BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037727
(205 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1VJI|A Chain A, Gene Product Of At1g76680 From Arabidopsis Thaliana
pdb|2Q3R|A Chain A, Ensemble Refinement Of The Protein Crystal Structure Of
At1g76680 From Arabidopsis Thaliana
Length = 372
Score = 233 bits (594), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 112/156 (71%), Positives = 126/156 (80%), Gaps = 1/156 (0%)
Query: 23 IPLLTPYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEGGFLISEASVVSE 82
+PLLTPYKMG FNLSHR+VLAPL+R RSY +PQPHA +YYSQRTT GGFLI+EA+ VS+
Sbjct: 10 VPLLTPYKMGRFNLSHRVVLAPLTRQRSYGNVPQPHAAIYYSQRTTPGGFLITEATGVSD 69
Query: 83 TGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYS 142
T +GY+ TPGIWTKE VEAWKPIV V AKGGIFFCQ+ H GR+SN FQPNGKAPIS S
Sbjct: 70 TAQGYQDTPGIWTKEHVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNSGFQPNGKAPISCS 129
Query: 143 DKPLKNQ-PNGGFNAAEFTPPRRLRTGEIPQIVNDF 177
DKPL Q + G + A FTPPRRL EIP IVNDF
Sbjct: 130 DKPLMPQIRSNGIDEALFTPPRRLGIEEIPGIVNDF 165
>pdb|1ICP|A Chain A, Crystal Structure Of 12-Oxophytodienoate Reductase 1 From
Tomato Complexed With Peg400
pdb|1ICP|B Chain B, Crystal Structure Of 12-Oxophytodienoate Reductase 1 From
Tomato Complexed With Peg400
pdb|1ICQ|A Chain A, Crystal Structure Of 12-Oxophytodienoate Reductase 1 From
Tomato Complexed With 9r,13r-Opda
pdb|1ICQ|B Chain B, Crystal Structure Of 12-Oxophytodienoate Reductase 1 From
Tomato Complexed With 9r,13r-Opda
pdb|1ICS|A Chain A, Crystal Structure Of 12-Oxophytodienoate Reductase 1 From
Tomato
pdb|1ICS|B Chain B, Crystal Structure Of 12-Oxophytodienoate Reductase 1 From
Tomato
pdb|3HGR|A Chain A, Crystal Structure Of Tomato Opr1 In Complex With Phb
pdb|3HGR|B Chain B, Crystal Structure Of Tomato Opr1 In Complex With Phb
Length = 376
Score = 229 bits (585), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 109/163 (66%), Positives = 128/163 (78%), Gaps = 1/163 (0%)
Query: 16 EKNNNNIIPLLTPYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEGGFLIS 75
E+ + IPL++P KMG F L HR+VLAPL+R RSY YIPQPHAIL+YSQR+T GG LI
Sbjct: 7 EEKQVDKIPLMSPCKMGKFELCHRVVLAPLTRQRSYGYIPQPHAILHYSQRSTNGGLLIG 66
Query: 76 EASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNG 135
EA+V+SETG GYK PGIWTKEQVEAWKPIV V AKGGIFFCQ+ H GR+SN+DFQPNG
Sbjct: 67 EATVISETGIGYKDVPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNKDFQPNG 126
Query: 136 KAPISYSDKPLKNQ-PNGGFNAAEFTPPRRLRTGEIPQIVNDF 177
+ PIS +D+ L Q + G + A FT PRRL T EIPQIVN+F
Sbjct: 127 EDPISCTDRGLTPQIMSNGIDIAHFTRPRRLTTDEIPQIVNEF 169
>pdb|3HGO|A Chain A, Crystal Structure Of The F74yH244Y OPR3 DOUBLE MUTANT FROM
Tomato
pdb|3HGO|B Chain B, Crystal Structure Of The F74yH244Y OPR3 DOUBLE MUTANT FROM
Tomato
Length = 402
Score = 166 bits (421), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 84/166 (50%), Positives = 109/166 (65%), Gaps = 9/166 (5%)
Query: 17 KNNNNIIPLLTPYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEGGFLISE 76
++ NN PL +PYKMG FNLSHR+VLAP++R R+ + IPQ YY QR T GGFLI+E
Sbjct: 12 QDGNN--PLFSPYKMGKFNLSHRVVLAPMTRCRALNNIPQAALGEYYEQRATAGGFLITE 69
Query: 77 ASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGK 136
+++S T GY H PGI+TKEQV WK IV V AKG + FCQL H GR S+ +QP G
Sbjct: 70 GTMISPTSAGYPHVPGIFTKEQVREWKKIVDVVHAKGAVIFCQLWHVGRASHEVYQPAGA 129
Query: 137 APISYSDKPLKNQ-----PNGGFNAAEFTPPRRLRTGEIPQIVNDF 177
APIS ++KP+ N+ P+G + PR + T EI Q+V D+
Sbjct: 130 APISSTEKPISNRWRILMPDGTHGI--YPKPRAIGTYEISQVVEDY 173
>pdb|2HS6|A Chain A, Crystal Structure Of The E291k Mutant Of 12-
Oxophytodienoate Reductase 3 (Opr3) From Tomato
pdb|2HS6|B Chain B, Crystal Structure Of The E291k Mutant Of 12-
Oxophytodienoate Reductase 3 (Opr3) From Tomato
pdb|2HSA|B Chain B, Crystal Structure Of 12-Oxophytodienoate Reductase 3
(Opr3) From Tomato
pdb|2HSA|A Chain A, Crystal Structure Of 12-Oxophytodienoate Reductase 3
(Opr3) From Tomato
pdb|3HGS|A Chain A, Crystal Structure Of Tomato Opr3 In Complex With Phb
pdb|3HGS|B Chain B, Crystal Structure Of Tomato Opr3 In Complex With Phb
Length = 402
Score = 165 bits (418), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/166 (50%), Positives = 109/166 (65%), Gaps = 9/166 (5%)
Query: 17 KNNNNIIPLLTPYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEGGFLISE 76
++ NN PL +PYKMG FNLSHR+VLAP++R R+ + IPQ YY QR T GGFLI+E
Sbjct: 12 QDGNN--PLFSPYKMGKFNLSHRVVLAPMTRCRALNNIPQAALGEYYEQRATAGGFLITE 69
Query: 77 ASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGK 136
+++S T G+ H PGI+TKEQV WK IV V AKG + FCQL H GR S+ +QP G
Sbjct: 70 GTMISPTSAGFPHVPGIFTKEQVREWKKIVDVVHAKGAVIFCQLWHVGRASHEVYQPAGA 129
Query: 137 APISYSDKPLKNQ-----PNGGFNAAEFTPPRRLRTGEIPQIVNDF 177
APIS ++KP+ N+ P+G + PR + T EI Q+V D+
Sbjct: 130 APISSTEKPISNRWRILMPDGTHGI--YPKPRAIGTYEISQVVEDY 173
>pdb|2HS8|A Chain A, Crystal Structure Of The Y364f Mutant Of 12-
Oxophytodienoate Reductase 3 From Tomato
pdb|2HS8|B Chain B, Crystal Structure Of The Y364f Mutant Of 12-
Oxophytodienoate Reductase 3 From Tomato
Length = 402
Score = 165 bits (418), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/166 (50%), Positives = 109/166 (65%), Gaps = 9/166 (5%)
Query: 17 KNNNNIIPLLTPYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEGGFLISE 76
++ NN PL +PYKMG FNLSHR+VLAP++R R+ + IPQ YY QR T GGFLI+E
Sbjct: 12 QDGNN--PLFSPYKMGKFNLSHRVVLAPMTRCRALNNIPQAALGEYYEQRATAGGFLITE 69
Query: 77 ASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGK 136
+++S T G+ H PGI+TKEQV WK IV V AKG + FCQL H GR S+ +QP G
Sbjct: 70 GTMISPTSAGFPHVPGIFTKEQVREWKKIVDVVHAKGAVIFCQLWHVGRASHEVYQPAGA 129
Query: 137 APISYSDKPLKNQ-----PNGGFNAAEFTPPRRLRTGEIPQIVNDF 177
APIS ++KP+ N+ P+G + PR + T EI Q+V D+
Sbjct: 130 APISSTEKPISNRWRILMPDG--THGIYPKPRAIGTYEISQVVEDY 173
>pdb|1Q45|A Chain A, 12-0xo-Phytodienoate Reductase Isoform 3
pdb|1Q45|B Chain B, 12-0xo-Phytodienoate Reductase Isoform 3
pdb|2G5W|A Chain A, X-Ray Crystal Structure Of Arabidopsis Thaliana
12-Oxophytodienoate Reductase Isoform 3 (Atopr3) In
Complex With 8-Iso Prostaglandin A1 And Its Cofactor,
Flavin Mononucleotide.
pdb|2G5W|B Chain B, X-Ray Crystal Structure Of Arabidopsis Thaliana
12-Oxophytodienoate Reductase Isoform 3 (Atopr3) In
Complex With 8-Iso Prostaglandin A1 And Its Cofactor,
Flavin Mononucleotide.
pdb|2Q3O|A Chain A, Ensemble Refinement Of The Protein Crystal Structure Of
12-Oxo- Phytodienoate Reductase Isoform 3
pdb|2Q3O|B Chain B, Ensemble Refinement Of The Protein Crystal Structure Of
12-Oxo- Phytodienoate Reductase Isoform 3
Length = 391
Score = 160 bits (406), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 105/159 (66%), Gaps = 8/159 (5%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEGGFLISEASVVSETG 84
L + YKMG F+LSHR+VLAP++R R+ + +P YY+QRTT GGFLISE ++VS
Sbjct: 12 LFSSYKMGRFDLSHRVVLAPMTRCRALNGVPNAALAEYYAQRTTPGGFLISEGTMVSPGS 71
Query: 85 RGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDK 144
G+ H PGI++ EQVEAWK +V V AKGG FCQL H GR S+ +QPNG +PIS ++K
Sbjct: 72 AGFPHVPGIYSDEQVEAWKQVVEAVHAKGGFIFCQLWHVGRASHAVYQPNGGSPISSTNK 131
Query: 145 PLKNQ------PNGGFNAAEFTPPRRLRTGEIPQIVNDF 177
P+ P+G + ++ PR L EIP++V D+
Sbjct: 132 PISENRWRVLLPDG--SHVKYPKPRALEASEIPRVVEDY 168
>pdb|3GX9|A Chain A, Structure Of Morphinone Reductase N189a Mutant In Complex
With Tetrahydronad
Length = 377
Score = 121 bits (304), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 93/163 (57%), Gaps = 15/163 (9%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEGGFLISEASVVSETG 84
L TP ++GS +L +R+++APL+R R+ D +P +YY QR + G +ISEA+ +S T
Sbjct: 11 LFTPLQLGSLSLPNRVIMAPLTRSRTPDSVPGRLQQIYYGQRAS-AGLIISEATNISPTA 69
Query: 85 RGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDK 144
RGY +TPGIWT Q WK +V V AKGG QL H GR+S+ QP+G+ P++
Sbjct: 70 RGYVYTPGIWTDAQEAGWKGVVEAVHAKGGRIALQLWHVGRVSHELVQPDGQQPVA---- 125
Query: 145 PLKNQPNGGFNAAEF----------TPPRRLRTGEIPQIVNDF 177
P + G EF + PR L T EIP IV D+
Sbjct: 126 PSALKAEGAECFVEFEDGTAGLHPTSTPRALETDEIPGIVEDY 168
>pdb|2R14|A Chain A, Structure Of Morphinone Reductase In Complex With
Tetrahydronad
Length = 377
Score = 121 bits (304), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 93/163 (57%), Gaps = 15/163 (9%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEGGFLISEASVVSETG 84
L TP ++GS +L +R+++APL+R R+ D +P +YY QR + G +ISEA+ +S T
Sbjct: 11 LFTPLQLGSLSLPNRVIMAPLTRSRTPDSVPGRLQQIYYGQRAS-AGLIISEATNISPTA 69
Query: 85 RGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDK 144
RGY +TPGIWT Q WK +V V AKGG QL H GR+S+ QP+G+ P++
Sbjct: 70 RGYVYTPGIWTDAQEAGWKGVVEAVHAKGGRIALQLWHVGRVSHELVQPDGQQPVA---- 125
Query: 145 PLKNQPNGGFNAAEF----------TPPRRLRTGEIPQIVNDF 177
P + G EF + PR L T EIP IV D+
Sbjct: 126 PSALKAEGAECFVEFEDGTAGLHPTSTPRALETDEIPGIVEDY 168
>pdb|1VYP|X Chain X, Stucture Of Pentaerythritol Tetranitrate Reductase W102f
Mutant And Complexed With Picric Acid
Length = 364
Score = 119 bits (298), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 92/161 (57%), Gaps = 10/161 (6%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMRSYD--YIPQPHAILYYSQRTTEGGFLISEASVVSE 82
L TP K+G+ +R+ +APL+R+RS + IP P YY QR + G +ISEA+ +S
Sbjct: 5 LFTPLKVGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRAS-AGLIISEATQISA 63
Query: 83 TGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYS 142
+GY PG+ + EQ+ AWK I A V A+ G QL H GRIS+ QP G+AP+S S
Sbjct: 64 QAKGYAGAPGLHSPEQIAAWKKITAGVHAEDGRIAVQLFHTGRISHSSIQPGGQAPVSAS 123
Query: 143 D------KPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDF 177
L+++ NG + T PR L EIP IVNDF
Sbjct: 124 ALNANTRTSLRDE-NGNAIRVDTTTPRALELDEIPGIVNDF 163
>pdb|3P67|A Chain A, T26s Mutant Of Pentaerythritol Tetranitrate Reductase
Containing A Bound Acetate Molecule
Length = 373
Score = 119 bits (297), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 92/161 (57%), Gaps = 10/161 (6%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMRSYD--YIPQPHAILYYSQRTTEGGFLISEASVVSE 82
L TP K+G+ +R+ +APLSR+RS + IP P YY QR + G +ISEA+ +S
Sbjct: 6 LFTPLKVGAVTAPNRVFMAPLSRLRSIEPGDIPTPLMGEYYRQRAS-AGLIISEATQISA 64
Query: 83 TGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYS 142
+GY PG+ + EQ+ AWK I A V A+ G QL H GRIS+ QP G+AP+S S
Sbjct: 65 QAKGYAGAPGLHSPEQIAAWKKITAGVHAEDGRIAVQLWHTGRISHSSIQPGGQAPVSAS 124
Query: 143 D------KPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDF 177
L+++ NG + T PR L EIP IVNDF
Sbjct: 125 ALNANTRTSLRDE-NGNAIRVDTTTPRALELDEIPGIVNDF 164
>pdb|1GWJ|A Chain A, Morphinone Reductase
Length = 377
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 92/163 (56%), Gaps = 15/163 (9%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEGGFLISEASVVSETG 84
L TP ++GS +L +R+++APL+R R+ D +P +YY QR + G +ISEA+ +S T
Sbjct: 11 LFTPLQLGSLSLPNRVIMAPLTRSRTPDSVPGRLQQIYYGQRAS-AGLIISEATNISPTA 69
Query: 85 RGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDK 144
RGY +TPGIWT Q WK +V V AKGG QL H GR+S+ QP+G+ P++
Sbjct: 70 RGYVYTPGIWTDAQEAGWKGVVEAVHAKGGRIALQLWHVGRVSHELVQPDGQQPVA---- 125
Query: 145 PLKNQPNGGFNAAEF----------TPPRRLRTGEIPQIVNDF 177
P + G EF + PR L T IP IV D+
Sbjct: 126 PSALKAEGAECFVEFEDGTAGLHPTSTPRALETDGIPGIVEDY 168
>pdb|1VYS|X Chain X, Stucture Of Pentaerythritol Tetranitrate Reductase W102y
Mutant And Complexed With Picric Acid
Length = 364
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 92/161 (57%), Gaps = 10/161 (6%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMRSYD--YIPQPHAILYYSQRTTEGGFLISEASVVSE 82
L TP K+G+ +R+ +APL+R+RS + IP P YY QR + G +ISEA+ +S
Sbjct: 5 LFTPLKVGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRAS-AGLIISEATQISA 63
Query: 83 TGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYS 142
+GY PG+ + EQ+ AWK I A V A+ G QL H GRIS+ QP G+AP+S S
Sbjct: 64 QAKGYAGAPGLHSPEQIAAWKKITAGVHAEDGRIAVQLYHTGRISHSSIQPGGQAPVSAS 123
Query: 143 D------KPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDF 177
L+++ NG + T PR L EIP IVNDF
Sbjct: 124 ALNANTRTSLRDE-NGNAIRVDTTTPRALELDEIPGIVNDF 163
>pdb|3P84|A Chain A, Y351a Mutant Of Pentaerythritol Tetranitrate Reductase
Containing A Bound Acetate Molecule
Length = 365
Score = 118 bits (295), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 92/161 (57%), Gaps = 10/161 (6%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMRSYD--YIPQPHAILYYSQRTTEGGFLISEASVVSE 82
L TP K+G+ +R+ +APL+R+RS + IP P YY QR + G +ISEA+ +S
Sbjct: 6 LFTPLKVGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRAS-AGLIISEATQISA 64
Query: 83 TGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYS 142
+GY PG+ + EQ+ AWK I A V A+ G QL H GRIS+ QP G+AP+S S
Sbjct: 65 QAKGYAGAPGLHSPEQIAAWKKITAGVHAEDGRIAVQLWHTGRISHSSIQPGGQAPVSAS 124
Query: 143 D------KPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDF 177
L+++ NG + T PR L EIP IVNDF
Sbjct: 125 ALNANTRTSLRDE-NGNAIRVDTTTPRALELDEIPGIVNDF 164
>pdb|3P8J|A Chain A, Y351s Mutant Of Pentaerythritol Tetranitrate Reductase
Containing A Bound Acetate Molecule
Length = 365
Score = 118 bits (295), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 92/161 (57%), Gaps = 10/161 (6%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMRSYD--YIPQPHAILYYSQRTTEGGFLISEASVVSE 82
L TP K+G+ +R+ +APL+R+RS + IP P YY QR + G +ISEA+ +S
Sbjct: 6 LFTPLKVGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRAS-AGLIISEATQISA 64
Query: 83 TGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYS 142
+GY PG+ + EQ+ AWK I A V A+ G QL H GRIS+ QP G+AP+S S
Sbjct: 65 QAKGYAGAPGLHSPEQIAAWKKITAGVHAEDGRIAVQLWHTGRISHSSIQPGGQAPVSAS 124
Query: 143 D------KPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDF 177
L+++ NG + T PR L EIP IVNDF
Sbjct: 125 ALNANTRTSLRDE-NGNAIRVDTTTPRALELDEIPGIVNDF 164
>pdb|3P74|A Chain A, H181n Mutant Of Pentaerythritol Tetranitrate Reductase
Containing A C- Terminal His8-Tag
Length = 373
Score = 118 bits (295), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 92/161 (57%), Gaps = 10/161 (6%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMRSYD--YIPQPHAILYYSQRTTEGGFLISEASVVSE 82
L TP K+G+ +R+ +APL+R+RS + IP P YY QR + G +ISEA+ +S
Sbjct: 6 LFTPLKVGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRAS-AGLIISEATQISA 64
Query: 83 TGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYS 142
+GY PG+ + EQ+ AWK I A V A+ G QL H GRIS+ QP G+AP+S S
Sbjct: 65 QAKGYAGAPGLHSPEQIAAWKKITAGVHAEDGRIAVQLWHTGRISHSSIQPGGQAPVSAS 124
Query: 143 D------KPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDF 177
L+++ NG + T PR L EIP IVNDF
Sbjct: 125 ALNANTRTSLRDE-NGNAIRVDTTTPRALELDEIPGIVNDF 164
>pdb|3P82|A Chain A, H184n Mutant Of Pentaerythritol Tetranitrate Reductase
Containing Bound Acetate Ion
Length = 365
Score = 118 bits (295), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 92/161 (57%), Gaps = 10/161 (6%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMRSYD--YIPQPHAILYYSQRTTEGGFLISEASVVSE 82
L TP K+G+ +R+ +APL+R+RS + IP P YY QR + G +ISEA+ +S
Sbjct: 6 LFTPLKVGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRAS-AGLIISEATQISA 64
Query: 83 TGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYS 142
+GY PG+ + EQ+ AWK I A V A+ G QL H GRIS+ QP G+AP+S S
Sbjct: 65 QAKGYAGAPGLHSPEQIAAWKKITAGVHAEDGRIAVQLWHTGRISHSSIQPGGQAPVSAS 124
Query: 143 D------KPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDF 177
L+++ NG + T PR L EIP IVNDF
Sbjct: 125 ALNANTRTSLRDE-NGNAIRVDTTTPRALELDEIPGIVNDF 164
>pdb|3P7Y|A Chain A, Pentaerythritol Tetranitrate Reductase Co-Crystal
Structure With Bound
(E)-1-(2'-Hydroxyphenyl)-2-Nitroethene
pdb|3P80|A Chain A, Pentaerythritol Tetranitrate Reductase Co-Crystal
Structure Containing Bound
(E)-1-(3'-Hydroxyphenyl)-2-Nitroethene
pdb|3P81|A Chain A, Pentaerythritol Tetranitrate Reductase Co-Crystal
Structure Containing A Bound
(E)-1-(4'-Hydroxyphenyl)-2-Nitroethene Molecule
Length = 365
Score = 118 bits (295), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 92/161 (57%), Gaps = 10/161 (6%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMRSYD--YIPQPHAILYYSQRTTEGGFLISEASVVSE 82
L TP K+G+ +R+ +APL+R+RS + IP P YY QR + G +ISEA+ +S
Sbjct: 6 LFTPLKVGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRAS-AGLIISEATQISA 64
Query: 83 TGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYS 142
+GY PG+ + EQ+ AWK I A V A+ G QL H GRIS+ QP G+AP+S S
Sbjct: 65 QAKGYAGAPGLHSPEQIAAWKKITAGVHAEDGRIAVQLWHTGRISHSSIQPGGQAPVSAS 124
Query: 143 D------KPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDF 177
L+++ NG + T PR L EIP IVNDF
Sbjct: 125 ALNANTRTSLRDE-NGNAIRVDTTTPRALELDEIPGIVNDF 164
>pdb|3P62|A Chain A, Wild-Type Pentaerythritol Tetranitrate Reductase
Containing A C- Terminal 8-Histidine Tag
Length = 373
Score = 118 bits (295), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 92/161 (57%), Gaps = 10/161 (6%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMRSYD--YIPQPHAILYYSQRTTEGGFLISEASVVSE 82
L TP K+G+ +R+ +APL+R+RS + IP P YY QR + G +ISEA+ +S
Sbjct: 6 LFTPLKVGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRAS-AGLIISEATQISA 64
Query: 83 TGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYS 142
+GY PG+ + EQ+ AWK I A V A+ G QL H GRIS+ QP G+AP+S S
Sbjct: 65 QAKGYAGAPGLHSPEQIAAWKKITAGVHAEDGRIAVQLWHTGRISHSSIQPGGQAPVSAS 124
Query: 143 D------KPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDF 177
L+++ NG + T PR L EIP IVNDF
Sbjct: 125 ALNANTRTSLRDE-NGNAIRVDTTTPRALELDEIPGIVNDF 164
>pdb|3P8I|A Chain A, Y351f Mutant Of Pentaerythritol Tetranitrate Reductase
Containing A Bound Acetate Molecule
Length = 365
Score = 117 bits (294), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 92/161 (57%), Gaps = 10/161 (6%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMRSYD--YIPQPHAILYYSQRTTEGGFLISEASVVSE 82
L TP K+G+ +R+ +APL+R+RS + IP P YY QR + G +ISEA+ +S
Sbjct: 6 LFTPLKVGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRAS-AGLIISEATQISA 64
Query: 83 TGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYS 142
+GY PG+ + EQ+ AWK I A V A+ G QL H GRIS+ QP G+AP+S S
Sbjct: 65 QAKGYAGAPGLHSPEQIAAWKKITAGVHAEDGRIAVQLWHTGRISHSSIQPGGQAPVSAS 124
Query: 143 D------KPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDF 177
L+++ NG + T PR L EIP IVNDF
Sbjct: 125 ALNANTRTSLRDE-NGNAIRVDTTTPRALELDEIPGIVNDF 164
>pdb|2ABB|A Chain A, Structure Of Petn Reductase Y186f In Complex With Cyanide
Length = 364
Score = 117 bits (294), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 92/161 (57%), Gaps = 10/161 (6%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMRSYD--YIPQPHAILYYSQRTTEGGFLISEASVVSE 82
L TP K+G+ +R+ +APL+R+RS + IP P YY QR + G +ISEA+ +S
Sbjct: 5 LFTPLKVGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRAS-AGLIISEATQISA 63
Query: 83 TGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYS 142
+GY PG+ + EQ+ AWK I A V A+ G QL H GRIS+ QP G+AP+S S
Sbjct: 64 QAKGYAGAPGLHSPEQIAAWKKITAGVHAEDGRIAVQLWHTGRISHSSIQPGGQAPVSAS 123
Query: 143 D------KPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDF 177
L+++ NG + T PR L EIP IVNDF
Sbjct: 124 ALNANTRTSLRDE-NGNAIRVDTTTPRALELDEIPGIVNDF 163
>pdb|1H50|A Chain A, Stucture Of Pentaerythritol Tetranitrate Reductase And
Complexes
pdb|1H60|A Chain A, Structure Of Pentaerythritol Tetranitrate Reductase In
Complex With Progesterone
pdb|1H61|A Chain A, Structure Of Pentaerythritol Tetranitrate Reductase In
Complex With Prednisone
pdb|1H62|A Chain A, Structure Of Pentaerythritol Tetranitrate Reductase In
Complex With 1,4-Androstadien-3,17-Dione
pdb|1H63|A Chain A, Structure Of The Reduced Pentaerythritol Tetranitrate
Reductase
pdb|1GVO|A Chain A, Stucture Of Pentaerythritol Tetranitrate Reductase And
Complexed With 2,4 Dinitrophenol
pdb|1GVQ|A Chain A, Stucture Of Pentaerythritol Tetranitrate Reductase And
Complexed With Cyclohexanone
pdb|1GVR|A Chain A, Stucture Of Pentaerythritol Tetranitrate Reductase And
Complexed With 2,4,6 Trinitrotoluene
pdb|1GVS|A Chain A, Stucture Of Pentaerythritol Tetranitrate Reductase And
Complexed With Picric Acid
pdb|1H51|A Chain A, Stucture Of Pentaerythritol Tetranirate Reductase And
Complexes
pdb|1VYR|A Chain A, Stucture Of Pentaerythritol Tetranirate Reductase
Complexed With Picric Acid
pdb|2ABA|A Chain A, Structure Of Reduced Petn Reductase In Complex With
Progesterone
pdb|3F03|K Chain K, Crystal Structure Of Pentaerythritol Tetranitrate
Reductase Complex With 1-Nitrocyclohexene
pdb|3KFT|A Chain A, Crystal Structure Of Pentaerythritol Tetranitrate
Reductase Complex With 1,4,5,6-Tetrahydro Nadh
pdb|3KFT|B Chain B, Crystal Structure Of Pentaerythritol Tetranitrate
Reductase Complex With 1,4,5,6-Tetrahydro Nadh
Length = 364
Score = 117 bits (294), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 92/161 (57%), Gaps = 10/161 (6%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMRSYD--YIPQPHAILYYSQRTTEGGFLISEASVVSE 82
L TP K+G+ +R+ +APL+R+RS + IP P YY QR + G +ISEA+ +S
Sbjct: 5 LFTPLKVGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRAS-AGLIISEATQISA 63
Query: 83 TGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYS 142
+GY PG+ + EQ+ AWK I A V A+ G QL H GRIS+ QP G+AP+S S
Sbjct: 64 QAKGYAGAPGLHSPEQIAAWKKITAGVHAEDGRIAVQLWHTGRISHSSIQPGGQAPVSAS 123
Query: 143 D------KPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDF 177
L+++ NG + T PR L EIP IVNDF
Sbjct: 124 ALNANTRTSLRDE-NGNAIRVDTTTPRALELDEIPGIVNDF 163
>pdb|4AB4|A Chain A, Structure Of Xenobiotic Reductase B From Pseudomonas
Putida In Complex With Tnt
pdb|4AB4|B Chain B, Structure Of Xenobiotic Reductase B From Pseudomonas
Putida In Complex With Tnt
pdb|4AEO|A Chain A, Structure Of Xenobiotic Reductase B From Pseudomonas
Putida In Complex With Tnt
pdb|4AEO|B Chain B, Structure Of Xenobiotic Reductase B From Pseudomonas
Putida In Complex With Tnt
Length = 362
Score = 104 bits (259), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 88/159 (55%), Gaps = 13/159 (8%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAIL--YYSQRTTEGGFLISEASVVSE 82
L P K+G L +RI++APL+R R+ D P+A++ YY QR + G ++SEA+ VS
Sbjct: 4 LFDPIKLGDLQLPNRIIMAPLTRCRA-DEGRVPNALMAEYYVQRAS-AGLILSEATSVSP 61
Query: 83 TGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYS 142
G GY TPGIW EQV W + V A GG F QL H GRIS+ + NG+ P++
Sbjct: 62 MGVGYPDTPGIWNDEQVRGWNNVTKAVHAAGGRIFLQLWHVGRISHPSYL-NGELPVA-- 118
Query: 143 DKPLKNQPNGGFN----AAEFTPPRRLRTGEIPQIVNDF 177
P QP G + +++ PR L T EI IV +
Sbjct: 119 --PSAIQPKGHVSLVRPLSDYPTPRALETEEINDIVEAY 155
>pdb|3GKA|A Chain A, Crystal Structure Of N-Ethylmaleimidine Reductase From
Burkholderia Pseudomallei
pdb|3GKA|B Chain B, Crystal Structure Of N-Ethylmaleimidine Reductase From
Burkholderia Pseudomallei
Length = 361
Score = 103 bits (257), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 88/159 (55%), Gaps = 13/159 (8%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAIL--YYSQRTTEGGFLISEASVVSE 82
L P +G L++RI++APL+R R+ D P+A++ YY++R + G +ISEA+ V+
Sbjct: 12 LFDPLTIGDLTLANRIIMAPLTRARAGD-TRTPNALMARYYAERAS-AGLIISEATSVTP 69
Query: 83 TGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYS 142
G GY TPGIW+ EQV+ W+ + V A GG F QL H GR+S+ F +G P++
Sbjct: 70 QGVGYASTPGIWSPEQVDGWRLVTDAVHAAGGRIFLQLWHVGRVSDPVFL-DGALPVA-- 126
Query: 143 DKPLKNQPNGGFNAAE----FTPPRRLRTGEIPQIVNDF 177
P P G + + PR L EIP +V F
Sbjct: 127 --PSAIAPGGHVSLVRPQRPYVTPRALELDEIPGVVAAF 163
>pdb|4A3U|A Chain A, X-Structure Of The Old Yellow Enzyme Homologue From
Zymomonas Mobilis (Ncr)
pdb|4A3U|B Chain B, X-Structure Of The Old Yellow Enzyme Homologue From
Zymomonas Mobilis (Ncr)
Length = 358
Score = 100 bits (250), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 89/158 (56%), Gaps = 12/158 (7%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMRSY-DYIPQPHAILYYSQRTTEGGFLISEASVVSET 83
L P + G+F +RI +APL+R R+ D++P YY+QR + G +ISEA+ +S+
Sbjct: 4 LFDPIRFGAFTAKNRIWMAPLTRGRATRDHVPTEIMAEYYAQRAS-AGLIISEATGISQE 62
Query: 84 GRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSD 143
G G+ + PGIW+ QVEAW PI V GG+ F QL H GR+ + +G P++
Sbjct: 63 GLGWPYAPGIWSDAQVEAWLPITQAVHDAGGLIFAQLWHMGRMVPSNV--SGMQPVA--- 117
Query: 144 KPLKNQPNGGFNAAEFTPP----RRLRTGEIPQIVNDF 177
P +Q G + + P R LR EIP++++D+
Sbjct: 118 -PSASQAPGLGHTYDGKKPYDVARALRLDEIPRLLDDY 154
>pdb|2GOU|A Chain A, Structure Of Wild Type, Oxidized Sye1, An Oye Homologue
From S. Oneidensis
pdb|2GQ8|A Chain A, Structure Of Sye1, An Oye Homologue From S. Ondeidensis,
In Complex With P-Hydroxyacetophenone
pdb|2GQ9|A Chain A, Structure Of Sye1, An Oye Homologue From S. Oneidensis, In
Complex With P-Hydroxybenzaldehyde
pdb|2GQA|A Chain A, Structure Of Nadh-Reduced Sye1, An Oye Homologue From S.
Oneidensis
Length = 365
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 89/167 (53%), Gaps = 22/167 (13%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAI------LYYSQRTTEGGFLISEAS 78
L P +G+ L +RIV+ P++R R+ QP + +YY+QR + G ++SE +
Sbjct: 5 LFQPITLGALTLKNRIVMPPMTRSRA----SQPGDVANHMMAIYYAQRAS-AGLIVSEGT 59
Query: 79 VVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAP 138
+S T +GY TPGI+T EQ+ W+ + V AKG F QL H GR+++ D +G+ P
Sbjct: 60 QISPTAKGYAWTPGIYTPEQIAGWRIVTEAVHAKGCAIFAQLWHVGRVTHPD-NIDGQQP 118
Query: 139 ISYSDKPLKN----QPNG----GFNAAEFTPPRRLRTGEIPQIVNDF 177
IS S +N NG GF + PR + +I Q++ D+
Sbjct: 119 ISSSTLKAENVKVFVDNGSDEPGF--VDVAVPRAMTKADIAQVIADY 163
>pdb|3ATY|A Chain A, Crystal Structure Of Tcoye
pdb|3ATY|B Chain B, Crystal Structure Of Tcoye
pdb|3ATZ|A Chain A, Crystal Structure Of Tcoye With Phba
pdb|3ATZ|B Chain B, Crystal Structure Of Tcoye With Phba
pdb|3ATZ|C Chain C, Crystal Structure Of Tcoye With Phba
pdb|3ATZ|D Chain D, Crystal Structure Of Tcoye With Phba
Length = 379
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 66/103 (64%), Gaps = 2/103 (1%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMRSY--DYIPQPHAILYYSQRTTEGGFLISEASVVSE 82
LL P K+G + L +RI++APL+R ++ D++P+ ++L Y + G +I+EA++V
Sbjct: 7 LLRPLKLGRYTLRNRIIMAPLTRCQATEDDHVPRTESMLKYYEDRASAGLIIAEATMVQP 66
Query: 83 TGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGR 125
G+ PGI++ Q+E W+ IV V KGG+ F QL+HAGR
Sbjct: 67 NYTGFLTEPGIYSDAQIEEWRKIVDAVHKKGGLIFLQLIHAGR 109
>pdb|3KRU|A Chain A, Crystal Structure Of The Thermostable Old Yellow Enzyme
From Thermoanaerobacter Pseudethanolicus E39
pdb|3KRU|B Chain B, Crystal Structure Of The Thermostable Old Yellow Enzyme
From Thermoanaerobacter Pseudethanolicus E39
pdb|3KRU|C Chain C, Crystal Structure Of The Thermostable Old Yellow Enzyme
From Thermoanaerobacter Pseudethanolicus E39
pdb|3KRU|D Chain D, Crystal Structure Of The Thermostable Old Yellow Enzyme
From Thermoanaerobacter Pseudethanolicus E39
Length = 343
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 72/156 (46%), Gaps = 17/156 (10%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMR-SYDYIPQPHAILYYSQRTTEG-GFLISEASVVSE 82
L P K+ + +RI+++P+ S D +P I++Y+ R G G ++ EA+ V
Sbjct: 4 LHMPLKIKDITIKNRIMMSPMCMYSASTDGMPNDWHIVHYATRAIGGVGLIMQEATAVES 63
Query: 83 TGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQP-NGKAPISY 141
GR H GIW EQV+ K IV +A G + QL HAGR N ++ G +PI
Sbjct: 64 RGRITDHDLGIWNDEQVKELKKIVDICKANGAVMGIQLAHAGRKCNISYEDVVGPSPIKA 123
Query: 142 SDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDF 177
D+ + PR L EI IV F
Sbjct: 124 GDR--------------YKLPRELSVEEIKSIVKAF 145
>pdb|3KRZ|A Chain A, Crystal Structure Of The Thermostable Nadh4-Bound Old
Yellow Enzyme From Thermoanaerobacter Pseudethanolicus
E39
pdb|3KRZ|B Chain B, Crystal Structure Of The Thermostable Nadh4-Bound Old
Yellow Enzyme From Thermoanaerobacter Pseudethanolicus
E39
pdb|3KRZ|C Chain C, Crystal Structure Of The Thermostable Nadh4-Bound Old
Yellow Enzyme From Thermoanaerobacter Pseudethanolicus
E39
pdb|3KRZ|D Chain D, Crystal Structure Of The Thermostable Nadh4-Bound Old
Yellow Enzyme From Thermoanaerobacter Pseudethanolicus
E39
Length = 337
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 72/156 (46%), Gaps = 17/156 (10%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMR-SYDYIPQPHAILYYSQRTTEG-GFLISEASVVSE 82
L P K+ + +RI+++P+ S D +P I++Y+ R G G ++ EA+ V
Sbjct: 4 LHMPLKIKDITIKNRIMMSPMCMYSASTDGMPNDWHIVHYATRAIGGVGLIMQEATAVES 63
Query: 83 TGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQP-NGKAPISY 141
GR H GIW EQV+ K IV +A G + QL HAGR N ++ G +PI
Sbjct: 64 RGRITDHDLGIWNDEQVKELKKIVDICKANGAVMGIQLAHAGRKCNISYEDVVGPSPIKA 123
Query: 142 SDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDF 177
D+ + PR L EI IV F
Sbjct: 124 GDR--------------YKLPRELSVEEIKSIVKAF 145
>pdb|4DF2|A Chain A, P. Stipitis Oye2.6 Complexed With P-Chlorophenol
Length = 407
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 76/151 (50%), Gaps = 9/151 (5%)
Query: 30 KMGSFNLSHRIVLAPLSRMRSY-DYIPQPHAILYYSQRTT-EGGFLISEASVVSETGRGY 87
K+G+ L +IV P +R R+ D+ P + YY R+T G LI+EA+ VS GY
Sbjct: 19 KVGNNTLQTKIVYPPTTRFRALEDHTPSDLQLQYYGDRSTFPGTLLITEATFVSPQASGY 78
Query: 88 K-HTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISN-RDFQPNGKAPISYSDKP 145
+ PGIWT + +AWK I +V A G QL+ GR+++ + G P+S S
Sbjct: 79 EGAAPGIWTDKHAKAWKVITDKVHANGSFVSTQLIFLGRVADPAVMKTRGLNPVSAS--- 135
Query: 146 LKNQPNGGFNAAEFT--PPRRLRTGEIPQIV 174
+ + AAE P R L T E+ +V
Sbjct: 136 ATYESDAAKEAAEAVGNPVRALTTQEVKDLV 166
>pdb|3TJL|A Chain A, Crystal Structure Of A Novel Oye From The
Xylose-Fermenting Fungus P. Stipitis
pdb|3UPW|A Chain A, Pichia Stipitis Oye2.6 Complexed With Nicotinamide
Length = 407
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 76/151 (50%), Gaps = 9/151 (5%)
Query: 30 KMGSFNLSHRIVLAPLSRMRSY-DYIPQPHAILYYSQRTT-EGGFLISEASVVSETGRGY 87
K+G+ L +IV P +R R+ D+ P + YY R+T G LI+EA+ VS GY
Sbjct: 19 KVGNNTLQTKIVYPPTTRFRALEDHTPSDLQLQYYGDRSTFPGTLLITEATFVSPQASGY 78
Query: 88 K-HTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISN-RDFQPNGKAPISYSDKP 145
+ PGIWT + +AWK I +V A G QL+ GR+++ + G P+S S
Sbjct: 79 EGAAPGIWTDKHAKAWKVITDKVHANGSFVSTQLIFLGRVADPAVMKTRGLNPVSAS--- 135
Query: 146 LKNQPNGGFNAAEFT--PPRRLRTGEIPQIV 174
+ + AAE P R L T E+ +V
Sbjct: 136 ATYESDAAKEAAEAVGNPVRALTTQEVKDLV 166
>pdb|4GWE|A Chain A, W116l-Oye1 Complexed With (R)-Carvone
pdb|4GXM|A Chain A, Oye1-W116l In Complex With Aromatic Product Of R-Carvone
Dismutation
Length = 400
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 73/158 (46%), Gaps = 5/158 (3%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMRSYD--YIP-QPHAILYYSQRTTE-GGFLISEASVV 80
L P K+G+ L HR V+ PL+RMR+ IP + A+ YY+QR G +I+E + +
Sbjct: 17 LFKPIKIGNNELLHRAVIPPLTRMRALHPGNIPNRDWAVEYYTQRAQRPGTMIITEGAFI 76
Query: 81 SETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRD-FQPNGKAPI 139
S GY + PG+W++EQ+ W I + K + QLL G + D +G
Sbjct: 77 SPQAGGYDNAPGVWSEEQMVEWTKIFNAIHEKKSFVWVQLLVLGWAAFPDNLARDGLRYD 136
Query: 140 SYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDF 177
S SD + P L EI Q + ++
Sbjct: 137 SASDNVFMDAEQEAKAKKANNPQHSLTKDEIKQYIKEY 174
>pdb|4GE8|A Chain A, Oye1-W116i Complexed With (S)-Carvone
Length = 400
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 5/158 (3%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMRSYD--YIP-QPHAILYYSQRTTE-GGFLISEASVV 80
L P K+G+ L HR V+ PL+RMR+ IP + A+ YY+QR G +I+E + +
Sbjct: 17 LFKPIKIGNNELLHRAVIPPLTRMRALHPGNIPNRDWAVEYYTQRAQRPGTMIITEGAFI 76
Query: 81 SETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRD-FQPNGKAPI 139
S GY + PG+W++EQ+ W I + K + QL+ G + D +G
Sbjct: 77 SPQAGGYDNAPGVWSEEQMVEWTKIFNAIHEKKSFVWVQLIVLGWAAFPDNLARDGLRYD 136
Query: 140 SYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDF 177
S SD + P L EI Q + ++
Sbjct: 137 SASDNVFMDAEQEAKAKKANNPQHSLTKDEIKQYIKEY 174
>pdb|3RND|A Chain A, W116i-Oye1 Complexed With
2-(Hydroxymethyl)-Cyclopent-2-Enone
Length = 399
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 5/158 (3%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMRSYD--YIP-QPHAILYYSQRTTE-GGFLISEASVV 80
L P K+G+ L HR V+ PL+RMR+ IP + A+ YY+QR G +I+E + +
Sbjct: 16 LFKPIKIGNNELLHRAVIPPLTRMRALHPGNIPNRDWAVEYYTQRAQRPGTMIITEGAFI 75
Query: 81 SETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRD-FQPNGKAPI 139
S GY + PG+W++EQ+ W I + K + QL+ G + D +G
Sbjct: 76 SPQAGGYDNAPGVWSEEQMVEWTKIFNAIHEKKSFVWVQLIVLGWAAFPDNLARDGLRYD 135
Query: 140 SYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDF 177
S SD + P L EI Q + ++
Sbjct: 136 SASDNVFMDAEQEAKAKKANNPQHSLTKDEIKQYIKEY 173
>pdb|1OYA|A Chain A, Old Yellow Enzyme At 2 Angstroms Resolution: Overall
Structure, Ligand Binding And Comparison With Related
Flavoproteins
pdb|1OYB|A Chain A, Old Yellow Enzyme At 2 Angstroms Resolution: Overall
Structure, Ligand Binding And Comparison With Related
Flavoproteins
pdb|1OYC|A Chain A, Old Yellow Enzyme At 2 Angstroms Resolution: Overall
Structure, Ligand Binding And Comparison With Related
Flavoproteins
pdb|3TX9|A Chain A, Oye1 Complexed With 2-(Hydroxymethyl)-Cyclopent-2-Enone
Length = 400
Score = 66.6 bits (161), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 5/158 (3%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMRSYD--YIP-QPHAILYYSQRTTE-GGFLISEASVV 80
L P K+G+ L HR V+ PL+RMR+ IP + A+ YY+QR G +I+E + +
Sbjct: 17 LFKPIKIGNNELLHRAVIPPLTRMRALHPGNIPNRDWAVEYYTQRAQRPGTMIITEGAFI 76
Query: 81 SETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRD-FQPNGKAPI 139
S GY + PG+W++EQ+ W I + K + QL G + D +G
Sbjct: 77 SPQAGGYDNAPGVWSEEQMVEWTKIFNAIHEKKSFVWVQLWVLGWAAFPDNLARDGLRYD 136
Query: 140 SYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDF 177
S SD + P L EI Q + ++
Sbjct: 137 SASDNVFMDAEQEAKAKKANNPQHSLTKDEIKQYIKEY 174
>pdb|1BWL|A Chain A, Old Yellow Enzyme (Oye1) Double Mutant H191n:n194h
Length = 399
Score = 66.6 bits (161), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 5/158 (3%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMRSYD--YIP-QPHAILYYSQRTTE-GGFLISEASVV 80
L P K+G+ L HR V+ PL+RMR+ IP + A+ YY+QR G +I+E + +
Sbjct: 16 LFKPIKIGNNELLHRAVIPPLTRMRALHPGNIPNRDWAVEYYTQRAQRPGTMIITEGAFI 75
Query: 81 SETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRD-FQPNGKAPI 139
S GY + PG+W++EQ+ W I + K + QL G + D +G
Sbjct: 76 SPQAGGYDNAPGVWSEEQMVEWTKIFNAIHEKKSFVWVQLWVLGWAAFPDNLARDGLRYD 135
Query: 140 SYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDF 177
S SD + P L EI Q + ++
Sbjct: 136 SASDNVFMDAEQEAKAKKANNPQHSLTKDEIKQYIKEY 173
>pdb|1BWK|A Chain A, Old Yellow Enzyme (Oye1) Mutant H191n
Length = 399
Score = 66.6 bits (161), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 5/158 (3%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMRSY--DYIP-QPHAILYYSQRTTE-GGFLISEASVV 80
L P K+G+ L HR V+ PL+RMR+ IP + A+ YY+QR G +I+E + +
Sbjct: 16 LFKPIKIGNNELLHRAVIPPLTRMRALHPGNIPNRDWAVEYYTQRAQRPGTMIITEGAFI 75
Query: 81 SETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRD-FQPNGKAPI 139
S GY + PG+W++EQ+ W I + K + QL G + D +G
Sbjct: 76 SPQAGGYDNAPGVWSEEQMVEWTKIFNAIHEKKSFVWVQLWVLGWAAFPDNLARDGLRYD 135
Query: 140 SYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDF 177
S SD + P L EI Q + ++
Sbjct: 136 SASDNVFMDAEQEAKAKKANNPQHSLTKDEIKQYIKEY 173
>pdb|4GBU|A Chain A, Oye1-W116a In Complex With Aromatic Product Of S-Carvone
Dismutation
Length = 400
Score = 66.6 bits (161), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 5/158 (3%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMRSYD--YIP-QPHAILYYSQRTTE-GGFLISEASVV 80
L P K+G+ L HR V+ PL+RMR+ IP + A+ YY+QR G +I+E + +
Sbjct: 17 LFKPIKIGNNELLHRAVIPPLTRMRALHPGNIPNRDWAVEYYTQRAQRPGTMIITEGAFI 76
Query: 81 SETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRD-FQPNGKAPI 139
S GY + PG+W++EQ+ W I + K + QL G + D +G
Sbjct: 77 SPQAGGYDNAPGVWSEEQMVEWTKIFNAIHEKKSFVWVQLAVLGWAAFPDNLARDGLRYD 136
Query: 140 SYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDF 177
S SD + P L EI Q + ++
Sbjct: 137 SASDNVFMDAEQEAKAKKANNPQHSLTKDEIKQYIKEY 174
>pdb|3TXZ|A Chain A, Oye1-W116q Complexed With R-Carvone
Length = 400
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMRSYD--YIP-QPHAILYYSQRTTE-GGFLISEASVV 80
L P K+G+ L HR V+ PL+RMR+ IP + A+ YY+QR G +I+E + +
Sbjct: 17 LFKPIKIGNNELLHRAVIPPLTRMRALHPGNIPNRDWAVEYYTQRAQRPGTMIITEGAFI 76
Query: 81 SETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQL 120
S GY + PG+W++EQ+ W I + K + QL
Sbjct: 77 SPQAGGYDNAPGVWSEEQMVEWTKIFNAIHEKKSFVWVQL 116
>pdb|1K02|A Chain A, Crystal Structure Of Old Yellow Enzyme Mutant Gln114asn
pdb|1K03|A Chain A, Crystal Structure Of Old Yellow Enzyme Mutant Gln114asn
Complexed With Para-Hydroxy Benzaldehyde
Length = 399
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 5/158 (3%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMRSYD--YIP-QPHAILYYSQRTTE-GGFLISEASVV 80
L P K+G+ L HR V+ PL+RMR+ IP + A+ YY+QR G +I+E + +
Sbjct: 16 LFKPIKIGNNELLHRAVIPPLTRMRALHPGNIPNRDWAVEYYTQRAQRPGTMIITEGAFI 75
Query: 81 SETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRD-FQPNGKAPI 139
S GY + PG+W++EQ+ W I + K + L G + D +G
Sbjct: 76 SPQAGGYDNAPGVWSEEQMVEWTKIFNAIHEKKSFVWVNLWVLGWAAFPDNLARDGLRYD 135
Query: 140 SYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDF 177
S SD + P L EI Q + ++
Sbjct: 136 SASDNVFMDAEQEAKAKKANNPQHSLTKDEIKQYIKEY 173
>pdb|3L67|A Chain A, Xenobiotic Reductase A - C25s Variant
pdb|3L68|A Chain A, Xenobiotic Reductase A - C25s Variant With Coumarin
Length = 363
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 4/157 (2%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMRSYD-YIPQPHAILYYSQRTTEGGFLISEASVVSET 83
L PY + L +RI + P+S+ + D I H + G L+ EA+ V+
Sbjct: 4 LFEPYTLKDVTLRNRIAIPPMSQYMAEDGMINDWHHVHLAGLARGGAGLLVVEATAVAPE 63
Query: 84 GRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSD 143
GR GIW+ +A+ P+V ++A G + Q+ HAGR ++ + G I+ D
Sbjct: 64 GRITPGCAGIWSDAHAQAFVPVVQAIKAAGSVPGIQIAHAGRKASANRPWEGDDHIAADD 123
Query: 144 KPLKN--QPNG-GFNAAEFTPPRRLRTGEIPQIVNDF 177
P+ F A PR + +I ++ DF
Sbjct: 124 TRGWETIAPSAIAFGAHLPKVPREMTLDDIARVKQDF 160
>pdb|3L65|A Chain A, Xenobiotic Reductase A - C25a Mutant
pdb|3L66|A Chain A, Xenobiotic Reductase A - C25a Variant With Coumarin
Length = 363
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 4/157 (2%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMRSYD-YIPQPHAILYYSQRTTEGGFLISEASVVSET 83
L PY + L +RI + P+++ + D I H + G L+ EA+ V+
Sbjct: 4 LFEPYTLKDVTLRNRIAIPPMAQYMAEDGMINDWHHVHLAGLARGGAGLLVVEATAVAPE 63
Query: 84 GRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSD 143
GR GIW+ +A+ P+V ++A G + Q+ HAGR ++ + G I+ D
Sbjct: 64 GRITPGCAGIWSDAHAQAFVPVVQAIKAAGSVPGIQIAHAGRKASANRPWEGDDHIAADD 123
Query: 144 KPLKN--QPNG-GFNAAEFTPPRRLRTGEIPQIVNDF 177
P+ F A PR + +I ++ DF
Sbjct: 124 TRGWETIAPSAIAFGAHLPKVPREMTLDDIARVKQDF 160
>pdb|1Z41|A Chain A, Crystal Structure Of Oxidized Yqjm From Bacillus Subtilis
pdb|1Z41|B Chain B, Crystal Structure Of Oxidized Yqjm From Bacillus Subtilis
pdb|1Z42|A Chain A, Crystal Structure Of Oxidized Yqjm From Bacillus Subtilis
Complexed With P-Hydroxybenzaldehyde
pdb|1Z42|B Chain B, Crystal Structure Of Oxidized Yqjm From Bacillus Subtilis
Complexed With P-Hydroxybenzaldehyde
pdb|1Z44|A Chain A, Crystal Structure Of Oxidized Yqjm From Bacillus Subtilis
Complexed With P-Nitrophenol
pdb|1Z44|B Chain B, Crystal Structure Of Oxidized Yqjm From Bacillus Subtilis
Complexed With P-Nitrophenol
pdb|1Z48|A Chain A, Crystal Structure Of Reduced Yqjm From Bacillus Subtilis
pdb|1Z48|B Chain B, Crystal Structure Of Reduced Yqjm From Bacillus Subtilis
Length = 338
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 6/129 (4%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMRSYDY---IPQPHAILYYSQRTTEGGFLISEASVVS 81
L TP + L +RIV +P S++ + H Y S+ + G +I EAS V+
Sbjct: 5 LFTPITIKDXTLKNRIVXSPXCXYSSHEKDGKLTPFHXAHYISRAIGQVGLIIVEASAVN 64
Query: 82 ETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRD---FQPNGKAP 138
GR GIW+ E +E + + +V+ +G QL HAGR + + F P+ A
Sbjct: 65 PQGRITDQDLGIWSDEHIEGFAKLTEQVKEQGSKIGIQLAHAGRKAELEGDIFAPSAIAF 124
Query: 139 ISYSDKPLK 147
S P++
Sbjct: 125 DEQSATPVE 133
>pdb|2H8X|A Chain A, Xenobiotic Reductase A-Oxidized
Length = 358
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 4/157 (2%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMRSYD-YIPQPHAILYYSQRTTEGGFLISEASVVSET 83
L PY + L +RI + P+ + + D I H + G L+ EA+ V+
Sbjct: 2 LFEPYTLKDVTLRNRIAIPPMCQYMAEDGMINDWHHVHLAGLARGGAGLLVVEATAVAPE 61
Query: 84 GRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSD 143
GR GIW+ +A+ P+V ++A G + Q+ HAGR ++ + G I+ D
Sbjct: 62 GRITPGCAGIWSDAHAQAFVPVVQAIKAAGSVPGIQIAHAGRKASANRPWEGDDHIAADD 121
Query: 144 KPLKN--QPNG-GFNAAEFTPPRRLRTGEIPQIVNDF 177
P+ F A PR + +I ++ DF
Sbjct: 122 TRGWETIAPSAIAFGAHLPKVPREMTLDDIARVKQDF 158
>pdb|3N16|A Chain A, Xena - Y183f
Length = 363
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 4/157 (2%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMRSYD-YIPQPHAILYYSQRTTEGGFLISEASVVSET 83
L PY + L +RI + P+ + + D I H + G L+ EA+ V+
Sbjct: 4 LFEPYTLKDVTLRNRIAIPPMCQYMAEDGMINDWHHVHLAGLARGGAGLLVVEATAVAPE 63
Query: 84 GRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSD 143
GR GIW+ +A+ P+V ++A G + Q+ HAGR ++ + G I+ D
Sbjct: 64 GRITPGCAGIWSDAHAQAFVPVVQAIKAAGSVPGIQIAHAGRKASANRPWEGDDHIAADD 123
Query: 144 KPLKN--QPNG-GFNAAEFTPPRRLRTGEIPQIVNDF 177
P+ F A PR + +I ++ DF
Sbjct: 124 TRGWETIAPSAIAFGAHLPKVPREMTLDDIARVKQDF 160
>pdb|3L5L|A Chain A, Xenobiotic Reductase A - Oxidized
pdb|3L5M|A Chain A, Xenobiotic Reductase A - Coumarin Bound
pdb|3N19|B Chain B, Xena - Reduced
pdb|3N19|D Chain D, Xena - Reduced
Length = 363
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 4/157 (2%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMRSYD-YIPQPHAILYYSQRTTEGGFLISEASVVSET 83
L PY + L +RI + P+ + + D I H + G L+ EA+ V+
Sbjct: 4 LFEPYTLKDVTLRNRIAIPPMCQYMAEDGMINDWHHVHLAGLARGGAGLLVVEATAVAPE 63
Query: 84 GRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSD 143
GR GIW+ +A+ P+V ++A G + Q+ HAGR ++ + G I+ D
Sbjct: 64 GRITPGCAGIWSDAHAQAFVPVVQAIKAAGSVPGIQIAHAGRKASANRPWEGDDHIAADD 123
Query: 144 KPLKN--QPNG-GFNAAEFTPPRRLRTGEIPQIVNDF 177
P+ F A PR + +I ++ DF
Sbjct: 124 TRGWETIAPSAIAFGAHLPKVPREMTLDDIARVKQDF 160
>pdb|3N14|A Chain A, Xena - W358a
Length = 363
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 4/157 (2%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMRSYD-YIPQPHAILYYSQRTTEGGFLISEASVVSET 83
L PY + L +RI + P+ + + D I H + G L+ EA+ V+
Sbjct: 4 LFEPYTLKDVTLRNRIAIPPMCQYMAEDGMINDWHHVHLAGLARGGAGLLVVEATAVAPE 63
Query: 84 GRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSD 143
GR GIW+ +A+ P+V ++A G + Q+ HAGR ++ + G I+ D
Sbjct: 64 GRITPGCAGIWSDAHAQAFVPVVQAIKAAGSVPGIQIAHAGRKASANRPWEGDDHIAADD 123
Query: 144 KPLKN--QPNG-GFNAAEFTPPRRLRTGEIPQIVNDF 177
P+ F A PR + +I ++ DF
Sbjct: 124 TRGWETIAPSAIAFGAHLPKVPREMTLDDIARVKQDF 160
>pdb|2H8Z|A Chain A, Xenobiotic Reductase A In Complex With 8-Hydroxycoumarin
pdb|2H90|A Chain A, Xenobiotic Reductase A In Complex With Coumarin
Length = 359
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 4/157 (2%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMRSYD-YIPQPHAILYYSQRTTEGGFLISEASVVSET 83
L PY + L +RI + P+ + + D I H + G L+ EA+ V+
Sbjct: 3 LFEPYTLKDVTLRNRIAIPPMCQYMAEDGMINDWHHVHLAGLARGGAGLLVVEATAVAPE 62
Query: 84 GRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSD 143
GR GIW+ +A+ P+V ++A G + Q+ HAGR ++ + G I+ D
Sbjct: 63 GRITPGCAGIWSDAHAQAFVPVVQAIKAAGSVPGIQIAHAGRKASANRPWEGDDHIAADD 122
Query: 144 KPLKN--QPNG-GFNAAEFTPPRRLRTGEIPQIVNDF 177
P+ F A PR + +I ++ DF
Sbjct: 123 TRGWETIAPSAIAFGAHLPKVPREMTLDDIARVKQDF 159
>pdb|3GR7|A Chain A, Structure Of Oye From Geobacillus Kaustophilus, Hexagonal
Crystal Form
pdb|3GR7|B Chain B, Structure Of Oye From Geobacillus Kaustophilus, Hexagonal
Crystal Form
pdb|3GR8|A Chain A, Structure Of Oye From Geobacillus Kaustophilus,
Orthorhombic Crystal Form
pdb|3GR8|B Chain B, Structure Of Oye From Geobacillus Kaustophilus,
Orthorhombic Crystal Form
Length = 340
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMRSYD----YIPQPHAILYYSQRTTEGGFLISEASVV 80
L +PY + L +RIV++P+ M S D + H I Y ++ + G +I EA+ V
Sbjct: 5 LFSPYTIRGLTLKNRIVMSPMC-MYSCDTKDGAVRTWHKIHYPARAVGQVGLIIVEATGV 63
Query: 81 SETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRIS 127
+ GR + GIW+ + + + +V V+ G QL HAGR S
Sbjct: 64 TPQGRISERDLGIWSDDHIAGLRELVGLVKEHGAAIGIQLAHAGRKS 110
>pdb|3HF3|A Chain A, Old Yellow Enzyme From Thermus Scotoductus Sa-01
pdb|3HF3|B Chain B, Old Yellow Enzyme From Thermus Scotoductus Sa-01
pdb|3HF3|C Chain C, Old Yellow Enzyme From Thermus Scotoductus Sa-01
pdb|3HF3|D Chain D, Old Yellow Enzyme From Thermus Scotoductus Sa-01
pdb|3HGJ|A Chain A, Old Yellow Enzyme From Thermus Scotoductus Sa-01 Complexed
With P-Hydroxy-Benzaldehyde
pdb|3HGJ|B Chain B, Old Yellow Enzyme From Thermus Scotoductus Sa-01 Complexed
With P-Hydroxy-Benzaldehyde
pdb|3HGJ|C Chain C, Old Yellow Enzyme From Thermus Scotoductus Sa-01 Complexed
With P-Hydroxy-Benzaldehyde
pdb|3HGJ|D Chain D, Old Yellow Enzyme From Thermus Scotoductus Sa-01 Complexed
With P-Hydroxy-Benzaldehyde
Length = 349
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Query: 25 LLTPYKMGSFNLSHRIVLAPLSRMRSY--DYIPQPHAILYYSQRTTEG-GFLISEASVVS 81
L TP ++G L +R+ ++P+ + + + H +L+Y R G G ++ EA+ V
Sbjct: 4 LFTPLELGGLRLKNRLAMSPMCQYSATLEGEVTDWH-LLHYPTRALGGVGLILVEATAVE 62
Query: 82 ETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISY 141
GR + GIW+++ + K + ++ G + QL HAGR + G P+ +
Sbjct: 63 PLGRISPYDLGIWSEDHLPGLKELARRIREAGAVPGIQLAHAGRKAGTARPWEGGKPLGW 122
>pdb|1PS9|A Chain A, The Crystal Structure And Reaction Mechanism Of E. Coli
2,4- Dienoyl Coa Reductase
Length = 671
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 18/155 (11%)
Query: 25 LLTPYKMGSFNLSHRIVLAPL-SRMRSYDYIPQPHAILYYSQRTTEGGFLISEASVVSE- 82
L P +G L +R+++ + + + Y + A +Y++R G LI + +
Sbjct: 5 LFAPLDLGFTTLKNRVLMGSMHTGLEEYPDGAERLAA-FYAERARHGVALIVSGGIAPDL 63
Query: 83 TGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYS 142
TG G + + Q+ + I V +GG Q+LH GR S +QP+ AP S
Sbjct: 64 TGVGMEGGAMLNDASQIPHHRTITEAVHQEGGKIALQILHTGRYS---YQPHLVAP-SAL 119
Query: 143 DKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDF 177
P+ F P L EI Q++++F
Sbjct: 120 QAPIN----------RFV-PHELSHEEILQLIDNF 143
>pdb|3L5A|A Chain A, Crystal Structure Of A Probable Nadh-Dependent Flavin
Oxidoreductase From Staphylococcus Aureus
Length = 419
Score = 33.5 bits (75), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 24 PLLTPYKM-GSFNLSHRIVLAPLSRMRSYD--YIPQPHAILYYSQRTTEGGFLISEASVV 80
PLL + +S+R VL+P + S YI + + Y ++R+ G ++ A+ +
Sbjct: 26 PLLQSIHLPNGIKISNRFVLSPXTVNASTKEGYITKAD-LAYAARRSNSAGXQVTGAAYI 84
Query: 81 SETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGK 136
G+ +++ I + + + G + QL HAGR SN+ GK
Sbjct: 85 EPYGKLFEYGFNIDHDACIPGLTNXASTXKQHGSLAIIQLAHAGRFSNQAILNFGK 140
>pdb|1NF3|C Chain C, Structure Of Cdc42 In A Complex With The Gtpase-Binding
Domain Of The Cell Polarity Protein, Par6
pdb|1NF3|D Chain D, Structure Of Cdc42 In A Complex With The Gtpase-Binding
Domain Of The Cell Polarity Protein, Par6
Length = 128
Score = 30.0 bits (66), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 44 PLSRMRSYDYIPQPHAILYYSQRTTEG--GFLISEASVVSETGRGYKHTPGIWTKEQV 99
P+S + D +P+ H + + TE GF I + S V T G + PGI+ V
Sbjct: 16 PVSSIIDVDILPETHRRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLV 73
>pdb|1HKU|A Chain A, CtbpBARS: A DUAL-Function Protein Involved In
Transcription Corepression And Golgi Membrane Fission
Length = 358
Score = 30.0 bits (66), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Query: 111 AKGGIF----FCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPN 151
A+GG+ Q L GRI + P S+S PLK+ PN
Sbjct: 262 ARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPN 306
>pdb|3GA0|A Chain A, Ctbp1BARS GLY172->glu Mutant Structure: Impairing Nad(H)
Binding And Dimerization
Length = 358
Score = 30.0 bits (66), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Query: 111 AKGGIF----FCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPN 151
A+GG+ Q L GRI + P S+S PLK+ PN
Sbjct: 262 ARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPN 306
>pdb|1HL3|A Chain A, CtbpBARS IN TERNARY COMPLEX WITH NAD(H) AND PIDLSKK
PEPTIDE
pdb|2HU2|A Chain A, CtbpBARS IN TERNARY COMPLEX WITH NAD(H) AND RRTGAPPAL
Peptide
Length = 358
Score = 30.0 bits (66), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Query: 111 AKGGIF----FCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPN 151
A+GG+ Q L GRI + P S+S PLK+ PN
Sbjct: 262 ARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPN 306
>pdb|1MX3|A Chain A, Crystal Structure Of Ctbp Dehydrogenase Core Holo Form
Length = 347
Score = 30.0 bits (66), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Query: 111 AKGGIF----FCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPN 151
A+GG+ Q L GRI + P S+S PLK+ PN
Sbjct: 259 ARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPN 303
>pdb|2OME|A Chain A, Crystal Structure Of Human Ctbp2 Dehydrogenase Complexed
With Nad(H)
pdb|2OME|B Chain B, Crystal Structure Of Human Ctbp2 Dehydrogenase Complexed
With Nad(H)
pdb|2OME|C Chain C, Crystal Structure Of Human Ctbp2 Dehydrogenase Complexed
With Nad(H)
pdb|2OME|D Chain D, Crystal Structure Of Human Ctbp2 Dehydrogenase Complexed
With Nad(H)
pdb|2OME|E Chain E, Crystal Structure Of Human Ctbp2 Dehydrogenase Complexed
With Nad(H)
pdb|2OME|F Chain F, Crystal Structure Of Human Ctbp2 Dehydrogenase Complexed
With Nad(H)
pdb|2OME|G Chain G, Crystal Structure Of Human Ctbp2 Dehydrogenase Complexed
With Nad(H)
pdb|2OME|H Chain H, Crystal Structure Of Human Ctbp2 Dehydrogenase Complexed
With Nad(H)
Length = 336
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 30/81 (37%), Gaps = 19/81 (23%)
Query: 111 AKGGIF----FCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPN--------------- 151
A+GG+ Q L GRI + P S++ PLK+ PN
Sbjct: 243 ARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFAQGPLKDAPNLICTPHTAWYSEQAS 302
Query: 152 GGFNAAEFTPPRRLRTGEIPQ 172
A T RR TG IP+
Sbjct: 303 LEMREAAATEIRRAITGRIPE 323
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.135 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,197,092
Number of Sequences: 62578
Number of extensions: 251362
Number of successful extensions: 545
Number of sequences better than 100.0: 59
Number of HSP's better than 100.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 439
Number of HSP's gapped (non-prelim): 63
length of query: 205
length of database: 14,973,337
effective HSP length: 94
effective length of query: 111
effective length of database: 9,091,005
effective search space: 1009101555
effective search space used: 1009101555
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 49 (23.5 bits)