Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>037732
YTAIASIDDLLMYGMGMGLFQGVNKMQVARARAHGLVHKLKACCMFSMHDVVRDVAISIA
STEQNVFSATEEQTNLLLEVVECPQLELLFICADKESSSLTIPNKFFERMIQVRVINFSY
MNLLSLPSSLGLLSNLQNLSLYNCKLLDITVIRDLKKLAVLCLRGSDIKRLPVEVGELTL
LRLLDLRDCMELEVIPPNILSNLSHLEELYMGPRSFDKWEVEVEGVKNASLHELKHLISL
ELQIQDVNTFPRGLFLEKLETFKILIGGVWGWEYADIWCREFKIDLDSKIRLKDGLILKL
EGIEDLWLSYLEEQDVNYFVNELVKVGPSQLKHLYIRGSHLTLNPAESNV

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  037732
        (350 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2131689 - symbol:AT4G27220 species:3702 "Arabi...   107  1.1e-05   2


>TAIR|locus:2131689 [details] [associations]
            symbol:AT4G27220 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0006952 "defense response"
            evidence=IEA;ISS] [GO:0043531 "ADP binding" evidence=IEA]
            InterPro:IPR000767 InterPro:IPR002182 Pfam:PF00931 PRINTS:PR00364
            GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006952
            EMBL:AL161566 eggNOG:COG4886 GO:GO:0043531 HOGENOM:HOG000091014
            ProtClustDB:CLSN2686073 EMBL:AL030978 EMBL:DQ446872 IPI:IPI00548786
            PIR:T05746 RefSeq:NP_194452.1 UniGene:At.65426
            ProteinModelPortal:O81825 SMR:O81825 PRIDE:O81825
            EnsemblPlants:AT4G27220.1 GeneID:828830 KEGG:ath:AT4G27220
            TAIR:At4g27220 InParanoid:O81825 OMA:LAINIMA PhylomeDB:O81825
            ArrayExpress:O81825 Genevestigator:O81825 Uniprot:O81825
        Length = 919

 Score = 107 (42.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
 Identities = 48/195 (24%), Positives = 78/195 (40%)

Query:    61 STEQNVFSATEEQTNLLLEVVECPQLELLFICADKESSSLTIPNKFFERMIQVRVINFSY 120
             S+ Q V     +   L   V+E   +E L +     S    +PN F +    +R+++ S 
Sbjct:   470 SSVQRVSLMANKLERLPNNVIE--GVETLVLLLQGNSHVKEVPNGFLQAFPNLRILDLSG 527

Query:   121 MXXXXXXXXXXXXXXXXXXXXYNCKLL-DITVIRDLKKLAVLCLRGSDIKRLPVEVGEXX 179
             +                     NCK L ++  +  L KL  L L  S I+ LP  +    
Sbjct:   528 VRIRTLPDSFSNLHSLRSLVLRNCKKLRNLPSLESLVKLQFLDLHESAIRELPRGLEALS 587

Query:   180 XXXXXXXXXCMELEVIPPNILSNLSHLEELYMGPRSFDKWEVEVEGVKN-ASLHE---LK 235
                        +L+ IP   +  LS LE L M   ++  W ++ E  +  A+L E   L 
Sbjct:   588 SLRYICVSNTYQLQSIPAGTILQLSSLEVLDMAGSAYS-WGIKGEEREGQATLDEVTCLP 646

Query:   236 HLISLELQIQDVNTF 250
             HL  L +++ DV +F
Sbjct:   647 HLQFLAIKLLDVLSF 661

 Score = 74 (31.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
 Identities = 22/70 (31%), Positives = 32/70 (45%)

Query:     7 IDDLLMYGMGMGLFQGVNKMQVARARAHGLVHKLKACCMFS---------MHDVVRDVAI 57
             + +L+MY +  GL  G +  +        LV +LK  C+           MHDVVRD AI
Sbjct:   381 VSELIMYWVAEGLLDGQHHYEDMMNEGVTLVERLKDSCLLEDGDSCDTVKMHDVVRDFAI 440

Query:    58 SIASTEQNVF 67
                S++   F
Sbjct:   441 WFMSSQGEGF 450


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.139   0.414    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      350       319   0.00084  116 3  11 22  0.50    33
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  613 (65 KB)
  Total size of DFA:  220 KB (2121 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  24.66u 0.11s 24.77t   Elapsed:  00:00:01
  Total cpu time:  24.66u 0.11s 24.77t   Elapsed:  00:00:01
  Start:  Thu May  9 21:07:57 2013   End:  Thu May  9 21:07:58 2013

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