Query 037721
Match_columns 465
No_of_seqs 132 out of 1240
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 05:44:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037721.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037721hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 3.2E-64 1.1E-68 503.1 33.0 426 9-462 12-453 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 1.6E-58 5.3E-63 469.4 38.0 435 9-463 5-469 (480)
3 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 6.2E-59 2.1E-63 473.8 29.0 426 8-463 6-479 (482)
4 2c1x_A UDP-glucose flavonoid 3 100.0 2.3E-57 7.8E-62 457.9 33.3 429 6-463 3-452 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 1.1E-57 3.7E-62 461.5 30.8 425 8-462 7-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 2.7E-46 9.3E-51 375.7 33.4 402 8-463 10-422 (424)
7 4amg_A Snogd; transferase, pol 100.0 2E-45 6.7E-50 366.4 25.9 371 1-458 13-396 (400)
8 1iir_A Glycosyltransferase GTF 100.0 3.8E-42 1.3E-46 344.5 26.7 383 11-460 1-398 (415)
9 3rsc_A CALG2; TDP, enediyne, s 100.0 4.8E-41 1.6E-45 336.5 28.1 389 10-463 20-414 (415)
10 1rrv_A Glycosyltransferase GTF 100.0 1.7E-41 6E-46 339.8 24.2 378 11-457 1-395 (416)
11 3ia7_A CALG4; glycosysltransfe 100.0 2.7E-40 9.1E-45 329.4 30.2 392 10-463 4-399 (402)
12 3h4t_A Glycosyltransferase GTF 100.0 3.9E-40 1.3E-44 328.5 22.5 377 11-462 1-382 (404)
13 2iyf_A OLED, oleandomycin glyc 100.0 3.7E-39 1.3E-43 324.3 27.8 388 8-460 5-397 (430)
14 2yjn_A ERYCIII, glycosyltransf 100.0 8.7E-39 3E-43 322.6 25.1 387 10-462 20-435 (441)
15 2p6p_A Glycosyl transferase; X 100.0 1.4E-38 4.7E-43 315.3 24.6 363 11-461 1-378 (384)
16 4fzr_A SSFS6; structural genom 100.0 3E-36 1E-40 300.0 22.4 366 7-457 12-395 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 5.1E-35 1.7E-39 291.1 30.3 357 9-460 19-395 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 5.6E-35 1.9E-39 290.0 25.5 367 10-462 1-388 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 1.3E-32 4.4E-37 274.9 29.1 379 8-463 18-409 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 7E-29 2.4E-33 243.4 25.3 337 11-458 3-352 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 1.5E-27 5.2E-32 208.2 14.6 164 255-446 6-170 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.8 2.8E-19 9.4E-24 175.0 26.2 337 11-463 7-356 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.7 1.6E-15 5.6E-20 141.4 20.7 263 12-403 2-275 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.6 1.9E-15 6.6E-20 135.2 9.8 140 268-421 26-196 (224)
25 1v4v_A UDP-N-acetylglucosamine 99.3 9.8E-11 3.4E-15 114.6 21.6 86 333-439 255-343 (376)
26 3c48_A Predicted glycosyltrans 99.3 2.8E-10 9.6E-15 113.7 23.8 336 8-423 18-390 (438)
27 2gek_A Phosphatidylinositol ma 99.3 2.5E-09 8.5E-14 105.5 27.8 342 10-463 20-382 (406)
28 3okp_A GDP-mannose-dependent a 99.3 2E-09 7E-14 105.5 26.6 346 9-464 3-379 (394)
29 3ot5_A UDP-N-acetylglucosamine 99.3 2.6E-10 9E-15 112.6 20.1 107 333-460 282-391 (403)
30 3dzc_A UDP-N-acetylglucosamine 99.3 4.9E-11 1.7E-15 117.7 14.6 87 332-439 287-376 (396)
31 1vgv_A UDP-N-acetylglucosamine 99.3 2.5E-10 8.6E-15 111.9 19.2 138 269-438 204-350 (384)
32 3fro_A GLGA glycogen synthase; 99.2 1.9E-09 6.4E-14 107.4 25.3 165 272-464 252-430 (439)
33 2jjm_A Glycosyl transferase, g 99.2 4.9E-09 1.7E-13 103.2 27.9 353 10-464 15-385 (394)
34 2r60_A Glycosyl transferase, g 99.2 3.1E-09 1.1E-13 108.1 21.9 79 332-423 334-423 (499)
35 2iuy_A Avigt4, glycosyltransfe 99.1 3.4E-09 1.2E-13 102.2 20.1 125 273-423 164-307 (342)
36 3beo_A UDP-N-acetylglucosamine 99.1 9.3E-09 3.2E-13 100.3 21.9 84 333-437 263-349 (375)
37 2iw1_A Lipopolysaccharide core 99.1 9E-09 3.1E-13 100.2 21.8 79 333-423 253-336 (374)
38 2x6q_A Trehalose-synthase TRET 99.0 2E-07 6.9E-12 92.2 28.9 168 272-464 232-414 (416)
39 4hwg_A UDP-N-acetylglucosamine 99.0 2.1E-09 7.2E-14 105.3 11.4 316 10-423 9-341 (385)
40 1rzu_A Glycogen synthase 1; gl 98.6 1.1E-06 3.8E-11 88.7 18.8 163 272-463 292-474 (485)
41 3s28_A Sucrose synthase 1; gly 98.6 2.8E-06 9.7E-11 90.2 21.7 78 332-422 639-728 (816)
42 2qzs_A Glycogen synthase; glyc 98.6 5.5E-06 1.9E-10 83.6 21.5 162 272-463 293-475 (485)
43 3oy2_A Glycosyltransferase B73 98.5 2.9E-05 9.9E-10 76.4 23.1 110 335-464 256-390 (413)
44 2vsy_A XCC0866; transferase, g 98.4 0.0005 1.7E-08 70.6 32.7 114 333-462 434-557 (568)
45 2f9f_A First mannosyl transfer 98.4 1.6E-06 5.4E-11 75.0 10.1 127 272-423 24-161 (177)
46 2hy7_A Glucuronosyltransferase 98.3 7.7E-05 2.6E-09 73.4 21.3 72 333-423 265-351 (406)
47 2xci_A KDO-transferase, 3-deox 98.2 0.00023 7.8E-09 69.2 21.1 96 334-443 261-362 (374)
48 3vue_A GBSS-I, granule-bound s 97.9 0.0016 5.3E-08 66.4 22.2 135 272-423 328-476 (536)
49 4gyw_A UDP-N-acetylglucosamine 97.5 0.0017 5.8E-08 68.6 16.0 139 269-423 521-667 (723)
50 2bfw_A GLGA glycogen synthase; 97.5 0.0021 7.1E-08 55.9 13.7 76 334-423 96-179 (200)
51 3rhz_A GTF3, nucleotide sugar 97.3 0.00078 2.7E-08 64.3 10.0 110 334-460 215-336 (339)
52 3qhp_A Type 1 capsular polysac 97.3 0.0011 3.8E-08 55.8 9.9 75 334-423 57-139 (166)
53 3q3e_A HMW1C-like glycosyltran 97.3 0.0024 8.1E-08 65.1 13.2 146 270-437 440-595 (631)
54 3tov_A Glycosyl transferase fa 96.8 0.03 1E-06 53.5 15.6 106 8-140 6-115 (349)
55 1psw_A ADP-heptose LPS heptosy 96.7 0.025 8.5E-07 53.8 14.2 102 11-140 1-106 (348)
56 2x0d_A WSAF; GT4 family, trans 95.9 0.047 1.6E-06 53.5 11.4 84 333-436 295-385 (413)
57 2gt1_A Lipopolysaccharide hept 95.3 0.18 6.2E-06 47.3 12.6 45 11-55 1-47 (326)
58 3ty2_A 5'-nucleotidase SURE; s 93.5 0.25 8.4E-06 44.4 8.3 114 8-143 9-135 (261)
59 2phj_A 5'-nucleotidase SURE; S 91.2 0.73 2.5E-05 41.2 8.3 113 11-143 2-127 (251)
60 2wqk_A 5'-nucleotidase SURE; S 90.3 0.85 2.9E-05 40.9 7.9 112 12-143 3-127 (251)
61 1g5t_A COB(I)alamin adenosyltr 89.4 4.6 0.00016 34.6 11.5 98 9-123 27-130 (196)
62 2v4n_A Multifunctional protein 87.6 2.1 7E-05 38.4 8.4 111 11-143 2-126 (254)
63 3nb0_A Glycogen [starch] synth 86.3 6.1 0.00021 40.8 12.0 41 337-379 497-550 (725)
64 1l5x_A SurviVal protein E; str 84.2 2.5 8.4E-05 38.5 7.2 112 12-143 2-127 (280)
65 1j9j_A Stationary phase surviV 83.9 2.3 7.8E-05 37.9 6.8 114 12-143 2-128 (247)
66 3t5t_A Putative glycosyltransf 82.1 13 0.00043 36.9 12.0 110 334-463 353-472 (496)
67 2e6c_A 5'-nucleotidase SURE; S 81.8 5.8 0.0002 35.2 8.6 114 12-143 2-129 (244)
68 3ug7_A Arsenical pump-driving 77.8 8.9 0.00031 36.1 9.1 41 10-50 25-66 (349)
69 2x0d_A WSAF; GT4 family, trans 75.9 1.6 5.6E-05 42.3 3.4 41 8-48 44-89 (413)
70 2bw0_A 10-FTHFDH, 10-formyltet 75.5 11 0.00038 35.2 8.8 103 8-145 20-131 (329)
71 2ywr_A Phosphoribosylglycinami 73.5 26 0.00088 30.3 10.2 103 11-144 2-111 (216)
72 1ccw_A Protein (glutamate muta 72.3 5.8 0.0002 31.7 5.3 39 9-47 2-40 (137)
73 1mvl_A PPC decarboxylase athal 70.3 5.6 0.00019 34.4 5.1 48 7-56 16-63 (209)
74 4dzz_A Plasmid partitioning pr 69.9 25 0.00086 29.5 9.4 39 13-51 4-43 (206)
75 3iqw_A Tail-anchored protein t 69.6 13 0.00045 34.7 8.0 42 11-52 16-58 (334)
76 3dfz_A SIRC, precorrin-2 dehyd 68.5 32 0.0011 29.9 9.7 152 263-447 26-186 (223)
77 3q0i_A Methionyl-tRNA formyltr 67.2 45 0.0015 30.8 10.9 36 8-48 5-40 (318)
78 4b4k_A N5-carboxyaminoimidazol 66.8 40 0.0014 28.0 9.2 142 270-446 22-172 (181)
79 3qjg_A Epidermin biosynthesis 66.2 7.5 0.00026 32.6 4.9 44 11-55 6-49 (175)
80 1uqt_A Alpha, alpha-trehalose- 65.7 24 0.00081 34.8 9.3 108 335-463 333-453 (482)
81 3auf_A Glycinamide ribonucleot 65.0 31 0.0011 30.1 8.9 103 10-143 22-131 (229)
82 3zqu_A Probable aromatic acid 64.5 5.7 0.00019 34.4 3.9 45 10-55 4-48 (209)
83 2q6t_A DNAB replication FORK h 63.9 21 0.00071 34.8 8.4 41 12-52 202-243 (444)
84 2vo1_A CTP synthase 1; pyrimid 63.9 7.5 0.00026 34.8 4.5 47 2-48 14-63 (295)
85 3da8_A Probable 5'-phosphoribo 62.3 22 0.00075 30.8 7.3 106 7-143 9-119 (215)
86 2yxb_A Coenzyme B12-dependent 62.1 8.4 0.00029 31.7 4.4 42 8-49 16-57 (161)
87 3tqr_A Phosphoribosylglycinami 61.8 19 0.00063 31.3 6.7 105 9-144 4-114 (215)
88 4ds3_A Phosphoribosylglycinami 61.7 40 0.0014 29.0 8.8 106 7-143 4-116 (209)
89 1fmt_A Methionyl-tRNA FMet for 61.2 28 0.00095 32.2 8.3 34 9-47 2-35 (314)
90 3trh_A Phosphoribosylaminoimid 61.2 48 0.0017 27.3 8.6 142 270-446 6-156 (169)
91 2iz6_A Molybdenum cofactor car 60.6 17 0.00059 30.4 6.1 78 336-423 92-173 (176)
92 3tqq_A Methionyl-tRNA formyltr 60.0 48 0.0016 30.5 9.7 34 10-48 2-35 (314)
93 1y80_A Predicted cobalamin bin 59.5 12 0.00042 32.1 5.3 43 9-51 87-129 (210)
94 3rg8_A Phosphoribosylaminoimid 58.8 73 0.0025 26.0 9.5 138 271-445 3-147 (159)
95 1xmp_A PURE, phosphoribosylami 58.2 71 0.0024 26.3 9.1 142 270-446 11-161 (170)
96 1sbz_A Probable aromatic acid 58.2 7.9 0.00027 33.1 3.7 44 11-55 1-45 (197)
97 3lqk_A Dipicolinate synthase s 57.8 12 0.00041 32.1 4.8 46 9-55 6-52 (201)
98 3igf_A ALL4481 protein; two-do 57.6 7.8 0.00027 36.9 3.9 39 12-51 3-42 (374)
99 2r8r_A Sensor protein; KDPD, P 57.4 17 0.00058 31.8 5.7 41 8-48 4-44 (228)
100 2i2x_B MTAC, methyltransferase 57.4 16 0.00054 32.7 5.7 40 8-47 121-160 (258)
101 3rfo_A Methionyl-tRNA formyltr 57.3 62 0.0021 29.8 9.9 36 9-49 3-38 (317)
102 3av3_A Phosphoribosylglycinami 56.3 53 0.0018 28.2 8.8 102 11-143 4-112 (212)
103 1p3y_1 MRSD protein; flavoprot 55.9 5.8 0.0002 33.9 2.4 46 9-55 7-52 (194)
104 1o4v_A Phosphoribosylaminoimid 55.8 85 0.0029 26.2 9.3 140 270-446 13-161 (183)
105 1jkx_A GART;, phosphoribosylgl 54.9 93 0.0032 26.7 10.1 101 12-143 2-109 (212)
106 1u11_A PURE (N5-carboxyaminoim 54.6 67 0.0023 26.8 8.5 141 270-446 21-171 (182)
107 2ejb_A Probable aromatic acid 53.5 13 0.00045 31.5 4.2 44 11-55 2-45 (189)
108 4grd_A N5-CAIR mutase, phospho 53.5 60 0.002 26.8 7.9 142 270-446 12-162 (173)
109 2ixd_A LMBE-related protein; h 53.4 31 0.0011 30.4 6.9 20 101-120 85-104 (242)
110 3ezx_A MMCP 1, monomethylamine 52.9 20 0.00069 31.0 5.5 45 8-52 90-134 (215)
111 1g63_A Epidermin modifying enz 52.4 12 0.0004 31.6 3.7 43 12-55 4-46 (181)
112 3mcu_A Dipicolinate synthase, 50.9 15 0.00051 31.6 4.2 43 10-53 5-48 (207)
113 3ors_A N5-carboxyaminoimidazol 50.3 76 0.0026 25.9 8.1 140 271-446 4-153 (163)
114 3vot_A L-amino acid ligase, BL 50.0 26 0.0009 33.6 6.5 96 9-138 4-101 (425)
115 3da8_A Probable 5'-phosphoribo 49.8 1.1E+02 0.0037 26.3 9.6 115 289-441 79-195 (215)
116 1u0t_A Inorganic polyphosphate 49.8 16 0.00055 33.6 4.6 31 347-379 73-107 (307)
117 3lp6_A Phosphoribosylaminoimid 49.8 1.1E+02 0.0037 25.3 11.0 141 270-446 7-155 (174)
118 1qzu_A Hypothetical protein MD 49.6 15 0.00053 31.6 4.1 48 8-56 17-65 (206)
119 3obi_A Formyltetrahydrofolate 49.4 62 0.0021 29.4 8.4 104 288-422 155-260 (288)
120 3o1l_A Formyltetrahydrofolate 49.4 84 0.0029 28.7 9.3 106 286-422 168-275 (302)
121 3nrb_A Formyltetrahydrofolate 49.4 59 0.002 29.5 8.2 104 288-422 154-259 (287)
122 1id1_A Putative potassium chan 49.2 14 0.00049 29.6 3.8 33 10-47 3-35 (153)
123 3kuu_A Phosphoribosylaminoimid 49.0 91 0.0031 25.8 8.4 143 270-446 12-162 (174)
124 4dim_A Phosphoribosylglycinami 48.0 33 0.0011 32.6 6.8 89 8-137 5-97 (403)
125 3kcq_A Phosphoribosylglycinami 47.7 42 0.0014 29.0 6.6 99 9-143 7-112 (215)
126 1meo_A Phosophoribosylglycinam 47.4 1.3E+02 0.0046 25.6 9.9 102 289-421 69-172 (209)
127 2bln_A Protein YFBG; transfera 47.1 1.2E+02 0.004 27.7 10.0 94 11-144 1-106 (305)
128 3tqr_A Phosphoribosylglycinami 46.6 82 0.0028 27.1 8.3 102 289-421 73-176 (215)
129 3tov_A Glycosyl transferase fa 46.6 55 0.0019 30.5 7.9 100 10-144 185-289 (349)
130 3kcq_A Phosphoribosylglycinami 46.2 86 0.0029 27.0 8.4 102 289-421 72-175 (215)
131 3mc3_A DSRE/DSRF-like family p 46.1 40 0.0014 26.5 5.9 44 11-54 16-62 (134)
132 3lou_A Formyltetrahydrofolate 46.0 76 0.0026 28.8 8.4 103 289-422 161-265 (292)
133 3n0v_A Formyltetrahydrofolate 46.0 81 0.0028 28.5 8.6 104 288-422 155-260 (286)
134 3pdi_B Nitrogenase MOFE cofact 45.9 48 0.0016 32.4 7.6 34 104-141 366-399 (458)
135 3o1l_A Formyltetrahydrofolate 45.8 1E+02 0.0036 28.1 9.3 105 8-144 103-212 (302)
136 3l7i_A Teichoic acid biosynthe 45.2 18 0.00062 37.8 4.7 111 337-462 603-719 (729)
137 2yvq_A Carbamoyl-phosphate syn 45.0 19 0.00064 28.9 3.7 97 14-141 27-131 (143)
138 2qs7_A Uncharacterized protein 44.8 30 0.001 27.7 4.9 46 10-55 8-53 (144)
139 1meo_A Phosophoribosylglycinam 44.3 1E+02 0.0035 26.3 8.6 101 12-143 2-109 (209)
140 4ds3_A Phosphoribosylglycinami 43.8 99 0.0034 26.5 8.4 102 289-421 76-179 (209)
141 3l4e_A Uncharacterized peptida 42.8 28 0.00096 29.9 4.7 43 263-305 21-63 (206)
142 3auf_A Glycinamide ribonucleot 42.4 1.2E+02 0.0041 26.3 8.9 102 289-421 91-194 (229)
143 2g1u_A Hypothetical protein TM 41.9 27 0.00093 28.0 4.4 36 8-48 17-52 (155)
144 3av3_A Phosphoribosylglycinami 40.9 1.5E+02 0.0051 25.3 9.2 106 285-421 67-175 (212)
145 2gk4_A Conserved hypothetical 40.4 58 0.002 28.5 6.4 26 21-48 28-53 (232)
146 3qua_A Putative uncharacterize 40.3 1.6E+02 0.0054 25.0 9.0 44 335-379 101-155 (199)
147 3p9x_A Phosphoribosylglycinami 40.1 1.2E+02 0.0041 26.0 8.3 102 289-421 71-174 (211)
148 3zzm_A Bifunctional purine bio 40.1 40 0.0014 33.1 5.7 99 10-122 9-111 (523)
149 1jkx_A GART;, phosphoribosylgl 39.6 1.3E+02 0.0045 25.7 8.6 102 289-421 69-172 (212)
150 2pn1_A Carbamoylphosphate synt 39.6 1.5E+02 0.0052 26.8 9.8 35 8-48 2-38 (331)
151 1kjn_A MTH0777; hypotethical p 39.3 29 0.00099 27.9 3.8 46 11-56 7-54 (157)
152 2a3d_A Protein (de novo three- 39.3 36 0.0012 22.0 3.6 29 431-459 5-33 (73)
153 3zq6_A Putative arsenical pump 39.0 36 0.0012 31.4 5.2 38 12-49 15-53 (324)
154 2ywr_A Phosphoribosylglycinami 38.4 1.5E+02 0.005 25.4 8.8 102 289-421 70-173 (216)
155 1p9o_A Phosphopantothenoylcyst 37.9 21 0.00073 32.9 3.3 24 26-49 67-90 (313)
156 3lrx_A Putative hydrogenase; a 37.7 26 0.0009 28.4 3.6 37 10-49 23-59 (158)
157 2bon_A Lipid kinase; DAG kinas 37.2 49 0.0017 30.6 5.9 29 349-379 82-118 (332)
158 2pju_A Propionate catabolism o 37.2 51 0.0018 28.7 5.6 66 350-423 64-152 (225)
159 3hr8_A Protein RECA; alpha and 37.1 96 0.0033 29.0 7.9 39 13-51 64-102 (356)
160 2qv7_A Diacylglycerol kinase D 37.1 33 0.0011 31.9 4.6 28 350-379 81-114 (337)
161 3oow_A Phosphoribosylaminoimid 36.9 1.7E+02 0.0059 23.9 10.9 143 270-446 5-155 (166)
162 2an1_A Putative kinase; struct 36.9 20 0.00068 32.6 3.0 30 347-378 61-94 (292)
163 1pjq_A CYSG, siroheme synthase 36.8 3E+02 0.01 26.6 12.3 152 263-447 7-168 (457)
164 2i2c_A Probable inorganic poly 36.2 15 0.0005 33.2 1.9 51 350-423 36-92 (272)
165 3kjh_A CO dehydrogenase/acetyl 36.1 27 0.00092 30.4 3.7 38 11-48 1-38 (254)
166 3n0v_A Formyltetrahydrofolate 35.9 1.1E+02 0.0038 27.6 7.8 105 8-144 88-197 (286)
167 1qkk_A DCTD, C4-dicarboxylate 35.7 1.3E+02 0.0044 23.3 7.7 60 370-442 74-133 (155)
168 3s40_A Diacylglycerol kinase; 35.5 30 0.001 31.6 4.1 80 272-379 12-97 (304)
169 3fwz_A Inner membrane protein 35.5 30 0.001 27.2 3.5 35 9-48 6-40 (140)
170 3hn2_A 2-dehydropantoate 2-red 34.5 49 0.0017 30.2 5.4 41 11-57 3-43 (312)
171 3i83_A 2-dehydropantoate 2-red 34.4 48 0.0016 30.4 5.3 46 11-67 3-48 (320)
172 3lou_A Formyltetrahydrofolate 34.2 1.6E+02 0.0055 26.6 8.6 105 8-144 93-202 (292)
173 3nrb_A Formyltetrahydrofolate 34.1 1.8E+02 0.0062 26.2 8.9 105 8-144 86-196 (287)
174 1yt5_A Inorganic polyphosphate 34.0 16 0.00053 32.7 1.7 52 349-423 41-95 (258)
175 4ep4_A Crossover junction endo 33.5 40 0.0014 27.8 4.0 46 100-146 50-110 (166)
176 1b93_A Protein (methylglyoxal 33.3 53 0.0018 26.6 4.6 95 11-141 12-119 (152)
177 4gi5_A Quinone reductase; prot 33.1 65 0.0022 29.0 5.8 41 5-45 17-60 (280)
178 3eag_A UDP-N-acetylmuramate:L- 32.8 44 0.0015 30.8 4.8 44 10-57 4-50 (326)
179 2q5c_A NTRC family transcripti 32.5 39 0.0013 28.7 4.0 30 351-381 51-80 (196)
180 1jx7_A Hypothetical protein YC 31.9 56 0.0019 24.5 4.5 34 20-53 14-49 (117)
181 1p3y_1 MRSD protein; flavoprot 31.5 1.7E+02 0.0058 24.6 7.8 55 368-423 112-185 (194)
182 3ghy_A Ketopantoate reductase 30.6 29 0.00099 32.2 3.1 43 10-57 3-45 (335)
183 3lyu_A Putative hydrogenase; t 30.5 54 0.0018 26.0 4.3 35 10-47 18-52 (142)
184 3gi1_A LBP, laminin-binding pr 30.4 1E+02 0.0035 27.8 6.7 78 39-142 179-258 (286)
185 1hjr_A Holliday junction resol 30.3 57 0.002 26.6 4.4 46 100-146 46-106 (158)
186 3obi_A Formyltetrahydrofolate 30.2 1E+02 0.0035 27.9 6.5 105 8-144 87-197 (288)
187 2jk1_A HUPR, hydrogenase trans 30.1 1.8E+02 0.006 21.9 7.6 48 370-423 71-118 (139)
188 3hwr_A 2-dehydropantoate 2-red 29.7 32 0.0011 31.7 3.2 43 10-57 19-61 (318)
189 1z7e_A Protein aRNA; rossmann 28.8 93 0.0032 31.8 6.8 94 11-144 1-106 (660)
190 1pno_A NAD(P) transhydrogenase 28.8 58 0.002 26.7 4.0 37 11-47 24-63 (180)
191 3l6d_A Putative oxidoreductase 28.6 34 0.0011 31.3 3.1 37 4-45 3-39 (306)
192 1d4o_A NADP(H) transhydrogenas 28.3 59 0.002 26.7 4.0 37 11-47 23-62 (184)
193 2lpm_A Two-component response 28.2 24 0.00083 27.4 1.7 39 104-143 44-87 (123)
194 3ip0_A 2-amino-4-hydroxy-6-hyd 27.7 60 0.0021 26.5 4.1 27 272-298 2-28 (158)
195 1eiw_A Hypothetical protein MT 27.5 72 0.0025 24.2 4.3 65 347-423 36-109 (111)
196 2h31_A Multifunctional protein 27.4 4.2E+02 0.014 25.4 10.8 137 270-445 265-410 (425)
197 3s2u_A UDP-N-acetylglucosamine 27.3 84 0.0029 29.3 5.7 27 349-377 92-121 (365)
198 1lss_A TRK system potassium up 27.0 48 0.0017 25.5 3.5 33 10-47 4-36 (140)
199 2vqe_B 30S ribosomal protein S 26.8 1.1E+02 0.0037 27.2 5.9 33 113-146 158-192 (256)
200 4g6h_A Rotenone-insensitive NA 26.5 44 0.0015 33.0 3.7 36 8-48 40-75 (502)
201 2c5m_A CTP synthase; cytidine 26.5 59 0.002 28.9 4.0 39 9-47 21-62 (294)
202 3bul_A Methionine synthase; tr 26.3 70 0.0024 32.2 5.1 43 9-51 97-139 (579)
203 3qrx_B Melittin; calcium-bindi 26.3 17 0.00058 19.1 0.3 17 360-376 1-17 (26)
204 3ahc_A Phosphoketolase, xylulo 26.0 6E+02 0.021 26.8 12.2 55 355-423 727-786 (845)
205 2hy5_B Intracellular sulfur ox 25.9 77 0.0026 25.0 4.4 44 8-52 5-50 (136)
206 2fsv_C NAD(P) transhydrogenase 25.9 67 0.0023 27.0 4.0 37 11-47 47-86 (203)
207 1fmt_A Methionyl-tRNA FMet for 25.9 3E+02 0.01 25.0 9.1 114 290-441 72-187 (314)
208 4hb9_A Similarities with proba 25.7 47 0.0016 31.2 3.7 29 11-44 2-30 (412)
209 2qx0_A 7,8-dihydro-6-hydroxyme 25.6 97 0.0033 25.2 5.0 28 272-299 3-30 (159)
210 1f9y_A HPPK, protein (6-hydrox 25.4 76 0.0026 25.9 4.3 27 272-298 2-28 (158)
211 1djl_A Transhydrogenase DIII; 25.4 69 0.0024 27.0 4.0 37 11-47 46-85 (207)
212 3he5_B Synzip2; heterodimeric 24.9 1E+02 0.0035 18.5 3.6 7 415-421 9-15 (52)
213 2hy5_A Putative sulfurtransfer 24.7 1E+02 0.0035 23.8 4.9 32 22-53 15-47 (130)
214 3dm5_A SRP54, signal recogniti 24.6 93 0.0032 30.1 5.5 42 10-51 100-141 (443)
215 3q9l_A Septum site-determining 24.4 76 0.0026 27.6 4.6 32 17-48 10-41 (260)
216 2l82_A Designed protein OR32; 24.4 1.4E+02 0.0048 22.2 5.1 34 272-309 3-36 (162)
217 1vmd_A MGS, methylglyoxal synt 24.3 61 0.0021 27.0 3.5 87 22-142 37-136 (178)
218 1ryi_A Glycine oxidase; flavop 24.3 47 0.0016 31.0 3.3 37 6-47 13-49 (382)
219 1fy2_A Aspartyl dipeptidase; s 24.2 1.3E+02 0.0045 25.9 6.0 46 257-304 21-66 (229)
220 3bbn_B Ribosomal protein S2; s 24.2 1.1E+02 0.0039 26.6 5.4 31 113-144 157-189 (231)
221 2gkg_A Response regulator homo 24.1 1.1E+02 0.0036 22.5 4.9 47 369-423 78-124 (127)
222 3sz8_A 2-dehydro-3-deoxyphosph 23.9 3.8E+02 0.013 24.1 9.0 54 368-422 192-270 (285)
223 1zi8_A Carboxymethylenebutenol 23.8 1.2E+02 0.004 25.3 5.6 35 11-45 28-62 (236)
224 2a33_A Hypothetical protein; s 23.8 3.3E+02 0.011 23.2 8.4 45 335-379 93-147 (215)
225 3qbc_A 2-amino-4-hydroxy-6-hyd 23.8 90 0.0031 25.5 4.4 27 272-298 6-32 (161)
226 2vrn_A Protease I, DR1199; cys 23.6 1.7E+02 0.0059 24.0 6.5 42 6-48 5-46 (190)
227 1ydh_A AT5G11950; structural g 23.4 3.5E+02 0.012 23.1 11.5 82 334-422 88-188 (216)
228 4ao6_A Esterase; hydrolase, th 23.3 72 0.0025 27.9 4.2 39 10-48 55-95 (259)
229 3f67_A Putative dienelactone h 23.2 1.1E+02 0.0037 25.6 5.4 36 11-46 32-67 (241)
230 3qjg_A Epidermin biosynthesis 23.0 3.2E+02 0.011 22.5 8.4 115 270-399 6-144 (175)
231 2bru_C NAD(P) transhydrogenase 22.8 65 0.0022 26.5 3.3 37 11-47 31-70 (186)
232 3g0o_A 3-hydroxyisobutyrate de 22.6 52 0.0018 29.9 3.1 35 8-47 5-39 (303)
233 1cbk_A Protein (7,8-dihydro-6- 22.5 93 0.0032 25.4 4.3 27 272-298 3-29 (160)
234 1ny5_A Transcriptional regulat 22.4 4.2E+02 0.014 24.7 9.7 82 369-463 70-155 (387)
235 4dll_A 2-hydroxy-3-oxopropiona 22.3 97 0.0033 28.3 5.0 34 9-47 30-63 (320)
236 2x5n_A SPRPN10, 26S proteasome 22.2 1.6E+02 0.0054 24.6 5.9 60 10-69 106-171 (192)
237 3llv_A Exopolyphosphatase-rela 22.1 55 0.0019 25.5 2.9 32 11-47 7-38 (141)
238 3tqq_A Methionyl-tRNA formyltr 22.0 3.8E+02 0.013 24.3 9.0 101 290-421 71-173 (314)
239 3afo_A NADH kinase POS5; alpha 21.7 47 0.0016 31.6 2.7 35 343-379 108-147 (388)
240 3q0i_A Methionyl-tRNA formyltr 21.6 3.3E+02 0.011 24.9 8.4 101 290-421 76-178 (318)
241 4e5v_A Putative THUA-like prot 21.5 1.1E+02 0.0037 27.6 5.0 39 8-47 2-43 (281)
242 1o97_C Electron transferring f 21.3 61 0.0021 29.0 3.2 40 103-143 102-147 (264)
243 3pfb_A Cinnamoyl esterase; alp 21.3 1.3E+02 0.0044 25.6 5.6 37 11-47 46-84 (270)
244 2l2q_A PTS system, cellobiose- 21.2 1.2E+02 0.0042 22.6 4.5 34 10-43 4-37 (109)
245 2wm1_A 2-amino-3-carboxymucona 21.0 91 0.0031 28.5 4.6 69 235-308 106-177 (336)
246 1tvm_A PTS system, galactitol- 20.9 1.8E+02 0.006 21.9 5.4 38 8-45 19-57 (113)
247 2r85_A PURP protein PF1517; AT 20.8 79 0.0027 28.8 4.1 33 11-49 3-35 (334)
248 2xw6_A MGS, methylglyoxal synt 20.6 36 0.0012 26.9 1.4 97 11-143 4-113 (134)
249 3dfu_A Uncharacterized protein 20.3 70 0.0024 27.9 3.3 34 9-47 5-38 (232)
250 3sbx_A Putative uncharacterize 20.2 3.8E+02 0.013 22.3 8.2 119 267-395 10-164 (189)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=3.2e-64 Score=503.15 Aligned_cols=426 Identities=24% Similarity=0.300 Sum_probs=328.4
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCC--CEEEEEeCCCChhhhhccc-CCCCCeeEEEccCCCCCCCCCCCCCCCC
Q 037721 9 DQLHVVMFPWFAFGHISPFVQLSNKLSLHG--VKVSFFSAPGNIPRIKSSL-NLTPMADIIPLQIPHVDGLPPGLDSTSE 85 (465)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~rG--h~V~~~~~~~~~~~i~~~g-~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 85 (465)
++.||+++|+|++||++|++.||+.|++|| +.|||++++.+...+.+.. ...++++|..+| ++++.+.+...+
T Consensus 12 ~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ip----dglp~~~~~~~~ 87 (454)
T 3hbf_A 12 NLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVH----DGLPKGYVSSGN 87 (454)
T ss_dssp CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECC----CCCCTTCCCCSC
T ss_pred CCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecC----CCCCCCccccCC
Confidence 478999999999999999999999999999 9999999986555543321 112469999998 778776554444
Q ss_pred CchHHHHHHHHHHHhhHHHHHHHHhh--cCCcEEEEcCCCcccccccccccCCeeEEEecchHHHHHHHhccccccCC--
Q 037721 86 MTPHMAELLKQALDLMQPQIKTLLSQ--LKPHFVFFDFTHYWLPGLVGSQLGIKTVNFSVFSAISQAYLVVPARKLNN-- 161 (465)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~vi~D~~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~-- 161 (465)
....+..++........+.+.+++++ .++||||+|.+++|+..+ |+++|||++.|++++++.+..+.+.+.....
T Consensus 88 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~v-A~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~ 166 (454)
T 3hbf_A 88 PREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADL-AEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTG 166 (454)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHH-HHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHH-HHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcC
Confidence 33233333444444455566666554 378999999999999999 9999999999999999888876654322110
Q ss_pred -cccccCCCCCCCCCCccCCCChhhhhhhhhhhh--cCCCCchhhhhcccccCCccEEEEcCccccccchHHHHHhhCCC
Q 037721 162 -SLADLMKSPDGFPATSITSLDEFVARDYLYVYT--KFNGGPSVYERGIQGVDGCDVLAIKTCNEMEGPYLDFVRTQFKK 238 (465)
Q Consensus 162 -~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~~ 238 (465)
.......+..++|+ ++.....+++.... ......+.+.+..+....++++++||+++||+++++++++.+ +
T Consensus 167 ~~~~~~~~~~~~iPg-----~p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~-~ 240 (454)
T 3hbf_A 167 SKEVHDVKSIDVLPG-----FPELKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKF-K 240 (454)
T ss_dssp HHHHTTSSCBCCSTT-----SCCBCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTS-S
T ss_pred CCccccccccccCCC-----CCCcChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcC-C
Confidence 00111222334555 22222233332221 111112444555666778999999999999999999888766 5
Q ss_pred CeEeeccCCCCCCCC--CcchhhhccccCCCCCCeEEEEEeCCcccCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCcc
Q 037721 239 PVLLTGPLVNPEPPS--GELEERWAKWLCKYPPKSVIYCSFGSETFLTVDQIKELAIGLEITGLPFFLVLNFPPNVDGQS 316 (465)
Q Consensus 239 ~~~~vGp~~~~~~~~--~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~ 316 (465)
++++|||+ .+.... ...+.++.+||+.++++++|||||||....+.+++.+++.+|+..+++|||+++..
T Consensus 241 ~v~~vGPl-~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~------- 312 (454)
T 3hbf_A 241 LLLNVGPF-NLTTPQRKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGD------- 312 (454)
T ss_dssp CEEECCCH-HHHSCCSCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSC-------
T ss_pred CEEEECCc-ccccccccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCc-------
Confidence 89999999 543221 22356789999998889999999999998889999999999999999999999875
Q ss_pred cccccCChhhhhhcCCCceEEecccchHhhhccccceeecccCChhhHHHHHHhCCceeeccccccchhhHHHHhhhhcc
Q 037721 317 ELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRHESVGCYVCHSGFSSVTEAVISDCQLVLLPLKGDQFLNSKLVAGDLKA 396 (465)
Q Consensus 317 ~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~~~~~~~ItHgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~ 396 (465)
....+|++|.++.+ .|+.+.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.||+
T Consensus 313 -~~~~lp~~~~~~~~-~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~ 390 (454)
T 3hbf_A 313 -PKEKLPKGFLERTK-TKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEI 390 (454)
T ss_dssp -HHHHSCTTHHHHTT-TTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCS
T ss_pred -chhcCCHhHHhhcC-CceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCe
Confidence 34578888877654 5677779999999999999999999999999999999999999999999999999999995699
Q ss_pred eEEeeecCCCCccCHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHHHc----CCchHHHHHHHHHHHH
Q 037721 397 GVEVNRRDHDGHFGKEDIFKAVKTVMVDVNKEPGASIRANQKWWREFLLN----GQIQDKFIADFVKDLK 462 (465)
Q Consensus 397 G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~a~~l~~~~~~----~~~~~~~~~~~~~~l~ 462 (465)
|+.++.. .+++++|.++|+++|+ +++.++||+||+++++.+++ +|++.+++++|++++.
T Consensus 391 Gv~l~~~----~~~~~~l~~av~~ll~---~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 391 GVGVDNG----VLTKESIKKALELTMS---SEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp EEECGGG----SCCHHHHHHHHHHHHS---SHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred eEEecCC----CCCHHHHHHHHHHHHC---CChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 9999875 4999999999999998 23334899999999999975 4677889999999875
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=1.6e-58 Score=469.42 Aligned_cols=435 Identities=23% Similarity=0.333 Sum_probs=311.3
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhC-CCEEEEEeCCC--Chhhhhccc-CCCCCeeEEEccCCCCCCCCCCCCCCC
Q 037721 9 DQLHVVMFPWFAFGHISPFVQLSNKLSLH-GVKVSFFSAPG--NIPRIKSSL-NLTPMADIIPLQIPHVDGLPPGLDSTS 84 (465)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~r-Gh~V~~~~~~~--~~~~i~~~g-~~~~~~~~~~l~~~~~~~~~~~~~~~~ 84 (465)
+++||+++|+|++||++|++.||++|++| ||+|||+++.. +...+++.. ....+++|+.++... .+.. .
T Consensus 5 ~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~---~~~~-~--- 77 (480)
T 2vch_A 5 KTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPVD---LTDL-S--- 77 (480)
T ss_dssp -CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCCC---CTTS-C---
T ss_pred CCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhccccCCCceEEEcCCCC---CCCC-C---
Confidence 35799999999999999999999999998 99999999987 344444311 001349999997321 1111 1
Q ss_pred CCchHHHHHHHHHHHhhHHHHHHHHhh----cCC-cEEEEcCCCcccccccccccCCeeEEEecchHHHHHHHhcccccc
Q 037721 85 EMTPHMAELLKQALDLMQPQIKTLLSQ----LKP-HFVFFDFTHYWLPGLVGSQLGIKTVNFSVFSAISQAYLVVPARKL 159 (465)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~p-D~vi~D~~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~ 159 (465)
... .....+........+.+.+++++ .++ |+||+|.++.|+..+ |+++|||++.++++++.....+.+.+...
T Consensus 78 ~~~-~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~v-A~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 155 (480)
T 2vch_A 78 SST-RIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDV-AVEFHVPPYIFYPTTANVLSFFLHLPKLD 155 (480)
T ss_dssp TTC-CHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHH-HHHTTCCEEEEECSCHHHHHHHHHHHHHH
T ss_pred Cch-hHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHH-HHHcCCCEEEEECccHHHHHHHHHHHHHH
Confidence 111 12222333344455677777766 378 999999999999888 99999999999999887665544322111
Q ss_pred ---CCcccccCCCCCCCCCCccCCCChhhhhhhhhhhhcCCCCchhhhhcccccCCccEEEEcCccccccchHHHHHhhC
Q 037721 160 ---NNSLADLMKSPDGFPATSITSLDEFVARDYLYVYTKFNGGPSVYERGIQGVDGCDVLAIKTCNEMEGPYLDFVRTQF 236 (465)
Q Consensus 160 ---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~ 236 (465)
.....+... +..+|+. .+ +....+.... ..+....+..+.+....++..+++++|++.++|+.++..+.+..
T Consensus 156 ~~~~~~~~~~~~-~~~~Pg~-~p-~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~ 230 (480)
T 2vch_A 156 ETVSCEFRELTE-PLMLPGC-VP-VAGKDFLDPA--QDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPG 230 (480)
T ss_dssp HHCCSCGGGCSS-CBCCTTC-CC-BCGGGSCGGG--SCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCC
T ss_pred hcCCCcccccCC-cccCCCC-CC-CChHHCchhh--hcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcc
Confidence 000001000 1122320 00 2222222111 01100111222333334556788999999999998877776421
Q ss_pred --CCCeEeeccCCCCCCCC---CcchhhhccccCCCCCCeEEEEEeCCcccCCHHHHHHHHHHHHhcCCCeEEEEcCCCC
Q 037721 237 --KKPVLLTGPLVNPEPPS---GELEERWAKWLCKYPPKSVIYCSFGSETFLTVDQIKELAIGLEITGLPFFLVLNFPPN 311 (465)
Q Consensus 237 --~~~~~~vGp~~~~~~~~---~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~ 311 (465)
.+++++|||+ ...+.. ...+.++.+|++.++++++|||||||....+.+++.+++.+++..+++|||+++....
T Consensus 231 ~~~~~v~~vGpl-~~~~~~~~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~ 309 (480)
T 2vch_A 231 LDKPPVYPVGPL-VNIGKQEAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSG 309 (480)
T ss_dssp TTCCCEEECCCC-CCCSCSCC-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCS
T ss_pred cCCCcEEEEecc-ccccccccCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCccc
Confidence 2589999999 654322 2356788999999888899999999999888999999999999999999999987531
Q ss_pred CC--C------cccccccCChhhhhhcCCCceEEecccchHhhhccccceeecccCChhhHHHHHHhCCceeeccccccc
Q 037721 312 VD--G------QSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRHESVGCYVCHSGFSSVTEAVISDCQLVLLPLKGDQ 383 (465)
Q Consensus 312 ~~--~------~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~~~~~~~ItHgG~~s~~Eal~~GvP~l~~P~~~DQ 383 (465)
.. . ..+....+|++|.++.++.++++.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||
T Consensus 310 ~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ 389 (480)
T 2vch_A 310 IANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQ 389 (480)
T ss_dssp STTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTH
T ss_pred cccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccc
Confidence 00 0 001224689999988888888887899999999999999999999999999999999999999999999
Q ss_pred hhhHHHH-hhhhcceEEeeecCCCCccCHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHHHc---CCc-hHHHHHHHH
Q 037721 384 FLNSKLV-AGDLKAGVEVNRRDHDGHFGKEDIFKAVKTVMVDVNKEPGASIRANQKWWREFLLN---GQI-QDKFIADFV 458 (465)
Q Consensus 384 ~~na~~v-~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~a~~l~~~~~~---~~~-~~~~~~~~~ 458 (465)
+.||+++ ++. |+|+.++..+ ++.+++++|.++|+++|. ++++++||+||+++++++++ .|| +.+++++|+
T Consensus 390 ~~na~~l~~~~-G~g~~l~~~~-~~~~~~~~l~~av~~vl~---~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v 464 (480)
T 2vch_A 390 KMNAVLLSEDI-RAALRPRAGD-DGLVRREEVARVVKGLME---GEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVA 464 (480)
T ss_dssp HHHHHHHHHTT-CCEECCCCCT-TSCCCHHHHHHHHHHHHT---STHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHH
T ss_pred hHHHHHHHHHh-CeEEEeeccc-CCccCHHHHHHHHHHHhc---CcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 9999997 576 9999997641 235999999999999998 66778999999999999987 545 577899999
Q ss_pred HHHHh
Q 037721 459 KDLKA 463 (465)
Q Consensus 459 ~~l~~ 463 (465)
+.+++
T Consensus 465 ~~~~~ 469 (480)
T 2vch_A 465 LKWKA 469 (480)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98864
No 3
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=6.2e-59 Score=473.80 Aligned_cols=426 Identities=19% Similarity=0.304 Sum_probs=305.1
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhcccC---C--CCCeeEEEccCCCCCCCCCCCCC
Q 037721 8 ADQLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSSLN---L--TPMADIIPLQIPHVDGLPPGLDS 82 (465)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~~g~---~--~~~~~~~~l~~~~~~~~~~~~~~ 82 (465)
+++.||+++|+|++||++|++.||++|++|||+|||++++.+...+.+... . .++++|+.++ ++++.. +.
T Consensus 6 ~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~----~~lp~~-~~ 80 (482)
T 2pq6_A 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIP----DGLTPM-EG 80 (482)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEEC----CCCC-----
T ss_pred CCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECC----CCCCCc-cc
Confidence 456799999999999999999999999999999999999987665544210 0 0259999997 455441 10
Q ss_pred CCCCchHHHHHHHHHHHhhHHHHHHHHhh-------cCCcEEEEcCCCcccccccccccCCeeEEEecchHHHHHHHhcc
Q 037721 83 TSEMTPHMAELLKQALDLMQPQIKTLLSQ-------LKPHFVFFDFTHYWLPGLVGSQLGIKTVNFSVFSAISQAYLVVP 155 (465)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------~~pD~vi~D~~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~ 155 (465)
..+.......++........+.+.+++++ .++||||+|.++.|+..+ |+++|||++.++++++.....+.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~v-A~~lgiP~v~~~~~~~~~~~~~~~~ 159 (482)
T 2pq6_A 81 DGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQA-AEEFELPNVLYFSSSACSLLNVMHF 159 (482)
T ss_dssp -----CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHH-HHHTTCCEEEEECSCHHHHHHHTTH
T ss_pred ccCcchhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHH-HHHcCCCEEEEecccHHHHHHHHHH
Confidence 00111112222222223344555666653 479999999999999999 9999999999999988766554332
Q ss_pred ccc-----cCCcccc------cCCCCCCCCCCccCCCChhhhhhhhhhhhcCC--C-CchhhhhcccccCCccEEEEcCc
Q 037721 156 ARK-----LNNSLAD------LMKSPDGFPATSITSLDEFVARDYLYVYTKFN--G-GPSVYERGIQGVDGCDVLAIKTC 221 (465)
Q Consensus 156 ~~~-----~~~~~~~------~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~s~ 221 (465)
+.. .+..... .......+|+.. . ++. .++..+..... . ....+....+....++.+++||+
T Consensus 160 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~-~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~ 234 (482)
T 2pq6_A 160 RSFVERGIIPFKDESYLTNGCLETKVDWIPGLK-N-FRL---KDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTF 234 (482)
T ss_dssp HHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCC-S-CBG---GGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSC
T ss_pred HHHHhcCCCCCccccccccccccCccccCCCCC-C-Cch---HHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcCh
Confidence 211 0100000 011112233200 0 222 12211111110 0 11222334445678899999999
Q ss_pred cccccchHHHHHhhCCCCeEeeccCCCCC-CCC----------Cc---chhhhccccCCCCCCeEEEEEeCCcccCCHHH
Q 037721 222 NEMEGPYLDFVRTQFKKPVLLTGPLVNPE-PPS----------GE---LEERWAKWLCKYPPKSVIYCSFGSETFLTVDQ 287 (465)
Q Consensus 222 ~~l~~~~~~~~~~~~~~~~~~vGp~~~~~-~~~----------~~---~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~ 287 (465)
++||+++++.+++.+ +++++|||+ +.. +.. .. .+.++.+|++.++++++|||||||....+.++
T Consensus 235 ~~le~~~~~~~~~~~-~~v~~VGPl-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~ 312 (482)
T 2pq6_A 235 NELESDVINALSSTI-PSIYPIGPL-PSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQ 312 (482)
T ss_dssp GGGGHHHHHHHHTTC-TTEEECCCH-HHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHH
T ss_pred HHHhHHHHHHHHHhC-CcEEEEcCC-cccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHH
Confidence 999999988888777 689999999 542 111 11 23357889999888899999999998888888
Q ss_pred HHHHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhhhhhcCCCceEEecccchHhhhccccceeecccCChhhHHHH
Q 037721 288 IKELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRHESVGCYVCHSGFSSVTEA 367 (465)
Q Consensus 288 ~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~~~~~~~ItHgG~~s~~Ea 367 (465)
+..++.+|+..+++|+|+++...... ....+|++|.++. ..|+.+.+|+||.++|+|+++++|||||||||++||
T Consensus 313 ~~~~~~~l~~~~~~~l~~~~~~~~~~----~~~~l~~~~~~~~-~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Ea 387 (482)
T 2pq6_A 313 LLEFAWGLANCKKSFLWIIRPDLVIG----GSVIFSSEFTNEI-ADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTES 387 (482)
T ss_dssp HHHHHHHHHHTTCEEEEECCGGGSTT----TGGGSCHHHHHHH-TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHH
T ss_pred HHHHHHHHHhcCCcEEEEEcCCcccc----ccccCcHhHHHhc-CCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHH
Confidence 99999999999999999998642110 1223788887654 358888899999999999999999999999999999
Q ss_pred HHhCCceeeccccccchhhHHHHh-hhhcceEEeeecCCCCccCHHHHHHHHHHhhcccCCcchH---HHHHHHHHHHHH
Q 037721 368 VISDCQLVLLPLKGDQFLNSKLVA-GDLKAGVEVNRRDHDGHFGKEDIFKAVKTVMVDVNKEPGA---SIRANQKWWREF 443 (465)
Q Consensus 368 l~~GvP~l~~P~~~DQ~~na~~v~-~~~G~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~---~~~~~a~~l~~~ 443 (465)
+++|||||++|+++||+.||++++ +. |+|+.++ . .+++++|.++|+++|. ++ +||+||+++++.
T Consensus 388 l~~GvP~i~~P~~~dQ~~na~~~~~~~-G~g~~l~-~----~~~~~~l~~~i~~ll~------~~~~~~~r~~a~~l~~~ 455 (482)
T 2pq6_A 388 ICAGVPMLCWPFFADQPTDCRFICNEW-EIGMEID-T----NVKREELAKLINEVIA------GDKGKKMKQKAMELKKK 455 (482)
T ss_dssp HHHTCCEEECCCSTTHHHHHHHHHHTS-CCEEECC-S----SCCHHHHHHHHHHHHT------SHHHHHHHHHHHHHHHH
T ss_pred HHcCCCEEecCcccchHHHHHHHHHHh-CEEEEEC-C----CCCHHHHHHHHHHHHc------CCcHHHHHHHHHHHHHH
Confidence 999999999999999999999997 56 9999998 4 3999999999999998 55 799999999999
Q ss_pred HHc----CCchHHHHHHHHHHHHh
Q 037721 444 LLN----GQIQDKFIADFVKDLKA 463 (465)
Q Consensus 444 ~~~----~~~~~~~~~~~~~~l~~ 463 (465)
+++ +|++.+++++|++.++.
T Consensus 456 ~~~a~~~gGss~~~l~~~v~~~~~ 479 (482)
T 2pq6_A 456 AEENTRPGGCSYMNLNKVIKDVLL 479 (482)
T ss_dssp HHHHTSTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHhcCCcHHHHHHHHHHHHHh
Confidence 986 36688999999998764
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=2.3e-57 Score=457.94 Aligned_cols=429 Identities=21% Similarity=0.290 Sum_probs=302.9
Q ss_pred CCCCCcEEEEecCCCccCHHHHHHHHHHHHhCCC--EEEEEeCCCChhhhhccc--CCCCCeeEEEccCCCCCCCCCCCC
Q 037721 6 AEADQLHVVMFPWFAFGHISPFVQLSNKLSLHGV--KVSFFSAPGNIPRIKSSL--NLTPMADIIPLQIPHVDGLPPGLD 81 (465)
Q Consensus 6 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh--~V~~~~~~~~~~~i~~~g--~~~~~~~~~~l~~~~~~~~~~~~~ 81 (465)
..+++.||+++|+|++||++|+++||++|++||| .|||++++.....+.+.. ....+++|+.++ ++++.+.+
T Consensus 3 ~~~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~----~glp~~~~ 78 (456)
T 2c1x_A 3 QTTTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDIS----DGVPEGYV 78 (456)
T ss_dssp ----CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECC----CCCCTTCC
T ss_pred CCCCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCC----CCCCCccc
Confidence 3455689999999999999999999999999865 568888865444332211 001359999987 56655432
Q ss_pred CCCCCchHHHHHHHHHH-HhhHHHHHHHHhh--cCCcEEEEcCCCcccccccccccCCeeEEEecchHHHHHHHhccccc
Q 037721 82 STSEMTPHMAELLKQAL-DLMQPQIKTLLSQ--LKPHFVFFDFTHYWLPGLVGSQLGIKTVNFSVFSAISQAYLVVPARK 158 (465)
Q Consensus 82 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~--~~pD~vi~D~~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~ 158 (465)
... ........+.... ....+.+.+++++ .+||+||+|.++.|+..+ |+++|||+|.++++++..+..+.+.+..
T Consensus 79 ~~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~v-A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 156 (456)
T 2c1x_A 79 FAG-RPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADM-AAEMGVAWLPFWTAGPNSLSTHVYIDEI 156 (456)
T ss_dssp CCC-CTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHH-HHHHTCEEEEEECSCHHHHHHHHTHHHH
T ss_pred ccC-ChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHH-HHHhCCCEEEEeCccHHHHHHHhhhHHH
Confidence 211 2222222222222 2233444444443 489999999999999899 9999999999999987765543322110
Q ss_pred c---CCcc--cccCCCCCCCCCCccCCCChhhhhhhhhhhh--cCCCCc-hhhhhcccccCCccEEEEcCccccccchHH
Q 037721 159 L---NNSL--ADLMKSPDGFPATSITSLDEFVARDYLYVYT--KFNGGP-SVYERGIQGVDGCDVLAIKTCNEMEGPYLD 230 (465)
Q Consensus 159 ~---~~~~--~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~ 230 (465)
. .... ........++|+ +......++..... .....+ ..+.+..+....++.+++||+++||+++++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~pg-----~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~ 231 (456)
T 2c1x_A 157 REKIGVSGIQGREDELLNFIPG-----MSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTN 231 (456)
T ss_dssp HHHHCSSCCTTCTTCBCTTSTT-----CTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHH
T ss_pred HhccCCcccccccccccccCCC-----CCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHH
Confidence 0 0000 011111123343 11111122211100 000011 222333344567899999999999999888
Q ss_pred HHHhhCCCCeEeeccCCCCCCCCC--cchhhhccccCCCCCCeEEEEEeCCcccCCHHHHHHHHHHHHhcCCCeEEEEcC
Q 037721 231 FVRTQFKKPVLLTGPLVNPEPPSG--ELEERWAKWLCKYPPKSVIYCSFGSETFLTVDQIKELAIGLEITGLPFFLVLNF 308 (465)
Q Consensus 231 ~~~~~~~~~~~~vGp~~~~~~~~~--~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~i~~al~~~~~~~i~~~~~ 308 (465)
.+++.+ +++++|||+ ....... ..+.++.+|++.++++++|||||||......+++..++.+++..+++|+|+++.
T Consensus 232 ~~~~~~-~~~~~vGpl-~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~ 309 (456)
T 2c1x_A 232 DLKSKL-KTYLNIGPF-NLITPPPVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRD 309 (456)
T ss_dssp HHHHHS-SCEEECCCH-HHHC---------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCG
T ss_pred HHHhcC-CCEEEecCc-ccCcccccccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECC
Confidence 888766 589999999 5432211 122457889998888899999999999888899999999999999999999986
Q ss_pred CCCCCCcccccccCChhhhhhcCCCceEEecccchHhhhccccceeecccCChhhHHHHHHhCCceeeccccccchhhHH
Q 037721 309 PPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRHESVGCYVCHSGFSSVTEAVISDCQLVLLPLKGDQFLNSK 388 (465)
Q Consensus 309 ~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~~~~~~~ItHgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~ 388 (465)
. ....+|++|.++. ..|+.+.+|+||.++|+|+++++|||||||||++||+++|||||++|++.||+.||+
T Consensus 310 ~--------~~~~l~~~~~~~~-~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~ 380 (456)
T 2c1x_A 310 K--------ARVHLPEGFLEKT-RGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGR 380 (456)
T ss_dssp G--------GGGGSCTTHHHHH-TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHH
T ss_pred c--------chhhCCHHHHhhc-CCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHH
Confidence 4 2346788876654 357888899999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhcceEEeeecCCCCccCHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHHHc----CCchHHHHHHHHHHHHh
Q 037721 389 LVAGDLKAGVEVNRRDHDGHFGKEDIFKAVKTVMVDVNKEPGASIRANQKWWREFLLN----GQIQDKFIADFVKDLKA 463 (465)
Q Consensus 389 ~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~a~~l~~~~~~----~~~~~~~~~~~~~~l~~ 463 (465)
++++.||+|+.++.. .+++++|.++|+++|+ +++.++||+||+++++.+++ +|++.+++++|++.+++
T Consensus 381 ~l~~~~g~g~~l~~~----~~~~~~l~~~i~~ll~---~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~~ 452 (456)
T 2c1x_A 381 MVEDVLEIGVRIEGG----VFTKSGLMSCFDQILS---QEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSK 452 (456)
T ss_dssp HHHHTSCCEEECGGG----SCCHHHHHHHHHHHHH---SHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTS
T ss_pred HHHHHhCeEEEecCC----CcCHHHHHHHHHHHHC---CCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHh
Confidence 999988999999865 4899999999999998 11123899999999999975 36678899999998754
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=1.1e-57 Score=461.50 Aligned_cols=425 Identities=21% Similarity=0.330 Sum_probs=307.8
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCCCh-----hhhhcccCCCCCeeEEEccCCCCCCCCCCC
Q 037721 8 ADQLHVVMFPWFAFGHISPFVQLSNKLSLH--GVKVSFFSAPGNI-----PRIKSSLNLTPMADIIPLQIPHVDGLPPGL 80 (465)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~V~~~~~~~~~-----~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~ 80 (465)
.++.||+++|+|++||++|++.||+.|++| ||+|||++++.+. +.+.+......+++|..+|.. .++..
T Consensus 7 ~~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~---~~~~~- 82 (463)
T 2acv_A 7 NKNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEV---EPPPQ- 82 (463)
T ss_dssp HHCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCC---CCCCG-
T ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCC---CCCcc-
Confidence 456899999999999999999999999999 9999999988753 223220011235999999821 12211
Q ss_pred CCCCCCchHHHHHHHHHHHhhHHHHHHHHhh---cCCcEEEEcCCCcccccccccccCCeeEEEecchHHHHHHHhcccc
Q 037721 81 DSTSEMTPHMAELLKQALDLMQPQIKTLLSQ---LKPHFVFFDFTHYWLPGLVGSQLGIKTVNFSVFSAISQAYLVVPAR 157 (465)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~vi~D~~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~ 157 (465)
+...+ .... +........+.+.+++++ .+||+||+|.++.|+..+ |+++|||+++++++++..+..+.+.+.
T Consensus 83 ~~~~~--~~~~--~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~v-A~~lgiP~v~~~~~~~~~~~~~~~~~~ 157 (463)
T 2acv_A 83 ELLKS--PEFY--ILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDV-GNEFGIPSYLFLTSNVGFLSLMLSLKN 157 (463)
T ss_dssp GGGGS--HHHH--HHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHH-HHHTTCCEEEEESSCHHHHHHHHHGGG
T ss_pred cccCC--ccHH--HHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchhHHHH-HHHcCCCEEEEeCchHHHHHHHHHHHh
Confidence 10011 1111 333444556678888877 689999999999999999 999999999999998887665544322
Q ss_pred ccC-CcccccCC--CCCCCCCCccCCCChhhhhhhhhhhhcCCCCchhhhhcccccCCccEEEEcCccccccchHHHHHh
Q 037721 158 KLN-NSLADLMK--SPDGFPATSITSLDEFVARDYLYVYTKFNGGPSVYERGIQGVDGCDVLAIKTCNEMEGPYLDFVRT 234 (465)
Q Consensus 158 ~~~-~~~~~~~~--~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~ 234 (465)
... ....+... ....+|+...+ +...++.... ..+ ...+..+.+.....+.++.+++||+++||+++.+.+.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~pg~~~~-~~~~~l~~~~--~~~-~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~ 233 (463)
T 2acv_A 158 RQIEEVFDDSDRDHQLLNIPGISNQ-VPSNVLPDAC--FNK-DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYD 233 (463)
T ss_dssp SCTTCCCCCSSGGGCEECCTTCSSC-EEGGGSCHHH--HCT-TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHH
T ss_pred hcccCCCCCccccCceeECCCCCCC-CChHHCchhh--cCC-chHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHh
Confidence 110 00000000 01123330001 2222222111 111 11222333333445678889999999999988887776
Q ss_pred hC--CCCeEeeccCCCCCCC-C--C---cchhhhccccCCCCCCeEEEEEeCCcc-cCCHHHHHHHHHHHHhcCCCeEEE
Q 037721 235 QF--KKPVLLTGPLVNPEPP-S--G---ELEERWAKWLCKYPPKSVIYCSFGSET-FLTVDQIKELAIGLEITGLPFFLV 305 (465)
Q Consensus 235 ~~--~~~~~~vGp~~~~~~~-~--~---~~~~~~~~~l~~~~~~~~v~vs~GS~~-~~~~~~~~~i~~al~~~~~~~i~~ 305 (465)
.. ++++++|||+ ..... . . ..+.++.+|++.++++++|||||||.. ..+.+++.+++.+|+..+++|||+
T Consensus 234 ~~~p~~~v~~vGpl-~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~ 312 (463)
T 2acv_A 234 HDEKIPPIYAVGPL-LDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWS 312 (463)
T ss_dssp HCTTSCCEEECCCC-CCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEE
T ss_pred ccccCCcEEEeCCC-cccccccccccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEE
Confidence 55 5689999999 65432 1 1 345688999999888899999999999 788899999999999999999999
Q ss_pred EcCCCCCCCcccccccCChhhhhhcC-CCceEEecccchHhhhccccceeecccCChhhHHHHHHhCCceeeccccccch
Q 037721 306 LNFPPNVDGQSELVRTLPPGFMDRVK-DRGVVHTGWVQQQLILRHESVGCYVCHSGFSSVTEAVISDCQLVLLPLKGDQF 384 (465)
Q Consensus 306 ~~~~~~~~~~~~~~~~lp~~~~~~~~-~~nv~~~~~~pq~~vL~~~~~~~~ItHgG~~s~~Eal~~GvP~l~~P~~~DQ~ 384 (465)
++.. ...+|++|.++.. ..|+.+.+|+||.++|+|+++++|||||||||++||+++|||||++|+++||+
T Consensus 313 ~~~~---------~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~ 383 (463)
T 2acv_A 313 NSAE---------KKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQ 383 (463)
T ss_dssp CCCC---------GGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHH
T ss_pred ECCC---------cccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhH
Confidence 9763 1246777765531 24677889999999999999999999999999999999999999999999999
Q ss_pred hhHHHH-hhhhcceEEee-ecCCCC--ccCHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHHHc----CCchHHHHHH
Q 037721 385 LNSKLV-AGDLKAGVEVN-RRDHDG--HFGKEDIFKAVKTVMVDVNKEPGASIRANQKWWREFLLN----GQIQDKFIAD 456 (465)
Q Consensus 385 ~na~~v-~~~~G~G~~l~-~~~~~~--~~~~~~l~~ai~~ll~~~~~~~~~~~~~~a~~l~~~~~~----~~~~~~~~~~ 456 (465)
.||+++ ++. |+|+.+. ..+ .+ .+++++|.++|+++|++ +++||+||+++++.+++ +|++.+++++
T Consensus 384 ~Na~~lv~~~-g~g~~l~~~~~-~~~~~~~~~~l~~ai~~ll~~-----~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~ 456 (463)
T 2acv_A 384 LNAFRLVKEW-GVGLGLRVDYR-KGSDVVAAEEIEKGLKDLMDK-----DSIVHKKVQEMKEMSRNAVVDGGSSLISVGK 456 (463)
T ss_dssp HHHHHHHHTS-CCEEESCSSCC-TTCCCCCHHHHHHHHHHHTCT-----TCTHHHHHHHHHHHHHHHTSTTSHHHHHHHH
T ss_pred HHHHHHHHHc-CeEEEEecccC-CCCccccHHHHHHHHHHHHhc-----cHHHHHHHHHHHHHHHHHHhcCCcHHHHHHH
Confidence 999995 776 9999993 110 12 48999999999999972 47899999999999986 4667889999
Q ss_pred HHHHHH
Q 037721 457 FVKDLK 462 (465)
Q Consensus 457 ~~~~l~ 462 (465)
|++.++
T Consensus 457 ~v~~~~ 462 (463)
T 2acv_A 457 LIDDIT 462 (463)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 999875
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=2.7e-46 Score=375.70 Aligned_cols=402 Identities=15% Similarity=0.151 Sum_probs=281.2
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhcccCCCCCeeEEEccCCCCCCCCCCCCC---CC
Q 037721 8 ADQLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSSLNLTPMADIIPLQIPHVDGLPPGLDS---TS 84 (465)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~~~---~~ 84 (465)
++.+||+|++++++||++|++.||++|+++||+|+|++++.+.+.+++.| ++|++++ ..++..... ..
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~g-----~~~~~~~----~~~~~~~~~~~~~~ 80 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAAG-----ATPVVYD----SILPKESNPEESWP 80 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHT-----CEEEECC----CCSCCTTCTTCCCC
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhCC-----CEEEecC----ccccccccchhhcc
Confidence 45689999999999999999999999999999999999999888888888 8999887 233222111 01
Q ss_pred CCchHHHHHHHHHHHhhHHHHHHHHhhcCCcEEEEcCCCcccccccccccCCeeEEEecchHHHHHHHhccccccC-Ccc
Q 037721 85 EMTPHMAELLKQALDLMQPQIKTLLSQLKPHFVFFDFTHYWLPGLVGSQLGIKTVNFSVFSAISQAYLVVPARKLN-NSL 163 (465)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~vi~D~~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~-~~~ 163 (465)
.........+........+.+.+++++.+||+||+|.+.+|+..+ |+.+|||++.+++.+.........+..... ...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~VI~d~~~~~~~~~-A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (424)
T 2iya_A 81 EDQESAMGLFLDEAVRVLPQLEDAYADDRPDLIVYDIASWPAPVL-GRKWDIPFVQLSPTFVAYEGFEEDVPAVQDPTAD 159 (424)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHTTTSCCSEEEEETTCTHHHHH-HHHHTCCEEEEESSCCCCTTHHHHSGGGSCCCC-
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEcCcccHHHHH-HHhcCCCEEEEecccccccccccccccccccccc
Confidence 111122233333344456778888888999999999988888889 999999999998765421111000000000 000
Q ss_pred cc-cCCCCCCCCCCccCCCCh--hhh----hhhhhhhhcCCCCchhhhhcccccCCccEEEEcCccccccchHHHHHhhC
Q 037721 164 AD-LMKSPDGFPATSITSLDE--FVA----RDYLYVYTKFNGGPSVYERGIQGVDGCDVLAIKTCNEMEGPYLDFVRTQF 236 (465)
Q Consensus 164 ~~-~~~~~~~~p~~~~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~ 236 (465)
.. ...++..... ... +.. ... ..+....... ++.. ........++.++++++++++++. ..+
T Consensus 160 ~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~--g~~~--~~~~~~~~~~~~l~~~~~~l~~~~-----~~~ 228 (424)
T 2iya_A 160 RGEEAAAPAGTGD-AEE-GAEAEDGLVRFFTRLSAFLEEH--GVDT--PATEFLIAPNRCIVALPRTFQIKG-----DTV 228 (424)
T ss_dssp ----------------------HHHHHHHHHHHHHHHHHT--TCCS--CHHHHHHCCSSEEESSCTTTSTTG-----GGC
T ss_pred ccccccccccccc-chh-hhccchhHHHHHHHHHHHHHHc--CCCC--CHHHhccCCCcEEEEcchhhCCCc-----cCC
Confidence 00 0000000000 000 000 000 1111111111 1110 001111246788999999998742 346
Q ss_pred CCCeEeeccCCCCCCCCCcchhhhccccCCCCCCeEEEEEeCCcccCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCcc
Q 037721 237 KKPVLLTGPLVNPEPPSGELEERWAKWLCKYPPKSVIYCSFGSETFLTVDQIKELAIGLEITGLPFFLVLNFPPNVDGQS 316 (465)
Q Consensus 237 ~~~~~~vGp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~ 316 (465)
++++++|||+ .... .+..+|++..+++++|||++||......+.+..++++++..+++++|.++.+.+.+
T Consensus 229 ~~~~~~vGp~-~~~~------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~--- 298 (424)
T 2iya_A 229 GDNYTFVGPT-YGDR------SHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSVGRFVDPA--- 298 (424)
T ss_dssp CTTEEECCCC-CCCC------GGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEECCTTSCGG---
T ss_pred CCCEEEeCCC-CCCc------ccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEECCcCChH---
Confidence 7789999998 4322 12346877666678999999999866678889999999888899999987643211
Q ss_pred cccccCChhhhhhcCCCceEEecccchHhhhccccceeecccCChhhHHHHHHhCCceeeccccccchhhHHHHhhhhcc
Q 037721 317 ELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRHESVGCYVCHSGFSSVTEAVISDCQLVLLPLKGDQFLNSKLVAGDLKA 396 (465)
Q Consensus 317 ~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~~~~~~~ItHgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~ 396 (465)
....+| .|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|++|...||+.||+++++. |+
T Consensus 299 -~~~~~~---------~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~ 365 (424)
T 2iya_A 299 -DLGEVP---------PNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVEL-GL 365 (424)
T ss_dssp -GGCSCC---------TTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHT-TS
T ss_pred -HhccCC---------CCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHHHC-CC
Confidence 111233 38999999999999999998 999999999999999999999999999999999999998 99
Q ss_pred eEEeeecCCCCccCHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHh
Q 037721 397 GVEVNRRDHDGHFGKEDIFKAVKTVMVDVNKEPGASIRANQKWWREFLLNGQIQDKFIADFVKDLKA 463 (465)
Q Consensus 397 G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~l~~ 463 (465)
|+.++.. .+++++|.++|+++|+ |++++++++++++.+++.++.+++++.+.+.+++
T Consensus 366 g~~~~~~----~~~~~~l~~~i~~ll~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 422 (424)
T 2iya_A 366 GRHIPRD----QVTAEKLREAVLAVAS------DPGVAERLAAVRQEIREAGGARAAADILEGILAE 422 (424)
T ss_dssp EEECCGG----GCCHHHHHHHHHHHHH------CHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred EEEcCcC----CCCHHHHHHHHHHHHc------CHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhc
Confidence 9999865 3899999999999999 8999999999999999888888888777766543
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=2e-45 Score=366.43 Aligned_cols=371 Identities=16% Similarity=0.165 Sum_probs=239.8
Q ss_pred CCCCCCCCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhcccCCCCCeeEEEccCCC-CCC--CC
Q 037721 1 MGTESAEADQLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSSLNLTPMADIIPLQIPH-VDG--LP 77 (465)
Q Consensus 1 ~~~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~~g~~~~~~~~~~l~~~~-~~~--~~ 77 (465)
|+|++-..+.+||+|+++|++||++|+++||++|++|||+|||++++.+.+..+ .| +.+..+.... ... .+
T Consensus 13 ~g~~~~~~~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~-~g-----~~~~~~~~~~~~~~~~~~ 86 (400)
T 4amg_A 13 LGTENLYFQSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAE-AG-----LCAVDVSPGVNYAKLFVP 86 (400)
T ss_dssp --------CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHT-TT-----CEEEESSTTCCSHHHHSC
T ss_pred CCcccCCCCCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHh-cC-----CeeEecCCchhHhhhccc
Confidence 556555567899999999999999999999999999999999999998876544 45 7777764110 000 00
Q ss_pred CCCCC------CCCCchHHHHHHHHHHHhhHHHHHHHHhhcCCcEEEEcCCCcccccccccccCCeeEEEecchHHHHHH
Q 037721 78 PGLDS------TSEMTPHMAELLKQALDLMQPQIKTLLSQLKPHFVFFDFTHYWLPGLVGSQLGIKTVNFSVFSAISQAY 151 (465)
Q Consensus 78 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~vi~D~~~~~~~~~~A~~~giP~v~~~~~~~~~~~~ 151 (465)
..... ...........+..........+.+++++++||+||+|.+.+++..+ |+.+|||++.+...+......
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~Vv~d~~~~~~~~~-A~~~gip~~~~~~~~~~~~~~ 165 (400)
T 4amg_A 87 DDTDVTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARSWRPDLVVHTPTQGAGPLT-AAALQLPCVELPLGPADSEPG 165 (400)
T ss_dssp CC------------CHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEECTTCTHHHHH-HHHTTCCEEECCSSTTTCCHH
T ss_pred cccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECcchHHHHHH-HHHcCCCceeecccccccccc
Confidence 00000 00011112223333344455677888899999999999988888889 999999999865432211100
Q ss_pred HhccccccCCcccccCCCCCCCCCCccCCCChhhhhhhhhhhhcCCCCchhhhhcccccCCccEEEEcCccccccchHHH
Q 037721 152 LVVPARKLNNSLADLMKSPDGFPATSITSLDEFVARDYLYVYTKFNGGPSVYERGIQGVDGCDVLAIKTCNEMEGPYLDF 231 (465)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~ 231 (465)
+.......+.... .+..-.............+ +....
T Consensus 166 -----------------------------~~~~~~~~l~~~~----------~~~~~~~~~~~~~~~~~~~----~~~~~ 202 (400)
T 4amg_A 166 -----------------------------LGALIRRAMSKDY----------ERHGVTGEPTGSVRLTTTP----PSVEA 202 (400)
T ss_dssp -----------------------------HHHHHHHHTHHHH----------HHTTCCCCCSCEEEEECCC----HHHHH
T ss_pred -----------------------------hhhHHHHHHHHHH----------HHhCCCcccccchhhcccC----chhhc
Confidence 0000000000000 0110001111111111111 00000
Q ss_pred HH--hhCCCCeEeeccCCCCCCCCCcchhhhccccCCCCCCeEEEEEeCCcccCC--HHHHHHHHHHHHhcCCCeEEEEc
Q 037721 232 VR--TQFKKPVLLTGPLVNPEPPSGELEERWAKWLCKYPPKSVIYCSFGSETFLT--VDQIKELAIGLEITGLPFFLVLN 307 (465)
Q Consensus 232 ~~--~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~--~~~~~~i~~al~~~~~~~i~~~~ 307 (465)
.. ....+....+.+. . ......+.+|++..+++++|||||||..... .+.+..++++++..+.+++|..+
T Consensus 203 ~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~ 276 (400)
T 4amg_A 203 LLPEDRRSPGAWPMRYV-P-----YNGGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLG 276 (400)
T ss_dssp TSCGGGCCTTCEECCCC-C-----CCCCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECC
T ss_pred cCcccccCCcccCcccc-c-----ccccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEec
Confidence 00 0011122222222 1 1123344568888888999999999987543 36788899999999999999987
Q ss_pred CCCCCCCcccccccCChhhhhhcCCCceEEecccchHhhhccccceeecccCChhhHHHHHHhCCceeeccccccchhhH
Q 037721 308 FPPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRHESVGCYVCHSGFSSVTEAVISDCQLVLLPLKGDQFLNS 387 (465)
Q Consensus 308 ~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~~~~~~~ItHgG~~s~~Eal~~GvP~l~~P~~~DQ~~na 387 (465)
..... ....+|+ |+.+.+|+||.++|+|+++ ||||||+||++||+++|||+|++|+++||+.||
T Consensus 277 ~~~~~-----~~~~~~~---------~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na 340 (400)
T 4amg_A 277 GGDLA-----LLGELPA---------NVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNR 340 (400)
T ss_dssp TTCCC-----CCCCCCT---------TEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHH
T ss_pred Ccccc-----ccccCCC---------CEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHH
Confidence 75332 1334555 8999999999999999998 999999999999999999999999999999999
Q ss_pred HHHhhhhcceEEeeecCCCCccCHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHHHcCCchHHHHHHHH
Q 037721 388 KLVAGDLKAGVEVNRRDHDGHFGKEDIFKAVKTVMVDVNKEPGASIRANQKWWREFLLNGQIQDKFIADFV 458 (465)
Q Consensus 388 ~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~ 458 (465)
+++++. |+|+.++..+ .+++ +|+++|+ |++||++|+++++++++.++..++++.|.
T Consensus 341 ~~v~~~-G~g~~l~~~~----~~~~----al~~lL~------d~~~r~~a~~l~~~~~~~~~~~~~a~~le 396 (400)
T 4amg_A 341 DVLTGL-GIGFDAEAGS----LGAE----QCRRLLD------DAGLREAALRVRQEMSEMPPPAETAAXLV 396 (400)
T ss_dssp HHHHHH-TSEEECCTTT----CSHH----HHHHHHH------CHHHHHHHHHHHHHHHTSCCHHHHHHHHH
T ss_pred HHHHHC-CCEEEcCCCC----chHH----HHHHHHc------CHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 999998 9999998764 6654 6677888 89999999999999999987766665543
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=3.8e-42 Score=344.48 Aligned_cols=383 Identities=13% Similarity=0.050 Sum_probs=256.2
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhcccCCCCCeeEEEccCCCCCCCCCCCCCCCCCchHH
Q 037721 11 LHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSSLNLTPMADIIPLQIPHVDGLPPGLDSTSEMTPHM 90 (465)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 90 (465)
+||+|+++++.||++|+++||++|++|||+|+|++++.+.+.+.+.| ++|+.++....+.+ ... ........
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~g-----~~~~~i~~~~~~~~-~~~--~~~~~~~~ 72 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEVG-----VPHVPVGPSARAPI-QRA--KPLTAEDV 72 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTT-----CCEEECCC--------CC--SCCCHHHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHcC-----CeeeeCCCCHHHHh-hcc--cccchHHH
Confidence 48999999999999999999999999999999999998877787777 99999873211011 010 11111111
Q ss_pred HHHHHHHHHhhHHHHHHHHh-hcCCcEEEEcC-CCcc--cccccccccCCeeEEEecchHHHHHHHhccccccCCccccc
Q 037721 91 AELLKQALDLMQPQIKTLLS-QLKPHFVFFDF-THYW--LPGLVGSQLGIKTVNFSVFSAISQAYLVVPARKLNNSLADL 166 (465)
Q Consensus 91 ~~~~~~~~~~~~~~l~~~l~-~~~pD~vi~D~-~~~~--~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (465)
...+.. .....+.++.+ ..+||+||+|. +.++ +..+ |+.+|||++.+++++......+. +. .
T Consensus 73 ~~~~~~---~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~-A~~lgiP~v~~~~~~~~~~~~~~-p~---------~ 138 (415)
T 1iir_A 73 RRFTTE---AIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSV-AEKLGIPYFYAFHCPSYVPSPYY-PP---------P 138 (415)
T ss_dssp HHHHHH---HHHHHHHHHHHHTTTCSEEEEESCHHHHHHHHHH-HHHHTCCEEEEESSGGGSCCSSS-CC---------C
T ss_pred HHHHHH---HHHHHHHHHHHHhcCCCEEEECChhHhHhhHHHH-HHHhCCCEEEEecCCCcCCCccc-CC---------c
Confidence 111111 11223344443 56899999998 6677 7788 99999999998876643211000 00 0
Q ss_pred CCCCCCCCCCccCC-CChhhhhhh---------hhhhhcCCCCchhhhhcccccCCccEEEEcCcccccc-chHHHHHhh
Q 037721 167 MKSPDGFPATSITS-LDEFVARDY---------LYVYTKFNGGPSVYERGIQGVDGCDVLAIKTCNEMEG-PYLDFVRTQ 235 (465)
Q Consensus 167 ~~~~~~~p~~~~~~-~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~-~~~~~~~~~ 235 (465)
..+ ..+|+....+ +........ ....... ++.....+.+..... .++.++++++++ +. ..
T Consensus 139 ~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~~-----~~ 209 (415)
T 1iir_A 139 PLG-EPSTQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAI--GLPPVEDIFTFGYTD-HPWVAADPVLAPLQP-----TD 209 (415)
T ss_dssp C----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCCCCCCHHHHHHCS-SCEECSCTTTSCCCC-----CS
T ss_pred cCC-ccccchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHc--CCCCCCccccccCCC-CEEEeeChhhcCCCc-----cc
Confidence 000 0011100000 000000000 0011111 110000011111223 679999999886 31 12
Q ss_pred CCCCeEeeccCCCCCCCCCcchhhhccccCCCCCCeEEEEEeCCcccCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCc
Q 037721 236 FKKPVLLTGPLVNPEPPSGELEERWAKWLCKYPPKSVIYCSFGSETFLTVDQIKELAIGLEITGLPFFLVLNFPPNVDGQ 315 (465)
Q Consensus 236 ~~~~~~~vGp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~ 315 (465)
+ ++++|||+ ...+. ...+.++.+|++.. +++|||++||.. ...+.+..++++++..+.+++|+++.....
T Consensus 210 ~--~~~~vG~~-~~~~~-~~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~~v~~~g~~~~~--- 279 (415)
T 1iir_A 210 L--DAVQTGAW-ILPDE-RPLSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIRAHGRRVILSRGWADLV--- 279 (415)
T ss_dssp S--CCEECCCC-CCCCC-CCCCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHHHTTCCEEECTTCTTCC---
T ss_pred C--CeEeeCCC-ccCcc-cCCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHHHHHCCCeEEEEeCCCccc---
Confidence 2 68999999 65432 34567788898764 468999999987 567788889999999999999998765210
Q ss_pred ccccccCChhhhhhcCCCceEEecccchHhhhccccceeecccCChhhHHHHHHhCCceeeccccccchhhHHHHhhhhc
Q 037721 316 SELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRHESVGCYVCHSGFSSVTEAVISDCQLVLLPLKGDQFLNSKLVAGDLK 395 (465)
Q Consensus 316 ~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~~~~~~~ItHgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~G 395 (465)
...+| .|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|++|...||..||+++++. |
T Consensus 280 ---~~~~~---------~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g 344 (415)
T 1iir_A 280 ---LPDDG---------ADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAEL-G 344 (415)
T ss_dssp ---CSSCG---------GGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH-T
T ss_pred ---ccCCC---------CCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHC-C
Confidence 11222 38999999999999988777 999999999999999999999999999999999999998 9
Q ss_pred ceEEeeecCCCCccCHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHHHcCCchHHHHHHHHHH
Q 037721 396 AGVEVNRRDHDGHFGKEDIFKAVKTVMVDVNKEPGASIRANQKWWREFLLNGQIQDKFIADFVKD 460 (465)
Q Consensus 396 ~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~ 460 (465)
+|+.++.. .+++++|.++|+++ + +++++++++++++.++..++.++.++.+.+.
T Consensus 345 ~g~~~~~~----~~~~~~l~~~i~~l-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 398 (415)
T 1iir_A 345 VGVAHDGP----IPTFDSLSAALATA-L------TPETHARATAVAGTIRTDGAAVAARLLLDAV 398 (415)
T ss_dssp SEEECSSS----SCCHHHHHHHHHHH-T------SHHHHHHHHHHHHHSCSCHHHHHHHHHHHHH
T ss_pred CcccCCcC----CCCHHHHHHHHHHH-c------CHHHHHHHHHHHHHHhhcChHHHHHHHHHHH
Confidence 99999865 38999999999999 8 8999999999999998766666666555443
No 9
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=4.8e-41 Score=336.45 Aligned_cols=389 Identities=15% Similarity=0.140 Sum_probs=274.3
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhcccCCCCCeeEEEccCCCCCCCCCCCC----CCCC
Q 037721 10 QLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSSLNLTPMADIIPLQIPHVDGLPPGLD----STSE 85 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~~----~~~~ 85 (465)
.+||+|++.++.||++|++.||++|+++||+|+|++++.+.+.++..| +++..++. .++.... ....
T Consensus 20 m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~G-----~~~~~~~~----~~~~~~~~~~~~~~~ 90 (415)
T 3rsc_A 20 MAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAAG-----ATVVPYQS----EIIDADAAEVFGSDD 90 (415)
T ss_dssp CCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHTT-----CEEEECCC----STTTCCHHHHHHSSS
T ss_pred CCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhcC-----CEEEeccc----cccccccchhhcccc
Confidence 579999999999999999999999999999999999999888888888 99999872 2211100 0001
Q ss_pred CchHHHHH-HHHHHHhhHHHHHHHHhhcCCcEEEEc-CCCcccccccccccCCeeEEEecchHHHHHHHhccccccCCcc
Q 037721 86 MTPHMAEL-LKQALDLMQPQIKTLLSQLKPHFVFFD-FTHYWLPGLVGSQLGIKTVNFSVFSAISQAYLVVPARKLNNSL 163 (465)
Q Consensus 86 ~~~~~~~~-~~~~~~~~~~~l~~~l~~~~pD~vi~D-~~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~ 163 (465)
.. ..... +..........+.+++++++||+||+| ...+++..+ |+.+|||++.+.+.......... .+...
T Consensus 91 ~~-~~~~~~~~~~~~~~~~~l~~~l~~~~PDlVi~d~~~~~~~~~a-A~~~giP~v~~~~~~~~~~~~~~-~~~~~---- 163 (415)
T 3rsc_A 91 LG-VRPHLMYLRENVSVLRATAEALDGDVPDLVLYDDFPFIAGQLL-AARWRRPAVRLSAAFASNEHYSF-SQDMV---- 163 (415)
T ss_dssp SC-HHHHHHHHHHHHHHHHHHHHHHSSSCCSEEEEESTTHHHHHHH-HHHTTCCEEEEESSCCCCSSCCH-HHHHH----
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchhhhHHHHH-HHHhCCCEEEEEecccccCcccc-ccccc----
Confidence 11 11122 233333455778889999999999999 767777788 99999999988744321100000 00000
Q ss_pred cccCCCCCCCCCCccCCCChhhhhhhhhhhhcCCCCchhhhhcccccCCccEEEEcCccccccchHHHHHhhCCCCeEee
Q 037721 164 ADLMKSPDGFPATSITSLDEFVARDYLYVYTKFNGGPSVYERGIQGVDGCDVLAIKTCNEMEGPYLDFVRTQFKKPVLLT 243 (465)
Q Consensus 164 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~~~~~~v 243 (465)
.... ...|. . +. .....+..+...+..... ...+. ....+..+....+.+++. ...++.++.++
T Consensus 164 ~~~~---~~~p~--~--~~-~~~~~~~~~~~~~g~~~~-~~~~~--~~~~~~~l~~~~~~~~~~-----~~~~~~~~~~v 227 (415)
T 3rsc_A 164 TLAG---TIDPL--D--LP-VFRDTLRDLLAEHGLSRS-VVDCW--NHVEQLNLVFVPKAFQIA-----GDTFDDRFVFV 227 (415)
T ss_dssp HHHT---CCCGG--G--CH-HHHHHHHHHHHHTTCCCC-HHHHH--TCCCSEEEESSCTTTSTT-----GGGCCTTEEEC
T ss_pred cccc---cCChh--h--HH-HHHHHHHHHHHHcCCCCC-hhhhh--cCCCCeEEEEcCcccCCC-----cccCCCceEEe
Confidence 0000 00000 0 00 001111111111111100 01110 112266777666666542 34567789999
Q ss_pred ccCCCCCCCCCcchhhhccccCCCCCCeEEEEEeCCcccCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCcccccccCC
Q 037721 244 GPLVNPEPPSGELEERWAKWLCKYPPKSVIYCSFGSETFLTVDQIKELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLP 323 (465)
Q Consensus 244 Gp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp 323 (465)
||. ...+ .+..+|....+++++|||++||......+.+..++++++..+++++|.++.+.+.+ ....+|
T Consensus 228 Gp~-~~~~------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~----~l~~~~ 296 (415)
T 3rsc_A 228 GPC-FDDR------RFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGGQVDPA----ALGDLP 296 (415)
T ss_dssp CCC-CCCC------GGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTTTSCGG----GGCCCC
T ss_pred CCC-CCCc------ccCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCCCCChH----HhcCCC
Confidence 998 4432 22344665556678999999999877778899999999988899999888653211 122233
Q ss_pred hhhhhhcCCCceEEecccchHhhhccccceeecccCChhhHHHHHHhCCceeeccccccchhhHHHHhhhhcceEEeeec
Q 037721 324 PGFMDRVKDRGVVHTGWVQQQLILRHESVGCYVCHSGFSSVTEAVISDCQLVLLPLKGDQFLNSKLVAGDLKAGVEVNRR 403 (465)
Q Consensus 324 ~~~~~~~~~~nv~~~~~~pq~~vL~~~~~~~~ItHgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~ 403 (465)
.|+.+.+|+|+.++|+++++ ||||||+||++||+++|+|+|++|...||+.||+++++. |+|+.+...
T Consensus 297 ---------~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~-g~g~~~~~~ 364 (415)
T 3rsc_A 297 ---------PNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQL-GLGAVLPGE 364 (415)
T ss_dssp ---------TTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHH-TCEEECCGG
T ss_pred ---------CcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHc-CCEEEcccC
Confidence 38999999999999999998 999999999999999999999999999999999999999 999999876
Q ss_pred CCCCccCHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHh
Q 037721 404 DHDGHFGKEDIFKAVKTVMVDVNKEPGASIRANQKWWREFLLNGQIQDKFIADFVKDLKA 463 (465)
Q Consensus 404 ~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~l~~ 463 (465)
+ +++++|.++|.++|+ |++++++++++++.+.+.++.+++++.+.+.+++
T Consensus 365 ~----~~~~~l~~~i~~ll~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 414 (415)
T 3rsc_A 365 K----ADGDTLLAAVGAVAA------DPALLARVEAMRGHVRRAGGAARAADAVEAYLAR 414 (415)
T ss_dssp G----CCHHHHHHHHHHHHT------CHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred C----CCHHHHHHHHHHHHc------CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhc
Confidence 3 899999999999999 8999999999999999998888888888777654
No 10
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=1.7e-41 Score=339.80 Aligned_cols=378 Identities=14% Similarity=0.041 Sum_probs=257.5
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhcccCCCCCeeEEEccCCCCCCCCCCCCCCCCCchHH
Q 037721 11 LHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSSLNLTPMADIIPLQIPHVDGLPPGLDSTSEMTPHM 90 (465)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 90 (465)
+||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+++.| ++++.++....+.+.. . .........
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~g-----~~~~~~~~~~~~~~~~-~-~~~~~~~~~ 73 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEVG-----VPHVPVGLPQHMMLQE-G-MPPPPPEEE 73 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHT-----CCEEECSCCGGGCCCT-T-SCCCCHHHH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHcC-----CeeeecCCCHHHHHhh-c-cccchhHHH
Confidence 48999999999999999999999999999999999998888888888 9999987321111111 0 001111111
Q ss_pred HHHHHHHHHhhHHHHHHHHh--hcCCcEEEEcC-CCcc--cccccccccCCeeEEEecchHHHHHHHhccccccCCcccc
Q 037721 91 AELLKQALDLMQPQIKTLLS--QLKPHFVFFDF-THYW--LPGLVGSQLGIKTVNFSVFSAISQAYLVVPARKLNNSLAD 165 (465)
Q Consensus 91 ~~~~~~~~~~~~~~l~~~l~--~~~pD~vi~D~-~~~~--~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (465)
...+.. ....+.+.+. ..+||+||+|. +.++ +..+ |+.+|||++.+.+++......+. ++ .
T Consensus 74 ~~~~~~----~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~-A~~~giP~v~~~~~~~~~~~~~~-p~--------~ 139 (416)
T 1rrv_A 74 QRLAAM----TVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSV-AEKLGLPFFYSVPSPVYLASPHL-PP--------A 139 (416)
T ss_dssp HHHHHH----HHHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHH-HHHHTCCEEEEESSGGGSCCSSS-CC--------C
T ss_pred HHHHHH----HHHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHH-HHHcCCCEEEEeCCCCCCCCccc-CC--------C
Confidence 111111 1122222222 56899999997 4555 6778 99999999988776533210000 00 0
Q ss_pred cCCCCCCC-CCCccCC-CChhhhh---------hhhhhhhcCCCCchhhhhcccccCCccEEEEcCccccccchHHHHHh
Q 037721 166 LMKSPDGF-PATSITS-LDEFVAR---------DYLYVYTKFNGGPSVYERGIQGVDGCDVLAIKTCNEMEGPYLDFVRT 234 (465)
Q Consensus 166 ~~~~~~~~-p~~~~~~-~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~ 234 (465)
.. ..+ ++ ...+ +...... .+..+.... ++.....+.+..... .++++++++++++. .
T Consensus 140 ~~---~~~~~~-r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~-----~ 207 (416)
T 1rrv_A 140 YD---EPTTPG-VTDIRVLWEERAARFADRYGPTLNRRRAEI--GLPPVEDVFGYGHGE-RPLLAADPVLAPLQ-----P 207 (416)
T ss_dssp BC---SCCCTT-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCCCCSCHHHHTTCS-SCEECSCTTTSCCC-----S
T ss_pred CC---CCCCch-HHHHHHHHHHHHHHHHHHhHHHHHHHHHHc--CCCCCCchhhhccCC-CeEEccCccccCCC-----C
Confidence 00 001 11 0000 0000000 000111111 111000111112334 78999999998642 1
Q ss_pred hCCCCeEeeccCCCCCCCCCcchhhhccccCCCCCCeEEEEEeCCccc-CCHHHHHHHHHHHHhcCCCeEEEEcCCCCCC
Q 037721 235 QFKKPVLLTGPLVNPEPPSGELEERWAKWLCKYPPKSVIYCSFGSETF-LTVDQIKELAIGLEITGLPFFLVLNFPPNVD 313 (465)
Q Consensus 235 ~~~~~~~~vGp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~-~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~ 313 (465)
.+ ++++|||+ ...+. ...+.++.+|++.+ +++|||++||... ...+.+..++++++..+++++|+++.....
T Consensus 208 ~~--~~~~vG~~-~~~~~-~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~- 280 (416)
T 1rrv_A 208 DV--DAVQTGAW-LLSDE-RPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRGWTELV- 280 (416)
T ss_dssp SC--CCEECCCC-CCCCC-CCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEECTTTTCC-
T ss_pred CC--CeeeECCC-ccCcc-CCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHHHCCCeEEEEeCCcccc-
Confidence 12 68999998 65432 33567788898764 4689999999864 345678889999999999999998875210
Q ss_pred CcccccccCChhhhhhcCCCceEEecccchHhhhccccceeecccCChhhHHHHHHhCCceeeccccccchhhHHHHhhh
Q 037721 314 GQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRHESVGCYVCHSGFSSVTEAVISDCQLVLLPLKGDQFLNSKLVAGD 393 (465)
Q Consensus 314 ~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~~~~~~~ItHgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~ 393 (465)
...+| .|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|++|...||+.||+++++.
T Consensus 281 -----~~~~~---------~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~ 344 (416)
T 1rrv_A 281 -----LPDDR---------DDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAAL 344 (416)
T ss_dssp -----CSCCC---------TTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHH
T ss_pred -----ccCCC---------CCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHC
Confidence 11233 38999999999999988888 999999999999999999999999999999999999998
Q ss_pred hcceEEeeecCCCCccCHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHHHcCCchHHHHHHH
Q 037721 394 LKAGVEVNRRDHDGHFGKEDIFKAVKTVMVDVNKEPGASIRANQKWWREFLLNGQIQDKFIADF 457 (465)
Q Consensus 394 ~G~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~ 457 (465)
|+|+.++..+ +++++|.++|+++ . |++++++++++++.+++.++. ++++.+
T Consensus 345 -g~g~~~~~~~----~~~~~l~~~i~~l-~------~~~~~~~~~~~~~~~~~~~~~-~~~~~i 395 (416)
T 1rrv_A 345 -GIGVAHDGPT----PTFESLSAALTTV-L------APETRARAEAVAGMVLTDGAA-AAADLV 395 (416)
T ss_dssp -TSEEECSSSC----CCHHHHHHHHHHH-T------SHHHHHHHHHHTTTCCCCHHH-HHHHHH
T ss_pred -CCccCCCCCC----CCHHHHHHHHHHh-h------CHHHHHHHHHHHHHHhhcCcH-HHHHHH
Confidence 9999998653 8999999999999 8 899999999999999887777 666666
No 11
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=2.7e-40 Score=329.36 Aligned_cols=392 Identities=15% Similarity=0.167 Sum_probs=271.9
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhcccCCCCCeeEEEccCCCCCCCCCCCCCCCCCchH
Q 037721 10 QLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSSLNLTPMADIIPLQIPHVDGLPPGLDSTSEMTPH 89 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 89 (465)
.+||+|++.++.||++|++.||++|+++||+|+|++++.+.+.++..| +++..++.+.. ...............
T Consensus 4 M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~G-----~~~~~~~~~~~-~~~~~~~~~~~~~~~ 77 (402)
T 3ia7_A 4 QRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAAG-----AEVVLYKSEFD-TFHVPEVVKQEDAET 77 (402)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHTT-----CEEEECCCGGG-TSSSSSSSCCTTHHH
T ss_pred CCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHcC-----CEEEecccccc-cccccccccccchHH
Confidence 359999999999999999999999999999999999988888888888 99999873110 000000011111112
Q ss_pred HHHH-HHHHHHhhHHHHHHHHhhcCCcEEEEc-CCCcccccccccccCCeeEEEecchHHHHHHHhccccccCCcccccC
Q 037721 90 MAEL-LKQALDLMQPQIKTLLSQLKPHFVFFD-FTHYWLPGLVGSQLGIKTVNFSVFSAISQAYLVVPARKLNNSLADLM 167 (465)
Q Consensus 90 ~~~~-~~~~~~~~~~~l~~~l~~~~pD~vi~D-~~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (465)
.... +..........+.+++++++||+||+| .+.+++..+ |+.+|||++.+.+.......... .+... ....
T Consensus 78 ~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~a-A~~~giP~v~~~~~~~~~~~~~~-~~~~~----~~~~ 151 (402)
T 3ia7_A 78 QLHLVYVRENVAILRAAEEALGDNPPDLVVYDVFPFIAGRLL-AARWDRPAVRLTGGFAANEHYSL-FKELW----KSNG 151 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEESTTHHHHHHH-HHHHTCCEEEEESSCCCBTTBCH-HHHHH----HHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchHHHHHHHH-HHhhCCCEEEEecccccCccccc-ccccc----cccc
Confidence 2222 333333455778889999999999999 767777788 99999999988643321100000 00000 0000
Q ss_pred CCCCCCCCCccCCCChhhhhhhhhhhhcCCCCchh-hhhcccccCCccEEEEcCccccccchHHHHHhhCCCCeEeeccC
Q 037721 168 KSPDGFPATSITSLDEFVARDYLYVYTKFNGGPSV-YERGIQGVDGCDVLAIKTCNEMEGPYLDFVRTQFKKPVLLTGPL 246 (465)
Q Consensus 168 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~~~~~~vGp~ 246 (465)
...|. . +. .....+......+ ++.. ...+.. ...+..+....+++++. ...++.++.++||.
T Consensus 152 ---~~~~~-~---~~-~~~~~~~~~~~~~--g~~~~~~~~~~--~~~~~~l~~~~~~~~~~-----~~~~~~~~~~vGp~ 214 (402)
T 3ia7_A 152 ---QRHPA-D---VE-AVHSVLVDLLGKY--GVDTPVKEYWD--EIEGLTIVFLPKSFQPF-----AETFDERFAFVGPT 214 (402)
T ss_dssp ---CCCGG-G---SH-HHHHHHHHHHHTT--TCCSCHHHHHT--CCCSCEEESSCGGGSTT-----GGGCCTTEEECCCC
T ss_pred ---ccChh-h---HH-HHHHHHHHHHHHc--CCCCChhhhhc--CCCCeEEEEcChHhCCc-----cccCCCCeEEeCCC
Confidence 00000 0 00 0001111111111 1110 011110 11255666666555542 33457789999998
Q ss_pred CCCCCCCCcchhhhccccCCCCCCeEEEEEeCCcccCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhh
Q 037721 247 VNPEPPSGELEERWAKWLCKYPPKSVIYCSFGSETFLTVDQIKELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGF 326 (465)
Q Consensus 247 ~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~ 326 (465)
...+ .+...|....+++++|||++||......+.+..++++++..+.+++|.++.+.+.+ ....++
T Consensus 215 -~~~~------~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~----~~~~~~--- 280 (402)
T 3ia7_A 215 -LTGR------DGQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGFLDPA----VLGPLP--- 280 (402)
T ss_dssp -CCC----------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTTSCGG----GGCSCC---
T ss_pred -CCCc------ccCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCcCChh----hhCCCC---
Confidence 4432 12334665556678999999999877778899999999988888999887653211 112233
Q ss_pred hhhcCCCceEEecccchHhhhccccceeecccCChhhHHHHHHhCCceeeccc-cccchhhHHHHhhhhcceEEeeecCC
Q 037721 327 MDRVKDRGVVHTGWVQQQLILRHESVGCYVCHSGFSSVTEAVISDCQLVLLPL-KGDQFLNSKLVAGDLKAGVEVNRRDH 405 (465)
Q Consensus 327 ~~~~~~~nv~~~~~~pq~~vL~~~~~~~~ItHgG~~s~~Eal~~GvP~l~~P~-~~DQ~~na~~v~~~~G~G~~l~~~~~ 405 (465)
.|+.+.+|+|+.++|+++++ ||||||+||++||+++|+|+|++|. ..||..||+++++. |+|+.+...+
T Consensus 281 ------~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~-g~g~~~~~~~- 350 (402)
T 3ia7_A 281 ------PNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIEL-GLGSVLRPDQ- 350 (402)
T ss_dssp ------TTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHT-TSEEECCGGG-
T ss_pred ------CcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHc-CCEEEccCCC-
Confidence 38999999999999999998 9999999999999999999999999 99999999999999 9999998763
Q ss_pred CCccCHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHh
Q 037721 406 DGHFGKEDIFKAVKTVMVDVNKEPGASIRANQKWWREFLLNGQIQDKFIADFVKDLKA 463 (465)
Q Consensus 406 ~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~l~~ 463 (465)
++++.|.++|.++|+ |++++++++++++.+.+.++..++++.+.+.+++
T Consensus 351 ---~~~~~l~~~~~~ll~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 399 (402)
T 3ia7_A 351 ---LEPASIREAVERLAA------DSAVRERVRRMQRDILSSGGPARAADEVEAYLGR 399 (402)
T ss_dssp ---CSHHHHHHHHHHHHH------CHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHHc------CHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhh
Confidence 899999999999999 8999999999999999988888888888777654
No 12
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=3.9e-40 Score=328.54 Aligned_cols=377 Identities=14% Similarity=0.074 Sum_probs=259.3
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhcccCCCCCeeEEEccCCCCCCCCCCCCCCCCCchHH
Q 037721 11 LHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSSLNLTPMADIIPLQIPHVDGLPPGLDSTSEMTPHM 90 (465)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 90 (465)
+||+|++.++.||++|++.||++|++|||+|+|++++.+.+.++..| ++|..++... ... .... ... ....
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~g-----~~~~~l~~~~-~~~-~~~~-~~~-~~~~ 71 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEVG-----VPMVPVGRAV-RAG-AREP-GEL-PPGA 71 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHTT-----CCEEECSSCS-SGG-GSCT-TCC-CTTC
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHcC-----CceeecCCCH-HHH-hccc-cCC-HHHH
Confidence 47999999999999999999999999999999999999989998888 9999987221 111 0000 000 0011
Q ss_pred HHHHHHHHHhhHHHHHHHHhhcCCcEEEEcCCCccc---ccccccccCCeeEEEecchHHHHHHHhcc-ccccCCccccc
Q 037721 91 AELLKQALDLMQPQIKTLLSQLKPHFVFFDFTHYWL---PGLVGSQLGIKTVNFSVFSAISQAYLVVP-ARKLNNSLADL 166 (465)
Q Consensus 91 ~~~~~~~~~~~~~~l~~~l~~~~pD~vi~D~~~~~~---~~~~A~~~giP~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 166 (465)
...+........+.+.++++ +||+||+|.....+ ..+ |+.+|||++.+..++.......... ....
T Consensus 72 ~~~~~~~~~~~~~~l~~~~~--~pD~Vi~~~~~~~~~~a~~~-A~~lgiP~v~~~~~p~~~~~~~~~~~~~~~------- 141 (404)
T 3h4t_A 72 AEVVTEVVAEWFDKVPAAIE--GCDAVVTTGLLPAAVAVRSM-AEKLGIPYRYTVLSPDHLPSEQSQAERDMY------- 141 (404)
T ss_dssp GGGHHHHHHHHHHHHHHHHT--TCSEEEEEECHHHHHHHHHH-HHHHTCCEEEEESSGGGSGGGSCHHHHHHH-------
T ss_pred HHHHHHHHHHHHHHHHHHhc--CCCEEEECCchhhhhhhhhH-HhhcCCCEEEEEcCCccCCChhHHHHHHHH-------
Confidence 11222233333344455443 69999998655554 567 9999999998877654211000000 0000
Q ss_pred CCCCCCCCCCccCCCChhhhhhhh-hhhhcCCCCchhhhhcccccCCccEEEEcCccccccchHHHHHhhCCCCeEeecc
Q 037721 167 MKSPDGFPATSITSLDEFVARDYL-YVYTKFNGGPSVYERGIQGVDGCDVLAIKTCNEMEGPYLDFVRTQFKKPVLLTGP 245 (465)
Q Consensus 167 ~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~~~~~~vGp 245 (465)
+. ..+..+.... ...... ++......... ...+..+.+..+.+.+.. .+++++.++|+
T Consensus 142 ---------~~---~~~~~~~~~~~~~~~~l--gl~~~~~~~~~-~~~~~~l~~~~~~l~p~~------~~~~~~~~~G~ 200 (404)
T 3h4t_A 142 ---------NQ---GADRLFGDAVNSHRASI--GLPPVEHLYDY-GYTDQPWLAADPVLSPLR------PTDLGTVQTGA 200 (404)
T ss_dssp ---------HH---HHHHHHHHHHHHHHHHT--TCCCCCCHHHH-HHCSSCEECSCTTTSCCC------TTCCSCCBCCC
T ss_pred ---------HH---HHHHHhHHHHHHHHHHc--CCCCCcchhhc-cccCCeEEeeCcceeCCC------CCCCCeEEeCc
Confidence 00 0000000000 001111 11100000000 011223556666665431 34568889998
Q ss_pred CCCCCCCCCcchhhhccccCCCCCCeEEEEEeCCcccCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChh
Q 037721 246 LVNPEPPSGELEERWAKWLCKYPPKSVIYCSFGSETFLTVDQIKELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPG 325 (465)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~ 325 (465)
+ .... ...+++++.+|++.. +++|||++||... ..+.+..++++++..+++++|.++..... ....
T Consensus 201 ~-~~~~-~~~~~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~~~~~------~~~~--- 266 (404)
T 3h4t_A 201 W-ILPD-QRPLSAELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGWAGLG------RIDE--- 266 (404)
T ss_dssp C-CCCC-CCCCCHHHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTTTTCC------CSSC---
T ss_pred c-ccCC-CCCCCHHHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCCcccc------cccC---
Confidence 7 4433 245677888888753 5699999999987 66788899999999999999998865211 1112
Q ss_pred hhhhcCCCceEEecccchHhhhccccceeecccCChhhHHHHHHhCCceeeccccccchhhHHHHhhhhcceEEeeecCC
Q 037721 326 FMDRVKDRGVVHTGWVQQQLILRHESVGCYVCHSGFSSVTEAVISDCQLVLLPLKGDQFLNSKLVAGDLKAGVEVNRRDH 405 (465)
Q Consensus 326 ~~~~~~~~nv~~~~~~pq~~vL~~~~~~~~ItHgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 405 (465)
..|+.+.+|+||.++|+++++ ||||||+||+.||+++|||+|++|+.+||+.||+++++. |+|+.+...+
T Consensus 267 ------~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~-G~g~~l~~~~- 336 (404)
T 3h4t_A 267 ------GDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADL-GVGVAHDGPT- 336 (404)
T ss_dssp ------CTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH-TSEEECSSSS-
T ss_pred ------CCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHC-CCEeccCcCC-
Confidence 348999999999999999888 999999999999999999999999999999999999998 9999998763
Q ss_pred CCccCHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Q 037721 406 DGHFGKEDIFKAVKTVMVDVNKEPGASIRANQKWWREFLLNGQIQDKFIADFVKDLK 462 (465)
Q Consensus 406 ~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~l~ 462 (465)
+++++|.++|+++++ ++|+++++++++.+.+ .+.+++++.+.+.++
T Consensus 337 ---~~~~~l~~ai~~ll~-------~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~ 382 (404)
T 3h4t_A 337 ---PTVESLSAALATALT-------PGIRARAAAVAGTIRT-DGTTVAAKLLLEAIS 382 (404)
T ss_dssp ---CCHHHHHHHHHHHTS-------HHHHHHHHHHHTTCCC-CHHHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHhC-------HHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHh
Confidence 899999999999995 6899999999999998 778888777776654
No 13
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=3.7e-39 Score=324.30 Aligned_cols=388 Identities=14% Similarity=0.143 Sum_probs=261.9
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhcccCCCCCeeEEEccCCCCCCCCCCCCCC---C
Q 037721 8 ADQLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSSLNLTPMADIIPLQIPHVDGLPPGLDST---S 84 (465)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~---~ 84 (465)
++.+||+|++.++.||++|++.|+++|+++||+|+++++....+.+.+.| ++++.++ ..++...... .
T Consensus 5 m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~~g-----~~~~~~~----~~~~~~~~~~~~~~ 75 (430)
T 2iyf_A 5 TTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAATG-----PRPVLYH----STLPGPDADPEAWG 75 (430)
T ss_dssp ---CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHTTS-----CEEEECC----CCSCCTTSCGGGGC
T ss_pred cccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHhCC-----CEEEEcC----CcCccccccccccc
Confidence 44579999999999999999999999999999999999998877777777 8998886 2222111110 0
Q ss_pred CCchHHHHHHHHHHHhhHHHHHHHHhhcCCcEEEEcCCCcccccccccccCCeeEEEecchHHHHHHHhccccccCCccc
Q 037721 85 EMTPHMAELLKQALDLMQPQIKTLLSQLKPHFVFFDFTHYWLPGLVGSQLGIKTVNFSVFSAISQAYLVVPARKLNNSLA 164 (465)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~vi~D~~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (465)
......+..+..........+.+++++.+||+||+|.+.+++..+ |+.+|||++.+++.......+...+.... ..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~-A~~~giP~v~~~~~~~~~~~~~~~~~~~~---~~ 151 (430)
T 2iyf_A 76 STLLDNVEPFLNDAIQALPQLADAYADDIPDLVLHDITSYPARVL-ARRWGVPAVSLSPNLVAWKGYEEEVAEPM---WR 151 (430)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHTTSCCSEEEEETTCHHHHHH-HHHHTCCEEEEESSCCCCTTHHHHTHHHH---HH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEECCccHHHHHH-HHHcCCCEEEEecccccccccccccccch---hh
Confidence 011122222222233455778888999999999999876777788 99999999988764421100000000000 00
Q ss_pred ccCCCCCCCCCCccCCCChhhhhhhhhhhhcCCCCchhhhhcccccCCccEEEEcCccccccchHHHHHhhCCCC-eEee
Q 037721 165 DLMKSPDGFPATSITSLDEFVARDYLYVYTKFNGGPSVYERGIQGVDGCDVLAIKTCNEMEGPYLDFVRTQFKKP-VLLT 243 (465)
Q Consensus 165 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~~~-~~~v 243 (465)
.. ..++. ..+ ....+.......... ... .......+.+++++.+++++.. ..++++ ++++
T Consensus 152 ~~----~~~~~-----~~~-~~~~~~~~~~~~g~~-~~~---~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~~v~~v 212 (430)
T 2iyf_A 152 EP----RQTER-----GRA-YYARFEAWLKENGIT-EHP---DTFASHPPRSLVLIPKALQPHA-----DRVDEDVYTFV 212 (430)
T ss_dssp HH----HHSHH-----HHH-HHHHHHHHHHHTTCC-SCH---HHHHHCCSSEEECSCGGGSTTG-----GGSCTTTEEEC
T ss_pred hh----ccchH-----HHH-HHHHHHHHHHHhCCC-CCH---HHHhcCCCcEEEeCcHHhCCCc-----ccCCCccEEEe
Confidence 00 00000 000 001111111111100 000 0111246788999988887642 245567 9999
Q ss_pred ccCCCCCCCCCcchhhhccccCCCCCCeEEEEEeCCcccCCHHHHHHHHHHHHhc-CCCeEEEEcCCCCCCCcccccccC
Q 037721 244 GPLVNPEPPSGELEERWAKWLCKYPPKSVIYCSFGSETFLTVDQIKELAIGLEIT-GLPFFLVLNFPPNVDGQSELVRTL 322 (465)
Q Consensus 244 Gp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~i~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~l 322 (465)
||. .+... +..+|.+..+++++|||++||......+.+..++++++.. +++++|.++.+...+ ....+
T Consensus 213 G~~-~~~~~------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~~----~l~~~ 281 (430)
T 2iyf_A 213 GAC-QGDRA------EEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRKVTPA----ELGEL 281 (430)
T ss_dssp CCC-C-----------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC---CGG----GGCSC
T ss_pred CCc-CCCCC------CCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCCCChH----HhccC
Confidence 986 43211 1234665555678999999999855568888899999875 788888887653211 01122
Q ss_pred ChhhhhhcCCCceEEecccchHhhhccccceeecccCChhhHHHHHHhCCceeeccccccchhhHHHHhhhhcceEEeee
Q 037721 323 PPGFMDRVKDRGVVHTGWVQQQLILRHESVGCYVCHSGFSSVTEAVISDCQLVLLPLKGDQFLNSKLVAGDLKAGVEVNR 402 (465)
Q Consensus 323 p~~~~~~~~~~nv~~~~~~pq~~vL~~~~~~~~ItHgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~ 402 (465)
+ .|+.+.+|+||.++|+++++ ||||||+||++||+++|+|+|++|..+||..|++++++. |+|+.++.
T Consensus 282 ~---------~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~-g~g~~~~~ 349 (430)
T 2iyf_A 282 P---------DNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQGL-GVARKLAT 349 (430)
T ss_dssp C---------TTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHT-TSEEECCC
T ss_pred C---------CCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHHc-CCEEEcCC
Confidence 2 48999999999999999998 999999999999999999999999999999999999998 99999886
Q ss_pred cCCCCccCHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHHHcCCchHHHHHHHHHH
Q 037721 403 RDHDGHFGKEDIFKAVKTVMVDVNKEPGASIRANQKWWREFLLNGQIQDKFIADFVKD 460 (465)
Q Consensus 403 ~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~ 460 (465)
.+ +++++|.++|.++++ |+++++++.++++.+.+.++.++.++.+.+.
T Consensus 350 ~~----~~~~~l~~~i~~ll~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 397 (430)
T 2iyf_A 350 EE----ATADLLRETALALVD------DPEVARRLRRIQAEMAQEGGTRRAADLIEAE 397 (430)
T ss_dssp C-----CCHHHHHHHHHHHHH------CHHHHHHHHHHHHHHHHHCHHHHHHHHHHTT
T ss_pred CC----CCHHHHHHHHHHHHc------CHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 53 799999999999999 8999999999999998777667666666543
No 14
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=8.7e-39 Score=322.62 Aligned_cols=387 Identities=15% Similarity=0.129 Sum_probs=252.3
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhcccCCCCCeeEEEccCCCC-CCCCCC---------
Q 037721 10 QLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSSLNLTPMADIIPLQIPHV-DGLPPG--------- 79 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~~g~~~~~~~~~~l~~~~~-~~~~~~--------- 79 (465)
.+||+|++.++.||++|+++||++|+++||+|+|++++.+.+.++..| ++|+.++.... .++...
T Consensus 20 ~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~~G-----~~~~~i~~~~~~~~~~~~~~~~~~~~~ 94 (441)
T 2yjn_A 20 HMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAAG-----LTAVPVGTDVDLVDFMTHAGHDIIDYV 94 (441)
T ss_dssp CCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHTTT-----CCEEECSCCCCHHHHHHHTTHHHHHHH
T ss_pred ccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHhCC-----CceeecCCccchHHHhhhhhccccccc
Confidence 579999999999999999999999999999999999998888888887 99999872100 000000
Q ss_pred --CCCC---CC-CchHHH----HHHHHHHH-----h-hHHHHHHHHhhcCCcEEEEcCCCcccccccccccCCeeEEEec
Q 037721 80 --LDST---SE-MTPHMA----ELLKQALD-----L-MQPQIKTLLSQLKPHFVFFDFTHYWLPGLVGSQLGIKTVNFSV 143 (465)
Q Consensus 80 --~~~~---~~-~~~~~~----~~~~~~~~-----~-~~~~l~~~l~~~~pD~vi~D~~~~~~~~~~A~~~giP~v~~~~ 143 (465)
.... .. ...... ..+..... . ....+.+++++++||+||+|...+++..+ |+.+|||++.+..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~~~a-A~~lgiP~v~~~~ 173 (441)
T 2yjn_A 95 RSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKWRPDLVIWEPLTFAAPIA-AAVTGTPHARLLW 173 (441)
T ss_dssp TTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHHCCSEEEECTTCTHHHHH-HHHHTCCEEEECS
T ss_pred ccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhcCCCEEEecCcchhHHHH-HHHcCCCEEEEec
Confidence 0000 00 011111 11111111 1 44566777788899999999977777788 9999999998865
Q ss_pred chHHHHHHHhccccccCCcccccCCCCCCCCCCccCCCChhhhhhhhhhhhcCCCCchhhhhcccccCCccEEEEcCccc
Q 037721 144 FSAISQAYLVVPARKLNNSLADLMKSPDGFPATSITSLDEFVARDYLYVYTKFNGGPSVYERGIQGVDGCDVLAIKTCNE 223 (465)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 223 (465)
.+.............. ...|... ........+.......... ..... +...+.++..+.+.
T Consensus 174 ~~~~~~~~~~~~~~~~-----------~~~~~~~---~~~~~~~~l~~~~~~~g~~-~~~~~----~~~~~~~l~~~~~~ 234 (441)
T 2yjn_A 174 GPDITTRARQNFLGLL-----------PDQPEEH---REDPLAEWLTWTLEKYGGP-AFDEE----VVVGQWTIDPAPAA 234 (441)
T ss_dssp SCCHHHHHHHHHHHHG-----------GGSCTTT---CCCHHHHHHHHHHHHTTCC-CCCGG----GTSCSSEEECSCGG
T ss_pred CCCcchhhhhhhhhhc-----------ccccccc---ccchHHHHHHHHHHHcCCC-CCCcc----ccCCCeEEEecCcc
Confidence 4322111110000000 0001000 1111111111222221110 00000 11234455555555
Q ss_pred cccchHHHHHhhCCCCeEeeccCCCCCCCCCcchhhhccccCCCCCCeEEEEEeCCcccC---CHHHHHHHHHHHHhcCC
Q 037721 224 MEGPYLDFVRTQFKKPVLLTGPLVNPEPPSGELEERWAKWLCKYPPKSVIYCSFGSETFL---TVDQIKELAIGLEITGL 300 (465)
Q Consensus 224 l~~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~---~~~~~~~i~~al~~~~~ 300 (465)
++++. .++. ..+++. ... .+.++.+|++..+++++|||++||.... ..+.+..++++++..++
T Consensus 235 ~~~~~------~~~~--~~~~~~-~~~-----~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~~~ 300 (441)
T 2yjn_A 235 IRLDT------GLKT--VGMRYV-DYN-----GPSVVPEWLHDEPERRRVCLTLGISSRENSIGQVSIEELLGAVGDVDA 300 (441)
T ss_dssp GSCCC------CCCE--EECCCC-CCC-----SSCCCCGGGSSCCSSCEEEEEC----------CCSTTTTHHHHHTSSS
T ss_pred ccCCC------CCCC--Cceeee-CCC-----CCcccchHhhcCCCCCEEEEECCCCcccccChHHHHHHHHHHHHcCCC
Confidence 54311 1110 122222 111 2234567887666678999999998754 23567778899988899
Q ss_pred CeEEEEcCCCCCCCcccccccCChhhhhhcCCCceEEecccchHhhhccccceeecccCChhhHHHHHHhCCceeecccc
Q 037721 301 PFFLVLNFPPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRHESVGCYVCHSGFSSVTEAVISDCQLVLLPLK 380 (465)
Q Consensus 301 ~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~~~~~~~ItHgG~~s~~Eal~~GvP~l~~P~~ 380 (465)
+++|.++...... ...+| .|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|++|..
T Consensus 301 ~~v~~~g~~~~~~-----l~~~~---------~~v~~~~~~~~~~ll~~ad~--~V~~~G~~t~~Ea~~~G~P~i~~p~~ 364 (441)
T 2yjn_A 301 EIIATFDAQQLEG-----VANIP---------DNVRTVGFVPMHALLPTCAA--TVHHGGPGSWHTAAIHGVPQVILPDG 364 (441)
T ss_dssp EEEECCCTTTTSS-----CSSCC---------SSEEECCSCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCS
T ss_pred EEEEEECCcchhh-----hccCC---------CCEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCc
Confidence 9999987542111 11223 38999999999999988888 99999999999999999999999999
Q ss_pred ccchhhHHHHhhhhcceEEeeecCCCCccCHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHHHcCCchHHHHHHHHHH
Q 037721 381 GDQFLNSKLVAGDLKAGVEVNRRDHDGHFGKEDIFKAVKTVMVDVNKEPGASIRANQKWWREFLLNGQIQDKFIADFVKD 460 (465)
Q Consensus 381 ~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~ 460 (465)
.||+.||+++++. |+|+.++..+ +++++|.++|.++++ |++++++++++++.+.+.++..+.++.+.+.
T Consensus 365 ~dQ~~na~~l~~~-g~g~~~~~~~----~~~~~l~~~i~~ll~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 433 (441)
T 2yjn_A 365 WDTGVRAQRTQEF-GAGIALPVPE----LTPDQLRESVKRVLD------DPAHRAGAARMRDDMLAEPSPAEVVGICEEL 433 (441)
T ss_dssp HHHHHHHHHHHHH-TSEEECCTTT----CCHHHHHHHHHHHHH------CHHHHHHHHHHHHHHHTSCCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHc-CCEEEccccc----CCHHHHHHHHHHHhc------CHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 9999999999998 9999998653 899999999999999 8999999999999999988888887777665
Q ss_pred HH
Q 037721 461 LK 462 (465)
Q Consensus 461 l~ 462 (465)
++
T Consensus 434 ~~ 435 (441)
T 2yjn_A 434 AA 435 (441)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=1.4e-38 Score=315.32 Aligned_cols=363 Identities=10% Similarity=0.073 Sum_probs=253.8
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhcccCCCCCeeEEEccCCCCCCC-CC---CCCCCCCC
Q 037721 11 LHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSSLNLTPMADIIPLQIPHVDGL-PP---GLDSTSEM 86 (465)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~~g~~~~~~~~~~l~~~~~~~~-~~---~~~~~~~~ 86 (465)
+||++++.++.||++|+++|+++|+++||+|++++++...+.++..| +++..++.....+. .. ......+.
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGVG-----LPAVATTDLPIRHFITTDREGRPEAIPS 75 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTT-----CCEEESCSSCHHHHHHBCTTSCBCCCCC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhCC-----CEEEEeCCcchHHHHhhhcccCccccCc
Confidence 48999999999999999999999999999999999988777777777 88888862100000 00 00000001
Q ss_pred chHHH----HH-HHHHHHhhHHHHHHHHhhcCCcEEEEcCCCcccccccccccCCeeEEEecchHHHHHHHhccccccCC
Q 037721 87 TPHMA----EL-LKQALDLMQPQIKTLLSQLKPHFVFFDFTHYWLPGLVGSQLGIKTVNFSVFSAISQAYLVVPARKLNN 161 (465)
Q Consensus 87 ~~~~~----~~-~~~~~~~~~~~l~~~l~~~~pD~vi~D~~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~ 161 (465)
..... .. +..........+.+++++.+||+||+|.+.+++..+ |+.+|||++.+...+..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~~~~~~-a~~~giP~v~~~~~~~~-------------- 140 (384)
T 2p6p_A 76 DPVAQARFTGRWFARMAASSLPRMLDFSRAWRPDLIVGGTMSYVAPLL-ALHLGVPHARQTWDAVD-------------- 140 (384)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHH-HHHHTCCEEEECCSSCC--------------
T ss_pred chHHHHHHHHHHHHhhHHHHHHHHHHHHhccCCcEEEECcchhhHHHH-HHhcCCCEEEeccCCcc--------------
Confidence 00111 11 112222345677788888999999999877777788 99999999987532100
Q ss_pred cccccCCCCCCCCCCccCCCChhhhhhhhhhhhcCCCCchhhhhcccccCCccEEEEcCccccccchHHHHHhhCC-CCe
Q 037721 162 SLADLMKSPDGFPATSITSLDEFVARDYLYVYTKFNGGPSVYERGIQGVDGCDVLAIKTCNEMEGPYLDFVRTQFK-KPV 240 (465)
Q Consensus 162 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~-~~~ 240 (465)
... +.......+......+ ++ .....++.++.++.+.++++. .++ .++
T Consensus 141 -----------~~~-----~~~~~~~~~~~~~~~~--g~-------~~~~~~~~~l~~~~~~~~~~~------~~~~~~~ 189 (384)
T 2p6p_A 141 -----------ADG-----IHPGADAELRPELSEL--GL-------ERLPAPDLFIDICPPSLRPAN------AAPARMM 189 (384)
T ss_dssp -----------CTT-----THHHHHHHTHHHHHHT--TC-------SSCCCCSEEEECSCGGGSCTT------SCCCEEC
T ss_pred -----------cch-----hhHHHHHHHHHHHHHc--CC-------CCCCCCCeEEEECCHHHCCCC------CCCCCce
Confidence 000 1000000000111110 00 001126788888888777532 121 223
Q ss_pred EeeccCCCCCCCCCcchhhhccccCCCCCCeEEEEEeCCcccC-----CHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCc
Q 037721 241 LLTGPLVNPEPPSGELEERWAKWLCKYPPKSVIYCSFGSETFL-----TVDQIKELAIGLEITGLPFFLVLNFPPNVDGQ 315 (465)
Q Consensus 241 ~~vGp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~-----~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~ 315 (465)
.+++ . . .+.++.+|++..+++++|||++||.... +.+.+..++++++..+++++|+++..
T Consensus 190 ~~~~-~-~-------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~------ 254 (384)
T 2p6p_A 190 RHVA-T-S-------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAPDT------ 254 (384)
T ss_dssp CCCC-C-C-------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEECCHH------
T ss_pred EecC-C-C-------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEEEeCCC------
Confidence 3332 1 1 1234556776645567999999998764 45778889999998899999987642
Q ss_pred ccccccCChhhhhhcCCCceEEecccchHhhhccccceeecccCChhhHHHHHHhCCceeeccccccchhhHHHHhhhhc
Q 037721 316 SELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRHESVGCYVCHSGFSSVTEAVISDCQLVLLPLKGDQFLNSKLVAGDLK 395 (465)
Q Consensus 316 ~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~~~~~~~ItHgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~G 395 (465)
... .+.. ...|+.+ +|+||.++|+++++ ||||||+||++||+++|+|+|++|...||..||+++++. |
T Consensus 255 --~~~----~l~~--~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~-g 322 (384)
T 2p6p_A 255 --VAE----ALRA--EVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADY-G 322 (384)
T ss_dssp --HHH----HHHH--HCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHH-T
T ss_pred --CHH----hhCC--CCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHHHHHC-C
Confidence 011 1110 1348889 99999999999888 999999999999999999999999999999999999998 9
Q ss_pred ceEEeeecCCCCccCHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHHHcCCchHHHHHHHHHHH
Q 037721 396 AGVEVNRRDHDGHFGKEDIFKAVKTVMVDVNKEPGASIRANQKWWREFLLNGQIQDKFIADFVKDL 461 (465)
Q Consensus 396 ~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~l 461 (465)
+|+.++.. .+++++|.++|.++|+ |++++++++++++.+++.++.+++++.+.+.+
T Consensus 323 ~g~~~~~~----~~~~~~l~~~i~~ll~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 378 (384)
T 2p6p_A 323 AAIALLPG----EDSTEAIADSCQELQA------KDTYARRAQDLSREISGMPLPATVVTALEQLA 378 (384)
T ss_dssp SEEECCTT----CCCHHHHHHHHHHHHH------CHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred CeEecCcC----CCCHHHHHHHHHHHHc------CHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence 99998865 3899999999999999 89999999999999999998888887776554
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=3e-36 Score=300.00 Aligned_cols=366 Identities=15% Similarity=0.160 Sum_probs=235.8
Q ss_pred CCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhcccCCCCCeeEEEccCCC-CCCCC----C-CC
Q 037721 7 EADQLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSSLNLTPMADIIPLQIPH-VDGLP----P-GL 80 (465)
Q Consensus 7 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~~g~~~~~~~~~~l~~~~-~~~~~----~-~~ 80 (465)
+..++||+|++.++.||++|++.|+++|+++||+|++++++...+.+...| +.+..++... ...+. . ..
T Consensus 12 ~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~G-----~~~~~~~~~~~~~~~~~~~~~~~~ 86 (398)
T 4fzr_A 12 RGSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGAG-----LPFAPTCPSLDMPEVLSWDREGNR 86 (398)
T ss_dssp ---CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHTT-----CCEEEEESSCCHHHHHSBCTTSCB
T ss_pred CCCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhCC-----CeeEecCCccchHhhhhhhccCcc
Confidence 355789999999999999999999999999999999999988888888888 8888886210 00000 0 00
Q ss_pred CCCCCCch----HHHHHHHHHHHhhHHHHHHHHhhcCCcEEEEcCCCcccccccccccCCeeEEEecchHHHHHHHhccc
Q 037721 81 DSTSEMTP----HMAELLKQALDLMQPQIKTLLSQLKPHFVFFDFTHYWLPGLVGSQLGIKTVNFSVFSAISQAYLVVPA 156 (465)
Q Consensus 81 ~~~~~~~~----~~~~~~~~~~~~~~~~l~~~l~~~~pD~vi~D~~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~ 156 (465)
........ .....+..........+.+++++++||+|++|...+++..+ |+.+|||++.+...........
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~~~~-a~~~giP~v~~~~~~~~~~~~~---- 161 (398)
T 4fzr_A 87 TTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERWKPDLVLTETYSLTGPLV-AATLGIPWIEQSIRLASPELIK---- 161 (398)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHH-HHHHTCCEEEECCSSCCCHHHH----
T ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECccccHHHHH-HHhhCCCEEEeccCCCCchhhh----
Confidence 00000011 11122233333455678888999999999999877777788 9999999998754321100000
Q ss_pred cccCCcccccCCCCCCCCCCccCCCChhhhhhhhhhhhcCCCCchhhhhcccccCCccEEEEcCccccccchHHHHHhhC
Q 037721 157 RKLNNSLADLMKSPDGFPATSITSLDEFVARDYLYVYTKFNGGPSVYERGIQGVDGCDVLAIKTCNEMEGPYLDFVRTQF 236 (465)
Q Consensus 157 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~ 236 (465)
......+......+ ++. .....+..+....+.++... ...
T Consensus 162 --------------------------~~~~~~l~~~~~~~--~~~-------~~~~~~~~~~~~~~~~~~~~-----~~~ 201 (398)
T 4fzr_A 162 --------------------------SAGVGELAPELAEL--GLT-------DFPDPLLSIDVCPPSMEAQP-----KPG 201 (398)
T ss_dssp --------------------------HHHHHHTHHHHHTT--TCS-------SCCCCSEEEECSCGGGC---------CC
T ss_pred --------------------------HHHHHHHHHHHHHc--CCC-------CCCCCCeEEEeCChhhCCCC-----CCC
Confidence 00000000001111 000 11223445554444444311 001
Q ss_pred CCCeEeeccCCCCCCCCCcchhhhccccCCCCCCeEEEEEeCCcccC--------CHHHHHHHHHHHHhcCCCeEEEEcC
Q 037721 237 KKPVLLTGPLVNPEPPSGELEERWAKWLCKYPPKSVIYCSFGSETFL--------TVDQIKELAIGLEITGLPFFLVLNF 308 (465)
Q Consensus 237 ~~~~~~vGp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~--------~~~~~~~i~~al~~~~~~~i~~~~~ 308 (465)
...+.++++. ....++.+|+...+++++|||++||.... ..+.+..++++++..+++++|+.+.
T Consensus 202 ~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~v~~~~~ 273 (398)
T 4fzr_A 202 TTKMRYVPYN--------GRNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGFEVVVAVSD 273 (398)
T ss_dssp CEECCCCCCC--------CSSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGGGTCEEEECCCC
T ss_pred CCCeeeeCCC--------CCCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 1112222211 01223445665545677999999998643 3356888999998889999998876
Q ss_pred CCCCCCcccccccCChhhhhhcCCCceEEecccchHhhhccccceeecccCChhhHHHHHHhCCceeeccccccchhhHH
Q 037721 309 PPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRHESVGCYVCHSGFSSVTEAVISDCQLVLLPLKGDQFLNSK 388 (465)
Q Consensus 309 ~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~~~~~~~ItHgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~ 388 (465)
.... ....+| .|+.+.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|...||..|+.
T Consensus 274 ~~~~-----~l~~~~---------~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~ 337 (398)
T 4fzr_A 274 KLAQ-----TLQPLP---------EGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSAR 337 (398)
T ss_dssp -------------CC---------TTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSGGGHHHHH
T ss_pred cchh-----hhccCC---------CcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecCCchhHHHHHH
Confidence 4211 112233 48999999999999999988 9999999999999999999999999999999999
Q ss_pred HHhhhhcceEEeeecCCCCccCHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHHHcCCchHHHHHHH
Q 037721 389 LVAGDLKAGVEVNRRDHDGHFGKEDIFKAVKTVMVDVNKEPGASIRANQKWWREFLLNGQIQDKFIADF 457 (465)
Q Consensus 389 ~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~ 457 (465)
++++. |+|+.++..+ +++++|.++|.++|+ |+++++++++.++.+.+..+..+.++.+
T Consensus 338 ~~~~~-g~g~~~~~~~----~~~~~l~~ai~~ll~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l 395 (398)
T 4fzr_A 338 LLHAA-GAGVEVPWEQ----AGVESVLAACARIRD------DSSYVGNARRLAAEMATLPTPADIVRLI 395 (398)
T ss_dssp HHHHT-TSEEECC-----------CHHHHHHHHHH------CTHHHHHHHHHHHHHTTSCCHHHHHHHH
T ss_pred HHHHc-CCEEecCccc----CCHHHHHHHHHHHHh------CHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 99999 9999998763 799999999999999 8999999999999999888777666654
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=5.1e-35 Score=291.14 Aligned_cols=357 Identities=14% Similarity=0.127 Sum_probs=247.7
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhcccCCCCCeeEEEccCCCCCCCCCCC--------
Q 037721 9 DQLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSSLNLTPMADIIPLQIPHVDGLPPGL-------- 80 (465)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~-------- 80 (465)
+.+||+|++.++.||++|++.|+++|.++||+|++++. ...+.+...| +.+..++... .+....
T Consensus 19 ~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~~G-----~~~~~~~~~~--~~~~~~~~~~~~~~ 90 (398)
T 3oti_A 19 RHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAAAG-----LEVVDVAPDY--SAVKVFEQVAKDNP 90 (398)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHTTT-----CEEEESSTTC--CHHHHHHHHHHHCH
T ss_pred hcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHhCC-----CeeEecCCcc--CHHHHhhhcccCCc
Confidence 35899999999999999999999999999999999999 8888888888 9999987210 000000
Q ss_pred --------CCCCCCchHHHHHHHHHHHhhHHHHHHHHhhcCCcEEEEcCCCcccccccccccCCeeEEEecchHHHHHHH
Q 037721 81 --------DSTSEMTPHMAELLKQALDLMQPQIKTLLSQLKPHFVFFDFTHYWLPGLVGSQLGIKTVNFSVFSAISQAYL 152 (465)
Q Consensus 81 --------~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~vi~D~~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~ 152 (465)
.. ..........+..........+.+++++++||+||+|...+++..+ |+.+|||++.........
T Consensus 91 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVv~d~~~~~~~~a-A~~~giP~v~~~~~~~~~---- 164 (398)
T 3oti_A 91 RFAETVATRP-AIDLEEWGVQIAAVNRPLVDGTMALVDDYRPDLVVYEQGATVGLLA-ADRAGVPAVQRNQSAWRT---- 164 (398)
T ss_dssp HHHHTGGGSC-CCSGGGGHHHHHHHHGGGHHHHHHHHHHHCCSEEEEETTCHHHHHH-HHHHTCCEEEECCTTCCC----
T ss_pred cccccccCCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECchhhHHHHH-HHHcCCCEEEEeccCCCc----
Confidence 00 0111122233344445567888999999999999999877777788 999999999764321000
Q ss_pred hccccccCCcccccCCCCCCCCCCccCCCChhhhhhhhhhhhcCCCCchhhhhcccccCCccEEEEcCccccccchHHHH
Q 037721 153 VVPARKLNNSLADLMKSPDGFPATSITSLDEFVARDYLYVYTKFNGGPSVYERGIQGVDGCDVLAIKTCNEMEGPYLDFV 232 (465)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~ 232 (465)
.. + ........ .....++.......+..+....+.+..+.
T Consensus 165 ---------------------~~-----~-~~~~~~~l---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 204 (398)
T 3oti_A 165 ---------------------RG-----M-HRSIASFL---------TDLMDKHQVSLPEPVATIESFPPSLLLEA---- 204 (398)
T ss_dssp ---------------------TT-----H-HHHHHTTC---------HHHHHHTTCCCCCCSEEECSSCGGGGTTS----
T ss_pred ---------------------cc-----h-hhHHHHHH---------HHHHHHcCCCCCCCCeEEEeCCHHHCCCC----
Confidence 00 0 00000000 00011111111223444433333333210
Q ss_pred HhhCCCCeEeeccCCCCCCCCCcchhhhccccCCCCCCeEEEEEeCCcccC--CHHHHHHHHHHHHhcCCCeEEEEcCCC
Q 037721 233 RTQFKKPVLLTGPLVNPEPPSGELEERWAKWLCKYPPKSVIYCSFGSETFL--TVDQIKELAIGLEITGLPFFLVLNFPP 310 (465)
Q Consensus 233 ~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~--~~~~~~~i~~al~~~~~~~i~~~~~~~ 310 (465)
......+.++ +. ..+....+|+...+++++|||++||.... ..+.+..++++++..+++++|+++...
T Consensus 205 -~~~~~~~~~~-----~~----~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~ 274 (398)
T 3oti_A 205 -EPEGWFMRWV-----PY----GGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLD 274 (398)
T ss_dssp -CCCSBCCCCC-----CC----CCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSC
T ss_pred -CCCCCCcccc-----CC----CCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcC
Confidence 0000011111 10 11233455776666678999999998653 567788899999988999999987752
Q ss_pred CCCCcccccccCChhhhhhcCCCceEEecccchHhhhccccceeecccCChhhHHHHHHhCCceeeccccccchhhH--H
Q 037721 311 NVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRHESVGCYVCHSGFSSVTEAVISDCQLVLLPLKGDQFLNS--K 388 (465)
Q Consensus 311 ~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~~~~~~~ItHgG~~s~~Eal~~GvP~l~~P~~~DQ~~na--~ 388 (465)
.. ....+| .|+.+.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|...||..|| .
T Consensus 275 ~~-----~l~~~~---------~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~ 338 (398)
T 3oti_A 275 IS-----PLGTLP---------RNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTARE 338 (398)
T ss_dssp CG-----GGCSCC---------TTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHH
T ss_pred hh-----hhccCC---------CcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHH
Confidence 11 112233 38999999999999999988 999999999999999999999999999999999 9
Q ss_pred HHhhhhcceEEeeecCCCCccCHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHHHcCCchHHHHHHHHHH
Q 037721 389 LVAGDLKAGVEVNRRDHDGHFGKEDIFKAVKTVMVDVNKEPGASIRANQKWWREFLLNGQIQDKFIADFVKD 460 (465)
Q Consensus 389 ~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~ 460 (465)
++++. |+|+.++..+ .+++.|. ++++ |++++++++++++.+.+.++..+.++.+.+.
T Consensus 339 ~~~~~-g~g~~~~~~~----~~~~~l~----~ll~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 395 (398)
T 3oti_A 339 AVSRR-GIGLVSTSDK----VDADLLR----RLIG------DESLRTAAREVREEMVALPTPAETVRRIVER 395 (398)
T ss_dssp HHHHH-TSEEECCGGG----CCHHHHH----HHHH------CHHHHHHHHHHHHHHHTSCCHHHHHHHHHHH
T ss_pred HHHHC-CCEEeeCCCC----CCHHHHH----HHHc------CHHHHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 99998 9999998763 7888777 7888 8999999999999999988888777766554
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=5.6e-35 Score=290.03 Aligned_cols=367 Identities=14% Similarity=0.116 Sum_probs=246.7
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhcccCCCCCeeEEEc-cCCC-CC-C----CCCCCCC
Q 037721 10 QLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSSLNLTPMADIIPL-QIPH-VD-G----LPPGLDS 82 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~~g~~~~~~~~~~l-~~~~-~~-~----~~~~~~~ 82 (465)
++||+|++.++.||++|++.|+++|+++||+|++++.+...+.+...| +.+..+ +.+. .. . .+.....
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~g-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGAG-----LTTAGIRGNDRTGDTGGTTQLRFPNPA 75 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHBT-----CEEEEC--------------CCSCCGG
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhCC-----CceeeecCCccchhhhhhhcccccccc
Confidence 369999999999999999999999999999999999987777787777 888888 3110 00 0 0000000
Q ss_pred CC-CCchHHHHHHHHHHHhh-------HHHHHHHHhhcCCcEEEEcCCCcccccccccccCCeeEEEecchHHHHHHHhc
Q 037721 83 TS-EMTPHMAELLKQALDLM-------QPQIKTLLSQLKPHFVFFDFTHYWLPGLVGSQLGIKTVNFSVFSAISQAYLVV 154 (465)
Q Consensus 83 ~~-~~~~~~~~~~~~~~~~~-------~~~l~~~l~~~~pD~vi~D~~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~ 154 (465)
.. .........+....... ...+.+++++++||+||+|...+++..+ |+.+|||++.+.......
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PD~Vv~~~~~~~~~~a-a~~~giP~v~~~~~~~~~------ 148 (391)
T 3tsa_A 76 FGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAWRPSVLLVDVCALIGRVL-GGLLDLPVVLHRWGVDPT------ 148 (391)
T ss_dssp GGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHH-HHHTTCCEEEECCSCCCT------
T ss_pred cccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhcCCCEEEeCcchhHHHHH-HHHhCCCEEEEecCCccc------
Confidence 00 00012222222222233 6778899999999999999866667778 999999999875322100
Q ss_pred cccccCCcccccCCCCCCCCCCccCCCChhhhhhhhhhhhcCCCCchhhhhcccccCCccEEEEcCccccccchHHHHHh
Q 037721 155 PARKLNNSLADLMKSPDGFPATSITSLDEFVARDYLYVYTKFNGGPSVYERGIQGVDGCDVLAIKTCNEMEGPYLDFVRT 234 (465)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~ 234 (465)
.. . +.......+......+. + ......+..+..+.++++... .
T Consensus 149 -------------------~~-~---~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~~~~~~~~~~~~~-----~ 191 (391)
T 3tsa_A 149 -------------------AG-P---FSDRAHELLDPVCRHHG--L-------TGLPTPELILDPCPPSLQASD-----A 191 (391)
T ss_dssp -------------------TT-H---HHHHHHHHHHHHHHHTT--S-------SSSCCCSEEEECSCGGGSCTT-----S
T ss_pred -------------------cc-c---ccchHHHHHHHHHHHcC--C-------CCCCCCceEEEecChhhcCCC-----C
Confidence 00 0 00000001111111110 0 001123555555544444311 0
Q ss_pred hCCCCeEeeccCCCCCCCCCcchhhhccccCCCCCCeEEEEEeCCccc--CC-HHHHHHHHHHHHhc-CCCeEEEEcCCC
Q 037721 235 QFKKPVLLTGPLVNPEPPSGELEERWAKWLCKYPPKSVIYCSFGSETF--LT-VDQIKELAIGLEIT-GLPFFLVLNFPP 310 (465)
Q Consensus 235 ~~~~~~~~vGp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~--~~-~~~~~~i~~al~~~-~~~~i~~~~~~~ 310 (465)
.....+.++ |. ..+.....|+...+++++|||++||... .. .+.+..++++ +.. +++++|..+...
T Consensus 192 ~~~~~~~~~-p~--------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~ 261 (391)
T 3tsa_A 192 PQGAPVQYV-PY--------NGSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPEH 261 (391)
T ss_dssp CCCEECCCC-CC--------CCCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGGG
T ss_pred CccCCeeee-cC--------CCCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCcc
Confidence 011112222 11 0122344577655667899999999853 33 6778888888 776 788888876531
Q ss_pred CCCCcccccccCChhhhhhcCCCceEEecccchHhhhccccceeecccCChhhHHHHHHhCCceeeccccccchhhHHHH
Q 037721 311 NVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRHESVGCYVCHSGFSSVTEAVISDCQLVLLPLKGDQFLNSKLV 390 (465)
Q Consensus 311 ~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~~~~~~~ItHgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~v 390 (465)
...+.. ...|+.+.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|...||..|+.++
T Consensus 262 --------~~~l~~------~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~ 325 (391)
T 3tsa_A 262 --------RALLTD------LPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNL 325 (391)
T ss_dssp --------GGGCTT------CCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHH
T ss_pred --------hhhccc------CCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecCCcccHHHHHHHH
Confidence 111111 2348999999999999988888 999999999999999999999999999999999999
Q ss_pred hhhhcceEEeee--cCCCCccCHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Q 037721 391 AGDLKAGVEVNR--RDHDGHFGKEDIFKAVKTVMVDVNKEPGASIRANQKWWREFLLNGQIQDKFIADFVKDLK 462 (465)
Q Consensus 391 ~~~~G~G~~l~~--~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~l~ 462 (465)
++. |+|+.+.. .+ .+++.|.++|.++|+ |++++++++++++.+.+.++..+.++.+.+.+.
T Consensus 326 ~~~-g~g~~~~~~~~~----~~~~~l~~ai~~ll~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 388 (391)
T 3tsa_A 326 AAA-GAGICLPDEQAQ----SDHEQFTDSIATVLG------DTGFAAAAIKLSDEITAMPHPAALVRTLENTAA 388 (391)
T ss_dssp HHT-TSEEECCSHHHH----TCHHHHHHHHHHHHT------CTHHHHHHHHHHHHHHTSCCHHHHHHHHHHC--
T ss_pred HHc-CCEEecCccccc----CCHHHHHHHHHHHHc------CHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHh
Confidence 999 99999987 53 799999999999999 899999999999999998888887777765443
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=1.3e-32 Score=274.87 Aligned_cols=379 Identities=16% Similarity=0.193 Sum_probs=256.3
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhcccCCCCCeeEEEccCCCCCC--------CCCC
Q 037721 8 ADQLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSSLNLTPMADIIPLQIPHVDG--------LPPG 79 (465)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~~g~~~~~~~~~~l~~~~~~~--------~~~~ 79 (465)
..++||+|++.++.||++|++.|+++|+++||+|++++.+...+.+...| +++..++.....+ +...
T Consensus 18 ~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~g-----~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (412)
T 3otg_A 18 GRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKLG-----FEPVATGMPVFDGFLAALRIRFDTD 92 (412)
T ss_dssp CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHTT-----CEEEECCCCHHHHHHHHHHHHHSCS
T ss_pred cceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHhcC-----CceeecCcccccchhhhhhhhhccc
Confidence 45789999999999999999999999999999999999987777777777 8998886200000 0000
Q ss_pred CCCCCCCc---hHHHHHHHHH-HHhhHHHHHHHHhhcCCcEEEEcCCCcccccccccccCCeeEEEecchHHHHHHHhcc
Q 037721 80 LDSTSEMT---PHMAELLKQA-LDLMQPQIKTLLSQLKPHFVFFDFTHYWLPGLVGSQLGIKTVNFSVFSAISQAYLVVP 155 (465)
Q Consensus 80 ~~~~~~~~---~~~~~~~~~~-~~~~~~~l~~~l~~~~pD~vi~D~~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~ 155 (465)
........ ......+... .......+.+++++++||+||+|...+++..+ |+.+|||+|.........
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvVv~~~~~~~~~~a-a~~~giP~v~~~~~~~~~------- 164 (412)
T 3otg_A 93 SPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEISNYGAGLA-ALKAGIPTICHGVGRDTP------- 164 (412)
T ss_dssp CCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHH-HHHHTCCEEEECCSCCCC-------
T ss_pred CCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhcCCCEEEECchhhHHHHH-HHHcCCCEEEecccccCc-------
Confidence 00000000 0111222222 22345778889999999999999766666777 999999998864321100
Q ss_pred ccccCCcccccCCCCCCCCCCccCCCChhhhhhhhhhhhcCCCCchhhhhcccccCCccEEEEcCccccccchHHHHHhh
Q 037721 156 ARKLNNSLADLMKSPDGFPATSITSLDEFVARDYLYVYTKFNGGPSVYERGIQGVDGCDVLAIKTCNEMEGPYLDFVRTQ 235 (465)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~ 235 (465)
+. ........+......+ ++....+ .....++.++..+.++++.. ...
T Consensus 165 ------------------~~-----~~~~~~~~~~~~~~~~--g~~~~~~--~~~~~~d~~i~~~~~~~~~~-----~~~ 212 (412)
T 3otg_A 165 ------------------DD-----LTRSIEEEVRGLAQRL--GLDLPPG--RIDGFGNPFIDIFPPSLQEP-----EFR 212 (412)
T ss_dssp ------------------SH-----HHHHHHHHHHHHHHHT--TCCCCSS--CCGGGGCCEEECSCGGGSCH-----HHH
T ss_pred ------------------hh-----hhHHHHHHHHHHHHHc--CCCCCcc--cccCCCCeEEeeCCHHhcCC-----ccc
Confidence 00 0000000111111111 1100000 01234566666665555532 111
Q ss_pred CCCCeEeeccCCCCCCCCCcchhhhccc-cCCCCCCeEEEEEeCCcccCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCC
Q 037721 236 FKKPVLLTGPLVNPEPPSGELEERWAKW-LCKYPPKSVIYCSFGSETFLTVDQIKELAIGLEITGLPFFLVLNFPPNVDG 314 (465)
Q Consensus 236 ~~~~~~~vGp~~~~~~~~~~~~~~~~~~-l~~~~~~~~v~vs~GS~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~ 314 (465)
.......+-+. +.. ...+..+| ....+++++||+++||......+.+..++++++..+.+++|.++.....+
T Consensus 213 ~~~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~- 285 (412)
T 3otg_A 213 ARPRRHELRPV----PFA--EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGLAGLDADVLVASGPSLDVS- 285 (412)
T ss_dssp TCTTEEECCCC----CCC--CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHHHHTSSSEEEEECCSSCCCT-
T ss_pred CCCCcceeecc----CCC--CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHHHHcCCCEEEEEECCCCChh-
Confidence 11111111111 110 12233445 23234577999999999766678899999999988999999988763211
Q ss_pred cccccccCChhhhhhcCCCceEEecccchHhhhccccceeecccCChhhHHHHHHhCCceeeccccccchhhHHHHhhhh
Q 037721 315 QSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRHESVGCYVCHSGFSSVTEAVISDCQLVLLPLKGDQFLNSKLVAGDL 394 (465)
Q Consensus 315 ~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~~~~~~~ItHgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~ 394 (465)
....++ .|+.+.+|+|+.++|+++++ ||||||+||++||+++|+|+|++|...||..|+..+++.
T Consensus 286 ---~l~~~~---------~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~- 350 (412)
T 3otg_A 286 ---GLGEVP---------ANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQA- 350 (412)
T ss_dssp ---TCCCCC---------TTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH-
T ss_pred ---hhccCC---------CcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCEEecCCchhHHHHHHHHHHc-
Confidence 112233 38999999999999999998 999999999999999999999999999999999999999
Q ss_pred cceEEeeecCCCCccCHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHh
Q 037721 395 KAGVEVNRRDHDGHFGKEDIFKAVKTVMVDVNKEPGASIRANQKWWREFLLNGQIQDKFIADFVKDLKA 463 (465)
Q Consensus 395 G~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~l~~ 463 (465)
|+|+.++..+ +++++|.++|.++++ |+++++++.+.++.+.+..+.++.++.+.+.+.+
T Consensus 351 g~g~~~~~~~----~~~~~l~~ai~~ll~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 409 (412)
T 3otg_A 351 GAGDHLLPDN----ISPDSVSGAAKRLLA------EESYRAGARAVAAEIAAMPGPDEVVRLLPGFASR 409 (412)
T ss_dssp TSEEECCGGG----CCHHHHHHHHHHHHH------CHHHHHHHHHHHHHHHHSCCHHHHHTTHHHHHC-
T ss_pred CCEEecCccc----CCHHHHHHHHHHHHh------CHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcc
Confidence 9999998763 799999999999999 8999999999999999888888777777665543
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.97 E-value=7e-29 Score=243.43 Aligned_cols=337 Identities=14% Similarity=0.071 Sum_probs=206.5
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCCh--hhhhcccCCCCCeeEEEccCCCCCCCCCCCCCCCCCch
Q 037721 11 LHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNI--PRIKSSLNLTPMADIIPLQIPHVDGLPPGLDSTSEMTP 88 (465)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~--~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 88 (465)
.||+|...|+.||++|.++||++|+++||+|+|+++.... +.+++.| +++..++. .++... .......
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~g-----~~~~~i~~---~~~~~~--~~~~~~~ 72 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKAG-----LPLHLIQV---SGLRGK--GLKSLVK 72 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGGT-----CCEEECC-------------------
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhcC-----CcEEEEEC---CCcCCC--CHHHHHH
Confidence 4899999988999999999999999999999999987653 3467777 88888872 222111 0000111
Q ss_pred HHHHHHHHHHHhhHHHHHHHHhhcCCcEEEEcCCCcc--cccccccccCCeeEEEecchHHHHHHHhccccccCCccccc
Q 037721 89 HMAELLKQALDLMQPQIKTLLSQLKPHFVFFDFTHYW--LPGLVGSQLGIKTVNFSVFSAISQAYLVVPARKLNNSLADL 166 (465)
Q Consensus 89 ~~~~~~~~~~~~~~~~l~~~l~~~~pD~vi~D~~~~~--~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (465)
..++.+. ......+++++++||+||++....+ +..+ |+.+|||+++.-.
T Consensus 73 ~~~~~~~-----~~~~~~~~l~~~~PDvVi~~g~~~s~p~~la-A~~~~iP~vihe~----------------------- 123 (365)
T 3s2u_A 73 APLELLK-----SLFQALRVIRQLRPVCVLGLGGYVTGPGGLA-ARLNGVPLVIHEQ----------------------- 123 (365)
T ss_dssp CHHHHHH-----HHHHHHHHHHHHCCSEEEECSSSTHHHHHHH-HHHTTCCEEEEEC-----------------------
T ss_pred HHHHHHH-----HHHHHHHHHHhcCCCEEEEcCCcchHHHHHH-HHHcCCCEEEEec-----------------------
Confidence 1111111 1234567889999999999864333 3456 8999999986311
Q ss_pred CCCCCCCCCCccCCCChhhhhhhhhhhhcCCCCchhhhhcccccCCccEEEEcCccccccchHHHHHhhCCCCeEeeccC
Q 037721 167 MKSPDGFPATSITSLDEFVARDYLYVYTKFNGGPSVYERGIQGVDGCDVLAIKTCNEMEGPYLDFVRTQFKKPVLLTGPL 246 (465)
Q Consensus 167 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~~~~~~vGp~ 246 (465)
+..|+ .. ..+. . +.++.++ .++++..+ ...+..++|..
T Consensus 124 ----n~~~G-----~~----nr~l-------------~------~~a~~v~-~~~~~~~~---------~~~k~~~~g~p 161 (365)
T 3s2u_A 124 ----NAVAG-----TA----NRSL-------------A------PIARRVC-EAFPDTFP---------ASDKRLTTGNP 161 (365)
T ss_dssp ----SSSCC-----HH----HHHH-------------G------GGCSEEE-ESSTTSSC---------C---CEECCCC
T ss_pred ----chhhh-----hH----HHhh-------------c------cccceee-eccccccc---------CcCcEEEECCC
Confidence 12232 10 1110 0 1122222 23322111 12346667744
Q ss_pred CCCCCCCCcchhhhccccCCCCCCeEEEEEeCCcccCCHHHHHHHHHHHHhc----CCCeEEEEcCCCCCCCcccccccC
Q 037721 247 VNPEPPSGELEERWAKWLCKYPPKSVIYCSFGSETFLTVDQIKELAIGLEIT----GLPFFLVLNFPPNVDGQSELVRTL 322 (465)
Q Consensus 247 ~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~i~~al~~~----~~~~i~~~~~~~~~~~~~~~~~~l 322 (465)
.... ...+...+....++++.|+|..||.+.... .+.+.++++.. +..++|.++... .+.+
T Consensus 162 -vr~~----~~~~~~~~~~~~~~~~~ilv~gGs~g~~~~--~~~~~~al~~l~~~~~~~vi~~~G~~~--------~~~~ 226 (365)
T 3s2u_A 162 -VRGE----LFLDAHARAPLTGRRVNLLVLGGSLGAEPL--NKLLPEALAQVPLEIRPAIRHQAGRQH--------AEIT 226 (365)
T ss_dssp -CCGG----GCCCTTSSCCCTTSCCEEEECCTTTTCSHH--HHHHHHHHHTSCTTTCCEEEEECCTTT--------HHHH
T ss_pred -Cchh----hccchhhhcccCCCCcEEEEECCcCCcccc--chhhHHHHHhcccccceEEEEecCccc--------cccc
Confidence 2211 111111122223446689999999775332 22345555533 345667666531 1111
Q ss_pred ChhhhhhcCCCceEEecccchH-hhhccccceeecccCChhhHHHHHHhCCceeeccc----cccchhhHHHHhhhhcce
Q 037721 323 PPGFMDRVKDRGVVHTGWVQQQ-LILRHESVGCYVCHSGFSSVTEAVISDCQLVLLPL----KGDQFLNSKLVAGDLKAG 397 (465)
Q Consensus 323 p~~~~~~~~~~nv~~~~~~pq~-~vL~~~~~~~~ItHgG~~s~~Eal~~GvP~l~~P~----~~DQ~~na~~v~~~~G~G 397 (465)
.+.+. ..+.++.+..|++++ ++|+.+|+ +|||+|.+|+.|++++|+|+|.+|+ ..+|..||+.+++. |+|
T Consensus 227 ~~~~~--~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~-G~a 301 (365)
T 3s2u_A 227 AERYR--TVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRS-GAG 301 (365)
T ss_dssp HHHHH--HTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTT-TSE
T ss_pred cceec--ccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHC-CCE
Confidence 11111 123477888999975 69999999 9999999999999999999999997 35899999999999 999
Q ss_pred EEeeecCCCCccCHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHHHcCCchHHHHHHHH
Q 037721 398 VEVNRRDHDGHFGKEDIFKAVKTVMVDVNKEPGASIRANQKWWREFLLNGQIQDKFIADFV 458 (465)
Q Consensus 398 ~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~ 458 (465)
+.++..+ ++++.|.++|.++++ |++.++++.+-++++....++++.++.++
T Consensus 302 ~~l~~~~----~~~~~L~~~i~~ll~------d~~~~~~m~~~a~~~~~~~aa~~ia~~i~ 352 (365)
T 3s2u_A 302 RLLPQKS----TGAAELAAQLSEVLM------HPETLRSMADQARSLAKPEATRTVVDACL 352 (365)
T ss_dssp EECCTTT----CCHHHHHHHHHHHHH------CTHHHHHHHHHHHHTCCTTHHHHHHHHHH
T ss_pred EEeecCC----CCHHHHHHHHHHHHC------CHHHHHHHHHHHHhcCCccHHHHHHHHHH
Confidence 9998764 899999999999999 66665555444444433333333344443
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.95 E-value=1.5e-27 Score=208.15 Aligned_cols=164 Identities=20% Similarity=0.240 Sum_probs=138.8
Q ss_pred cchhhhccccCCCCCCeEEEEEeCCccc-CCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhhhhhcCCC
Q 037721 255 ELEERWAKWLCKYPPKSVIYCSFGSETF-LTVDQIKELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVKDR 333 (465)
Q Consensus 255 ~~~~~~~~~l~~~~~~~~v~vs~GS~~~-~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~ 333 (465)
+++.++.+|++..+++++|||++||... ...+.+..++++++..+++++|+++... ...+++
T Consensus 6 ~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~--------~~~~~~--------- 68 (170)
T 2o6l_A 6 PLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK--------PDTLGL--------- 68 (170)
T ss_dssp CCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC--------CTTCCT---------
T ss_pred CCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC--------cccCCC---------
Confidence 4778899999876667899999999863 4667888999999888899999987641 122333
Q ss_pred ceEEecccchHhhhccccceeecccCChhhHHHHHHhCCceeeccccccchhhHHHHhhhhcceEEeeecCCCCccCHHH
Q 037721 334 GVVHTGWVQQQLILRHESVGCYVCHSGFSSVTEAVISDCQLVLLPLKGDQFLNSKLVAGDLKAGVEVNRRDHDGHFGKED 413 (465)
Q Consensus 334 nv~~~~~~pq~~vL~~~~~~~~ItHgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~ 413 (465)
|+.+.+|+||.++|.|+.+++||||||+||++||+++|+|+|++|...||..||+++++. |+|+.++.. .++.++
T Consensus 69 ~v~~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~-g~g~~~~~~----~~~~~~ 143 (170)
T 2o6l_A 69 NTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKAR-GAAVRVDFN----TMSSTD 143 (170)
T ss_dssp TEEEESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTT-TSEEECCTT----TCCHHH
T ss_pred cEEEecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHc-CCeEEeccc----cCCHHH
Confidence 899999999999996666666999999999999999999999999999999999999998 999999865 389999
Q ss_pred HHHHHHHhhcccCCcchHHHHHHHHHHHHHHHc
Q 037721 414 IFKAVKTVMVDVNKEPGASIRANQKWWREFLLN 446 (465)
Q Consensus 414 l~~ai~~ll~~~~~~~~~~~~~~a~~l~~~~~~ 446 (465)
|.++|.++++ +++|+++++++++.+++
T Consensus 144 l~~~i~~ll~------~~~~~~~a~~~~~~~~~ 170 (170)
T 2o6l_A 144 LLNALKRVIN------DPSYKENVMKLSRIQHD 170 (170)
T ss_dssp HHHHHHHHHH------CHHHHHHHHHHC-----
T ss_pred HHHHHHHHHc------CHHHHHHHHHHHHHhhC
Confidence 9999999999 89999999999998763
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.85 E-value=2.8e-19 Score=175.02 Aligned_cols=337 Identities=11% Similarity=0.036 Sum_probs=206.0
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCCh--hhhhcccCCCCCeeEEEccCCCCCCCCCCCCCCCCCch
Q 037721 11 LHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNI--PRIKSSLNLTPMADIIPLQIPHVDGLPPGLDSTSEMTP 88 (465)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~--~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 88 (465)
+||++++.+..||..+++.|+++|.++||+|++++..... ..+...| +++..++.+ .+... ...
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~g-----~~~~~~~~~---~~~~~------~~~ 72 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHG-----IEIDFIRIS---GLRGK------GIK 72 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGGT-----CEEEECCCC---CCTTC------CHH
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccccC-----CceEEecCC---ccCcC------ccH
Confidence 6999999887899999999999999999999999987642 2344445 888777621 11110 001
Q ss_pred HHHHHHHHHHHhhHHHHHHHHhhcCCcEEEEcCCC--cccccccccccCCeeEEEecchHHHHHHHhccccccCCccccc
Q 037721 89 HMAELLKQALDLMQPQIKTLLSQLKPHFVFFDFTH--YWLPGLVGSQLGIKTVNFSVFSAISQAYLVVPARKLNNSLADL 166 (465)
Q Consensus 89 ~~~~~~~~~~~~~~~~l~~~l~~~~pD~vi~D~~~--~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (465)
..+...... ......+.+++++.+||+|+++... ..+..+ ++.+|+|+|.....
T Consensus 73 ~~~~~~~~~-~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~-~~~~~~p~v~~~~~---------------------- 128 (364)
T 1f0k_A 73 ALIAAPLRI-FNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLA-AWSLGIPVVLHEQN---------------------- 128 (364)
T ss_dssp HHHTCHHHH-HHHHHHHHHHHHHHCCSEEEECSSTTHHHHHHH-HHHTTCCEEEEECS----------------------
T ss_pred HHHHHHHHH-HHHHHHHHHHHHhcCCCEEEEeCCcCchHHHHH-HHHcCCCEEEEecC----------------------
Confidence 111000111 1123567788888999999998632 223456 88889999864221
Q ss_pred CCCCCCCCCCccCCCChhhhhhhhhhhhcCCCCchhhhhcccccCCccEEEEcCccccccchHHHHHhhCCCCeEeeccC
Q 037721 167 MKSPDGFPATSITSLDEFVARDYLYVYTKFNGGPSVYERGIQGVDGCDVLAIKTCNEMEGPYLDFVRTQFKKPVLLTGPL 246 (465)
Q Consensus 167 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~~~~~~vGp~ 246 (465)
.+++ . ...+ ..+.++.++..+.. . ++ ++..+|.-
T Consensus 129 -----~~~~-----~----~~~~-------------------~~~~~d~v~~~~~~-~-----------~~-~~~~i~n~ 162 (364)
T 1f0k_A 129 -----GIAG-----L----TNKW-------------------LAKIATKVMQAFPG-A-----------FP-NAEVVGNP 162 (364)
T ss_dssp -----SSCC-----H----HHHH-------------------HTTTCSEEEESSTT-S-----------SS-SCEECCCC
T ss_pred -----CCCc-----H----HHHH-------------------HHHhCCEEEecChh-h-----------cC-CceEeCCc
Confidence 0111 0 0000 01234455543321 1 22 35555532
Q ss_pred CCCCCCCCcchhhhccccCCCCCCeEEEEEeCCcccCCHHHHHHHHHHHHhc--CCCeEEEEcCCCCCCCcccccccCCh
Q 037721 247 VNPEPPSGELEERWAKWLCKYPPKSVIYCSFGSETFLTVDQIKELAIGLEIT--GLPFFLVLNFPPNVDGQSELVRTLPP 324 (465)
Q Consensus 247 ~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~i~~al~~~--~~~~i~~~~~~~~~~~~~~~~~~lp~ 324 (465)
..... ..+....+.+...+++++|+++.|+... ......++++++.. +.++++.+|.+. . +
T Consensus 163 -v~~~~--~~~~~~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~--------~----~ 225 (364)
T 1f0k_A 163 -VRTDV--LALPLPQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGS--------Q----Q 225 (364)
T ss_dssp -CCHHH--HTSCCHHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTC--------H----H
T ss_pred -cchhh--cccchhhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCch--------H----H
Confidence 11100 0000001112222335678888888653 33334455555533 566677776642 1 1
Q ss_pred hhhh---hcCCCceEEecccc-hHhhhccccceeecccCChhhHHHHHHhCCceeecccc---ccchhhHHHHhhhhcce
Q 037721 325 GFMD---RVKDRGVVHTGWVQ-QQLILRHESVGCYVCHSGFSSVTEAVISDCQLVLLPLK---GDQFLNSKLVAGDLKAG 397 (465)
Q Consensus 325 ~~~~---~~~~~nv~~~~~~p-q~~vL~~~~~~~~ItHgG~~s~~Eal~~GvP~l~~P~~---~DQ~~na~~v~~~~G~G 397 (465)
.+.+ +.+-.++.+.+|++ ..++++.+++ +|+++|.++++||+++|+|+|+.|.. .||..|+..+.+. |.|
T Consensus 226 ~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~-g~g 302 (364)
T 1f0k_A 226 SVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKA-GAA 302 (364)
T ss_dssp HHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHT-TSE
T ss_pred HHHHHHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhC-CcE
Confidence 2221 11224799999995 4679999999 99999999999999999999999987 7999999999998 999
Q ss_pred EEeeecCCCCccCHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHh
Q 037721 398 VEVNRRDHDGHFGKEDIFKAVKTVMVDVNKEPGASIRANQKWWREFLLNGQIQDKFIADFVKDLKA 463 (465)
Q Consensus 398 ~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~l~~ 463 (465)
..++..+ .+.+++.++|.++ + ++.++++.+-+....+..+.++.++.+.+.+++
T Consensus 303 ~~~~~~d----~~~~~la~~i~~l-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~ 356 (364)
T 1f0k_A 303 KIIEQPQ----LSVDAVANTLAGW-S-------RETLLTMAERARAASIPDATERVANEVSRVARA 356 (364)
T ss_dssp EECCGGG----CCHHHHHHHHHTC-C-------HHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHTT
T ss_pred EEecccc----CCHHHHHHHHHhc-C-------HHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHH
Confidence 9888753 6799999999988 6 344444444444444444555566666665543
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.69 E-value=1.6e-15 Score=141.40 Aligned_cols=263 Identities=16% Similarity=0.108 Sum_probs=164.5
Q ss_pred EEEEecC----CCccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhcccCCCCCeeEEEccCCCCCCCCCCCCCCCCCc
Q 037721 12 HVVMFPW----FAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSSLNLTPMADIIPLQIPHVDGLPPGLDSTSEMT 87 (465)
Q Consensus 12 ~il~~~~----~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 87 (465)
+|+|-+- -|.||+.+++.||++|+ +|+|++.......++..| +.+..++ . .+
T Consensus 2 ki~ir~Da~~~IG~GHvmRcl~LA~~l~----~v~F~~~~~~~~~~~~~g-----~~v~~l~----~---~d-------- 57 (282)
T 3hbm_A 2 KVLFRSDSSSQIGFGHIKRDLVLAKQYS----DVSFACLPLEGSLIDEIP-----YPVYELS----S---ES-------- 57 (282)
T ss_dssp CEEEEECCBTTTBSHHHHHHHHHHTTCS----SEEEEECCCTTCCGGGCC-----SCEEECS----S---SC--------
T ss_pred EEEEEEecCCCccccHHHHHHHHHHHHH----hCEEEEecCcHhHHHHCC-----CeEEEcC----c---cC--------
Confidence 4666433 38999999999999998 899999876555666555 6666664 1 00
Q ss_pred hHHHHHHHHHHHhhHHHHHHHHhhcCCcEEEEcCCCccccc--ccccc-cCCeeEEEecchHHHHHHHhccccccCCccc
Q 037721 88 PHMAELLKQALDLMQPQIKTLLSQLKPHFVFFDFTHYWLPG--LVGSQ-LGIKTVNFSVFSAISQAYLVVPARKLNNSLA 164 (465)
Q Consensus 88 ~~~~~~~~~~~~~~~~~l~~~l~~~~pD~vi~D~~~~~~~~--~~A~~-~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (465)
...+.+++++.++|+||.|.+...... . .+. .+++++.+--
T Consensus 58 --------------~~~~~~~l~~~~~d~lIvD~Y~~~~~~~~~-lk~~~~~~i~~iDD--------------------- 101 (282)
T 3hbm_A 58 --------------IYELINLIKEEKFELLIIDHYGISVDDEKL-IKLETGVKILSFDD--------------------- 101 (282)
T ss_dssp --------------HHHHHHHHHHHTCSEEEEECTTCCHHHHHH-HHHHHCCEEEEECS---------------------
T ss_pred --------------HHHHHHHHHhCCCCEEEEECCCCCHHHHHH-HHHhcCcEEEEEec---------------------
Confidence 123456677779999999997655432 2 222 4777766411
Q ss_pred ccCCCCCCCCCCccCCCChhhhhhhhhhhhcCCCCchhhhhcccccCCccEEEEcCccccccchHHHHHhhCC-CCeEee
Q 037721 165 DLMKSPDGFPATSITSLDEFVARDYLYVYTKFNGGPSVYERGIQGVDGCDVLAIKTCNEMEGPYLDFVRTQFK-KPVLLT 243 (465)
Q Consensus 165 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~-~~~~~v 243 (465)
+.. ...+|.++-.+...-...| ....| ...++.
T Consensus 102 -~~~-----------------------------------------~~~~Dllin~~~~~~~~~Y----~~~~p~~~~~l~ 135 (282)
T 3hbm_A 102 -EIK-----------------------------------------PHHCDILLNVNAYAKASDY----EGLVPFKCEVRC 135 (282)
T ss_dssp -SCC-----------------------------------------CCCCSEEEECSTTCCGGGG----TTTCC-CCEEEE
T ss_pred -CCC-----------------------------------------cccCCEEEeCCcccchhhc----cccCCCCCeEee
Confidence 000 0123333322211100001 01112 234567
Q ss_pred ccCCCCCCCCCcchhhhccccC-CCCCCeEEEEEeCCcccCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCcccccccC
Q 037721 244 GPLVNPEPPSGELEERWAKWLC-KYPPKSVIYCSFGSETFLTVDQIKELAIGLEITGLPFFLVLNFPPNVDGQSELVRTL 322 (465)
Q Consensus 244 Gp~~~~~~~~~~~~~~~~~~l~-~~~~~~~v~vs~GS~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~l 322 (465)
||--.+ +.+++.+.-. ..++.+.|+|++|+.... .....+++++.... ++.++++.+.. .
T Consensus 136 G~~Y~~------lR~eF~~~~~~~r~~~~~ILv~~GG~d~~--~l~~~vl~~L~~~~-~i~vv~G~~~~----------~ 196 (282)
T 3hbm_A 136 GFSYAL------IREEFYQEAKENRKKKYDFFICMGGTDIK--NLSLQIASELPKTK-IISIATSSSNP----------N 196 (282)
T ss_dssp SGGGCC------CCHHHHHHTTCCCCCCEEEEEECCSCCTT--CHHHHHHHHSCTTS-CEEEEECTTCT----------T
T ss_pred CCcccc------cCHHHHHhhhhccccCCeEEEEECCCchh--hHHHHHHHHhhcCC-CEEEEECCCch----------H
Confidence 872011 2222221111 122356899999975433 35556777776543 67777776521 1
Q ss_pred Chhhhhhc-CCCceEEecccchH-hhhccccceeecccCChhhHHHHHHhCCceeeccccccchhhHHHHhhhhcceEEe
Q 037721 323 PPGFMDRV-KDRGVVHTGWVQQQ-LILRHESVGCYVCHSGFSSVTEAVISDCQLVLLPLKGDQFLNSKLVAGDLKAGVEV 400 (465)
Q Consensus 323 p~~~~~~~-~~~nv~~~~~~pq~-~vL~~~~~~~~ItHgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l 400 (465)
.+.+.... ...|+.+..|++++ ++|..+++ +||+|| +|++|+++.|+|+|.+|...+|..||+.+++. |+++.+
T Consensus 197 ~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~-G~~~~~ 272 (282)
T 3hbm_A 197 LKKLQKFAKLHNNIRLFIDHENIAKLMNESNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKK-GYEVEY 272 (282)
T ss_dssp HHHHHHHHHTCSSEEEEESCSCHHHHHHTEEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHT-TCEEEC
T ss_pred HHHHHHHHhhCCCEEEEeCHHHHHHHHHHCCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHC-CCEEEc
Confidence 12222211 23489999999876 59999999 999999 89999999999999999999999999999999 999988
Q ss_pred eec
Q 037721 401 NRR 403 (465)
Q Consensus 401 ~~~ 403 (465)
..-
T Consensus 273 ~~~ 275 (282)
T 3hbm_A 273 KYL 275 (282)
T ss_dssp GGG
T ss_pred chh
Confidence 764
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.60 E-value=1.9e-15 Score=135.23 Aligned_cols=140 Identities=10% Similarity=0.059 Sum_probs=96.3
Q ss_pred CCCeEEEEEeCCcccCCHHHHHHH-----HHHHHhcC-CCeEEEEcCCCCCCCccccccc---------CChhh------
Q 037721 268 PPKSVIYCSFGSETFLTVDQIKEL-----AIGLEITG-LPFFLVLNFPPNVDGQSELVRT---------LPPGF------ 326 (465)
Q Consensus 268 ~~~~~v~vs~GS~~~~~~~~~~~i-----~~al~~~~-~~~i~~~~~~~~~~~~~~~~~~---------lp~~~------ 326 (465)
+++++|||+.||... -.+.+..+ +++|...+ .++++.+|........ ..... +|.+-
T Consensus 26 ~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~~~-~~~~~~~~~~~~~l~p~~~~~~~~~ 103 (224)
T 2jzc_A 26 IEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEFE-HLVQERGGQRESQKIPIDQFGCGDT 103 (224)
T ss_dssp CCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCCCC-SHHHHHTCEECSCCCSSCTTCTTCS
T ss_pred CCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhhHH-HHHHhhhcccccccccccccccccc
Confidence 446799999999742 24444443 47887777 7899999876321000 00000 12100
Q ss_pred -hh---hcCCCceEEecccchH-hhhc-cccceeecccCChhhHHHHHHhCCceeecccc----ccchhhHHHHhhhhcc
Q 037721 327 -MD---RVKDRGVVHTGWVQQQ-LILR-HESVGCYVCHSGFSSVTEAVISDCQLVLLPLK----GDQFLNSKLVAGDLKA 396 (465)
Q Consensus 327 -~~---~~~~~nv~~~~~~pq~-~vL~-~~~~~~~ItHgG~~s~~Eal~~GvP~l~~P~~----~DQ~~na~~v~~~~G~ 396 (465)
.. .....++.+..|++++ ++|+ .+++ +|||||.||++|++++|+|+|++|.. .||..||+++++. |+
T Consensus 104 ~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~-G~ 180 (224)
T 2jzc_A 104 ARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVEL-GY 180 (224)
T ss_dssp CEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHH-SC
T ss_pred ccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHC-CC
Confidence 00 0012256677888876 7899 9999 99999999999999999999999973 4799999999999 99
Q ss_pred eEEeeecCCCCccCHHHHHHHHHHh
Q 037721 397 GVEVNRRDHDGHFGKEDIFKAVKTV 421 (465)
Q Consensus 397 G~~l~~~~~~~~~~~~~l~~ai~~l 421 (465)
|+.+ +.+.|.++|.++
T Consensus 181 ~~~~---------~~~~L~~~i~~l 196 (224)
T 2jzc_A 181 VWSC---------APTETGLIAGLR 196 (224)
T ss_dssp CCEE---------CSCTTTHHHHHH
T ss_pred EEEc---------CHHHHHHHHHHH
Confidence 9765 335566667665
No 25
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.34 E-value=9.8e-11 Score=114.62 Aligned_cols=86 Identities=14% Similarity=0.087 Sum_probs=66.2
Q ss_pred CceEEecccch---HhhhccccceeecccCChhhHHHHHHhCCceeeccccccchhhHHHHhhhhcceEEeeecCCCCcc
Q 037721 333 RGVVHTGWVQQ---QLILRHESVGCYVCHSGFSSVTEAVISDCQLVLLPLKGDQFLNSKLVAGDLKAGVEVNRRDHDGHF 409 (465)
Q Consensus 333 ~nv~~~~~~pq---~~vL~~~~~~~~ItHgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~ 409 (465)
.++.+.+++++ .++++.+++ ||+.+| |.+.||+++|+|+|+.+..+++.. +.+. |.|+.++ .
T Consensus 255 ~~v~~~g~~g~~~~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~~~-g~g~lv~-------~ 319 (376)
T 1v4v_A 255 RNFVLLDPLEYGSMAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GLKA-GILKLAG-------T 319 (376)
T ss_dssp TTEEEECCCCHHHHHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HHHH-TSEEECC-------S
T ss_pred CCEEEECCCCHHHHHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchh----hhcC-CceEECC-------C
Confidence 48888855554 578888888 999884 456699999999999887666655 2456 8887764 2
Q ss_pred CHHHHHHHHHHhhcccCCcchHHHHHHHHH
Q 037721 410 GKEDIFKAVKTVMVDVNKEPGASIRANQKW 439 (465)
Q Consensus 410 ~~~~l~~ai~~ll~~~~~~~~~~~~~~a~~ 439 (465)
++++|.++|.++++ |++.++++.+
T Consensus 320 d~~~la~~i~~ll~------d~~~~~~~~~ 343 (376)
T 1v4v_A 320 DPEGVYRVVKGLLE------NPEELSRMRK 343 (376)
T ss_dssp CHHHHHHHHHHHHT------CHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh------ChHhhhhhcc
Confidence 78999999999998 7766655444
No 26
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.32 E-value=2.8e-10 Score=113.68 Aligned_cols=336 Identities=13% Similarity=0.065 Sum_probs=169.7
Q ss_pred CCCcEEEEecC-----------CCccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhcccCCCCCeeEEEccCCCCCCC
Q 037721 8 ADQLHVVMFPW-----------FAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSSLNLTPMADIIPLQIPHVDGL 76 (465)
Q Consensus 8 ~~~~~il~~~~-----------~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~~g~~~~~~~~~~l~~~~~~~~ 76 (465)
.+.+||++++. ...|+-..+..|++.|.++||+|++++.......-.. ....++++++.++......+
T Consensus 18 ~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~-~~~~~~v~v~~~~~~~~~~~ 96 (438)
T 3c48_A 18 GSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEI-VRVAENLRVINIAAGPYEGL 96 (438)
T ss_dssp -CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSE-EEEETTEEEEEECCSCSSSC
T ss_pred cchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCccc-ccccCCeEEEEecCCCcccc
Confidence 44689999885 2368888999999999999999999987654221100 00012377777762111000
Q ss_pred CCCCCCCCCCchHHHHHHHHHHHhhHHHHHHH-Hhhc-CCcEEEEcCCCc--ccccccccccCCeeEEEecchHHHHHHH
Q 037721 77 PPGLDSTSEMTPHMAELLKQALDLMQPQIKTL-LSQL-KPHFVFFDFTHY--WLPGLVGSQLGIKTVNFSVFSAISQAYL 152 (465)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~-~pD~vi~D~~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~ 152 (465)
......... .. ....+.+. ++.. +||+|++..... .+..+ ++.+++|+|.......... .
T Consensus 97 -----~~~~~~~~~----~~----~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~-~~~~~~p~v~~~h~~~~~~--~ 160 (438)
T 3c48_A 97 -----SKEELPTQL----AA----FTGGMLSFTRREKVTYDLIHSHYWLSGQVGWLL-RDLWRIPLIHTAHTLAAVK--N 160 (438)
T ss_dssp -----CGGGGGGGH----HH----HHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHH-HHHHTCCEEEECSSCHHHH--S
T ss_pred -----chhHHHHHH----HH----HHHHHHHHHHhccCCCCEEEeCCccHHHHHHHH-HHHcCCCEEEEecCCcccc--c
Confidence 011111111 11 11122222 4444 499998765221 12345 7778999987655432211 0
Q ss_pred hccccccCCcccccCCCCCCCCCCccCCCChhhhhhhhhhhhcCCCCchhhhhcccccCCccEEEEcCccccccchHHHH
Q 037721 153 VVPARKLNNSLADLMKSPDGFPATSITSLDEFVARDYLYVYTKFNGGPSVYERGIQGVDGCDVLAIKTCNEMEGPYLDFV 232 (465)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~ 232 (465)
..+.. . ... ..... ..+ ....+..++.++..|-... +.+
T Consensus 161 ------------------~~~~~---~-~~~---~~~~~---------~~~--~~~~~~~~d~ii~~s~~~~-----~~~ 199 (438)
T 3c48_A 161 ------------------SYRDD---S-DTP---ESEAR---------RIC--EQQLVDNADVLAVNTQEEM-----QDL 199 (438)
T ss_dssp ------------------CC--------CCH---HHHHH---------HHH--HHHHHHHCSEEEESSHHHH-----HHH
T ss_pred ------------------ccccc---c-CCc---chHHH---------HHH--HHHHHhcCCEEEEcCHHHH-----HHH
Confidence 00000 0 000 00000 000 0112345777777663222 222
Q ss_pred HhhC---CCCeEeeccCCCCCCC-CCcchh---hhccccCCCCCCeEEEEEeCCccc-CCHHHHHHHHHHHHhc--CCCe
Q 037721 233 RTQF---KKPVLLTGPLVNPEPP-SGELEE---RWAKWLCKYPPKSVIYCSFGSETF-LTVDQIKELAIGLEIT--GLPF 302 (465)
Q Consensus 233 ~~~~---~~~~~~vGp~~~~~~~-~~~~~~---~~~~~l~~~~~~~~v~vs~GS~~~-~~~~~~~~i~~al~~~--~~~~ 302 (465)
...+ ..++..+..- ..... ...... .+.+-+...+ +..+++..|+... .+.+.+...+..+... +.++
T Consensus 200 ~~~~g~~~~k~~vi~ng-vd~~~~~~~~~~~~~~~r~~~~~~~-~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~~ 277 (438)
T 3c48_A 200 MHHYDADPDRISVVSPG-ADVELYSPGNDRATERSRRELGIPL-HTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNL 277 (438)
T ss_dssp HHHHCCCGGGEEECCCC-CCTTTSCCC----CHHHHHHTTCCS-SSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCSE
T ss_pred HHHhCCChhheEEecCC-ccccccCCcccchhhhhHHhcCCCC-CCcEEEEEeeecccCCHHHHHHHHHHHHhhCCCcce
Confidence 2211 1345555533 21110 000000 1222222222 3356677787653 3445555555555432 2233
Q ss_pred -EEEEcCCCCCCCcccccccCChhhhh---hcC-CCceEEecccchH---hhhccccceeeccc----CChhhHHHHHHh
Q 037721 303 -FLVLNFPPNVDGQSELVRTLPPGFMD---RVK-DRGVVHTGWVQQQ---LILRHESVGCYVCH----SGFSSVTEAVIS 370 (465)
Q Consensus 303 -i~~~~~~~~~~~~~~~~~~lp~~~~~---~~~-~~nv~~~~~~pq~---~vL~~~~~~~~ItH----gG~~s~~Eal~~ 370 (465)
++.+|.... .+...+.+.+ +.+ ..++.+.+|+|+. +++..+++ +|.- |..++++||+++
T Consensus 278 ~l~i~G~~~~-------~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~ 348 (438)
T 3c48_A 278 RVIICGGPSG-------PNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQAS 348 (438)
T ss_dssp EEEEECCBC-------------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHT
T ss_pred EEEEEeCCCC-------CCcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHc
Confidence 334443100 0011112221 111 3589999999864 57778888 6643 334689999999
Q ss_pred CCceeeccccccchhhHHHHhhhhcceEEeeecCCCCccCHHHHHHHHHHhhc
Q 037721 371 DCQLVLLPLKGDQFLNSKLVAGDLKAGVEVNRRDHDGHFGKEDIFKAVKTVMV 423 (465)
Q Consensus 371 GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~ll~ 423 (465)
|+|+|+.+ .......+++. +.|+.++. -+.+++.++|.++++
T Consensus 349 G~PvI~~~----~~~~~e~i~~~-~~g~~~~~------~d~~~la~~i~~l~~ 390 (438)
T 3c48_A 349 GTPVIAAR----VGGLPIAVAEG-ETGLLVDG------HSPHAWADALATLLD 390 (438)
T ss_dssp TCCEEEES----CTTHHHHSCBT-TTEEEESS------CCHHHHHHHHHHHHH
T ss_pred CCCEEecC----CCChhHHhhCC-CcEEECCC------CCHHHHHHHHHHHHc
Confidence 99999965 34556667666 78888775 389999999999998
No 27
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.27 E-value=2.5e-09 Score=105.46 Aligned_cols=342 Identities=11% Similarity=-0.010 Sum_probs=180.0
Q ss_pred CcEEEEecCC---C-ccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhcccCCCCCeeEEEccCCCCCCCCCCCCCCCC
Q 037721 10 QLHVVMFPWF---A-FGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSSLNLTPMADIIPLQIPHVDGLPPGLDSTSE 85 (465)
Q Consensus 10 ~~~il~~~~~---~-~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 85 (465)
++||+++... . .|.-.-+..+++.|.++||+|++++............. .. .++..++ .. ..
T Consensus 20 ~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~-~~-~~~~~~~--------~~-~~--- 85 (406)
T 2gek_A 20 HMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVV-SG-GKAVPIP--------YN-GS--- 85 (406)
T ss_dssp -CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEE-EC-CCCC-------------------
T ss_pred cceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccc-cC-CcEEecc--------cc-CC---
Confidence 6899998742 2 56668899999999999999999998755331111100 00 0111111 00 00
Q ss_pred CchHHHHHHHHHHHhhHHHHHHHHhhcCCcEEEEcCCCccc--ccccccccCCeeEEEecchHHHHHHHhccccccCCcc
Q 037721 86 MTPHMAELLKQALDLMQPQIKTLLSQLKPHFVFFDFTHYWL--PGLVGSQLGIKTVNFSVFSAISQAYLVVPARKLNNSL 163 (465)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~vi~D~~~~~~--~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~ 163 (465)
..... ........+.+++++.+||+|++....... ..+ ++..++|+|......
T Consensus 86 ----~~~~~--~~~~~~~~l~~~l~~~~~Dii~~~~~~~~~~~~~~-~~~~~~~~i~~~h~~------------------ 140 (406)
T 2gek_A 86 ----VARLR--FGPATHRKVKKWIAEGDFDVLHIHEPNAPSLSMLA-LQAAEGPIVATFHTS------------------ 140 (406)
T ss_dssp -----------CCHHHHHHHHHHHHHHCCSEEEEECCCSSSHHHHH-HHHEESSEEEEECCC------------------
T ss_pred ----ccccc--ccHHHHHHHHHHHHhcCCCEEEECCccchHHHHHH-HHhcCCCEEEEEcCc------------------
Confidence 00000 000122456777888899999976643332 345 667799998764421
Q ss_pred cccCCCCCCCCCCccCCCChhhhhhhhhhhhcCCCCchhhhhcccccCCccEEEEcCccccccchHHHHHhhCC-CCeEe
Q 037721 164 ADLMKSPDGFPATSITSLDEFVARDYLYVYTKFNGGPSVYERGIQGVDGCDVLAIKTCNEMEGPYLDFVRTQFK-KPVLL 242 (465)
Q Consensus 164 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~-~~~~~ 242 (465)
.+ .......+. ..+ ...+..++.++..|-... +.+...++ .++ .
T Consensus 141 ---------~~-------~~~~~~~~~----------~~~---~~~~~~~d~ii~~s~~~~-----~~~~~~~~~~~~-v 185 (406)
T 2gek_A 141 ---------TT-------KSLTLSVFQ----------GIL---RPYHEKIIGRIAVSDLAR-----RWQMEALGSDAV-E 185 (406)
T ss_dssp ---------CC-------SHHHHHHHH----------STT---HHHHTTCSEEEESSHHHH-----HHHHHHHSSCEE-E
T ss_pred ---------ch-------hhhhHHHHH----------HHH---HHHHhhCCEEEECCHHHH-----HHHHHhcCCCcE-E
Confidence 01 000001000 000 022456777777663221 22222222 233 4
Q ss_pred eccCCCCCCCCCcchhhhccccCCCCCCeEEEEEeCCc-cc-CCHHHHHHHHHHHHhc--CCCeEEEEcCCCCCCCcccc
Q 037721 243 TGPLVNPEPPSGELEERWAKWLCKYPPKSVIYCSFGSE-TF-LTVDQIKELAIGLEIT--GLPFFLVLNFPPNVDGQSEL 318 (465)
Q Consensus 243 vGp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~-~~-~~~~~~~~i~~al~~~--~~~~i~~~~~~~~~~~~~~~ 318 (465)
+..- . +...-.....-....+ +..+++..|+. .. .+.+.+...+..+... +++++ .+|.+.
T Consensus 186 i~~~-v----~~~~~~~~~~~~~~~~-~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~-i~G~~~-------- 250 (406)
T 2gek_A 186 IPNG-V----DVASFADAPLLDGYPR-EGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEIL-IVGRGD-------- 250 (406)
T ss_dssp CCCC-B----CHHHHHTCCCCTTCSC-SSCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEE-EESCSC--------
T ss_pred ecCC-C----ChhhcCCCchhhhccC-CCeEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEE-EEcCCc--------
Confidence 3322 1 0000000000000011 12466677876 32 4445555555555433 34443 344431
Q ss_pred cccCChhhhhhcC--CCceEEecccchH---hhhccccceeecc----cCCh-hhHHHHHHhCCceeeccccccchhhHH
Q 037721 319 VRTLPPGFMDRVK--DRGVVHTGWVQQQ---LILRHESVGCYVC----HSGF-SSVTEAVISDCQLVLLPLKGDQFLNSK 388 (465)
Q Consensus 319 ~~~lp~~~~~~~~--~~nv~~~~~~pq~---~vL~~~~~~~~It----HgG~-~s~~Eal~~GvP~l~~P~~~DQ~~na~ 388 (465)
. +.+.+... ..++.+.+|+++. +++..+++ +|. +.|+ ++++||+++|+|+|+.+. .....
T Consensus 251 ~----~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e 320 (406)
T 2gek_A 251 E----DELREQAGDLAGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRR 320 (406)
T ss_dssp H----HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHH
T ss_pred H----HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHH
Confidence 1 22222111 4589999999975 68888888 653 3444 489999999999999755 55666
Q ss_pred HHhhhhcceEEeeecCCCCccCHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHh
Q 037721 389 LVAGDLKAGVEVNRRDHDGHFGKEDIFKAVKTVMVDVNKEPGASIRANQKWWREFLLNGQIQDKFIADFVKDLKA 463 (465)
Q Consensus 389 ~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~l~~ 463 (465)
.+.+. +.|+.++.. +.+++.++|.++++ +++.+++..+-+....+.-+.+..++.+.+.+++
T Consensus 321 ~i~~~-~~g~~~~~~------d~~~l~~~i~~l~~------~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 382 (406)
T 2gek_A 321 VLADG-DAGRLVPVD------DADGMAAALIGILE------DDQLRAGYVARASERVHRYDWSVVSAQIMRVYET 382 (406)
T ss_dssp HHTTT-TSSEECCTT------CHHHHHHHHHHHHH------CHHHHHHHHHHHHHHGGGGBHHHHHHHHHHHHHH
T ss_pred HhcCC-CceEEeCCC------CHHHHHHHHHHHHc------CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 77766 788877653 88999999999998 6655444433333322233445555666555544
No 28
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.27 E-value=2e-09 Score=105.54 Aligned_cols=346 Identities=11% Similarity=-0.011 Sum_probs=184.6
Q ss_pred CCcEEEEecC--C--CccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhcccCCCCCeeEEEccCCCCCCCCCCCCCCC
Q 037721 9 DQLHVVMFPW--F--AFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSSLNLTPMADIIPLQIPHVDGLPPGLDSTS 84 (465)
Q Consensus 9 ~~~~il~~~~--~--~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~ 84 (465)
+++||++++. + ..|.-.-+..|++.| +||+|++++............ ...++.+..++. .....
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~----- 70 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYD-KTLDYEVIRWPR----SVMLP----- 70 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHH-TTCSSEEEEESS----SSCCS-----
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhc-cccceEEEEccc----ccccc-----
Confidence 3568988864 3 578888999999999 799999999887654211100 012377777761 10000
Q ss_pred CCchHHHHHHHHHHHhhHHHHHHHHhhcCCcEEEEcCCCcc--cccccccccCCeeEEE-ecchHHHHHHHhccccccCC
Q 037721 85 EMTPHMAELLKQALDLMQPQIKTLLSQLKPHFVFFDFTHYW--LPGLVGSQLGIKTVNF-SVFSAISQAYLVVPARKLNN 161 (465)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~vi~D~~~~~--~~~~~A~~~giP~v~~-~~~~~~~~~~~~~~~~~~~~ 161 (465)
.. .....+.+++++.+||+|++....+. ...+ ++.+++|.+++ ........
T Consensus 71 -~~------------~~~~~l~~~~~~~~~Dvv~~~~~~~~~~~~~~-~~~~~~~~~i~~~h~~~~~~------------ 124 (394)
T 3okp_A 71 -TP------------TTAHAMAEIIREREIDNVWFGAAAPLALMAGT-AKQAGASKVIASTHGHEVGW------------ 124 (394)
T ss_dssp -CH------------HHHHHHHHHHHHTTCSEEEESSCTTGGGGHHH-HHHTTCSEEEEECCSTHHHH------------
T ss_pred -ch------------hhHHHHHHHHHhcCCCEEEECCcchHHHHHHH-HHhcCCCcEEEEeccchhhh------------
Confidence 00 12346678888889999997654333 2345 77889984443 22211110
Q ss_pred cccccCCCCCCCCCCccCCCChhhhhhhhhhhhcCCCCchhhhhcccccCCccEEEEcCccccccchHHHHHhhC--CCC
Q 037721 162 SLADLMKSPDGFPATSITSLDEFVARDYLYVYTKFNGGPSVYERGIQGVDGCDVLAIKTCNEMEGPYLDFVRTQF--KKP 239 (465)
Q Consensus 162 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~--~~~ 239 (465)
........+. ...++.++.++..|-... +.+...+ ..+
T Consensus 125 -------------------~~~~~~~~~~----------------~~~~~~~d~ii~~s~~~~-----~~~~~~~~~~~~ 164 (394)
T 3okp_A 125 -------------------SMLPGSRQSL----------------RKIGTEVDVLTYISQYTL-----RRFKSAFGSHPT 164 (394)
T ss_dssp -------------------TTSHHHHHHH----------------HHHHHHCSEEEESCHHHH-----HHHHHHHCSSSE
T ss_pred -------------------hhcchhhHHH----------------HHHHHhCCEEEEcCHHHH-----HHHHHhcCCCCC
Confidence 0000000000 111245677776663221 2222222 234
Q ss_pred eEeeccCCCCCCC----CCcchhhhccccCCCCCCeEEEEEeCCccc-CCHHHHHHHHHHHHhc--CCCeEEEEcCCCCC
Q 037721 240 VLLTGPLVNPEPP----SGELEERWAKWLCKYPPKSVIYCSFGSETF-LTVDQIKELAIGLEIT--GLPFFLVLNFPPNV 312 (465)
Q Consensus 240 ~~~vGp~~~~~~~----~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~-~~~~~~~~i~~al~~~--~~~~i~~~~~~~~~ 312 (465)
+..+..- ..... ......++.+.+...+ +..+++..|+... .+.+.+.+.+..+... ++++++ +|.+...
T Consensus 165 ~~vi~ng-v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i-~G~g~~~ 241 (394)
T 3okp_A 165 FEHLPSG-VDVKRFTPATPEDKSATRKKLGFTD-TTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLI-VGSGRYE 241 (394)
T ss_dssp EEECCCC-BCTTTSCCCCHHHHHHHHHHTTCCT-TCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEE-ECCCTTH
T ss_pred eEEecCC-cCHHHcCCCCchhhHHHHHhcCCCc-CceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEE-EcCchHH
Confidence 5555532 21110 0111122333333222 3356677787643 3455555555555433 444444 3433110
Q ss_pred CCcccccccCChhhhhhcCCCceEEecccchHh---hhccccceeecc-----------cCChhhHHHHHHhCCceeecc
Q 037721 313 DGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQL---ILRHESVGCYVC-----------HSGFSSVTEAVISDCQLVLLP 378 (465)
Q Consensus 313 ~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~---vL~~~~~~~~It-----------HgG~~s~~Eal~~GvP~l~~P 378 (465)
+ ...... .+. ..++.+.+|+|+.+ ++..+++ +|. -|..++++||+++|+|+|+.+
T Consensus 242 ~---~l~~~~-~~~-----~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~ 310 (394)
T 3okp_A 242 S---TLRRLA-TDV-----SQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGT 310 (394)
T ss_dssp H---HHHHHT-GGG-----GGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECS
T ss_pred H---HHHHHH-hcc-----cCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEEEeC
Confidence 0 000001 111 24899999997654 6777888 665 555679999999999999976
Q ss_pred ccccchhhHHHHhhhhcceEEeeecCCCCccCHHHHHHHHHHhhcccCCcchHHHHHHHHHH-HHHHHcCCchHHHHHHH
Q 037721 379 LKGDQFLNSKLVAGDLKAGVEVNRRDHDGHFGKEDIFKAVKTVMVDVNKEPGASIRANQKWW-REFLLNGQIQDKFIADF 457 (465)
Q Consensus 379 ~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~a~~l-~~~~~~~~~~~~~~~~~ 457 (465)
..+ ....+ .. |.|+.++. -+.+++.++|.++++ +++.+++..+- .+.+++.-+.+..++.+
T Consensus 311 ~~~----~~e~i-~~-~~g~~~~~------~d~~~l~~~i~~l~~------~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 372 (394)
T 3okp_A 311 SGG----APETV-TP-ATGLVVEG------SDVDKLSELLIELLD------DPIRRAAMGAAGRAHVEAEWSWEIMGERL 372 (394)
T ss_dssp STT----GGGGC-CT-TTEEECCT------TCHHHHHHHHHHHHT------CHHHHHHHHHHHHHHHHHHTBHHHHHHHH
T ss_pred CCC----hHHHH-hc-CCceEeCC------CCHHHHHHHHHHHHh------CHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 532 22223 34 67777765 389999999999998 55444333222 22233323455566666
Q ss_pred HHHHHhh
Q 037721 458 VKDLKAL 464 (465)
Q Consensus 458 ~~~l~~~ 464 (465)
++.++++
T Consensus 373 ~~~~~~~ 379 (394)
T 3okp_A 373 TNILQSE 379 (394)
T ss_dssp HHHHHSC
T ss_pred HHHHHHh
Confidence 6666543
No 29
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.27 E-value=2.6e-10 Score=112.63 Aligned_cols=107 Identities=11% Similarity=0.016 Sum_probs=74.0
Q ss_pred CceEEecccc---hHhhhccccceeecccCChhhHHHHHHhCCceeeccccccchhhHHHHhhhhcceEEeeecCCCCcc
Q 037721 333 RGVVHTGWVQ---QQLILRHESVGCYVCHSGFSSVTEAVISDCQLVLLPLKGDQFLNSKLVAGDLKAGVEVNRRDHDGHF 409 (465)
Q Consensus 333 ~nv~~~~~~p---q~~vL~~~~~~~~ItHgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~ 409 (465)
.++.+.++++ ...+++.+++ +|+-+|..+ .||.++|+|+|+.|-.++++. +.+. |.|+.+. .
T Consensus 282 ~~v~l~~~l~~~~~~~l~~~ad~--vv~~SGg~~-~EA~a~g~PvV~~~~~~~~~e----~v~~-g~~~lv~-------~ 346 (403)
T 3ot5_A 282 ERIHLIEPLDAIDFHNFLRKSYL--VFTDSGGVQ-EEAPGMGVPVLVLRDTTERPE----GIEA-GTLKLIG-------T 346 (403)
T ss_dssp TTEEEECCCCHHHHHHHHHHEEE--EEECCHHHH-HHGGGTTCCEEECCSSCSCHH----HHHH-TSEEECC-------S
T ss_pred CCEEEeCCCCHHHHHHHHHhcCE--EEECCccHH-HHHHHhCCCEEEecCCCcchh----heeC-CcEEEcC-------C
Confidence 5898989886 3467888888 999886333 799999999999976666654 2467 9887665 2
Q ss_pred CHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHHHcCCchHHHHHHHHHH
Q 037721 410 GKEDIFKAVKTVMVDVNKEPGASIRANQKWWREFLLNGQIQDKFIADFVKD 460 (465)
Q Consensus 410 ~~~~l~~ai~~ll~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~ 460 (465)
++++|.+++.++++ +++.++++.+-+....+.+.+++.++.+.+.
T Consensus 347 d~~~l~~ai~~ll~------~~~~~~~m~~~~~~~g~~~aa~rI~~~l~~~ 391 (403)
T 3ot5_A 347 NKENLIKEALDLLD------NKESHDKMAQAANPYGDGFAANRILAAIKSH 391 (403)
T ss_dssp CHHHHHHHHHHHHH------CHHHHHHHHHSCCTTCCSCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHc------CHHHHHHHHhhcCcccCCcHHHHHHHHHHHH
Confidence 78999999999998 7776665544333332333334444444433
No 30
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.26 E-value=4.9e-11 Score=117.66 Aligned_cols=87 Identities=10% Similarity=0.041 Sum_probs=65.1
Q ss_pred CCceEEecccc---hHhhhccccceeecccCChhhHHHHHHhCCceeeccccccchhhHHHHhhhhcceEEeeecCCCCc
Q 037721 332 DRGVVHTGWVQ---QQLILRHESVGCYVCHSGFSSVTEAVISDCQLVLLPLKGDQFLNSKLVAGDLKAGVEVNRRDHDGH 408 (465)
Q Consensus 332 ~~nv~~~~~~p---q~~vL~~~~~~~~ItHgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~ 408 (465)
..++.+.++++ ...+++.+++ ||+-+| |.+.||.++|+|+|+..-..+++ .+.+. |.++.+.
T Consensus 287 ~~~v~~~~~lg~~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~----e~v~~-G~~~lv~------- 351 (396)
T 3dzc_A 287 VSNIVLIEPQQYLPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERP----EAVAA-GTVKLVG------- 351 (396)
T ss_dssp CTTEEEECCCCHHHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCH----HHHHH-TSEEECT-------
T ss_pred CCCEEEeCCCCHHHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcch----HHHHc-CceEEcC-------
Confidence 35888877764 4568888888 999998 66689999999999976555543 24566 8775543
Q ss_pred cCHHHHHHHHHHhhcccCCcchHHHHHHHHH
Q 037721 409 FGKEDIFKAVKTVMVDVNKEPGASIRANQKW 439 (465)
Q Consensus 409 ~~~~~l~~ai~~ll~~~~~~~~~~~~~~a~~ 439 (465)
.++++|.+++.++++ +++.++++.+
T Consensus 352 ~d~~~l~~ai~~ll~------d~~~~~~m~~ 376 (396)
T 3dzc_A 352 TNQQQICDALSLLLT------DPQAYQAMSQ 376 (396)
T ss_dssp TCHHHHHHHHHHHHH------CHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHc------CHHHHHHHhh
Confidence 268999999999998 7776655444
No 31
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.25 E-value=2.5e-10 Score=111.93 Aligned_cols=138 Identities=11% Similarity=0.061 Sum_probs=86.3
Q ss_pred CCeEEEEEeCCcccCCHHHHHHHHHHHHh-----cCCCeEEEEcCCCCCCCcccccccCChhhhhhcC-CCceEEecccc
Q 037721 269 PKSVIYCSFGSETFLTVDQIKELAIGLEI-----TGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVK-DRGVVHTGWVQ 342 (465)
Q Consensus 269 ~~~~v~vs~GS~~~~~~~~~~~i~~al~~-----~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~nv~~~~~~p 342 (465)
+++.++++.|......+ .+..++++++. .++++++..+.+. ..-+.+.+... ..++.+.++++
T Consensus 204 ~~~~vl~~~gr~~~~~k-g~~~li~a~~~l~~~~~~~~l~i~~g~~~----------~~~~~l~~~~~~~~~v~~~g~~~ 272 (384)
T 1vgv_A 204 DKKMILVTGHRRESFGR-GFEEICHALADIATTHQDIQIVYPVHLNP----------NVREPVNRILGHVKNVILIDPQE 272 (384)
T ss_dssp TSEEEEEECCCBSSCCH-HHHHHHHHHHHHHHHCTTEEEEEECCBCH----------HHHHHHHHHHTTCTTEEEECCCC
T ss_pred CCCEEEEEeCCccccch-HHHHHHHHHHHHHhhCCCeEEEEEcCCCH----------HHHHHHHHHhhcCCCEEEeCCCC
Confidence 35678888887653322 33444444432 2445555433210 00011111111 25888866665
Q ss_pred h---HhhhccccceeecccCChhhHHHHHHhCCceeeccccccchhhHHHHhhhhcceEEeeecCCCCccCHHHHHHHHH
Q 037721 343 Q---QLILRHESVGCYVCHSGFSSVTEAVISDCQLVLLPLKGDQFLNSKLVAGDLKAGVEVNRRDHDGHFGKEDIFKAVK 419 (465)
Q Consensus 343 q---~~vL~~~~~~~~ItHgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~ 419 (465)
+ .++++.+++ ||+.+|. +++||+++|+|+|+.+..+++. .+.+. |.|+.++. ++++|.++|.
T Consensus 273 ~~~~~~~~~~ad~--~v~~Sg~-~~lEA~a~G~PvI~~~~~~~~~----e~v~~-g~g~lv~~-------d~~~la~~i~ 337 (384)
T 1vgv_A 273 YLPFVWLMNHAWL--ILTDSGG-IQEEAPSLGKPVLVMRDTTERP----EAVTA-GTVRLVGT-------DKQRIVEEVT 337 (384)
T ss_dssp HHHHHHHHHHCSE--EEESSST-GGGTGGGGTCCEEEESSCCSCH----HHHHH-TSEEEECS-------SHHHHHHHHH
T ss_pred HHHHHHHHHhCcE--EEECCcc-hHHHHHHcCCCEEEccCCCCcc----hhhhC-CceEEeCC-------CHHHHHHHHH
Confidence 4 567888898 9999864 4889999999999998754433 24566 88877753 7899999999
Q ss_pred HhhcccCCcchHHHHHHHH
Q 037721 420 TVMVDVNKEPGASIRANQK 438 (465)
Q Consensus 420 ~ll~~~~~~~~~~~~~~a~ 438 (465)
++++ |++.++++.
T Consensus 338 ~ll~------d~~~~~~~~ 350 (384)
T 1vgv_A 338 RLLK------DENEYQAMS 350 (384)
T ss_dssp HHHH------CHHHHHHHH
T ss_pred HHHh------ChHHHhhhh
Confidence 9998 666554433
No 32
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.24 E-value=1.9e-09 Score=107.37 Aligned_cols=165 Identities=12% Similarity=0.041 Sum_probs=100.5
Q ss_pred EEEEEeCCcc-c-CCHHHHHHHHHHHHh----cCCCeEEEEcCCCCCCCcccccccCChhhhhhcCCCceEEecccchHh
Q 037721 272 VIYCSFGSET-F-LTVDQIKELAIGLEI----TGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQL 345 (465)
Q Consensus 272 ~v~vs~GS~~-~-~~~~~~~~i~~al~~----~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~ 345 (465)
.+++..|+.. . .+.+.+.+.+..+.. .++++++ +|.+... ....+ ..+..+.+ .++.+.+|+++.+
T Consensus 252 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i-~G~g~~~-----~~~~l-~~~~~~~~-~~~~~~g~~~~~~ 323 (439)
T 3fro_A 252 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFII-IGKGDPE-----LEGWA-RSLEEKHG-NVKVITEMLSREF 323 (439)
T ss_dssp EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEE-ECCCCHH-----HHHHH-HHHHHHCT-TEEEECSCCCHHH
T ss_pred cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEE-EcCCChh-----HHHHH-HHHHhhcC-CEEEEcCCCCHHH
Confidence 6777788876 3 456766666666655 3444443 3433100 00011 11111222 4667788899764
Q ss_pred ---hhccccceeecc----cCChhhHHHHHHhCCceeeccccccchhhHHHHhhhhcceEEeeecCCCCccCHHHHHHHH
Q 037721 346 ---ILRHESVGCYVC----HSGFSSVTEAVISDCQLVLLPLKGDQFLNSKLVAGDLKAGVEVNRRDHDGHFGKEDIFKAV 418 (465)
Q Consensus 346 ---vL~~~~~~~~It----HgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai 418 (465)
++..+++ +|. -|-.++++||+++|+|+|+-.. ......++ . |.|..++.. +.+++.++|
T Consensus 324 ~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e~~~-~-~~g~~~~~~------d~~~la~~i 389 (439)
T 3fro_A 324 VRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDIIT-N-ETGILVKAG------DPGELANAI 389 (439)
T ss_dssp HHHHHTTCSE--EEECBSCCSSCHHHHHHHHTTCEEEEESS----THHHHHCC-T-TTCEEECTT------CHHHHHHHH
T ss_pred HHHHHHHCCE--EEeCCCCCCccHHHHHHHHCCCCeEEcCC----CCcceeEE-c-CceEEeCCC------CHHHHHHHH
Confidence 6777888 652 2334799999999999999643 34444443 5 788888763 899999999
Q ss_pred HHhhc-ccCCcchHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhh
Q 037721 419 KTVMV-DVNKEPGASIRANQKWWREFLLNGQIQDKFIADFVKDLKAL 464 (465)
Q Consensus 419 ~~ll~-~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~ 464 (465)
.++++ + .+....+.+++++..+. -+.+..++.+++.++++
T Consensus 390 ~~ll~~~--~~~~~~~~~~~~~~~~~----~s~~~~~~~~~~~~~~~ 430 (439)
T 3fro_A 390 LKALELS--RSDLSKFRENCKKRAMS----FSWEKSAERYVKAYTGS 430 (439)
T ss_dssp HHHHHHT--TTTTHHHHHHHHHHHHT----SCHHHHHHHHHHHHHTC
T ss_pred HHHHhcC--HHHHHHHHHHHHHHHhh----CcHHHHHHHHHHHHHHH
Confidence 99997 3 33335566666555533 24555666666666543
No 33
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.24 E-value=4.9e-09 Score=103.15 Aligned_cols=353 Identities=10% Similarity=0.046 Sum_probs=180.4
Q ss_pred CcEEEEecCCC-ccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhcccCCCCCeeEEEccCCCCCCCCCCCCCCCCCch
Q 037721 10 QLHVVMFPWFA-FGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSSLNLTPMADIIPLQIPHVDGLPPGLDSTSEMTP 88 (465)
Q Consensus 10 ~~~il~~~~~~-~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 88 (465)
++++....+|. .|.-.-+..|+++|.++||+|++++....... .. ..+++.+..++.+ .++. .....
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~-~~---~~~~i~~~~~~~~---~~~~----~~~~~- 82 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFRL-NK---VYPNIYFHEVTVN---QYSV----FQYPP- 82 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC-----C---CCTTEEEECCCCC-----------CCSCC-
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcc-cc---cCCceEEEecccc---cccc----ccccc-
Confidence 67788887774 55667888999999999999999997643221 11 1234666666521 1110 00011
Q ss_pred HHHHHHHHHHHhhHHHHHHHHhhcCCcEEEEcCCCcc--cccccccc-c--CCeeEEEecchHHHHHHHhccccccCCcc
Q 037721 89 HMAELLKQALDLMQPQIKTLLSQLKPHFVFFDFTHYW--LPGLVGSQ-L--GIKTVNFSVFSAISQAYLVVPARKLNNSL 163 (465)
Q Consensus 89 ~~~~~~~~~~~~~~~~l~~~l~~~~pD~vi~D~~~~~--~~~~~A~~-~--giP~v~~~~~~~~~~~~~~~~~~~~~~~~ 163 (465)
... .....+.+++++.+||+|++...... ...+ +.. + ++|+|.......... .
T Consensus 83 ~~~--------~~~~~l~~~l~~~~~Dvv~~~~~~~~~~~~~~-~~~~~~~~~p~v~~~h~~~~~~--~----------- 140 (394)
T 2jjm_A 83 YDL--------ALASKMAEVAQRENLDILHVHYAIPHAICAYL-AKQMIGERIKIVTTLHGTDITV--L----------- 140 (394)
T ss_dssp HHH--------HHHHHHHHHHHHHTCSEEEECSSTTHHHHHHH-HHHHTTTCSEEEEECCHHHHHT--T-----------
T ss_pred ccH--------HHHHHHHHHHHHcCCCEEEEcchhHHHHHHHH-HHHhhcCCCCEEEEEecCcccc--c-----------
Confidence 010 12245667788889999998753322 2233 333 3 599887644321110 0
Q ss_pred cccCCCCCCCCCCccCCCChhhhhhhhhhhhcCCCCchhhhhcccccCCccEEEEcCccccccchHHHHHhhC--CCCeE
Q 037721 164 ADLMKSPDGFPATSITSLDEFVARDYLYVYTKFNGGPSVYERGIQGVDGCDVLAIKTCNEMEGPYLDFVRTQF--KKPVL 241 (465)
Q Consensus 164 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~--~~~~~ 241 (465)
..-+ .. ..+. ...++.++.++..|-. ..+.+...+ +.++.
T Consensus 141 -------~~~~------~~----~~~~----------------~~~~~~ad~ii~~s~~-----~~~~~~~~~~~~~~~~ 182 (394)
T 2jjm_A 141 -------GSDP------SL----NNLI----------------RFGIEQSDVVTAVSHS-----LINETHELVKPNKDIQ 182 (394)
T ss_dssp -------TTCT------TT----HHHH----------------HHHHHHSSEEEESCHH-----HHHHHHHHTCCSSCEE
T ss_pred -------CCCH------HH----HHHH----------------HHHHhhCCEEEECCHH-----HHHHHHHhhCCcccEE
Confidence 0000 00 0000 0112456677765532 122222222 23566
Q ss_pred eeccCCCCCC-CCCcchhhhccccCCCCCCeEEEEEeCCccc-CCHHHHHHHHHHHHhc-CCCeEEEEcCCCCCCCcccc
Q 037721 242 LTGPLVNPEP-PSGELEERWAKWLCKYPPKSVIYCSFGSETF-LTVDQIKELAIGLEIT-GLPFFLVLNFPPNVDGQSEL 318 (465)
Q Consensus 242 ~vGp~~~~~~-~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~-~~~~~~~~i~~al~~~-~~~~i~~~~~~~~~~~~~~~ 318 (465)
.+..- .... .......++.+-+...+ +..+++..|.... .+.+.+.+.+..+... +.++ +.+|.+..
T Consensus 183 vi~ng-v~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l-~i~G~g~~------- 252 (394)
T 2jjm_A 183 TVYNF-IDERVYFKRDMTQLKKEYGISE-SEKILIHISNFRKVKRVQDVVQAFAKIVTEVDAKL-LLVGDGPE------- 252 (394)
T ss_dssp ECCCC-CCTTTCCCCCCHHHHHHTTCC----CEEEEECCCCGGGTHHHHHHHHHHHHHSSCCEE-EEECCCTT-------
T ss_pred EecCC-ccHHhcCCcchHHHHHHcCCCC-CCeEEEEeeccccccCHHHHHHHHHHHHhhCCCEE-EEECCchH-------
Confidence 65533 2111 10001112222222112 2345566777653 3445555544444432 4443 44444311
Q ss_pred cccCChhhhhhcC-CCceEEecccch-Hhhhccccceeec----ccCChhhHHHHHHhCCceeeccccccchhhHHHHhh
Q 037721 319 VRTLPPGFMDRVK-DRGVVHTGWVQQ-QLILRHESVGCYV----CHSGFSSVTEAVISDCQLVLLPLKGDQFLNSKLVAG 392 (465)
Q Consensus 319 ~~~lp~~~~~~~~-~~nv~~~~~~pq-~~vL~~~~~~~~I----tHgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~v~~ 392 (465)
...+ .....+.+ ..++.+.++..+ .+++..+++ +| .-|..++++||+++|+|+|+.+.. .....+.+
T Consensus 253 ~~~l-~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~~~e~v~~ 325 (394)
T 2jjm_A 253 FCTI-LQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG----GIPEVIQH 325 (394)
T ss_dssp HHHH-HHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT----TSTTTCCB
T ss_pred HHHH-HHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC----ChHHHhhc
Confidence 0000 00111111 246777777553 568888888 77 556667999999999999997642 33444555
Q ss_pred hhcceEEeeecCCCCccCHHHHHHHHHHhhcccCCcchHHHHHHHHH-HHHHHHcCCchHHHHHHHHHHHHhh
Q 037721 393 DLKAGVEVNRRDHDGHFGKEDIFKAVKTVMVDVNKEPGASIRANQKW-WREFLLNGQIQDKFIADFVKDLKAL 464 (465)
Q Consensus 393 ~~G~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~a~~-l~~~~~~~~~~~~~~~~~~~~l~~~ 464 (465)
. +.|+.++. -+.+++.++|.++++ +++.+++..+ ..+.+++.-+.++.++.+++.++++
T Consensus 326 ~-~~g~~~~~------~d~~~la~~i~~l~~------~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 385 (394)
T 2jjm_A 326 G-DTGYLCEV------GDTTGVADQAIQLLK------DEELHRNMGERARESVYEQFRSEKIVSQYETIYYDV 385 (394)
T ss_dssp T-TTEEEECT------TCHHHHHHHHHHHHH------CHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHT
T ss_pred C-CceEEeCC------CCHHHHHHHHHHHHc------CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 5 67877765 388999999999998 5554433322 2222323334455566666655543
No 34
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.15 E-value=3.1e-09 Score=108.13 Aligned_cols=79 Identities=22% Similarity=0.075 Sum_probs=60.2
Q ss_pred CCceEEecccchH---hhhccc----cceeeccc----CChhhHHHHHHhCCceeeccccccchhhHHHHhhhhcceEEe
Q 037721 332 DRGVVHTGWVQQQ---LILRHE----SVGCYVCH----SGFSSVTEAVISDCQLVLLPLKGDQFLNSKLVAGDLKAGVEV 400 (465)
Q Consensus 332 ~~nv~~~~~~pq~---~vL~~~----~~~~~ItH----gG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l 400 (465)
..++.+.+++|+. +++..+ ++ +|.- |-..+++||+++|+|+|+... ......+.+. ..|+.+
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~-~~g~l~ 406 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEILDGG-KYGVLV 406 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHTGGG-TSSEEE
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHhcCC-ceEEEe
Confidence 3579999999765 467777 77 6632 334689999999999999653 4455666665 688888
Q ss_pred eecCCCCccCHHHHHHHHHHhhc
Q 037721 401 NRRDHDGHFGKEDIFKAVKTVMV 423 (465)
Q Consensus 401 ~~~~~~~~~~~~~l~~ai~~ll~ 423 (465)
+.. +.+++.++|.++++
T Consensus 407 ~~~------d~~~la~~i~~ll~ 423 (499)
T 2r60_A 407 DPE------DPEDIARGLLKAFE 423 (499)
T ss_dssp CTT------CHHHHHHHHHHHHS
T ss_pred CCC------CHHHHHHHHHHHHh
Confidence 763 89999999999998
No 35
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.13 E-value=3.4e-09 Score=102.15 Aligned_cols=125 Identities=14% Similarity=0.059 Sum_probs=78.8
Q ss_pred EEEEeCCcccCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhhhhhcCCCceEEecccchH---hhhcc
Q 037721 273 IYCSFGSETFLTVDQIKELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQ---LILRH 349 (465)
Q Consensus 273 v~vs~GS~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~---~vL~~ 349 (465)
+++..|+... ...+..++++++..+.+++++ |.+.. ...+ +.+....+ .++.+.+|+++. +++..
T Consensus 164 ~i~~vG~~~~--~Kg~~~li~a~~~~~~~l~i~-G~g~~-------~~~l-~~~~~~~~-~~v~~~g~~~~~~l~~~~~~ 231 (342)
T 2iuy_A 164 FLLFMGRVSP--HKGALEAAAFAHACGRRLVLA-GPAWE-------PEYF-DEITRRYG-STVEPIGEVGGERRLDLLAS 231 (342)
T ss_dssp CEEEESCCCG--GGTHHHHHHHHHHHTCCEEEE-SCCCC-------HHHH-HHHHHHHT-TTEEECCCCCHHHHHHHHHH
T ss_pred EEEEEecccc--ccCHHHHHHHHHhcCcEEEEE-eCccc-------HHHH-HHHHHHhC-CCEEEeccCCHHHHHHHHHh
Confidence 3445676542 233445566666557776554 43311 1111 11222222 689999999976 67888
Q ss_pred ccceeec--cc-----------CC-hhhHHHHHHhCCceeeccccccchhhHHHHhh--hhcceEEeeecCCCCccCHHH
Q 037721 350 ESVGCYV--CH-----------SG-FSSVTEAVISDCQLVLLPLKGDQFLNSKLVAG--DLKAGVEVNRRDHDGHFGKED 413 (465)
Q Consensus 350 ~~~~~~I--tH-----------gG-~~s~~Eal~~GvP~l~~P~~~DQ~~na~~v~~--~~G~G~~l~~~~~~~~~~~~~ 413 (465)
+++ +| +. -| .++++||+++|+|+|+... ......+++ . +.|+.++ . +.++
T Consensus 232 adv--~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~~~~~~-~~g~~~~------~-d~~~ 297 (342)
T 2iuy_A 232 AHA--VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIVPSVGE-VVGYGTD------F-APDE 297 (342)
T ss_dssp CSE--EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHGGGGEE-ECCSSSC------C-CHHH
T ss_pred CCE--EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHhcccCC-CceEEcC------C-CHHH
Confidence 888 65 22 33 4689999999999999765 446666766 4 5565443 3 7899
Q ss_pred HHHHHHHhhc
Q 037721 414 IFKAVKTVMV 423 (465)
Q Consensus 414 l~~ai~~ll~ 423 (465)
+.++|.++++
T Consensus 298 l~~~i~~l~~ 307 (342)
T 2iuy_A 298 ARRTLAGLPA 307 (342)
T ss_dssp HHHHHHTSCC
T ss_pred HHHHHHHHHH
Confidence 9999998884
No 36
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.10 E-value=9.3e-09 Score=100.26 Aligned_cols=84 Identities=10% Similarity=0.037 Sum_probs=62.6
Q ss_pred CceEEecccch---HhhhccccceeecccCChhhHHHHHHhCCceeeccccccchhhHHHHhhhhcceEEeeecCCCCcc
Q 037721 333 RGVVHTGWVQQ---QLILRHESVGCYVCHSGFSSVTEAVISDCQLVLLPLKGDQFLNSKLVAGDLKAGVEVNRRDHDGHF 409 (465)
Q Consensus 333 ~nv~~~~~~pq---~~vL~~~~~~~~ItHgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~ 409 (465)
.++.+.+++++ .+++..+++ ||+.+| ++++||+++|+|+|+.+..+.. ..+.+. |.|+.++.
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~----~e~v~~-g~g~~v~~------- 327 (375)
T 3beo_A 263 GRIHLIEPLDVIDFHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTER----PEGIEA-GTLKLAGT------- 327 (375)
T ss_dssp TTEEEECCCCHHHHHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSC----HHHHHT-TSEEECCS-------
T ss_pred CCEEEeCCCCHHHHHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCC----ceeecC-CceEEcCC-------
Confidence 58988777765 467778888 998874 5589999999999998543333 224566 88877652
Q ss_pred CHHHHHHHHHHhhcccCCcchHHHHHHH
Q 037721 410 GKEDIFKAVKTVMVDVNKEPGASIRANQ 437 (465)
Q Consensus 410 ~~~~l~~ai~~ll~~~~~~~~~~~~~~a 437 (465)
+.+++.++|.++++ |++.++++
T Consensus 328 d~~~la~~i~~ll~------~~~~~~~~ 349 (375)
T 3beo_A 328 DEETIFSLADELLS------DKEAHDKM 349 (375)
T ss_dssp CHHHHHHHHHHHHH------CHHHHHHH
T ss_pred CHHHHHHHHHHHHh------ChHhHhhh
Confidence 78999999999998 66655543
No 37
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.10 E-value=9e-09 Score=100.19 Aligned_cols=79 Identities=9% Similarity=0.153 Sum_probs=63.5
Q ss_pred CceEEecccch-Hhhhccccceeecc----cCChhhHHHHHHhCCceeeccccccchhhHHHHhhhhcceEEeeecCCCC
Q 037721 333 RGVVHTGWVQQ-QLILRHESVGCYVC----HSGFSSVTEAVISDCQLVLLPLKGDQFLNSKLVAGDLKAGVEVNRRDHDG 407 (465)
Q Consensus 333 ~nv~~~~~~pq-~~vL~~~~~~~~It----HgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 407 (465)
.++.+.++..+ .+++..+++ +|. -|..++++||+++|+|+|+.+. ..+...+++. +.|..++..
T Consensus 253 ~~v~~~g~~~~~~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~~~---- 321 (374)
T 2iw1_A 253 SNVHFFSGRNDVSELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIADA-NCGTVIAEP---- 321 (374)
T ss_dssp GGEEEESCCSCHHHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHHH-TCEEEECSS----
T ss_pred CcEEECCCcccHHHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhccC-CceEEeCCC----
Confidence 58888888654 568888888 664 4567899999999999999664 4556777887 899888732
Q ss_pred ccCHHHHHHHHHHhhc
Q 037721 408 HFGKEDIFKAVKTVMV 423 (465)
Q Consensus 408 ~~~~~~l~~ai~~ll~ 423 (465)
-+.+++.++|.++++
T Consensus 322 -~~~~~l~~~i~~l~~ 336 (374)
T 2iw1_A 322 -FSQEQLNEVLRKALT 336 (374)
T ss_dssp -CCHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHc
Confidence 489999999999998
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.04 E-value=2e-07 Score=92.20 Aligned_cols=168 Identities=14% Similarity=0.057 Sum_probs=96.5
Q ss_pred EEEEEeCCccc-CCHHHHHHHHHHHHhc--CCCeEEEEcCCCCCCCcccccccCChhhhhhcC-CCceEEecccc---h-
Q 037721 272 VIYCSFGSETF-LTVDQIKELAIGLEIT--GLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVK-DRGVVHTGWVQ---Q- 343 (465)
Q Consensus 272 ~v~vs~GS~~~-~~~~~~~~i~~al~~~--~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~nv~~~~~~p---q- 343 (465)
.+++..|.... .+.+.+.+.+..+... +++++++ |.+..... +....+ ..+....+ ..++.+.+|++ +
T Consensus 232 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~l~i~-G~g~~~~~--~~~~~l-~~~~~~~~~~~~V~~~G~~~~~~~~ 307 (416)
T 2x6q_A 232 PIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLV-GVMAHDDP--EGWIYF-EKTLRKIGEDYDVKVLTNLIGVHAR 307 (416)
T ss_dssp CEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCEEEEE-ECCCTTCH--HHHHHH-HHHHHHHTTCTTEEEEEGGGTCCHH
T ss_pred cEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEE-ecCcccch--hHHHHH-HHHHHHhCCCCcEEEecccCCCCHH
Confidence 45556677643 3455555555555432 4555554 43311000 000000 11112222 45899988876 2
Q ss_pred --HhhhccccceeecccC----ChhhHHHHHHhCCceeeccccccchhhHHHHhhhhcceEEeeecCCCCccCHHHHHHH
Q 037721 344 --QLILRHESVGCYVCHS----GFSSVTEAVISDCQLVLLPLKGDQFLNSKLVAGDLKAGVEVNRRDHDGHFGKEDIFKA 417 (465)
Q Consensus 344 --~~vL~~~~~~~~ItHg----G~~s~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~a 417 (465)
.+++..+++ +|.-. ..++++||+++|+|+|+.+. ..+...+.+. +.|..++ +.+++.++
T Consensus 308 ~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~~--------d~~~la~~ 372 (416)
T 2x6q_A 308 EVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLVR--------DANEAVEV 372 (416)
T ss_dssp HHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEES--------SHHHHHHH
T ss_pred HHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEEC--------CHHHHHHH
Confidence 357777888 66543 45689999999999999664 4566667666 6787764 57899999
Q ss_pred HHHhhcccCCcchHHHHHHHHHH-HHHHHcCCchHHHHHHHHHHHHhh
Q 037721 418 VKTVMVDVNKEPGASIRANQKWW-REFLLNGQIQDKFIADFVKDLKAL 464 (465)
Q Consensus 418 i~~ll~~~~~~~~~~~~~~a~~l-~~~~~~~~~~~~~~~~~~~~l~~~ 464 (465)
|.++++ +++.+++..+- .+.+++.-+.+..++.+++.++++
T Consensus 373 i~~ll~------~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~l 414 (416)
T 2x6q_A 373 VLYLLK------HPEVSKEMGAKAKERVRKNFIITKHMERYLDILNSL 414 (416)
T ss_dssp HHHHHH------CHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHTC
T ss_pred HHHHHh------CHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHh
Confidence 999998 55544433322 222332334455666666666543
No 39
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.98 E-value=2.1e-09 Score=105.28 Aligned_cols=316 Identities=15% Similarity=0.115 Sum_probs=162.5
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChh-hhhcccCCCCCeeEEEccCCCCCCCCCCCCCCCCCch
Q 037721 10 QLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIP-RIKSSLNLTPMADIIPLQIPHVDGLPPGLDSTSEMTP 88 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~-~i~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 88 (465)
.++++++ +|++-.+.-+.+|.++|.++ ++..++.+....+ .+.... ++-..|+.|+. .+..+ ....
T Consensus 9 ~~~~~~v-~GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~-----~~~~~i~~~~~-~l~~~---~~~~-- 75 (385)
T 4hwg_A 9 MLKVMTI-VGTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVF-----FDDMGIRKPDY-FLEVA---ADNT-- 75 (385)
T ss_dssp CCEEEEE-ECSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHH-----HC-CCCCCCSE-ECCCC---CCCS--
T ss_pred hhheeEE-EEcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHH-----HhhCCCCCCce-ecCCC---CCCH--
Confidence 4555554 45666777777777888777 9988888886654 222211 11111221110 11111 0111
Q ss_pred HHHHHHHHHHHhhHHHHHHHHhhcCCcEEEE--cCCCcccccccccccCCeeEEEecchHHHHHHHhccccccCCccccc
Q 037721 89 HMAELLKQALDLMQPQIKTLLSQLKPHFVFF--DFTHYWLPGLVGSQLGIKTVNFSVFSAISQAYLVVPARKLNNSLADL 166 (465)
Q Consensus 89 ~~~~~~~~~~~~~~~~l~~~l~~~~pD~vi~--D~~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (465)
..........+.+++++.+||+|++ |..+.++..+ |..+|||++-+.... .
T Consensus 76 ------~~~~~~~~~~l~~~l~~~kPD~Vlv~gd~~~~~aala-A~~~~IPv~h~eagl-r------------------- 128 (385)
T 4hwg_A 76 ------AKSIGLVIEKVDEVLEKEKPDAVLFYGDTNSCLSAIA-AKRRKIPIFHMEAGN-R------------------- 128 (385)
T ss_dssp ------HHHHHHHHHHHHHHHHHHCCSEEEEESCSGGGGGHHH-HHHTTCCEEEESCCC-C-------------------
T ss_pred ------HHHHHHHHHHHHHHHHhcCCcEEEEECCchHHHHHHH-HHHhCCCEEEEeCCC-c-------------------
Confidence 1222224567788899999999775 4445556566 899999976542100 0
Q ss_pred CCCC-CCCCCCccCCCChhhhhhhhhhhhcCCCCchhhhhcccccCCccEEEEcCccccccchHHHHHh-hC-CCCeEee
Q 037721 167 MKSP-DGFPATSITSLDEFVARDYLYVYTKFNGGPSVYERGIQGVDGCDVLAIKTCNEMEGPYLDFVRT-QF-KKPVLLT 243 (465)
Q Consensus 167 ~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~-~~-~~~~~~v 243 (465)
+. ..+| ....+.+.. ..++..+..+-. .-+.+.. -. +.+++.+
T Consensus 129 --s~~~~~p--------ee~nR~~~~-------------------~~a~~~~~~te~-----~~~~l~~~G~~~~~I~vt 174 (385)
T 4hwg_A 129 --CFDQRVP--------EEINRKIID-------------------HISDVNITLTEH-----ARRYLIAEGLPAELTFKS 174 (385)
T ss_dssp --CSCTTST--------HHHHHHHHH-------------------HHCSEEEESSHH-----HHHHHHHTTCCGGGEEEC
T ss_pred --cccccCc--------HHHHHHHHH-------------------hhhceeecCCHH-----HHHHHHHcCCCcCcEEEE
Confidence 00 0011 000011100 113334433311 1111111 11 2357777
Q ss_pred ccCCCCCCCC---CcchhhhccccCCCCCCeEEEEEeCCcccCC-HHHHHHHHHHHHhc----CCCeEEEEcCCCCCCCc
Q 037721 244 GPLVNPEPPS---GELEERWAKWLCKYPPKSVIYCSFGSETFLT-VDQIKELAIGLEIT----GLPFFLVLNFPPNVDGQ 315 (465)
Q Consensus 244 Gp~~~~~~~~---~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~-~~~~~~i~~al~~~----~~~~i~~~~~~~~~~~~ 315 (465)
|-.....-.. .....++.+.++-.+ ++.++++.|.....+ .+.+..+++++... +.++++........
T Consensus 175 Gnp~~D~~~~~~~~~~~~~~~~~lgl~~-~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~~~~--- 250 (385)
T 4hwg_A 175 GSHMPEVLDRFMPKILKSDILDKLSLTP-KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPRTKK--- 250 (385)
T ss_dssp CCSHHHHHHHHHHHHHHCCHHHHTTCCT-TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHHHHH---
T ss_pred CCchHHHHHHhhhhcchhHHHHHcCCCc-CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChHHHH---
Confidence 7320100000 001112222333222 558899888754333 24566677766532 66777765421000
Q ss_pred ccccccCChhhhhhcCCCceEEecccc---hHhhhccccceeecccCChhhHHHHHHhCCceeeccccccchhhHHHHhh
Q 037721 316 SELVRTLPPGFMDRVKDRGVVHTGWVQ---QQLILRHESVGCYVCHSGFSSVTEAVISDCQLVLLPLKGDQFLNSKLVAG 392 (465)
Q Consensus 316 ~~~~~~lp~~~~~~~~~~nv~~~~~~p---q~~vL~~~~~~~~ItHgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~v~~ 392 (465)
..... .++. ....++.+.+.++ ...+++++++ +||-.|. .+.||.+.|+|+|+++-..+.+. ..+
T Consensus 251 --~l~~~-~~~~--~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e----~v~ 318 (385)
T 4hwg_A 251 --RLEDL-EGFK--ELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE----GMD 318 (385)
T ss_dssp --HHHTS-GGGG--GTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH----HHH
T ss_pred --HHHHH-HHHh--cCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh----hhh
Confidence 00000 0000 0124788766554 4578889898 9999886 46999999999999986544222 256
Q ss_pred hhcceEEeeecCCCCccCHHHHHHHHHHhhc
Q 037721 393 DLKAGVEVNRRDHDGHFGKEDIFKAVKTVMV 423 (465)
Q Consensus 393 ~~G~G~~l~~~~~~~~~~~~~l~~ai~~ll~ 423 (465)
. |.++.+. .++++|.+++.++++
T Consensus 319 ~-G~~~lv~-------~d~~~i~~ai~~ll~ 341 (385)
T 4hwg_A 319 A-GTLIMSG-------FKAERVLQAVKTITE 341 (385)
T ss_dssp H-TCCEECC-------SSHHHHHHHHHHHHT
T ss_pred c-CceEEcC-------CCHHHHHHHHHHHHh
Confidence 6 8776654 378999999999998
No 40
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.64 E-value=1.1e-06 Score=88.73 Aligned_cols=163 Identities=12% Similarity=0.063 Sum_probs=91.8
Q ss_pred EEEEEeCCccc-CCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhhhhhcCCCceE-EecccchH--hhh
Q 037721 272 VIYCSFGSETF-LTVDQIKELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVKDRGVV-HTGWVQQQ--LIL 347 (465)
Q Consensus 272 ~v~vs~GS~~~-~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~-~~~~~pq~--~vL 347 (465)
.+++..|.... .+.+.+.+.+..+...+++++++ |.+... ....+ ..+..+. +.++. +.++.... +++
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~iv-G~g~~~-----~~~~l-~~~~~~~-~~~v~~~~g~~~~~~~~~~ 363 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVL-GAGDVA-----LEGAL-LAAASRH-HGRVGVAIGYNEPLSHLMQ 363 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEE-ECBCHH-----HHHHH-HHHHHHT-TTTEEEEESCCHHHHHHHH
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEEEE-eCCchH-----HHHHH-HHHHHhC-CCcEEEecCCCHHHHHHHH
Confidence 46777888753 33455555555554446665555 332100 00000 0111111 24776 67884432 578
Q ss_pred ccccceeecc----cCChhhHHHHHHhCCceeeccccccchhhHHHHhh---------hhcceEEeeecCCCCccCHHHH
Q 037721 348 RHESVGCYVC----HSGFSSVTEAVISDCQLVLLPLKGDQFLNSKLVAG---------DLKAGVEVNRRDHDGHFGKEDI 414 (465)
Q Consensus 348 ~~~~~~~~It----HgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~v~~---------~~G~G~~l~~~~~~~~~~~~~l 414 (465)
..+++ +|. -|...+++||+++|+|+|+... ......+.+ . +.|+.++. -+.+++
T Consensus 364 ~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~~~~~~~~~~~~-~~G~l~~~------~d~~~l 430 (485)
T 1rzu_A 364 AGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVIDANHAALASKA-ATGVQFSP------VTLDGL 430 (485)
T ss_dssp HHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCBCCHHHHHTTC-CCBEEESS------CSHHHH
T ss_pred hcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheecccccccccccC-CcceEeCC------CCHHHH
Confidence 88888 663 2335689999999999999654 333444432 1 36777765 388999
Q ss_pred HHHHHHhh---cccCCcchHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHh
Q 037721 415 FKAVKTVM---VDVNKEPGASIRANQKWWREFLLNGQIQDKFIADFVKDLKA 463 (465)
Q Consensus 415 ~~ai~~ll---~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~l~~ 463 (465)
.++|.+++ + +++.++++.+-+. ++.-+-+..++.+++..++
T Consensus 431 a~~i~~ll~~~~------~~~~~~~~~~~~~--~~~fs~~~~~~~~~~~y~~ 474 (485)
T 1rzu_A 431 KQAIRRTVRYYH------DPKLWTQMQKLGM--KSDVSWEKSAGLYAALYSQ 474 (485)
T ss_dssp HHHHHHHHHHHT------CHHHHHHHHHHHH--TCCCBHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC------CHHHHHHHHHHHH--HHhCChHHHHHHHHHHHHH
Confidence 99999999 6 5555443332221 1233444555666655544
No 41
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.62 E-value=2.8e-06 Score=90.24 Aligned_cols=78 Identities=10% Similarity=0.078 Sum_probs=56.0
Q ss_pred CCceEEec----ccchHhhhc----cccceeeccc----CChhhHHHHHHhCCceeeccccccchhhHHHHhhhhcceEE
Q 037721 332 DRGVVHTG----WVQQQLILR----HESVGCYVCH----SGFSSVTEAVISDCQLVLLPLKGDQFLNSKLVAGDLKAGVE 399 (465)
Q Consensus 332 ~~nv~~~~----~~pq~~vL~----~~~~~~~ItH----gG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~ 399 (465)
..+|.+.+ ++++.++.. .+++ ||.- |-..+++||+++|+|+|+- |.......+.+. +.|+.
T Consensus 639 ~~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~dg-~~Gll 711 (816)
T 3s28_A 639 NGQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVHG-KSGFH 711 (816)
T ss_dssp BBBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCBT-TTBEE
T ss_pred CCcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHccC-CcEEE
Confidence 35788887 445565554 3455 6632 3346999999999999995 555566677666 78888
Q ss_pred eeecCCCCccCHHHHHHHHHHhh
Q 037721 400 VNRRDHDGHFGKEDIFKAVKTVM 422 (465)
Q Consensus 400 l~~~~~~~~~~~~~l~~ai~~ll 422 (465)
++.. +.+++.++|.+++
T Consensus 712 v~p~------D~e~LA~aI~~lL 728 (816)
T 3s28_A 712 IDPY------HGDQAADTLADFF 728 (816)
T ss_dssp ECTT------SHHHHHHHHHHHH
T ss_pred eCCC------CHHHHHHHHHHHH
Confidence 8763 8899999997766
No 42
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.57 E-value=5.5e-06 Score=83.59 Aligned_cols=162 Identities=11% Similarity=-0.002 Sum_probs=90.8
Q ss_pred EEEEEeCCccc-CCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhhhhhc--CCCceE-Eecccch--Hh
Q 037721 272 VIYCSFGSETF-LTVDQIKELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRV--KDRGVV-HTGWVQQ--QL 345 (465)
Q Consensus 272 ~v~vs~GS~~~-~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~--~~~nv~-~~~~~pq--~~ 345 (465)
.+++..|.... .+.+.+.+.+..+...+++++++-.+. . ..-+.+.+.. .+.++. +.++... .+
T Consensus 293 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~-~---------~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~ 362 (485)
T 2qzs_A 293 PLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGD-P---------VLQEGFLAAAAEYPGQVGVQIGYHEAFSHR 362 (485)
T ss_dssp CEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEEC-H---------HHHHHHHHHHHHSTTTEEEEESCCHHHHHH
T ss_pred eEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCc-h---------HHHHHHHHHHHhCCCcEEEeCCCCHHHHHH
Confidence 45566676543 444555555555544466665553221 0 0001111111 124775 7788443 26
Q ss_pred hhccccceeecc----cCChhhHHHHHHhCCceeeccccccchhhHHHHhhhh--------cceEEeeecCCCCccCHHH
Q 037721 346 ILRHESVGCYVC----HSGFSSVTEAVISDCQLVLLPLKGDQFLNSKLVAGDL--------KAGVEVNRRDHDGHFGKED 413 (465)
Q Consensus 346 vL~~~~~~~~It----HgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~--------G~G~~l~~~~~~~~~~~~~ 413 (465)
++..+++ +|. -|...+++||+++|+|+|+... ......+.+.. +.|..++. -+.++
T Consensus 363 ~~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~~~~~~~~~~~~~G~l~~~------~d~~~ 430 (485)
T 2qzs_A 363 IMGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSDCSLENLADGVASGFVFED------SNAWS 430 (485)
T ss_dssp HHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCBCCHHHHHTTCCCBEEECS------SSHHH
T ss_pred HHHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceeccCccccccccccceEEECC------CCHHH
Confidence 7888888 663 2334689999999999999754 33444444210 36777765 38999
Q ss_pred HHHHHHHhh---cccCCcchHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHh
Q 037721 414 IFKAVKTVM---VDVNKEPGASIRANQKWWREFLLNGQIQDKFIADFVKDLKA 463 (465)
Q Consensus 414 l~~ai~~ll---~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~l~~ 463 (465)
+.++|.+++ + +++.++++.+-+. ++.-+-+..++.+++.+++
T Consensus 431 la~~i~~ll~~~~------~~~~~~~~~~~~~--~~~fs~~~~~~~~~~ly~~ 475 (485)
T 2qzs_A 431 LLRAIRRAFVLWS------RPSLWRFVQRQAM--AMDFSWQVAAKSYRELYYR 475 (485)
T ss_dssp HHHHHHHHHHHHT------SHHHHHHHHHHHH--HCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcC------CHHHHHHHHHHHH--hhcCCHHHHHHHHHHHHHH
Confidence 999999999 6 5555544333222 1333445555666555443
No 43
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.46 E-value=2.9e-05 Score=76.40 Aligned_cols=110 Identities=13% Similarity=0.114 Sum_probs=71.4
Q ss_pred eEEecccchH---hhhccccceeecc----cCChhhHHHHHHhCCceeeccccccchhhHHHHhhhhcc-----------
Q 037721 335 VVHTGWVQQQ---LILRHESVGCYVC----HSGFSSVTEAVISDCQLVLLPLKGDQFLNSKLVAGDLKA----------- 396 (465)
Q Consensus 335 v~~~~~~pq~---~vL~~~~~~~~It----HgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~----------- 396 (465)
+.+.+|+++. +++..+++ +|. -|...+++||+++|+|+|+... ......+.+. ..
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~-~~~~i~~~~~~~~ 328 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAV----GGADDYFSGD-CVYKIKPSAWISV 328 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECC----HHHHHHSCTT-TSEEECCCEEEEC
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCC----CChHHHHccC-ccccccccccccc
Confidence 7788999854 46777887 653 2334689999999999999553 3444444432 22
Q ss_pred ----eE--EeeecCCCCccCHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHH-HcCCchHHHHHHHHHHHHhh
Q 037721 397 ----GV--EVNRRDHDGHFGKEDIFKAVKTVMVDVNKEPGASIRANQKWWREFL-LNGQIQDKFIADFVKDLKAL 464 (465)
Q Consensus 397 ----G~--~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~a~~l~~~~-~~~~~~~~~~~~~~~~l~~~ 464 (465)
|+ .++. -+.+++.++| ++++ +++.+++..+-+... ++.-+.+..++.+++.++++
T Consensus 329 ~~~~G~~gl~~~------~d~~~la~~i-~l~~------~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~ 390 (413)
T 3oy2_A 329 DDRDGIGGIEGI------IDVDDLVEAF-TFFK------DEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSL 390 (413)
T ss_dssp TTTCSSCCEEEE------CCHHHHHHHH-HHTT------SHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHH
T ss_pred ccccCcceeeCC------CCHHHHHHHH-HHhc------CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 55 5655 3899999999 9998 666655444433333 33445555666666655543
No 44
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.44 E-value=0.0005 Score=70.60 Aligned_cols=114 Identities=11% Similarity=0.084 Sum_probs=72.6
Q ss_pred CceEEecccchH---hhhccccceeec---ccCChhhHHHHHHhCCceeeccccc-cchhhHHHHhhhhcceEEeeecCC
Q 037721 333 RGVVHTGWVQQQ---LILRHESVGCYV---CHSGFSSVTEAVISDCQLVLLPLKG-DQFLNSKLVAGDLKAGVEVNRRDH 405 (465)
Q Consensus 333 ~nv~~~~~~pq~---~vL~~~~~~~~I---tHgG~~s~~Eal~~GvP~l~~P~~~-DQ~~na~~v~~~~G~G~~l~~~~~ 405 (465)
.+|.+.+++|+. +++..+++ || ..|+.++++||+++|+|+|++|-.. --..-+..+... |+.-.+.
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~-g~~e~v~---- 506 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHL-GLDEMNV---- 506 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHH-TCGGGBC----
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHC-CChhhhc----
Confidence 589999999754 56778888 65 2266689999999999999987421 111223445555 6654443
Q ss_pred CCccCHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHHH---cCCchHHHHHHHHHHHH
Q 037721 406 DGHFGKEDIFKAVKTVMVDVNKEPGASIRANQKWWREFLL---NGQIQDKFIADFVKDLK 462 (465)
Q Consensus 406 ~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~a~~l~~~~~---~~~~~~~~~~~~~~~l~ 462 (465)
-+.+++.+++.++++ |++.+++..+-+.... +.-+.+..++.+.+.++
T Consensus 507 ---~~~~~la~~i~~l~~------~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~ 557 (568)
T 2vsy_A 507 ---ADDAAFVAKAVALAS------DPAALTALHARVDVLRRASGVFHMDGFADDFGALLQ 557 (568)
T ss_dssp ---SSHHHHHHHHHHHHH------CHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHhc------CHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHH
Confidence 278999999999998 6666555443333222 33344444555544443
No 45
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.38 E-value=1.6e-06 Score=74.96 Aligned_cols=127 Identities=16% Similarity=0.131 Sum_probs=82.5
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHHhc-CCCeEEEEcCCCCCCCcccccccCChhhhh--h-cCCCceEEecccch---H
Q 037721 272 VIYCSFGSETFLTVDQIKELAIGLEIT-GLPFFLVLNFPPNVDGQSELVRTLPPGFMD--R-VKDRGVVHTGWVQQ---Q 344 (465)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~i~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~--~-~~~~nv~~~~~~pq---~ 344 (465)
.+++..|+... ...+..++++++.. +++++++ +.+...+ .+ ..+.. . --..|+.+.+|+++ .
T Consensus 24 ~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~-G~~~~~~-------~l-~~~~~~~~~~l~~~v~~~g~~~~~e~~ 92 (177)
T 2f9f_A 24 DFWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIV-GWFSKGD-------HA-ERYARKIMKIAPDNVKFLGSVSEEELI 92 (177)
T ss_dssp SCEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEE-BCCCTTS-------TH-HHHHHHHHHHSCTTEEEEESCCHHHHH
T ss_pred CEEEEEecccc--ccCHHHHHHHHHhCCCcEEEEE-ecCccHH-------HH-HHHHHhhhcccCCcEEEeCCCCHHHHH
Confidence 34556677652 23344556666554 5666555 4332110 11 01111 1 12348999999997 5
Q ss_pred hhhccccceeecc---cCCh-hhHHHHHHhCCceeeccccccchhhHHHHhhhhcceEEeeecCCCCccCHHHHHHHHHH
Q 037721 345 LILRHESVGCYVC---HSGF-SSVTEAVISDCQLVLLPLKGDQFLNSKLVAGDLKAGVEVNRRDHDGHFGKEDIFKAVKT 420 (465)
Q Consensus 345 ~vL~~~~~~~~It---HgG~-~s~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~ 420 (465)
+++..+++ +|. +.|+ .+++||+++|+|+|+.. ...+...+++. +.|+.+ . .+.+++.++|.+
T Consensus 93 ~~~~~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~----~~~~~e~i~~~-~~g~~~-~------~d~~~l~~~i~~ 158 (177)
T 2f9f_A 93 DLYSRCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVN----EGGFKETVINE-KTGYLV-N------ADVNEIIDAMKK 158 (177)
T ss_dssp HHHHHCSE--EEECCSSCCSCHHHHHHHHTTCCEEEES----SHHHHHHCCBT-TTEEEE-C------SCHHHHHHHHHH
T ss_pred HHHHhCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeC----CCCHHHHhcCC-CccEEe-C------CCHHHHHHHHHH
Confidence 67888888 665 3344 59999999999999964 45666677766 788888 4 489999999999
Q ss_pred hhc
Q 037721 421 VMV 423 (465)
Q Consensus 421 ll~ 423 (465)
+++
T Consensus 159 l~~ 161 (177)
T 2f9f_A 159 VSK 161 (177)
T ss_dssp HHH
T ss_pred HHh
Confidence 998
No 46
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.29 E-value=7.7e-05 Score=73.42 Aligned_cols=72 Identities=10% Similarity=0.085 Sum_probs=55.9
Q ss_pred CceEEecccchH---hhhccccceeecc---cCC-hhhHHHHH-------HhCCceeeccccccchhhHHHHhhhhcceE
Q 037721 333 RGVVHTGWVQQQ---LILRHESVGCYVC---HSG-FSSVTEAV-------ISDCQLVLLPLKGDQFLNSKLVAGDLKAGV 398 (465)
Q Consensus 333 ~nv~~~~~~pq~---~vL~~~~~~~~It---HgG-~~s~~Eal-------~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~ 398 (465)
.+|.+.+++|+. +++..+++ +|. +-| .++++||+ ++|+|+|+-.. +.+. ..|.
T Consensus 265 ~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G~ 331 (406)
T 2hy7_A 265 DNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKSR 331 (406)
T ss_dssp TTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSSE
T ss_pred CCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cceE
Confidence 489999999865 46777888 653 334 46789999 99999999755 5555 6687
Q ss_pred E-eeecCCCCccCHHHHHHHHHHhhc
Q 037721 399 E-VNRRDHDGHFGKEDIFKAVKTVMV 423 (465)
Q Consensus 399 ~-l~~~~~~~~~~~~~l~~ai~~ll~ 423 (465)
. ++.. +.+++.++|.++++
T Consensus 332 l~v~~~------d~~~la~ai~~ll~ 351 (406)
T 2hy7_A 332 FGYTPG------NADSVIAAITQALE 351 (406)
T ss_dssp EEECTT------CHHHHHHHHHHHHH
T ss_pred EEeCCC------CHHHHHHHHHHHHh
Confidence 7 6653 89999999999998
No 47
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.16 E-value=0.00023 Score=69.17 Aligned_cols=96 Identities=8% Similarity=0.120 Sum_probs=67.1
Q ss_pred ceEEecccch-Hhhhccccceeecc-----cCChhhHHHHHHhCCceeeccccccchhhHHHHhhhhcceEEeeecCCCC
Q 037721 334 GVVHTGWVQQ-QLILRHESVGCYVC-----HSGFSSVTEAVISDCQLVLLPLKGDQFLNSKLVAGDLKAGVEVNRRDHDG 407 (465)
Q Consensus 334 nv~~~~~~pq-~~vL~~~~~~~~It-----HgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 407 (465)
++.+.++..+ ..+++.+++ ++. -+|..+++||+++|+|+|+-|..++.......+.+. |.++.+ .
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~--~---- 331 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEV--K---- 331 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEEC--C----
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEe--C----
Confidence 5666665443 567888887 553 134478999999999999877767766666666566 877554 2
Q ss_pred ccCHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHH
Q 037721 408 HFGKEDIFKAVKTVMVDVNKEPGASIRANQKWWREF 443 (465)
Q Consensus 408 ~~~~~~l~~ai~~ll~~~~~~~~~~~~~~a~~l~~~ 443 (465)
+.+++.++|.++++ + +.-.+|.+++++..+.
T Consensus 332 --d~~~La~ai~~ll~--d-~~r~~mg~~ar~~~~~ 362 (374)
T 2xci_A 332 --NETELVTKLTELLS--V-KKEIKVEEKSREIKGC 362 (374)
T ss_dssp --SHHHHHHHHHHHHH--S-CCCCCHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHh--H-HHHHHHHHHHHHHHHh
Confidence 67999999999998 1 3334566666665544
No 48
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=97.90 E-value=0.0016 Score=66.42 Aligned_cols=135 Identities=10% Similarity=-0.037 Sum_probs=75.1
Q ss_pred EEEEEeCCccc-CCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhhhh--hcCCCceEEecccchH---h
Q 037721 272 VIYCSFGSETF-LTVDQIKELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMD--RVKDRGVVHTGWVQQQ---L 345 (465)
Q Consensus 272 ~v~vs~GS~~~-~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~--~~~~~nv~~~~~~pq~---~ 345 (465)
.+++..|.... .+.+.+.+.+..+...+.++++...+. . .....+.. .....++.+..+.+.. .
T Consensus 328 p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~-~---------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 397 (536)
T 3vue_A 328 PLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGK-K---------KFEKLLKSMEEKYPGKVRAVVKFNAPLAHL 397 (536)
T ss_dssp CEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBC-H---------HHHHHHHHHHHHSTTTEEEECSCCHHHHHH
T ss_pred cEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccC-c---------hHHHHHHHHHhhcCCceEEEEeccHHHHHH
Confidence 45566677653 344555555555545566665553322 1 00011111 1123467776776653 4
Q ss_pred hhccccceeeccc---CCh-hhHHHHHHhCCceeeccccccchhhHHHHhhhhcceEEeeecCCCC----ccCHHHHHHH
Q 037721 346 ILRHESVGCYVCH---SGF-SSVTEAVISDCQLVLLPLKGDQFLNSKLVAGDLKAGVEVNRRDHDG----HFGKEDIFKA 417 (465)
Q Consensus 346 vL~~~~~~~~ItH---gG~-~s~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~----~~~~~~l~~a 417 (465)
+++.+++ ||.= =|+ .+++||+++|+|+|+-. .......|.+. .-|........++ ..+.+++.++
T Consensus 398 ~~~~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~----~gG~~e~V~dg-~~G~~~~~~~~~g~l~~~~d~~~la~a 470 (536)
T 3vue_A 398 IMAGADV--LAVPSRFEPCGLIQLQGMRYGTPCACAS----TGGLVDTVIEG-KTGFHMGRLSVDCKVVEPSDVKKVAAT 470 (536)
T ss_dssp HHHHCSE--EEECCSCCSSCSHHHHHHHTTCCEEECS----CTHHHHHCCBT-TTEEECCCCCSCTTCCCHHHHHHHHHH
T ss_pred HHHhhhe--eecccccCCCCHHHHHHHHcCCCEEEcC----CCCchheeeCC-CCccccccCCCceeEECCCCHHHHHHH
Confidence 6777777 6642 133 58999999999999954 34455555554 4555433211000 1367889999
Q ss_pred HHHhhc
Q 037721 418 VKTVMV 423 (465)
Q Consensus 418 i~~ll~ 423 (465)
|++++.
T Consensus 471 i~ral~ 476 (536)
T 3vue_A 471 LKRAIK 476 (536)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988775
No 49
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.51 E-value=0.0017 Score=68.58 Aligned_cols=139 Identities=9% Similarity=0.111 Sum_probs=90.0
Q ss_pred CCeEEEEEeCCcccCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhhhh-hcCCCceEEecccchHh--
Q 037721 269 PKSVIYCSFGSETFLTVDQIKELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMD-RVKDRGVVHTGWVQQQL-- 345 (465)
Q Consensus 269 ~~~~v~vs~GS~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~-~~~~~nv~~~~~~pq~~-- 345 (465)
++.++|.||-+....+++.+..-++-|++.+-.++|........ ...+-..+.. ......+++....|..+
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~------~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l 594 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVG------EPNIQQYAQNMGLPQNRIIFSPVAPKEEHV 594 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGG------HHHHHHHHHHTTCCGGGEEEEECCCHHHHH
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHH------HHHHHHHHHhcCCCcCeEEECCCCCHHHHH
Confidence 35599999999999999999998888888888888887654211 1111111111 12334688888888654
Q ss_pred -hhccccceeec---ccCChhhHHHHHHhCCceeeccccc-cchhhHHHHhhhhcceEEeeecCCCCccCHHHHHHHHHH
Q 037721 346 -ILRHESVGCYV---CHSGFSSVTEAVISDCQLVLLPLKG-DQFLNSKLVAGDLKAGVEVNRRDHDGHFGKEDIFKAVKT 420 (465)
Q Consensus 346 -vL~~~~~~~~I---tHgG~~s~~Eal~~GvP~l~~P~~~-DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~ 420 (465)
.+...|+ ++ -.+|++|++|||+.|||+|++|-.. =...-+-.+... |+.-.+-. +.++-.+.-.+
T Consensus 595 ~~~~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~-gl~e~ia~-------~~~~Y~~~a~~ 664 (723)
T 4gyw_A 595 RRGQLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCL-GCLELIAK-------NRQEYEDIAVK 664 (723)
T ss_dssp HHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHH-TCGGGBCS-------SHHHHHHHHHH
T ss_pred HHhCCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHc-CCcccccC-------CHHHHHHHHHH
Confidence 4445555 74 4889999999999999999999422 222333344444 77654432 55555555445
Q ss_pred hhc
Q 037721 421 VMV 423 (465)
Q Consensus 421 ll~ 423 (465)
+-+
T Consensus 665 la~ 667 (723)
T 4gyw_A 665 LGT 667 (723)
T ss_dssp HHH
T ss_pred Hhc
Confidence 555
No 50
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.47 E-value=0.0021 Score=55.92 Aligned_cols=76 Identities=11% Similarity=0.029 Sum_probs=58.1
Q ss_pred ceEE-ecccchH---hhhccccceeecccC---C-hhhHHHHHHhCCceeeccccccchhhHHHHhhhhcceEEeeecCC
Q 037721 334 GVVH-TGWVQQQ---LILRHESVGCYVCHS---G-FSSVTEAVISDCQLVLLPLKGDQFLNSKLVAGDLKAGVEVNRRDH 405 (465)
Q Consensus 334 nv~~-~~~~pq~---~vL~~~~~~~~ItHg---G-~~s~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 405 (465)
++.+ .+|+++. .++..+++ +|.-. | ..+++||+++|+|+|+... ......+ .. +.|..++.
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~~-~~g~~~~~--- 164 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILVKA--- 164 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-CT-TTCEEECT---
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-CC-CceEEecC---
Confidence 8888 9999854 57778888 66422 3 4689999999999999653 4455556 55 77887775
Q ss_pred CCccCHHHHHHHHHHhhc
Q 037721 406 DGHFGKEDIFKAVKTVMV 423 (465)
Q Consensus 406 ~~~~~~~~l~~ai~~ll~ 423 (465)
-+.+++.++|.++++
T Consensus 165 ---~~~~~l~~~i~~l~~ 179 (200)
T 2bfw_A 165 ---GDPGELANAILKALE 179 (200)
T ss_dssp ---TCHHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHHh
Confidence 389999999999986
No 51
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.34 E-value=0.00078 Score=64.30 Aligned_cols=110 Identities=14% Similarity=0.176 Sum_probs=81.8
Q ss_pred ceEEecccchHhhh---ccccceeecccCCh---------hhHHHHHHhCCceeeccccccchhhHHHHhhhhcceEEee
Q 037721 334 GVVHTGWVQQQLIL---RHESVGCYVCHSGF---------SSVTEAVISDCQLVLLPLKGDQFLNSKLVAGDLKAGVEVN 401 (465)
Q Consensus 334 nv~~~~~~pq~~vL---~~~~~~~~ItHgG~---------~s~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~ 401 (465)
|+.+.+|+|+.++. ..++.+++.+-+.+ +-+.|++++|+|+|+.+ ...++..+++. |+|+.++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~-~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENN-GLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHH-TCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhC-CeEEEeC
Confidence 89999999987764 34566556533333 35789999999999854 56788899999 9999875
Q ss_pred ecCCCCccCHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHHHcCCchHHHHHHHHHH
Q 037721 402 RRDHDGHFGKEDIFKAVKTVMVDVNKEPGASIRANQKWWREFLLNGQIQDKFIADFVKD 460 (465)
Q Consensus 402 ~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~ 460 (465)
+.+++.+++..+.. ++-.+|++|+++.+++++++--..+++.+.+.+
T Consensus 290 --------~~~e~~~~i~~l~~----~~~~~m~~na~~~a~~~~~~~f~k~~l~~~~~~ 336 (339)
T 3rhz_A 290 --------DVEEAIMKVKNVNE----DEYIELVKNVRSFNPILRKGFFTRRLLTESVFQ 336 (339)
T ss_dssp --------SHHHHHHHHHHCCH----HHHHHHHHHHHHHTHHHHTTHHHHHHHHHHHHH
T ss_pred --------CHHHHHHHHHHhCH----HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Confidence 35788888888653 234789999999999998765556666555544
No 52
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.33 E-value=0.0011 Score=55.80 Aligned_cols=75 Identities=13% Similarity=0.160 Sum_probs=49.9
Q ss_pred ceEEecccchH---hhhccccceeecc----cCChhhHHHHHHhCC-ceeeccccccchhhHHHHhhhhcceEEeeecCC
Q 037721 334 GVVHTGWVQQQ---LILRHESVGCYVC----HSGFSSVTEAVISDC-QLVLLPLKGDQFLNSKLVAGDLKAGVEVNRRDH 405 (465)
Q Consensus 334 nv~~~~~~pq~---~vL~~~~~~~~It----HgG~~s~~Eal~~Gv-P~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 405 (465)
++.+ +|+|+. +++..+++ +|. -|...+++||+++|+ |+|+..-.+ .....+.+. +. .+..
T Consensus 57 ~v~~-g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~---~~~~~~~~~-~~--~~~~--- 124 (166)
T 3qhp_A 57 KAEF-GFVNSNELLEILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLS---ATRQFALDE-RS--LFEP--- 124 (166)
T ss_dssp EEEC-CCCCHHHHHHHHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTC---GGGGGCSSG-GG--EECT---
T ss_pred eEEE-eecCHHHHHHHHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCC---chhhhccCC-ce--EEcC---
Confidence 7777 998864 46777787 664 233469999999996 999933211 111222222 33 3333
Q ss_pred CCccCHHHHHHHHHHhhc
Q 037721 406 DGHFGKEDIFKAVKTVMV 423 (465)
Q Consensus 406 ~~~~~~~~l~~ai~~ll~ 423 (465)
-+.+++.++|.++++
T Consensus 125 ---~~~~~l~~~i~~l~~ 139 (166)
T 3qhp_A 125 ---NNAKDLSAKIDWWLE 139 (166)
T ss_dssp ---TCHHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHHh
Confidence 489999999999998
No 53
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.29 E-value=0.0024 Score=65.06 Aligned_cols=146 Identities=8% Similarity=-0.041 Sum_probs=90.2
Q ss_pred CeEEEEEeCCcccCCHHHHHHHHHHHHhcCCCeEEE--EcCCCCCCCcccccccCChhhhh-hcCCCceEEecccchHhh
Q 037721 270 KSVIYCSFGSETFLTVDQIKELAIGLEITGLPFFLV--LNFPPNVDGQSELVRTLPPGFMD-RVKDRGVVHTGWVQQQLI 346 (465)
Q Consensus 270 ~~~v~vs~GS~~~~~~~~~~~i~~al~~~~~~~i~~--~~~~~~~~~~~~~~~~lp~~~~~-~~~~~nv~~~~~~pq~~v 346 (465)
..++|.+|++.....++.+....+-++..+-.++|. .+..... ...+-..+.. ... ..+.+.+.+|+.+.
T Consensus 440 G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~------~~~~~~~~~~~GI~-~Rv~F~g~~p~~e~ 512 (631)
T 3q3e_A 440 EVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGI------THPYVERFIKSYLG-DSATAHPHSPYHQY 512 (631)
T ss_dssp SEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGG------GHHHHHHHHHHHHG-GGEEEECCCCHHHH
T ss_pred CeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchh------hHHHHHHHHHcCCC-ccEEEcCCCCHHHH
Confidence 368999999988888888888888887777666664 3321100 0000011111 111 36778888887654
Q ss_pred h---ccccceeec---ccCChhhHHHHHHhCCceeeccccc-cchhhHHHHhhhhcceEEeeecCCCCccCHHHHHHHHH
Q 037721 347 L---RHESVGCYV---CHSGFSSVTEAVISDCQLVLLPLKG-DQFLNSKLVAGDLKAGVEVNRRDHDGHFGKEDIFKAVK 419 (465)
Q Consensus 347 L---~~~~~~~~I---tHgG~~s~~Eal~~GvP~l~~P~~~-DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~ 419 (465)
+ ..+|+ |+ ..+|.+|++||+++|||+|+++-.. -...-+..+... |+.-.+-. -+.++..+...
T Consensus 513 la~y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~-GLpE~LIA------~d~eeYv~~Av 583 (631)
T 3q3e_A 513 LRILHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRL-GLPEWLIA------NTVDEYVERAV 583 (631)
T ss_dssp HHHHHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHT-TCCGGGEE------SSHHHHHHHHH
T ss_pred HHHHhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhc-CCCcceec------CCHHHHHHHHH
Confidence 4 66666 53 3478899999999999999988422 111222233444 66542222 36788888888
Q ss_pred HhhcccCCcchHHHHHHH
Q 037721 420 TVMVDVNKEPGASIRANQ 437 (465)
Q Consensus 420 ~ll~~~~~~~~~~~~~~a 437 (465)
++.+ |++.+++.
T Consensus 584 ~La~------D~~~l~~L 595 (631)
T 3q3e_A 584 RLAE------NHQERLEL 595 (631)
T ss_dssp HHHH------CHHHHHHH
T ss_pred HHhC------CHHHHHHH
Confidence 8888 66555443
No 54
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=96.82 E-value=0.03 Score=53.54 Aligned_cols=106 Identities=9% Similarity=0.073 Sum_probs=71.2
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCCChhhhhcccCCCCCee-EEEccCCCCCCCCCCCCCCC
Q 037721 8 ADQLHVVMFPWFAFGHISPFVQLSNKLSLH--GVKVSFFSAPGNIPRIKSSLNLTPMAD-IIPLQIPHVDGLPPGLDSTS 84 (465)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~V~~~~~~~~~~~i~~~g~~~~~~~-~~~l~~~~~~~~~~~~~~~~ 84 (465)
-+..+|+++-..+.|++.-..++.++|+++ +.+|++++.+.+.+.++.. +.++ ++.++ . ..
T Consensus 6 l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~----p~vd~vi~~~----~---~~----- 69 (349)
T 3tov_A 6 LDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYN----PNIDELIVVD----K---KG----- 69 (349)
T ss_dssp CTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSC----TTCSEEEEEC----C---SS-----
T ss_pred CCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC----CCccEEEEeC----c---cc-----
Confidence 445789999999999999999999999886 9999999999888777643 2343 55553 0 00
Q ss_pred CCchHHHHHHHHHHHhhHHHHHHHHhhcCC-cEEEEcCCCcccccccccccCCeeEE
Q 037721 85 EMTPHMAELLKQALDLMQPQIKTLLSQLKP-HFVFFDFTHYWLPGLVGSQLGIKTVN 140 (465)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~p-D~vi~D~~~~~~~~~~A~~~giP~v~ 140 (465)
. . ..+.. ...+...+++.++ |++|.=....-...+ +...|+|..+
T Consensus 70 --~--~-~~~~~-----~~~l~~~Lr~~~y~D~vidl~~~~rs~~l-~~~~~a~~ri 115 (349)
T 3tov_A 70 --R--H-NSISG-----LNEVAREINAKGKTDIVINLHPNERTSYL-AWKIHAPITT 115 (349)
T ss_dssp --H--H-HHHHH-----HHHHHHHHHHHCCCCEEEECCCSHHHHHH-HHHHCCSEEE
T ss_pred --c--c-ccHHH-----HHHHHHHHhhCCCCeEEEECCCChHHHHH-HHHhCCCeEE
Confidence 0 0 00111 1234455677789 999864433334455 7778888654
No 55
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=96.71 E-value=0.025 Score=53.81 Aligned_cols=102 Identities=11% Similarity=0.123 Sum_probs=66.1
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCCChhhhhcccCCCCCe-eEEEccCCCCCCCCCCCCCCCCCc
Q 037721 11 LHVVMFPWFAFGHISPFVQLSNKLSLH--GVKVSFFSAPGNIPRIKSSLNLTPMA-DIIPLQIPHVDGLPPGLDSTSEMT 87 (465)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~V~~~~~~~~~~~i~~~g~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~ 87 (465)
+||+++.....|++.-...+.++|+++ +.+|++++.+.+.+.++.. +.+ +++.++. ... .
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~----p~i~~v~~~~~------~~~-------~ 63 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRM----PEVNEAIPMPL------GHG-------A 63 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTC----TTEEEEEEC-------------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC----CccCEEEEecC------Ccc-------c
Confidence 379999999999999999999999886 9999999998777766543 223 3444430 000 0
Q ss_pred hHHHHHHHHHHHhhHHHHHHHHhhcCCcEEEEcCCC-cccccccccccCCeeEE
Q 037721 88 PHMAELLKQALDLMQPQIKTLLSQLKPHFVFFDFTH-YWLPGLVGSQLGIKTVN 140 (465)
Q Consensus 88 ~~~~~~~~~~~~~~~~~l~~~l~~~~pD~vi~D~~~-~~~~~~~A~~~giP~v~ 140 (465)
. .+. ....+.+.+++.++|+|| |... .....+ +...|+|..+
T Consensus 64 ~----~~~-----~~~~l~~~l~~~~~D~vi-d~~~~~~sa~~-~~~~~~~~~i 106 (348)
T 1psw_A 64 L----EIG-----ERRKLGHSLREKRYDRAY-VLPNSFKSALV-PLFAGIPHRT 106 (348)
T ss_dssp -----CHH-----HHHHHHHHTTTTTCSEEE-ECSCCSGGGHH-HHHTTCSEEE
T ss_pred c----chH-----HHHHHHHHHHhcCCCEEE-ECCCChHHHHH-HHHhCCCEEe
Confidence 0 000 113455667778999988 4322 333455 7777888743
No 56
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=95.93 E-value=0.047 Score=53.47 Aligned_cols=84 Identities=12% Similarity=0.031 Sum_probs=57.6
Q ss_pred CceEEecccchH---hhhccccceeecccC---Ch-hhHHHHHHhCCceeeccccccchhhHHHHhhhhcceEEeeecCC
Q 037721 333 RGVVHTGWVQQQ---LILRHESVGCYVCHS---GF-SSVTEAVISDCQLVLLPLKGDQFLNSKLVAGDLKAGVEVNRRDH 405 (465)
Q Consensus 333 ~nv~~~~~~pq~---~vL~~~~~~~~ItHg---G~-~s~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 405 (465)
.++.+.+++|+. +++..+++ ||.-+ |. .+++||+++|+|+|+ -..+ ....+++. ..|+.++..
T Consensus 295 ~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~-~~G~lv~~~-- 364 (413)
T 2x0d_A 295 IHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWH-SNIVSLEQL-- 364 (413)
T ss_dssp EEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTB-TTEEEESSC--
T ss_pred CcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcC-CCEEEeCCC--
Confidence 378899999865 46677787 66421 33 578999999999998 3222 12344444 568777763
Q ss_pred CCccCHHHHHHHHHHhhcccCCcchHHHHHH
Q 037721 406 DGHFGKEDIFKAVKTVMVDVNKEPGASIRAN 436 (465)
Q Consensus 406 ~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~ 436 (465)
+++++.++|.++++ |++.+++
T Consensus 365 ----d~~~la~ai~~ll~------~~~~~~~ 385 (413)
T 2x0d_A 365 ----NPENIAETLVELCM------SFNNRDV 385 (413)
T ss_dssp ----SHHHHHHHHHHHHH------HTC----
T ss_pred ----CHHHHHHHHHHHHc------CHHHHHH
Confidence 89999999999998 6666655
No 57
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=95.32 E-value=0.18 Score=47.34 Aligned_cols=45 Identities=11% Similarity=0.132 Sum_probs=40.1
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCCChhhhhc
Q 037721 11 LHVVMFPWFAFGHISPFVQLSNKLSLH--GVKVSFFSAPGNIPRIKS 55 (465)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~V~~~~~~~~~~~i~~ 55 (465)
+||+++-..+.|++.-..++.++|+++ +.+|++++.+.+.+.++.
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~ 47 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSW 47 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHHT
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHhc
Confidence 379999999999999999999999886 899999999988777654
No 58
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=93.53 E-value=0.25 Score=44.39 Aligned_cols=114 Identities=19% Similarity=0.189 Sum_probs=67.4
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhcccCCCCCeeEEEccCCCCCCCCCCCCCCCCCc
Q 037721 8 ADQLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSSLNLTPMADIIPLQIPHVDGLPPGLDSTSEMT 87 (465)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 87 (465)
.+++|||+.-=-|. |..-+..|+++|.+ +|+|+++.+...++-....-++...+++..+. + +.......|
T Consensus 9 ~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~----~----~~~~v~GTP 78 (261)
T 3ty2_A 9 TPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSGASNSLTLNAPLHIKNLE----N----GMISVEGTP 78 (261)
T ss_dssp --CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTTCTTCCCCSSCEEEEECT----T----SCEEESSCH
T ss_pred CCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcCcccceecCCCeEEEEec----C----CeEEECCCH
Confidence 44688877665555 66678888999977 89999999987766543332444556666653 1 112233344
Q ss_pred hHHHHHHHHHHHhhHHHHHHHHhhcCCcEEEEcC---------CCcc----cccccccccCCeeEEEec
Q 037721 88 PHMAELLKQALDLMQPQIKTLLSQLKPHFVFFDF---------THYW----LPGLVGSQLGIKTVNFSV 143 (465)
Q Consensus 88 ~~~~~~~~~~~~~~~~~l~~~l~~~~pD~vi~D~---------~~~~----~~~~~A~~~giP~v~~~~ 143 (465)
.++..+ .+..++ ..+||+||+.. ..++ |..- |..+|||.|.++.
T Consensus 79 aDCV~l----------al~~l~-~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~E-a~~~GiPaIA~S~ 135 (261)
T 3ty2_A 79 TDCVHL----------AITGVL-PEMPDMVVAGINAGPNLGDDVWYSGTVAAAME-GRFLGLPALAVSL 135 (261)
T ss_dssp HHHHHH----------HTTTTS-SSCCSEEEEEEEESCCCGGGGGTCHHHHHC-C-CSTTSCCEEEEEE
T ss_pred HHHHHH----------HHHHhc-CCCCCEEEECCcCCCCCCCCcCCchHHHHHHH-HHHcCCCeEEEEc
Confidence 333222 122223 24799999742 1122 2344 6678999999875
No 59
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=91.24 E-value=0.73 Score=41.16 Aligned_cols=113 Identities=18% Similarity=0.235 Sum_probs=67.1
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhcccCCCCCeeEEEccCCCCCCCCCCCCCCCCCchHH
Q 037721 11 LHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSSLNLTPMADIIPLQIPHVDGLPPGLDSTSEMTPHM 90 (465)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 90 (465)
+|||+.-=-+. |..-+..|+++|.+.| +|+++.+...++-+...-++...+++..+. .+.. ......|.++
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~sit~~~pl~~~~~~----~~~~---~~v~GTPaDC 72 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSLTFTEPLKMRKID----TDFY---TVIDGTPADC 72 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSCCCSSCEEEEEEE----TTEE---EETTCCHHHH
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCCccceecCCCeEEEEec----CCCe---EEECCCHHHH
Confidence 46666544444 5566888999999988 999999987766554333444567776664 1110 1223334333
Q ss_pred HHHHHHHHHhhHHHHHHHHhhcCCcEEEEcCC---------Ccc----cccccccccCCeeEEEec
Q 037721 91 AELLKQALDLMQPQIKTLLSQLKPHFVFFDFT---------HYW----LPGLVGSQLGIKTVNFSV 143 (465)
Q Consensus 91 ~~~~~~~~~~~~~~l~~~l~~~~pD~vi~D~~---------~~~----~~~~~A~~~giP~v~~~~ 143 (465)
..+ .+..++...+||+||+..- .++ |..- |..+|||.|.++.
T Consensus 73 V~l----------al~~l~~~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~E-a~~~GiPaIA~S~ 127 (251)
T 2phj_A 73 VHL----------GYRVILEEKKPDLVLSGINEGPNLGEDITYSGTVSGAME-GRILGIPSIAFSA 127 (251)
T ss_dssp HHH----------HHHTTTTTCCCSEEEEEEESSCCCGGGGGGCHHHHHHHH-HHHTTCCEEEEEE
T ss_pred HHH----------HHHHhcCCCCCCEEEECCcCCCcCCCCCccchHHHHHHH-HHHcCCCeEEEEc
Confidence 221 2344444468999997421 122 2234 5578999998865
No 60
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=90.28 E-value=0.85 Score=40.93 Aligned_cols=112 Identities=17% Similarity=0.213 Sum_probs=64.8
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhcccCCCCCeeEEEccCCCCCCCCCCCCCCCCCchHHH
Q 037721 12 HVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSSLNLTPMADIIPLQIPHVDGLPPGLDSTSEMTPHMA 91 (465)
Q Consensus 12 ~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 91 (465)
|||+.-=-|. |..-+..|+++|.+.| +|+++.+...++-+...-++...+++..+. .. ........|.++.
T Consensus 3 ~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~siT~~~pl~~~~~~----~~---~~~~v~GTPaDCV 73 (251)
T 2wqk_A 3 TFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSLTFTEPLKMRKID----TD---FYTVIDGTPADCV 73 (251)
T ss_dssp EEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSCCCSSCEEEEEEE----TT---EEEETTCCHHHHH
T ss_pred EEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCcccccCcCCCCCceeEEee----cc---ceeecCCChHHHH
Confidence 4554433333 4455778899999998 599998887665543332444556666654 10 0111223343332
Q ss_pred HHHHHHHHhhHHHHHHHHhhcCCcEEEEcCC---------Ccc----cccccccccCCeeEEEec
Q 037721 92 ELLKQALDLMQPQIKTLLSQLKPHFVFFDFT---------HYW----LPGLVGSQLGIKTVNFSV 143 (465)
Q Consensus 92 ~~~~~~~~~~~~~l~~~l~~~~pD~vi~D~~---------~~~----~~~~~A~~~giP~v~~~~ 143 (465)
. -.+..++.+.+||+||+..- .++ |+.- |..+|||.|.++.
T Consensus 74 ~----------lal~~~l~~~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~E-a~~~GipaIA~S~ 127 (251)
T 2wqk_A 74 H----------LGYRVILEEKKPDLVLSGINEGPNLGEDITYSGTVSGAME-GRILGIPSIAFSA 127 (251)
T ss_dssp H----------HHHHTTTTTCCCSEEEEEEESSCCCGGGGGGCHHHHHHHH-HHHTTCCEEEEEE
T ss_pred h----------hhhhhhcCCCCCCEEEeCccCCCccccceecchHHHHHHH-HHhcCCCeEEEEc
Confidence 2 13445666779999998421 122 3344 5578999999864
No 61
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=89.38 E-value=4.6 Score=34.58 Aligned_cols=98 Identities=12% Similarity=0.057 Sum_probs=65.4
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCC------hhhhhcccCCCCCeeEEEccCCCCCCCCCCCCC
Q 037721 9 DQLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGN------IPRIKSSLNLTPMADIIPLQIPHVDGLPPGLDS 82 (465)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~------~~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~~~ 82 (465)
++-.|++++..+.|-..-.+.+|-..+.+|++|.|+..-.. ...++..+ +++.... .++. .
T Consensus 27 ~~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~L~-----v~~~~~g----~gf~----~ 93 (196)
T 1g5t_A 27 ERGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPHG-----VEFQVMA----TGFT----W 93 (196)
T ss_dssp CCCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGGGT-----CEEEECC----TTCC----C
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHhCC-----cEEEEcc----cccc----c
Confidence 45678999999999999999999999999999999965443 12344444 7887775 2221 1
Q ss_pred CCCCchHHHHHHHHHHHhhHHHHHHHHhhcCCcEEEEcCCC
Q 037721 83 TSEMTPHMAELLKQALDLMQPQIKTLLSQLKPHFVFFDFTH 123 (465)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~vi~D~~~ 123 (465)
.... . +..............+.+.+.++|+||.|-+.
T Consensus 94 -~~~~--~-~~~~~~a~~~l~~a~~~l~~~~yDlvILDEi~ 130 (196)
T 1g5t_A 94 -ETQN--R-EADTAACMAVWQHGKRMLADPLLDMVVLDELT 130 (196)
T ss_dssp -CGGG--H-HHHHHHHHHHHHHHHHHTTCTTCSEEEEETHH
T ss_pred -CCCC--c-HHHHHHHHHHHHHHHHHHhcCCCCEEEEeCCC
Confidence 1111 0 11122223344566677777789999999854
No 62
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=87.58 E-value=2.1 Score=38.40 Aligned_cols=111 Identities=16% Similarity=0.214 Sum_probs=64.6
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhcccCCCCCeeEEEccCCCCCCCCCCCCCCC-CCchH
Q 037721 11 LHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSSLNLTPMADIIPLQIPHVDGLPPGLDSTS-EMTPH 89 (465)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~ 89 (465)
+|||+.-=-+. |..-+..|+++|++.| +|+++.+...++-+...-++...+++..+. . ...... ..|.+
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~Sg~g~aiTl~~Pl~~~~~~----~----~~~~v~~GTPaD 71 (254)
T 2v4n_A 2 MRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNRSGASNSLTLESSLRTFTFD----N----GDIAVQMGTPTD 71 (254)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCCCCSSCCEEEECT----T----SCEEEETCCHHH
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCCcCccCCcCCCCCeEEEEeC----C----CCeEECCCCHHH
Confidence 35655444444 5556788999998876 999999988766554433444456665552 1 111223 34433
Q ss_pred HHHHHHHHHHhhHHHHHHHHhhcCCcEEEEcCC---------Ccc----cccccccccCCeeEEEec
Q 037721 90 MAELLKQALDLMQPQIKTLLSQLKPHFVFFDFT---------HYW----LPGLVGSQLGIKTVNFSV 143 (465)
Q Consensus 90 ~~~~~~~~~~~~~~~l~~~l~~~~pD~vi~D~~---------~~~----~~~~~A~~~giP~v~~~~ 143 (465)
+..+ .+..++ ..+||+||+..- .++ |..- |..+|||.|.++.
T Consensus 72 CV~l----------al~~ll-~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~E-a~~~GiPaIA~S~ 126 (254)
T 2v4n_A 72 CVYL----------GVNALM-RPRPDIVVSGINAGPNLGDDVIYSGTVAAAME-GRHLGFPALAVSL 126 (254)
T ss_dssp HHHH----------HHHTTS-SSCCSEEEEEEEESCCCGGGGGGCHHHHHHHT-TTTSSSCEEEEEE
T ss_pred HHHH----------HHhhcc-CCCCCEeeeCCcCCCCCCCCeeccHHHHHHHH-HHhcCCCeEEEec
Confidence 3322 222333 358999997421 122 2344 5678999999865
No 63
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=86.26 E-value=6.1 Score=40.75 Aligned_cols=41 Identities=12% Similarity=0.157 Sum_probs=30.0
Q ss_pred Eecccch---------HhhhccccceeecccC---Ch-hhHHHHHHhCCceeeccc
Q 037721 337 HTGWVQQ---------QLILRHESVGCYVCHS---GF-SSVTEAVISDCQLVLLPL 379 (465)
Q Consensus 337 ~~~~~pq---------~~vL~~~~~~~~ItHg---G~-~s~~Eal~~GvP~l~~P~ 379 (465)
+..|++. .++++.+++ ||.-+ |+ .+.+||+++|+|+|+--.
T Consensus 497 ~P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~ 550 (725)
T 3nb0_A 497 HPEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNV 550 (725)
T ss_dssp CCSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETT
T ss_pred eccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCC
Confidence 4467765 457888888 66432 33 589999999999999554
No 64
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=84.19 E-value=2.5 Score=38.50 Aligned_cols=112 Identities=14% Similarity=0.062 Sum_probs=63.9
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhcccCCCCCeeEEEccCCCCCCCCCCCCCCCCCchHHH
Q 037721 12 HVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSSLNLTPMADIIPLQIPHVDGLPPGLDSTSEMTPHMA 91 (465)
Q Consensus 12 ~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 91 (465)
|||+.-=-|. +..-+..|+++|++.| +|+++.+...++-+...-++...+++..++.. +. .. ......|.++.
T Consensus 2 ~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg~g~siTl~~pl~~~~~~~~---~~-~~-~~v~GTPaDCV 74 (280)
T 1l5x_A 2 KILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSATGLGITLHKPLRMYEVDLC---GF-RA-IATSGTPSDTV 74 (280)
T ss_dssp EEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTSCSSCCCSSCBCEEEEECS---SS-EE-EEESSCHHHHH
T ss_pred eEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEeccC---CC-ce-EEECCcHHHHH
Confidence 4444333333 4455788999999988 99999998876655443344456777666410 10 01 12233443332
Q ss_pred HHHHHHHHhhHHHHHHHHhhcCCcEEEEcC----------CCcc----cccccccccCCeeEEEec
Q 037721 92 ELLKQALDLMQPQIKTLLSQLKPHFVFFDF----------THYW----LPGLVGSQLGIKTVNFSV 143 (465)
Q Consensus 92 ~~~~~~~~~~~~~l~~~l~~~~pD~vi~D~----------~~~~----~~~~~A~~~giP~v~~~~ 143 (465)
.+ .+..+ ..+||+||+.. ..++ |..- |..+|||.|.++.
T Consensus 75 ~l----------al~~l--~~~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~E-a~~~GiPaIA~S~ 127 (280)
T 1l5x_A 75 YL----------ATFGL--GRKYDIVLSGINLGDNTSLQVILSSGTLGAAFQ-AALLGIPALAYSA 127 (280)
T ss_dssp HH----------HHHHH--TSCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHH-HHHTTCCEEEEEE
T ss_pred HH----------HHhcC--CCCCCEEEECCccCCcCCccccccchhHHHHHH-HHHcCCCeEEEEc
Confidence 22 22233 46899999742 1222 2233 4568999999875
No 65
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=83.93 E-value=2.3 Score=37.94 Aligned_cols=114 Identities=11% Similarity=0.053 Sum_probs=63.2
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhcccCCCCCeeEEEccCCCCCCCCCCCCCCCCCchHHH
Q 037721 12 HVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSSLNLTPMADIIPLQIPHVDGLPPGLDSTSEMTPHMA 91 (465)
Q Consensus 12 ~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 91 (465)
|||+.-=-|. |..-+..|+++|++.| +|+++.+...++-+...-++...+++..+... ++. ........|.++.
T Consensus 2 ~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~--~~~--~~~~v~GTPaDCV 75 (247)
T 1j9j_A 2 RILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSATGHSITIHVPLWMKKVFIS--ERV--VAYSTTGTPADCV 75 (247)
T ss_dssp EEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCCCCSSCCCEEECCCS--SSE--EEEEESSCHHHHH
T ss_pred eEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEeccC--CCC--ceEEECCcHHHHH
Confidence 4444333333 4455788999999888 89999998876655443344455666666410 000 0011223343332
Q ss_pred HHHHHHHHhhHHHHHHHHhhcCCcEEEEcCC---------Ccc----cccccccccCCeeEEEec
Q 037721 92 ELLKQALDLMQPQIKTLLSQLKPHFVFFDFT---------HYW----LPGLVGSQLGIKTVNFSV 143 (465)
Q Consensus 92 ~~~~~~~~~~~~~l~~~l~~~~pD~vi~D~~---------~~~----~~~~~A~~~giP~v~~~~ 143 (465)
.+ .+..++ ..+||+||+..- .++ |..- |..+|||.|.++.
T Consensus 76 ~l----------al~~l~-~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~E-a~~~GiPaIA~S~ 128 (247)
T 1j9j_A 76 KL----------AYNVVM-DKRVDLIVSGVNRGPNMGMDILHSGTVSGAME-GAMMNIPSIAISS 128 (247)
T ss_dssp HH----------HHHTTS-TTCCSEEEEEEEESCCCGGGGGGCHHHHHHHH-HHHTTCCEEEEEE
T ss_pred HH----------HHHhhc-cCCCCEEEECCccCCCCCcCeecchhHHHHHH-HHhcCCCeEEEec
Confidence 21 222333 358999997421 112 2233 4568999999865
No 66
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=82.10 E-value=13 Score=36.92 Aligned_cols=110 Identities=14% Similarity=0.124 Sum_probs=71.2
Q ss_pred ceEEecccchH---hhhccccceeecc---cCChh-hHHHHHHhC---CceeeccccccchhhHHHHhhhhcceEEeeec
Q 037721 334 GVVHTGWVQQQ---LILRHESVGCYVC---HSGFS-SVTEAVISD---CQLVLLPLKGDQFLNSKLVAGDLKAGVEVNRR 403 (465)
Q Consensus 334 nv~~~~~~pq~---~vL~~~~~~~~It---HgG~~-s~~Eal~~G---vP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~ 403 (465)
.|++.+.+|+. +++..+++ |+. .=|+| +.+|++++| .|+|+--+.+ .+..+. .-|+.++.
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l~---~~allVnP- 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVLG---EYCRSVNP- 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHHG---GGSEEECT-
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHhC---CCEEEECC-
Confidence 47777778764 45556777 543 45777 569999996 5655533322 222221 13677776
Q ss_pred CCCCccCHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHh
Q 037721 404 DHDGHFGKEDIFKAVKTVMVDVNKEPGASIRANQKWWREFLLNGQIQDKFIADFVKDLKA 463 (465)
Q Consensus 404 ~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~l~~ 463 (465)
.+.++++++|.++|+. ..++-+++.+++.+.+++. ....-++.+++.|+.
T Consensus 423 -----~D~~~lA~AI~~aL~m----~~~er~~r~~~~~~~V~~~-d~~~W~~~fl~~L~~ 472 (496)
T 3t5t_A 423 -----FDLVEQAEAISAALAA----GPRQRAEAAARRRDAARPW-TLEAWVQAQLDGLAA 472 (496)
T ss_dssp -----TBHHHHHHHHHHHHHC----CHHHHHHHHHHHHHHHTTC-BHHHHHHHHHHHHHH
T ss_pred -----CCHHHHHHHHHHHHcC----CHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHhh
Confidence 4899999999999861 1356677777777777654 455556777776653
No 67
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=81.83 E-value=5.8 Score=35.22 Aligned_cols=114 Identities=12% Similarity=0.073 Sum_probs=63.5
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhcccCCCCCeeEEEccCCCC-CCCCCCCCCCCCCchHH
Q 037721 12 HVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSSLNLTPMADIIPLQIPHV-DGLPPGLDSTSEMTPHM 90 (465)
Q Consensus 12 ~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~~g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~ 90 (465)
|||+.-=-|. |..-+..|+++|.+.| +|+++.+...++-+...-++...+++..++.... ++. ........|.++
T Consensus 2 ~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~~~~~~--~~~~v~GTPaDC 77 (244)
T 2e6c_A 2 RILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAAGHAITIAHPVRAYPHPSPLHAPHF--PAYRVRGTPADC 77 (244)
T ss_dssp EEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCCCSSCCCSSCBEEEECCCCTTSCCC--CEEEEESCHHHH
T ss_pred eEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEeccCcCCCCC--ceEEEcCcHHHH
Confidence 4444433333 4455788999999888 8999999877655443334556678877751100 000 011222334333
Q ss_pred HHHHHHHHHhhHHHHHHHHhhcCCcEEEEcCC---------Ccc----cccccccccCCeeEEEec
Q 037721 91 AELLKQALDLMQPQIKTLLSQLKPHFVFFDFT---------HYW----LPGLVGSQLGIKTVNFSV 143 (465)
Q Consensus 91 ~~~~~~~~~~~~~~l~~~l~~~~pD~vi~D~~---------~~~----~~~~~A~~~giP~v~~~~ 143 (465)
..+ .+. + ..+||+||+..- .++ |..- |..+|||.|.++.
T Consensus 78 V~l----------al~--l-~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~E-a~~~GiPaIA~S~ 129 (244)
T 2e6c_A 78 VAL----------GLH--L-FGPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQ-GYLFGLSAAAFSV 129 (244)
T ss_dssp HHH----------HHH--H-SCSCCEEEEEEEESCCCGGGGGGCHHHHHHHH-HHHTTCEEEEEEE
T ss_pred HHH----------HHc--C-CCCCCEEEECCccCCCCCcCeechHhHHHHHH-HHhcCCCeEEEec
Confidence 222 111 2 458999997421 112 2333 4578999998864
No 68
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=77.81 E-value=8.9 Score=36.09 Aligned_cols=41 Identities=20% Similarity=0.124 Sum_probs=34.0
Q ss_pred CcEEEEecC-CCccCHHHHHHHHHHHHhCCCEEEEEeCCCCh
Q 037721 10 QLHVVMFPW-FAFGHISPFVQLSNKLSLHGVKVSFFSAPGNI 50 (465)
Q Consensus 10 ~~~il~~~~-~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~ 50 (465)
..+|+|++. ||-|-..-..+||..|+++|++|.++..+...
T Consensus 25 ~~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~~ 66 (349)
T 3ug7_A 25 GTKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDPAH 66 (349)
T ss_dssp SCEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCTTC
T ss_pred CCEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 345555544 79999999999999999999999999988743
No 69
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=75.92 E-value=1.6 Score=42.35 Aligned_cols=41 Identities=12% Similarity=0.050 Sum_probs=31.3
Q ss_pred CCCcEEEEecCC-Cc----cCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 037721 8 ADQLHVVMFPWF-AF----GHISPFVQLSNKLSLHGVKVSFFSAPG 48 (465)
Q Consensus 8 ~~~~~il~~~~~-~~----GH~~p~l~La~~L~~rGh~V~~~~~~~ 48 (465)
..++||++++.. .. |=......++++|+++||+|++++...
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 456899886643 21 334568999999999999999999864
No 70
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=75.46 E-value=11 Score=35.16 Aligned_cols=103 Identities=7% Similarity=-0.043 Sum_probs=55.6
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCC--------ChhhhhcccCCCCCeeEEEccCCCCCCCCCC
Q 037721 8 ADQLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPG--------NIPRIKSSLNLTPMADIIPLQIPHVDGLPPG 79 (465)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~--------~~~~i~~~g~~~~~~~~~~l~~~~~~~~~~~ 79 (465)
+.++||+|+. --+....+.++|.++||+|..+.+.. ..+...+.| +.+.... .+...
T Consensus 20 ~~~mrIvf~G-----~~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~~~~~v~~~A~~~g-----Ipv~~~~-----~~~~~ 84 (329)
T 2bw0_A 20 FQSMKIAVIG-----QSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEKDG-----VPVFKYS-----RWRAK 84 (329)
T ss_dssp -CCCEEEEEC-----CHHHHHHHHHHHHHTTCEEEEEEECCCCSSCCCHHHHHHHHHT-----CCEEECS-----CCEET
T ss_pred CCCCEEEEEc-----CcHHHHHHHHHHHHCCCeEEEEEeCCCcCCCCCHHHHHHHHcC-----CCEEecC-----ccccc
Confidence 4468999982 22333456788889999987766521 122334444 5554442 11000
Q ss_pred CCCCCCCchHHHHHHHHHHHhhHHHHHHHHhhcCCcEEEEcCCCcc-cccccccccCCeeEEEecch
Q 037721 80 LDSTSEMTPHMAELLKQALDLMQPQIKTLLSQLKPHFVFFDFTHYW-LPGLVGSQLGIKTVNFSVFS 145 (465)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~vi~D~~~~~-~~~~~A~~~giP~v~~~~~~ 145 (465)
....+.+.+.+++.+||++|+-.+.-. ...+ -+.....++.++++.
T Consensus 85 -------------------~~~~~~~~~~l~~~~~Dliv~a~y~~ilp~~i-l~~~~~g~iNiHpSL 131 (329)
T 2bw0_A 85 -------------------GQALPDVVAKYQALGAELNVLPFCSQFIPMEI-ISAPRHGSIIYHPSL 131 (329)
T ss_dssp -------------------TEECHHHHHHHHTTCCSEEEESSCSSCCCHHH-HTCSTTCEEEEESSC
T ss_pred -------------------ccccHHHHHHHHhcCCCEEEEeehhhhCCHHH-HhhCcCCEEEEcCCc
Confidence 001134556778889999887653211 2233 344455677776643
No 71
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=73.54 E-value=26 Score=30.35 Aligned_cols=103 Identities=9% Similarity=0.001 Sum_probs=57.7
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCC--EEEEEeCC-CCh---hhhhcccCCCCCeeEEEccCCCCCCCCCCCCCCC
Q 037721 11 LHVVMFPWFAFGHISPFVQLSNKLSLHGV--KVSFFSAP-GNI---PRIKSSLNLTPMADIIPLQIPHVDGLPPGLDSTS 84 (465)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGh--~V~~~~~~-~~~---~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~ 84 (465)
+||+|+..++.. -+..+.++|.+.+| +|..+.+. ... +.+++.| +.+..++ ...+ .
T Consensus 2 ~rI~vl~SG~g~---~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~g-----Ip~~~~~---~~~~----~--- 63 (216)
T 2ywr_A 2 LKIGVLVSGRGS---NLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKHN-----VECKVIQ---RKEF----P--- 63 (216)
T ss_dssp EEEEEEECSCCH---HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHHT-----CCEEECC---GGGS----S---
T ss_pred CEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHcC-----CCEEEeC---cccc----c---
Confidence 378888766543 35667778888887 76555433 222 3355555 6666553 0111 0
Q ss_pred CCchHHHHHHHHHHHhhHHHHHHHHhhcCCcEEEEcCC-CcccccccccccCCeeEEEecc
Q 037721 85 EMTPHMAELLKQALDLMQPQIKTLLSQLKPHFVFFDFT-HYWLPGLVGSQLGIKTVNFSVF 144 (465)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~vi~D~~-~~~~~~~~A~~~giP~v~~~~~ 144 (465)
+ .+...+.+.+.+++.+||++|.-.+ -.-...+ -+.....++.++++
T Consensus 64 ~------------r~~~~~~~~~~l~~~~~Dliv~a~y~~il~~~~-l~~~~~~~iNiHpS 111 (216)
T 2ywr_A 64 S------------KKEFEERMALELKKKGVELVVLAGFMRILSHNF-LKYFPNKVINIHPS 111 (216)
T ss_dssp S------------HHHHHHHHHHHHHHTTCCEEEESSCCSCCCHHH-HTTSTTCEEEEESS
T ss_pred c------------hhhhhHHHHHHHHhcCCCEEEEeCchhhCCHHH-HhhccCCeEEEcCC
Confidence 0 0112345677888899999887543 2222234 44455567777653
No 72
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=72.32 E-value=5.8 Score=31.70 Aligned_cols=39 Identities=13% Similarity=-0.009 Sum_probs=34.7
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 037721 9 DQLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAP 47 (465)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~ 47 (465)
++.+|++.+.++-+|-....-++..|..+|++|++....
T Consensus 2 ~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~ 40 (137)
T 1ccw_A 2 EKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVL 40 (137)
T ss_dssp CCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCC
Confidence 356899999999999999999999999999999988654
No 73
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=70.32 E-value=5.6 Score=34.45 Aligned_cols=48 Identities=10% Similarity=0.084 Sum_probs=38.1
Q ss_pred CCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhcc
Q 037721 7 EADQLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSS 56 (465)
Q Consensus 7 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~~ 56 (465)
..++.||++.-.++.+-.. ...|.+.|.++| +|.++.++....++...
T Consensus 16 ~l~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv~~~ 63 (209)
T 1mvl_A 16 TPRKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFLDKL 63 (209)
T ss_dssp ---CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTCCGG
T ss_pred ccCCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhcCHH
Confidence 3446789998888888766 899999999999 99999999877766543
No 74
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=69.90 E-value=25 Score=29.50 Aligned_cols=39 Identities=13% Similarity=0.305 Sum_probs=31.2
Q ss_pred EEEe-cCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChh
Q 037721 13 VVMF-PWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIP 51 (465)
Q Consensus 13 il~~-~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~ 51 (465)
|+|. +-++-|=..-...||..|+++|++|.++-.+....
T Consensus 4 i~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~~~~ 43 (206)
T 4dzz_A 4 ISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQMS 43 (206)
T ss_dssp EEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred EEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCCCCC
Confidence 3343 34789999999999999999999999997664443
No 75
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=69.61 E-value=13 Score=34.69 Aligned_cols=42 Identities=14% Similarity=0.036 Sum_probs=34.6
Q ss_pred cEEEEecC-CCccCHHHHHHHHHHHHhCCCEEEEEeCCCChhh
Q 037721 11 LHVVMFPW-FAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPR 52 (465)
Q Consensus 11 ~~il~~~~-~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~ 52 (465)
.+|+|++. ||-|-..-...||..|+++|++|.++..+.....
T Consensus 16 ~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~~~~l 58 (334)
T 3iqw_A 16 LRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPAHNL 58 (334)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCSSCHH
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCCCCCh
Confidence 45665544 7999999999999999999999999998865443
No 76
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=68.52 E-value=32 Score=29.92 Aligned_cols=152 Identities=11% Similarity=0.003 Sum_probs=79.4
Q ss_pred ccCCCCCCeEEEEEeCCcccCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhhhhhcCCCceEEecccc
Q 037721 263 WLCKYPPKSVIYCSFGSETFLTVDQIKELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQ 342 (465)
Q Consensus 263 ~l~~~~~~~~v~vs~GS~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~p 342 (465)
|++-.+ ++++.|..|.++ ...+..|...|..+.++... ..+.+.......++......-
T Consensus 26 fl~L~g-k~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~-------------~~~~l~~l~~~~~i~~i~~~~ 84 (223)
T 3dfz_A 26 MLDLKG-RSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPT-------------VSAEINEWEAKGQLRVKRKKV 84 (223)
T ss_dssp EECCTT-CCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSS-------------CCHHHHHHHHTTSCEEECSCC
T ss_pred EEEcCC-CEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCC-------------CCHHHHHHHHcCCcEEEECCC
Confidence 455443 568888777544 34555666678887776432 111222111112333323222
Q ss_pred hHhhhccccceeecccCChhhHHHHHHh----CCceeeccccccchhhHH-----HHhhhhcceEEeeecCCCCccCHHH
Q 037721 343 QQLILRHESVGCYVCHSGFSSVTEAVIS----DCQLVLLPLKGDQFLNSK-----LVAGDLKAGVEVNRRDHDGHFGKED 413 (465)
Q Consensus 343 q~~vL~~~~~~~~ItHgG~~s~~Eal~~----GvP~l~~P~~~DQ~~na~-----~v~~~~G~G~~l~~~~~~~~~~~~~ 413 (465)
+.+-|..+++ +|.--|.-.+.+.++. |+|+-+ .|.+..+. .+.+- ++-+.+.... ..-.-+..
T Consensus 85 ~~~dL~~adL--VIaAT~d~~~N~~I~~~ak~gi~VNv----vD~p~~~~f~~Paiv~rg-~l~iaIST~G-~sP~la~~ 156 (223)
T 3dfz_A 85 GEEDLLNVFF--IVVATNDQAVNKFVKQHIKNDQLVNM----ASSFSDGNIQIPAQFSRG-RLSLAISTDG-ASPLLTKR 156 (223)
T ss_dssp CGGGSSSCSE--EEECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEEEET-TEEEEEECTT-SCHHHHHH
T ss_pred CHhHhCCCCE--EEECCCCHHHHHHHHHHHhCCCEEEE----eCCcccCeEEEeeEEEeC-CEEEEEECCC-CCcHHHHH
Confidence 3445666666 8888887666655554 555432 34444332 22333 4444454432 11244577
Q ss_pred HHHHHHHhhcccCCcchHHHHHHHHHHHHHHHcC
Q 037721 414 IFKAVKTVMVDVNKEPGASIRANQKWWREFLLNG 447 (465)
Q Consensus 414 l~~ai~~ll~~~~~~~~~~~~~~a~~l~~~~~~~ 447 (465)
|++.|++.+. ..-..+-+.+.++++++++.
T Consensus 157 iR~~ie~~lp----~~~~~~~~~~~~~R~~vk~~ 186 (223)
T 3dfz_A 157 IKEDLSSNYD----ESYTQYTQFLYECRVLIHRL 186 (223)
T ss_dssp HHHHHHHHSC----THHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcc----HHHHHHHHHHHHHHHHHHHH
Confidence 8888887774 22366778888888888764
No 77
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=67.18 E-value=45 Score=30.79 Aligned_cols=36 Identities=11% Similarity=0.019 Sum_probs=25.2
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 037721 8 ADQLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPG 48 (465)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~ 48 (465)
++++||+|+-.|.++ ...-++|.++||+|..+.+..
T Consensus 5 ~~~mrivf~Gt~~fa-----~~~L~~L~~~~~~v~~Vvt~p 40 (318)
T 3q0i_A 5 SQSLRIVFAGTPDFA-----ARHLAALLSSEHEIIAVYTQP 40 (318)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHTSSSEEEEEECCC
T ss_pred ccCCEEEEEecCHHH-----HHHHHHHHHCCCcEEEEEcCC
Confidence 457899999887433 344577888899998777653
No 78
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=66.76 E-value=40 Score=28.05 Aligned_cols=142 Identities=13% Similarity=0.143 Sum_probs=77.7
Q ss_pred CeEEEEEeCCcccCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhhhhhcCCCceEEecccchHhhhcc
Q 037721 270 KSVIYCSFGSETFLTVDQIKELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRH 349 (465)
Q Consensus 270 ~~~v~vs~GS~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~ 349 (465)
+|.|=|-+||.+ +.+..++..+.|+..++.+-+.+-.. ...|+.+.+. +-. ...
T Consensus 22 kp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SA----------HRtp~~l~~~-----------~~~---a~~ 75 (181)
T 4b4k_A 22 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA----------HRTPDYMFEY-----------AET---ARE 75 (181)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT----------TTSHHHHHHH-----------HHH---TTT
T ss_pred CccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEcc----------ccChHHHHHH-----------HHH---HHh
Confidence 567888899976 56677888888888888875555442 3444433211 000 001
Q ss_pred ccceeecccCChh----hHHHHHHhCCceeeccccc---cchhhHHHHhhhhcceEEeeecCC--CCccCHHHHHHHHHH
Q 037721 350 ESVGCYVCHSGFS----SVTEAVISDCQLVLLPLKG---DQFLNSKLVAGDLKAGVEVNRRDH--DGHFGKEDIFKAVKT 420 (465)
Q Consensus 350 ~~~~~~ItHgG~~----s~~Eal~~GvP~l~~P~~~---DQ~~na~~v~~~~G~G~~l~~~~~--~~~~~~~~l~~ai~~ 420 (465)
..++.+|.-.|.- ++. |-..-+|+|.+|... +-.+.-.-+.++ --|+.+-.-+- .+..++.-+...|-.
T Consensus 76 ~g~~ViIa~AG~aahLpGvv-Aa~T~~PVIGVPv~s~~l~G~DsLlSivQM-P~GvpVaTvaig~~ga~NAallA~qILa 153 (181)
T 4b4k_A 76 RGLKVIIAGAGGAAHLPGMV-AAKTNLPVIGVPVQSKALNGLDSLLSIVQM-PGGVPVATVAIGKAGSTNAGLLAAQILG 153 (181)
T ss_dssp TTCCEEEEEECSSCCHHHHH-HTTCCSCEEEEECCCTTTTTHHHHHHHHTC-CTTCCCEECCSSHHHHHHHHHHHHHHHT
T ss_pred cCceEEEEeccccccchhhH-HhcCCCCEEEEecCCCCccchhhHHHHHhC-CCCCceEEEecCCccHHHHHHHHHHHHc
Confidence 1222366666643 333 334568999999854 333334455554 55554433210 001223334444332
Q ss_pred hhcccCCcchHHHHHHHHHHHHHHHc
Q 037721 421 VMVDVNKEPGASIRANQKWWREFLLN 446 (465)
Q Consensus 421 ll~~~~~~~~~~~~~~a~~l~~~~~~ 446 (465)
+. |++++++.+..++.+++
T Consensus 154 -~~------d~~l~~kl~~~r~~~~~ 172 (181)
T 4b4k_A 154 -SF------HDDIHDALELRREAIEK 172 (181)
T ss_dssp -TT------CHHHHHHHHHHHHHHHH
T ss_pred -cC------CHHHHHHHHHHHHHHHH
Confidence 33 78888888888877753
No 79
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=66.20 E-value=7.5 Score=32.57 Aligned_cols=44 Identities=11% Similarity=0.033 Sum_probs=36.3
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhc
Q 037721 11 LHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKS 55 (465)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~ 55 (465)
+||++.-.++.|=.. ...+.+.|+++|++|+++.++.....+..
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~~fi~~ 49 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGRKFING 49 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGGGGSCH
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHHHHhhH
Confidence 588888777766664 88999999999999999999987776643
No 80
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=65.69 E-value=24 Score=34.83 Aligned_cols=108 Identities=18% Similarity=0.262 Sum_probs=68.2
Q ss_pred eE-EecccchHh---hhccccceeecc---cCChh-hHHHHHHhCC-----ceeeccccccchhhHHHHhhhhcceEEee
Q 037721 335 VV-HTGWVQQQL---ILRHESVGCYVC---HSGFS-SVTEAVISDC-----QLVLLPLKGDQFLNSKLVAGDLKAGVEVN 401 (465)
Q Consensus 335 v~-~~~~~pq~~---vL~~~~~~~~It---HgG~~-s~~Eal~~Gv-----P~l~~P~~~DQ~~na~~v~~~~G~G~~l~ 401 (465)
++ +.+++++.+ ++..+++ ||. .=|+| ++.||+++|+ |+|+--+.+- +..+ .-|+.++
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~----~~~l----~~g~lv~ 402 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGA----ANEL----TSALIVN 402 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGG----GGTC----TTSEEEC
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCC----HHHh----CCeEEEC
Confidence 44 457787664 5666777 654 33554 8999999998 6766443221 1111 2356666
Q ss_pred ecCCCCccCHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHh
Q 037721 402 RRDHDGHFGKEDIFKAVKTVMVDVNKEPGASIRANQKWWREFLLNGQIQDKFIADFVKDLKA 463 (465)
Q Consensus 402 ~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~l~~ 463 (465)
. .+.++++++|.++|++ +...-+++.++..+.+++. +.+..++.+++.+++
T Consensus 403 p------~d~~~lA~ai~~lL~~----~~~~r~~~~~~~~~~v~~~-s~~~~a~~~l~~l~~ 453 (482)
T 1uqt_A 403 P------YDRDEVAAALDRALTM----SLAERISRHAEMLDVIVKN-DINHWQECFISDLKQ 453 (482)
T ss_dssp T------TCHHHHHHHHHHHHTC----CHHHHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHH
T ss_pred C------CCHHHHHHHHHHHHcC----CHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHh
Confidence 5 3889999999999972 0233445555666666553 566677888777764
No 81
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=65.01 E-value=31 Score=30.13 Aligned_cols=103 Identities=7% Similarity=0.006 Sum_probs=59.0
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhC--CCEEEEEeCC-CCh---hhhhcccCCCCCeeEEEccCCCCCCCCCCCCCC
Q 037721 10 QLHVVMFPWFAFGHISPFVQLSNKLSLH--GVKVSFFSAP-GNI---PRIKSSLNLTPMADIIPLQIPHVDGLPPGLDST 83 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~V~~~~~~-~~~---~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~ 83 (465)
++||+|+..++.. -+..+.++|.+. +++|..+.+. ... +.+++.| +.+..++ ...+ ..
T Consensus 22 ~~rI~~l~SG~g~---~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~g-----Ip~~~~~---~~~~----~~- 85 (229)
T 3auf_A 22 MIRIGVLISGSGT---NLQAILDGCREGRIPGRVAVVISDRADAYGLERARRAG-----VDALHMD---PAAY----PS- 85 (229)
T ss_dssp CEEEEEEESSCCH---HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHTT-----CEEEECC---GGGS----SS-
T ss_pred CcEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHcC-----CCEEEEC---cccc----cc-
Confidence 4699998777532 356677777766 6787665544 222 3355555 7766654 0111 00
Q ss_pred CCCchHHHHHHHHHHHhhHHHHHHHHhhcCCcEEEEcCC-CcccccccccccCCeeEEEec
Q 037721 84 SEMTPHMAELLKQALDLMQPQIKTLLSQLKPHFVFFDFT-HYWLPGLVGSQLGIKTVNFSV 143 (465)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~vi~D~~-~~~~~~~~A~~~giP~v~~~~ 143 (465)
. +...+.+.+.+++.+||+||.-.+ -.-...+ -+.+...++.+++
T Consensus 86 -----------r---~~~~~~~~~~l~~~~~Dliv~agy~~IL~~~~-l~~~~~~~iNiHp 131 (229)
T 3auf_A 86 -----------R---TAFDAALAERLQAYGVDLVCLAGYMRLVRGPM-LTAFPNRILNIHP 131 (229)
T ss_dssp -----------H---HHHHHHHHHHHHHTTCSEEEESSCCSCCCHHH-HHHSTTCEEEEES
T ss_pred -----------h---hhccHHHHHHHHhcCCCEEEEcChhHhCCHHH-HhhccCCEEEEcc
Confidence 0 112345677888899999887553 2222334 4455556777655
No 82
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=64.51 E-value=5.7 Score=34.39 Aligned_cols=45 Identities=13% Similarity=0.001 Sum_probs=38.1
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhc
Q 037721 10 QLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKS 55 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~ 55 (465)
++||++.-.|+.|-.. ...|.+.|.++|++|.++.++.....+..
T Consensus 4 ~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi~~ 48 (209)
T 3zqu_A 4 PERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVMAT 48 (209)
T ss_dssp CSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHHHH
Confidence 3589888888888777 89999999999999999999987777654
No 83
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=63.93 E-value=21 Score=34.79 Aligned_cols=41 Identities=17% Similarity=0.222 Sum_probs=34.0
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHh-CCCEEEEEeCCCChhh
Q 037721 12 HVVMFPWFAFGHISPFVQLSNKLSL-HGVKVSFFSAPGNIPR 52 (465)
Q Consensus 12 ~il~~~~~~~GH~~p~l~La~~L~~-rGh~V~~~~~~~~~~~ 52 (465)
-+++...|+.|-..-++.+|...+. .|..|.|++.+.....
T Consensus 202 l~ii~G~pg~GKT~lal~ia~~~a~~~g~~vl~~slE~~~~~ 243 (444)
T 2q6t_A 202 LNIIAARPAMGKTAFALTIAQNAALKEGVGVGIYSLEMPAAQ 243 (444)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESSSCHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEECCCCHHH
Confidence 3566777899999999999999886 5899999998866543
No 84
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=63.92 E-value=7.5 Score=34.80 Aligned_cols=47 Identities=15% Similarity=0.107 Sum_probs=33.9
Q ss_pred CCCCCCCCCcEEEEecCC---CccCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 037721 2 GTESAEADQLHVVMFPWF---AFGHISPFVQLSNKLSLHGVKVSFFSAPG 48 (465)
Q Consensus 2 ~~~~~~~~~~~il~~~~~---~~GH~~p~l~La~~L~~rGh~V~~~~~~~ 48 (465)
++..-.+..+|++|++.+ +.|-=.-.-.|+..|.+||++|+..=-++
T Consensus 14 gt~~~~~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DP 63 (295)
T 2vo1_A 14 GTENLYFQSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDP 63 (295)
T ss_dssp -------CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEEC
T ss_pred cccccccccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeeccc
Confidence 344445678899999987 56666788899999999999999985443
No 85
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=62.34 E-value=22 Score=30.80 Aligned_cols=106 Identities=9% Similarity=0.034 Sum_probs=56.9
Q ss_pred CCCCcEEEEecCCCccCHHHHHHHHHHHHh-CCCEEEEEeCCCCh---hhhhcccCCCCCeeEEEccCCCCCCCCCCCCC
Q 037721 7 EADQLHVVMFPWFAFGHISPFVQLSNKLSL-HGVKVSFFSAPGNI---PRIKSSLNLTPMADIIPLQIPHVDGLPPGLDS 82 (465)
Q Consensus 7 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~-rGh~V~~~~~~~~~---~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~~~ 82 (465)
...++||+|+.+++.+.+..++ +++.+ .+++|..+.+...+ ++.++.| +.+..++. ... .
T Consensus 9 ~~~~~ri~vl~SG~gsnl~all---~~~~~~~~~eI~~Vis~~~a~~~~~A~~~g-----Ip~~~~~~---~~~----~- 72 (215)
T 3da8_A 9 PSAPARLVVLASGTGSLLRSLL---DAAVGDYPARVVAVGVDRECRAAEIAAEAS-----VPVFTVRL---ADH----P- 72 (215)
T ss_dssp CCSSEEEEEEESSCCHHHHHHH---HHSSTTCSEEEEEEEESSCCHHHHHHHHTT-----CCEEECCG---GGS----S-
T ss_pred CCCCcEEEEEEeCChHHHHHHH---HHHhccCCCeEEEEEeCCchHHHHHHHHcC-----CCEEEeCc---ccc----c-
Confidence 3456799998887654444444 33332 34577766655433 2355555 66655530 000 0
Q ss_pred CCCCchHHHHHHHHHHHhhHHHHHHHHhhcCCcEEEEcC-CCcccccccccccCCeeEEEec
Q 037721 83 TSEMTPHMAELLKQALDLMQPQIKTLLSQLKPHFVFFDF-THYWLPGLVGSQLGIKTVNFSV 143 (465)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~vi~D~-~~~~~~~~~A~~~giP~v~~~~ 143 (465)
. + ....+.+.+.+++.+||++|.-. .-.-...+ -+.....++.+++
T Consensus 73 -----~------r---~~~d~~~~~~l~~~~~Dlivlagy~~iL~~~~-l~~~~~~~iNiHp 119 (215)
T 3da8_A 73 -----S------R---DAWDVAITAATAAHEPDLVVSAGFMRILGPQF-LSRFYGRTLNTHP 119 (215)
T ss_dssp -----S------H---HHHHHHHHHHHHTTCCSEEEEEECCSCCCHHH-HHHHTTTEEEEES
T ss_pred -----c------h---hhhhHHHHHHHHhhCCCEEEEcCchhhCCHHH-HhhccCCeEEeCc
Confidence 0 0 11235677888999999977644 22223333 4444445666655
No 86
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=62.12 E-value=8.4 Score=31.74 Aligned_cols=42 Identities=14% Similarity=0.062 Sum_probs=36.7
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCC
Q 037721 8 ADQLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGN 49 (465)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~ 49 (465)
.++.+|++.+.++-+|-....-++..|...|++|++....-.
T Consensus 16 ~~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p 57 (161)
T 2yxb_A 16 RRRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQT 57 (161)
T ss_dssp CCSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCC
T ss_pred CCCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCC
Confidence 357899999999999999999999999999999999875433
No 87
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=61.79 E-value=19 Score=31.27 Aligned_cols=105 Identities=7% Similarity=0.083 Sum_probs=58.3
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHh-CCCEEEEEeCCC-Ch---hhhhcccCCCCCeeEEEccCCCCCCCCCCCCCC
Q 037721 9 DQLHVVMFPWFAFGHISPFVQLSNKLSL-HGVKVSFFSAPG-NI---PRIKSSLNLTPMADIIPLQIPHVDGLPPGLDST 83 (465)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~-rGh~V~~~~~~~-~~---~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~ 83 (465)
+++||+++..+..+.+.-+ .++..+ .+++|..+.+.. .. +..++.| +.+..++ ...++.
T Consensus 4 ~~~riavl~SG~Gsnl~al---l~~~~~~~~~eI~~Vis~~~~a~~~~~A~~~g-----Ip~~~~~---~~~~~~----- 67 (215)
T 3tqr_A 4 EPLPIVVLISGNGTNLQAI---IGAIQKGLAIEIRAVISNRADAYGLKRAQQAD-----IPTHIIP---HEEFPS----- 67 (215)
T ss_dssp CCEEEEEEESSCCHHHHHH---HHHHHTTCSEEEEEEEESCTTCHHHHHHHHTT-----CCEEECC---GGGSSS-----
T ss_pred CCcEEEEEEeCCcHHHHHH---HHHHHcCCCCEEEEEEeCCcchHHHHHHHHcC-----CCEEEeC---ccccCc-----
Confidence 4678988877755444444 344433 367888766532 22 2455666 7776664 011100
Q ss_pred CCCchHHHHHHHHHHHhhHHHHHHHHhhcCCcEEEEcCCC-cccccccccccCCeeEEEecc
Q 037721 84 SEMTPHMAELLKQALDLMQPQIKTLLSQLKPHFVFFDFTH-YWLPGLVGSQLGIKTVNFSVF 144 (465)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~vi~D~~~-~~~~~~~A~~~giP~v~~~~~ 144 (465)
+. ...+.+.+.+++.+||++|.-.+. .-...+ -+.....++.++++
T Consensus 68 -----------r~---~~d~~~~~~l~~~~~Dliv~agy~~il~~~~-l~~~~~~~iNiHpS 114 (215)
T 3tqr_A 68 -----------RT---DFESTLQKTIDHYDPKLIVLAGFMRKLGKAF-VSHYSGRMINIHPS 114 (215)
T ss_dssp -----------HH---HHHHHHHHHHHTTCCSEEEESSCCSCCCHHH-HHHTTTSEEEEESS
T ss_pred -----------hh---HhHHHHHHHHHhcCCCEEEEccchhhCCHHH-HhhccCCeEEeCcc
Confidence 00 123467788899999998875532 222234 44455557776653
No 88
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=61.66 E-value=40 Score=29.01 Aligned_cols=106 Identities=11% Similarity=0.071 Sum_probs=58.3
Q ss_pred CCCCcEEEEecCCCccCHHHHHHHHHHHHhCC--CEEEEEeCCC-C---hhhhhcccCCCCCeeEEEccCCCCCCCCCCC
Q 037721 7 EADQLHVVMFPWFAFGHISPFVQLSNKLSLHG--VKVSFFSAPG-N---IPRIKSSLNLTPMADIIPLQIPHVDGLPPGL 80 (465)
Q Consensus 7 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rG--h~V~~~~~~~-~---~~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~ 80 (465)
+|.++||+++..++.+. +.+|.+++.+.+ ++|..+.+.. . .+..++.| +.+..++ ...+..
T Consensus 4 ~m~~~ri~vl~SG~gsn---l~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~g-----Ip~~~~~---~~~~~~-- 70 (209)
T 4ds3_A 4 SMKRNRVVIFISGGGSN---MEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAAG-----IATQVFK---RKDFAS-- 70 (209)
T ss_dssp --CCEEEEEEESSCCHH---HHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHTT-----CCEEECC---GGGSSS--
T ss_pred cCCCccEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHcC-----CCEEEeC---ccccCC--
Confidence 46678998887775443 445555665543 6777766532 2 22455666 7766654 011100
Q ss_pred CCCCCCchHHHHHHHHHHHhhHHHHHHHHhhcCCcEEEEcCCC-cccccccccccCCeeEEEec
Q 037721 81 DSTSEMTPHMAELLKQALDLMQPQIKTLLSQLKPHFVFFDFTH-YWLPGLVGSQLGIKTVNFSV 143 (465)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~vi~D~~~-~~~~~~~A~~~giP~v~~~~ 143 (465)
+. ...+.+.+.+++.+||++|.-.+. .-...+ -+.....++.+++
T Consensus 71 --------------r~---~~d~~~~~~l~~~~~Dliv~agy~~il~~~~-l~~~~~~~iNiHp 116 (209)
T 4ds3_A 71 --------------KE---AHEDAILAALDVLKPDIICLAGYMRLLSGRF-IAPYEGRILNIHP 116 (209)
T ss_dssp --------------HH---HHHHHHHHHHHHHCCSEEEESSCCSCCCHHH-HGGGTTCEEEEES
T ss_pred --------------HH---HHHHHHHHHHHhcCCCEEEEeccccCcCHHH-HhhccCCeEEECC
Confidence 01 123567788888999998865532 222334 4445555777655
No 89
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=61.25 E-value=28 Score=32.15 Aligned_cols=34 Identities=15% Similarity=0.106 Sum_probs=24.0
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 037721 9 DQLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAP 47 (465)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~ 47 (465)
+++||+|+..+.++ ...-++|.+.||+|..+.+.
T Consensus 2 ~~mrIvf~Gt~~fa-----~~~L~~L~~~~~~i~~Vvt~ 35 (314)
T 1fmt_A 2 ESLRIIFAGTPDFA-----ARHLDALLSSGHNVVGVFTQ 35 (314)
T ss_dssp CCCEEEEEECSHHH-----HHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEEecCHHH-----HHHHHHHHHCCCcEEEEEeC
Confidence 35799999887433 34456777789999877665
No 90
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=61.16 E-value=48 Score=27.27 Aligned_cols=142 Identities=12% Similarity=0.128 Sum_probs=75.8
Q ss_pred CeEEEEEeCCcccCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhhhhhcCCCceEEecccchHhhhcc
Q 037721 270 KSVIYCSFGSETFLTVDQIKELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRH 349 (465)
Q Consensus 270 ~~~v~vs~GS~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~ 349 (465)
++.|-|-+||.+ +.+..++....|+..|+++=+.+-. ....|+.+.+ |+-.. ..
T Consensus 6 ~~~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~S----------aHR~p~~~~~-----------~~~~a---~~ 59 (169)
T 3trh_A 6 KIFVAILMGSDS--DLSTMETAFTELKSLGIPFEAHILS----------AHRTPKETVE-----------FVENA---DN 59 (169)
T ss_dssp CCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECC----------TTTSHHHHHH-----------HHHHH---HH
T ss_pred CCcEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEc----------ccCCHHHHHH-----------HHHHH---Hh
Confidence 446777788865 5667777888888888886555443 2344443321 11110 01
Q ss_pred ccceeecccCChhhHHHHH---HhCCceeeccccc-cchhhH--HHHhh--hhcceEE-eeecCCCCccCHHHHHHHHHH
Q 037721 350 ESVGCYVCHSGFSSVTEAV---ISDCQLVLLPLKG-DQFLNS--KLVAG--DLKAGVE-VNRRDHDGHFGKEDIFKAVKT 420 (465)
Q Consensus 350 ~~~~~~ItHgG~~s~~Eal---~~GvP~l~~P~~~-DQ~~na--~~v~~--~~G~G~~-l~~~~~~~~~~~~~l~~ai~~ 420 (465)
..++.+|.-.|...-+-.+ ..-+|+|.+|... +-.... .-+.+ . |+.+. +...+ .+..++.-+...|-.
T Consensus 60 ~g~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~-GvPVatV~I~~-a~~~nAa~lAa~Il~ 137 (169)
T 3trh_A 60 RGCAVFIAAAGLAAHLAGTIAAHTLKPVIGVPMAGGSLGGLDALLSTVQMPG-GVPVACTAIGK-AGAKNAAILAAQIIA 137 (169)
T ss_dssp TTEEEEEEEECSSCCHHHHHHHTCSSCEEEEECCCSTTTTHHHHHHHHCCCT-TSCCEECCSTH-HHHHHHHHHHHHHHH
T ss_pred CCCcEEEEECChhhhhHHHHHhcCCCCEEEeecCCCCCCCHHHHHHhhcCCC-CCceEEEecCC-ccchHHHHHHHHHHc
Confidence 1233388877754333322 3358999999853 211111 22233 3 44321 11110 012455555555544
Q ss_pred hhcccCCcchHHHHHHHHHHHHHHHc
Q 037721 421 VMVDVNKEPGASIRANQKWWREFLLN 446 (465)
Q Consensus 421 ll~~~~~~~~~~~~~~a~~l~~~~~~ 446 (465)
+ . |++++++.+..++.+++
T Consensus 138 ~-~------d~~l~~kl~~~r~~~~~ 156 (169)
T 3trh_A 138 L-Q------DKSIAQKLVQQRTAKRE 156 (169)
T ss_dssp T-T------CHHHHHHHHHHHHHHHH
T ss_pred C-C------CHHHHHHHHHHHHHHHH
Confidence 3 4 68899999988888864
No 91
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=60.57 E-value=17 Score=30.36 Aligned_cols=78 Identities=21% Similarity=0.121 Sum_probs=43.5
Q ss_pred EEecccch-HhhhccccceeecccCChhhHHH---HHHhCCceeeccccccchhhHHHHhhhhcceEEeeecCCCCccCH
Q 037721 336 VHTGWVQQ-QLILRHESVGCYVCHSGFSSVTE---AVISDCQLVLLPLKGDQFLNSKLVAGDLKAGVEVNRRDHDGHFGK 411 (465)
Q Consensus 336 ~~~~~~pq-~~vL~~~~~~~~ItHgG~~s~~E---al~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~ 411 (465)
+++++.+. ..++...+-..++--||.||+.| ++.+++|++.+|.+. .....+... -....... -++
T Consensus 92 i~~~~~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~-~~~~i~~~------~~~ 161 (176)
T 2iz6_A 92 IVTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSL-DAGLVHVA------ADV 161 (176)
T ss_dssp EECCCCSSSCCCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHH-CTTTEEEE------SSH
T ss_pred EEcCCHHHHHHHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChh-hcCeEEEc------CCH
Confidence 34455553 33343333334666788887655 567999999999843 111122222 22222222 378
Q ss_pred HHHHHHHHHhhc
Q 037721 412 EDIFKAVKTVMV 423 (465)
Q Consensus 412 ~~l~~ai~~ll~ 423 (465)
+++.+.+.+.+.
T Consensus 162 ~e~~~~l~~~~~ 173 (176)
T 2iz6_A 162 AGAIAAVKQLLA 173 (176)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888888777664
No 92
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=59.96 E-value=48 Score=30.51 Aligned_cols=34 Identities=15% Similarity=-0.013 Sum_probs=25.5
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 037721 10 QLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPG 48 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~ 48 (465)
++||+|+-.|.++- ..-++|.+.||+|..+.+..
T Consensus 2 ~mrivf~Gtp~fa~-----~~L~~L~~~~~~v~~Vvt~p 35 (314)
T 3tqq_A 2 SLKIVFAGTPQFAV-----PTLRALIDSSHRVLAVYTQP 35 (314)
T ss_dssp CCEEEEEECSGGGH-----HHHHHHHHSSSEEEEEECCC
T ss_pred CcEEEEECCCHHHH-----HHHHHHHHCCCeEEEEEeCC
Confidence 46999998886653 34577888999998877654
No 93
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=59.53 E-value=12 Score=32.14 Aligned_cols=43 Identities=12% Similarity=-0.183 Sum_probs=37.4
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChh
Q 037721 9 DQLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIP 51 (465)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~ 51 (465)
++.+|++.+.++-.|-....-++..|..+|++|+++...-..+
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~ 129 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPG 129 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHH
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHH
Confidence 4568999999999999999999999999999999987654333
No 94
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=58.79 E-value=73 Score=25.96 Aligned_cols=138 Identities=9% Similarity=0.030 Sum_probs=73.6
Q ss_pred eEEEEEeCCcccCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhhhhhcCCCceEEecccchHhhhccc
Q 037721 271 SVIYCSFGSETFLTVDQIKELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRHE 350 (465)
Q Consensus 271 ~~v~vs~GS~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~~ 350 (465)
+.|-|-+||.+ +.+..++....++..|.++=+.+-+ ....|+.+.+ |+...+ ..-
T Consensus 3 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~s----------aHR~p~~~~~-----------~~~~a~--~~~ 57 (159)
T 3rg8_A 3 PLVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGS----------AHKTAEHVVS-----------MLKEYE--ALD 57 (159)
T ss_dssp CEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECC----------TTTCHHHHHH-----------HHHHHH--TSC
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEc----------ccCCHHHHHH-----------HHHHhh--hcC
Confidence 45667778755 5667777778888888876544433 2344543321 111111 000
Q ss_pred cceeecccCChhhHHHH---HHhCCceeeccccc---cchhhHHHHhhh-hcceEEeeecCCCCccCHHHHHHHHHHhhc
Q 037721 351 SVGCYVCHSGFSSVTEA---VISDCQLVLLPLKG---DQFLNSKLVAGD-LKAGVEVNRRDHDGHFGKEDIFKAVKTVMV 423 (465)
Q Consensus 351 ~~~~~ItHgG~~s~~Ea---l~~GvP~l~~P~~~---DQ~~na~~v~~~-~G~G~~l~~~~~~~~~~~~~l~~ai~~ll~ 423 (465)
.++.+|.-.|...-+-. -..-+|+|.+|... +-.+ -.-+.+. -|+.+.--. +..++.-+...|-.+ .
T Consensus 58 ~~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~d-LlS~vqmp~GvpVatv~----~~~nAa~lA~~Il~~-~ 131 (159)
T 3rg8_A 58 RPKLYITIAGRSNALSGFVDGFVKGATIACPPPSDSFAGAD-IYSSLRMPSGISPALVL----EPKNAALLAARIFSL-Y 131 (159)
T ss_dssp SCEEEEEECCSSCCHHHHHHHHSSSCEEECCCCCCGGGGTH-HHHHHCCCTTCCCEECC----SHHHHHHHHHHHHTT-T
T ss_pred CCcEEEEECCchhhhHHHHHhccCCCEEEeeCCCCCCCCcc-HHHHHhCCCCCceEEec----CchHHHHHHHHHHhC-C
Confidence 23348887775432222 23568999999642 1122 1222221 044332111 135666666555433 3
Q ss_pred ccCCcchHHHHHHHHHHHHHHH
Q 037721 424 DVNKEPGASIRANQKWWREFLL 445 (465)
Q Consensus 424 ~~~~~~~~~~~~~a~~l~~~~~ 445 (465)
|++++++.+..++..+
T Consensus 132 ------d~~l~~kl~~~r~~~~ 147 (159)
T 3rg8_A 132 ------DKEIADSVKSYMESNA 147 (159)
T ss_dssp ------CHHHHHHHHHHHHHHH
T ss_pred ------CHHHHHHHHHHHHHHH
Confidence 6889998888888775
No 95
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=58.25 E-value=71 Score=26.31 Aligned_cols=142 Identities=13% Similarity=0.151 Sum_probs=77.3
Q ss_pred CeEEEEEeCCcccCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhhhhhcCCCceEEecccchHhhhcc
Q 037721 270 KSVIYCSFGSETFLTVDQIKELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRH 349 (465)
Q Consensus 270 ~~~v~vs~GS~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~ 349 (465)
+|.|-|-+||.+ +.+..++....|+..|+++=+.+-. ....|+.+.+ |..+ ...
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~S----------aHR~p~~l~~-----------~~~~---a~~ 64 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVS----------AHRTPDYMFE-----------YAET---ARE 64 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC----------TTTSHHHHHH-----------HHHH---TTT
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEe----------ccCCHHHHHH-----------HHHH---HHh
Confidence 567888888866 6677777888888888886544433 2344443321 1100 000
Q ss_pred ccceeecccCChhhHHHHH---HhCCceeecccccc--chhhH-HHHhh--hhcceEE-eeecCCCCccCHHHHHHHHHH
Q 037721 350 ESVGCYVCHSGFSSVTEAV---ISDCQLVLLPLKGD--QFLNS-KLVAG--DLKAGVE-VNRRDHDGHFGKEDIFKAVKT 420 (465)
Q Consensus 350 ~~~~~~ItHgG~~s~~Eal---~~GvP~l~~P~~~D--Q~~na-~~v~~--~~G~G~~-l~~~~~~~~~~~~~l~~ai~~ 420 (465)
..++.+|.=.|...-+-.+ ..-+|+|.+|.... +-..+ .-+.+ . |+.+. +...+ .+..++.-+...|..
T Consensus 65 ~g~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~daLlSivqmP~-GvpVatV~I~~-a~~~nAallAaqIla 142 (170)
T 1xmp_A 65 RGLKVIIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIVQMPG-GVPVATVAIGK-AGSTNAGLLAAQILG 142 (170)
T ss_dssp TTCCEEEEEEESSCCHHHHHHTTCCSCEEEEEECCTTTTTHHHHHHHHCCCT-TCCCEECCSSH-HHHHHHHHHHHHHHH
T ss_pred CCCcEEEEECCchhhhHHHHHhccCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCeeEEEecCC-cchHHHHHHHHHHHc
Confidence 1123377776654333322 24689999998542 22222 12334 3 55421 11110 012566666666653
Q ss_pred hhcccCCcchHHHHHHHHHHHHHHHc
Q 037721 421 VMVDVNKEPGASIRANQKWWREFLLN 446 (465)
Q Consensus 421 ll~~~~~~~~~~~~~~a~~l~~~~~~ 446 (465)
+. |++++++.+..++.+++
T Consensus 143 -~~------d~~l~~kl~~~r~~~~~ 161 (170)
T 1xmp_A 143 -SF------HDDIHDALELRREAIEK 161 (170)
T ss_dssp -TT------CHHHHHHHHHHHHHHHH
T ss_pred -cC------CHHHHHHHHHHHHHHHH
Confidence 34 68899999988888764
No 96
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=58.25 E-value=7.9 Score=33.13 Aligned_cols=44 Identities=16% Similarity=-0.017 Sum_probs=36.4
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhC-CCEEEEEeCCCChhhhhc
Q 037721 11 LHVVMFPWFAFGHISPFVQLSNKLSLH-GVKVSFFSAPGNIPRIKS 55 (465)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~r-Gh~V~~~~~~~~~~~i~~ 55 (465)
+||++--.|+.|-.. ...+.+.|+++ |++|.++.++.....+..
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~~ 45 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIEL 45 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhHH
Confidence 378887778777665 89999999999 999999999887777653
No 97
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=57.81 E-value=12 Score=32.10 Aligned_cols=46 Identities=15% Similarity=-0.057 Sum_probs=36.6
Q ss_pred CCcEEEEecCCCccCHH-HHHHHHHHHHhCCCEEEEEeCCCChhhhhc
Q 037721 9 DQLHVVMFPWFAFGHIS-PFVQLSNKLSLHGVKVSFFSAPGNIPRIKS 55 (465)
Q Consensus 9 ~~~~il~~~~~~~GH~~-p~l~La~~L~~rGh~V~~~~~~~~~~~i~~ 55 (465)
+..||++--.|+ +... =.+.+.+.|.++|++|+++.++.....+..
T Consensus 6 ~~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~~i~~ 52 (201)
T 3lqk_A 6 AGKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTVQTTDTK 52 (201)
T ss_dssp TTCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCSCCTTCC
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhHHHHHHH
Confidence 346888877777 4455 789999999999999999999877666543
No 98
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=57.56 E-value=7.8 Score=36.91 Aligned_cols=39 Identities=10% Similarity=0.063 Sum_probs=32.2
Q ss_pred EEEEecC-CCccCHHHHHHHHHHHHhCCCEEEEEeCCCChh
Q 037721 12 HVVMFPW-FAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIP 51 (465)
Q Consensus 12 ~il~~~~-~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~ 51 (465)
+|++++. ++-|-..-...||..|+++|++|.++.. ....
T Consensus 3 ~i~~~~gkGG~GKTt~a~~la~~la~~g~~vllvd~-~~~~ 42 (374)
T 3igf_A 3 LILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAGL-AEPV 42 (374)
T ss_dssp EEEEEECSBHHHHHHHHHHHHHHHHHTTCCEEEEEC-SCSH
T ss_pred EEEEEeCCCCCcHHHHHHHHHHHHHHCCCCeEEEeC-CCCC
Confidence 5666555 6899999999999999999999999988 4433
No 99
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=57.42 E-value=17 Score=31.80 Aligned_cols=41 Identities=17% Similarity=0.100 Sum_probs=36.1
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 037721 8 ADQLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPG 48 (465)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~ 48 (465)
.-+++|++..-||-|-..-++.+|..|+++|++|.++..+.
T Consensus 4 ~g~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 4 RGRLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CCCEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CceEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 34678899999999999999999999999999998877654
No 100
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=57.41 E-value=16 Score=32.72 Aligned_cols=40 Identities=15% Similarity=-0.106 Sum_probs=36.0
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 037721 8 ADQLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAP 47 (465)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~ 47 (465)
.++.+|++.+.++-.|-....-++..|..+|++|++....
T Consensus 121 ~~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~ 160 (258)
T 2i2x_B 121 KTKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRD 160 (258)
T ss_dssp CCSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 3467899999999999999999999999999999988754
No 101
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=57.29 E-value=62 Score=29.80 Aligned_cols=36 Identities=17% Similarity=0.123 Sum_probs=26.3
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCC
Q 037721 9 DQLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGN 49 (465)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~ 49 (465)
+.+||+|+-.|.++- ..-++|.+.||+|..+.+...
T Consensus 3 ~mmrIvf~Gtp~fa~-----~~L~~L~~~~~~v~~Vvt~pd 38 (317)
T 3rfo_A 3 AMIKVVFMGTPDFSV-----PVLRRLIEDGYDVIGVVTQPD 38 (317)
T ss_dssp TTSEEEEECCSTTHH-----HHHHHHHHTTCEEEEEECCCC
T ss_pred CceEEEEEeCCHHHH-----HHHHHHHHCCCcEEEEEeCCC
Confidence 457999998886543 345677788999988877543
No 102
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=56.30 E-value=53 Score=28.23 Aligned_cols=102 Identities=13% Similarity=0.053 Sum_probs=56.7
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCC-Ch---hhhhcccCCCCCeeEEEccCCCCCCCCCCCCCCC
Q 037721 11 LHVVMFPWFAFGHISPFVQLSNKLSLH--GVKVSFFSAPG-NI---PRIKSSLNLTPMADIIPLQIPHVDGLPPGLDSTS 84 (465)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~V~~~~~~~-~~---~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~ 84 (465)
+||+++-.++.+ -+..+.++|.+. +|+|..+.+.. .. +.+++.| +.+..++ ...+ .
T Consensus 4 ~ki~vl~sG~g~---~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~g-----Ip~~~~~---~~~~----~--- 65 (212)
T 3av3_A 4 KRLAVFASGSGT---NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAAREN-----VPAFVFS---PKDY----P--- 65 (212)
T ss_dssp EEEEEECCSSCH---HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTT-----CCEEECC---GGGS----S---
T ss_pred cEEEEEEECCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcC-----CCEEEeC---cccc----c---
Confidence 477777666533 355666777776 68887666542 22 2345555 6665553 0111 0
Q ss_pred CCchHHHHHHHHHHHhhHHHHHHHHhhcCCcEEEEcCC-CcccccccccccCCeeEEEec
Q 037721 85 EMTPHMAELLKQALDLMQPQIKTLLSQLKPHFVFFDFT-HYWLPGLVGSQLGIKTVNFSV 143 (465)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~vi~D~~-~~~~~~~~A~~~giP~v~~~~ 143 (465)
+ . +...+.+.+.+++.+||++|.-.+ -.-...+ -+.....++.+++
T Consensus 66 ~---------~---~~~~~~~~~~l~~~~~Dliv~a~y~~il~~~~-l~~~~~~~iNiHp 112 (212)
T 3av3_A 66 S---------K---AAFESEILRELKGRQIDWIALAGYMRLIGPTL-LSAYEGKIVNIHP 112 (212)
T ss_dssp S---------H---HHHHHHHHHHHHHTTCCEEEESSCCSCCCHHH-HHHTTTCEEEEES
T ss_pred c---------h---hhhHHHHHHHHHhcCCCEEEEchhhhhCCHHH-HhhhcCCEEEEec
Confidence 0 0 112345677888899999887543 2222234 4455556777765
No 103
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=55.88 E-value=5.8 Score=33.90 Aligned_cols=46 Identities=2% Similarity=-0.112 Sum_probs=36.7
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhc
Q 037721 9 DQLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKS 55 (465)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~ 55 (465)
+..||++.-.|+.|=.. ...+.+.|.++|++|.++.++.....+..
T Consensus 7 ~~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~fi~~ 52 (194)
T 1p3y_1 7 KDKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAEDLIPA 52 (194)
T ss_dssp GGCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHHHSCH
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHHHHHH
Confidence 35688888888776664 78999999999999999999877666543
No 104
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=55.77 E-value=85 Score=26.17 Aligned_cols=140 Identities=14% Similarity=0.157 Sum_probs=73.8
Q ss_pred CeEEEEEeCCcccCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhhhhhcCCCceEEecccchHhhhcc
Q 037721 270 KSVIYCSFGSETFLTVDQIKELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRH 349 (465)
Q Consensus 270 ~~~v~vs~GS~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~ 349 (465)
-|.|-|-+||.+ +.+..++....|+..|+++=+.+-. ....|+.+.+ |+.+. ..
T Consensus 13 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~S----------aHR~p~~l~~-----------~~~~a---~~ 66 (183)
T 1o4v_A 13 VPRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVS----------AHRTPDRMFE-----------YAKNA---EE 66 (183)
T ss_dssp -CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECC----------TTTCHHHHHH-----------HHHHT---TT
T ss_pred CCeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEc----------ccCCHHHHHH-----------HHHHH---Hh
Confidence 346778888865 5667777788888888876544433 2344443321 11000 00
Q ss_pred ccceeecccCChh----hHHHHHHhCCceeecccccc--chhhHH-HHhhh-hcceEE-eeecCCCCccCHHHHHHHHHH
Q 037721 350 ESVGCYVCHSGFS----SVTEAVISDCQLVLLPLKGD--QFLNSK-LVAGD-LKAGVE-VNRRDHDGHFGKEDIFKAVKT 420 (465)
Q Consensus 350 ~~~~~~ItHgG~~----s~~Eal~~GvP~l~~P~~~D--Q~~na~-~v~~~-~G~G~~-l~~~~~~~~~~~~~l~~ai~~ 420 (465)
..++.+|.=.|.. ++.-+ ..-+|+|.+|.... .-..+. -+.+. -|+.+. +... +..++.-+...|..
T Consensus 67 ~g~~ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlSivqmP~GvpVatV~Id---~~~nAa~lAaqIla 142 (183)
T 1o4v_A 67 RGIEVIIAGAGGAAHLPGMVAS-ITHLPVIGVPVKTSTLNGLDSLFSIVQMPGGVPVATVAIN---NAKNAGILAASILG 142 (183)
T ss_dssp TTCCEEEEEEESSCCHHHHHHH-HCSSCEEEEEECCTTTTTHHHHHHHHTCCTTCCCEECCTT---CHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCcccccHHHHHh-ccCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEecC---CchHHHHHHHHHHh
Confidence 1122377666643 33333 36789999997442 222221 12221 032221 2111 13566666666653
Q ss_pred hhcccCCcchHHHHHHHHHHHHHHHc
Q 037721 421 VMVDVNKEPGASIRANQKWWREFLLN 446 (465)
Q Consensus 421 ll~~~~~~~~~~~~~~a~~l~~~~~~ 446 (465)
+. +++++++.+..++..++
T Consensus 143 -~~------d~~l~~kL~~~r~~~~~ 161 (183)
T 1o4v_A 143 -IK------YPEIARKVKEYKERMKR 161 (183)
T ss_dssp -TT------CHHHHHHHHHHHHHHHH
T ss_pred -cC------CHHHHHHHHHHHHHHHH
Confidence 34 68888888888877764
No 105
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=54.87 E-value=93 Score=26.67 Aligned_cols=101 Identities=11% Similarity=0.086 Sum_probs=56.8
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCC-C---hhhhhcccCCCCCeeEEEccCCCCCCCCCCCCCCCC
Q 037721 12 HVVMFPWFAFGHISPFVQLSNKLSLH--GVKVSFFSAPG-N---IPRIKSSLNLTPMADIIPLQIPHVDGLPPGLDSTSE 85 (465)
Q Consensus 12 ~il~~~~~~~GH~~p~l~La~~L~~r--Gh~V~~~~~~~-~---~~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 85 (465)
||+++..+..+ -+-+|.+.+.+. +|+|..+.+.. . .+..++.| +.+..++ ...+ ..
T Consensus 2 ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~g-----Ip~~~~~---~~~~----~~--- 63 (212)
T 1jkx_A 2 NIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAG-----IATHTLI---ASAF----DS--- 63 (212)
T ss_dssp EEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHTT-----CEEEECC---GGGC----SS---
T ss_pred EEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHcC-----CcEEEeC---cccc----cc---
Confidence 67777776443 355666777665 58877665443 2 23355555 7766653 0111 00
Q ss_pred CchHHHHHHHHHHHhhHHHHHHHHhhcCCcEEEEcCC-CcccccccccccCCeeEEEec
Q 037721 86 MTPHMAELLKQALDLMQPQIKTLLSQLKPHFVFFDFT-HYWLPGLVGSQLGIKTVNFSV 143 (465)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~vi~D~~-~~~~~~~~A~~~giP~v~~~~ 143 (465)
+ +...+.+.+.+++.+||++|.-.+ -.-...+ -+.....++.+++
T Consensus 64 ---------r---~~~~~~~~~~l~~~~~Dliv~agy~~il~~~~-l~~~~~~~iNiHp 109 (212)
T 1jkx_A 64 ---------R---EAYDRELIHEIDMYAPDVVVLAGFMRILSPAF-VSHYAGRLLNIHP 109 (212)
T ss_dssp ---------H---HHHHHHHHHHHGGGCCSEEEESSCCSCCCHHH-HHHTTTSEEEEES
T ss_pred ---------h---hhccHHHHHHHHhcCCCEEEEeChhhhCCHHH-HhhccCCEEEEcc
Confidence 0 112345678889999999887653 2222234 4445556777655
No 106
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=54.63 E-value=67 Score=26.77 Aligned_cols=141 Identities=11% Similarity=0.181 Sum_probs=76.5
Q ss_pred CeEEEEEeCCcccCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhhhhhcCCCceEEecccchHhhhcc
Q 037721 270 KSVIYCSFGSETFLTVDQIKELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRH 349 (465)
Q Consensus 270 ~~~v~vs~GS~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~ 349 (465)
.+.|-|-+||.+ +.+..++....|+..|+++=+.+-. ....|+.+.+ |+.+ ...
T Consensus 21 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~S----------aHR~p~~l~~-----------~~~~---a~~ 74 (182)
T 1u11_A 21 APVVGIIMGSQS--DWETMRHADALLTELEIPHETLIVS----------AHRTPDRLAD-----------YART---AAE 74 (182)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC----------TTTCHHHHHH-----------HHHH---TTT
T ss_pred CCEEEEEECcHH--HHHHHHHHHHHHHHcCCCeEEEEEc----------ccCCHHHHHH-----------HHHH---HHh
Confidence 345777788865 6677777888888888886544433 2344443221 1100 000
Q ss_pred ccceeecccCChh----hHHHHHHhCCceeecccccc--chhhH-HHHhh--hhcceEE-eeecCCCCccCHHHHHHHHH
Q 037721 350 ESVGCYVCHSGFS----SVTEAVISDCQLVLLPLKGD--QFLNS-KLVAG--DLKAGVE-VNRRDHDGHFGKEDIFKAVK 419 (465)
Q Consensus 350 ~~~~~~ItHgG~~----s~~Eal~~GvP~l~~P~~~D--Q~~na-~~v~~--~~G~G~~-l~~~~~~~~~~~~~l~~ai~ 419 (465)
..++.+|.-.|.. ++.-+ ..-+|+|.+|.... +-..+ .-+.+ . |+.+. +...+ .+..++.-+...|.
T Consensus 75 ~g~~ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlSivqmP~-GvpVatV~I~~-a~~~nAallAaqIl 151 (182)
T 1u11_A 75 RGLNVIIAGAGGAAHLPGMCAA-WTRLPVLGVPVESRALKGMDSLLSIVQMPG-GVPVGTLAIGA-SGAKNAALLAASIL 151 (182)
T ss_dssp TTCCEEEEEEESSCCHHHHHHH-HCSSCEEEEEECCTTTTTHHHHHHHHCCCT-TSCCEECCSSH-HHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCchhhhHHHHHh-ccCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCceEEEecCC-ccchHHHHHHHHHH
Confidence 1123377766643 33333 35799999998542 22222 22344 4 55532 22110 01245666665554
Q ss_pred HhhcccCCcchHHHHHHHHHHHHHHHc
Q 037721 420 TVMVDVNKEPGASIRANQKWWREFLLN 446 (465)
Q Consensus 420 ~ll~~~~~~~~~~~~~~a~~l~~~~~~ 446 (465)
-+. |++++++.+..++..++
T Consensus 152 -a~~------d~~l~~kL~~~r~~~~~ 171 (182)
T 1u11_A 152 -ALY------NPALAARLETWRALQTA 171 (182)
T ss_dssp -GGG------CHHHHHHHHHHHHHHHH
T ss_pred -ccC------CHHHHHHHHHHHHHHHH
Confidence 344 78999999998888764
No 107
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=53.54 E-value=13 Score=31.53 Aligned_cols=44 Identities=16% Similarity=0.024 Sum_probs=37.3
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhc
Q 037721 11 LHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKS 55 (465)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~ 55 (465)
+||++.-.|+.|-. =...+.+.|.++|++|.++.++.....+..
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i~~ 45 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVLKE 45 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHhhH
Confidence 37989888888854 679999999999999999999988777765
No 108
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=53.48 E-value=60 Score=26.81 Aligned_cols=142 Identities=12% Similarity=0.133 Sum_probs=73.8
Q ss_pred CeEEEEEeCCcccCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhhhhhcCCCceEEecccchHhhhcc
Q 037721 270 KSVIYCSFGSETFLTVDQIKELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRH 349 (465)
Q Consensus 270 ~~~v~vs~GS~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~ 349 (465)
.|.|-|-+||.+ +.+..++....|+..|+++=+.+-. ....|+.+.+ |+-.. ..
T Consensus 12 ~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~s----------aHR~p~~l~~-----------~~~~a---~~ 65 (173)
T 4grd_A 12 APLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVS----------AHRMPDEMFD-----------YAEKA---RE 65 (173)
T ss_dssp SCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC----------TTTSHHHHHH-----------HHHHH---TT
T ss_pred CCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEc----------cccCHHHHHH-----------HHHHH---Hh
Confidence 567888888866 5667777888888888886544443 2344543321 11100 01
Q ss_pred ccceeecccCChh----hHHHHHHhCCceeecccccc---chhhHHHHhhhhcceEEeeecC--CCCccCHHHHHHHHHH
Q 037721 350 ESVGCYVCHSGFS----SVTEAVISDCQLVLLPLKGD---QFLNSKLVAGDLKAGVEVNRRD--HDGHFGKEDIFKAVKT 420 (465)
Q Consensus 350 ~~~~~~ItHgG~~----s~~Eal~~GvP~l~~P~~~D---Q~~na~~v~~~~G~G~~l~~~~--~~~~~~~~~l~~ai~~ 420 (465)
..++.+|.-.|.- ++.- -..-+|+|.+|.... -.+--.-+.++ =-|+-+-.-. .++..++.-+...|-
T Consensus 66 ~g~~ViIa~AG~aahLpgvvA-~~t~~PVIgVPv~~~~l~G~dsLlSivqM-P~Gvpvatv~i~~~~a~NAallA~~IL- 142 (173)
T 4grd_A 66 RGLRAIIAGAGGAAHLPGMLA-AKTTVPVLGVPVASKYLKGVDSLHSIVQM-PKGVPVATFAIGEAGAANAALFAVSIL- 142 (173)
T ss_dssp TTCSEEEEEEESSCCHHHHHH-HHCCSCEEEEEECCTTTTTHHHHHHHHCC-CTTSCCEECCSSHHHHHHHHHHHHHHH-
T ss_pred cCCeEEEEeccccccchhhhe-ecCCCCEEEEEcCCCCCCchhHHHHHHhC-CCCCCceEEecCCcchHHHHHHHHHHH-
Confidence 1222366655532 3333 355799999997432 22212222332 2232222110 001233444444443
Q ss_pred hhcccCCcchHHHHHHHHHHHHHHHc
Q 037721 421 VMVDVNKEPGASIRANQKWWREFLLN 446 (465)
Q Consensus 421 ll~~~~~~~~~~~~~~a~~l~~~~~~ 446 (465)
-+. |++++++.++.+++.++
T Consensus 143 a~~------d~~l~~kl~~~r~~~~~ 162 (173)
T 4grd_A 143 SGN------SVDYANRLAAFRVRQNE 162 (173)
T ss_dssp TTS------CHHHHHHHHHHHHHHHH
T ss_pred cCC------CHHHHHHHHHHHHHHHH
Confidence 234 78899998888887753
No 109
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=53.38 E-value=31 Score=30.41 Aligned_cols=20 Identities=25% Similarity=0.439 Sum_probs=16.4
Q ss_pred hHHHHHHHHhhcCCcEEEEc
Q 037721 101 MQPQIKTLLSQLKPHFVFFD 120 (465)
Q Consensus 101 ~~~~l~~~l~~~~pD~vi~D 120 (465)
....+.++|++.+||+|++-
T Consensus 85 ~~~~l~~~ir~~~PdvV~t~ 104 (242)
T 2ixd_A 85 YIREIVKVIRTYKPKLVFAP 104 (242)
T ss_dssp HHHHHHHHHHHHCCSEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEC
Confidence 45678888999999999864
No 110
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=52.90 E-value=20 Score=30.99 Aligned_cols=45 Identities=9% Similarity=-0.085 Sum_probs=37.8
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChhh
Q 037721 8 ADQLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPR 52 (465)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~ 52 (465)
.++.+|++.+.++-.|-....-++..|..+|++|++....-..+.
T Consensus 90 ~~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~ 134 (215)
T 3ezx_A 90 EEAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNEN 134 (215)
T ss_dssp --CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHH
T ss_pred CCCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHH
Confidence 456899999999999999999999999999999999876544433
No 111
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=52.39 E-value=12 Score=31.56 Aligned_cols=43 Identities=14% Similarity=0.137 Sum_probs=35.2
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhc
Q 037721 12 HVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKS 55 (465)
Q Consensus 12 ~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~ 55 (465)
||++.-.|+.|=. =...+.+.|.++|++|.++.++.....+..
T Consensus 4 ~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~ 46 (181)
T 1g63_A 4 KLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNFINT 46 (181)
T ss_dssp CEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGTSCG
T ss_pred EEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHHHH
Confidence 6888777766655 678999999999999999999987766644
No 112
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=50.88 E-value=15 Score=31.65 Aligned_cols=43 Identities=9% Similarity=-0.181 Sum_probs=30.6
Q ss_pred CcEEEEecCCCccCHHH-HHHHHHHHHhCCCEEEEEeCCCChhhh
Q 037721 10 QLHVVMFPWFAFGHISP-FVQLSNKLSLHGVKVSFFSAPGNIPRI 53 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~p-~l~La~~L~~rGh~V~~~~~~~~~~~i 53 (465)
.+||++.-.|+ +...- ...+.+.|.++|++|.++.++.....+
T Consensus 5 ~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A~~vl 48 (207)
T 3mcu_A 5 GKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTVQSTN 48 (207)
T ss_dssp TCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC------
T ss_pred CCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHHHHHH
Confidence 45888877776 44554 889999999999999999998776444
No 113
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=50.26 E-value=76 Score=25.93 Aligned_cols=140 Identities=9% Similarity=0.149 Sum_probs=73.3
Q ss_pred eEEEEEeCCcccCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhhhhhcCCCceEEecccchHhhhccc
Q 037721 271 SVIYCSFGSETFLTVDQIKELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRHE 350 (465)
Q Consensus 271 ~~v~vs~GS~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~~ 350 (465)
+.|-|-+||.+ +.+..++....|+..|.++=+.+-. ....|+.+.+ |+.. ....
T Consensus 4 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~S----------aHR~p~~~~~-----------~~~~---a~~~ 57 (163)
T 3ors_A 4 MKVAVIMGSSS--DWKIMQESCNMLDYFEIPYEKQVVS----------AHRTPKMMVQ-----------FASE---ARER 57 (163)
T ss_dssp CCEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECC----------TTTSHHHHHH-----------HHHH---TTTT
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEC----------CcCCHHHHHH-----------HHHH---HHhC
Confidence 45667778755 5667777888888888876544433 2344443321 1100 0111
Q ss_pred cceeecccCChh----hHHHHHHhCCceeeccccccc---hhhHHHHhhhhcceE--E-eeecCCCCccCHHHHHHHHHH
Q 037721 351 SVGCYVCHSGFS----SVTEAVISDCQLVLLPLKGDQ---FLNSKLVAGDLKAGV--E-VNRRDHDGHFGKEDIFKAVKT 420 (465)
Q Consensus 351 ~~~~~ItHgG~~----s~~Eal~~GvP~l~~P~~~DQ---~~na~~v~~~~G~G~--~-l~~~~~~~~~~~~~l~~ai~~ 420 (465)
.++.+|.-.|.. ++.-+ ..-+|+|.+|....- .+--.-+.+. --|+ . +...+ .+..++.-+...|-.
T Consensus 58 g~~ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlS~vqm-p~GvPVatV~I~~-a~~~nAa~lAa~Il~ 134 (163)
T 3ors_A 58 GINIIIAGAGGAAHLPGMVAS-LTTLPVIGVPIETKSLKGIDSLLSIVQM-PGGIPVATTAIGA-AGAKNAGILAARMLS 134 (163)
T ss_dssp TCCEEEEEEESSCCHHHHHHH-HCSSCEEEEEECCTTTTTHHHHHHHHTC-CTTSCCEECCSTH-HHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCchhhhHHHHHh-ccCCCEEEeeCCCCCCCCHHHHHHHhhC-CCCCceEEEEcCC-cccHHHHHHHHHHHh
Confidence 123377776653 33333 356899999974321 1111122222 2332 1 11110 012455556555544
Q ss_pred hhcccCCcchHHHHHHHHHHHHHHHc
Q 037721 421 VMVDVNKEPGASIRANQKWWREFLLN 446 (465)
Q Consensus 421 ll~~~~~~~~~~~~~~a~~l~~~~~~ 446 (465)
+ . |++++++.+..++.+++
T Consensus 135 ~-~------d~~l~~kl~~~r~~~~~ 153 (163)
T 3ors_A 135 I-Q------NPSLVEKLNQYESSLIQ 153 (163)
T ss_dssp T-T------CTHHHHHHHHHHHHHHH
T ss_pred C-C------CHHHHHHHHHHHHHHHH
Confidence 3 3 68899988888888763
No 114
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=50.01 E-value=26 Score=33.65 Aligned_cols=96 Identities=9% Similarity=0.047 Sum_probs=51.9
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhcccCCCCCeeEEEccCCCCCCCCCCCCCCCCCch
Q 037721 9 DQLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSSLNLTPMADIIPLQIPHVDGLPPGLDSTSEMTP 88 (465)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 88 (465)
+++|+++++.+.. + . -+.+++++.|++|+++.......... . ...-+++.++ .. .+ ..
T Consensus 4 ~~k~l~Il~~~~~-~-~---~i~~aa~~lG~~vv~v~~~~~~~~~~-~---~~~d~~~~~~-----~~-~d------~~- 61 (425)
T 3vot_A 4 RNKNLAIICQNKH-L-P---FIFEEAERLGLKVTFFYNSAEDFPGN-L---PAVERCVPLP-----LF-ED------EE- 61 (425)
T ss_dssp CCCEEEEECCCTT-C-C---HHHHHHHHTTCEEEEEEETTSCCCCS-C---TTEEEEEEEC-----TT-TC------HH-
T ss_pred CCcEEEEECCChh-H-H---HHHHHHHHCCCEEEEEECCCcccccC-H---hhccEEEecC-----CC-CC------HH-
Confidence 4567888765432 2 2 35677788899999886543221100 0 0012444443 11 11 00
Q ss_pred HHHHHHHHHHHhhHHHHHHHHhhcCCcEEEE--cCCCcccccccccccCCee
Q 037721 89 HMAELLKQALDLMQPQIKTLLSQLKPHFVFF--DFTHYWLPGLVGSQLGIKT 138 (465)
Q Consensus 89 ~~~~~~~~~~~~~~~~l~~~l~~~~pD~vi~--D~~~~~~~~~~A~~~giP~ 138 (465)
. ....+.++.++.++|.|+. |.....+..+ |+.+|+|.
T Consensus 62 ----~-------~~~~~~~~~~~~~id~V~~~~e~~~~~~a~l-~e~lglpg 101 (425)
T 3vot_A 62 ----A-------AMDVVRQTFVEFPFDGVMTLFEPALPFTAKA-AEALNLPG 101 (425)
T ss_dssp ----H-------HHHHHHHHHHHSCCSEEECCCGGGHHHHHHH-HHHTTCSS
T ss_pred ----H-------HHHHHHHhhhhcCCCEEEECCchhHHHHHHH-HHHcCCCC
Confidence 0 1234556667788999985 3323334556 88999983
No 115
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=49.80 E-value=1.1e+02 Score=26.33 Aligned_cols=115 Identities=15% Similarity=0.165 Sum_probs=72.7
Q ss_pred HHHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhhhhhcCCCceEEecccchHhhhccccceeecccCChhhHHHHH
Q 037721 289 KELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRHESVGCYVCHSGFSSVTEAV 368 (465)
Q Consensus 289 ~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~~~~~~~ItHgG~~s~~Eal 368 (465)
.++++.++..+..+++..+. ...+|+.+.+..+..-+-+ |+++ .=..-|...+..|+
T Consensus 79 ~~~~~~l~~~~~Dlivlagy----------~~iL~~~~l~~~~~~~iNi-----------HpSL--LP~yrG~~pi~~Ai 135 (215)
T 3da8_A 79 VAITAATAAHEPDLVVSAGF----------MRILGPQFLSRFYGRTLNT-----------HPAL--LPAFPGTHGVADAL 135 (215)
T ss_dssp HHHHHHHHTTCCSEEEEEEC----------CSCCCHHHHHHHTTTEEEE-----------ESSC--TTSSCSTTHHHHHH
T ss_pred HHHHHHHHhhCCCEEEEcCc----------hhhCCHHHHhhccCCeEEe-----------Cccc--ccCCCCchHHHHHH
Confidence 44778888889999988875 3567887776554433333 4444 33456899999999
Q ss_pred HhCCceeecccc--ccchhhHHHHhhhhcceEEeeecCCCCccCHHHHHHHHHHhhcccCCcchHHHHHHHHHHH
Q 037721 369 ISDCQLVLLPLK--GDQFLNSKLVAGDLKAGVEVNRRDHDGHFGKEDIFKAVKTVMVDVNKEPGASIRANQKWWR 441 (465)
Q Consensus 369 ~~GvP~l~~P~~--~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~a~~l~ 441 (465)
.+|+...++=.+ .+..+.+..+.+. -+.+... -|.++|.+.+.++= -.-+.+..+.+.
T Consensus 136 ~~G~~~tGvTvh~v~~~lD~G~Ii~Q~---~v~I~~~-----dt~~~L~~rl~~~~-------~~ll~~~l~~~~ 195 (215)
T 3da8_A 136 AYGVKVTGATVHLVDAGTDTGPILAQQ---PVPVLDG-----DDEETLHERIKVTE-------RRLLVAAVAALA 195 (215)
T ss_dssp HHTCSEEEEEEEECCSSSSCSCEEEEE---EEECCTT-----CCHHHHHHHHHHHH-------HHHHHHHHHHHH
T ss_pred HcCCCeEEEEEEEEcCCCCCCCEEEEE---EeecCCC-----CCHHHHHHHHHHHH-------HHHHHHHHHHHH
Confidence 999998777753 2444444444433 2223333 58888888876543 244555444443
No 116
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=49.77 E-value=16 Score=33.62 Aligned_cols=31 Identities=10% Similarity=-0.003 Sum_probs=24.1
Q ss_pred hccccceeecccCChhhHHHHHHh----CCceeeccc
Q 037721 347 LRHESVGCYVCHSGFSSVTEAVIS----DCQLVLLPL 379 (465)
Q Consensus 347 L~~~~~~~~ItHgG~~s~~Eal~~----GvP~l~~P~ 379 (465)
...+++ +|+-||-||+++++.. ++|++.++.
T Consensus 73 ~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 73 ADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ---CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred ccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 345566 9999999999999854 899999873
No 117
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=49.76 E-value=1.1e+02 Score=25.29 Aligned_cols=141 Identities=13% Similarity=0.109 Sum_probs=75.8
Q ss_pred CeEEEEEeCCcccCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhhhhhcCCCceEEecccchHhhhcc
Q 037721 270 KSVIYCSFGSETFLTVDQIKELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRH 349 (465)
Q Consensus 270 ~~~v~vs~GS~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~ 349 (465)
++.|-|-+||.+ +.+..++....|+..|+++=+.+-. ....|+.+.+ |+-..+ -..
T Consensus 7 ~~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~S----------aHR~p~~~~~-----------~~~~a~-~~g 62 (174)
T 3lp6_A 7 RPRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVS----------AHRTPEAMFS-----------YARGAA-ARG 62 (174)
T ss_dssp CCSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECC----------TTTCHHHHHH-----------HHHHHH-HHT
T ss_pred CCeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEC----------CCCCHHHHHH-----------HHHHHH-hCC
Confidence 345777788765 5667777888888888876544433 2344443321 111100 012
Q ss_pred ccceeecccCChhhHHHH---HHhCCceeeccccccc--hhhH-HHHhhh-hcceEE-eeecCCCCccCHHHHHHHHHHh
Q 037721 350 ESVGCYVCHSGFSSVTEA---VISDCQLVLLPLKGDQ--FLNS-KLVAGD-LKAGVE-VNRRDHDGHFGKEDIFKAVKTV 421 (465)
Q Consensus 350 ~~~~~~ItHgG~~s~~Ea---l~~GvP~l~~P~~~DQ--~~na-~~v~~~-~G~G~~-l~~~~~~~~~~~~~l~~ai~~l 421 (465)
.++ +|.-.|...-+-. -..-+|+|.+|...-. -..+ .-+.+. -|+.+. +... +..++.-+...|-.+
T Consensus 63 ~~V--iIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~daLlS~vqmp~GvpVatV~I~---~~~nAa~lAa~Il~~ 137 (174)
T 3lp6_A 63 LEV--IIAGAGGAAHLPGMVAAATPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIG---GAGNAGLLAVRMLGA 137 (174)
T ss_dssp CCE--EEEEEESSCCHHHHHHHHCSSCEEEEEECCSSGGGHHHHHHHHCCCTTCCCEECCTT---CHHHHHHHHHHHHHT
T ss_pred CCE--EEEecCchhhhHHHHHhccCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCeeEEEEcC---cchHHHHHHHHHHhC
Confidence 234 7877775322222 2356899999975221 1111 122222 033222 2211 135666666666543
Q ss_pred hcccCCcchHHHHHHHHHHHHHHHc
Q 037721 422 MVDVNKEPGASIRANQKWWREFLLN 446 (465)
Q Consensus 422 l~~~~~~~~~~~~~~a~~l~~~~~~ 446 (465)
. |++++++.+..++.+++
T Consensus 138 -~------d~~l~~kl~~~r~~~~~ 155 (174)
T 3lp6_A 138 -A------NPQLRARIVAFQDRLAD 155 (174)
T ss_dssp -T------CHHHHHHHHHHHHHHHH
T ss_pred -C------CHHHHHHHHHHHHHHHH
Confidence 3 68899999988888864
No 118
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=49.64 E-value=15 Score=31.56 Aligned_cols=48 Identities=15% Similarity=0.100 Sum_probs=36.4
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHh-CCCEEEEEeCCCChhhhhcc
Q 037721 8 ADQLHVVMFPWFAFGHISPFVQLSNKLSL-HGVKVSFFSAPGNIPRIKSS 56 (465)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~-rGh~V~~~~~~~~~~~i~~~ 56 (465)
.++.||++.-.|+.+=. -...+.+.|.+ +|++|.++.++....++...
T Consensus 17 l~~k~IllgvTGsiaa~-k~~~lv~~L~~~~g~~V~vv~T~~A~~fi~~~ 65 (206)
T 1qzu_A 17 ERKFHVLVGVTGSVAAL-KLPLLVSKLLDIPGLEVAVVTTERAKHFYSPQ 65 (206)
T ss_dssp CSSEEEEEEECSSGGGG-THHHHHHHHC---CEEEEEEECTGGGGSSCGG
T ss_pred cCCCEEEEEEeChHHHH-HHHHHHHHHhcccCCEEEEEECHhHHHHhCHH
Confidence 34578888888877744 46899999999 89999999999877776543
No 119
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=49.42 E-value=62 Score=29.35 Aligned_cols=104 Identities=12% Similarity=0.137 Sum_probs=67.7
Q ss_pred HHHHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhhhhhcCCCceEEecccchHhhhccccceeecccCChhhHHHH
Q 037721 288 IKELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRHESVGCYVCHSGFSSVTEA 367 (465)
Q Consensus 288 ~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~~~~~~~ItHgG~~s~~Ea 367 (465)
-.++++.++..+..+++..+. ...+|+.|.+..+.+-+-+ |+++ .=...|.+.+..|
T Consensus 155 ~~~~~~~l~~~~~Dlivlagy----------~~il~~~~l~~~~~~~iNi-----------HpSl--LP~~rG~~p~~~A 211 (288)
T 3obi_A 155 EAAITALIAQTHTDLVVLARY----------MQILSDEMSARLAGRCINI-----------HHSF--LPGFKGAKPYHQA 211 (288)
T ss_dssp HHHHHHHHHHHTCCEEEESSC----------CSCCCHHHHHHTTTSEEEE-----------EEEC--SSCCCSSCHHHHH
T ss_pred HHHHHHHHHhcCCCEEEhhhh----------hhhCCHHHHhhhcCCeEEe-----------Cccc--ccCCCCchHHHHH
Confidence 345788888888999888765 4578887776654433333 4443 3345699999999
Q ss_pred HHhCCceeeccccc--cchhhHHHHhhhhcceEEeeecCCCCccCHHHHHHHHHHhh
Q 037721 368 VISDCQLVLLPLKG--DQFLNSKLVAGDLKAGVEVNRRDHDGHFGKEDIFKAVKTVM 422 (465)
Q Consensus 368 l~~GvP~l~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~ll 422 (465)
+.+|+...++=.+. +..+.+..+.+. -+.+... -|.++|.+.+.++-
T Consensus 212 ~~~G~~~~G~Tvh~v~~~~D~GpIi~Q~---~v~i~~~-----dt~~~L~~r~~~~e 260 (288)
T 3obi_A 212 FDRGVKLIGATAHYVTSALDEGPIIDQD---VERISHR-----DTPADLVRKGRDIE 260 (288)
T ss_dssp HHHTCSEEEEEEEECCSSTTCSCEEEEE---EEECCTT-----CCHHHHHHHHHHHH
T ss_pred HHcCCCEEEEEEEEECCCCcCCCeEEEE---EEecCCC-----CCHHHHHHHHHHHH
Confidence 99999998877532 444444434333 2233333 58889888887654
No 120
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=49.37 E-value=84 Score=28.68 Aligned_cols=106 Identities=14% Similarity=0.187 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhhhhhcCCCceEEecccchHhhhccccceeecccCChhhHH
Q 037721 286 DQIKELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRHESVGCYVCHSGFSSVT 365 (465)
Q Consensus 286 ~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~~~~~~~ItHgG~~s~~ 365 (465)
+.-.++++.++..+..+++..+. ...+|+.|.+..+.+-+-+ |+++ .=...|.+.+.
T Consensus 168 ~~~~~~~~~l~~~~~DliVlagy----------m~IL~~~~l~~~~~~~INi-----------HpSl--LP~frG~~p~~ 224 (302)
T 3o1l_A 168 PAFAEVSRLVGHHQADVVVLARY----------MQILPPQLCREYAHQVINI-----------HHSF--LPSFVGAKPYH 224 (302)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSC----------CSCCCTTHHHHTTTCEEEE-----------ESSC--TTSSCSSCHHH
T ss_pred HHHHHHHHHHHHhCCCEEEHhHh----------hhhcCHHHHhhhhCCeEEe-----------Cccc--ccCCCCccHHH
Confidence 44456788888888999888775 4567777776554433333 4443 33456999999
Q ss_pred HHHHhCCceeeccccc--cchhhHHHHhhhhcceEEeeecCCCCccCHHHHHHHHHHhh
Q 037721 366 EAVISDCQLVLLPLKG--DQFLNSKLVAGDLKAGVEVNRRDHDGHFGKEDIFKAVKTVM 422 (465)
Q Consensus 366 Eal~~GvP~l~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~ll 422 (465)
.|+.+|+...++=.+. +..+.+..+.+. -+.+... -|.++|.+.+.++-
T Consensus 225 ~Ai~~G~k~tG~TvH~v~~~lD~GpII~Q~---~v~I~~~-----dt~~~L~~r~~~~e 275 (302)
T 3o1l_A 225 QASLRGVKLIGATCHYVTEELDAGPIIEQD---VVRVSHR-----DSIENMVRFGRDVE 275 (302)
T ss_dssp HHHHHTCSEEEEEEEECCSSTTCSCEEEEE---EEECCTT-----CCHHHHHHHHHHHH
T ss_pred HHHHcCCCeEEEEEEEECCCCcCCCeEEEE---EEecCCC-----CCHHHHHHHHHHHH
Confidence 9999999998877532 344444434333 2233333 58889888877543
No 121
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=49.35 E-value=59 Score=29.49 Aligned_cols=104 Identities=13% Similarity=0.139 Sum_probs=67.3
Q ss_pred HHHHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhhhhhcCCCceEEecccchHhhhccccceeecccCChhhHHHH
Q 037721 288 IKELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRHESVGCYVCHSGFSSVTEA 367 (465)
Q Consensus 288 ~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~~~~~~~ItHgG~~s~~Ea 367 (465)
-.++++.++..+..+++..+. ...+|+.|.+..+.+-+-+ |+++ .=...|.+.+..|
T Consensus 154 ~~~~~~~l~~~~~Dlivlagy----------m~il~~~~l~~~~~~~iNi-----------HpSl--LP~~rG~~p~~~A 210 (287)
T 3nrb_A 154 ESQIKNIVTQSQADLIVLARY----------MQILSDDLSAFLSGRCINI-----------HHSF--LPGFKGAKPYHQA 210 (287)
T ss_dssp HHHHHHHHHHHTCSEEEESSC----------CSCCCHHHHHHHTTSEEEE-----------ESSC--TTTTCSSCHHHHH
T ss_pred HHHHHHHHHHhCCCEEEhhhh----------hhhcCHHHHhhccCCeEEE-----------Cccc--ccCCCCchHHHHH
Confidence 345778888888999888765 4578887776654443333 4443 3345699999999
Q ss_pred HHhCCceeeccccc--cchhhHHHHhhhhcceEEeeecCCCCccCHHHHHHHHHHhh
Q 037721 368 VISDCQLVLLPLKG--DQFLNSKLVAGDLKAGVEVNRRDHDGHFGKEDIFKAVKTVM 422 (465)
Q Consensus 368 l~~GvP~l~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~ll 422 (465)
+.+|+...++=.+. +..+.+..+.+. -+.+... -|.++|.+.+.++-
T Consensus 211 i~~G~k~tG~Tvh~v~~~lD~GpIi~Q~---~v~i~~~-----dt~~~L~~r~~~~e 259 (287)
T 3nrb_A 211 HTRGVKLIGATAHFVTADLDEGPIIAQD---VEHVSHR-----DSAEDLVRKGRDIE 259 (287)
T ss_dssp HHHTCSEEEEEEEECCSSSSCCCEEEEE---EEECCTT-----CCHHHHHHHHHHHH
T ss_pred HHcCCCeEEEEEEEECCCCcCCCEEEEE---EEecCCC-----CCHHHHHHHHHHHH
Confidence 99999998877542 333333333332 2223333 58888888887654
No 122
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=49.23 E-value=14 Score=29.64 Aligned_cols=33 Identities=15% Similarity=0.222 Sum_probs=25.8
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 037721 10 QLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAP 47 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~ 47 (465)
+.||+++-+ |++- ..+++.|.++||+|+++...
T Consensus 3 ~~~vlI~G~---G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGH---SILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECC---SHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECC---CHHH--HHHHHHHHHCCCCEEEEECC
Confidence 457888743 5554 67899999999999999875
No 123
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=49.01 E-value=91 Score=25.75 Aligned_cols=143 Identities=10% Similarity=0.097 Sum_probs=73.9
Q ss_pred CeEEEEEeCCcccCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhhhhhcCCCceEEecccchHhhhcc
Q 037721 270 KSVIYCSFGSETFLTVDQIKELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRH 349 (465)
Q Consensus 270 ~~~v~vs~GS~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~ 349 (465)
++.|-|-+||.+ +.+..++....|+..|+++=+.+-. ....|+.+.+ |+.. ...
T Consensus 12 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~ev~V~S----------aHR~p~~~~~-----------~~~~---a~~ 65 (174)
T 3kuu_A 12 GVKIAIVMGSKS--DWATMQFAADVLTTLNVPFHVEVVS----------AHRTPDRLFS-----------FAEQ---AEA 65 (174)
T ss_dssp CCCEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC----------TTTCHHHHHH-----------HHHH---TTT
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEc----------ccCCHHHHHH-----------HHHH---HHh
Confidence 345777788765 5667777888888888886554443 2344443321 1100 001
Q ss_pred ccceeecccCChhhHHHHH---HhCCceeecccccc-chhh--HHHHhhh-hcceEE-eeecCCCCccCHHHHHHHHHHh
Q 037721 350 ESVGCYVCHSGFSSVTEAV---ISDCQLVLLPLKGD-QFLN--SKLVAGD-LKAGVE-VNRRDHDGHFGKEDIFKAVKTV 421 (465)
Q Consensus 350 ~~~~~~ItHgG~~s~~Eal---~~GvP~l~~P~~~D-Q~~n--a~~v~~~-~G~G~~-l~~~~~~~~~~~~~l~~ai~~l 421 (465)
..++.+|.-.|...-+-.+ ..-+|+|.+|...- -... -.-+.+. -|+.+. +...+ .+..++.-+...|-.+
T Consensus 66 ~g~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmP~GvPVatV~I~~-a~~~nAa~lAa~ILa~ 144 (174)
T 3kuu_A 66 NGLHVIIAGNGGAAHLPGMLAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGK-AGAANAALLAAQILAL 144 (174)
T ss_dssp TTCSEEEEEEESSCCHHHHHHHTCSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSSH-HHHHHHHHHHHHHHHT
T ss_pred CCCcEEEEECChhhhhHHHHHhccCCCEEEeeCCCCCCCCHHHHHHhhhCCCCCeeEEEEeCC-ccchHHHHHHHHHHcC
Confidence 1223377776653322222 33589999997532 1111 1222221 043221 11110 0124455555555443
Q ss_pred hcccCCcchHHHHHHHHHHHHHHHc
Q 037721 422 MVDVNKEPGASIRANQKWWREFLLN 446 (465)
Q Consensus 422 l~~~~~~~~~~~~~~a~~l~~~~~~ 446 (465)
. |++++++.++.++.+++
T Consensus 145 -~------d~~l~~kl~~~r~~~~~ 162 (174)
T 3kuu_A 145 -H------DTELAGRLAHWRQSQTD 162 (174)
T ss_dssp -T------CHHHHHHHHHHHHHHHH
T ss_pred -C------CHHHHHHHHHHHHHHHH
Confidence 4 68899999888888763
No 124
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=47.97 E-value=33 Score=32.59 Aligned_cols=89 Identities=9% Similarity=0.020 Sum_probs=53.2
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCC-ChhhhhcccCCCCCeeEEEccCCCCCCCCCCCCCCCCC
Q 037721 8 ADQLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPG-NIPRIKSSLNLTPMADIIPLQIPHVDGLPPGLDSTSEM 86 (465)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~-~~~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 86 (465)
++..+|+++..+.. .+.+++++++.|++|.++..+. ........ -++..++ + .
T Consensus 5 ~~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~~~~~~~~~~a------d~~~~~~------~-~-------- 58 (403)
T 4dim_A 5 YDNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMPNAHKPCLNLA------DEISYMD------I-S-------- 58 (403)
T ss_dssp -CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECSSCCHHHHHHC------SEEEECC------T-T--------
T ss_pred cCCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCCCCCCcchhhC------CeEEEec------C-C--------
Confidence 45678988877754 3668999999999999997643 32322211 1223332 0 0
Q ss_pred chHHHHHHHHHHHhhHHHHHHHHhhcCCcEEEEcCCCcc---cccccccccCCe
Q 037721 87 TPHMAELLKQALDLMQPQIKTLLSQLKPHFVFFDFTHYW---LPGLVGSQLGIK 137 (465)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~vi~D~~~~~---~~~~~A~~~giP 137 (465)
-.+.+.+++++.++|+|+....... ...+ ++.+|+|
T Consensus 59 --------------d~~~l~~~~~~~~~d~v~~~~~~~~~~~~a~~-~~~~gl~ 97 (403)
T 4dim_A 59 --------------NPDEVEQKVKDLNLDGAATCCLDTGIVSLARI-CDKENLV 97 (403)
T ss_dssp --------------CHHHHHHHTTTSCCSEEECCSCSTTHHHHHHH-HHHHTCS
T ss_pred --------------CHHHHHHHHHHcCCCEEEeCCcchhHHHHHHH-HHHcCcC
Confidence 0134566777789999996321222 2345 6788885
No 125
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=47.69 E-value=42 Score=29.00 Aligned_cols=99 Identities=13% Similarity=0.051 Sum_probs=56.1
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhC--CCEEEEEeCC-CC---hhhhhcccCCCCCeeEEEccCCCCCCCCCCCCC
Q 037721 9 DQLHVVMFPWFAFGHISPFVQLSNKLSLH--GVKVSFFSAP-GN---IPRIKSSLNLTPMADIIPLQIPHVDGLPPGLDS 82 (465)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~V~~~~~~-~~---~~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~~~ 82 (465)
+++||+++..++.+- +.+|.+++.+. +++|..+.+. .. .+..++.| +.+..++ . ..
T Consensus 7 ~~~ri~vl~SG~gsn---l~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~g-----Ip~~~~~----~---~~--- 68 (215)
T 3kcq_A 7 KELRVGVLISGRGSN---LEALAKAFSTEESSVVISCVISNNAEARGLLIAQSYG-----IPTFVVK----R---KP--- 68 (215)
T ss_dssp CCEEEEEEESSCCHH---HHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHTT-----CCEEECC----B---TT---
T ss_pred CCCEEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHcC-----CCEEEeC----c---cc---
Confidence 466888877775433 44455555544 3677766653 22 22455566 7666654 0 11
Q ss_pred CCCCchHHHHHHHHHHHhhHHHHHHHHhhcCCcEEEEcCC-CcccccccccccCCeeEEEec
Q 037721 83 TSEMTPHMAELLKQALDLMQPQIKTLLSQLKPHFVFFDFT-HYWLPGLVGSQLGIKTVNFSV 143 (465)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~vi~D~~-~~~~~~~~A~~~giP~v~~~~ 143 (465)
.. .+.+.+.+++.+||++|.-.+ -.-...+ -+.....++.+++
T Consensus 69 ---~~--------------~~~~~~~L~~~~~Dlivlagy~~IL~~~~-l~~~~~~~iNiHp 112 (215)
T 3kcq_A 69 ---LD--------------IEHISTVLREHDVDLVCLAGFMSILPEKF-VTDWHHKIINIHP 112 (215)
T ss_dssp ---BC--------------HHHHHHHHHHTTCSEEEESSCCSCCCHHH-HHHTTTSEEEEES
T ss_pred ---CC--------------hHHHHHHHHHhCCCEEEEeCCceEeCHHH-HhhccCCeEEECc
Confidence 00 046677888899999887653 2222334 4455556777655
No 126
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=47.42 E-value=1.3e+02 Score=25.60 Aligned_cols=102 Identities=15% Similarity=0.204 Sum_probs=64.7
Q ss_pred HHHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhhhhhcCCCceEEecccchHhhhccccceeecccCChhhHHHHH
Q 037721 289 KELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRHESVGCYVCHSGFSSVTEAV 368 (465)
Q Consensus 289 ~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~~~~~~~ItHgG~~s~~Eal 368 (465)
..+.+.++..+..+++..+. ...+|+.+.+..+..-+-+ |+++ .=-..|...+..|+
T Consensus 69 ~~~~~~l~~~~~Dliv~a~y----------~~il~~~~l~~~~~~~iNi-----------HpSL--LP~yrG~~pi~~Ai 125 (209)
T 1meo_A 69 SAIDLVLEEFSIDIVCLAGF----------MRILSGPFVQKWNGKMLNI-----------HPSL--LPSFKGSNAHEQAL 125 (209)
T ss_dssp HHHHHHHHHTTCCEEEEESC----------CSCCCHHHHHHTTTSEEEE-----------ESSS--TTSSCSSCHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEcch----------hhhCCHHHHhhhcCCEEEE-----------ccCc--CcCCCCccHHHHHH
Confidence 34778888888999988875 3467777776544333333 4444 44457899999999
Q ss_pred HhCCceeecccc--ccchhhHHHHhhhhcceEEeeecCCCCccCHHHHHHHHHHh
Q 037721 369 ISDCQLVLLPLK--GDQFLNSKLVAGDLKAGVEVNRRDHDGHFGKEDIFKAVKTV 421 (465)
Q Consensus 369 ~~GvP~l~~P~~--~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~l 421 (465)
.+|....++=++ .+..+.+..+.+. -+.+... -|.++|.+.+.++
T Consensus 126 ~~G~~~tGvTvh~v~~~~D~G~Ii~Q~---~v~I~~~-----dt~~~L~~rl~~~ 172 (209)
T 1meo_A 126 ETGVTVTGCTVHFVAEDVDAGQIILQE---AVPVKRG-----DTVATLSERVKLA 172 (209)
T ss_dssp HHTCSEEEEEEEECCC---CCCEEEEE---EEECCTT-----CCHHHHHHHHHHH
T ss_pred HcCCCcEEEEEEEECCCCcCCCEEEEE---EEecCCC-----CCHHHHHHHHHHH
Confidence 999998777643 3444444444433 2223332 5888888877654
No 127
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=47.14 E-value=1.2e+02 Score=27.71 Aligned_cols=94 Identities=13% Similarity=0.075 Sum_probs=0.0
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCC-----------ChhhhhcccCCCCCeeEEEccCCCCCCCCCC
Q 037721 11 LHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPG-----------NIPRIKSSLNLTPMADIIPLQIPHVDGLPPG 79 (465)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~-----------~~~~i~~~g~~~~~~~~~~l~~~~~~~~~~~ 79 (465)
+||+|+..| ......-++|.++||+|..+.+.. ..+...+.| +.+.... ....
T Consensus 1 mrivf~gt~-----~fa~~~L~~L~~~~~~i~~Vvt~~d~~~g~~~~~~v~~~A~~~g-----Ipv~~~~-----~~~~- 64 (305)
T 2bln_A 1 MKTVVFAYH-----DMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERG-----IPVYAPD-----NVNH- 64 (305)
T ss_dssp CEEEEEECH-----HHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHHT-----CCEECCS-----CCCS-
T ss_pred CEEEEEEcC-----HHHHHHHHHHHHCCCcEEEEEcCCCCCCCCcCccHHHHHHHHcC-----CCEECCC-----cCCc-
Q ss_pred CCCCCCCchHHHHHHHHHHHhhHHHHHHHHhhcCCcE-EEEcCCCcccccccccccCCeeEEEecc
Q 037721 80 LDSTSEMTPHMAELLKQALDLMQPQIKTLLSQLKPHF-VFFDFTHYWLPGLVGSQLGIKTVNFSVF 144 (465)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~-vi~D~~~~~~~~~~A~~~giP~v~~~~~ 144 (465)
+.+.+.+++.+||+ |++.+.-.-...+ -+.....++.++++
T Consensus 65 -----------------------~~~~~~l~~~~~Dliv~~~y~~ilp~~i-l~~~~~g~iNiHpS 106 (305)
T 2bln_A 65 -----------------------PLWVERIAQLSPDVIFSFYYRHLIYDEI-LQLAPAGAFNLHGS 106 (305)
T ss_dssp -----------------------HHHHHHHHHTCCSEEEEESCCSCCCHHH-HTTCTTCEEEEESS
T ss_pred -----------------------HHHHHHHHhcCCCEEEEeccccccCHHH-HhcCcCCEEEecCC
No 128
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=46.57 E-value=82 Score=27.13 Aligned_cols=102 Identities=13% Similarity=0.179 Sum_probs=65.8
Q ss_pred HHHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhhhhhcCCCceEEecccchHhhhccccceeecccCChhhHHHHH
Q 037721 289 KELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRHESVGCYVCHSGFSSVTEAV 368 (465)
Q Consensus 289 ~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~~~~~~~ItHgG~~s~~Eal 368 (465)
.++++.++..+..+++..+. ...+|+.+.+..+..-+-+ |+++ .=...|...+..|+
T Consensus 73 ~~~~~~l~~~~~Dliv~agy----------~~il~~~~l~~~~~~~iNi-----------HpSL--LP~yrG~~pi~~Ai 129 (215)
T 3tqr_A 73 STLQKTIDHYDPKLIVLAGF----------MRKLGKAFVSHYSGRMINI-----------HPSL--LPKYTGLNTHERAL 129 (215)
T ss_dssp HHHHHHHHTTCCSEEEESSC----------CSCCCHHHHHHTTTSEEEE-----------ESSS--TTTTCSSCHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEccc----------hhhCCHHHHhhccCCeEEe-----------Cccc--CCCCCChhHHHHHH
Confidence 45788888889999988775 3567777776544333333 4444 33456899999999
Q ss_pred HhCCceeecccc--ccchhhHHHHhhhhcceEEeeecCCCCccCHHHHHHHHHHh
Q 037721 369 ISDCQLVLLPLK--GDQFLNSKLVAGDLKAGVEVNRRDHDGHFGKEDIFKAVKTV 421 (465)
Q Consensus 369 ~~GvP~l~~P~~--~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~l 421 (465)
.+|+...++=.+ .+..+.+..+.+. -+.+... -|.++|.+.+.++
T Consensus 130 ~~G~~~tGvTvh~v~~~~D~G~Ii~Q~---~v~I~~~-----dt~~~L~~rl~~~ 176 (215)
T 3tqr_A 130 AAGETEHGVSVHYVTEDLDAGPLICQA---RLSITPQ-----DTPETLKTRVHAL 176 (215)
T ss_dssp HTTCSEEEEEEEECC-CTTCSCEEEEE---EEECCTT-----CCHHHHHHHHHHH
T ss_pred HcCCCeEEEEEEEEcCCCCCCCEEEEE---EEecCCC-----CCHHHHHHHHHHH
Confidence 999998777653 2444444444433 2223333 5888888887654
No 129
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=46.57 E-value=55 Score=30.48 Aligned_cols=100 Identities=12% Similarity=0.157 Sum_probs=57.4
Q ss_pred CcEEEEecCCCccC----HHHHHHHHHHHHhCCCEEEEEeCCCChhhhhccc-CCCCCeeEEEccCCCCCCCCCCCCCCC
Q 037721 10 QLHVVMFPWFAFGH----ISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSSL-NLTPMADIIPLQIPHVDGLPPGLDSTS 84 (465)
Q Consensus 10 ~~~il~~~~~~~GH----~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~~g-~~~~~~~~~~l~~~~~~~~~~~~~~~~ 84 (465)
+.-|++.|..+... ..-+..+++.|.++|++|.+++.+...+.+++.. ... -....+. + .
T Consensus 185 ~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~~~~--~~~~~l~---------g---~- 249 (349)
T 3tov_A 185 DILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQME--TKPIVAT---------G---K- 249 (349)
T ss_dssp CCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHHTCS--SCCEECT---------T---C-
T ss_pred CCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHHhcc--cccEEee---------C---C-
Confidence 34566666654431 3468899999998899999877766555544321 000 0111110 0 0
Q ss_pred CCchHHHHHHHHHHHhhHHHHHHHHhhcCCcEEEEcCCCcccccccccccCCeeEEEecc
Q 037721 85 EMTPHMAELLKQALDLMQPQIKTLLSQLKPHFVFFDFTHYWLPGLVGSQLGIKTVNFSVF 144 (465)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~vi~D~~~~~~~~~~A~~~giP~v~~~~~ 144 (465)
. ....+..+++ ..|++|+.- .....+ |..+|+|+|.++..
T Consensus 250 -~--------------sl~e~~ali~--~a~~~i~~D--sG~~Hl-Aaa~g~P~v~lfg~ 289 (349)
T 3tov_A 250 -F--------------QLGPLAAAMN--RCNLLITND--SGPMHV-GISQGVPIVALYGP 289 (349)
T ss_dssp -C--------------CHHHHHHHHH--TCSEEEEES--SHHHHH-HHTTTCCEEEECSS
T ss_pred -C--------------CHHHHHHHHH--hCCEEEECC--CCHHHH-HHhcCCCEEEEECC
Confidence 0 0123344444 459988754 245566 77899999988653
No 130
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=46.23 E-value=86 Score=27.00 Aligned_cols=102 Identities=14% Similarity=0.191 Sum_probs=66.1
Q ss_pred HHHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhhhhhcCCCceEEecccchHhhhccccceeecccCChhhHHHHH
Q 037721 289 KELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRHESVGCYVCHSGFSSVTEAV 368 (465)
Q Consensus 289 ~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~~~~~~~ItHgG~~s~~Eal 368 (465)
..+++.++..+..+++..+. ...+|+.+.+..+..-+-+ |+++ .=...|...+..|+
T Consensus 72 ~~~~~~L~~~~~Dlivlagy----------~~IL~~~~l~~~~~~~iNi-----------HpSL--LP~yrG~~pi~~Ai 128 (215)
T 3kcq_A 72 EHISTVLREHDVDLVCLAGF----------MSILPEKFVTDWHHKIINI-----------HPSL--LPSFKGLNAQEQAY 128 (215)
T ss_dssp HHHHHHHHHTTCSEEEESSC----------CSCCCHHHHHHTTTSEEEE-----------ESSC--TTTTCSSCHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEeCC----------ceEeCHHHHhhccCCeEEE-----------Cccc--ccCCCCccHHHHHH
Confidence 45677777788888888765 4567887776544433333 4444 44456899999999
Q ss_pred HhCCceeecccc--ccchhhHHHHhhhhcceEEeeecCCCCccCHHHHHHHHHHh
Q 037721 369 ISDCQLVLLPLK--GDQFLNSKLVAGDLKAGVEVNRRDHDGHFGKEDIFKAVKTV 421 (465)
Q Consensus 369 ~~GvP~l~~P~~--~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~l 421 (465)
.+|+...++=.+ .+..+.+..+.+. -+.+... -|.++|.+.+.++
T Consensus 129 ~~G~~~tGvTvh~v~~~lD~G~Ii~Q~---~v~I~~~-----dt~~~L~~rl~~~ 175 (215)
T 3kcq_A 129 KAGVKIAGCTLHYVYQELDAGPIIMQA---AVPVLRE-----DTAESLASRILAA 175 (215)
T ss_dssp HHTCSEEEEEEEECCSSTTCSCEEEEE---EEECCTT-----CCHHHHHHHHHHH
T ss_pred HcCCCeEEEEEEEEcCCCCCCCEEEEE---EeecCCC-----CCHHHHHHHHHHH
Confidence 999998777753 2444444444433 2233333 5888888887654
No 131
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=46.12 E-value=40 Score=26.49 Aligned_cols=44 Identities=5% Similarity=-0.028 Sum_probs=32.1
Q ss_pred cEEEE-ecCC--CccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhh
Q 037721 11 LHVVM-FPWF--AFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIK 54 (465)
Q Consensus 11 ~~il~-~~~~--~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~ 54 (465)
.+++| +..+ +.......+.+|...++.||+|+++-.......+.
T Consensus 16 ~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~dGV~~l~ 62 (134)
T 3mc3_A 16 XXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIXGPXLLD 62 (134)
T ss_dssp CEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTTGGGGGB
T ss_pred ceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeCcHHHHh
Confidence 34544 3344 56777899999999999999999988776555443
No 132
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=45.99 E-value=76 Score=28.83 Aligned_cols=103 Identities=15% Similarity=0.211 Sum_probs=67.1
Q ss_pred HHHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhhhhhcCCCceEEecccchHhhhccccceeecccCChhhHHHHH
Q 037721 289 KELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRHESVGCYVCHSGFSSVTEAV 368 (465)
Q Consensus 289 ~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~~~~~~~ItHgG~~s~~Eal 368 (465)
.++++.++..+..+++..+. ...+|+.+.+..+.+-+-+ |+++ .=...|.+.+..|+
T Consensus 161 ~~~~~~l~~~~~Dlivla~y----------~~il~~~~l~~~~~~~iNi-----------HpSl--LP~~rG~~p~~~Ai 217 (292)
T 3lou_A 161 AQWLDVFETSGAELVILARY----------MQVLSPEASARLANRAINI-----------HHSF--LPGFKGAKPYHQAH 217 (292)
T ss_dssp HHHHHHHHHHTCSEEEESSC----------CSCCCHHHHHHTTTSEEEE-----------EEEC--SSCCCSSCHHHHHH
T ss_pred HHHHHHHHHhCCCEEEecCc----------hhhCCHHHHhhhcCCeEEe-----------CCCc--CcCCCCccHHHHHH
Confidence 45778888888898888765 4568887776654443333 4444 34456999999999
Q ss_pred HhCCceeeccccc--cchhhHHHHhhhhcceEEeeecCCCCccCHHHHHHHHHHhh
Q 037721 369 ISDCQLVLLPLKG--DQFLNSKLVAGDLKAGVEVNRRDHDGHFGKEDIFKAVKTVM 422 (465)
Q Consensus 369 ~~GvP~l~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~ll 422 (465)
.+|+...++=.+. +..+.+..+.+. -+.+... -|.++|.+.+.++-
T Consensus 218 ~~G~~~~G~Tvh~v~~~lD~G~Ii~Q~---~v~i~~~-----dt~~~L~~r~~~~e 265 (292)
T 3lou_A 218 ARGVKLIGATAHFVTDDLDEGPIIEQV---VERVDHS-----YRPEQLLAVGRDVE 265 (292)
T ss_dssp HHTCSEEEEEEEECCSSTTCSCEEEEE---EEECCTT-----CCHHHHHHHHHHHH
T ss_pred HcCCCeEEEEEEEEcCCCcCCCEEEEE---EEEcCCC-----CCHHHHHHHHHHHH
Confidence 9999998877532 334444444333 2233333 58888888886544
No 133
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=45.96 E-value=81 Score=28.54 Aligned_cols=104 Identities=14% Similarity=0.199 Sum_probs=66.9
Q ss_pred HHHHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhhhhhcCCCceEEecccchHhhhccccceeecccCChhhHHHH
Q 037721 288 IKELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRHESVGCYVCHSGFSSVTEA 367 (465)
Q Consensus 288 ~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~~~~~~~ItHgG~~s~~Ea 367 (465)
-.++++.++..+..+++..+. ...+|+.+.+..+.+-+-+ |+++ .=...|.+.+..|
T Consensus 155 ~~~~~~~l~~~~~Dlivla~y----------~~il~~~~l~~~~~~~iNi-----------HpSl--LP~~rG~~p~~~A 211 (286)
T 3n0v_A 155 ERKVLQVIEETGAELVILARY----------MQVLSPELCRRLDGWAINI-----------HHSL--LPGFKGAKPYHQA 211 (286)
T ss_dssp HHHHHHHHHHHTCSEEEESSC----------CSCCCHHHHHHTTTSEEEE-----------EECS--STTCCCSCHHHHH
T ss_pred HHHHHHHHHhcCCCEEEeccc----------ccccCHHHHhhhcCCeEEe-----------cccc--ccCCCCccHHHHH
Confidence 345778888888898888765 4568887776654443333 4443 3345699999999
Q ss_pred HHhCCceeeccccc--cchhhHHHHhhhhcceEEeeecCCCCccCHHHHHHHHHHhh
Q 037721 368 VISDCQLVLLPLKG--DQFLNSKLVAGDLKAGVEVNRRDHDGHFGKEDIFKAVKTVM 422 (465)
Q Consensus 368 l~~GvP~l~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~ll 422 (465)
+.+|+...++=.+. +..+.+..+.+. -+.+... -|.++|.+.+.++-
T Consensus 212 i~~G~~~~G~Tvh~v~~~lD~GpIi~Q~---~~~i~~~-----dt~~~L~~r~~~~e 260 (286)
T 3n0v_A 212 YNKGVKMVGATAHYINNDLDEGPIIAQG---VEVVDHS-----HYPEDLIAKGRDIE 260 (286)
T ss_dssp HHHTCSEEEEEEEECCSSTTCSCEEEEE---EEECCTT-----CCHHHHHHHHHHHH
T ss_pred HHcCCCeEEEEEEEEcCCCCCCceeEEE---EEEcCCC-----CCHHHHHHHHHHHH
Confidence 99999998877542 333333333332 2223333 58888888877544
No 134
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=45.94 E-value=48 Score=32.37 Aligned_cols=34 Identities=9% Similarity=0.090 Sum_probs=27.7
Q ss_pred HHHHHHhhcCCcEEEEcCCCcccccccccccCCeeEEE
Q 037721 104 QIKTLLSQLKPHFVFFDFTHYWLPGLVGSQLGIKTVNF 141 (465)
Q Consensus 104 ~l~~~l~~~~pD~vi~D~~~~~~~~~~A~~~giP~v~~ 141 (465)
.+++++++.+||++|.+.. ...+ |+++|||++.+
T Consensus 366 ~le~~i~~~~pDllig~~~---~~~~-a~k~gip~~~~ 399 (458)
T 3pdi_B 366 DLEHAARAGQAQLVIGNSH---ALAS-ARRLGVPLLRA 399 (458)
T ss_dssp HHHHHHHHHTCSEEEECTT---HHHH-HHHTTCCEEEC
T ss_pred HHHHHHHhcCCCEEEEChh---HHHH-HHHcCCCEEEe
Confidence 3667888889999999874 4567 99999999864
No 135
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=45.80 E-value=1e+02 Score=28.06 Aligned_cols=105 Identities=11% Similarity=0.117 Sum_probs=60.8
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhC--CCEEEEEeC--CCChhhhhcccCCCCCeeEEEccCCCCCCCCCCCCCC
Q 037721 8 ADQLHVVMFPWFAFGHISPFVQLSNKLSLH--GVKVSFFSA--PGNIPRIKSSLNLTPMADIIPLQIPHVDGLPPGLDST 83 (465)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~V~~~~~--~~~~~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~ 83 (465)
..++||+++.++. || -+-+|..+..+. +.+|..+.+ +......++.| +.+..++ .. .. .
T Consensus 103 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~~~g-----Ip~~~~~----~~--~~-~-- 165 (302)
T 3o1l_A 103 AQKKRVVLMASRE-SH--CLADLLHRWHSDELDCDIACVISNHQDLRSMVEWHD-----IPYYHVP----VD--PK-D-- 165 (302)
T ss_dssp TSCCEEEEEECSC-CH--HHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHHTTT-----CCEEECC----CC--SS-C--
T ss_pred CCCcEEEEEEeCC-ch--hHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHHHcC-----CCEEEcC----CC--cC-C--
Confidence 3467898887775 54 345555554432 467776654 34455666666 8877775 11 00 0
Q ss_pred CCCchHHHHHHHHHHHhhHHHHHHHHhhcCCcEEEEcCC-CcccccccccccCCeeEEEecc
Q 037721 84 SEMTPHMAELLKQALDLMQPQIKTLLSQLKPHFVFFDFT-HYWLPGLVGSQLGIKTVNFSVF 144 (465)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~vi~D~~-~~~~~~~~A~~~giP~v~~~~~ 144 (465)
. ....+.+.+++++.+||+||.-.+ -.-...+ .+.+.-.++.++++
T Consensus 166 --r------------~~~~~~~~~~l~~~~~DliVlagym~IL~~~~-l~~~~~~~INiHpS 212 (302)
T 3o1l_A 166 --K------------EPAFAEVSRLVGHHQADVVVLARYMQILPPQL-CREYAHQVINIHHS 212 (302)
T ss_dssp --C------------HHHHHHHHHHHHHTTCSEEEESSCCSCCCTTH-HHHTTTCEEEEESS
T ss_pred --H------------HHHHHHHHHHHHHhCCCEEEHhHhhhhcCHHH-HhhhhCCeEEeCcc
Confidence 0 002245678888999999876543 2333344 55555667777653
No 136
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=45.24 E-value=18 Score=37.79 Aligned_cols=111 Identities=9% Similarity=0.000 Sum_probs=75.1
Q ss_pred EecccchHhhhccccceeecccCChhhHHHHHHhCCceeeccccccchhhHHHHhhhhcceEEeeecCC---CCccCHHH
Q 037721 337 HTGWVQQQLILRHESVGCYVCHSGFSSVTEAVISDCQLVLLPLKGDQFLNSKLVAGDLKAGVEVNRRDH---DGHFGKED 413 (465)
Q Consensus 337 ~~~~~pq~~vL~~~~~~~~ItHgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~---~~~~~~~~ 413 (465)
+..+.+-.++|..+++ +||=- .+.+.|.+..++|+|.+....|++..- .. | ...+..+. .-..+.++
T Consensus 603 ~~~~~di~~ll~~aD~--lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~~----~r-g--~y~d~~~~~pg~~~~~~~e 672 (729)
T 3l7i_A 603 VSNYNDVSELFLISDC--LITDY-SSVMFDYGILKRPQFFFAYDIDKYDKG----LR-G--FYMNYMEDLPGPIYTEPYG 672 (729)
T ss_dssp CTTCSCHHHHHHTCSE--EEESS-CTHHHHHGGGCCCEEEECTTTTTTTSS----CC-S--BSSCTTSSSSSCEESSHHH
T ss_pred CCCCcCHHHHHHHhCE--EEeec-hHHHHhHHhhCCCEEEecCCHHHHhhc----cC-C--cccChhHhCCCCeECCHHH
Confidence 4456667789999998 99984 468899999999999998777765431 11 2 22221100 01257899
Q ss_pred HHHHHHHhhcccCCcchHHHHHHHHHHHHHHHc---CCchHHHHHHHHHHHH
Q 037721 414 IFKAVKTVMVDVNKEPGASIRANQKWWREFLLN---GQIQDKFIADFVKDLK 462 (465)
Q Consensus 414 l~~ai~~ll~~~~~~~~~~~~~~a~~l~~~~~~---~~~~~~~~~~~~~~l~ 462 (465)
|.++|.....+ +..++++.+++.+++.. +.++++.++.+++..+
T Consensus 673 L~~~i~~~~~~-----~~~~~~~~~~~~~~~~~~~dg~as~ri~~~i~~~~~ 719 (729)
T 3l7i_A 673 LAKELKNLDKV-----QQQYQEKIDAFYDRFCSVDNGKASQYIGDLIHKDIK 719 (729)
T ss_dssp HHHHHTTHHHH-----HHHTHHHHHHHHHHHSTTCCSCHHHHHHHHHHHHHH
T ss_pred HHHHHhhhhcc-----chhHHHHHHHHHHHhCCccCChHHHHHHHHHHhcCc
Confidence 99999887752 46788888888888752 3445666677766544
No 137
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=44.96 E-value=19 Score=28.93 Aligned_cols=97 Identities=12% Similarity=0.147 Sum_probs=62.6
Q ss_pred EEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhcccCCCCCeeEEEccCCCCCCCCCCCCCCCCCchHHHHH
Q 037721 14 VMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSSLNLTPMADIIPLQIPHVDGLPPGLDSTSEMTPHMAEL 93 (465)
Q Consensus 14 l~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (465)
+|++... .+=.-++.+|+.|.+.|+++ +++......+++.| +.+..+. ....+.+
T Consensus 27 vliSv~d-~dK~~l~~~a~~l~~lGf~i--~AT~GTa~~L~~~G-----i~v~~v~-----k~~egg~------------ 81 (143)
T 2yvq_A 27 ILIGIQQ-SFRPRFLGVAEQLHNEGFKL--FATEATSDWLNANN-----VPATPVA-----WPSQEGQ------------ 81 (143)
T ss_dssp EEEECCG-GGHHHHHHHHHHHHTTTCEE--EEEHHHHHHHHHTT-----CCCEEEC-----CGGGC--------------
T ss_pred EEEEecc-cchHHHHHHHHHHHHCCCEE--EECchHHHHHHHcC-----CeEEEEE-----eccCCCc------------
Confidence 6666653 45677999999999999974 34555667888877 7776664 1111100
Q ss_pred HHHHHHhhHHHHHHHHhhcCCcEEEEcCCC--------cccccccccccCCeeEEE
Q 037721 94 LKQALDLMQPQIKTLLSQLKPHFVFFDFTH--------YWLPGLVGSQLGIKTVNF 141 (465)
Q Consensus 94 ~~~~~~~~~~~l~~~l~~~~pD~vi~D~~~--------~~~~~~~A~~~giP~v~~ 141 (465)
+...+.+.+.|++.+.|+||.-..- +..... |-.++||++..
T Consensus 82 -----~~~~~~i~d~i~~g~i~lVInt~~~~~~~~~d~~~iRR~-Av~~~IP~~T~ 131 (143)
T 2yvq_A 82 -----NPSLSSIRKLIRDGSIDLVINLPNNNTKFVHDNYVIRRT-AVDSGIPLLTN 131 (143)
T ss_dssp --------CBCHHHHHHTTSCCEEEECCCCCGGGHHHHHHHHHH-HHHTTCCEECS
T ss_pred -----ccccccHHHHHHCCCceEEEECCCCCCcCCccHHHHHHH-HHHhCCCeEcC
Confidence 0001356778888899999985522 112355 77889998863
No 138
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=44.78 E-value=30 Score=27.73 Aligned_cols=46 Identities=13% Similarity=0.122 Sum_probs=35.6
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhc
Q 037721 10 QLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKS 55 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~ 55 (465)
+.-.+++..+..-.+.+.+.+|...++.|++|+++.+......+.+
T Consensus 8 ~kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv~~l~k 53 (144)
T 2qs7_A 8 KKLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGLQAITK 53 (144)
T ss_dssp CEEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHTBH
T ss_pred CCEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHHHHHhc
Confidence 3334555556788889999999999999999999998876655544
No 139
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=44.28 E-value=1e+02 Score=26.31 Aligned_cols=101 Identities=7% Similarity=-0.014 Sum_probs=53.9
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCCCh----hhhhcccCCCCCeeEEEccCCCCCCCCCCCCCCCC
Q 037721 12 HVVMFPWFAFGHISPFVQLSNKLSLH--GVKVSFFSAPGNI----PRIKSSLNLTPMADIIPLQIPHVDGLPPGLDSTSE 85 (465)
Q Consensus 12 ~il~~~~~~~GH~~p~l~La~~L~~r--Gh~V~~~~~~~~~----~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 85 (465)
||+++..+..+.+. +|.+.+.+. +++|..+.+.... +.+++.| +.+..++. ..+ ..
T Consensus 2 riaVl~SG~Gs~L~---aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~g-----Ip~~~~~~---~~~----~~--- 63 (209)
T 1meo_A 2 RVAVLISGTGSNLQ---ALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAG-----IPTRVINH---KLY----KN--- 63 (209)
T ss_dssp EEEEEESSSCTTHH---HHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHTT-----CCEEECCG---GGS----SS---
T ss_pred eEEEEEECCchHHH---HHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHHcC-----CCEEEECc---ccc----Cc---
Confidence 67777777554443 344555443 7898777654322 2345555 66655530 011 00
Q ss_pred CchHHHHHHHHHHHhhHHHHHHHHhhcCCcEEEEcCC-CcccccccccccCCeeEEEec
Q 037721 86 MTPHMAELLKQALDLMQPQIKTLLSQLKPHFVFFDFT-HYWLPGLVGSQLGIKTVNFSV 143 (465)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~vi~D~~-~~~~~~~~A~~~giP~v~~~~ 143 (465)
. +...+.+.+.+++.+||+||.-.+ -.-...+ -+.....++.+++
T Consensus 64 ---------r---~~~~~~~~~~l~~~~~Dliv~a~y~~il~~~~-l~~~~~~~iNiHp 109 (209)
T 1meo_A 64 ---------R---VEFDSAIDLVLEEFSIDIVCLAGFMRILSGPF-VQKWNGKMLNIHP 109 (209)
T ss_dssp ---------H---HHHHHHHHHHHHHTTCCEEEEESCCSCCCHHH-HHHTTTSEEEEES
T ss_pred ---------h---hhhhHHHHHHHHhcCCCEEEEcchhhhCCHHH-HhhhcCCEEEEcc
Confidence 0 112245677888899999876543 2222233 4445556777655
No 140
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=43.82 E-value=99 Score=26.46 Aligned_cols=102 Identities=15% Similarity=0.162 Sum_probs=65.8
Q ss_pred HHHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhhhhhcCCCceEEecccchHhhhccccceeecccCChhhHHHHH
Q 037721 289 KELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRHESVGCYVCHSGFSSVTEAV 368 (465)
Q Consensus 289 ~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~~~~~~~ItHgG~~s~~Eal 368 (465)
..+++.++..+..+++..+. ...+|+.+.+..+..-+-+ |+++ .=...|...+..|+
T Consensus 76 ~~~~~~l~~~~~Dliv~agy----------~~il~~~~l~~~~~~~iNi-----------HpSL--LP~yrG~~pi~~Ai 132 (209)
T 4ds3_A 76 DAILAALDVLKPDIICLAGY----------MRLLSGRFIAPYEGRILNI-----------HPSL--LPLFPGLHTHQRAL 132 (209)
T ss_dssp HHHHHHHHHHCCSEEEESSC----------CSCCCHHHHGGGTTCEEEE-----------ESSC--TTSSCSSCHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEecc----------ccCcCHHHHhhccCCeEEE-----------CCcc--ccCCCChhHHHHHH
Confidence 45778888889999988875 3567887776544333333 5554 44567899999999
Q ss_pred HhCCceeecccc--ccchhhHHHHhhhhcceEEeeecCCCCccCHHHHHHHHHHh
Q 037721 369 ISDCQLVLLPLK--GDQFLNSKLVAGDLKAGVEVNRRDHDGHFGKEDIFKAVKTV 421 (465)
Q Consensus 369 ~~GvP~l~~P~~--~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~l 421 (465)
.+|+...++=++ .+..+.+..+.+. -+.+... -|.++|.+.+.++
T Consensus 133 ~~G~~~tGvTvh~v~~~~D~G~Ii~Q~---~v~I~~~-----dt~~~L~~r~~~~ 179 (209)
T 4ds3_A 133 DAGMKLAGCTVHLVTEGMDEGPILAQA---AVPVLDG-----DTAETLAARVLKA 179 (209)
T ss_dssp HTTCSEEEEEEEECCC--CCCCEEEEE---EEECCTT-----CCHHHHHHHHHHH
T ss_pred HcCCCeEEEEEEEEcCCCCCCCeEEEE---EEecCCC-----CCHHHHHHHHHHH
Confidence 999998777653 2444444444433 2223332 5888888877653
No 141
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=42.77 E-value=28 Score=29.86 Aligned_cols=43 Identities=16% Similarity=0.043 Sum_probs=30.3
Q ss_pred ccCCCCCCeEEEEEeCCcccCCHHHHHHHHHHHHhcCCCeEEE
Q 037721 263 WLCKYPPKSVIYCSFGSETFLTVDQIKELAIGLEITGLPFFLV 305 (465)
Q Consensus 263 ~l~~~~~~~~v~vs~GS~~~~~~~~~~~i~~al~~~~~~~i~~ 305 (465)
|+.....+.++||..+|......+.+....+++++.|+.+.++
T Consensus 21 f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~ 63 (206)
T 3l4e_A 21 FESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEEL 63 (206)
T ss_dssp HSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 4433334669999988765444567888999999999876543
No 142
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=42.42 E-value=1.2e+02 Score=26.31 Aligned_cols=102 Identities=14% Similarity=0.161 Sum_probs=67.2
Q ss_pred HHHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhhhhhcCCCceEEecccchHhhhccccceeecccCChhhHHHHH
Q 037721 289 KELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRHESVGCYVCHSGFSSVTEAV 368 (465)
Q Consensus 289 ~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~~~~~~~ItHgG~~s~~Eal 368 (465)
..+++.++..+..+++..+. ...+|+.+.+..+..-+-+ |+++ .=-..|...+..|+
T Consensus 91 ~~~~~~l~~~~~Dliv~agy----------~~IL~~~~l~~~~~~~iNi-----------HpSL--LP~yrG~~pi~~Ai 147 (229)
T 3auf_A 91 AALAERLQAYGVDLVCLAGY----------MRLVRGPMLTAFPNRILNI-----------HPSL--LPAFPGLEAQRQAL 147 (229)
T ss_dssp HHHHHHHHHTTCSEEEESSC----------CSCCCHHHHHHSTTCEEEE-----------ESSC--TTSSCSSCHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEcCh----------hHhCCHHHHhhccCCEEEE-----------ccCc--CcCCCCcCHHHHHH
Confidence 34778888889999988775 3567887776544433333 4444 34456999999999
Q ss_pred HhCCceeecccc--ccchhhHHHHhhhhcceEEeeecCCCCccCHHHHHHHHHHh
Q 037721 369 ISDCQLVLLPLK--GDQFLNSKLVAGDLKAGVEVNRRDHDGHFGKEDIFKAVKTV 421 (465)
Q Consensus 369 ~~GvP~l~~P~~--~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~l 421 (465)
.+|+...++=++ .+..+.+..+.+. -+.+... -|.++|.+.+.++
T Consensus 148 ~~G~~~tGvTvh~v~~~~D~G~Ii~Q~---~v~I~~~-----dt~~~L~~rl~~~ 194 (229)
T 3auf_A 148 EHGVKVAGCTVHFVTAGVDEGPIILQA---AVPVLEG-----DTVEDLRRRILAE 194 (229)
T ss_dssp HHTCSEEEEEEEECCSSTTCSCEEEEE---EEECCTT-----CCHHHHHHHHHHH
T ss_pred HcCCCeEEEEEEEECCCCcCCCEEEEE---EEecCCC-----CCHHHHHHHHHHH
Confidence 999998777653 3555555555443 2223333 5888888877654
No 143
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=41.93 E-value=27 Score=28.02 Aligned_cols=36 Identities=19% Similarity=0.185 Sum_probs=26.2
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 037721 8 ADQLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPG 48 (465)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~ 48 (465)
....+|+++-.+..| ..+++.|.++|++|+++....
T Consensus 17 ~~~~~v~IiG~G~iG-----~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLG-----SLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESCG
T ss_pred cCCCcEEEECCCHHH-----HHHHHHHHhCCCeEEEEECCH
Confidence 345788888544333 557899999999999987543
No 144
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=40.89 E-value=1.5e+02 Score=25.30 Aligned_cols=106 Identities=12% Similarity=0.156 Sum_probs=68.6
Q ss_pred HHHHH-HHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhhhhhcCCCceEEecccchHhhhccccceeecccCChhh
Q 037721 285 VDQIK-ELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRHESVGCYVCHSGFSS 363 (465)
Q Consensus 285 ~~~~~-~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~~~~~~~ItHgG~~s 363 (465)
.+.+. .+++.++..+..+++..+. ...+|+.+.+..+..-+-+ |+++ .=-..|...
T Consensus 67 ~~~~~~~~~~~l~~~~~Dliv~a~y----------~~il~~~~l~~~~~~~iNi-----------HpSL--LP~yrG~~p 123 (212)
T 3av3_A 67 KAAFESEILRELKGRQIDWIALAGY----------MRLIGPTLLSAYEGKIVNI-----------HPSL--LPAFPGKDA 123 (212)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEESSC----------CSCCCHHHHHHTTTCEEEE-----------ESSC--TTSSCSTTH
T ss_pred hhhhHHHHHHHHHhcCCCEEEEchh----------hhhCCHHHHhhhcCCEEEE-----------ecCc--CCCCCCcCH
Confidence 33343 4778888888999888765 3467887776554433333 4554 445679999
Q ss_pred HHHHHHhCCceeecccc--ccchhhHHHHhhhhcceEEeeecCCCCccCHHHHHHHHHHh
Q 037721 364 VTEAVISDCQLVLLPLK--GDQFLNSKLVAGDLKAGVEVNRRDHDGHFGKEDIFKAVKTV 421 (465)
Q Consensus 364 ~~Eal~~GvP~l~~P~~--~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~l 421 (465)
+..|+.+|....++=.+ .+..+.+..+.+. -+.+... -|.++|.+.+.++
T Consensus 124 i~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q~---~v~I~~~-----dt~~~L~~r~~~~ 175 (212)
T 3av3_A 124 IGQAYRAGVSETGVTVHYVDEGMDTGPVIAQR---VVPIVPG-----EPIEALEERIHQV 175 (212)
T ss_dssp HHHHHHHTCSEEEEEEEECCSSSSCSCEEEEE---EEECCTT-----CCHHHHHHHHHHH
T ss_pred HHHHHHcCCCeEEEEEEEECCCCCCCCEEEEE---EEecCCC-----CCHHHHHHHHHHH
Confidence 99999999998877753 2444444444433 1223332 5888888887653
No 145
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=40.41 E-value=58 Score=28.48 Aligned_cols=26 Identities=19% Similarity=0.223 Sum_probs=21.4
Q ss_pred ccCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 037721 21 FGHISPFVQLSNKLSLHGVKVSFFSAPG 48 (465)
Q Consensus 21 ~GH~~p~l~La~~L~~rGh~V~~~~~~~ 48 (465)
.|. --..||++|+++|++|++++.+.
T Consensus 28 SG~--mG~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 28 TGH--LGKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp CCH--HHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCH--HHHHHHHHHHHCCCEEEEEeCCc
Confidence 554 35678999999999999998774
No 146
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=40.25 E-value=1.6e+02 Score=24.97 Aligned_cols=44 Identities=16% Similarity=0.213 Sum_probs=27.7
Q ss_pred eEEecccc-hHhhh-ccccceeecccCChhhHHHHHH---------hCCceeeccc
Q 037721 335 VVHTGWVQ-QQLIL-RHESVGCYVCHSGFSSVTEAVI---------SDCQLVLLPL 379 (465)
Q Consensus 335 v~~~~~~p-q~~vL-~~~~~~~~ItHgG~~s~~Eal~---------~GvP~l~~P~ 379 (465)
.+++++.. ...+| .++++ .++--||.||+-|... +++|++.+-.
T Consensus 101 ~i~~~~~~~Rk~~m~~~sda-~IalPGG~GTldEl~e~lt~~qlg~~~kPvvlln~ 155 (199)
T 3qua_A 101 LIVTDTMRERKREMEHRSDA-FIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLDP 155 (199)
T ss_dssp EEEESSHHHHHHHHHHHCSE-EEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECT
T ss_pred eEEcCCHHHHHHHHHHhcCc-cEEeCCCccHHHHHHHHHHHHHhccCCCCEEEEcC
Confidence 44445544 33333 34444 4677788999888743 5899998753
No 147
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=40.12 E-value=1.2e+02 Score=25.98 Aligned_cols=102 Identities=15% Similarity=0.300 Sum_probs=66.6
Q ss_pred HHHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhhhhhcCCCceEEecccchHhhhccccceeecccCChhhHHHHH
Q 037721 289 KELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRHESVGCYVCHSGFSSVTEAV 368 (465)
Q Consensus 289 ~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~~~~~~~ItHgG~~s~~Eal 368 (465)
.++++.++..+..++++.+. ...+|+.+.+..+..-+-+ |+++ .=-..|...+..|+
T Consensus 71 ~~~~~~l~~~~~Dliv~agy----------~~Il~~~~l~~~~~~~iNi-----------HpSL--LP~yrG~~pi~~Ai 127 (211)
T 3p9x_A 71 IEVVQQLKEKQIDFVVLAGY----------MRLVGPTLLGAYEGRIVNI-----------HPSL--LPAFPGLHAIEQAI 127 (211)
T ss_dssp HHHHHHHHHTTCCEEEESSC----------CSCCCHHHHHHHTTSEEEE-----------ESSC--TTSSCSSCHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEeCc----------hhhcCHHHHhhccCCeEEE-----------CCcc--CCCCCCccHHHHHH
Confidence 45778888889999988775 3567887776554433333 4444 44456899999999
Q ss_pred HhCCceeecccc--ccchhhHHHHhhhhcceEEeeecCCCCccCHHHHHHHHHHh
Q 037721 369 ISDCQLVLLPLK--GDQFLNSKLVAGDLKAGVEVNRRDHDGHFGKEDIFKAVKTV 421 (465)
Q Consensus 369 ~~GvP~l~~P~~--~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~l 421 (465)
.+|....++=.+ .+..+.+..+.+. -+.+... -|.++|.+.+.++
T Consensus 128 ~~G~~~tGvTvh~v~~~~D~G~Ii~Q~---~v~I~~~-----dt~~~L~~rl~~~ 174 (211)
T 3p9x_A 128 RANVKVTGVTIHYVDEGMDTGPIIAQE---AVSIEEE-----DTLETLTTKIQAV 174 (211)
T ss_dssp HTTCSEEEEEEEECCSSSSCSCEEEEE---EEECCTT-----CCHHHHHHHHHHH
T ss_pred HcCCCeEEEEEEEEcCCCCCCCEEEEE---EEecCCC-----CCHHHHHHHHHHH
Confidence 999998777653 3444544444433 1223332 5888888877653
No 148
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=40.05 E-value=40 Score=33.08 Aligned_cols=99 Identities=20% Similarity=0.300 Sum_probs=57.9
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhcccCCCCCeeEEEccCCCCCCCCCCCC-CCCCCch
Q 037721 10 QLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSSLNLTPMADIIPLQIPHVDGLPPGLD-STSEMTP 88 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~ 88 (465)
+++-+|++. .+=.-++.+|+.|.+.|+++. ++......++..| +.+..+. ...++|+-.. +...+..
T Consensus 9 ~i~~aLISV---sDK~glvelAk~L~~lGfeI~--ATgGTak~L~e~G-----I~v~~V~--~vTgfPEil~GRVKTLHP 76 (523)
T 3zzm_A 9 PIRRALISV---YDKTGLVDLAQGLSAAGVEII--STGSTAKTIADTG-----IPVTPVE--QLTGFPEVLDGRVKTLHP 76 (523)
T ss_dssp CCCEEEEEE---SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHTTT-----CCCEEHH--HHHSCCCCTTTTSSSCSH
T ss_pred cccEEEEEE---eccccHHHHHHHHHHCCCEEE--EcchHHHHHHHcC-----Cceeecc--ccCCCchhhCCccccCCc
Confidence 455566666 355668999999999998875 6777888899988 7777764 1124444332 2233333
Q ss_pred HHHHHHHHHHHhhHHHHHHHHhhc---CCcEEEEcCC
Q 037721 89 HMAELLKQALDLMQPQIKTLLSQL---KPHFVFFDFT 122 (465)
Q Consensus 89 ~~~~~~~~~~~~~~~~l~~~l~~~---~pD~vi~D~~ 122 (465)
.....+... +-.+.-.+.+++. ..|+||++.+
T Consensus 77 ~ihgGiLa~--r~~~~h~~~l~~~~i~~iDlVvvNLY 111 (523)
T 3zzm_A 77 RVHAGLLAD--LRKSEHAAALEQLGIEAFELVVVNLY 111 (523)
T ss_dssp HHHHHHHCC--TTSHHHHHHHHHHTCCCCSEEEEECC
T ss_pred hhhhhhccC--CCCHHHHHHHHHCCCCceeEEEEeCC
Confidence 332222111 1112222223332 6799999974
No 149
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=39.61 E-value=1.3e+02 Score=25.72 Aligned_cols=102 Identities=19% Similarity=0.223 Sum_probs=66.1
Q ss_pred HHHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhhhhhcCCCceEEecccchHhhhccccceeecccCChhhHHHHH
Q 037721 289 KELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRHESVGCYVCHSGFSSVTEAV 368 (465)
Q Consensus 289 ~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~~~~~~~ItHgG~~s~~Eal 368 (465)
..+++.++..+..+++..+. ...+|+.+.+..+..-+-+ |+++ .=...|...+..|+
T Consensus 69 ~~~~~~l~~~~~Dliv~agy----------~~il~~~~l~~~~~~~iNi-----------HpSl--LP~yrG~~pi~~ai 125 (212)
T 1jkx_A 69 RELIHEIDMYAPDVVVLAGF----------MRILSPAFVSHYAGRLLNI-----------HPSL--LPKYPGLHTHRQAL 125 (212)
T ss_dssp HHHHHHHGGGCCSEEEESSC----------CSCCCHHHHHHTTTSEEEE-----------ESSC--TTSCCSSCHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEeCh----------hhhCCHHHHhhccCCEEEE-----------ccCc--ccCCCCccHHHHHH
Confidence 34778888888898888765 3467877776554433333 4444 34456999999999
Q ss_pred HhCCceeecccc--ccchhhHHHHhhhhcceEEeeecCCCCccCHHHHHHHHHHh
Q 037721 369 ISDCQLVLLPLK--GDQFLNSKLVAGDLKAGVEVNRRDHDGHFGKEDIFKAVKTV 421 (465)
Q Consensus 369 ~~GvP~l~~P~~--~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~l 421 (465)
.+|....++=++ .+..+.+..+.+. -+.+... -|.++|.+.+..+
T Consensus 126 ~~G~~~tGvTvh~v~~~~D~G~Ii~Q~---~v~I~~~-----dt~~~L~~rl~~~ 172 (212)
T 1jkx_A 126 ENGDEEHGTSVHFVTDELDGGPVILQA---KVPVFAG-----DSEDDITARVQTQ 172 (212)
T ss_dssp HTTCSEEEEEEEECCSSTTCSCEEEEE---EEECCTT-----CCHHHHHHHHHHH
T ss_pred HcCCCceEEEEEEEcccccCCCEEEEE---EEEcCCC-----CCHHHHHHHHHHH
Confidence 999998777653 3444444444433 1223332 5888888877654
No 150
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=39.57 E-value=1.5e+02 Score=26.83 Aligned_cols=35 Identities=11% Similarity=-0.007 Sum_probs=25.2
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhC-C-CEEEEEeCCC
Q 037721 8 ADQLHVVMFPWFAFGHISPFVQLSNKLSLH-G-VKVSFFSAPG 48 (465)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r-G-h~V~~~~~~~ 48 (465)
|.+++|+++..+.. .++++.|++. | ++|..+....
T Consensus 2 m~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~~ 38 (331)
T 2pn1_A 2 MQKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCSP 38 (331)
T ss_dssp TTCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESCT
T ss_pred CccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCCC
Confidence 34578999866554 4789999875 7 8888876543
No 151
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=39.29 E-value=29 Score=27.91 Aligned_cols=46 Identities=17% Similarity=0.201 Sum_probs=34.7
Q ss_pred cEEEE-ecCC-CccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhcc
Q 037721 11 LHVVM-FPWF-AFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSS 56 (465)
Q Consensus 11 ~~il~-~~~~-~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~~ 56 (465)
+++++ +-+| ..-.+.-.+=++..|.++||+|++.+++.....++-+
T Consensus 7 m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLleva 54 (157)
T 1kjn_A 7 GKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQVA 54 (157)
T ss_dssp CEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHH
T ss_pred eeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhheecc
Confidence 34544 5556 5555666788899999999999999999877777654
No 152
>2a3d_A Protein (de novo three-helix bundle); NMR {Synthetic construct} SCOP: k.9.1.1
Probab=39.29 E-value=36 Score=21.98 Aligned_cols=29 Identities=17% Similarity=0.030 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHcCCchHHHHHHHHH
Q 037721 431 ASIRANQKWWREFLLNGQIQDKFIADFVK 459 (465)
Q Consensus 431 ~~~~~~a~~l~~~~~~~~~~~~~~~~~~~ 459 (465)
.+|+++...++.+++..|+++..+..|.+
T Consensus 5 aefkqrlaaiktrlqalggseaelaafek 33 (73)
T 2a3d_A 5 AEFKQRLAAIKTRLQALGGSEAELAAFEK 33 (73)
T ss_dssp HHHHHHHHHHHHHHHHCSSGGGTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 46788888888888887777665444433
No 153
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=38.95 E-value=36 Score=31.41 Aligned_cols=38 Identities=13% Similarity=0.010 Sum_probs=32.3
Q ss_pred EEEEe-cCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCC
Q 037721 12 HVVMF-PWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGN 49 (465)
Q Consensus 12 ~il~~-~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~ 49 (465)
+|+|+ .-|+-|-..=..+||..|+++|++|.++..+..
T Consensus 15 ~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 53 (324)
T 3zq6_A 15 TFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDPA 53 (324)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred EEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 45554 447999999999999999999999999998863
No 154
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=38.42 E-value=1.5e+02 Score=25.44 Aligned_cols=102 Identities=14% Similarity=0.214 Sum_probs=65.2
Q ss_pred HHHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhhhhhcCCCceEEecccchHhhhccccceeecccCChhhHHHHH
Q 037721 289 KELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRHESVGCYVCHSGFSSVTEAV 368 (465)
Q Consensus 289 ~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~~~~~~~ItHgG~~s~~Eal 368 (465)
..+++.++..+..+++..+. ...+|+.+.+..+..-+-+ |+++ .=..-|...+..|+
T Consensus 70 ~~~~~~l~~~~~Dliv~a~y----------~~il~~~~l~~~~~~~iNi-----------HpSL--LP~yrG~~pi~~ai 126 (216)
T 2ywr_A 70 ERMALELKKKGVELVVLAGF----------MRILSHNFLKYFPNKVINI-----------HPSL--IPAFQGLHAQKQAV 126 (216)
T ss_dssp HHHHHHHHHTTCCEEEESSC----------CSCCCHHHHTTSTTCEEEE-----------ESSC--TTTTCSTTHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEeCc----------hhhCCHHHHhhccCCeEEE-----------cCCc--CcCCCCccHHHHHH
Confidence 34778888888999888765 3467777776544333333 4443 33456899999999
Q ss_pred HhCCceeecccc--ccchhhHHHHhhhhcceEEeeecCCCCccCHHHHHHHHHHh
Q 037721 369 ISDCQLVLLPLK--GDQFLNSKLVAGDLKAGVEVNRRDHDGHFGKEDIFKAVKTV 421 (465)
Q Consensus 369 ~~GvP~l~~P~~--~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~l 421 (465)
.+|....++=.+ .+..+.+..+.+. -+.+... -|.++|.+.+.++
T Consensus 127 ~~G~~~tGvTvh~v~~~~D~G~Ii~q~---~~~i~~~-----dt~~~L~~rl~~~ 173 (216)
T 2ywr_A 127 EFGVKFSGCTVHIVDESVDAGPVIVQA---VVPVLPE-----DDENTLADRILKW 173 (216)
T ss_dssp HHTCSEEEEEEEECCSSSSCSCEEEEE---EEECCTT-----CCHHHHHHHHHHH
T ss_pred HcCCCeEEEEEEEEcccCCCCCEEEEE---EEEcCCC-----CCHHHHHHHHHHH
Confidence 999998777653 3444555444443 1223332 5888888877654
No 155
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=37.89 E-value=21 Score=32.89 Aligned_cols=24 Identities=13% Similarity=0.055 Sum_probs=20.8
Q ss_pred HHHHHHHHHHhCCCEEEEEeCCCC
Q 037721 26 PFVQLSNKLSLHGVKVSFFSAPGN 49 (465)
Q Consensus 26 p~l~La~~L~~rGh~V~~~~~~~~ 49 (465)
.-..||+++.++|++|+|++.+..
T Consensus 67 mG~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 67 RGATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp HHHHHHHHHHHTTCEEEEEEETTS
T ss_pred HHHHHHHHHHHCCCEEEEEecCCC
Confidence 567899999999999999987643
No 156
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=37.74 E-value=26 Score=28.43 Aligned_cols=37 Identities=11% Similarity=0.082 Sum_probs=29.9
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCC
Q 037721 10 QLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGN 49 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~ 49 (465)
..++++++.+. | +.|++.+++.|.++|.+|+++ ....
T Consensus 23 ~~~~llIaGG~-G-ItPl~sm~~~l~~~~~~v~l~-g~r~ 59 (158)
T 3lrx_A 23 FGKILAIGAYT-G-IVEVYPIAKAWQEIGNDVTTL-HVTF 59 (158)
T ss_dssp CSEEEEEEETT-H-HHHHHHHHHHHHHHTCEEEEE-EECB
T ss_pred CCeEEEEEccC-c-HHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 45788888774 3 999999999999989999998 5543
No 157
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=37.19 E-value=49 Score=30.60 Aligned_cols=29 Identities=21% Similarity=0.249 Sum_probs=23.6
Q ss_pred cccceeecccCChhhHHHHHH--------hCCceeeccc
Q 037721 349 HESVGCYVCHSGFSSVTEAVI--------SDCQLVLLPL 379 (465)
Q Consensus 349 ~~~~~~~ItHgG~~s~~Eal~--------~GvP~l~~P~ 379 (465)
..++ +|.-||-||+.|++. .++|+.++|.
T Consensus 82 ~~d~--vvv~GGDGTl~~v~~~l~~~~~~~~~plgiiP~ 118 (332)
T 2bon_A 82 GVAT--VIAGGGDGTINEVSTALIQCEGDDIPALGILPL 118 (332)
T ss_dssp TCSE--EEEEESHHHHHHHHHHHHHCCSSCCCEEEEEEC
T ss_pred CCCE--EEEEccchHHHHHHHHHhhcccCCCCeEEEecC
Confidence 3455 999999999999863 5789999996
No 158
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=37.15 E-value=51 Score=28.66 Aligned_cols=66 Identities=8% Similarity=0.092 Sum_probs=44.8
Q ss_pred ccceeecccCChhhHHHHHHhCCceeeccccc-c----------------------chhhHHHHhhhhcceEEeeecCCC
Q 037721 350 ESVGCYVCHSGFSSVTEAVISDCQLVLLPLKG-D----------------------QFLNSKLVAGDLKAGVEVNRRDHD 406 (465)
Q Consensus 350 ~~~~~~ItHgG~~s~~Eal~~GvP~l~~P~~~-D----------------------Q~~na~~v~~~~G~G~~l~~~~~~ 406 (465)
+++ +|+.||...+...- .++|+|-++..+ | ....+..+.+.+|+-+....-
T Consensus 64 ~dV--IISRGgta~~Lr~~-~~iPVV~I~vs~~Dil~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll~~~i~~~~~--- 137 (225)
T 2pju_A 64 CDA--IIAAGSNGAYLKSR-LSVPVILIKPSGYDVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRLDQRSY--- 137 (225)
T ss_dssp CSE--EEEEHHHHHHHHTT-CSSCEEEECCCHHHHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCCEEEEEE---
T ss_pred CeE--EEeCChHHHHHHhh-CCCCEEEecCCHHHHHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHhCCceEEEEe---
Confidence 455 99999999999976 579999999743 2 333445555555665555443
Q ss_pred CccCHHHHHHHHHHhhc
Q 037721 407 GHFGKEDIFKAVKTVMV 423 (465)
Q Consensus 407 ~~~~~~~l~~ai~~ll~ 423 (465)
.+.+++...|+++..
T Consensus 138 --~~~ee~~~~i~~l~~ 152 (225)
T 2pju_A 138 --ITEEDARGQINELKA 152 (225)
T ss_dssp --SSHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHH
Confidence 467777777777654
No 159
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=37.15 E-value=96 Score=29.04 Aligned_cols=39 Identities=15% Similarity=0.128 Sum_probs=31.9
Q ss_pred EEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChh
Q 037721 13 VVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIP 51 (465)
Q Consensus 13 il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~ 51 (465)
+++.-.++.|=..-++.++..+...|..|.|+..+....
T Consensus 64 ~~I~GppGsGKSTLal~la~~~~~~gg~VlyId~E~s~~ 102 (356)
T 3hr8_A 64 VEIFGQESSGKTTLALHAIAEAQKMGGVAAFIDAEHALD 102 (356)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEecccccc
Confidence 445556799999999999999999999999998876443
No 160
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=37.08 E-value=33 Score=31.89 Aligned_cols=28 Identities=21% Similarity=0.355 Sum_probs=23.3
Q ss_pred ccceeecccCChhhHHHHHH------hCCceeeccc
Q 037721 350 ESVGCYVCHSGFSSVTEAVI------SDCQLVLLPL 379 (465)
Q Consensus 350 ~~~~~~ItHgG~~s~~Eal~------~GvP~l~~P~ 379 (465)
.++ +|.-||-||+.|++. .++|+.++|.
T Consensus 81 ~d~--vvv~GGDGTv~~v~~~l~~~~~~~pl~iIP~ 114 (337)
T 2qv7_A 81 YDV--LIAAGGDGTLNEVVNGIAEKPNRPKLGVIPM 114 (337)
T ss_dssp CSE--EEEEECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred CCE--EEEEcCchHHHHHHHHHHhCCCCCcEEEecC
Confidence 345 999999999999863 4689999996
No 161
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=36.93 E-value=1.7e+02 Score=23.90 Aligned_cols=143 Identities=10% Similarity=0.058 Sum_probs=74.2
Q ss_pred CeEEEEEeCCcccCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhhhhhcCCCceEEecccchHhhhcc
Q 037721 270 KSVIYCSFGSETFLTVDQIKELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRH 349 (465)
Q Consensus 270 ~~~v~vs~GS~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~ 349 (465)
+|.|-|-+||.+ +.+..++....|+..|+.+=+.+-. ....|+.+.+ |+.. +..
T Consensus 5 ~p~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~S----------aHRtp~~l~~-----------~~~~---~~~ 58 (166)
T 3oow_A 5 SVQVGVIMGSKS--DWSTMKECCDILDNLGIGYECEVVS----------AHRTPDKMFD-----------YAET---AKE 58 (166)
T ss_dssp CEEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECC----------TTTCHHHHHH-----------HHHH---TTT
T ss_pred CCeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEc----------CcCCHHHHHH-----------HHHH---HHh
Confidence 356777788865 5667777888888888866444433 2344443331 1111 111
Q ss_pred ccceeecccCChhhHHHHH---HhCCceeecccccc---chhhHHHHhhh-hcceEEe-eecCCCCccCHHHHHHHHHHh
Q 037721 350 ESVGCYVCHSGFSSVTEAV---ISDCQLVLLPLKGD---QFLNSKLVAGD-LKAGVEV-NRRDHDGHFGKEDIFKAVKTV 421 (465)
Q Consensus 350 ~~~~~~ItHgG~~s~~Eal---~~GvP~l~~P~~~D---Q~~na~~v~~~-~G~G~~l-~~~~~~~~~~~~~l~~ai~~l 421 (465)
..++.+|+-.|...-+-.+ ..-+|+|.+|...- -.+--.-+.+. -|+++.. .... .+..++.-+...|-.
T Consensus 59 ~g~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~gvpVatV~I~~-ag~~nAa~lAa~Il~- 136 (166)
T 3oow_A 59 RGLKVIIAGAGGAAHLPGMVAAKTTLPVLGVPVKSSTLNGQDSLLSIVQMPAGIPVATFAIGM-AGAKNAALFAASILQ- 136 (166)
T ss_dssp TTCCEEEEEECSSCCHHHHHHHTCSSCEEEEECCCTTTTTHHHHHHHHTCCTTSCCEECCSTH-HHHHHHHHHHHHHHG-
T ss_pred CCCcEEEEECCcchhhHHHHHhccCCCEEEeecCcCCCCCHHHHHHHhcCCCCCceEEEecCC-ccchHHHHHHHHHHc-
Confidence 1233388777754333222 33589999998432 11111122332 0333322 1110 002355555555543
Q ss_pred hcccCCcchHHHHHHHHHHHHHHHc
Q 037721 422 MVDVNKEPGASIRANQKWWREFLLN 446 (465)
Q Consensus 422 l~~~~~~~~~~~~~~a~~l~~~~~~ 446 (465)
+. |++++++.+..++.+++
T Consensus 137 ~~------d~~l~~kl~~~r~~~~~ 155 (166)
T 3oow_A 137 HT------DINIAKALAEFRAEQTR 155 (166)
T ss_dssp GG------CHHHHHHHHHHHHHHHH
T ss_pred CC------CHHHHHHHHHHHHHHHH
Confidence 34 68899999888888763
No 162
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=36.90 E-value=20 Score=32.61 Aligned_cols=30 Identities=13% Similarity=0.129 Sum_probs=24.7
Q ss_pred hccccceeecccCChhhHHHHHHh----CCceeecc
Q 037721 347 LRHESVGCYVCHSGFSSVTEAVIS----DCQLVLLP 378 (465)
Q Consensus 347 L~~~~~~~~ItHgG~~s~~Eal~~----GvP~l~~P 378 (465)
-..+++ +|+-||-||+++++.. ++|++.++
T Consensus 61 ~~~~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~ 94 (292)
T 2an1_A 61 GQQADL--AVVVGGDGNMLGAARTLARYDINVIGIN 94 (292)
T ss_dssp HHHCSE--EEECSCHHHHHHHHHHHTTSSCEEEEBC
T ss_pred ccCCCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEE
Confidence 344566 9999999999999843 88999987
No 163
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=36.79 E-value=3e+02 Score=26.58 Aligned_cols=152 Identities=8% Similarity=-0.055 Sum_probs=75.7
Q ss_pred ccCCCCCCeEEEEEeCCcccCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhhhhhcCCCceEEecccc
Q 037721 263 WLCKYPPKSVIYCSFGSETFLTVDQIKELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQ 342 (465)
Q Consensus 263 ~l~~~~~~~~v~vs~GS~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~p 342 (465)
|++-.+ ++++.|..|..+ ...+..|...|.++.++-... ...+.......++.+..-.-
T Consensus 7 ~~~l~~-~~vlVvGgG~va-------~~k~~~L~~~ga~V~vi~~~~-------------~~~~~~l~~~~~i~~~~~~~ 65 (457)
T 1pjq_A 7 FCQLRD-RDCLIVGGGDVA-------ERKARLLLEAGARLTVNALTF-------------IPQFTVWANEGMLTLVEGPF 65 (457)
T ss_dssp EECCBT-CEEEEECCSHHH-------HHHHHHHHHTTBEEEEEESSC-------------CHHHHHHHTTTSCEEEESSC
T ss_pred EEECCC-CEEEEECCCHHH-------HHHHHHHHhCcCEEEEEcCCC-------------CHHHHHHHhcCCEEEEECCC
Confidence 444433 567777777654 234455566788777664321 11222211212332222112
Q ss_pred hHhhhccccceeecccCChhh-----HHHHHHhCCceeeccccccchhhHHHH-----hhhhcceEEeeecCCCCccCHH
Q 037721 343 QQLILRHESVGCYVCHSGFSS-----VTEAVISDCQLVLLPLKGDQFLNSKLV-----AGDLKAGVEVNRRDHDGHFGKE 412 (465)
Q Consensus 343 q~~vL~~~~~~~~ItHgG~~s-----~~Eal~~GvP~l~~P~~~DQ~~na~~v-----~~~~G~G~~l~~~~~~~~~~~~ 412 (465)
+...|..+++ +|.--|.-. ..+|-..|+|+-+ .|++..+... .+. ++=+.+.... ....-+.
T Consensus 66 ~~~~l~~~~l--Vi~at~~~~~n~~i~~~a~~~~i~vn~----~d~~e~~~~~~pa~~~~~-~l~iaIsT~G-ksp~la~ 137 (457)
T 1pjq_A 66 DETLLDSCWL--AIAATDDDTVNQRVSDAAESRRIFCNV----VDAPKAASFIMPSIIDRS-PLMVAVSSGG-TSPVLAR 137 (457)
T ss_dssp CGGGGTTCSE--EEECCSCHHHHHHHHHHHHHTTCEEEE----TTCTTSSSEECCEEEEET-TEEEEEECTT-SCHHHHH
T ss_pred CccccCCccE--EEEcCCCHHHHHHHHHHHHHcCCEEEE----CCCcccCceEeeeEEEeC-CeEEEEECCC-CChHHHH
Confidence 2333555565 777777653 4456667999733 2333323222 122 3333333221 0123367
Q ss_pred HHHHHHHHhhcccCCcchHHHHHHHHHHHHHHHcC
Q 037721 413 DIFKAVKTVMVDVNKEPGASIRANQKWWREFLLNG 447 (465)
Q Consensus 413 ~l~~ai~~ll~~~~~~~~~~~~~~a~~l~~~~~~~ 447 (465)
.|++.|++.+. +.-..+-+.+.++++++++.
T Consensus 138 ~ir~~ie~~l~----~~~~~~~~~~~~~R~~~~~~ 168 (457)
T 1pjq_A 138 LLREKLESLLP----QHLGQVARYAGQLRARVKKQ 168 (457)
T ss_dssp HHHHHHHHHSC----TTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcc----hhHHHHHHHHHHHHHHHHhh
Confidence 88888888885 11255666677777777653
No 164
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=36.19 E-value=15 Score=33.23 Aligned_cols=51 Identities=10% Similarity=0.031 Sum_probs=35.7
Q ss_pred ccceeecccCChhhHHHHHHh------CCceeeccccccchhhHHHHhhhhcceEEeeecCCCCccCHHHHHHHHHHhhc
Q 037721 350 ESVGCYVCHSGFSSVTEAVIS------DCQLVLLPLKGDQFLNSKLVAGDLKAGVEVNRRDHDGHFGKEDIFKAVKTVMV 423 (465)
Q Consensus 350 ~~~~~~ItHgG~~s~~Eal~~------GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~ll~ 423 (465)
+++ +|+=||-||+++++.. ++|++.+|.. .. |. +. .+.++++.++++++++
T Consensus 36 ~D~--vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G-----------~l-gf---l~------~~~~~~~~~~l~~l~~ 92 (272)
T 2i2c_A 36 PEI--VISIGGDGTFLSAFHQYEERLDEIAFIGIHTG-----------HL-GF---YA------DWRPAEADKLVKLLAK 92 (272)
T ss_dssp CSE--EEEEESHHHHHHHHHHTGGGTTTCEEEEEESS-----------SC-CS---SC------CBCGGGHHHHHHHHHT
T ss_pred CCE--EEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCC-----------CC-Cc---CC------cCCHHHHHHHHHHHHc
Confidence 355 9999999999999875 8999998851 01 21 11 1456777777777776
No 165
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=36.14 E-value=27 Score=30.37 Aligned_cols=38 Identities=8% Similarity=-0.040 Sum_probs=32.7
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 037721 11 LHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPG 48 (465)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~ 48 (465)
++|+|..-||-|=..=...||..|+++|++|.++=.+.
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 36888777899999999999999999999999986554
No 166
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=35.87 E-value=1.1e+02 Score=27.58 Aligned_cols=105 Identities=13% Similarity=0.070 Sum_probs=59.8
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhC--CCEEEEEeCC--CChhhhhcccCCCCCeeEEEccCCCCCCCCCCCCCC
Q 037721 8 ADQLHVVMFPWFAFGHISPFVQLSNKLSLH--GVKVSFFSAP--GNIPRIKSSLNLTPMADIIPLQIPHVDGLPPGLDST 83 (465)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~V~~~~~~--~~~~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~ 83 (465)
.+++||+++..+. || -+-+|..+..+. ..+|..+.+. ......++.| +.+..+| ... .
T Consensus 88 ~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~g-----Ip~~~~~----~~~----~-- 149 (286)
T 3n0v_A 88 NHRPKVVIMVSKA-DH--CLNDLLYRQRIGQLGMDVVAVVSNHPDLEPLAHWHK-----IPYYHFA----LDP----K-- 149 (286)
T ss_dssp TCCCEEEEEESSC-CH--HHHHHHHHHHTTSSCCEEEEEEESSSTTHHHHHHTT-----CCEEECC----CBT----T--
T ss_pred CCCcEEEEEEeCC-CC--CHHHHHHHHHCCCCCcEEEEEEeCcHHHHHHHHHcC-----CCEEEeC----CCc----C--
Confidence 4477898887775 54 344444444332 3677666543 3445566666 8887776 110 0
Q ss_pred CCCchHHHHHHHHHHHhhHHHHHHHHhhcCCcEEEEcCC-CcccccccccccCCeeEEEecc
Q 037721 84 SEMTPHMAELLKQALDLMQPQIKTLLSQLKPHFVFFDFT-HYWLPGLVGSQLGIKTVNFSVF 144 (465)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~vi~D~~-~~~~~~~~A~~~giP~v~~~~~ 144 (465)
. +. .....+.+++++.+||+||.-.+ -.-...+ .+.+.-.++.++++
T Consensus 150 ---~-------r~---~~~~~~~~~l~~~~~Dlivla~y~~il~~~~-l~~~~~~~iNiHpS 197 (286)
T 3n0v_A 150 ---D-------KP---GQERKVLQVIEETGAELVILARYMQVLSPEL-CRRLDGWAINIHHS 197 (286)
T ss_dssp ---B-------HH---HHHHHHHHHHHHHTCSEEEESSCCSCCCHHH-HHHTTTSEEEEEEC
T ss_pred ---C-------HH---HHHHHHHHHHHhcCCCEEEecccccccCHHH-HhhhcCCeEEeccc
Confidence 0 00 12246678888899999886543 2333344 45555567777663
No 167
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=35.68 E-value=1.3e+02 Score=23.30 Aligned_cols=60 Identities=13% Similarity=0.182 Sum_probs=39.5
Q ss_pred hCCceeeccccccchhhHHHHhhhhcceEEeeecCCCCccCHHHHHHHHHHhhcccCCcchHHHHHHHHHHHH
Q 037721 370 SDCQLVLLPLKGDQFLNSKLVAGDLKAGVEVNRRDHDGHFGKEDIFKAVKTVMVDVNKEPGASIRANQKWWRE 442 (465)
Q Consensus 370 ~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~a~~l~~ 442 (465)
..+|+|++--..+ ........+. |+--.+.+. ++.++|..+|++++. ...+++..+.+.+
T Consensus 74 ~~~pii~ls~~~~-~~~~~~~~~~-g~~~~l~kP-----~~~~~L~~~i~~~~~------~~~~~~~~~~~~~ 133 (155)
T 1qkk_A 74 PDLPMILVTGHGD-IPMAVQAIQD-GAYDFIAKP-----FAADRLVQSARRAEE------KRRLVMENRSLRR 133 (155)
T ss_dssp TTSCEEEEECGGG-HHHHHHHHHT-TCCEEEESS-----CCHHHHHHHHHHHHH------HHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC-hHHHHHHHhc-CCCeEEeCC-----CCHHHHHHHHHHHHH------HHHHHHHHHHHHH
Confidence 4788888754444 3444555566 876666664 899999999999998 5555444444333
No 168
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=35.53 E-value=30 Score=31.59 Aligned_cols=80 Identities=9% Similarity=0.037 Sum_probs=46.6
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhhhhhcCCCceEEecccchHhhhcccc
Q 037721 272 VIYCSFGSETFLTVDQIKELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRHES 351 (465)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~~~ 351 (465)
.+.++--|......+.+..+...|+..+..+.+...... ..-. ..+.+ +....+
T Consensus 12 ~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~-------------~~a~-----------~~~~~--~~~~~d 65 (304)
T 3s40_A 12 LLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQ-------------GDAT-----------KYCQE--FASKVD 65 (304)
T ss_dssp EEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCST-------------THHH-----------HHHHH--HTTTCS
T ss_pred EEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccCc-------------chHH-----------HHHHH--hhcCCC
Confidence 344554443323345566677778777777655543221 1000 11111 112334
Q ss_pred ceeecccCChhhHHHHHH------hCCceeeccc
Q 037721 352 VGCYVCHSGFSSVTEAVI------SDCQLVLLPL 379 (465)
Q Consensus 352 ~~~~ItHgG~~s~~Eal~------~GvP~l~~P~ 379 (465)
+ +|.-||-||+.|++. .++|+.++|.
T Consensus 66 ~--vv~~GGDGTl~~v~~~l~~~~~~~~l~iiP~ 97 (304)
T 3s40_A 66 L--IIVFGGDGTVFECTNGLAPLEIRPTLAIIPG 97 (304)
T ss_dssp E--EEEEECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred E--EEEEccchHHHHHHHHHhhCCCCCcEEEecC
Confidence 5 999999999999875 5799999996
No 169
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=35.45 E-value=30 Score=27.25 Aligned_cols=35 Identities=14% Similarity=0.155 Sum_probs=27.5
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 037721 9 DQLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPG 48 (465)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~ 48 (465)
-+.||+++-++..| ..+++.|.++||+|+++....
T Consensus 6 ~~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 6 ICNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CCSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESCH
T ss_pred CCCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECCH
Confidence 35689888776444 478999999999999998664
No 170
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=34.55 E-value=49 Score=30.20 Aligned_cols=41 Identities=20% Similarity=0.163 Sum_probs=32.3
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhccc
Q 037721 11 LHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSSL 57 (465)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~~g 57 (465)
++|+++-.|+.|- .+|..|++.||+|+++.... .+.+.+.|
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~-~~~i~~~g 43 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRRD-YEAIAGNG 43 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHHTSCCEEEECSTT-HHHHHHTC
T ss_pred CEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcCc-HHHHHhCC
Confidence 4799998888874 46889999999999998876 46666666
No 171
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=34.40 E-value=48 Score=30.43 Aligned_cols=46 Identities=22% Similarity=0.160 Sum_probs=35.3
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhcccCCCCCeeEEE
Q 037721 11 LHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSSLNLTPMADIIP 67 (465)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~~g~~~~~~~~~~ 67 (465)
++|+++-.|+.| ..+|..|++.||+|+++.... .+.+.+.| ++...
T Consensus 3 mkI~IiGaGaiG-----~~~a~~L~~~g~~V~~~~r~~-~~~i~~~G-----l~~~~ 48 (320)
T 3i83_A 3 LNILVIGTGAIG-----SFYGALLAKTGHCVSVVSRSD-YETVKAKG-----IRIRS 48 (320)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHTTCEEEEECSTT-HHHHHHHC-----EEEEE
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCCh-HHHHHhCC-----cEEee
Confidence 489999777776 457889999999999998876 46666666 66554
No 172
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=34.24 E-value=1.6e+02 Score=26.60 Aligned_cols=105 Identities=10% Similarity=0.041 Sum_probs=59.9
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhC--CCEEEEEeCC--CChhhhhcccCCCCCeeEEEccCCCCCCCCCCCCCC
Q 037721 8 ADQLHVVMFPWFAFGHISPFVQLSNKLSLH--GVKVSFFSAP--GNIPRIKSSLNLTPMADIIPLQIPHVDGLPPGLDST 83 (465)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~V~~~~~~--~~~~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~ 83 (465)
.+++||+++..+. || -+-+|..+..+. ..+|..+.+. ......++.| +.+..+| ... ..
T Consensus 93 ~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~g-----Ip~~~~~----~~~-~~---- 155 (292)
T 3lou_A 93 AARPKVLIMVSKL-EH--CLADLLFRWKMGELKMDIVGIVSNHPDFAPLAAQHG-----LPFRHFP----ITA-DT---- 155 (292)
T ss_dssp TSCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSSTTHHHHHHTT-----CCEEECC----CCS-SC----
T ss_pred CCCCEEEEEEcCC-Cc--CHHHHHHHHHcCCCCcEEEEEEeCcHHHHHHHHHcC-----CCEEEeC----CCc-CC----
Confidence 3467898877664 54 344555544432 3577666543 3445566777 8888776 110 00
Q ss_pred CCCchHHHHHHHHHHHhhHHHHHHHHhhcCCcEEEEcCC-CcccccccccccCCeeEEEecc
Q 037721 84 SEMTPHMAELLKQALDLMQPQIKTLLSQLKPHFVFFDFT-HYWLPGLVGSQLGIKTVNFSVF 144 (465)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~vi~D~~-~~~~~~~~A~~~giP~v~~~~~ 144 (465)
+. .....+.+++++.+||+||.-.+ -.-...+ .+.+.-.++.++++
T Consensus 156 -----------r~---~~~~~~~~~l~~~~~Dlivla~y~~il~~~~-l~~~~~~~iNiHpS 202 (292)
T 3lou_A 156 -----------KA---QQEAQWLDVFETSGAELVILARYMQVLSPEA-SARLANRAINIHHS 202 (292)
T ss_dssp -----------HH---HHHHHHHHHHHHHTCSEEEESSCCSCCCHHH-HHHTTTSEEEEEEE
T ss_pred -----------HH---HHHHHHHHHHHHhCCCEEEecCchhhCCHHH-HhhhcCCeEEeCCC
Confidence 00 12246678888899999876543 2323344 45555567776653
No 173
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=34.13 E-value=1.8e+02 Score=26.19 Aligned_cols=105 Identities=15% Similarity=0.075 Sum_probs=57.4
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCCC---hhhhhcccCCCCCeeEEEccCCCCCCCCCCCCC
Q 037721 8 ADQLHVVMFPWFAFGHISPFVQLSNKLSLH--GVKVSFFSAPGN---IPRIKSSLNLTPMADIIPLQIPHVDGLPPGLDS 82 (465)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~V~~~~~~~~---~~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~~~ 82 (465)
.+++||+++..+. || -+-+|..+..+. ..+|..+.+... .+..++.| +.+..+| . ..
T Consensus 86 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~~~a~~~~A~~~g-----Ip~~~~~----~----~~-- 147 (287)
T 3nrb_A 86 TDRKKVVIMVSKF-DH--CLGDLLYRHRLGELDMEVVGIISNHPREALSVSLVGD-----IPFHYLP----V----TP-- 147 (287)
T ss_dssp TCCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSCGGGCCCCCCTT-----SCEEECC----C----CG--
T ss_pred CCCcEEEEEEeCC-Cc--CHHHHHHHHHCCCCCeEEEEEEeCChHHHHHHHHHcC-----CCEEEEe----c----cC--
Confidence 3467898877764 44 334555554432 357766654432 23344444 6666665 1 10
Q ss_pred CCCCchHHHHHHHHHHHhhHHHHHHHHhhcCCcEEEEcCC-CcccccccccccCCeeEEEecc
Q 037721 83 TSEMTPHMAELLKQALDLMQPQIKTLLSQLKPHFVFFDFT-HYWLPGLVGSQLGIKTVNFSVF 144 (465)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~vi~D~~-~~~~~~~~A~~~giP~v~~~~~ 144 (465)
.. + ......+.+++++.+||+||.-.+ -.-...+ .+.+.-.++.++++
T Consensus 148 ----~~------r---~~~~~~~~~~l~~~~~Dlivlagym~il~~~~-l~~~~~~~iNiHpS 196 (287)
T 3nrb_A 148 ----AT------K---AAQESQIKNIVTQSQADLIVLARYMQILSDDL-SAFLSGRCINIHHS 196 (287)
T ss_dssp ----GG------H---HHHHHHHHHHHHHHTCSEEEESSCCSCCCHHH-HHHHTTSEEEEESS
T ss_pred ----cc------h---hhHHHHHHHHHHHhCCCEEEhhhhhhhcCHHH-HhhccCCeEEECcc
Confidence 00 0 112346678888899999876543 2333344 55555667777653
No 174
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=33.96 E-value=16 Score=32.73 Aligned_cols=52 Identities=13% Similarity=0.091 Sum_probs=37.3
Q ss_pred cccceeecccCChhhHHHHHHh---CCceeeccccccchhhHHHHhhhhcceEEeeecCCCCccCHHHHHHHHHHhhc
Q 037721 349 HESVGCYVCHSGFSSVTEAVIS---DCQLVLLPLKGDQFLNSKLVAGDLKAGVEVNRRDHDGHFGKEDIFKAVKTVMV 423 (465)
Q Consensus 349 ~~~~~~~ItHgG~~s~~Eal~~---GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~ll~ 423 (465)
.+++ +|+=||-||+++++.. ++|++.++. + .. |.- . .+.++++.++++++++
T Consensus 41 ~~D~--vv~~GGDGTll~~a~~~~~~~PilGIn~-G----------~~-Gfl-----~----~~~~~~~~~al~~i~~ 95 (258)
T 1yt5_A 41 TADL--IVVVGGDGTVLKAAKKAADGTPMVGFKA-G----------RL-GFL-----T----SYTLDEIDRFLEDLRN 95 (258)
T ss_dssp CCSE--EEEEECHHHHHHHHTTBCTTCEEEEEES-S----------SC-CSS-----C----CBCGGGHHHHHHHHHT
T ss_pred CCCE--EEEEeCcHHHHHHHHHhCCCCCEEEEEC-C----------CC-Ccc-----C----cCCHHHHHHHHHHHHc
Confidence 3455 9999999999999877 889988873 1 01 111 1 1567788888888876
No 175
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=33.49 E-value=40 Score=27.78 Aligned_cols=46 Identities=9% Similarity=0.272 Sum_probs=33.3
Q ss_pred hhHHHHHHHHhhcCCcEEEEcCCCcc---------------cccccccccCCeeEEEecchH
Q 037721 100 LMQPQIKTLLSQLKPHFVFFDFTHYW---------------LPGLVGSQLGIKTVNFSVFSA 146 (465)
Q Consensus 100 ~~~~~l~~~l~~~~pD~vi~D~~~~~---------------~~~~~A~~~giP~v~~~~~~~ 146 (465)
.....+.++|++++||.+..+..++. +..+ +...|+|+.-+.|...
T Consensus 50 ~I~~~l~~~i~~~~Pd~vaiE~~F~~~n~~sal~lgqarGv~~la-~~~~glpv~eytP~~v 110 (166)
T 4ep4_A 50 RIHARVLEVLHRFRPEAVAVEEQFFYRQNELAYKVGWALGAVLVA-AFEAGVPVYAYGPMQV 110 (166)
T ss_dssp HHHHHHHHHHHHHCCSEEEEECCCCSSCSHHHHHHHHHHHHHHHH-HHHHTCCEEEECHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEeehhhccChHHHHHHHHHHHHHHHH-HHHcCCCEEEECHHHH
Confidence 35678899999999999888765443 1234 6688999888866543
No 176
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=33.27 E-value=53 Score=26.59 Aligned_cols=95 Identities=12% Similarity=0.068 Sum_probs=62.6
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCCChhhhhc-ccCCCCCeeEEEccCCCCCCCCCCCCCCCCCc
Q 037721 11 LHVVMFPWFAFGHISPFVQLSNKLSLH--GVKVSFFSAPGNIPRIKS-SLNLTPMADIIPLQIPHVDGLPPGLDSTSEMT 87 (465)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~V~~~~~~~~~~~i~~-~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 87 (465)
.+|+++.. -.+=.-++.+|+.|.+. ||++ +.+......+++ .| +.+..+. ..+.+
T Consensus 12 g~V~lsv~--D~dK~~~v~~ak~~~~ll~Gf~l--~AT~gTa~~L~e~~G-----l~v~~v~-----k~~eG-------- 69 (152)
T 1b93_A 12 KHIALVAH--DHCKQMLMSWVERHQPLLEQHVL--YATGTTGNLISRATG-----MNVNAML-----SGPMG-------- 69 (152)
T ss_dssp CEEEEEEC--GGGHHHHHHHHHHTHHHHTTSEE--EEETTHHHHHHHHHC-----CCCEEEC-----CGGGT--------
T ss_pred CEEEEEEe--hhhHHHHHHHHHHHHHHhCCCEE--EEccHHHHHHHHHhC-----ceeEEEE-----ecCCC--------
Confidence 34544433 23446789999999998 9965 456777777877 77 6666553 11111
Q ss_pred hHHHHHHHHHHHhhHHHHHHHHhhcCCcEEEEcCC--Cccc--------ccccccccCCeeEEE
Q 037721 88 PHMAELLKQALDLMQPQIKTLLSQLKPHFVFFDFT--HYWL--------PGLVGSQLGIKTVNF 141 (465)
Q Consensus 88 ~~~~~~~~~~~~~~~~~l~~~l~~~~pD~vi~D~~--~~~~--------~~~~A~~~giP~v~~ 141 (465)
-.+.+.+.|++.+.|+||.-.- ..-. ..+ |-..+||++..
T Consensus 70 -------------G~p~I~d~I~~geIdlVInt~~pl~~~~h~~D~~~IrR~-A~~~~IP~~T~ 119 (152)
T 1b93_A 70 -------------GDQQVGALISEGKIDVLIFFWDPLNAVPHDPDVKALLRL-ATVWNIPVATN 119 (152)
T ss_dssp -------------HHHHHHHHHHTTCCCEEEEECCTTSCCTTHHHHHHHHHH-HHHTTCCEESS
T ss_pred -------------CCchHHHHHHCCCccEEEEcCCcccCCcccccHHHHHHH-HHHcCCCEEeC
Confidence 1256788899999999997542 2111 246 88999998864
No 177
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=33.06 E-value=65 Score=29.05 Aligned_cols=41 Identities=10% Similarity=0.075 Sum_probs=24.0
Q ss_pred CCCCCCcEEEE-ecCCCccCHHHHH--HHHHHHHhCCCEEEEEe
Q 037721 5 SAEADQLHVVM-FPWFAFGHISPFV--QLSNKLSLHGVKVSFFS 45 (465)
Q Consensus 5 ~~~~~~~~il~-~~~~~~GH~~p~l--~La~~L~~rGh~V~~~~ 45 (465)
...++.+||++ ...|-..-++-.+ .+.+.|.+.||+|+++-
T Consensus 17 ~~~m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~D 60 (280)
T 4gi5_A 17 NLYFQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSD 60 (280)
T ss_dssp -----CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred cchhhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 34466778866 5556544444322 35677888999999863
No 178
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=32.79 E-value=44 Score=30.81 Aligned_cols=44 Identities=14% Similarity=-0.075 Sum_probs=32.1
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCC---Chhhhhccc
Q 037721 10 QLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPG---NIPRIKSSL 57 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~---~~~~i~~~g 57 (465)
..||.|+-.++.| +-.+|+.|.++||+|+..=... ..+.+++.|
T Consensus 4 ~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~g 50 (326)
T 3eag_A 4 MKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALG 50 (326)
T ss_dssp CCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTT
T ss_pred CcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCC
Confidence 4589999998887 5569999999999999874432 223455555
No 179
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=32.55 E-value=39 Score=28.67 Aligned_cols=30 Identities=7% Similarity=0.080 Sum_probs=24.2
Q ss_pred cceeecccCChhhHHHHHHhCCceeeccccc
Q 037721 351 SVGCYVCHSGFSSVTEAVISDCQLVLLPLKG 381 (465)
Q Consensus 351 ~~~~~ItHgG~~s~~Eal~~GvP~l~~P~~~ 381 (465)
.++.+|+.||.......- .++|+|-+|..+
T Consensus 51 ~~dVIISRGgta~~lr~~-~~iPVV~I~~s~ 80 (196)
T 2q5c_A 51 EVDAIISRGATSDYIKKS-VSIPSISIKVTR 80 (196)
T ss_dssp TCSEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CCeEEEECChHHHHHHHh-CCCCEEEEcCCH
Confidence 334499999999999976 579999999743
No 180
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=31.88 E-value=56 Score=24.51 Aligned_cols=34 Identities=9% Similarity=0.053 Sum_probs=26.5
Q ss_pred CccCHHHHHHHHHHHHhC-CC-EEEEEeCCCChhhh
Q 037721 20 AFGHISPFVQLSNKLSLH-GV-KVSFFSAPGNIPRI 53 (465)
Q Consensus 20 ~~GH~~p~l~La~~L~~r-Gh-~V~~~~~~~~~~~i 53 (465)
+.......+.+|..+.+. || +|.++........+
T Consensus 14 ~~~~~~~al~~a~~~~~~~g~~~v~vff~~dgV~~~ 49 (117)
T 1jx7_A 14 GSESLFNSLRLAIALREQESNLDLRLFLMSDAVTAG 49 (117)
T ss_dssp TCSHHHHHHHHHHHHHHHCTTCEEEEEECGGGGGGG
T ss_pred CcHHHHHHHHHHHHHHhcCCCccEEEEEEchHHHHH
Confidence 345567789999999998 99 99998877655444
No 181
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=31.49 E-value=1.7e+02 Score=24.63 Aligned_cols=55 Identities=11% Similarity=0.027 Sum_probs=35.8
Q ss_pred HHhCCceeeccc----cccc---hhhHHHHhhhhcceEEeeecC-----------C-CCccCHHHHHHHHHHhhc
Q 037721 368 VISDCQLVLLPL----KGDQ---FLNSKLVAGDLKAGVEVNRRD-----------H-DGHFGKEDIFKAVKTVMV 423 (465)
Q Consensus 368 l~~GvP~l~~P~----~~DQ---~~na~~v~~~~G~G~~l~~~~-----------~-~~~~~~~~l~~ai~~ll~ 423 (465)
+..++|++++|- .+.. ..|..++.+. |+=+..+..+ . ..-.+.++|.+.+.+.+.
T Consensus 112 ~a~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~~-G~~iv~p~~g~~f~lacg~~g~~g~~~~~~~iv~~v~~~l~ 185 (194)
T 1p3y_1 112 LAHPHNTIFFPNMNDLMWNKTVVSRNIEQLRKD-GHIVIEPVEIMAFEIATGTRKPNRGLITPDKALLAIEKGFK 185 (194)
T ss_dssp HHSSSCCEEEECCCHHHHTCHHHHHHHHHHHHH-TCEECCCBCCC------------CBCCCHHHHHHHHHHHCC
T ss_pred HHcCCCEEEEECCChhhcCCHHHHHHHHHHHHC-CCEEECCCCCcccccccCCcCcCCCCCCHHHHHHHHHHHhc
Confidence 567899999994 2222 4567777776 8854433322 1 122578889888888886
No 182
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=30.63 E-value=29 Score=32.19 Aligned_cols=43 Identities=14% Similarity=0.211 Sum_probs=31.8
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhccc
Q 037721 10 QLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSSL 57 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~~g 57 (465)
.+||.|+-.|..| ..+|..|++.||+|+++......+.+.+.|
T Consensus 3 ~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~~~~~~~~~~g 45 (335)
T 3ghy_A 3 LTRICIVGAGAVG-----GYLGARLALAGEAINVLARGATLQALQTAG 45 (335)
T ss_dssp CCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCHHHHHHHHHTC
T ss_pred CCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEEChHHHHHHHHCC
Confidence 3579999777666 457899999999999998754344455555
No 183
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=30.51 E-value=54 Score=25.95 Aligned_cols=35 Identities=9% Similarity=0.050 Sum_probs=29.1
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 037721 10 QLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAP 47 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~ 47 (465)
..++++++.+. =+.|++.+++.|.++|.+|+++ ..
T Consensus 18 ~~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~-g~ 52 (142)
T 3lyu_A 18 FGKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HV 52 (142)
T ss_dssp CSEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE-EE
T ss_pred CCeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE-Ee
Confidence 35788888774 4899999999999999999998 44
No 184
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=30.36 E-value=1e+02 Score=27.78 Aligned_cols=78 Identities=12% Similarity=0.066 Sum_probs=50.2
Q ss_pred CEEEEEeCCCChhhhhcccCCCCCeeEEEccCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhHHHHHHHHhhcCCcEEE
Q 037721 39 VKVSFFSAPGNIPRIKSSLNLTPMADIIPLQIPHVDGLPPGLDSTSEMTPHMAELLKQALDLMQPQIKTLLSQLKPHFVF 118 (465)
Q Consensus 39 h~V~~~~~~~~~~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~vi 118 (465)
.+..+++++.+.-+.+..| ++...+. +...+.+. .+ .....+.+.+++.+..+|+
T Consensus 179 ~~~~v~~H~af~Yf~~~yG-----l~~~~~~-----~~~~~~ep---s~------------~~l~~l~~~ik~~~v~~if 233 (286)
T 3gi1_A 179 SKTFVTQHTAFSYLAKRFG-----LKQLGIS-----GISPEQEP---SP------------RQLKEIQDFVKEYNVKTIF 233 (286)
T ss_dssp CCEEEEEESCCHHHHHHTT-----CEEEEEE-----CSCC---C---CH------------HHHHHHHHHHHHTTCCEEE
T ss_pred CCEEEEECCchHHHHHHCC-----CeEeecc-----ccCCCCCC---CH------------HHHHHHHHHHHHcCCCEEE
Confidence 4445566777777778888 8877764 22111111 01 1235667788888999999
Q ss_pred EcCCCccc--ccccccccCCeeEEEe
Q 037721 119 FDFTHYWL--PGLVGSQLGIKTVNFS 142 (465)
Q Consensus 119 ~D~~~~~~--~~~~A~~~giP~v~~~ 142 (465)
++...... ..+ |+..|++++.+.
T Consensus 234 ~e~~~~~~~~~~l-a~~~g~~v~~l~ 258 (286)
T 3gi1_A 234 AEDNVNPKIAHAI-AKSTGAKVKTLS 258 (286)
T ss_dssp ECTTSCTHHHHHH-HHTTTCEEEECC
T ss_pred EeCCCChHHHHHH-HHHhCCeEEEec
Confidence 99855443 356 999999988753
No 185
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=30.31 E-value=57 Score=26.57 Aligned_cols=46 Identities=7% Similarity=0.174 Sum_probs=32.7
Q ss_pred hhHHHHHHHHhhcCCcEEEEcCCCccc---------------ccccccccCCeeEEEecchH
Q 037721 100 LMQPQIKTLLSQLKPHFVFFDFTHYWL---------------PGLVGSQLGIKTVNFSVFSA 146 (465)
Q Consensus 100 ~~~~~l~~~l~~~~pD~vi~D~~~~~~---------------~~~~A~~~giP~v~~~~~~~ 146 (465)
.....+.+++++++||.+..+-.++.. ..+ +...|+|+..+.|...
T Consensus 46 ~i~~~l~~~i~~~~Pd~vaiE~vf~~~n~~s~~~lgqarGv~~~a-~~~~~ipv~eytp~~v 106 (158)
T 1hjr_A 46 LIYAGVTEIITQFQPDYFAIEQVFMAKNADSALKLGQARGVAIVA-AVNQELPVFEYAARQV 106 (158)
T ss_dssp HHHHHHHHHHHHHCCSEEEEEECCCCCCTTTHHHHHHHHHHHHHH-HHTTTCCEEEEEHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEeecccccChHHHHHHHHHHHHHHHH-HHHcCCCEEEECHHHH
Confidence 355778999999999998887544321 234 6778999888766543
No 186
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=30.19 E-value=1e+02 Score=27.89 Aligned_cols=105 Identities=10% Similarity=0.097 Sum_probs=57.5
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCC---ChhhhhcccCCCCCeeEEEccCCCCCCCCCCCCC
Q 037721 8 ADQLHVVMFPWFAFGHISPFVQLSNKLSLH--GVKVSFFSAPG---NIPRIKSSLNLTPMADIIPLQIPHVDGLPPGLDS 82 (465)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~V~~~~~~~---~~~~i~~~g~~~~~~~~~~l~~~~~~~~~~~~~~ 82 (465)
.+++||+++..+. || -+-+|..+..+. ..+|.++.... ..+..++.| +.+..+| .. . .
T Consensus 87 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~p~~~~~~A~~~g-----Ip~~~~~----~~---~-~- 149 (288)
T 3obi_A 87 ETRRKVMLLVSQS-DH--CLADILYRWRVGDLHMIPTAIVSNHPRETFSGFDFGD-----IPFYHFP----VN---K-D- 149 (288)
T ss_dssp TSCEEEEEEECSC-CH--HHHHHHHHHHTTSSCEEEEEEEESSCGGGSCCTTTTT-----CCEEECC----CC---T-T-
T ss_pred CCCcEEEEEEcCC-CC--CHHHHHHHHHCCCCCeEEEEEEcCCChhHHHHHHHcC-----CCEEEeC----CC---c-c-
Confidence 3477898877764 54 333444444332 24666665433 334455555 7777775 11 0 0
Q ss_pred CCCCchHHHHHHHHHHHhhHHHHHHHHhhcCCcEEEEcCC-CcccccccccccCCeeEEEecc
Q 037721 83 TSEMTPHMAELLKQALDLMQPQIKTLLSQLKPHFVFFDFT-HYWLPGLVGSQLGIKTVNFSVF 144 (465)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~vi~D~~-~~~~~~~~A~~~giP~v~~~~~ 144 (465)
. + ......+.+++++.+||+||.-.+ -.-...+ .+.+.-.++.++++
T Consensus 150 ----~-------r---~~~~~~~~~~l~~~~~Dlivlagy~~il~~~~-l~~~~~~~iNiHpS 197 (288)
T 3obi_A 150 ----T-------R---RQQEAAITALIAQTHTDLVVLARYMQILSDEM-SARLAGRCINIHHS 197 (288)
T ss_dssp ----T-------H---HHHHHHHHHHHHHHTCCEEEESSCCSCCCHHH-HHHTTTSEEEEEEE
T ss_pred ----c-------H---HHHHHHHHHHHHhcCCCEEEhhhhhhhCCHHH-HhhhcCCeEEeCcc
Confidence 0 0 012246678888899999886543 2323344 45555567776653
No 187
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=30.13 E-value=1.8e+02 Score=21.93 Aligned_cols=48 Identities=4% Similarity=0.045 Sum_probs=30.3
Q ss_pred hCCceeeccccccchhhHHHHhhhhcceEEeeecCCCCccCHHHHHHHHHHhhc
Q 037721 370 SDCQLVLLPLKGDQFLNSKLVAGDLKAGVEVNRRDHDGHFGKEDIFKAVKTVMV 423 (465)
Q Consensus 370 ~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~ll~ 423 (465)
...|+|++--..|.......+... |+--.+.+. ++.++|..+|++++.
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~~~~-ga~~~l~KP-----~~~~~L~~~i~~~~~ 118 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAINDA-GIHQFLTKP-----WHPEQLLSSARNAAR 118 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHHHHT-TCCEEEESS-----CCHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHhh-chhhhccCC-----CCHHHHHHHHHHHHH
Confidence 457777765444443333333333 554455553 799999999999987
No 188
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=29.71 E-value=32 Score=31.66 Aligned_cols=43 Identities=19% Similarity=0.257 Sum_probs=31.6
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhhccc
Q 037721 10 QLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSSL 57 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~~i~~~g 57 (465)
+++|+|+-.|+.| ..+|..|++.||+|+++..+...+.+.+.|
T Consensus 19 ~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~~~~~~~~~i~~~g 61 (318)
T 3hwr_A 19 GMKVAIMGAGAVG-----CYYGGMLARAGHEVILIARPQHVQAIEATG 61 (318)
T ss_dssp -CEEEEESCSHHH-----HHHHHHHHHTTCEEEEECCHHHHHHHHHHC
T ss_pred CCcEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcHhHHHHHHhCC
Confidence 5789999888777 567899999999999994433445555555
No 189
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=28.77 E-value=93 Score=31.82 Aligned_cols=94 Identities=13% Similarity=0.123 Sum_probs=0.0
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCC-----------ChhhhhcccCCCCCeeEEEccCCCCCCCCCC
Q 037721 11 LHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPG-----------NIPRIKSSLNLTPMADIIPLQIPHVDGLPPG 79 (465)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~-----------~~~~i~~~g~~~~~~~~~~l~~~~~~~~~~~ 79 (465)
+||+|+..|..|-.+ -++|.++||+|..+.+.. ..+..++.| +.+.... .....
T Consensus 1 ~ri~~~~s~~~~~~~-----l~~l~~~~~~i~~v~t~~~~~~~~~~~~~~~~~a~~~~-----ip~~~~~-----~~~~~ 65 (660)
T 1z7e_A 1 MKTVVFAYHDMGCLG-----IEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERG-----IPVYAPD-----NVNHP 65 (660)
T ss_dssp CEEEEEECHHHHHHH-----HHHHHHTTCEEEEEECCCC--------CCHHHHHHHHT-----CCEECCS-----CTTSH
T ss_pred CEEEEEEeCHHHHHH-----HHHHHhCCCCEEEEEeCCCCCccCcCccHHHHHHHHcC-----CCEeccC-----CCCcH
Q ss_pred CCCCCCCchHHHHHHHHHHHhhHHHHHHHHhhcCCcE-EEEcCCCcccccccccccCCeeEEEecc
Q 037721 80 LDSTSEMTPHMAELLKQALDLMQPQIKTLLSQLKPHF-VFFDFTHYWLPGLVGSQLGIKTVNFSVF 144 (465)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~-vi~D~~~~~~~~~~A~~~giP~v~~~~~ 144 (465)
.+.+.+++.+||+ |++.+.-.-...+ -+.....++.++++
T Consensus 66 ------------------------~~~~~l~~~~~d~iv~~~~~~il~~~~-l~~~~~~~iNiH~s 106 (660)
T 1z7e_A 66 ------------------------LWVERIAQLSPDVIFSFYYRHLIYDEI-LQLAPAGAFNLHGS 106 (660)
T ss_dssp ------------------------HHHHHHHHHCCSEEEEESCCSCCCHHH-HTTCTTCEEEEESS
T ss_pred ------------------------HHHHHHHhcCCCEEEEcCcccccCHHH-HhcCCCCeEEecCC
No 190
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=28.76 E-value=58 Score=26.71 Aligned_cols=37 Identities=22% Similarity=0.446 Sum_probs=28.0
Q ss_pred cEEEEecCCCc--c-CHHHHHHHHHHHHhCCCEEEEEeCC
Q 037721 11 LHVVMFPWFAF--G-HISPFVQLSNKLSLHGVKVSFFSAP 47 (465)
Q Consensus 11 ~~il~~~~~~~--G-H~~p~l~La~~L~~rGh~V~~~~~~ 47 (465)
.+|+++|.=+. . -..+.-.|++.|.++|.+|.|..++
T Consensus 24 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 63 (180)
T 1pno_A 24 SKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHP 63 (180)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 36777765211 1 2368999999999999999999877
No 191
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=28.63 E-value=34 Score=31.28 Aligned_cols=37 Identities=22% Similarity=0.282 Sum_probs=27.7
Q ss_pred CCCCCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 037721 4 ESAEADQLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFS 45 (465)
Q Consensus 4 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~ 45 (465)
|+.....++|.|+-.+..| ..+|+.|++.||+|+++.
T Consensus 3 m~~~~~~~~IgiIG~G~mG-----~~~A~~l~~~G~~V~~~d 39 (306)
T 3l6d_A 3 LSDESFEFDVSVIGLGAMG-----TIMAQVLLKQGKRVAIWN 39 (306)
T ss_dssp CCCCCCSCSEEEECCSHHH-----HHHHHHHHHTTCCEEEEC
T ss_pred CCcccCCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEe
Confidence 4445556789999766555 368999999999998874
No 192
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=28.28 E-value=59 Score=26.74 Aligned_cols=37 Identities=27% Similarity=0.369 Sum_probs=28.0
Q ss_pred cEEEEecCCC--cc-CHHHHHHHHHHHHhCCCEEEEEeCC
Q 037721 11 LHVVMFPWFA--FG-HISPFVQLSNKLSLHGVKVSFFSAP 47 (465)
Q Consensus 11 ~~il~~~~~~--~G-H~~p~l~La~~L~~rGh~V~~~~~~ 47 (465)
.+|+++|.=+ .. -..+.-.|++.|.++|.+|.|..++
T Consensus 23 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 62 (184)
T 1d4o_A 23 NSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHP 62 (184)
T ss_dssp SEEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 3677776521 11 2358999999999999999999877
No 193
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=28.22 E-value=24 Score=27.38 Aligned_cols=39 Identities=3% Similarity=-0.113 Sum_probs=25.7
Q ss_pred HHHHHHhhcCCcEEEEcCCCccc--cccccc---ccCCeeEEEec
Q 037721 104 QIKTLLSQLKPHFVFFDFTHYWL--PGLVGS---QLGIKTVNFSV 143 (465)
Q Consensus 104 ~l~~~l~~~~pD~vi~D~~~~~~--~~~~A~---~~giP~v~~~~ 143 (465)
.-.+++++.+||+||.|...+.. ..+ ++ ..++|+|.++.
T Consensus 44 eAl~~~~~~~~DlvllDi~mP~~~G~el-~~~lr~~~ipvI~lTa 87 (123)
T 2lpm_A 44 EALDIARKGQFDIAIIDVNLDGEPSYPV-ADILAERNVPFIFATG 87 (123)
T ss_dssp HHHHHHHHCCSSEEEECSSSSSCCSHHH-HHHHHHTCCSSCCBCT
T ss_pred HHHHHHHhCCCCEEEEecCCCCCCHHHH-HHHHHcCCCCEEEEec
Confidence 33456677899999999876652 333 43 34788776543
No 194
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=27.74 E-value=60 Score=26.46 Aligned_cols=27 Identities=22% Similarity=0.266 Sum_probs=21.2
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHHhc
Q 037721 272 VIYCSFGSETFLTVDQIKELAIGLEIT 298 (465)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~i~~al~~~ 298 (465)
+.|+++||......+.+...+..|...
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~ 28 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDI 28 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTS
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcC
Confidence 579999998765667788888888764
No 195
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=27.55 E-value=72 Score=24.22 Aligned_cols=65 Identities=12% Similarity=0.049 Sum_probs=44.0
Q ss_pred hccccceeecccCChhh---------HHHHHHhCCceeeccccccchhhHHHHhhhhcceEEeeecCCCCccCHHHHHHH
Q 037721 347 LRHESVGCYVCHSGFSS---------VTEAVISDCQLVLLPLKGDQFLNSKLVAGDLKAGVEVNRRDHDGHFGKEDIFKA 417 (465)
Q Consensus 347 L~~~~~~~~ItHgG~~s---------~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~a 417 (465)
+..+++ +|.-.|..| +-.|...|+|++++=-++.+. .-..+++. +.. +-. -+.+.|.++
T Consensus 36 I~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l~~~-a~~--iV~------Wn~~~I~~a 103 (111)
T 1eiw_A 36 PEDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPELEAV-SSE--VVG------WNPHCIRDA 103 (111)
T ss_dssp SSSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTHHHH-CSE--EEC------SCHHHHHHH
T ss_pred cccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHHHhh-Cce--ecc------CCHHHHHHH
Confidence 445666 888888877 667888999999877666542 22224544 333 222 588999999
Q ss_pred HHHhhc
Q 037721 418 VKTVMV 423 (465)
Q Consensus 418 i~~ll~ 423 (465)
|+..++
T Consensus 104 I~~~~~ 109 (111)
T 1eiw_A 104 LEDALD 109 (111)
T ss_dssp HHHHHC
T ss_pred HHhccC
Confidence 988764
No 196
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=27.44 E-value=4.2e+02 Score=25.38 Aligned_cols=137 Identities=10% Similarity=0.045 Sum_probs=73.5
Q ss_pred CeEEEEEeCCcccCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhhhhhcCCCceEEecccchHhhhcc
Q 037721 270 KSVIYCSFGSETFLTVDQIKELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRH 349 (465)
Q Consensus 270 ~~~v~vs~GS~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~ 349 (465)
.+.|-|-+||.+ +.+..++....++..|+++=+-+.+ ....|+...+ ++-+-+ -..
T Consensus 265 ~~~V~Ii~gs~S--D~~~~~~a~~~l~~~gi~~~v~V~s----------aHR~p~~~~~-----------~~~~~~-~~g 320 (425)
T 2h31_A 265 QCRVVVLMGSTS--DLGHCEKIKKACGNFGIPCELRVTS----------AHKGPDETLR-----------IKAEYE-GDG 320 (425)
T ss_dssp CCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECC----------TTTCHHHHHH-----------HHHHHH-TTC
T ss_pred CCeEEEEecCcc--cHHHHHHHHHHHHHcCCceEEeeee----------ccCCHHHHHH-----------HHHHHH-HCC
Confidence 456778888865 5677777888888888886544433 2344443221 111000 001
Q ss_pred c-cceeecccCChh----hHHHHHHhCCceeeccccccchhhHHH--Hhh--hhcceEEeeecCCCCccCHHHHHHHHHH
Q 037721 350 E-SVGCYVCHSGFS----SVTEAVISDCQLVLLPLKGDQFLNSKL--VAG--DLKAGVEVNRRDHDGHFGKEDIFKAVKT 420 (465)
Q Consensus 350 ~-~~~~~ItHgG~~----s~~Eal~~GvP~l~~P~~~DQ~~na~~--v~~--~~G~G~~l~~~~~~~~~~~~~l~~ai~~ 420 (465)
. .+ +|.-+|.. ++.-++ .-+|+|.+|....-...... +.+ . |+.+..-.. ..++.-++..|..
T Consensus 321 ~~~v--iIa~AG~~a~Lpgvva~~-t~~PVIgvP~~~~~~G~daLls~vqmp~-g~pvatv~~----~~nAa~~A~~Il~ 392 (425)
T 2h31_A 321 IPTV--FVAVAGRSNGLGPVMSGN-TAYPVISCPPLTPDWGVQDVWSSLRLPS-GLGCSTVLS----PEGSAQFAAQIFG 392 (425)
T ss_dssp CCEE--EEEECCSSCCHHHHHHHH-CSSCEEECCCCCTTTHHHHGGGTSSCCS-SCCCEECCC----HHHHHHHHHHHHH
T ss_pred CCeE--EEEEcCcccchHhHHhcc-CCCCEEEeeCccccccHHHHHHHhcCCC-CCceEEecC----chHHHHHHHHHHc
Confidence 1 23 77766653 333333 47899999984211111111 223 2 444322211 2566666666653
Q ss_pred hhcccCCcchHHHHHHHHHHHHHHH
Q 037721 421 VMVDVNKEPGASIRANQKWWREFLL 445 (465)
Q Consensus 421 ll~~~~~~~~~~~~~~a~~l~~~~~ 445 (465)
+. ++.++++.+..+...+
T Consensus 393 -~~------~~~l~~kl~~~~~~~~ 410 (425)
T 2h31_A 393 -LS------NHLVWSKLRASILNTW 410 (425)
T ss_dssp -TT------CHHHHHHHHHHHHHHH
T ss_pred -cC------CHHHHHHHHHHHHHHH
Confidence 44 6788888777777664
No 197
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=27.31 E-value=84 Score=29.33 Aligned_cols=27 Identities=15% Similarity=0.202 Sum_probs=20.8
Q ss_pred cccceeecccCChhhH---HHHHHhCCceeec
Q 037721 349 HESVGCYVCHSGFSSV---TEAVISDCQLVLL 377 (465)
Q Consensus 349 ~~~~~~~ItHgG~~s~---~Eal~~GvP~l~~ 377 (465)
.+++ +|++||.-++ +-|...|+|+++.
T Consensus 92 ~PDv--Vi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 92 RPVC--VLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp CCSE--EEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred CCCE--EEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 4666 9999998764 5567789999863
No 198
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=27.03 E-value=48 Score=25.47 Aligned_cols=33 Identities=15% Similarity=0.319 Sum_probs=24.0
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 037721 10 QLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAP 47 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~ 47 (465)
.++|+++-. |.+- ..+++.|.++||+|+++...
T Consensus 4 ~m~i~IiG~---G~iG--~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGI---GRVG--YTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECC---CHHH--HHHHHHHHhCCCeEEEEECC
Confidence 357888733 5553 35789999999999998754
No 199
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=26.84 E-value=1.1e+02 Score=27.18 Aligned_cols=33 Identities=18% Similarity=0.137 Sum_probs=22.5
Q ss_pred CCcEEE-EcCCC-cccccccccccCCeeEEEecchH
Q 037721 113 KPHFVF-FDFTH-YWLPGLVGSQLGIKTVNFSVFSA 146 (465)
Q Consensus 113 ~pD~vi-~D~~~-~~~~~~~A~~~giP~v~~~~~~~ 146 (465)
.||+|| .|... .-+..= |..+|||+|.+..+.+
T Consensus 158 ~Pdll~V~Dp~~e~~Ai~E-A~~l~IPvIaivDTn~ 192 (256)
T 2vqe_B 158 LPDAIFVVDPTKEAIAVRE-ARKLFIPVIALADTDS 192 (256)
T ss_dssp CCSEEEESCTTTTHHHHHH-HHHTTCCCEECCCTTS
T ss_pred CCCEEEEeCCccchHHHHH-HHHcCCCEEEEecCCC
Confidence 699855 56532 234566 7889999999865443
No 200
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=26.48 E-value=44 Score=33.03 Aligned_cols=36 Identities=14% Similarity=0.121 Sum_probs=28.0
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 037721 8 ADQLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPG 48 (465)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~ 48 (465)
.+|+|||++-.+.-| +.+|+.|.++|++||++...+
T Consensus 40 ~~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 40 SDKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp CSSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESSS
T ss_pred CCCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCCC
Confidence 347899998776444 578999999999999997653
No 201
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=26.47 E-value=59 Score=28.90 Aligned_cols=39 Identities=10% Similarity=0.079 Sum_probs=31.5
Q ss_pred CCcEEEEecCC---CccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 037721 9 DQLHVVMFPWF---AFGHISPFVQLSNKLSLHGVKVSFFSAP 47 (465)
Q Consensus 9 ~~~~il~~~~~---~~GH~~p~l~La~~L~~rGh~V~~~~~~ 47 (465)
.++|++|++.+ +.|-=.-.-.|+..|.+||++|+..=-+
T Consensus 21 ~~mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~KiD 62 (294)
T 2c5m_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKID 62 (294)
T ss_dssp CCCEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEEE
T ss_pred eceEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEecC
Confidence 35789999987 5566678889999999999999986433
No 202
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=26.34 E-value=70 Score=32.23 Aligned_cols=43 Identities=7% Similarity=-0.188 Sum_probs=37.7
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChh
Q 037721 9 DQLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIP 51 (465)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~ 51 (465)
++.+|++.+.++-.|-....-++..|..+|++|++++..-..+
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e 139 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAE 139 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHH
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHH
Confidence 4679999999999999999999999999999999987664433
No 203
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=26.33 E-value=17 Score=19.07 Aligned_cols=17 Identities=12% Similarity=0.335 Sum_probs=14.0
Q ss_pred ChhhHHHHHHhCCceee
Q 037721 360 GFSSVTEAVISDCQLVL 376 (465)
Q Consensus 360 G~~s~~Eal~~GvP~l~ 376 (465)
|.|+++..++.|.|.++
T Consensus 1 giGa~LKVLa~~LP~li 17 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALI 17 (26)
T ss_pred CchHHHHHHHccchHHH
Confidence 67888899999988765
No 204
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=26.03 E-value=6e+02 Score=26.78 Aligned_cols=55 Identities=13% Similarity=0.111 Sum_probs=34.6
Q ss_pred ecccCChhhHHHHHHhC-Cc--e--eeccccccchhhHHHHhhhhcceEEeeecCCCCccCHHHHHHHHHHhhc
Q 037721 355 YVCHSGFSSVTEAVISD-CQ--L--VLLPLKGDQFLNSKLVAGDLKAGVEVNRRDHDGHFGKEDIFKAVKTVMV 423 (465)
Q Consensus 355 ~ItHgG~~s~~Eal~~G-vP--~--l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~ll~ 423 (465)
|+.||--+.+.|.++-. .| + +.+|-.++--.-...++.. .++++.|.+++.+++.
T Consensus 727 ~~~gGlgsaV~ell~~r~~~~~l~v~G~~d~G~tgtp~eLl~~~--------------gld~~~Iv~~a~~~l~ 786 (845)
T 3ahc_A 727 FAYHSYAQDVRGLIYDRPNHDNFHVVGYKEQGSTTTPFDMVRVN--------------DMDRYALQAAALKLID 786 (845)
T ss_dssp EEESSCHHHHHHHTTTSTTGGGEEEECCCSCCCSCCHHHHHHTT--------------TCSHHHHHHHHHHHHH
T ss_pred eeecCcHHHHHHHHHhCCCCceEEEEeccCCCCCCCHHHHHHHh--------------CcCHHHHHHHHHHHcc
Confidence 55787778888888776 33 3 4444433322333334433 3888999988888876
No 205
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=25.94 E-value=77 Score=24.98 Aligned_cols=44 Identities=5% Similarity=-0.028 Sum_probs=28.3
Q ss_pred CCCcEEEEecCCCccC--HHHHHHHHHHHHhCCCEEEEEeCCCChhh
Q 037721 8 ADQLHVVMFPWFAFGH--ISPFVQLSNKLSLHGVKVSFFSAPGNIPR 52 (465)
Q Consensus 8 ~~~~~il~~~~~~~GH--~~p~l~La~~L~~rGh~V~~~~~~~~~~~ 52 (465)
+++.-+++ ..+-+|+ ..-.+.+|..+.+.||+|.++-.....-.
T Consensus 5 Mkk~~ivv-~~~P~g~~~~~~al~~a~a~~a~~~~v~Vff~~DGV~~ 50 (136)
T 2hy5_B 5 VKKFMYLN-RKAPYGTIYAWEALEVVLIGAAFDQDVCVLFLDDGVYQ 50 (136)
T ss_dssp CCEEEEEE-CSCTTTSSHHHHHHHHHHHHGGGCCEEEEEECGGGGGG
T ss_pred hhEEEEEE-eCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEEhHHHHH
Confidence 33333344 3333554 44568889999999999999877654433
No 206
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=25.93 E-value=67 Score=26.96 Aligned_cols=37 Identities=22% Similarity=0.446 Sum_probs=27.9
Q ss_pred cEEEEecCCCc--c-CHHHHHHHHHHHHhCCCEEEEEeCC
Q 037721 11 LHVVMFPWFAF--G-HISPFVQLSNKLSLHGVKVSFFSAP 47 (465)
Q Consensus 11 ~~il~~~~~~~--G-H~~p~l~La~~L~~rGh~V~~~~~~ 47 (465)
.+|+++|.=+. . -..+.-.|++.|.++|.+|.|..++
T Consensus 47 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 86 (203)
T 2fsv_C 47 SKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHP 86 (203)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CcEEEEcCchHhHHHHHHHHHHHHHHHHHcCCeEEEEecc
Confidence 46777765211 1 2358899999999999999999877
No 207
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=25.90 E-value=3e+02 Score=25.04 Aligned_cols=114 Identities=7% Similarity=0.032 Sum_probs=68.3
Q ss_pred HHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhhhhhcCCCceEEecccchHhhhccccceeecccCChhhHHHHHH
Q 037721 290 ELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRHESVGCYVCHSGFSSVTEAVI 369 (465)
Q Consensus 290 ~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~~~~~~~ItHgG~~s~~Eal~ 369 (465)
.+++.++..+..++++.+.. ..+|+.+.+..+...+-+ |+++ .=-.-|...+..|+.
T Consensus 72 ~~~~~l~~~~~Dliv~~~y~----------~ilp~~il~~~~~g~iNi-----------HpSL--LP~yRG~~pi~~Ai~ 128 (314)
T 1fmt_A 72 ENQQLVAELQADVMVVVAYG----------LILPKAVLEMPRLGCINV-----------HGSL--LPRWRGAAPIQRSLW 128 (314)
T ss_dssp HHHHHHHHTTCSEEEEESCC----------SCCCHHHHHSSTTCEEEE-----------ESSS--TTTTBSSCHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEeecc----------ccCCHHHHhhccCCEEEE-----------cCCc--CcCCCCcCHHHHHHH
Confidence 35566777788888888753 467777765433333333 4444 444568899999999
Q ss_pred hCCceeecccc--ccchhhHHHHhhhhcceEEeeecCCCCccCHHHHHHHHHHhhcccCCcchHHHHHHHHHHH
Q 037721 370 SDCQLVLLPLK--GDQFLNSKLVAGDLKAGVEVNRRDHDGHFGKEDIFKAVKTVMVDVNKEPGASIRANQKWWR 441 (465)
Q Consensus 370 ~GvP~l~~P~~--~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~a~~l~ 441 (465)
+|....++=++ .+..+.+..+.+. -+.+.. .-|.++|.+.+..+= -.-+.+....+.
T Consensus 129 ~G~~~tGvTih~~~~~~D~G~Ii~q~---~~~I~~-----~dt~~~L~~rl~~~~-------~~ll~~~l~~l~ 187 (314)
T 1fmt_A 129 AGDAETGVTIMQMDVGLDTGDMLYKL---SCPITA-----EDTSGTLYDKLAELG-------PQGLITTLKQLA 187 (314)
T ss_dssp HTCSEEEEEEEECCSSSSCSCEEEEE---EEECCT-----TCCHHHHHHHHHHHH-------HHHHHHHHHHHH
T ss_pred cCCCceEEEEEEEcccCcCCCEEEEE---EEecCC-----CCCHHHHHHHHHHHH-------HHHHHHHHHHHH
Confidence 99998776643 3444444444433 122222 258888888775433 244555555443
No 208
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=25.71 E-value=47 Score=31.22 Aligned_cols=29 Identities=31% Similarity=0.426 Sum_probs=23.6
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEE
Q 037721 11 LHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFF 44 (465)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~ 44 (465)
+||+|+-.+--| +.+|..|+++|++|+++
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEE
Confidence 588888666333 78899999999999997
No 209
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=25.58 E-value=97 Score=25.24 Aligned_cols=28 Identities=18% Similarity=0.280 Sum_probs=23.8
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHHhcC
Q 037721 272 VIYCSFGSETFLTVDQIKELAIGLEITG 299 (465)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~i~~al~~~~ 299 (465)
.+|+++||......+.+...+.+|+..+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (159)
T 2qx0_A 3 RVYIALGSNLAMPLQQVSAAREALAHLP 30 (159)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHTCT
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcCC
Confidence 5899999998788889999999988653
No 210
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=25.39 E-value=76 Score=25.86 Aligned_cols=27 Identities=22% Similarity=0.266 Sum_probs=22.2
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHHhc
Q 037721 272 VIYCSFGSETFLTVDQIKELAIGLEIT 298 (465)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~i~~al~~~ 298 (465)
.+|+++||........+...+.+|+..
T Consensus 2 ~~~i~LGSNlGd~~~~l~~A~~~L~~~ 28 (158)
T 1f9y_A 2 VAYIAIGSNLASPLEQVNAALKALGDI 28 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTS
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcC
Confidence 689999998766678888888888765
No 211
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=25.36 E-value=69 Score=26.96 Aligned_cols=37 Identities=24% Similarity=0.401 Sum_probs=27.9
Q ss_pred cEEEEecCCCc--c-CHHHHHHHHHHHHhCCCEEEEEeCC
Q 037721 11 LHVVMFPWFAF--G-HISPFVQLSNKLSLHGVKVSFFSAP 47 (465)
Q Consensus 11 ~~il~~~~~~~--G-H~~p~l~La~~L~~rGh~V~~~~~~ 47 (465)
.+|+++|.=+. . -..+.-.|++.|.++|.+|.|..++
T Consensus 46 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 85 (207)
T 1djl_A 46 NSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHP 85 (207)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CeEEEECCchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCc
Confidence 46777765211 1 2368899999999999999999877
No 212
>3he5_B Synzip2; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=24.92 E-value=1e+02 Score=18.53 Aligned_cols=7 Identities=14% Similarity=0.187 Sum_probs=2.6
Q ss_pred HHHHHHh
Q 037721 415 FKAVKTV 421 (465)
Q Consensus 415 ~~ai~~l 421 (465)
++.|.++
T Consensus 9 rkkiarl 15 (52)
T 3he5_B 9 RKKIARL 15 (52)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3333333
No 213
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=24.69 E-value=1e+02 Score=23.80 Aligned_cols=32 Identities=9% Similarity=0.060 Sum_probs=24.9
Q ss_pred cCHHHHHHHHHHHHhCCCEE-EEEeCCCChhhh
Q 037721 22 GHISPFVQLSNKLSLHGVKV-SFFSAPGNIPRI 53 (465)
Q Consensus 22 GH~~p~l~La~~L~~rGh~V-~~~~~~~~~~~i 53 (465)
-.....+.+|.++.+.||+| .++-..+.....
T Consensus 15 ~~~~~al~~a~a~~~~g~~v~~vff~~dGV~~~ 47 (130)
T 2hy5_A 15 QASDSAYQFAKAALEKGHEIFRVFFYHDGVNNS 47 (130)
T ss_dssp THHHHHHHHHHHHHHTTCEEEEEEECGGGGGGG
T ss_pred HHHHHHHHHHHHHHhcCCeeCEEEEechHHHHH
Confidence 44678899999999999999 888776554433
No 214
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=24.59 E-value=93 Score=30.14 Aligned_cols=42 Identities=17% Similarity=0.189 Sum_probs=35.3
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCChh
Q 037721 10 QLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIP 51 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~~ 51 (465)
+..|+++..++.|-..-+..||..|+++|++|.++..+.++.
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~ 141 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRP 141 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSST
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcch
Confidence 344566667799999999999999999999999999876654
No 215
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=24.45 E-value=76 Score=27.60 Aligned_cols=32 Identities=13% Similarity=0.060 Sum_probs=27.7
Q ss_pred cCCCccCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 037721 17 PWFAFGHISPFVQLSNKLSLHGVKVSFFSAPG 48 (465)
Q Consensus 17 ~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~ 48 (465)
+-++-|-..-...||..|+++|++|.++=.+.
T Consensus 10 ~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 10 GKGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp SSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 33689999999999999999999999986554
No 216
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=24.36 E-value=1.4e+02 Score=22.24 Aligned_cols=34 Identities=21% Similarity=0.352 Sum_probs=28.5
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHHhcCCCeEEEEcCC
Q 037721 272 VIYCSFGSETFLTVDQIKELAIGLEITGLPFFLVLNFP 309 (465)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~i~~al~~~~~~~i~~~~~~ 309 (465)
.|||-|.| +++.++.|...++..|++++..++..
T Consensus 3 qifvvfss----dpeilkeivreikrqgvrvvllysdq 36 (162)
T 2l82_A 3 QIFVVFSS----DPEILKEIVREIKRQGVRVVLLYSDQ 36 (162)
T ss_dssp EEEEEEES----CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred eEEEEecC----CHHHHHHHHHHHHhCCeEEEEEecCc
Confidence 57777744 78999999999999999999988764
No 217
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=24.32 E-value=61 Score=26.95 Aligned_cols=87 Identities=9% Similarity=0.026 Sum_probs=59.2
Q ss_pred cCHHHHHHHHHHHHhC--CCEEEEEeCCCChhhhhc-ccCCCCCeeEEEccCCCCCCCCCCCCCCCCCchHHHHHHHHHH
Q 037721 22 GHISPFVQLSNKLSLH--GVKVSFFSAPGNIPRIKS-SLNLTPMADIIPLQIPHVDGLPPGLDSTSEMTPHMAELLKQAL 98 (465)
Q Consensus 22 GH~~p~l~La~~L~~r--Gh~V~~~~~~~~~~~i~~-~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (465)
.+=.-++.+|+.|.+. ||++ +.+......+++ .| +.+..+. ..+.+
T Consensus 37 ~dK~~lv~~ak~~~~lL~Gf~L--~AT~gTa~~L~e~~G-----l~v~~v~-----k~~eG------------------- 85 (178)
T 1vmd_A 37 RRKRDLLEWVSFNLGTLSKHEL--YATGTTGALLQEKLG-----LKVHRLK-----SGPLG------------------- 85 (178)
T ss_dssp GGHHHHHHHHHHSHHHHTTSEE--EECHHHHHHHHHHHC-----CCCEECS-----CGGGT-------------------
T ss_pred hhHHHHHHHHHHHHHHhcCCEE--EEchHHHHHHHHHhC-----ceeEEEe-----ecCCC-------------------
Confidence 3446789999999998 9954 467777778877 77 6665553 11111
Q ss_pred HhhHHHHHHHHhhcCCcEEEEcCC--Cccc--------ccccccccCCeeEEEe
Q 037721 99 DLMQPQIKTLLSQLKPHFVFFDFT--HYWL--------PGLVGSQLGIKTVNFS 142 (465)
Q Consensus 99 ~~~~~~l~~~l~~~~pD~vi~D~~--~~~~--------~~~~A~~~giP~v~~~ 142 (465)
-.+.+.++|++.+.|+||.-.- ..-. ..+ |-..+||++...
T Consensus 86 --G~pqI~d~I~~geIdlVInt~dPl~~~~h~~D~~~IRR~-A~~~~IP~~Tnl 136 (178)
T 1vmd_A 86 --GDQQIGAMIAEGKIDVLIFFWDPLEPQAHDVDVKALIRI-ATVYNIPVAITR 136 (178)
T ss_dssp --HHHHHHHHHHTTSCCEEEEECCSSSCCTTSCCHHHHHHH-HHHTTCCEESSH
T ss_pred --CCchHHHHHHCCCccEEEEccCccCCCcccccHHHHHHH-HHHcCCCEEeCH
Confidence 1256788899999999997542 2111 246 889999988643
No 218
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=24.29 E-value=47 Score=31.00 Aligned_cols=37 Identities=11% Similarity=0.034 Sum_probs=27.3
Q ss_pred CCCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 037721 6 AEADQLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAP 47 (465)
Q Consensus 6 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~ 47 (465)
+.....+|+++-.+.. -+..|..|+++|++|+++-..
T Consensus 13 ~~~~~~dvvIIGgG~~-----Gl~~A~~La~~G~~V~llE~~ 49 (382)
T 1ryi_A 13 AMKRHYEAVVIGGGII-----GSAIAYYLAKENKNTALFESG 49 (382)
T ss_dssp -CCSEEEEEEECCSHH-----HHHHHHHHHHTTCCEEEECSS
T ss_pred ccCCCCCEEEECcCHH-----HHHHHHHHHhCCCcEEEEeCC
Confidence 3344678888876633 477888999999999998654
No 219
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=24.25 E-value=1.3e+02 Score=25.93 Aligned_cols=46 Identities=17% Similarity=0.020 Sum_probs=30.8
Q ss_pred hhhhccccCCCCCCeEEEEEeCCcccCCHHHHHHHHHHHHhcCCCeEE
Q 037721 257 EERWAKWLCKYPPKSVIYCSFGSETFLTVDQIKELAIGLEITGLPFFL 304 (465)
Q Consensus 257 ~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~i~~al~~~~~~~i~ 304 (465)
.+.+.+|+.. .+.+++|..|+........+..+.+++++.|+.+..
T Consensus 21 ~~~l~~~~~~--~~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~~~~ 66 (229)
T 1fy2_A 21 LPLIANQLNG--RRSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNVTG 66 (229)
T ss_dssp HHHHHHHHTT--CCEEEEECTTCCSSCHHHHHHHHHHHHGGGTCEEEE
T ss_pred HHHHHHHhcC--CCeEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEE
Confidence 3445556652 355999999875433446777788999988876543
No 220
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=24.18 E-value=1.1e+02 Score=26.58 Aligned_cols=31 Identities=26% Similarity=0.217 Sum_probs=21.1
Q ss_pred CCcEEE-EcCCC-cccccccccccCCeeEEEecc
Q 037721 113 KPHFVF-FDFTH-YWLPGLVGSQLGIKTVNFSVF 144 (465)
Q Consensus 113 ~pD~vi-~D~~~-~~~~~~~A~~~giP~v~~~~~ 144 (465)
.||+|| .|... .-+..= |..+|||+|.+..+
T Consensus 157 ~Pdll~v~Dp~~e~~ai~E-A~~l~IPvIaivDT 189 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALRE-CITLGIPTICLIDT 189 (231)
T ss_dssp CCSEEEESCTTTTHHHHHH-HHTTTCCEEECCCS
T ss_pred CCCEEEEeCCccccHHHHH-HHHhCCCEEEEecC
Confidence 499865 56532 224566 78999999997643
No 221
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=24.06 E-value=1.1e+02 Score=22.51 Aligned_cols=47 Identities=6% Similarity=0.129 Sum_probs=34.5
Q ss_pred HhCCceeeccccccchhhHHHHhhhhcceEEeeecCCCCccCHHHHHHHHHHhhc
Q 037721 369 ISDCQLVLLPLKGDQFLNSKLVAGDLKAGVEVNRRDHDGHFGKEDIFKAVKTVMV 423 (465)
Q Consensus 369 ~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~ll~ 423 (465)
...+|+|++ ..++........+. |+--.+.+. ++.++|.++|++++.
T Consensus 78 ~~~~~ii~~--~~~~~~~~~~~~~~-g~~~~l~kp-----~~~~~l~~~i~~~~~ 124 (127)
T 2gkg_A 78 LKNVPIVII--GNPDGFAQHRKLKA-HADEYVAKP-----VDADQLVERAGALIG 124 (127)
T ss_dssp TTTSCEEEE--ECGGGHHHHHHSTT-CCSEEEESS-----CCHHHHHHHHHHHHC
T ss_pred ccCCCEEEE--ecCCchhHHHHHHh-CcchheeCC-----CCHHHHHHHHHHHHc
Confidence 357899998 44445555566666 876666664 899999999999876
No 222
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=23.92 E-value=3.8e+02 Score=24.06 Aligned_cols=54 Identities=7% Similarity=0.049 Sum_probs=28.8
Q ss_pred HHhCCceeeccccccc----------------hhhHHHHhhhhcc-eEEeeec--------CCCCccCHHHHHHHHHHhh
Q 037721 368 VISDCQLVLLPLKGDQ----------------FLNSKLVAGDLKA-GVEVNRR--------DHDGHFGKEDIFKAVKTVM 422 (465)
Q Consensus 368 l~~GvP~l~~P~~~DQ----------------~~na~~v~~~~G~-G~~l~~~--------~~~~~~~~~~l~~ai~~ll 422 (465)
.++|+|++.-|-+.=| ..-+...... |+ |+.++.- |..-.++++++.+-++++.
T Consensus 192 ~~~~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~-GA~gl~IE~H~~pd~al~D~~~sl~p~el~~lv~~i~ 270 (285)
T 3sz8_A 192 TTGGCPVIFDVTHSLQCRDPLGDASGGRRRQVLDLARAGIAV-GIAGLFLEAHPDPDRARCDGPSALPLHQLEGLLSQMK 270 (285)
T ss_dssp HTTSCCEEEETTTTCC---------------HHHHHHHHHHH-CCSEEEEEEESCGGGCSCSSCCCEEGGGHHHHHHHHH
T ss_pred hCCCCCEEEeCCCccccCCCcCCCCCCchhhHHHHHHHHHHh-CCCEEEEEeccChhccCCchhhccCHHHHHHHHHHHH
Confidence 3447887776655421 2344555555 87 5666542 1123366666666665544
No 223
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=23.79 E-value=1.2e+02 Score=25.35 Aligned_cols=35 Identities=14% Similarity=0.021 Sum_probs=27.1
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 037721 11 LHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFS 45 (465)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~ 45 (465)
..++++..+..|...-...+++.|+++|+.|..+-
T Consensus 28 ~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d 62 (236)
T 1zi8_A 28 APVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPD 62 (236)
T ss_dssp EEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEecc
Confidence 34556666667777788899999999999887754
No 224
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=23.78 E-value=3.3e+02 Score=23.19 Aligned_cols=45 Identities=18% Similarity=0.181 Sum_probs=29.5
Q ss_pred eEEecccch-HhhhccccceeecccCChhhHHHHHH---------hCCceeeccc
Q 037721 335 VVHTGWVQQ-QLILRHESVGCYVCHSGFSSVTEAVI---------SDCQLVLLPL 379 (465)
Q Consensus 335 v~~~~~~pq-~~vL~~~~~~~~ItHgG~~s~~Eal~---------~GvP~l~~P~ 379 (465)
..+....+. ..++...+-..++--||.||+-|... +++|++.+-.
T Consensus 93 ~~~~~~f~~Rk~~~~~~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 93 VRAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp EEEESSHHHHHHHHHHTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred eeecCCHHHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 344455563 34444434445778899999988762 4899998764
No 225
>3qbc_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; protein-inhibitor complex, ferredoxin-like fold; HET: B55; 1.65A {Staphylococcus aureus}
Probab=23.76 E-value=90 Score=25.49 Aligned_cols=27 Identities=19% Similarity=0.069 Sum_probs=22.2
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHHhc
Q 037721 272 VIYCSFGSETFLTVDQIKELAIGLEIT 298 (465)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~i~~al~~~ 298 (465)
.+|+++||......+.+...+.+|...
T Consensus 6 ~v~i~LGSNlGd~~~~l~~A~~~L~~~ 32 (161)
T 3qbc_A 6 QAYLGLGSNIGDRESQLNDAIKILNEY 32 (161)
T ss_dssp EEEEEEEECSSSHHHHHHHHHHHHHHS
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcC
Confidence 799999998766678888888888764
No 226
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=23.60 E-value=1.7e+02 Score=23.99 Aligned_cols=42 Identities=5% Similarity=-0.007 Sum_probs=31.1
Q ss_pred CCCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 037721 6 AEADQLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPG 48 (465)
Q Consensus 6 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~ 48 (465)
.+++.++|+|+.+++.. ..-+....+.|.+.|++|++++...
T Consensus 5 ~~~~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 46 (190)
T 2vrn_A 5 KDLTGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLEP 46 (190)
T ss_dssp -CCTTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCCCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecCC
Confidence 34556789998887654 4456666788888999999998764
No 227
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=23.44 E-value=3.5e+02 Score=23.11 Aligned_cols=82 Identities=10% Similarity=0.081 Sum_probs=45.2
Q ss_pred ceEEecccch-Hhhh-ccccceeecccCChhhHHHHH---------HhCCceeeccc--cccchhh-HHHHhhhhcceE-
Q 037721 334 GVVHTGWVQQ-QLIL-RHESVGCYVCHSGFSSVTEAV---------ISDCQLVLLPL--KGDQFLN-SKLVAGDLKAGV- 398 (465)
Q Consensus 334 nv~~~~~~pq-~~vL-~~~~~~~~ItHgG~~s~~Eal---------~~GvP~l~~P~--~~DQ~~n-a~~v~~~~G~G~- 398 (465)
++.++...+. ..++ .+++ ..++--||.||+-|.. .+++|++.+-. ++|.... -+.+.+. |.=-
T Consensus 88 ~~~~~~~~~~Rk~~~~~~sd-a~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~gfw~~l~~~l~~~~~~-Gfi~~ 165 (216)
T 1ydh_A 88 DVRVVADMHERKAAMAQEAE-AFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEE-GFIKP 165 (216)
T ss_dssp EEEEESSHHHHHHHHHHHCS-EEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECGGGTTHHHHHHHHHHHHT-TSSCH
T ss_pred cccccCCHHHHHHHHHHhCC-EEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecCCccchHHHHHHHHHHHC-CCCCh
Confidence 3555555553 3333 3444 4567889999988876 47999999864 2332222 1333333 3200
Q ss_pred ----EeeecCCCCccCHHHHHHHHHHhh
Q 037721 399 ----EVNRRDHDGHFGKEDIFKAVKTVM 422 (465)
Q Consensus 399 ----~l~~~~~~~~~~~~~l~~ai~~ll 422 (465)
.+... -+++++.+.|.+..
T Consensus 166 ~~~~~~~~~-----d~~ee~~~~l~~~~ 188 (216)
T 1ydh_A 166 GARNIVVSA-----PTAKELMEKMEEYT 188 (216)
T ss_dssp HHHTTEEEE-----SSHHHHHHHHHHCC
T ss_pred HHcCeEEEe-----CCHHHHHHHHHHhc
Confidence 01112 37788888776543
No 228
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=23.25 E-value=72 Score=27.87 Aligned_cols=39 Identities=18% Similarity=0.193 Sum_probs=25.3
Q ss_pred CcEEEEecCCCccCH--HHHHHHHHHHHhCCCEEEEEeCCC
Q 037721 10 QLHVVMFPWFAFGHI--SPFVQLSNKLSLHGVKVSFFSAPG 48 (465)
Q Consensus 10 ~~~il~~~~~~~GH~--~p~l~La~~L~~rGh~V~~~~~~~ 48 (465)
+.-++++..++.+|- ..+..+|+.|+++|+.|..+-...
T Consensus 55 ~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~rG 95 (259)
T 4ao6_A 55 SDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGPG 95 (259)
T ss_dssp CSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCCC
T ss_pred CCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccCC
Confidence 445777778777774 357789999999999988876543
No 229
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=23.22 E-value=1.1e+02 Score=25.65 Aligned_cols=36 Identities=19% Similarity=0.158 Sum_probs=29.0
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 037721 11 LHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSA 46 (465)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~ 46 (465)
..++++..+..|+-.-...+++.|+++|+.|..+-.
T Consensus 32 ~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 32 LPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 456666677778888899999999999998887654
No 230
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=22.98 E-value=3.2e+02 Score=22.47 Aligned_cols=115 Identities=11% Similarity=0.067 Sum_probs=59.0
Q ss_pred CeEEEEEeCCcccCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCcccccccC-ChhhhhhcCCCceEE---ecccchHh
Q 037721 270 KSVIYCSFGSETFLTVDQIKELAIGLEITGLPFFLVLNFPPNVDGQSELVRTL-PPGFMDRVKDRGVVH---TGWVQQQL 345 (465)
Q Consensus 270 ~~~v~vs~GS~~~~~~~~~~~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~l-p~~~~~~~~~~nv~~---~~~~pq~~ 345 (465)
+.+++.-.||..... ...+++.|.+.|+++-++.... ....+ |+.+.. ..+ .++. ..|+++..
T Consensus 6 k~IllgvTGs~aa~k---~~~ll~~L~~~g~~V~vv~T~~--------A~~fi~~~~l~~-l~~-~v~~~~~~~~~~hi~ 72 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN---ISHYIIELKSKFDEVNVIASTN--------GRKFINGEILKQ-FCD-NYYDEFEDPFLNHVD 72 (175)
T ss_dssp CEEEEEECSSGGGGG---HHHHHHHHTTTCSEEEEEECTG--------GGGGSCHHHHHH-HCS-CEECTTTCTTCCHHH
T ss_pred CEEEEEEeCHHHHHH---HHHHHHHHHHCCCEEEEEECcC--------HHHHhhHHHHHH-hcC-CEEecCCCCcccccc
Confidence 446665566655432 3445666666677776555443 11111 222221 111 2221 13455666
Q ss_pred hhccccceeecccCChhhHH-------------HHHHhCCceeecccc----cc---chhhHHHHhhhhcceEE
Q 037721 346 ILRHESVGCYVCHSGFSSVT-------------EAVISDCQLVLLPLK----GD---QFLNSKLVAGDLKAGVE 399 (465)
Q Consensus 346 vL~~~~~~~~ItHgG~~s~~-------------Eal~~GvP~l~~P~~----~D---Q~~na~~v~~~~G~G~~ 399 (465)
+-..+++ ++|.=|-.||+. -++..++|+++.|-. ++ ...|..++.+. |+=+.
T Consensus 73 l~~~aD~-~vVaPaTanTlakiA~GiaDnLlt~~~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~~-G~~iv 144 (175)
T 3qjg_A 73 IANKHDK-IIILPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLLKDY-GVSIY 144 (175)
T ss_dssp HHHTCSE-EEEEEECHHHHHHHHTTCCCSHHHHHHHTCGGGEEEEECEEHHHHTCHHHHHHHHHHHHT-TCEEC
T ss_pred ccchhCE-EEEeeCCHHHHHHHHccccCCHHHHHHHHcCCCEEEEecCChhhhcCHHHHHHHHHHHHC-CCEEE
Confidence 5555554 345545444432 346779999999931 12 24567777776 87543
No 231
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=22.82 E-value=65 Score=26.50 Aligned_cols=37 Identities=24% Similarity=0.478 Sum_probs=28.0
Q ss_pred cEEEEecCCCc--c-CHHHHHHHHHHHHhCCCEEEEEeCC
Q 037721 11 LHVVMFPWFAF--G-HISPFVQLSNKLSLHGVKVSFFSAP 47 (465)
Q Consensus 11 ~~il~~~~~~~--G-H~~p~l~La~~L~~rGh~V~~~~~~ 47 (465)
.+|+++|.=+. . -..+.-.|++.|.++|.+|.|..++
T Consensus 31 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 70 (186)
T 2bru_C 31 HSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHP 70 (186)
T ss_dssp SEEEEECSBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECS
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 36777764211 1 2358999999999999999999887
No 232
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=22.56 E-value=52 Score=29.88 Aligned_cols=35 Identities=11% Similarity=0.043 Sum_probs=25.9
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 037721 8 ADQLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAP 47 (465)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~ 47 (465)
..+++|.|+-.+..| ..+|+.|++.||+|+++...
T Consensus 5 ~~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 5 GTDFHVGIVGLGSMG-----MGAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCCCeEEEECCCHHH-----HHHHHHHHHCCCeEEEEECC
Confidence 345689999766555 46899999999999988543
No 233
>1cbk_A Protein (7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase); transferase; HET: ROI; 2.02A {Haemophilus influenzae} SCOP: d.58.30.1
Probab=22.51 E-value=93 Score=25.39 Aligned_cols=27 Identities=19% Similarity=0.262 Sum_probs=22.2
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHHhc
Q 037721 272 VIYCSFGSETFLTVDQIKELAIGLEIT 298 (465)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~i~~al~~~ 298 (465)
.+|+++||......+.+...+.+|+..
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~ 29 (160)
T 1cbk_A 3 TAYIALGSNLNTPVEQLHAALKAISQL 29 (160)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTS
T ss_pred EEEEEEeccchHHHHHHHHHHHHHhhC
Confidence 589999998866678888888888764
No 234
>1ny5_A Transcriptional regulator (NTRC family); AAA+ ATPase, sigma54 activator, bacterial transcription, DIM transcription; HET: ADP; 2.40A {Aquifex aeolicus} SCOP: c.23.1.1 c.37.1.20 PDB: 1ny6_A* 3m0e_A* 1zy2_A*
Probab=22.41 E-value=4.2e+02 Score=24.70 Aligned_cols=82 Identities=9% Similarity=0.049 Sum_probs=49.8
Q ss_pred HhCCceeeccccccchhhHHHHhhhhcceEEeeecCCCCccCHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHHHc--
Q 037721 369 ISDCQLVLLPLKGDQFLNSKLVAGDLKAGVEVNRRDHDGHFGKEDIFKAVKTVMVDVNKEPGASIRANQKWWREFLLN-- 446 (465)
Q Consensus 369 ~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~a~~l~~~~~~-- 446 (465)
...+|+|++--..+ ...+...-+. |+--.+.+. ++.++|..+|++++. ....++....+......
T Consensus 70 ~~~~pvIvlT~~~~-~~~~~~a~~~-Ga~dyl~KP-----~~~~~L~~~i~~~l~------~~~l~~~~~~l~~~~~~~~ 136 (387)
T 1ny5_A 70 SPETEVIVITGHGT-IKTAVEAMKM-GAYDFLTKP-----CMLEEIELTINKAIE------HRKLRKENELLRREKDLKE 136 (387)
T ss_dssp CTTSEEEEEEETTC-HHHHHHHHTT-TCCEEEEES-----CCHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHTTC
T ss_pred CCCCcEEEEeCCCC-HHHHHHHHhc-CceEEecCC-----CCHHHHHHHHHHHHH------HHHHHHHHHHhhhhhhhcc
Confidence 34678888754443 4455666666 876677764 899999999999987 55555444444433221
Q ss_pred --CCchHHHHHHHHHHHHh
Q 037721 447 --GQIQDKFIADFVKDLKA 463 (465)
Q Consensus 447 --~~~~~~~~~~~~~~l~~ 463 (465)
--+.+..+.++.+.+++
T Consensus 137 ~~~ig~s~~m~~l~~~i~~ 155 (387)
T 1ny5_A 137 EEYVFESPKMKEILEKIKK 155 (387)
T ss_dssp CCCCCCSHHHHHHHHHHHH
T ss_pred hhhhhccHHhhHHHHHHHH
Confidence 12233455565555544
No 235
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=22.34 E-value=97 Score=28.32 Aligned_cols=34 Identities=9% Similarity=0.211 Sum_probs=27.0
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 037721 9 DQLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAP 47 (465)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~ 47 (465)
+.++|.|+-.+..| ..+|+.|++.||+|+++...
T Consensus 30 ~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 30 YARKITFLGTGSMG-----LPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp CCSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcCC
Confidence 45689999777766 56889999999999987543
No 236
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=22.21 E-value=1.6e+02 Score=24.63 Aligned_cols=60 Identities=5% Similarity=0.119 Sum_probs=35.9
Q ss_pred CcEE-EEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCCh---h--hhhcccCCCCCeeEEEcc
Q 037721 10 QLHV-VMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNI---P--RIKSSLNLTPMADIIPLQ 69 (465)
Q Consensus 10 ~~~i-l~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~~---~--~i~~~g~~~~~~~~~~l~ 69 (465)
+.|| +|+..+...+-.....+++.|++.|++|.++...... + .+.+.+...++-.+..+|
T Consensus 106 ~~riiil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~G~~~~~~~l~~la~~~n~~~~s~~~~~~ 171 (192)
T 2x5n_A 106 RQRIVAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIGELQNESALQHFIDAANSSDSCHLVSIP 171 (192)
T ss_dssp EEEEEEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEESCC---CHHHHHHHHHCSTTCCEEEEEC
T ss_pred CceEEEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEeCCCCccHHHHHHHHhccCCCceEEEEec
Confidence 3344 4555555556777889999999999998887644321 1 122221222456677776
No 237
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=22.08 E-value=55 Score=25.47 Aligned_cols=32 Identities=19% Similarity=0.112 Sum_probs=24.1
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 037721 11 LHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAP 47 (465)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~ 47 (465)
.||+++-. |.+ -..+++.|.++||+|+++...
T Consensus 7 ~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 7 YEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECC
Confidence 46777755 433 457899999999999988754
No 238
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=22.03 E-value=3.8e+02 Score=24.33 Aligned_cols=101 Identities=11% Similarity=0.134 Sum_probs=62.6
Q ss_pred HHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhhhhhcCCCceEEecccchHhhhccccceeecccCChhhHHHHHH
Q 037721 290 ELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRHESVGCYVCHSGFSSVTEAVI 369 (465)
Q Consensus 290 ~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~~~~~~~ItHgG~~s~~Eal~ 369 (465)
++++.++..+..++++.+.. ..+|+.+.+..+...+-+ |+++ .=-+-|...+..|+.
T Consensus 71 ~~~~~l~~~~~Dliv~~~~~----------~ilp~~il~~~~~g~iNi-----------HpSl--LP~yRG~~pi~~Ai~ 127 (314)
T 3tqq_A 71 VEQEKLIAMNADVMVVVAYG----------LILPKKALNAFRLGCVNV-----------HASL--LPRWRGAAPIQRAIL 127 (314)
T ss_dssp HHHHHHHTTCCSEEEEESCC----------SCCCHHHHTSSTTCEEEE-----------ESSC--TTTTBSSCHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEcCcc----------cccCHHHHhhCcCCEEEe-----------cCcc--ccCCCCccHHHHHHH
Confidence 45677777888999888753 467777765433332323 4554 445668899999999
Q ss_pred hCCceeecccc--ccchhhHHHHhhhhcceEEeeecCCCCccCHHHHHHHHHHh
Q 037721 370 SDCQLVLLPLK--GDQFLNSKLVAGDLKAGVEVNRRDHDGHFGKEDIFKAVKTV 421 (465)
Q Consensus 370 ~GvP~l~~P~~--~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~l 421 (465)
+|.....+=++ .+..+.+..+.+. -+.+.. .-|.++|.+.+..+
T Consensus 128 ~G~~~tGvTih~~~~~~D~G~Ii~q~---~~~I~~-----~dt~~~L~~rl~~~ 173 (314)
T 3tqq_A 128 AGDRETGISIMQMNEGLDTGDVLAKS---ACVISS-----EDTAADLHDRLSLI 173 (314)
T ss_dssp HTCSEEEEEEEECCSSSSCSCEEEEE---EEECCT-----TCCHHHHHHHHHHH
T ss_pred cCCCeeEEEEEeeecCCCCCCEEEEE---EEeeCC-----CCCHHHHHHHHHHH
Confidence 99998776643 3444444444433 122222 24788887776543
No 239
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=21.67 E-value=47 Score=31.59 Aligned_cols=35 Identities=17% Similarity=0.259 Sum_probs=26.4
Q ss_pred hHhhhccccceeecccCChhhHHHHHHh----CC-ceeeccc
Q 037721 343 QQLILRHESVGCYVCHSGFSSVTEAVIS----DC-QLVLLPL 379 (465)
Q Consensus 343 q~~vL~~~~~~~~ItHgG~~s~~Eal~~----Gv-P~l~~P~ 379 (465)
..++-..+++ +|+=||-||++.|+.. ++ |+|.+..
T Consensus 108 ~~~~~~~~Dl--VIvlGGDGTlL~aa~~~~~~~vpPiLGIN~ 147 (388)
T 3afo_A 108 EQDIVNRTDL--LVTLGGDGTILHGVSMFGNTQVPPVLAFAL 147 (388)
T ss_dssp HHHHHHHCSE--EEEEESHHHHHHHHHTTTTSCCCCEEEEEC
T ss_pred hhhcccCCCE--EEEEeCcHHHHHHHHHhcccCCCeEEEEEC
Confidence 3444456677 9999999999999654 67 7888763
No 240
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=21.58 E-value=3.3e+02 Score=24.88 Aligned_cols=101 Identities=10% Similarity=0.105 Sum_probs=62.2
Q ss_pred HHHHHHHhcCCCeEEEEcCCCCCCCcccccccCChhhhhhcCCCceEEecccchHhhhccccceeecccCChhhHHHHHH
Q 037721 290 ELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRHESVGCYVCHSGFSSVTEAVI 369 (465)
Q Consensus 290 ~i~~al~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~pq~~vL~~~~~~~~ItHgG~~s~~Eal~ 369 (465)
++++.++..+..++++.+. ...+|+.+.+..+...+-+ |+++ .=-+-|...+..|+.
T Consensus 76 ~~~~~l~~~~~Dliv~~~y----------~~ilp~~~l~~~~~g~iNi-----------HpSl--LP~yRG~~pi~~Ai~ 132 (318)
T 3q0i_A 76 ESKQQLAALNADLMVVVAY----------GLLLPKVVLDTPKLGCINV-----------HGSI--LPRWRGAAPIQRSIW 132 (318)
T ss_dssp HHHHHHHTTCCSEEEESSC----------CSCCCHHHHTSSTTCEEEE-----------ESSS--TTTTBSSCHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEeCc----------cccCCHHHHhhCcCCEEEe-----------CCcc--CcCCCCcCHHHHHHH
Confidence 4667777788888888765 3467777765433332323 4554 445668899999999
Q ss_pred hCCceeecccc--ccchhhHHHHhhhhcceEEeeecCCCCccCHHHHHHHHHHh
Q 037721 370 SDCQLVLLPLK--GDQFLNSKLVAGDLKAGVEVNRRDHDGHFGKEDIFKAVKTV 421 (465)
Q Consensus 370 ~GvP~l~~P~~--~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~l~~ai~~l 421 (465)
+|....++=++ .+..+.+..+.+. -+.+.. .-|.++|.+.+..+
T Consensus 133 ~G~~~tGvTih~~~~~~D~G~Ii~q~---~~~I~~-----~dt~~~L~~rl~~~ 178 (318)
T 3q0i_A 133 AGDSETGVTIMQMDVGLDTGDMLKIA---TLPIEA-----SDTSASMYDKLAEL 178 (318)
T ss_dssp HTCSEEEEEEEECCSSSSCSCEEEEE---EEECCT-----TCCHHHHHHHHHHH
T ss_pred cCCCeEEEEEEEEcCCCCCCCEEEEE---EEeeCC-----CCCHHHHHHHHHHH
Confidence 99998776643 2444444433333 122222 24778887776543
No 241
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=21.53 E-value=1.1e+02 Score=27.58 Aligned_cols=39 Identities=21% Similarity=0.258 Sum_probs=29.4
Q ss_pred CCCcEEEEecCCCccCHHHH--HHHHHHHHhCC-CEEEEEeCC
Q 037721 8 ADQLHVVMFPWFAFGHISPF--VQLSNKLSLHG-VKVSFFSAP 47 (465)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~--l~La~~L~~rG-h~V~~~~~~ 47 (465)
.+++|||+++.. .+|-.+. -.|++.|.+.| ++|++....
T Consensus 2 ~~~~kvLiv~G~-~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 2 RKPIKTLLITGQ-NNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCCEEEEEEESC-CSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CCceEEEEEcCC-CCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 357899999544 4886444 46788888888 999999764
No 242
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=21.33 E-value=61 Score=28.96 Aligned_cols=40 Identities=13% Similarity=0.090 Sum_probs=30.2
Q ss_pred HHHHHHHhhcCCcEEEEcCCCcc------cccccccccCCeeEEEec
Q 037721 103 PQIKTLLSQLKPHFVFFDFTHYW------LPGLVGSQLGIKTVNFSV 143 (465)
Q Consensus 103 ~~l~~~l~~~~pD~vi~D~~~~~------~~~~~A~~~giP~v~~~~ 143 (465)
..|.+++++.+||+||+...+.. +..+ |..+|+|.+....
T Consensus 102 ~~La~~i~~~~~dlVl~G~~s~d~~~~~v~p~l-A~~L~~~~vt~v~ 147 (264)
T 1o97_C 102 RILTEVIKKEAPDMVFAGVQSSDQAYASTGISV-ASYLNWPHAAVVA 147 (264)
T ss_dssp HHHHHHHHHHCCSEEEEESCCTTTCCCCHHHHH-HHHHTCCEEEEEE
T ss_pred HHHHHHHHhcCCCEEEEcCCccCCchhhHHHHH-HHHhCCCcccceE
Confidence 55667777778999998775532 4567 9999999997654
No 243
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=21.30 E-value=1.3e+02 Score=25.65 Aligned_cols=37 Identities=11% Similarity=0.040 Sum_probs=25.9
Q ss_pred cEEEEecCCCccC--HHHHHHHHHHHHhCCCEEEEEeCC
Q 037721 11 LHVVMFPWFAFGH--ISPFVQLSNKLSLHGVKVSFFSAP 47 (465)
Q Consensus 11 ~~il~~~~~~~GH--~~p~l~La~~L~~rGh~V~~~~~~ 47 (465)
..++++..+..|+ ..-...+++.|.++|+.|..+-..
T Consensus 46 ~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 84 (270)
T 3pfb_A 46 YDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFN 84 (270)
T ss_dssp EEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCT
T ss_pred CCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccc
Confidence 3445555555555 566889999999999998876543
No 244
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=21.19 E-value=1.2e+02 Score=22.59 Aligned_cols=34 Identities=0% Similarity=0.055 Sum_probs=26.1
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEE
Q 037721 10 QLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSF 43 (465)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~ 43 (465)
.++|+++|..|.|+-.-.-.+-+.+.++|.++.+
T Consensus 4 ~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i 37 (109)
T 2l2q_A 4 SMNILLVCGAGMSTSMLVQRIEKYAKSKNINATI 37 (109)
T ss_dssp CEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEE
T ss_pred ceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEE
Confidence 4689999999999985555667777788886554
No 245
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=20.97 E-value=91 Score=28.54 Aligned_cols=69 Identities=12% Similarity=0.067 Sum_probs=37.2
Q ss_pred hCCCCeEeeccCCCCCCCCCcchhhhccccCCCCCCeEEEEEeCCc---ccCCHHHHHHHHHHHHhcCCCeEEEEcC
Q 037721 235 QFKKPVLLTGPLVNPEPPSGELEERWAKWLCKYPPKSVIYCSFGSE---TFLTVDQIKELAIGLEITGLPFFLVLNF 308 (465)
Q Consensus 235 ~~~~~~~~vGp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~---~~~~~~~~~~i~~al~~~~~~~i~~~~~ 308 (465)
..|.++..+|.+ .+... ....+++..+++..+-+.+- +|+. ...+.+.+..+.+.++..+..+++-.+.
T Consensus 106 ~~p~r~~~~~~l-~~~~~-~~a~~el~~~~~~~g~~Gv~---l~~~~~~~~l~d~~~~~~~~~~~e~~lpv~iH~~~ 177 (336)
T 2wm1_A 106 SYPRRFVGLGTL-PMQAP-ELAVKEMERCVKELGFPGVQ---IGTHVNEWDLNAQELFPVYAAAERLKCSLFVHPWD 177 (336)
T ss_dssp HSTTTEEEEECC-CTTSH-HHHHHHHHHHHHTSCCSEEE---EESEETTEETTCGGGHHHHHHHHHHTCEEEEECCS
T ss_pred hccCceeEEEeC-CCcCH-HHHHHHHHHHHHccCCeEEE---ECCcCCCCCCCCccHHHHHHHHHHcCCEEEECCCC
Confidence 345567777656 43321 11234455555332323332 2332 2244567888999998889887766543
No 246
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=20.93 E-value=1.8e+02 Score=21.88 Aligned_cols=38 Identities=8% Similarity=0.051 Sum_probs=29.7
Q ss_pred CCCcEEEEecCCCccCHHH-HHHHHHHHHhCCCEEEEEe
Q 037721 8 ADQLHVVMFPWFAFGHISP-FVQLSNKLSLHGVKVSFFS 45 (465)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p-~l~La~~L~~rGh~V~~~~ 45 (465)
.++++|+++|..|.|.-.- .-.|-+.+.++|.++.+-.
T Consensus 19 ~~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~ 57 (113)
T 1tvm_A 19 GSKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQ 57 (113)
T ss_dssp CSSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ccccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 3457899999999999884 6777788888998764443
No 247
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=20.80 E-value=79 Score=28.78 Aligned_cols=33 Identities=9% Similarity=0.150 Sum_probs=26.6
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCCCC
Q 037721 11 LHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGN 49 (465)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~~~ 49 (465)
++|+++..+ -...+++++.++||+|.++.....
T Consensus 3 m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~~ 35 (334)
T 2r85_A 3 VRIATYASH------SALQILKGAKDEGFETIAFGSSKV 35 (334)
T ss_dssp SEEEEESST------THHHHHHHHHHTTCCEEEESCGGG
T ss_pred eEEEEECCh------hHHHHHHHHHhCCCEEEEEECCCC
Confidence 578888776 467889999999999998876643
No 248
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=20.58 E-value=36 Score=26.94 Aligned_cols=97 Identities=11% Similarity=0.035 Sum_probs=62.9
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCCChhhhhc-ccCCCCCeeEEEccCCCCCCCCCCCCCCCCCc
Q 037721 11 LHVVMFPWFAFGHISPFVQLSNKLSLH--GVKVSFFSAPGNIPRIKS-SLNLTPMADIIPLQIPHVDGLPPGLDSTSEMT 87 (465)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~V~~~~~~~~~~~i~~-~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 87 (465)
++|+++..- .+=.-++.+|+.|.+. ||++ +.+......+++ .| +.+..+. ..+.+
T Consensus 4 ~~ialsv~D--~dK~~~v~~a~~~~~ll~Gf~l--~AT~gTa~~L~e~~G-----l~v~~v~-----k~~~e-------- 61 (134)
T 2xw6_A 4 RALALIAHD--AKKEEMVAFCQRHREVLARFPL--VATGTTGRRIEEATG-----LTVEKLL-----SGPLG-------- 61 (134)
T ss_dssp CEEEEEECG--GGHHHHHHHHHHTHHHHTTSCE--EECHHHHHHHHHHHC-----CCCEECS-----CGGGT--------
T ss_pred cEEEEEEec--ccHHHHHHHHHHHHHHhCCCEE--EEccHHHHHHHHhhC-----ceEEEEE-----ecCCC--------
Confidence 355555432 3346688999999998 9954 567777778877 77 6665553 11100
Q ss_pred hHHHHHHHHHHHhhHHHHHHHHhhcCCcEEEEcCC--Ccc--------cccccccccCCeeEEEec
Q 037721 88 PHMAELLKQALDLMQPQIKTLLSQLKPHFVFFDFT--HYW--------LPGLVGSQLGIKTVNFSV 143 (465)
Q Consensus 88 ~~~~~~~~~~~~~~~~~l~~~l~~~~pD~vi~D~~--~~~--------~~~~~A~~~giP~v~~~~ 143 (465)
-.+.+.+.|++.+.|+||.-.- ..- -... |...+||++....
T Consensus 62 -------------G~p~I~d~I~~geIdlVInt~~pl~~~~h~~D~~~IrR~-A~~~~IP~~T~la 113 (134)
T 2xw6_A 62 -------------GDQQMGARVAEGRILAVIFFRDPLTAQPHEPDVQALLRV-CDVHGVPLATNPM 113 (134)
T ss_dssp -------------HHHHHHHHHHTTCEEEEEEECCTTTCCTTSCCSHHHHHH-HHHHTCCEECSHH
T ss_pred -------------CcchHHHHHHCCCccEEEEccCcccCCCccchHHHHHHH-HHHcCCCeEcCHH
Confidence 2256788899999999997442 111 1246 7889999886443
No 249
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=20.31 E-value=70 Score=27.92 Aligned_cols=34 Identities=26% Similarity=0.271 Sum_probs=28.4
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 037721 9 DQLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAP 47 (465)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~V~~~~~~ 47 (465)
.+++|.|+-.|..|- .||+.|+++||+|+.+...
T Consensus 5 ~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSSG
T ss_pred CCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecCH
Confidence 457899999998885 5899999999999987653
No 250
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=20.23 E-value=3.8e+02 Score=22.33 Aligned_cols=119 Identities=11% Similarity=0.044 Sum_probs=0.0
Q ss_pred CCCCeEEEEEeCCcccCCH---HHHHHHHHHHHhcCCCeEEEEcC----------------CCCCCCcccccccCChhhh
Q 037721 267 YPPKSVIYCSFGSETFLTV---DQIKELAIGLEITGLPFFLVLNF----------------PPNVDGQSELVRTLPPGFM 327 (465)
Q Consensus 267 ~~~~~~v~vs~GS~~~~~~---~~~~~i~~al~~~~~~~i~~~~~----------------~~~~~~~~~~~~~lp~~~~ 327 (465)
..++..|-|-.||. ..++ +...++.+.|+..++.+|.=-+. . .-..+|..+.
T Consensus 10 ~~~~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv~GGG~~GlM~a~~~ga~~~GG~--------viGv~p~~l~ 80 (189)
T 3sbx_A 10 EPGRWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLVWGGGHVSAMGAVSSAARAHGGW--------TVGVIPKMLV 80 (189)
T ss_dssp ---CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCBCSHHHHHHHHHHHTTTCC--------EEEEEETTTT
T ss_pred CCCCeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEEECCCccCHHHHHHHHHHHcCCc--------EEEEcCchhh
Q ss_pred hhcCC-----CceEEecccchHhhhccccceeecccCChhhHHHHHHh---------CCceeec---cccccchhhHHHH
Q 037721 328 DRVKD-----RGVVHTGWVQQQLILRHESVGCYVCHSGFSSVTEAVIS---------DCQLVLL---PLKGDQFLNSKLV 390 (465)
Q Consensus 328 ~~~~~-----~nv~~~~~~pq~~vL~~~~~~~~ItHgG~~s~~Eal~~---------GvP~l~~---P~~~DQ~~na~~v 390 (465)
++... ..+.+..+.-...+|-..+-..++--||.||+-|.... ++|++.+ .+|.+=..+-+.+
T Consensus 81 ~~e~~~~~~~~~i~~~~~~~Rk~~m~~~sda~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln~~gfw~~l~~~l~~~ 160 (189)
T 3sbx_A 81 HRELADHDADELVVTETMWERKQVMEDRANAFITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLDPWGHFDGLRAWLSEL 160 (189)
T ss_dssp TTTTBCTTCSEEEEESSHHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECTTCTTHHHHHHHHHH
T ss_pred hcccCCCCCCeeEEcCCHHHHHHHHHHHCCEEEEeCCCcchHHHHHHHHHHHHhcccCCCEEEecCCccchHHHHHHHHH
Q ss_pred hhhhc
Q 037721 391 AGDLK 395 (465)
Q Consensus 391 ~~~~G 395 (465)
.+. |
T Consensus 161 ~~~-G 164 (189)
T 3sbx_A 161 ADT-G 164 (189)
T ss_dssp HHT-T
T ss_pred HHC-C
Done!