Query 037730
Match_columns 83
No_of_seqs 102 out of 115
Neff 4.2
Searched_HMMs 13730
Date Mon Mar 25 05:51:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037730.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/037730hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1lpva_ g.62.1.1 (A:) DM domai 21.1 5.6 0.00041 21.9 -1.0 16 15-30 17-33 (52)
2 d1v54e_ a.118.11.1 (E:) Cytoch 20.2 29 0.0021 21.3 2.2 26 10-35 57-85 (105)
3 d1fs0g_ c.49.2.1 (G:) ATP synt 18.3 31 0.0023 21.9 2.2 17 22-38 66-84 (230)
4 d1afsa_ c.1.7.1 (A:) 3-alpha-h 18.2 19 0.0014 23.7 1.1 18 11-28 145-162 (319)
5 d2jdig1 c.49.2.1 (G:1-272) ATP 17.2 17 0.0012 23.6 0.6 18 21-38 73-92 (272)
6 d1s1pa_ c.1.7.1 (A:) Prostagla 14.6 33 0.0024 22.4 1.6 28 11-38 140-171 (315)
7 d1us0a_ c.1.7.1 (A:) Aldose re 14.5 29 0.0021 22.6 1.3 16 12-27 140-155 (314)
8 d1f35a_ b.94.1.1 (A:) Olfactor 14.3 15 0.0011 24.1 -0.3 9 73-81 132-140 (162)
9 d1agga_ g.3.6.2 (A:) omega-Aga 14.3 24 0.0017 18.8 0.6 9 21-29 7-15 (48)
10 d1zxfa1 d.129.3.5 (A:1-155) Ca 12.7 51 0.0037 19.0 1.9 14 28-41 137-150 (155)
No 1
>d1lpva_ g.62.1.1 (A:) DM domain of Doublesex (dsx) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=21.11 E-value=5.6 Score=21.90 Aligned_cols=16 Identities=25% Similarity=0.455 Sum_probs=12.5
Q ss_pred HHHHhhccc-Ccccchh
Q 037730 15 GAVEALKDQ-GFVRRNY 30 (83)
Q Consensus 15 gaVEalKDQ-G~CRwn~ 30 (83)
|.+..||++ .+|+|..
T Consensus 17 G~~~~lKgHKr~C~~~~ 33 (52)
T d1lpva_ 17 GLKITLKGHKRYCKFRY 33 (52)
T ss_dssp TCCCTTTTCGGGCTTTT
T ss_pred CceeecCCcccccCCCC
Confidence 456678999 8999963
No 2
>d1v54e_ a.118.11.1 (E:) Cytochrome c oxidase subunit E {Cow (Bos taurus) [TaxId: 9913]}
Probab=20.22 E-value=29 Score=21.32 Aligned_cols=26 Identities=31% Similarity=0.450 Sum_probs=17.5
Q ss_pred HHHHHHHHHhhccc-Cccc--chhhHHHH
Q 037730 10 VAASVGAVEALKDQ-GFVR--RNYSLRFL 35 (83)
Q Consensus 10 vAaSvgaVEalKDQ-G~CR--wn~alrSl 35 (83)
.|.+|..+|+.||. |..+ |.|-|.-|
T Consensus 57 ~alAVR~lE~vK~K~~~~k~~y~yilqel 85 (105)
T d1v54e_ 57 FASAVRILEVVKDKAGPHKEIYPYVIQEL 85 (105)
T ss_dssp HHHHHHHHHHHHHHTTTCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 36789999999998 6444 44444333
No 3
>d1fs0g_ c.49.2.1 (G:) ATP synthase (F1-ATPase), gamma subunit {Escherichia coli [TaxId: 562]}
Probab=18.30 E-value=31 Score=21.94 Aligned_cols=17 Identities=29% Similarity=0.415 Sum_probs=11.3
Q ss_pred ccCcc-cchhhH-HHHHHH
Q 037730 22 DQGFV-RRNYSL-RFLKQR 38 (83)
Q Consensus 22 DQG~C-Rwn~al-rSl~~~ 38 (83)
|+|+| -.|..+ |.+.+.
T Consensus 66 DrGLCG~~Ns~i~k~~~~~ 84 (230)
T d1fs0g_ 66 DRGLCGGLNINLFKKLLAE 84 (230)
T ss_dssp SSSCSTTHHHHHHHHHHHH
T ss_pred CcccccccchhHHHHHHHH
Confidence 99999 677654 544443
No 4
>d1afsa_ c.1.7.1 (A:) 3-alpha-hydroxysteroid dehydrogenase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=18.24 E-value=19 Score=23.67 Aligned_cols=18 Identities=28% Similarity=0.425 Sum_probs=14.5
Q ss_pred HHHHHHHHhhcccCcccc
Q 037730 11 AASVGAVEALKDQGFVRR 28 (83)
Q Consensus 11 AaSvgaVEalKDQG~CRw 28 (83)
...+.++|.|||+|++|.
T Consensus 145 ~e~~~~l~~l~~~Gkir~ 162 (319)
T d1afsa_ 145 CDTWEAMEKCKDAGLAKS 162 (319)
T ss_dssp HHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHHHcCCEEE
Confidence 456789999999988763
No 5
>d2jdig1 c.49.2.1 (G:1-272) ATP synthase (F1-ATPase), gamma subunit {Cow (Bos taurus) [TaxId: 9913]}
Probab=17.23 E-value=17 Score=23.64 Aligned_cols=18 Identities=22% Similarity=0.407 Sum_probs=9.2
Q ss_pred cccCcc-cchhhH-HHHHHH
Q 037730 21 KDQGFV-RRNYSL-RFLKQR 38 (83)
Q Consensus 21 KDQG~C-Rwn~al-rSl~~~ 38 (83)
-|+|+| ..|..+ |.+.+.
T Consensus 73 SDrGLcG~fN~~iik~~~~~ 92 (272)
T d2jdig1 73 SDRGLCGAIHSSVAKQMKSE 92 (272)
T ss_dssp CSCCCSTTHHHHHC------
T ss_pred cCCCCCCCccccHHHHHHHH
Confidence 399999 777664 555433
No 6
>d1s1pa_ c.1.7.1 (A:) Prostaglandin d2 11-ketoreductase (akr1c3) {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.63 E-value=33 Score=22.37 Aligned_cols=28 Identities=29% Similarity=0.421 Sum_probs=19.3
Q ss_pred HHHHHHHHhhcccCccc----chhhHHHHHHH
Q 037730 11 AASVGAVEALKDQGFVR----RNYSLRFLKQR 38 (83)
Q Consensus 11 AaSvgaVEalKDQG~CR----wn~alrSl~~~ 38 (83)
...+.++|.||++|++| -|+....++..
T Consensus 140 ~~~~~~l~~l~~~G~ir~iGvS~~~~~~l~~~ 171 (315)
T d1s1pa_ 140 CTTWEAMEKCKDAGLAKSIGVSNFNRRQLEMI 171 (315)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEESCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCcccccCCCCCCHHHHHHH
Confidence 35677899999999887 34555555443
No 7
>d1us0a_ c.1.7.1 (A:) Aldose reductase (aldehyde reductase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.52 E-value=29 Score=22.58 Aligned_cols=16 Identities=38% Similarity=0.628 Sum_probs=13.2
Q ss_pred HHHHHHHhhcccCccc
Q 037730 12 ASVGAVEALKDQGFVR 27 (83)
Q Consensus 12 aSvgaVEalKDQG~CR 27 (83)
..+.+.|.||++|+.|
T Consensus 140 e~~~~L~~lk~~G~Ir 155 (314)
T d1us0a_ 140 DTWAAMEELVDEGLVK 155 (314)
T ss_dssp HHHHHHHHHHHTTSBS
T ss_pred HHHHHHHHHHHcCCee
Confidence 3577899999999876
No 8
>d1f35a_ b.94.1.1 (A:) Olfactory marker protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=14.34 E-value=15 Score=24.11 Aligned_cols=9 Identities=56% Similarity=0.870 Sum_probs=7.1
Q ss_pred hhhhhhhcc
Q 037730 73 ESLRKVMYS 81 (83)
Q Consensus 73 EsLRtVMyL 81 (83)
...|+|||+
T Consensus 132 AkiRKVMYF 140 (162)
T d1f35a_ 132 AKIRKVMYF 140 (162)
T ss_dssp HHHCSEEEE
T ss_pred HHHHhheee
Confidence 357999996
No 9
>d1agga_ g.3.6.2 (A:) omega-Agatoxin IV, IVa, IVb {Funnel web spider (Agelenopsis aperta) [TaxId: 6908]}
Probab=14.31 E-value=24 Score=18.79 Aligned_cols=9 Identities=22% Similarity=0.228 Sum_probs=7.2
Q ss_pred cccCcccch
Q 037730 21 KDQGFVRRN 29 (83)
Q Consensus 21 KDQG~CRwn 29 (83)
||-|.|.|.
T Consensus 7 ~dyg~c~wg 15 (48)
T d1agga_ 7 EDYGKCTWG 15 (48)
T ss_dssp CSSCBCCSS
T ss_pred hhccccccC
Confidence 677999995
No 10
>d1zxfa1 d.129.3.5 (A:1-155) Calicheamicin gene cluster protein CalC {Micromonospora echinospora [TaxId: 1877]}
Probab=12.66 E-value=51 Score=18.98 Aligned_cols=14 Identities=7% Similarity=0.131 Sum_probs=12.2
Q ss_pred chhhHHHHHHHHHH
Q 037730 28 RNYSLRFLKQRAET 41 (83)
Q Consensus 28 wn~alrSl~~~ak~ 41 (83)
|++.|..|+.....
T Consensus 137 W~~~L~~L~~~le~ 150 (155)
T d1zxfa1 137 WPTILQSFQDKIDE 150 (155)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhh
Confidence 99999999988764
Done!