: 281 QRTRGLGTKIAELIICPIYANL------PTELQAKIFEPTPERARKVVLATNIAETSLTI 334
Q + ELI P+Y P + + K ++ + RKV+L T+ + + I
Sbjct: 304 QEQSNSNPDLGELIPVPLYPTRNDLIPKPNQDKQKCYQ---KYRRKVLLTTSSGGSLIRI 360
Query: 335 DGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNY 394
I +VI G + K YNP+ +S+ PISKA A + + GK F LY
Sbjct: 361 KNITFVIDVGVERRKVYNPRIRADSVTTQPISKAQAEMHKQILSTSPSGKLFCLYPEEFT 420
Query: 395 HRIWMTILCQKYNE--LIWKMLSLFSNVLVNF---DFIDPPXXX-XXXXXXXXXXXXGAL 448
++ K E L +L L + F +F+ P
Sbjct: 421 YKEMKPDFPAKIQESNLTSMVLFLKRMDIAGFRHCEFLSRPVCPPSAKHGIRSTGKTHQT 480
Query: 449 NKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQI 508
+ G ++ F I K +++ + C E++ I +L N + P +
Sbjct: 481 RRQGSISAHSYLSQNFGILNKKGESLSVPCSFTCHTEVLPIHVLLHAPNCFLHTPSGTEE 540
Query: 509 YADNARMNFHLGDVGDRIALLRVYNCWRE--------CNYSTEWCRENYIQVSSMKRARD 560
A F GD L+ V+N +RE C + +WCR ++ S+++ A
Sbjct: 541 IALTCWRKFS-HPAGDHFTLINVFNAFREASTNSAGQCCSNEKWCRNYFLSCSALRMAEM 599
Query: 561 IRDQLEGLFARVEIDTS 577
IR +L + R+E+ S
Sbjct: 600 IRAELVEIMKRIELPIS 616
>UNIPROTKB|B0V0F7 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 PROSITE:PS00690
GO:GO:0005524 GO:GO:0003676 eggNOG:COG1643 GO:GO:0008026
HGNC:HGNC:2739 EMBL:CR759873 IPI:IPI00894447 SMR:B0V0F7
Ensembl:ENST00000456005 UCSC:uc011elj.1 Uniprot:B0V0F7
Length = 188
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 98/154 (63%), Positives = 130/154 (84%)
Query: 167 VLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGR 226
V++VDEA ERTL TD LFGL+KD+ +RP+LK+L++SAT+D +FS +F AP+F+IPGR
Sbjct: 35 VVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGR 94
Query: 227 RYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGL 286
R+PV++FYTKAPE DY+EA +V+ LQIHV +P GDILVFLTGQ+EIE A E+L+ R R L
Sbjct: 95 RFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRL 154
Query: 287 GTKIAELIICPIYANLPTELQAKIFEPTPERARK 320
G+KI EL++ PIYANLP+++QA+IF+PTP ARK
Sbjct: 155 GSKIRELLVLPIYANLPSDMQARIFQPTPPGARK 188
>TAIR|locus:2007003 [details] [associations]
symbol:FAS4 "FASCIATED STEM 4" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GO:GO:0005524 GO:GO:0003676 EMBL:AC051630
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000201240 KO:K14780
IPI:IPI00531863 PIR:E86457 RefSeq:NP_174605.1 UniGene:At.39951
ProteinModelPortal:Q9C813 SMR:Q9C813 STRING:Q9C813 PRIDE:Q9C813
EnsemblPlants:AT1G33390.1 GeneID:840232 KEGG:ath:AT1G33390
TAIR:At1g33390 InParanoid:Q9C813 OMA:EVQWISK PhylomeDB:Q9C813
ProtClustDB:CLSN2693169 Genevestigator:Q9C813 Uniprot:Q9C813
Length = 1237
Score = 320 (117.7 bits), Expect = 8.1e-52, Sum P(4) = 8.1e-52
Identities = 75/191 (39%), Positives = 111/191 (58%)
Query: 292 ELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSY 351
+L + P+YA L Q ++FE + R VV+ATN+AETSLTI GIKYV+ G KVK+Y
Sbjct: 646 KLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIPGIKYVVDTGRVKVKNY 705
Query: 352 NPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIWMT-----ILCQKY 406
+ KTGMES V+ IS+ASA+QR G + RTGPG C+RLY+ + I+ I+
Sbjct: 706 DSKTGMESYEVDWISQASASQRAGRAGRTGPGHCYRLYSSAVFSNIFEESSLPEIMKVPV 765
Query: 407 NELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPI 466
+ +I M S+ + NF F PP AL+ G LT +G+ M+ +P+
Sbjct: 766 DGVILLMKSMNIPKVENFPFPTPPEPSAIREAERCLKALEALDSNGGLTPLGKAMSHYPM 825
Query: 467 DPKLSKTIVSL 477
P+ S+ ++++
Sbjct: 826 SPRHSRMLLTV 836
Score = 212 (79.7 bits), Expect = 8.1e-52, Sum P(4) = 8.1e-52
Identities = 48/112 (42%), Positives = 73/112 (65%)
Query: 103 EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
+PR VA ++ A RV+ E+GV+LG EVG+ +R++ + + +K+MTD +LLREI + L
Sbjct: 299 QPRRVAVLATAKRVAFELGVRLGKEVGFQVRYDKKIGENSSIKFMTDGILLREIQNDFLL 358
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDL-----KLLISSATLDAE 209
YSV+I+DEA ER+L+TD L G+L +I R + K L S T+ +E
Sbjct: 359 RRYSVIILDEAHERSLNTDILIGMLTRVIKIRQEYYEEQQKSLQSGGTVTSE 410
Score = 156 (60.0 bits), Expect = 5.2e-46, Sum P(4) = 5.2e-46
Identities = 44/126 (34%), Positives = 69/126 (54%)
Query: 172 EAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSD---YFGSAP-IFKIPGRR 227
E Q+++L + G + P LKL++ SATL E F F + P + ++P R+
Sbjct: 395 EEQQKSLQSG---GTVTSECQITP-LKLILMSATLRVEDFVSGKRLFPNIPPLIEVPTRQ 450
Query: 228 YPVELFYTKAPE-VDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGL 286
YPV + ++K E VDYI A + IH P G ILVF+TGQ E++ E L++ ++ L
Sbjct: 451 YPVTIHFSKKTEIVDYIGEAYKKVMSIHKKLPQGGILVFVTGQREVDYLCEKLRKSSKEL 510
Query: 287 GTKIAE 292
+ A+
Sbjct: 511 VVQAAK 516
Score = 133 (51.9 bits), Expect = 8.1e-52, Sum P(4) = 8.1e-52
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 57 LQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE 103
++E RK LPI +E+++A++ +P + I G+TG GKTTQ+PQ+LYE
Sbjct: 234 VEETRKDLPIVMMEQEIMEAINRHPAVIISGQTGCGKTTQVPQFLYE 280
Score = 41 (19.5 bits), Expect = 8.1e-52, Sum P(4) = 8.1e-52
Identities = 13/64 (20%), Positives = 25/64 (39%)
Query: 502 RPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDI 561
R KD++ AR F D + + + + +C N + + +M +
Sbjct: 895 RKKDRKEKIKAARDRFS-NPSSDALTVAYALHSFEVSENGMGFCEANGLHLKTMDEMSKL 953
Query: 562 RDQL 565
+DQL
Sbjct: 954 KDQL 957
>UNIPROTKB|F5GZS0 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC134026
HGNC:HGNC:14410 IPI:IPI00922725 ProteinModelPortal:F5GZS0
SMR:F5GZS0 PRIDE:F5GZS0 Ensembl:ENST00000544526 ArrayExpress:F5GZS0
Bgee:F5GZS0 Uniprot:F5GZS0
Length = 994
Score = 285 (105.4 bits), Expect = 1.2e-51, Sum P(3) = 1.2e-51
Identities = 77/270 (28%), Positives = 128/270 (47%)
Query: 308 AKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISK 367
+++F+ TP RK+V+ATNIAETS+TID + YVI G K ++ + + ++ +SK
Sbjct: 520 SQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSK 579
Query: 368 ASANQRTGLSERTGPGKCFRLYT------LHNYHRIWMTILCQKYNELIWKMLSLFSNVL 421
A+A QR G + R PG C+ LY L +Y IL EL ++ L +
Sbjct: 580 ANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQL--PEILRTPLEELCLQIKILRLGGI 637
Query: 422 VNF--DFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDK 479
F +DPP AL+K +LT +G +A P++P + K I+
Sbjct: 638 AYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGAL 697
Query: 480 YKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECN 539
+ C D ++TIAA L + F P K+ AD R D + ++ + W E
Sbjct: 698 FCCLDPVLTIAASLSFKDP-FVIPLGKEKIADARRKELAKDTRSDHLTVVNAFEGWEEAR 756
Query: 540 -----YSTEWCRENYIQVSSMKRARDIRDQ 564
Y ++C E ++ ++++ +++ Q
Sbjct: 757 RRGFRYEKDYCWEYFLSSNTLQMLHNMKGQ 786
Score = 264 (98.0 bits), Expect = 1.2e-51, Sum P(3) = 1.2e-51
Identities = 70/199 (35%), Positives = 108/199 (54%)
Query: 88 ETGSGKTTQIPQYLYEPRWVAAMSVAARVSQEMGVKLG--HEVGYSIRFEDCTSDKT-VL 144
E G G +I +PR ++A+SVA RV+ E G + GY IR + K +
Sbjct: 250 ERGKGSACRI--VCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSI 307
Query: 145 KYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSA 204
Y T ++L+ + +P L S S +++DE ER L +D L ++KDL+N+R DLK+++ SA
Sbjct: 308 LYCTTGIILQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSA 367
Query: 205 TLDAEKFSDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAA-IVTALQIHVNEPTGDIL 263
TL+AEKFS+YFG+ P+ IPG +PV + + D IE V + H ++ +
Sbjct: 368 TLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLE----DVIEKIRYVPEQKEHRSQFKRGFM 423
Query: 264 VFLTGQDEIERAEEILKQR 282
+ E E E I K+R
Sbjct: 424 QGHVNRQEKEEKEAIYKER 442
Score = 115 (45.5 bits), Expect = 1.2e-51, Sum P(3) = 1.2e-51
Identities = 36/110 (32%), Positives = 54/110 (49%)
Query: 2 NPFDAWEKQ--QREKCTFEIEDK-IVDFFSESVF-----DGDNFDEFESELPNKSVVKST 53
N D EK+ +EK F I ++ +D SE + DG + +L K
Sbjct: 138 NKLDIQEKKLINQEKKMFRIRNRSYIDRDSEYLLQENEPDGTLDQKLLEDLQKKKNDLRY 197
Query: 54 LEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE 103
+EM Q R+ LP Y +EL+ + + V I GETG GKTTQ+ Q++ +
Sbjct: 198 IEM-QHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILD 246
Score = 60 (26.2 bits), Expect = 2.1e-30, Sum P(3) = 2.1e-30
Identities = 19/57 (33%), Positives = 27/57 (47%)
Query: 226 RRYPVELF-YTKAPEVDYIEAAIVTAL--QIHVNEPTGDILVFLTGQDEIERAEEIL 279
RRY + E D ++ ++ AL I + E G ILVFL G D I ++L
Sbjct: 452 RRYSASTVDVIEMMEDDKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLL 508
>RGD|2318361 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:2318361
GO:GO:0005739 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OrthoDB:EOG43FGW2 GeneTree:ENSGT00550000074257
IPI:IPI00372028 Ensembl:ENSRNOT00000013854 Uniprot:D3ZHW0
Length = 1366
Score = 299 (110.3 bits), Expect = 1.3e-51, Sum P(3) = 1.3e-51
Identities = 91/319 (28%), Positives = 152/319 (47%)
Query: 260 GDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERAR 319
G +L+FL G I++ ++L R + +LI +++ L T+ QA F P R
Sbjct: 868 GAVLIFLPGLAHIQQLYDLLSNDRRFYSERY-QLIA--LHSVLSTQDQAAAFMLPPPGVR 924
Query: 320 KVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSER 379
K+VLATNIAET +TI + +VI G K Y+ + M SL+ +SKASA QR G + R
Sbjct: 925 KIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 984
Query: 380 TGPGKCFRLYTLHNYHRIWM----TILCQKYNELIWKMLSLFSNVLVNF--DFIDPPXXX 433
G CFRLYT + IL EL ++ +F +DPP
Sbjct: 985 VRDGFCFRLYTRERFEGFLEYSVPEILRVPLEELCLHIMKCDLGSPEDFLSKALDPPQPQ 1044
Query: 434 XXXXXXXXXXXXGALNKAG-QLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAM 492
GA + +LT +G+ +A P++ K+ K ++ + C + + T+AA+
Sbjct: 1045 VISNAMNLLRKIGACEPSEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLEPVATLAAV 1104
Query: 493 LFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWR----ECNYSTE--WCR 546
+ S F P ++ AD A+ + + D D + + Y W+ E + +E +C+
Sbjct: 1105 M-TEKSPFITPIGRKDEADLAKSSLAVAD-SDHLTIYNAYLGWKKAQQEGGFRSEISYCQ 1162
Query: 547 ENYIQVSSMKRARDIRDQL 565
N++ +S+ D++ +L
Sbjct: 1163 RNFLNRTSLLTLEDVKQEL 1181
Score = 263 (97.6 bits), Expect = 1.3e-51, Sum P(3) = 1.3e-51
Identities = 58/137 (42%), Positives = 87/137 (63%)
Query: 103 EPRWVAAMSVAARVSQEMGVKLGHE-----VGYSIRFEDCTSDKTVLKYMTDCMLLREIV 157
+PR ++A+S+A RV +E+G + G GY IR E S+ T L Y T +LLR++
Sbjct: 629 QPRRISAVSLATRVCEELGCEGGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQ 688
Query: 158 IEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGS 217
+ L S +IVDE ER++ +D L +LK+++ R DL L++ SAT+D++KFS YF
Sbjct: 689 EDGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRSDLHLILMSATVDSDKFSTYFTH 748
Query: 218 APIFKIPGRRYPVELFY 234
PI +I GR YPVE+F+
Sbjct: 749 CPILRISGRSYPVEVFH 765
Score = 106 (42.4 bits), Expect = 1.3e-51, Sum P(3) = 1.3e-51
Identities = 18/49 (36%), Positives = 33/49 (67%)
Query: 55 EMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE 103
+ L +ER+ LP++ +++ + + V+ + GETGSGK+TQ+P +L E
Sbjct: 563 QRLLKERQQLPVFKHRASIVETLKRHRVVVVAGETGSGKSTQVPHFLLE 611
Score = 46 (21.3 bits), Expect = 6.5e-25, Sum P(3) = 6.5e-25
Identities = 14/49 (28%), Positives = 21/49 (42%)
Query: 337 IKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKC 385
+K V GF+ S+ K G ++L I+ A GL + G C
Sbjct: 1182 MKLVRAAGFSSSTSWEGKKGPQALSFQDIALLKAVLAAGLYDSVGKIMC 1230
>UNIPROTKB|F1P1F4 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0042645
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00593383 OMA:LHKEERY EMBL:AADN02000053
Ensembl:ENSGALT00000008045 Uniprot:F1P1F4
Length = 1231
Score = 285 (105.4 bits), Expect = 1.6e-51, Sum P(3) = 1.6e-51
Identities = 86/309 (27%), Positives = 142/309 (45%)
Query: 251 LQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKI 310
LQI + G IL FL G EI+ ++ L + LG++ + ++ P+++N+P Q I
Sbjct: 703 LQIDAHGEPGGILCFLPGWQEIKGVQQRLLEM---LGSQNSRYLVLPVHSNIPMMDQQNI 759
Query: 311 FEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASA 370
F+ P RK+VLATNIAETS+TI+ I +V+ G K + Y+ KT + L +SK++
Sbjct: 760 FQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSKSNV 819
Query: 371 NQRTGLSERTGPGKCFRLYTLHNYHRI--WMT--ILCQKYNELIWKM-LSLFSNVLVNF- 424
QR G + R G + L+ ++ + IL L+ + + + V F
Sbjct: 820 VQRRGRAGRCQSGFAYHLFPRSRLDKMPTYQVPEILRTPLENLVVQAKIHMPEKTAVEFL 879
Query: 425 -DFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCS 483
+D P G L++ LT +G+++A+ DP+L+K IV Y+C
Sbjct: 880 SKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGKRLAQISTDPRLAKAIVLASIYRCL 939
Query: 484 DEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWREC-NYST 542
++ I + L F + D A+ D +A +R W E
Sbjct: 940 HPLLVIVSCLT--RDPFSSSLQNRAEVDKAKAVLSRESGSDHLAFVRAVAGWEEVLRRRD 997
Query: 543 EWCRENYIQ 551
R+NY+Q
Sbjct: 998 SRARDNYLQ 1006
Score = 275 (101.9 bits), Expect = 1.6e-51, Sum P(3) = 1.6e-51
Identities = 59/144 (40%), Positives = 89/144 (61%)
Query: 92 GKTTQIPQYLYEPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKT-VLKYMTDC 150
G+ + + +PR ++A+SVA RV+QE+G + VGY +R E + L + T
Sbjct: 523 GRGARCNVVITQPRRISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVG 582
Query: 151 MLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEK 210
+LLR++ PSLE S ++VDE ER ++TD L LLK + PDL+L++ SAT D ++
Sbjct: 583 ILLRKLQGNPSLEGVSHVVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATGDNQR 642
Query: 211 FSDYFGSAPIFKIPGRRYPVELFY 234
FS YFG P+ K+PG YPV+ +Y
Sbjct: 643 FSHYFGDCPVVKVPGFMYPVKEYY 666
Score = 107 (42.7 bits), Expect = 1.6e-51, Sum P(3) = 1.6e-51
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 59 EERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE 103
+E LP+ P + +L A+ PV+ I G+TG GKTT+IPQ L E
Sbjct: 473 QESHPLPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLE 517
Score = 38 (18.4 bits), Expect = 9.8e-26, Sum P(3) = 9.8e-26
Identities = 18/80 (22%), Positives = 34/80 (42%)
Query: 232 LFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEE-----ILKQRTRGL 286
+F + +V + ++T IHV + V LT D + + +L+ L
Sbjct: 1129 VFVRDSSQVHPLAVLLMTDTDIHVRDDGWRATVSLTDSDLLVLEGDSYTIRLLRDFRVSL 1188
Query: 287 GTKIAELIICPIYANLPTEL 306
+K+ E +C A +P +L
Sbjct: 1189 -SKMVETCLCYEMAAIPGDL 1207
>UNIPROTKB|Q5ZI74 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0042645
"mitochondrial nucleoid" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0042645 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AJ720910 IPI:IPI00593383
RefSeq:NP_001012869.1 UniGene:Gga.2762 ProteinModelPortal:Q5ZI74
SMR:Q5ZI74 GeneID:420376 KEGG:gga:420376 InParanoid:Q5ZI74
NextBio:20823291 Uniprot:Q5ZI74
Length = 1231
Score = 285 (105.4 bits), Expect = 1.6e-51, Sum P(3) = 1.6e-51
Identities = 86/309 (27%), Positives = 142/309 (45%)
Query: 251 LQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKI 310
LQI + G IL FL G EI+ ++ L + LG++ + ++ P+++N+P Q I
Sbjct: 703 LQIDAHGEPGGILCFLPGWQEIKGVQQRLLEM---LGSQNSRYLVLPVHSNIPMMDQQNI 759
Query: 311 FEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASA 370
F+ P RK+VLATNIAETS+TI+ I +V+ G K + Y+ KT + L +SK++
Sbjct: 760 FQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSKSNV 819
Query: 371 NQRTGLSERTGPGKCFRLYTLHNYHRI--WMT--ILCQKYNELIWKM-LSLFSNVLVNF- 424
QR G + R G + L+ ++ + IL L+ + + + V F
Sbjct: 820 VQRRGRAGRCQSGFAYHLFPRSRLDKMPTYQVPEILRTPLENLVVQAKIHMPEKTAVEFL 879
Query: 425 -DFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCS 483
+D P G L++ LT +G+++A+ DP+L+K IV Y+C
Sbjct: 880 SKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGKRLAQISTDPRLAKAIVLASIYRCL 939
Query: 484 DEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWREC-NYST 542
++ I + L F + D A+ D +A +R W E
Sbjct: 940 HPLLVIVSCLT--RDPFSSSLQNRAEVDKAKAVLSRESGSDHLAFVRAVAGWEEVLRRRD 997
Query: 543 EWCRENYIQ 551
R+NY+Q
Sbjct: 998 SRARDNYLQ 1006
Score = 275 (101.9 bits), Expect = 1.6e-51, Sum P(3) = 1.6e-51
Identities = 59/144 (40%), Positives = 89/144 (61%)
Query: 92 GKTTQIPQYLYEPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKT-VLKYMTDC 150
G+ + + +PR ++A+SVA RV+QE+G + VGY +R E + L + T
Sbjct: 523 GRGARCNVVITQPRRISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVG 582
Query: 151 MLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEK 210
+LLR++ PSLE S ++VDE ER ++TD L LLK + PDL+L++ SAT D ++
Sbjct: 583 ILLRKLQGNPSLEGVSHVVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATGDNQR 642
Query: 211 FSDYFGSAPIFKIPGRRYPVELFY 234
FS YFG P+ K+PG YPV+ +Y
Sbjct: 643 FSHYFGGCPVVKVPGFMYPVKEYY 666
Score = 107 (42.7 bits), Expect = 1.6e-51, Sum P(3) = 1.6e-51
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 59 EERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE 103
+E LP+ P + +L A+ PV+ I G+TG GKTT+IPQ L E
Sbjct: 473 QESHPLPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLE 517
Score = 38 (18.4 bits), Expect = 9.8e-26, Sum P(3) = 9.8e-26
Identities = 18/80 (22%), Positives = 34/80 (42%)
Query: 232 LFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEE-----ILKQRTRGL 286
+F + +V + ++T IHV + V LT D + + +L+ L
Sbjct: 1129 VFVRDSSQVHPLAVLLMTDTDIHVRDDGWRATVSLTDSDLLVLEGDSYTIRLLRDFRVSL 1188
Query: 287 GTKIAELIICPIYANLPTEL 306
+K+ E +C A +P +L
Sbjct: 1189 -SKMVETCLCYEMAAIPGDL 1207
>UNIPROTKB|E2QXW1 [details] [associations]
symbol:DQX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:165545 KO:K14433 OMA:CGQAVQA
EMBL:AAEX03010965 RefSeq:XP_532994.2 Ensembl:ENSCAFT00000013395
GeneID:475784 KEGG:cfa:475784 NextBio:20851558 Uniprot:E2QXW1
Length = 719
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 157/536 (29%), Positives = 268/536 (50%)
Query: 69 FWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE----------------PRWVAAMSV 112
F E+L + SG V+ + GE GSGK+TQIPQ+ E P +AA+S+
Sbjct: 54 FLEQLESSPSG--VVLVSGEPGSGKSTQIPQWCAEFALARGFKEGRVTVTQPYPLAALSL 111
Query: 113 AARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDE 172
A RV+ EM + LG EVGYSI EDCT T+L++ D +LL+E+ ++ VL++DE
Sbjct: 112 AVRVADEMDLTLGQEVGYSIPQEDCTGPDTLLRFCWDRLLLQEVASTRGTGAWGVLVLDE 171
Query: 173 AQERTLSTDNLFGLLKD--LINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIP-GR-RY 228
AQER++++D L GLL++ L N D ++++ + K ++G+ I +P G
Sbjct: 172 AQERSVASDLLQGLLRNAKLGNLPGDSRVVVVTDPALEPKLQAFWGNPTIVHVPRGPGAC 231
Query: 229 PVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGT 288
P ++ P D +EAA L++ E GD+LV+L ++EI + E L + L
Sbjct: 232 PTPVYRDIVP-TDRVEAACQAVLELCAKEAPGDVLVYLPSEEEILQCCESLSREVEPLAL 290
Query: 289 KIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKV 348
+ + P++ +QA +E ARKVV+ +A+ S ++ I++VI G
Sbjct: 291 RGPPPRVLPLHPGHGPAVQAA-YEDIDLGARKVVVTHWLADFSFSLPSIRHVIDSGLELR 349
Query: 349 KSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIWMTILC--QKY 406
YNP+ ES ++ PIS+ A R + PG C LY ++ + +L +
Sbjct: 350 SVYNPQIRAESQVLRPISRCQAEARRLRARGIPPGSCICLYP-ESFLELEAPLLPPPRVC 408
Query: 407 NELIWKMLSLFSNVLV----NFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMA 462
E + M+ L + F+D P AL+ G L+ +G ++
Sbjct: 409 EENLSPMVLLLKRRQIAEPGECHFLDRPAPEALMQALEDLDYLAALDDDGNLSDLGVILS 468
Query: 463 EFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDV 522
EFP+ P+L+K +++ ++ C DE++T+AAML + P + A+ A + L
Sbjct: 469 EFPLPPELAKALLASCEFDCVDEMLTLAAMLTAAPGFTHPP----LSAEEAALRRALEHA 524
Query: 523 -GDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVEIDTS 577
GD +L++VY + + WC+ + +++ +A+ +R +L L ++E+ S
Sbjct: 525 DGDHSSLIQVYEAFIQSGADEAWCQARGLNWAALCQAQKLRGELLELMQQIELPLS 580
>TIGR_CMR|GSU_1838 [details] [associations]
symbol:GSU_1838 "ATP-dependent helicase HrpB"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004386 "helicase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI InterPro:IPR010225 InterPro:IPR013689
Pfam:PF08482 PIRSF:PIRSF005496 TIGRFAMs:TIGR01970
HOGENOM:HOG000244610 RefSeq:NP_952888.1 ProteinModelPortal:Q74C37
DNASU:2688652 GeneID:2688652 KEGG:gsu:GSU1838 PATRIC:22026533
ProtClustDB:CLSK828597 BioCyc:GSUL243231:GH27-1781-MONOMER
Uniprot:Q74C37
Length = 846
Score = 537 (194.1 bits), Expect = 3.3e-51, P = 3.3e-51
Identities = 142/448 (31%), Positives = 226/448 (50%)
Query: 64 LPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLY-------------EPRWVAAM 110
LP+ +LL A+ + G+GKTT++P L EPR +AA
Sbjct: 4 LPVDDVIPDLLTALEQRNAAVLQAPPGAGKTTRVPLALLDAPWLNGKRIIMLEPRRLAAT 63
Query: 111 SVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIV 170
+ A +++ +G + G VGY+IRF+ S +T ++ +T+ +L R + +P LE +I
Sbjct: 64 NAARWMARSLGEEAGATVGYAIRFDRRVSARTRVEVVTEGILTRRLQSDPLLEGVGAVIF 123
Query: 171 DEAQERTLSTDNLFGLLKDL-INYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYP 229
DE ER++ +D L +D+ R DL++++ SAT+ A + G AP+ GR YP
Sbjct: 124 DEFHERSIHSDLALALCRDVQAGLREDLRIIVMSATMAAAPVAALLGDAPVITSEGRNYP 183
Query: 230 VELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTK 289
V L + + + + +A+ A++I V E GDIL FL G EI R ++L
Sbjct: 184 VALRHIPPNDRENLPSAVARAVRIAVRECEGDILAFLPGVGEIRRCGQLLADDP----PL 239
Query: 290 IAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVK 349
A L++ P+Y +LP Q + P P R RKVVLAT IAETSLTI+G++ V+ G +
Sbjct: 240 HAPLVV-PLYGDLPFVEQERAILPVPGR-RKVVLATTIAETSLTIEGVRVVVDGGQTRRL 297
Query: 350 SYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIWMT----ILCQK 405
Y+P +G+ L+ +S ASA QR G + R GPG C+RL+ H+ + IL
Sbjct: 298 RYDPASGLNRLVTERVSAASATQRAGRAGRLGPGTCYRLWPEHDQQALLAADPPEILIAD 357
Query: 406 YNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFP 465
L + + + ++DPP AL+ G +T GR+MAE P
Sbjct: 358 LAPLALDLAHWGVSDPASLAWLDPPPRGALEEARNLLKSLDALDGQGMITETGRRMAELP 417
Query: 466 IDPKLSKTIVSLDKYKCSDEIITIAAML 493
+ P+L+ ++ + + +AA+L
Sbjct: 418 LHPRLAHMLLRATERGPAPLACDVAALL 445
>UNIPROTKB|P37024 [details] [associations]
symbol:hrpB "predicted ATP-dependent helicase"
species:83333 "Escherichia coli K-12" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 GO:GO:0008026
EMBL:D42122 PIR:D64738 RefSeq:NP_414690.4 RefSeq:YP_488451.1
ProteinModelPortal:P37024 SMR:P37024 DIP:DIP-9938N IntAct:P37024
MINT:MINT-1231977 PRIDE:P37024 EnsemblBacteria:EBESCT00000000663
EnsemblBacteria:EBESCT00000016535 GeneID:12932407 GeneID:944845
KEGG:ecj:Y75_p0145 KEGG:eco:b0148 PATRIC:32115403 EchoBASE:EB2233
EcoGene:EG12329 HOGENOM:HOG000244609 KO:K03579 OMA:GILTRMI
ProtClustDB:PRK11664 BioCyc:EcoCyc:EG12329-MONOMER
BioCyc:ECOL316407:JW0144-MONOMER Genevestigator:P37024
InterPro:IPR010225 InterPro:IPR013689 Pfam:PF08482
PIRSF:PIRSF005496 TIGRFAMs:TIGR01970 Uniprot:P37024
Length = 809
Score = 535 (193.4 bits), Expect = 3.7e-51, P = 3.7e-51
Identities = 151/451 (33%), Positives = 227/451 (50%)
Query: 63 TLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLY------------EPRWVAAM 110
+LP+ ELL A+ P + + TG+GK+T +P L EPR +AA
Sbjct: 3 SLPVAAVLPELLTALDCAPQVLLSAPTGAGKSTWLPLQLLAHPGINGKIILLEPRRLAAR 62
Query: 111 SVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIV 170
+VA R+++ + K G VGY +R ++C T L+ +T+ +L R I +P L ++I+
Sbjct: 63 NVAQRLAELLNEKPGDTVGYRMRAQNCVGPNTRLEVVTEGVLTRMIQRDPELSGVGLVIL 122
Query: 171 DEAQERTLSTDNLFGLLKDLIN-YRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYP 229
DE ER+L D LL D+ R DLKLLI SATLD ++ AP+ GR +P
Sbjct: 123 DEFHERSLQADLALALLLDVQQGLRDDLKLLIMSATLDNDRLQQMLPEAPVVISEGRSFP 182
Query: 230 VELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTK 289
VE Y P + A+ A + + +G +L+FL G EI+R +E L R +G+
Sbjct: 183 VERRYLPLPAHQRFDDAVAVATAEMLRQESGSLLLFLPGVGEIQRVQEQLASR---IGS- 238
Query: 290 IAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVK 349
++++CP+Y L Q K P P+ RKVVLATNIAETSLTI+GI+ V+ +V
Sbjct: 239 --DVLLCPLYGALSLNDQRKAILPAPQGMRKVVLATNIAETSLTIEGIRLVVDCAQERVA 296
Query: 350 SYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIWMT----ILCQK 405
++P+TG+ L+ +S+AS QR G + R PG L R IL
Sbjct: 297 RFDPRTGLTRLITQRVSQASMTQRAGRAGRLEPGISLHLIAKEQAERAAAQSEPEILQSD 356
Query: 406 YNELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFP 465
+ L+ ++L + ++D P GAL + +L+ G++MA
Sbjct: 357 LSGLLMELLQWGCSDPAQMSWLDQPPVVNLLAAKRLLQMLGAL-EGERLSAQGQKMAALG 415
Query: 466 IDPKLSKTIVSLDKYKCSDEIIT---IAAML 493
DP+L+ +VS K DE T IAA+L
Sbjct: 416 NDPRLAAMLVSA---KNDDEAATAAKIAAIL 443
>POMBASE|SPBC15C4.05 [details] [associations]
symbol:SPBC15C4.05 "ATP-dependent RNA/DNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPBC15C4.05 GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GO:GO:0003676 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 PIR:T39475 RefSeq:NP_595925.1
ProteinModelPortal:O60114 EnsemblFungi:SPBC15C4.05.1 GeneID:2539831
KEGG:spo:SPBC15C4.05 OrthoDB:EOG4TXG12 NextBio:20800979
Uniprot:O60114
Length = 1428
Score = 307 (113.1 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 88/318 (27%), Positives = 152/318 (47%)
Query: 262 ILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKV 321
+LVFL G EI R + +++ + + I +++ L + Q +F P+ RK+
Sbjct: 906 VLVFLPGISEILRVKSLIEDMPMFRNHR--KFCIYMLHSTLSSAQQQSVFNIPPKGCRKI 963
Query: 322 VLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTG 381
VL+TNIAET +TI + VI G + YN + + L +SKA+A QR+G + R
Sbjct: 964 VLSTNIAETGVTIPDVTCVIDTGVHREMRYNSRRHLSRLTDTFVSKANAKQRSGRAGRVQ 1023
Query: 382 PGKCFRLYTLHNYHRIWMT-----ILCQKYNELIW--KMLSLFSNVLVNFDFIDPPXXXX 434
G C+ L++ + +++ IL E++ KM + V +DPP
Sbjct: 1024 EGICYHLFSKFKHDTQFLSYQTPEILRLNLQEVVLRVKMCQMGDVQDVLGKALDPPSSTN 1083
Query: 435 XXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLF 494
GAL++ +LT++G+ +++ P+D L K +V YKC D +I AML
Sbjct: 1084 IIRALEKLHQVGALSENEKLTKLGKFLSQLPVDANLGKILVLGCFYKCVDAASSIVAMLT 1143
Query: 495 VGNSIFYRPKDKQIYADNARMNFHLGDV-GDRIALLRVYNCWRECNYST------EWCRE 547
+G S F + D + A+ AR++F + D + + Y WRE S + +E
Sbjct: 1144 IG-SPFRKSVDNEFSANKARLSFAKENTRSDLVLMYYAYCAWREICLSPLGPDEDSFAKE 1202
Query: 548 NYIQVSSMKRARDIRDQL 565
Y+ + ++ ++ QL
Sbjct: 1203 KYLNLEALSMTESLKIQL 1220
Score = 306 (112.8 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 97/287 (33%), Positives = 144/287 (50%)
Query: 35 DNFDEFES-ELPNKSVVKSTLEMLQEE--------RKTLPIYPFWEELLQAVSGYPVLAI 85
DN +F E P ++++ + L+ E R LP F E ++ AV+ +L I
Sbjct: 593 DNIGKFSGFERPPETLLNKWRQQLESESAEKFKVFRNQLPATMFRETIIDAVNNSQLLII 652
Query: 86 VGETGSGKTTQIPQYL-------------Y--EPRWVAAMSVAARVSQEMGVK----LGH 126
G+TG GK+TQIP +L Y EPR ++A+S+A RVSQE+G H
Sbjct: 653 SGDTGCGKSTQIPAFLLENSTKNGKAVKIYVTEPRRISAISLANRVSQELGGNPPSARSH 712
Query: 127 E-VGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFG 185
E VGYS+R + + T L Y+T LR + + +ES + LI+DE ER++ +D L
Sbjct: 713 ELVGYSVRLDSKCTPLTPLTYVTTGTFLRLLEVGNEIESVTHLIIDEVHERSIDSDLLLI 772
Query: 186 LLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEA 245
+ L+ P LK++I SATL+AEKF YF + + IPG+ YPV FY + D +
Sbjct: 773 HVLHLLKQHPHLKIIIMSATLNAEKFQLYFEGSNLITIPGKTYPVHRFYLE----DILS- 827
Query: 246 AIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAE 292
Q ++ G+ GQD IE + Q+ + K AE
Sbjct: 828 ------QFGNDKSFGNA----AGQDVIEEDDYETDQQDASISNKSAE 864
Score = 38 (18.4 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 196 DLKLLISSATLDAEKFSDYFGSAPIFKI 223
DLK ++ +ATL A DY +F++
Sbjct: 503 DLKTVLPTATLAA----DYISMIVLFRL 526
>RGD|1308767 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10116 "Rattus norvegicus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA;ISO]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308767 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
GeneTree:ENSGT00550000074257 CTD:170506 KO:K14442 OMA:RIRNRSY
OrthoDB:EOG4K6G3J EMBL:CH474003 IPI:IPI00367998
RefSeq:NP_001101148.1 UniGene:Rn.2744 Ensembl:ENSRNOT00000019824
GeneID:310461 KEGG:rno:310461 UCSC:RGD:1308767 NextBio:662035
Uniprot:D4A2Z8
Length = 1000
Score = 354 (129.7 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 98/339 (28%), Positives = 161/339 (47%)
Query: 241 DYIEAAIVTAL--QIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPI 298
D ++ ++ AL I + E G ILVFL G D I ++L + K +I P+
Sbjct: 460 DKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVM---FKSDRFLIIPL 516
Query: 299 YANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGME 358
++ +PT Q ++F+ TP RK+V+ATNIAETS+TID + YVI G K ++ + +
Sbjct: 517 HSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIS 576
Query: 359 SLLVNPISKASANQRTGLSERTGPGKCFRLYT------LHNYHRIWMTILCQKYNELIWK 412
++ +SKA+A QR G + R PG C+ LY L +Y IL EL +
Sbjct: 577 TMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQL--PEILRTPLEELCLQ 634
Query: 413 MLSLFSNVLVNF--DFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKL 470
+ L + F +DPP AL+K +LT +G +A P++P +
Sbjct: 635 IKILRLGGIAYFLSRLMDPPSDEAVVLSIKHLMELSALDKQEELTPLGVHLARLPVEPHI 694
Query: 471 SKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLR 530
K I+ + C D ++TIAA L + F P K+ AD R D + ++
Sbjct: 695 GKMILFGALFCCLDPVLTIAASLSFKDP-FVIPLGKEKIADARRKELAKETRSDHLTVVN 753
Query: 531 VYNCWRECN-----YSTEWCRENYIQVSSMKRARDIRDQ 564
+ W E Y ++C E ++ ++++ +++ Q
Sbjct: 754 AFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQ 792
Score = 249 (92.7 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 57/146 (39%), Positives = 88/146 (60%)
Query: 88 ETGSGKTTQIPQYLYEPRWVAAMSVAARVSQEMGVKLGH--EVGYSIRFEDCTSDKT-VL 144
E G G +I +PR ++A+SVA RV+ E G+ GY IR + K +
Sbjct: 242 ERGIGSACRI--VCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSI 299
Query: 145 KYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSA 204
Y T ++L+ + + L S S +++DE ER L +D L ++KDL+++R DLK+++ SA
Sbjct: 300 LYCTTGIILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSA 359
Query: 205 TLDAEKFSDYFGSAPIFKIPGRRYPV 230
TL+AEKFS+YFG+ P+ IPG +PV
Sbjct: 360 TLNAEKFSEYFGNCPMIHIPGFTFPV 385
Score = 123 (48.4 bits), Expect = 2.0e-37, Sum P(2) = 2.0e-37
Identities = 39/120 (32%), Positives = 59/120 (49%)
Query: 5 DAWEKQ--QREKCTFEIEDK-IVDFFSESVFDGDN----FDE-FESELPNKSVVKSTLEM 56
D EK+ +EK T+ I DK +D SE + + D+ +L K +EM
Sbjct: 133 DNQEKKLLNQEKKTYRITDKSYIDRDSEYLLQQNEPNLGLDQQLLEDLQKKKTDPRYIEM 192
Query: 57 LQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYEPRWVAAMSVAARV 116
Q RK LP Y +EL+ ++ + V I GETG GKTTQ+ Q++ + + A R+
Sbjct: 193 -QRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILDNYIERGIGSACRI 251
>UNIPROTKB|Q5THQ9 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002464
PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AL023803
UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI01009669 SMR:Q5THQ9
Ensembl:ENST00000441485 HOGENOM:HOG000202213 HOVERGEN:HBG079487
Uniprot:Q5THQ9
Length = 302
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 124/298 (41%), Positives = 179/298 (60%)
Query: 42 SELPNKSVVKSTLEMLQEERKTLPIY-PFW----EELLQAVSGYPVLAIVGETGSGKTTQ 96
+E P S+ + + L E T +Y P+ E+ Q + + LA G T G+
Sbjct: 11 TEGPGVSISEER-QSLAENSGTTVVYNPYAALSIEQQRQKLPVFKYLAEAGWTAEGRVVG 69
Query: 97 IPQYLYEPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSD-KTVLKYMTDCMLLRE 155
+ Q PR VAA++VA RV++E G LGHEVGY IRF+DCT T +K++TD ML+RE
Sbjct: 70 VTQ----PRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVRE 125
Query: 156 IVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYF 215
++++P L YSV+++DEA ERTL TD GLLK + R DL+L+++SATLDA+KF D+F
Sbjct: 126 MMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFF 185
Query: 216 G----SAP------IFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVF 265
S P I + GR +PV++FY ++P DYI++ + T ++IH E GD+L F
Sbjct: 186 NQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAF 245
Query: 266 LTGQDEIERAEEILKQRTRGL---GTKIAELIICPIYANLPTELQAKIFEPTPERARK 320
LTGQ+E+E +L ++ R L G K L + P+YA LP+ Q K+FE RK
Sbjct: 246 LTGQEEVETVVSMLIEQARALARTGMK-RHLRVLPMYAGLPSFEQMKVFERVSRSVRK 302
>TAIR|locus:2196265 [details] [associations]
symbol:AT1G58060 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
IPI:IPI00533149 RefSeq:NP_176103.2 UniGene:At.27872
ProteinModelPortal:F4I9Q5 SMR:F4I9Q5 PRIDE:F4I9Q5
EnsemblPlants:AT1G58060.1 GeneID:842173 KEGG:ath:AT1G58060
OMA:FLSYKSP Uniprot:F4I9Q5
Length = 1459
Score = 320 (117.7 bits), Expect = 4.7e-50, Sum P(4) = 4.7e-50
Identities = 90/292 (30%), Positives = 148/292 (50%)
Query: 241 DYIEAAIVTALQIHVNEPT--GDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPI 298
D I+ ++ L H+++ G IL+FL G EI ++L R G A+ ++ P+
Sbjct: 895 DRIDYELLEELICHIDDTCEEGAILIFLPGVAEIYMLLDMLAASYRFRGPA-ADWLL-PL 952
Query: 299 YANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGME 358
++++ + Q K+F P+ RKV+ ATNIAETS+TID + YVI G K YNP+ +
Sbjct: 953 HSSIASSEQRKVFLRPPKGLRKVIAATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLS 1012
Query: 359 SLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIWMT-----ILCQKYNELIWKM 413
S++ + IS+A+A QRTG + R PG CF LYT + + ++ +L EL ++
Sbjct: 1013 SMVEDWISQANARQRTGRAGRVKPGICFSLYTRYRFEKLMRPYQVPEMLRMPLVELCLQI 1072
Query: 414 LSLFSNVLVNF--DFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLS 471
L + F ++PP GA+ +LT +G +A+ P+D +
Sbjct: 1073 KLLGLGHIKPFLSRALEPPSEGAMTSAISLLHEVGAVEGDEELTPLGHHLAKLPVDVLIG 1132
Query: 472 KTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVG 523
K ++ + C I++IAA L + Y PKD++ D ++ L D G
Sbjct: 1133 KMLLYGGIFGCLSPILSIAAFLSYKSPFIY-PKDEKQNVDRVKLAL-LSDNG 1182
Score = 219 (82.2 bits), Expect = 4.7e-50, Sum P(4) = 4.7e-50
Identities = 59/155 (38%), Positives = 87/155 (56%)
Query: 103 EPRWVAAMSVAARVSQEMGVKL-GHE---VGYSIRFEDCTSDKTVLKYMTDCMLLREIVI 158
+PR +AA+SVA RV+ E G + VGY +R E SDKT L + T +LLR++
Sbjct: 670 QPRRIAAISVAQRVADERCESSPGLDDSLVGYQVRLESARSDKTRLLFCTTGILLRKLAG 729
Query: 159 EPSLESYSVLIVDEAQERTLSTDNLFGLLKDLI------NYRPDLKLLISSATLDAEKFS 212
+ +L + +IVDE ER+L D L +LK LI N LK+++ SAT+DA+ FS
Sbjct: 730 DRTLNDVTHIIVDEVHERSLLGDFLLIILKSLIEKQSCDNTSRKLKVILMSATVDADLFS 789
Query: 213 DYFGSAPIFKIPGRRYPVELFYTKA--PEVDYIEA 245
YFG P+ GR +PV + + ++Y+ A
Sbjct: 790 RYFGHCPVITAQGRTHPVTTHFLEEIYESINYLLA 824
Score = 105 (42.0 bits), Expect = 4.7e-50, Sum P(4) = 4.7e-50
Identities = 24/58 (41%), Positives = 34/58 (58%)
Query: 46 NKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE 103
NK + +ML+ R LPI +LQ + VL + GETGSGKTTQ+PQ++ +
Sbjct: 597 NKKRTQKYKDMLKT-RTALPISEVKNGILQHLKEKDVLVVCGETGSGKTTQVPQFILD 653
Score = 49 (22.3 bits), Expect = 4.7e-50, Sum P(4) = 4.7e-50
Identities = 13/55 (23%), Positives = 24/55 (43%)
Query: 524 DRIALLRVYNCW------RECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARV 572
D + ++ Y+ W R + +C ++ S M+ RD+R Q L A +
Sbjct: 1196 DHLLMMVAYDKWVKILQERGMKAAQRFCESKFLSSSVMRMIRDMRVQFGTLLADI 1250
Score = 49 (22.3 bits), Expect = 3.0e-44, Sum P(4) = 3.0e-44
Identities = 20/66 (30%), Positives = 29/66 (43%)
Query: 2 NPFDAWEKQQREKCTFEIEDKIVDFF-----SESVFDGDNFDEFESELPNKSVVKSTLEM 56
NP +++E ++ + DF SE V GD F FE E+P + L
Sbjct: 323 NPAESYESEEIQTKALPSSSSGQDFVASDEDSEDVELGDTF--FE-EIPPSEISPHELLE 379
Query: 57 LQEERK 62
LQ+E K
Sbjct: 380 LQKEEK 385
>FB|FBgn0002774 [details] [associations]
symbol:mle "maleless" species:7227 "Drosophila melanogaster"
[GO:0005700 "polytene chromosome" evidence=IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;TAS] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0007549 "dosage compensation"
evidence=NAS;IMP;TAS] [GO:0009047 "dosage compensation by
hyperactivation of X chromosome" evidence=NAS] [GO:0045433 "male
courtship behavior, veined wing generated song production"
evidence=IGI] [GO:0016456 "X chromosome located dosage compensation
complex, transcription activating" evidence=NAS;TAS] [GO:0005694
"chromosome" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0016457 "dosage
compensation complex assembly involved in dosage compensation by
hyperactivation of X chromosome" evidence=TAS] [GO:0003724 "RNA
helicase activity" evidence=NAS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0048675 "axon extension" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0000805 "X chromosome" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0005665 "DNA-directed RNA polymerase II, core
complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 EMBL:AE013599 GO:GO:0005524 GO:GO:0008340
Gene3D:3.30.160.20 GO:GO:0045944 GO:GO:0000785 GO:GO:0003682
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045433 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0048675 GO:GO:0003724
GeneTree:ENSGT00550000074257 KO:K13184 OMA:DDWIRLQ GO:GO:0016456
EMBL:M74121 EMBL:BT003785 EMBL:BT010267 PIR:B40025
RefSeq:NP_476641.1 RefSeq:NP_724440.1 UniGene:Dm.2901
ProteinModelPortal:P24785 SMR:P24785 IntAct:P24785 MINT:MINT-768581
STRING:P24785 PaxDb:P24785 PRIDE:P24785 EnsemblMetazoa:FBtr0086031
GeneID:35523 KEGG:dme:Dmel_CG11680 CTD:35523 FlyBase:FBgn0002774
InParanoid:P24785 OrthoDB:EOG47H44V PhylomeDB:P24785
GenomeRNAi:35523 NextBio:793836 Bgee:P24785 GermOnline:CG11680
GO:GO:0016457 Uniprot:P24785
Length = 1293
Score = 331 (121.6 bits), Expect = 7.0e-50, Sum P(2) = 7.0e-50
Identities = 82/228 (35%), Positives = 129/228 (56%)
Query: 39 EFESELPNKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIP 98
++E L ++ + E R+ LPI E+L A++ PV+ I G TG GKTTQI
Sbjct: 359 DYERSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKTTQIA 418
Query: 99 QYL---Y--------------EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDC-TSD 140
QY+ Y +PR ++A+SVA RV++E +LG VGYS+RFE
Sbjct: 419 QYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESVFPRP 478
Query: 141 KTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLL 200
+ + T +LLR++ E L S +IVDE ER +++D L +L+D+++ PDL ++
Sbjct: 479 YGAILFCTVGVLLRKL--EAGLRGVSHIIVDEIHERDVNSDFLLVILRDMVDTYPDLHVI 536
Query: 201 ISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFYTK--APEVDYIEAA 246
+ SAT+D KFS YFG P+ ++PGR +PV+ F+ + D++ +A
Sbjct: 537 LMSATIDTTKFSKYFGICPVLEVPGRAFPVQQFFLEDIIQMTDFVPSA 584
Score = 271 (100.5 bits), Expect = 7.0e-50, Sum P(2) = 7.0e-50
Identities = 90/332 (27%), Positives = 150/332 (45%)
Query: 247 IVTALQIHVNEPT--GDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPT 304
++ AL +H+ G ILVFL G + I + L Q T G ++ I P ++ +P
Sbjct: 639 LLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFL-QNTNIFGDT-SQYQILPCHSQIPR 696
Query: 305 ELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNP 364
+ Q K+FEP PE K++L+TNIAETS+TID I +VI A++K + + S
Sbjct: 697 DEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVW 756
Query: 365 ISKASANQRTGLSERTGPGKCFRLYTLHNYHRIWMTILCQKYNE------LIWKMLSLFS 418
SK + QR G + R PG CF L + + + + + + L K+L L S
Sbjct: 757 ASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALEDNLTPEMFRTPLHEMALTIKLLRLGS 816
Query: 419 NVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLD 478
++PP L+ +LT +GR +A PI+P+L K +V
Sbjct: 817 IHHFLSKALEPPPVDAVIEAEVLLREMRCLDANDELTPLGRLLARLPIEPRLGKMMVLGA 876
Query: 479 KYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWREC 538
+ C+D + +A+ + +F ++ A++ + D +A++ WR
Sbjct: 877 VFGCADLMAIMASYSSTFSEVFSLDIGQRRLANHQKA-LSGTKCSDHVAMIVASQMWRRE 935
Query: 539 NYSTE-----WCRENYIQVSSMKRARDIRDQL 565
E +C +Q+S+M D + QL
Sbjct: 936 KQRGEHMEARFCDWKGLQMSTMNVIWDAKQQL 967
>DICTYBASE|DDB_G0287351 [details] [associations]
symbol:dhx37 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0287351
GO:GO:0005524 GO:GO:0005730 GenomeReviews:CM000154_GR GO:GO:0003676
GO:GO:0042254 EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0003724 KO:K14780 GO:GO:0005732
RefSeq:XP_637255.1 STRING:Q54KG8 EnsemblProtists:DDB0235265
GeneID:8626085 KEGG:ddi:DDB_G0287351 InParanoid:Q54KG8 OMA:HERNLNT
Uniprot:Q54KG8
Length = 1461
Score = 332 (121.9 bits), Expect = 1.1e-49, Sum P(4) = 1.1e-49
Identities = 78/209 (37%), Positives = 115/209 (55%)
Query: 293 LIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYN 352
L + P+Y+ LPT Q ++F+ P +R VV+ATN+AETSLTI IKYV+ G K + YN
Sbjct: 846 LFVLPLYSTLPTSKQMRVFQTPPLGSRLVVVATNLAETSLTIPNIKYVVDTGRVKQRYYN 905
Query: 353 PKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYT--LHNYHRIWMT---ILCQKYN 407
G+ S V SKASA+QR G + RTGPG C+R+Y+ + N H + IL +
Sbjct: 906 KDNGISSFEVGWTSKASADQRAGRAGRTGPGHCYRIYSSAVFNDHFQQFSKPEILMIPID 965
Query: 408 ELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALN-KAGQLTRVGRQMAEFPI 466
+I +M S+ + F F PP GAL K +T +G +M++FP+
Sbjct: 966 GMILQMKSMGIQKITGFPFPTPPDESSLKLALRTLINLGALEVKTFSITELGMKMSQFPV 1025
Query: 467 DPKLSKTIVSLDKYKCSDEIITIAAMLFV 495
P+ SK ++ ++ C II I ++L V
Sbjct: 1026 SPRHSKMLLLGQEHNCLPYIIAIVSILTV 1054
Score = 206 (77.6 bits), Expect = 1.1e-49, Sum P(4) = 1.1e-49
Identities = 46/99 (46%), Positives = 66/99 (66%)
Query: 103 EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTV--LKYMTDCMLLREIVIEP 160
+PR VAA+S A RV++E+ V+ G EVGY IR+ D D +V +K+MTD +L+RE+ +
Sbjct: 463 QPRRVAAVSTAKRVAEELNVEFGKEVGYQIRY-DKKLDSSVNKIKFMTDGILMREVQTDF 521
Query: 161 SLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKL 199
L YS +++DEA ER L+TD L GLL ++ R L L
Sbjct: 522 LLSQYSSILIDEAHERNLNTDILIGLLSRIVPLRKKLYL 560
Score = 155 (59.6 bits), Expect = 2.1e-44, Sum P(4) = 2.1e-44
Identities = 41/104 (39%), Positives = 63/104 (60%)
Query: 176 RTLSTDNLFGLLK-DLINYRPDLKLLISSATLDAEKFSD----YFGSAPIFKIPGRRYPV 230
++L+T+ G + D+I Y P LKL++ SATL E F+ + P+ IP R++PV
Sbjct: 561 KSLATNKANGTIGVDMI-Y-P-LKLVVMSATLRVEDFTKNKTLFSRPPPVINIPTRQFPV 617
Query: 231 ELFYTKAPE-VDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIE 273
+ + K E V+YI+ ++IH N P+G ILVF+TG+ EIE
Sbjct: 618 TIHFNKKTELVNYIDECYKKVVKIHKNLPSGGILVFVTGKQEIE 661
Score = 105 (42.0 bits), Expect = 1.1e-49, Sum P(4) = 1.1e-49
Identities = 21/43 (48%), Positives = 28/43 (65%)
Query: 61 RKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE 103
R LPI +++ + V+ I GETGSGKTTQ+PQ+LYE
Sbjct: 402 RDNLPIMLEEHSIVEKIKDNDVVIICGETGSGKTTQVPQFLYE 444
Score = 44 (20.5 bits), Expect = 1.1e-49, Sum P(4) = 1.1e-49
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 544 WCRENYIQVSSMKRARDIRDQL 565
+C +N++ SM +R QL
Sbjct: 1144 FCSQNFLNTKSMSEIHKLRHQL 1165
Score = 43 (20.2 bits), Expect = 4.5e-26, Sum P(3) = 4.5e-26
Identities = 14/60 (23%), Positives = 31/60 (51%)
Query: 8 EKQQREKCTFEIEDKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTLPIY 67
E+++ E+ E E+++ + +E+ + +N DE E E+ + ++ E LP+Y
Sbjct: 795 EEEEVEEEEVEEEEEVDE--NENNNNNNNEDEDEFEIGKEDIITEDDEKPAGPLFVLPLY 852
>TAIR|locus:2052841 [details] [associations]
symbol:HVT1 "helicase in vascular tissue and tapetum"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] InterPro:IPR001374
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00393 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 IPI:IPI00521007
RefSeq:NP_850154.2 UniGene:At.19969 ProteinModelPortal:F4INY4
SMR:F4INY4 PRIDE:F4INY4 EnsemblPlants:AT2G30800.1 GeneID:817631
KEGG:ath:AT2G30800 OMA:PYNNVST Uniprot:F4INY4
Length = 1299
Score = 336 (123.3 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 100/348 (28%), Positives = 162/348 (46%)
Query: 241 DYIEAAIVTALQIHV--NEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPI 298
+ ++ +++ L + + G ILVFL G D+I + + L + + + IIC +
Sbjct: 531 EQVDVSLIQQLMRKICGDSEDGAILVFLPGWDDINKTRQRLLENPFFADSAKFD-IIC-L 588
Query: 299 YANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGME 358
++ +P Q K+F P RK+VLATNIAE+++TID + YVI G K KSY+P +
Sbjct: 589 HSMVPAGEQKKVFNRPPPGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVS 648
Query: 359 SLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRI----WMTILCQKYNELIWKML 414
+L + +SKA+A QR G + R PG C+ LY+ + I EL ++
Sbjct: 649 TLQSSWVSKANAKQRQGRAGRCQPGICYHLYSRLRAASMPDFKVPEIKRMPVEELCLQVK 708
Query: 415 SLFSNVLVNFDFI----DPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKL 470
L N N DF+ DPP GAL +LT +G + P+ P +
Sbjct: 709 ILDPNCKTN-DFLQKLLDPPVDQSIANALSILQDIGALTPQEELTELGEKFGHLPVHPLI 767
Query: 471 SKTIVSLDKYKCSDEIITIAAMLFVGN--SIFYRPKDKQIYADNARMNFH--LGDVGDRI 526
SK + C D +T+A ++ P ++Q A A++ G D +
Sbjct: 768 SKMLFFAVLVNCLDPALTLACAADYKEPFTMPMSPVERQ-KAAAAKLELASLCGGDSDHL 826
Query: 527 ALLRVYNCWRECN---YSTEWCRENYIQVSSMKRARDIRDQLEGLFAR 571
A++ + CW+ S E+C + ++ S+MK +R QLE R
Sbjct: 827 AVVAAFECWKNAKGRGLSAEFCSQYFVSPSAMKMLDQMRSQLESELKR 874
Score = 262 (97.3 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 61/180 (33%), Positives = 102/180 (56%)
Query: 103 EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
+PR ++AMSV+ R+S E G +G +GY +R + + + + T+ +LLR +V + S+
Sbjct: 242 QPRRISAMSVSERISCERGESIGENIGYKVRLQSKGGRHSSVVFCTNGILLRVLVGKGSV 301
Query: 163 ESYSVL---IVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAP 219
S S + IVDE ER +D + +++DL+ P L+L++ SATLDAE+FS YFG P
Sbjct: 302 SSVSDITHIIVDEIHERDCYSDFMLAIIRDLLPSNPHLRLILMSATLDAERFSGYFGGCP 361
Query: 220 IFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEIL 279
+ ++PG YPV Y + + +++ L N D + LT +D++ E I+
Sbjct: 362 VVRVPGFTYPVRTLYLE-DVLSILKSGGDNHLS-STNLSISDHKLDLTDEDKLALDEAII 419
Score = 184 (69.8 bits), Expect = 2.6e-41, Sum P(2) = 2.6e-41
Identities = 50/158 (31%), Positives = 79/158 (50%)
Query: 25 DFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLA 84
DFF + + E + L ++ L+ + + R LPI F + + AV V+
Sbjct: 148 DFFRKPQISSEEILEKVASLSSRLKKDKALKEITKLRSKLPITSFKDAITSAVESNQVIL 207
Query: 85 IVGETGSGKTTQIPQYLYE----------------PRWVAAMSVAARVSQEMGVKLGHEV 128
I GETG GKTTQ+PQYL + PR ++AMSV+ R+S E G +G +
Sbjct: 208 ISGETGCGKTTQVPQYLLDHMWSSKRETCKIVCTQPRRISAMSVSERISCERGESIGENI 267
Query: 129 GYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYS 166
GY +R + + + + T+ +LLR +V + S+ S S
Sbjct: 268 GYKVRLQSKGGRHSSVVFCTNGILLRVLVGKGSVSSVS 305
>UNIPROTKB|G4MZR9 [details] [associations]
symbol:MGG_07059 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 Gene3D:3.10.110.10
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 SUPFAM:SSF46934 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003715240.1
ProteinModelPortal:G4MZR9 EnsemblFungi:MGG_07059T0 GeneID:2682944
KEGG:mgr:MGG_07059 Uniprot:G4MZR9
Length = 1404
Score = 322 (118.4 bits), Expect = 2.3e-49, Sum P(3) = 2.3e-49
Identities = 93/290 (32%), Positives = 144/290 (49%)
Query: 252 QIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIF 311
++ + + +G IL+FL G EI RA +L R L L + P++A+L T+ Q K+F
Sbjct: 880 ELSLAQKSGGILIFLPGVAEINRACGML----RSLNC----LHVLPLHASLETKEQRKVF 931
Query: 312 EPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASAN 371
P P RKVV+ATN+AETS+TID I V+ G K SY+ M L S A+
Sbjct: 932 VPPPSGKRKVVVATNVAETSITIDDIIVVVDTGKVKETSYDAANNMRRLEETFASLAACK 991
Query: 372 QRTGLSERTGPGKCFRLYTLHNYHRIWMTILCQKYNELIWKM-LSLFSNVLVNF-DFI-- 427
QR G + R G+C++LYT ++ + + ++ LS+ + + + F+
Sbjct: 992 QRRGRAGRVQAGECYKLYTRKLESQMAERPEPEMRRVPLEQLCLSVRAMGIADVRGFLAR 1051
Query: 428 --DPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDE 485
PP G L+ +LT +GRQ+A P D + K +V + C ++
Sbjct: 1052 APTPPEAAAVEGAITMLRRMGCLD-GEELTALGRQLAAIPADLRCGKLMVYGAVFGCLED 1110
Query: 486 IITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCW 535
+++AA+L G +F P DK+ A AR F GD GD + LR + W
Sbjct: 1111 CVSVAALLSSGRGVFVSPPDKRDQAREARARFAAGD-GDLLTDLRAFQAW 1159
Score = 228 (85.3 bits), Expect = 2.3e-49, Sum P(3) = 2.3e-49
Identities = 55/144 (38%), Positives = 84/144 (58%)
Query: 103 EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIE--- 159
+PR ++A+ +A RVS E ++G EVGY IR E T KT + ++T +LLR + +
Sbjct: 689 QPRRISALGLADRVSDERCSQVGQEVGYIIRGESRTGPKTRITFVTTGVLLRRLQVSGGR 748
Query: 160 -----PSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDY 214
SL S +++DE ER+L TD L +++D++ R DLKL++ SATLD+ F+ Y
Sbjct: 749 VEDVVASLADVSHVVIDEVHERSLDTDFLLSIIRDVLKQRRDLKLVLMSATLDSATFASY 808
Query: 215 FGSAPI----FKIPGRRYPVELFY 234
F I +I GR +PV +Y
Sbjct: 809 FVQDGIRVGQVEIAGRTFPVTDYY 832
Score = 94 (38.1 bits), Expect = 2.3e-49, Sum P(3) = 2.3e-49
Identities = 19/57 (33%), Positives = 35/57 (61%)
Query: 60 ERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYEPRWVAAMSVAARV 116
+R+ LP + +E+++ V+ + V I GETGSGK+TQ Q++ + + + AA +
Sbjct: 629 QRQKLPAWLLRDEIVRTVAEHQVTIIAGETGSGKSTQSVQFILDDLYGRGLGHAANI 685
>UNIPROTKB|J3KSW6 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002464
InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 Ensembl:ENST00000580030 Uniprot:J3KSW6
Length = 268
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 117/244 (47%), Positives = 157/244 (64%)
Query: 59 EERKTLPIYPFWEE---LLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------------ 103
+E T P +P ++ ++QAV L + G TGSGKTTQ+P+YLYE
Sbjct: 25 QEGGTTPTFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVT 84
Query: 104 -PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
PR VAA+SVA RV++EM LG +VGY +RF+DC+S +T +KYMTD LL+ I+ +P+L
Sbjct: 85 QPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNL 144
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLI-----NYRPDLKLLISSATLDAEKFSDYFGS 217
+SV+I+DEA ERTL+TD LFGLLK L N + LK+++ SAT++ K S +FG+
Sbjct: 145 TKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGN 204
Query: 218 APIFKIPGRRYPV-ELFYTKAPEVD-----YIEAAIVTALQIHVNEPTGDILVFLTGQDE 271
PIF IPGR YPV E F D YI+A + + IH+NE GDILVFLTGQ E
Sbjct: 205 CPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFE 264
Query: 272 IERA 275
IE++
Sbjct: 265 IEKS 268
>UNIPROTKB|I3LHZ6 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:DDWIRLQ
Ensembl:ENSSSCT00000025297 Uniprot:I3LHZ6
Length = 1274
Score = 321 (118.1 bits), Expect = 7.5e-49, Sum P(2) = 7.5e-49
Identities = 74/214 (34%), Positives = 124/214 (57%)
Query: 39 EFESELPNKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIP 98
E ++EL + L+ + +ER+ LP+ F E+L+A+S PV+ + G TG GKTTQ+P
Sbjct: 359 EIKNELMYQLEQDRDLQAILQERELLPVKKFESEILEAISQNPVVIVRGATGCGKTTQVP 418
Query: 99 QYLYE-----------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTS-D 140
Q++ + PR ++A+SVA RV+ E G + G GYS+RFE
Sbjct: 419 QFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRP 478
Query: 141 KTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLL 200
+ + T +LLR++ E + S +IVDE ER ++TD L +L+D++ P+++++
Sbjct: 479 HASIMFCTVGVLLRKL--EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIV 536
Query: 201 ISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFY 234
+ SAT+D F +YF + PI ++ GR YPV+ ++
Sbjct: 537 LMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYF 570
Score = 272 (100.8 bits), Expect = 7.5e-49, Sum P(2) = 7.5e-49
Identities = 88/323 (27%), Positives = 146/323 (45%)
Query: 255 VNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPT 314
+N P G +LVFL G + I ++ L+ G +++ P+++ +P E Q K+F+P
Sbjct: 639 LNVP-GAVLVFLPGWNLIYTMQKHLEMNPH-FGNHRYQIL--PLHSQIPREEQRKVFDPV 694
Query: 315 PERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRT 374
P KV+L+TNIAETS+TI+ + YVI KVK + M + SK + QR
Sbjct: 695 PAGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRK 754
Query: 375 GLSERTGPGKCFRLYTLHNYHRI--WMT--ILCQKYNELIWKMLSLFSNVLVNF--DFID 428
G + R PG CF L + + R+ MT + +E+ + L + F I+
Sbjct: 755 GRAGRVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIE 814
Query: 429 PPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIIT 488
PP AL+ +LT +GR +A+ PI+P+ K ++ + D I T
Sbjct: 815 PPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICT 874
Query: 489 IAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTE----- 543
I+A K + Y NF D +ALL V+ W + E
Sbjct: 875 ISAATCFPEPFISEGK-RLGYIHR---NFAGNRFSDHVALLSVFQAWDDARMGGEEAEIR 930
Query: 544 WCRENYIQVSSMKRARDIRDQLE 566
+C + +++++ + + QL+
Sbjct: 931 FCEHKRLNMATLRMTWEAKVQLK 953
Score = 37 (18.1 bits), Expect = 3.3e-24, Sum P(2) = 3.3e-24
Identities = 12/59 (20%), Positives = 23/59 (38%)
Query: 464 FPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDV 522
FP D L++ + D +I++ A N +++ K K + + H V
Sbjct: 961 FPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEGRNALIHKSSV 1019
>ZFIN|ZDB-GENE-070912-171 [details] [associations]
symbol:dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide
9" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 ZFIN:ZDB-GENE-070912-171
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 HOVERGEN:HBG039429 OrthoDB:EOG4HHP1J
OMA:DDWIRLQ EMBL:BX571812 IPI:IPI00491874 UniGene:Dr.79297
SMR:B0S6Z1 Ensembl:ENSDART00000111661 Ensembl:ENSDART00000134918
Uniprot:B0S6Z1
Length = 1271
Score = 309 (113.8 bits), Expect = 1.3e-48, Sum P(2) = 1.3e-48
Identities = 70/199 (35%), Positives = 114/199 (57%)
Query: 54 LEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE---------- 103
L+ + ER LP+ F E+++ + PV+ I G TG GKTTQ+PQY+ +
Sbjct: 385 LQTILTERSQLPVKNFQEQIMSTIYNNPVVIIRGATGCGKTTQVPQYILDEFIKGGRASD 444
Query: 104 -------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFED-CTSDKTVLKYMTDCMLLRE 155
PR ++A+SVA RVS E G +G GYS+RFE + + T +LLR+
Sbjct: 445 CNIVVTQPRRISAVSVAERVSFERGEDVGKSCGYSVRFESFLPRPHASILFCTVGVLLRK 504
Query: 156 IVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYF 215
+ E + S +IVDE ER ++TD L +L+D++ PD+++++ SAT+D F +YF
Sbjct: 505 L--ESGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPDVRVILMSATIDTTMFKEYF 562
Query: 216 GSAPIFKIPGRRYPVELFY 234
+ P+ ++ GR +PV+ ++
Sbjct: 563 FNCPVIEVHGRAHPVQEYF 581
Score = 283 (104.7 bits), Expect = 1.3e-48, Sum P(2) = 1.3e-48
Identities = 93/348 (26%), Positives = 152/348 (43%)
Query: 236 KAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELII 295
K + IEA + I E G +LVFL G + I ++ L+ G + I
Sbjct: 636 KETSFELIEALLK---YIETLEVPGAVLVFLPGWNLIYFMQKHLEMNPHFGGHQYR---I 689
Query: 296 CPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKT 355
P+++ +P E Q ++FEP P+ KV+L+TNIAETS+TI+ + +V+ KVK +
Sbjct: 690 LPLHSQIPREEQRRVFEPVPDGVTKVILSTNIAETSITINDVVFVLDSCKQKVKLFTSHN 749
Query: 356 GMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRI--WMT--ILCQKYNELIW 411
M + SK + QR G + R PG CF L + + ++ MT I +E+
Sbjct: 750 NMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFEKLETHMTPEIFRTPLHEVAL 809
Query: 412 KMLSLFSNVLVNF--DFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPK 469
+ L + NF I+PP AL+ +LT +GR +A+ PI+P+
Sbjct: 810 SIKLLRLGGIGNFLSKAIEPPPLDAVIEAEHTLRELDALDSNDELTPLGRILAKLPIEPR 869
Query: 470 LSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALL 529
L K ++ + D + TI+A K NF D +ALL
Sbjct: 870 LGKMMIMGCIFNVGDAVCTISAATCFPEPFINEGKRLGF----VHRNFAGSRFSDHVALL 925
Query: 530 RVYNCWRECNYSTE-----WCRENYIQVSSMKRARDIRDQLEGLFARV 572
V+ W E E +C + + +++ + + QL+ + V
Sbjct: 926 SVFQAWDEVRVGGEDAEIRFCEHKRLNMPTLRMTWEAKVQLKEILVNV 973
>UNIPROTKB|Q68FK8 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase A-like protein"
species:8355 "Xenopus laevis" [GO:0070937 "CRD-mediated mRNA
stability complex" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:1660
HOVERGEN:HBG039429 KO:K13184 GO:GO:0070937 EMBL:BC079701
RefSeq:NP_001087383.1 UniGene:Xl.55621 ProteinModelPortal:Q68FK8
SMR:Q68FK8 PRIDE:Q68FK8 GeneID:447207 KEGG:xla:447207
Xenbase:XB-GENE-967780 Uniprot:Q68FK8
Length = 1262
Score = 316 (116.3 bits), Expect = 1.3e-48, Sum P(2) = 1.3e-48
Identities = 73/193 (37%), Positives = 116/193 (60%)
Query: 60 ERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYL---Y-------------- 102
+R++LP+ F EE++ AV PV+ I G TG GKTTQ+PQY+ Y
Sbjct: 386 DRESLPVKKFEEEIMHAVHNSPVVIIRGATGCGKTTQVPQYILDEYIRNDRAAQCNIVVT 445
Query: 103 EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTS-DKTVLKYMTDCMLLREIVIEPS 161
+PR ++A+SVA RV+ E G ++G GYS+RFE + + T +LLR++ E
Sbjct: 446 QPRRISAVSVAERVAFERGEEIGKSCGYSVRFESVLPRPHASMLFCTVGVLLRKL--ESG 503
Query: 162 LESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIF 221
+ S +IVDE ER ++TD L +L+D+I P++++++ SAT+D F +YF + PI
Sbjct: 504 IRGISHVIVDEIHERDINTDFLLVVLRDVIQAFPEIRVILMSATIDTSMFCEYFFNCPII 563
Query: 222 KIPGRRYPVELFY 234
++ GR +PV+ +Y
Sbjct: 564 EVFGRTFPVQEYY 576
Score = 275 (101.9 bits), Expect = 1.3e-48, Sum P(2) = 1.3e-48
Identities = 94/354 (26%), Positives = 164/354 (46%)
Query: 226 RRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRG 285
RR +L + P ++ IEA ++ ++ +N P G +LVFL G + I ++ L+
Sbjct: 623 RRSMSQLSEKETP-LELIEA-LLKYIET-LNVP-GAVLVFLPGWNLIYAMQKHLEMNPH- 677
Query: 286 LGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGF 345
G+ I P+++ +P + Q K+F+P P+ KV+L+TNIAETS+TI+ + YVI
Sbjct: 678 FGSH--SYCILPLHSQIPRDEQRKVFDPVPDGIIKVILSTNIAETSITINDVVYVIDSCK 735
Query: 346 AKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRI--WMT--I 401
KVK + M + SK + QR G + R PG CF L + + ++ +T I
Sbjct: 736 QKVKLFTSHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSKARFDKLETHLTPEI 795
Query: 402 LCQKYNELIWKMLSLFSNVLVNF--DFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGR 459
+E+ + L + +F I+PP AL+ +LT +GR
Sbjct: 796 FRTPLHEVALSIKLLRLGGIGHFLSKAIEPPPLDAVIEAEHTLRELDALDSNDELTPLGR 855
Query: 460 QMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHL 519
+A+ PI+P+L K ++ + D + TI+A F + Y NF
Sbjct: 856 ILAKLPIEPRLGKMMIIGCIFYVGDALCTISAATCFPEP-FISEGRRLGYVHR---NFAG 911
Query: 520 GDVGDRIALLRVYNCWRECNYS-----TEWCRENYIQVSSMKRARDIRDQLEGL 568
D +ALL V+ W + T +C + +++++ + + QL+ +
Sbjct: 912 NRFSDHVALLSVFQAWDDARMGGEDAETRFCEHKRLNMATLRMTWEAKVQLKDI 965
>UNIPROTKB|G5E5N3 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 UniGene:Bt.5544 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:DAAA02043563 EMBL:DAAA02043564
Ensembl:ENSBTAT00000026409 Uniprot:G5E5N3
Length = 1287
Score = 314 (115.6 bits), Expect = 1.5e-48, Sum P(2) = 1.5e-48
Identities = 73/214 (34%), Positives = 124/214 (57%)
Query: 39 EFESELPNKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIP 98
+ ++EL + L+ + +ER+ LP+ F E+L+A+S PV+ I G TG GKTTQ+P
Sbjct: 360 DLKNELMYQLEQDRDLQAVLQERELLPVKKFESEILEAISQNPVVIIRGATGCGKTTQVP 419
Query: 99 QYLYE-----------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTS-D 140
Q++ + PR ++A+SVA RV+ E G + G GYS+RFE
Sbjct: 420 QFILDDCIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRP 479
Query: 141 KTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLL 200
+ + T +LLR++ E + S +IVDE ER ++TD L +L+D++ P+++++
Sbjct: 480 HASIMFCTVGVLLRKL--EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIV 537
Query: 201 ISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFY 234
+ SAT+D F +YF + PI ++ GR +PV+ ++
Sbjct: 538 LMSATIDTSMFCEYFFNCPIIEVYGRTFPVQEYF 571
Score = 277 (102.6 bits), Expect = 1.5e-48, Sum P(2) = 1.5e-48
Identities = 89/334 (26%), Positives = 153/334 (45%)
Query: 247 IVTALQIHV---NEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLP 303
++ AL +++ N P G +LVFL G + I ++ L+ G+ +++ P+++ +P
Sbjct: 633 LIEALLLYIETLNVP-GAVLVFLPGWNLIYTMQKHLEMNPH-FGSHRYQIL--PLHSQIP 688
Query: 304 TELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVN 363
E Q K+F+P P K++L+TNIAETS+TI+ + YVI KVK + M +
Sbjct: 689 REEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATV 748
Query: 364 PISKASANQRTGLSERTGPGKCFRLYTLHNYHRI--WMT--ILCQKYNELIWKMLSLFSN 419
SK + QR G + R PG CF L + + R+ MT + +E+ + L
Sbjct: 749 WASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKLLRLG 808
Query: 420 VLVNF--DFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSL 477
+ F I+PP AL+ +LT +GR +A+ PI+P+ K ++
Sbjct: 809 GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMG 868
Query: 478 DKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRE 537
+ D I TI+A K + Y NF D +ALL V+ W +
Sbjct: 869 CIFYVGDAICTISAATCFPEPFISEGK-RLGYIHR---NFAGNRFSDHVALLSVFQAWDD 924
Query: 538 CNYSTE-----WCRENYIQVSSMKRARDIRDQLE 566
E +C + +++++ + + QL+
Sbjct: 925 ARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLK 958
>UNIPROTKB|Q28141 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247063 EMBL:X82829 IPI:IPI00714708
PIR:I46032 RefSeq:NP_776461.1 UniGene:Bt.5544
ProteinModelPortal:Q28141 SMR:Q28141 STRING:Q28141 PRIDE:Q28141
GeneID:281115 KEGG:bta:281115 CTD:1660 HOVERGEN:HBG039429
InParanoid:Q28141 KO:K13184 OrthoDB:EOG4HHP1J NextBio:20805185
GO:GO:0070937 Uniprot:Q28141
Length = 1287
Score = 314 (115.6 bits), Expect = 1.5e-48, Sum P(2) = 1.5e-48
Identities = 73/214 (34%), Positives = 124/214 (57%)
Query: 39 EFESELPNKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIP 98
+ ++EL + L+ + +ER+ LP+ F E+L+A+S PV+ I G TG GKTTQ+P
Sbjct: 360 DLKNELMYQLEQDRDLQAVLQERELLPVKKFESEILEAISQNPVVIIRGATGCGKTTQVP 419
Query: 99 QYLYE-----------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTS-D 140
Q++ + PR ++A+SVA RV+ E G + G GYS+RFE
Sbjct: 420 QFILDDCIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRP 479
Query: 141 KTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLL 200
+ + T +LLR++ E + S +IVDE ER ++TD L +L+D++ P+++++
Sbjct: 480 HASIMFCTVGVLLRKL--EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIV 537
Query: 201 ISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFY 234
+ SAT+D F +YF + PI ++ GR +PV+ ++
Sbjct: 538 LMSATIDTSMFCEYFFNCPIIEVYGRTFPVQEYF 571
Score = 277 (102.6 bits), Expect = 1.5e-48, Sum P(2) = 1.5e-48
Identities = 89/334 (26%), Positives = 153/334 (45%)
Query: 247 IVTALQIHV---NEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLP 303
++ AL +++ N P G +LVFL G + I ++ L+ G+ +++ P+++ +P
Sbjct: 633 LIEALLLYIETLNVP-GAVLVFLPGWNLIYTMQKHLEMNPH-FGSHRYQIL--PLHSQIP 688
Query: 304 TELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVN 363
E Q K+F+P P K++L+TNIAETS+TI+ + YVI KVK + M +
Sbjct: 689 REEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATV 748
Query: 364 PISKASANQRTGLSERTGPGKCFRLYTLHNYHRI--WMT--ILCQKYNELIWKMLSLFSN 419
SK + QR G + R PG CF L + + R+ MT + +E+ + L
Sbjct: 749 WASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKLLRLG 808
Query: 420 VLVNF--DFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSL 477
+ F I+PP AL+ +LT +GR +A+ PI+P+ K ++
Sbjct: 809 GIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMG 868
Query: 478 DKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRE 537
+ D I TI+A K + Y NF D +ALL V+ W +
Sbjct: 869 CIFYVGDAICTISAATCFPEPFISEGK-RLGYIHR---NFAGNRFSDHVALLSVFQAWDD 924
Query: 538 CNYSTE-----WCRENYIQVSSMKRARDIRDQLE 566
E +C + +++++ + + QL+
Sbjct: 925 ARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLK 958
>TAIR|locus:2196255 [details] [associations]
symbol:AT1G58050 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC079604
IPI:IPI00531251 PIR:F96613 RefSeq:NP_176102.1 UniGene:At.52250
ProteinModelPortal:Q9C6G0 SMR:Q9C6G0 PaxDb:Q9C6G0 PRIDE:Q9C6G0
EnsemblPlants:AT1G58050.1 GeneID:842172 KEGG:ath:AT1G58050
TAIR:At1g58050 HOGENOM:HOG000240812 InParanoid:Q9C6G0 OMA:ISPENED
PhylomeDB:Q9C6G0 ProtClustDB:CLSN2679369 Genevestigator:Q9C6G0
Uniprot:Q9C6G0
Length = 1417
Score = 313 (115.2 bits), Expect = 2.4e-48, Sum P(4) = 2.4e-48
Identities = 92/287 (32%), Positives = 138/287 (48%)
Query: 235 TKAPEVDYIEAAIVT-----ALQIHVNEPT--GDILVFLTGQDEIERAEEILKQRTRGLG 287
T + YI +A+V L H+++ G ILVFL G EI L R G
Sbjct: 851 TSYDSIKYIASAVVDYDLLEELICHIDDTCEEGAILVFLPGMSEINMLLNRLAASYRFRG 910
Query: 288 TKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAK 347
L+ P+++++ + Q K+F P+ RKV++ATNIAETS+TI+ + YVI G K
Sbjct: 911 ASGDWLL--PLHSSIASTEQKKVFLRPPKGIRKVIIATNIAETSITIEDVVYVIDSGKHK 968
Query: 348 VKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIWMT-----IL 402
YNP + S++ + +SKA+A QR G + R PG CF LYT H + ++ +L
Sbjct: 969 ENRYNPHKKLSSMVEDWVSKANARQRMGRAGRVKPGHCFSLYTRHRFEKLMRPYQVPEML 1028
Query: 403 CQKYNELIW--KMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQ 460
EL K+L L ++PP GAL +LT +G
Sbjct: 1029 RVPLVELCLHIKLLGLGQIKPFLSKALEPPSESAINSAILLLHKVGALEGDEELTPLGHH 1088
Query: 461 MAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQ 507
+A+ P+D + K ++ + C I++IAA L S F KD+Q
Sbjct: 1089 LAKLPVDLLIGKMLLYGGIFGCLSPILSIAAFLSCCKSPFVYAKDEQ 1135
Score = 212 (79.7 bits), Expect = 2.4e-48, Sum P(4) = 2.4e-48
Identities = 56/142 (39%), Positives = 83/142 (58%)
Query: 103 EPRWVAAMSVAARVSQEM-GVKLGHE---VGYSIRFEDCTSDKTVLKYMTDCMLLREIVI 158
+PR A++VA RV+ E G + V Y +R ++ SDKT L + T +LLR++V
Sbjct: 653 QPR---AITVAQRVADERCEPPPGFDNSVVAYQVRHQNARSDKTRLLFCTTGILLRKLVG 709
Query: 159 EPSLESYSVLIVDEAQERTLSTDNLFGLLKDLI------NYRPDLKLLISSATLDAEKFS 212
+ +L+ + +IVDE ER+L D L +LK LI N P LK+++ SAT+DA +FS
Sbjct: 710 DTTLKDVTHIIVDEVHERSLMGDFLLIILKSLIEKQSWDNALPKLKVILMSATVDAHQFS 769
Query: 213 DYFGSAPIFKIPGRRYPVELFY 234
YFG PI GR +PV ++
Sbjct: 770 RYFGQCPIITAQGRTHPVTTYF 791
Score = 113 (44.8 bits), Expect = 2.4e-48, Sum P(4) = 2.4e-48
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 46 NKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE 103
NK ++ +ML+ R LPI +++LQ + VL + GETGSGKTTQ+PQ++ +
Sbjct: 580 NKKKMQKYKDMLKT-RAALPISEVKKDILQKLKEKDVLVVCGETGSGKTTQVPQFILD 636
Score = 39 (18.8 bits), Expect = 2.4e-48, Sum P(4) = 2.4e-48
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 7 WEKQQREKCTFEIEDKIVDFFSESVFDGDNF 37
W++++ T E++ + F ES+ + DNF
Sbjct: 497 WKQEESLGITSR-EEQRREKFVESLLEADNF 526
>MGI|MGI:108177 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001085 "RNA polymerase II transcription factor
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0034605 "cellular response to heat"
evidence=IDA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=ISO] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISO] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 MGI:MGI:108177 GO:GO:0005524
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 GO:GO:0007623
Gene3D:3.30.160.20 GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063 CTD:1660
HOVERGEN:HBG039429 KO:K13184 OrthoDB:EOG4HHP1J GO:GO:0070937
EMBL:U91922 EMBL:AF023530 EMBL:AY512925 EMBL:BC089159 EMBL:AK013423
EMBL:U92080 IPI:IPI00339468 IPI:IPI00607914 IPI:IPI00875791
RefSeq:NP_031868.2 UniGene:Mm.20000 PDB:1UIL PDB:1WHQ PDB:2RS6
PDB:2RS7 PDBsum:1UIL PDBsum:1WHQ PDBsum:2RS6 PDBsum:2RS7
ProteinModelPortal:O70133 SMR:O70133 IntAct:O70133 STRING:O70133
PhosphoSite:O70133 PaxDb:O70133 PRIDE:O70133 GeneID:13211
KEGG:mmu:13211 UCSC:uc007czy.1 InParanoid:O70133 ChiTaRS:DHX9
EvolutionaryTrace:O70133 NextBio:283382 CleanEx:MM_DHX9
Genevestigator:O70133 GermOnline:ENSMUSG00000042699 Uniprot:O70133
Length = 1380
Score = 307 (113.1 bits), Expect = 2.7e-48, Sum P(2) = 2.7e-48
Identities = 72/214 (33%), Positives = 123/214 (57%)
Query: 39 EFESELPNKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIP 98
+ ++EL + L+ + +ER+ LP+ F E+L+A+S V+ I G TG GKTTQ+P
Sbjct: 365 DLKNELTYQMEQDHNLQSVLQERELLPVKKFEAEILEAISSNSVVIIRGATGCGKTTQVP 424
Query: 99 QYLYE-----------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTS-D 140
QY+ + PR ++A++VA RV+ E G + G GYS+RFE
Sbjct: 425 QYILDDFIQNDRAAECNIVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFESILPRP 484
Query: 141 KTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLL 200
+ + T +LLR++ E + S +IVDE ER ++TD L +L+D++ P+++++
Sbjct: 485 HASIMFCTVGVLLRKL--EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVLAYPEVRIV 542
Query: 201 ISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFY 234
+ SAT+D F +YF + PI ++ GR +PV+ ++
Sbjct: 543 LMSATIDTTMFCEYFFNCPIIEVYGRTFPVQEYF 576
Score = 283 (104.7 bits), Expect = 2.7e-48, Sum P(2) = 2.7e-48
Identities = 88/323 (27%), Positives = 151/323 (46%)
Query: 255 VNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPT 314
+N P G +LVFL G + I ++ L+ + G+ +++ P+++ +P E Q K+F+P
Sbjct: 649 LNVP-GAVLVFLPGWNLIYTMQKHLENNSH-FGSHRYQIL--PLHSQIPREEQRKVFDPV 704
Query: 315 PERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRT 374
P+ KV+L+TNIAETS+TI+ + YVI KVK + M + SK + QR
Sbjct: 705 PDGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRK 764
Query: 375 GLSERTGPGKCFRLYTLHNYHRI--WMT--ILCQKYNELIWKMLSLFSNVLVNF--DFID 428
G + R PG CF L + + R+ MT + +E+ + L + F I+
Sbjct: 765 GRAGRVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIE 824
Query: 429 PPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIIT 488
PP AL+ +LT +GR +A+ PI+P+ K ++ + D + T
Sbjct: 825 PPPLDAIIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAVCT 884
Query: 489 IAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTE----- 543
I+A K + Y NF D +ALL V+ W + S E
Sbjct: 885 ISAATCFPEPFISEGK-RLGYIHR---NFAGNRFSDHVALLSVFQAWDDARMSGEEAEIR 940
Query: 544 WCRENYIQVSSMKRARDIRDQLE 566
+C + + +++++ + + QL+
Sbjct: 941 FCEQKRLNMATLRMTWEAKVQLK 963
Score = 37 (18.1 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 12/59 (20%), Positives = 23/59 (38%)
Query: 464 FPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDV 522
FP D L++ + D +I++ A N +++ K K + + H V
Sbjct: 971 FPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEGRNALIHKSSV 1029
>RGD|1308548 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10116 "Rattus norvegicus" [GO:0001085 "RNA polymerase II
transcription factor binding" evidence=IEA;ISO] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0007623 "circadian rhythm" evidence=IEA;ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA;ISO]
[GO:0034605 "cellular response to heat" evidence=IEA;ISO]
[GO:0070934 "CRD-mediated mRNA stabilization" evidence=IEA;ISO]
[GO:0070937 "CRD-mediated mRNA stability complex" evidence=IEA;ISO]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 RGD:1308548 GO:GO:0005524 Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 OrthoDB:EOG4HHP1J
EMBL:CH473958 IPI:IPI00947663 RefSeq:NP_001100654.1
UniGene:Rn.107359 Ensembl:ENSRNOT00000064860 GeneID:304859
KEGG:rno:304859 UCSC:RGD:1308548 NextBio:653729 Uniprot:D4A9D6
Length = 1174
Score = 305 (112.4 bits), Expect = 2.8e-48, Sum P(2) = 2.8e-48
Identities = 72/214 (33%), Positives = 123/214 (57%)
Query: 39 EFESELPNKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIP 98
+ ++EL + L+ + +ER+ LP+ F E+L+A+S V+ I G TG GKTTQ+P
Sbjct: 366 DLKNELAYQMEQDHNLQSVLQERELLPVKKFEAEILEAISQNSVVIIRGATGCGKTTQVP 425
Query: 99 QYLYE-----------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTS-D 140
QY+ + PR ++A++VA RV+ E G + G GYS+RFE
Sbjct: 426 QYILDDFIQNDRAAECNIVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFESILPRP 485
Query: 141 KTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLL 200
+ + T +LLR++ E + S +IVDE ER ++TD L +L+D++ P+++++
Sbjct: 486 HASIMFCTVGVLLRKL--EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVLAYPEVRIV 543
Query: 201 ISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFY 234
+ SAT+D F +YF + PI ++ GR +PV+ ++
Sbjct: 544 LMSATIDTTMFCEYFFNCPIIEVYGRTFPVQEYF 577
Score = 283 (104.7 bits), Expect = 2.8e-48, Sum P(2) = 2.8e-48
Identities = 88/323 (27%), Positives = 151/323 (46%)
Query: 255 VNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPT 314
+N P G +LVFL G + I ++ L+ + G+ +++ P+++ +P E Q K+F+P
Sbjct: 650 LNVP-GAVLVFLPGWNLIYTMQKHLENNSH-FGSHRYQIL--PLHSQIPREEQRKVFDPV 705
Query: 315 PERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRT 374
P+ KV+L+TNIAETS+TI+ + YVI KVK + M + SK + QR
Sbjct: 706 PDGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRK 765
Query: 375 GLSERTGPGKCFRLYTLHNYHRI--WMT--ILCQKYNELIWKMLSLFSNVLVNF--DFID 428
G + R PG CF L + + R+ MT + +E+ + L + F I+
Sbjct: 766 GRAGRVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIE 825
Query: 429 PPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIIT 488
PP AL+ +LT +GR +A+ PI+P+ K ++ + D + T
Sbjct: 826 PPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAVCT 885
Query: 489 IAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTE----- 543
I+A K + Y NF D +ALL V+ W + S E
Sbjct: 886 ISAATCFPEPFISEGK-RLGYIHR---NFAGNRFSDHVALLSVFQAWDDARMSGEEAEIR 941
Query: 544 WCRENYIQVSSMKRARDIRDQLE 566
+C + + +++++ + + QL+
Sbjct: 942 FCEQKRLNMATLRMTWEAKVQLK 964
Score = 37 (18.1 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 12/59 (20%), Positives = 23/59 (38%)
Query: 464 FPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDV 522
FP D L++ + D +I++ A N +++ K K + + H V
Sbjct: 972 FPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEGRNALIHKSSV 1030
>UNIPROTKB|Q5R874 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9601
"Pongo abelii" [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ GO:GO:0070934
EMBL:CR859880 RefSeq:XP_002809755.1 UniGene:Pab.8432
ProteinModelPortal:Q5R874 SMR:Q5R874 PRIDE:Q5R874
Ensembl:ENSPPYT00000000510 GeneID:100449914 KEGG:pon:100449914
InParanoid:Q5R874 Uniprot:Q5R874
Length = 1269
Score = 309 (113.8 bits), Expect = 3.3e-48, Sum P(2) = 3.3e-48
Identities = 73/214 (34%), Positives = 123/214 (57%)
Query: 39 EFESELPNKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIP 98
+ ++EL + L+ + +ER+ LP+ F E+L+A+S V+ I G TG GKTTQ+P
Sbjct: 363 DLKNELMYQLEQDHDLQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVP 422
Query: 99 QYLYE-----------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTS-D 140
Q++ + PR ++A+SVA RV+ E G + G GYS+RFE
Sbjct: 423 QFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRP 482
Query: 141 KTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLL 200
+ + T +LLR++ E + S +IVDE ER ++TD L +L+D++ P+++++
Sbjct: 483 HASIMFCTVGVLLRKL--EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIV 540
Query: 201 ISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFY 234
+ SAT+D F +YF + PI ++ GR YPV+ ++
Sbjct: 541 LMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYF 574
Score = 279 (103.3 bits), Expect = 3.3e-48, Sum P(2) = 3.3e-48
Identities = 95/354 (26%), Positives = 159/354 (44%)
Query: 224 PGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRT 283
P R + K + IEA ++ ++ +N P G +LVFL G + I ++ L+
Sbjct: 618 PETRLSMSQLNEKETPFELIEA-LLKYIET-LNVP-GAVLVFLPGWNLIYTMQKHLEMNP 674
Query: 284 RGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHP 343
G+ +++ P+++ +P E Q K+F+P P KV+L+TNIAETS+TI+ + YVI
Sbjct: 675 H-FGSHRYQIL--PLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDS 731
Query: 344 GFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRI--WMT- 400
KVK + M + SK + QR G + R PG CF L + + R+ MT
Sbjct: 732 CKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTP 791
Query: 401 -ILCQKYNELIWKMLSLFSNVLVNF--DFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRV 457
+ +E+ + L + F I+PP AL+ +LT +
Sbjct: 792 EMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPL 851
Query: 458 GRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNF 517
GR +A+ PI+P+ K ++ + D I TIAA K + Y NF
Sbjct: 852 GRILAKLPIEPRFGKMMIMGCIFYVGDAICTIAAATCFPEPFINEGK-RLGYIHR---NF 907
Query: 518 HLGDVGDRIALLRVYNCWRECNYSTE-----WCRENYIQVSSMKRARDIRDQLE 566
D +ALL V+ W + E +C + +++++ + + QL+
Sbjct: 908 AGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLK 961
Score = 37 (18.1 bits), Expect = 7.8e-23, Sum P(2) = 7.8e-23
Identities = 12/59 (20%), Positives = 23/59 (38%)
Query: 464 FPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDV 522
FP D L++ + D +I++ A N +++ K K + + H V
Sbjct: 969 FPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEGRNALIHKSSV 1027
>UNIPROTKB|Q08211 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9606
"Homo sapiens" [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0070937 "CRD-mediated mRNA stability
complex" evidence=IDA] [GO:0070934 "CRD-mediated mRNA
stabilization" evidence=IMP] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=IPI] Reactome:REACT_71 InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005813 GO:GO:0005654 GO:GO:0034605
GO:GO:0005730 GO:GO:0003677 Reactome:REACT_1675 Gene3D:3.30.160.20
EMBL:CH471067 GO:GO:0030529 GO:GO:0003725 GO:GO:0004003
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000247063 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ EMBL:L13848 EMBL:U03643
EMBL:Y10658 EMBL:AB451248 EMBL:AB451372 EMBL:AL355999 EMBL:AL662837
EMBL:BC025245 EMBL:BC058896 EMBL:BC107881 EMBL:BC137136
IPI:IPI00844578 RefSeq:NP_001348.2 UniGene:Hs.191518 PDB:3LLM
PDBsum:3LLM ProteinModelPortal:Q08211 SMR:Q08211 DIP:DIP-31504N
IntAct:Q08211 MINT:MINT-5000572 STRING:Q08211 PhosphoSite:Q08211
DMDM:116241330 SWISS-2DPAGE:Q08211 PaxDb:Q08211 PRIDE:Q08211
Ensembl:ENST00000367549 GeneID:1660 KEGG:hsa:1660 UCSC:uc001gpr.3
GeneCards:GC01P182808 H-InvDB:HIX0001404 H-InvDB:HIX0149309
HGNC:HGNC:2750 HPA:CAB011819 HPA:HPA028050 MIM:603115
neXtProt:NX_Q08211 PharmGKB:PA27232 InParanoid:Q08211
GenomeRNAi:1660 NextBio:6832 PMAP-CutDB:Q08211 ArrayExpress:Q08211
Bgee:Q08211 CleanEx:HS_DHX9 Genevestigator:Q08211
GermOnline:ENSG00000135829 GO:GO:0070934 Uniprot:Q08211
Length = 1270
Score = 309 (113.8 bits), Expect = 3.3e-48, Sum P(2) = 3.3e-48
Identities = 73/214 (34%), Positives = 123/214 (57%)
Query: 39 EFESELPNKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIP 98
+ ++EL + L+ + +ER+ LP+ F E+L+A+S V+ I G TG GKTTQ+P
Sbjct: 363 DLKNELMYQLEQDHDLQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVP 422
Query: 99 QYLYE-----------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTS-D 140
Q++ + PR ++A+SVA RV+ E G + G GYS+RFE
Sbjct: 423 QFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRP 482
Query: 141 KTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLL 200
+ + T +LLR++ E + S +IVDE ER ++TD L +L+D++ P+++++
Sbjct: 483 HASIMFCTVGVLLRKL--EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIV 540
Query: 201 ISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFY 234
+ SAT+D F +YF + PI ++ GR YPV+ ++
Sbjct: 541 LMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYF 574
Score = 279 (103.3 bits), Expect = 3.3e-48, Sum P(2) = 3.3e-48
Identities = 95/354 (26%), Positives = 159/354 (44%)
Query: 224 PGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRT 283
P R + K + IEA ++ ++ +N P G +LVFL G + I ++ L+
Sbjct: 618 PETRLSMSQLNEKETPFELIEA-LLKYIET-LNVP-GAVLVFLPGWNLIYTMQKHLEMNP 674
Query: 284 RGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHP 343
G+ +++ P+++ +P E Q K+F+P P KV+L+TNIAETS+TI+ + YVI
Sbjct: 675 H-FGSHRYQIL--PLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDS 731
Query: 344 GFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRI--WMT- 400
KVK + M + SK + QR G + R PG CF L + + R+ MT
Sbjct: 732 CKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTP 791
Query: 401 -ILCQKYNELIWKMLSLFSNVLVNF--DFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRV 457
+ +E+ + L + F I+PP AL+ +LT +
Sbjct: 792 EMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPL 851
Query: 458 GRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNF 517
GR +A+ PI+P+ K ++ + D I TIAA K + Y NF
Sbjct: 852 GRILAKLPIEPRFGKMMIMGCIFYVGDAICTIAAATCFPEPFINEGK-RLGYIHR---NF 907
Query: 518 HLGDVGDRIALLRVYNCWRECNYSTE-----WCRENYIQVSSMKRARDIRDQLE 566
D +ALL V+ W + E +C + +++++ + + QL+
Sbjct: 908 AGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLK 961
Score = 37 (18.1 bits), Expect = 7.8e-23, Sum P(2) = 7.8e-23
Identities = 12/59 (20%), Positives = 23/59 (38%)
Query: 464 FPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDV 522
FP D L++ + D +I++ A N +++ K K + + H V
Sbjct: 969 FPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEGRNALIHKSSV 1027
>DICTYBASE|DDB_G0267516 [details] [associations]
symbol:dhx57 "RWD domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
dictyBase:DDB_G0267516 GO:GO:0005524 GenomeReviews:CM000150_GR
EMBL:AAFI02000003 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13026
RefSeq:XP_647095.1 ProteinModelPortal:Q55GT9
EnsemblProtists:DDB0235268 GeneID:8615899 KEGG:ddi:DDB_G0267516
OMA:EVHERST Uniprot:Q55GT9
Length = 1451
Score = 310 (114.2 bits), Expect = 1.8e-47, Sum P(3) = 1.8e-47
Identities = 103/355 (29%), Positives = 165/355 (46%)
Query: 236 KAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELII 295
K +D +E+ I+ + V + ILVF+ G +I L + I + I
Sbjct: 875 KRINLDVVESLILHLVN-GVLKKDKSILVFVPGLSDILELCSRLGKPISTFTEAICQRIW 933
Query: 296 C-PIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPK 354
C P++++L + Q K+FE P KVV+ATNIAETS+TI+ ++ V+ G ++N
Sbjct: 934 CVPLHSSLSPKDQQKVFEKAPNGRVKVVIATNIAETSITIEDVEIVVDCGRVNQMTFNSI 993
Query: 355 TGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIW----MTILCQKYNELI 410
TG + SKAS QR G + RT G CF+++T ++ IL +L
Sbjct: 994 TGNSVMSEEWTSKASCRQRAGRAGRTSSGLCFKVFTKSMESQLQDQDTPEILRTSLQQLC 1053
Query: 411 WKM-LSLFSNVLVNF-DF----IDPPXXXXXXXXXXXXXXXGAL--NKAGQ--LTRVGRQ 460
+ L L +N DF I+PP AL N+ Q LT +G
Sbjct: 1054 LHVKLFLKNNKNTTIQDFLNRAIEPPSSEQIQSSINELISIDALKINQQQQQELTPLGYH 1113
Query: 461 MAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLG 520
+A P+D + K ++ ++C D I+TIAA L S F P DK I + F
Sbjct: 1114 LASLPVDVYIGKMLLFGCIFRCLDPILTIAATLNY-KSPFLNPPDKTIRPMD---KFSSP 1169
Query: 521 DVGDRIALLRVYNCWREC---NYSTEWCRENYIQVSSMKRARDIRDQLEGLFARV 572
+ D L+ YN WR+ ++CRENY+ + +++ +D++ Q + + +
Sbjct: 1170 NQSDHQTLINAYNSWRKSIQDGNEYQFCRENYLSIPTLRTIQDLKLQFVEILSEI 1224
Score = 217 (81.4 bits), Expect = 1.8e-47, Sum P(3) = 1.8e-47
Identities = 53/139 (38%), Positives = 81/139 (58%)
Query: 103 EPRWVAAMSVAARVSQEMGV-----KLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIV 157
+PR ++A+ VA RVS E +G VGY IR E S T L + T +LLR I+
Sbjct: 681 QPRRISAIGVAERVSYEWNCGTVENSIGGLVGYQIRNESKRSQSTRLLFCTTGILLRRIL 740
Query: 158 IEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGS 217
++ S +I+DE ER+ D L +L+++I+ R DLK+++ SATL+A++ ++YF
Sbjct: 741 DVSNISDLSHIIIDEVHERSTDNDFLLIILREIISKRKDLKIILMSATLNAKQIANYFKC 800
Query: 218 AP--IFKIPGRRYPVELFY 234
IF IPG +PV+ Y
Sbjct: 801 TDDSIFSIPGFTFPVKNIY 819
Score = 101 (40.6 bits), Expect = 1.8e-47, Sum P(3) = 1.8e-47
Identities = 19/45 (42%), Positives = 31/45 (68%)
Query: 59 EERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE 103
++R++LP++ +E L+ + V+ I ETG GK+TQIPQY+ E
Sbjct: 620 KKRESLPVFKRKKEFLKCLQENQVVVITAETGCGKSTQIPQYILE 664
>UNIPROTKB|E2RNT3 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:AAEX03005146 EMBL:AAEX03005147
RefSeq:XP_537154.2 Ensembl:ENSCAFT00000020976 GeneID:480032
KEGG:cfa:480032 NextBio:20855120 Uniprot:E2RNT3
Length = 1276
Score = 307 (113.1 bits), Expect = 3.0e-47, Sum P(2) = 3.0e-47
Identities = 73/214 (34%), Positives = 122/214 (57%)
Query: 39 EFESELPNKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIP 98
+ ++EL + L + +ER+ LP+ F E+L+A+S V+ I G TG GKTTQ+P
Sbjct: 364 DLKNELMYQLEQDHDLPAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVP 423
Query: 99 QYLYE-----------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDK 141
Q++ + PR ++A+SVA RV+ E G + G GYS+RFE
Sbjct: 424 QFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESVLPRP 483
Query: 142 TV-LKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLL 200
+ + T +LLR++ E + S +IVDE ER ++TD L +L+D++ P+++++
Sbjct: 484 YASIMFCTVGVLLRKL--EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIV 541
Query: 201 ISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFY 234
+ SAT+D F +YF + PI ++ GR YPV+ ++
Sbjct: 542 LMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYF 575
Score = 272 (100.8 bits), Expect = 3.0e-47, Sum P(2) = 3.0e-47
Identities = 87/323 (26%), Positives = 147/323 (45%)
Query: 255 VNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPT 314
+N P G +LVFL G + I ++ L+ G+ +++ P+++ +P E Q K+F+P
Sbjct: 648 LNVP-GAVLVFLPGWNLIYTMQKHLEMNP-DFGSHRYQIL--PLHSQIPREEQRKVFDPV 703
Query: 315 PERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRT 374
P KV+L+TNIAETS+TI+ + YVI KVK + M + SK + QR
Sbjct: 704 PAGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRK 763
Query: 375 GLSERTGPGKCFRLYTLHNYHRI--WMT--ILCQKYNELIWKMLSLFSNVLVNF--DFID 428
G + R PG CF L + + R+ MT + +E+ + L + F I+
Sbjct: 764 GRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIE 823
Query: 429 PPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIIT 488
PP AL+ +LT +GR +A+ PI+P+ K ++ + D + T
Sbjct: 824 PPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAVCT 883
Query: 489 IAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTE----- 543
I+A K + Y NF D +ALL V+ W + E
Sbjct: 884 ISAATCFPEPFISEGK-RLGYIHR---NFAGNRFSDHVALLSVFQAWDDARMGGEEAEIR 939
Query: 544 WCRENYIQVSSMKRARDIRDQLE 566
+C + +++++ + + QL+
Sbjct: 940 FCEHKRLNMATLRMTWEAKVQLK 962
Score = 37 (18.1 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 12/59 (20%), Positives = 23/59 (38%)
Query: 464 FPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDV 522
FP D L++ + D +I++ A N +++ K K + + H V
Sbjct: 970 FPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEGRNALIHKSSV 1028
>WB|WBGene00021365 [details] [associations]
symbol:smgl-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0002119
GO:GO:0032940 GO:GO:0010171 GO:GO:0040011 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00700000104421 EMBL:FO081788 RefSeq:NP_500405.3
ProteinModelPortal:Q9N437 SMR:Q9N437 PaxDb:Q9N437
EnsemblMetazoa:Y37E11AM.1 GeneID:177135 KEGG:cel:CELE_Y37E11AM.1
UCSC:Y37E11AM.1 CTD:177135 WormBase:Y37E11AM.1 InParanoid:Q9N437
OMA:LRADVMC NextBio:895494 Uniprot:Q9N437
Length = 1018
Score = 498 (180.4 bits), Expect = 1.3e-46, P = 1.3e-46
Identities = 148/463 (31%), Positives = 233/463 (50%)
Query: 134 FEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINY 193
FE S KT L ++T+ +LLR++ + LE Y+V+I+DE ER L++D L GLL+DL
Sbjct: 153 FETTKSQKTKLLFLTEGLLLRQMEKDSLLEKYNVIILDEVHERHLTSDLLIGLLRDLCTK 212
Query: 194 RPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFY-----------TKAPEVD- 241
R DLKL++ SAT++ + F YF AP+ ++PGR +P+++ + K ++D
Sbjct: 213 RDDLKLILMSATINLDLFKGYFEGAPVVQVPGRLFPIDVRWHPIKQFIDQSDKKTHKIDP 272
Query: 242 --YIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILK---QRTRGLGTKIAELIIC 296
Y++ + Q + GD L+FL G EI E LK + T G II
Sbjct: 273 EPYLKILELIDKQFPSTQ-RGDALIFLNGVAEISMVAEHLKNYAELTNGW-------IIL 324
Query: 297 PIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTG 356
+++ L E Q K+F+ P RK +L+TN+AETS+TIDGI++VI G + + P TG
Sbjct: 325 MLHSTLSVEEQDKVFDQAPVGIRKCILSTNVAETSVTIDGIRFVIDSGKVNLIKHEPGTG 384
Query: 357 MESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIWMTILCQ----KYNELIWK 412
+ L +SKASANQR G + RTGPG C+RLY+ + ++ + + E+ K
Sbjct: 385 TQKLTEFWVSKASANQRKGRAGRTGPGICYRLYSQEQFEKMDDFTVSEINRVSLQEMALK 444
Query: 413 MLSLFSNVLVN-FDFIDPPXXXXXXXXXXXXXXXGALNK-AGQ---LTRVGRQMAEFPID 467
M+SL + F FI+ P L G LT +G +++ P++
Sbjct: 445 MISLNLGLDPRTFPFIEKPSEDVLNEGLEVLKFQRVLRSDRGDILTLTALGNMVSKLPVE 504
Query: 468 PKLSKTIVSLDKYKCS-DEI---ITIAAMLFVGNSIFYRP-KDKQIYADNARMNFHLGDV 522
++K +V Y C DE+ +T+AA L V + R ++ +I A + LGD
Sbjct: 505 VPIAKMLV----YGCVVDELEVMLTVAAGLSVQSPFTNRSYRELEIVERRASLTSPLGDP 560
Query: 523 GDRIALLRVYNCWRECNYSTE-WCRENYIQVSSMKRARDIRDQ 564
I++ R + + + W EN I + +R Q
Sbjct: 561 FTLISIFREWVLQKAFEGTARRWTMENGIDEHRLYEISKLRAQ 603
>UNIPROTKB|C3XYZ4 [details] [associations]
symbol:BRAFLDRAFT_65715 "Putative uncharacterized protein"
species:7739 "Branchiostoma floridae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0007140 "male meiosis" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0009566 "fertilization"
evidence=ISS] [GO:0034587 "piRNA metabolic process" evidence=ISS]
[GO:0043046 "DNA methylation involved in gamete generation"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00028 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 InterPro:IPR002999 GO:GO:0005524
GO:GO:0005634 GO:GO:0008270 GO:GO:0009566 GO:GO:0007283
GO:GO:0003676 GO:GO:0007140 Pfam:PF00567 GO:GO:0043046
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0034587
GO:GO:0008026 GO:GO:0071547 OMA:INDWFTI EMBL:GG666475
RefSeq:XP_002610548.1 GeneID:7220579 KEGG:bfo:BRAFLDRAFT_65715
eggNOG:NOG270748 Uniprot:C3XYZ4
Length = 1475
Score = 272 (100.8 bits), Expect = 1.4e-46, Sum P(3) = 1.4e-46
Identities = 78/239 (32%), Positives = 124/239 (51%)
Query: 24 VDFFSESVFDGDNFDEFESELPNKSV-VKSTLEMLQEERKTLPIYPFWEELLQAVSGYPV 82
+D S + GD + E P +SV + TLPI + EE++ V V
Sbjct: 101 LDLDSINSLAGDLGRQTLEEDPLRSVNIYRNYNFNHTYNPTLPITGYQEEIITTVESNSV 160
Query: 83 LAIVGETGSGKTTQIPQYL---Y------------EPRWVAAMSVAARVSQEMGVKLGHE 127
I G+TGSGKTTQ+PQY+ Y +PR +AA+S+A RV+ E G +LG
Sbjct: 161 TVIQGDTGSGKTTQVPQYILDHYARANRWCNIVVTQPRRIAAISIARRVADERGWRLGGI 220
Query: 128 VGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLL 187
VGY + + S+ T L ++T +LL++++ ++ ++ +I+DE ER TD +
Sbjct: 221 VGYQVGMDKQQSEDTRLSFVTTGVLLQKLINTKNMNQFTHVILDEVHERDQETDFALLVA 280
Query: 188 KDLI--NYRPDLKLLISSATLDAEKFSDYFG--------SAPIFKIPGRRYPVELFYTK 236
+ L+ N R +K+++ SATLD+ F+ YF AP+ + GR +PV FY +
Sbjct: 281 RKLLRSNSR-HVKVVLMSATLDSSMFAGYFSIPVRGELAPAPVVTVEGRLFPVTEFYVE 338
Score = 215 (80.7 bits), Expect = 1.4e-46, Sum P(3) = 1.4e-46
Identities = 50/135 (37%), Positives = 79/135 (58%)
Query: 260 GDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERAR 319
G +LVFL G EI +E+L T T+ +L + P+++ + +E QA++F P R
Sbjct: 392 GTVLVFLPGLAEINTLDELLAHET----TRY-KLWVLPLHSTITSEEQAQVFVPPRPHQR 446
Query: 320 KVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSER 379
KV+L+TNIAE+S+T+ IKYVI K +P+T +SL +N S+A+ QR G + R
Sbjct: 447 KVILSTNIAESSITVPDIKYVIDFCLTKCMVCDPETNYQSLQLNWASQANCTQRKGRAGR 506
Query: 380 TGPGKCFRLYTLHNY 394
G+ +R+ + Y
Sbjct: 507 VSSGRAYRMVSREFY 521
Score = 137 (53.3 bits), Expect = 1.4e-46, Sum P(3) = 1.4e-46
Identities = 35/139 (25%), Positives = 63/139 (45%)
Query: 452 GQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYAD 511
G LT +GR +A P+D ++ K ++ + E++ I A L + S F +P + +
Sbjct: 551 GDLTFIGRVLAALPVDVRVGKLLLLGHVFGYLKEVLVIGASLSL-KSFFAKPFRGDLESY 609
Query: 512 NARMNFHLGDVGDRIALLRVYNCWREC---------NYSTEWCRENYIQVSSMKRARDIR 562
++M + G D +A+L Y W++C EW + N +Q+ MK +
Sbjct: 610 RSKMAWSEGTFSDCLAMLNAYKKWQDCCQAGMFRNRQQELEWAKRNMLQLKRMKEMSAVA 669
Query: 563 DQLEGLFARVEIDTSIYSN 581
+L+ A I S+ N
Sbjct: 670 KELQDRLANFNIRVSLERN 688
Score = 57 (25.1 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 22/85 (25%), Positives = 38/85 (44%)
Query: 323 LATNIAETSLTIDGIKYV-IHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTG 381
LA ++ +L D ++ V I+ + +YNP + I+ +N T + TG
Sbjct: 109 LAGDLGRQTLEEDPLRSVNIYRNYNFNHTYNPTLPITGYQEEIITTVESNSVTVIQGDTG 168
Query: 382 PGKCFRL--YTLHNYHRI--WMTIL 402
GK ++ Y L +Y R W I+
Sbjct: 169 SGKTTQVPQYILDHYARANRWCNIV 193
Score = 43 (20.2 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 9/44 (20%), Positives = 22/44 (50%)
Query: 270 DEIERAEEILKQRTRGLGTKIAELI---ICPIYANLPTELQAKI 310
DE + + +++ R + + +L+ +C + N P EL+ +
Sbjct: 1335 DETWKRKHMIELREKAYNSNEPQLVRCEVCDVEVNTPRELKLHV 1378
Score = 38 (18.4 bits), Expect = 8.6e-22, Sum P(3) = 8.6e-22
Identities = 11/41 (26%), Positives = 15/41 (36%)
Query: 65 PIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYEPR 105
P+ P + G A G + IP+Y EPR
Sbjct: 23 PLVPLNSVPRSKLGGKDFDAATGGPAKPEAPMIPRYKKEPR 63
>UNIPROTKB|E2QTL7 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
Ensembl:ENSCAFT00000013769 Uniprot:E2QTL7
Length = 988
Score = 287 (106.1 bits), Expect = 1.4e-46, Sum P(3) = 1.4e-46
Identities = 77/269 (28%), Positives = 127/269 (47%)
Query: 309 KIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKA 368
++F+ TP RK+V+ATNIAETS+TID + YVI G K ++ + + ++ +SKA
Sbjct: 515 QVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKA 574
Query: 369 SANQRTGLSERTGPGKCFRLYT------LHNYHRIWMTILCQKYNELIWKMLSLFSNVLV 422
+A QR G + R PG C+ LY L +Y IL EL ++ L +
Sbjct: 575 NAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQL--PEILRTPLEELCLQIKILRLGGIA 632
Query: 423 NF--DFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKY 480
F +DPP AL+K +LT +G +A P++P + K I+ +
Sbjct: 633 YFLSRLMDPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALF 692
Query: 481 KCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECN- 539
C D ++TIAA L + F P K+ AD R D + ++ + W E
Sbjct: 693 CCLDPVLTIAASLSFKDP-FVIPLGKEKIADARRKELAKDTKSDHLTVVNAFEGWEEARR 751
Query: 540 ----YSTEWCRENYIQVSSMKRARDIRDQ 564
Y ++C E ++ ++++ +++ Q
Sbjct: 752 RGFRYEKDYCWEYFLSSNTLQMLHNMKGQ 780
Score = 267 (99.0 bits), Expect = 1.4e-46, Sum P(3) = 1.4e-46
Identities = 67/194 (34%), Positives = 107/194 (55%)
Query: 40 FESELPNKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQ 99
F +LP+ + K + M+ + T+ V+ + +L E G G +I
Sbjct: 197 FREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQF-ILDDYIERGKGSACRI-- 253
Query: 100 YLYEPRWVAAMSVAARVSQEMGVKLGH--EVGYSIRFEDCTSDKT-VLKYMTDCMLLREI 156
+PR ++A+SVA RV+ E G+ GY IR + K + Y T ++L+ +
Sbjct: 254 VCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWL 313
Query: 157 VIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFG 216
+ L S S +++DE ER L +D L ++KDL+N+RPDLK+++ SATL+AEKFS+YFG
Sbjct: 314 QSDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVILMSATLNAEKFSEYFG 373
Query: 217 SAPIFKIPGRRYPV 230
+ P+ IPG +PV
Sbjct: 374 NCPMIHIPGFTFPV 387
Score = 127 (49.8 bits), Expect = 5.3e-32, Sum P(3) = 5.3e-32
Identities = 33/96 (34%), Positives = 52/96 (54%)
Query: 12 REKCTFEIEDKIVDFFSESVFDGDNFD-EFESEL-PNKSVVKSTLEMLQEE--RKTLPIY 67
+EK TF I DK +D SE + + D + +L + KS L ++ + R+ LP Y
Sbjct: 145 QEKRTFRIRDKYIDRDSEYLLQENEPDVALDQQLLEDLRKKKSDLRYIEMQHFREKLPSY 204
Query: 68 PFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE 103
+EL+ + + V I GETG GKTTQ+ Q++ +
Sbjct: 205 GMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILD 240
Score = 61 (26.5 bits), Expect = 1.4e-46, Sum P(3) = 1.4e-46
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 241 DYIEAAIVTALQIHV--NEPTGDILVFLTGQDEIERAEEIL 279
D ++ ++ AL H+ E G ILVFL G D I ++L
Sbjct: 462 DKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLL 502
>UNIPROTKB|F1SLI4 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:CU633694 Ensembl:ENSSSCT00000012419
Uniprot:F1SLI4
Length = 1222
Score = 295 (108.9 bits), Expect = 1.0e-45, Sum P(2) = 1.0e-45
Identities = 90/341 (26%), Positives = 158/341 (46%)
Query: 222 KIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVN---EPTGDILVFLTGQDEIERAEEI 278
K+ +YP + ++ + ++ +VT L +H++ EP G IL FL G EI+ ++
Sbjct: 657 KLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQR 715
Query: 279 LKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIK 338
L++ LG ++ +I P+++N+P Q IF+ P RK+VLATNIAETS+TI+ I
Sbjct: 716 LQE---ALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIV 772
Query: 339 YVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIW 398
+V+ G K + Y+ KT + L +S+A+ QR G + R G + L+ ++
Sbjct: 773 HVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMV 832
Query: 399 M----TILCQKYNELIWKM-LSLFSNVLVNF--DFIDPPXXXXXXXXXXXXXXXGALNKA 451
IL L+ + + + V F +D P G L++
Sbjct: 833 PFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQR 892
Query: 452 GQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYAD 511
LT +G+++A DP+L+K IV ++C ++ + + L F + D
Sbjct: 893 EYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPFSSSLQNRAEVD 950
Query: 512 NARMNFHLGDVGDRIALLRVYNCWREC-NYSTEWCRENYIQ 551
+ D +A +R + W E + RENY++
Sbjct: 951 KVKALLSHDSGSDHLAFVRAVSGWEEVLRWQDRSSRENYLE 991
Score = 270 (100.1 bits), Expect = 1.0e-45, Sum P(2) = 1.0e-45
Identities = 63/155 (40%), Positives = 89/155 (57%)
Query: 81 PVLAIVGETGSGKTTQIPQYLYEPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSD 140
P L + G+ + + +PR ++A+SVA RVS E+G L VG+ +R E
Sbjct: 496 PQLLLERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPA 555
Query: 141 KT-VLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKL 199
+ L + T +LLR++ PSLE S +IVDE ER ++TD L LLK L P L+L
Sbjct: 556 RGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRL 615
Query: 200 LISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFY 234
++ SAT D E+FS YFG P+ K+PG YPV+ Y
Sbjct: 616 VLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHY 650
Score = 118 (46.6 bits), Expect = 9.1e-30, Sum P(2) = 9.1e-30
Identities = 32/85 (37%), Positives = 49/85 (57%)
Query: 59 EERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYEPRWV-----AAMSVA 113
+E LP+ P + +L A+ +PV+ I G+TG GKTT+IPQ L E R+V A +V
Sbjct: 457 QEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLE-RYVTEGRGARCNVI 515
Query: 114 A----RVSQ-EMGVKLGHEVGYSIR 133
R+S + ++ HE+G S+R
Sbjct: 516 ITQPRRISAVSVAQRVSHELGPSLR 540
>RGD|1306837 [details] [associations]
symbol:Dhx37 "DEAH (Asp-Glu-Ala-His) box polypeptide 37"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
RGD:1306837 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647
OMA:AKLQPRT OrthoDB:EOG4P2Q1J IPI:IPI00391385 RefSeq:NP_001099396.2
UniGene:Rn.24493 Ensembl:ENSRNOT00000030823 GeneID:288647
KEGG:rno:288647 UCSC:RGD:1306837 NextBio:628468 ArrayExpress:D4A1R0
Uniprot:D4A1R0
Length = 1150
Score = 293 (108.2 bits), Expect = 1.4e-45, Sum P(2) = 1.4e-45
Identities = 75/180 (41%), Positives = 106/180 (58%)
Query: 103 EPRWVAAMSVAARVSQEMGVKLGHEV-GYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPS 161
EPR VAA++++ RV++EM L H V Y IR+E +++T +K+MTD +LL+EI +
Sbjct: 301 EPRRVAAVAMSQRVAKEMN--LSHRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFL 358
Query: 162 LESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPD----LKLLISSATLDAEKFSD---- 213
L Y V+I+DEA ER++ TD L GLL ++ R LKLLI SATL E F+
Sbjct: 359 LLKYKVVIIDEAHERSVYTDILLGLLSRIVALRAKRHLPLKLLIMSATLRVEDFTQNQRL 418
Query: 214 YFGSAPIFKIPGRRYPVELFYTK-APEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEI 272
+ P+ K+ R++PV + + K P DY +IH P G ILVFLTGQ E+
Sbjct: 419 FTTPPPVIKVESRQFPVTVHFNKRTPLDDYSGECFRKVCKIHRMLPAGGILVFLTGQAEV 478
Score = 293 (108.2 bits), Expect = 1.4e-45, Sum P(2) = 1.4e-45
Identities = 75/191 (39%), Positives = 113/191 (59%)
Query: 50 VKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------ 103
V T EM QEER LPI + +++AV+ +P++ + GETGSGKTTQ+PQ+LYE
Sbjct: 235 VNRTPEM-QEERLKLPILAEEQAIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGYSSE 293
Query: 104 --------PRWVAAMSVAARVSQEMGVKLGHEV-GYSIRFEDCTSDKTVLKYMTDCMLLR 154
PR VAA++++ RV++EM L H V Y IR+E +++T +K+MTD +LL+
Sbjct: 294 DSIIGVTEPRRVAAVAMSQRVAKEMN--LSHRVVSYQIRYEGNVTEETRIKFMTDGVLLK 351
Query: 155 EIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAE-KFSD 213
EI + L Y V+I+DEA ER++ TD L GLL ++ R L + + A + D
Sbjct: 352 EIQKDFLLLKYKVVIIDEAHERSVYTDILLGLLSRIVALRAKRHLPLKLLIMSATLRVED 411
Query: 214 YFGSAPIFKIP 224
+ + +F P
Sbjct: 412 FTQNQRLFTTP 422
Score = 270 (100.1 bits), Expect = 1.4e-45, Sum P(2) = 1.4e-45
Identities = 69/189 (36%), Positives = 105/189 (55%)
Query: 293 LIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYN 352
L + P+Y+ L E QA++F+P PE R V+ATN+AETSLTI GIKYV+ G K + Y+
Sbjct: 581 LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVIATNVAETSLTIPGIKYVVDCGKVKKRYYD 640
Query: 353 PKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYT---LHNYHRIWMTILCQK-YNE 408
TG+ S V +S+ASA+QR G + RT PG C+RLY+ ++ + + ++ +
Sbjct: 641 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEQFPPPEITRRPVED 700
Query: 409 LIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGR-QMAEF--P 465
LI +M +L ++NF F PP GAL + R+ + QM++ P
Sbjct: 701 LILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPPKQERMKKLQMSQLSCP 760
Query: 466 IDPKLSKTI 474
I L +T+
Sbjct: 761 ITA-LGRTM 768
Score = 79 (32.9 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 45/190 (23%), Positives = 74/190 (38%)
Query: 408 ELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALN-----------KAGQL-- 454
+LI +M +L ++NF F PP GAL + QL
Sbjct: 700 DLILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPPKQERMKKLQMSQLSC 759
Query: 455 --TRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFY---RP--KDKQ 507
T +GR M+ FP+ P+ +K + ++ C I I A + V +F RP +++
Sbjct: 760 PITALGRTMSTFPVAPRYAKMLALSQQHGCLPYTIAIVAAMTV-RELFEELDRPAASEEE 818
Query: 508 I---------YADNARMNFHLG---DVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSM 555
+ A R G +GD + LL S ++C+ N ++ +M
Sbjct: 819 LAELKGRRTRVAQMKRTWAGQGASLKLGDLMVLLGAVGACEYAGCSPQFCQANGLRYKAM 878
Query: 556 KRARDIRDQL 565
R +R QL
Sbjct: 879 LEIRRLRGQL 888
>UNIPROTKB|J9P3P6 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047198
Uniprot:J9P3P6
Length = 1135
Score = 291 (107.5 bits), Expect = 1.4e-45, Sum P(2) = 1.4e-45
Identities = 89/341 (26%), Positives = 157/341 (46%)
Query: 222 KIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVN---EPTGDILVFLTGQDEIERAEEI 278
K+ +YP + ++ + ++ +VT L +H++ EP G IL FL G EI+ ++
Sbjct: 629 KLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQR 687
Query: 279 LKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIK 338
L++ LG ++ +I P+++N+P Q IF+ P RK+VLATNIAETS+T++ I
Sbjct: 688 LQE---ALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIV 744
Query: 339 YVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIW 398
+V+ G K + Y+ KT + L +S+A+ QR G + R G + L+ ++
Sbjct: 745 HVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMV 804
Query: 399 M----TILCQKYNELIWKM-LSLFSNVLVNF--DFIDPPXXXXXXXXXXXXXXXGALNKA 451
IL L+ + + + V F +D P G L++
Sbjct: 805 PFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQR 864
Query: 452 GQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYAD 511
LT +G+++A DP+L+K IV ++C ++ + + L F + D
Sbjct: 865 EYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPFSSSLQNRAEVD 922
Query: 512 NARMNFHLGDVGDRIALLRVYNCWREC-NYSTEWCRENYIQ 551
+ D +A +R W E + RENY++
Sbjct: 923 KVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLE 963
Score = 272 (100.8 bits), Expect = 1.4e-45, Sum P(2) = 1.4e-45
Identities = 63/155 (40%), Positives = 89/155 (57%)
Query: 81 PVLAIVGETGSGKTTQIPQYLYEPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSD 140
P L + G+ + + +PR ++A+SVA RVS E+G L VG+ +R E
Sbjct: 468 PQLLLERYVSEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPA 527
Query: 141 KT-VLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKL 199
+ L + T +LLR++ PSLE S +IVDE ER ++TD L LLK L P L+L
Sbjct: 528 RGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRL 587
Query: 200 LISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFY 234
++ SAT D E+FS YFG P+ K+PG YPV+ Y
Sbjct: 588 VLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHY 622
Score = 116 (45.9 bits), Expect = 3.3e-29, Sum P(2) = 3.3e-29
Identities = 30/85 (35%), Positives = 49/85 (57%)
Query: 59 EERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYEPRWVAA--------- 109
+E LP+ P + +L A+ +PV+ I G+TG GKTT+IPQ L E R+V+
Sbjct: 429 QEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLE-RYVSEGRGARCNVI 487
Query: 110 MSVAARVSQ-EMGVKLGHEVGYSIR 133
++ R+S + ++ HE+G S+R
Sbjct: 488 ITQPRRISAVSVAQRVSHELGPSLR 512
>UNIPROTKB|F1N0J0 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00717186 UniGene:Bt.24588 OMA:LHKEERY
EMBL:DAAA02054438 Ensembl:ENSBTAT00000030623 Uniprot:F1N0J0
Length = 1220
Score = 294 (108.6 bits), Expect = 1.7e-45, Sum P(2) = 1.7e-45
Identities = 90/341 (26%), Positives = 158/341 (46%)
Query: 222 KIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVN---EPTGDILVFLTGQDEIERAEEI 278
K+ +YP + ++ + ++ +VT L +H++ EP G IL FL G EI+ ++
Sbjct: 655 KLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQR 713
Query: 279 LKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIK 338
L++ LG ++ +I P+++N+P Q IF+ P RK+VLATNIAETS+TI+ I
Sbjct: 714 LQE---ALGMHESKYLILPVHSNIPMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIV 770
Query: 339 YVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIW 398
+V+ G K + Y+ KT + L +S+A+ QR G + R G + L+ ++
Sbjct: 771 HVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMA 830
Query: 399 M----TILCQKYNELIWKM-LSLFSNVLVNF--DFIDPPXXXXXXXXXXXXXXXGALNKA 451
IL L+ + + + V F +D P G L++
Sbjct: 831 PFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQR 890
Query: 452 GQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYAD 511
LT +G+++A DP+L+K IV ++C ++ + + L F + D
Sbjct: 891 EYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPFSSSLQNRAEVD 948
Query: 512 NARMNFHLGDVGDRIALLRVYNCWREC-NYSTEWCRENYIQ 551
+ D +A +R + W E + RENY++
Sbjct: 949 KVKALLSHDSGSDHLAFVRAVSGWEEVLRWQDRSSRENYLE 989
Score = 269 (99.8 bits), Expect = 1.7e-45, Sum P(2) = 1.7e-45
Identities = 62/155 (40%), Positives = 89/155 (57%)
Query: 81 PVLAIVGETGSGKTTQIPQYLYEPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSD 140
P L + G+ + + +PR ++A+SVA RVS E+G L VG+ +R E
Sbjct: 494 PQLLLERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPA 553
Query: 141 KT-VLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKL 199
+ L + T +LLR++ PSLE S ++VDE ER ++TD L LLK L P L+L
Sbjct: 554 RGGALLFCTVGILLRKLQSNPSLEGVSHVVVDEVHERDVNTDFLLILLKGLQRLNPALRL 613
Query: 200 LISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFY 234
++ SAT D E+FS YFG P+ K+PG YPV+ Y
Sbjct: 614 VLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHY 648
Score = 118 (46.6 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 32/85 (37%), Positives = 49/85 (57%)
Query: 59 EERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYEPRWV-----AAMSVA 113
+E LP+ P + +L A+ +PV+ I G+TG GKTT+IPQ L E R+V A +V
Sbjct: 455 QEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLE-RYVTEGRGARCNVI 513
Query: 114 A----RVSQ-EMGVKLGHEVGYSIR 133
R+S + ++ HE+G S+R
Sbjct: 514 ITQPRRISAVSVAQRVSHELGPSLR 538
>UNIPROTKB|E2RL62 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:AAEX03012236
Ensembl:ENSCAFT00000020710 NextBio:20852259 Uniprot:E2RL62
Length = 1222
Score = 291 (107.5 bits), Expect = 1.8e-45, Sum P(2) = 1.8e-45
Identities = 89/341 (26%), Positives = 157/341 (46%)
Query: 222 KIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVN---EPTGDILVFLTGQDEIERAEEI 278
K+ +YP + ++ + ++ +VT L +H++ EP G IL FL G EI+ ++
Sbjct: 657 KLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQR 715
Query: 279 LKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIK 338
L++ LG ++ +I P+++N+P Q IF+ P RK+VLATNIAETS+T++ I
Sbjct: 716 LQE---ALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIV 772
Query: 339 YVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIW 398
+V+ G K + Y+ KT + L +S+A+ QR G + R G + L+ ++
Sbjct: 773 HVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMV 832
Query: 399 M----TILCQKYNELIWKM-LSLFSNVLVNF--DFIDPPXXXXXXXXXXXXXXXGALNKA 451
IL L+ + + + V F +D P G L++
Sbjct: 833 PFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQR 892
Query: 452 GQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYAD 511
LT +G+++A DP+L+K IV ++C ++ + + L F + D
Sbjct: 893 EYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPFSSSLQNRAEVD 950
Query: 512 NARMNFHLGDVGDRIALLRVYNCWREC-NYSTEWCRENYIQ 551
+ D +A +R W E + RENY++
Sbjct: 951 KVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLE 991
Score = 272 (100.8 bits), Expect = 1.8e-45, Sum P(2) = 1.8e-45
Identities = 63/155 (40%), Positives = 89/155 (57%)
Query: 81 PVLAIVGETGSGKTTQIPQYLYEPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSD 140
P L + G+ + + +PR ++A+SVA RVS E+G L VG+ +R E
Sbjct: 496 PQLLLERYVSEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPA 555
Query: 141 KT-VLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKL 199
+ L + T +LLR++ PSLE S +IVDE ER ++TD L LLK L P L+L
Sbjct: 556 RGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRL 615
Query: 200 LISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFY 234
++ SAT D E+FS YFG P+ K+PG YPV+ Y
Sbjct: 616 VLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHY 650
Score = 116 (45.9 bits), Expect = 4.2e-29, Sum P(2) = 4.2e-29
Identities = 30/85 (35%), Positives = 49/85 (57%)
Query: 59 EERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYEPRWVAA--------- 109
+E LP+ P + +L A+ +PV+ I G+TG GKTT+IPQ L E R+V+
Sbjct: 457 QEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLE-RYVSEGRGARCNVI 515
Query: 110 MSVAARVSQ-EMGVKLGHEVGYSIR 133
++ R+S + ++ HE+G S+R
Sbjct: 516 ITQPRRISAVSVAQRVSHELGPSLR 540
>UNIPROTKB|H7C109 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 EMBL:AC018693 InterPro:IPR011709 Pfam:PF07717
HGNC:HGNC:20086 ChiTaRS:DHX57 Ensembl:ENST00000452978
Uniprot:H7C109
Length = 665
Score = 383 (139.9 bits), Expect = 1.8e-45, Sum P(2) = 1.8e-45
Identities = 109/348 (31%), Positives = 175/348 (50%)
Query: 240 VDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIY 299
++ IEA + + + P G ILVFL G EI+ E L+ + + +I P++
Sbjct: 152 LELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLH 211
Query: 300 ANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMES 359
++L +E Q +F P K++++TNIAETS+TID + YVI G K K Y+ GMES
Sbjct: 212 SSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMES 271
Query: 360 LLVNPISKASANQRTGLSERTGPGKCFRLYTLHNY-HRIWMTIL--CQKY--NELIW--K 412
L +S+A+A QR G + R G CF L+T H+Y H++ L Q+ +L K
Sbjct: 272 LEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIK 331
Query: 413 MLSLFS--NVLVNFD-FIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPK 469
+L +FS N+ F I+PP GAL +LT +G +A P+D +
Sbjct: 332 ILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVR 391
Query: 470 LSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALL 529
+ K ++ ++C D +TIAA L S F P DK+ A+ ++ F + D +ALL
Sbjct: 392 IGKLMLFGSIFRCLDPALTIAASLAF-KSPFVSPWDKKEEANQKKLEFAFAN-SDYLALL 449
Query: 530 RVYNCW----RE-CNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARV 572
+ Y W +E S +CR+N++ ++ ++ Q L + +
Sbjct: 450 QAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDI 497
Score = 155 (59.6 bits), Expect = 1.8e-45, Sum P(2) = 1.8e-45
Identities = 28/54 (51%), Positives = 41/54 (75%)
Query: 181 DNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFY 234
D L +LKD+++ RP L++++ SATL+AE FSDYF S P+ IPGR +PV+ F+
Sbjct: 2 DFLLLVLKDIVSQRPGLQVILMSATLNAELFSDYFNSCPVITIPGRTFPVDQFF 55
>UNIPROTKB|E1BNQ2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 EMBL:DAAA02045204
IPI:IPI00698261 RefSeq:NP_001192890.1 UniGene:Bt.8113 PRIDE:E1BNQ2
Ensembl:ENSBTAT00000027206 GeneID:529207 KEGG:bta:529207
OMA:ANCRDAL NextBio:20874985 Uniprot:E1BNQ2
Length = 1155
Score = 289 (106.8 bits), Expect = 2.0e-45, Sum P(2) = 2.0e-45
Identities = 73/179 (40%), Positives = 105/179 (58%)
Query: 103 EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
EPR VAA++++ RV++EM + V Y IR+E +++T +K+MTD +LL+EI + L
Sbjct: 303 EPRRVAAVAMSQRVAKEMNLS-PRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLL 361
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPD----LKLLISSATLDAEKFSD----Y 214
Y V+I+DEA ER++ TD L GLL ++ R LKLLI SATL E F+ +
Sbjct: 362 LKYKVVIIDEAHERSVYTDILIGLLSRIVCLREKRHLPLKLLIMSATLRVEDFTQNQRLF 421
Query: 215 FGSAPIFKIPGRRYPVELFYTK-APEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEI 272
P+ K+ R++PV + + K P DY +IH P G ILVFLTGQ E+
Sbjct: 422 TQPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQAEV 480
Score = 282 (104.3 bits), Expect = 1.2e-44, Sum P(2) = 1.2e-44
Identities = 70/183 (38%), Positives = 109/183 (59%)
Query: 57 LQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------------- 103
+QEER LPI + +++AV+ +P++ I GETGSGKTTQ+PQ+LYE
Sbjct: 243 MQEERLKLPILSEEQVIMEAVAEHPIVIICGETGSGKTTQVPQFLYEAGYSSDNSVIGVT 302
Query: 104 -PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
PR VAA++++ RV++EM + V Y IR+E +++T +K+MTD +LL+EI + L
Sbjct: 303 EPRRVAAVAMSQRVAKEMNLS-PRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLL 361
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAE-KFSDYFGSAPIF 221
Y V+I+DEA ER++ TD L GLL ++ R L + + A + D+ + +F
Sbjct: 362 LKYKVVIIDEAHERSVYTDILIGLLSRIVCLREKRHLPLKLLIMSATLRVEDFTQNQRLF 421
Query: 222 KIP 224
P
Sbjct: 422 TQP 424
Score = 273 (101.2 bits), Expect = 2.0e-45, Sum P(2) = 2.0e-45
Identities = 68/191 (35%), Positives = 105/191 (54%)
Query: 293 LIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYN 352
L + P+Y+ L E QA++F+P PE R V+ATN+AETSLTI GIKYV+ G K + Y+
Sbjct: 586 LHVLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRHYD 645
Query: 353 PKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYT---LHNYHRIWMTILCQK-YNE 408
TG+ S V +S+ASA+QR G + RT PG C+RLY+ ++ + + ++ +
Sbjct: 646 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEKYPPPEITRRPVED 705
Query: 409 LIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALN---KAGQLTRVGRQMAEFP 465
LI +M +L ++NF F PP GAL K ++ ++ R P
Sbjct: 706 LILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPPKTERVKQLQRSRLSCP 765
Query: 466 IDPKLSKTIVS 476
I +L +T+ +
Sbjct: 766 IT-ELGRTMAT 775
Score = 94 (38.1 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 48/190 (25%), Positives = 75/190 (39%)
Query: 408 ELIWKMLSLFSNVLVNFDFIDPPXXXXXXXXXXXXXXXGALN------KAGQL------- 454
+LI +M +L ++NF F PP GAL + QL
Sbjct: 705 DLILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPPKTERVKQLQRSRLSC 764
Query: 455 --TRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFY---RP--KDKQ 507
T +GR MA FP+ P+ +K + ++ C ITI A + V +F RP D++
Sbjct: 765 PITELGRTMATFPVAPRYAKMLALSRQHGCLPYTITIVAAMTV-RELFEELDRPAASDEE 823
Query: 508 IY---ADNARM----NFHLGD-----VGDRIALLRVYNCWRECNYSTEWCRENYIQVSSM 555
+ AR+ G +GD + LL S ++C N ++ +M
Sbjct: 824 LARLKGKRARVAQMKRIWAGQGASLKLGDLMVLLGAVGACEYAGCSPQFCEANGLRYKAM 883
Query: 556 KRARDIRDQL 565
R +R QL
Sbjct: 884 MEIRRLRGQL 893
Score = 39 (18.8 bits), Expect = 4.1e-19, Sum P(2) = 4.1e-19
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 161 SLESYSVLIVDEAQE 175
SL+SYSVL E E
Sbjct: 533 SLDSYSVLPAGEGDE 547
>RGD|1308888 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA;ISO;ISS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA;ISO;ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOGENOM:HOG000112212 HOVERGEN:HBG081437 KO:K13185 OrthoDB:EOG4VHK5M
EMBL:BC091359 IPI:IPI00949701 RefSeq:NP_001013267.1
UniGene:Rn.163034 ProteinModelPortal:Q5BJS0 SMR:Q5BJS0
PhosphoSite:Q5BJS0 PRIDE:Q5BJS0 Ensembl:ENSRNOT00000064600
GeneID:367172 KEGG:rno:367172 UCSC:RGD:1308888 NextBio:690809
ArrayExpress:Q5BJS0 Genevestigator:Q5BJS0
GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 291 (107.5 bits), Expect = 2.7e-45, Sum P(2) = 2.7e-45
Identities = 89/341 (26%), Positives = 157/341 (46%)
Query: 222 KIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVN---EPTGDILVFLTGQDEIERAEEI 278
K+ +YP + ++ + ++ +VT L +H++ EP G IL FL G EI+ ++
Sbjct: 629 KLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQR 687
Query: 279 LKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIK 338
L++ LG ++ +I P+++N+P Q IF+ P RK+VLATNIAETS+T++ I
Sbjct: 688 LQE---ALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIV 744
Query: 339 YVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIW 398
+V+ G K + Y+ KT + L +S+A+ QR G + R G + L+ ++
Sbjct: 745 HVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMV 804
Query: 399 M----TILCQKYNELIWKM-LSLFSNVLVNF--DFIDPPXXXXXXXXXXXXXXXGALNKA 451
IL L+ + + + V F +D P G L++
Sbjct: 805 PFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQR 864
Query: 452 GQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYAD 511
LT +G+++A DP+L+K IV ++C ++ + + L F + D
Sbjct: 865 EYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPFSSSLQNRAEVD 922
Query: 512 NARMNFHLGDVGDRIALLRVYNCWREC-NYSTEWCRENYIQ 551
+ D +A +R W E + RENY++
Sbjct: 923 KVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLE 963
Score = 270 (100.1 bits), Expect = 2.7e-45, Sum P(2) = 2.7e-45
Identities = 63/155 (40%), Positives = 89/155 (57%)
Query: 81 PVLAIVGETGSGKTTQIPQYLYEPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSD 140
P L + G+ + + +PR ++A+SVA RVS E+G L VG+ +R E
Sbjct: 468 PQLLLERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPA 527
Query: 141 KT-VLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKL 199
+ L + T +LLR++ PSLE S +IVDE ER ++TD L LLK L P L+L
Sbjct: 528 RGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRL 587
Query: 200 LISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFY 234
++ SAT D E+FS YFG P+ K+PG YPV+ Y
Sbjct: 588 VLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHY 622
Score = 116 (45.9 bits), Expect = 3.9e-29, Sum P(2) = 3.9e-29
Identities = 32/85 (37%), Positives = 49/85 (57%)
Query: 59 EERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYEPRWV-----AAMSVA 113
+E LP+ P + +L A+ +PV+ I G+TG GKTT+IPQ L E R+V A +V
Sbjct: 429 QEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLE-RYVTEGRGARCNVI 487
Query: 114 A----RVSQ-EMGVKLGHEVGYSIR 133
R+S + ++ HE+G S+R
Sbjct: 488 ITQPRRISAVSVAQRVSHELGPSLR 512
>UNIPROTKB|Q5BJS0 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1308888 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:BC091359 IPI:IPI00949701
RefSeq:NP_001013267.1 UniGene:Rn.163034 ProteinModelPortal:Q5BJS0
SMR:Q5BJS0 PhosphoSite:Q5BJS0 PRIDE:Q5BJS0
Ensembl:ENSRNOT00000064600 GeneID:367172 KEGG:rno:367172
UCSC:RGD:1308888 NextBio:690809 ArrayExpress:Q5BJS0
Genevestigator:Q5BJS0 GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 291 (107.5 bits), Expect = 2.7e-45, Sum P(2) = 2.7e-45
Identities = 89/341 (26%), Positives = 157/341 (46%)
Query: 222 KIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVN---EPTGDILVFLTGQDEIERAEEI 278
K+ +YP + ++ + ++ +VT L +H++ EP G IL FL G EI+ ++
Sbjct: 629 KLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQR 687
Query: 279 LKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIK 338
L++ LG ++ +I P+++N+P Q IF+ P RK+VLATNIAETS+T++ I
Sbjct: 688 LQE---ALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIV 744
Query: 339 YVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIW 398
+V+ G K + Y+ KT + L +S+A+ QR G + R G + L+ ++
Sbjct: 745 HVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMV 804
Query: 399 M----TILCQKYNELIWKM-LSLFSNVLVNF--DFIDPPXXXXXXXXXXXXXXXGALNKA 451
IL L+ + + + V F +D P G L++
Sbjct: 805 PFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQR 864
Query: 452 GQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYAD 511
LT +G+++A DP+L+K IV ++C ++ + + L F + D
Sbjct: 865 EYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPFSSSLQNRAEVD 922
Query: 512 NARMNFHLGDVGDRIALLRVYNCWREC-NYSTEWCRENYIQ 551
+ D +A +R W E + RENY++
Sbjct: 923 KVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLE 963
Score = 270 (100.1 bits), Expect = 2.7e-45, Sum P(2) = 2.7e-45
Identities = 63/155 (40%), Positives = 89/155 (57%)
Query: 81 PVLAIVGETGSGKTTQIPQYLYEPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSD 140
P L + G+ + + +PR ++A+SVA RVS E+G L VG+ +R E
Sbjct: 468 PQLLLERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPA 527
Query: 141 KT-VLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKL 199
+ L + T +LLR++ PSLE S +IVDE ER ++TD L LLK L P L+L
Sbjct: 528 RGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRL 587
Query: 200 LISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFY 234
++ SAT D E+FS YFG P+ K+PG YPV+ Y
Sbjct: 588 VLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHY 622
Score = 116 (45.9 bits), Expect = 3.9e-29, Sum P(2) = 3.9e-29
Identities = 32/85 (37%), Positives = 49/85 (57%)
Query: 59 EERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYEPRWV-----AAMSVA 113
+E LP+ P + +L A+ +PV+ I G+TG GKTT+IPQ L E R+V A +V
Sbjct: 429 QEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLE-RYVTEGRGARCNVI 487
Query: 114 A----RVSQ-EMGVKLGHEVGYSIR 133
R+S + ++ HE+G S+R
Sbjct: 488 ITQPRRISAVSVAQRVSHELGPSLR 512
>UNIPROTKB|Q2NKY8 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:BC111349
IPI:IPI00717186 RefSeq:NP_001070003.1 UniGene:Bt.24588
ProteinModelPortal:Q2NKY8 SMR:Q2NKY8 PRIDE:Q2NKY8 GeneID:767607
KEGG:bta:767607 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
InParanoid:Q2NKY8 KO:K13185 OrthoDB:EOG4VHK5M NextBio:20918019
Uniprot:Q2NKY8
Length = 1220
Score = 294 (108.6 bits), Expect = 2.7e-45, Sum P(2) = 2.7e-45
Identities = 90/341 (26%), Positives = 158/341 (46%)
Query: 222 KIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVN---EPTGDILVFLTGQDEIERAEEI 278
K+ +YP + ++ + ++ +VT L +H++ EP G IL FL G EI+ ++
Sbjct: 655 KLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQR 713
Query: 279 LKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIK 338
L++ LG ++ +I P+++N+P Q IF+ P RK+VLATNIAETS+TI+ I
Sbjct: 714 LQE---ALGMHESKYLILPVHSNIPMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIV 770
Query: 339 YVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIW 398
+V+ G K + Y+ KT + L +S+A+ QR G + R G + L+ ++
Sbjct: 771 HVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMA 830
Query: 399 M----TILCQKYNELIWKM-LSLFSNVLVNF--DFIDPPXXXXXXXXXXXXXXXGALNKA 451
IL L+ + + + V F +D P G L++
Sbjct: 831 PFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQR 890
Query: 452 GQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYAD 511
LT +G+++A DP+L+K IV ++C ++ + + L F + D
Sbjct: 891 EYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPFSSSLQNRAEVD 948
Query: 512 NARMNFHLGDVGDRIALLRVYNCWREC-NYSTEWCRENYIQ 551
+ D +A +R + W E + RENY++
Sbjct: 949 KVKALLSHDSGSDHLAFVRAVSGWEEVLRWQDRSSRENYLE 989
Score = 267 (99.0 bits), Expect = 2.7e-45, Sum P(2) = 2.7e-45
Identities = 62/155 (40%), Positives = 89/155 (57%)
Query: 81 PVLAIVGETGSGKTTQIPQYLYEPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSD 140
P L + G+ + + +PR ++A+SVA RVS E+G L VG+ +R E
Sbjct: 494 PQLLLERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPTLRRNVGFQVRLESKPPA 553
Query: 141 KT-VLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKL 199
+ L + T +LLR++ PSLE S ++VDE ER ++TD L LLK L P L+L
Sbjct: 554 RGGALLFCTVGILLRKLQSNPSLEGVSHVVVDEEHERDVNTDFLLILLKGLQRLNPALRL 613
Query: 200 LISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFY 234
++ SAT D E+FS YFG P+ K+PG YPV+ Y
Sbjct: 614 VLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHY 648
Score = 115 (45.5 bits), Expect = 2.4e-29, Sum P(2) = 2.4e-29
Identities = 31/85 (36%), Positives = 49/85 (57%)
Query: 59 EERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYEPRWV-----AAMSVA 113
+E LP+ P + +L A+ +PV+ I G+TG GKTT+IPQ L E R+V A +V
Sbjct: 455 QEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLE-RYVTEGRGARCNVI 513
Query: 114 A----RVSQ-EMGVKLGHEVGYSIR 133
R+S + ++ HE+G ++R
Sbjct: 514 ITQPRRISAVSVAQRVSHELGPTLR 538
>MGI|MGI:1920081 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 MGI:MGI:1920081 GO:GO:0005524
GO:GO:0003682 GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OMA:LHKEERY EMBL:AB047557 EMBL:AK146326 EMBL:AK148778
EMBL:AK153969 EMBL:BC004082 EMBL:BC016202 IPI:IPI00127902
IPI:IPI00270064 IPI:IPI00761204 RefSeq:NP_001239611.1
RefSeq:NP_001239612.1 RefSeq:NP_579925.1 UniGene:Mm.276305
ProteinModelPortal:Q99PU8 SMR:Q99PU8 PhosphoSite:Q99PU8
PaxDb:Q99PU8 PRIDE:Q99PU8 Ensembl:ENSMUST00000035056
Ensembl:ENSMUST00000062368 Ensembl:ENSMUST00000111991
Ensembl:ENSMUST00000136969 Ensembl:ENSMUST00000142911
Ensembl:ENSMUST00000148287 Ensembl:ENSMUST00000165596 GeneID:72831
KEGG:mmu:72831 UCSC:uc009rtg.1 UCSC:uc009rth.1 UCSC:uc009rti.1
ChiTaRS:DHX30 NextBio:337009 Bgee:Q99PU8 CleanEx:MM_DHX30
Genevestigator:Q99PU8 GermOnline:ENSMUSG00000032480 Uniprot:Q99PU8
Length = 1217
Score = 291 (107.5 bits), Expect = 2.9e-45, Sum P(2) = 2.9e-45
Identities = 89/341 (26%), Positives = 157/341 (46%)
Query: 222 KIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVN---EPTGDILVFLTGQDEIERAEEI 278
K+ +YP + ++ + ++ +VT L +H++ EP G IL FL G EI+ ++
Sbjct: 652 KLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQR 710
Query: 279 LKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIK 338
L++ LG ++ +I P+++N+P Q IF+ P RK+VLATNIAETS+T++ I
Sbjct: 711 LQE---ALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIV 767
Query: 339 YVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIW 398
+V+ G K + Y+ KT + L +S+A+ QR G + R G + L+ ++
Sbjct: 768 HVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMV 827
Query: 399 M----TILCQKYNELIWKM-LSLFSNVLVNF--DFIDPPXXXXXXXXXXXXXXXGALNKA 451
IL L+ + + + V F +D P G L++
Sbjct: 828 PFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQR 887
Query: 452 GQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYAD 511
LT +G+++A DP+L+K IV ++C ++ + + L F + D
Sbjct: 888 EYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPFSSSLQNRAEVD 945
Query: 512 NARMNFHLGDVGDRIALLRVYNCWREC-NYSTEWCRENYIQ 551
+ D +A +R W E + RENY++
Sbjct: 946 KVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLE 986
Score = 270 (100.1 bits), Expect = 2.9e-45, Sum P(2) = 2.9e-45
Identities = 63/155 (40%), Positives = 89/155 (57%)
Query: 81 PVLAIVGETGSGKTTQIPQYLYEPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSD 140
P L + G+ + + +PR ++A+SVA RVS E+G L VG+ +R E
Sbjct: 491 PQLLLERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPA 550
Query: 141 KT-VLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKL 199
+ L + T +LLR++ PSLE S +IVDE ER ++TD L LLK L P L+L
Sbjct: 551 RGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRL 610
Query: 200 LISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFY 234
++ SAT D E+FS YFG P+ K+PG YPV+ Y
Sbjct: 611 VLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHY 645
Score = 116 (45.9 bits), Expect = 4.1e-29, Sum P(2) = 4.1e-29
Identities = 32/85 (37%), Positives = 49/85 (57%)
Query: 59 EERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYEPRWV-----AAMSVA 113
+E LP+ P + +L A+ +PV+ I G+TG GKTT+IPQ L E R+V A +V
Sbjct: 452 QEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLE-RYVTEGRGARCNVI 510
Query: 114 A----RVSQ-EMGVKLGHEVGYSIR 133
R+S + ++ HE+G S+R
Sbjct: 511 ITQPRRISAVSVAQRVSHELGPSLR 535
>UNIPROTKB|D4A1V3 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676 GO:GO:0042645
EMBL:CH473954 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:LHKEERY
UniGene:Rn.163034 IPI:IPI00203041 Ensembl:ENSRNOT00000045878
Uniprot:D4A1V3
Length = 1222
Score = 291 (107.5 bits), Expect = 2.9e-45, Sum P(2) = 2.9e-45
Identities = 89/341 (26%), Positives = 157/341 (46%)
Query: 222 KIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVN---EPTGDILVFLTGQDEIERAEEI 278
K+ +YP + ++ + ++ +VT L +H++ EP G IL FL G EI+ ++
Sbjct: 657 KLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQR 715
Query: 279 LKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIK 338
L++ LG ++ +I P+++N+P Q IF+ P RK+VLATNIAETS+T++ I
Sbjct: 716 LQE---ALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIV 772
Query: 339 YVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIW 398
+V+ G K + Y+ KT + L +S+A+ QR G + R G + L+ ++
Sbjct: 773 HVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMV 832
Query: 399 M----TILCQKYNELIWKM-LSLFSNVLVNF--DFIDPPXXXXXXXXXXXXXXXGALNKA 451
IL L+ + + + V F +D P G L++
Sbjct: 833 PFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQR 892
Query: 452 GQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYAD 511
LT +G+++A DP+L+K IV ++C ++ + + L F + D
Sbjct: 893 EYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT--RDPFSSSLQNRAEVD 950
Query: 512 NARMNFHLGDVGDRIALLRVYNCWREC-NYSTEWCRENYIQ 551
+ D +A +R W E + RENY++
Sbjct: 951 KVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLE 991
Score = 270 (100.1 bits), Expect = 2.9e-45, Sum P(2) = 2.9e-45
Identities = 63/155 (40%), Positives = 89/155 (57%)
Query: 81 PVLAIVGETGSGKTTQIPQYLYEPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSD 140
P L + G+ + + +PR ++A+SVA RVS E+G L VG+ +R E
Sbjct: 496 PQLLLERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPA 555
Query: 141 KT-VLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKL 199
+ L + T +LLR++ PSLE S +IVDE ER ++TD L LLK L P L+L
Sbjct: 556 RGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRL 615
Query: 200 LISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFY 234
++ SAT D E+FS YFG P+ K+PG YPV+ Y
Sbjct: 616 VLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHY 650
Score = 116 (45.9 bits), Expect = 4.2e-29, Sum P(2) = 4.2e-29
Identities = 32/85 (37%), Positives = 49/85 (57%)
Query: 59 EERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYEPRWV-----AAMSVA 113
+E LP+ P + +L A+ +PV+ I G+TG GKTT+IPQ L E R+V A +V
Sbjct: 457 QEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLE-RYVTEGRGARCNVI 515
Query: 114 A----RVSQ-EMGVKLGHEVGYSIR 133
R+S + ++ HE+G S+R
Sbjct: 516 ITQPRRISAVSVAQRVSHELGPSLR 540
>UNIPROTKB|E2QZR7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 OMA:RAFWESS
EMBL:AAEX03007702 Ensembl:ENSCAFT00000000357 Uniprot:E2QZR7
Length = 1376
Score = 318 (117.0 bits), Expect = 3.0e-45, Sum P(2) = 3.0e-45
Identities = 93/320 (29%), Positives = 152/320 (47%)
Query: 262 ILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKV 321
IL+FL G DEI + + + + +++N+ T Q K+ + P RK+
Sbjct: 625 ILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 684
Query: 322 VLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTG 381
+L+TNIAETS+T++ + +VI G K KS++ + L + ISKASA QR G + R
Sbjct: 685 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAVQRKGRAGRCR 744
Query: 382 PGKCFRLYTLHNYHRIWMTILCQKYNELIWKMLSLFSNVL--VNF---DFI----DPPXX 432
PG CFRL++ + + + + + + L L + +L VN DF+ +PP
Sbjct: 745 PGICFRLFSRLRFQNM-LEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAPEPPPA 803
Query: 433 XXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAM 492
A++ LT +G +A+ P++P L K ++ KC D I+TIA
Sbjct: 804 LIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACT 863
Query: 493 LFVGNSIFYRPKDKQIYADN-ARMNFHLGDVGDRIALLRVYNCWRECNYSTEW----CRE 547
L + + Q A R F G D +ALLR + W++ S W C +
Sbjct: 864 LAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKAR-SDGWERAFCEK 922
Query: 548 NYIQVSSMKRARDIRDQLEG 567
N++ ++M+ +R QL G
Sbjct: 923 NFLSQATMEIIIGMRTQLLG 942
Score = 242 (90.2 bits), Expect = 3.0e-45, Sum P(2) = 3.0e-45
Identities = 67/200 (33%), Positives = 107/200 (53%)
Query: 37 FDEFESELPNKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQ 96
FD F LP + +++++E + L + E + P + +G +
Sbjct: 185 FDSFRQSLPVFEKQEEIVKIIKENKVVLIV---GETGSGKTTQIPQFLLDDCFKNGIPCR 241
Query: 97 IPQYLYEPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDC-TSDKTVLKYMTDCMLLRE 155
I + +PR +AA++VA RV+ E ++G +GY IR E S KT+L + T+ +LLR
Sbjct: 242 I--FCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRRVSPKTLLTFCTNGVLLRT 299
Query: 156 IVI-EPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDY 214
++ + +L + + +IVDE ER +D L L+DL+ P LKL++SSA LD F Y
Sbjct: 300 LMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRY 359
Query: 215 FGSAPIFKIPGRRYPV-ELF 233
FGS P+ I GR + V E+F
Sbjct: 360 FGSCPVIYIQGRPFEVKEMF 379
>UNIPROTKB|H7BXY3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HGNC:HGNC:16716 EMBL:AC139667 EMBL:AC026318
ProteinModelPortal:H7BXY3 SMR:H7BXY3 PRIDE:H7BXY3
Ensembl:ENST00000348968 Bgee:H7BXY3 Uniprot:H7BXY3
Length = 1166
Score = 287 (106.1 bits), Expect = 4.4e-45, Sum P(2) = 4.4e-45
Identities = 87/320 (27%), Positives = 148/320 (46%)
Query: 243 IEAAIVTALQIHVN---EPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIY 299
++ +VT L +H++ EP G IL FL G EI+ ++ L++ LG ++ +I P++
Sbjct: 622 LDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQRLQE---ALGMHESKYLILPVH 677
Query: 300 ANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMES 359
+N+P Q IF+ P RK+VLATNIAETS+TI+ I +V+ G K + Y+ KT +
Sbjct: 678 SNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSC 737
Query: 360 LLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIWM----TILCQKYNELIWKM-L 414
L +S+A+ QR G + R G + L+ ++ IL L+ + +
Sbjct: 738 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKI 797
Query: 415 SLFSNVLVNF--DFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSK 472
+ V F +D P G L++ LT +G+++A DP+L+K
Sbjct: 798 HMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAK 857
Query: 473 TIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVY 532
IV ++C ++ + + L F + D + D +A +R
Sbjct: 858 AIVLAAIFRCLHPLLVVVSCLT--RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAV 915
Query: 533 NCWREC-NYSTEWCRENYIQ 551
W E + RENY++
Sbjct: 916 AGWEEVLRWQDRSSRENYLE 935
Score = 272 (100.8 bits), Expect = 4.4e-45, Sum P(2) = 4.4e-45
Identities = 63/155 (40%), Positives = 89/155 (57%)
Query: 81 PVLAIVGETGSGKTTQIPQYLYEPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSD 140
P L + G+ + + +PR ++A+SVA RVS E+G L VG+ +R E
Sbjct: 440 PQLLLERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPS 499
Query: 141 KT-VLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKL 199
+ L + T +LLR++ PSLE S +IVDE ER ++TD L LLK L P L+L
Sbjct: 500 RGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRL 559
Query: 200 LISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFY 234
++ SAT D E+FS YFG P+ K+PG YPV+ Y
Sbjct: 560 VLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHY 594
Score = 116 (45.9 bits), Expect = 1.0e-28, Sum P(2) = 1.0e-28
Identities = 32/85 (37%), Positives = 49/85 (57%)
Query: 59 EERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYEPRWV-----AAMSVA 113
+E LP+ P + +L A+ +PV+ I G+TG GKTT+IPQ L E R+V A +V
Sbjct: 401 QEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLE-RYVTEGRGARCNVI 459
Query: 114 A----RVSQ-EMGVKLGHEVGYSIR 133
R+S + ++ HE+G S+R
Sbjct: 460 ITQPRRISAVSVAQRVSHELGPSLR 484
>UNIPROTKB|Q7L2E3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0042645 "mitochondrial nucleoid" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AB020697 EMBL:AK002076
EMBL:AK291266 EMBL:BC014237 EMBL:BC015029 EMBL:BC020126
EMBL:BC038417 IPI:IPI00411733 IPI:IPI00926109 IPI:IPI00927809
PIR:E56236 RefSeq:NP_055781.2 RefSeq:NP_619520.1 UniGene:Hs.517948
PDB:2DB2 PDBsum:2DB2 ProteinModelPortal:Q7L2E3 SMR:Q7L2E3
IntAct:Q7L2E3 MINT:MINT-1186537 STRING:Q7L2E3 PhosphoSite:Q7L2E3
DMDM:74758997 PaxDb:Q7L2E3 PRIDE:Q7L2E3 DNASU:22907
Ensembl:ENST00000445061 Ensembl:ENST00000446256
Ensembl:ENST00000457607 GeneID:22907 KEGG:hsa:22907 UCSC:uc003crt.3
UCSC:uc003cru.3 GeneCards:GC03P047844 HGNC:HGNC:16716 HPA:HPA034806
neXtProt:NX_Q7L2E3 PharmGKB:PA27217 InParanoid:Q7L2E3 OMA:LHKEERY
PhylomeDB:Q7L2E3 EvolutionaryTrace:Q7L2E3 GenomeRNAi:22907
NextBio:43571 ArrayExpress:Q7L2E3 Bgee:Q7L2E3 CleanEx:HS_DHX30
Genevestigator:Q7L2E3 Uniprot:Q7L2E3
Length = 1194
Score = 287 (106.1 bits), Expect = 4.7e-45, Sum P(2) = 4.7e-45
Identities = 87/320 (27%), Positives = 148/320 (46%)
Query: 243 IEAAIVTALQIHVN---EPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIY 299
++ +VT L +H++ EP G IL FL G EI+ ++ L++ LG ++ +I P++
Sbjct: 650 LDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQRLQE---ALGMHESKYLILPVH 705
Query: 300 ANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMES 359
+N+P Q IF+ P RK+VLATNIAETS+TI+ I +V+ G K + Y+ KT +
Sbjct: 706 SNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSC 765
Query: 360 LLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIWM----TILCQKYNELIWKM-L 414
L +S+A+ QR G + R G + L+ ++ IL L+ + +
Sbjct: 766 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKI 825
Query: 415 SLFSNVLVNF--DFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSK 472
+ V F +D P G L++ LT +G+++A DP+L+K
Sbjct: 826 HMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAK 885
Query: 473 TIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVY 532
IV ++C ++ + + L F + D + D +A +R
Sbjct: 886 AIVLAAIFRCLHPLLVVVSCLT--RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAV 943
Query: 533 NCWREC-NYSTEWCRENYIQ 551
W E + RENY++
Sbjct: 944 AGWEEVLRWQDRSSRENYLE 963
Score = 272 (100.8 bits), Expect = 4.7e-45, Sum P(2) = 4.7e-45
Identities = 63/155 (40%), Positives = 89/155 (57%)
Query: 81 PVLAIVGETGSGKTTQIPQYLYEPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSD 140
P L + G+ + + +PR ++A+SVA RVS E+G L VG+ +R E
Sbjct: 468 PQLLLERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPS 527
Query: 141 KT-VLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKL 199
+ L + T +LLR++ PSLE S +IVDE ER ++TD L LLK L P L+L
Sbjct: 528 RGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRL 587
Query: 200 LISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFY 234
++ SAT D E+FS YFG P+ K+PG YPV+ Y
Sbjct: 588 VLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHY 622
Score = 116 (45.9 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 32/85 (37%), Positives = 49/85 (57%)
Query: 59 EERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYEPRWV-----AAMSVA 113
+E LP+ P + +L A+ +PV+ I G+TG GKTT+IPQ L E R+V A +V
Sbjct: 429 QEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLE-RYVTEGRGARCNVI 487
Query: 114 A----RVSQ-EMGVKLGHEVGYSIR 133
R+S + ++ HE+G S+R
Sbjct: 488 ITQPRRISAVSVAQRVSHELGPSLR 512
>UNIPROTKB|J9P264 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047330
Uniprot:J9P264
Length = 1219
Score = 286 (105.7 bits), Expect = 6.5e-45, Sum P(2) = 6.5e-45
Identities = 86/320 (26%), Positives = 148/320 (46%)
Query: 243 IEAAIVTALQIHVN---EPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIY 299
++ +VT L +H++ EP G IL FL G EI+ ++ L++ LG ++ +I P++
Sbjct: 681 LDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQRLQE---ALGMHESKYLILPVH 736
Query: 300 ANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMES 359
+N+P Q IF+ P RK+VLATNIAETS+T++ I +V+ G K + Y+ KT +
Sbjct: 737 SNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSC 796
Query: 360 LLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIWM----TILCQKYNELIWKM-L 414
L +S+A+ QR G + R G + L+ ++ IL L+ + +
Sbjct: 797 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKI 856
Query: 415 SLFSNVLVNF--DFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSK 472
+ V F +D P G L++ LT +G+++A DP+L+K
Sbjct: 857 HMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAK 916
Query: 473 TIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVY 532
IV ++C ++ + + L F + D + D +A +R
Sbjct: 917 AIVLAAIFRCLHPLLVVVSCLT--RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAV 974
Query: 533 NCWREC-NYSTEWCRENYIQ 551
W E + RENY++
Sbjct: 975 AGWEEVLRWQDRSSRENYLE 994
Score = 272 (100.8 bits), Expect = 6.5e-45, Sum P(2) = 6.5e-45
Identities = 63/155 (40%), Positives = 89/155 (57%)
Query: 81 PVLAIVGETGSGKTTQIPQYLYEPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSD 140
P L + G+ + + +PR ++A+SVA RVS E+G L VG+ +R E
Sbjct: 496 PQLLLERYVSEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPA 555
Query: 141 KT-VLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKL 199
+ L + T +LLR++ PSLE S +IVDE ER ++TD L LLK L P L+L
Sbjct: 556 RGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRL 615
Query: 200 LISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFY 234
++ SAT D E+FS YFG P+ K+PG YPV+ Y
Sbjct: 616 VLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHY 650
Score = 116 (45.9 bits), Expect = 1.5e-28, Sum P(2) = 1.5e-28
Identities = 30/85 (35%), Positives = 49/85 (57%)
Query: 59 EERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYEPRWVAA--------- 109
+E LP+ P + +L A+ +PV+ I G+TG GKTT+IPQ L E R+V+
Sbjct: 457 QEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLE-RYVSEGRGARCNVI 515
Query: 110 MSVAARVSQ-EMGVKLGHEVGYSIR 133
++ R+S + ++ HE+G S+R
Sbjct: 516 ITQPRRISAVSVAQRVSHELGPSLR 540
>UNIPROTKB|Q5R607 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9601 "Pongo abelii" [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOVERGEN:HBG081437 KO:K13185 EMBL:CR858337 EMBL:CR860693
RefSeq:NP_001125306.1 UniGene:Pab.19257 ProteinModelPortal:Q5R607
SMR:Q5R607 PRIDE:Q5R607 GeneID:100172205 KEGG:pon:100172205
InParanoid:Q5R607 Uniprot:Q5R607
Length = 1194
Score = 280 (103.6 bits), Expect = 4.7e-44, Sum P(2) = 4.7e-44
Identities = 86/320 (26%), Positives = 147/320 (45%)
Query: 243 IEAAIVTALQIHVN---EPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIY 299
++ +VT L +H++ EP G IL FL G EI+ ++ L++ LG ++ +I P++
Sbjct: 650 LDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQRLQE---ALGMHESKYLILPVH 705
Query: 300 ANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMES 359
+N+P Q IF+ P RK+VLATNIAETS TI+ I +V+ G K + Y+ KT +
Sbjct: 706 SNIPMMDQKAIFQQPPVGVRKIVLATNIAETSTTINDIVHVVDSGLHKEERYDLKTKVSC 765
Query: 360 LLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIWM----TILCQKYNELIWKM-L 414
L +S+A+ QR G + R G + L+ ++ IL L+ + +
Sbjct: 766 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKI 825
Query: 415 SLFSNVLVNF--DFIDPPXXXXXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSK 472
+ V F +D P G L++ LT +G+++A +P+L+K
Sbjct: 826 HMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTEPRLAK 885
Query: 473 TIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVY 532
IV ++C ++ + + L F + D + D +A +R
Sbjct: 886 AIVLAAIFRCLHPLLVVVSCLT--RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAV 943
Query: 533 NCWREC-NYSTEWCRENYIQ 551
W E + RENY++
Sbjct: 944 AGWEEVLRWQDRSSRENYLE 963
Score = 270 (100.1 bits), Expect = 4.7e-44, Sum P(2) = 4.7e-44
Identities = 63/155 (40%), Positives = 89/155 (57%)
Query: 81 PVLAIVGETGSGKTTQIPQYLYEPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSD 140
P L + G+ + + +PR ++A+SVA RVS E+G L VG+ +R E
Sbjct: 468 PQLLLERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPA 527
Query: 141 KT-VLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKL 199
+ L + T +LLR++ PSLE S +IVDE ER ++TD L LLK L P L+L
Sbjct: 528 RGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRL 587
Query: 200 LISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFY 234
++ SAT D E+FS YFG P+ K+PG YPV+ Y
Sbjct: 588 VLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHY 622
Score = 116 (45.9 bits), Expect = 6.7e-28, Sum P(2) = 6.7e-28
Identities = 32/85 (37%), Positives = 49/85 (57%)
Query: 59 EERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYEPRWV-----AAMSVA 113
+E LP+ P + +L A+ +PV+ I G+TG GKTT+IPQ L E R+V A +V
Sbjct: 429 QEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLE-RYVTEGRGARCNVI 487
Query: 114 A----RVSQ-EMGVKLGHEVGYSIR 133
R+S + ++ HE+G S+R
Sbjct: 488 ITQPRRISAVSVAQRVSHELGPSLR 512
>ASPGD|ASPL0000008624 [details] [associations]
symbol:AN5839 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GO:GO:0008026 OrthoDB:EOG4TXG12 RefSeq:XP_663443.1
EnsemblFungi:CADANIAT00007203 GeneID:2870747 KEGG:ani:AN5839.2
HOGENOM:HOG000213693 OMA:KNIRRAI Uniprot:Q5B0U1
Length = 1436
Score = 307 (113.1 bits), Expect = 6.6e-44, Sum P(3) = 6.6e-44
Identities = 93/317 (29%), Positives = 148/317 (46%)
Query: 262 ILVFLTGQDEIERA-EEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARK 320
ILVFL G EI R +E+L + T G II +++++ ++ Q K F P+ RK
Sbjct: 922 ILVFLPGMAEIRRLNDELLSEPTFQHGW-----IIHALHSSIASDEQEKAFVVPPDGMRK 976
Query: 321 VVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERT 380
+V+ATNIAET +TI I VI G K ++ + + L+ IS+A+A QR G + R
Sbjct: 977 IVIATNIAETGITIPDITAVIDAGKEKTMRFDERRQLSRLVEAFISRANAKQRRGRAGRV 1036
Query: 381 GPGKCFRLYTLHNYHRIWMT-----ILCQKYNELIW--KMLSLFSNVLVNFDFIDPPXXX 433
G CF ++T H + + +L +L+ K+ L + +DPP
Sbjct: 1037 QRGICFHMFTKHRHDNLLAEQQTPEMLRLSLQDLVLRVKICKLGEVEPTLLEALDPPSSK 1096
Query: 434 XXXXXXXXXXXXGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAML 493
AL LT +G+Q+A+ P+D L K I+ +KC D I+IAA+L
Sbjct: 1097 NIRRAIDALKEVKALTSTENLTPLGQQLAKLPLDVFLGKLIIHGAFFKCLDAAISIAAIL 1156
Query: 494 FVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYS---TEW--CREN 548
S F + R+ F GD D + + Y W+ + E+ CR+N
Sbjct: 1157 SC-KSPFVNTMGSNAQKEAVRLGFRRGD-SDLLTVYNAYCAWKRTRSTPGANEYAFCRKN 1214
Query: 549 YIQVSSMKRARDIRDQL 565
++ ++ D++ QL
Sbjct: 1215 FLSPQTLLNIEDVKLQL 1231
Score = 246 (91.7 bits), Expect = 6.6e-44, Sum P(3) = 6.6e-44
Identities = 62/170 (36%), Positives = 99/170 (58%)
Query: 81 PVLAIVGETGSGKTTQIPQYLYEPRWVAAMSVAARVSQEMGVK---LGHE---VGYSIRF 134
P + E SG+ +I Y+ EPR ++A+S+A RVS+E+G +G +G+++R
Sbjct: 679 PSFILEHEMLSGRPCKI--YVTEPRRISAISLARRVSEELGESKNDVGTSRSLIGFAVRL 736
Query: 135 EDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYR 194
E S T L + T +++R + + + +++DE ER++ +D L +L+ L+ R
Sbjct: 737 ESKVSPATRLVFATTGVVVRMLERPDDFQDITHVVLDEVHERSIDSDFLLIVLRRLMQKR 796
Query: 195 PDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIE 244
DLKL++ SAT+DA +FS Y G P+ IPGR +PVE TK E D IE
Sbjct: 797 QDLKLILMSATVDANRFSTYLGGVPVLNIPGRTFPVE---TKFLE-DAIE 842
Score = 128 (50.1 bits), Expect = 5.6e-32, Sum P(2) = 5.6e-32
Identities = 34/92 (36%), Positives = 53/92 (57%)
Query: 55 EMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQ--------------- 99
+ + + R LPI+ F E+L ++ + L I ETGSGK+TQIP
Sbjct: 636 QYMVQSRMQLPIWTFKNEILNTLNSHRALIICSETGSGKSTQIPSFILEHEMLSGRPCKI 695
Query: 100 YLYEPRWVAAMSVAARVSQEMGVKLGHEVGYS 131
Y+ EPR ++A+S+A RVS+E+G + ++VG S
Sbjct: 696 YVTEPRRISAISLARRVSEELG-ESKNDVGTS 726
Score = 41 (19.5 bits), Expect = 6.6e-44, Sum P(3) = 6.6e-44
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 36 NFDEFESELPNKSVVKSTLEMLQEERKT 63
N + + + +K VVKS +++QE T
Sbjct: 557 NAKKVQDDEADKQVVKSLRKLIQENHGT 584
Score = 39 (18.8 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 6/27 (22%), Positives = 15/27 (55%)
Query: 464 FPIDPKLSKTIVSLDKYKCSDEIITIA 490
FP++ K + + L +Y+ ++ +A
Sbjct: 830 FPVETKFLEDAIELTQYRTTENESNVA 856
WARNING: HSPs involving 64 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.403 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 582 567 0.00079 120 3 11 22 0.38 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 314
No. of states in DFA: 621 (66 KB)
Total size of DFA: 321 KB (2164 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 47.20u 0.12s 47.32t Elapsed: 00:00:02
Total cpu time: 47.28u 0.12s 47.40t Elapsed: 00:00:02
Start: Thu May 9 20:17:40 2013 End: Thu May 9 20:17:42 2013
WARNINGS ISSUED: 2