Query 037730
Match_columns 83
No_of_seqs 102 out of 115
Neff 4.2
Searched_HMMs 29240
Date Mon Mar 25 05:51:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037730.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037730hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2w0c_T Protein P6, protein VI; 17.9 57 0.0019 21.7 1.7 14 4-17 7-20 (127)
2 1fs0_G ATP synthase gamma subu 14.1 97 0.0033 21.6 2.2 19 22-40 66-86 (230)
3 4gac_A Alcohol dehydrogenase [ 13.8 69 0.0024 22.7 1.3 25 12-36 141-169 (324)
4 2l6m_A Protein dicer; DSRBD, h 13.5 55 0.0019 21.9 0.7 10 17-27 30-39 (121)
5 1f35_A Olfactory marker protei 13.5 36 0.0012 23.9 -0.3 9 73-81 132-140 (162)
6 1us0_A Aldose reductase; oxido 12.4 79 0.0027 22.5 1.3 26 12-37 140-169 (316)
7 1qwk_A Aldose reductase, aldo- 12.3 80 0.0027 22.6 1.3 27 12-38 133-163 (317)
8 1hw6_A 2,5-diketo-D-gluconic a 12.2 74 0.0025 22.4 1.1 26 12-37 119-148 (278)
9 1pyf_A IOLS protein; beta-alph 12.1 82 0.0028 22.3 1.3 17 12-28 135-151 (312)
10 3h7r_A Aldo-keto reductase; st 12.1 82 0.0028 22.9 1.3 17 11-27 153-169 (331)
No 1
>2w0c_T Protein P6, protein VI; virus, member of PRD1-adeno viral lineage, membrane-containing bacteriophage, virus virion, membrane; 7.00A {Pseudoalteromonas phage PM2}
Probab=17.95 E-value=57 Score=21.67 Aligned_cols=14 Identities=43% Similarity=0.752 Sum_probs=11.5
Q ss_pred chhHHHHHHHHHHH
Q 037730 4 KGKAWMVAASVGAV 17 (83)
Q Consensus 4 ~~~~w~vAaSvgaV 17 (83)
++-.|+.|+.||+-
T Consensus 7 knfvwilaagvgvw 20 (127)
T 2w0c_T 7 KNFVWILAAGVGVW 20 (127)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred hhhheeeecccEEE
Confidence 45689999999973
No 2
>1fs0_G ATP synthase gamma subunit; coiled coil, epsilon, hydrolase; 2.10A {Escherichia coli} SCOP: c.49.2.1
Probab=14.12 E-value=97 Score=21.56 Aligned_cols=19 Identities=21% Similarity=0.345 Sum_probs=12.5
Q ss_pred ccCcc-cchhh-HHHHHHHHH
Q 037730 22 DQGFV-RRNYS-LRFLKQRAE 40 (83)
Q Consensus 22 DQG~C-Rwn~a-lrSl~~~ak 40 (83)
|+|+| ..|.. +|.+.+..+
T Consensus 66 DrGLcG~~Nsni~k~~~~~i~ 86 (230)
T 1fs0_G 66 DRGLCGGLNINLFKKLLAEMK 86 (230)
T ss_dssp SSSCSTTHHHHHHHHHHHHHH
T ss_pred CccccccccHHHHHHHHHHHH
Confidence 89999 67754 566554443
No 3
>4gac_A Alcohol dehydrogenase [NADP(+)]; TIM barrel, aldheyde reductase AKR1A4, SMAR1, oxidoreductase; HET: FLC; 1.64A {Mus musculus} PDB: 2alr_A 3h4g_A* 3cv7_A* 3fx4_A* 1ae4_A* 1cwn_A* 1hqt_A*
Probab=13.78 E-value=69 Score=22.66 Aligned_cols=25 Identities=28% Similarity=0.486 Sum_probs=17.4
Q ss_pred HHHHHHHhhcccCcccc----hhhHHHHH
Q 037730 12 ASVGAVEALKDQGFVRR----NYSLRFLK 36 (83)
Q Consensus 12 aSvgaVEalKDQG~CRw----n~alrSl~ 36 (83)
-.+.++|.|+++|+.|. |+....+.
T Consensus 141 e~~~al~~l~~~Gkir~iGvSn~~~~~l~ 169 (324)
T 4gac_A 141 ETWKALEVLVAKGLVKALGLSNFNSRQID 169 (324)
T ss_dssp HHHHHHHHHHHTTSBSCEEEESCCHHHHH
T ss_pred HHHHHHHHHHHCCCeeEecCCCCCHHHHH
Confidence 46788999999998873 44444443
No 4
>2l6m_A Protein dicer; DSRBD, hydrolase; NMR {Schizosaccharomyces pombe}
Probab=13.55 E-value=55 Score=21.91 Aligned_cols=10 Identities=50% Similarity=0.700 Sum_probs=7.0
Q ss_pred HHhhcccCccc
Q 037730 17 VEALKDQGFVR 27 (83)
Q Consensus 17 VEalKDQG~CR 27 (83)
-+-||||| |.
T Consensus 30 ~Q~Lq~QG-C~ 39 (121)
T 2l6m_A 30 YQLLKDQG-CE 39 (121)
T ss_dssp HHHHTTTT-CC
T ss_pred HHHHHHhc-HH
Confidence 45688888 64
No 5
>1f35_A Olfactory marker protein; beta, structural genomics, PSI, protein structure initiative northeast structural genomics consortium, NESG, signaling P; 2.30A {Mus musculus} SCOP: b.94.1.1 PDB: 1job_A 1jod_A 1jyt_A 1zri_A
Probab=13.52 E-value=36 Score=23.88 Aligned_cols=9 Identities=56% Similarity=0.870 Sum_probs=7.1
Q ss_pred hhhhhhhcc
Q 037730 73 ESLRKVMYS 81 (83)
Q Consensus 73 EsLRtVMyL 81 (83)
...|+|||+
T Consensus 132 AkiRKVMYF 140 (162)
T 1f35_A 132 AKIRKVMYF 140 (162)
T ss_dssp HHHCSEEEE
T ss_pred HHHHhheeE
Confidence 357999996
No 6
>1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT; 0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A* 1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A* 2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A* 2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ...
Probab=12.45 E-value=79 Score=22.54 Aligned_cols=26 Identities=27% Similarity=0.445 Sum_probs=18.2
Q ss_pred HHHHHHHhhcccCcccc----hhhHHHHHH
Q 037730 12 ASVGAVEALKDQGFVRR----NYSLRFLKQ 37 (83)
Q Consensus 12 aSvgaVEalKDQG~CRw----n~alrSl~~ 37 (83)
-...++|.|+++|++|. |+....+.+
T Consensus 140 e~~~ale~l~~~Gkir~iGvSn~~~~~l~~ 169 (316)
T 1us0_A 140 DTWAAMEELVDEGLVKAIGISNFNHLQVEM 169 (316)
T ss_dssp HHHHHHHHHHHTTSBSCEEEESCCHHHHHH
T ss_pred HHHHHHHHHHHCCCccEEEEecCCHHHHHH
Confidence 46778999999998875 555444443
No 7
>1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961; structural genomics, PSI, protein structure initiative; 1.60A {Caenorhabditis elegans} SCOP: c.1.7.1
Probab=12.33 E-value=80 Score=22.57 Aligned_cols=27 Identities=11% Similarity=0.219 Sum_probs=18.5
Q ss_pred HHHHHHHhhcccCcccc----hhhHHHHHHH
Q 037730 12 ASVGAVEALKDQGFVRR----NYSLRFLKQR 38 (83)
Q Consensus 12 aSvgaVEalKDQG~CRw----n~alrSl~~~ 38 (83)
-.+.++|.|+++|++|. |+....+.+-
T Consensus 133 e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~ 163 (317)
T 1qwk_A 133 DVWRQFDAVYKAGLAKAVGVSNWNNDQISRA 163 (317)
T ss_dssp HHHHHHHHHHHTTSBSSEEEESCCHHHHHHH
T ss_pred HHHHHHHHHHHcCCeeEEEecCCCHHHHHHH
Confidence 46778999999998875 5554444433
No 8
>1hw6_A 2,5-diketo-D-gluconic acid reductase; aldo-keto reductase, TIM barrel, oxidoreductase; 1.90A {Corynebacterium SP} SCOP: c.1.7.1 PDB: 1a80_A* 1m9h_A*
Probab=12.23 E-value=74 Score=22.42 Aligned_cols=26 Identities=19% Similarity=0.280 Sum_probs=17.8
Q ss_pred HHHHHHHhhcccCcccc----hhhHHHHHH
Q 037730 12 ASVGAVEALKDQGFVRR----NYSLRFLKQ 37 (83)
Q Consensus 12 aSvgaVEalKDQG~CRw----n~alrSl~~ 37 (83)
-.+.++|.|+++|++|. |+....+.+
T Consensus 119 e~~~al~~l~~~Gkir~iGvSn~~~~~l~~ 148 (278)
T 1hw6_A 119 HAWEKMIELRAAGLTRSIGVSNHLVPHLER 148 (278)
T ss_dssp HHHHHHHHHHHTTSEEEEEEESCCHHHHHH
T ss_pred HHHHHHHHHHHcCCccEEEecCCCHHHHHH
Confidence 46678999999988874 555444433
No 9
>1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1 PDB: 1pz0_A*
Probab=12.14 E-value=82 Score=22.29 Aligned_cols=17 Identities=29% Similarity=0.534 Sum_probs=13.6
Q ss_pred HHHHHHHhhcccCcccc
Q 037730 12 ASVGAVEALKDQGFVRR 28 (83)
Q Consensus 12 aSvgaVEalKDQG~CRw 28 (83)
-.+.++|.|+++|++|.
T Consensus 135 e~~~al~~l~~~Gkir~ 151 (312)
T 1pyf_A 135 EAVNALNEMKKAGKIRS 151 (312)
T ss_dssp HHHHHHHHHHHTTSBSC
T ss_pred HHHHHHHHHHHCCCcCE
Confidence 46678999999988764
No 10
>3h7r_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.40A {Arabidopsis thaliana}
Probab=12.06 E-value=82 Score=22.88 Aligned_cols=17 Identities=41% Similarity=0.479 Sum_probs=13.9
Q ss_pred HHHHHHHHhhcccCccc
Q 037730 11 AASVGAVEALKDQGFVR 27 (83)
Q Consensus 11 AaSvgaVEalKDQG~CR 27 (83)
.-.+.++|.|+++|++|
T Consensus 153 ~e~~~aL~~l~~~Gkir 169 (331)
T 3h7r_A 153 TSTWKAMEALYDSGKAR 169 (331)
T ss_dssp HHHHHHHHHHHHTTSBS
T ss_pred HHHHHHHHHHHHcCCCc
Confidence 34678899999999887
Done!