Query 037727
Match_columns 205
No_of_seqs 204 out of 1064
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 05:50:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037727.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037727hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kru_A NADH:flavin oxidoreduct 100.0 7.7E-56 2.6E-60 387.0 18.5 170 23-205 2-176 (343)
2 3gr7_A NADPH dehydrogenase; fl 100.0 7.5E-56 2.5E-60 386.9 18.1 170 22-205 2-177 (340)
3 3hgj_A Chromate reductase; TIM 100.0 2.3E-55 7.8E-60 385.0 17.8 174 23-205 2-185 (349)
4 3l5l_A Xenobiotic reductase A; 100.0 4.2E-55 1.4E-59 385.1 18.5 175 23-205 2-191 (363)
5 4a3u_A NCR, NADH\:flavin oxido 100.0 9.3E-56 3.2E-60 388.7 13.4 181 22-205 1-185 (358)
6 4gbu_A NADPH dehydrogenase 1; 100.0 1.5E-55 5.1E-60 392.4 10.0 186 20-205 12-205 (400)
7 4ab4_A Xenobiotic reductase B; 100.0 4.5E-54 1.5E-58 378.1 19.1 181 23-205 2-186 (362)
8 3gka_A N-ethylmaleimide reduct 100.0 4.6E-54 1.6E-58 377.9 18.6 182 22-205 9-194 (361)
9 3tjl_A NADPH dehydrogenase; OL 100.0 9.8E-55 3.4E-59 386.4 13.9 186 19-205 8-201 (407)
10 3l5a_A NADH/flavin oxidoreduct 100.0 1.5E-54 5E-59 387.7 9.9 174 22-205 24-203 (419)
11 3aty_A Tcoye, prostaglandin F2 100.0 4.2E-52 1.4E-56 367.8 17.7 184 21-205 3-208 (379)
12 2hsa_B 12-oxophytodienoate red 100.0 5.4E-52 1.8E-56 369.6 18.0 184 21-205 14-204 (402)
13 1icp_A OPR1, 12-oxophytodienoa 100.0 5.8E-52 2E-56 366.6 15.8 187 17-205 8-200 (376)
14 1z41_A YQJM, probable NADH-dep 100.0 4.3E-51 1.5E-55 356.4 18.2 171 21-205 1-177 (338)
15 2r14_A Morphinone reductase; H 100.0 6.9E-51 2.4E-55 359.8 16.8 185 20-205 6-199 (377)
16 1vyr_A Pentaerythritol tetrani 100.0 5.3E-50 1.8E-54 352.8 17.4 183 22-205 2-194 (364)
17 2gou_A Oxidoreductase, FMN-bin 100.0 1.1E-49 3.9E-54 350.8 16.0 182 22-205 2-194 (365)
18 1ps9_A 2,4-dienoyl-COA reducta 100.0 5.4E-47 1.9E-51 355.5 17.8 169 22-205 2-174 (671)
19 1o94_A Tmadh, trimethylamine d 100.0 8.4E-47 2.9E-51 357.6 17.1 174 20-205 4-182 (729)
20 3k30_A Histamine dehydrogenase 100.0 5.1E-46 1.7E-50 350.0 17.6 177 18-205 7-190 (690)
21 1vhn_A Putative flavin oxidore 98.9 3E-10 1E-14 97.6 3.2 86 34-192 1-87 (318)
22 3b0p_A TRNA-dihydrouridine syn 98.9 4.6E-10 1.6E-14 97.8 4.2 86 35-192 1-87 (350)
23 1f76_A Dihydroorotate dehydrog 98.9 1.4E-09 4.9E-14 93.8 6.9 112 28-192 46-169 (336)
24 1jub_A Dihydroorotate dehydrog 98.1 1.2E-05 4.1E-10 68.2 9.8 46 28-82 3-49 (311)
25 1ep3_A Dihydroorotate dehydrog 98.1 4.1E-06 1.4E-10 70.8 6.9 106 28-192 8-129 (311)
26 1tv5_A Dhodehase, dihydroorota 98.0 1.3E-06 4.4E-11 78.3 2.2 75 28-112 83-167 (443)
27 2e6f_A Dihydroorotate dehydrog 98.0 9.9E-06 3.4E-10 68.8 7.6 46 28-82 5-51 (314)
28 3oix_A Putative dihydroorotate 95.9 0.066 2.3E-06 46.2 10.6 46 28-82 39-85 (345)
29 4ef8_A Dihydroorotate dehydrog 94.2 0.25 8.4E-06 42.7 9.4 46 28-82 38-84 (354)
30 1gte_A Dihydropyrimidine dehyd 92.7 0.43 1.5E-05 46.5 9.3 44 29-81 535-579 (1025)
31 1kbi_A Cytochrome B2, L-LCR; f 92.2 1.8 6.1E-05 39.1 12.1 165 25-197 177-375 (511)
32 2nli_A Lactate oxidase; flavoe 91.7 0.78 2.7E-05 39.6 8.8 158 24-197 67-261 (368)
33 4dpp_A DHDPS 2, dihydrodipicol 85.8 4.9 0.00017 34.6 9.6 70 41-120 63-135 (360)
34 2o56_A Putative mandelate race 83.6 0.67 2.3E-05 40.2 3.2 29 174-205 153-188 (407)
35 2gl5_A Putative dehydratase pr 83.0 0.73 2.5E-05 40.0 3.2 25 174-198 151-182 (410)
36 3i65_A Dihydroorotate dehydrog 82.7 9.1 0.00031 33.6 10.0 46 27-82 84-130 (415)
37 2ox4_A Putative mandelate race 82.4 0.83 2.8E-05 39.6 3.3 28 175-205 148-182 (403)
38 3zwt_A Dihydroorotate dehydrog 81.7 2.5 8.4E-05 36.5 6.0 51 28-88 51-103 (367)
39 1xky_A Dihydrodipicolinate syn 81.2 8.9 0.0003 31.9 9.1 70 42-121 17-89 (301)
40 3dz1_A Dihydrodipicolinate syn 81.2 6.7 0.00023 32.8 8.4 71 41-122 12-85 (313)
41 3fkr_A L-2-keto-3-deoxyarabona 81.1 11 0.00037 31.5 9.7 72 41-122 12-86 (309)
42 2wkj_A N-acetylneuraminate lya 80.8 9.2 0.00032 31.8 9.1 70 43-122 17-89 (303)
43 3a5f_A Dihydrodipicolinate syn 80.4 8.3 0.00029 31.8 8.7 69 41-120 6-77 (291)
44 2z6i_A Trans-2-enoyl-ACP reduc 79.5 10 0.00035 31.8 9.0 16 177-192 77-92 (332)
45 1m5w_A Pyridoxal phosphate bio 78.7 13 0.00043 30.3 8.8 123 52-197 72-195 (243)
46 1f6k_A N-acetylneuraminate lya 78.3 11 0.00038 31.1 8.8 72 41-122 7-82 (293)
47 2poz_A Putative dehydratase; o 78.2 0.91 3.1E-05 39.2 2.1 26 175-200 139-167 (392)
48 3cpr_A Dihydrodipicolinate syn 77.8 16 0.00055 30.3 9.7 71 42-122 21-94 (304)
49 2v9d_A YAGE; dihydrodipicolini 77.5 12 0.00041 31.8 8.9 71 41-121 35-108 (343)
50 2r8w_A AGR_C_1641P; APC7498, d 76.3 12 0.00043 31.5 8.6 72 41-122 38-112 (332)
51 3flu_A DHDPS, dihydrodipicolin 75.3 16 0.00056 30.1 9.0 71 42-122 12-85 (297)
52 3p3b_A Mandelate racemase/muco 74.4 1.6 5.6E-05 37.7 2.7 27 172-198 147-176 (392)
53 3l21_A DHDPS, dihydrodipicolin 74.2 18 0.00063 30.0 9.1 70 42-121 20-92 (304)
54 2yxg_A DHDPS, dihydrodipicolin 73.9 13 0.00045 30.5 8.1 70 42-122 6-78 (289)
55 3gk0_A PNP synthase, pyridoxin 73.5 14 0.00047 30.6 7.8 123 52-197 100-223 (278)
56 3tak_A DHDPS, dihydrodipicolin 73.3 14 0.00049 30.3 8.2 70 42-121 6-78 (291)
57 3m5v_A DHDPS, dihydrodipicolin 72.5 11 0.00038 31.2 7.3 70 43-122 14-86 (301)
58 3s5o_A 4-hydroxy-2-oxoglutarat 72.5 16 0.00054 30.4 8.2 70 41-120 18-90 (307)
59 3si9_A DHDPS, dihydrodipicolin 72.5 16 0.00056 30.5 8.4 69 43-121 28-99 (315)
60 3d0c_A Dihydrodipicolinate syn 72.1 12 0.00043 31.2 7.6 72 41-122 15-90 (314)
61 3tjx_A Dihydroorotate dehydrog 71.8 9.3 0.00032 32.3 6.8 45 28-81 38-83 (354)
62 3b4u_A Dihydrodipicolinate syn 71.7 10 0.00035 31.3 6.9 72 41-122 7-81 (294)
63 1xm3_A Thiazole biosynthesis p 71.3 4.5 0.00015 33.0 4.5 42 27-77 2-44 (264)
64 3na8_A Putative dihydrodipicol 71.3 16 0.00053 30.6 8.0 71 41-121 28-101 (315)
65 2ibg_E Protein hedgehog, GH039 71.2 2 6.9E-05 32.5 2.1 28 89-116 55-84 (150)
66 1o5k_A DHDPS, dihydrodipicolin 70.9 13 0.00045 30.9 7.4 68 43-121 19-89 (306)
67 2ehh_A DHDPS, dihydrodipicolin 70.3 18 0.00062 29.8 8.1 70 42-122 6-78 (294)
68 2rfg_A Dihydrodipicolinate syn 70.2 10 0.00035 31.4 6.6 70 42-122 6-78 (297)
69 3qfe_A Putative dihydrodipicol 69.9 17 0.00057 30.5 7.9 70 42-121 15-88 (318)
70 3eb2_A Putative dihydrodipicol 67.9 19 0.00064 29.8 7.7 71 41-121 8-81 (300)
71 1vcv_A Probable deoxyribose-ph 66.3 6.1 0.00021 31.8 4.2 20 178-197 131-151 (226)
72 2vc6_A MOSA, dihydrodipicolina 66.2 12 0.00041 30.8 6.2 70 42-122 6-78 (292)
73 3qze_A DHDPS, dihydrodipicolin 65.0 33 0.0011 28.5 8.7 71 41-121 27-100 (314)
74 2nuw_A 2-keto-3-deoxygluconate 63.6 12 0.00042 30.8 5.7 68 42-122 4-74 (288)
75 3k7i_B IHH, HHG-2, indian hedg 62.8 3.8 0.00013 31.9 2.2 24 89-112 83-106 (187)
76 2r91_A 2-keto-3-deoxy-(6-phosp 62.0 17 0.00058 29.8 6.3 66 42-121 4-72 (286)
77 3ixl_A Amdase, arylmalonate de 61.0 5.3 0.00018 32.1 2.9 30 163-192 41-70 (240)
78 3daq_A DHDPS, dihydrodipicolin 58.9 35 0.0012 28.0 7.7 68 43-121 9-79 (292)
79 3k67_A Putative dehydratase AF 57.5 2.8 9.5E-05 31.7 0.6 44 161-204 44-93 (159)
80 1rvk_A Isomerase/lactonizing e 56.7 6.3 0.00022 33.6 2.8 24 174-197 150-176 (382)
81 3glc_A Aldolase LSRF; TIM barr 56.1 21 0.0007 29.8 5.8 24 96-119 154-177 (295)
82 2qjg_A Putative aldolase MJ040 56.0 35 0.0012 27.2 7.1 24 96-119 128-151 (273)
83 3vgf_A Malto-oligosyltrehalose 55.5 13 0.00043 33.6 4.7 29 99-127 167-197 (558)
84 1ypf_A GMP reductase; GUAC, pu 54.9 29 0.00098 29.1 6.6 20 28-47 37-56 (336)
85 3tva_A Xylose isomerase domain 54.4 40 0.0014 26.7 7.2 59 96-192 98-156 (290)
86 1w8s_A FBP aldolase, fructose- 54.0 40 0.0014 27.2 7.2 25 95-119 120-144 (263)
87 3obe_A Sugar phosphate isomera 52.7 50 0.0017 26.7 7.7 58 96-192 110-167 (305)
88 1sf9_A YFHH hypothetical prote 52.6 16 0.00054 26.6 3.9 38 163-200 30-76 (128)
89 3dx5_A Uncharacterized protein 51.9 59 0.002 25.5 7.9 61 96-192 80-140 (286)
90 3vni_A Xylose isomerase domain 51.7 62 0.0021 25.5 8.0 65 97-192 85-149 (294)
91 2og9_A Mandelate racemase/muco 51.7 8.6 0.00029 33.0 2.8 23 174-196 163-188 (393)
92 2hmc_A AGR_L_411P, dihydrodipi 50.6 95 0.0033 26.1 9.3 38 41-78 30-70 (344)
93 2xed_A Putative maleate isomer 50.5 8 0.00027 31.6 2.4 29 164-192 66-94 (273)
94 2yxy_A Hypothetical conserved 49.4 17 0.00058 26.0 3.6 38 163-200 12-58 (115)
95 1p4c_A L(+)-mandelate dehydrog 48.6 25 0.00086 30.1 5.3 87 24-117 59-153 (380)
96 1gox_A (S)-2-hydroxy-acid oxid 48.5 60 0.0021 27.5 7.7 89 24-117 58-153 (370)
97 3o6c_A PNP synthase, pyridoxin 48.0 6.8 0.00023 32.2 1.5 28 170-197 188-215 (260)
98 3bdk_A D-mannonate dehydratase 47.9 53 0.0018 28.3 7.3 59 56-118 62-122 (386)
99 2hk0_A D-psicose 3-epimerase; 46.9 72 0.0025 25.5 7.7 64 97-192 104-168 (309)
100 1fob_A Beta-1,4-galactanase; B 46.4 1.2E+02 0.0042 25.1 9.3 70 99-192 59-131 (334)
101 2rdx_A Mandelate racemase/muco 45.9 11 0.00039 32.0 2.7 18 175-192 147-164 (379)
102 1k77_A EC1530, hypothetical pr 45.5 67 0.0023 24.7 7.2 61 96-192 81-141 (260)
103 1hvx_A Alpha-amylase; hydrolas 45.0 55 0.0019 28.8 7.2 27 99-125 81-109 (515)
104 1mdl_A Mandelate racemase; iso 44.0 14 0.00048 31.1 3.0 22 175-196 146-170 (359)
105 2nzl_A Hydroxyacid oxidase 1; 43.7 27 0.00092 30.2 4.8 91 24-117 81-177 (392)
106 4ffu_A Oxidase; structural gen 43.2 9.2 0.00032 29.1 1.5 41 162-202 44-90 (176)
107 3sgz_A Hydroxyacid oxidase 2; 42.8 21 0.00073 30.5 3.9 34 164-197 203-249 (352)
108 2pgw_A Muconate cycloisomerase 42.7 14 0.00047 31.6 2.7 19 174-192 148-166 (384)
109 3cqj_A L-ribulose-5-phosphate 42.3 1.1E+02 0.0037 24.1 8.1 60 97-192 105-164 (295)
110 3qc0_A Sugar isomerase; TIM ba 41.3 90 0.0031 24.1 7.3 61 97-192 80-140 (275)
111 2ovl_A Putative racemase; stru 41.3 16 0.00054 31.0 2.9 22 175-196 148-172 (371)
112 3ngf_A AP endonuclease, family 40.8 90 0.0031 24.4 7.3 60 96-192 89-148 (269)
113 2gdq_A YITF; mandelate racemas 40.7 15 0.00051 31.4 2.6 22 175-196 141-165 (382)
114 2jep_A Xyloglucanase; family 5 40.3 32 0.0011 29.0 4.7 33 93-125 103-135 (395)
115 2oz8_A MLL7089 protein; struct 39.8 18 0.0006 31.0 3.0 23 175-197 147-172 (389)
116 3ndz_A Endoglucanase D; cellot 39.4 45 0.0015 27.8 5.4 69 52-125 40-108 (345)
117 2nql_A AGR_PAT_674P, isomerase 39.2 17 0.00057 31.1 2.7 19 174-192 165-183 (388)
118 2b3n_A Hypothetical protein AF 39.0 16 0.00054 27.3 2.2 41 162-202 45-91 (159)
119 2qgy_A Enolase from the enviro 38.8 16 0.00056 31.2 2.6 19 174-192 150-168 (391)
120 1i60_A IOLI protein; beta barr 37.7 1.2E+02 0.0042 23.3 7.6 59 97-192 81-140 (278)
121 1iq6_A (R)-hydratase, (R)-spec 37.6 7.2 0.00024 27.4 0.1 41 162-202 15-61 (134)
122 2wc7_A Alpha amylase, catalyti 37.2 27 0.00093 30.5 3.8 28 99-126 102-131 (488)
123 3l23_A Sugar phosphate isomera 36.9 1.4E+02 0.0047 23.9 8.0 58 96-192 104-163 (303)
124 4gqr_A Pancreatic alpha-amylas 36.5 22 0.00075 30.5 3.1 28 99-126 76-105 (496)
125 3apg_A Beta-glucosidase; TIM b 36.4 90 0.0031 27.7 7.1 30 96-125 125-154 (473)
126 1h1n_A Endo type cellulase ENG 36.3 39 0.0013 27.4 4.5 33 93-125 65-97 (305)
127 3o0f_A Putative metal-dependen 35.7 72 0.0025 26.4 6.0 26 99-126 182-207 (301)
128 3exz_A MAOC-like dehydratase; 35.6 12 0.00041 27.5 1.0 41 162-203 18-64 (154)
129 1to3_A Putative aldolase YIHT; 35.4 69 0.0024 26.5 5.9 26 96-121 138-163 (304)
130 3oa3_A Aldolase; structural ge 35.2 26 0.00089 29.2 3.1 27 164-197 184-211 (288)
131 2ojp_A DHDPS, dihydrodipicolin 34.9 63 0.0022 26.4 5.5 71 42-122 6-79 (292)
132 4aio_A Limit dextrinase; hydro 34.5 62 0.0021 30.2 6.0 52 71-127 355-408 (884)
133 2zds_A Putative DNA-binding pr 34.3 88 0.003 25.1 6.4 70 97-192 108-177 (340)
134 1mli_A Muconolactone isomerase 33.4 52 0.0018 22.8 3.9 30 160-189 10-39 (96)
135 2hzg_A Mandelate racemase/muco 32.9 24 0.00082 30.2 2.7 18 175-192 147-164 (401)
136 3qxb_A Putative xylose isomera 32.8 44 0.0015 27.0 4.2 65 97-192 111-176 (316)
137 3icg_A Endoglucanase D; cellul 32.3 66 0.0022 28.4 5.6 69 52-125 43-111 (515)
138 2qdd_A Mandelate racemase/muco 31.7 27 0.00093 29.6 2.8 22 175-196 147-171 (378)
139 3stp_A Galactonate dehydratase 31.4 26 0.00088 30.4 2.6 23 174-196 180-205 (412)
140 1g94_A Alpha-amylase; beta-alp 31.4 32 0.0011 29.8 3.2 29 99-127 64-94 (448)
141 3qr3_A Endoglucanase EG-II; TI 31.2 52 0.0018 27.6 4.5 33 93-125 77-109 (340)
142 3n1g_B Desert hedgehog protein 31.1 25 0.00084 27.0 2.2 27 89-115 75-103 (170)
143 2pp0_A L-talarate/galactarate 31.0 26 0.00089 30.0 2.6 19 174-192 176-194 (398)
144 2eo2_A Adult MALE hypothalamus 30.9 41 0.0014 21.9 2.9 16 160-175 45-60 (71)
145 1p0k_A Isopentenyl-diphosphate 30.5 25 0.00084 29.5 2.3 21 27-47 45-65 (349)
146 2ps2_A Putative mandelate race 30.3 25 0.00087 29.6 2.4 19 174-192 147-165 (371)
147 3nco_A Endoglucanase fncel5A; 29.5 69 0.0024 26.0 4.9 68 52-124 39-106 (320)
148 1ud2_A Amylase, alpha-amylase; 29.5 35 0.0012 29.7 3.2 27 99-125 80-108 (480)
149 3edf_A FSPCMD, cyclomaltodextr 29.4 44 0.0015 30.2 3.9 29 99-127 198-228 (601)
150 3u0h_A Xylose isomerase domain 29.4 1.5E+02 0.0051 22.9 6.8 59 97-192 81-139 (281)
151 1lwj_A 4-alpha-glucanotransfer 29.2 36 0.0012 29.2 3.2 28 99-126 69-98 (441)
152 2qq6_A Mandelate racemase/muco 29.2 30 0.001 29.7 2.7 25 174-198 150-179 (410)
153 1q6w_A Monoamine oxidase regul 29.1 13 0.00044 27.3 0.3 41 162-202 28-74 (161)
154 3gk0_A PNP synthase, pyridoxin 29.0 25 0.00086 29.1 2.0 26 167-192 38-70 (278)
155 2qde_A Mandelate racemase/muco 28.8 28 0.00097 29.7 2.4 18 175-192 147-164 (397)
156 3bh4_A Alpha-amylase; calcium, 28.8 37 0.0013 29.6 3.2 27 99-125 78-106 (483)
157 1xla_A D-xylose isomerase; iso 28.7 1.4E+02 0.0047 25.2 6.8 62 97-190 113-174 (394)
158 1tzz_A Hypothetical protein L1 28.7 31 0.001 29.4 2.6 24 174-197 166-192 (392)
159 2bhu_A Maltooligosyltrehalose 28.5 47 0.0016 30.2 4.0 28 99-126 192-221 (602)
160 1sjd_A N-acylamino acid racema 28.2 31 0.0011 29.0 2.5 18 175-192 143-160 (368)
161 1wpc_A Glucan 1,4-alpha-maltoh 28.1 39 0.0013 29.5 3.2 27 99-125 82-110 (485)
162 4aie_A Glucan 1,6-alpha-glucos 28.1 38 0.0013 29.6 3.2 28 99-126 79-108 (549)
163 1ht6_A AMY1, alpha-amylase iso 28.1 40 0.0014 28.7 3.2 29 99-127 68-98 (405)
164 1mxg_A Alpha amylase; hyperthe 28.0 39 0.0013 29.1 3.2 28 99-126 86-115 (435)
165 3ctl_A D-allulose-6-phosphate 27.9 2.2E+02 0.0075 22.3 8.2 20 102-121 95-114 (231)
166 3bjs_A Mandelate racemase/muco 27.8 31 0.0011 29.9 2.5 18 175-192 187-204 (428)
167 1jae_A Alpha-amylase; glycosid 27.3 41 0.0014 29.3 3.2 28 99-126 74-103 (471)
168 3l55_A B-1,4-endoglucanase/cel 27.3 56 0.0019 27.5 4.0 30 94-123 85-114 (353)
169 2guy_A Alpha-amylase A; (beta- 27.2 41 0.0014 29.2 3.2 28 99-126 97-126 (478)
170 3inp_A D-ribulose-phosphate 3- 27.2 2.1E+02 0.0073 22.8 7.3 22 101-122 122-143 (246)
171 1gcy_A Glucan 1,4-alpha-maltot 26.4 43 0.0015 29.7 3.2 29 99-127 92-122 (527)
172 1l8n_A Alpha-D-glucuronidase; 26.2 1.2E+02 0.0039 28.4 6.0 61 57-123 178-239 (679)
173 2lky_A Uncharacterized protein 25.9 50 0.0017 23.5 2.9 19 162-180 38-56 (112)
174 1ua7_A Alpha-amylase; beta-alp 25.7 43 0.0015 28.7 3.0 29 98-126 73-103 (422)
175 2z1k_A (NEO)pullulanase; hydro 25.5 46 0.0016 28.8 3.2 28 99-126 96-125 (475)
176 1itu_A Renal dipeptidase; glyc 25.3 34 0.0012 29.4 2.3 66 99-175 177-242 (369)
177 3h3h_A Uncharacterized snoal-l 25.2 48 0.0017 22.6 2.8 18 164-181 4-21 (122)
178 1wza_A Alpha-amylase A; hydrol 25.1 47 0.0016 28.9 3.2 28 99-126 81-110 (488)
179 2eq5_A 228AA long hypothetical 25.1 1.2E+02 0.004 23.3 5.3 31 166-196 53-85 (228)
180 1ub3_A Aldolase protein; schif 25.1 41 0.0014 26.6 2.6 20 178-197 136-156 (220)
181 2kvc_A Putative uncharacterize 25.0 53 0.0018 23.0 2.8 19 162-180 36-54 (103)
182 3ayv_A Putative uncharacterize 25.0 95 0.0033 23.9 4.8 62 97-192 73-134 (254)
183 3ly0_A Dipeptidase AC. metallo 25.0 32 0.0011 29.6 2.0 65 100-175 192-256 (364)
184 2zad_A Muconate cycloisomerase 25.0 43 0.0015 27.8 2.9 18 175-192 141-158 (345)
185 3ayr_A Endoglucanase; TIM barr 24.9 1.1E+02 0.0039 25.4 5.6 31 94-124 97-127 (376)
186 1gqi_A Alpha-glucuronidase; (a 24.8 1.6E+02 0.0055 27.5 6.8 60 54-123 181-242 (708)
187 3fj0_A Beta-glucosidase; BGLB, 24.8 65 0.0022 28.5 4.1 33 92-124 111-143 (465)
188 2hxt_A L-fuconate dehydratase; 24.6 41 0.0014 29.2 2.7 18 175-192 200-217 (441)
189 2ns6_A Mobilization protein A; 24.4 55 0.0019 25.2 3.1 21 161-181 78-98 (185)
190 1ug6_A Beta-glycosidase; gluco 24.3 67 0.0023 28.0 4.0 33 93-125 90-122 (431)
191 2p8b_A Mandelate racemase/muco 24.2 43 0.0015 28.1 2.7 18 175-192 143-160 (369)
192 1muw_A Xylose isomerase; atomi 24.2 2E+02 0.0068 24.0 7.0 62 97-190 113-174 (386)
193 2dh2_A 4F2 cell-surface antige 23.9 52 0.0018 28.3 3.2 59 65-124 44-108 (424)
194 1nu5_A Chloromuconate cycloiso 23.8 45 0.0015 28.0 2.8 22 175-196 144-169 (370)
195 4e3e_A MAOC domain protein deh 23.7 29 0.00098 29.3 1.5 41 161-201 24-70 (352)
196 2c2i_A RV0130; hotdog, hydrata 23.6 43 0.0015 23.9 2.3 41 162-202 23-69 (151)
197 1rh9_A Endo-beta-mannanase; en 23.5 75 0.0026 26.3 4.1 66 56-122 41-107 (373)
198 2k5e_A Uncharacterized protein 23.5 43 0.0015 21.6 2.0 23 170-192 11-33 (73)
199 1xim_A D-xylose isomerase; iso 23.4 1.7E+02 0.0057 24.6 6.4 62 97-190 113-174 (393)
200 1n7k_A Deoxyribose-phosphate a 23.2 49 0.0017 26.5 2.7 21 177-197 150-171 (234)
201 3tr2_A Orotidine 5'-phosphate 23.2 65 0.0022 25.7 3.5 29 164-192 127-161 (239)
202 3kws_A Putative sugar isomeras 23.2 2.6E+02 0.0091 21.6 8.6 63 97-192 101-163 (287)
203 3lub_A Putative creatinine ami 23.0 2.3E+02 0.0077 22.6 6.8 87 38-124 21-122 (254)
204 3m07_A Putative alpha amylase; 23.0 69 0.0024 29.2 4.0 28 99-126 202-231 (618)
205 1ceo_A Cellulase CELC; glycosy 22.9 84 0.0029 25.6 4.3 31 93-123 62-92 (343)
206 1w3i_A EDA, 2-keto-3-deoxy glu 22.9 73 0.0025 26.0 3.8 68 42-122 4-74 (293)
207 3cny_A Inositol catabolism pro 22.9 2.7E+02 0.0092 21.6 8.8 71 97-192 87-158 (301)
208 2dgd_A 223AA long hypothetical 22.9 39 0.0013 26.1 2.1 30 165-195 44-75 (223)
209 2aaa_A Alpha-amylase; glycosid 22.8 52 0.0018 28.6 3.0 28 99-126 97-126 (484)
210 3aof_A Endoglucanase; glycosyl 22.8 81 0.0028 25.3 4.1 31 94-124 68-98 (317)
211 2bi0_A Hypothetical protein RV 22.5 45 0.0015 28.0 2.5 41 162-202 29-76 (337)
212 1ypf_A GMP reductase; GUAC, pu 22.4 40 0.0014 28.2 2.1 32 165-196 135-180 (336)
213 3vkj_A Isopentenyl-diphosphate 22.4 41 0.0014 28.8 2.2 23 25-47 47-69 (368)
214 3h5d_A DHDPS, dihydrodipicolin 22.4 1.4E+02 0.0047 24.6 5.5 70 43-122 13-85 (311)
215 1bxb_A Xylose isomerase; xylos 22.3 1.6E+02 0.0056 24.6 6.1 63 97-191 113-175 (387)
216 2aam_A Hypothetical protein TM 22.3 58 0.002 27.1 3.1 26 164-192 114-139 (309)
217 2osx_A Endoglycoceramidase II; 22.2 89 0.0031 27.2 4.5 31 92-122 97-127 (481)
218 1edg_A Endoglucanase A; family 22.0 82 0.0028 26.3 4.1 31 94-124 95-125 (380)
219 3bmv_A Cyclomaltodextrin gluca 22.0 57 0.0019 30.0 3.2 29 99-127 116-146 (683)
220 1mzh_A Deoxyribose-phosphate a 22.0 51 0.0017 25.9 2.6 16 177-192 134-149 (225)
221 3jyf_A 2',3'-cyclic nucleotide 21.9 64 0.0022 27.1 3.3 29 98-126 186-214 (339)
222 2j78_A Beta-glucosidase A; fam 21.9 79 0.0027 28.0 4.0 34 92-125 113-146 (468)
223 3qho_A Endoglucanase, 458AA lo 21.9 92 0.0031 27.3 4.4 35 91-125 125-159 (458)
224 3dhu_A Alpha-amylase; structur 21.8 64 0.0022 27.7 3.4 27 99-125 83-111 (449)
225 1d3c_A Cyclodextrin glycosyltr 21.8 58 0.002 30.0 3.2 29 99-127 115-145 (686)
226 1j0h_A Neopullulanase; beta-al 21.7 59 0.002 29.2 3.2 28 99-126 222-251 (588)
227 4aef_A Neopullulanase (alpha-a 21.6 59 0.002 29.6 3.2 27 99-125 285-313 (645)
228 1m53_A Isomaltulose synthase; 21.4 61 0.0021 29.0 3.2 28 99-126 92-121 (570)
229 1zja_A Trehalulose synthase; s 21.4 61 0.0021 28.9 3.2 28 99-126 79-108 (557)
230 1twd_A Copper homeostasis prot 21.3 73 0.0025 26.0 3.4 24 165-192 67-90 (256)
231 1dul_A Signal recognition part 21.2 1.1E+02 0.0036 19.8 3.5 22 165-186 47-68 (69)
232 3r2g_A Inosine 5'-monophosphat 21.0 55 0.0019 28.0 2.7 22 177-198 101-125 (361)
233 3e96_A Dihydrodipicolinate syn 21.0 1.3E+02 0.0044 24.8 5.0 71 41-121 15-89 (316)
234 2ya0_A Putative alkaline amylo 20.7 62 0.0021 30.0 3.2 27 99-125 254-282 (714)
235 1cyg_A Cyclodextrin glucanotra 20.7 63 0.0021 29.7 3.2 29 99-127 111-141 (680)
236 1uok_A Oligo-1,6-glucosidase; 20.5 65 0.0022 28.7 3.2 28 99-126 78-107 (558)
237 1wzl_A Alpha-amylase II; pullu 20.3 61 0.0021 29.1 3.0 28 99-126 219-248 (585)
238 1b8z_A Protein (histonelike pr 20.3 1.2E+02 0.0041 19.9 3.9 34 164-197 15-49 (90)
239 3lfj_A Manxb, phosphotransfera 20.3 1.8E+02 0.0062 22.3 5.4 51 67-121 114-167 (187)
240 1qho_A Alpha-amylase; glycosid 20.3 65 0.0022 29.6 3.2 29 99-127 107-137 (686)
241 1owf_B IHF-beta, integration H 20.2 1.2E+02 0.004 20.2 3.8 34 164-197 16-50 (94)
242 3dmi_A Cytochrome C6; electron 20.2 91 0.0031 19.5 3.2 18 163-180 65-82 (88)
243 3bc9_A AMYB, alpha amylase, ca 20.1 66 0.0023 29.2 3.2 27 99-125 208-236 (599)
244 2o97_B NS1, HU-1, DNA-binding 20.1 1.1E+02 0.0039 20.1 3.7 34 164-197 15-49 (90)
245 2e8y_A AMYX protein, pullulana 20.1 65 0.0022 29.8 3.2 30 98-127 314-345 (718)
246 1vjz_A Endoglucanase; TM1752, 20.1 1.1E+02 0.0038 24.9 4.4 31 93-123 70-100 (341)
No 1
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=100.00 E-value=7.7e-56 Score=387.05 Aligned_cols=170 Identities=31% Similarity=0.444 Sum_probs=158.7
Q ss_pred cCCCCcceeCCeecCCceEeCCCCCCccC-CCCCcHHHHHHHHHHhcCC-CeEEEecceeccCCCCCCCCCccCCHHHHH
Q 037727 23 IPLLTPYKMGSFNLSHRIVLAPLSRMRSY-DYIPQPHAILYYSQRTTEG-GFLISEASVVSETGRGYKHTPGIWTKEQVE 100 (205)
Q Consensus 23 ~~Lf~Pi~ig~~~lkNRiv~aPm~~~~~~-~g~~t~~~~~~y~~rA~GG-GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~ 100 (205)
++||+|++||+++|||||||+||+++++. +|.||+.+++||++||+|| ||||+|+++|++.|+.++++++||+|++++
T Consensus 2 ~~Lf~P~~ig~~~l~NRiv~apm~~~~~~~~g~~t~~~~~yy~~rA~gG~Gliite~~~V~~~g~~~~~~~gi~~d~~i~ 81 (343)
T 3kru_A 2 SILHMPLKIKDITIKNRIMMSPMCMYSASTDGMPNDWHIVHYATRAIGGVGLIMQEATAVESRGRITDHDLGIWNDEQVK 81 (343)
T ss_dssp CGGGSCEEETTEEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSHHHHH
T ss_pred ccccccceeeeeeeeeeecccchhheecccCCCCCceeeeeeehhhccceeeeeehhhhhhhcCccccccccccCHHHHH
Confidence 57999999999999999999999998875 9999999999999999999 999999999999999999999999999999
Q ss_pred hHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 037727 101 AWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDFRIA 180 (205)
Q Consensus 101 ~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~~A 180 (205)
+||+|+++||++|+++++||+|+||++.. .+..+++||+++... ....|++||++||+++|++|++|
T Consensus 82 ~~~~~~~~vh~~G~~i~~QL~H~Gr~~~~----~g~~~~apS~i~~~~---------~~~~p~~mt~~eI~~ii~~f~~A 148 (343)
T 3kru_A 82 ELKKIVDICKANGAVMGIQLAHAGRKCNI----SYEDVVGPSPIKAGD---------RYKLPRELSVEEIKSIVKAFGEA 148 (343)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGGGCCC----TTSCCEESSSCCSST---------TSCCCEECCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCceEeeehhhccCccCc----chhhccCCCcCCCCc---------cccCchhcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999998865 245689999877532 23579999999999999999999
Q ss_pred HHHHHHccccee---eccchhhhhhcCC
Q 037727 181 ARNAIEAEIKSS---KQLGYVLEIECSY 205 (205)
Q Consensus 181 A~ra~~AGfDgV---~ahGyLl~qFlSp 205 (205)
|+||++|||||| +||||||+|||||
T Consensus 149 A~~a~~aGfDgVEih~ahGYLl~qFlsp 176 (343)
T 3kru_A 149 AKRANLAGYDVVEIHAAHGYLIHEFLSP 176 (343)
T ss_dssp HHHHHHHTCSEEEEEECTTSHHHHHHCT
T ss_pred HhhccccCCceEEEecccchhHHHhhcc
Confidence 999999999999 9999999999998
No 2
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=100.00 E-value=7.5e-56 Score=386.91 Aligned_cols=170 Identities=27% Similarity=0.417 Sum_probs=158.6
Q ss_pred CcCCCCcceeCCeecCCceEeCCCCCCccC--CCCCcHHHHHHHHHHhcCC-CeEEEecceeccCCCCCCCCCccCCHHH
Q 037727 22 IIPLLTPYKMGSFNLSHRIVLAPLSRMRSY--DYIPQPHAILYYSQRTTEG-GFLISEASVVSETGRGYKHTPGIWTKEQ 98 (205)
Q Consensus 22 ~~~Lf~Pi~ig~~~lkNRiv~aPm~~~~~~--~g~~t~~~~~~y~~rA~GG-GlIi~~~~~V~~~g~~~~~~~~l~~d~~ 98 (205)
+++||+|++||+++|||||||+||+++++. +|.||+.+++||++||+|| ||||+|+++|++.|+.++++++||+|++
T Consensus 2 ~~~Lf~p~~ig~~~l~NRiv~apm~~~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~g~~~~~~~~i~~d~~ 81 (340)
T 3gr7_A 2 NTMLFSPYTIRGLTLKNRIVMSPMCMYSCDTKDGAVRTWHKIHYPARAVGQVGLIIVEATGVTPQGRISERDLGIWSDDH 81 (340)
T ss_dssp CCSTTSCEEETTEEESSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSEECSSTTH
T ss_pred hhhcCCCEeECCEEEcCceEECCcCCCcccCCCCCCCHHHHHHHHHHhcCCceEEEEcceEecccccCCCCCcccCCHHH
Confidence 478999999999999999999999998874 8999999999999999999 9999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 037727 99 VEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDFR 178 (205)
Q Consensus 99 i~~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~ 178 (205)
+++||+|+++||++|+++++||+|+||++.+ +..+++||+++... ....|++||++||+++|++|+
T Consensus 82 i~~~~~~~~~vh~~G~~i~~QL~H~Gr~~~~-----~~~~~~pS~~~~~~---------~~~~p~~mt~~eI~~ii~~f~ 147 (340)
T 3gr7_A 82 IAGLRELVGLVKEHGAAIGIQLAHAGRKSQV-----PGEIIAPSAVPFDD---------SSPTPKEMTKADIEETVQAFQ 147 (340)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECCGGGCCS-----SSCCEESSSCCSST---------TSCCCEECCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCeEEEEeccCCCccCC-----CCCccCCCCccccC---------CCCCCccCCHHHHHHHHHHHH
Confidence 9999999999999999999999999998865 34579999877532 235799999999999999999
Q ss_pred HHHHHHHHccccee---eccchhhhhhcCC
Q 037727 179 IAARNAIEAEIKSS---KQLGYVLEIECSY 205 (205)
Q Consensus 179 ~AA~ra~~AGfDgV---~ahGyLl~qFlSp 205 (205)
+||++|++|||||| +||||||+|||||
T Consensus 148 ~aA~~a~~aGfDgVEih~a~GyLl~qFlsp 177 (340)
T 3gr7_A 148 NGARRAKEAGFDVIEIHAAHGYLINEFLSP 177 (340)
T ss_dssp HHHHHHHHHTCSEEEEEECTTCHHHHHHCT
T ss_pred HHHHHHHHcCCCEEEEccccchHHHHcCCC
Confidence 99999999999999 9999999999998
No 3
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=100.00 E-value=2.3e-55 Score=385.01 Aligned_cols=174 Identities=25% Similarity=0.402 Sum_probs=159.1
Q ss_pred cCCCCcceeCCeecCCceEeCCCCCCccC-CCCCcHHHHHHHHHHhcCC-CeEEEecceeccCCCCCCCCCccCCHHHHH
Q 037727 23 IPLLTPYKMGSFNLSHRIVLAPLSRMRSY-DYIPQPHAILYYSQRTTEG-GFLISEASVVSETGRGYKHTPGIWTKEQVE 100 (205)
Q Consensus 23 ~~Lf~Pi~ig~~~lkNRiv~aPm~~~~~~-~g~~t~~~~~~y~~rA~GG-GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~ 100 (205)
++||+|++||+++|||||||+||+++++. +|.||+.+++||++||+|| ||||+|+++|++.|+.++++++||+|++++
T Consensus 2 ~~Lf~p~~ig~~~l~NRiv~apm~~~~~~~~g~~~~~~~~~y~~rA~gg~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~ 81 (349)
T 3hgj_A 2 ALLFTPLELGGLRLKNRLAMSPMCQYSATLEGEVTDWHLLHYPTRALGGVGLILVEATAVEPLGRISPYDLGIWSEDHLP 81 (349)
T ss_dssp CGGGSCEEETTEEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSGGGHH
T ss_pred CcCCCCeeECCEEecCceEECCcCcCCcCCCCCCCHHHHHHHHHHhcCCceEEEecceeecccccCCCCcCccCcHHHHH
Confidence 57999999999999999999999998775 9999999999999999999 999999999999999999999999999999
Q ss_pred hHHHHHHHHHHcCCeeeEecccccccccCCCC--C---CCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 037727 101 AWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQ--P---NGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVN 175 (205)
Q Consensus 101 ~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~--~---~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii~ 175 (205)
+||+|+|+||++|+++++||+|+||++..... . .+..+++||+++... ....|++||++||+++|+
T Consensus 82 ~~~~~~~~vh~~G~~i~~Ql~H~Gr~~~~~~~~~~~~~~~~~~~~pS~~~~~~---------~~~~p~~mt~~eI~~ii~ 152 (349)
T 3hgj_A 82 GLKELARRIREAGAVPGIQLAHAGRKAGTARPWEGGKPLGWRVVGPSPIPFDE---------GYPVPEPLDEAGMERILQ 152 (349)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGGGCCBCCGGGTCCBCCCCCEESSSCCSST---------TCCCCEECCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCeEEEEeccCCccccccccccccccCCCcccCCCcccccC---------CCCCCccCCHHHHHHHHH
Confidence 99999999999999999999999999875320 0 144689999877542 235799999999999999
Q ss_pred HHHHHHHHHHHccccee---eccchhhhhhcCC
Q 037727 176 DFRIAARNAIEAEIKSS---KQLGYVLEIECSY 205 (205)
Q Consensus 176 ~f~~AA~ra~~AGfDgV---~ahGyLl~qFlSp 205 (205)
+|++||+||++|||||| +||||||+|||||
T Consensus 153 ~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp 185 (349)
T 3hgj_A 153 AFVEGARRALRAGFQVIELHMAHGYLLSSFLSP 185 (349)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCT
T ss_pred HHHHHHHHHHHcCCCEEEECCccchHHHHhcCC
Confidence 99999999999999999 9999999999998
No 4
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=100.00 E-value=4.2e-55 Score=385.15 Aligned_cols=175 Identities=26% Similarity=0.373 Sum_probs=159.4
Q ss_pred cCCCCcceeCCeecCCceEeCCCCCCccCCCCCcHHHHHHHHHHhcCC-CeEEEecceeccCCCCCCCCCccCCHHHHHh
Q 037727 23 IPLLTPYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEG-GFLISEASVVSETGRGYKHTPGIWTKEQVEA 101 (205)
Q Consensus 23 ~~Lf~Pi~ig~~~lkNRiv~aPm~~~~~~~g~~t~~~~~~y~~rA~GG-GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~ 101 (205)
++||+|++||+++|||||||+||+++++.+|.||+.+++||++||+|| ||||+|+++|++.|+.++++++||+|+++++
T Consensus 2 ~~Lf~P~~ig~~~l~NRiv~apm~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~ 81 (363)
T 3l5l_A 2 SALFEPYTLKDVTLRNRIAIPPMCQYMAEDGMINDWHHVHLAGLARGGAGLLVVEATAVAPEGRITPGCAGIWSDAHAQA 81 (363)
T ss_dssp CGGGSCEEETTEEESSSEEECCCCCCCCBTTBCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTCCBCSSHHHHHH
T ss_pred cccCCCeeECCEEeeCceEECCCCCCcCCCCCCCHHHHHHHHHHHccCceEEEecceeeCccccCCCCcceecCHHHHHH
Confidence 579999999999999999999999987789999999999999999999 9999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCeeeEecccccccccCCC-----------CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q 037727 102 WKPIVAEVQAKGGIFFCQLLHAGRISNRDF-----------QPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEI 170 (205)
Q Consensus 102 l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~-----------~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI 170 (205)
||+|+++||++|+++++||+|+||++.... ...+..+++||+++... .....|++||++||
T Consensus 82 ~~~~~~~vh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~pS~~~~~~--------~~~~~p~~mt~~eI 153 (363)
T 3l5l_A 82 FVPVVQAIKAAGSVPGIQIAHAGRKASANRPWEGDDHIAADDTRGWETIAPSAIAFGA--------HLPKVPREMTLDDI 153 (363)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCGGGCSBCCGGGTSSBCCTTCTTCCCCEESSSCCCBT--------TBCCCCEECCHHHH
T ss_pred HHHHHHHHHhcCCEEEEEeccCCccccccccccccccccccccCCCcccCCCCCccCC--------CCCCCCccCCHHHH
Confidence 999999999999999999999999986421 12344688999877532 01357999999999
Q ss_pred HHHHHHHHHHHHHHHHccccee---eccchhhhhhcCC
Q 037727 171 PQIVNDFRIAARNAIEAEIKSS---KQLGYVLEIECSY 205 (205)
Q Consensus 171 ~~ii~~f~~AA~ra~~AGfDgV---~ahGyLl~qFlSp 205 (205)
+++|++|++||+||++|||||| +||||||+|||||
T Consensus 154 ~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp 191 (363)
T 3l5l_A 154 ARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSE 191 (363)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCC
Confidence 9999999999999999999999 9999999999998
No 5
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=100.00 E-value=9.3e-56 Score=388.71 Aligned_cols=181 Identities=34% Similarity=0.620 Sum_probs=158.1
Q ss_pred CcCCCCcceeCCeecCCceEeCCCCCCcc-CCCCCcHHHHHHHHHHhcCCCeEEEecceeccCCCCCCCCCccCCHHHHH
Q 037727 22 IIPLLTPYKMGSFNLSHRIVLAPLSRMRS-YDYIPQPHAILYYSQRTTEGGFLISEASVVSETGRGYKHTPGIWTKEQVE 100 (205)
Q Consensus 22 ~~~Lf~Pi~ig~~~lkNRiv~aPm~~~~~-~~g~~t~~~~~~y~~rA~GGGlIi~~~~~V~~~g~~~~~~~~l~~d~~i~ 100 (205)
.++||+|++||+++|||||||+||+++++ .+|.||+.+++||++||+| ||||+|+++|++.|+.++++++||+|++++
T Consensus 1 Mp~LF~P~~ig~~~lkNRiv~apm~~~~a~~dg~~t~~~~~~y~~rA~g-Gliite~~~V~~~g~~~~~~~gi~~d~~i~ 79 (358)
T 4a3u_A 1 MPSLFDPIRFGAFTAKNRIWMAPLTRGRATRDHVPTEIMAEYYAQRASA-GLIISEATGISQEGLGWPYAPGIWSDAQVE 79 (358)
T ss_dssp -CCTTSCEEETTEEESCSEEECCCCCCCSCTTCCCCHHHHHHHHHTTTS-SSEEEEEEESSTTTCCSTTCCBCSSHHHHH
T ss_pred CCCCCCCceECCEEECCceEEcccCCCccCCCCCCCHHHHHHHHHHcCC-CEEEEeeeEECccccCCCCCcccCchHhHH
Confidence 36899999999999999999999999886 6899999999999999964 899999999999999999999999999999
Q ss_pred hHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 037727 101 AWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDFRIA 180 (205)
Q Consensus 101 ~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~~A 180 (205)
+||+|+++||++|+++++||+|+||++.... .+..+++||+++.+..........+...|++||++||++||++|++|
T Consensus 80 ~~k~l~~avh~~G~~i~~QL~H~Gr~~~~~~--~g~~~~apS~~~~~~~~~~~~~~~~~~~pr~mt~~eI~~ii~~F~~A 157 (358)
T 4a3u_A 80 AWLPITQAVHDAGGLIFAQLWHMGRMVPSNV--SGMQPVAPSASQAPGLGHTYDGKKPYDVARALRLDEIPRLLDDYEKA 157 (358)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCGGGCCHHH--HSSCCEESSCEECSSEEECSSSEEECCEEEECCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCceeeccccccccccccc--cccCCCCCcccccCCcccccCCCCCCccCccCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999986542 35568899986643211000001123568999999999999999999
Q ss_pred HHHHHHccccee---eccchhhhhhcCC
Q 037727 181 ARNAIEAEIKSS---KQLGYVLEIECSY 205 (205)
Q Consensus 181 A~ra~~AGfDgV---~ahGyLl~qFlSp 205 (205)
|+||++|||||| +||||||+|||||
T Consensus 158 A~rA~~AGFDgVEIH~ahGYLl~QFLSp 185 (358)
T 4a3u_A 158 ARHALKAGFDGVQIHAANGYLIDEFIRD 185 (358)
T ss_dssp HHHHHHTTCSEEEEEECTTSHHHHHHST
T ss_pred HHHHHHcCCCeEeecccCCCcHHhceec
Confidence 999999999999 9999999999998
No 6
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=100.00 E-value=1.5e-55 Score=392.41 Aligned_cols=186 Identities=29% Similarity=0.457 Sum_probs=154.4
Q ss_pred CCCcCCCCcceeCCeecCCceEeCCCCCCcc-CCC-CCc-HHHHHHHHHHhcCC-CeEEEecceeccCCCCCCCCCccCC
Q 037727 20 NNIIPLLTPYKMGSFNLSHRIVLAPLSRMRS-YDY-IPQ-PHAILYYSQRTTEG-GFLISEASVVSETGRGYKHTPGIWT 95 (205)
Q Consensus 20 ~~~~~Lf~Pi~ig~~~lkNRiv~aPm~~~~~-~~g-~~t-~~~~~~y~~rA~GG-GlIi~~~~~V~~~g~~~~~~~~l~~ 95 (205)
+..++||+|++||+++|||||||+||+++++ .+| .++ +.+++||++||+|| ||||+|+++|++.|+.++++++||+
T Consensus 12 ~~~s~LF~P~~ig~l~lkNRiv~aPm~~~~a~~~g~v~~~d~~~~yy~~rA~GG~GLIite~~~V~~~g~~~~~~~gi~~ 91 (400)
T 4gbu_A 12 LGDTNLFKPIKIGNNELLHRAVIPPLTRMRALHPGNIPNRDWAVEYYTQRAQRPGTMIITEGAFISPQAGGYDNAPGVWS 91 (400)
T ss_dssp CTTSGGGSCEEETTEEESSSEEBCCCCCCCCBTTTTBCCTTTHHHHHHHHTCSTTCEEECSCEESSGGGCCCTTSCBSSS
T ss_pred CCCCCCCCCeeECCEEEcCcCEeCCccCCcCCCCCCCCCHHHHHHHHHHHHcCCeEEEEEcCeEECccccCCCCCCccCC
Confidence 4457899999999999999999999999876 455 444 67899999999999 9999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHcCCeeeEecccccccccCCCC-CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 037727 96 KEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQ-PNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIV 174 (205)
Q Consensus 96 d~~i~~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~-~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii 174 (205)
|+++++||+|+++||++|+++++||+|+||++.+... ..+..+.++|.......+...........|++||++||++||
T Consensus 92 d~~i~~~k~l~davH~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~pr~mt~~eI~~ii 171 (400)
T 4gbu_A 92 EEQMVEWTKIFNAIHEKKSFVWVQLAVLGWAAFPDNLARDGLRYDSASDNVFMDAEQEAKAKKANNPQHSLTKDEIKQYI 171 (400)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEEECCGGGSCHHHHHHTTCCCEESCSSCCSCHHHHHHHHHTTCCCEECCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCceEEeeeecCcccCccccccCCCcccCccccccCCCCcccccccCCCCCccCCHHHHHHHH
Confidence 9999999999999999999999999999999865321 123444555543322100000000123568999999999999
Q ss_pred HHHHHHHHHHHHccccee---eccchhhhhhcCC
Q 037727 175 NDFRIAARNAIEAEIKSS---KQLGYVLEIECSY 205 (205)
Q Consensus 175 ~~f~~AA~ra~~AGfDgV---~ahGyLl~qFlSp 205 (205)
++|++||+||++|||||| +||||||+|||||
T Consensus 172 ~~F~~AA~rA~~AGFDgVEIH~AhGYLl~QFLSp 205 (400)
T 4gbu_A 172 KEYVQAAKNSIAAGADGVEIHSANGYLLNQFLDP 205 (400)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCT
T ss_pred HHHHHHHHHHHhcCcCeeeecccccchHHheecC
Confidence 999999999999999999 9999999999998
No 7
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=100.00 E-value=4.5e-54 Score=378.09 Aligned_cols=181 Identities=38% Similarity=0.634 Sum_probs=160.4
Q ss_pred cCCCCcceeCCeecCCceEeCCCCCCcc-CCCCCcHHHHHHHHHHhcCCCeEEEecceeccCCCCCCCCCccCCHHHHHh
Q 037727 23 IPLLTPYKMGSFNLSHRIVLAPLSRMRS-YDYIPQPHAILYYSQRTTEGGFLISEASVVSETGRGYKHTPGIWTKEQVEA 101 (205)
Q Consensus 23 ~~Lf~Pi~ig~~~lkNRiv~aPm~~~~~-~~g~~t~~~~~~y~~rA~GGGlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~ 101 (205)
++||+|++||+++|||||||+||+++++ .+|.||+.+++||++||+ +||||+|+++|++.|+.++++++||+|+++++
T Consensus 2 ~~Lf~P~~ig~~~lkNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~-~GLIite~~~V~~~g~~~~~~~gi~~d~~i~~ 80 (362)
T 4ab4_A 2 TTLFDPIKLGDLQLPNRIIMAPLTRCRADEGRVPNALMAEYYVQRAS-AGLILSEATSVSPMGVGYPDTPGIWNDEQVRG 80 (362)
T ss_dssp CCTTSCEEETTEEESCSEEECCCCCCCCBTTTBCCHHHHHHHHHTTT-SSEEEEEEEESSGGGCCSTTCCBCSSHHHHHH
T ss_pred cccCCCeeECCEEeeCccEECCccCCccCCCCCCCHHHHHHHHHHHh-hCEEeeeeeEecccccCCCCCCCcCCHHHHHH
Confidence 4799999999999999999999999887 589999999999999999 68999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 037727 102 WKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDFRIAA 181 (205)
Q Consensus 102 l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~~AA 181 (205)
||+|+++||++|+++++||+|+||++.+... .+..+++||+++................|++||++||+++|++|++||
T Consensus 81 ~k~l~~avH~~G~~i~~QL~H~Gr~~~~~~~-~g~~~vapS~i~~~~~~~~~~~~~~~~~pr~mt~~eI~~ii~~f~~AA 159 (362)
T 4ab4_A 81 WNNVTKAVHAAGGRIFLQLWHVGRISHPSYL-NGELPVAPSAIQPKGHVSLVRPLSDYPTPRALETEEINDIVEAYRSGA 159 (362)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCTTSCCGGGT-TTCCCEESSCCCCSSBCSSCSSCCBCCCCEECCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEEeccCccccccccc-CCCcccCCCCCCCCccccccccccCCCCCCcCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999876542 456789999987542110000001246799999999999999999999
Q ss_pred HHHHHccccee---eccchhhhhhcCC
Q 037727 182 RNAIEAEIKSS---KQLGYVLEIECSY 205 (205)
Q Consensus 182 ~ra~~AGfDgV---~ahGyLl~qFlSp 205 (205)
+||++|||||| +||||||+|||||
T Consensus 160 ~~a~~aGfDgVEih~a~GYLl~QFLSp 186 (362)
T 4ab4_A 160 ENAKAAGFDGVEIHGANGYLLDQFLQS 186 (362)
T ss_dssp HHHHHTTCSEEEEECCTTSHHHHHHST
T ss_pred HHHHHcCCCEEEECCcCccHHHhhcCC
Confidence 99999999999 9999999999998
No 8
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=100.00 E-value=4.6e-54 Score=377.87 Aligned_cols=182 Identities=35% Similarity=0.611 Sum_probs=161.3
Q ss_pred CcCCCCcceeCCeecCCceEeCCCCCCcc-CCCCCcHHHHHHHHHHhcCCCeEEEecceeccCCCCCCCCCccCCHHHHH
Q 037727 22 IIPLLTPYKMGSFNLSHRIVLAPLSRMRS-YDYIPQPHAILYYSQRTTEGGFLISEASVVSETGRGYKHTPGIWTKEQVE 100 (205)
Q Consensus 22 ~~~Lf~Pi~ig~~~lkNRiv~aPm~~~~~-~~g~~t~~~~~~y~~rA~GGGlIi~~~~~V~~~g~~~~~~~~l~~d~~i~ 100 (205)
.+.||+|++||+++|||||||+||+++++ .+|.||+.+++||++||+ +||||+|+++|++.|+.++++++||+|++++
T Consensus 9 ~~~~f~P~~ig~~~lkNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~-~GLIite~~~V~~~g~~~~~~~gi~~d~~i~ 87 (361)
T 3gka_A 9 MPSLFDPLTIGDLTLANRIIMAPLTRARAGDTRTPNALMARYYAERAS-AGLIISEATSVTPQGVGYASTPGIWSPEQVD 87 (361)
T ss_dssp CCCTTSCEEETTEEESCSEEECCCCCCCSTTTTCCCHHHHHHHHTTTT-SSEEEEEEEESSGGGCCSTTCCBSSSHHHHH
T ss_pred CccccCCeeECCEEecCccEECCCCCCccCCCCCCCHHHHHHHHHHHh-CCEEEEcceeecccccCCCCCCccCCHHHHH
Confidence 57899999999999999999999999887 689999999999999999 6999999999999999999999999999999
Q ss_pred hHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 037727 101 AWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDFRIA 180 (205)
Q Consensus 101 ~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~~A 180 (205)
+||+|+++||++|+++++||+|+||++.+... .+..+++||+++................|++||++||+++|++|++|
T Consensus 88 ~~k~l~~avH~~G~~i~~QL~H~Gr~~~~~~~-~g~~~vapS~i~~~~~~~~~~g~~~~~~pr~mt~~eI~~ii~~f~~A 166 (361)
T 3gka_A 88 GWRLVTDAVHAAGGRIFLQLWHVGRVSDPVFL-DGALPVAPSAIAPGGHVSLVRPQRPYVTPRALELDEIPGVVAAFRRG 166 (361)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCTTSCCGGGT-TTCCCEESSSCCCSSBCSSCSSCCBCCCCEECCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCeEEEeeccCCcccccccc-CCCCcccCCCCCCCCcccccccccCCCCCccCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999876542 45678999998754211000000124579999999999999999999
Q ss_pred HHHHHHccccee---eccchhhhhhcCC
Q 037727 181 ARNAIEAEIKSS---KQLGYVLEIECSY 205 (205)
Q Consensus 181 A~ra~~AGfDgV---~ahGyLl~qFlSp 205 (205)
|+||++|||||| +||||||+|||||
T Consensus 167 A~~A~~aGfDgVEih~a~GYLl~QFLsp 194 (361)
T 3gka_A 167 AENARAAGFDGVEVHGANGYLLDQFLQD 194 (361)
T ss_dssp HHHHHHTTCSEEEEECCTTSHHHHHHST
T ss_pred HHHHHHcCCCEEEECCcCccHHHhccCc
Confidence 999999999999 9999999999998
No 9
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=100.00 E-value=9.8e-55 Score=386.41 Aligned_cols=186 Identities=30% Similarity=0.468 Sum_probs=162.5
Q ss_pred CCCCcCCCCcceeCCeecCCceEeCCCCCCcc-CCCCCcHHHHHHHHHHhcCC-CeEEEecceeccCCCCCCC-CCccCC
Q 037727 19 NNNIIPLLTPYKMGSFNLSHRIVLAPLSRMRS-YDYIPQPHAILYYSQRTTEG-GFLISEASVVSETGRGYKH-TPGIWT 95 (205)
Q Consensus 19 ~~~~~~Lf~Pi~ig~~~lkNRiv~aPm~~~~~-~~g~~t~~~~~~y~~rA~GG-GlIi~~~~~V~~~g~~~~~-~~~l~~ 95 (205)
.|++++||+|++||+++|||||||+||+++++ .+|.||+.+++||++||+|| ||||+|+++|++.|+.+++ +++||+
T Consensus 8 ~m~~~~Lf~P~~ig~~~LkNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~gG~GLIIte~~~V~~~g~~~~~~~~gi~~ 87 (407)
T 3tjl_A 8 PLKDSEAFQSIKVGNNTLQTKIVYPPTTRFRALEDHTPSDLQLQYYGDRSTFPGTLLITEATFVSPQASGYEGAAPGIWT 87 (407)
T ss_dssp CCTTSGGGSCEEETTEEESCSEEBCCCCCCBSCTTSCCBHHHHHHHHHTCCSTTCEEEEEEEESSGGGCCCSSBCCBCSS
T ss_pred CCCcccCCCCeeECCEEecCCcEECCCCCCccCCCCCCCHHHHHHHHHHHcCCceEEEEcceEECCccCCCCCcCcccCC
Confidence 36778999999999999999999999999876 58999999999999999999 9999999999999999999 999999
Q ss_pred HHHHHhHHHHHHHHHHcCCeeeEecccccccccCCCC-CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 037727 96 KEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQ-PNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIV 174 (205)
Q Consensus 96 d~~i~~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~-~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii 174 (205)
|+++++||+|+++||++|+++++||+|+||++.+... ..|..+++||+++...... .........|++||++||+++|
T Consensus 88 d~~i~~~k~l~~avH~~G~~i~~QL~H~Gr~~~~~~~~~~g~~~vapS~i~~~~~~~-~~~~~~~~~pr~lt~~eI~~ii 166 (407)
T 3tjl_A 88 DKHAKAWKVITDKVHANGSFVSTQLIFLGRVADPAVMKTRGLNPVSASATYESDAAK-EAAEAVGNPVRALTTQEVKDLV 166 (407)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEEECCGGGSCHHHHHHTTCCCEESSSCCSSHHHH-HHHHHTTCCCEECCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEeccCCCccchhhcccCCCcccCCCCcccccccc-cccccCCCCCCcCCHHHHHHHH
Confidence 9999999999999999999999999999999875421 1345689999876520000 0000123579999999999999
Q ss_pred HH-HHHHHHHHHHccccee---eccchhhhhhcCC
Q 037727 175 ND-FRIAARNAIEAEIKSS---KQLGYVLEIECSY 205 (205)
Q Consensus 175 ~~-f~~AA~ra~~AGfDgV---~ahGyLl~qFlSp 205 (205)
++ |++||+||++|||||| +||||||+|||||
T Consensus 167 ~~~~~~aa~~a~~aGfdgveih~~~GYLl~QFLsp 201 (407)
T 3tjl_A 167 YEAYTNAAQKAMDAGFDYIELHAAHGYLLDQFLQP 201 (407)
T ss_dssp HTHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHST
T ss_pred HHHHHHHHHHHHHhCCCeEEECCccchHHHHhcCc
Confidence 99 9999999999999999 9999999999998
No 10
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=100.00 E-value=1.5e-54 Score=387.70 Aligned_cols=174 Identities=20% Similarity=0.257 Sum_probs=158.1
Q ss_pred CcCCCCccee-CCeecCCceEeCCCCCCcc-CCCCCcHHHHHHHHHHhcCC-CeEEEecceeccCCCCCCCCCccCCHHH
Q 037727 22 IIPLLTPYKM-GSFNLSHRIVLAPLSRMRS-YDYIPQPHAILYYSQRTTEG-GFLISEASVVSETGRGYKHTPGIWTKEQ 98 (205)
Q Consensus 22 ~~~Lf~Pi~i-g~~~lkNRiv~aPm~~~~~-~~g~~t~~~~~~y~~rA~GG-GlIi~~~~~V~~~g~~~~~~~~l~~d~~ 98 (205)
|++||+|++| |+++|||||||+||+++++ .+|.||+.+++||++||+ | ||||+|+++|++.|+.++++++||+|++
T Consensus 24 ~~~Lf~P~~i~g~~~lkNRiv~aPm~~~~a~~dg~~t~~~~~yy~~rA~-G~GLiIte~~~V~~~g~~~~~~~gi~~d~~ 102 (419)
T 3l5a_A 24 YKPLLQSIHLPNGIKISNRFVLSPMTVNASTKEGYITKADLAYAARRSN-SAGMQVTGAAYIEPYGKLFEYGFNIDHDAC 102 (419)
T ss_dssp TGGGGSCEECTTSCEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHTTT-SCSEEEEEEEESSGGGCCSTTCEECSSGGG
T ss_pred hhhcCCCEEeCCCCEECCCeEeCCCCCCccCCCCCCCHHHHHHHHHHhc-CCcEEEecceEeCcccccCCCccccccHHH
Confidence 6889999999 9999999999999999887 589999999999999997 7 9999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 037727 99 VEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDFR 178 (205)
Q Consensus 99 i~~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~ 178 (205)
+++||+|+++||++|+++++||+|+||++.+... .+..+++||+++... .....|++||++||+++|++|+
T Consensus 103 i~~~k~l~~avh~~G~~i~~QL~H~Gr~~~~~~~-~~~~~vapS~i~~~~--------~~~~~pr~mt~~eI~~ii~~F~ 173 (419)
T 3l5a_A 103 IPGLTNMASTMKQHGSLAIIQLAHAGRFSNQAIL-NFGKVYGPSPMTLHS--------PIEHVVIAMSHEKINSIIQQYR 173 (419)
T ss_dssp HHHHHHHHHHHHTTSCEEEEEEECCGGGCHHHHH-HHSEEEESSCEEECS--------SSSEEEEECCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCEEEEEeccCCCccccccc-CCCceeCCCCCcccc--------CCCCCCccCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999865421 134578999876532 0124689999999999999999
Q ss_pred HHHHHHHHccccee---eccchhhhhhcCC
Q 037727 179 IAARNAIEAEIKSS---KQLGYVLEIECSY 205 (205)
Q Consensus 179 ~AA~ra~~AGfDgV---~ahGyLl~qFlSp 205 (205)
+||+||++|||||| +||||||+|||||
T Consensus 174 ~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp 203 (419)
T 3l5a_A 174 DATLRAIKAGFDGVEISIAQRLLIQTFFST 203 (419)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSHHHHHHCT
T ss_pred HHHHHHHHcCCCEEEECCccchHHHHccCC
Confidence 99999999999999 9999999999998
No 11
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=100.00 E-value=4.2e-52 Score=367.75 Aligned_cols=184 Identities=33% Similarity=0.594 Sum_probs=159.3
Q ss_pred CCcCCCCcceeCCeecCCceEeCCCCCCcc--CCCCCc-HHHHHHHHHHhcCCCeEEEecceeccCCCCCCCCCccCCHH
Q 037727 21 NIIPLLTPYKMGSFNLSHRIVLAPLSRMRS--YDYIPQ-PHAILYYSQRTTEGGFLISEASVVSETGRGYKHTPGIWTKE 97 (205)
Q Consensus 21 ~~~~Lf~Pi~ig~~~lkNRiv~aPm~~~~~--~~g~~t-~~~~~~y~~rA~GGGlIi~~~~~V~~~g~~~~~~~~l~~d~ 97 (205)
.|++||+|++||+++|||||||+||+++++ .+|.|| +.+++||++|| |.||||+|+++|++.|+.++++++||+|+
T Consensus 3 ~~~~Lf~P~~ig~~~l~NRiv~apm~~~~a~~~~g~pt~~~~~~yY~~rA-~~GLIite~~~v~~~g~~~~~~~gi~~d~ 81 (379)
T 3aty_A 3 TFPELLRPLKLGRYTLRNRIIMAPLTRCQATEDDHVPRTESMLKYYEDRA-SAGLIIAEATMVQPNYTGFLTEPGIYSDA 81 (379)
T ss_dssp SSTTTTSCEEETTEEESCSEEECCCCCCCBCTTTCCBCHHHHHHHHHTTT-TSSEEEEEEEESSTTCCSSSSCCBSSSHH
T ss_pred CchhcCCCeeECCEEEcCccEECCcCCCcccCCCCccCHHHHHHHHHHHh-CCCeEEECceecccccccCCCCCCcCCHH
Confidence 478899999999999999999999999987 489999 99999999999 33999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHcCCeeeEecccccccccC--CCCC--CCCCc-----cccCCCCCCC---CCCCCCCC--CCCCCCC
Q 037727 98 QVEAWKPIVAEVQAKGGIFFCQLLHAGRISNR--DFQP--NGKAP-----ISYSDKPLKN---QPNGGFNA--AEFTPPR 163 (205)
Q Consensus 98 ~i~~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~--~~~~--~g~~~-----~~pS~~~~~~---~~~~~~~~--~~~~~~~ 163 (205)
++++||+|+++||++|+++++||+|+||++.+ .+.. .+..+ ++||+++... .......+ .....|+
T Consensus 82 ~i~~~k~~~~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~g~~~~~~~~~apS~i~~~~~~~~~~~~~~g~~~~~~~pr 161 (379)
T 3aty_A 82 QIEEWRKIVDAVHKKGGLIFLQLIHAGRAGIPEKILQQSKSDQDPLAGRLLAASAIPIKDHRIPAYFAASGEKETYGVPE 161 (379)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEECCGGGSCHHHHTTSCCCSSSTTTTCCEESSSCCCCSCCBCTTTSTTSSCBCCCCCE
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeccCCcccCcccccccccCCCCCccCcccCCCCCccccccccccccccccccCCCCCc
Confidence 99999999999999999999999999999875 3211 34456 9999887542 00000001 1235799
Q ss_pred CCCHHHHH-HHHHHHHHHHHHHH-Hccccee---eccchhhhhhcCC
Q 037727 164 RLRTGEIP-QIVNDFRIAARNAI-EAEIKSS---KQLGYVLEIECSY 205 (205)
Q Consensus 164 ~mt~~eI~-~ii~~f~~AA~ra~-~AGfDgV---~ahGyLl~qFlSp 205 (205)
+||++||+ +++++|++||++|+ +|||||| +||||||+|||||
T Consensus 162 ~lt~~eI~~~~i~~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp 208 (379)
T 3aty_A 162 ELTDDEVRDGIIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRE 208 (379)
T ss_dssp ECCHHHHHHTHHHHHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHST
T ss_pred cCCHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCC
Confidence 99999999 99999999999999 9999999 9999999999998
No 12
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=100.00 E-value=5.4e-52 Score=369.56 Aligned_cols=184 Identities=48% Similarity=0.791 Sum_probs=159.9
Q ss_pred CCcCCCCcceeCCeecCCceEeCCCCCCccCCCCCcHHHHHHHHHHhcCCCeEEEecceeccCCCCCCCCCccCCHHHHH
Q 037727 21 NIIPLLTPYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEGGFLISEASVVSETGRGYKHTPGIWTKEQVE 100 (205)
Q Consensus 21 ~~~~Lf~Pi~ig~~~lkNRiv~aPm~~~~~~~g~~t~~~~~~y~~rA~GGGlIi~~~~~V~~~g~~~~~~~~l~~d~~i~ 100 (205)
.+++||+|++||+++|||||||+||++.++.+|.||+.+++||++||+|.||||+|+++|++.|..++++++||+|++++
T Consensus 14 ~~~~Lf~P~~ig~~~L~NRiv~aPm~~~~a~~g~pt~~~~~yy~~rA~G~GLIitE~~~v~~~g~~~~~~~gi~~d~~i~ 93 (402)
T 2hsa_B 14 GNNPLFSPYKMGKFNLSHRVVLAPMTRCRALNNIPQAALGEYYEQRATAGGFLITEGTMISPTSAGFPHVPGIFTKEQVR 93 (402)
T ss_dssp ---CTTSCEEETTEEESCSEEECCCCCCCSGGGCCCHHHHHHHHHHCCTTCEEECCCEESSTTCCCSTTCCBCSSHHHHH
T ss_pred hhhhcCCCeeECCEEecCCeEECCCCCCcCCCCCCCHHHHHHHHHHhccCCEEEecceeeccccccCCCCcccCCHHHHH
Confidence 46789999999999999999999999988766799999999999999966999999999999999999999999999999
Q ss_pred hHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCCC--CCCCCCC--CCCCCCCCCCHHHHHHHHHH
Q 037727 101 AWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQ--PNGGFNA--AEFTPPRRLRTGEIPQIVND 176 (205)
Q Consensus 101 ~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~--~~~~~~~--~~~~~~~~mt~~eI~~ii~~ 176 (205)
+||+|+++||++|+++++||+|+||++.+.....|..+++||+++.... .. ...+ .....|++||++||++++++
T Consensus 94 ~~k~l~~avh~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~apS~v~~~~~~~~~-~~~g~~~~~~~p~~mt~~eI~~ii~~ 172 (402)
T 2hsa_B 94 EWKKIVDVVHAKGAVIFCQLWHVGRASHEVYQPAGAAPISSTEKPISNRWRIL-MPDGTHGIYPKPRAIGTYEISQVVED 172 (402)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCTTSCCGGGCTTCCCCEESCSCCCCTTCEEE-CTTSCEEECCCCEECCGGGHHHHHHH
T ss_pred HHHHHHHHHHhcCCeEEEEeccCCcccccccccCCCccccCCCcccccccccc-cccccccCCCCCccCCHHHHHHHHHH
Confidence 9999999999999999999999999987654334567899999875420 00 0000 01256999999999999999
Q ss_pred HHHHHHHHHHccccee---eccchhhhhhcCC
Q 037727 177 FRIAARNAIEAEIKSS---KQLGYVLEIECSY 205 (205)
Q Consensus 177 f~~AA~ra~~AGfDgV---~ahGyLl~qFlSp 205 (205)
|++||+||++|||||| +||||||+|||||
T Consensus 173 f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp 204 (402)
T 2hsa_B 173 YRRSALNAIEAGFDGIEIHGAHGYLIDQFLKD 204 (402)
T ss_dssp HHHHHHHHHHTTCSEEEEECCTTSHHHHHHCT
T ss_pred HHHHHHHHHHcCCCEEEECCccchHHHhccCC
Confidence 9999999999999999 9999999999998
No 13
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=100.00 E-value=5.8e-52 Score=366.61 Aligned_cols=187 Identities=64% Similarity=1.046 Sum_probs=163.3
Q ss_pred ccCCCCcCCCCcceeCCeecCCceEeCCCCCCccCCCCCcHHHHHHHHHHhcCCCeEEEecceeccCCCCCCCCCccCCH
Q 037727 17 KNNNNIIPLLTPYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEGGFLISEASVVSETGRGYKHTPGIWTK 96 (205)
Q Consensus 17 ~~~~~~~~Lf~Pi~ig~~~lkNRiv~aPm~~~~~~~g~~t~~~~~~y~~rA~GGGlIi~~~~~V~~~g~~~~~~~~l~~d 96 (205)
...|++++||+|++||+++|||||||+||++.++.+|.||+.+++||++||+|.||||+|+++|++.|..+++++++|+|
T Consensus 8 ~~~m~~~~Lf~P~~ig~~~l~NRiv~aPm~~~~a~~g~pt~~~~~yy~~rA~g~GLiite~~~v~~~g~~~~~~~gi~~d 87 (376)
T 1icp_A 8 EKQVDKIPLMSPCKMGKFELCHRVVLAPLTRQRSYGYIPQPHAILHYSQRSTNGGLLIGEATVISETGIGYKDVPGIWTK 87 (376)
T ss_dssp --CCCCCGGGSCEEETTEEESCSEEECCCCCCCCGGGSCCHHHHHHHHHTCCTTCEEECCCEECSGGGCCSTTCCBCSSH
T ss_pred cccCChhhcCCCeeECCEEECCccEECCcCcCcCCCCCCCHHHHHHHHHhcCCeeEEEECceeeccccccCcccCccCCH
Confidence 33577889999999999999999999999998876689999999999999995599999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCC---CCCCCCCCCCHHHHHHH
Q 037727 97 EQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNA---AEFTPPRRLRTGEIPQI 173 (205)
Q Consensus 97 ~~i~~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~---~~~~~~~~mt~~eI~~i 173 (205)
+++++||+++++||++|+++++||+|+||++.+.....+..+++||+++.... .. ..+ .....|++||++||+++
T Consensus 88 ~~i~~~k~l~~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~apS~~~~~~~-~~-~~~~~~~~~~~p~~mt~~eI~~~ 165 (376)
T 1icp_A 88 EQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNKDFQPNGEDPISCTDRGLTPQ-IM-SNGIDIAHFTRPRRLTTDEIPQI 165 (376)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEECCTTSSCTTTSGGGCCCEESSSCCCCCE-EC-TTSSCEECCCCCEECCTTTHHHH
T ss_pred HHHHHHHHHHHHHHhcCCeEEEEeecCCCCcCcccccCCCceecCCCCCCccc-cc-cccccccCCCCCCcCCHHHHHHH
Confidence 99999999999999999999999999999987654323566899998875410 00 000 12256999999999999
Q ss_pred HHHHHHHHHHHHHccccee---eccchhhhhhcCC
Q 037727 174 VNDFRIAARNAIEAEIKSS---KQLGYVLEIECSY 205 (205)
Q Consensus 174 i~~f~~AA~ra~~AGfDgV---~ahGyLl~qFlSp 205 (205)
+++|++||++|++|||||| +||||||+|||||
T Consensus 166 i~~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp 200 (376)
T 1icp_A 166 VNEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKD 200 (376)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCT
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCccchhhhhccCC
Confidence 9999999999999999999 9999999999998
No 14
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=100.00 E-value=4.3e-51 Score=356.43 Aligned_cols=171 Identities=27% Similarity=0.401 Sum_probs=158.3
Q ss_pred CCcCCCCcceeCCeecCCceEeCCCCCCcc--CCCCCcHHHHHHHHHHhcCC-CeEEEecceeccCCCCCCCCCccCCHH
Q 037727 21 NIIPLLTPYKMGSFNLSHRIVLAPLSRMRS--YDYIPQPHAILYYSQRTTEG-GFLISEASVVSETGRGYKHTPGIWTKE 97 (205)
Q Consensus 21 ~~~~Lf~Pi~ig~~~lkNRiv~aPm~~~~~--~~g~~t~~~~~~y~~rA~GG-GlIi~~~~~V~~~g~~~~~~~~l~~d~ 97 (205)
++++||+|++||+++|||||||+||++.++ .+|.||+.+++||++||+|| ||||||+++|++.|+.+++++++|+|+
T Consensus 1 ~~~~Lf~p~~ig~~~l~NRiv~aPm~~~~~~~~~g~~~~~~~~~y~~rA~gG~gliite~~~v~~~g~~~~~~~~i~~d~ 80 (338)
T 1z41_A 1 MARKLFTPITIKDMTLKNRIVMSPMCMYSSHEKDGKLTPFHMAHYISRAIGQVGLIIVEASAVNPQGRITDQDLGIWSDE 80 (338)
T ss_dssp -CCGGGSCEEETTEEESSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSTH
T ss_pred CccccCCCeeECCEEEcCccEECCcCCCcCCCCCCCCCHHHHHHHHHHHcCCCCEEEeCCeeccccccCCCCCcccCCHH
Confidence 357899999999999999999999999876 48999999999999999999 999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 037727 98 QVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDF 177 (205)
Q Consensus 98 ~i~~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f 177 (205)
++++||+++++||++|+++++||+|+||++.+. ..+++||+++... ....|++||++||++++++|
T Consensus 81 ~~~~~~~~~~~vh~~g~~i~~QL~h~Gr~~~~~-----~~~~~pS~~~~~~---------~~~~p~~mt~~eI~~~i~~~ 146 (338)
T 1z41_A 81 HIEGFAKLTEQVKEQGSKIGIQLAHAGRKAELE-----GDIFAPSAIAFDE---------QSATPVEMSAEKVKETVQEF 146 (338)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEECCGGGCCCS-----SCCEESSSCCSST---------TSCCCEECCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCEEEEEecCCCcccCCC-----CCCcCCCCCCCCC---------CCCCCccCCHHHHHHHHHHH
Confidence 999999999999999999999999999998754 2479999887542 23579999999999999999
Q ss_pred HHHHHHHHHccccee---eccchhhhhhcCC
Q 037727 178 RIAARNAIEAEIKSS---KQLGYVLEIECSY 205 (205)
Q Consensus 178 ~~AA~ra~~AGfDgV---~ahGyLl~qFlSp 205 (205)
++||++|++|||||| ++|||||+|||||
T Consensus 147 ~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp 177 (338)
T 1z41_A 147 KQAAARAKEAGFDVIEIHAAHGYLIHEFLSP 177 (338)
T ss_dssp HHHHHHHHHTTCSEEEEEECTTSHHHHHHCT
T ss_pred HHHHHHHHHcCCCEEEeccccchHHHHccCC
Confidence 999999999999999 9999999999998
No 15
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=100.00 E-value=6.9e-51 Score=359.81 Aligned_cols=185 Identities=38% Similarity=0.589 Sum_probs=160.0
Q ss_pred CCCcCCCCcceeCCeecCCceEeCCCCCCccCCCCCcHHHHHHHHHHhcCCCeEEEecceeccCCCCCCCCCccCCHHHH
Q 037727 20 NNIIPLLTPYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEGGFLISEASVVSETGRGYKHTPGIWTKEQV 99 (205)
Q Consensus 20 ~~~~~Lf~Pi~ig~~~lkNRiv~aPm~~~~~~~g~~t~~~~~~y~~rA~GGGlIi~~~~~V~~~g~~~~~~~~l~~d~~i 99 (205)
|.+++||+|++||+++|||||||+||++.++.+|.||+.+++||.+||. .||||+|+++|++.|..++++++||+|+++
T Consensus 6 m~~~~Lf~P~~ig~~~l~NRiv~aPm~~~~a~~g~pt~~~~~~y~~rA~-~GLiitE~~~v~~~g~~~~~~~gi~~d~~i 84 (377)
T 2r14_A 6 FSNPGLFTPLQLGSLSLPNRVIMAPLTRSRTPDSVPGRLQQIYYGQRAS-AGLIISEATNISPTARGYVYTPGIWTDAQE 84 (377)
T ss_dssp --CCCTTSCEEETTEEESCSEEECCCCCCCCTTSCCCHHHHHHHHHTTT-SSCEEEEEEESSGGGCCBTTCCBSSSHHHH
T ss_pred CChhhcCCCeeECCEEecCCeEECCCcCCcCCCCCCCHHHHHHHHHHhc-CCEEEEcceeeccccccCCCCcccCCHHHH
Confidence 5578999999999999999999999999888889999999999999993 499999999999999999999999999999
Q ss_pred HhHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCC-CCCC----CCCC-CCCCCCCCCCHHHHHHH
Q 037727 100 EAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKN-QPNG----GFNA-AEFTPPRRLRTGEIPQI 173 (205)
Q Consensus 100 ~~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~-~~~~----~~~~-~~~~~~~~mt~~eI~~i 173 (205)
++||+++++||++|+++++||+|+||++.+.....+..+++||+++... .... ...+ .....|++||++||+++
T Consensus 85 ~~~k~l~~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~apS~i~~~~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~~ 164 (377)
T 2r14_A 85 AGWKGVVEAVHAKGGRIALQLWHVGRVSHELVQPDGQQPVAPSALKAEGAECFVEFEDGTAGLHPTSTPRALETDEIPGI 164 (377)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCTTSCCTTTSGGGCCCEESSSCCCTTCEEEEECTTSCEEEEECCCCEECCGGGHHHH
T ss_pred HHHHHHHHHHhhcCCeEEEEccCCccccccccccCCCcccCCCcccccccccccccccccccccCCCCCccCCHHHHHHH
Confidence 9999999999999999999999999998765432356689999887531 0000 0000 01246999999999999
Q ss_pred HHHHHHHHHHHHHccccee---eccchhhhhhcCC
Q 037727 174 VNDFRIAARNAIEAEIKSS---KQLGYVLEIECSY 205 (205)
Q Consensus 174 i~~f~~AA~ra~~AGfDgV---~ahGyLl~qFlSp 205 (205)
+++|++||++|++|||||| +||||||+|||||
T Consensus 165 i~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp 199 (377)
T 2r14_A 165 VEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLAT 199 (377)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHST
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCcccchHHhccCC
Confidence 9999999999999999999 9999999999998
No 16
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=100.00 E-value=5.3e-50 Score=352.76 Aligned_cols=183 Identities=42% Similarity=0.622 Sum_probs=159.3
Q ss_pred CcCCCCcceeCCeecCCceEeCCCCCCcc--CCCCCcHHHHHHHHHHhcCCCeEEEecceeccCCCCCCCCCccCCHHHH
Q 037727 22 IIPLLTPYKMGSFNLSHRIVLAPLSRMRS--YDYIPQPHAILYYSQRTTEGGFLISEASVVSETGRGYKHTPGIWTKEQV 99 (205)
Q Consensus 22 ~~~Lf~Pi~ig~~~lkNRiv~aPm~~~~~--~~g~~t~~~~~~y~~rA~GGGlIi~~~~~V~~~g~~~~~~~~l~~d~~i 99 (205)
|++||+|++||+++|||||||+||++.++ .+|.||+.+++||.+|| |.||||+|+++|++.|..++++++||+|+++
T Consensus 2 ~~~Lf~P~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rA-g~GLiite~~~v~~~g~~~~~~~gi~~d~~i 80 (364)
T 1vyr_A 2 AEKLFTPLKVGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRA-SAGLIISEATQISAQAKGYAGAPGLHSPEQI 80 (364)
T ss_dssp CCSTTSCEEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHHTT-TSSEEEEEEEESSSTTCCSTTCCBSSSHHHH
T ss_pred ccccCCCeeECCEEECCccEECCCCCCcccCCCCCCCHHHHHHHHHHh-cCCEEEEccccccccccCCCCCcccCCHHHH
Confidence 67899999999999999999999999876 68999999999999999 3399999999999999999999999999999
Q ss_pred HhHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCC-CCCC----CCCCCCCCCCHHHHHHHH
Q 037727 100 EAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNG-GFNA----AEFTPPRRLRTGEIPQIV 174 (205)
Q Consensus 100 ~~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~-~~~~----~~~~~~~~mt~~eI~~ii 174 (205)
++||+++++||++|+++++||+|+||++.+.....|..+++||+++....... ...+ .....|++||++||++++
T Consensus 81 ~~~~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~~~g~~~~apS~i~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~~i 160 (364)
T 1vyr_A 81 AAWKKITAGVHAEDGRIAVQLWHTGRISHSSIQPGGQAPVSASALNANTRTSLRDENGNAIRVDTTTPRALELDEIPGIV 160 (364)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCTTSSCGGGSGGGCCCEESSSCCCCSEEEEECTTSCEEEEECCCCEECCGGGHHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEEeccCCcccCcccccCCCccccCCCcccccccccccccccccccCCCCCCcCCHHHHHHHH
Confidence 99999999999999999999999999987653223566899998875310000 0000 122569999999999999
Q ss_pred HHHHHHHHHHHHccccee---eccchhhhhhcCC
Q 037727 175 NDFRIAARNAIEAEIKSS---KQLGYVLEIECSY 205 (205)
Q Consensus 175 ~~f~~AA~ra~~AGfDgV---~ahGyLl~qFlSp 205 (205)
++|++||++|++|||||| +||||||+|||||
T Consensus 161 ~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp 194 (364)
T 1vyr_A 161 NDFRQAVANAREAGFDLVELHSAHGYLLHQFLSP 194 (364)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCCEEEEcCccchHHHhccCC
Confidence 999999999999999999 9999999999997
No 17
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=100.00 E-value=1.1e-49 Score=350.79 Aligned_cols=182 Identities=32% Similarity=0.588 Sum_probs=158.8
Q ss_pred CcCCCCcceeCCeecCCceEeCCCCCCcc--CCCCCcHHHHHHHHHHhcCCCeEEEecceeccCCCCCCCCCccCCHHHH
Q 037727 22 IIPLLTPYKMGSFNLSHRIVLAPLSRMRS--YDYIPQPHAILYYSQRTTEGGFLISEASVVSETGRGYKHTPGIWTKEQV 99 (205)
Q Consensus 22 ~~~Lf~Pi~ig~~~lkNRiv~aPm~~~~~--~~g~~t~~~~~~y~~rA~GGGlIi~~~~~V~~~g~~~~~~~~l~~d~~i 99 (205)
+++||+|++||+++|||||||+||++.++ .+|.||+.+++||.+||. .||||+|+++|++.|..++++++||+|+++
T Consensus 2 ~~~Lf~P~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rA~-~GLiite~~~v~~~g~~~~~~~gi~~d~~i 80 (365)
T 2gou_A 2 TQSLFQPITLGALTLKNRIVMPPMTRSRASQPGDVANHMMAIYYAQRAS-AGLIVSEGTQISPTAKGYAWTPGIYTPEQI 80 (365)
T ss_dssp CTGGGSCEEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHTTTT-SSEEEEEEEESSGGGCCSTTCCBSSSHHHH
T ss_pred ccccCCCeeECCEEEcCceEECCCCCCcccCCCCCCCHHHHHHHHHHhc-CCEEEECceeecccccCCCCCCccCCHHHH
Confidence 57899999999999999999999999876 589999999999999993 499999999999999999999999999999
Q ss_pred HhHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCC-CCC-----CCCCCCCCCCCCCCCCCHHHHHHH
Q 037727 100 EAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPL-KNQ-----PNGGFNAAEFTPPRRLRTGEIPQI 173 (205)
Q Consensus 100 ~~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~-~~~-----~~~~~~~~~~~~~~~mt~~eI~~i 173 (205)
++||+++++||++|+++++||+|+||++.+... .|..+++||+++. ... ..+.........|++||++||+++
T Consensus 81 ~~~~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~-~g~~~~apS~i~~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~~ 159 (365)
T 2gou_A 81 AGWRIVTEAVHAKGCAIFAQLWHVGRVTHPDNI-DGQQPISSSTLKAENVKVFVDNGSDEPGFVDVAVPRAMTKADIAQV 159 (365)
T ss_dssp HHHHHHHHHHHHHSCEEEEEEECCTTSSCGGGT-TTCCCEESSSCCCTTCEEEECCSSSSCEEEECCCCEECCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEEeecCCCccccccc-CCCCccCCCCccccccccccccccccccccCCCCCCcCCHHHHHHH
Confidence 999999999999999999999999999876532 3567899998875 200 000000011256999999999999
Q ss_pred HHHHHHHHHHHHHccccee---eccchhhhhhcCC
Q 037727 174 VNDFRIAARNAIEAEIKSS---KQLGYVLEIECSY 205 (205)
Q Consensus 174 i~~f~~AA~ra~~AGfDgV---~ahGyLl~qFlSp 205 (205)
+++|++||++|++|||||| +||||||+|||||
T Consensus 160 i~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp 194 (365)
T 2gou_A 160 IADYRQAALNAMEAGFDGIELHAANGYLINQFIDS 194 (365)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSG
T ss_pred HHHHHHHHHHHHHcCCCEEEEecccchhHhhccCC
Confidence 9999999999999999999 9999999999997
No 18
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=100.00 E-value=5.4e-47 Score=355.54 Aligned_cols=169 Identities=21% Similarity=0.285 Sum_probs=155.3
Q ss_pred CcCCCCcceeCCeecCCceEeCCCCCCccCCCCCcHHHHHHHHHHhcCC-CeEEEecceeccCCCCCCCCCccCCHHHHH
Q 037727 22 IIPLLTPYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEG-GFLISEASVVSETGRGYKHTPGIWTKEQVE 100 (205)
Q Consensus 22 ~~~Lf~Pi~ig~~~lkNRiv~aPm~~~~~~~g~~t~~~~~~y~~rA~GG-GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~ 100 (205)
|++||+|++||+++|||||+|+||+++++..+.+++.+++||++||+|| ||||+|+++|++.|..+++++++|+|++++
T Consensus 2 ~~~lf~p~~ig~~~l~nRi~~apm~~~~~~~~~~~~~~~~~y~~ra~gg~gliite~~~v~~~~~~~~~~~~~~~~~~~~ 81 (671)
T 1ps9_A 2 YPSLFAPLDLGFTTLKNRVLMGSMHTGLEEYPDGAERLAAFYAERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIP 81 (671)
T ss_dssp CTTTTCCEECSSCEESSSEEECCCCCSCTTSTTHHHHHHHHHHHHHHTTCSEEEEEEEBSSSTTCSBTTCCBCCSGGGHH
T ss_pred ccccCCCeeECCEEEcCceEECCccCCcCCCCCCcHHHHHHHHHHhcCCCCEEEecccccCccccCCCCCCccCCHHHHH
Confidence 7889999999999999999999999876655566899999999999999 999999999999999999999999999999
Q ss_pred hHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 037727 101 AWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDFRIA 180 (205)
Q Consensus 101 ~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~~A 180 (205)
+||+++++||++|+++++||+|+||++.. ..+++||+++.+. ....|++||++||+++|++|++|
T Consensus 82 ~~~~~~~~vh~~g~~i~~Ql~h~Gr~~~~------~~~~~ps~~~~~~---------~~~~p~~~t~~ei~~~i~~~~~a 146 (671)
T 1ps9_A 82 HHRTITEAVHQEGGKIALQILHTGRYSYQ------PHLVAPSALQAPI---------NRFVPHELSHEEILQLIDNFARC 146 (671)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCCGGGSBS------TTCEESSSCCCTT---------CSSCCEECCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCEEEEEeccCCcccCC------CCCcCCCCccccc---------CCCCCccCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999853 2479999877542 12469999999999999999999
Q ss_pred HHHHHHccccee---eccchhhhhhcCC
Q 037727 181 ARNAIEAEIKSS---KQLGYVLEIECSY 205 (205)
Q Consensus 181 A~ra~~AGfDgV---~ahGyLl~qFlSp 205 (205)
|++|++|||||| ++|||||+|||||
T Consensus 147 A~~a~~aGfd~veih~~~gyl~~qFlsp 174 (671)
T 1ps9_A 147 AQLAREAGYDGVEVMGSEGYLINEFLTL 174 (671)
T ss_dssp HHHHHHTTCSEEEEEECBTSHHHHHHCT
T ss_pred HHHHHHcCCCEEEEccccchHHHHhCCC
Confidence 999999999999 9999999999998
No 19
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=100.00 E-value=8.4e-47 Score=357.57 Aligned_cols=174 Identities=16% Similarity=0.149 Sum_probs=155.4
Q ss_pred CCCcCCCCcceeCCeecCCceEeCCCCCCccCCCCCcHHHHHHHHHHhcCC-CeEEEecceeccCCCCCCC-CCccCCHH
Q 037727 20 NNIIPLLTPYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEG-GFLISEASVVSETGRGYKH-TPGIWTKE 97 (205)
Q Consensus 20 ~~~~~Lf~Pi~ig~~~lkNRiv~aPm~~~~~~~g~~t~~~~~~y~~rA~GG-GlIi~~~~~V~~~g~~~~~-~~~l~~d~ 97 (205)
++|++||+|++||+++|||||||+||++.++ ++.|+ .+++||++||+|| ||||+|+++|++.+..++. +++||+|+
T Consensus 4 ~~~~~Lf~p~~ig~~~l~NRiv~apm~~~~~-~~~~~-~~~~~y~~ra~gG~Gliite~~~v~~~~~~~~~~~~~~~~~~ 81 (729)
T 1o94_A 4 PKHDILFEPIQIGPKTLRNRFYQVPHCIGAG-SDKPG-FQSAHRSVKAEGGWAALNTEYCSINPESDDTHRLSARIWDEG 81 (729)
T ss_dssp GGGGGGGSCEEETTEEESSSEEECCCCCSCT-TTCHH-HHHHHHHHHHHTTCSEEEEEEEESSTTSCCTTSCCEECSSHH
T ss_pred CchhhcCCCeeECCEEECCccEECCCcCCcC-CCCcH-HHHHHHHHHhcCCCCEEEEcceEecCcccCCCCCCCccCChH
Confidence 4588999999999999999999999998765 34444 8999999999999 9999999999998887765 58999999
Q ss_pred HHHhHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 037727 98 QVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDF 177 (205)
Q Consensus 98 ~i~~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f 177 (205)
++++|++++++||++|+++++||+|+||++.... .+..+++||+++... .....|++||++||++++++|
T Consensus 82 ~~~~~~~~~~~vh~~g~~i~~Ql~h~Gr~~~~~~--~~~~~~~ps~~~~~~--------~~~~~p~~~t~~eI~~~i~~f 151 (729)
T 1o94_A 82 DVRNLKAMTDEVHKYGALAGVELWYGGAHAPNME--SRATPRGPSQYASEF--------ETLSYCKEMDLSDIAQVQQFY 151 (729)
T ss_dssp HHHHHHHHHHHHHTTTCEEEEEEECCGGGSCCTT--TCCCCEESSCCBCSS--------STTCBCEECCHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHhCCCeEEEEecCCCccccccc--cCCCCcCCCcccccc--------cCCCCCCcCCHHHHHHHHHHH
Confidence 9999999999999999999999999999987653 356789999887542 122569999999999999999
Q ss_pred HHHHHHHHHccccee---eccchhhhhhcCC
Q 037727 178 RIAARNAIEAEIKSS---KQLGYVLEIECSY 205 (205)
Q Consensus 178 ~~AA~ra~~AGfDgV---~ahGyLl~qFlSp 205 (205)
++||+||++|||||| +||||||+|||||
T Consensus 152 ~~aA~~a~~aGfDgVEih~a~gyLl~qFlsp 182 (729)
T 1o94_A 152 VDAAKRSRDAGFDIVYVYGAHSYLPLQFLNP 182 (729)
T ss_dssp HHHHHHHHHTTCSEEEEEECTTCHHHHHHCT
T ss_pred HHHHHHHHHcCCCEEEEccccchHHHHhcCC
Confidence 999999999999999 9999999999998
No 20
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=100.00 E-value=5.1e-46 Score=350.04 Aligned_cols=177 Identities=19% Similarity=0.221 Sum_probs=153.0
Q ss_pred cCCCCcCCCCcceeCCeecCCceEeCCCCCCccCCCCCcH-HHHHHHHHHhcCC-CeEEEecceeccCCCCCCCC-CccC
Q 037727 18 NNNNIIPLLTPYKMGSFNLSHRIVLAPLSRMRSYDYIPQP-HAILYYSQRTTEG-GFLISEASVVSETGRGYKHT-PGIW 94 (205)
Q Consensus 18 ~~~~~~~Lf~Pi~ig~~~lkNRiv~aPm~~~~~~~g~~t~-~~~~~y~~rA~GG-GlIi~~~~~V~~~g~~~~~~-~~l~ 94 (205)
.+.+|++||+|++||+++|||||||+||++.. +.+++ .+..||+.||+|| ||||+|+++|++.+..+++. +++|
T Consensus 7 ~~~~~~~lf~p~~ig~~~l~NRiv~apm~~~~---~~~~~~~~~~~~~~~a~gG~gliite~~~v~~~~~~~~~~~~~~~ 83 (690)
T 3k30_A 7 VAAPYDVLFEPVQIGPFTTKNRFYQVPHCNGM---GYRDPSAQASMRKIKAEGGWSAVCTEQVEIHATSDIAPFIELRIW 83 (690)
T ss_dssp CCTTGGGGGCCCEETTEECSSSEEECCCCCSC---SSSCHHHHHHHHHHHHHTTCSEEEEEEEECSGGGCCTTSCCEECS
T ss_pred ccccchhcCCCeeECCEEECCCeEeCCCcCCC---CCCChHHHHHHHHHHhccCCEEEEecceEeccccccCCCcCCccC
Confidence 34568999999999999999999999998754 33444 4456778899999 99999999999999888874 6999
Q ss_pred CHHHHHhHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 037727 95 TKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIV 174 (205)
Q Consensus 95 ~d~~i~~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii 174 (205)
+|+++++||+++++||++|+++++||+|+||++... ..+..+++||+++..... .....|++||++||+++|
T Consensus 84 ~~~~~~~~~~~~~~vh~~g~~i~~Ql~h~Gr~~~~~--~~~~~~~~ps~~~~~~~~------~~~~~p~~~t~~ei~~~i 155 (690)
T 3k30_A 84 DDQDLPALKRIADAIHEGGGLAGIELAHNGMNAPNQ--LSRETPLGPGHLPVAPDT------IAPIQARAMTKQDIDDLR 155 (690)
T ss_dssp SGGGHHHHHHHHHHHHHTTCEEEEEEECCGGGCCCT--TTCCCCEESSSCBSCSSC------CCSCBCEECCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEccCCccccccc--ccCCCccCCCCCcccccc------cCCCCCCcCCHHHHHHHH
Confidence 999999999999999999999999999999987643 245678999988754210 123568999999999999
Q ss_pred HHHHHHHHHHHHccccee---eccch-hhhhhcCC
Q 037727 175 NDFRIAARNAIEAEIKSS---KQLGY-VLEIECSY 205 (205)
Q Consensus 175 ~~f~~AA~ra~~AGfDgV---~ahGy-Ll~qFlSp 205 (205)
++|++||+||++|||||| +|||| ||+|||||
T Consensus 156 ~~f~~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp 190 (690)
T 3k30_A 156 RWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSK 190 (690)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECTTCSHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCCEEEEcccccchHHHHhCCC
Confidence 999999999999999999 99999 99999998
No 21
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=98.94 E-value=3e-10 Score=97.57 Aligned_cols=86 Identities=20% Similarity=0.166 Sum_probs=65.1
Q ss_pred eecCCceEeCCCCCCccCCCCCcHHHHHHHHHHhcCC-CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHc
Q 037727 34 FNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEG-GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAK 112 (205)
Q Consensus 34 ~~lkNRiv~aPm~~~~~~~g~~t~~~~~~y~~rA~GG-GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~ 112 (205)
++|||||+++||+.. + + ..||..++++| |||++|.+.+++.+.. +. ..|+++ +|..
T Consensus 1 ~~l~nri~~APM~~~-t------~--~~~r~~~~~~G~gli~te~~~~~~~~~~--------~~---~~~~~l---~~~~ 57 (318)
T 1vhn_A 1 MSLEVKVGLAPMAGY-T------D--SAFRTLAFEWGADFAFSEMVSAKGFLMN--------SQ---KTEELL---PQPH 57 (318)
T ss_dssp ----CEEEECCCTTT-C------S--HHHHHHHHTTTCCCEECSCEEHHHHHTT--------CH---HHHHHS---CCTT
T ss_pred CccCCCEEECCCCCC-C------c--HHHHHHHHHHCcCEEEeCCEEEcccccC--------CH---hHHHhh---hCcC
Confidence 579999999999843 2 1 46888888899 9999999888764332 11 357777 8999
Q ss_pred CCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHccccee
Q 037727 113 GGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDFRIAARNAIEAEIKSS 192 (205)
Q Consensus 113 G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~~AA~ra~~AGfDgV 192 (205)
|+++++||+ |+. .++|+++|++|+++ ||+|
T Consensus 58 ~~~~~~QL~--g~~-----------------------------------------------~~~~~~aa~~a~~~-~d~I 87 (318)
T 1vhn_A 58 ERNVAVQIF--GSE-----------------------------------------------PNELSEAARILSEK-YKWI 87 (318)
T ss_dssp CTTEEEEEE--CSC-----------------------------------------------HHHHHHHHHHHTTT-CSEE
T ss_pred CCeEEEEeC--CCC-----------------------------------------------HHHHHHHHHHHHHh-CCEE
Confidence 999999997 420 17899999999999 9999
No 22
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=98.93 E-value=4.6e-10 Score=97.77 Aligned_cols=86 Identities=17% Similarity=0.154 Sum_probs=67.9
Q ss_pred ecCCceEeCCCCCCccCCCCCcHHHHHHHHHHhcCC-CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcC
Q 037727 35 NLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEG-GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKG 113 (205)
Q Consensus 35 ~lkNRiv~aPm~~~~~~~g~~t~~~~~~y~~rA~GG-GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G 113 (205)
+|||||+++||.. +|+....|+ .++.|| |||++|.+.+++. ++++. +++++ +|..+
T Consensus 1 ~l~nriv~APM~g-------~td~~~r~~-~r~~Gg~gli~te~~~~~~~---------~~~~~-----~~~~~-~~~~~ 57 (350)
T 3b0p_A 1 MLDPRLSVAPMVD-------RTDRHFRFL-VRQVSLGVRLYTEMTVDQAV---------LRGNR-----ERLLA-FRPEE 57 (350)
T ss_dssp -CCCSEEECCCTT-------TSSHHHHHH-HHHHCSSSBEECCCEEHHHH---------HHSCH-----HHHHC-CCGGG
T ss_pred CCCCCEEECCCCC-------CCHHHHHHH-HHHcCCCCEEEeCCEEechh---------hcCCH-----HHHhc-cCCCC
Confidence 4899999999982 577878875 577899 9999999887642 23333 46676 79999
Q ss_pred CeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHccccee
Q 037727 114 GIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDFRIAARNAIEAEIKSS 192 (205)
Q Consensus 114 ~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~~AA~ra~~AGfDgV 192 (205)
.++++||. |+ . .++|++||++++++|||+|
T Consensus 58 ~p~~vQL~--g~----------------------------------~-------------p~~~~~aA~~a~~~G~D~I 87 (350)
T 3b0p_A 58 HPIALQLA--GS----------------------------------D-------------PKSLAEAARIGEAFGYDEI 87 (350)
T ss_dssp CSEEEEEE--CS----------------------------------C-------------HHHHHHHHHHHHHTTCSEE
T ss_pred CeEEEEeC--CC----------------------------------C-------------HHHHHHHHHHHHHcCCCEE
Confidence 99999997 21 0 2889999999999999999
No 23
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=98.92 E-value=1.4e-09 Score=93.81 Aligned_cols=112 Identities=13% Similarity=0.067 Sum_probs=80.7
Q ss_pred cceeCCeecCCceEeCCCCCCccCCCCCcHHHHHHHHHHhcCC-CeEEEecceeccC-CCCCCCCCccCCHHHH------
Q 037727 28 PYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEG-GFLISEASVVSET-GRGYKHTPGIWTKEQV------ 99 (205)
Q Consensus 28 Pi~ig~~~lkNRiv~aPm~~~~~~~g~~t~~~~~~y~~rA~GG-GlIi~~~~~V~~~-g~~~~~~~~l~~d~~i------ 99 (205)
|++|++++|||||+++++. ..++ +|++.++++| |+|+++.+.+.+. +...+....+++|+.+
T Consensus 46 ~~~i~g~~l~npi~~aag~---~~~~-------~~~~~~a~~G~g~i~~~~~~~~~~~g~~~pr~~~~~~d~~~in~~g~ 115 (336)
T 1f76_A 46 PVNCMGLTFKNPLGLAAGL---DKDG-------ECIDALGAMGFGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLINRMGF 115 (336)
T ss_dssp CEEETTEEESSSEEECTTS---STTC-------CCHHHHHHTTCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCC
T ss_pred CeEECCEEcCCCcEeCccc---CCcH-------HHHHHHHHcCccEEEeCCCCCCCCCCCCCcceeeccccceeeecCCC
Confidence 8999999999999999753 2222 3899999999 9999999988753 4444555555555432
Q ss_pred --HhHHHHHHHHHHc--CCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 037727 100 --EAWKPIVAEVQAK--GGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVN 175 (205)
Q Consensus 100 --~~l~~l~~~vH~~--G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii~ 175 (205)
++++++++.+|+. +..+++||. | + . .. +|+++++
T Consensus 116 ~~~g~~~~~~~~~~~~~~~~~~v~i~--~-----------------~---------------~-~~-------~i~~~~~ 153 (336)
T 1f76_A 116 NNLGVDNLVENVKKAHYDGVLGINIG--K-----------------N---------------K-DT-------PVEQGKD 153 (336)
T ss_dssp CBCCHHHHHHHHHHCCCCSEEEEEEC--C-----------------C---------------T-TS-------CGGGTHH
T ss_pred CCcCHHHHHHHHHhcccCCcEEEEec--C-----------------C---------------C-CC-------cccccHH
Confidence 4667788888874 345666662 0 0 0 00 2567899
Q ss_pred HHHHHHHHHHHccccee
Q 037727 176 DFRIAARNAIEAEIKSS 192 (205)
Q Consensus 176 ~f~~AA~ra~~AGfDgV 192 (205)
+|+++|+++.+ |||+|
T Consensus 154 ~~~~aa~~~~~-g~d~i 169 (336)
T 1f76_A 154 DYLICMEKIYA-YAGYI 169 (336)
T ss_dssp HHHHHHHHHGG-GCSEE
T ss_pred HHHHHHHHHhc-cCCEE
Confidence 99999999986 99998
No 24
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=98.13 E-value=1.2e-05 Score=68.23 Aligned_cols=46 Identities=11% Similarity=0.112 Sum_probs=36.2
Q ss_pred cceeCCeecCCceEeCCCCCCccCCCCCcHHHHHHHHHHhcCC-CeEEEecceecc
Q 037727 28 PYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEG-GFLISEASVVSE 82 (205)
Q Consensus 28 Pi~ig~~~lkNRiv~aPm~~~~~~~g~~t~~~~~~y~~rA~GG-GlIi~~~~~V~~ 82 (205)
|++|++++|||||++||... +.+ .++++..+++| |+|+++.+.+.+
T Consensus 3 ~~~i~g~~l~npv~~Aag~~--~~~-------~~~~~~~~~~G~g~i~~~~v~~~~ 49 (311)
T 1jub_A 3 NTTFANAKFANPFMNASGVH--CMT-------IEDLEELKASQAGAYITKSSTLEK 49 (311)
T ss_dssp CEEETTEEESSSEEECTTSS--CSS-------HHHHHHHHHSSCSCCBCCCBCSSC
T ss_pred ceEECCEEcCCCcEECCCCC--CCC-------HHHHHHHHHCCCCEEEeCccCCcc
Confidence 68899999999999997431 111 35666778899 999999998876
No 25
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=98.13 E-value=4.1e-06 Score=70.78 Aligned_cols=106 Identities=10% Similarity=0.060 Sum_probs=67.3
Q ss_pred cceeCCeecCCceEeCC-CCCCccCCCCCcHHHHHHHHHHhcCC-CeEEEecceeccCC-CCCC----------CCCccC
Q 037727 28 PYKMGSFNLSHRIVLAP-LSRMRSYDYIPQPHAILYYSQRTTEG-GFLISEASVVSETG-RGYK----------HTPGIW 94 (205)
Q Consensus 28 Pi~ig~~~lkNRiv~aP-m~~~~~~~g~~t~~~~~~y~~rA~GG-GlIi~~~~~V~~~g-~~~~----------~~~~l~ 94 (205)
|++|++++|||||+++| |.. . ++. +.+..+.+| |+++++.+.+.|.. ...+ +..++.
T Consensus 8 ~~~~~g~~l~npi~~aag~~~------~-~~~---~~~~~~~~g~G~~~~~si~~~p~~g~~~p~l~~~~~g~~~~~g~~ 77 (311)
T 1ep3_A 8 SVKLPGLDLKNPIIPASGCFG------F-GEE---YAKYYDLNKLGSIMVKATTLHPRFGNPTPRVAETASGMLNAIGLQ 77 (311)
T ss_dssp CEEETTEEESSSEEECTTSST------T-STT---GGGTSCGGGSSCEEEEEECSSCBCCCCSCCEEEETTEEEECCCCC
T ss_pred ceEECCEECCCCcEECCCCCC------C-CHH---HHHHHHhcCCCEEEeCeeccCccCCCCCCeEEECCcccccccCCC
Confidence 78999999999999999 422 1 111 223344688 99999988776542 2111 233444
Q ss_pred CHHHHHhHHHHHHHHHH-c-CCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 037727 95 TKEQVEAWKPIVAEVQA-K-GGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQ 172 (205)
Q Consensus 95 ~d~~i~~l~~l~~~vH~-~-G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ 172 (205)
+...-..++++.+.+++ . +..+++||.- .
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~p~~v~l~~-------------------------------------~------------ 108 (311)
T 1ep3_A 78 NPGLEVIMTEKLPWLNENFPELPIIANVAG-------------------------------------S------------ 108 (311)
T ss_dssp BCCHHHHHHTHHHHHHHHCTTSCEEEEECC-------------------------------------S------------
T ss_pred CcCHHHHHHHHHHHHHhcCCCCcEEEEEcC-------------------------------------C------------
Confidence 43322222445555665 4 6667777640 0
Q ss_pred HHHHHHHHHHHHHH-ccccee
Q 037727 173 IVNDFRIAARNAIE-AEIKSS 192 (205)
Q Consensus 173 ii~~f~~AA~ra~~-AGfDgV 192 (205)
-+++|+++|+++.+ +|||+|
T Consensus 109 ~~~~~~~~a~~~~~~~g~d~i 129 (311)
T 1ep3_A 109 EEADYVAVCAKIGDAANVKAI 129 (311)
T ss_dssp SHHHHHHHHHHHTTSTTEEEE
T ss_pred CHHHHHHHHHHHhccCCCCEE
Confidence 14679999999999 999999
No 26
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=98.04 E-value=1.3e-06 Score=78.27 Aligned_cols=75 Identities=7% Similarity=-0.043 Sum_probs=50.6
Q ss_pred cceeCCeecCCceEeCCCCCCccCCCCCcHHHHHHHHHHhcCC-CeEEEecceecc-CCCCCCCCCccCCH-HHH-----
Q 037727 28 PYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEG-GFLISEASVVSE-TGRGYKHTPGIWTK-EQV----- 99 (205)
Q Consensus 28 Pi~ig~~~lkNRiv~aPm~~~~~~~g~~t~~~~~~y~~rA~GG-GlIi~~~~~V~~-~g~~~~~~~~l~~d-~~i----- 99 (205)
|++|++++|+|+|++++.... ++ ++|+.+++.| |+|+++.+.+.| .|...|+...+.++ ..|
T Consensus 83 ~~~i~Gl~~~NPvglAAG~dk---~~-------~~~~~l~~~GfG~v~~gtvT~~pq~GNp~PR~~rl~e~~~iiN~~Gf 152 (443)
T 1tv5_A 83 CTNIKHLDFINPFGVAAGFDK---NG-------VCIDSILKLGFSFIEIGTITPRGQTGNAKPRIFRDVESRSIINSCGF 152 (443)
T ss_dssp CEEETTEEESSSEEECTTTTT---TC-------SSHHHHHTTTCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCS
T ss_pred CeEECCEEeCCCcEECCcccC---cc-------HHHHHHHhcCCCEEEEeeeecCCCCCCCCccEEeccccceeeecccc
Confidence 789999999999999986621 11 3577789999 999999988764 44444443333333 222
Q ss_pred --HhHHHHHHHHHHc
Q 037727 100 --EAWKPIVAEVQAK 112 (205)
Q Consensus 100 --~~l~~l~~~vH~~ 112 (205)
+++..+++.+++.
T Consensus 153 nN~G~~~~~~~l~~~ 167 (443)
T 1tv5_A 153 NNMGCDKVTENLILF 167 (443)
T ss_dssp CBSCHHHHHHHHHHH
T ss_pred CChhHHHHHHHHHHH
Confidence 4566666666643
No 27
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=98.04 E-value=9.9e-06 Score=68.84 Aligned_cols=46 Identities=11% Similarity=0.001 Sum_probs=35.9
Q ss_pred cceeCCeecCCceEeCCCCCCccCCCCCcHHHHHHHHHHhcCC-CeEEEecceecc
Q 037727 28 PYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEG-GFLISEASVVSE 82 (205)
Q Consensus 28 Pi~ig~~~lkNRiv~aPm~~~~~~~g~~t~~~~~~y~~rA~GG-GlIi~~~~~V~~ 82 (205)
|++|++++|||+|+++|+.. +.+ .++++..++.| |+|+++.+.+.+
T Consensus 5 ~~~i~g~~l~nPi~~Aag~~--~~~-------~~~~~~~~~~G~g~v~~~~v~~~~ 51 (314)
T 2e6f_A 5 KLNLLDHVFANPFMNAAGVL--CST-------EEDLRCMTASSSGALVSKSCTSAP 51 (314)
T ss_dssp CEEETTEEESSSEEECTTSS--CSS-------HHHHHHHHHSSCSCEECCCBCSSC
T ss_pred ceEECCEecCCCcEECCCCC--CCC-------HHHHHHHHHCCCCEEEeCccCCcc
Confidence 78999999999999998652 111 23455668899 999999988875
No 28
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=95.87 E-value=0.066 Score=46.16 Aligned_cols=46 Identities=13% Similarity=0.177 Sum_probs=32.3
Q ss_pred cceeCCeecCCceEeCCCCCCccCCCCCcHHHHHHHHHHhcCC-CeEEEecceecc
Q 037727 28 PYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEG-GFLISEASVVSE 82 (205)
Q Consensus 28 Pi~ig~~~lkNRiv~aPm~~~~~~~g~~t~~~~~~y~~rA~GG-GlIi~~~~~V~~ 82 (205)
+.++.+++|||.|+.++=. ++. + .++......-| |.|+++.+...|
T Consensus 39 ~~~~~Gl~~~NPv~lAaG~-----~~~-~---~e~~~~~~~~G~G~v~~ktvt~~p 85 (345)
T 3oix_A 39 HTTIGSFDFDNCLMNAAGV-----YCM-T---REELAAIDHSEAGSFVTXTGTLEE 85 (345)
T ss_dssp CEEETTEEESCSEEECTTS-----SCS-S---HHHHHHHHTSSCSBCBCCCBCSSC
T ss_pred CeEECCEECCCCCEEcCCC-----CCC-C---HHHHHHHHHcCCCeEEeeeecCCC
Confidence 5789999999999998532 111 2 23445556778 999998876664
No 29
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=94.24 E-value=0.25 Score=42.71 Aligned_cols=46 Identities=11% Similarity=0.006 Sum_probs=31.8
Q ss_pred cceeCCeecCCceEeCCCCCCccCCCCCcHHHHHHHHHHhcCC-CeEEEecceecc
Q 037727 28 PYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEG-GFLISEASVVSE 82 (205)
Q Consensus 28 Pi~ig~~~lkNRiv~aPm~~~~~~~g~~t~~~~~~y~~rA~GG-GlIi~~~~~V~~ 82 (205)
..++.+++|||-|+.++-.. +. +. ++.+.....| |.|+++.+...+
T Consensus 38 ~~~~~Gl~~~NPv~lAAG~~-----~~-~~---e~~~~l~~~G~G~v~~ktvt~~p 84 (354)
T 4ef8_A 38 QVNLLNNTFANPFMNAAGVM-----CT-TT---EELVAMTESASGSLVSKSCTPAL 84 (354)
T ss_dssp CEEETTEEESSSEEECTTSS-----CS-SH---HHHHHHHHSSCSCEEEEEECSSC
T ss_pred ceEECCEECCCCCEeccCCC-----CC-CH---HHHHHHHHcCCCeEEeCcccCcc
Confidence 47899999999999877432 11 22 3445555668 999998876654
No 30
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=92.69 E-value=0.43 Score=46.54 Aligned_cols=44 Identities=16% Similarity=0.267 Sum_probs=29.5
Q ss_pred ceeCCeecCCceEeCCCCCCccCCCCCcHHHHHHHHHHhcCC-CeEEEecceec
Q 037727 29 YKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEG-GFLISEASVVS 81 (205)
Q Consensus 29 i~ig~~~lkNRiv~aPm~~~~~~~g~~t~~~~~~y~~rA~GG-GlIi~~~~~V~ 81 (205)
+++.+++|+|.|+.+||+... +..+.. .....| |+++++.+...
T Consensus 535 ~~~~G~~~~nPv~lAa~~~~~------~~~~~~---~~~~~g~G~vv~~t~~~~ 579 (1025)
T 1gte_A 535 VEMAGLKFINPFGLASAAPTT------SSSMIR---RAFEAGWGFALTKTFSLD 579 (1025)
T ss_dssp EEETTEEESSSEEECSSGGGS------SHHHHH---HHHHHTCSEEECCCBCCG
T ss_pred eeeccccccCcccccCCCCCC------CHHHHH---HHHHCCcCeEEeceeccc
Confidence 677899999999999997521 123232 222336 99988776654
No 31
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=92.20 E-value=1.8 Score=39.10 Aligned_cols=165 Identities=11% Similarity=-0.020 Sum_probs=82.2
Q ss_pred CCCcceeCCeecCCceEeCCCCCC-cc-C-CCCCcHHHHHHHHHHhc--CC-CeEEEeccee--c---cCC--CCCC--C
Q 037727 25 LLTPYKMGSFNLSHRIVLAPLSRM-RS-Y-DYIPQPHAILYYSQRTT--EG-GFLISEASVV--S---ETG--RGYK--H 89 (205)
Q Consensus 25 Lf~Pi~ig~~~lkNRiv~aPm~~~-~~-~-~g~~t~~~~~~y~~rA~--GG-GlIi~~~~~V--~---~~g--~~~~--~ 89 (205)
.=...+|.+.++++.|+.+||+.. +. + ++ + +.+=+..++ .| ++++++.... . ... ...+ .
T Consensus 177 ~d~st~i~G~~l~~Pi~iAPma~~~l~~~~~~---e--~alaraA~~~~~G~~~~~s~~a~~s~e~v~~~~~~~~~~~~~ 251 (511)
T 1kbi_A 177 VDISTDMLGSHVDVPFYVSATALCKLGNPLEG---E--KDVARGCGQGVTKVPQMISTLASCSPEEIIEAAPSDKQIQWY 251 (511)
T ss_dssp CBCCEEETTEEESSSEEECCCSCGGGTCTTTT---H--HHHHHHHHSSSSCCCEEECTTCSSCHHHHHHTCCCSSCCEEE
T ss_pred ccCccccCCccCCCCeEeccchhccccChhhH---H--HHHHHHHHHhCCCeeEEeCCcccCCHHHHHhhcCCCCCCeEE
Confidence 344678899999999999999863 22 2 22 2 344444456 67 7777655221 1 111 0111 1
Q ss_pred CCccCCHHHHHhHHHHHHHHHHcCCee-eEecccc--cccc---cCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCC
Q 037727 90 TPGIWTKEQVEAWKPIVAEVQAKGGIF-FCQLLHA--GRIS---NRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPR 163 (205)
Q Consensus 90 ~~~l~~d~~i~~l~~l~~~vH~~G~~i-~~QL~H~--Gr~~---~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~ 163 (205)
|+....|. ..++++++.+.+.|+++ ++=+... |++- ...+..... .+.+..........+...-.....-.
T Consensus 252 QLy~~~d~--~~~~~~~~rae~aG~~al~itvd~p~~g~R~~~~r~g~~~p~~-~~~~~~g~~~~~~~g~~~~~~~~~d~ 328 (511)
T 1kbi_A 252 QLYVNSDR--KITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTKA-GPKAMKKTNVEESQGASRALSKFIDP 328 (511)
T ss_dssp EECCCSSH--HHHHHHHHHHHHHTCSCEEEECSCSSCCCCHHHHHHHHTTCC--------CCCCSSCCCGGGGCBTTBCT
T ss_pred EEeecCCH--HHHHHHHHHHHHcCCCEEEEeCCCCCccccHHHHhccCCCCcc-cccccccccccccccHHHHHhhccCh
Confidence 33222332 34677888888889874 5555532 3210 000000000 00000000000000000000001112
Q ss_pred CCCHHHHHHHHHH-----------HHHHHHHHHHccccee--eccch
Q 037727 164 RLRTGEIPQIVND-----------FRIAARNAIEAEIKSS--KQLGY 197 (205)
Q Consensus 164 ~mt~~eI~~ii~~-----------f~~AA~ra~~AGfDgV--~ahGy 197 (205)
.++.++|+++.+. ..+-|++|.++|+|+| ..||.
T Consensus 329 ~~~~~~i~~lr~~~~~PvivKgv~~~e~A~~a~~aGad~I~vs~hgG 375 (511)
T 1kbi_A 329 SLTWKDIEELKKKTKLPIVIKGVQRTEDVIKAAEIGVSGVVLSNHGG 375 (511)
T ss_dssp TCCHHHHHHHHHHCSSCEEEEEECSHHHHHHHHHTTCSEEEECCTTT
T ss_pred HhHHHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHcCCCEEEEcCCCC
Confidence 4678888888875 4677999999999999 66765
No 32
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=91.68 E-value=0.78 Score=39.64 Aligned_cols=158 Identities=15% Similarity=0.071 Sum_probs=80.3
Q ss_pred CCCCcceeCCeecCCceEeCCCCCC-ccCCCCCcHHHHHHHHHHhcCC-CeEEEecceec-----cCCCCCCCCCccCCH
Q 037727 24 PLLTPYKMGSFNLSHRIVLAPLSRM-RSYDYIPQPHAILYYSQRTTEG-GFLISEASVVS-----ETGRGYKHTPGIWTK 96 (205)
Q Consensus 24 ~Lf~Pi~ig~~~lkNRiv~aPm~~~-~~~~g~~t~~~~~~y~~rA~GG-GlIi~~~~~V~-----~~g~~~~~~~~l~~d 96 (205)
..=...+|.+.++++.|+.+||... .+ .+.-+ ..+-+.-++-| ++++++..... ......+...-||-.
T Consensus 67 ~~d~st~i~G~~l~~Pi~iAPma~~g~~---~~~~e-~~la~aa~~~G~~~~~s~~~s~~le~v~~~~~~~~~~~QLy~~ 142 (368)
T 2nli_A 67 APDTSTEILGHKIKAPFIMAPIAAHGLA---HTTKE-AGTARAVSEFGTIMSISAYSGATFEEISEGLNGGPRWFQIYMA 142 (368)
T ss_dssp CCCCCEEETTEEESSSEEECCCSCGGGT---CTTHH-HHHHHHHHHHTCCEEECTTCSSCHHHHHHHHTTCCEEEEECCB
T ss_pred cCCcceEECCEecCCceeecchhhccCC---CcHHH-HHHHHHHHHcCCCEEeechHhHHHHHHHHhCCCCCEEEEEecc
Confidence 3444678899999999999999732 22 12112 34444444557 77777655311 100011111112221
Q ss_pred HHHHhHHHHHHHHHHcCCeee-Eecccc--cccccCCCCCCCC-Cccc-------------cCCCCCCCCCCCCCCCCCC
Q 037727 97 EQVEAWKPIVAEVQAKGGIFF-CQLLHA--GRISNRDFQPNGK-APIS-------------YSDKPLKNQPNGGFNAAEF 159 (205)
Q Consensus 97 ~~i~~l~~l~~~vH~~G~~i~-~QL~H~--Gr~~~~~~~~~g~-~~~~-------------pS~~~~~~~~~~~~~~~~~ 159 (205)
...+...++++.+.+.|++++ +-+.+. |++.. +. ..+. .++. .+...+ ...
T Consensus 143 ~d~~~~~~~~~ra~~aG~~ai~it~d~p~~g~r~~-d~-~~~~~~p~~~~~~~~~~~~~~~g~~l~~----------~~~ 210 (368)
T 2nli_A 143 KDDQQNRDILDEAKSDGATAIILTADSTVSGNRDR-DV-KNKFVYPFGMPIVQRYLRGTAEGMSLNN----------IYG 210 (368)
T ss_dssp SSHHHHHHHHHHHHHTTCSCEEEESBCC---CBC----------CCSCCHHHHHHHTTSGGGC---------------CT
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCCCcccchhH-HH-hhcccCcchhhhhhcccccCCCCchHHh----------hhh
Confidence 122455667777788887643 444443 22211 00 0110 0000 000000 000
Q ss_pred CCCCCCCHHHHHHHHHH-----------HHHHHHHHHHccccee--eccch
Q 037727 160 TPPRRLRTGEIPQIVND-----------FRIAARNAIEAEIKSS--KQLGY 197 (205)
Q Consensus 160 ~~~~~mt~~eI~~ii~~-----------f~~AA~ra~~AGfDgV--~ahGy 197 (205)
..-..++.++|+.+.+. -.+-|++|.++|+|+| ..||.
T Consensus 211 ~~d~~~~~~~i~~lr~~~~~PvivK~v~~~e~a~~a~~~Gad~I~vs~~gg 261 (368)
T 2nli_A 211 ASKQKISPRDIEEIAGHSGLPVFVKGIQHPEDADMAIKRGASGIWVSNHGA 261 (368)
T ss_dssp TBCSBCCHHHHHHHHHHSSSCEEEEEECSHHHHHHHHHTTCSEEEECCGGG
T ss_pred ccCchhhHHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHcCCCEEEEcCCCc
Confidence 11235788889998885 4578999999999999 66664
No 33
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=85.85 E-value=4.9 Score=34.63 Aligned_cols=70 Identities=11% Similarity=-0.011 Sum_probs=39.6
Q ss_pred EeCCCCCCccCCCCCcHHH-HHHHHHHhcCC--CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCeee
Q 037727 41 VLAPLSRMRSYDYIPQPHA-ILYYSQRTTEG--GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFF 117 (205)
Q Consensus 41 v~aPm~~~~~~~g~~t~~~-~~~y~~rA~GG--GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~ 117 (205)
+.+|+.+-+..||.+.... ..+.+...+.| |+++.|.+ | ....+..+|...-++.+++++. ....++
T Consensus 63 i~~alvTPF~~dg~ID~~al~~lv~~li~~Gv~Gl~v~GTT-----G----E~~~Ls~eEr~~vi~~~ve~~~-grvpVi 132 (360)
T 4dpp_A 63 VITAIKTPYLPDGRFDLEAYDDLVNIQIQNGAEGVIVGGTT-----G----EGQLMSWDEHIMLIGHTVNCFG-GSIKVI 132 (360)
T ss_dssp EEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTT-----T----TGGGSCHHHHHHHHHHHHHHHT-TTSEEE
T ss_pred eEEEEeCcCCCCCCcCHHHHHHHHHHHHHcCCCEEEecccc-----c----ChhhCCHHHHHHHHHHHHHHhC-CCCeEE
Confidence 5566666666667666533 33333333455 88777654 2 2344566777777777777663 234555
Q ss_pred Eec
Q 037727 118 CQL 120 (205)
Q Consensus 118 ~QL 120 (205)
+..
T Consensus 133 aGv 135 (360)
T 4dpp_A 133 GNT 135 (360)
T ss_dssp EEC
T ss_pred Eec
Confidence 543
No 34
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=83.62 E-value=0.67 Score=40.20 Aligned_cols=29 Identities=14% Similarity=0.075 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHccccee---ec----cchhhhhhcCC
Q 037727 174 VNDFRIAARNAIEAEIKSS---KQ----LGYVLEIECSY 205 (205)
Q Consensus 174 i~~f~~AA~ra~~AGfDgV---~a----hGyLl~qFlSp 205 (205)
.++|+++|++++++||++| .+ |||+ |+||
T Consensus 153 ~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~---~~s~ 188 (407)
T 2o56_A 153 PEQYAQAALTAVSEGYDAIKVDTVAMDRHGNW---NQQN 188 (407)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCSSBCTTSCB---SCSC
T ss_pred HHHHHHHHHHHHHcCCCEEEEcccccCCcCcc---ccCc
Confidence 3567999999999999999 44 5986 6654
No 35
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=82.98 E-value=0.73 Score=40.00 Aligned_cols=25 Identities=20% Similarity=0.194 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHccccee---ec----cchh
Q 037727 174 VNDFRIAARNAIEAEIKSS---KQ----LGYV 198 (205)
Q Consensus 174 i~~f~~AA~ra~~AGfDgV---~a----hGyL 198 (205)
+++|+++|++++++|||+| .+ |||+
T Consensus 151 ~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~ 182 (410)
T 2gl5_A 151 PEEYAEAARAALDDGYDAIKVDPLEIDRNGDD 182 (410)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECSSSBCTTSCB
T ss_pred HHHHHHHHHHHHHcCCCEEEEeccccCCcccc
Confidence 3567899999999999999 43 7986
No 36
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=82.70 E-value=9.1 Score=33.61 Aligned_cols=46 Identities=7% Similarity=-0.021 Sum_probs=31.9
Q ss_pred CcceeCCeecCCceEeCCCCCCccCCCCCcHHHHHHHHHHhcCC-CeEEEecceecc
Q 037727 27 TPYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEG-GFLISEASVVSE 82 (205)
Q Consensus 27 ~Pi~ig~~~lkNRiv~aPm~~~~~~~g~~t~~~~~~y~~rA~GG-GlIi~~~~~V~~ 82 (205)
-+.++.+++|+|-|+.|+=.. .++. .+....+-| |.|.++.+...|
T Consensus 84 l~v~~~Gl~f~NPvglAAG~d---k~~~-------~~~~l~~lGfG~vevgtvT~~p 130 (415)
T 3i65_A 84 ACTNIKHLDFINPFGVAAGFD---KNGV-------CIDSILKLGFSFIEIGTITPRG 130 (415)
T ss_dssp GCEEETTEEESSSEEECTTSS---TTCS-------SHHHHHTTTCSEEEEEEECSSC
T ss_pred ccEEECCEECCCCCEECCCCC---CCHH-------HHHHHHHcCCCeEEeCcccCCc
Confidence 367899999999999987442 1222 234455667 999998776553
No 37
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=82.43 E-value=0.83 Score=39.58 Aligned_cols=28 Identities=14% Similarity=0.158 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHccccee---ec----cchhhhhhcCC
Q 037727 175 NDFRIAARNAIEAEIKSS---KQ----LGYVLEIECSY 205 (205)
Q Consensus 175 ~~f~~AA~ra~~AGfDgV---~a----hGyLl~qFlSp 205 (205)
++|+++|++++++||+.| .+ |||+ |+||
T Consensus 148 e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~---~~s~ 182 (403)
T 2ox4_A 148 EEYAEEALKAVAEGYDAVKVDVLAHDRNGSR---EGVF 182 (403)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCSSSCTTSCC---TTCC
T ss_pred HHHHHHHHHHHHcCCCEEEEeccccCCcccc---ccCc
Confidence 557899999999999999 43 6885 6654
No 38
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=81.74 E-value=2.5 Score=36.51 Aligned_cols=51 Identities=10% Similarity=0.002 Sum_probs=32.7
Q ss_pred cceeCCeecCCceEeCCCCCCccCCCCCcHHHHHHHHHHhcCC-CeEEEecceecc-CCCCCC
Q 037727 28 PYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEG-GFLISEASVVSE-TGRGYK 88 (205)
Q Consensus 28 Pi~ig~~~lkNRiv~aPm~~~~~~~g~~t~~~~~~y~~rA~GG-GlIi~~~~~V~~-~g~~~~ 88 (205)
+.++.+++|+|-|+.|+=.. .++. . +.....-| |.|+++.+...| .|...|
T Consensus 51 ~~~~~Gl~~~NPvglAaG~~---~~~~---~----~~~~~~~g~G~v~~ktvt~~pq~GNp~P 103 (367)
T 3zwt_A 51 EVRVLGHKFRNPVGIAAGFD---KHGE---A----VDGLYKMGFGFVEIGSVTPKPQEGNPRP 103 (367)
T ss_dssp CEEETTEEESSSEEECTTSS---TTSS---S----HHHHHHTTCSEEEEEEECSSCBCCSCSC
T ss_pred cEEECCEEcCCCCEeCCCcC---CCHH---H----HHHHHhcCcCeEEeCCccCCCCCCCCCC
Confidence 47899999999999986421 2222 1 33333348 999999876654 344333
No 39
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=81.17 E-value=8.9 Score=31.86 Aligned_cols=70 Identities=10% Similarity=0.102 Sum_probs=39.5
Q ss_pred eCCCCCCccCCCCCcHH-HHHHHHHHhcCC--CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCeeeE
Q 037727 42 LAPLSRMRSYDYIPQPH-AILYYSQRTTEG--GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFC 118 (205)
Q Consensus 42 ~aPm~~~~~~~g~~t~~-~~~~y~~rA~GG--GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~~ 118 (205)
.+|+.+-+..||.+... +..+.+.....| |+++.|.+ | ....+..+|...-++.+++++.. ...+++
T Consensus 17 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtT-----G----E~~~Ls~eEr~~v~~~~~~~~~g-rvpVia 86 (301)
T 1xky_A 17 ATAMVTPFDINGNIDFAKTTKLVNYLIDNGTTAIVVGGTT-----G----ESPTLTSEEKVALYRHVVSVVDK-RVPVIA 86 (301)
T ss_dssp EEECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTT-----T----TGGGSCHHHHHHHHHHHHHHHTT-SSCEEE
T ss_pred EEeeECcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccc-----c----ChhhCCHHHHHHHHHHHHHHhCC-CceEEe
Confidence 35555555556666544 334444444555 77777653 2 23445667777777777777642 355665
Q ss_pred ecc
Q 037727 119 QLL 121 (205)
Q Consensus 119 QL~ 121 (205)
...
T Consensus 87 Gvg 89 (301)
T 1xky_A 87 GTG 89 (301)
T ss_dssp ECC
T ss_pred CCC
Confidence 544
No 40
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=81.15 E-value=6.7 Score=32.81 Aligned_cols=71 Identities=11% Similarity=-0.034 Sum_probs=42.3
Q ss_pred EeCCCCCCccCCCCCcHH-HHHHHHHHhcCC--CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCeee
Q 037727 41 VLAPLSRMRSYDYIPQPH-AILYYSQRTTEG--GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFF 117 (205)
Q Consensus 41 v~aPm~~~~~~~g~~t~~-~~~~y~~rA~GG--GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~ 117 (205)
+.+|+.+-+..||.+... +..+.+...+.| |+++.|.+ | ....+..+|..+-++.+++++ ....++
T Consensus 12 v~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtT-----G----E~~~Lt~~Er~~v~~~~v~~~--grvpVi 80 (313)
T 3dz1_A 12 TFAIAPTPFHDDGKIDDVSIDRLTDFYAEVGCEGVTVLGIL-----G----EAPKLDAAEAEAVATRFIKRA--KSMQVI 80 (313)
T ss_dssp EEEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESTGG-----G----TGGGSCHHHHHHHHHHHHHHC--TTSEEE
T ss_pred EEEEeeCCCCCCCCcCHHHHHHHHHHHHHCCCCEEEeCccC-----c----ChhhCCHHHHHHHHHHHHHHc--CCCcEE
Confidence 456666666566666543 333333333455 88877664 2 223456777778888888877 456777
Q ss_pred Eeccc
Q 037727 118 CQLLH 122 (205)
Q Consensus 118 ~QL~H 122 (205)
+....
T Consensus 81 aGvg~ 85 (313)
T 3dz1_A 81 VGVSA 85 (313)
T ss_dssp EECCC
T ss_pred EecCC
Confidence 76543
No 41
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=81.13 E-value=11 Score=31.50 Aligned_cols=72 Identities=11% Similarity=-0.043 Sum_probs=41.6
Q ss_pred EeCCCCCCccCCCCCcHH-HHHHHHHHhcCC--CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCeee
Q 037727 41 VLAPLSRMRSYDYIPQPH-AILYYSQRTTEG--GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFF 117 (205)
Q Consensus 41 v~aPm~~~~~~~g~~t~~-~~~~y~~rA~GG--GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~ 117 (205)
+.+|+.+-+..||.+... +..+.+.....| |+++.|.+ | ....+..+|..+-++.+++.+. ....++
T Consensus 12 v~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtT-----G----E~~~Ls~~Er~~v~~~~~~~~~-grvpvi 81 (309)
T 3fkr_A 12 IFPVVPTTFADTGDLDLASQKRAVDFMIDAGSDGLCILANF-----S----EQFAITDDERDVLTRTILEHVA-GRVPVI 81 (309)
T ss_dssp ECCBCCCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSGG-----G----TGGGSCHHHHHHHHHHHHHHHT-TSSCEE
T ss_pred eEEeeeCCCCcCCCcCHHHHHHHHHHHHHcCCCEEEECccc-----c----CcccCCHHHHHHHHHHHHHHhC-CCCcEE
Confidence 346666666566666543 333333333455 88887764 2 2234567777777777777663 235666
Q ss_pred Eeccc
Q 037727 118 CQLLH 122 (205)
Q Consensus 118 ~QL~H 122 (205)
+...+
T Consensus 82 aGvg~ 86 (309)
T 3fkr_A 82 VTTSH 86 (309)
T ss_dssp EECCC
T ss_pred EecCC
Confidence 66543
No 42
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=80.80 E-value=9.2 Score=31.79 Aligned_cols=70 Identities=10% Similarity=0.025 Sum_probs=39.9
Q ss_pred CCCCCCccCCCCCcHH-HHHHHHHHhcCC--CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCeeeEe
Q 037727 43 APLSRMRSYDYIPQPH-AILYYSQRTTEG--GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQ 119 (205)
Q Consensus 43 aPm~~~~~~~g~~t~~-~~~~y~~rA~GG--GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~~Q 119 (205)
+|+.+-+..||.+... +..+.+.....| |+++.|.+ | ....+..+|...-++.+++++.. ...+++.
T Consensus 17 ~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtT-----G----E~~~Ls~eEr~~v~~~~~~~~~g-rvpViaG 86 (303)
T 2wkj_A 17 AALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGST-----G----EAFVQSLSEREQVLEIVAEEAKG-KIKLIAH 86 (303)
T ss_dssp EECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTT-----T----TGGGSCHHHHHHHHHHHHHHHTT-TSEEEEE
T ss_pred EeeEcCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECeec-----c----ChhhCCHHHHHHHHHHHHHHhCC-CCcEEEe
Confidence 4555545456666544 333444444455 77777653 2 23445667777777777777642 4667766
Q ss_pred ccc
Q 037727 120 LLH 122 (205)
Q Consensus 120 L~H 122 (205)
...
T Consensus 87 vg~ 89 (303)
T 2wkj_A 87 VGC 89 (303)
T ss_dssp CCC
T ss_pred cCC
Confidence 543
No 43
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=80.44 E-value=8.3 Score=31.81 Aligned_cols=69 Identities=7% Similarity=-0.023 Sum_probs=38.3
Q ss_pred EeCCCCCCccCCCCCcHHH-HHHHHHHhcCC--CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCeee
Q 037727 41 VLAPLSRMRSYDYIPQPHA-ILYYSQRTTEG--GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFF 117 (205)
Q Consensus 41 v~aPm~~~~~~~g~~t~~~-~~~y~~rA~GG--GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~ 117 (205)
+.+|+.+-+..|| +.... ..+.+.....| |+++.|.+ | ....+..+|..+-++.+++++.. ..+++
T Consensus 6 v~~a~vTPf~~dg-iD~~~l~~lv~~li~~Gv~gl~~~Gtt-----G----E~~~Ls~~Er~~v~~~~~~~~~g-r~pvi 74 (291)
T 3a5f_A 6 SGVAIITPFTNTG-VDFDKLSELIEWHIKSKTDAIIVCGTT-----G----EATTMTETERKETIKFVIDKVNK-RIPVI 74 (291)
T ss_dssp EEEECCCCBCSSS-BCHHHHHHHHHHHHHTTCCEEEESSGG-----G----TGGGSCHHHHHHHHHHHHHHHTT-SSCEE
T ss_pred eeeeeEcCcCCCC-cCHHHHHHHHHHHHHcCCCEEEECccc-----c----ChhhCCHHHHHHHHHHHHHHhCC-CCcEE
Confidence 3455555555567 66543 34444444555 88777664 2 22345667777777777776642 34455
Q ss_pred Eec
Q 037727 118 CQL 120 (205)
Q Consensus 118 ~QL 120 (205)
+..
T Consensus 75 ~Gv 77 (291)
T 3a5f_A 75 AGT 77 (291)
T ss_dssp EEC
T ss_pred EeC
Confidence 443
No 44
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=79.48 E-value=10 Score=31.80 Aligned_cols=16 Identities=19% Similarity=0.084 Sum_probs=13.5
Q ss_pred HHHHHHHHHHccccee
Q 037727 177 FRIAARNAIEAEIKSS 192 (205)
Q Consensus 177 f~~AA~ra~~AGfDgV 192 (205)
|.+.+++++++|+|+|
T Consensus 77 ~~~~~~~a~~~g~d~V 92 (332)
T 2z6i_A 77 VEDIVDLVIEEGVKVV 92 (332)
T ss_dssp HHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHCCCCEE
Confidence 5677888889999999
No 45
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=78.75 E-value=13 Score=30.30 Aligned_cols=123 Identities=11% Similarity=-0.008 Sum_probs=68.9
Q ss_pred CCCCcHHHHHHHHHHhcCCCeEEEecceeccCCCCC-CCCCccCCHHHHHhHHHHHHHHHHcCCeeeEecccccccccCC
Q 037727 52 DYIPQPHAILYYSQRTTEGGFLISEASVVSETGRGY-KHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRD 130 (205)
Q Consensus 52 ~g~~t~~~~~~y~~rA~GGGlIi~~~~~V~~~g~~~-~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~ 130 (205)
.+.+|+++++.-.+ -+.- .++.-|+.+.. ...-|++-..+...++.+++..|+.|..+++=+---=.+-...
T Consensus 72 E~a~t~emi~ia~~-~kP~------~vtLVPE~r~e~TTegGldv~~~~~~l~~~i~~L~~~GIrVSLFIDpd~~qi~aA 144 (243)
T 1m5w_A 72 EMAVTEEMLAIAVE-TKPH------FCCLVPEKRQEVTTEGGLDVAGQRDKMRDACKRLADAGIQVSLFIDADEEQIKAA 144 (243)
T ss_dssp EECSSHHHHHHHHH-HCCS------EEEECCCCSSCSSCCSCCCSGGGHHHHHHHHHHHHHTTCEEEEEECSCHHHHHHH
T ss_pred ccCCCHHHHHHHHH-cCCC------EEEECCCCCCCcCCCcchhHHhhHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH
Confidence 45678888875433 3432 22222443321 1223444567889999999999999999876553110000000
Q ss_pred CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcccceeeccch
Q 037727 131 FQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDFRIAARNAIEAEIKSSKQLGY 197 (205)
Q Consensus 131 ~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~~AA~ra~~AGfDgV~ahGy 197 (205)
..++...+.... | .....-+..+.+.-++.+.++|+.|.+.|.-.-+|||-
T Consensus 145 ------~~~GA~~IELhT-------G---~Ya~a~~~~~~~~el~~i~~aa~~A~~lGL~VnAGHgL 195 (243)
T 1m5w_A 145 ------AEVGAPFIEIHT-------G---CYADAKTDAEQAQELARIAKAATFAASLGLKVNAGHGL 195 (243)
T ss_dssp ------HHTTCSEEEEEC-------H---HHHHCCSHHHHHHHHHHHHHHHHHHHHTTCEEEEESSC
T ss_pred ------HHhCcCEEEEec-------h---hhhcCCCchhHHHHHHHHHHHHHHHHHcCCEEecCCCC
Confidence 000000011000 0 11233355666778899999999999999854499984
No 46
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=78.31 E-value=11 Score=31.10 Aligned_cols=72 Identities=13% Similarity=0.075 Sum_probs=40.8
Q ss_pred EeCCCCCCccCCCCCcHH-HHHHHHHHhc-CC--CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCee
Q 037727 41 VLAPLSRMRSYDYIPQPH-AILYYSQRTT-EG--GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIF 116 (205)
Q Consensus 41 v~aPm~~~~~~~g~~t~~-~~~~y~~rA~-GG--GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i 116 (205)
+.+|+.+-+..||.+... +..+.+.... .| |+++.|.+ | ....+..+|...-++.+++.+.. ...+
T Consensus 7 v~~a~vTPf~~dg~iD~~~l~~lv~~li~~~Gv~gl~~~Gtt-----G----E~~~Ls~~Er~~v~~~~~~~~~g-rvpv 76 (293)
T 1f6k_A 7 IFSALLVSFNEDGTINEKGLRQIIRHNIDKMKVDGLYVGGST-----G----ENFMLSTEEKKEIFRIAKDEAKD-QIAL 76 (293)
T ss_dssp EEEECCCCBCTTSCBCHHHHHHHHHHHHHTSCCSEEEESSGG-----G----TGGGSCHHHHHHHHHHHHHHHTT-SSEE
T ss_pred eEEeeEcCCCCCCCcCHHHHHHHHHHHHhhCCCcEEEeCccc-----c----chhhCCHHHHHHHHHHHHHHhCC-CCeE
Confidence 345555555556666554 3344444445 56 77777654 2 22345667777777777777642 3556
Q ss_pred eEeccc
Q 037727 117 FCQLLH 122 (205)
Q Consensus 117 ~~QL~H 122 (205)
++....
T Consensus 77 iaGvg~ 82 (293)
T 1f6k_A 77 IAQVGS 82 (293)
T ss_dssp EEECCC
T ss_pred EEecCC
Confidence 665543
No 47
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=78.21 E-value=0.91 Score=39.21 Aligned_cols=26 Identities=12% Similarity=0.077 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHccccee---eccchhhh
Q 037727 175 NDFRIAARNAIEAEIKSS---KQLGYVLE 200 (205)
Q Consensus 175 ~~f~~AA~ra~~AGfDgV---~ahGyLl~ 200 (205)
++|+++|++++++||+.| .+||||.+
T Consensus 139 ~~~~~~a~~~~~~Gf~~vKik~g~~~~g~ 167 (392)
T 2poz_A 139 DEFARAVERPLKEGYGALKFYPLAQRVGS 167 (392)
T ss_dssp HHHHHHTHHHHHTTCSEEEECCCCEEETT
T ss_pred HHHHHHHHHHHHcCCCEEEEecccccccc
Confidence 567899999999999999 89998743
No 48
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=77.76 E-value=16 Score=30.32 Aligned_cols=71 Identities=11% Similarity=0.062 Sum_probs=40.8
Q ss_pred eCCCCCCccCCCCCcHH-HHHHHHHHhcCC--CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCeeeE
Q 037727 42 LAPLSRMRSYDYIPQPH-AILYYSQRTTEG--GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFC 118 (205)
Q Consensus 42 ~aPm~~~~~~~g~~t~~-~~~~y~~rA~GG--GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~~ 118 (205)
.+|+.+.+..||.+... +..+.+.....| |+++.|.+ | ....+..+|...-++.+++.+. ...++++
T Consensus 21 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~Gtt-----G----E~~~Ls~~Er~~v~~~~~~~~~-grvpvia 90 (304)
T 3cpr_A 21 GVAMVTPFTESGDIDIAAGREVAAYLVDKGLDSLVLAGTT-----G----ESPTTTAAEKLELLKAVREEVG-DRAKLIA 90 (304)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTT-----T----TTTTSCHHHHHHHHHHHHHHHT-TTSEEEE
T ss_pred EEeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccc-----c----ChhhCCHHHHHHHHHHHHHHhC-CCCcEEe
Confidence 35555555556666554 333444444555 87777653 2 2334567777777777777764 2356666
Q ss_pred eccc
Q 037727 119 QLLH 122 (205)
Q Consensus 119 QL~H 122 (205)
....
T Consensus 91 Gvg~ 94 (304)
T 3cpr_A 91 GVGT 94 (304)
T ss_dssp ECCC
T ss_pred cCCC
Confidence 6544
No 49
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=77.45 E-value=12 Score=31.80 Aligned_cols=71 Identities=11% Similarity=0.103 Sum_probs=40.4
Q ss_pred EeCCCCCCccCCCCCcHH-HHHHHHHHhcCC--CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCeee
Q 037727 41 VLAPLSRMRSYDYIPQPH-AILYYSQRTTEG--GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFF 117 (205)
Q Consensus 41 v~aPm~~~~~~~g~~t~~-~~~~y~~rA~GG--GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~ 117 (205)
+.+|+.+-+..||.+... +.++.+.....| |+++.|.+ | ....+..+|..+-++.+++++.. ...++
T Consensus 35 v~~alvTPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtT-----G----E~~~Ls~eEr~~vi~~~ve~~~g-rvpVi 104 (343)
T 2v9d_A 35 IIPPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSG-----G----EFSQLGAEERKAIARFAIDHVDR-RVPVL 104 (343)
T ss_dssp ECCEECCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSTT-----T----TGGGSCHHHHHHHHHHHHHHHTT-SSCEE
T ss_pred eEEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccc-----c----ChhhCCHHHHHHHHHHHHHHhCC-CCcEE
Confidence 445555555556666554 333333334455 88877653 2 23446677777777777777642 35566
Q ss_pred Eecc
Q 037727 118 CQLL 121 (205)
Q Consensus 118 ~QL~ 121 (205)
+...
T Consensus 105 aGvg 108 (343)
T 2v9d_A 105 IGTG 108 (343)
T ss_dssp EECC
T ss_pred EecC
Confidence 5544
No 50
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=76.27 E-value=12 Score=31.49 Aligned_cols=72 Identities=8% Similarity=-0.095 Sum_probs=40.6
Q ss_pred EeCCCCCCccCCCCCcHHH-HHHHHHHhcCC--CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCeee
Q 037727 41 VLAPLSRMRSYDYIPQPHA-ILYYSQRTTEG--GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFF 117 (205)
Q Consensus 41 v~aPm~~~~~~~g~~t~~~-~~~y~~rA~GG--GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~ 117 (205)
+.+|+.+-+..||.+.... ..+.+.....| |+++.|.+ | ....+..++...-++.+++++.. ...++
T Consensus 38 v~~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtT-----G----E~~~Ls~eEr~~vi~~~ve~~~g-rvpVi 107 (332)
T 2r8w_A 38 LSAFPITPADEAGRVDIEAFSALIARLDAAEVDSVGILGST-----G----IYMYLTREERRRAIEAAATILRG-RRTLM 107 (332)
T ss_dssp EEECCCCCBCTTCCBCHHHHHHHHHHHHHHTCSEEEESSTT-----T----TGGGSCHHHHHHHHHHHHHHHTT-SSEEE
T ss_pred eeEEeeCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccc-----c----ChhhCCHHHHHHHHHHHHHHhCC-CCcEE
Confidence 4455555555566665543 33333333445 77777653 2 23446677777777777777642 35666
Q ss_pred Eeccc
Q 037727 118 CQLLH 122 (205)
Q Consensus 118 ~QL~H 122 (205)
+....
T Consensus 108 aGvg~ 112 (332)
T 2r8w_A 108 AGIGA 112 (332)
T ss_dssp EEECC
T ss_pred EecCC
Confidence 65543
No 51
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=75.25 E-value=16 Score=30.12 Aligned_cols=71 Identities=13% Similarity=0.061 Sum_probs=39.7
Q ss_pred eCCCCCCccCCCCCcHHH-HHHHHHHhcCC--CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCeeeE
Q 037727 42 LAPLSRMRSYDYIPQPHA-ILYYSQRTTEG--GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFC 118 (205)
Q Consensus 42 ~aPm~~~~~~~g~~t~~~-~~~y~~rA~GG--GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~~ 118 (205)
.+|+.+-+..||.+.... ..+.+...+.| |+++.|.+ | ....+..+|..+-++.+++++.. ...+++
T Consensus 12 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~Gtt-----G----E~~~Ls~~Er~~v~~~~~~~~~g-rvpvia 81 (297)
T 3flu_A 12 LVALITPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGTT-----G----ESATLSVEEHTAVIEAVVKHVAK-RVPVIA 81 (297)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTT-----T----TGGGSCHHHHHHHHHHHHHHHTT-SSCEEE
T ss_pred EEeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccc-----c----CcccCCHHHHHHHHHHHHHHhCC-CCcEEE
Confidence 355555555566665433 33333333455 88877664 2 23445667777777777777642 356666
Q ss_pred eccc
Q 037727 119 QLLH 122 (205)
Q Consensus 119 QL~H 122 (205)
...+
T Consensus 82 Gvg~ 85 (297)
T 3flu_A 82 GTGA 85 (297)
T ss_dssp ECCC
T ss_pred eCCC
Confidence 5443
No 52
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=74.37 E-value=1.6 Score=37.65 Aligned_cols=27 Identities=11% Similarity=-0.096 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHccccee---eccchh
Q 037727 172 QIVNDFRIAARNAIEAEIKSS---KQLGYV 198 (205)
Q Consensus 172 ~ii~~f~~AA~ra~~AGfDgV---~ahGyL 198 (205)
.++++|+++|++++++||+.| .+|+|+
T Consensus 147 ~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~ 176 (392)
T 3p3b_A 147 AAVALMQEEAMQGYAKGQRHFKIKVGRGGR 176 (392)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEECCHHHH
T ss_pred chHHHHHHHHHHHHHhCCCEEEECcCcCcc
Confidence 588999999999999999999 788774
No 53
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=74.20 E-value=18 Score=29.96 Aligned_cols=70 Identities=17% Similarity=0.197 Sum_probs=39.3
Q ss_pred eCCCCCCccCCCCCcHH-HHHHHHHHhcCC--CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCeeeE
Q 037727 42 LAPLSRMRSYDYIPQPH-AILYYSQRTTEG--GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFC 118 (205)
Q Consensus 42 ~aPm~~~~~~~g~~t~~-~~~~y~~rA~GG--GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~~ 118 (205)
.+|+.+-+..||.+... +..+.+.....| |+++.|.+ | ....+..+|...-++.+++++. ....+++
T Consensus 20 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gi~v~Gtt-----G----E~~~Lt~~Er~~v~~~~~~~~~-grvpvia 89 (304)
T 3l21_A 20 LTAMVTPFSGDGSLDTATAARLANHLVDQGCDGLVVSGTT-----G----ESPTTTDGEKIELLRAVLEAVG-DRARVIA 89 (304)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESSTT-----T----TGGGSCHHHHHHHHHHHHHHHT-TTSEEEE
T ss_pred EEEEECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccc-----c----chhhCCHHHHHHHHHHHHHHhC-CCCeEEE
Confidence 35555555556666543 333333334455 78777654 2 2344566777777777777664 2456666
Q ss_pred ecc
Q 037727 119 QLL 121 (205)
Q Consensus 119 QL~ 121 (205)
...
T Consensus 90 Gvg 92 (304)
T 3l21_A 90 GAG 92 (304)
T ss_dssp ECC
T ss_pred eCC
Confidence 543
No 54
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=73.94 E-value=13 Score=30.53 Aligned_cols=70 Identities=10% Similarity=0.041 Sum_probs=39.0
Q ss_pred eCCCCCCccCCCCCcHH-HHHHHHHHhcCC--CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCeeeE
Q 037727 42 LAPLSRMRSYDYIPQPH-AILYYSQRTTEG--GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFC 118 (205)
Q Consensus 42 ~aPm~~~~~~~g~~t~~-~~~~y~~rA~GG--GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~~ 118 (205)
.+|+.+-+. ||.+... +..+.+.....| |+++.|.+ | ....+..+|..+-++.+++++.. ...+++
T Consensus 6 ~~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~~~Gtt-----G----E~~~Ls~~Er~~v~~~~~~~~~g-r~pvia 74 (289)
T 2yxg_A 6 YPAIITPFK-NKEVDFDGLEENINFLIENGVSGIVAVGTT-----G----ESPTLSHEEHKKVIEKVVDVVNG-RVQVIA 74 (289)
T ss_dssp EEBCCCCEE-TTEECHHHHHHHHHHHHHTTCSEEEESSTT-----T----TGGGSCHHHHHHHHHHHHHHHTT-SSEEEE
T ss_pred eeeeecCcC-CCCcCHHHHHHHHHHHHHCCCCEEEECccc-----c----ChhhCCHHHHHHHHHHHHHHhCC-CCcEEE
Confidence 345555445 6665543 333333334455 77777653 2 23445667777777777776642 356666
Q ss_pred eccc
Q 037727 119 QLLH 122 (205)
Q Consensus 119 QL~H 122 (205)
....
T Consensus 75 Gvg~ 78 (289)
T 2yxg_A 75 GAGS 78 (289)
T ss_dssp ECCC
T ss_pred eCCC
Confidence 5543
No 55
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=73.46 E-value=14 Score=30.64 Aligned_cols=123 Identities=8% Similarity=0.009 Sum_probs=67.3
Q ss_pred CCCCcHHHHHHHHHHhcCCCeEEEecceeccCCCCC-CCCCccCCHHHHHhHHHHHHHHHHcCCeeeEecccccccccCC
Q 037727 52 DYIPQPHAILYYSQRTTEGGFLISEASVVSETGRGY-KHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRD 130 (205)
Q Consensus 52 ~g~~t~~~~~~y~~rA~GGGlIi~~~~~V~~~g~~~-~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~ 130 (205)
.+.+|+++++.-.+ -+.- .+..-|+.+.. ...-|++-..+...++.+++..++.|.++.+=+---=.+-...
T Consensus 100 Ema~t~emi~ial~-~kP~------~vtLVPEkreE~TTegGlDv~~~~~~L~~~i~~L~~~GIrVSLFIDpd~~qI~aA 172 (278)
T 3gk0_A 100 ECAVTPEMLDIACE-IRPH------DACLVPEKRSELTTEGGLDVVGHFDAVRAACKQLADAGVRVSLFIDPDEAQIRAA 172 (278)
T ss_dssp EECSSHHHHHHHHH-HCCS------EEEECCCSGGGBCSSSSBCTTTTHHHHHHHHHHHHHTTCEEEEEECSCHHHHHHH
T ss_pred ecCCCHHHHHHHHH-cCCC------EEEECCCCCCCcCCCcchhhhccHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH
Confidence 45568888775433 3332 12222443321 1122344456788999999999999998776442100000000
Q ss_pred CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcccceeeccch
Q 037727 131 FQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDFRIAARNAIEAEIKSSKQLGY 197 (205)
Q Consensus 131 ~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~~AA~ra~~AGfDgV~ahGy 197 (205)
..++...+.... | ....+-+.++.++-++.+.++|+.|.+.|.-.-++||-
T Consensus 173 ------~~~GAd~IELhT-------G---~YA~a~~~~~~~~el~rl~~aA~~A~~lGL~VnAGHGL 223 (278)
T 3gk0_A 173 ------HETGAPVIELHT-------G---RYADAHDAAEQQREFERIATGVDAGIALGLKVNAGHGL 223 (278)
T ss_dssp ------HHHTCSEEEECC-------H---HHHTCSSHHHHHHHHHHHHHHHHHHHHTTCEEEECTTC
T ss_pred ------HHhCcCEEEEec-------c---hhhccCCchhHHHHHHHHHHHHHHHHHcCCEEecCCCC
Confidence 000110011100 0 11233456677888899999999999999854499984
No 56
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=73.32 E-value=14 Score=30.35 Aligned_cols=70 Identities=9% Similarity=0.017 Sum_probs=38.5
Q ss_pred eCCCCCCccCCCCCcHHHHH-HHHHHhcCC--CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCeeeE
Q 037727 42 LAPLSRMRSYDYIPQPHAIL-YYSQRTTEG--GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFC 118 (205)
Q Consensus 42 ~aPm~~~~~~~g~~t~~~~~-~y~~rA~GG--GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~~ 118 (205)
.+|+.+-+..||.+....+. +.+.....| |+++.|.+ | ....+..+|..+-++.+++++.. ...+++
T Consensus 6 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~Gtt-----G----E~~~Ls~~Er~~v~~~~~~~~~g-r~pvia 75 (291)
T 3tak_A 6 IVAIVTPMLKDGGVDWKSLEKLVEWHIEQGTNSIVAVGTT-----G----EASTLSMEEHTQVIKEIIRVANK-RIPIIA 75 (291)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTT-----T----TGGGSCHHHHHHHHHHHHHHHTT-SSCEEE
T ss_pred EeeeECCCCCCCCcCHHHHHHHHHHHHHCCCCEEEECccc-----c----ccccCCHHHHHHHHHHHHHHhCC-CCeEEE
Confidence 45555555556666543322 223323344 88777654 2 23445667777777777777642 355666
Q ss_pred ecc
Q 037727 119 QLL 121 (205)
Q Consensus 119 QL~ 121 (205)
...
T Consensus 76 Gvg 78 (291)
T 3tak_A 76 GTG 78 (291)
T ss_dssp ECC
T ss_pred eCC
Confidence 544
No 57
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=72.51 E-value=11 Score=31.22 Aligned_cols=70 Identities=7% Similarity=-0.012 Sum_probs=39.6
Q ss_pred CCCCCCccCCCCCcHH-HHHHHHHHhcCC--CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCeeeEe
Q 037727 43 APLSRMRSYDYIPQPH-AILYYSQRTTEG--GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQ 119 (205)
Q Consensus 43 aPm~~~~~~~g~~t~~-~~~~y~~rA~GG--GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~~Q 119 (205)
+|+.+-+ .||.+... +..+.+...+.| |+++.|.+ | ....+..+|..+-++.+++++......+++.
T Consensus 14 ~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gl~v~Gtt-----G----E~~~Ls~~Er~~v~~~~~~~~~g~rvpviaG 83 (301)
T 3m5v_A 14 TALITPF-KNGKVDEQSYARLIKRQIENGIDAVVPVGTT-----G----ESATLTHEEHRTCIEIAVETCKGTKVKVLAG 83 (301)
T ss_dssp EECCCCE-ETTEECHHHHHHHHHHHHHTTCCEEECSSTT-----T----TGGGSCHHHHHHHHHHHHHHHTTSSCEEEEE
T ss_pred EeeecCc-CCCCCCHHHHHHHHHHHHHcCCCEEEECccc-----c----ChhhCCHHHHHHHHHHHHHHhCCCCCeEEEe
Confidence 4555545 56655543 333333334455 77776653 2 2344566777777777777765434677776
Q ss_pred ccc
Q 037727 120 LLH 122 (205)
Q Consensus 120 L~H 122 (205)
..+
T Consensus 84 vg~ 86 (301)
T 3m5v_A 84 AGS 86 (301)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 58
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=72.49 E-value=16 Score=30.42 Aligned_cols=70 Identities=13% Similarity=0.139 Sum_probs=39.0
Q ss_pred EeCCCCCCccCCCCCcHH-HHHHHHHHhcCC--CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCeee
Q 037727 41 VLAPLSRMRSYDYIPQPH-AILYYSQRTTEG--GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFF 117 (205)
Q Consensus 41 v~aPm~~~~~~~g~~t~~-~~~~y~~rA~GG--GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~ 117 (205)
+.+|+.+-+..||.+... +..+.+.....| |+++.|.+ | ....+..+|...-++.+++++. ....++
T Consensus 18 i~~alvTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtT-----G----E~~~Ls~~Er~~v~~~~~~~~~-gr~pvi 87 (307)
T 3s5o_A 18 IYPPVTTPFTATAEVDYGKLEENLHKLGTFPFRGFVVQGSN-----G----EFPFLTSSERLEVVSRVRQAMP-KNRLLL 87 (307)
T ss_dssp EECBCCCCBCTTSCBCHHHHHHHHHHHTTSCCSEEEESSGG-----G----TGGGSCHHHHHHHHHHHHHTSC-TTSEEE
T ss_pred eEEeeEccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccc-----c----chhhCCHHHHHHHHHHHHHHcC-CCCcEE
Confidence 457777666667766654 333444445566 88877765 2 2234556666666666555542 234455
Q ss_pred Eec
Q 037727 118 CQL 120 (205)
Q Consensus 118 ~QL 120 (205)
+..
T Consensus 88 aGv 90 (307)
T 3s5o_A 88 AGS 90 (307)
T ss_dssp EEC
T ss_pred Eec
Confidence 544
No 59
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=72.45 E-value=16 Score=30.51 Aligned_cols=69 Identities=13% Similarity=0.045 Sum_probs=38.8
Q ss_pred CCCCCCccCCCCCcHH-HHHHHHHHhcCC--CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCeeeEe
Q 037727 43 APLSRMRSYDYIPQPH-AILYYSQRTTEG--GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQ 119 (205)
Q Consensus 43 aPm~~~~~~~g~~t~~-~~~~y~~rA~GG--GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~~Q 119 (205)
+|+.+-+..||.+... +..+.+...+.| |+++.|.+ | ....+..++...-++.+++.+.. ...+++.
T Consensus 28 ~alvTPf~~dg~iD~~~l~~li~~li~~Gv~Gl~v~GtT-----G----E~~~Ls~~Er~~v~~~~v~~~~g-rvpViaG 97 (315)
T 3si9_A 28 TALITPFDDNGAIDEKAFCNFVEWQITQGINGVSPVGTT-----G----ESPTLTHEEHKRIIELCVEQVAK-RVPVVAG 97 (315)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEECSSTT-----T----TGGGSCHHHHHHHHHHHHHHHTT-SSCBEEE
T ss_pred EeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccc-----c----CccccCHHHHHHHHHHHHHHhCC-CCcEEEe
Confidence 4555555556666543 333333334455 77776653 2 23445677777777777776642 4566665
Q ss_pred cc
Q 037727 120 LL 121 (205)
Q Consensus 120 L~ 121 (205)
..
T Consensus 98 vg 99 (315)
T 3si9_A 98 AG 99 (315)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 60
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=72.12 E-value=12 Score=31.17 Aligned_cols=72 Identities=6% Similarity=-0.176 Sum_probs=41.2
Q ss_pred EeCCCCCCc-cCCCCCcHH-HHHHHHHHhcCC--CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCee
Q 037727 41 VLAPLSRMR-SYDYIPQPH-AILYYSQRTTEG--GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIF 116 (205)
Q Consensus 41 v~aPm~~~~-~~~g~~t~~-~~~~y~~rA~GG--GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i 116 (205)
+.+|+.+.+ ..||.+... +..+.+.....| |+++.|.+ | ....+..+|...-++.+++++.. ...+
T Consensus 15 v~~a~vTPF~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtT-----G----E~~~Ls~eEr~~vi~~~~~~~~g-rvpV 84 (314)
T 3d0c_A 15 ISGINIVPFLEGTREIDWKGLDDNVEFLLQNGIEVIVPNGNT-----G----EFYALTIEEAKQVATRVTELVNG-RATV 84 (314)
T ss_dssp EEECCCCCBCTTTCCBCHHHHHHHHHHHHHTTCSEECTTSGG-----G----TGGGSCHHHHHHHHHHHHHHHTT-SSEE
T ss_pred eEEeeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEECccc-----C----ChhhCCHHHHHHHHHHHHHHhCC-CCeE
Confidence 345555555 556666554 334444444555 77766553 2 23445677777777777777642 4667
Q ss_pred eEeccc
Q 037727 117 FCQLLH 122 (205)
Q Consensus 117 ~~QL~H 122 (205)
++....
T Consensus 85 iaGvg~ 90 (314)
T 3d0c_A 85 VAGIGY 90 (314)
T ss_dssp EEEECS
T ss_pred EecCCc
Confidence 776544
No 61
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=71.79 E-value=9.3 Score=32.32 Aligned_cols=45 Identities=11% Similarity=0.017 Sum_probs=31.0
Q ss_pred cceeCCeecCCceEeCCCCCCccCCCCCcHHHHHHHHHHhcCC-CeEEEecceec
Q 037727 28 PYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEG-GFLISEASVVS 81 (205)
Q Consensus 28 Pi~ig~~~lkNRiv~aPm~~~~~~~g~~t~~~~~~y~~rA~GG-GlIi~~~~~V~ 81 (205)
.+++.+++|||-|+.|+-. ++. + .++....+..| |.|+++.+...
T Consensus 38 ~v~~~Gl~f~NPvglAaG~--~~~----~---~e~~~~l~~~G~G~v~~~tvt~~ 83 (354)
T 3tjx_A 38 QVNLLNNTFANPFMNAAGV--MCT----T---TEELVAMTESASGSLVSKSCTPA 83 (354)
T ss_dssp CEEETTEEESSSEEECTTS--SCS----S---HHHHHHHHHSSCSCEEEEEECSS
T ss_pred eEEECCEEcCCCcEEccCC--CCC----C---HHHHHHHHHcCCCEEEeCCcCcc
Confidence 4788999999999998632 111 2 23555666778 98988876544
No 62
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=71.72 E-value=10 Score=31.33 Aligned_cols=72 Identities=14% Similarity=0.071 Sum_probs=37.9
Q ss_pred EeCCCCCCccCCCCCcHH-HHHHHHHHhcCC--CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCeee
Q 037727 41 VLAPLSRMRSYDYIPQPH-AILYYSQRTTEG--GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFF 117 (205)
Q Consensus 41 v~aPm~~~~~~~g~~t~~-~~~~y~~rA~GG--GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~ 117 (205)
+.+|+.+-+..||.+... +..+.+.....| |+++.|.+ | ....+..+|..+-++.+++++.. ..+++
T Consensus 7 v~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~Gtt-----G----E~~~Ls~~Er~~v~~~~~~~~~g-r~pvi 76 (294)
T 3b4u_A 7 LSAALTTPFKTDGTVDIDAMIAHARRCLSNGCDSVTLFGTT-----G----EGCSVGSRERQAILSSFIAAGIA-PSRIV 76 (294)
T ss_dssp EEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTT-----T----TGGGSCHHHHHHHHHHHHHTTCC-GGGEE
T ss_pred EEEEEECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccc-----c----ChhhCCHHHHHHHHHHHHHHhCC-CCcEE
Confidence 445555555556666543 334444444555 77776653 2 23445666666666666655431 24455
Q ss_pred Eeccc
Q 037727 118 CQLLH 122 (205)
Q Consensus 118 ~QL~H 122 (205)
+....
T Consensus 77 aGvg~ 81 (294)
T 3b4u_A 77 TGVLV 81 (294)
T ss_dssp EEECC
T ss_pred EeCCC
Confidence 55443
No 63
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=71.28 E-value=4.5 Score=33.02 Aligned_cols=42 Identities=12% Similarity=0.116 Sum_probs=26.7
Q ss_pred CcceeCCeecCCceEeCCCCCCccCCCCCcHHHHHHHHHHhcCC-CeEEEec
Q 037727 27 TPYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEG-GFLISEA 77 (205)
Q Consensus 27 ~Pi~ig~~~lkNRiv~aPm~~~~~~~g~~t~~~~~~y~~rA~GG-GlIi~~~ 77 (205)
+|++|++++||||++++.- |.|+.+.. .+...++| =+|.++.
T Consensus 2 ~~~~i~~~~~~~~~~~~t~-------g~p~~~~~--~~~l~~~Gad~ielg~ 44 (264)
T 1xm3_A 2 SMLTIGGKSFQSRLLLGTG-------KYPSFDIQ--KEAVAVSESDILTFAV 44 (264)
T ss_dssp CCEEETTEEESCCEEEECS-------CSSCHHHH--HHHHHHHTCSEEEEET
T ss_pred CCeEECCEEecCCCEEEec-------CCCCHHHH--HHHHHHcCCeEEEEcc
Confidence 5889999999999999653 33443322 23444556 5555553
No 64
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=71.25 E-value=16 Score=30.62 Aligned_cols=71 Identities=8% Similarity=-0.147 Sum_probs=40.6
Q ss_pred EeCCCCCCccCCCCCcHH-HHHHHHHHhcCC--CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCeee
Q 037727 41 VLAPLSRMRSYDYIPQPH-AILYYSQRTTEG--GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFF 117 (205)
Q Consensus 41 v~aPm~~~~~~~g~~t~~-~~~~y~~rA~GG--GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~ 117 (205)
+.+|+.+-+..||.+... +..+.+.....| |+++.|.+ | ....+..+|..+-++.+++++.. ...++
T Consensus 28 v~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gi~v~GtT-----G----E~~~Ls~~Er~~v~~~~v~~~~g-rvpVi 97 (315)
T 3na8_A 28 IIGYTITPFAADGGLDLPALGRSIERLIDGGVHAIAPLGST-----G----EGAYLSDPEWDEVVDFTLKTVAH-RVPTI 97 (315)
T ss_dssp EEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEECSSGG-----G----TGGGSCHHHHHHHHHHHHHHHTT-SSCBE
T ss_pred eEEEeeCcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccc-----c----ChhhCCHHHHHHHHHHHHHHhCC-CCcEE
Confidence 456666666566666543 333333334455 77777654 2 22345667777777777776642 35666
Q ss_pred Eecc
Q 037727 118 CQLL 121 (205)
Q Consensus 118 ~QL~ 121 (205)
+...
T Consensus 98 aGvg 101 (315)
T 3na8_A 98 VSVS 101 (315)
T ss_dssp EECC
T ss_pred EecC
Confidence 6554
No 65
>2ibg_E Protein hedgehog, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: d.65.1.2
Probab=71.20 E-value=2 Score=32.47 Aligned_cols=28 Identities=14% Similarity=0.094 Sum_probs=20.1
Q ss_pred CCCccCCHHHHHhHHHHHHHHHHc--CCee
Q 037727 89 HTPGIWTKEQVEAWKPIVAEVQAK--GGIF 116 (205)
Q Consensus 89 ~~~~l~~d~~i~~l~~l~~~vH~~--G~~i 116 (205)
+...+.+..+-..|..|+..|... |.++
T Consensus 55 g~dR~MT~R~k~kL~~La~~v~~~w~gv~l 84 (150)
T 2ibg_E 55 GADRLMSKRCKEKLNVLAYSVMNEWPGIRL 84 (150)
T ss_dssp ---CEECHHHHHHHHHHHHHHHHHSTTCCE
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHcCCceE
Confidence 345677899999999999999765 5443
No 66
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=70.86 E-value=13 Score=30.86 Aligned_cols=68 Identities=7% Similarity=-0.004 Sum_probs=36.7
Q ss_pred CCCCCCccCCCCCcHH-HHHHHHHHhcCC--CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCeeeEe
Q 037727 43 APLSRMRSYDYIPQPH-AILYYSQRTTEG--GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQ 119 (205)
Q Consensus 43 aPm~~~~~~~g~~t~~-~~~~y~~rA~GG--GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~~Q 119 (205)
+|+.+-+. ||.+... +..+.+.....| |+++.|.+ | ....+..+|...-++.+++++.. ...+++.
T Consensus 19 ~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~v~GtT-----G----E~~~Ls~eEr~~vi~~~~~~~~g-rvpViaG 87 (306)
T 1o5k_A 19 TAIVTPFK-NGELDLESYERLVRYQLENGVNALIVLGTT-----G----ESPTVNEDEREKLVSRTLEIVDG-KIPVIVG 87 (306)
T ss_dssp EECCCCEE-TTEECHHHHHHHHHHHHHTTCCEEEESSGG-----G----TGGGCCHHHHHHHHHHHHHHHTT-SSCEEEE
T ss_pred eeeecCcC-CCCcCHHHHHHHHHHHHHcCCCEEEeCccc-----c----chhhCCHHHHHHHHHHHHHHhCC-CCeEEEc
Confidence 33333334 6655543 333344344455 88777664 2 22345667777777777776642 3456655
Q ss_pred cc
Q 037727 120 LL 121 (205)
Q Consensus 120 L~ 121 (205)
..
T Consensus 88 vg 89 (306)
T 1o5k_A 88 AG 89 (306)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 67
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=70.33 E-value=18 Score=29.77 Aligned_cols=70 Identities=10% Similarity=0.004 Sum_probs=39.6
Q ss_pred eCCCCCCccCCCCCcHH-HHHHHHHHhcCC--CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCeeeE
Q 037727 42 LAPLSRMRSYDYIPQPH-AILYYSQRTTEG--GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFC 118 (205)
Q Consensus 42 ~aPm~~~~~~~g~~t~~-~~~~y~~rA~GG--GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~~ 118 (205)
.+|+.+-+. ||.+... +..+.+.....| |+++.|.+ | ....+..+|...-++.+++.+.. ..++++
T Consensus 6 ~~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~~~Gtt-----G----E~~~Ls~~Er~~v~~~~~~~~~g-rvpvia 74 (294)
T 2ehh_A 6 IVALITPFK-EGEVDYEALGNLIEFHVDNGTDAILVCGTT-----G----ESPTLTFEEHEKVIEFAVKRAAG-RIKVIA 74 (294)
T ss_dssp EEECCCCEE-TTEECHHHHHHHHHHHHTTTCCEEEESSTT-----T----TGGGSCHHHHHHHHHHHHHHHTT-SSEEEE
T ss_pred eeeeecCcC-CCCcCHHHHHHHHHHHHHCCCCEEEECccc-----c----ChhhCCHHHHHHHHHHHHHHhCC-CCcEEE
Confidence 345555445 6665544 334444444556 77777653 2 23445677777777777777642 356666
Q ss_pred eccc
Q 037727 119 QLLH 122 (205)
Q Consensus 119 QL~H 122 (205)
....
T Consensus 75 Gvg~ 78 (294)
T 2ehh_A 75 GTGG 78 (294)
T ss_dssp ECCC
T ss_pred ecCC
Confidence 5543
No 68
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=70.22 E-value=10 Score=31.41 Aligned_cols=70 Identities=10% Similarity=0.049 Sum_probs=38.9
Q ss_pred eCCCCCCccCCCCCcHH-HHHHHHHHhcCC--CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCeeeE
Q 037727 42 LAPLSRMRSYDYIPQPH-AILYYSQRTTEG--GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFC 118 (205)
Q Consensus 42 ~aPm~~~~~~~g~~t~~-~~~~y~~rA~GG--GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~~ 118 (205)
.+|+.+.+ .||.+... +.++.+...+.| |+++.|.+ | ....+..+|...-++.+++++.. ...+++
T Consensus 6 ~~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gi~v~Gtt-----G----E~~~Ls~~Er~~v~~~~~~~~~g-rvpvia 74 (297)
T 2rfg_A 6 LIAMITPF-INGQVDEKALAGLVDWQIKHGAHGLVPVGTT-----G----ESPTLTEEEHKRVVALVAEQAQG-RVPVIA 74 (297)
T ss_dssp EEECCCCE-ETTEECHHHHHHHHHHHHHTTCSEEECSSGG-----G----TGGGSCHHHHHHHHHHHHHHHTT-SSCBEE
T ss_pred EEeeecCc-CCCCcCHHHHHHHHHHHHHcCCCEEEECccc-----c----chhhCCHHHHHHHHHHHHHHhCC-CCeEEE
Confidence 34555545 56665543 333333334455 77776654 2 22345667777777777777642 355666
Q ss_pred eccc
Q 037727 119 QLLH 122 (205)
Q Consensus 119 QL~H 122 (205)
....
T Consensus 75 Gvg~ 78 (297)
T 2rfg_A 75 GAGS 78 (297)
T ss_dssp ECCC
T ss_pred ccCC
Confidence 5543
No 69
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=69.86 E-value=17 Score=30.47 Aligned_cols=70 Identities=11% Similarity=0.050 Sum_probs=40.0
Q ss_pred eCCCCCCcc-CCCCCcH-HHHHHHHHHhcCC--CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCeee
Q 037727 42 LAPLSRMRS-YDYIPQP-HAILYYSQRTTEG--GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFF 117 (205)
Q Consensus 42 ~aPm~~~~~-~~g~~t~-~~~~~y~~rA~GG--GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~ 117 (205)
.+|+.+-+. .||.+.. .+..+.+.....| |+++.|.+ | ....+..+|...-++.+++++. ....++
T Consensus 15 ~~a~vTPf~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtT-----G----E~~~Ls~~Er~~v~~~~~~~~~-grvpvi 84 (318)
T 3qfe_A 15 WCPAVTFFDSKTDTLDLASQERYYAYLARSGLTGLVILGTN-----A----EAFLLTREERAQLIATARKAVG-PDFPIM 84 (318)
T ss_dssp EEECCCCEETTTTEECHHHHHHHHHHHHTTTCSEEEESSGG-----G----TGGGSCHHHHHHHHHHHHHHHC-TTSCEE
T ss_pred EEeeeCCccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccc-----c----ChhhCCHHHHHHHHHHHHHHhC-CCCcEE
Confidence 345555555 5666554 3344444444556 88887764 2 2234566777777777777762 235666
Q ss_pred Eecc
Q 037727 118 CQLL 121 (205)
Q Consensus 118 ~QL~ 121 (205)
+...
T Consensus 85 aGvg 88 (318)
T 3qfe_A 85 AGVG 88 (318)
T ss_dssp EECC
T ss_pred EeCC
Confidence 6544
No 70
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=67.90 E-value=19 Score=29.84 Aligned_cols=71 Identities=10% Similarity=0.020 Sum_probs=39.8
Q ss_pred EeCCCCCCccCCCCCcHHH-HHHHHHHhcCC--CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCeee
Q 037727 41 VLAPLSRMRSYDYIPQPHA-ILYYSQRTTEG--GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFF 117 (205)
Q Consensus 41 v~aPm~~~~~~~g~~t~~~-~~~y~~rA~GG--GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~ 117 (205)
+.+|+.+-+..||.+.... ..+.+.....| |+++.|.+ | ....+..+|...-++.+++++. ....++
T Consensus 8 v~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~Gtt-----G----E~~~Ls~~Er~~v~~~~~~~~~-grvpvi 77 (300)
T 3eb2_A 8 VFPYLVSPVDAEGRVRADVMGRLCDDLIQAGVHGLTPLGST-----G----EFAYLGTAQREAVVRATIEAAQ-RRVPVV 77 (300)
T ss_dssp EEEBCCCCBCTTSCBCHHHHHHHHHHHHHTTCSCBBTTSGG-----G----TGGGCCHHHHHHHHHHHHHHHT-TSSCBE
T ss_pred eEEEEeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccc-----c----CccccCHHHHHHHHHHHHHHhC-CCCcEE
Confidence 4456666665666665433 33333333455 88777654 2 2234566777777777777763 234566
Q ss_pred Eecc
Q 037727 118 CQLL 121 (205)
Q Consensus 118 ~QL~ 121 (205)
+...
T Consensus 78 aGvg 81 (300)
T 3eb2_A 78 AGVA 81 (300)
T ss_dssp EEEE
T ss_pred EeCC
Confidence 6543
No 71
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=66.30 E-value=6.1 Score=31.76 Aligned_cols=20 Identities=15% Similarity=0.012 Sum_probs=16.0
Q ss_pred HHHHHHHHHccccee-eccch
Q 037727 178 RIAARNAIEAEIKSS-KQLGY 197 (205)
Q Consensus 178 ~~AA~ra~~AGfDgV-~ahGy 197 (205)
..+++.|.+||.|.| ..-||
T Consensus 131 ~~a~~ia~eaGADfVKTSTGf 151 (226)
T 1vcv_A 131 YTLYDIIAEAGAHFIKSSTGF 151 (226)
T ss_dssp HHHHHHHHHHTCSEEECCCSC
T ss_pred HHHHHHHHHcCCCEEEeCCCC
Confidence 378889999999999 55554
No 72
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=66.20 E-value=12 Score=30.84 Aligned_cols=70 Identities=11% Similarity=0.049 Sum_probs=38.5
Q ss_pred eCCCCCCccCCCCCcHH-HHHHHHHHhcCC--CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCeeeE
Q 037727 42 LAPLSRMRSYDYIPQPH-AILYYSQRTTEG--GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFC 118 (205)
Q Consensus 42 ~aPm~~~~~~~g~~t~~-~~~~y~~rA~GG--GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~~ 118 (205)
.+|+.+-+ .||.+... +..+.+.....| |+++.|.+ | ....+..+|...-++.+++.+.. ...+++
T Consensus 6 ~~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gl~~~Gtt-----G----E~~~Ls~~Er~~v~~~~~~~~~g-r~pvia 74 (292)
T 2vc6_A 6 ITALVTPF-ADDRIDEVALHDLVEWQIEEGSFGLVPCGTT-----G----ESPTLSKSEHEQVVEITIKTANG-RVPVIA 74 (292)
T ss_dssp EEECCCCE-ETTEECHHHHHHHHHHHHHTTCSEEETTSGG-----G----TGGGSCHHHHHHHHHHHHHHHTT-SSCBEE
T ss_pred EEeeecCc-CCCCcCHHHHHHHHHHHHHcCCCEEEECccc-----c----ChhhCCHHHHHHHHHHHHHHhCC-CCcEEE
Confidence 34555545 56665543 333334344455 77766653 2 23345667777777777777642 355665
Q ss_pred eccc
Q 037727 119 QLLH 122 (205)
Q Consensus 119 QL~H 122 (205)
....
T Consensus 75 Gvg~ 78 (292)
T 2vc6_A 75 GAGS 78 (292)
T ss_dssp ECCC
T ss_pred ecCC
Confidence 5543
No 73
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=64.96 E-value=33 Score=28.55 Aligned_cols=71 Identities=10% Similarity=0.065 Sum_probs=39.9
Q ss_pred EeCCCCCCccCCCCCcHHHHHHH-HHHhcCC--CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCeee
Q 037727 41 VLAPLSRMRSYDYIPQPHAILYY-SQRTTEG--GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFF 117 (205)
Q Consensus 41 v~aPm~~~~~~~g~~t~~~~~~y-~~rA~GG--GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~ 117 (205)
+.+|+.+-+..||.+....+.-+ +...+.| |+++.|.+ | ....+..+|..+-++.+++.+.. ...++
T Consensus 27 v~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtT-----G----E~~~Ls~~Er~~v~~~~v~~~~g-rvpVi 96 (314)
T 3qze_A 27 SMVALVTPFDAQGRLDWDSLAKLVDFHLQEGTNAIVAVGTT-----G----ESATLDVEEHIQVIRRVVDQVKG-RIPVI 96 (314)
T ss_dssp EEEECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSGG-----G----TGGGCCHHHHHHHHHHHHHHHTT-SSCEE
T ss_pred eEEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccc-----c----ChhhCCHHHHHHHHHHHHHHhCC-CCcEE
Confidence 44566666656676665433333 3333444 88887764 2 22345667777777777777642 35566
Q ss_pred Eecc
Q 037727 118 CQLL 121 (205)
Q Consensus 118 ~QL~ 121 (205)
+...
T Consensus 97 aGvg 100 (314)
T 3qze_A 97 AGTG 100 (314)
T ss_dssp EECC
T ss_pred EeCC
Confidence 6543
No 74
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=63.60 E-value=12 Score=30.77 Aligned_cols=68 Identities=9% Similarity=0.103 Sum_probs=35.7
Q ss_pred eCCCCCCccCCCCCcHH-HHHHHHHHhcCC--CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCeeeE
Q 037727 42 LAPLSRMRSYDYIPQPH-AILYYSQRTTEG--GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFC 118 (205)
Q Consensus 42 ~aPm~~~~~~~g~~t~~-~~~~y~~rA~GG--GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~~ 118 (205)
.+|+.+.+..||.+... +..+.+.....| |+++.|.+ | ....+..+|...-++.+++++. | +++
T Consensus 4 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtT-----G----E~~~Ls~eEr~~v~~~~~~~~~--g--Via 70 (288)
T 2nuw_A 4 ISPIITPFDKQGKVNVDALKTHAKNLLEKGIDAIFVNGTT-----G----LGPALSKDEKRQNLNALYDVTH--K--LIF 70 (288)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEETSTT-----T----TGGGSCHHHHHHHHHHHTTTCS--C--EEE
T ss_pred EEeeecCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccc-----c----ChhhCCHHHHHHHHHHHHHHhC--C--eEE
Confidence 45555555556666544 333334344455 77776653 2 2334556666666665555433 3 555
Q ss_pred eccc
Q 037727 119 QLLH 122 (205)
Q Consensus 119 QL~H 122 (205)
....
T Consensus 71 Gvg~ 74 (288)
T 2nuw_A 71 QVGS 74 (288)
T ss_dssp ECCC
T ss_pred eeCC
Confidence 5443
No 75
>3k7i_B IHH, HHG-2, indian hedgehog protein; alpha+beta sandwich, autocatalytic cleavage, cell membrane, developmental protein, disease mutation; 1.44A {Homo sapiens} PDB: 3k7g_B 3k7j_B 3k7h_B 3n1f_A 3n1m_B 3n1o_A 3n1p_B 3m1n_A 3mxw_A 3ho5_H 1vhh_A 3d1m_A 3n1r_A 2wg4_A 2wfx_A 2wfq_A 2wfr_A 2wg3_A*
Probab=62.82 E-value=3.8 Score=31.92 Aligned_cols=24 Identities=8% Similarity=0.115 Sum_probs=19.8
Q ss_pred CCCccCCHHHHHhHHHHHHHHHHc
Q 037727 89 HTPGIWTKEQVEAWKPIVAEVQAK 112 (205)
Q Consensus 89 ~~~~l~~d~~i~~l~~l~~~vH~~ 112 (205)
+.-.+.+..+.+.|..|+..|...
T Consensus 83 gadR~Mt~Rc~~kL~~La~~V~nq 106 (187)
T 3k7i_B 83 GADRLMTQRCKDRLNSLAISVMNQ 106 (187)
T ss_dssp SGGGEECHHHHHHHHHHHHHHHHH
T ss_pred CcchhhCHHHHHHHHHHHHHHHHh
Confidence 345667889999999999999874
No 76
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=61.96 E-value=17 Score=29.81 Aligned_cols=66 Identities=15% Similarity=0.184 Sum_probs=35.1
Q ss_pred eCCCCCCccCCCCCcHH-HHHHHHHHhcCC--CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCeeeE
Q 037727 42 LAPLSRMRSYDYIPQPH-AILYYSQRTTEG--GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFC 118 (205)
Q Consensus 42 ~aPm~~~~~~~g~~t~~-~~~~y~~rA~GG--GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~~ 118 (205)
.+|+.+-+. ||.+... +..+.+.....| |+++.|.+ | ....+..++...-++.+++++. | +++
T Consensus 4 ~~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~v~Gtt-----G----E~~~Ls~~Er~~v~~~~~~~~~--g--vi~ 69 (286)
T 2r91_A 4 VAPVITTFR-GGRLDPELFANHVKNITSKGVDVVFVAGTT-----G----LGPALSLQEKMELTDAATSAAR--R--VIV 69 (286)
T ss_dssp EEECCCCEE-TTEECHHHHHHHHHHHHHTTCCEEEETSTT-----T----TGGGSCHHHHHHHHHHHHHHCS--S--EEE
T ss_pred EEeEecCcC-CCccCHHHHHHHHHHHHHCCCCEEEECccc-----c----ChhhCCHHHHHHHHHHHHHHhC--C--EEE
Confidence 345555444 6655543 333333334455 77776653 2 2344566776666776666543 3 555
Q ss_pred ecc
Q 037727 119 QLL 121 (205)
Q Consensus 119 QL~ 121 (205)
...
T Consensus 70 Gvg 72 (286)
T 2r91_A 70 QVA 72 (286)
T ss_dssp ECC
T ss_pred eeC
Confidence 543
No 77
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=61.02 E-value=5.3 Score=32.11 Aligned_cols=30 Identities=7% Similarity=-0.001 Sum_probs=28.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHccccee
Q 037727 163 RRLRTGEIPQIVNDFRIAARNAIEAEIKSS 192 (205)
Q Consensus 163 ~~mt~~eI~~ii~~f~~AA~ra~~AGfDgV 192 (205)
..+|.+++.++.+.+.++|++...+|+|.|
T Consensus 41 ~~~t~e~l~~~~~~l~~aa~~L~~ag~d~i 70 (240)
T 3ixl_A 41 GSVTPEGYDAVIESVVDHARRLQKQGAAVV 70 (240)
T ss_dssp CCSSHHHHHHHGGGHHHHHHHHHHTTEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHHhccCCCCEE
Confidence 468999999999999999999999999999
No 78
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=58.89 E-value=35 Score=28.02 Aligned_cols=68 Identities=10% Similarity=0.031 Sum_probs=36.7
Q ss_pred CCCCCCccCCCCCcH-HHHHHHHHHhcCC--CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCeeeEe
Q 037727 43 APLSRMRSYDYIPQP-HAILYYSQRTTEG--GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQ 119 (205)
Q Consensus 43 aPm~~~~~~~g~~t~-~~~~~y~~rA~GG--GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~~Q 119 (205)
+|+.+-+..| .+.. .+..+.+...+.| |+++.|.+ | ....+..+|...-++.+++++. ....+++.
T Consensus 9 ~a~vTPf~~d-~iD~~~l~~lv~~li~~Gv~gl~v~Gtt-----G----E~~~Lt~~Er~~v~~~~~~~~~-grvpviaG 77 (292)
T 3daq_A 9 VALTTPFTNN-KVNLEALKAHVNFLLENNAQAIIVNGTT-----A----ESPTLTTDEKELILKTVIDLVD-KRVPVIAG 77 (292)
T ss_dssp EECCCCEETT-EECHHHHHHHHHHHHHTTCCEEEESSGG-----G----TGGGSCHHHHHHHHHHHHHHHT-TSSCEEEE
T ss_pred EeeecCcCCC-CcCHHHHHHHHHHHHHcCCCEEEECccc-----c----ccccCCHHHHHHHHHHHHHHhC-CCCcEEEe
Confidence 4444444334 4443 3333333333455 88877764 2 2234566777777777777763 33566665
Q ss_pred cc
Q 037727 120 LL 121 (205)
Q Consensus 120 L~ 121 (205)
..
T Consensus 78 vg 79 (292)
T 3daq_A 78 TG 79 (292)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 79
>3k67_A Putative dehydratase AF1124; hypothetical protein AF1124, structural genomics, PSI, protein structure initiative; 1.25A {Archaeoglobus fulgidus} PDB: 2b3m_A
Probab=57.45 E-value=2.8 Score=31.69 Aligned_cols=44 Identities=9% Similarity=-0.104 Sum_probs=31.6
Q ss_pred CCCCCCHHHHHHHHHHHHH------HHHHHHHcccceeeccchhhhhhcC
Q 037727 161 PPRRLRTGEIPQIVNDFRI------AARNAIEAEIKSSKQLGYVLEIECS 204 (205)
Q Consensus 161 ~~~~mt~~eI~~ii~~f~~------AA~ra~~AGfDgV~ahGyLl~qFlS 204 (205)
..|.+|++||......-.+ -...|+++||.++-+||+|...++|
T Consensus 44 ~~rtiT~~di~~FA~~sGD~nPiH~D~e~A~~~gf~~~IahG~l~~sl~~ 93 (159)
T 3k67_A 44 YEKKLCEIDVAMFGLISGDLNPVHFDEDFASKTRFGGRVVHGMLTTSLVS 93 (159)
T ss_dssp EEEECCHHHHHHHHHHHCCCCGGGTCHHHHHHSTTSSCCCCHHHHHHHHH
T ss_pred EEEEEcHHHHHHHHHHHCCCCccccCHHHHhhCCCCCceecHHHHHHHHH
Confidence 3578999998765543221 1357788999999999998776653
No 80
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=56.71 E-value=6.3 Score=33.58 Aligned_cols=24 Identities=13% Similarity=0.069 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHccccee---eccch
Q 037727 174 VNDFRIAARNAIEAEIKSS---KQLGY 197 (205)
Q Consensus 174 i~~f~~AA~ra~~AGfDgV---~ahGy 197 (205)
.++|+++|++++++||+.| .+|+|
T Consensus 150 ~e~~~~~a~~~~~~Gf~~iKik~g~~~ 176 (382)
T 1rvk_A 150 PEDYGRFAETLVKRGYKGIKLHTWMPP 176 (382)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCCTT
T ss_pred HHHHHHHHHHHHHCCCCEEEEcCCcCc
Confidence 4668999999999999999 77765
No 81
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=56.08 E-value=21 Score=29.77 Aligned_cols=24 Identities=8% Similarity=0.014 Sum_probs=20.0
Q ss_pred HHHHHhHHHHHHHHHHcCCeeeEe
Q 037727 96 KEQVEAWKPIVAEVQAKGGIFFCQ 119 (205)
Q Consensus 96 d~~i~~l~~l~~~vH~~G~~i~~Q 119 (205)
++.++.++++++++|++|.++++.
T Consensus 154 ~~~l~~i~~v~~~a~~~GlpvIie 177 (295)
T 3glc_A 154 HQSIKNIIQLVDAGMKVGMPTMAV 177 (295)
T ss_dssp HHHHHHHHHHHHHHHTTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEE
Confidence 467888999999999999887764
No 82
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=56.00 E-value=35 Score=27.24 Aligned_cols=24 Identities=13% Similarity=-0.029 Sum_probs=18.2
Q ss_pred HHHHHhHHHHHHHHHHcCCeeeEe
Q 037727 96 KEQVEAWKPIVAEVQAKGGIFFCQ 119 (205)
Q Consensus 96 d~~i~~l~~l~~~vH~~G~~i~~Q 119 (205)
++.++..+++++.+|++|.++++.
T Consensus 128 ~~~~~~~~~v~~~~~~~g~~viv~ 151 (273)
T 2qjg_A 128 WEAYRDLGMIAETCEYWGMPLIAM 151 (273)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEE
Confidence 345667888888888888887774
No 83
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=55.51 E-value=13 Score=33.60 Aligned_cols=29 Identities=24% Similarity=0.324 Sum_probs=24.3
Q ss_pred HHhHHHHHHHHHHcCCeeeEec--ccccccc
Q 037727 99 VEAWKPIVAEVQAKGGIFFCQL--LHAGRIS 127 (205)
Q Consensus 99 i~~l~~l~~~vH~~G~~i~~QL--~H~Gr~~ 127 (205)
.+.||++++++|+.|.++++-+ +|.+...
T Consensus 167 ~~d~~~lv~~~h~~Gi~VilD~V~NH~~~~~ 197 (558)
T 3vgf_A 167 PEGFRKLVDEAHKKGLGVILDVVYNHVGPEG 197 (558)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSCCCSSS
T ss_pred HHHHHHHHHHHHHcCCEEEEEEeeccccCCC
Confidence 6789999999999999998864 6777543
No 84
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=54.92 E-value=29 Score=29.10 Aligned_cols=20 Identities=15% Similarity=0.286 Sum_probs=17.2
Q ss_pred cceeCCeecCCceEeCCCCC
Q 037727 28 PYKMGSFNLSHRIVLAPLSR 47 (205)
Q Consensus 28 Pi~ig~~~lkNRiv~aPm~~ 47 (205)
..+|.+++++|-|+.+||+.
T Consensus 37 ~t~i~g~~l~~Pi~~a~mag 56 (336)
T 1ypf_A 37 TVTLGKHKFKLPVVPANMQT 56 (336)
T ss_dssp CEEETTEEESSSEEECSSTT
T ss_pred eEEECCEEecCcEEECCCCC
Confidence 45678899999999999984
No 85
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=54.37 E-value=40 Score=26.69 Aligned_cols=59 Identities=17% Similarity=0.123 Sum_probs=45.4
Q ss_pred HHHHHhHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 037727 96 KEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVN 175 (205)
Q Consensus 96 d~~i~~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii~ 175 (205)
++.++.+++.++.+++-|++.++ .|.|.. |.. +++.++.+++
T Consensus 98 ~~~~~~~~~~i~~a~~lG~~~v~--~~~G~~-----------------------------------~~~-~~~~~~~~~~ 139 (290)
T 3tva_A 98 ASRVAEMKEISDFASWVGCPAIG--LHIGFV-----------------------------------PES-SSPDYSELVR 139 (290)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEE--ECCCCC-----------------------------------CCT-TSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCEEE--EcCCCC-----------------------------------ccc-chHHHHHHHH
Confidence 45789999999999999998765 344420 001 4567899999
Q ss_pred HHHHHHHHHHHccccee
Q 037727 176 DFRIAARNAIEAEIKSS 192 (205)
Q Consensus 176 ~f~~AA~ra~~AGfDgV 192 (205)
.+.+.+..|++.|....
T Consensus 140 ~l~~l~~~a~~~Gv~l~ 156 (290)
T 3tva_A 140 VTQDLLTHAANHGQAVH 156 (290)
T ss_dssp HHHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHHHHcCCEEE
Confidence 99999999999998765
No 86
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=53.98 E-value=40 Score=27.22 Aligned_cols=25 Identities=8% Similarity=-0.070 Sum_probs=21.2
Q ss_pred CHHHHHhHHHHHHHHHHcCCeeeEe
Q 037727 95 TKEQVEAWKPIVAEVQAKGGIFFCQ 119 (205)
Q Consensus 95 ~d~~i~~l~~l~~~vH~~G~~i~~Q 119 (205)
.++.++.++++.+.+|++|.++++-
T Consensus 120 ~~~~~~~~~~v~~~~~~~~~~vIi~ 144 (263)
T 1w8s_A 120 EWKMFEELARIKRDAVKFDLPLVVE 144 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 3567889999999999999998764
No 87
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=52.65 E-value=50 Score=26.74 Aligned_cols=58 Identities=17% Similarity=0.088 Sum_probs=44.7
Q ss_pred HHHHHhHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 037727 96 KEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVN 175 (205)
Q Consensus 96 d~~i~~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii~ 175 (205)
++.++.+++.++.+++-|++.++ + + |. +...+.++++.+++
T Consensus 110 ~~~~~~~~~~i~~A~~lG~~~v~-~-~-~~------------------------------------~~~~~~~~~~~~~~ 150 (305)
T 3obe_A 110 PKFDEFWKKATDIHAELGVSCMV-Q-P-SL------------------------------------PRIENEDDAKVVSE 150 (305)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEE-E-C-CC------------------------------------CCCSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCEEE-e-C-CC------------------------------------CCCCCHHHHHHHHH
Confidence 45678888999999999988665 2 1 10 00135788999999
Q ss_pred HHHHHHHHHHHccccee
Q 037727 176 DFRIAARNAIEAEIKSS 192 (205)
Q Consensus 176 ~f~~AA~ra~~AGfDgV 192 (205)
.+.+.+..|++.|....
T Consensus 151 ~l~~l~~~a~~~Gv~l~ 167 (305)
T 3obe_A 151 IFNRAGEITKKAGILWG 167 (305)
T ss_dssp HHHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHHHHcCCEEE
Confidence 99999999999998877
No 88
>1sf9_A YFHH hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative, midwest center for structural genomics; 1.71A {Bacillus subtilis} SCOP: b.34.15.1
Probab=52.65 E-value=16 Score=26.62 Aligned_cols=38 Identities=18% Similarity=0.198 Sum_probs=30.9
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHccc----cee-----eccchhhh
Q 037727 163 RRLRTGEIPQIVNDFRIAARNAIEAEI----KSS-----KQLGYVLE 200 (205)
Q Consensus 163 ~~mt~~eI~~ii~~f~~AA~ra~~AGf----DgV-----~ahGyLl~ 200 (205)
-+||+.|+++-|+.+-+-|+.|.+.|. +.. .|.-||++
T Consensus 30 SeMS~~EL~~EI~~L~EKaRKAEq~Gi~NE~aV~erKi~mAkSYLvD 76 (128)
T 1sf9_A 30 SQMTPHELNTEIALLSEKARKAEQHGIINELAVLERKITMAKAYLLN 76 (128)
T ss_dssp HTCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSC
T ss_pred HHcCHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHcCC
Confidence 479999999999999999999999884 333 66666654
No 89
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=51.93 E-value=59 Score=25.55 Aligned_cols=61 Identities=11% Similarity=0.066 Sum_probs=46.5
Q ss_pred HHHHHhHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 037727 96 KEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVN 175 (205)
Q Consensus 96 d~~i~~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii~ 175 (205)
++.++.+++.++.+++-|++.++= |+|... ....+.+..+.+++
T Consensus 80 ~~~~~~~~~~i~~A~~lG~~~v~~--~~g~~~----------------------------------~~~~~~~~~~~~~~ 123 (286)
T 3dx5_A 80 EKTIEKCEQLAILANWFKTNKIRT--FAGQKG----------------------------------SADFSQQERQEYVN 123 (286)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEE--CSCSSC----------------------------------GGGSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEE--cCCCCC----------------------------------cccCcHHHHHHHHH
Confidence 567899999999999999986631 333210 01235678899999
Q ss_pred HHHHHHHHHHHccccee
Q 037727 176 DFRIAARNAIEAEIKSS 192 (205)
Q Consensus 176 ~f~~AA~ra~~AGfDgV 192 (205)
.+.+.+..|++.|....
T Consensus 124 ~l~~l~~~a~~~Gv~l~ 140 (286)
T 3dx5_A 124 RIRMICELFAQHNMYVL 140 (286)
T ss_dssp HHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHhCCEEE
Confidence 99999999999998776
No 90
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=51.69 E-value=62 Score=25.54 Aligned_cols=65 Identities=9% Similarity=-0.004 Sum_probs=46.9
Q ss_pred HHHHhHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 037727 97 EQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVND 176 (205)
Q Consensus 97 ~~i~~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~ 176 (205)
+.++.+++.++.+++-|++.+.-..|.|... . .....-.++.++.+++.
T Consensus 85 ~~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~----------~---------------------~~~~~~~~~~~~~~~~~ 133 (294)
T 3vni_A 85 NAKAFYTDLLKRLYKLDVHLIGGALYSYWPI----------D---------------------YTKTIDKKGDWERSVES 133 (294)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEESTTSCSSC----------C---------------------TTSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCeeeccccCCCCC----------c---------------------CCCCCCHHHHHHHHHHH
Confidence 4578999999999999998775334443200 0 00011246778999999
Q ss_pred HHHHHHHHHHccccee
Q 037727 177 FRIAARNAIEAEIKSS 192 (205)
Q Consensus 177 f~~AA~ra~~AGfDgV 192 (205)
+.+.+..|++.|....
T Consensus 134 l~~l~~~a~~~Gv~l~ 149 (294)
T 3vni_A 134 VREVAKVAEACGVDFC 149 (294)
T ss_dssp HHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHcCCEEE
Confidence 9999999999998876
No 91
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=51.66 E-value=8.6 Score=33.03 Aligned_cols=23 Identities=17% Similarity=0.206 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHccccee---eccc
Q 037727 174 VNDFRIAARNAIEAEIKSS---KQLG 196 (205)
Q Consensus 174 i~~f~~AA~ra~~AGfDgV---~ahG 196 (205)
+++|+++|++++++|||+| .+++
T Consensus 163 ~e~~~~~a~~~~~~Gf~~vKik~g~~ 188 (393)
T 2og9_A 163 IDQLMVNASASIERGIGGIKLKVGQP 188 (393)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEECCCS
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCC
Confidence 4678999999999999999 5554
No 92
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=50.59 E-value=95 Score=26.13 Aligned_cols=38 Identities=13% Similarity=0.119 Sum_probs=20.5
Q ss_pred EeCCCCCCccCCCCCcHH-HHHHHHHHhcCC--CeEEEecc
Q 037727 41 VLAPLSRMRSYDYIPQPH-AILYYSQRTTEG--GFLISEAS 78 (205)
Q Consensus 41 v~aPm~~~~~~~g~~t~~-~~~~y~~rA~GG--GlIi~~~~ 78 (205)
+.+|+.+-+..||.+... +..+.+.....| |+++.|.+
T Consensus 30 v~~alvTPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtT 70 (344)
T 2hmc_A 30 VIPALMTPCRQDRTPDFDALVRKGKELIADGMSAVVYCGSM 70 (344)
T ss_dssp EEEBCCCCBCTTSSBCHHHHHHHHHHHHHTTCCCEEESSGG
T ss_pred eEEeeeCCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccC
Confidence 345555555556666554 333333334455 88877664
No 93
>2xed_A Putative maleate isomerase; nicotinic acid catabolism, cofactor-independent CIS-trans isomerase; 1.95A {Nocardia farcinica} PDB: 2xec_A
Probab=50.52 E-value=8 Score=31.63 Aligned_cols=29 Identities=3% Similarity=-0.031 Sum_probs=26.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHccccee
Q 037727 164 RLRTGEIPQIVNDFRIAARNAIEAEIKSS 192 (205)
Q Consensus 164 ~mt~~eI~~ii~~f~~AA~ra~~AGfDgV 192 (205)
..+.++|.++.+...++|++..++|+|.|
T Consensus 66 ~v~~~~l~~~~~~l~~aa~~L~~~g~d~I 94 (273)
T 2xed_A 66 TVSPEGLAAMNAQRERCVLEIADAAPEVI 94 (273)
T ss_dssp BCSHHHHHHHHTTHHHHHHHHHTTCCSEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhcCCCEE
Confidence 56788999998889999999999999999
No 94
>2yxy_A Hypothetical conserved protein, GK0453; alpha and beta proteins (A+B) class, structural GENO unknown function, NPPSFA; 2.20A {Geobacillus kaustophilus}
Probab=49.43 E-value=17 Score=26.03 Aligned_cols=38 Identities=18% Similarity=0.220 Sum_probs=31.1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHccc----cee-----eccchhhh
Q 037727 163 RRLRTGEIPQIVNDFRIAARNAIEAEI----KSS-----KQLGYVLE 200 (205)
Q Consensus 163 ~~mt~~eI~~ii~~f~~AA~ra~~AGf----DgV-----~ahGyLl~ 200 (205)
.+||+.|+++-|..+-+-|+.|.+.|. +.. .|.-||++
T Consensus 12 SeMS~~EL~~EI~~L~ekarKAEq~G~~nE~aV~erK~~mAksYL~D 58 (115)
T 2yxy_A 12 SEMTKEELQQEIAMLTEKARKAEQMGMVNEYAVYERKIAMAKAYMLN 58 (115)
T ss_dssp GGCCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTSC
T ss_pred hhcCHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHcCC
Confidence 589999999999999999999999884 333 66666654
No 95
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=48.59 E-value=25 Score=30.11 Aligned_cols=87 Identities=13% Similarity=0.014 Sum_probs=47.6
Q ss_pred CCCCcceeCCeecCCceEeCCCCCC-c-cCCCCCcHHHHHHHHHHhcCC-CeEEEeccee--cc---CCCCCCCCCccCC
Q 037727 24 PLLTPYKMGSFNLSHRIVLAPLSRM-R-SYDYIPQPHAILYYSQRTTEG-GFLISEASVV--SE---TGRGYKHTPGIWT 95 (205)
Q Consensus 24 ~Lf~Pi~ig~~~lkNRiv~aPm~~~-~-~~~g~~t~~~~~~y~~rA~GG-GlIi~~~~~V--~~---~g~~~~~~~~l~~ 95 (205)
..-...+|.+.++++-|+.+||... . ..++ + ..+-+.-++-| ++++.+.... .. .+ ..+...-++-
T Consensus 59 ~~d~st~i~G~~l~~Pv~iap~~~~~~~~~~~---~--~~~a~aa~~~G~~~~vss~s~~~le~i~~~~-~~~~~fQly~ 132 (380)
T 1p4c_A 59 RRSLQAEVLGKRQSMPLLIGPTGLNGALWPKG---D--LALARAATKAGIPFVLSTASNMSIEDLARQC-DGDLWFQLYV 132 (380)
T ss_dssp SCBCCEEETTEEESSSEEECCCSCGGGTSTTH---H--HHHHHHHHHHTCCEEECTTCSSCHHHHHHHC-CSCEEEEECC
T ss_pred cCcceeEECCeecCCceEecCccccccCCCcH---H--HHHHHHHHHcCCCeecCccccCCHHHHHhcc-CCCeEEEEEe
Confidence 3444678899999999999999642 2 2332 2 33333334456 8877753221 11 01 1111111221
Q ss_pred HHHHHhHHHHHHHHHHcCCeee
Q 037727 96 KEQVEAWKPIVAEVQAKGGIFF 117 (205)
Q Consensus 96 d~~i~~l~~l~~~vH~~G~~i~ 117 (205)
.. .....++++.+.+.|++++
T Consensus 133 ~~-~~~~~~~i~~a~~aG~~al 153 (380)
T 1p4c_A 133 IH-REIAQGMVLKALHTGYTTL 153 (380)
T ss_dssp SS-HHHHHHHHHHHHHTTCCEE
T ss_pred ch-HHHHHHHHHHHHHcCCCEE
Confidence 12 3455667888888898754
No 96
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=48.46 E-value=60 Score=27.51 Aligned_cols=89 Identities=12% Similarity=0.064 Sum_probs=49.0
Q ss_pred CCCCcceeCCeecCCceEeCCCCCCccCCCCCcHHHHHHHHHHhcCC-CeEEEecceeccC----CCCCCCCCccC--CH
Q 037727 24 PLLTPYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEG-GFLISEASVVSET----GRGYKHTPGIW--TK 96 (205)
Q Consensus 24 ~Lf~Pi~ig~~~lkNRiv~aPm~~~~~~~g~~t~~~~~~y~~rA~GG-GlIi~~~~~V~~~----g~~~~~~~~l~--~d 96 (205)
..=...+|.+.++++.|+.+||+...- ..+ +...++=+.-++-| ++++++....+.+ ....+...-|| .|
T Consensus 58 ~~d~~t~i~G~~~~~Pi~iAPmg~~~l--~~~-~~e~a~a~aa~~~G~~~~~s~~~~~~ieev~~~~~~~~~~QLy~~~d 134 (370)
T 1gox_A 58 NIDMTTTILGFKISMPIMIAPTAMQKM--AHP-EGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKD 134 (370)
T ss_dssp CCBCCEEETTEEESSSEEECCCSCGGG--TCT-THHHHHHHHHHHTTCCEEECTTCSSCHHHHHTTCCCCEEEEECCBSS
T ss_pred CCCCceEECCcccCCceeEcccchhhh--ccc-hHHHHHHHHHHHcCCCeeccCCCCCCHHHHHhhcCCCceEEEecCCC
Confidence 344567889999999999999953211 112 12234444445667 7777654432210 00112112222 23
Q ss_pred HHHHhHHHHHHHHHHcCCeee
Q 037727 97 EQVEAWKPIVAEVQAKGGIFF 117 (205)
Q Consensus 97 ~~i~~l~~l~~~vH~~G~~i~ 117 (205)
. +...++++.+.+.|++++
T Consensus 135 ~--~~~~~~~~~a~~~G~~ai 153 (370)
T 1gox_A 135 R--NVVAQLVRRAERAGFKAI 153 (370)
T ss_dssp H--HHHHHHHHHHHHTTCCEE
T ss_pred c--hHHHHHHHHHHHCCCCEE
Confidence 2 344778888888898754
No 97
>3o6c_A PNP synthase, pyridoxine 5'-phosphate synthase; structural genomics, IDP90671, center for structural genomic infectious diseases; HET: MSE; 1.87A {Campylobacter jejuni subsp} SCOP: c.1.24.0 PDB: 3o6d_A*
Probab=47.98 E-value=6.8 Score=32.19 Aligned_cols=28 Identities=14% Similarity=0.357 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHHHHcccceeeccch
Q 037727 170 IPQIVNDFRIAARNAIEAEIKSSKQLGY 197 (205)
Q Consensus 170 I~~ii~~f~~AA~ra~~AGfDgV~ahGy 197 (205)
.++-++.+.+||+.|.+.|.-.-+|||-
T Consensus 188 ~~~el~~l~~aA~~A~~lGL~VnAGHGL 215 (260)
T 3o6c_A 188 FEKELQNLELCAKKGLELGLKVAAGHGL 215 (260)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEECTTC
T ss_pred HHHHHHHHHHHHHHHHHcCCEEecCCCC
Confidence 4457789999999999999754499983
No 98
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=47.87 E-value=53 Score=28.25 Aligned_cols=59 Identities=22% Similarity=0.213 Sum_probs=35.9
Q ss_pred cHHHHHHHHHHh-cCC-CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCeeeE
Q 037727 56 QPHAILYYSQRT-TEG-GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFC 118 (205)
Q Consensus 56 t~~~~~~y~~rA-~GG-GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~~ 118 (205)
+...+...++.. +-| -+..+++..++.+..... -.-++.++.+++.++.+.+.|+++++
T Consensus 62 ~~~~i~~lk~~l~~~GL~i~~i~s~~~~~~i~~~~----~~r~~~ie~~k~~i~~aa~lGi~~v~ 122 (386)
T 3bdk_A 62 PLENILELKKMVEEAGLEITVIESIPVHEDIKQGK----PNRDALIENYKTSIRNVGAAGIPVVC 122 (386)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECCCCCHHHHTTC----TTHHHHHHHHHHHHHHHHTTTCCEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEEEeccccccccccCc----HHHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 444455555544 445 555555544432211111 12467899999999999999999764
No 99
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=46.87 E-value=72 Score=25.53 Aligned_cols=64 Identities=11% Similarity=-0.088 Sum_probs=45.6
Q ss_pred HHHHhHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCC-CCHHHHHHHHH
Q 037727 97 EQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRR-LRTGEIPQIVN 175 (205)
Q Consensus 97 ~~i~~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~-mt~~eI~~ii~ 175 (205)
+.++.+++.++.+++-|++.++ .|.- + ..|. ..+.. .+++.++.+++
T Consensus 104 ~~~~~~~~~i~~A~~lG~~~v~--~~~~--~-----~~g~-----------------------~~~~~~~~~~~~~~~~~ 151 (309)
T 2hk0_A 104 AGKAFFERTLSNVAKLDIHTIG--GALH--S-----YWPI-----------------------DYSQPVDKAGDYARGVE 151 (309)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEE--ECTT--S-----CSSC-----------------------CTTSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCEEE--eecc--c-----cccc-----------------------cCCCcCChHHHHHHHHH
Confidence 4578999999999999999876 2210 0 0000 00112 35678899999
Q ss_pred HHHHHHHHHHHccccee
Q 037727 176 DFRIAARNAIEAEIKSS 192 (205)
Q Consensus 176 ~f~~AA~ra~~AGfDgV 192 (205)
.+.+.+..|++.|....
T Consensus 152 ~l~~l~~~a~~~gv~l~ 168 (309)
T 2hk0_A 152 GINGIADFANDLGINLC 168 (309)
T ss_dssp HHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHcCCEEE
Confidence 99999999999998776
No 100
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=46.45 E-value=1.2e+02 Score=25.08 Aligned_cols=70 Identities=11% Similarity=0.124 Sum_probs=43.6
Q ss_pred HHhHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 037727 99 VEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVNDFR 178 (205)
Q Consensus 99 i~~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~ 178 (205)
.+.+++++++++++|-++++.|+|....+.+.. ...|. .+ ..++.++..+-+.+|.
T Consensus 59 ~~~~~~~~~~ak~~Gl~v~ld~hysd~wadP~~------q~~p~--~W----------------~~~~~~~~~~~~~~yt 114 (334)
T 1fob_A 59 LDYNLELAKRVKAAGMSLYLDLHLSDTWADPSD------QTTPS--GW----------------STTDLGTLKWQLYNYT 114 (334)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSSSCCBTTB------CBCCT--TS----------------CSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccCCCCCCccc------ccCcc--cc----------------ccCChHHHHHHHHHHH
Confidence 668899999999999999999977544333321 11111 00 1256677777777766
Q ss_pred HHH-HHHHHcc--ccee
Q 037727 179 IAA-RNAIEAE--IKSS 192 (205)
Q Consensus 179 ~AA-~ra~~AG--fDgV 192 (205)
..+ .+.+++| .|.|
T Consensus 115 ~~v~~~l~~~g~~v~~v 131 (334)
T 1fob_A 115 LEVCNTFAENDIDIEII 131 (334)
T ss_dssp HHHHHHHHHTTCCCSEE
T ss_pred HHHHHHHHhCCCCCCEE
Confidence 544 4445555 5666
No 101
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=45.89 E-value=11 Score=31.99 Aligned_cols=18 Identities=11% Similarity=0.010 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHccccee
Q 037727 175 NDFRIAARNAIEAEIKSS 192 (205)
Q Consensus 175 ~~f~~AA~ra~~AGfDgV 192 (205)
++|+++|++++++|||+|
T Consensus 147 ~~~~~~a~~~~~~Gf~~i 164 (379)
T 2rdx_A 147 AETRAELARHRAAGYRQF 164 (379)
T ss_dssp HHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHcCCCEE
Confidence 568999999999999999
No 102
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=45.50 E-value=67 Score=24.72 Aligned_cols=61 Identities=11% Similarity=-0.036 Sum_probs=45.5
Q ss_pred HHHHHhHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 037727 96 KEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVN 175 (205)
Q Consensus 96 d~~i~~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii~ 175 (205)
++.++.+++.++.+++-|++.++ .|.|.. |. ..-+++.++.+++
T Consensus 81 ~~~~~~~~~~i~~a~~lG~~~v~--~~~g~~--------------~~--------------------~~~~~~~~~~~~~ 124 (260)
T 1k77_A 81 HEAHADIDLALEYALALNCEQVH--VMAGVV--------------PA--------------------GEDAERYRAVFID 124 (260)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEE--CCCCBC--------------CT--------------------TSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCEEE--ECcCCC--------------CC--------------------CCCHHHHHHHHHH
Confidence 46789999999999999998663 344421 00 0013567889999
Q ss_pred HHHHHHHHHHHccccee
Q 037727 176 DFRIAARNAIEAEIKSS 192 (205)
Q Consensus 176 ~f~~AA~ra~~AGfDgV 192 (205)
.+.+.+..|++.|....
T Consensus 125 ~l~~l~~~a~~~gv~l~ 141 (260)
T 1k77_A 125 NIRYAADRFAPHGKRIL 141 (260)
T ss_dssp HHHHHHHHHGGGTCEEE
T ss_pred HHHHHHHHHHHcCCEEE
Confidence 99999999999998776
No 103
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=44.98 E-value=55 Score=28.84 Aligned_cols=27 Identities=15% Similarity=0.274 Sum_probs=23.4
Q ss_pred HHhHHHHHHHHHHcCCeeeEec--ccccc
Q 037727 99 VEAWKPIVAEVQAKGGIFFCQL--LHAGR 125 (205)
Q Consensus 99 i~~l~~l~~~vH~~G~~i~~QL--~H~Gr 125 (205)
.+.|++|++++|+.|.++++-+ +|.|.
T Consensus 81 ~~dfk~Lv~~aH~~Gi~VilD~V~NH~~~ 109 (515)
T 1hvx_A 81 KAQYLQAIQAAHAAGMQVYADVVFDHKGG 109 (515)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecCCccC
Confidence 6789999999999999999864 78764
No 104
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=44.05 E-value=14 Score=31.10 Aligned_cols=22 Identities=14% Similarity=-0.085 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHccccee---eccc
Q 037727 175 NDFRIAARNAIEAEIKSS---KQLG 196 (205)
Q Consensus 175 ~~f~~AA~ra~~AGfDgV---~ahG 196 (205)
++|+++|++++++|||.| .+|+
T Consensus 146 ~~~~~~a~~~~~~Gf~~iKik~g~~ 170 (359)
T 1mdl_A 146 KLATERAVTAAELGFRAVKTRIGYP 170 (359)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCC
Confidence 558899999999999999 6664
No 105
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=43.75 E-value=27 Score=30.16 Aligned_cols=91 Identities=14% Similarity=0.066 Sum_probs=47.2
Q ss_pred CCCCcceeCCeecCCceEeCCCCCCccCCCCCcHHHHHHHHHHhcCC-CeEEEecceec-----cCCCCCCCCCccCCHH
Q 037727 24 PLLTPYKMGSFNLSHRIVLAPLSRMRSYDYIPQPHAILYYSQRTTEG-GFLISEASVVS-----ETGRGYKHTPGIWTKE 97 (205)
Q Consensus 24 ~Lf~Pi~ig~~~lkNRiv~aPm~~~~~~~g~~t~~~~~~y~~rA~GG-GlIi~~~~~V~-----~~g~~~~~~~~l~~d~ 97 (205)
..=...+|.+.++++-|+.+||+...-. .+.-+ +++=+.-++-| ++++++..... ......+...-||-..
T Consensus 81 ~~d~st~i~G~~l~~Pi~iAPmg~~~l~--~~~~e-~~laraA~~~G~~~~~s~~~s~~le~v~~~~~~~~~~~QLy~~~ 157 (392)
T 2nzl_A 81 ETDLSTSVLGQRVSMPICVGATAMQRMA--HVDGE-LATVRACQSLGTGMMLSSWATSSIEEVAEAGPEALRWLQLYIYK 157 (392)
T ss_dssp TCBCCEEETTEEESSSEEECCCSCGGGT--STTHH-HHHHHHHHHHTCEEEECTTCSSCHHHHHHHCTTSEEEEEECCBS
T ss_pred CCCcceEECCEecCCceEeccccccccc--cchHH-HHHHHHHHHcCCCeeccchHHHHHHHHHHhcCCCcEEEEEEecC
Confidence 3444678899999999999999432111 12212 34334444456 77776654311 1100111111122222
Q ss_pred HHHhHHHHHHHHHHcCCeee
Q 037727 98 QVEAWKPIVAEVQAKGGIFF 117 (205)
Q Consensus 98 ~i~~l~~l~~~vH~~G~~i~ 117 (205)
..+...++++.+.+.|++++
T Consensus 158 d~~~~~~~~~ra~~~G~~al 177 (392)
T 2nzl_A 158 DREVTKKLVRQAEKMGYKAI 177 (392)
T ss_dssp SHHHHHHHHHHHHHTTCCCE
T ss_pred CHHHHHHHHHHHHHCCCCEE
Confidence 23455667777788887644
No 106
>4ffu_A Oxidase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgrc, PS biology; HET: MSE; 1.80A {Sinorhizobium meliloti}
Probab=43.22 E-value=9.2 Score=29.08 Aligned_cols=41 Identities=10% Similarity=-0.117 Sum_probs=28.7
Q ss_pred CCCCCHHHHHHHHHHHHH------HHHHHHHcccceeeccchhhhhh
Q 037727 162 PRRLRTGEIPQIVNDFRI------AARNAIEAEIKSSKQLGYVLEIE 202 (205)
Q Consensus 162 ~~~mt~~eI~~ii~~f~~------AA~ra~~AGfDgV~ahGyLl~qF 202 (205)
.+.+|.++|........+ -...|+++||.++-+||.|+..+
T Consensus 44 ~~tvt~~~i~~fA~~sgD~nPiH~D~~~A~~~gf~~~IahG~~t~~l 90 (176)
T 4ffu_A 44 GRTITETDFVVHAGHTGDFFPHHMDAEFAKTLPGGQRIAHGTMIFSI 90 (176)
T ss_dssp CEECCHHHHHHHHHHHCCCCHHHHCHHHHTTSTTSSCCCCHHHHHHH
T ss_pred CEEECHHHHHHHHHHhCCCCccccCHHHHHhcCCCCcccChHHHHHH
Confidence 578999998874443211 14567889999998898876544
No 107
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=42.85 E-value=21 Score=30.50 Aligned_cols=34 Identities=9% Similarity=0.075 Sum_probs=28.5
Q ss_pred CCCHHHHHHHHHHH-----------HHHHHHHHHccccee--eccch
Q 037727 164 RLRTGEIPQIVNDF-----------RIAARNAIEAEIKSS--KQLGY 197 (205)
Q Consensus 164 ~mt~~eI~~ii~~f-----------~~AA~ra~~AGfDgV--~ahGy 197 (205)
.++-++|+.+.+.. .+-|++|.++|+|+| ..||.
T Consensus 203 ~~~w~~i~~lr~~~~~PvivK~v~~~e~A~~a~~~GaD~I~vsn~GG 249 (352)
T 3sgz_A 203 SFCWNDLSLLQSITRLPIILKGILTKEDAELAMKHNVQGIVVSNHGG 249 (352)
T ss_dssp TCCHHHHHHHHHHCCSCEEEEEECSHHHHHHHHHTTCSEEEECCGGG
T ss_pred CCCHHHHHHHHHhcCCCEEEEecCcHHHHHHHHHcCCCEEEEeCCCC
Confidence 58889999988763 578999999999999 66765
No 108
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=42.70 E-value=14 Score=31.56 Aligned_cols=19 Identities=5% Similarity=-0.076 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHccccee
Q 037727 174 VNDFRIAARNAIEAEIKSS 192 (205)
Q Consensus 174 i~~f~~AA~ra~~AGfDgV 192 (205)
+++|+++|++++++|||+|
T Consensus 148 ~e~~~~~a~~~~~~Gf~~i 166 (384)
T 2pgw_A 148 AEELARDAAVGHAQGERVF 166 (384)
T ss_dssp HHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHHcCCCEE
Confidence 3568999999999999999
No 109
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=42.26 E-value=1.1e+02 Score=24.14 Aligned_cols=60 Identities=12% Similarity=0.085 Sum_probs=44.9
Q ss_pred HHHHhHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 037727 97 EQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVND 176 (205)
Q Consensus 97 ~~i~~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~ 176 (205)
+.++.+++.++.+++-|++.++ .|.+. . + ...-+++.++.+++.
T Consensus 105 ~~~~~~~~~i~~A~~lG~~~v~--~~~~~------------~--~--------------------~~~~~~~~~~~~~~~ 148 (295)
T 3cqj_A 105 QGLEIMRKAIQFAQDVGIRVIQ--LAGYD------------V--Y--------------------YQEANNETRRRFRDG 148 (295)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEE--ECCCS------------C--S--------------------SSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCEEE--ECCCC------------C--C--------------------cCcCHHHHHHHHHHH
Confidence 4688999999999999998764 23211 0 0 011246788999999
Q ss_pred HHHHHHHHHHccccee
Q 037727 177 FRIAARNAIEAEIKSS 192 (205)
Q Consensus 177 f~~AA~ra~~AGfDgV 192 (205)
+.+.+..|++.|....
T Consensus 149 l~~l~~~a~~~Gv~l~ 164 (295)
T 3cqj_A 149 LKESVEMASRAQVTLA 164 (295)
T ss_dssp HHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHhCCEEE
Confidence 9999999999998876
No 110
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=41.35 E-value=90 Score=24.09 Aligned_cols=61 Identities=15% Similarity=0.134 Sum_probs=44.6
Q ss_pred HHHHhHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 037727 97 EQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVND 176 (205)
Q Consensus 97 ~~i~~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~ 176 (205)
+.++.+++.++.+++-|++.++ .|.|.. |. ...-+++.++.+++.
T Consensus 80 ~~~~~~~~~i~~a~~lG~~~v~--~~~g~~--------------~~-------------------~~~~~~~~~~~~~~~ 124 (275)
T 3qc0_A 80 KAIDDNRRAVDEAAELGADCLV--LVAGGL--------------PG-------------------GSKNIDAARRMVVEG 124 (275)
T ss_dssp HHHHHHHHHHHHHHHTTCSCEE--EECBCC--------------CT-------------------TCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCEEE--EeeCCC--------------CC-------------------CCcCHHHHHHHHHHH
Confidence 4678899999999999988664 233321 00 001245678999999
Q ss_pred HHHHHHHHHHccccee
Q 037727 177 FRIAARNAIEAEIKSS 192 (205)
Q Consensus 177 f~~AA~ra~~AGfDgV 192 (205)
+.+.+..|++.|....
T Consensus 125 l~~l~~~a~~~gv~l~ 140 (275)
T 3qc0_A 125 IAAVLPHARAAGVPLA 140 (275)
T ss_dssp HHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHcCCEEE
Confidence 9999999999999877
No 111
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=41.32 E-value=16 Score=31.01 Aligned_cols=22 Identities=9% Similarity=0.114 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHccccee---eccc
Q 037727 175 NDFRIAARNAIEAEIKSS---KQLG 196 (205)
Q Consensus 175 ~~f~~AA~ra~~AGfDgV---~ahG 196 (205)
++|+++|++++++|||.| .+|+
T Consensus 148 e~~~~~a~~~~~~Gf~~iKik~g~~ 172 (371)
T 2ovl_A 148 ADLKTQADRFLAGGFRAIKMKVGRP 172 (371)
T ss_dssp HHHHHHHHHHHHTTCSCEEEECCCS
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCC
Confidence 457889999999999999 6664
No 112
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=40.79 E-value=90 Score=24.36 Aligned_cols=60 Identities=17% Similarity=0.073 Sum_probs=45.5
Q ss_pred HHHHHhHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 037727 96 KEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVN 175 (205)
Q Consensus 96 d~~i~~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii~ 175 (205)
++.++.+++.++.+++-|++.++ .|.| . +. ...+++.++.+++
T Consensus 89 ~~~~~~~~~~i~~A~~lGa~~v~--~~~g-~--~~--------------------------------~~~~~~~~~~~~~ 131 (269)
T 3ngf_A 89 QEFRDNVDIALHYALALDCRTLH--AMSG-I--TE--------------------------------GLDRKACEETFIE 131 (269)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEE--CCBC-B--CT--------------------------------TSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCEEE--EccC-C--CC--------------------------------CCCHHHHHHHHHH
Confidence 45788999999999999998764 2333 1 00 0124667899999
Q ss_pred HHHHHHHHHHHccccee
Q 037727 176 DFRIAARNAIEAEIKSS 192 (205)
Q Consensus 176 ~f~~AA~ra~~AGfDgV 192 (205)
.+.+.+..|++.|....
T Consensus 132 ~l~~l~~~a~~~Gv~l~ 148 (269)
T 3ngf_A 132 NFRYAADKLAPHGITVL 148 (269)
T ss_dssp HHHHHHHHHGGGTCEEE
T ss_pred HHHHHHHHHHHcCCEEE
Confidence 99999999999998866
No 113
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=40.67 E-value=15 Score=31.35 Aligned_cols=22 Identities=0% Similarity=-0.171 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHccccee---eccc
Q 037727 175 NDFRIAARNAIEAEIKSS---KQLG 196 (205)
Q Consensus 175 ~~f~~AA~ra~~AGfDgV---~ahG 196 (205)
++|+++|++++++||++| .+|+
T Consensus 141 e~~~~~a~~~~~~Gf~~vKik~g~~ 165 (382)
T 2gdq_A 141 SRSVSNVEAQLKKGFEQIKVKIGGT 165 (382)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECSSS
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCC
Confidence 778899999999999999 6663
No 114
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A*
Probab=40.29 E-value=32 Score=28.99 Aligned_cols=33 Identities=9% Similarity=0.059 Sum_probs=29.5
Q ss_pred cCCHHHHHhHHHHHHHHHHcCCeeeEecccccc
Q 037727 93 IWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGR 125 (205)
Q Consensus 93 l~~d~~i~~l~~l~~~vH~~G~~i~~QL~H~Gr 125 (205)
..+++.++.++++++.++++|.++++-|.|.|.
T Consensus 103 ~~~~~~l~~~d~~v~~a~~~Gi~vild~h~~~~ 135 (395)
T 2jep_A 103 TINAAWLNRIQQVVDYAYNEGLYVIINIHGDGY 135 (395)
T ss_dssp CBCHHHHHHHHHHHHHHHTTTCEEEECCCGGGC
T ss_pred ccCHHHHHHHHHHHHHHHHCCCEEEEECCCccc
Confidence 357788999999999999999999999999853
No 115
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=39.77 E-value=18 Score=30.96 Aligned_cols=23 Identities=9% Similarity=-0.112 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHccccee---eccch
Q 037727 175 NDFRIAARNAIEAEIKSS---KQLGY 197 (205)
Q Consensus 175 ~~f~~AA~ra~~AGfDgV---~ahGy 197 (205)
++|+++|++++++||+.| .+|+.
T Consensus 147 ~~~~~~a~~~~~~Gf~~vKik~g~~~ 172 (389)
T 2oz8_A 147 DAFVSLFSHAASIGYSAFKIKVGHRD 172 (389)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCSS
T ss_pred HHHHHHHHHHHHhCCCEEEEccCCCC
Confidence 558899999999999999 66643
No 116
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A*
Probab=39.35 E-value=45 Score=27.80 Aligned_cols=69 Identities=10% Similarity=-0.073 Sum_probs=43.2
Q ss_pred CCCCcHHHHHHHHHHhcCCCeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCeeeEecccccc
Q 037727 52 DYIPQPHAILYYSQRTTEGGFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGR 125 (205)
Q Consensus 52 ~g~~t~~~~~~y~~rA~GGGlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~~QL~H~Gr 125 (205)
+-..+++.+++.++. |--.|=+ +|+-.........+..++..+..++++++.++++|.++++-|+|.+.
T Consensus 40 ~p~~t~~di~~i~~~--G~n~vRi---pi~w~~~~~~~~~~~~~~~~l~~l~~~v~~a~~~Gi~vildlH~~~~ 108 (345)
T 3ndz_A 40 NPMTTHAMINKIKEA--GFNTLRL---PVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDMYVIINLHHENE 108 (345)
T ss_dssp CCCCCHHHHHHHHHH--TCCEEEE---CCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEECCCSCTT
T ss_pred CCCCcHHHHHHHHHC--CCCEEEE---eeehHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEecCCccc
Confidence 334578877776433 3233322 22211110011123357888999999999999999999999999764
No 117
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=39.18 E-value=17 Score=31.08 Aligned_cols=19 Identities=5% Similarity=-0.106 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHccccee
Q 037727 174 VNDFRIAARNAIEAEIKSS 192 (205)
Q Consensus 174 i~~f~~AA~ra~~AGfDgV 192 (205)
+++|+++|++++++|||+|
T Consensus 165 ~e~~~~~a~~~~~~Gf~~v 183 (388)
T 2nql_A 165 LKARGELAKYWQDRGFNAF 183 (388)
T ss_dssp HHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHHhCCCEE
Confidence 4678999999999999999
No 118
>2b3n_A Hypothetical protein AF1124; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.25A {Archaeoglobus fulgidus} PDB: 2b3m_A 3k67_A
Probab=39.01 E-value=16 Score=27.26 Aligned_cols=41 Identities=7% Similarity=-0.104 Sum_probs=29.1
Q ss_pred CCCCCHHHHHHHHHHHHH------HHHHHHHcccceeeccchhhhhh
Q 037727 162 PRRLRTGEIPQIVNDFRI------AARNAIEAEIKSSKQLGYVLEIE 202 (205)
Q Consensus 162 ~~~mt~~eI~~ii~~f~~------AA~ra~~AGfDgV~ahGyLl~qF 202 (205)
.+.+|.++|........+ -...|+++||.++-+||.|+..+
T Consensus 45 ~~~vt~~~i~~fA~~sgD~nPiH~D~~~A~~~gf~~~IahG~lt~al 91 (159)
T 2b3n_A 45 EKKLCEIDVAMFGLISGDLNPVHFDEDFASKTRFGGRVVHGMLTTSL 91 (159)
T ss_dssp EEECCHHHHHHHHHHHCCCCHHHHCHHHHHHSTTSSCCCCHHHHHHH
T ss_pred eeeeCHHHHHHHHHHhCCCCCCCcCHHHHHhcCCCCcccCHHHHHHH
Confidence 578999999866554421 12467789999998898876544
No 119
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=38.80 E-value=16 Score=31.19 Aligned_cols=19 Identities=11% Similarity=0.055 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHccccee
Q 037727 174 VNDFRIAARNAIEAEIKSS 192 (205)
Q Consensus 174 i~~f~~AA~ra~~AGfDgV 192 (205)
.++|+++|++++++|||+|
T Consensus 150 ~~~~~~~a~~~~~~Gf~~v 168 (391)
T 2qgy_A 150 TNDYLRQIEKFYGKKYGGI 168 (391)
T ss_dssp HHHHHHHHHHHHHTTCSCE
T ss_pred HHHHHHHHHHHHHcCCCEE
Confidence 4678999999999999999
No 120
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=37.67 E-value=1.2e+02 Score=23.28 Aligned_cols=59 Identities=10% Similarity=0.037 Sum_probs=44.2
Q ss_pred HHHHhHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCC-HHHHHHHHH
Q 037727 97 EQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLR-TGEIPQIVN 175 (205)
Q Consensus 97 ~~i~~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt-~~eI~~ii~ 175 (205)
+.++.+++.++.+++-|++.++= |.|.. + ...+ ++.++.+++
T Consensus 81 ~~~~~~~~~i~~a~~lG~~~v~~--~~g~~--------------~---------------------~~~~~~~~~~~~~~ 123 (278)
T 1i60_A 81 EIITEFKGMMETCKTLGVKYVVA--VPLVT--------------E---------------------QKIVKEEIKKSSVD 123 (278)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEE--ECCBC--------------S---------------------SCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCEEEE--ecCCC--------------C---------------------CCCCHHHHHHHHHH
Confidence 45889999999999999986642 44321 0 0122 567889999
Q ss_pred HHHHHHHHHHHccccee
Q 037727 176 DFRIAARNAIEAEIKSS 192 (205)
Q Consensus 176 ~f~~AA~ra~~AGfDgV 192 (205)
.+.+.+..|++.|....
T Consensus 124 ~l~~l~~~a~~~gv~l~ 140 (278)
T 1i60_A 124 VLTELSDIAEPYGVKIA 140 (278)
T ss_dssp HHHHHHHHHGGGTCEEE
T ss_pred HHHHHHHHHHhcCCEEE
Confidence 99999999999998776
No 121
>1iq6_A (R)-hydratase, (R)-specific enoyl-COA hydratase; polyhydroxyalkanoate, aeromonas caviae, the hydratase 2 motif, lyase; 1.50A {Aeromonas punctata} SCOP: d.38.1.4
Probab=37.63 E-value=7.2 Score=27.42 Aligned_cols=41 Identities=12% Similarity=0.069 Sum_probs=27.6
Q ss_pred CCCCCHHHHHHHHHHHHHH------HHHHHHcccceeeccchhhhhh
Q 037727 162 PRRLRTGEIPQIVNDFRIA------ARNAIEAEIKSSKQLGYVLEIE 202 (205)
Q Consensus 162 ~~~mt~~eI~~ii~~f~~A------A~ra~~AGfDgV~ahGyLl~qF 202 (205)
.+.+|.++|......-.+. ...|++.||.+.-+||.|+..+
T Consensus 15 ~~~vt~~~i~~fa~~~gd~npiH~d~~~A~~~g~~~~i~hG~~~~~l 61 (134)
T 1iq6_A 15 SKRFGAAEVAAFAALSEDFNPLHLDPAFAATTAFERPIVHGMLLASL 61 (134)
T ss_dssp EEECCHHHHHHHHHHHTCCCHHHHCHHHHTTSTTCSCBCCHHHHHHH
T ss_pred eEEeCHHHHHHHHHhhCCCCccccCHHHHHhCCCCCceECHHHHHHH
Confidence 3578888887655432111 4566789999998888876544
No 122
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=37.22 E-value=27 Score=30.51 Aligned_cols=28 Identities=18% Similarity=0.144 Sum_probs=24.3
Q ss_pred HHhHHHHHHHHHHcCCeeeEec--cccccc
Q 037727 99 VEAWKPIVAEVQAKGGIFFCQL--LHAGRI 126 (205)
Q Consensus 99 i~~l~~l~~~vH~~G~~i~~QL--~H~Gr~ 126 (205)
.+.|++|++++|+.|.++++-+ +|.+..
T Consensus 102 ~~df~~Lv~~aH~~Gi~VilD~V~NH~s~~ 131 (488)
T 2wc7_A 102 NEAFKELLDAAHQRNIKVVLDGVFNHSSRG 131 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCSS
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCcCCCc
Confidence 6899999999999999999865 787754
No 123
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=36.86 E-value=1.4e+02 Score=23.95 Aligned_cols=58 Identities=17% Similarity=0.139 Sum_probs=45.6
Q ss_pred HHHHHhHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 037727 96 KEQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVN 175 (205)
Q Consensus 96 d~~i~~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii~ 175 (205)
++.++.+++.++.+++-|++.++= |.+ | ...+.++++.+++
T Consensus 104 ~~~~~~~~~~i~~A~~lG~~~v~~--~~~----------------~---------------------~~~~~~~~~~~~~ 144 (303)
T 3l23_A 104 PKIMEYWKATAADHAKLGCKYLIQ--PMM----------------P---------------------TITTHDEAKLVCD 144 (303)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEE--CSC----------------C---------------------CCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEE--CCC----------------C---------------------CCCCHHHHHHHHH
Confidence 567899999999999999986641 110 0 0135778999999
Q ss_pred HHHHHHHHHHHcccc--ee
Q 037727 176 DFRIAARNAIEAEIK--SS 192 (205)
Q Consensus 176 ~f~~AA~ra~~AGfD--gV 192 (205)
.+.+++..|++.|.. ..
T Consensus 145 ~l~~l~~~a~~~Gv~~~l~ 163 (303)
T 3l23_A 145 IFNQASDVIKAEGIATGFG 163 (303)
T ss_dssp HHHHHHHHHHHTTCTTCEE
T ss_pred HHHHHHHHHHHCCCcceEE
Confidence 999999999999999 55
No 124
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=36.50 E-value=22 Score=30.50 Aligned_cols=28 Identities=11% Similarity=0.228 Sum_probs=23.3
Q ss_pred HHhHHHHHHHHHHcCCeeeEe--ccccccc
Q 037727 99 VEAWKPIVAEVQAKGGIFFCQ--LLHAGRI 126 (205)
Q Consensus 99 i~~l~~l~~~vH~~G~~i~~Q--L~H~Gr~ 126 (205)
.+.||+|++++|+.|.+|++= ++|.+..
T Consensus 76 ~~df~~lv~~aH~~Gi~VilD~V~NH~~~~ 105 (496)
T 4gqr_A 76 EDEFRNMVTRCNNVGVRIYVDAVINHMCGN 105 (496)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEEEET
T ss_pred HHHHHHHHHHHHHCCCEEEEEEccCcCCCc
Confidence 568999999999999999875 4776643
No 125
>3apg_A Beta-glucosidase; TIM barrel, hydrolase, sugar binding, hydrolysis; 2.35A {Pyrococcus furiosus}
Probab=36.36 E-value=90 Score=27.66 Aligned_cols=30 Identities=23% Similarity=0.399 Sum_probs=27.4
Q ss_pred HHHHHhHHHHHHHHHHcCCeeeEecccccc
Q 037727 96 KEQVEAWKPIVAEVQAKGGIFFCQLLHAGR 125 (205)
Q Consensus 96 d~~i~~l~~l~~~vH~~G~~i~~QL~H~Gr 125 (205)
.+-+..++++++.++++|.++++=|.|...
T Consensus 125 ~~g~~~Y~~~id~l~~~Gi~pivtL~H~~l 154 (473)
T 3apg_A 125 MEALEHYRKIYSDWKERGKTFILNLYHWPL 154 (473)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEESCCSCC
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence 677999999999999999999999999753
No 126
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A
Probab=36.33 E-value=39 Score=27.43 Aligned_cols=33 Identities=15% Similarity=0.109 Sum_probs=29.7
Q ss_pred cCCHHHHHhHHHHHHHHHHcCCeeeEecccccc
Q 037727 93 IWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGR 125 (205)
Q Consensus 93 l~~d~~i~~l~~l~~~vH~~G~~i~~QL~H~Gr 125 (205)
..+.+.+..++++++.+.++|.++++-|.|.++
T Consensus 65 ~~~~~~l~~~~~~v~~~~~~gi~vild~h~~~~ 97 (305)
T 1h1n_A 65 SPDPNYLADLIATVNAITQKGAYAVVDPHNYGR 97 (305)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCEEEEEECCTTE
T ss_pred CcCHHHHHHHHHHHHHHHHCCCEEEEecccccc
Confidence 367889999999999999999999999999754
No 127
>3o0f_A Putative metal-dependent phosphoesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: AMP; 1.94A {Bifidobacterium adolescentis} PDB: 3e0f_A*
Probab=35.74 E-value=72 Score=26.45 Aligned_cols=26 Identities=27% Similarity=0.463 Sum_probs=20.6
Q ss_pred HHhHHHHHHHHHHcCCeeeEeccccccc
Q 037727 99 VEAWKPIVAEVQAKGGIFFCQLLHAGRI 126 (205)
Q Consensus 99 i~~l~~l~~~vH~~G~~i~~QL~H~Gr~ 126 (205)
...+.+.++.||+.|+.++ |.|..|.
T Consensus 182 ~~~~~eaI~~I~~aGGvaV--LAHP~r~ 207 (301)
T 3o0f_A 182 SPSTHEVIAAVKGAGGVVV--AAHAGDP 207 (301)
T ss_dssp CCBHHHHHHHHHHTTCEEE--ECSTTCT
T ss_pred CCCHHHHHHHHHHCCCEEE--ecChhhh
Confidence 3468899999999998865 6888764
No 128
>3exz_A MAOC-like dehydratase; Q2RSA1_rhort, NESG, RRR103A, structur genomics, PSI-2, protein structure initiative; 2.30A {Rhodospirillum rubrum}
Probab=35.60 E-value=12 Score=27.53 Aligned_cols=41 Identities=10% Similarity=-0.006 Sum_probs=30.1
Q ss_pred CCCCCHHHHHHHHHHHHH------HHHHHHHcccceeeccchhhhhhc
Q 037727 162 PRRLRTGEIPQIVNDFRI------AARNAIEAEIKSSKQLGYVLEIEC 203 (205)
Q Consensus 162 ~~~mt~~eI~~ii~~f~~------AA~ra~~AGfDgV~ahGyLl~qFl 203 (205)
.+.+|.++|..... -.+ -...|+++||.++-+||.|...++
T Consensus 18 ~~~vt~~~i~~fA~-sgD~npiH~D~~~A~~~gf~~~iahG~~~~~l~ 64 (154)
T 3exz_A 18 RHRVEAAAIKAFAG-EFDPQPFHLDEEAARHSLFGGLAASGWHTAAIT 64 (154)
T ss_dssp CEECCHHHHHHHHH-HHCCCHHHHCHHHHHTSTTCSCCCCHHHHHHHH
T ss_pred CEEECHHHHHHHHH-cCCCCceEECHHHHhhCCCCCeecChHHHHHHH
Confidence 57899999998766 332 234577899999988988765443
No 129
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=35.42 E-value=69 Score=26.48 Aligned_cols=26 Identities=8% Similarity=0.120 Sum_probs=22.6
Q ss_pred HHHHHhHHHHHHHHHHcCCeeeEecc
Q 037727 96 KEQVEAWKPIVAEVQAKGGIFFCQLL 121 (205)
Q Consensus 96 d~~i~~l~~l~~~vH~~G~~i~~QL~ 121 (205)
.++++.++++.+++|++|..+++-+.
T Consensus 138 ~~~~~~i~~v~~~~~~~G~p~lv~~~ 163 (304)
T 1to3_A 138 QQRLNMVKEFNELCHSNGLLSIIEPV 163 (304)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCcEEEEEE
Confidence 46789999999999999999888754
No 130
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=35.23 E-value=26 Score=29.16 Aligned_cols=27 Identities=19% Similarity=0.148 Sum_probs=20.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHccccee-eccch
Q 037727 164 RLRTGEIPQIVNDFRIAARNAIEAEIKSS-KQLGY 197 (205)
Q Consensus 164 ~mt~~eI~~ii~~f~~AA~ra~~AGfDgV-~ahGy 197 (205)
.||.+||. .|++.|.+||+|.| -.-||
T Consensus 184 ~Lt~eei~-------~A~~ia~eaGADfVKTSTGf 211 (288)
T 3oa3_A 184 QLTADEII-------AGCVLSSLAGADYVKTSTGF 211 (288)
T ss_dssp GCCHHHHH-------HHHHHHHHTTCSEEECCCSS
T ss_pred CCCHHHHH-------HHHHHHHHcCCCEEEcCCCC
Confidence 57777643 58899999999999 44554
No 131
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=34.92 E-value=63 Score=26.36 Aligned_cols=71 Identities=4% Similarity=-0.067 Sum_probs=39.9
Q ss_pred eCCCCCCccCCCCCcHHH-HHHHHHHhcCC--CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCeeeE
Q 037727 42 LAPLSRMRSYDYIPQPHA-ILYYSQRTTEG--GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFC 118 (205)
Q Consensus 42 ~aPm~~~~~~~g~~t~~~-~~~y~~rA~GG--GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~~ 118 (205)
.+|+.+-+..||.+.... .++.+.....| |+++.|.+ | ....+..+|...-++.+++++.. ..++++
T Consensus 6 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~Gtt-----G----E~~~Ls~~Er~~v~~~~~~~~~g-r~pvia 75 (292)
T 2ojp_A 6 IVAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTT-----G----ESATLNHDEHADVVMMTLDLADG-RIPVIA 75 (292)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTT-----T----TGGGSCHHHHHHHHHHHHHHHTT-SSCEEE
T ss_pred eeeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccc-----c----chhhCCHHHHHHHHHHHHHHhCC-CCcEEE
Confidence 455555555566665433 33333333445 77777653 2 23445667777777777777643 356666
Q ss_pred eccc
Q 037727 119 QLLH 122 (205)
Q Consensus 119 QL~H 122 (205)
....
T Consensus 76 Gvg~ 79 (292)
T 2ojp_A 76 GTGA 79 (292)
T ss_dssp ECCC
T ss_pred ecCC
Confidence 6654
No 132
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A
Probab=34.49 E-value=62 Score=30.22 Aligned_cols=52 Identities=10% Similarity=0.024 Sum_probs=37.3
Q ss_pred CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCeeeEec--ccccccc
Q 037727 71 GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQL--LHAGRIS 127 (205)
Q Consensus 71 GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~~QL--~H~Gr~~ 127 (205)
|--++...++++.-...+ .....+..+|++++++|+.|-++++-+ +|.+...
T Consensus 355 GYd~~~y~a~~~~ygt~~-----d~~~~~~efk~LV~~aH~~GIkVIlDvV~NHts~~h 408 (884)
T 4aio_A 355 GYNPVLWGVPKGSYASDP-----DGPSRIIEYRQMVQALNRIGLRVVMDVVYNHLDSSG 408 (884)
T ss_dssp CCCEEEEEEECGGGSSCS-----STTHHHHHHHHHHHHHHHTTCEEEEEECCSBCSCCS
T ss_pred CcCcccccCCCcccccCc-----cccchHHHHHHHHHHHHhcCCceeeeeccccccCCC
Confidence 677777777775422111 223468899999999999999999876 7776543
No 133
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=34.27 E-value=88 Score=25.14 Aligned_cols=70 Identities=6% Similarity=-0.056 Sum_probs=47.0
Q ss_pred HHHHhHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 037727 97 EQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVND 176 (205)
Q Consensus 97 ~~i~~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~ 176 (205)
+.++.+++.++.+++-|++.++ .|.|..... ...+++ ..+...+++.++.+++.
T Consensus 108 ~~~~~~~~~i~~A~~lGa~~v~--~~~g~~~~~------------~~~~~~------------~~~~~~~~~~~~~~~~~ 161 (340)
T 2zds_A 108 RAAAEIKDTARAAARLGVDTVI--GFTGSAIWH------------LVAMFP------------PAPESMIERGYQDFADR 161 (340)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEE--ECCCCSSGG------------GTTCCS------------CCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCEEE--EecCCcCcc------------cccccC------------CCcccchHHHHHHHHHH
Confidence 4588999999999999998664 255532100 000000 01112356778899999
Q ss_pred HHHHHHHHHHccccee
Q 037727 177 FRIAARNAIEAEIKSS 192 (205)
Q Consensus 177 f~~AA~ra~~AGfDgV 192 (205)
+.+.+..|++.|....
T Consensus 162 l~~l~~~a~~~Gv~l~ 177 (340)
T 2zds_A 162 WNPILDVFDAEGVRFA 177 (340)
T ss_dssp HHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHcCCEEE
Confidence 9999999999998776
No 134
>1mli_A Muconolactone isomerase; intramolecular oxidoreductase; 3.30A {Pseudomonas putida} SCOP: d.58.4.1
Probab=33.37 E-value=52 Score=22.77 Aligned_cols=30 Identities=13% Similarity=0.112 Sum_probs=26.5
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHccc
Q 037727 160 TPPRRLRTGEIPQIVNDFRIAARNAIEAEI 189 (205)
Q Consensus 160 ~~~~~mt~~eI~~ii~~f~~AA~ra~~AGf 189 (205)
..|..|+.++..++...-.+.|...+++|.
T Consensus 10 ~~P~~~~~~~~~~~~a~Eka~a~eLq~~G~ 39 (96)
T 1mli_A 10 KLPVDMDPAKATQLKADEKELAQRLQREGT 39 (96)
T ss_pred eCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 347889999999999999999999999884
No 135
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=32.90 E-value=24 Score=30.21 Aligned_cols=18 Identities=17% Similarity=0.049 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHccccee
Q 037727 175 NDFRIAARNAIEAEIKSS 192 (205)
Q Consensus 175 ~~f~~AA~ra~~AGfDgV 192 (205)
++|+++|++++++|||.|
T Consensus 147 ~~~~~~a~~~~~~Gf~~i 164 (401)
T 2hzg_A 147 QETLERARAARRDGFAAV 164 (401)
T ss_dssp HHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHhCCCeE
Confidence 567899999999999999
No 136
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=32.81 E-value=44 Score=27.03 Aligned_cols=65 Identities=12% Similarity=-0.099 Sum_probs=45.2
Q ss_pred HHHHhHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 037727 97 EQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVND 176 (205)
Q Consensus 97 ~~i~~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~ 176 (205)
+.++.+++.++.+++-|++.++ .|.|...... . ....-+++.++.+++.
T Consensus 111 ~~~~~~~~~i~~A~~lGa~~v~--~~~g~~~~~~--------~---------------------~~~~~~~~~~~~~~~~ 159 (316)
T 3qxb_A 111 LGYQHLKRAIDMTAAMEVPATG--MPFGSYSAAD--------A---------------------LNPARREEIYAIARDM 159 (316)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEE--ECCBBCCHHH--------H---------------------TCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCEEE--ecCCCcCccc--------c---------------------CCcccHHHHHHHHHHH
Confidence 4578899999999999998775 2333210000 0 0011245678999999
Q ss_pred HHHHHHHHHHcccc-ee
Q 037727 177 FRIAARNAIEAEIK-SS 192 (205)
Q Consensus 177 f~~AA~ra~~AGfD-gV 192 (205)
+.+.+..|++.|.. ..
T Consensus 160 l~~l~~~a~~~Gv~~l~ 176 (316)
T 3qxb_A 160 WIELAAYAKRQGLSMLY 176 (316)
T ss_dssp HHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHhcCCeEEE
Confidence 99999999999998 54
No 137
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=32.31 E-value=66 Score=28.41 Aligned_cols=69 Identities=10% Similarity=-0.073 Sum_probs=43.5
Q ss_pred CCCCcHHHHHHHHHHhcCCCeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCeeeEecccccc
Q 037727 52 DYIPQPHAILYYSQRTTEGGFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGR 125 (205)
Q Consensus 52 ~g~~t~~~~~~y~~rA~GGGlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~~QL~H~Gr 125 (205)
+-..+++.+++.++. |--.|=+ +|+-............+++.+..++++++.++++|.++++=|+|.+.
T Consensus 43 ~~~~t~~di~~i~~~--G~N~vRi---pi~w~~~~~~~~~~~~~~~~l~~~d~vv~~a~~~Gi~vildlH~~~~ 111 (515)
T 3icg_A 43 NPMTTHAMINKIKEA--GFNTLRL---PVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDMYVIINLHHENE 111 (515)
T ss_dssp CCCCCHHHHHHHHHH--TCCEEEE---CCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEEECCSCTT
T ss_pred CCcCCHHHHHHHHHC--CCCEEEE---ccchHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEecCCCCc
Confidence 345678877776543 2223322 22211111111123357888999999999999999999999999874
No 138
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=31.67 E-value=27 Score=29.57 Aligned_cols=22 Identities=5% Similarity=-0.102 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHccccee---eccc
Q 037727 175 NDFRIAARNAIEAEIKSS---KQLG 196 (205)
Q Consensus 175 ~~f~~AA~ra~~AGfDgV---~ahG 196 (205)
++|+++|++++++||+.| .+|+
T Consensus 147 e~~~~~a~~~~~~Gf~~iKik~g~~ 171 (378)
T 2qdd_A 147 DQMLGLIAEAAAQGYRTHSAKIGGS 171 (378)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCSS
T ss_pred HHHHHHHHHHHHHhhhheeecCCCC
Confidence 567889999999999999 5654
No 139
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=31.40 E-value=26 Score=30.41 Aligned_cols=23 Identities=17% Similarity=0.252 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHccccee---eccc
Q 037727 174 VNDFRIAARNAIEAEIKSS---KQLG 196 (205)
Q Consensus 174 i~~f~~AA~ra~~AGfDgV---~ahG 196 (205)
.++++++|++++++||+.| .+||
T Consensus 180 ~e~~~~~a~~~~~~Gf~~iKik~g~g 205 (412)
T 3stp_A 180 IEAMQKEAEEAMKGGYKAFKSRFGYG 205 (412)
T ss_dssp HHHHHHHHHHHHTTTCSEEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCCEEEEecccC
Confidence 4778999999999999999 6776
No 140
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=31.38 E-value=32 Score=29.77 Aligned_cols=29 Identities=17% Similarity=0.186 Sum_probs=24.7
Q ss_pred HHhHHHHHHHHHHcCCeeeEe--cccccccc
Q 037727 99 VEAWKPIVAEVQAKGGIFFCQ--LLHAGRIS 127 (205)
Q Consensus 99 i~~l~~l~~~vH~~G~~i~~Q--L~H~Gr~~ 127 (205)
.+.|++|++++|+.|.++++- ++|.+...
T Consensus 64 ~~dfk~Lv~~aH~~Gi~VilD~V~NH~~~~~ 94 (448)
T 1g94_A 64 RAQFIDMVNRCSAAGVDIYVDTLINHMAAGS 94 (448)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECSEECSSC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeeccccCCC
Confidence 679999999999999999975 48877653
No 141
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina}
Probab=31.16 E-value=52 Score=27.63 Aligned_cols=33 Identities=9% Similarity=0.196 Sum_probs=29.8
Q ss_pred cCCHHHHHhHHHHHHHHHHcCCeeeEecccccc
Q 037727 93 IWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGR 125 (205)
Q Consensus 93 l~~d~~i~~l~~l~~~vH~~G~~i~~QL~H~Gr 125 (205)
-.+++.+..++++++.+.++|.++++-|.|..+
T Consensus 77 ~~~~~~l~~ld~vV~~a~~~Gi~vIlDlH~~~~ 109 (340)
T 3qr3_A 77 NLDSTSISKYDQLVQGCLSLGAYCIVDIHNYAR 109 (340)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCEEEEEECSTTE
T ss_pred ccCHHHHHHHHHHHHHHHHCCCEEEEEecCCcc
Confidence 357888999999999999999999999999764
No 142
>3n1g_B Desert hedgehog protein; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence, fibronectins; 1.90A {Homo sapiens} SCOP: d.65.1.2 PDB: 3n1q_B
Probab=31.13 E-value=25 Score=27.02 Aligned_cols=27 Identities=15% Similarity=0.058 Sum_probs=20.5
Q ss_pred CCCccCCHHHHHhHHHHHHHHHHc--CCe
Q 037727 89 HTPGIWTKEQVEAWKPIVAEVQAK--GGI 115 (205)
Q Consensus 89 ~~~~l~~d~~i~~l~~l~~~vH~~--G~~ 115 (205)
+.....++..++.|..|+..|... |.+
T Consensus 75 g~~~~Md~rl~d~L~~L~~~v~~~~~g~p 103 (170)
T 3n1g_B 75 GADRLMTERCKERVNALAIAVMNMWPGVR 103 (170)
T ss_dssp SGGGEECHHHHHHHHHHHHHHHHHSTTCC
T ss_pred CCcccCCHHHHHHHHHHHHHHhcccCCCc
Confidence 345567899999999999998763 544
No 143
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=31.02 E-value=26 Score=30.02 Aligned_cols=19 Identities=11% Similarity=-0.025 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHccccee
Q 037727 174 VNDFRIAARNAIEAEIKSS 192 (205)
Q Consensus 174 i~~f~~AA~ra~~AGfDgV 192 (205)
+++|+++|++++++||++|
T Consensus 176 ~e~~~~~a~~~~~~Gf~~v 194 (398)
T 2pp0_A 176 LDQVLKNVVISRENGIGGI 194 (398)
T ss_dssp HHHHHHHHHHHHHTTCSCE
T ss_pred HHHHHHHHHHHHHhCCCeE
Confidence 3567899999999999999
No 144
>2eo2_A Adult MALE hypothalamus cDNA, riken FULL-length enriched library, clone:A230045M11...; FTHFSDC1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=30.89 E-value=41 Score=21.92 Aligned_cols=16 Identities=25% Similarity=0.430 Sum_probs=13.1
Q ss_pred CCCCCCCHHHHHHHHH
Q 037727 160 TPPRRLRTGEIPQIVN 175 (205)
Q Consensus 160 ~~~~~mt~~eI~~ii~ 175 (205)
..|..||.|||.+++.
T Consensus 45 tdP~~LT~eEi~~FaR 60 (71)
T 2eo2_A 45 TDPSTLTEEEVRKFAR 60 (71)
T ss_dssp CSTTTCCHHHHHHHHH
T ss_pred CCcccCCHHHHhhcee
Confidence 5688999999988753
No 145
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=30.52 E-value=25 Score=29.51 Aligned_cols=21 Identities=19% Similarity=0.358 Sum_probs=18.1
Q ss_pred CcceeCCeecCCceEeCCCCC
Q 037727 27 TPYKMGSFNLSHRIVLAPLSR 47 (205)
Q Consensus 27 ~Pi~ig~~~lkNRiv~aPm~~ 47 (205)
...+|++.+++|.|+.+||+.
T Consensus 45 ~~~~i~g~~~~~P~~iApm~g 65 (349)
T 1p0k_A 45 ISTKIGELSSSSPIFINAMTG 65 (349)
T ss_dssp CCEEETTEEESCSEEEECCCC
T ss_pred ceeEECCcccCCceEEcCccc
Confidence 357789999999999999964
No 146
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=30.26 E-value=25 Score=29.63 Aligned_cols=19 Identities=16% Similarity=0.113 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHccccee
Q 037727 174 VNDFRIAARNAIEAEIKSS 192 (205)
Q Consensus 174 i~~f~~AA~ra~~AGfDgV 192 (205)
.++|+++|++++++|||.|
T Consensus 147 ~~~~~~~a~~~~~~Gf~~i 165 (371)
T 2ps2_A 147 PEDMRARVAKYRAKGYKGQ 165 (371)
T ss_dssp HHHHHHHHHHHHTTTCCEE
T ss_pred HHHHHHHHHHHHHhChheE
Confidence 3568999999999999999
No 147
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=29.47 E-value=69 Score=25.98 Aligned_cols=68 Identities=9% Similarity=-0.079 Sum_probs=42.6
Q ss_pred CCCCcHHHHHHHHHHhcCCCeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCeeeEeccccc
Q 037727 52 DYIPQPHAILYYSQRTTEGGFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAG 124 (205)
Q Consensus 52 ~g~~t~~~~~~y~~rA~GGGlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~~QL~H~G 124 (205)
+..++++.++..++. |--.|=+. |+-.....+......+++.+..+.++++.++++|.++++-|.|..
T Consensus 39 ~~~~~~~d~~~l~~~--G~n~vRi~---i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~Gi~vildlh~~~ 106 (320)
T 3nco_A 39 GVYIEDEYFKIIKER--GFDSVRIP---IRWSAHISEKYPYEIDKFFLDRVKHVVDVALKNDLVVIINCHHFE 106 (320)
T ss_dssp SCCCCHHHHHHHHHH--TCCEEEEC---CCGGGSBCSSTTCCBCHHHHHHHHHHHHHHHHTTCEEEEECCCCH
T ss_pred CCcCCHHHHHHHHHC--CCCEEEEe---eehHHhcCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEcCCCc
Confidence 335678877766543 32333221 221111111122346788899999999999999999999999854
No 148
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=29.47 E-value=35 Score=29.68 Aligned_cols=27 Identities=4% Similarity=0.036 Sum_probs=23.3
Q ss_pred HHhHHHHHHHHHHcCCeeeEec--ccccc
Q 037727 99 VEAWKPIVAEVQAKGGIFFCQL--LHAGR 125 (205)
Q Consensus 99 i~~l~~l~~~vH~~G~~i~~QL--~H~Gr 125 (205)
.+.|++|++++|+.|.++++-+ +|.|.
T Consensus 80 ~~df~~lv~~aH~~Gi~VilD~V~NH~~~ 108 (480)
T 1ud2_A 80 KAQLERAIGSLKSNDINVYGDVVMNHKMG 108 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEccCcccc
Confidence 6789999999999999998864 78764
No 149
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=29.39 E-value=44 Score=30.24 Aligned_cols=29 Identities=17% Similarity=0.276 Sum_probs=24.2
Q ss_pred HHhHHHHHHHHHHcCCeeeEec--ccccccc
Q 037727 99 VEAWKPIVAEVQAKGGIFFCQL--LHAGRIS 127 (205)
Q Consensus 99 i~~l~~l~~~vH~~G~~i~~QL--~H~Gr~~ 127 (205)
.+.|++|++++|+.|.++++-+ +|.|...
T Consensus 198 ~~df~~Lv~~aH~~Gi~VilD~V~NH~~~~~ 228 (601)
T 3edf_A 198 NEDFVRLSTEARKRGMGLIQDVVLSHIGKHH 228 (601)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCTTS
T ss_pred HHHHHHHHHHHHHcCCEEEEEECCcccCCcc
Confidence 5689999999999999999764 7887643
No 150
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=29.36 E-value=1.5e+02 Score=22.85 Aligned_cols=59 Identities=10% Similarity=0.057 Sum_probs=43.2
Q ss_pred HHHHhHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 037727 97 EQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVND 176 (205)
Q Consensus 97 ~~i~~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~ 176 (205)
+.++.+++.++.+++-|++.++=..|.+. . .-+.+.++.+++.
T Consensus 81 ~~~~~~~~~i~~A~~lG~~~v~~~~~p~~----------------------------------~---~~~~~~~~~~~~~ 123 (281)
T 3u0h_A 81 RELSLLPDRARLCARLGARSVTAFLWPSM----------------------------------D---EEPVRYISQLARR 123 (281)
T ss_dssp HHHHTHHHHHHHHHHTTCCEEEEECCSEE----------------------------------S---SCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEeecCCC----------------------------------C---CcchhhHHHHHHH
Confidence 34678899999999999987651111100 0 0124678999999
Q ss_pred HHHHHHHHHHccccee
Q 037727 177 FRIAARNAIEAEIKSS 192 (205)
Q Consensus 177 f~~AA~ra~~AGfDgV 192 (205)
+.+.+..|++.|....
T Consensus 124 l~~l~~~a~~~Gv~l~ 139 (281)
T 3u0h_A 124 IRQVAVELLPLGMRVG 139 (281)
T ss_dssp HHHHHHHHGGGTCEEE
T ss_pred HHHHHHHHHHcCCEEE
Confidence 9999999999999877
No 151
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=29.25 E-value=36 Score=29.24 Aligned_cols=28 Identities=18% Similarity=0.311 Sum_probs=24.0
Q ss_pred HHhHHHHHHHHHHcCCeeeEec--cccccc
Q 037727 99 VEAWKPIVAEVQAKGGIFFCQL--LHAGRI 126 (205)
Q Consensus 99 i~~l~~l~~~vH~~G~~i~~QL--~H~Gr~ 126 (205)
.+.|++|++++|+.|.++++-+ +|.+..
T Consensus 69 ~~df~~lv~~aH~~Gi~VilD~V~NH~~~~ 98 (441)
T 1lwj_A 69 EREFKEMIEAFHDSGIKVVLDLPIHHTGFL 98 (441)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTBCCTT
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCcccCc
Confidence 6789999999999999999765 687754
No 152
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=29.24 E-value=30 Score=29.68 Aligned_cols=25 Identities=20% Similarity=0.272 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHccccee---e--ccchh
Q 037727 174 VNDFRIAARNAIEAEIKSS---K--QLGYV 198 (205)
Q Consensus 174 i~~f~~AA~ra~~AGfDgV---~--ahGyL 198 (205)
.++|+++|++++++||++| . .|||+
T Consensus 150 ~~~~~~~a~~~~~~Gf~~vKik~~~~~G~~ 179 (410)
T 2qq6_A 150 NEEYIAVAREAVERGFDAIKLDVDDITGPL 179 (410)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCSSSTT
T ss_pred HHHHHHHHHHHHHcCCCEEEeeccccCCcc
Confidence 4889999999999999999 4 36774
No 153
>1q6w_A Monoamine oxidase regulatory protein, putative; structural genomics, nysgxrc T805, hot DOG fold; 2.81A {Archaeoglobus fulgidus} SCOP: d.38.1.4
Probab=29.15 E-value=13 Score=27.28 Aligned_cols=41 Identities=12% Similarity=-0.006 Sum_probs=28.1
Q ss_pred CCCCCHHHHHHHHHHHHH------HHHHHHHcccceeeccchhhhhh
Q 037727 162 PRRLRTGEIPQIVNDFRI------AARNAIEAEIKSSKQLGYVLEIE 202 (205)
Q Consensus 162 ~~~mt~~eI~~ii~~f~~------AA~ra~~AGfDgV~ahGyLl~qF 202 (205)
.+.+|.++|......-.+ -...|+++||.+.-+||.|+..+
T Consensus 28 ~~~vt~~~i~~fA~~sgD~npiH~D~~~A~~~g~~~~iahG~~~~~l 74 (161)
T 1q6w_A 28 PRTVTETDIWTFAYLTADFFPLHTDVEFAKKTIFGKPIAQGMLVLSI 74 (161)
T ss_dssp CEECCHHHHHHHHHHHTCCCHHHHCHHHHHTSTTSSCBCCHHHHHHH
T ss_pred CeEECHHHHHHHHHhhCCCCccCcCHHHHhhCCCCCcccCHHHHHHH
Confidence 467899988776542211 13566789999998898876544
No 154
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=28.97 E-value=25 Score=29.07 Aligned_cols=26 Identities=19% Similarity=0.063 Sum_probs=19.4
Q ss_pred HHHHHHHHHH-------HHHHHHHHHHccccee
Q 037727 167 TGEIPQIVND-------FRIAARNAIEAEIKSS 192 (205)
Q Consensus 167 ~~eI~~ii~~-------f~~AA~ra~~AGfDgV 192 (205)
.+-|.-+.+. =++||..|.+||.|||
T Consensus 38 IDhVAtLRnARg~~~PDpv~aA~~ae~aGAdGI 70 (278)
T 3gk0_A 38 IDHVATLRNARGTAYPDPVRAALAAEDAGADAI 70 (278)
T ss_dssp CHHHHHHHHHHSSSCSCHHHHHHHHHHTTCSEE
T ss_pred hHhhhhhhccCCCCCCCHHHHHHHHHHcCCCEE
Confidence 4445555543 3689999999999999
No 155
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=28.79 E-value=28 Score=29.69 Aligned_cols=18 Identities=6% Similarity=-0.042 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHccccee
Q 037727 175 NDFRIAARNAIEAEIKSS 192 (205)
Q Consensus 175 ~~f~~AA~ra~~AGfDgV 192 (205)
++|+++|++++++||++|
T Consensus 147 e~~~~~a~~~~~~Gf~~v 164 (397)
T 2qde_A 147 EAVAEEALAVLREGFHFV 164 (397)
T ss_dssp HHHHHHHHHHHHHTCSCE
T ss_pred HHHHHHHHHHHHhhhhhe
Confidence 677899999999999999
No 156
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=28.78 E-value=37 Score=29.58 Aligned_cols=27 Identities=7% Similarity=0.172 Sum_probs=23.3
Q ss_pred HHhHHHHHHHHHHcCCeeeEe--cccccc
Q 037727 99 VEAWKPIVAEVQAKGGIFFCQ--LLHAGR 125 (205)
Q Consensus 99 i~~l~~l~~~vH~~G~~i~~Q--L~H~Gr 125 (205)
.+.|++|++++|+.|.+|++- ++|.+.
T Consensus 78 ~~df~~lv~~aH~~Gi~VilD~V~NH~~~ 106 (483)
T 3bh4_A 78 KSELQDAIGSLHSRNVQVYGDVVLNHKAG 106 (483)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEccCcccC
Confidence 678999999999999999986 478764
No 157
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=28.72 E-value=1.4e+02 Score=25.17 Aligned_cols=62 Identities=10% Similarity=0.028 Sum_probs=44.0
Q ss_pred HHHHhHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 037727 97 EQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVND 176 (205)
Q Consensus 97 ~~i~~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~ 176 (205)
+.++.+++.++.+++-|++.++ .|.|+.+... | ...-.++.++.+++.
T Consensus 113 ~~i~~~~~~i~~A~~LGa~~vv--v~~G~~g~~~----------~--------------------~~~~~~~~~~~~~e~ 160 (394)
T 1xla_A 113 FALAKVLHNIDLAAEMGAETFV--MWGGREGSEY----------D--------------------GSKDLAAALDRMREG 160 (394)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEE--ECCTTCEESS----------G--------------------GGCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCEEE--ECCCCCcccc----------c--------------------cccCHHHHHHHHHHH
Confidence 4578899999999999998654 3555321100 0 011136778999999
Q ss_pred HHHHHHHHHHcccc
Q 037727 177 FRIAARNAIEAEIK 190 (205)
Q Consensus 177 f~~AA~ra~~AGfD 190 (205)
+.+.+..|++.|++
T Consensus 161 L~~l~~~A~~~G~~ 174 (394)
T 1xla_A 161 VDTAAGYIKDKGYN 174 (394)
T ss_dssp HHHHHHHHHHHTCC
T ss_pred HHHHHHHHHhcCCC
Confidence 99999999999943
No 158
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=28.66 E-value=31 Score=29.43 Aligned_cols=24 Identities=8% Similarity=-0.050 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHccccee---eccch
Q 037727 174 VNDFRIAARNAIEAEIKSS---KQLGY 197 (205)
Q Consensus 174 i~~f~~AA~ra~~AGfDgV---~ahGy 197 (205)
+++++++|++++++||+.| .+|+.
T Consensus 166 ~~~~~~~a~~~~~~Gf~~iKik~g~~~ 192 (392)
T 1tzz_A 166 LSMLRGEMRGYLDRGYNVVKMKIGGAP 192 (392)
T ss_dssp HHHHHHHHHHHHTTTCSEEEEECSSSC
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCC
Confidence 4668899999999999999 66643
No 159
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=28.54 E-value=47 Score=30.18 Aligned_cols=28 Identities=21% Similarity=0.178 Sum_probs=24.1
Q ss_pred HHhHHHHHHHHHHcCCeeeEec--cccccc
Q 037727 99 VEAWKPIVAEVQAKGGIFFCQL--LHAGRI 126 (205)
Q Consensus 99 i~~l~~l~~~vH~~G~~i~~QL--~H~Gr~ 126 (205)
.+.|+++++++|+.|.++++-+ +|.+..
T Consensus 192 ~~d~~~lv~~~H~~Gi~VilD~V~NH~~~~ 221 (602)
T 2bhu_A 192 PEDLMALVDAAHRLGLGVFLDVVYNHFGPS 221 (602)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSCCCSS
T ss_pred HHHHHHHHHHHHHCCCEEEEEecccccccC
Confidence 7899999999999999999865 777653
No 160
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=28.20 E-value=31 Score=29.02 Aligned_cols=18 Identities=0% Similarity=-0.114 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHccccee
Q 037727 175 NDFRIAARNAIEAEIKSS 192 (205)
Q Consensus 175 ~~f~~AA~ra~~AGfDgV 192 (205)
++|+++|++++++||+.|
T Consensus 143 ~~~~~~a~~~~~~Gf~~v 160 (368)
T 1sjd_A 143 PQLLDVVGGYLDEGYVRI 160 (368)
T ss_dssp HHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHHHhCccEE
Confidence 557889999999999998
No 161
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=28.14 E-value=39 Score=29.48 Aligned_cols=27 Identities=15% Similarity=0.256 Sum_probs=23.4
Q ss_pred HHhHHHHHHHHHHcCCeeeEec--ccccc
Q 037727 99 VEAWKPIVAEVQAKGGIFFCQL--LHAGR 125 (205)
Q Consensus 99 i~~l~~l~~~vH~~G~~i~~QL--~H~Gr 125 (205)
.+.|++|++++|+.|.+|++-+ +|.|.
T Consensus 82 ~~df~~Lv~~aH~~Gi~VilD~V~NH~~~ 110 (485)
T 1wpc_A 82 RSQLQAAVTSLKNNGIQVYGDVVMNHKGG 110 (485)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEECS
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeccccCC
Confidence 6789999999999999999864 78764
No 162
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=28.10 E-value=38 Score=29.61 Aligned_cols=28 Identities=7% Similarity=0.116 Sum_probs=23.7
Q ss_pred HHhHHHHHHHHHHcCCeeeEec--cccccc
Q 037727 99 VEAWKPIVAEVQAKGGIFFCQL--LHAGRI 126 (205)
Q Consensus 99 i~~l~~l~~~vH~~G~~i~~QL--~H~Gr~ 126 (205)
.+.|++|++++|+.|.+|++=+ +|.|..
T Consensus 79 ~~dfk~Lv~~aH~~Gi~VilD~V~NHts~~ 108 (549)
T 4aie_A 79 MADMDELISKAKEHHIKIVMDLVVNHTSDQ 108 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCTT
T ss_pred HHHHHHHHHHHHHCCCEEEEEECccCCcCC
Confidence 5689999999999999999865 787753
No 163
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=28.09 E-value=40 Score=28.75 Aligned_cols=29 Identities=14% Similarity=0.169 Sum_probs=24.2
Q ss_pred HHhHHHHHHHHHHcCCeeeEe--cccccccc
Q 037727 99 VEAWKPIVAEVQAKGGIFFCQ--LLHAGRIS 127 (205)
Q Consensus 99 i~~l~~l~~~vH~~G~~i~~Q--L~H~Gr~~ 127 (205)
.+.|++|++++|+.|.++++- ++|.+...
T Consensus 68 ~~d~~~lv~~~h~~Gi~VilD~V~NH~~~~~ 98 (405)
T 1ht6_A 68 AAELKSLIGALHGKGVQAIADIVINHRCADY 98 (405)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCCSE
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcCcccCCC
Confidence 678999999999999999875 57876543
No 164
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=27.96 E-value=39 Score=29.13 Aligned_cols=28 Identities=14% Similarity=0.103 Sum_probs=24.1
Q ss_pred HHhHHHHHHHHHHcCCeeeEe--ccccccc
Q 037727 99 VEAWKPIVAEVQAKGGIFFCQ--LLHAGRI 126 (205)
Q Consensus 99 i~~l~~l~~~vH~~G~~i~~Q--L~H~Gr~ 126 (205)
.+.|++|++++|+.|.++++- ++|.+..
T Consensus 86 ~~df~~lv~~~H~~Gi~VilD~V~NH~~~~ 115 (435)
T 1mxg_A 86 KEELVRLIQTAHAYGIKVIADVVINHRAGG 115 (435)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcccccCC
Confidence 678999999999999999986 4787754
No 165
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=27.93 E-value=2.2e+02 Score=22.32 Aligned_cols=20 Identities=10% Similarity=-0.114 Sum_probs=17.5
Q ss_pred HHHHHHHHHHcCCeeeEecc
Q 037727 102 WKPIVAEVQAKGGIFFCQLL 121 (205)
Q Consensus 102 l~~l~~~vH~~G~~i~~QL~ 121 (205)
+.++++.++++|.++++=|+
T Consensus 95 ~~~~i~~i~~~G~k~gv~ln 114 (231)
T 3ctl_A 95 AFRLIDEIRRHDMKVGLILN 114 (231)
T ss_dssp HHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHcCCeEEEEEE
Confidence 56889999999999998885
No 166
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=27.81 E-value=31 Score=29.92 Aligned_cols=18 Identities=17% Similarity=0.128 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHccccee
Q 037727 175 NDFRIAARNAIEAEIKSS 192 (205)
Q Consensus 175 ~~f~~AA~ra~~AGfDgV 192 (205)
++|+++|++++++||++|
T Consensus 187 e~~~~~a~~~~~~Gf~~v 204 (428)
T 3bjs_A 187 ESLAEEAQEYIARGYKAL 204 (428)
T ss_dssp HHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHHHCCCCEE
Confidence 778999999999999999
No 167
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=27.32 E-value=41 Score=29.31 Aligned_cols=28 Identities=11% Similarity=0.233 Sum_probs=24.4
Q ss_pred HHhHHHHHHHHHHcCCeeeEe--ccccccc
Q 037727 99 VEAWKPIVAEVQAKGGIFFCQ--LLHAGRI 126 (205)
Q Consensus 99 i~~l~~l~~~vH~~G~~i~~Q--L~H~Gr~ 126 (205)
.+.|++|++++|+.|.++++- ++|.+..
T Consensus 74 ~~d~~~lv~~~h~~Gi~VilD~V~NH~~~~ 103 (471)
T 1jae_A 74 ESAFTDMTRRCNDAGVRIYVDAVINHMTGM 103 (471)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCSS
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecccccCC
Confidence 789999999999999999885 4887765
No 168
>3l55_A B-1,4-endoglucanase/cellulase; putative beta-1,4-endoglucanase, glycosyl hydrolase family 5, mixed alpha-beta, TIM barrel; HET: MSE; 1.60A {Prevotella bryantii} PDB: 3vdh_A*
Probab=27.26 E-value=56 Score=27.53 Aligned_cols=30 Identities=17% Similarity=0.062 Sum_probs=28.2
Q ss_pred CCHHHHHhHHHHHHHHHHcCCeeeEecccc
Q 037727 94 WTKEQVEAWKPIVAEVQAKGGIFFCQLLHA 123 (205)
Q Consensus 94 ~~d~~i~~l~~l~~~vH~~G~~i~~QL~H~ 123 (205)
.+++.+..++++++.+.++|.++++=|+|.
T Consensus 85 ~d~~~l~~ld~vVd~a~~~Gi~vIldlH~~ 114 (353)
T 3l55_A 85 VDEAWMMRVKAIVEYAMNAGLYAIVNVHHD 114 (353)
T ss_dssp BCHHHHHHHHHHHHHHHHHTCEEEEECCTT
T ss_pred cCHHHHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 578899999999999999999999999996
No 169
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=27.23 E-value=41 Score=29.20 Aligned_cols=28 Identities=14% Similarity=0.310 Sum_probs=24.1
Q ss_pred HHhHHHHHHHHHHcCCeeeEec--cccccc
Q 037727 99 VEAWKPIVAEVQAKGGIFFCQL--LHAGRI 126 (205)
Q Consensus 99 i~~l~~l~~~vH~~G~~i~~QL--~H~Gr~ 126 (205)
.+.|++|++++|+.|.+|++-+ +|.+..
T Consensus 97 ~~df~~lv~~~H~~Gi~VilD~V~NH~~~~ 126 (478)
T 2guy_A 97 ADDLKALSSALHERGMYLMVDVVANHMGYD 126 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcccCCCC
Confidence 6789999999999999999864 787764
No 170
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=27.22 E-value=2.1e+02 Score=22.78 Aligned_cols=22 Identities=9% Similarity=-0.189 Sum_probs=17.8
Q ss_pred hHHHHHHHHHHcCCeeeEeccc
Q 037727 101 AWKPIVAEVQAKGGIFFCQLLH 122 (205)
Q Consensus 101 ~l~~l~~~vH~~G~~i~~QL~H 122 (205)
.+.++++.++++|.++.+=|+-
T Consensus 122 ~~~~~i~~ir~~G~k~Gvalnp 143 (246)
T 3inp_A 122 HIDRSLQLIKSFGIQAGLALNP 143 (246)
T ss_dssp CHHHHHHHHHTTTSEEEEEECT
T ss_pred hHHHHHHHHHHcCCeEEEEecC
Confidence 3578888999999999887763
No 171
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=26.44 E-value=43 Score=29.72 Aligned_cols=29 Identities=10% Similarity=0.030 Sum_probs=24.9
Q ss_pred HHhHHHHHHHHHHcCCeeeEe--cccccccc
Q 037727 99 VEAWKPIVAEVQAKGGIFFCQ--LLHAGRIS 127 (205)
Q Consensus 99 i~~l~~l~~~vH~~G~~i~~Q--L~H~Gr~~ 127 (205)
.+.|++|++++|+.|.++++- ++|.+...
T Consensus 92 ~~dfk~Lv~~aH~~GI~VilD~V~NHt~~~~ 122 (527)
T 1gcy_A 92 DAQLRQAASALGGAGVKVLYDVVPNHMNRGY 122 (527)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCTTC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeecCcCCCC
Confidence 789999999999999999986 48877654
No 172
>1l8n_A Alpha-D-glucuronidase; hydrolase; HET: GCW XYP; 1.50A {Geobacillus stearothermophilus} SCOP: c.1.8.10 d.92.2.2 PDB: 1k9d_A* 1mqq_A* 1mqp_A 1mqr_A* 1k9f_A* 1k9e_A*
Probab=26.20 E-value=1.2e+02 Score=28.35 Aligned_cols=61 Identities=13% Similarity=0.032 Sum_probs=46.4
Q ss_pred HHHHHHHHHHhcCC-CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCeeeEecccc
Q 037727 57 PHAILYYSQRTTEG-GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHA 123 (205)
Q Consensus 57 ~~~~~~y~~rA~GG-GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~~QL~H~ 123 (205)
++..+|=+..|.=| =-|++-++.|+.. .+.+-+++.++.+++|+|..+.||.++.+-++-+
T Consensus 178 ~R~~dYAR~lASiGINgvvlNNVNv~~a------~~~~Lt~~~l~~v~~lAd~fRpYGIkv~LSvnFa 239 (679)
T 1l8n_A 178 QRIKDYARLLASVGINAISINNVNVHKT------ETKLITDHFLPDVAEVADIFRTYGIKTFLSINYA 239 (679)
T ss_dssp HHHHHHHHHHHHTTCCEEECSCSSCCTT------GGGGGSTTTHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred hhHHHHHHHHhhcCcceEEecccccccc------cccccCHHHHHHHHHHHHHHhhccceEEEEEecc
Confidence 67888888888777 4455556665541 2345688999999999999999999999887754
No 173
>2lky_A Uncharacterized protein; infectious disease, tuberculosis, DUF proteins, ssgcid, STRU genomics; NMR {Mycobacterium smegmatis str}
Probab=25.93 E-value=50 Score=23.50 Aligned_cols=19 Identities=37% Similarity=0.529 Sum_probs=16.7
Q ss_pred CCCCCHHHHHHHHHHHHHH
Q 037727 162 PRRLRTGEIPQIVNDFRIA 180 (205)
Q Consensus 162 ~~~mt~~eI~~ii~~f~~A 180 (205)
.|.||++||.++++.+...
T Consensus 38 ~r~Ltdeev~~Va~~L~~~ 56 (112)
T 2lky_A 38 TRRLTNDEIKAIAEDLEKR 56 (112)
T ss_dssp TTTCCHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHc
Confidence 4789999999999999755
No 174
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=25.70 E-value=43 Score=28.67 Aligned_cols=29 Identities=14% Similarity=0.083 Sum_probs=24.2
Q ss_pred HHHhHHHHHHHHHHcCCeeeEec--cccccc
Q 037727 98 QVEAWKPIVAEVQAKGGIFFCQL--LHAGRI 126 (205)
Q Consensus 98 ~i~~l~~l~~~vH~~G~~i~~QL--~H~Gr~ 126 (205)
-.+.|+++++++|+.|.++++-+ +|.+..
T Consensus 73 ~~~d~~~lv~~~h~~Gi~VilD~V~NH~~~~ 103 (422)
T 1ua7_A 73 TEQEFKEMCAAAEEYGIKVIVDAVINHTTFD 103 (422)
T ss_dssp EHHHHHHHHHHHHTTTCEEEEEECCSBCCSC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeccCcccCC
Confidence 36789999999999999998754 777654
No 175
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=25.52 E-value=46 Score=28.81 Aligned_cols=28 Identities=25% Similarity=0.229 Sum_probs=24.0
Q ss_pred HHhHHHHHHHHHHcCCeeeEec--cccccc
Q 037727 99 VEAWKPIVAEVQAKGGIFFCQL--LHAGRI 126 (205)
Q Consensus 99 i~~l~~l~~~vH~~G~~i~~QL--~H~Gr~ 126 (205)
.+.|+++++++|+.|.++++-+ +|.+..
T Consensus 96 ~~df~~lv~~~h~~Gi~VilD~V~NH~~~~ 125 (475)
T 2z1k_A 96 NEALRHLLEVAHAHGVRVILDGVFNHTGRG 125 (475)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCTT
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecccccCC
Confidence 6899999999999999999865 787643
No 176
>1itu_A Renal dipeptidase; glycoprotein, membrane-bound, zinc protease BET lactamase, cilastatin, complex (hydrolase-inhibitor), hydro; HET: NAG CIL; 2.00A {Homo sapiens} SCOP: c.1.9.7 PDB: 1itq_A*
Probab=25.27 E-value=34 Score=29.41 Aligned_cols=66 Identities=14% Similarity=0.167 Sum_probs=39.3
Q ss_pred HHhHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 037727 99 VEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVN 175 (205)
Q Consensus 99 i~~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii~ 175 (205)
-+.=+++++++.+.|. ++-|.|.+..+..+.......|+-.|...... -...||-||.++|+.|.+
T Consensus 177 T~~G~~vV~emnrlGm--ivDlSH~s~~~~~dvl~~s~~PviaSHSn~ra---------l~~h~RNl~De~l~~la~ 242 (369)
T 1itu_A 177 SPFGQRVVKELNRLGV--LIDLAHVSVATMKATLQLSRAPVIFSHSSAYS---------VCASRRNVPDDVLRLVKQ 242 (369)
T ss_dssp CHHHHHHHHHHHHHTC--EEECTTBCHHHHHHHHHHCSSCCEESSCCBTT---------TSCCTTSBCHHHHHHHHH
T ss_pred CHhHHHHHHHHHHcCC--EEEcCCCCHHHHHHHHHhcCCCEEEeCCChhh---------cCCCCCCCCHHHHHHHHH
Confidence 4456889999999994 68999988765432100011233334322110 124578899999988754
No 177
>3h3h_A Uncharacterized snoal-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE UNL MES; 1.60A {Burkholderia thailandensis E264}
Probab=25.20 E-value=48 Score=22.56 Aligned_cols=18 Identities=11% Similarity=-0.012 Sum_probs=16.1
Q ss_pred CCCHHHHHHHHHHHHHHH
Q 037727 164 RLRTGEIPQIVNDFRIAA 181 (205)
Q Consensus 164 ~mt~~eI~~ii~~f~~AA 181 (205)
.||.++++++++.|.+|-
T Consensus 4 ~m~~~~~~~~~~~~~~a~ 21 (122)
T 3h3h_A 4 PITQAFAQQFSREWIDAW 21 (122)
T ss_dssp CCCHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHH
Confidence 599999999999999864
No 178
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=25.13 E-value=47 Score=28.93 Aligned_cols=28 Identities=18% Similarity=0.306 Sum_probs=24.1
Q ss_pred HHhHHHHHHHHHHcCCeeeEec--cccccc
Q 037727 99 VEAWKPIVAEVQAKGGIFFCQL--LHAGRI 126 (205)
Q Consensus 99 i~~l~~l~~~vH~~G~~i~~QL--~H~Gr~ 126 (205)
.+.|++|++++|+.|.++++=+ +|.+..
T Consensus 81 ~~d~~~Lv~~aH~~Gi~VilD~V~NH~s~~ 110 (488)
T 1wza_A 81 LEDFHKLVEAAHQRGIKVIIDLPINHTSER 110 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCSBCCTT
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccccccCc
Confidence 7899999999999999999865 787654
No 179
>2eq5_A 228AA long hypothetical hydantoin racemase; structural genomics, NPPSFA, national project on P structural and functional analyses; 2.20A {Pyrococcus horikoshii}
Probab=25.13 E-value=1.2e+02 Score=23.30 Aligned_cols=31 Identities=3% Similarity=-0.107 Sum_probs=22.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHccccee--eccc
Q 037727 166 RTGEIPQIVNDFRIAARNAIEAEIKSS--KQLG 196 (205)
Q Consensus 166 t~~eI~~ii~~f~~AA~ra~~AGfDgV--~ahG 196 (205)
+..+.........+++++..++|+|+| +|+.
T Consensus 53 ~~~~~~~~~~~l~~~~~~l~~~g~d~iviaCnt 85 (228)
T 2eq5_A 53 NEETEREAEPKIIRLAKEFEREGVDAIIISCAA 85 (228)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTTCSEEEECSTT
T ss_pred ccccHHHhHHHHHHHHHHHHHCCCCEEEEeCCc
Confidence 334455566688888988999999999 5553
No 180
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=25.12 E-value=41 Score=26.61 Aligned_cols=20 Identities=20% Similarity=0.174 Sum_probs=16.3
Q ss_pred HHHHHHHHHccccee-eccch
Q 037727 178 RIAARNAIEAEIKSS-KQLGY 197 (205)
Q Consensus 178 ~~AA~ra~~AGfDgV-~ahGy 197 (205)
+.|++.|.++|.|.| ..-||
T Consensus 136 ~~a~~ia~eaGADfVKTsTGf 156 (220)
T 1ub3_A 136 ARLAEAAIRGGADFLKTSTGF 156 (220)
T ss_dssp HHHHHHHHHHTCSEEECCCSS
T ss_pred HHHHHHHHHhCCCEEEeCCCC
Confidence 468999999999999 55554
No 181
>2kvc_A Putative uncharacterized protein; structural genomics, seattle structural genomi for infectious disease, ssgcid, unknown function; NMR {Mycobacterium tuberculosis}
Probab=25.04 E-value=53 Score=23.01 Aligned_cols=19 Identities=26% Similarity=0.391 Sum_probs=16.6
Q ss_pred CCCCCHHHHHHHHHHHHHH
Q 037727 162 PRRLRTGEIPQIVNDFRIA 180 (205)
Q Consensus 162 ~~~mt~~eI~~ii~~f~~A 180 (205)
.+.||++||.+++..+...
T Consensus 36 ~r~Ltdeev~~Va~~L~~~ 54 (103)
T 2kvc_A 36 CRRLSHDEVKAVANELMRL 54 (103)
T ss_dssp TTTSCHHHHHHHHHHHHHH
T ss_pred hccCCHHHHHHHHHHHHHc
Confidence 3789999999999999865
No 182
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=25.01 E-value=95 Score=23.86 Aligned_cols=62 Identities=10% Similarity=0.043 Sum_probs=44.0
Q ss_pred HHHHhHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 037727 97 EQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVND 176 (205)
Q Consensus 97 ~~i~~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~ 176 (205)
+.++.+++.++.+++-|++.++ .|.|.... ..+ .-.++.++.+++.
T Consensus 73 ~~~~~~~~~i~~A~~lGa~~v~--~~~g~~~~-------------------------------~~~-~~~~~~~~~~~~~ 118 (254)
T 3ayv_A 73 LTLRRLLFGLDRAAELGADRAV--FHSGIPHG-------------------------------RTP-EEALERALPLAEA 118 (254)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEE--EECCCCTT-------------------------------CCH-HHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCEEE--ECCCCCcc-------------------------------ccc-ccHHHHHHHHHHH
Confidence 4578899999999999998763 35543110 000 0124558899999
Q ss_pred HHHHHHHHHHccccee
Q 037727 177 FRIAARNAIEAEIKSS 192 (205)
Q Consensus 177 f~~AA~ra~~AGfDgV 192 (205)
+.+.+..|++.|....
T Consensus 119 l~~l~~~a~~~gv~l~ 134 (254)
T 3ayv_A 119 LGLVVRRARTLGVRLL 134 (254)
T ss_dssp THHHHHHHHHHTCEEE
T ss_pred HHHHHHHHhhcCCEEE
Confidence 9999999999998766
No 183
>3ly0_A Dipeptidase AC. metallo peptidase. merops family M19; structural genomics, nysgrc, target 9523C, phosphinate inhibitor, PSI-2; HET: LY0; 1.40A {Rhodobacter sphaeroides} PDB: 3fdg_A
Probab=24.99 E-value=32 Score=29.57 Aligned_cols=65 Identities=20% Similarity=0.205 Sum_probs=38.3
Q ss_pred HhHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 037727 100 EAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVN 175 (205)
Q Consensus 100 ~~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii~ 175 (205)
+.=+++++++.+.| +++=|+|.+..+..+.......|+-.|...... -...||-+|.++|+.|.+
T Consensus 192 ~~G~~vV~emnrlG--mivDlSH~s~~t~~dvl~~s~~PviaSHSnara---------l~~h~RNl~De~l~ala~ 256 (364)
T 3ly0_A 192 EAGRRLVAECNRLK--IMLDLSHLNEKGFDDVARLSDAPLVATHSNAHA---------VTPSTRNLTDRQLAMIRE 256 (364)
T ss_dssp HHHHHHHHHHHHHT--CEEBCTTBCHHHHHHHHHHCSSCCEETTCCBTT---------TSCCTTSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC--CEEEcCCCCHHHHHHHHHhcCCCeEEeCCchhh---------cCCCCCCCCHHHHHHHHH
Confidence 45578888999999 468999988765432100011233334322111 124578899999888753
No 184
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=24.98 E-value=43 Score=27.83 Aligned_cols=18 Identities=11% Similarity=0.106 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHccccee
Q 037727 175 NDFRIAARNAIEAEIKSS 192 (205)
Q Consensus 175 ~~f~~AA~ra~~AGfDgV 192 (205)
++|+++|++++++||+.|
T Consensus 141 ~~~~~~a~~~~~~Gf~~i 158 (345)
T 2zad_A 141 ENRVKEAKKIFEEGFRVI 158 (345)
T ss_dssp HHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHcCcCEE
Confidence 457889999999999999
No 185
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A*
Probab=24.88 E-value=1.1e+02 Score=25.44 Aligned_cols=31 Identities=13% Similarity=0.148 Sum_probs=28.2
Q ss_pred CCHHHHHhHHHHHHHHHHcCCeeeEeccccc
Q 037727 94 WTKEQVEAWKPIVAEVQAKGGIFFCQLLHAG 124 (205)
Q Consensus 94 ~~d~~i~~l~~l~~~vH~~G~~i~~QL~H~G 124 (205)
.+.+.+..++++++.+.++|.++++=|.|.+
T Consensus 97 ~~~~~l~~~~~vv~~a~~~Gi~vildlH~~~ 127 (376)
T 3ayr_A 97 IDEKWLKRVHEVVDYPYKNGAFVILNLHHET 127 (376)
T ss_dssp BCHHHHHHHHHHHHHHHTTTCEEEEECCSCS
T ss_pred cCHHHHHHHHHHHHHHHHCCCEEEEECCCcc
Confidence 5778899999999999999999999999864
No 186
>1gqi_A Alpha-glucuronidase; (alpha-beta)8 barrel, glycoside hydrolase; 1.48A {Pseudomonas cellulosa} SCOP: c.1.8.10 d.92.2.2 PDB: 1gqj_A* 1gqk_A* 1gql_A* 1h41_A*
Probab=24.81 E-value=1.6e+02 Score=27.54 Aligned_cols=60 Identities=13% Similarity=0.222 Sum_probs=46.0
Q ss_pred CCcHHHHHHHHHHhcCC--CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCeeeEecccc
Q 037727 54 IPQPHAILYYSQRTTEG--GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHA 123 (205)
Q Consensus 54 ~~t~~~~~~y~~rA~GG--GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~~QL~H~ 123 (205)
...++..+|-+..|.=| |++| - -|+. .+.+-+++.++.+++|+|..+.||.++.+-++-+
T Consensus 181 ~~~~R~~dYAR~lASiGINgvvl-N--NVNa-------~~~~lt~~~l~~v~~lAd~fRpYGIkv~LSvnFa 242 (708)
T 1gqi_A 181 YLAPRYTDYARINASLGINGTVI-N--NVNA-------DPRVLSDQFLQKIAALADAFRPYGIKMYLSINFN 242 (708)
T ss_dssp CCCHHHHHHHHHHHTTTCCEEEC-S--CSSC-------CGGGGSHHHHHHHHHHHHHHGGGTCEEEEEECTT
T ss_pred ccHHHHHHHHHHHhhcCcceEEe-c--CCCC-------CcccCCcHHHHHHHHHHHHHHhhcCeEEEEeccc
Confidence 44678888888888777 6665 2 2332 2446789999999999999999999999877654
No 187
>3fj0_A Beta-glucosidase; BGLB,BGL, hydrolase, glycosidase; HET: BGC; 1.15A {Uncultured bacterium} PDB: 3cmj_A 3fiz_A* 3fiy_A*
Probab=24.81 E-value=65 Score=28.47 Aligned_cols=33 Identities=9% Similarity=0.191 Sum_probs=29.9
Q ss_pred ccCCHHHHHhHHHHHHHHHHcCCeeeEeccccc
Q 037727 92 GIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAG 124 (205)
Q Consensus 92 ~l~~d~~i~~l~~l~~~vH~~G~~i~~QL~H~G 124 (205)
+-.+.+-+..+.++++.++++|..+++=|.|.+
T Consensus 111 g~~n~~Gl~~y~~lid~l~~~GI~pivtL~H~d 143 (465)
T 3fj0_A 111 RQINQRGLDFYRRLVEGLHKRDILPMATLYHWD 143 (465)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSC
T ss_pred CCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 346889999999999999999999999999965
No 188
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=24.59 E-value=41 Score=29.21 Aligned_cols=18 Identities=11% Similarity=0.217 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHccccee
Q 037727 175 NDFRIAARNAIEAEIKSS 192 (205)
Q Consensus 175 ~~f~~AA~ra~~AGfDgV 192 (205)
++|+++|++++++||+.|
T Consensus 200 e~~~~~a~~~~~~Gf~~v 217 (441)
T 2hxt_A 200 EKLVRLAKEAVADGFRTI 217 (441)
T ss_dssp HHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHcCCCEE
Confidence 568899999999999999
No 189
>2ns6_A Mobilization protein A; nickase, 5-strand antiparallel beta sheet, metalloenzyme, hydrolase; 2.10A {Pseudomonas aeruginosa}
Probab=24.37 E-value=55 Score=25.17 Aligned_cols=21 Identities=14% Similarity=0.229 Sum_probs=18.9
Q ss_pred CCCCCCHHHHHHHHHHHHHHH
Q 037727 161 PPRRLRTGEIPQIVNDFRIAA 181 (205)
Q Consensus 161 ~~~~mt~~eI~~ii~~f~~AA 181 (205)
.|+|||.++=.+++++|++.-
T Consensus 78 LP~EL~~eq~~~L~~~f~~~~ 98 (185)
T 2ns6_A 78 LPVELTLDQQKALASEFAQHL 98 (185)
T ss_dssp CCTTSCHHHHHHHHHHHHHHH
T ss_pred CCccCCHHHHHHHHHHHHHHH
Confidence 479999999999999999873
No 190
>1ug6_A Beta-glycosidase; glucosidase, atomic resolution, riken structural genomics/PR initiative, RSGI, structural genomics, hydrolase; 0.99A {Thermus thermophilus} SCOP: c.1.8.4 PDB: 1np2_A
Probab=24.26 E-value=67 Score=28.05 Aligned_cols=33 Identities=18% Similarity=0.160 Sum_probs=29.8
Q ss_pred cCCHHHHHhHHHHHHHHHHcCCeeeEecccccc
Q 037727 93 IWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGR 125 (205)
Q Consensus 93 l~~d~~i~~l~~l~~~vH~~G~~i~~QL~H~Gr 125 (205)
-.+++-+..+.++++.++++|..+++=|.|.+.
T Consensus 90 ~~n~~gl~~y~~~id~l~~~GI~p~vtL~H~d~ 122 (431)
T 1ug6_A 90 RINPKGLAFYDRLVDRLLASGITPFLTLYHWDL 122 (431)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCC
T ss_pred CcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCCC
Confidence 368889999999999999999999999999654
No 191
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=24.17 E-value=43 Score=28.13 Aligned_cols=18 Identities=17% Similarity=0.152 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHccccee
Q 037727 175 NDFRIAARNAIEAEIKSS 192 (205)
Q Consensus 175 ~~f~~AA~ra~~AGfDgV 192 (205)
++|+++|++++++||+.|
T Consensus 143 ~~~~~~a~~~~~~Gf~~i 160 (369)
T 2p8b_A 143 ENMAEEAASMIQKGYQSF 160 (369)
T ss_dssp HHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHcCcCEE
Confidence 457899999999999999
No 192
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=24.15 E-value=2e+02 Score=24.00 Aligned_cols=62 Identities=8% Similarity=0.036 Sum_probs=43.5
Q ss_pred HHHHhHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 037727 97 EQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVND 176 (205)
Q Consensus 97 ~~i~~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~ 176 (205)
+.++.+++.++.+++-|++.++ .|.|..+. . .| ...-..+.++.+++.
T Consensus 113 ~~i~~~~~~i~~A~~LGa~~vv--v~~g~~~~-~---------~~--------------------~~~~~~~~~~~~~e~ 160 (386)
T 1muw_A 113 YALRKTIRNIDLAVELGAKTYV--AWGGREGA-E---------SG--------------------AAKDVRVALDRMKEA 160 (386)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEE--ECCTTCEE-S---------ST--------------------TSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCEEE--ECCCCCcc-c---------cc--------------------ccCCHHHHHHHHHHH
Confidence 4578999999999999998654 34553110 0 00 001135678999999
Q ss_pred HHHHHHHHHHcccc
Q 037727 177 FRIAARNAIEAEIK 190 (205)
Q Consensus 177 f~~AA~ra~~AGfD 190 (205)
+.+.+..|.+.|+|
T Consensus 161 L~~l~~~A~~~G~~ 174 (386)
T 1muw_A 161 FDLLGEYVTSQGYD 174 (386)
T ss_dssp HHHHHHHHHHHTCC
T ss_pred HHHHHHHHHhcCCC
Confidence 99999999999943
No 193
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=23.88 E-value=52 Score=28.30 Aligned_cols=59 Identities=10% Similarity=0.009 Sum_probs=35.4
Q ss_pred HHhcCC-CeEEEecceeccCCCCCCCC-CccCCHH--HHHhHHHHHHHHHHcCCeeeEec--cccc
Q 037727 65 QRTTEG-GFLISEASVVSETGRGYKHT-PGIWTKE--QVEAWKPIVAEVQAKGGIFFCQL--LHAG 124 (205)
Q Consensus 65 ~rA~GG-GlIi~~~~~V~~~g~~~~~~-~~l~~d~--~i~~l~~l~~~vH~~G~~i~~QL--~H~G 124 (205)
..+.=| -.|....++-++........ ..+ ++. -.+.+++|++++|+.|-++++-+ +|.+
T Consensus 44 yl~~LGv~~i~l~Pi~~~~~~~y~~~dy~~i-dp~~Gt~~d~~~lv~~ah~~Gi~vilD~V~NH~s 108 (424)
T 2dh2_A 44 YLSSLKVKGLVLGPIHKNQKDDVAQTDLLQI-DPNFGSKEDFDSLLQSAKKKSIRVILDLTPNYRG 108 (424)
T ss_dssp HHHHTTCSEEEECCCEEECTTCSTTEEEEEE-CGGGCCHHHHHHHHHHHHHTTCEEEEECCTTTTS
T ss_pred HHHHcCCCEEEECCCCCCCCCCCCccccccc-CccCCCHHHHHHHHHHHHHCCCEEEEEECCCcCC
Confidence 334446 66666666655532211100 011 121 37899999999999999999865 5555
No 194
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=23.84 E-value=45 Score=27.98 Aligned_cols=22 Identities=14% Similarity=-0.180 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHH-ccccee---eccc
Q 037727 175 NDFRIAARNAIE-AEIKSS---KQLG 196 (205)
Q Consensus 175 ~~f~~AA~ra~~-AGfDgV---~ahG 196 (205)
++++++|+++++ +||+.| .+|+
T Consensus 144 e~~~~~a~~~~~~~Gf~~iKik~g~~ 169 (370)
T 1nu5_A 144 ARDIDSALEMIETRRHNRFKVKLGAR 169 (370)
T ss_dssp HHHHHHHHHHHHTTSCSEEEEECSSS
T ss_pred HHHHHHHHHHHHhCCccEEEEecCCC
Confidence 567789999999 999999 6664
No 195
>4e3e_A MAOC domain protein dehydratase; structural genomics, protein structure initiative, nysgrc, PSI-biology; 1.90A {Chloroflexus aurantiacus}
Probab=23.67 E-value=29 Score=29.35 Aligned_cols=41 Identities=10% Similarity=0.140 Sum_probs=31.0
Q ss_pred CCCCCCHHHHHHHHHHHHH------HHHHHHHcccceeeccchhhhh
Q 037727 161 PPRRLRTGEIPQIVNDFRI------AARNAIEAEIKSSKQLGYVLEI 201 (205)
Q Consensus 161 ~~~~mt~~eI~~ii~~f~~------AA~ra~~AGfDgV~ahGyLl~q 201 (205)
..+.+|.++|......+.+ -...|+++||.++-+||.|...
T Consensus 24 ~~~tvt~~~i~~FA~~sGD~nPiH~D~e~A~~~gf~~~iahG~l~~~ 70 (352)
T 4e3e_A 24 TPRTITEGDVALYTSLYGSRFALTSSTPFAQSLGLERAPIDSLLVFH 70 (352)
T ss_dssp CCEECCHHHHHHHHHHHCCCCHHHHCHHHHHHTTCSSCCCCHHHHHH
T ss_pred CCEEeCHHHHHHHHHHhCCCCccccCHHHHHhCCCCCCccCHHHHHH
Confidence 3688999999987776643 2456778999999788877543
No 196
>2c2i_A RV0130; hotdog, hydratase, lyase, structural proteomics in europe, spine, structural genomics; 1.8A {Mycobacterium tuberculosis} SCOP: d.38.1.4
Probab=23.57 E-value=43 Score=23.92 Aligned_cols=41 Identities=7% Similarity=0.070 Sum_probs=27.8
Q ss_pred CCCCCHHHHHHHHHHHH------HHHHHHHHcccceeeccchhhhhh
Q 037727 162 PRRLRTGEIPQIVNDFR------IAARNAIEAEIKSSKQLGYVLEIE 202 (205)
Q Consensus 162 ~~~mt~~eI~~ii~~f~------~AA~ra~~AGfDgV~ahGyLl~qF 202 (205)
.+.+|.++|......-. --...|+++||.+.-+||.|+..+
T Consensus 23 ~~~vt~~~i~~fa~~tgD~npiH~D~~~A~~~~~~~~IahG~l~~~~ 69 (151)
T 2c2i_A 23 WVTITQEEVNLFADATGDHQWIHVDPERAAAGPFGTTIAHGFMTLAL 69 (151)
T ss_dssp CEECCHHHHHHHHHHHSCCCHHHHCHHHHHTSTTSSCBCCHHHHHHT
T ss_pred CEEeCHHHHHHHHHHhCCCCccccCHHHHHhCCCCCceecHHHHHHH
Confidence 46789988776644211 114567889999998899876544
No 197
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3
Probab=23.53 E-value=75 Score=26.26 Aligned_cols=66 Identities=12% Similarity=0.187 Sum_probs=41.4
Q ss_pred cHHHHHHHHHHhcCC-CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCeeeEeccc
Q 037727 56 QPHAILYYSQRTTEG-GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLH 122 (205)
Q Consensus 56 t~~~~~~y~~rA~GG-GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~~QL~H 122 (205)
.+...+.++..++-| -.|=+-... +..-......++.++++.+..+.++++.++++|-++++-|.+
T Consensus 41 ~~~~~~dl~~~k~~G~N~vR~~~~~-~~~w~~~~~~~g~~~~~~~~~ld~~i~~a~~~Gi~vil~l~~ 107 (373)
T 1rh9_A 41 RIKVTNTFQQASKYKMNVARTWAFS-HGGSRPLQSAPGVYNEQMFQGLDFVISEAKKYGIHLIMSLVN 107 (373)
T ss_dssp THHHHHHHHHHHHTTCCEEEEESSC-SSSSSCSEEETTEECHHHHHHHHHHHHHHHHTTCEEEEECCB
T ss_pred HHHHHHHHHHHHHCCCCEEEECeec-CCCCccccCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEecc
Confidence 345555666666666 444332111 000001111245578889999999999999999999998875
No 198
>2k5e_A Uncharacterized protein; helix protein, structural genomic, structural genomics, PSI-2, protein structure initiative; NMR {Methanococcus jannaschii}
Probab=23.48 E-value=43 Score=21.61 Aligned_cols=23 Identities=9% Similarity=-0.073 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHHHccccee
Q 037727 170 IPQIVNDFRIAARNAIEAEIKSS 192 (205)
Q Consensus 170 I~~ii~~f~~AA~ra~~AGfDgV 192 (205)
|.+|++.|-+++....+.|+|-+
T Consensus 11 I~eiv~~~P~~~~vf~~~G~~c~ 33 (73)
T 2k5e_A 11 FAQALQTHPGVAGVLRSYNLGCI 33 (73)
T ss_dssp HHHHHHHCTHHHHHHHHTTGGGG
T ss_pred HHHHHHHCHHHHHHHHHcCCCCC
Confidence 88999999999999999999966
No 199
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=23.35 E-value=1.7e+02 Score=24.60 Aligned_cols=62 Identities=8% Similarity=0.013 Sum_probs=43.5
Q ss_pred HHHHhHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 037727 97 EQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVND 176 (205)
Q Consensus 97 ~~i~~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~ 176 (205)
..++.+++.++.+++-|++.++ .|.|+.+... + ...-..+.++.+++.
T Consensus 113 ~~i~~~~~~i~~A~~LGa~~vv--~~~G~~g~~~----------~--------------------~~~~~~~~~~~~~e~ 160 (393)
T 1xim_A 113 YAIRKVLRQMDLGAELGAKTLV--LWGGREGAEY----------D--------------------SAKDVSAALDRYREA 160 (393)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEE--EECTTSEESS----------G--------------------GGCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCEEE--ECCCCCCCcC----------C--------------------ccCCHHHHHHHHHHH
Confidence 4578999999999999998773 4555421100 0 001135678999999
Q ss_pred HHHHHHHHHHcccc
Q 037727 177 FRIAARNAIEAEIK 190 (205)
Q Consensus 177 f~~AA~ra~~AGfD 190 (205)
+.+.+..|++.||+
T Consensus 161 L~~l~~~A~~~g~g 174 (393)
T 1xim_A 161 LNLLAQYSEDRGYG 174 (393)
T ss_dssp HHHHHHHHHHHTCC
T ss_pred HHHHHHHHHhcCCC
Confidence 99999999999554
No 200
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=23.20 E-value=49 Score=26.51 Aligned_cols=21 Identities=10% Similarity=0.101 Sum_probs=16.6
Q ss_pred HHHHHHHHHHccccee-eccch
Q 037727 177 FRIAARNAIEAEIKSS-KQLGY 197 (205)
Q Consensus 177 f~~AA~ra~~AGfDgV-~ahGy 197 (205)
...|++.|.++|.|.| ..-||
T Consensus 150 i~~a~ria~eaGADfVKTsTG~ 171 (234)
T 1n7k_A 150 LSLLVDSSRRAGADIVKTSTGV 171 (234)
T ss_dssp HHHHHHHHHHTTCSEEESCCSS
T ss_pred HHHHHHHHHHhCCCEEEeCCCC
Confidence 3468999999999999 55444
No 201
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=23.17 E-value=65 Score=25.72 Aligned_cols=29 Identities=14% Similarity=0.074 Sum_probs=21.2
Q ss_pred CCCHHHHHH------HHHHHHHHHHHHHHccccee
Q 037727 164 RLRTGEIPQ------IVNDFRIAARNAIEAEIKSS 192 (205)
Q Consensus 164 ~mt~~eI~~------ii~~f~~AA~ra~~AGfDgV 192 (205)
.|+.+++++ +-+...+-|+.|+++|.|||
T Consensus 127 S~~~~~l~~~g~~~~~~~~v~~~A~~a~~~g~~Gv 161 (239)
T 3tr2_A 127 SLDGSDLKTLGIQEKVPDIVCRMATLAKSAGLDGV 161 (239)
T ss_dssp TCCHHHHHHTTCCSCHHHHHHHHHHHHHHHTCCEE
T ss_pred eCCHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence 466666543 24666777888999999999
No 202
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=23.16 E-value=2.6e+02 Score=21.64 Aligned_cols=63 Identities=13% Similarity=0.044 Sum_probs=46.0
Q ss_pred HHHHhHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 037727 97 EQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVND 176 (205)
Q Consensus 97 ~~i~~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~ 176 (205)
+.++.+++.++.+++-|++.++ .|.|.... .+ ..| -+++.++.+++.
T Consensus 101 ~~~~~~~~~i~~a~~lGa~~v~--~~~g~~~~-----------~~------------------~~p--~~~~~~~~~~~~ 147 (287)
T 3kws_A 101 ECMDTMKEIIAAAGELGSTGVI--IVPAFNGQ-----------VP------------------ALP--HTMETRDFLCEQ 147 (287)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEE--ECSCCTTC-----------CS------------------BCC--SSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCEEE--EecCcCCc-----------CC------------------CCC--CHHHHHHHHHHH
Confidence 4678999999999999998654 24442110 00 001 356789999999
Q ss_pred HHHHHHHHHHccccee
Q 037727 177 FRIAARNAIEAEIKSS 192 (205)
Q Consensus 177 f~~AA~ra~~AGfDgV 192 (205)
+.+.+..|++.|....
T Consensus 148 l~~l~~~a~~~Gv~l~ 163 (287)
T 3kws_A 148 FNEMGTFAAQHGTSVI 163 (287)
T ss_dssp HHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHcCCEEE
Confidence 9999999999998777
No 203
>3lub_A Putative creatinine amidohydrolase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Bacteroides fragilis}
Probab=23.03 E-value=2.3e+02 Score=22.62 Aligned_cols=87 Identities=10% Similarity=0.014 Sum_probs=54.8
Q ss_pred CceEeCCCCCCcc--C-CCCCcHHHHHHHHH-Hhc-------CCCeEEEecce--e-ccCCCCCCCCCccCCHHHHHhHH
Q 037727 38 HRIVLAPLSRMRS--Y-DYIPQPHAILYYSQ-RTT-------EGGFLISEASV--V-SETGRGYKHTPGIWTKEQVEAWK 103 (205)
Q Consensus 38 NRiv~aPm~~~~~--~-~g~~t~~~~~~y~~-rA~-------GGGlIi~~~~~--V-~~~g~~~~~~~~l~~d~~i~~l~ 103 (205)
+.++.-|++..-. + --.-||..+...-. ++. +.+.++.-... + ++....+|+.+.+..+..+.-|+
T Consensus 21 ~~~~ilPvGs~EqHGpHLPlgtD~~ia~~ia~~~a~~l~~~~~~~~lv~P~i~yG~~s~~h~~fPGTisl~~~tl~~~l~ 100 (254)
T 3lub_A 21 YDVIILPWGATEPHNLHLPYLTDCILPHDIAVEAAELALSRSGVRCMVMPPVPFGAHNPGQRELPFCIHTRYATQQAILE 100 (254)
T ss_dssp CCEEEEEECCCCCBTTTBBTTHHHHHHHHHHHHHHHHHHHHHCCCEEECCCBCCBCCCTTTTTSTTCCBCCHHHHHHHHH
T ss_pred CCEEEEEeecccccCCCccchHHHHHHHHHHHHHHHhhhhhcCCCEEEeCCccccCCCccccCcCCeEEeCHHHHHHHHH
Confidence 6688888764321 1 11235655443322 221 33555554444 3 44556788889999999999999
Q ss_pred HHHHHHHHcCCeeeEec-cccc
Q 037727 104 PIVAEVQAKGGIFFCQL-LHAG 124 (205)
Q Consensus 104 ~l~~~vH~~G~~i~~QL-~H~G 124 (205)
.+++.+.++|.+-++=+ .|.|
T Consensus 101 di~~sl~~~G~rrlvivNgHGG 122 (254)
T 3lub_A 101 DIVSSLHVQGFRKLLILSGHGG 122 (254)
T ss_dssp HHHHHHHHTTCCEEEEEESCTT
T ss_pred HHHHHHHHcCCCEEEEEeCCch
Confidence 99999999998755444 4444
No 204
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=23.01 E-value=69 Score=29.21 Aligned_cols=28 Identities=18% Similarity=0.227 Sum_probs=23.8
Q ss_pred HHhHHHHHHHHHHcCCeeeEe--ccccccc
Q 037727 99 VEAWKPIVAEVQAKGGIFFCQ--LLHAGRI 126 (205)
Q Consensus 99 i~~l~~l~~~vH~~G~~i~~Q--L~H~Gr~ 126 (205)
.+.|+++++++|+.|.++++- ++|.|..
T Consensus 202 ~~~~~~lv~~~H~~Gi~VilD~V~NH~~~~ 231 (618)
T 3m07_A 202 PDDFKAFIDAAHGYGLSVVLDIVLNHFGPE 231 (618)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSCCCSS
T ss_pred HHHHHHHHHHHHHCCCEEEEeecCccCCCC
Confidence 578999999999999999885 5777754
No 205
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Probab=22.93 E-value=84 Score=25.59 Aligned_cols=31 Identities=6% Similarity=-0.001 Sum_probs=28.0
Q ss_pred cCCHHHHHhHHHHHHHHHHcCCeeeEecccc
Q 037727 93 IWTKEQVEAWKPIVAEVQAKGGIFFCQLLHA 123 (205)
Q Consensus 93 l~~d~~i~~l~~l~~~vH~~G~~i~~QL~H~ 123 (205)
..++..+..++++++.++++|.++++-|.|.
T Consensus 62 ~~~~~~~~~l~~~v~~a~~~Gi~vildlh~~ 92 (343)
T 1ceo_A 62 EYKEDGLSYIDRCLEWCKKYNLGLVLDMHHA 92 (343)
T ss_dssp CBCHHHHHHHHHHHHHHHHTTCEEEEEEEEC
T ss_pred cccHHHHHHHHHHHHHHHHCCCEEEEEecCC
Confidence 3577889999999999999999999999885
No 206
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=22.93 E-value=73 Score=26.02 Aligned_cols=68 Identities=13% Similarity=0.190 Sum_probs=35.2
Q ss_pred eCCCCCCccCCCCCcHH-HHHHHHHHhcCC--CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCeeeE
Q 037727 42 LAPLSRMRSYDYIPQPH-AILYYSQRTTEG--GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFC 118 (205)
Q Consensus 42 ~aPm~~~~~~~g~~t~~-~~~~y~~rA~GG--GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~~ 118 (205)
.+|+.+-+..||.+... +.++.+.....| |+++.|.+ | ....+..++...-++.+++.+. | +++
T Consensus 4 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~Gtt-----G----E~~~Ls~eEr~~v~~~~~~~~~--g--via 70 (293)
T 1w3i_A 4 ITPIITPFTKDNRIDKEKLKIHAENLIRKGIDKLFVNGTT-----G----LGPSLSPEEKLENLKAVYDVTN--K--IIF 70 (293)
T ss_dssp EEECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTT-----T----TGGGSCHHHHHHHHHHHHTTCS--C--EEE
T ss_pred EEEeeCCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccc-----c----ChhhCCHHHHHHHHHHHHHHcC--C--EEE
Confidence 45555555556665543 334444444555 77777653 2 2234555665555555555432 3 555
Q ss_pred eccc
Q 037727 119 QLLH 122 (205)
Q Consensus 119 QL~H 122 (205)
....
T Consensus 71 Gvg~ 74 (293)
T 1w3i_A 71 QVGG 74 (293)
T ss_dssp ECCC
T ss_pred ecCC
Confidence 5543
No 207
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=22.92 E-value=2.7e+02 Score=21.61 Aligned_cols=71 Identities=8% Similarity=0.063 Sum_probs=46.1
Q ss_pred HHHHhHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCC-CHHHHHHHHH
Q 037727 97 EQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRL-RTGEIPQIVN 175 (205)
Q Consensus 97 ~~i~~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~m-t~~eI~~ii~ 175 (205)
+.++.+++.++.+++.|++.++ .|.+.... .|.. . . +. ...... +++.++.+++
T Consensus 87 ~~~~~~~~~i~~a~~lG~~~v~--~~~~~~~~-----~G~~--~-~--~~-------------~~~~~~~~~~~~~~~~~ 141 (301)
T 3cny_A 87 KASEAFEKHCQYLKAINAPVAV--VSEQTYTI-----QRSD--T-A--NI-------------FKDKPYFTDKEWDEVCK 141 (301)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEE--EEECTTCC-----TTCS--S-C--CT-------------TTCCCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCEEE--ecCCCccc-----cCcc--c-C--Cc-------------ccccccCcHHHHHHHHH
Confidence 4678899999999999998654 23221000 0100 0 0 00 000124 6788999999
Q ss_pred HHHHHHHHHHHccccee
Q 037727 176 DFRIAARNAIEAEIKSS 192 (205)
Q Consensus 176 ~f~~AA~ra~~AGfDgV 192 (205)
.+.+.+..|++.|....
T Consensus 142 ~l~~l~~~a~~~gv~l~ 158 (301)
T 3cny_A 142 GLNHYGEIAAKYGLKVA 158 (301)
T ss_dssp HHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHcCCEEE
Confidence 99999999999998766
No 208
>2dgd_A 223AA long hypothetical arylmalonate decarboxylas; octamer, alpha/beta structure, lyase; 2.90A {Sulfolobus tokodaii}
Probab=22.92 E-value=39 Score=26.14 Aligned_cols=30 Identities=3% Similarity=0.020 Sum_probs=24.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHccccee--ecc
Q 037727 165 LRTGEIPQIVNDFRIAARNAIEAEIKSS--KQL 195 (205)
Q Consensus 165 mt~~eI~~ii~~f~~AA~ra~~AGfDgV--~ah 195 (205)
.+.+++.++.+...++|++..++ +|+| +|+
T Consensus 44 ~~~~~~~~~~~~l~~~a~~L~~~-~d~ivi~Cn 75 (223)
T 2dgd_A 44 CEPENVEEFEKELKYSYSLLAEV-SDIIIYGRT 75 (223)
T ss_dssp SSCSCHHHHHHHHHHHHHHHTTT-CSEEEECCC
T ss_pred CCHHHHHHHHHHHHHHHHHhhcc-CCEEEEcCC
Confidence 44566888899999999999999 9999 553
No 209
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=22.79 E-value=52 Score=28.64 Aligned_cols=28 Identities=18% Similarity=0.347 Sum_probs=24.0
Q ss_pred HHhHHHHHHHHHHcCCeeeEec--cccccc
Q 037727 99 VEAWKPIVAEVQAKGGIFFCQL--LHAGRI 126 (205)
Q Consensus 99 i~~l~~l~~~vH~~G~~i~~QL--~H~Gr~ 126 (205)
.+.+++|++++|+.|.++++-+ +|.+..
T Consensus 97 ~~df~~lv~~~H~~Gi~VilD~V~NH~~~~ 126 (484)
T 2aaa_A 97 ADNLKSLSDALHARGMYLMVDVVPDHMGYA 126 (484)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECCSBCCBS
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcCCcCCC
Confidence 5789999999999999999864 787764
No 210
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A*
Probab=22.76 E-value=81 Score=25.31 Aligned_cols=31 Identities=6% Similarity=0.056 Sum_probs=27.7
Q ss_pred CCHHHHHhHHHHHHHHHHcCCeeeEeccccc
Q 037727 94 WTKEQVEAWKPIVAEVQAKGGIFFCQLLHAG 124 (205)
Q Consensus 94 ~~d~~i~~l~~l~~~vH~~G~~i~~QL~H~G 124 (205)
.++..+..+.++++.+.++|.++++-|.|.+
T Consensus 68 ~~~~~~~~~d~~v~~a~~~Gi~vild~h~~~ 98 (317)
T 3aof_A 68 IMDRFFKRVDEVINGALKRGLAVVINIHHYE 98 (317)
T ss_dssp BCHHHHHHHHHHHHHHHHTTCEEEEECCCCH
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEEecCCc
Confidence 4677899999999999999999999998864
No 211
>2bi0_A Hypothetical protein RV0216; conserved hypothetical, hotdog-fold, structural proteomics in europe, spine, structural genomics; 1.9A {Mycobacterium tuberculosis} SCOP: d.38.1.4 d.38.1.4
Probab=22.52 E-value=45 Score=28.04 Aligned_cols=41 Identities=5% Similarity=-0.144 Sum_probs=28.7
Q ss_pred CCCCCHHHHHHHHHHHH------HHHHHHHH-cccceeeccchhhhhh
Q 037727 162 PRRLRTGEIPQIVNDFR------IAARNAIE-AEIKSSKQLGYVLEIE 202 (205)
Q Consensus 162 ~~~mt~~eI~~ii~~f~------~AA~ra~~-AGfDgV~ahGyLl~qF 202 (205)
.+.+|.++|........ --...|++ +||.++-+||+|...+
T Consensus 29 ~~tvt~~~i~~FA~~tgD~npiH~D~e~A~~~~gf~~~IahG~lt~~l 76 (337)
T 2bi0_A 29 GVTLSLGLAAAHQSIVGNRLRLALDSDLCAAVTGMPGPLAHPGLVCDV 76 (337)
T ss_dssp CEECCHHHHHHHHHHHCCCCHHHHCHHHHHHHHCCSSCBCCHHHHHHH
T ss_pred CEEECHHHHHHHHHHhCCCCccccCHHHHhhhCCCCCceECHHHHHHH
Confidence 57899999887533211 11456778 9999998899876544
No 212
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=22.43 E-value=40 Score=28.21 Aligned_cols=32 Identities=16% Similarity=0.018 Sum_probs=23.9
Q ss_pred CCHHHHHHHHHHH------------HHHHHHHHHccccee--eccc
Q 037727 165 LRTGEIPQIVNDF------------RIAARNAIEAEIKSS--KQLG 196 (205)
Q Consensus 165 mt~~eI~~ii~~f------------~~AA~ra~~AGfDgV--~ahG 196 (205)
...+.|+++.+.+ .+.|++|.++|+|+| +.||
T Consensus 135 ~~~~~i~~lr~~~~~~~vi~G~v~s~e~A~~a~~aGad~Ivvs~hg 180 (336)
T 1ypf_A 135 AVINMIQHIKKHLPESFVIAGNVGTPEAVRELENAGADATKVGIGP 180 (336)
T ss_dssp HHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSC
T ss_pred HHHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEecCC
Confidence 3456677776664 378999999999999 5564
No 213
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=22.42 E-value=41 Score=28.75 Aligned_cols=23 Identities=13% Similarity=0.114 Sum_probs=18.9
Q ss_pred CCCcceeCCeecCCceEeCCCCC
Q 037727 25 LLTPYKMGSFNLSHRIVLAPLSR 47 (205)
Q Consensus 25 Lf~Pi~ig~~~lkNRiv~aPm~~ 47 (205)
+=..++|++.+|++.|+.+||+.
T Consensus 47 vd~st~~~g~~l~~Pv~ia~MtG 69 (368)
T 3vkj_A 47 INTKTKFFRKEISVPVMVTGMTG 69 (368)
T ss_dssp CBCCEEETTEEESSSEEECCCCC
T ss_pred ccceeEECCEeccCCeEEecCCC
Confidence 33456788999999999999974
No 214
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=22.42 E-value=1.4e+02 Score=24.63 Aligned_cols=70 Identities=10% Similarity=0.051 Sum_probs=34.2
Q ss_pred CCCCCCccCCCCCcH-HHHHHHHHHhcCC--CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCeeeEe
Q 037727 43 APLSRMRSYDYIPQP-HAILYYSQRTTEG--GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQ 119 (205)
Q Consensus 43 aPm~~~~~~~g~~t~-~~~~~y~~rA~GG--GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~~Q 119 (205)
+|+.+-+..||.+.. .+..+.+...+.| |+++.|.+ | ....+..+|...-++.+++++. ....+++.
T Consensus 13 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtT-----G----E~~~Ls~~Er~~v~~~~~~~~~-grvpViaG 82 (311)
T 3h5d_A 13 TAFITPFHEDGSINFDAIPALIEHLLAHHTDGILLAGTT-----A----ESPTLTHDEELELFAAVQKVVN-GRVPLIAG 82 (311)
T ss_dssp EECCCCBCTTSSBCTTHHHHHHHHHHHTTCCCEEESSTT-----T----TGGGSCHHHHHHHHHHHHHHSC-SSSCEEEE
T ss_pred EeeecCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccc-----c----ChhhCCHHHHHHHHHHHHHHhC-CCCcEEEe
Confidence 455444444454432 2333333333445 88887664 2 2234555665555555555542 23456665
Q ss_pred ccc
Q 037727 120 LLH 122 (205)
Q Consensus 120 L~H 122 (205)
..+
T Consensus 83 vg~ 85 (311)
T 3h5d_A 83 VGT 85 (311)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 215
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=22.28 E-value=1.6e+02 Score=24.58 Aligned_cols=63 Identities=8% Similarity=-0.041 Sum_probs=43.2
Q ss_pred HHHHhHHHHHHHHHHcCCeeeEecccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 037727 97 EQVEAWKPIVAEVQAKGGIFFCQLLHAGRISNRDFQPNGKAPISYSDKPLKNQPNGGFNAAEFTPPRRLRTGEIPQIVND 176 (205)
Q Consensus 97 ~~i~~l~~l~~~vH~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~pS~~~~~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~ 176 (205)
..++.+++.++.+++-|++.++ .|.|+.+... +. ..-..+.++.+++.
T Consensus 113 ~~i~~~~~~i~~A~~LGa~~vv--~~~G~~g~~~----------~~--------------------~~~~~~~~~~~~e~ 160 (387)
T 1bxb_A 113 YALRKSLETMDLGAELGAEIYV--VWPGREGAEV----------EA--------------------TGKARKVWDWVREA 160 (387)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEE--ECCTTCEESC----------GG--------------------GCGGGTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCEEE--ECCCCCCccC----------Cc--------------------cCCHHHHHHHHHHH
Confidence 4578899999999999998763 3555421100 00 00124568899999
Q ss_pred HHHHHHHHHHcccce
Q 037727 177 FRIAARNAIEAEIKS 191 (205)
Q Consensus 177 f~~AA~ra~~AGfDg 191 (205)
+.+.+..|++.||+.
T Consensus 161 L~~l~~~a~~~g~gv 175 (387)
T 1bxb_A 161 LNFMAAYAEDQGYGY 175 (387)
T ss_dssp HHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHhCCCc
Confidence 999999999996543
No 216
>2aam_A Hypothetical protein TM1410; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE UNL; 2.20A {Thermotoga maritima} SCOP: c.1.8.15
Probab=22.28 E-value=58 Score=27.15 Aligned_cols=26 Identities=19% Similarity=0.243 Sum_probs=20.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHccccee
Q 037727 164 RLRTGEIPQIVNDFRIAARNAIEAEIKSS 192 (205)
Q Consensus 164 ~mt~~eI~~ii~~f~~AA~ra~~AGfDgV 192 (205)
.++..+.+.++..++ .+|++.|||||
T Consensus 114 Di~~~~w~~i~~~rl---~~~~~kG~DGv 139 (309)
T 2aam_A 114 KYWYNEWKEIVFSYL---DRVIDQGFKGI 139 (309)
T ss_dssp CTTSHHHHHHHHHHH---HHHHHTTCSEE
T ss_pred ecCCHHHHHHHHHHH---HHHHHcCCCeE
Confidence 355677888888775 47778999999
No 217
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A*
Probab=22.17 E-value=89 Score=27.16 Aligned_cols=31 Identities=10% Similarity=0.211 Sum_probs=28.3
Q ss_pred ccCCHHHHHhHHHHHHHHHHcCCeeeEeccc
Q 037727 92 GIWTKEQVEAWKPIVAEVQAKGGIFFCQLLH 122 (205)
Q Consensus 92 ~l~~d~~i~~l~~l~~~vH~~G~~i~~QL~H 122 (205)
+.++.+.++.++++++.++++|.++++-|.|
T Consensus 97 g~~~~~~l~~l~~~v~~a~~~Gi~vildlH~ 127 (481)
T 2osx_A 97 GVYDQQYLDRVEDRVGWYAERGYKVMLDMHQ 127 (481)
T ss_dssp TBCCHHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCcCHHHHHHHHHHHHHHHHCCCEEEEEccc
Confidence 4578899999999999999999999999987
No 218
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3
Probab=21.99 E-value=82 Score=26.32 Aligned_cols=31 Identities=6% Similarity=-0.081 Sum_probs=28.3
Q ss_pred CCHHHHHhHHHHHHHHHHcCCeeeEeccccc
Q 037727 94 WTKEQVEAWKPIVAEVQAKGGIFFCQLLHAG 124 (205)
Q Consensus 94 ~~d~~i~~l~~l~~~vH~~G~~i~~QL~H~G 124 (205)
.+++.++.++++++.+.++|.++++-|+|.+
T Consensus 95 ~~~~~l~~l~~~v~~a~~~Gi~vild~H~~~ 125 (380)
T 1edg_A 95 ISDVWMNRVQEVVNYCIDNKMYVILNTHHDV 125 (380)
T ss_dssp ECHHHHHHHHHHHHHHHTTTCEEEEECCSCB
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEeCCCch
Confidence 5678899999999999999999999999975
No 219
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=21.98 E-value=57 Score=29.98 Aligned_cols=29 Identities=10% Similarity=0.173 Sum_probs=24.8
Q ss_pred HHhHHHHHHHHHHcCCeeeEec--ccccccc
Q 037727 99 VEAWKPIVAEVQAKGGIFFCQL--LHAGRIS 127 (205)
Q Consensus 99 i~~l~~l~~~vH~~G~~i~~QL--~H~Gr~~ 127 (205)
.+.|++|++++|+.|.++++-+ +|.+...
T Consensus 116 ~~dfk~Lv~~aH~~GikVilD~V~NHts~~~ 146 (683)
T 3bmv_A 116 FTDFQNLINTAHAHNIKVIIDFAPNHTSPAS 146 (683)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEccccccccc
Confidence 7799999999999999999864 7877654
No 220
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=21.98 E-value=51 Score=25.85 Aligned_cols=16 Identities=25% Similarity=0.138 Sum_probs=14.2
Q ss_pred HHHHHHHHHHccccee
Q 037727 177 FRIAARNAIEAEIKSS 192 (205)
Q Consensus 177 f~~AA~ra~~AGfDgV 192 (205)
..++|+.|.++|.|+|
T Consensus 134 ~~~~a~~a~eaGad~I 149 (225)
T 1mzh_A 134 IKKAVEICIEAGADFI 149 (225)
T ss_dssp HHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHhCCCEE
Confidence 5678889999999999
No 221
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=21.89 E-value=64 Score=27.06 Aligned_cols=29 Identities=24% Similarity=0.324 Sum_probs=25.7
Q ss_pred HHHhHHHHHHHHHHcCCeeeEeccccccc
Q 037727 98 QVEAWKPIVAEVQAKGGIFFCQLLHAGRI 126 (205)
Q Consensus 98 ~i~~l~~l~~~vH~~G~~i~~QL~H~Gr~ 126 (205)
.++..+++++.+++.|+-+++=|.|.|..
T Consensus 186 ~~e~~~~~v~~lr~~g~D~II~l~H~G~~ 214 (339)
T 3jyf_A 186 ITETARKYIPEMRAKGADVVVVVAHSGLS 214 (339)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEECCCCC
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEeccCcc
Confidence 36789999999999999999999999963
No 222
>2j78_A Beta-glucosidase A; family 1, hydrolase, inhibitor, glycosidase, polysaccharide degradation, transition state mimic, carbohydrate metabolism; HET: GOX; 1.65A {Thermotoga maritima} SCOP: c.1.8.4 PDB: 1oif_A* 1oim_A* 1oin_A* 1od0_A* 1w3j_A* 1uz1_A* 2cbv_A* 2ces_A* 2cet_A* 2j75_A* 2j77_A* 2cbu_A* 2j79_A* 2j7b_A* 2j7c_A* 2j7d_A* 2j7e_A* 2j7f_A* 2j7g_A* 2j7h_A* ...
Probab=21.88 E-value=79 Score=27.95 Aligned_cols=34 Identities=18% Similarity=0.275 Sum_probs=30.1
Q ss_pred ccCCHHHHHhHHHHHHHHHHcCCeeeEecccccc
Q 037727 92 GIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGR 125 (205)
Q Consensus 92 ~l~~d~~i~~l~~l~~~vH~~G~~i~~QL~H~Gr 125 (205)
+-.+.+-+..+.++++.++++|..+++=|.|.+.
T Consensus 113 g~~n~~gl~~yd~lid~l~~~GI~pivtL~H~d~ 146 (468)
T 2j78_A 113 GRVNQKGLDFYNRIIDTLLEKGITPFVTIYHWDL 146 (468)
T ss_dssp SCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCC
T ss_pred CCcCHHHHHHHHHHHHHHHhcCCEEEEEccCCCC
Confidence 3468889999999999999999999999999643
No 223
>3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A*
Probab=21.85 E-value=92 Score=27.27 Aligned_cols=35 Identities=11% Similarity=0.215 Sum_probs=29.7
Q ss_pred CccCCHHHHHhHHHHHHHHHHcCCeeeEecccccc
Q 037727 91 PGIWTKEQVEAWKPIVAEVQAKGGIFFCQLLHAGR 125 (205)
Q Consensus 91 ~~l~~d~~i~~l~~l~~~vH~~G~~i~~QL~H~Gr 125 (205)
+.+.+...++.+.++++.++++|.++++-++|.+.
T Consensus 125 p~~~~~~~l~~ld~vV~~a~~~Gi~VIldlH~~~~ 159 (458)
T 3qho_A 125 PDLRGLDSLQIMEKIIKKAGDLGIFVLLDYHRIGC 159 (458)
T ss_dssp GGGTTCCHHHHHHHHHHHHHHTTCEEEEEEEESSS
T ss_pred ccccchHHHHHHHHHHHHHHHCCCEEEEecccCCC
Confidence 44455578999999999999999999999998753
No 224
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=21.82 E-value=64 Score=27.69 Aligned_cols=27 Identities=11% Similarity=0.233 Sum_probs=23.4
Q ss_pred HHhHHHHHHHHHHcCCeeeEec--ccccc
Q 037727 99 VEAWKPIVAEVQAKGGIFFCQL--LHAGR 125 (205)
Q Consensus 99 i~~l~~l~~~vH~~G~~i~~QL--~H~Gr 125 (205)
.+.|++|++++|+.|.++++-+ +|.+.
T Consensus 83 ~~~~~~lv~~~h~~Gi~vi~D~V~NH~~~ 111 (449)
T 3dhu_A 83 LADFKALTDRAHELGMKVMLDIVYNHTSP 111 (449)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEECT
T ss_pred HHHHHHHHHHHHHCCCEEEEEEccCcCcC
Confidence 5789999999999999999864 68775
No 225
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=21.77 E-value=58 Score=29.95 Aligned_cols=29 Identities=17% Similarity=0.221 Sum_probs=24.8
Q ss_pred HHhHHHHHHHHHHcCCeeeEe--cccccccc
Q 037727 99 VEAWKPIVAEVQAKGGIFFCQ--LLHAGRIS 127 (205)
Q Consensus 99 i~~l~~l~~~vH~~G~~i~~Q--L~H~Gr~~ 127 (205)
.+.|++|++++|+.|.++++- ++|.+...
T Consensus 115 ~~dfk~Lv~~aH~~GI~VilD~V~NHts~~~ 145 (686)
T 1d3c_A 115 IADFQNLIAAAHAKNIKVIIDFAPNHTSPAS 145 (686)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCcCcccccc
Confidence 789999999999999999986 48877643
No 226
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=21.65 E-value=59 Score=29.22 Aligned_cols=28 Identities=21% Similarity=0.248 Sum_probs=24.0
Q ss_pred HHhHHHHHHHHHHcCCeeeEec--cccccc
Q 037727 99 VEAWKPIVAEVQAKGGIFFCQL--LHAGRI 126 (205)
Q Consensus 99 i~~l~~l~~~vH~~G~~i~~QL--~H~Gr~ 126 (205)
.+.|++|++++|+.|.++++-+ +|.+..
T Consensus 222 ~~df~~lv~~~H~~Gi~VilD~V~NH~~~~ 251 (588)
T 1j0h_A 222 KETLKTLIDRCHEKGIRVMLDAVFNHCGYE 251 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCTT
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcCcCccc
Confidence 5789999999999999999865 787753
No 227
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=21.55 E-value=59 Score=29.57 Aligned_cols=27 Identities=11% Similarity=0.018 Sum_probs=23.2
Q ss_pred HHhHHHHHHHHHHcCCeeeEec--ccccc
Q 037727 99 VEAWKPIVAEVQAKGGIFFCQL--LHAGR 125 (205)
Q Consensus 99 i~~l~~l~~~vH~~G~~i~~QL--~H~Gr 125 (205)
.+.|++|++++|+.|.++++=+ +|+|.
T Consensus 285 ~~df~~LV~~aH~~GI~VIlD~V~NHts~ 313 (645)
T 4aef_A 285 DRAFVDLLSELKRFDIKVILDGVFHHTSF 313 (645)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCT
T ss_pred HHHHHHHHHHhhhcCCEEEEEeccccccc
Confidence 5689999999999999999865 78764
No 228
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=21.39 E-value=61 Score=29.03 Aligned_cols=28 Identities=18% Similarity=0.341 Sum_probs=23.9
Q ss_pred HHhHHHHHHHHHHcCCeeeEec--cccccc
Q 037727 99 VEAWKPIVAEVQAKGGIFFCQL--LHAGRI 126 (205)
Q Consensus 99 i~~l~~l~~~vH~~G~~i~~QL--~H~Gr~ 126 (205)
.+.|++|++++|+.|.+|++-+ +|.+..
T Consensus 92 ~~df~~lv~~aH~~Gi~VilD~V~NH~s~~ 121 (570)
T 1m53_A 92 MEDFDSLVAEMKKRNMRLMIDVVINHTSDQ 121 (570)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCTT
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeccccccc
Confidence 6789999999999999999865 777653
No 229
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=21.37 E-value=61 Score=28.89 Aligned_cols=28 Identities=18% Similarity=0.399 Sum_probs=23.8
Q ss_pred HHhHHHHHHHHHHcCCeeeEec--cccccc
Q 037727 99 VEAWKPIVAEVQAKGGIFFCQL--LHAGRI 126 (205)
Q Consensus 99 i~~l~~l~~~vH~~G~~i~~QL--~H~Gr~ 126 (205)
.+.|++|++++|+.|.++++-+ +|.+..
T Consensus 79 ~~df~~Lv~~aH~~Gi~VilD~V~NHts~~ 108 (557)
T 1zja_A 79 MEDFDRLMAELKKRGMRLMVDVVINHSSDQ 108 (557)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCTT
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeccccccc
Confidence 6789999999999999999765 787753
No 230
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=21.28 E-value=73 Score=25.99 Aligned_cols=24 Identities=25% Similarity=0.360 Sum_probs=19.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHccccee
Q 037727 165 LRTGEIPQIVNDFRIAARNAIEAEIKSS 192 (205)
Q Consensus 165 mt~~eI~~ii~~f~~AA~ra~~AGfDgV 192 (205)
-|.+|++.+.++ .+.++++|+|||
T Consensus 67 Ys~~E~~~M~~D----i~~~~~~GadGv 90 (256)
T 1twd_A 67 YSDGEFAAILED----VRTVRELGFPGL 90 (256)
T ss_dssp CCHHHHHHHHHH----HHHHHHTTCSEE
T ss_pred CCHHHHHHHHHH----HHHHHHcCCCEE
Confidence 478888887765 567889999999
No 231
>1dul_A Signal recognition particle protein (fifty-four homolog); protein-RNA complex, double helix, tetraloop, internal loop, SRP, ribonucleoprotein; HET: CCC; 1.80A {Escherichia coli} SCOP: a.36.1.1 PDB: 2xkv_C
Probab=21.17 E-value=1.1e+02 Score=19.76 Aligned_cols=22 Identities=9% Similarity=0.288 Sum_probs=19.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHH
Q 037727 165 LRTGEIPQIVNDFRIAARNAIE 186 (205)
Q Consensus 165 mt~~eI~~ii~~f~~AA~ra~~ 186 (205)
.+.+|+.+++.+|.+.++..++
T Consensus 47 ~~v~eVn~Llkqf~~m~kmmk~ 68 (69)
T 1dul_A 47 MQVQDVNRLLKQFDDMQRMMKK 68 (69)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHhc
Confidence 4789999999999999988764
No 232
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=21.02 E-value=55 Score=27.96 Aligned_cols=22 Identities=9% Similarity=-0.250 Sum_probs=17.8
Q ss_pred HHHHHHHHHHccccee---eccchh
Q 037727 177 FRIAARNAIEAEIKSS---KQLGYV 198 (205)
Q Consensus 177 f~~AA~ra~~AGfDgV---~ahGyL 198 (205)
..+.++++.+||+|.| .+||+.
T Consensus 101 ~~e~~~~a~~aGvdvI~id~a~G~~ 125 (361)
T 3r2g_A 101 ELQRAEALRDAGADFFCVDVAHAHA 125 (361)
T ss_dssp HHHHHHHHHHTTCCEEEEECSCCSS
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCc
Confidence 4566889999999998 678864
No 233
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=21.00 E-value=1.3e+02 Score=24.81 Aligned_cols=71 Identities=10% Similarity=-0.070 Sum_probs=40.0
Q ss_pred EeCCCCCCccC-CCCCcHHH-HHHHHHHhcCC--CeEEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCee
Q 037727 41 VLAPLSRMRSY-DYIPQPHA-ILYYSQRTTEG--GFLISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIF 116 (205)
Q Consensus 41 v~aPm~~~~~~-~g~~t~~~-~~~y~~rA~GG--GlIi~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i 116 (205)
+.+|+.+-+.. ||.+.... ..+.+...+.| |+++.|.+ | ....+..+|..+-++.+++++. ....+
T Consensus 15 v~~a~vTPf~~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtT-----G----E~~~Ls~eEr~~v~~~~v~~~~-grvpV 84 (316)
T 3e96_A 15 ISGIPITPFRKSDGSIDWHHYKETVDRIVDNGIDVIVPCGNT-----S----EFYALSLEEAKEEVRRTVEYVH-GRALV 84 (316)
T ss_dssp EEECCCCCBCTTTCCBCHHHHHHHHHHHHTTTCCEECTTSGG-----G----TGGGSCHHHHHHHHHHHHHHHT-TSSEE
T ss_pred eEEeeeCCccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccc-----c----CcccCCHHHHHHHHHHHHHHhC-CCCcE
Confidence 34566555655 77666543 33333344556 77766654 1 2234566677777777777664 23566
Q ss_pred eEecc
Q 037727 117 FCQLL 121 (205)
Q Consensus 117 ~~QL~ 121 (205)
++...
T Consensus 85 iaGvg 89 (316)
T 3e96_A 85 VAGIG 89 (316)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 66654
No 234
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=20.70 E-value=62 Score=29.97 Aligned_cols=27 Identities=15% Similarity=0.373 Sum_probs=23.6
Q ss_pred HHhHHHHHHHHHHcCCeeeEec--ccccc
Q 037727 99 VEAWKPIVAEVQAKGGIFFCQL--LHAGR 125 (205)
Q Consensus 99 i~~l~~l~~~vH~~G~~i~~QL--~H~Gr 125 (205)
++.||++++++|+.|.++++-+ +|.+.
T Consensus 254 ~~efk~lV~~~H~~Gi~VilDvV~NH~~~ 282 (714)
T 2ya0_A 254 IAEFKNLINEIHKRGMGAILDVVYNHTAK 282 (714)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTBCSC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccCcccC
Confidence 7899999999999999998764 77765
No 235
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=20.70 E-value=63 Score=29.67 Aligned_cols=29 Identities=21% Similarity=0.252 Sum_probs=24.8
Q ss_pred HHhHHHHHHHHHHcCCeeeEe--cccccccc
Q 037727 99 VEAWKPIVAEVQAKGGIFFCQ--LLHAGRIS 127 (205)
Q Consensus 99 i~~l~~l~~~vH~~G~~i~~Q--L~H~Gr~~ 127 (205)
.+.|++|++++|+.|.++++- ++|.+...
T Consensus 111 ~~df~~Lv~~aH~~GIkVilD~V~NHts~~~ 141 (680)
T 1cyg_A 111 LSDFQRLVDAAHAKGIKVIIDFAPNHTSPAS 141 (680)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCCCCccc
Confidence 789999999999999999986 48877643
No 236
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=20.50 E-value=65 Score=28.70 Aligned_cols=28 Identities=18% Similarity=0.423 Sum_probs=24.0
Q ss_pred HHhHHHHHHHHHHcCCeeeEec--cccccc
Q 037727 99 VEAWKPIVAEVQAKGGIFFCQL--LHAGRI 126 (205)
Q Consensus 99 i~~l~~l~~~vH~~G~~i~~QL--~H~Gr~ 126 (205)
.+.|++|++++|+.|.++++-+ +|.+..
T Consensus 78 ~~df~~lv~~~h~~Gi~VilD~V~NH~s~~ 107 (558)
T 1uok_A 78 MEDWDELLHEMHERNMKLMMDLVVNHTSDE 107 (558)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCTT
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeccccccc
Confidence 6789999999999999999865 787653
No 237
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=20.33 E-value=61 Score=29.12 Aligned_cols=28 Identities=21% Similarity=0.361 Sum_probs=23.8
Q ss_pred HHhHHHHHHHHHHcCCeeeEec--cccccc
Q 037727 99 VEAWKPIVAEVQAKGGIFFCQL--LHAGRI 126 (205)
Q Consensus 99 i~~l~~l~~~vH~~G~~i~~QL--~H~Gr~ 126 (205)
.+.|++|++++|+.|.++++-+ +|.+..
T Consensus 219 ~~dfk~lv~~~H~~Gi~VilD~V~NH~~~~ 248 (585)
T 1wzl_A 219 LPTFRRLVDEAHRRGIKIILDAVFNHAGDQ 248 (585)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECCSBCCTT
T ss_pred HHHHHHHHHHHHHCCCEEEEEEcCCcCCCc
Confidence 5789999999999999999864 777753
No 238
>1b8z_A Protein (histonelike protein HU); thermostable DNA binding protein; 1.60A {Thermotoga maritima} SCOP: a.55.1.1 PDB: 1riy_A
Probab=20.32 E-value=1.2e+02 Score=19.88 Aligned_cols=34 Identities=12% Similarity=0.153 Sum_probs=27.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHccccee-eccch
Q 037727 164 RLRTGEIPQIVNDFRIAARNAIEAEIKSS-KQLGY 197 (205)
Q Consensus 164 ~mt~~eI~~ii~~f~~AA~ra~~AGfDgV-~ahGy 197 (205)
.||..|+..+++.|.+.-..+...|-..- .+-|+
T Consensus 15 ~ls~~~~~~~l~~~~~~i~~~L~~g~~V~l~gfG~ 49 (90)
T 1b8z_A 15 GAKKKDVKLILDTILETITEALAKGEKVQIVGFGS 49 (90)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHTTCCEEETTTEE
T ss_pred CcCHHHHHHHHHHHHHHHHHHHhCCCEEEECCCEE
Confidence 47999999999999999999999995433 44443
No 239
>3lfj_A Manxb, phosphotransferase system, mannose/fructose/N- acetylgalactosamine-specific component...; manxb PTS; 1.56A {Thermoanaerobacter tengcongensis}
Probab=20.31 E-value=1.8e+02 Score=22.32 Aligned_cols=51 Identities=10% Similarity=0.158 Sum_probs=30.7
Q ss_pred hcCC-Ce--EEEecceeccCCCCCCCCCccCCHHHHHhHHHHHHHHHHcCCeeeEecc
Q 037727 67 TTEG-GF--LISEASVVSETGRGYKHTPGIWTKEQVEAWKPIVAEVQAKGGIFFCQLL 121 (205)
Q Consensus 67 A~GG-Gl--Ii~~~~~V~~~g~~~~~~~~l~~d~~i~~l~~l~~~vH~~G~~i~~QL~ 121 (205)
.++| .+ |.+|++.-.+..+....... -+++.++.|++|.+ .||..+.+|..
T Consensus 114 ve~Gv~i~~vNvG~m~~~~gk~~i~~~V~-v~~ed~~~lk~L~~---~~Gv~v~~q~v 167 (187)
T 3lfj_A 114 MDGGLPITTLNIGGVAKTPQRKGISQSVS-LSEDEVKTLLELKT---KYNVDVYLQMI 167 (187)
T ss_dssp HHTTCCCSEEEEEEBCCCTTSEECSSSBE-ECHHHHHHHHHHHH---HHCCEEEECSS
T ss_pred HHcCCCCCEEEECCCCCCCCCEEEeccEe-eCHHHHHHHHHHHh---ccCCEEEEEEC
Confidence 4454 33 55666544433222222222 36788999998864 35999999975
No 240
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=20.25 E-value=65 Score=29.61 Aligned_cols=29 Identities=10% Similarity=0.229 Sum_probs=24.6
Q ss_pred HHhHHHHHHHHHHcCCeeeEec--ccccccc
Q 037727 99 VEAWKPIVAEVQAKGGIFFCQL--LHAGRIS 127 (205)
Q Consensus 99 i~~l~~l~~~vH~~G~~i~~QL--~H~Gr~~ 127 (205)
.+.|++|++++|+.|.++++-+ +|.+...
T Consensus 107 ~~df~~Lv~~aH~~GikVilD~V~NHts~~~ 137 (686)
T 1qho_A 107 WTTFDTLVNDAHQNGIKVIVDFVPNHSTPFK 137 (686)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTEEEEEB
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccccccccc
Confidence 6799999999999999999864 7877643
No 241
>1owf_B IHF-beta, integration HOST factor beta-subunit; protein-DNA recognition, indirect readout, DNA bending, minor groove; 1.95A {Escherichia coli} SCOP: a.55.1.1 PDB: 1ouz_B 2ht0_B 1ihf_B 1owg_B
Probab=20.23 E-value=1.2e+02 Score=20.16 Aligned_cols=34 Identities=6% Similarity=0.170 Sum_probs=27.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHccccee-eccch
Q 037727 164 RLRTGEIPQIVNDFRIAARNAIEAEIKSS-KQLGY 197 (205)
Q Consensus 164 ~mt~~eI~~ii~~f~~AA~ra~~AGfDgV-~ahGy 197 (205)
.||..|++.+++.|.+.-..+...|-..- .+-|+
T Consensus 16 ~ls~~~~~~~l~~~~~~i~~~L~~g~~V~l~gfG~ 50 (94)
T 1owf_B 16 HIPAKTVEDAVKEMLEHMASTLAQGERIAIRGFGS 50 (94)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHTTCCEEETTTEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCCeEEEcCcEE
Confidence 58999999999999999999999986543 44443
No 242
>3dmi_A Cytochrome C6; electron transport, transit peptide; HET: HEM; 1.50A {Phaeodactylum tricornutum} SCOP: a.3.1.1
Probab=20.19 E-value=91 Score=19.49 Aligned_cols=18 Identities=22% Similarity=0.254 Sum_probs=13.9
Q ss_pred CCCCHHHHHHHHHHHHHH
Q 037727 163 RRLRTGEIPQIVNDFRIA 180 (205)
Q Consensus 163 ~~mt~~eI~~ii~~f~~A 180 (205)
..||.+||..|+.-+..-
T Consensus 65 ~~ls~~ei~~l~~yl~~~ 82 (88)
T 3dmi_A 65 GRLSDEEIANVAAYVLAS 82 (88)
T ss_dssp TTSCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHH
Confidence 369999999998766543
No 243
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=20.13 E-value=66 Score=29.16 Aligned_cols=27 Identities=7% Similarity=0.043 Sum_probs=23.2
Q ss_pred HHhHHHHHHHHHHcCCeeeEe--cccccc
Q 037727 99 VEAWKPIVAEVQAKGGIFFCQ--LLHAGR 125 (205)
Q Consensus 99 i~~l~~l~~~vH~~G~~i~~Q--L~H~Gr 125 (205)
.+.|++|++++|+.|.++++- ++|.++
T Consensus 208 ~~dfk~Lv~~aH~~GI~VilD~V~NH~~~ 236 (599)
T 3bc9_A 208 KGELENAIDALHNNDIKVYFDAVLNHRMG 236 (599)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEECS
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcCCCCC
Confidence 678999999999999999985 478754
No 244
>2o97_B NS1, HU-1, DNA-binding protein HU-beta; heterodimer, DNA structure, DNA supercoiling, E DNA binding protein; 2.45A {Escherichia coli} SCOP: a.55.1.1
Probab=20.12 E-value=1.1e+02 Score=20.06 Aligned_cols=34 Identities=3% Similarity=0.097 Sum_probs=26.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHccccee-eccch
Q 037727 164 RLRTGEIPQIVNDFRIAARNAIEAEIKSS-KQLGY 197 (205)
Q Consensus 164 ~mt~~eI~~ii~~f~~AA~ra~~AGfDgV-~ahGy 197 (205)
.||..|+..+++.|.+.-..+...|-..- .+-|+
T Consensus 15 ~ls~~~~~~~l~~~~~~i~~~L~~g~~V~l~gfG~ 49 (90)
T 2o97_B 15 DISKAAAGRALDAIIASVTESLKEGDDVALVGFGT 49 (90)
T ss_dssp C-CHHHHHHHHHHHHHHHHHHHHTTCCEEETTTEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCeEEECCCEE
Confidence 58999999999999999999999986544 44443
No 245
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=20.07 E-value=65 Score=29.84 Aligned_cols=30 Identities=10% Similarity=0.139 Sum_probs=25.5
Q ss_pred HHHhHHHHHHHHHHcCCeeeEec--ccccccc
Q 037727 98 QVEAWKPIVAEVQAKGGIFFCQL--LHAGRIS 127 (205)
Q Consensus 98 ~i~~l~~l~~~vH~~G~~i~~QL--~H~Gr~~ 127 (205)
.++.||+|++++|+.|.++++-+ +|.+...
T Consensus 314 ~~~dfk~LV~~aH~~GI~VIlDvV~NHt~~~~ 345 (718)
T 2e8y_A 314 RKTELKQMINTLHQHGLRVILDVVFNHVYKRE 345 (718)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECTTCCSSGG
T ss_pred cHHHHHHHHHHHHHCCCEEEEEEecccccCcc
Confidence 37899999999999999999865 7877654
No 246
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3
Probab=20.05 E-value=1.1e+02 Score=24.87 Aligned_cols=31 Identities=16% Similarity=0.048 Sum_probs=27.7
Q ss_pred cCCHHHHHhHHHHHHHHHHcCCeeeEecccc
Q 037727 93 IWTKEQVEAWKPIVAEVQAKGGIFFCQLLHA 123 (205)
Q Consensus 93 l~~d~~i~~l~~l~~~vH~~G~~i~~QL~H~ 123 (205)
..++..+..+.++++.+.++|.++++-|.|.
T Consensus 70 ~~~~~~~~~ld~~v~~a~~~Gi~vildlh~~ 100 (341)
T 1vjz_A 70 IIREDFFEKIDRVIFWGEKYGIHICISLHRA 100 (341)
T ss_dssp CCCGGGHHHHHHHHHHHHHHTCEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHHHcCCEEEEEecCC
Confidence 3567789999999999999999999999884
Done!