BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037717
(582 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O60231|DHX16_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Homo sapiens GN=DHX16 PE=1 SV=2
Length = 1041
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/577 (58%), Positives = 428/577 (74%), Gaps = 24/577 (4%)
Query: 20 EDKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSG 79
E++ ++F + GD E P S E +Q R++LP++PF EELL A++
Sbjct: 359 EEETIEFVRATQLQGDE----EPSAPPTSTQAQQKESIQAVRRSLPVFPFREELLAAIAN 414
Query: 80 YPVLAIVGETGSGKTTQIPQYLYE--------------PRWVAAMSVAARVSQEMGVKLG 125
+ VL I GETGSGKTTQIPQYL+E PR VAAMSVAARV++EMGVKLG
Sbjct: 415 HQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRRVAAMSVAARVAREMGVKLG 474
Query: 126 HEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFG 185
+EVGYSIRFEDCTS++TVL+YMTD MLLRE + EP L SYSV++VDEA ERTL TD LFG
Sbjct: 475 NEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFG 534
Query: 186 LLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEA 245
L+KD+ +RP+LK+L++SAT+D +FS +F AP+F+IPGRR+PV++FYTKAPE DY+EA
Sbjct: 535 LIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEA 594
Query: 246 AIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTE 305
+V+ LQIHV +P GDILVFLTGQ+EIE A E+L+ R R LG+KI EL++ PIYANLP++
Sbjct: 595 CVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSD 654
Query: 306 LQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPI 365
+QA+IF+PTP ARKVV+ATNIAETSLTI+GI YV+ PGF K KSYNP+TGMESL V P
Sbjct: 655 MQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPC 714
Query: 366 SKASANQRTGLSERTGPGKCFRLYTLHNY-HRIWMTILCQ----KYNELIWKMLSLFSNV 420
SKASANQR G + R GKCFRLYT Y H + T + + ++ + SL +
Sbjct: 715 SKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHD 774
Query: 421 LVNFDFIDPPLEEALLKAFELLYALGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKY 480
L++FDF+DPP E LL A E LYALGALN G+LT GR+MAE P+DP LSK I++ +KY
Sbjct: 775 LMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKY 834
Query: 481 KCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNY 540
CS+EI+T+AAML V NSIFYRPKDK ++ADNAR+NF L GD + LL VY W E Y
Sbjct: 835 SCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPG-GDHLVLLNVYTQWAESGY 893
Query: 541 STEWCRENYIQVSSMKRARDIRDQLEGLFARVEIDTS 577
S++WC EN++Q SM+RARD+R+QLEGL RVE+ S
Sbjct: 894 SSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLS 930
>sp|Q7YR39|DHX16_PANTR Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Pan troglodytes GN=DHX16 PE=3 SV=1
Length = 1044
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/577 (58%), Positives = 428/577 (74%), Gaps = 24/577 (4%)
Query: 20 EDKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSG 79
E++ ++F + G+ E P S E +Q R++LP++PF EELL A++
Sbjct: 362 EEETIEFVRATQLQGNE----EPSAPPTSTQAQQKESIQAVRRSLPVFPFREELLAAIAN 417
Query: 80 YPVLAIVGETGSGKTTQIPQYLYE--------------PRWVAAMSVAARVSQEMGVKLG 125
+ VL I GETGSGKTTQIPQYL+E PR VAAMSVAARV++EMGVKLG
Sbjct: 418 HQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRRVAAMSVAARVAREMGVKLG 477
Query: 126 HEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFG 185
+EVGYSIRFEDCTS++TVL+YMTD MLLRE + EP L SYSV++VDEA ERTL TD LFG
Sbjct: 478 NEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFG 537
Query: 186 LLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEA 245
L+KD+ +RP+LK+L++SAT+D +FS +F AP+F+IPGRR+PV++FYTKAPE DY+EA
Sbjct: 538 LIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEA 597
Query: 246 AIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTE 305
+V+ LQIHV +P GDILVFLTGQ+EIE A E+L+ R R LG+KI EL++ PIYANLP++
Sbjct: 598 CVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSD 657
Query: 306 LQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPI 365
+QA+IF+PTP ARKVV+ATNIAETSLTI+GI YV+ PGF K KSYNP+TGMESL V P
Sbjct: 658 MQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPC 717
Query: 366 SKASANQRTGLSERTGPGKCFRLYTLHNY-HRIWMTILCQ----KYNELIWKMLSLFSNV 420
SKASANQR G + R GKCFRLYT Y H + T + + ++ + SL +
Sbjct: 718 SKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHD 777
Query: 421 LVNFDFIDPPLEEALLKAFELLYALGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKY 480
L++FDF+DPP E LL A E LYALGALN G+LT GR+MAE P+DP LSK I++ +KY
Sbjct: 778 LMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKY 837
Query: 481 KCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNY 540
CS+EI+T+AAML V NSIFYRPKDK ++ADNAR+NF L GD + LL VY W E Y
Sbjct: 838 SCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPG-GDHLVLLNVYTQWAESGY 896
Query: 541 STEWCRENYIQVSSMKRARDIRDQLEGLFARVEIDTS 577
S++WC EN++Q SM+RARD+R+QLEGL RVE+ S
Sbjct: 897 SSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLS 933
>sp|Q767K6|DHX16_PIG Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Sus scrofa GN=DHX16 PE=3 SV=1
Length = 1045
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/577 (58%), Positives = 427/577 (74%), Gaps = 24/577 (4%)
Query: 20 EDKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSG 79
E++ ++F + GD E P E +Q R++LP++PF EELL AV+
Sbjct: 363 EEETIEFVRATQLQGDE----EPAAPPAPTQAQQKESIQAVRRSLPVFPFREELLAAVAN 418
Query: 80 YPVLAIVGETGSGKTTQIPQYLYE--------------PRWVAAMSVAARVSQEMGVKLG 125
+ +L I GETGSGKTTQIPQYL+E PR VAAMSVAARV++EMGVKLG
Sbjct: 419 HQILIIEGETGSGKTTQIPQYLFEEGYTQKGMKIACTQPRRVAAMSVAARVAREMGVKLG 478
Query: 126 HEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFG 185
+EVGYSIRFEDCTS++TVL+YMTD MLLRE + EP L SYSV++VDEA ERTL TD LFG
Sbjct: 479 NEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFG 538
Query: 186 LLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEA 245
L+KD+ +RP+LK+L++SATLD +FS +F AP+F+IPGRR+PV++FYTKAPE DY+EA
Sbjct: 539 LIKDVARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEA 598
Query: 246 AIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTE 305
+V+ LQIHV +P GDILVFLTGQ+EIE A E+L+ R R LG+KI EL++ PIYANLP++
Sbjct: 599 CVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSD 658
Query: 306 LQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPI 365
+QA+IF+PTP ARKVV+ATNIAETSLTI+GI YV+ PGF K KSYNP+TGMESL V P
Sbjct: 659 MQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPC 718
Query: 366 SKASANQRTGLSERTGPGKCFRLYTLHNY-HRIWMTILCQ----KYNELIWKMLSLFSNV 420
SKASANQR G + R GKCFRLYT Y H + T + + ++ + SL +
Sbjct: 719 SKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHD 778
Query: 421 LVNFDFIDPPLEEALLKAFELLYALGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKY 480
L++FDF+DPP E LL A E LYALGALN G+LT GR+MAE P+DP LSK I++ +KY
Sbjct: 779 LMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKY 838
Query: 481 KCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNY 540
CS+EI+T+AAML V NSIFYRPKDK ++ADNAR+NF L GD + LL VY W E Y
Sbjct: 839 SCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPG-GDHLVLLNVYTQWAESGY 897
Query: 541 STEWCRENYIQVSSMKRARDIRDQLEGLFARVEIDTS 577
S++WC EN++Q SM+RARD+R+QLEGL RVE+ S
Sbjct: 898 SSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLS 934
>sp|Q54MH3|DHX16_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Dictyostelium discoideum GN=dhx16 PE=3 SV=1
Length = 1106
Score = 673 bits (1737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/537 (63%), Positives = 410/537 (76%), Gaps = 21/537 (3%)
Query: 57 LQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------------- 103
+QE RK+LP+YP+ E+L+ AV Y VL IVGETGSGKTTQIPQYL+E
Sbjct: 460 IQEVRKSLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHEAGFSKTGKIGCTQ 519
Query: 104 PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLE 163
PR VAAMSVAARV++E+G KLG+EVGYSIRFEDCTS KTVL+YMTD ML+RE + P L
Sbjct: 520 PRRVAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTSQKTVLQYMTDGMLVREFLTAPDLA 579
Query: 164 SYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKI 223
SYSVLI+DEA ERTL TD LFGLLKD+ +RPDLKLLISSAT+DAE+FSDYF AP F I
Sbjct: 580 SYSVLIIDEAHERTLHTDILFGLLKDITRFRPDLKLLISSATMDAERFSDYFDGAPTFNI 639
Query: 224 PGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRT 283
PGR+Y V YT+APE DY++AA+VT LQIH+ EP GDILVFLTGQ+E+++A E+L+ RT
Sbjct: 640 PGRKYEVTTHYTQAPEADYLDAAVVTVLQIHITEPLGDILVFLTGQEEVDQAAEMLQTRT 699
Query: 284 RGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHP 343
RGLGTKI ELII IY+ LPT+LQAKIFEPTP ARKVVLATNIAETSLTIDGI YVI P
Sbjct: 700 RGLGTKIKELIITRIYSTLPTDLQAKIFEPTPPNARKVVLATNIAETSLTIDGIIYVIDP 759
Query: 344 GFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNY-----HRIW 398
GF K K +NP+TGMESL++ P+S+ASANQR G + R PGKCFRL+T +
Sbjct: 760 GFCKQKMFNPRTGMESLVITPVSRASANQRKGRAGRVAPGKCFRLFTAWAFDNELEENTI 819
Query: 399 MTILCQKYNELIWKMLSLFSNVLVNFDFIDPPLEEALLKAFELLYALGALNKAGQLTRVG 458
I ++ + S+ N L+NFDF+DPP + L+ A E LYALGALN GQLT++G
Sbjct: 820 PEIQRTNLGNVVLLLKSMGINDLMNFDFMDPPPAQTLIAALEQLYALGALNDRGQLTKLG 879
Query: 459 RQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNAR-MNF 517
R+MAEFP+DP+LSK I++ +KYKCS+EI+TI AML VGN+IFYRPKDK AD AR + F
Sbjct: 880 RKMAEFPVDPQLSKMIIASEKYKCSEEILTICAMLSVGNTIFYRPKDKAFAADAARKLFF 939
Query: 518 HLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVEI 574
H GD + L+ V+N WRE Y+ +WC EN+IQ SMKRA+D+RDQLE L RVEI
Sbjct: 940 H--PQGDHLTLMNVFNQWRESGYAVQWCFENFIQHRSMKRAQDVRDQLELLLERVEI 994
>sp|O45244|DHX16_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4
OS=Caenorhabditis elegans GN=mog-4 PE=1 SV=2
Length = 1008
Score = 662 bits (1709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/587 (57%), Positives = 433/587 (73%), Gaps = 28/587 (4%)
Query: 11 QREKCTFEIE-DKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTLPIYPF 69
+R++ FE+ D+ VDF G N + E+E K + ++E RK+LP+Y F
Sbjct: 316 KRKEQEFELLLDEKVDFIQALQMPGTNEEVVETEAEKKKMS------IEETRKSLPVYAF 369
Query: 70 WEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE--------------PRWVAAMSVAAR 115
+ ++AV + VL I GETGSGKTTQ+PQYLYE PR VAAMSVAAR
Sbjct: 370 RDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIGCTQPRRVAAMSVAAR 429
Query: 116 VSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQE 175
V+ E+G KLG +VGYSIRFEDCTS+KTVLKYMTD MLLRE + EP L SYSV+++DEA E
Sbjct: 430 VADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEPDLASYSVMMIDEAHE 489
Query: 176 RTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFYT 235
RTL TD LFGL+KD+ +R DLKLLISSATLDAEKFS +F APIF+IPGRR+PV+++YT
Sbjct: 490 RTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDAPIFRIPGRRFPVDIYYT 549
Query: 236 KAPEVDYIEAAIVTALQIHVNEP-TGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELI 294
+APE DY++AAIVT +QIH+ +P GDILVFLTGQ+EIE +E L +R++ LG+KI ELI
Sbjct: 550 QAPEADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEIETVQEALMERSKALGSKIKELI 609
Query: 295 ICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPK 354
P+YANLP++LQAKIFEPTP+ ARKVVLATNIAETS+TIDGI YVI PGF+K S++ +
Sbjct: 610 PLPVYANLPSDLQAKIFEPTPKDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDAR 669
Query: 355 TGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNY-HRIWMTIL--CQKYN--EL 409
+G+E L V ISKA+ANQR G + RTGPGKCFRLYT Y H + + Q+ N +
Sbjct: 670 SGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAWAYKHELEEQPIPEIQRTNLGNV 729
Query: 410 IWKMLSLFSNVLVNFDFIDPPLEEALLKAFELLYALGALNKAGQLTRVGRQMAEFPIDPK 469
+ + SL + LV+FDF+DPP +E L+ A E LYALGALN G+LT++GR+MAEFP DP
Sbjct: 730 VLMLKSLGIHDLVHFDFLDPPPQETLVIALEQLYALGALNHRGELTKLGRRMAEFPCDPC 789
Query: 470 LSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALL 529
+SK I++ +KY+CS+EI+TIAAML ++FYRPK + I+AD+AR F GD I L+
Sbjct: 790 MSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKAQVIHADSARKGF-WSPAGDHITLM 848
Query: 530 RVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVEIDT 576
VYN W+E ++S WC ENY+Q +MKRARD+RDQL GL RVEI+T
Sbjct: 849 NVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVGLLERVEIET 895
>sp|Q10752|CDC28_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
cdc28 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=cdc28 PE=3 SV=2
Length = 1055
Score = 633 bits (1632), Expect = e-180, Method: Compositional matrix adjust.
Identities = 318/575 (55%), Positives = 418/575 (72%), Gaps = 25/575 (4%)
Query: 20 EDKIVDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSG 79
E + +DF ++ +N + + ++ + V KS L+ RK+LP+Y + ++LL+A++
Sbjct: 379 ESQQIDFLLDTKLSAENPVDTD-KMTDVKVEKS----LESSRKSLPVYQYKDDLLKAINE 433
Query: 80 YPVLAIVGETGSGKTTQIPQYLYE--------------PRWVAAMSVAARVSQEMGVKLG 125
Y VL IV ETGSGKTTQ+PQ+L+E PR VAAMSVAARV++EM V+LG
Sbjct: 434 YQVLLIVAETGSGKTTQLPQFLHEAGYTKGNKKICCTQPRRVAAMSVAARVAKEMDVRLG 493
Query: 126 HEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFG 185
EVGYSIRFE+ TS+KTV+KY+TD MLLRE + EP L SYSV+I+DEA ERTL TD LFG
Sbjct: 494 QEVGYSIRFENATSEKTVIKYLTDGMLLREFLTEPDLASYSVIIIDEAHERTLHTDILFG 553
Query: 186 LLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEA 245
L+KD+ +RPDLK+LISSAT+DAEKFS YF AP+F +PGRRYPV+++YT PE +YI+A
Sbjct: 554 LVKDIARFRPDLKVLISSATIDAEKFSAYFDEAPVFYVPGRRYPVDIYYTPQPEANYIQA 613
Query: 246 AIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTE 305
AI T LQIH +P GDILVFLTGQDEIE E +++ R LG +I E+I+CPIYANLP+E
Sbjct: 614 AITTILQIHTTQPAGDILVFLTGQDEIELMSENMQELCRILGKRIPEIILCPIYANLPSE 673
Query: 306 LQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPI 365
LQAKIF+PTP ARKVVLATNIAETS+TIDG+ +VI GF K YNP+TGMESL+ P
Sbjct: 674 LQAKIFDPTPPGARKVVLATNIAETSITIDGVNFVIDSGFVKQNMYNPRTGMESLVSVPC 733
Query: 366 SKASANQRTGLSERTGPGKCFRLYTLHNYHR---IWMTILCQKYN--ELIWKMLSLFSNV 420
S+ASA+QR G + R GPGKCFRLYT Y+ + + Q+ N ++ + SL N
Sbjct: 734 SRASADQRAGRAGRVGPGKCFRLYTRRTYNNELDMVTSPEIQRTNLTNIVLLLKSLGINN 793
Query: 421 LVNFDFIDPPLEEALLKAFELLYALGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKY 480
L++FDF+D P E L+++ ELLYALGALN G+LT++GRQMAEFP DP LSK++++ KY
Sbjct: 794 LLDFDFMDAPPPETLMRSLELLYALGALNNRGELTKLGRQMAEFPTDPMLSKSLIASSKY 853
Query: 481 KCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNY 540
C +E+++I +ML +S+FYRPKDK + AD AR NF GD + LL ++N W + ++
Sbjct: 854 GCVEEVLSIVSMLGEASSLFYRPKDKIMEADKARANFTQPG-GDHLTLLHIWNEWVDTDF 912
Query: 541 STEWCRENYIQVSSMKRARDIRDQLEGLFARVEID 575
S W REN++Q S+ RARD+RDQL L RVEI+
Sbjct: 913 SYNWARENFLQYKSLCRARDVRDQLANLCERVEIE 947
>sp|Q54F05|DHX8_DICDI ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum GN=dhx8
PE=3 SV=1
Length = 1160
Score = 591 bits (1524), Expect = e-168, Method: Compositional matrix adjust.
Identities = 288/543 (53%), Positives = 397/543 (73%), Gaps = 20/543 (3%)
Query: 51 KSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------- 103
K+T ++E+R++LPI+P E LQAVS + +L ++GETGSGKTTQ+ QYL E
Sbjct: 495 KATSRSIKEQRESLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEAGYGTRG 554
Query: 104 ------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIV 157
PR VAAMSV+ RV++E G +LG EVGY+IRFEDCTS +T++K+MTD +LLRE +
Sbjct: 555 KIGCTQPRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLRECL 614
Query: 158 IEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGS 217
++P+L +YSV+I+DEA ERT+STD LFGLLK + RP+LK+LI+SATL+AEKFS YF +
Sbjct: 615 LDPNLSAYSVIILDEAHERTISTDVLFGLLKQALQRRPELKVLITSATLEAEKFSKYFMN 674
Query: 218 APIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEE 277
A +F IPGR +PV++ YTK PE DY++A+++T +QIH++EP GDIL+FLTGQ+EI+ A +
Sbjct: 675 AQLFIIPGRTFPVDIRYTKDPEADYLDASLITVMQIHLSEPPGDILLFLTGQEEIDAACQ 734
Query: 278 ILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGI 337
IL +R + LG+ + +LII P+Y+ LP+E+Q KIFEP P +RKVV+ATNIAETSLTIDGI
Sbjct: 735 ILYERMKSLGSNVPDLIILPVYSALPSEMQTKIFEPAPPGSRKVVIATNIAETSLTIDGI 794
Query: 338 KYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRI 397
YVI PGF+K K +NPK GM+SL+V PIS+A+A QR+G + RTGPGKC+RLYT +
Sbjct: 795 YYVIDPGFSKQKCFNPKNGMDSLVVAPISQAAARQRSGRAGRTGPGKCYRLYTESAFKNE 854
Query: 398 WMT-----ILCQKYNELIWKMLSLFSNVLVNFDFIDPPLEEALLKAFELLYALGALNKAG 452
+ I + M ++ N L+NFDF+DPP + L+ A E LY+LGAL++ G
Sbjct: 855 MLASSIPEIQRTNLGNTVLTMKAMGINDLLNFDFMDPPPVQTLVSAMEQLYSLGALDEEG 914
Query: 453 QLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADN 512
LTR+GR+MAEFP+DP+LSK +++ CSDEI+T+ AML V N +FYRPK+KQ AD
Sbjct: 915 LLTRLGRKMAEFPLDPQLSKMLIASVDLGCSDEILTVVAMLSVQN-VFYRPKEKQALADQ 973
Query: 513 ARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARV 572
+ F + GD + LL VY W+ +S WC EN++Q S++RA+D+R QL + R
Sbjct: 974 KKAKFFQPE-GDHLTLLNVYESWKNSKFSNPWCFENFVQARSLRRAQDVRKQLITIMDRY 1032
Query: 573 EID 575
++D
Sbjct: 1033 KLD 1035
>sp|Q14562|DHX8_HUMAN ATP-dependent RNA helicase DHX8 OS=Homo sapiens GN=DHX8 PE=1 SV=1
Length = 1220
Score = 585 bits (1507), Expect = e-166, Method: Compositional matrix adjust.
Identities = 297/544 (54%), Positives = 384/544 (70%), Gaps = 22/544 (4%)
Query: 51 KSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------- 103
K T + E+R++LPIY E+L+QAV +L ++GETGSGKTTQI QYL E
Sbjct: 552 KKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRG 611
Query: 104 ------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIV 157
PR VAAMSVA RVS+E G LG EVGY+IRFEDCTS +TV+KYMTD MLLRE +
Sbjct: 612 KIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECL 671
Query: 158 IEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGS 217
I+P L Y+++++DEA ERT+ TD LFGLLK + R D+KL+++SATLDA KFS YF
Sbjct: 672 IDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYE 731
Query: 218 APIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEE 277
APIF IPGR YPVE+ YTK PE DY++A+++T +QIH+ EP GDILVFLTGQ+EI+ A E
Sbjct: 732 APIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACE 791
Query: 278 ILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGI 337
IL +R + LG + ELII P+Y+ LP+E+Q +IF+P P +RKVV+ATNIAETSLTIDGI
Sbjct: 792 ILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGI 851
Query: 338 KYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRI 397
YV+ PGF K K YN KTG++ L+V PIS+A A QR G + RTGPGKC+RLYT Y
Sbjct: 852 YYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDE 911
Query: 398 WMTILC---QKYNELIWKMLSLFS---NVLVNFDFIDPPLEEALLKAFELLYALGALNKA 451
+T Q+ N L +LSL + N L++FDF+D P E L+ A E LY LGAL+
Sbjct: 912 MLTTNVPEIQRTN-LASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDE 970
Query: 452 GQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYAD 511
G LTR+GR+MAEFP++P L K ++ CS+E++TI +ML V N +FYRPKDKQ AD
Sbjct: 971 GLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALAD 1029
Query: 512 NARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFAR 571
+ FH + GD + LL VYN W+ +S WC EN+IQ S++RA+DIR Q+ G+ R
Sbjct: 1030 QKKAKFHQTE-GDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDR 1088
Query: 572 VEID 575
++D
Sbjct: 1089 HKLD 1092
>sp|A2A4P0|DHX8_MOUSE ATP-dependent RNA helicase DHX8 OS=Mus musculus GN=Dhx8 PE=2 SV=1
Length = 1244
Score = 584 bits (1506), Expect = e-166, Method: Compositional matrix adjust.
Identities = 297/544 (54%), Positives = 384/544 (70%), Gaps = 22/544 (4%)
Query: 51 KSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------- 103
K T + E+R++LPIY E+L+QAV +L ++GETGSGKTTQI QYL E
Sbjct: 576 KKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRG 635
Query: 104 ------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIV 157
PR VAAMSVA RVS+E G LG EVGY+IRFEDCTS +TV+KYMTD MLLRE +
Sbjct: 636 KIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECL 695
Query: 158 IEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGS 217
I+P L Y+++++DEA ERT+ TD LFGLLK + R D+KL+++SATLDA KFS YF
Sbjct: 696 IDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYE 755
Query: 218 APIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEE 277
APIF IPGR YPVE+ YTK PE DY++A+++T +QIH+ EP GDILVFLTGQ+EI+ A E
Sbjct: 756 APIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACE 815
Query: 278 ILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGI 337
IL +R + LG + ELII P+Y+ LP+E+Q +IF+P P +RKVV+ATNIAETSLTIDGI
Sbjct: 816 ILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGI 875
Query: 338 KYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRI 397
YV+ PGF K K YN KTG++ L+V PIS+A A QR G + RTGPGKC+RLYT Y
Sbjct: 876 YYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDE 935
Query: 398 WMTILC---QKYNELIWKMLSLFS---NVLVNFDFIDPPLEEALLKAFELLYALGALNKA 451
+T Q+ N L +LSL + N L++FDF+D P E L+ A E LY LGAL+
Sbjct: 936 MLTTNVPEIQRTN-LASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDE 994
Query: 452 GQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYAD 511
G LTR+GR+MAEFP++P L K ++ CS+E++TI +ML V N +FYRPKDKQ AD
Sbjct: 995 GLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALAD 1053
Query: 512 NARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFAR 571
+ FH + GD + LL VYN W+ +S WC EN+IQ S++RA+DIR Q+ G+ R
Sbjct: 1054 QKKAKFHQTE-GDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDR 1112
Query: 572 VEID 575
++D
Sbjct: 1113 HKLD 1116
>sp|Q38953|DHX8_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At3g26560 PE=1 SV=2
Length = 1168
Score = 582 bits (1501), Expect = e-165, Method: Compositional matrix adjust.
Identities = 291/537 (54%), Positives = 383/537 (71%), Gaps = 20/537 (3%)
Query: 57 LQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------------- 103
+QE+R++LPIY +EL+QAV VL ++GETGSGKTTQ+ QYL E
Sbjct: 508 IQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKIGCTQ 567
Query: 104 PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLE 163
PR VAAMSVA RV++E G +LG EVGY+IRFEDCT TV+KYMTD MLLREI+I+ +L
Sbjct: 568 PRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLS 627
Query: 164 SYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKI 223
YSV+++DEA ERT+ TD LFGLLK L+ R DL+L+++SATLDAEKFS YF + IF I
Sbjct: 628 QYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCNIFTI 687
Query: 224 PGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRT 283
PGR +PVE+ YTK PE DY++AA++T LQIH+ EP GDILVFLTGQ+EI+ A + L +R
Sbjct: 688 PGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQSLYERM 747
Query: 284 RGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHP 343
+GLG + ELII P+Y+ LP+E+Q++IF+P P RKVV+ATNIAE SLTIDGI YV+ P
Sbjct: 748 KGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDP 807
Query: 344 GFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIWMTILC 403
GFAK YNPK G+ESL++ PIS+ASA QR G + RTGPGKC+RLYT Y
Sbjct: 808 GFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSI 867
Query: 404 QKYNELIWKMLSLFS-----NVLVNFDFIDPPLEEALLKAFELLYALGALNKAGQLTRVG 458
+ + M +L N L++FDF+DPP +AL+ A E LY+LGAL++ G LT++G
Sbjct: 868 PEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGALDEEGLLTKLG 927
Query: 459 RQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFH 518
R+MAEFP++P LSK +++ CSDEI+T+ AM+ GN IFYRP++KQ AD R F
Sbjct: 928 RKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGN-IFYRPREKQAQADQKRAKFF 986
Query: 519 LGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVEID 575
+ GD + LL VY W+ N+S WC EN+IQ S++RA+D+R QL + + ++D
Sbjct: 987 QPE-GDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSIMDKYKLD 1042
>sp|Q09530|MOG5_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5
OS=Caenorhabditis elegans GN=mog-5 PE=1 SV=1
Length = 1200
Score = 570 bits (1468), Expect = e-161, Method: Compositional matrix adjust.
Identities = 283/539 (52%), Positives = 384/539 (71%), Gaps = 21/539 (3%)
Query: 51 KSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------- 103
++ L M+ E+R++LPI+ + L++A+ +L +VGETGSGKTTQ+ QY E
Sbjct: 528 RTNLSMV-EQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRG 586
Query: 104 ------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIV 157
PR VAAMSVA RV++E G KLG +VGY+IRFEDCTS T++KYMTD MLLRE +
Sbjct: 587 KIGCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECL 646
Query: 158 IEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGS 217
I+P L YS++++DEA ERT+ TD LFGLLK RP+LKL+I+SATLD+ KFS+YF
Sbjct: 647 IDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLE 706
Query: 218 APIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEE 277
APIF IPGR +PVE+ YT+ PE DY+EAA +T +QIH+ EP GD+LVFLTGQ+EI+ + E
Sbjct: 707 APIFTIPGRTFPVEILYTREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCE 766
Query: 278 ILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGI 337
+L +R + +G + ELII P+Y LP+E+Q +IF+P P RKVV+ATNIAETSLTIDGI
Sbjct: 767 VLYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGI 826
Query: 338 KYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRI 397
YV+ PGF K K YNPK+GM+SL+V PIS+A+A QR+G + RTGPGKC+RLYT +
Sbjct: 827 FYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDE 886
Query: 398 WMTILC---QKYN--ELIWKMLSLFSNVLVNFDFIDPPLEEALLKAFELLYALGALNKAG 452
+ Q+ N + ++ ++ N L++FDF+D P ++++ A L+ L AL+ G
Sbjct: 887 MLPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTLSALDGDG 946
Query: 453 QLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADN 512
LT++GR+MAEFP++P LSK ++ CS+E++TI AML V N IFYRPK+KQ +AD
Sbjct: 947 LLTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQN-IFYRPKEKQDHADQ 1005
Query: 513 ARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFAR 571
+ FH + GD + LL VYN W+ ++S WC EN+IQV SMKRA+DIR QL G+ R
Sbjct: 1006 KKAKFHQPE-GDHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMKRAQDIRKQLLGIMDR 1063
>sp|P24384|PRP22_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP22 PE=1 SV=1
Length = 1145
Score = 551 bits (1419), Expect = e-156, Method: Compositional matrix adjust.
Identities = 273/554 (49%), Positives = 384/554 (69%), Gaps = 22/554 (3%)
Query: 39 EFESELPNKSVV--KSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQ 96
E+E N+S+ K T + +R+TLP+Y EL+QAV L IVGETGSGKTTQ
Sbjct: 456 EWEKNRMNESISYGKRTSLPISAQRQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQ 515
Query: 97 IPQYLYE-------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTV 143
I QYL E PR VAA+SVA RV++E+G K+GH+VGY+IRFED T T
Sbjct: 516 ITQYLDEEGFSNYGMIGCTQPRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTR 575
Query: 144 LKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISS 203
+KYMTD ML RE +++P + YSV+++DEA ERT++TD LF LLK RP+LK++++S
Sbjct: 576 IKYMTDGMLQREALLDPEMSKYSVIMLDEAHERTVATDVLFALLKKAAIKRPELKVIVTS 635
Query: 204 ATLDAEKFSDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDIL 263
ATL++ KFS+YF + PI IPG+ +PVE+ Y++ P++DYIEAA+ + IH+NE GDIL
Sbjct: 636 ATLNSAKFSEYFLNCPIINIPGKTFPVEVLYSQTPQMDYIEAALDCVIDIHINEGPGDIL 695
Query: 264 VFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVL 323
VFLTGQ+EI+ EIL R + LG I EL+I P+Y+ LP+E+Q+KIFEPTP+ +RKVV
Sbjct: 696 VFLTGQEEIDSCCEILYDRVKTLGDSIGELLILPVYSALPSEIQSKIFEPTPKGSRKVVF 755
Query: 324 ATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPG 383
ATNIAETS+TIDGI YV+ PGFAK+ YN + G+E L+V+PIS+A ANQR G + RTGPG
Sbjct: 756 ATNIAETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPG 815
Query: 384 KCFRLYTLHNYHRIWM-----TILCQKYNELIWKMLSLFSNVLVNFDFIDPPLEEALLKA 438
KC+RLYT ++ + I Q + I + ++ N L+ FDF+DPP + +L A
Sbjct: 816 KCYRLYTESAFYNEMLENTVPEIQRQNLSHTILMLKAMGINDLLKFDFMDPPPKNLMLNA 875
Query: 439 FELLYALGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNS 498
LY L +L+ G+LT +G++M+ FP+DP LS++++S +CSDEI+TI +ML V N
Sbjct: 876 LTELYHLQSLDDEGKLTNLGKEMSLFPMDPTLSRSLLSSVDNQCSDEIVTIISMLSVQN- 934
Query: 499 IFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRA 558
+FYRPKD+Q+ AD+ + FH GD + LL VY W++ NYS ++C+ N++ +KRA
Sbjct: 935 VFYRPKDRQLEADSKKAKFH-HPYGDHLTLLNVYTRWQQANYSEQYCKTNFLHFRHLKRA 993
Query: 559 RDIRDQLEGLFARV 572
RD++ Q+ +F ++
Sbjct: 994 RDVKSQISMIFKKI 1007
>sp|O42643|PRP22_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp22 PE=1 SV=1
Length = 1168
Score = 550 bits (1418), Expect = e-156, Method: Compositional matrix adjust.
Identities = 281/545 (51%), Positives = 378/545 (69%), Gaps = 21/545 (3%)
Query: 46 NKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE-- 103
N S K T ++E+R+ LP++ ++ L+AVS +L ++GETGSGKTTQI QYL E
Sbjct: 492 NISYGKRTTLSMKEQREGLPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEEG 551
Query: 104 ------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCM 151
PR VAAMSVA RV++E+G ++G EVGY+IRFED TS T +KYMTD M
Sbjct: 552 YTSDSKMIGCTQPRRVAAMSVAKRVAEEVGCRVGEEVGYTIRFEDKTSRMTQIKYMTDGM 611
Query: 152 LLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKF 211
L RE +++P L YSV+I+DEA ERT++TD LFGLLK + RPDLKL+++SATLDAE+F
Sbjct: 612 LQRECLVDPLLSKYSVIILDEAHERTVATDVLFGLLKGTVLKRPDLKLIVTSATLDAERF 671
Query: 212 SDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDE 271
S YF PIF IPGR YPVE+ YTK PE DY++AA++T +QIH++E GDILVFLTGQ+E
Sbjct: 672 SSYFYKCPIFTIPGRSYPVEIMYTKQPEADYLDAALMTVMQIHLSEGPGDILVFLTGQEE 731
Query: 272 IERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETS 331
I+ + EIL +R++ LG I EL+I P+Y+ LP+E+Q++IFEP P RKVV+ATNIAETS
Sbjct: 732 IDTSCEILYERSKMLGDSIPELVILPVYSALPSEIQSRIFEPAPPGGRKVVIATNIAETS 791
Query: 332 LTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTL 391
LTIDGI YV+ PGF K ++PK GM+SL+V PIS+A A QR+G + RTGPGKC+RLYT
Sbjct: 792 LTIDGIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRSGRAGRTGPGKCYRLYTE 851
Query: 392 HNYHRIWM-----TILCQKYNELIWKMLSLFSNVLVNFDFIDPPLEEALLKAFELLYALG 446
Y + I Q + I + ++ N L+NFDF+DPP + ++ A + LYAL
Sbjct: 852 SAYRNEMLPSPIPEIQRQNLSHTILMLKAMGINDLLNFDFMDPPPAQTMIAALQNLYALS 911
Query: 447 ALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDK 506
AL+ G LT +GR+MA+FP++P+LSK +++ + CS+E+++I AML V N I+ RP++K
Sbjct: 912 ALDDEGLLTPLGRKMADFPMEPQLSKVLITSVELGCSEEMLSIIAMLSVPN-IWSRPREK 970
Query: 507 QIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLE 566
Q AD R F + D + LL VY W+ S WC E+YIQ M+RA D+R QL
Sbjct: 971 QQEADRQRAQFANPE-SDHLTLLNVYTTWKMNRCSDNWCYEHYIQARGMRRAEDVRKQLI 1029
Query: 567 GLFAR 571
L R
Sbjct: 1030 RLMDR 1034
>sp|O22899|DHX15_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At2g47250 PE=2 SV=1
Length = 729
Score = 526 bits (1354), Expect = e-148, Method: Compositional matrix adjust.
Identities = 268/547 (48%), Positives = 371/547 (67%), Gaps = 33/547 (6%)
Query: 59 EERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLY---------------- 102
E+R+ LP++ ++ L ++ L +VGETGSGKTTQIPQ++
Sbjct: 60 EKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRKWLV 119
Query: 103 ---EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIE 159
+PR VAAMSV+ RV+ EM V +G EVGYSIRFEDCTS +T+LKY+TD MLLRE + +
Sbjct: 120 GCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREAMAD 179
Query: 160 PSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAP 219
P LE Y V+I+DEA ERTL+TD LFGLLK+++ RPDLKL++ SATL+AEKF +YF AP
Sbjct: 180 PLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSGAP 239
Query: 220 IFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEIL 279
+ K+PGR +PVE+FYT+ PE DY+EAAI T +QIH+ EP GDILVFLTG++EIE A +
Sbjct: 240 LMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKI 299
Query: 280 KQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTP-------ERARKVVLATNIAETSL 332
+ LG ++ + + P+Y+ LP +Q KIF+P P RK+V++TNIAETSL
Sbjct: 300 NKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVVSTNIAETSL 359
Query: 333 TIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLH 392
TIDGI YVI PGFAK K YNP+ +ESLLV+PISKASA+QR+G + RT PGKCFRLYT
Sbjct: 360 TIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEK 419
Query: 393 NYH-----RIWMTILCQKYNELIWKMLSLFSNVLVNFDFIDPPLEEALLKAFELLYALGA 447
+++ + + IL + + L + LV+FDF+DPP E L++A E+L LGA
Sbjct: 420 SFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGA 479
Query: 448 LNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQ 507
L+ G LT+ G M+EFP+DP++SK ++ ++ CS+EI++++AML V N F RP++ Q
Sbjct: 480 LDDEGNLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAMLSVPN-CFVRPREAQ 538
Query: 508 IYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEG 567
AD A+ F D GD + LL VY+ +++ N WC EN++ +MK A ++R QL
Sbjct: 539 KAADEAKARFGHID-GDHLTLLNVYHAYKQNNEDPNWCFENFVNNRAMKSADNVRQQLVR 597
Query: 568 LFARVEI 574
+ +R +
Sbjct: 598 IMSRFNL 604
>sp|Q9P774|PRP16_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp16 PE=3 SV=2
Length = 1173
Score = 506 bits (1304), Expect = e-142, Method: Compositional matrix adjust.
Identities = 263/535 (49%), Positives = 367/535 (68%), Gaps = 21/535 (3%)
Query: 58 QEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE-------------P 104
+E+R+ LP + E+LL + VL +VGETGSGKTTQ+ Q+LYE P
Sbjct: 486 REQREFLPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQFLYEDGYHRNGMIGCTQP 545
Query: 105 RWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLES 164
R VAAMSVA RVS+EMGV+LG VGYSIRFED T TV+KYMTD +LLRE +++ +LE
Sbjct: 546 RRVAAMSVAKRVSEEMGVRLGSTVGYSIRFEDVTGPDTVIKYMTDGVLLRESLMQNNLEK 605
Query: 165 YSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIP 224
YSV+I+DEA ER+L+TD L GLLK +++ R D+KLL++SAT++++KFSD+FG AP F IP
Sbjct: 606 YSVIIMDEAHERSLNTDILMGLLKKVLSRRRDIKLLVTSATMNSQKFSDFFGGAPQFTIP 665
Query: 225 GRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTR 284
GR YPV++ + KAP DY+EAA+ LQIH+++P GDILVF+TGQ++IE EI+ R
Sbjct: 666 GRTYPVDIMFAKAPCSDYVEAAVRQVLQIHLSQPAGDILVFMTGQEDIEATCEIIADRLN 725
Query: 285 GLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPG 344
L L I PIY+ +P +LQAKIF+ RKVV+ATNIAETSLT+ GI YV+ G
Sbjct: 726 QL-HDAPRLSILPIYSQMPADLQAKIFDSAEPGVRKVVVATNIAETSLTVHGISYVVDTG 784
Query: 345 FAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHR-IWMTIL- 402
+ K+K YN K G+++L V PIS+A+ANQR G + RTGPG +RLYT Y R ++ T L
Sbjct: 785 YCKLKMYNSKLGIDTLQVTPISQANANQRAGRAGRTGPGIAYRLYTEMAYIREMFETTLP 844
Query: 403 -CQKYN--ELIWKMLSLFSNVLVNFDFIDPPLEEALLKAFELLYALGALNKAGQLTRVGR 459
Q+ N + + SL + +FDF+D P + L+ + L+ LGAL+ G+LT +G+
Sbjct: 845 EIQRTNLSNTVLILKSLGVEEISDFDFMDRPPNDTLMASLYELWTLGALDNFGKLTTLGK 904
Query: 460 QMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHL 519
+M+ FP+DP LSK I+ + YKC++EIITI +ML V S+FYRPK++ +D AR F++
Sbjct: 905 KMSLFPMDPSLSKLIIIAEDYKCTEEIITIVSMLSVP-SVFYRPKERAEESDAAREKFNV 963
Query: 520 GDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVEI 574
+ D + LL +Y W+ YS WC ++++ ++KRARDIR QL + ++ +I
Sbjct: 964 PE-SDHLMLLNIYQHWQRNGYSNSWCSKHFLHSKTLKRARDIRQQLVEIMSKQKI 1017
>sp|Q54NJ4|DHX15_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase dhx15
OS=Dictyostelium discoideum GN=dhx15 PE=3 SV=1
Length = 727
Score = 501 bits (1289), Expect = e-141, Method: Compositional matrix adjust.
Identities = 260/550 (47%), Positives = 371/550 (67%), Gaps = 25/550 (4%)
Query: 44 LPNKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLY- 102
+P K + E+RK LP++ E+ ++ + V+ +VGETGSGKTTQIPQ++
Sbjct: 57 IPKKETFSKRYYEILEKRKELPVWKQKEDFIKVIKENQVVILVGETGSGKTTQIPQFVVD 116
Query: 103 -------------EPRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTD 149
+PR VAA+SVA RVS+EM +LG EVGYSIRFE+ +S +T +KY+TD
Sbjct: 117 AGLIRPGKMVGVTQPRRVAAISVAKRVSEEMDFELGEEVGYSIRFEELSSARTFMKYLTD 176
Query: 150 CMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAE 209
MLLRE + +P+L Y V+I+DEA ERTLSTD LFGL+KD++ R DLKL++ SATL+A
Sbjct: 177 GMLLRESMSDPTLNKYDVIILDEAHERTLSTDILFGLIKDILKRRKDLKLIVMSATLEAG 236
Query: 210 KFSDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQ 269
KF YF +AP+ K+PGR +PVE+FYT+ DY+E+A+ T + IH NE TGDILVFLTG+
Sbjct: 237 KFQKYFENAPLIKVPGRLHPVEIFYTEEAAKDYLESAVRTVIDIHTNEGTGDILVFLTGE 296
Query: 270 DEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAE 329
+EIE +++ TR G + + P+Y++LP Q+KIF+ E RK +++TNIAE
Sbjct: 297 EEIEDTCAKIQRETRERG--LPPMKTLPLYSSLPIYQQSKIFDTCKE--RKCIVSTNIAE 352
Query: 330 TSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLY 389
TSLTIDGI +V+ PGF+K K+YNP++ +ESLLV PISKASANQR G + RT PGKCFRLY
Sbjct: 353 TSLTIDGIVFVVDPGFSKQKTYNPRSRVESLLVAPISKASANQRAGRAGRTRPGKCFRLY 412
Query: 390 TLHNYHRIWMT-----ILCQKYNELIWKMLSLFSNVLVNFDFIDPPLEEALLKAFELLYA 444
T + + + IL ++ ++L L LV+FDF+DPP+ + L++A E+L+
Sbjct: 413 TEKAFKELMIQQTHPEILRSNLASVVLQLLKLGVVDLVHFDFMDPPVPDTLIRALEVLHY 472
Query: 445 LGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPK 504
LGAL+ GQLT +G M+EFP+DP+LSK ++ + CS+EI+TIAAML N F RPK
Sbjct: 473 LGALDDEGQLTEIGSIMSEFPLDPQLSKMLIVSAERSCSNEILTIAAMLSAPNC-FMRPK 531
Query: 505 DKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQ 564
D +I AD+A+ +F D GD + +L VY+ +++ WC +N++ ++K+A +R Q
Sbjct: 532 DNRIEADSAKKSFDHFD-GDHLTMLNVYHSFKKNGEDPTWCYDNFLNHRAIKQADSVRSQ 590
Query: 565 LEGLFARVEI 574
L + R ++
Sbjct: 591 LARILTRFKL 600
>sp|Q17R09|PRP16_BOVIN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Bos
taurus GN=DHX38 PE=2 SV=1
Length = 1227
Score = 500 bits (1288), Expect = e-140, Method: Compositional matrix adjust.
Identities = 264/571 (46%), Positives = 377/571 (66%), Gaps = 32/571 (5%)
Query: 20 EDKIVDFFSESVFDGDNF---DEFESELPNKSVVKSTLEMLQEERKTLPIYPFWEELLQA 76
ED VD+ +E F D+ E SE K KS LE +R+ LPI+ +ELL
Sbjct: 493 EDGKVDYRTEQKF-ADHMKKKSEASSEFAKK---KSILE----QRQYLPIFAVQQELLTI 544
Query: 77 VSGYPVLAIVGETGSGKTTQIPQYLYE-------------PRWVAAMSVAARVSQEMGVK 123
+ ++ +VGETGSGKTTQ+ QYL+E PR VAAMSVA RVS+EMG
Sbjct: 545 IRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGGN 604
Query: 124 LGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNL 183
LG EVGY+IRFEDCTS+ T++KYMTD +LLRE + E L+ YS +I+DEA ER+L+TD L
Sbjct: 605 LGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVL 664
Query: 184 FGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFYTKAPEVDYI 243
FGLL++++ R DLKL+++SAT+DAEKF+ +FG+ PIF IPGR +PV++ ++K P+ DY+
Sbjct: 665 FGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYV 724
Query: 244 EAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLP 303
EAA+ +LQ+H++ GDIL+F+ GQ++IE + + + L A L + PIY+ LP
Sbjct: 725 EAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPA-LAVLPIYSQLP 783
Query: 304 TELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVN 363
++LQAKIF+ P+ RK ++ATNIAETSLT+DGI +VI G+ K+K +NP+ GM++L +
Sbjct: 784 SDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIY 843
Query: 364 PISKASANQRTGLSERTGPGKCFRLYTLHNYHRIWMTILC---QKYN--ELIWKMLSLFS 418
PIS+A+ANQR+G + RTGPG+CFRLYT Y +T Q+ N ++ + SL
Sbjct: 844 PISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGV 903
Query: 419 NVLVNFDFIDPPLEEALLKAFELLYALGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLD 478
L+ F F+DPP E+ +L + L+ LGAL+ G LT GR M EFP+DP LSK ++
Sbjct: 904 QDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSC 963
Query: 479 KYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWREC 538
CS EI+ I +ML V +IFYRPK ++ +D R F + + D ++ L VY W+
Sbjct: 964 DMGCSSEILLIVSMLSV-PAIFYRPKGREEESDQIREKFAVPE-SDHLSYLNVYLQWKNN 1021
Query: 539 NYSTEWCRENYIQVSSMKRARDIRDQLEGLF 569
NYST WC +++I +M++ R++R QL+ +
Sbjct: 1022 NYSTIWCNDHFIHAKAMRKVREVRAQLKDIM 1052
>sp|Q92620|PRP16_HUMAN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Homo
sapiens GN=DHX38 PE=1 SV=2
Length = 1227
Score = 499 bits (1284), Expect = e-140, Method: Compositional matrix adjust.
Identities = 266/584 (45%), Positives = 381/584 (65%), Gaps = 32/584 (5%)
Query: 9 KQQREKCTFEIEDKIVDFFSESVFDGDNF---DEFESELPNKSVVKSTLEMLQEERKTLP 65
K++ E ED VD+ +E F D+ E SE K KS LE +R+ LP
Sbjct: 482 KKEEEPDKAVTEDGKVDYRTEQKF-ADHMKRKSEASSEFAKK---KSILE----QRQYLP 533
Query: 66 IYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE-------------PRWVAAMSV 112
I+ +ELL + ++ +VGETGSGKTTQ+ QYL+E PR VAAMSV
Sbjct: 534 IFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSV 593
Query: 113 AARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDE 172
A RVS+EMG LG EVGY+IRFEDCTS+ T++KYMTD +LLRE + E L+ YS +I+DE
Sbjct: 594 AKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAIIMDE 653
Query: 173 AQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVEL 232
A ER+L+TD LFGLL++++ R DLKL+++SAT+DAEKF+ +FG+ PIF IPGR +PV++
Sbjct: 654 AHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPGRTFPVDI 713
Query: 233 FYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAE 292
++K P+ DY+EAA+ +LQ+H++ GDIL+F+ GQ++IE + + + L A
Sbjct: 714 LFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPA- 772
Query: 293 LIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYN 352
L + PIY+ LP++LQAKIF+ P+ RK ++ATNIAETSLT+DGI +VI G+ K+K +N
Sbjct: 773 LAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFN 832
Query: 353 PKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIWMTILC---QKYN-- 407
P+ GM++L + PIS+A+ANQR+G + RTGPG+CFRLYT Y +T Q+ N
Sbjct: 833 PRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLA 892
Query: 408 ELIWKMLSLFSNVLVNFDFIDPPLEEALLKAFELLYALGALNKAGQLTRVGRQMAEFPID 467
++ + SL L+ F F+DPP E+ +L + L+ LGAL+ G LT GR M EFP+D
Sbjct: 893 NVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLD 952
Query: 468 PKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIA 527
P LSK ++ CS EI+ I +ML V +IFYRPK ++ +D R F + + D +
Sbjct: 953 PALSKMLIVSCDMGCSSEILLIVSMLSV-PAIFYRPKGREEESDQIREKFAVPE-SDHLT 1010
Query: 528 LLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFAR 571
L VY W+ NYST WC +++I +M++ R++R QL+ + +
Sbjct: 1011 YLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQ 1054
>sp|P34498|MOG1_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1
OS=Caenorhabditis elegans GN=mog-1 PE=1 SV=2
Length = 1131
Score = 498 bits (1282), Expect = e-140, Method: Compositional matrix adjust.
Identities = 258/566 (45%), Positives = 383/566 (67%), Gaps = 27/566 (4%)
Query: 33 DGDNFDE---FESELP-NKSVVKSTLEM-LQEERKTLPIYPFWEELLQAVSGYPVLAIVG 87
D N+ E F S + N++V +E ++++R+ LP++ ++++ + V+ IVG
Sbjct: 405 DSGNYKESHQFASHMKDNEAVSDFAMEKSIKQQREYLPVFACRQKMMNVIRENNVVIIVG 464
Query: 88 ETGSGKTTQIPQYLYE-------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRF 134
ETGSGKTTQ+ QYL E PR VAAMSVA RV+ EMGV LG +VGY+IRF
Sbjct: 465 ETGSGKTTQLAQYLLEDGFGDSGLIGCTQPRRVAAMSVARRVADEMGVDLGQDVGYAIRF 524
Query: 135 EDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYR 194
EDCTS+KT++KYMTD +LLRE + + SL+ YS +I+DEA ER+L+TD LFGLL+++I R
Sbjct: 525 EDCTSEKTIIKYMTDGILLRECLGDGSLDQYSAIIMDEAHERSLNTDVLFGLLREVIAKR 584
Query: 195 PDLKLLISSATLDAEKFSDYF-GSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQI 253
DLKL+++SAT+DA+KF+D+F G+ P F IPGR +PVELF+ + P DY++AA+ A+ I
Sbjct: 585 ADLKLIVTSATMDADKFADFFGGNCPTFTIPGRTFPVELFHARTPVEDYVDAAVKQAVTI 644
Query: 254 HVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEP 313
H+ GDIL+F+ GQ++IE E++K++ G + L + PIY+ LP++LQAKIF+
Sbjct: 645 HLGGMDGDILIFMPGQEDIECTCEMIKEKL-GELDEAPPLAVLPIYSQLPSDLQAKIFQR 703
Query: 314 TPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQR 373
P RK ++ATNIAETSLT+DGI +VI PGF K+K YNP+ GM++L + P+S+ASANQR
Sbjct: 704 APGGMRKAIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQR 763
Query: 374 TGLSERTGPGKCFRLYTLHNYHRIWMTILC---QKYN--ELIWKMLSLFSNVLVNFDFID 428
TG + RTGPG+C+RLYT + + Q+ N ++ + SL + L+ F F+D
Sbjct: 764 TGRAGRTGPGQCYRLYTERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKFHFMD 823
Query: 429 PPLEEALLKAFELLYALGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIIT 488
P ++ +L + L+ LGAL+ GQLT +GR+M EFP+DP LSK ++ + CSDE++T
Sbjct: 824 APPQDNMLNSMYQLWTLGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLT 883
Query: 489 IAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCREN 548
I +ML V +IF+RPK ++ AD + F + + D + L VY WR YS +WC +N
Sbjct: 884 IVSMLSV-PAIFFRPKGREEEADAKKEKFQVPE-SDHLTFLNVYIQWRTHKYSAKWCADN 941
Query: 549 YIQVSSMKRARDIRDQLEGLFARVEI 574
Y+ V ++K+ R++R QL+ + +++
Sbjct: 942 YLHVKALKKVREVRAQLKEIMQDLKL 967
>sp|O35286|DHX15_MOUSE Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Mus musculus GN=Dhx15 PE=2 SV=2
Length = 795
Score = 498 bits (1282), Expect = e-140, Method: Compositional matrix adjust.
Identities = 263/544 (48%), Positives = 356/544 (65%), Gaps = 30/544 (5%)
Query: 59 EERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE--------------- 103
++R LP++ + + + + +VGETGSGKTTQIPQ+ E
Sbjct: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACT 191
Query: 104 -PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
PR VAAMSVA RV+ EM V LG EVGYSIRFEDC+S KT+LKYMTD MLLRE + +P L
Sbjct: 192 QPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLL 251
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFK 222
E Y V+I+DEA ERTL+TD L G+LK+++ R DLK+++ SATLDA KF YF + P+
Sbjct: 252 ERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLT 311
Query: 223 IPGRRYPVELFYTKAPEVDYIEAAIVTALQIHV-NEPTGDILVFLTGQDEIERAEEILKQ 281
IPGR +PVE+FYT PE DY+EAAI T +QIH+ E GD+L+FLTGQ+EI+ A + +K+
Sbjct: 312 IPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKR 371
Query: 282 RTRGLGTKIAELIICPIYANLPTELQAKIFEPTPER------ARKVVLATNIAETSLTID 335
LG ++ ++ I P+Y+ LP + Q +IFEP P + RKVV++TNIAETSLTID
Sbjct: 372 EVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTID 431
Query: 336 GIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYH 395
G+ +VI PGFAK K YNP+ +ESLLV ISKASA QR G + RT PGKCFRLYT Y
Sbjct: 432 GVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYK 491
Query: 396 -----RIWMTILCQKYNELIWKMLSLFSNVLVNFDFIDPPLEEALLKAFELLYALGALNK 450
+ IL ++ ++ L + LV+FDF+DPP E L++A ELL L ALN
Sbjct: 492 TEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALND 551
Query: 451 AGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYA 510
G LT +G MAEFP+DP+L+K +++ Y CS+E+++I AML V F RP + + A
Sbjct: 552 DGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQC-FVRPTEAKKAA 610
Query: 511 DNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFA 570
D A+M F D GD + LL VY+ +++ + S +WC +N+I S+ A ++R QL +
Sbjct: 611 DEAKMRFAHID-GDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMD 669
Query: 571 RVEI 574
R +
Sbjct: 670 RFNL 673
>sp|Q5RAZ4|DHX15_PONAB Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Pongo abelii GN=DHX15 PE=2 SV=2
Length = 795
Score = 498 bits (1282), Expect = e-140, Method: Compositional matrix adjust.
Identities = 263/544 (48%), Positives = 356/544 (65%), Gaps = 30/544 (5%)
Query: 59 EERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE--------------- 103
++R LP++ + + + + +VGETGSGKTTQIPQ+ E
Sbjct: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACT 191
Query: 104 -PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
PR VAAMSVA RV+ EM V LG EVGYSIRFEDC+S KT+LKYMTD MLLRE + +P L
Sbjct: 192 QPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLL 251
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFK 222
E Y V+I+DEA ERTL+TD L G+LK+++ R DLK+++ SATLDA KF YF + P+
Sbjct: 252 ERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLT 311
Query: 223 IPGRRYPVELFYTKAPEVDYIEAAIVTALQIHV-NEPTGDILVFLTGQDEIERAEEILKQ 281
IPGR +PVE+FYT PE DY+EAAI T +QIH+ E GD+L+FLTGQ+EI+ A + +K+
Sbjct: 312 IPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKR 371
Query: 282 RTRGLGTKIAELIICPIYANLPTELQAKIFEPTPER------ARKVVLATNIAETSLTID 335
LG ++ ++ I P+Y+ LP + Q +IFEP P + RKVV++TNIAETSLTID
Sbjct: 372 EVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTID 431
Query: 336 GIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYH 395
G+ +VI PGFAK K YNP+ +ESLLV ISKASA QR G + RT PGKCFRLYT Y
Sbjct: 432 GVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYK 491
Query: 396 -----RIWMTILCQKYNELIWKMLSLFSNVLVNFDFIDPPLEEALLKAFELLYALGALNK 450
+ IL ++ ++ L + LV+FDF+DPP E L++A ELL L ALN
Sbjct: 492 TEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALND 551
Query: 451 AGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYA 510
G LT +G MAEFP+DP+L+K +++ Y CS+E+++I AML V F RP + + A
Sbjct: 552 DGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQC-FVRPTEAKKAA 610
Query: 511 DNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFA 570
D A+M F D GD + LL VY+ +++ + S +WC +N+I S+ A ++R QL +
Sbjct: 611 DEAKMRFAHID-GDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMD 669
Query: 571 RVEI 574
R +
Sbjct: 670 RFNL 673
>sp|O43143|DHX15_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Homo sapiens GN=DHX15 PE=1 SV=2
Length = 795
Score = 498 bits (1282), Expect = e-140, Method: Compositional matrix adjust.
Identities = 263/544 (48%), Positives = 356/544 (65%), Gaps = 30/544 (5%)
Query: 59 EERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE--------------- 103
++R LP++ + + + + +VGETGSGKTTQIPQ+ E
Sbjct: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACT 191
Query: 104 -PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
PR VAAMSVA RV+ EM V LG EVGYSIRFEDC+S KT+LKYMTD MLLRE + +P L
Sbjct: 192 QPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLL 251
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFK 222
E Y V+I+DEA ERTL+TD L G+LK+++ R DLK+++ SATLDA KF YF + P+
Sbjct: 252 ERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLT 311
Query: 223 IPGRRYPVELFYTKAPEVDYIEAAIVTALQIHV-NEPTGDILVFLTGQDEIERAEEILKQ 281
IPGR +PVE+FYT PE DY+EAAI T +QIH+ E GD+L+FLTGQ+EI+ A + +K+
Sbjct: 312 IPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKR 371
Query: 282 RTRGLGTKIAELIICPIYANLPTELQAKIFEPTPER------ARKVVLATNIAETSLTID 335
LG ++ ++ I P+Y+ LP + Q +IFEP P + RKVV++TNIAETSLTID
Sbjct: 372 EVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTID 431
Query: 336 GIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYH 395
G+ +VI PGFAK K YNP+ +ESLLV ISKASA QR G + RT PGKCFRLYT Y
Sbjct: 432 GVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYK 491
Query: 396 -----RIWMTILCQKYNELIWKMLSLFSNVLVNFDFIDPPLEEALLKAFELLYALGALNK 450
+ IL ++ ++ L + LV+FDF+DPP E L++A ELL L ALN
Sbjct: 492 TEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALND 551
Query: 451 AGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYA 510
G LT +G MAEFP+DP+L+K +++ Y CS+E+++I AML V F RP + + A
Sbjct: 552 DGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQC-FVRPTEAKKAA 610
Query: 511 DNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFA 570
D A+M F D GD + LL VY+ +++ + S +WC +N+I S+ A ++R QL +
Sbjct: 611 DEAKMRFAHID-GDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMD 669
Query: 571 RVEI 574
R +
Sbjct: 670 RFNL 673
>sp|P20095|PRP2_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
PRP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PRP2 PE=1 SV=1
Length = 876
Score = 497 bits (1279), Expect = e-139, Method: Compositional matrix adjust.
Identities = 285/608 (46%), Positives = 371/608 (61%), Gaps = 56/608 (9%)
Query: 7 WEKQQREKCTFEIEDKIVDFFSES------VFDGDNFDEFESE----LPNKSV-----VK 51
WE+QQ D D E VFD D ++ +E LP + + +
Sbjct: 144 WEEQQLRNAMAGQSDHPDDITLEGSDKYDYVFDTDAMIDYTNEEDDLLPEEKLQYEARLA 203
Query: 52 STLEM-------LQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE- 103
LE +QE RK LP++ + +ELLQ + VL I+GETGSGKTTQ+PQYL E
Sbjct: 204 QALETEEKRILTIQEARKLLPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQYLVED 263
Query: 104 --------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTS-DKTVLKYMT 148
PR VAA SVAARV+ EM V LG EVGY IRFED T+ +KTVLKYMT
Sbjct: 264 GFTDQGKLQIAITQPRRVAATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKTVLKYMT 323
Query: 149 DCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDA 208
D MLLRE + + L YS +++DEA ERTL+TD L GLLKD++ RP LKLLISSAT++A
Sbjct: 324 DGMLLREFLTDSKLSKYSCIMIDEAHERTLATDILIGLLKDILPQRPTLKLLISSATMNA 383
Query: 209 EKFSDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEP-TGDILVFLT 267
+KFS++F + PIF +PGRRYPV++ YT PE +YI AAI T QIH + GDILVFLT
Sbjct: 384 KKFSEFFDNCPIFNVPGRRYPVDIHYTLQPEANYIHAAITTIFQIHTTQSLPGDILVFLT 443
Query: 268 GQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNI 327
GQ+EIER + L++ LG++ ++II PIYANLP E Q KIF+PTPE RKVVLATNI
Sbjct: 444 GQEEIERTKTKLEEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQPTPENCRKVVLATNI 503
Query: 328 AETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFR 387
AETSLTIDGI+YVI PGF K SY P TGM LL P S+AS +QR G + R GPGKCFR
Sbjct: 504 AETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRAGRAGRVGPGKCFR 563
Query: 388 LYTLHNY-HRIWMT----ILCQKYNELIWKMLSLFSNVLVNFDFIDPPLEEALLKAFELL 442
++T +Y H + + I + + +LSL L+ F +D P L K+ E L
Sbjct: 564 IFTKWSYLHELELMPKPEITRTNLSNTVLLLLSLGVTDLIKFPLMDKPSIPTLRKSLENL 623
Query: 443 YALGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKY-KCS---DEIITIAAMLFVGNS 498
Y LGALN G +TR+G+ M EFP +P+ +K + + + +C +E +TI +ML S
Sbjct: 624 YILGALNSKGTITRLGKMMCEFPCEPEFAKVLYTAATHEQCQGVLEECLTIVSMLHETPS 683
Query: 499 IFYRPKDKQIYADNARMNFHLGDV-GDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKR 557
+F K + L +V D I L ++N WR +S WC+++ IQ +M R
Sbjct: 684 LFIGQKRDAAAS-------VLSEVESDHILYLEIFNQWRNSKFSRSWCQDHKIQFKTMLR 736
Query: 558 ARDIRDQL 565
R+IR+QL
Sbjct: 737 VRNIRNQL 744
>sp|P53131|PRP43_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP43 PE=1 SV=1
Length = 767
Score = 484 bits (1246), Expect = e-136, Method: Compositional matrix adjust.
Identities = 271/561 (48%), Positives = 359/561 (63%), Gaps = 49/561 (8%)
Query: 61 RKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLY---------------EPR 105
R+ LP++ +E L+ ++ VGETGSGKTTQIPQ++ +PR
Sbjct: 90 RRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPR 149
Query: 106 WVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESY 165
VAAMSVA RV++EM VKLG EVGYSIRFE+ TS+KT+LKYMTD MLLRE + + L Y
Sbjct: 150 RVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLSRY 209
Query: 166 SVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPG 225
S +I+DEA ERTL+TD L GLLK ++ RPDLK++I SATLDAEKF YF AP+ +PG
Sbjct: 210 SCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPG 269
Query: 226 RRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILK----- 280
R YPVEL+YT + DY+++AI T LQIH E GDIL+FLTG+DEIE A +
Sbjct: 270 RTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQ 329
Query: 281 -QRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPER-----ARKVVLATNIAETSLTI 334
R G G L + P+Y +LP Q +IFEP PE RKVV++TNIAETSLTI
Sbjct: 330 LVREEGCGP----LSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTI 385
Query: 335 DGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNY 394
DGI YV+ PGF+K K YNP+ +ESLLV+PISKASA QR G + RT PGKCFRLYT +
Sbjct: 386 DGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAF 445
Query: 395 HRIWMTILCQKYNELIWKMLS--------LFSNVLVNFDFIDPPLEEALLKAFELLYALG 446
+ ++ Q Y E++ LS L + LV+FDF+DPP E +++A E L L
Sbjct: 446 QK---ELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNYLA 502
Query: 447 ALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDK 506
L+ G LT +GR ++FP+DP L+ ++ +++CS EI+TI AML V N +F RP
Sbjct: 503 CLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIVAMLSVPN-VFIRPTKD 561
Query: 507 QIYADNARMNFHLGDVGDRIALLRVYNCWRE---CNYST-EWCRENYIQVSSMKRARDIR 562
+ AD+A+ F D GD I LL VY+ ++ Y +WCR++Y+ S+ A +IR
Sbjct: 562 KKRADDAKNIFAHPD-GDHITLLNVYHAFKSDEAYEYGIHKWCRDHYLNYRSLSAADNIR 620
Query: 563 DQLEGLFAR--VEIDTSIYSN 581
QLE L R +E++T+ Y +
Sbjct: 621 SQLERLMNRYNLELNTTDYES 641
>sp|Q20875|DHX15_CAEEL Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
F56D2.6 OS=Caenorhabditis elegans GN=F56D2.6 PE=2 SV=1
Length = 739
Score = 481 bits (1238), Expect = e-135, Method: Compositional matrix adjust.
Identities = 258/540 (47%), Positives = 347/540 (64%), Gaps = 35/540 (6%)
Query: 59 EERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE--------------- 103
E+R LP++ + E+ ++ + + +VGETGSGKTTQIPQ+ E
Sbjct: 71 EKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQAR 130
Query: 104 ------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIV 157
PR VAAMSVA RV++EM V LG EVGYSIRFEDC S++TVLKY TD MLLRE +
Sbjct: 131 LVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLREAM 190
Query: 158 IEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGS 217
P L+ Y VLI+DEA ERTL+TD L GL+K+++ R D+K++I SATLDA KF YF
Sbjct: 191 NSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYFED 250
Query: 218 APIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIH-VNEPTGDILVFLTGQDEIERAE 276
P+ +PGR +PVE+F+T E DY+EAAI T +QIH V E GDIL+FLTGQ+EIE A
Sbjct: 251 CPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEGDILLFLTGQEEIEEAC 310
Query: 277 EILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPER------ARKVVLATNIAET 330
+ + + + LG L P+Y+ LP Q +IFEP P +RK V++TNIAET
Sbjct: 311 KRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCVISTNIAET 370
Query: 331 SLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYT 390
SLTIDG+ +VI PGF+K K YNP+ +ESLLV PISKASA QR G + RT PGKCFRLYT
Sbjct: 371 SLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRTKPGKCFRLYT 430
Query: 391 LHNY-----HRIWMTILCQKYNELIWKMLSLFSNVLVNFDFIDPPLEEALLKAFELLYAL 445
Y + + IL ++ ++ L + LV+FDF+DPP E L++A ELL L
Sbjct: 431 ETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPAPETLMRALELLNYL 490
Query: 446 GALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKD 505
A+N G+LT +G MAEFP+DP+L+K +++ + CS+EI++I AML V + RP +
Sbjct: 491 QAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSITAMLSVPQC-WVRPNE 549
Query: 506 KQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQL 565
+ AD A+ F D GD + LL VY+ +++ +WC +N+I +MK A +R QL
Sbjct: 550 MRTEADEAKARFAHID-GDHLTLLNVYHSFKQNQEDPQWCYDNFINYRTMKTADTVRTQL 608
>sp|O42945|DHX15_SCHPO Probable pre-mRNA-splicing factor ATP-dependent RNA helicase prp43
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp43 PE=3 SV=1
Length = 735
Score = 478 bits (1231), Expect = e-134, Method: Compositional matrix adjust.
Identities = 256/550 (46%), Positives = 351/550 (63%), Gaps = 41/550 (7%)
Query: 59 EERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQY-LY--------------E 103
E R+ LP+Y EE L+ ++ VGETGSGKTTQIPQ+ LY +
Sbjct: 70 ETRRELPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLYDELPHLTNTQIACTQ 129
Query: 104 PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLE 163
PR VAAMSVA RV+ EM V LG EVGY+IRFEDC+ T+LKYMTD MLLRE + + L
Sbjct: 130 PRRVAAMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPNTLLKYMTDGMLLREAMTDHMLS 189
Query: 164 SYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKI 223
YS +I+DEA ERTL+TD L GL+K L RPDLK+++ SATLDA+KF YF AP+ +
Sbjct: 190 RYSCIILDEAHERTLATDILMGLMKRLATRRPDLKIIVMSATLDAKKFQKYFFDAPLLAV 249
Query: 224 PGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIE--------RA 275
PGR YPVE++YT+ PE DY+EAA+ T LQIHV E GDILVFLTG++EIE A
Sbjct: 250 PGRTYPVEIYYTQEPERDYLEAALRTVLQIHVEEGPGDILVFLTGEEEIEDACRKITLEA 309
Query: 276 EEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPER-----ARKVVLATNIAET 330
++++++ G L + P+Y +LP Q +IFEPTPE RKVV++TNIAET
Sbjct: 310 DDLVREGAAG------PLKVYPLYGSLPPNQQQRIFEPTPEDTKSGYGRKVVISTNIAET 363
Query: 331 SLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYT 390
SLTIDGI YV+ PGF+K K YNP+ +ESLLV+PISKASA QR G + RT PGKCFRLYT
Sbjct: 364 SLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYT 423
Query: 391 LHNYHR-----IWMTILCQKYNELIWKMLSLFSNVLVNFDFIDPPLEEALLKAFELLYAL 445
+ + + IL + + ++ L + LV+FD++DPP E +++A E L L
Sbjct: 424 EEAFRKELIEQTYPEILRSNLSSTVLELKKLGIDDLVHFDYMDPPAPETMMRALEELNYL 483
Query: 446 GALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKD 505
L+ G LT +GR+ +EFP+DP L+ ++ ++ CS+E++++ A+L V N +F RP
Sbjct: 484 NCLDDNGDLTPLGRKASEFPLDPNLAVMLIRSPEFYCSNEVLSLTALLSVPN-VFVRPNS 542
Query: 506 KQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQL 565
+ AD R F D GD + LL VY+ ++ + +WC +++ ++ A ++R QL
Sbjct: 543 ARKLADEMRQQFTHPD-GDHLTLLNVYHAYKSGEGTADWCWNHFLSHRALISADNVRKQL 601
Query: 566 EGLFARVEID 575
R E++
Sbjct: 602 RRTMERQEVE 611
>sp|P15938|PRP16_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP16 PE=1 SV=2
Length = 1071
Score = 455 bits (1170), Expect = e-127, Method: Compositional matrix adjust.
Identities = 255/555 (45%), Positives = 364/555 (65%), Gaps = 44/555 (7%)
Query: 45 PNKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE- 103
P+K +K T E L P++ +LL + V+ I+GETGSGKTTQ+ QYLYE
Sbjct: 338 PSKDDIKHTKEQL-------PVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEE 390
Query: 104 --------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCT-SDKTVLKYMT 148
PR VAA+SVA RV+ EM V LG EVGYSIRFED T S+ T LK++T
Sbjct: 391 GYANDRGKSIVVTQPRRVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVT 450
Query: 149 DCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDA 208
D +LLRE +++ +L+ YS +I+DEA ER+L+TD L G K L+ R DLKL+I+SAT++A
Sbjct: 451 DGILLRETLLDDTLDKYSCVIIDEAHERSLNTDILLGFFKILLARRRDLKLIITSATMNA 510
Query: 209 EKFSDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNE--PTGDILVFL 266
+KFS +FG+AP F IPGR +PV+ YT P DY+EAA+ A++IH+ +GDIL+F+
Sbjct: 511 KKFSAFFGNAPQFTIPGRTFPVQTIYTSNPVQDYVEAAVSQAVKIHLANDCSSGDILIFM 570
Query: 267 TGQDEIERAEEILKQR-----TRGLGT----KIAELIICPIYANLPTELQAKIFEPTPER 317
TGQ++IE + L+++ ++ GT +I ++ I PIY+ LP +LQ KIF+
Sbjct: 571 TGQEDIETTFDTLQEKFLQVYSKKFGTANFEEINDIEILPIYSALPADLQFKIFQDLHGT 630
Query: 318 ARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLS 377
RK+++ATNIAETSLTI GI+YVI G++K+K YNPK G++SL++ PISKA+A+QR+G +
Sbjct: 631 KRKIIIATNIAETSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSGRA 690
Query: 378 ERTGPGKCFRLYTLHNYHR-IWMTIL--CQKYNELIWKMLSLFSNV---LVNFDFID-PP 430
RT PG +RLYT + +++ + Q+ N +L +V L F FID PP
Sbjct: 691 GRTAPGTAYRLYTEDTFKEDMYLQTIPEIQRTNLSNTLLLLKSLDVTDELSKFPFIDKPP 750
Query: 431 LEEALLKAFELLYALGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIA 490
L+ L +EL + +GA++ +GQLT +G QMA+FP+ P LSK ++ + CSDE++TI
Sbjct: 751 LQTFLSSLYELWF-IGAIDTSGQLTPLGLQMAKFPLQPSLSKILLIAVRNGCSDEMLTIV 809
Query: 491 AMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYI 550
+ML V +FYRPK++Q AD AR F + D + LL V+ WR N+S+ WC ++++
Sbjct: 810 SMLSVPQ-VFYRPKERQKEADIARNKFFIAK-SDHLTLLNVFEQWRANNFSSHWCNKHFV 867
Query: 551 QVSSMKRARDIRDQL 565
Q S+ RARDIRDQL
Sbjct: 868 QYKSLVRARDIRDQL 882
>sp|Q03319|PRH1_SCHPO Probable ATP-dependent RNA helicase prh1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=prh1 PE=3 SV=2
Length = 719
Score = 445 bits (1145), Expect = e-124, Method: Compositional matrix adjust.
Identities = 240/561 (42%), Positives = 354/561 (63%), Gaps = 25/561 (4%)
Query: 24 VDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVL 83
DF + V DN + + S K LE +RK LPI+ + L Q + V+
Sbjct: 60 TDFGANEVVGSDNSSPEKRSENSPSKRKDILE----QRKNLPIWEAHDTLCQQIQDNRVI 115
Query: 84 AIVGETGSGKTTQIPQYLYE-------------PRWVAAMSVAARVSQEMGVKLGHEVGY 130
+VGETGSGK+TQIPQ+L E PR VAA+++A RV+ E G +LG +VGY
Sbjct: 116 VVVGETGSGKSTQIPQFLNECPYAQEGCVAITQPRRVAAVNLAKRVAAEQGCRLGEQVGY 175
Query: 131 SIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDL 190
SIRF+D TS KT +KY+TD MLLRE++ +P L Y LI+DEA ERTL TD L G +K +
Sbjct: 176 SIRFDDTTSKKTRIKYLTDGMLLRELINDPILSQYHTLILDEAHERTLMTDMLLGFVKKI 235
Query: 191 INYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTA 250
I RP L+++I SATL+AE+FS++F A I I GR+YPV++ YT PE DY++A + T
Sbjct: 236 IKKRPALRVIIMSATLNAERFSEFFDGAEICYISGRQYPVQIHYTYTPEPDYLDACLRTI 295
Query: 251 LQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKI 310
Q+H P GDILVFLTGQDEIE E ++K ++ L + + ++ CP++A+LP E Q ++
Sbjct: 296 FQLHTKLPPGDILVFLTGQDEIEALEALIKSYSKQLPSNLPQIQACPLFASLPQEQQLQV 355
Query: 311 FEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASA 370
F P RKVVL+TNIAETS+TI GI+YVI G AK+K +N K G+ESL V PIS+++A
Sbjct: 356 FLPALANHRKVVLSTNIAETSVTISGIRYVIDTGLAKIKQFNSKLGLESLTVQPISQSAA 415
Query: 371 NQRTGLSERTGPGKCFRLYTLHNYHRIWM-TILCQKYNELIWKMLSLFS---NVLVNFDF 426
QR+G + R G+C+R+YT ++ ++ TI K +L +L+L + N ++NF +
Sbjct: 416 MQRSGRAGREAAGQCYRIYTEADFDKLPKETIPEIKRIDLSQAVLTLKARGQNDVINFHY 475
Query: 427 IDPPLEEALLKAFELLYALGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEI 486
+DPP +E LL+A E LY++GAL+ G + +G QM+ P+ P L++ +++ ++ C E+
Sbjct: 476 MDPPSKEGLLRALEHLYSIGALDDNGHINDLGYQMSLIPLLPSLARAVLAAREHNCLSEV 535
Query: 487 ITIAAMLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYST--EW 544
I + + L +S+F P++K+ A AR+ F L GD + L + E ++ + +W
Sbjct: 536 IDVVSCLST-DSMFLFPQEKRDEAIEARLKF-LHSEGDLLTCLNALRQYLESSHDSRKQW 593
Query: 545 CRENYIQVSSMKRARDIRDQL 565
C +N+I ++K DIR QL
Sbjct: 594 CSQNFINRRALKTILDIRKQL 614
>sp|Q5RBD4|DHX35_PONAB Probable ATP-dependent RNA helicase DHX35 OS=Pongo abelii GN=DHX35
PE=2 SV=1
Length = 720
Score = 429 bits (1102), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/551 (41%), Positives = 352/551 (63%), Gaps = 36/551 (6%)
Query: 57 LQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------------- 103
++++R+ LP++ +L + Y + IVGETG GK+TQIPQYL E
Sbjct: 47 IEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 104 -PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSD-KTVLKYMTDCMLLREIVIEPS 161
PR VAA++VA RV++E G LGHEVGY IRF+DCT T +K++TD ML+RE++++P
Sbjct: 107 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPL 166
Query: 162 LESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFG----- 216
L YSV+++DEA ERTL TD GLLK + R DL+L+++SATLDA+KF D+F
Sbjct: 167 LTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETS 226
Query: 217 -----SAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDE 271
+ I + GR +PV++FY ++P DYI++ + T ++IH E GDIL FLTGQ+E
Sbjct: 227 DPARDTCVILTVGGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDILAFLTGQEE 286
Query: 272 IERAEEILKQRTRGL---GTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIA 328
+E +L ++ R L G K L + P+YA LP+ Q K+FE RKV++ATN+A
Sbjct: 287 VETVVSMLIEQARALARTGMK-RHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVA 345
Query: 329 ETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRL 388
ETS+TI GI YVI GF K+++YNP+T +E L+V P+S+ASANQR G R+ GKC+RL
Sbjct: 346 ETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRL 405
Query: 389 YTLHNYHRIWMTIL--CQKYN--ELIWKMLSLFSNVLVNFDFIDPPLEEALLKAFELLYA 444
YT + ++ + + Q+ N +I ++ +L + ++ F F+ PP +++++A ELLYA
Sbjct: 406 YTEEAFDKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYA 465
Query: 445 LGALNKAGQLTR-VGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRP 503
LG L+K +LT +G ++AEFP++P +K ++ + CS EI++IAAM+ + N IF P
Sbjct: 466 LGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQN-IFVVP 524
Query: 504 KDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRD 563
+++ A F + + GD + +L VY + + N +++WC+E+++ + RA +R+
Sbjct: 525 PNQKSQAIRVHRKFAVEE-GDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLVRAATVRE 583
Query: 564 QLEGLFARVEI 574
QL+ L + ++
Sbjct: 584 QLKKLLVKFQV 594
>sp|Q9H5Z1|DHX35_HUMAN Probable ATP-dependent RNA helicase DHX35 OS=Homo sapiens GN=DHX35
PE=1 SV=2
Length = 703
Score = 429 bits (1102), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/551 (41%), Positives = 353/551 (64%), Gaps = 36/551 (6%)
Query: 57 LQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------------- 103
++++R+ LP++ +L + Y + IVGETG GK+TQIPQYL E
Sbjct: 47 IEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 104 -PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSD-KTVLKYMTDCMLLREIVIEPS 161
PR VAA++VA RV++E G LGHEVGY IRF+DCT T +K++TD ML+RE++++P
Sbjct: 107 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPL 166
Query: 162 LESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFG----S 217
L YSV+++DEA ERTL TD GLLK + R DL+L+++SATLDA+KF D+F S
Sbjct: 167 LTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETS 226
Query: 218 AP------IFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDE 271
P I + GR +PV++FY ++P DYI++ + T ++IH E GD+L FLTGQ+E
Sbjct: 227 DPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEE 286
Query: 272 IERAEEILKQRTRGL---GTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIA 328
+E +L ++ R L G K L + P+YA LP+ Q K+FE RKV++ATN+A
Sbjct: 287 VETVVSMLIEQARALARTGMK-RHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVA 345
Query: 329 ETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRL 388
ETS+TI GI YVI GF K+++YNP+T +E L+V P+S+ASANQR G R+ GKC+RL
Sbjct: 346 ETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRL 405
Query: 389 YTLHNYHRIWMTIL--CQKYN--ELIWKMLSLFSNVLVNFDFIDPPLEEALLKAFELLYA 444
YT + ++ + + Q+ N +I ++ +L + ++ F F+ PP +++++A ELLYA
Sbjct: 406 YTEEAFDKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYA 465
Query: 445 LGALNKAGQLTR-VGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRP 503
LG L+K +LT +G ++AEFP++P +K ++ + CS EI++IAAM+ + N IF P
Sbjct: 466 LGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQN-IFVVP 524
Query: 504 KDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRD 563
+++ +A F + + GD + +L +Y + + N ++WC+E+++ + RA +R+
Sbjct: 525 PNQKSHAIRVHRKFAVEE-GDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVRAATVRE 583
Query: 564 QLEGLFARVEI 574
QL+ L + ++
Sbjct: 584 QLKKLLVKFQV 594
>sp|O17438|DHX15_STRPU Putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
(Fragment) OS=Strongylocentrotus purpuratus GN=PRP1 PE=2
SV=1
Length = 455
Score = 421 bits (1083), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/440 (49%), Positives = 296/440 (67%), Gaps = 14/440 (3%)
Query: 144 LKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISS 203
+KYMTD MLLRE + +P LE Y V+++DEA ERT++TD L GLLK++ R DLKL++ S
Sbjct: 1 IKYMTDGMLLREGMTDPLLERYGVILLDEAHERTVATDILMGLLKEVEKQRSDLKLVVMS 60
Query: 204 ATLDAEKFSDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPT-GDI 262
ATLDA KF YF +AP+ +PGR +PVE+FYT PE DY+EAAI T +QIH+ E GD+
Sbjct: 61 ATLDAGKFQHYFDNAPLMTVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDV 120
Query: 263 LVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPER----- 317
L+FLTGQ+EIE A + +K+ LG ++ +L P+Y+ LP +Q +IFE P
Sbjct: 121 LLFLTGQEEIEEACKRIKREVDNLGPEVGDLKTIPLYSTLPPAMQQRIFEHAPPNKANGA 180
Query: 318 -ARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGL 376
RKVV++TNIAETSLTIDG+ +VI PGFAK K YNP+ +ESLLV+PISKASA QR G
Sbjct: 181 IGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRVGR 240
Query: 377 SERTGPGKCFRLYTLHNY-----HRIWMTILCQKYNELIWKMLSLFSNVLVNFDFIDPPL 431
+ RT PGKCFRLYT Y + IL ++ ++ L + LV+FDF+DPP
Sbjct: 241 AGRTRPGKCFRLYTEKAYDSEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPA 300
Query: 432 EEALLKAFELLYALGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAA 491
E L++A ELL LGAL+ +G LTR+G MAEFP+DP+L+K +++ Y CS+EI+++ A
Sbjct: 301 PETLMRALELLNYLGALDDSGDLTRLGSMMAEFPLDPQLAKMVIASTDYSCSNEILSVTA 360
Query: 492 MLFVGNSIFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQ 551
ML V F RP + + AD A+M F D GD + LL VY+ +++ N +WC +N+IQ
Sbjct: 361 MLSVPQC-FLRPNEAKKLADEAKMRFAHID-GDHLTLLNVYHAFKQNNEDPQWCYDNFIQ 418
Query: 552 VSSMKRARDIRDQLEGLFAR 571
S+K A +R QL + R
Sbjct: 419 YRSLKSADSVRQQLARIMDR 438
>sp|Q80VY9|DHX33_MOUSE Putative ATP-dependent RNA helicase DHX33 OS=Mus musculus GN=Dhx33
PE=1 SV=1
Length = 698
Score = 404 bits (1037), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/537 (41%), Positives = 331/537 (61%), Gaps = 28/537 (5%)
Query: 55 EMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE----------- 103
E L+ +R++LPI+ +LL + ++GETGSGKTTQIPQYLYE
Sbjct: 56 EALELQRRSLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGIIAV 115
Query: 104 --PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPS 161
PR VAA+S+A RVS E +LG VGY++RFED TS+ T +K++TD MLLRE + +
Sbjct: 116 TQPRRVAAISLATRVSDEKRTELGKLVGYTVRFEDVTSEDTRIKFLTDGMLLREAISDSL 175
Query: 162 LESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDL-----KLLISSATLDAEKFSDYFG 216
L YS +I+DEA ERT+ TD LFG++K R +L K+++ SAT+D + FS YF
Sbjct: 176 LRKYSCVILDEAHERTIHTDVLFGVVKTAQKRRKELGKLPLKVIVMSATMDVDLFSQYFN 235
Query: 217 SAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTG-DILVFLTGQDEIERA 275
AP+ + GR++P+++FYTK P+ DY+ AA+V+ QIH P DILVFLTGQ+EIE
Sbjct: 236 RAPVLYLEGRQHPIQIFYTKQPQQDYLHAALVSVFQIHQEAPASQDILVFLTGQEEIEAM 295
Query: 276 EEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTID 335
+ + R L +++ P+YA+LP Q ++F+ P+ RKV+++TNIAETS+TI
Sbjct: 296 SKTCRDIARHLPDGCPSMLVLPLYASLPYSQQLRVFQGAPKGYRKVIISTNIAETSITIT 355
Query: 336 GIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYH 395
GIKYV+ G K K YNP +G+E L V +SK A QRTG + R G C+RLYT +
Sbjct: 356 GIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFE 415
Query: 396 RI-WMTIL-CQKYN--ELIWKMLSLFSNVLVNFDFIDPPLEEALLKAFELLYALGAL-NK 450
+ MT+ Q+ N +I ++L++ ++ FDF+ P + + A L LGAL +K
Sbjct: 416 KFEKMTVPEIQRCNLASVILQLLAMKVPNVLTFDFMSKPSPDHIEAAIAQLDLLGALEHK 475
Query: 451 AGQ--LTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQI 508
Q LT +GR+MA FP++P+ +KTI+ K+ C++EI+TI ++L V +S+ Y P ++
Sbjct: 476 DDQLTLTPIGRKMAAFPLEPRFAKTILLSSKFHCTEEILTIVSLLSV-DSVLYNPPARRD 534
Query: 509 YADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQL 565
+ R F + GD I LL +Y ++ + +WC+EN++ +M ++R QL
Sbjct: 535 EVQSVRKKF-ISSEGDHITLLNIYRTFKNIGGNKDWCKENFVNSKNMLLVAEVRAQL 590
>sp|Q9H6R0|DHX33_HUMAN Putative ATP-dependent RNA helicase DHX33 OS=Homo sapiens GN=DHX33
PE=1 SV=2
Length = 707
Score = 397 bits (1021), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/547 (40%), Positives = 332/547 (60%), Gaps = 30/547 (5%)
Query: 55 EMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE----------- 103
E ++ +R++LPI+ +LL + ++GETGSGKTTQIPQYLYE
Sbjct: 65 EAVELQRRSLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGIIAV 124
Query: 104 --PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPS 161
PR VAA+S+A RVS E +LG VGY++RF+D TS+ T +K++TD MLLRE + +
Sbjct: 125 TQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSL 184
Query: 162 LESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDL-----KLLISSATLDAEKFSDYFG 216
L YS +I+DEA ERT+ TD LFG++K R +L K+++ SAT+D + FS YF
Sbjct: 185 LRKYSCVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFN 244
Query: 217 SAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTG-DILVFLTGQDEIERA 275
AP+ + GR++P+++FYTK P+ DY+ AA+V+ QIH P+ DILVFLTGQ+EIE
Sbjct: 245 GAPVLYLEGRQHPIQVFYTKQPQNDYLHAALVSVFQIHQEAPSSQDILVFLTGQEEIEAM 304
Query: 276 EEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTID 335
+ + + L +++ P+YA+LP Q ++F+ P+ RKV+++TNIAETS+TI
Sbjct: 305 SKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAPKGYRKVIISTNIAETSITIT 364
Query: 336 GIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYH 395
GIKYV+ G K K YNP +G+E L V +SK A QRTG + R G C+RLYT +
Sbjct: 365 GIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFE 424
Query: 396 RI-WMTILCQKYNELIWKMLSLFS----NVLVNFDFIDPPLEEALLKAFELLYALGAL-N 449
+ MT+ + L ML L + NVL FDF+ P + + A L LGAL +
Sbjct: 425 KFDKMTVPEIQRCNLASVMLQLLAMKVPNVL-TFDFMSKPSPDHIQAAIAQLDLLGALEH 483
Query: 450 KAGQ--LTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQ 507
K Q LT +GR+MA FP++PK +KTI+ K+ C++EI+TI ++L V +S+ + P ++
Sbjct: 484 KDDQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTIVSLLSV-DSVLHNPPSRR 542
Query: 508 IYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEG 567
R F + GD + LL +Y ++ + +WC+EN++ +M ++R QL
Sbjct: 543 EEVQGVRKKF-ISSEGDHMTLLNIYRTFKNLGGNKDWCKENFVNSKNMTLVAEVRAQLRD 601
Query: 568 LFARVEI 574
+ ++ +
Sbjct: 602 ICLKMSM 608
>sp|Q9BKQ8|DHX35_CAEEL Probable ATP-dependent RNA helicase DHX35 homolog OS=Caenorhabditis
elegans GN=Y67D2.6 PE=3 SV=1
Length = 732
Score = 391 bits (1005), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/549 (39%), Positives = 326/549 (59%), Gaps = 34/549 (6%)
Query: 57 LQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------------- 103
+Q++R LPI+ +L Y + IVGETG GK+TQ+PQ+L E
Sbjct: 70 IQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGRQIVIT 129
Query: 104 -PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
PR VA +++A RV++E LGH+VGY++RF+D + T +K+MTD +LLREI+ +P L
Sbjct: 130 QPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLLREILADPLL 189
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYF------- 215
YS++++DEA ER+ +TD L GLL+ +I R DL++++SSATLDAE F D+F
Sbjct: 190 SKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATLDAELFKDFFEMNETGN 249
Query: 216 ---GSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEI 272
+A I + GR +PV + +TK DY ++A+ T + IH +E GDILVFLTGQDE+
Sbjct: 250 SDKDTAGIISVEGRTHPVAVHHTKTSVPDYCQSAVDTVINIHKHENPGDILVFLTGQDEV 309
Query: 273 ERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSL 332
E E L++ L L + P Y LP Q K F+ TP RKVV+ATNIAE S+
Sbjct: 310 EDVCEKLRELAGNL-KNCDRLWVVPCYGALPAREQMKAFDSTPHGTRKVVVATNIAEASI 368
Query: 333 TIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLH 392
TI GI YVI G+ K+++ + G+E+L+ +SKASA QR G + R PGKC+RLY
Sbjct: 369 TIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRIRPGKCYRLYPES 428
Query: 393 NYHRIWMTIL-----CQKYNELIWKMLSLFSNVLVNFDFIDPPLEEALLKAFELLYALGA 447
+ R + CQ + ++ ++ +L + F ++ PP A++ ELLYALGA
Sbjct: 429 EFERFAEGTVPEIQRCQMASTIL-QLKALGVQNVHRFHYLSPPPSWAMINGLELLYALGA 487
Query: 448 LNKAGQLTR-VGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDK 506
+++ QLT +G QMAEFP+ P SK ++ ++ CS E++TI AM+ + +F P +
Sbjct: 488 IDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQI-QDVFITPYRQ 546
Query: 507 QIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLE 566
+ AD R F + + GD + +L V+ + E S +WC ++++ + RA ++R QL
Sbjct: 547 RHQADVIRKKFAVEE-GDHMTMLNVFTKFVENGRSKKWCSDHFVNYRGLMRADNVRSQLV 605
Query: 567 GLFARVEID 575
L R EI+
Sbjct: 606 RLLKRFEIE 614
>sp|Q5XI69|DHX40_RAT Probable ATP-dependent RNA helicase DHX40 OS=Rattus norvegicus
GN=Dhx40 PE=2 SV=1
Length = 779
Score = 377 bits (968), Expect = e-103, Method: Compositional matrix adjust.
Identities = 223/586 (38%), Positives = 333/586 (56%), Gaps = 46/586 (7%)
Query: 33 DGDNFDEFESELPNKSVVKSTLE--MLQEERKTLPIYPFWEE---LLQAVSGYPVLAIVG 87
+G+ E + E P+ + E +E T P +P ++ L+QAV L + G
Sbjct: 17 EGERPVELQEERPSAVRIADREEKGCTSQEGGTTPTFPIQKQRKKLIQAVRDNSFLIVTG 76
Query: 88 ETGSGKTTQIPQYLYE-------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRF 134
TGSGKTTQ+P+YLYE PR VAA+SVA RV++EM LG +VGY +RF
Sbjct: 77 NTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRF 136
Query: 135 EDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLI--- 191
+DC+S +T +KYMTD LL+ I+ +P+L +SV+I+DEA ERTL+TD LFGLLK L
Sbjct: 137 DDCSSKETAIKYMTDGCLLKHILGDPNLNKFSVIILDEAHERTLTTDILFGLLKKLFQDK 196
Query: 192 --NYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPV-ELFYTKAPEVD-----YI 243
N + LK+++ SAT++ K S +FG+ PIF IPGR YPV E F D YI
Sbjct: 197 SPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYI 256
Query: 244 EAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGL-------GTKIAELIIC 296
+A + + IH+NE GDILVFLTGQ EIE++ E+L Q + T + L+I
Sbjct: 257 QAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLIL 316
Query: 297 PIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTG 356
P Y ++ T+ Q +IF P P RK V++TNI+ TSLTIDGI+YV+ GF K ++NP+ G
Sbjct: 317 PCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLG 376
Query: 357 MESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHR-----IWMTILCQKYNELIW 411
++ L V PISK+ A QR+G + RT GKCFR+Y+ +++ + I ++
Sbjct: 377 LDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVL 436
Query: 412 KMLSLFSNVLVNFDFIDPPLEEALLKAFELLYALGALNKAGQLTRVGRQMAEFPIDPKLS 471
+ L + ++ F ++DPP E +L+A + LY A++++G +TR+G M EFP+ P L+
Sbjct: 437 TLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLT 496
Query: 472 KTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKD----KQIYADNARMNFHLGDVGDRIA 527
++ C D ++ IAAML V N +F RP D K+ + + G D
Sbjct: 497 CAVIRAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEAEQKHRELAAKAGGFNDFAT 555
Query: 528 LLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVE 573
L ++ + WC++++I + A + QL L +++
Sbjct: 556 LAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLK 601
>sp|Q5R864|DHX40_PONAB Probable ATP-dependent RNA helicase DHX40 OS=Pongo abelii GN=DHX40
PE=2 SV=1
Length = 779
Score = 377 bits (967), Expect = e-103, Method: Compositional matrix adjust.
Identities = 221/586 (37%), Positives = 334/586 (56%), Gaps = 46/586 (7%)
Query: 33 DGDNFDEFESELPNKSVVKSTLE--MLQEERKTLPIYPFWEE---LLQAVSGYPVLAIVG 87
+G+ + + E P+ + E +E T P +P ++ ++QAV L + G
Sbjct: 17 EGERSRDLQEERPSAVCIADREEKGCTSQEGGTTPTFPIQKQRKKIIQAVRDNSFLIVTG 76
Query: 88 ETGSGKTTQIPQYLYE-------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRF 134
TGSGKTTQ+P+YLYE PR VAA+SVA RV++EM LG +VGY +RF
Sbjct: 77 NTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRF 136
Query: 135 EDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLI--- 191
+DC+S +T +KYMTD LL+ I+ +P+L +SV+I+DEA ERTL+TD LFGLLK L
Sbjct: 137 DDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEK 196
Query: 192 --NYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPV-ELFYTKAPEVD-----YI 243
N + LK+++ SAT++ K S +FG+ PIF IPGR YPV E F D YI
Sbjct: 197 SPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYI 256
Query: 244 EAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGL-------GTKIAELIIC 296
+A + + IH+NE GDILVFLTGQ EIE++ E+L Q + T + L+I
Sbjct: 257 QAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLIL 316
Query: 297 PIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTG 356
P Y ++ T+ Q +IF P P RK V++TNI+ TSLTIDGI+YV+ GF K ++NP+ G
Sbjct: 317 PCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLG 376
Query: 357 MESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHR-----IWMTILCQKYNELIW 411
++ L V PISK+ A QR+G + RT GKCFR+Y+ +++ + I ++
Sbjct: 377 LDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVL 436
Query: 412 KMLSLFSNVLVNFDFIDPPLEEALLKAFELLYALGALNKAGQLTRVGRQMAEFPIDPKLS 471
+ L + ++ F ++DPP E +L+A + LY A++++G +TR+G M EFP+ P L+
Sbjct: 437 TLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLT 496
Query: 472 KTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHL----GDVGDRIA 527
++ C D ++ IAAML V N +F RP D + + + + L G D
Sbjct: 497 CAVIKAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEAEQRHRELAAKAGGFNDFAT 555
Query: 528 LLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVE 573
L ++ + WC++++I + A + QL L +++
Sbjct: 556 LAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLK 601
>sp|Q6PE54|DHX40_MOUSE Probable ATP-dependent RNA helicase DHX40 OS=Mus musculus GN=Dhx40
PE=2 SV=1
Length = 779
Score = 377 bits (967), Expect = e-103, Method: Compositional matrix adjust.
Identities = 223/586 (38%), Positives = 333/586 (56%), Gaps = 46/586 (7%)
Query: 33 DGDNFDEFESELPNKSVVKSTLE--MLQEERKTLPIYPFWEE---LLQAVSGYPVLAIVG 87
+G+ E + E P+ + E +E T P +P ++ L+QAV L + G
Sbjct: 17 EGERPIELQEERPSAVRIADREEKGCTSQEGGTTPTFPIQKQRKKLIQAVRDNSFLIVTG 76
Query: 88 ETGSGKTTQIPQYLYE-------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRF 134
TGSGKTTQ+P+YLYE PR VAA+SVA RV++EM LG +VGY +RF
Sbjct: 77 NTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRF 136
Query: 135 EDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLI--- 191
+DC+S +T +KYMTD LL+ I+ +P+L +SV+I+DEA ERTL+TD LFGLLK L
Sbjct: 137 DDCSSKETAIKYMTDGCLLKHILGDPNLSKFSVIILDEAHERTLTTDILFGLLKKLFQDK 196
Query: 192 --NYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPV-ELFYTKAPEVD-----YI 243
N + LK+++ SAT++ K S +FG+ PIF IPGR YPV E F D YI
Sbjct: 197 SPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYI 256
Query: 244 EAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGL-------GTKIAELIIC 296
+A + + IH+NE GDILVFLTGQ EIE++ E+L Q + T + L+I
Sbjct: 257 QAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLIL 316
Query: 297 PIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTG 356
P Y ++ T+ Q +IF P P RK V++TNI+ TSLTIDGI+YV+ GF K ++NP+ G
Sbjct: 317 PCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLG 376
Query: 357 MESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYHR-----IWMTILCQKYNELIW 411
++ L V PISK+ A QR+G + RT GKCFR+Y+ + + + I ++
Sbjct: 377 LDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKEFWSQCMPDHVIPEIKRTSLTSVVL 436
Query: 412 KMLSLFSNVLVNFDFIDPPLEEALLKAFELLYALGALNKAGQLTRVGRQMAEFPIDPKLS 471
+ L + ++ F ++DPP E +L+A + LY A++++G +TR+G M EFP+ P L+
Sbjct: 437 TLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLT 496
Query: 472 KTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNFHL----GDVGDRIA 527
++ C D ++ IAAML V N +F RP D + + + + L G D
Sbjct: 497 CAVIRAASLDCEDLLLPIAAMLSVEN-VFIRPVDPEYQKEAEQRHRELAAKAGGFNDFAT 555
Query: 528 LLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQLEGLFARVE 573
L ++ + WC++++I + A + QL L +++
Sbjct: 556 LAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLK 601
>sp|Q8IX18|DHX40_HUMAN Probable ATP-dependent RNA helicase DHX40 OS=Homo sapiens GN=DHX40
PE=1 SV=2
Length = 779
Score = 375 bits (964), Expect = e-103, Method: Compositional matrix adjust.
Identities = 217/558 (38%), Positives = 324/558 (58%), Gaps = 44/558 (7%)
Query: 59 EERKTLPIYPFWEE---LLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------------ 103
+E T P +P ++ ++QAV L + G TGSGKTTQ+P+YLYE
Sbjct: 45 QEGGTTPTFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVT 104
Query: 104 -PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSL 162
PR VAA+SVA RV++EM LG +VGY +RF+DC+S +T +KYMTD LL+ I+ +P+L
Sbjct: 105 QPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNL 164
Query: 163 ESYSVLIVDEAQERTLSTDNLFGLLKDLI-----NYRPDLKLLISSATLDAEKFSDYFGS 217
+SV+I+DEA ERTL+TD LFGLLK L N + LK+++ SAT++ K S +FG+
Sbjct: 165 TKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGN 224
Query: 218 APIFKIPGRRYPV-ELFYTKAPEVD-----YIEAAIVTALQIHVNEPTGDILVFLTGQDE 271
PIF IPGR YPV E F D YI+A + + IH+NE GDILVFLTGQ E
Sbjct: 225 CPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFE 284
Query: 272 IERAEEILKQRTRGL-------GTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLA 324
IE++ E+L Q + T + L+I P Y ++ T+ Q +IF P P RK V++
Sbjct: 285 IEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVIS 344
Query: 325 TNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGK 384
TNI+ TSLTIDGI+YV+ GF K ++NP+ G++ L V PISK+ A QR+G + RT GK
Sbjct: 345 TNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGK 404
Query: 385 CFRLYTLHNYHR-----IWMTILCQKYNELIWKMLSLFSNVLVNFDFIDPPLEEALLKAF 439
CFR+Y+ +++ + I ++ + L + ++ F ++DPP E +L+A
Sbjct: 405 CFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEAL 464
Query: 440 ELLYALGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSI 499
+ LY A++++G +TR+G M EFP+ P L+ ++ C D ++ IAAML V N +
Sbjct: 465 KQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVEN-V 523
Query: 500 FYRPKDKQIYADNARMNFHL----GDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSM 555
F RP D + + + + L G D L ++ + WC++++I +
Sbjct: 524 FIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCL 583
Query: 556 KRARDIRDQLEGLFARVE 573
A + QL L +++
Sbjct: 584 FSAFRVEAQLRELIRKLK 601
>sp|P36009|DHR2_YEAST Probable ATP-dependent RNA helicase DHR2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=DHR2 PE=1
SV=1
Length = 735
Score = 363 bits (931), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 218/578 (37%), Positives = 335/578 (57%), Gaps = 35/578 (6%)
Query: 22 KIVDFFSESVFD--GDNFDEFESELPNKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSG 79
KIV F D D E+ L KS+ KS L + R+TLP+Y E++ +
Sbjct: 38 KIVKFNDSGEGDHVSDQRSNKENVLTYKSL-KSRASDLLKMRETLPVYQHKREIMSYIES 96
Query: 80 YPVLAIVGETGSGKTTQIPQYLYE---------------PRWVAAMSVAARVSQEMGVKL 124
PV ++GETGSGK+TQIPQ++ E PR VAA+++A RV+QE G KL
Sbjct: 97 NPVTVLIGETGSGKSTQIPQFVLEKLYDTKKHGSIAVTQPRRVAAINLATRVAQEHGCKL 156
Query: 125 GHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLF 184
G +VGYS+RF++ T+ +T LKY+TD MLLRE+++ L YSV+++DEA ERT+ TD +
Sbjct: 157 GEQVGYSVRFDNTTTTRTRLKYLTDGMLLRELMMNSDLREYSVIVIDEAHERTVLTDLIL 216
Query: 185 GLLKDLINY-RPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFYTKAPEVDYI 243
G LK LI RPDL++++ SATL AEKFS++F +API + GR++ V+ +Y KAP D +
Sbjct: 217 GFLKSLIQGPRPDLRIIVMSATLQAEKFSEFFNNAPILFVEGRKFDVKQYYLKAPTDDIV 276
Query: 244 EAAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIIC--PIYAN 301
+A I +QI+ E GDIL FL GQ+EI++A I+++ + + + +I P+YA
Sbjct: 277 DAVIRCCIQINQGEELGDILCFLPGQEEIDKAVTIMEKIAKYVSDEAPVPLIVPYPLYAA 336
Query: 302 LPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLL 361
LP Q+ +F P RKVV +TNIAETS+TI G+K+V+ G KVK + + G+ +LL
Sbjct: 337 LPAVQQSLVFAPIKGFKRKVVFSTNIAETSVTISGVKFVVDSGLRKVKVWRHQLGLATLL 396
Query: 362 VNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIWMT----ILCQKYNELIWKMLSLF 417
PIS+ASA QR+G + R GK FRLY +Y ++ I + +
Sbjct: 397 TVPISQASAMQRSGRAGRESEGKSFRLYCESDYVKLPKQSEPEIARSDVTSPVLMLKRYG 456
Query: 418 SNVLVNFDFIDPPLEEALLKAFELLYALGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSL 477
+ L+N+ + + P +EA++ + LY LGAL+ G++T+ G+QMA P+ P LS ++
Sbjct: 457 VDDLLNWTWFENPGKEAIVMGLQELYELGALDTRGKITKRGQQMALLPLQPHLSSVLIKA 516
Query: 478 DKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARMNF-HLGD-VGDRIALLRVYNCW 535
+ C ++I I + L V N + +++ + R++ + G GD I L +++ +
Sbjct: 517 SEVGCLSQVIDIVSCLSVENLLLNPSPEERDEVNERRLSLCNAGKRYGDLIMLKELFDIY 576
Query: 536 -----RECNYSTE---WCRENYIQVSSMKRARDIRDQL 565
+ + S+E WC+ I + K +RDQL
Sbjct: 577 FYELGKSQDASSERNDWCKGLCISIRGFKNVIRVRDQL 614
>sp|Q9HE06|YK99_SCHPO Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
C20H4.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=SPAC20H4.09 PE=3 SV=1
Length = 647
Score = 345 bits (884), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 208/559 (37%), Positives = 311/559 (55%), Gaps = 26/559 (4%)
Query: 44 LPNKSVVKS----TLEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQ 99
+PN+ + +S T L ++K LPI + +LL AV + ++G TG GKTTQIPQ
Sbjct: 1 MPNEFISQSLSTLTNTPLNIQKKLLPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQ 60
Query: 100 YLYE--------------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLK 145
+LYE PR + A SV+ RVS E+ G GYSI+F+ S+KT +K
Sbjct: 61 FLYEAGWASQNGIIGCTQPRRLVAKSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIK 120
Query: 146 YMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSAT 205
YMTD +LL EI +P LE YS++I+DE ERTLSTD L G+LK ++ R D +L++SSA+
Sbjct: 121 YMTDGILLNEIFFDPLLERYSIVILDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSAS 180
Query: 206 LDAEKFSDYFGSAPI--FKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDIL 263
+DA K S +FG + I G+ +PVE + + P +Y+++AI T + I+ P GDIL
Sbjct: 181 VDANKLSQFFGQDKVCTMSIEGKLFPVETLFLQKPTENYVDSAIETVININSTYPPGDIL 240
Query: 264 VFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVL 323
VFL+G+ EIE + ++ L+ P++A L + Q ++F RKV+
Sbjct: 241 VFLSGRKEIEYCIKKIEDSLIHASEDCQTLVPLPLHAGLTVDEQMRVFNIYDGDFRKVIF 300
Query: 324 ATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPG 383
+TNIAETS+TIDGI YV+ GF K + YNP T L+ PISK+SA QR+G + RT G
Sbjct: 301 STNIAETSITIDGIVYVVDSGFNKQRIYNPYTRTSKLINVPISKSSAIQRSGRAGRTMRG 360
Query: 384 KCFRLYTLHNY----HRIWMTILCQKYNELIWKMLSLFSNVLVNFDFIDPPLEEALLKAF 439
K FRLYT Y IL + L+ + L ++ F F P L+ A
Sbjct: 361 KVFRLYTEKAYSLMKEEFEADILNCDMSPLVLFLKGLGLKNILQFPFFVRPPTVHLMAAL 420
Query: 440 ELLYALGALNKAGQLTR-VGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNS 498
E LY LG L+++G LT +G Q++ +D +SK +++ +++ C+ EI++IA++L G
Sbjct: 421 EDLYLLGVLDESGNLTDPLGIQISNSFLDANISKALLTSNQFGCTHEILSIASILTAG-E 479
Query: 499 IFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRA 558
+FY P + + GD I L V+ + +WCR+NY+ ++++A
Sbjct: 480 VFYNPTSSSKNDAFVAHSSFFANEGDIITALNVFESFVGNKKDLQWCRKNYLNYQTLRQA 539
Query: 559 RDIRDQLEGLFARVEIDTS 577
DIR L + I T+
Sbjct: 540 LDIRTHLVRFLNKFSIPTA 558
>sp|P45018|HRPA_HAEIN ATP-dependent RNA helicase HrpA homolog OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=hrpA PE=3
SV=2
Length = 1304
Score = 317 bits (813), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 201/540 (37%), Positives = 301/540 (55%), Gaps = 49/540 (9%)
Query: 62 KTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE-------------PRWVA 108
++LP+ E+ + +S + V+ + GETGSGKTTQ+P+ E PR +A
Sbjct: 81 ESLPVSQRKVEIQKLISEHQVIVVAGETGSGKTTQLPKMCLELGFGNLGMIGHTQPRRIA 140
Query: 109 AMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVL 168
A SVAAR+++E+ +LG VGY +RF D SD T +K MTD +LL EI + L YS L
Sbjct: 141 ARSVAARIAEELETELGGLVGYKVRFNDQISDNTQIKLMTDGILLAEIQNDRFLNQYSCL 200
Query: 169 IVDEAQERTLSTDNLFGLLKDLI-NYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRR 227
I+DEA ER+L+ D + G LK L+ R DLKL+I+SAT+D E+FS +F +API ++ GR
Sbjct: 201 IIDEAHERSLNNDFILGYLKQLLPRRRRDLKLIITSATIDVERFSKHFNNAPIIEVSGRT 260
Query: 228 YPVELFYTKAPEVDYIE--AAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRG 285
YPVE+ Y E D + I+ A+ E GDIL+F+ G+ EI E L+++
Sbjct: 261 YPVEVRYRPVVEEDDQDQLQGILNAVDELQAEGRGDILIFMNGEREIRDTAEALQKQN-- 318
Query: 286 LGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGF 345
+ I P++A L + Q KIF P+ ++VLATN+AETSLT+ IKYVI PG
Sbjct: 319 ----LKHTEILPLFARLSAQEQNKIFHPSG--LNRIVLATNVAETSLTVPSIKYVIDPGT 372
Query: 346 AKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNYH-RIWMT---I 401
A++ Y+ +T ++ L + PIS+ASANQR G R G C RLY+ +++ R T I
Sbjct: 373 ARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEEDFNSRPEFTDPEI 432
Query: 402 LCQKYNELIWKMLSLFSNVLVNFDFIDPPLEEALLKAFELLYALGAL----NKAGQ---L 454
L +I +M +L + + F F+D P E + +LL LGA K+G+ L
Sbjct: 433 LRTNLASVILQMTALGLDDIEAFPFVDAPDERHIQDGVKLLEELGAFETVQTKSGEKRLL 492
Query: 455 TRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNAR 514
TRVGRQ+A+ P+DP+L+K I+S + C E++ I + L + + RP++KQ +D
Sbjct: 493 TRVGRQLAQLPVDPRLAKMILSAVNFGCVYEMMIIVSALSIQDP-RERPQEKQQASDEKH 551
Query: 515 MNFHLGDVGDRIALLRVYNCWR---------ECNYSTEWCRENYIQVSSMKRARDIRDQL 565
F + L N WR N C+++++ ++ +DI Q+
Sbjct: 552 RRF----ADKKSDFLAFLNLWRYLQEQQKESSKNQFRRQCQKDFLNYLRIREWQDIYHQI 607
>sp|P43329|HRPA_ECOLI ATP-dependent RNA helicase HrpA OS=Escherichia coli (strain K12)
GN=hrpA PE=3 SV=3
Length = 1300
Score = 315 bits (806), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 196/536 (36%), Positives = 299/536 (55%), Gaps = 43/536 (8%)
Query: 63 TLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE-------------PRWVAA 109
LP+ +++L+A+ + V+ + GETGSGKTTQ+P+ E PR +AA
Sbjct: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAA 135
Query: 110 MSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLI 169
+VA R+++E+ + G +GY +RF D SD T++K MTD +LL EI + L Y +I
Sbjct: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195
Query: 170 VDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYP 229
+DEA ER+L+ D L G LK+L+ RPDLK++I+SAT+D E+FS +F +API ++ GR YP
Sbjct: 196 IDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYP 255
Query: 230 VELFYTK-APEVDYIE----AAIVTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTR 284
VE+ Y E D E AI A+ E GDIL+F++G+ EI + L +
Sbjct: 256 VEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNK--- 312
Query: 285 GLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPG 344
L + E I P+YA L Q ++F+ R++VLATN+AETSLT+ GIKYVI PG
Sbjct: 313 -LNLRHTE--ILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPG 367
Query: 345 FAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLHNY-HRIWMT--- 400
A++ Y+ +T ++ L + PIS+ASANQR G R G C RLY+ ++ R T
Sbjct: 368 TARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPE 427
Query: 401 ILCQKYNELIWKMLSLFSNVLVNFDFIDPPLEEALLKAFELLYALGALN-----KAGQLT 455
IL +I +M +L + F F++ P + + LL LGA+ A +LT
Sbjct: 428 ILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLT 487
Query: 456 RVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQIYADNARM 515
+GRQ+++ P+DP+L++ ++ K+ C E + I + L + + RP DKQ +D
Sbjct: 488 PLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDP-RERPMDKQQASDEKHR 546
Query: 516 NFHLGDVGDRIALLRVYNCWRE------CNYSTEWCRENYIQVSSMKRARDIRDQL 565
FH + D +A + ++N E N CR +Y+ ++ +DI QL
Sbjct: 547 RFHDKE-SDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQL 601
>sp|Q14147|DHX34_HUMAN Probable ATP-dependent RNA helicase DHX34 OS=Homo sapiens GN=DHX34
PE=1 SV=2
Length = 1143
Score = 301 bits (772), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 192/546 (35%), Positives = 283/546 (51%), Gaps = 36/546 (6%)
Query: 54 LEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLY----------E 103
L LQ ER LPI + +LQ + + V+ + G+TG GK+TQ+PQYL +
Sbjct: 152 LAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSHVACTQ 211
Query: 104 PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLE 163
PR +A +S+A RV E + G +VGY IRFE S T + ++T +LLR+I EPSL
Sbjct: 212 PRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSLP 271
Query: 164 SYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKI 223
Y VLIVDE ER L D L G+L+ L+ RPDLK+++ SAT++ FS YF +AP+ ++
Sbjct: 272 QYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINISLFSSYFSNAPVVQV 331
Query: 224 PGRRYPVELFY---------TKAPEVDYIEAAIVTALQIHVNEP--TGDILVFLTGQDEI 272
PGR +P+ + Y +K+ ++D V H P GD+LVFL+G EI
Sbjct: 332 PGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLRVLESIDHKYPPEERGDLLVFLSGMAEI 391
Query: 273 ERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSL 332
E + + ++ P+++ L Q K+F+ P RK +L+TNIAETS+
Sbjct: 392 SAVLEA----AQTYASHTQRWVVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSV 447
Query: 333 TIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTLH 392
TIDGI++V+ G K SY+P+ ++ L IS+ASA QR G + RTGPG CFRLY
Sbjct: 448 TIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAES 507
Query: 393 NYHRIWMTILCQ----KYNELIWKMLSLFSNVLVNFDFIDPPLEEALLKAFELLYALGAL 448
+Y + + + L+ +M S+ F FI+PP +L A L GAL
Sbjct: 508 DYDAFAPYPVPEIRRVALDSLVLQMKSMSVGDPRTFPFIEPPPPASLETAILYLRDQGAL 567
Query: 449 NKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQI 508
+ + LT +G +A+ P+D + K ++ + + ++TIAA L V S F R
Sbjct: 568 DSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTIAAALSV-QSPFTRSAQSSP 626
Query: 509 YADNARMNFHLGDVGDRIALLRVYNCW-----RECNYSTEWCRENYIQVSSMKRARDIRD 563
AR D GD L V+N W S +WCR I+ + ++R
Sbjct: 627 ECAAARRPLE-SDQGDPFTLFNVFNAWVQVKSERSRNSRKWCRRRGIEEHRLYEMANLRR 685
Query: 564 QLEGLF 569
Q + L
Sbjct: 686 QFKELL 691
>sp|Q9DBV3|DHX34_MOUSE Probable ATP-dependent RNA helicase DHX34 OS=Mus musculus GN=Dhx34
PE=2 SV=2
Length = 1145
Score = 300 bits (767), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 188/547 (34%), Positives = 284/547 (51%), Gaps = 38/547 (6%)
Query: 54 LEMLQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLY----------E 103
L LQ ER LPI + +LQ + + V+ + G+TG GK+TQ+PQYL +
Sbjct: 154 LAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSHVACTQ 213
Query: 104 PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLE 163
PR +A +S+A RV E + G +VGY IRFE S T + ++T +LLR+I EPSL
Sbjct: 214 PRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSLP 273
Query: 164 SYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKI 223
Y VLIVDE ER L D L G+L+ L+ RPDLK+++ SAT++ FS YF AP+ ++
Sbjct: 274 QYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVILMSATINISLFSSYFSHAPVVQV 333
Query: 224 PGRRYPVELFYTKAPEVDYIEA--------AIVTALQIHVN----EPTGDILVFLTGQDE 271
PGR +P+ + Y + E D + + L+ N E GD+LVFL+G E
Sbjct: 334 PGRLFPITVVY-QPQEADQTASKSEKLDPRPFLRVLEAIDNKYPPEERGDLLVFLSGMAE 392
Query: 272 IERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAETS 331
I + + + ++ P+++ L Q K+F+ P RK +L+TNIAETS
Sbjct: 393 I----TTVLDAAQAYASLTQRWVVLPLHSALSVSDQDKVFDVAPAGVRKCILSTNIAETS 448
Query: 332 LTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYTL 391
+TIDGI++V+ G K SY+P+ ++ L IS+ASA QR G + RTGPG C+RLY
Sbjct: 449 VTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCYRLYAE 508
Query: 392 HNYHRIWMTILCQ----KYNELIWKMLSLFSNVLVNFDFIDPPLEEALLKAFELLYALGA 447
+Y + + + L+ +M S+ F FI+PP ++ A L GA
Sbjct: 509 SDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPASVETAILYLQEQGA 568
Query: 448 LNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKDKQ 507
L+ + LT +G +A+ P+D + K ++ + ++ ++TIAA L V S F R
Sbjct: 569 LDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLAEPVLTIAAALSV-QSPFTRSAQSN 627
Query: 508 IYADNARMNFHLGDVGDRIALLRVYNCW-----RECNYSTEWCRENYIQVSSMKRARDIR 562
+ AR D GD L V+N W S +WCR ++ + ++R
Sbjct: 628 LDCATARRPLE-SDQGDPFTLFNVFNAWVQVKSERSGNSRKWCRRRGVEEHRLYEMANLR 686
Query: 563 DQLEGLF 569
Q + L
Sbjct: 687 RQFKELL 693
>sp|Q9HDY4|YK16_SCHPO Putative ATP-dependent RNA helicase PB1A10.06c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAPB1A10.06c PE=3
SV=1
Length = 1183
Score = 293 bits (751), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 199/631 (31%), Positives = 313/631 (49%), Gaps = 121/631 (19%)
Query: 57 LQEERKTLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE------------- 103
+QE R LPI + +++ + V+ I G TGSGKTTQ+PQ+L+E
Sbjct: 391 IQESRLALPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEAGFSSPESENPGM 450
Query: 104 -----PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVI 158
PR VAA+S+A RVS+E+ +V Y IRF+ + T +K+MTD +LLRE+
Sbjct: 451 IAITQPRRVAAVSIAKRVSEEL-TGFSSKVSYQIRFDSTINPDTAIKFMTDGILLRELSS 509
Query: 159 EPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPD----------LKLLISSATLDA 208
+ L +YS +IVDEA ER+++TD L GLL ++ R + LKL+I SATL
Sbjct: 510 DFLLTAYSAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQKVKPLKLIIMSATLRV 569
Query: 209 EKFSD----YFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILV 264
FS+ + PI KI R+YPV + + + + DY++ A IH P G ILV
Sbjct: 570 TDFSENKLLFSVPPPIIKIDARQYPVSIHFNRTTKPDYLQDAFDKVCLIHKRLPAGSILV 629
Query: 265 FLTGQDEIERAEEILKQR----TRGLGTKIAELI-------------------------- 294
FLTGQ E+E+ ++L++R R L ++ ++
Sbjct: 630 FLTGQQEVEQLCQMLRKRFVRSFRPLKSRARIVVSRKTMSVENEDLQSETEDIDQVPTSS 689
Query: 295 --------------ICPIYANLPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYV 340
+ P+Y+ L TE Q K+F+ +PE R ++ATN+AETS+TI I+YV
Sbjct: 690 SSSVTYDDESEPMYVLPLYSLLTTEDQMKVFDSSPEGHRMCIVATNVAETSITIPNIRYV 749
Query: 341 IHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYT---------L 391
+ G AK + YN KT ++ V ISKA+A+QR G + RTGPG C+RLY+ L
Sbjct: 750 VDCGKAKERVYNEKTSVQKFEVRWISKANADQRAGRAGRTGPGHCYRLYSSAVFDSSFPL 809
Query: 392 HNYHRIWMTILCQKYNELIWKMLSLFSNVLVNFDFIDPPLEEALLKAFELLYALGALNKA 451
H+ I T + ++ +M ++ + + NF F P L K+ +LL LGA++
Sbjct: 810 HSLPEILRTPV----ESIVLQMKNMNIDNIANFPFPTSPGRSRLEKSLKLLSNLGAIDSE 865
Query: 452 GQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVG------NSIFYRPKD 505
G LT++G QM+ FP+ P+ SK ++ ++ C +I + + L + S+ Y D
Sbjct: 866 GVLTKLGEQMSLFPLSPRFSKMLIIGQQHGCLPYVIALVSALSINQLFVSKQSLLYDAHD 925
Query: 506 KQIYAD------------------------NARMNFHLGDV-GDRIALLRVYNCWRECNY 540
K ++ NA F D ++LL + +
Sbjct: 926 KNSRSEETDLIDDDEIKQKEEYKNRMRGYFNAISRFQAIDPDAPALSLLSAVCAYDYASD 985
Query: 541 STEWCRENYIQVSSMKRARDIRDQLEGLFAR 571
++C+ENY++ +++ ++R Q+ GL R
Sbjct: 986 KRKFCKENYLREKALEEVTNLRKQIIGLLKR 1016
>sp|Q8BZS9|DHX32_MOUSE Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
OS=Mus musculus GN=Dhx32 PE=2 SV=2
Length = 744
Score = 280 bits (716), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 186/557 (33%), Positives = 298/557 (53%), Gaps = 49/557 (8%)
Query: 57 LQEERKTLPI----YPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE--------- 103
L +ER+ LPI Y F E LLQ V+ + G++ GK++Q+PQ+ E
Sbjct: 55 LLKEREELPIWKEKYSFMESLLQN----QVVVVSGDSKCGKSSQVPQWCAEYCLSIHYQH 110
Query: 104 -------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREI 156
A+ +A RV+ EM V +GHEVGY I FE+C + +T+L+Y TD ML RE+
Sbjct: 111 GGVICTQAHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTETILRYCTDDMLQREM 170
Query: 157 VIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFG 216
+ P L SY V+I+D+ ER+L+TD L GLLKD++ RP+LKL+++ + L K S Y+G
Sbjct: 171 MSNPFLGSYGVIILDDVHERSLATDVLLGLLKDVLLARPELKLIVNCSPLLTSKLSSYYG 230
Query: 217 SAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAE 276
P+ ++ ++PVE+ Y + D E+ I +IH + GD++VFL + +IE+
Sbjct: 231 DVPVIEV-RNKHPVEVVYLSGAQKDSFESVIRLIFEIHRSGEKGDVVVFLACEQDIEKTY 289
Query: 277 EILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPER-------ARKVVLATNIAE 329
E++ Q L + +L++ P+Y P E + +F P E R+VVL T+ E
Sbjct: 290 ELVCQEGSNLNPDVGDLVVIPLY---PKE-KCSLFRPVDETEKRCQVYQRRVVLTTSCGE 345
Query: 330 TSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLY 389
+ + +K+VI G + + YNP+ SL++ PIS++ A R L + GK F LY
Sbjct: 346 SLIWSHTVKFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIRKQLLGSSPSGKLFCLY 405
Query: 390 TLHNYHRIWMTILCQKYNELIWKMLSLFSNV-----LVNFDFIDPPLEEALLKAFELLYA 444
T + + + E + LF L DF++ P E+L++A E L
Sbjct: 406 TEEFASKDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGRCDFMNRPAPESLMQALEDLDY 465
Query: 445 LGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPK 504
L AL+ G L+ G M+EFP+DP+LSK+I++ ++ C DE++TIAAM+ + + P
Sbjct: 466 LAALDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPSCFLHVPH 525
Query: 505 DKQIYADNARMNFHLGDVGDRIALLRVYNCWREC--NYSTE-----WCRENYIQVSSMKR 557
+ A F L GD L+ VYN +++ N + E WC + ++ S+++
Sbjct: 526 GAEEAAVTCWKTF-LHPEGDHFTLINVYNAYQDTVLNSANEHCVEMWCHDCFLSCSALRM 584
Query: 558 ARDIRDQLEGLFARVEI 574
A IR +L + R+E+
Sbjct: 585 ADVIRAELLEIIKRIEL 601
>sp|P0CE10|Y4102_ARATH Putative uncharacterized protein At4g01020, chloroplastic
OS=Arabidopsis thaliana GN=At4g01020 PE=4 SV=1
Length = 1787
Score = 277 bits (708), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 192/553 (34%), Positives = 291/553 (52%), Gaps = 48/553 (8%)
Query: 56 MLQEERK---TLPIYPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLY---------- 102
+L+E R+ LPIY + ++L+ + ++ ++GETGSGK+TQ+ Q+L
Sbjct: 292 ILRECRRLEDGLPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGVAASESI 351
Query: 103 ---EPRWVAAMSVAARVSQEM-GVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREIVI 158
+PR +AAM++ RV +E G + V + F + + YMTD LL+ +
Sbjct: 352 VCTQPRKIAAMTLTDRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMK 411
Query: 159 EPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFGSA 218
+ SL S +I+DEA ER+L+TD L LL+ L++ R DL+L+I SAT DA + S Y
Sbjct: 412 DRSLSGISCVIIDEAHERSLNTDLLLALLRKLLSRRIDLRLVIMSATADANQLSQYLFDC 471
Query: 219 PIFKIPGRRYPVELFYTKAPE---------VDYIEAAIVTALQIHVNEPTGDILVFLTGQ 269
I + GR +PVE+ Y+ + Y + A++IH E G IL FLT Q
Sbjct: 472 GILHVNGRNFPVEIVYSPSGTEENSVVGRIASYAGDVVKMAVEIHKTEKEGTILAFLTSQ 531
Query: 270 DEIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAE 329
E+E A E + I P++ L E Q +F+ P R RKV+ ATNIAE
Sbjct: 532 AEVEWACERFVAPS---------AIALPLHGKLSFEEQFMVFQNYPGR-RKVIFATNIAE 581
Query: 330 TSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLY 389
TSLTI G+KYVI G K Y P+TGM L V +S++SA QR G + RT PG+C+RLY
Sbjct: 582 TSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCQVSQSSARQRAGRAGRTEPGRCYRLY 641
Query: 390 TLHNYHRIWMT----ILCQKYNELIWKMLSLFSNVLVNFDFIDPPLEEALLKAFELLYAL 445
+ ++ + + I + +ML+L + + F+F+D P+ EA+ A + L L
Sbjct: 642 SKTDFDSMNLNQEPEIRRVHLGVALLRMLALGIDNIAAFEFVDAPVPEAIAMAIQNLVQL 701
Query: 446 GAL---NKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYR 502
GA+ N +LT+ G + + ++PKL K I+ +++ E I +AA++ +SIF R
Sbjct: 702 GAVVEKNGVLELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCR 761
Query: 503 PK--DKQIYADNARMNFHLGDVGDRIALLRVYNCWREC--NYSTEWCRENYIQVSSMKRA 558
D ++ AD ++ F D GD LL VY W + +WC EN + SM+R
Sbjct: 762 VGNFDDKMKADRLKVQF-CNDNGDLFTLLSVYKEWASLPRDRRNKWCWENSLNAKSMRRC 820
Query: 559 RDIRDQLEGLFAR 571
D +LE R
Sbjct: 821 EDTVKELEICIER 833
>sp|Q5XH12|DHX32_XENLA Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
OS=Xenopus laevis GN=dhx32 PE=2 SV=1
Length = 748
Score = 273 bits (699), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 188/586 (32%), Positives = 303/586 (51%), Gaps = 42/586 (7%)
Query: 24 VDFFSESVFDGDNFDEFESELPNKSVVKSTLEMLQEERKTLPIYPFWEELLQAVSGYPVL 83
+D S +GD ++ E + S L +ER+TLPI+ + L+ ++ ++
Sbjct: 24 LDVTDSSDVEGDELNDLELNPFDGLPYSSRFYKLLKERETLPIWKIKYDFLEHLAHNQIV 83
Query: 84 AIVGETGSGKTTQIPQYLYE----------------PRWVAAMSVAARVSQEMGVKLGHE 127
+ SGK++QIPQ+ E A+ +A RV+ EM V +GHE
Sbjct: 84 VVSAGPKSGKSSQIPQWCAEYCLAGHYQHGAVVCTQAHKQTAVWLAMRVADEMDVNIGHE 143
Query: 128 VGYSIRFEDCTSDKTVLKYMTDCMLLREIVIEPSLESYSVLIVDEAQERTLSTDNLFGLL 187
VGY + FE+C + +T+L+Y TD ML RE++ P L SY V+I+D+ ER +STD L L
Sbjct: 144 VGYIVPFENCCTSETILRYCTDEMLRREMMSNPLLSSYGVVIIDDVYERFVSTDVLLSFL 203
Query: 188 KDLINYRPDLKLLISSATLDAEKFSDYFGSAPIFKIPGRRYPVELFYTKAPEVDYIEAAI 247
K + RP+LK++I + + Y+G+AP+ + + VE YT + DY +A+
Sbjct: 204 KVIAVSRPELKVVIITCPSLSGTLVSYYGNAPLVEAEN-THSVESVYTTSLPRDYFHSAL 262
Query: 248 VTALQIHVNEPTGDILVFLTGQDEIERAEEILKQRTRGLGTKIAELIICPIYAN------ 301
+IH + GDI+VFL ++EI+RA E +KQ + ++ EL+ +Y +
Sbjct: 263 RLLFEIHHTKEKGDIVVFLACEEEIKRAYEHIKQEALHMNPELGELMPIALYPHQSISDY 322
Query: 302 LPTELQAKIFEPTPERARKVVLATNIAETSLTIDGIKYVIHPGFAKVKSYNPKTGMESLL 361
+P E ++ + + RKVVL T++ E+ + + I +VI G K K YN + ESL+
Sbjct: 323 IPYE---ELDDNSKNPKRKVVLTTSLGESLIWMKNIFFVIDVGIEKRKVYNTRIRAESLV 379
Query: 362 VNPISKASANQRTGLSERTGPGKCFRLYTLHNYHRIWMTILCQKYNELIWKMLSLFSNV- 420
PISK A R + + GK F LY H + L K E + LF
Sbjct: 380 TQPISKVRAKMRKHILSSSSEGKLFCLYPEDFAHEM-KPFLTAKVEECNLISMVLFLKRM 438
Query: 421 ----LVNFDFIDPPLEEALLKAFELLYALGALNKAGQLTRVGRQMAEFPIDPKLSKTIVS 476
L + DFI+ P E+L++A E L L AL+ G L+ G M+EFP+DP+LSK+I++
Sbjct: 439 DIAGLAHCDFINRPDPESLMQALEDLDYLAALDNDGNLSEFGIIMSEFPLDPQLSKSILA 498
Query: 477 LDKYKCSDEIITIAAMLFVGNS-IFYRPKDKQIYADNARMNFHLGDVGDRIALLRVYNCW 535
++ C DE++T+AAM+ N I P+ K++ FH GD L+ +YN +
Sbjct: 499 ACEFDCVDEMLTLAAMVTAPNCFIDLPPEAKELDLIGKGKFFH--PEGDHFTLINIYNEY 556
Query: 536 RE------CNYSTE-WCRENYIQVSSMKRARDIRDQLEGLFARVEI 574
+ Y E WC+ + + +++ AR IR++L + R+E+
Sbjct: 557 EQMKRNNASQYDVEKWCQNHCLSFVALEMARAIRNELLDIMRRIEL 602
>sp|Q7L7V1|DHX32_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
OS=Homo sapiens GN=DHX32 PE=1 SV=1
Length = 743
Score = 270 bits (690), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 186/557 (33%), Positives = 301/557 (54%), Gaps = 50/557 (8%)
Query: 57 LQEERKTLPI----YPFWEELLQAVSGYPVLAIVGETGSGKTTQIPQYL--------YEP 104
L +ER+ LPI Y F E LLQ ++ + G+ GK+ Q+PQ+ Y+
Sbjct: 55 LLKEREDLPIWKEKYSFMENLLQN----QIVIVSGDAKCGKSAQVPQWCAEYCLSIHYQH 110
Query: 105 RWVAAMSV--------AARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREI 156
V V A RV+ EM V +GHEVGY I FE+C +++T+L+Y TD ML RE+
Sbjct: 111 GGVICTQVHKQTVVQLALRVADEMDVNIGHEVGYVIPFENCCTNETILRYCTDDMLQREM 170
Query: 157 VIEPSLESYSVLIVDEAQERTLSTDNLFGLLKDLINYRPDLKLLISSATLDAEKFSDYFG 216
+ P L SY V+I+D+ ER+++TD L GLLKD++ RP+LKL+I+S+ K + Y+G
Sbjct: 171 MSNPFLGSYGVIILDDIHERSIATDVLLGLLKDVLLARPELKLIINSSPHLISKLNSYYG 230
Query: 217 SAPIFKIPGRRYPVELFYTKAPEVDYIEAAIVTALQIHVNEPTGDILVFLTGQDEIERAE 276
+ P+ ++ ++PVE+ Y + D E+ + +IH + GDI+VFL + +IE+
Sbjct: 231 NVPVIEV-KNKHPVEVVYLSEAQKDSFESILRLIFEIHHSGEKGDIVVFLACEQDIEKVC 289
Query: 277 EILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPER-------ARKVVLATNIAE 329
E + Q + L + EL++ P+Y P E + +F+P E R+VVL T+ E
Sbjct: 290 ETVYQGS-NLNPDLGELVVVPLY---PKE-KCSLFKPLDETEKRCQVYQRRVVLTTSSGE 344
Query: 330 TSLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLY 389
+ + +++VI G + K YNP+ SL++ PIS++ A R + + GK F LY
Sbjct: 345 FLIWSNSVRFVIDVGVERRKVYNPRIRANSLVMQPISQSQAEIRKQILGSSSSGKFFCLY 404
Query: 390 TLHNYHRIWMTILCQKYNELIWKMLSLFSNV-----LVNFDFIDPPLEEALLKAFELLYA 444
T + + + E + LF L + DF++ P E+L++A E L
Sbjct: 405 TEEFASKDMTPLKPAEMQEANLTSMVLFMKRIDIAGLGHCDFMNRPAPESLMQALEDLDY 464
Query: 445 LGALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPK 504
L AL+ G L+ G M+EFP+DP+LSK+I++ ++ C DE++TIAAM+ N + P
Sbjct: 465 LAALDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEVLTIAAMVTAPNCFSHVPH 524
Query: 505 DKQIYADNARMNFHLGDVGDRIALLRVYNCWREC--NYSTE-----WCRENYIQVSSMKR 557
+ A F L GD L+ +Y +++ N S+E WCR+ ++ S+++
Sbjct: 525 GAEEAALTCWKTF-LHPEGDHFTLISIYKAYQDTTLNSSSEYCVEKWCRDYFLNCSALRM 583
Query: 558 ARDIRDQLEGLFARVEI 574
A IR +L + R+E+
Sbjct: 584 ADVIRAELLEIIKRIEL 600
>sp|Q924H9|DQX1_MOUSE ATP-dependent RNA helicase DQX1 OS=Mus musculus GN=Dqx1 PE=2 SV=1
Length = 718
Score = 255 bits (652), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 178/553 (32%), Positives = 288/553 (52%), Gaps = 41/553 (7%)
Query: 57 LQEERKTLPIYP----FWEELLQAVSGYPVLAIVGETGSGKTTQIPQYLYE--------- 103
L E+R+ LPI+ F E L + +G V+ + G+ GSGK+TQIPQ+ E
Sbjct: 35 LLEQRRALPIWAARFLFLEHLESSPTG--VVLVSGDPGSGKSTQIPQWCAEFALARGFQT 92
Query: 104 -------PRWVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDCMLLREI 156
P +AAMS+A+RV+ EM + LGHE+GYSI EDCT T+L++ D + L+E+
Sbjct: 93 GQVTVTQPYPLAAMSLASRVADEMDLTLGHEIGYSIPQEDCTGPNTMLRFCWDRLFLQEV 152
Query: 157 VIEPSLESYSVLIVDEAQERTLSTDNLFGLLKD--LINYRPDLKLLISSATLDAEKFSDY 214
++SVLI+DEAQER++++D L GLL+D L N D ++++ + KF +
Sbjct: 153 ASTRGPGAWSVLILDEAQERSVASDLLQGLLRDTRLRNLPGDPRVVVVTDPALEPKFQAF 212
Query: 215 FGSAPIFKIPGRRYP---VELFYTKAPEVDYIEAAIVTALQI-HVNEPTGDILVFLTGQD 270
+G++PI ++P R P L Y D +EAA L++ E GD+LV+L ++
Sbjct: 213 WGNSPIVRVP--REPGGDPTLAYKDTVPTDLVEAACQAVLELCQQEEAPGDVLVYLPSEE 270
Query: 271 EIERAEEILKQRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPERARKVVLATNIAET 330
EI E L L + P++ +Q ++E T RK+V+ +A+
Sbjct: 271 EISLCCESLSGEMGTLAVPGPPPRVLPLHPGCAQAIQT-VYEDTDVSVRKIVVTHWLADF 329
Query: 331 SLTIDGIKYVIHPGFAKVKSYNPKTGMESLLVNPISKASANQRTGLSERTGPGKCFRLYT 390
S ++ I++VI G YNP+ ES ++ PISK A R ++ PG C RLY+
Sbjct: 330 SFSLPSIQHVIDSGLELRSVYNPRIRAESQVLRPISKCQAEARLLRAKGFPPGSCLRLYS 389
Query: 391 LHNYH----RIWMTILCQK-YNELIWKMLSLFSNVLVNFDFIDPPLEEALLKAFELLYAL 445
+ +C++ + L+ ++ F+D P EAL++A E L L
Sbjct: 390 KSTLELEAPPLPHPKVCEENLSSLVLLLMRKQIAEPGECHFLDRPAPEALMRALEDLDYL 449
Query: 446 GALNKAGQLTRVGRQMAEFPIDPKLSKTIVSLDKYKCSDEIITIAAMLFVGNSIFYRPKD 505
ALN G+L+ +G ++EFP+ P+L+K +++ ++ C DE++T+AAML F RP
Sbjct: 450 AALNDDGELSDLGVILSEFPLPPELAKALLASCEFNCVDEMLTLAAMLTAAPG-FTRPP- 507
Query: 506 KQIYADNARMNFHLGDV-GDRIALLRVYNCWRECNYSTEWCRENYIQVSSMKRARDIRDQ 564
+ A A + L GD +L++VY + + WC+ + S+ +AR +R +
Sbjct: 508 --LSAGEAALRRALEHADGDHSSLIQVYEAFVQSGADEAWCQARGLNWESLCQARKLRAE 565
Query: 565 LEGLFARVEIDTS 577
L L R+E+ S
Sbjct: 566 LVELMQRIELPLS 578
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 210,159,411
Number of Sequences: 539616
Number of extensions: 8766064
Number of successful extensions: 30037
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 29314
Number of HSP's gapped (non-prelim): 263
length of query: 582
length of database: 191,569,459
effective HSP length: 123
effective length of query: 459
effective length of database: 125,196,691
effective search space: 57465281169
effective search space used: 57465281169
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)