Query 037735
Match_columns 329
No_of_seqs 147 out of 593
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 05:58:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037735.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037735hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1m6e_X S-adenosyl-L-methionnin 100.0 1.5E-86 5E-91 644.1 23.1 324 1-329 9-357 (359)
2 2efj_A 3,7-dimethylxanthine me 100.0 4.4E-84 1.5E-88 631.4 23.1 317 1-329 9-378 (384)
3 3b5i_A S-adenosyl-L-methionine 100.0 2.7E-83 9.3E-88 624.8 27.9 325 1-327 9-374 (374)
4 2p35_A Trans-aconitate 2-methy 99.7 1.3E-16 4.4E-21 144.5 14.3 223 7-308 8-237 (259)
5 3ccf_A Cyclopropane-fatty-acyl 99.7 3E-16 1E-20 144.8 16.5 222 7-307 32-257 (279)
6 2yqz_A Hypothetical protein TT 99.6 2E-15 6.7E-20 136.8 14.2 251 8-329 10-262 (263)
7 3bus_A REBM, methyltransferase 99.5 3.9E-13 1.3E-17 122.7 20.2 193 41-302 60-256 (273)
8 3dtn_A Putative methyltransfer 99.5 3.7E-13 1.3E-17 120.2 14.2 161 41-258 43-214 (234)
9 3hem_A Cyclopropane-fatty-acyl 99.5 3.8E-12 1.3E-16 118.6 21.3 169 41-260 71-245 (302)
10 4hg2_A Methyltransferase type 99.5 6.1E-13 2.1E-17 122.8 13.6 192 41-304 38-231 (257)
11 3ujc_A Phosphoethanolamine N-m 99.4 6E-12 2.1E-16 113.7 19.1 153 41-259 54-207 (266)
12 3f4k_A Putative methyltransfer 99.4 4.4E-12 1.5E-16 114.6 17.9 207 42-329 46-257 (257)
13 2o57_A Putative sarcosine dime 99.4 5.2E-12 1.8E-16 116.9 18.5 150 41-258 81-234 (297)
14 3hnr_A Probable methyltransfer 99.4 4E-13 1.4E-17 118.6 10.1 153 42-258 45-201 (220)
15 2aot_A HMT, histamine N-methyl 99.4 1.8E-12 6.3E-17 120.4 14.1 156 41-256 51-219 (292)
16 3kkz_A Uncharacterized protein 99.4 8.8E-12 3E-16 113.8 17.6 208 41-329 45-257 (267)
17 3dli_A Methyltransferase; PSI- 99.4 1.6E-12 5.6E-17 116.8 12.5 173 8-260 12-186 (240)
18 1kpg_A CFA synthase;, cyclopro 99.4 1.9E-11 6.5E-16 112.6 19.9 160 41-258 63-228 (287)
19 1vl5_A Unknown conserved prote 99.4 4.8E-13 1.6E-17 121.6 9.0 153 41-259 36-191 (260)
20 3ege_A Putative methyltransfer 99.4 2.8E-12 9.7E-17 117.1 12.6 192 41-305 33-231 (261)
21 3sm3_A SAM-dependent methyltra 99.4 4.4E-12 1.5E-16 112.3 12.7 163 41-259 29-208 (235)
22 1xxl_A YCGJ protein; structura 99.4 1.9E-12 6.5E-17 116.6 10.2 153 41-259 20-175 (239)
23 4htf_A S-adenosylmethionine-de 99.4 5.6E-12 1.9E-16 116.2 12.9 157 41-259 67-233 (285)
24 3mgg_A Methyltransferase; NYSG 99.3 1.6E-11 5.5E-16 112.3 15.1 161 41-259 36-199 (276)
25 2p7i_A Hypothetical protein; p 99.3 9.3E-12 3.2E-16 110.8 11.9 146 42-258 42-199 (250)
26 3vc1_A Geranyl diphosphate 2-C 99.3 1.5E-11 5.2E-16 115.3 13.5 151 41-259 116-270 (312)
27 3g5l_A Putative S-adenosylmeth 99.3 1.1E-11 3.9E-16 111.8 11.8 163 42-260 44-218 (253)
28 3dh0_A SAM dependent methyltra 99.3 1.6E-11 5.4E-16 108.2 12.2 145 41-260 36-183 (219)
29 3l8d_A Methyltransferase; stru 99.3 2.8E-11 9.6E-16 108.1 13.9 149 41-258 52-200 (242)
30 4gek_A TRNA (CMO5U34)-methyltr 99.3 3.1E-11 1.1E-15 111.5 14.4 159 41-255 69-242 (261)
31 2fk8_A Methoxy mycolic acid sy 99.3 1.2E-10 4.1E-15 109.1 18.5 161 41-259 89-255 (318)
32 3lcc_A Putative methyl chlorid 99.3 2.7E-11 9.1E-16 108.4 12.6 139 42-259 66-208 (235)
33 3h2b_A SAM-dependent methyltra 99.3 3.7E-11 1.3E-15 104.7 12.2 142 43-259 42-183 (203)
34 3ou2_A SAM-dependent methyltra 99.3 4.9E-11 1.7E-15 104.5 12.8 152 42-258 46-205 (218)
35 1pjz_A Thiopurine S-methyltran 99.2 2.9E-11 1E-15 106.8 11.0 141 41-259 21-177 (203)
36 3ocj_A Putative exported prote 99.2 8.9E-11 3E-15 109.7 14.3 166 41-258 117-291 (305)
37 1nkv_A Hypothetical protein YJ 99.2 8.8E-11 3E-15 105.9 13.5 149 41-258 35-187 (256)
38 3g5t_A Trans-aconitate 3-methy 99.2 5.4E-11 1.8E-15 110.6 12.4 198 41-299 35-271 (299)
39 4fsd_A Arsenic methyltransfera 99.2 9.7E-11 3.3E-15 113.4 13.6 150 42-256 83-249 (383)
40 3cc8_A Putative methyltransfer 99.2 3.4E-11 1.1E-15 106.0 9.2 149 41-261 31-188 (230)
41 1xtp_A LMAJ004091AAA; SGPP, st 99.2 3.2E-11 1.1E-15 108.5 9.0 146 41-258 92-238 (254)
42 2qe6_A Uncharacterized protein 99.2 1.8E-10 6.2E-15 106.9 14.4 157 42-264 77-249 (274)
43 3dlc_A Putative S-adenosyl-L-m 99.2 1.4E-11 4.7E-16 107.7 6.2 150 42-258 43-203 (219)
44 2g72_A Phenylethanolamine N-me 99.2 4.1E-11 1.4E-15 110.9 9.4 152 42-260 71-258 (289)
45 3bkx_A SAM-dependent methyltra 99.2 3.3E-10 1.1E-14 103.3 15.3 164 41-258 42-219 (275)
46 3bkw_A MLL3908 protein, S-aden 99.2 1.1E-10 3.8E-15 104.0 11.7 161 42-260 43-216 (243)
47 3e8s_A Putative SAM dependent 99.2 2.7E-11 9.2E-16 106.5 7.1 154 42-258 52-209 (227)
48 1vlm_A SAM-dependent methyltra 99.2 5.7E-10 2E-14 98.8 15.5 141 43-258 48-188 (219)
49 2gb4_A Thiopurine S-methyltran 99.2 3.4E-10 1.2E-14 103.9 13.6 141 42-260 68-229 (252)
50 2ex4_A Adrenal gland protein A 99.2 7E-11 2.4E-15 106.2 8.8 144 42-258 79-225 (241)
51 2a14_A Indolethylamine N-methy 99.2 1.3E-10 4.5E-15 106.4 10.7 151 41-259 54-239 (263)
52 3e23_A Uncharacterized protein 99.1 8.5E-11 2.9E-15 103.2 8.7 140 42-258 43-182 (211)
53 2gs9_A Hypothetical protein TT 99.1 2E-10 6.8E-15 100.7 10.7 134 42-245 36-170 (211)
54 3pfg_A N-methyltransferase; N, 99.1 1.3E-10 4.6E-15 105.5 9.6 106 41-197 49-155 (263)
55 3bgv_A MRNA CAP guanine-N7 met 99.1 1.8E-10 6.2E-15 107.8 10.7 108 42-196 34-158 (313)
56 3i9f_A Putative type 11 methyl 99.1 5.4E-10 1.8E-14 94.6 12.0 134 41-259 16-149 (170)
57 3gu3_A Methyltransferase; alph 99.1 6.2E-10 2.1E-14 102.8 12.9 160 41-257 21-189 (284)
58 3lst_A CALO1 methyltransferase 99.1 8.8E-10 3E-14 105.1 14.2 149 41-257 183-335 (348)
59 3bxo_A N,N-dimethyltransferase 99.1 6.8E-10 2.3E-14 98.7 12.5 107 41-198 39-146 (239)
60 1y8c_A S-adenosylmethionine-de 99.1 4.6E-10 1.6E-14 99.9 10.9 106 42-196 37-145 (246)
61 4e2x_A TCAB9; kijanose, tetron 99.1 1.5E-10 5.1E-15 112.7 7.8 147 42-259 107-254 (416)
62 3i53_A O-methyltransferase; CO 99.1 1.4E-09 4.9E-14 102.6 14.3 150 41-258 168-321 (332)
63 3g2m_A PCZA361.24; SAM-depende 99.1 1.8E-10 6.2E-15 107.0 7.8 166 43-260 83-276 (299)
64 1ri5_A MRNA capping enzyme; me 99.1 1.3E-09 4.4E-14 100.0 13.2 110 41-196 63-177 (298)
65 3giw_A Protein of unknown func 99.1 8.2E-10 2.8E-14 103.1 11.8 162 42-264 78-254 (277)
66 3gwz_A MMCR; methyltransferase 99.1 1.8E-09 6E-14 103.9 14.6 151 41-257 201-355 (369)
67 3jwg_A HEN1, methyltransferase 99.1 3.8E-10 1.3E-14 99.6 9.1 150 42-257 29-191 (219)
68 3ofk_A Nodulation protein S; N 99.1 2.1E-10 7.2E-15 100.9 7.0 108 41-197 50-158 (216)
69 2r3s_A Uncharacterized protein 99.0 2.3E-09 7.8E-14 100.7 14.0 155 41-258 164-323 (335)
70 3mcz_A O-methyltransferase; ad 99.0 2.6E-09 8.9E-14 101.4 14.1 151 43-254 180-335 (352)
71 3jwh_A HEN1; methyltransferase 99.0 1.8E-09 6E-14 95.3 12.1 149 42-256 29-190 (217)
72 2kw5_A SLR1183 protein; struct 99.0 7E-10 2.4E-14 96.5 9.1 139 45-259 32-172 (202)
73 3reo_A (ISO)eugenol O-methyltr 99.0 6.8E-09 2.3E-13 99.9 16.8 154 41-259 202-356 (368)
74 2i62_A Nicotinamide N-methyltr 99.0 2.4E-09 8.2E-14 96.5 12.0 148 41-259 55-240 (265)
75 3p9c_A Caffeic acid O-methyltr 99.0 8.8E-09 3E-13 99.1 16.5 152 42-259 201-354 (364)
76 2xvm_A Tellurite resistance pr 99.0 8.9E-10 3E-14 95.0 7.9 139 42-258 32-173 (199)
77 3dp7_A SAM-dependent methyltra 99.0 2.5E-09 8.6E-14 102.6 11.5 155 41-256 178-340 (363)
78 2ip2_A Probable phenazine-spec 99.0 1.9E-08 6.4E-13 94.8 16.8 149 44-258 169-322 (334)
79 3ggd_A SAM-dependent methyltra 98.9 2.1E-09 7.2E-14 96.4 9.3 154 41-259 55-220 (245)
80 1fp1_D Isoliquiritigenin 2'-O- 98.9 8E-09 2.7E-13 99.3 13.8 150 41-258 208-360 (372)
81 1qzz_A RDMB, aclacinomycin-10- 98.9 3.9E-09 1.3E-13 100.9 11.4 154 41-259 181-340 (374)
82 2vdw_A Vaccinia virus capping 98.9 1.1E-09 3.8E-14 103.0 7.3 112 42-197 48-173 (302)
83 4a6d_A Hydroxyindole O-methylt 98.9 1.1E-08 3.6E-13 98.1 14.1 151 42-257 179-333 (353)
84 3cgg_A SAM-dependent methyltra 98.9 9.5E-09 3.2E-13 87.7 12.1 129 41-257 45-174 (195)
85 3m70_A Tellurite resistance pr 98.9 4.7E-09 1.6E-13 96.5 10.5 138 42-257 120-259 (286)
86 2p8j_A S-adenosylmethionine-de 98.9 4E-09 1.4E-13 91.8 9.5 111 41-199 22-134 (209)
87 2zfu_A Nucleomethylin, cerebra 98.9 2.8E-09 9.5E-14 93.7 8.5 112 42-257 67-178 (215)
88 3opn_A Putative hemolysin; str 98.9 1.6E-09 5.6E-14 98.2 6.9 146 41-259 36-185 (232)
89 1tw3_A COMT, carminomycin 4-O- 98.9 1.1E-08 3.8E-13 97.3 12.9 154 41-259 182-340 (360)
90 1x19_A CRTF-related protein; m 98.9 1.5E-08 5.3E-13 96.6 13.6 153 41-258 189-348 (359)
91 3thr_A Glycine N-methyltransfe 98.9 2.4E-09 8.1E-14 98.6 7.3 110 42-195 57-177 (293)
92 3d2l_A SAM-dependent methyltra 98.9 3.8E-09 1.3E-13 94.0 8.3 104 43-196 34-140 (243)
93 3hp7_A Hemolysin, putative; st 98.9 7.4E-09 2.5E-13 97.3 10.5 145 41-258 84-232 (291)
94 3dxy_A TRNA (guanine-N(7)-)-me 98.9 2.6E-09 9E-14 95.7 7.2 141 15-193 3-150 (218)
95 4df3_A Fibrillarin-like rRNA/T 98.9 8.9E-09 3E-13 93.8 10.3 107 42-195 77-184 (233)
96 3q87_B N6 adenine specific DNA 98.8 4.5E-08 1.5E-12 83.8 13.7 126 43-258 24-149 (170)
97 2avn_A Ubiquinone/menaquinone 98.8 5.9E-09 2E-13 94.8 8.5 154 42-259 54-214 (260)
98 3iv6_A Putative Zn-dependent a 98.8 5.1E-09 1.7E-13 97.0 6.8 101 41-194 44-149 (261)
99 3mq2_A 16S rRNA methyltransfer 98.8 4E-08 1.4E-12 86.6 12.1 144 41-259 26-185 (218)
100 3g07_A 7SK snRNA methylphospha 98.8 8.2E-09 2.8E-13 96.1 6.8 110 42-194 46-221 (292)
101 1zg3_A Isoflavanone 4'-O-methy 98.8 2.3E-08 7.8E-13 95.5 9.9 151 42-257 193-346 (358)
102 2pxx_A Uncharacterized protein 98.8 5.7E-08 1.9E-12 84.4 11.4 122 41-197 41-163 (215)
103 1ve3_A Hypothetical protein PH 98.7 8.6E-09 2.9E-13 90.7 6.1 106 42-196 38-145 (227)
104 3grz_A L11 mtase, ribosomal pr 98.7 2.8E-08 9.5E-13 86.7 8.8 122 42-257 60-184 (205)
105 1fp2_A Isoflavone O-methyltran 98.7 7.6E-08 2.6E-12 91.6 12.4 150 42-257 188-340 (352)
106 1zx0_A Guanidinoacetate N-meth 98.7 2.1E-08 7.3E-13 89.7 7.9 109 41-195 59-172 (236)
107 3id6_C Fibrillarin-like rRNA/T 98.7 3.4E-08 1.2E-12 89.9 9.0 132 9-195 50-183 (232)
108 3hm2_A Precorrin-6Y C5,15-meth 98.7 3.1E-08 1.1E-12 83.8 7.9 102 41-196 24-130 (178)
109 1ej0_A FTSJ; methyltransferase 98.7 2.4E-08 8.3E-13 83.4 6.7 111 42-197 22-140 (180)
110 2ld4_A Anamorsin; methyltransf 98.7 3.4E-07 1.2E-11 78.0 13.3 118 42-257 12-133 (176)
111 1wzn_A SAM-dependent methyltra 98.6 8.9E-08 3E-12 85.9 9.8 118 25-195 27-147 (252)
112 2plw_A Ribosomal RNA methyltra 98.6 7.6E-08 2.6E-12 83.4 8.1 111 42-196 22-157 (201)
113 1yzh_A TRNA (guanine-N(7)-)-me 98.6 1.6E-07 5.6E-12 82.7 10.0 113 42-193 41-156 (214)
114 3m33_A Uncharacterized protein 98.6 2E-07 6.9E-12 82.9 10.5 120 41-259 47-168 (226)
115 3p9n_A Possible methyltransfer 98.6 5.4E-08 1.8E-12 84.1 6.2 108 42-198 44-158 (189)
116 2fca_A TRNA (guanine-N(7)-)-me 98.6 9.7E-08 3.3E-12 84.7 7.9 111 42-193 38-153 (213)
117 3p2e_A 16S rRNA methylase; met 98.6 3.3E-07 1.1E-11 82.3 11.1 155 41-261 23-188 (225)
118 1p91_A Ribosomal RNA large sub 98.6 3.3E-07 1.1E-11 83.2 11.2 100 41-198 84-183 (269)
119 3eey_A Putative rRNA methylase 98.6 2E-07 6.9E-12 80.5 9.3 115 42-195 22-141 (197)
120 3q7e_A Protein arginine N-meth 98.6 1.1E-07 3.7E-12 91.0 8.2 103 42-192 66-172 (349)
121 1dus_A MJ0882; hypothetical pr 98.6 3.4E-08 1.1E-12 84.2 3.9 105 42-197 52-161 (194)
122 3e05_A Precorrin-6Y C5,15-meth 98.5 8.2E-08 2.8E-12 83.8 6.4 103 41-195 39-144 (204)
123 2nxc_A L11 mtase, ribosomal pr 98.5 2.5E-07 8.6E-12 84.4 9.6 122 42-257 120-243 (254)
124 3sso_A Methyltransferase; macr 98.5 3.7E-07 1.3E-11 89.3 11.2 128 41-223 215-359 (419)
125 3r0q_C Probable protein argini 98.5 2.4E-07 8.3E-12 89.5 9.4 105 41-194 62-170 (376)
126 3mti_A RRNA methylase; SAM-dep 98.5 2.3E-07 8E-12 79.3 8.2 112 42-195 22-137 (185)
127 3ckk_A TRNA (guanine-N(7)-)-me 98.5 1.6E-07 5.3E-12 85.1 7.3 116 41-194 45-169 (235)
128 3dmg_A Probable ribosomal RNA 98.5 1.9E-07 6.6E-12 90.7 7.8 106 42-193 233-340 (381)
129 2yxd_A Probable cobalt-precorr 98.5 6.1E-07 2.1E-11 75.6 9.8 97 41-195 34-133 (183)
130 4dzr_A Protein-(glutamine-N5) 98.5 8.9E-08 3.1E-12 83.0 4.1 126 41-195 29-166 (215)
131 3lbf_A Protein-L-isoaspartate 98.5 1.6E-07 5.4E-12 82.1 5.6 98 41-195 76-176 (210)
132 1nt2_A Fibrillarin-like PRE-rR 98.5 6.5E-07 2.2E-11 79.5 9.7 101 42-195 57-163 (210)
133 3njr_A Precorrin-6Y methylase; 98.4 6.4E-07 2.2E-11 78.9 9.3 99 41-195 54-156 (204)
134 1vbf_A 231AA long hypothetical 98.4 2.7E-07 9.2E-12 81.8 6.8 98 41-195 69-167 (231)
135 4dcm_A Ribosomal RNA large sub 98.4 2.9E-07 9.8E-12 89.2 7.3 106 43-193 223-334 (375)
136 3orh_A Guanidinoacetate N-meth 98.4 4.3E-07 1.5E-11 81.8 8.0 108 41-193 59-170 (236)
137 3fzg_A 16S rRNA methylase; met 98.4 1.5E-07 5.3E-12 83.3 4.7 116 26-194 34-152 (200)
138 2yxe_A Protein-L-isoaspartate 98.4 3.6E-07 1.2E-11 80.0 6.5 101 41-195 76-179 (215)
139 2ipx_A RRNA 2'-O-methyltransfe 98.4 9.9E-07 3.4E-11 78.6 8.6 104 42-195 77-184 (233)
140 3lpm_A Putative methyltransfer 98.4 3.4E-06 1.2E-10 76.6 12.2 121 42-193 49-176 (259)
141 2fyt_A Protein arginine N-meth 98.3 7.7E-07 2.6E-11 84.8 8.0 101 42-190 64-168 (340)
142 1g6q_1 HnRNP arginine N-methyl 98.3 1.7E-06 5.9E-11 81.8 10.3 101 43-191 39-143 (328)
143 1yb2_A Hypothetical protein TA 98.3 4.2E-07 1.4E-11 83.5 5.6 100 41-194 109-212 (275)
144 1af7_A Chemotaxis receptor met 98.3 2.5E-07 8.7E-12 86.0 4.1 114 42-191 105-250 (274)
145 2pjd_A Ribosomal RNA small sub 98.3 1.5E-07 5.2E-12 89.6 2.5 106 43-194 197-304 (343)
146 1o9g_A RRNA methyltransferase; 98.3 1.4E-06 4.9E-11 78.5 8.5 114 42-193 51-214 (250)
147 3bzb_A Uncharacterized protein 98.3 1.6E-06 5.3E-11 80.2 8.9 107 42-195 79-207 (281)
148 3fpf_A Mtnas, putative unchara 98.3 2.5E-06 8.5E-11 80.3 10.3 99 41-193 121-222 (298)
149 2ozv_A Hypothetical protein AT 98.3 2E-06 6.7E-11 78.7 9.4 120 42-193 36-170 (260)
150 3htx_A HEN1; HEN1, small RNA m 98.3 5.7E-07 2E-11 94.7 6.4 108 42-196 721-837 (950)
151 1i9g_A Hypothetical protein RV 98.3 2.2E-06 7.5E-11 78.2 9.6 101 42-195 99-205 (280)
152 2nyu_A Putative ribosomal RNA 98.3 9.1E-07 3.1E-11 76.1 6.7 116 42-196 22-148 (196)
153 1xdz_A Methyltransferase GIDB; 98.3 6.5E-07 2.2E-11 80.4 5.7 98 42-192 70-173 (240)
154 2esr_A Methyltransferase; stru 98.3 1.2E-06 4.1E-11 74.3 7.0 106 42-198 31-143 (177)
155 1fbn_A MJ fibrillarin homologu 98.3 1.8E-06 6.3E-11 76.9 8.5 101 42-194 74-179 (230)
156 1jsx_A Glucose-inhibited divis 98.3 9.7E-07 3.3E-11 76.7 6.5 97 43-193 66-165 (207)
157 3adn_A Spermidine synthase; am 98.3 1.7E-06 5.7E-11 81.1 8.4 111 41-195 82-200 (294)
158 3dr5_A Putative O-methyltransf 98.3 4.8E-07 1.6E-11 81.0 4.4 100 44-194 58-164 (221)
159 3mb5_A SAM-dependent methyltra 98.3 1.3E-06 4.4E-11 78.6 7.3 101 41-195 92-196 (255)
160 2ift_A Putative methylase HI07 98.3 1.1E-06 3.7E-11 77.1 6.5 104 43-197 54-167 (201)
161 2vdv_E TRNA (guanine-N(7)-)-me 98.3 2.5E-06 8.4E-11 76.9 8.9 114 42-193 49-173 (246)
162 1l3i_A Precorrin-6Y methyltran 98.3 6.6E-07 2.2E-11 75.9 4.6 100 41-195 32-136 (192)
163 1ws6_A Methyltransferase; stru 98.2 9.8E-07 3.3E-11 73.8 5.6 104 42-198 41-152 (171)
164 1dl5_A Protein-L-isoaspartate 98.2 1.4E-06 4.7E-11 81.9 7.1 101 42-196 75-178 (317)
165 1g8a_A Fibrillarin-like PRE-rR 98.2 3.9E-06 1.3E-10 74.2 9.7 102 42-193 73-178 (227)
166 2fhp_A Methylase, putative; al 98.2 1E-06 3.6E-11 74.9 5.5 106 42-198 44-159 (187)
167 2h00_A Methyltransferase 10 do 98.2 1.2E-06 4E-11 79.1 6.1 165 42-258 65-238 (254)
168 2pwy_A TRNA (adenine-N(1)-)-me 98.2 4.1E-06 1.4E-10 75.0 9.5 100 42-194 96-199 (258)
169 2pbf_A Protein-L-isoaspartate 98.2 1.2E-06 4.1E-11 77.5 5.7 104 42-195 80-195 (227)
170 3evz_A Methyltransferase; NYSG 98.2 1.5E-06 5.3E-11 76.8 6.4 123 41-194 54-180 (230)
171 1jg1_A PIMT;, protein-L-isoasp 98.2 1.6E-06 5.5E-11 77.5 6.2 98 42-196 91-192 (235)
172 2b3t_A Protein methyltransfera 98.2 2.4E-06 8.2E-11 78.3 7.5 122 42-192 109-237 (276)
173 3u81_A Catechol O-methyltransf 98.2 3.6E-07 1.2E-11 80.9 1.8 108 42-195 58-172 (221)
174 1i1n_A Protein-L-isoaspartate 98.2 3.9E-06 1.3E-10 74.0 8.5 100 42-195 77-184 (226)
175 2fpo_A Methylase YHHF; structu 98.2 3.6E-06 1.2E-10 73.8 8.0 104 43-197 55-164 (202)
176 2frn_A Hypothetical protein PH 98.2 8E-06 2.7E-10 75.4 10.4 126 43-256 126-255 (278)
177 3tfw_A Putative O-methyltransf 98.2 1.2E-06 4.1E-11 79.4 4.7 106 42-195 63-172 (248)
178 1ixk_A Methyltransferase; open 98.2 3.9E-06 1.3E-10 79.0 8.2 125 42-195 118-248 (315)
179 3dou_A Ribosomal RNA large sub 98.2 4.3E-06 1.5E-10 73.1 7.8 108 41-196 24-142 (191)
180 3gdh_A Trimethylguanosine synt 98.1 1.8E-07 6E-12 83.6 -1.2 100 42-193 78-181 (241)
181 3uwp_A Histone-lysine N-methyl 98.1 2.8E-06 9.4E-11 83.5 7.0 107 41-197 172-293 (438)
182 2gpy_A O-methyltransferase; st 98.1 1.7E-06 5.8E-11 77.0 5.0 101 42-194 54-161 (233)
183 3gjy_A Spermidine synthase; AP 98.1 4E-06 1.4E-10 79.6 7.7 113 41-196 88-203 (317)
184 3ntv_A MW1564 protein; rossman 98.1 1.8E-06 6.2E-11 77.2 5.1 100 42-194 71-177 (232)
185 3bwc_A Spermidine synthase; SA 98.1 3.5E-06 1.2E-10 79.0 6.9 106 41-193 94-210 (304)
186 2bm8_A Cephalosporin hydroxyla 98.1 3.5E-06 1.2E-10 76.0 6.6 102 43-194 82-188 (236)
187 1uir_A Polyamine aminopropyltr 98.1 2E-06 6.8E-11 81.1 5.1 114 41-196 76-198 (314)
188 2wa2_A Non-structural protein 98.1 4.8E-06 1.7E-10 77.3 7.6 107 42-195 82-195 (276)
189 1r18_A Protein-L-isoaspartate( 98.1 1.5E-06 5.2E-11 77.1 3.7 105 42-196 84-197 (227)
190 1inl_A Spermidine synthase; be 98.1 3.6E-06 1.2E-10 78.7 6.4 111 41-194 89-206 (296)
191 2oxt_A Nucleoside-2'-O-methylt 98.1 5.1E-06 1.7E-10 76.7 7.2 107 42-195 74-187 (265)
192 3g89_A Ribosomal RNA small sub 98.1 8.2E-06 2.8E-10 74.3 8.3 99 42-193 80-184 (249)
193 2hnk_A SAM-dependent O-methylt 98.1 1.8E-06 6.2E-11 77.3 3.7 105 42-194 60-182 (239)
194 1o54_A SAM-dependent O-methylt 98.1 6.8E-06 2.3E-10 75.2 7.5 99 42-194 112-214 (277)
195 2b25_A Hypothetical protein; s 98.0 5.8E-06 2E-10 78.0 7.0 100 42-194 105-220 (336)
196 2y1w_A Histone-arginine methyl 98.0 4E-06 1.4E-10 79.9 5.8 102 42-193 50-155 (348)
197 2xyq_A Putative 2'-O-methyl tr 98.0 2.2E-05 7.7E-10 73.5 10.7 107 41-195 62-173 (290)
198 3tr6_A O-methyltransferase; ce 98.0 2.7E-06 9.1E-11 75.0 4.0 103 42-195 64-176 (225)
199 1mjf_A Spermidine synthase; sp 98.0 5.9E-06 2E-10 76.5 6.4 109 41-195 74-195 (281)
200 3r3h_A O-methyltransferase, SA 98.0 2.1E-06 7E-11 77.8 3.2 103 42-195 60-172 (242)
201 1ne2_A Hypothetical protein TA 98.0 2E-05 6.7E-10 68.2 9.3 75 42-140 51-125 (200)
202 3tma_A Methyltransferase; thum 98.0 7.2E-06 2.5E-10 78.1 7.0 113 42-194 203-318 (354)
203 2p41_A Type II methyltransfera 98.0 4.7E-06 1.6E-10 78.4 5.3 106 42-197 82-195 (305)
204 3duw_A OMT, O-methyltransferas 98.0 2.7E-06 9.2E-11 74.9 3.4 106 42-195 58-169 (223)
205 4hc4_A Protein arginine N-meth 98.0 1.4E-05 4.8E-10 77.5 8.4 100 44-192 85-188 (376)
206 1u2z_A Histone-lysine N-methyl 98.0 4.2E-06 1.5E-10 82.6 4.8 103 41-192 241-358 (433)
207 2i7c_A Spermidine synthase; tr 98.0 6.9E-06 2.4E-10 76.2 5.9 108 41-194 77-193 (283)
208 1sui_A Caffeoyl-COA O-methyltr 98.0 3.7E-06 1.3E-10 76.3 3.9 101 42-193 79-190 (247)
209 1xj5_A Spermidine synthase 1; 98.0 5.3E-06 1.8E-10 79.1 4.9 108 41-193 119-235 (334)
210 2o07_A Spermidine synthase; st 97.9 8.7E-06 3E-10 76.5 6.0 110 41-195 94-211 (304)
211 2b2c_A Spermidine synthase; be 97.9 9.1E-06 3.1E-10 76.8 6.0 108 41-193 107-222 (314)
212 3ajd_A Putative methyltransfer 97.9 1.1E-05 3.9E-10 74.1 6.5 122 42-196 83-214 (274)
213 1iy9_A Spermidine synthase; ro 97.9 1.9E-05 6.6E-10 72.9 8.1 110 41-194 74-190 (275)
214 1zq9_A Probable dimethyladenos 97.9 2E-06 6.8E-11 79.9 1.3 99 9-139 5-107 (285)
215 2yxl_A PH0851 protein, 450AA l 97.9 1.4E-05 4.9E-10 78.8 7.5 127 42-197 259-393 (450)
216 3c3y_A Pfomt, O-methyltransfer 97.9 4.7E-06 1.6E-10 75.0 3.1 105 42-194 70-182 (237)
217 1sqg_A SUN protein, FMU protei 97.9 2.4E-05 8.2E-10 76.7 8.2 125 42-196 246-377 (429)
218 2pt6_A Spermidine synthase; tr 97.9 1.7E-05 5.6E-10 75.1 6.5 107 41-194 115-231 (321)
219 2yvl_A TRMI protein, hypotheti 97.9 3E-05 1E-09 68.9 7.7 98 42-195 91-192 (248)
220 2frx_A Hypothetical protein YE 97.8 2.8E-05 9.7E-10 77.6 7.6 126 42-196 117-249 (479)
221 2avd_A Catechol-O-methyltransf 97.8 9.3E-06 3.2E-10 71.6 3.6 102 42-194 69-180 (229)
222 3cbg_A O-methyltransferase; cy 97.8 2.1E-05 7.3E-10 70.2 5.7 106 42-195 72-184 (232)
223 3c3p_A Methyltransferase; NP_9 97.8 8.6E-06 3E-10 71.2 2.8 101 42-194 56-161 (210)
224 2ih2_A Modification methylase 97.8 0.00012 4.2E-09 70.5 11.1 122 42-195 39-166 (421)
225 3m6w_A RRNA methylase; rRNA me 97.8 1.2E-05 4.2E-10 80.0 4.0 126 42-196 101-232 (464)
226 2igt_A SAM dependent methyltra 97.7 3.7E-05 1.3E-09 73.1 6.8 113 42-196 153-275 (332)
227 2cmg_A Spermidine synthase; tr 97.7 3.8E-05 1.3E-09 70.6 6.7 94 41-193 71-171 (262)
228 1nv8_A HEMK protein; class I a 97.7 5.1E-05 1.7E-09 70.4 7.0 117 43-193 124-249 (284)
229 3a27_A TYW2, uncharacterized p 97.7 8.7E-05 3E-09 68.2 8.0 103 42-198 119-224 (272)
230 3b3j_A Histone-arginine methyl 97.6 7.2E-05 2.5E-09 74.6 6.9 101 42-193 158-263 (480)
231 3lcv_B Sisomicin-gentamicin re 97.6 2.4E-05 8.2E-10 72.5 2.5 84 41-143 131-216 (281)
232 3frh_A 16S rRNA methylase; met 97.6 9.7E-05 3.3E-09 67.6 6.4 96 25-144 90-187 (253)
233 3kr9_A SAM-dependent methyltra 97.6 0.00034 1.2E-08 63.1 9.9 126 41-258 14-143 (225)
234 3m4x_A NOL1/NOP2/SUN family pr 97.5 6.8E-05 2.3E-09 74.4 5.5 126 42-196 105-237 (456)
235 1yub_A Ermam, rRNA methyltrans 97.5 6.5E-06 2.2E-10 74.4 -2.2 113 41-194 28-146 (245)
236 3lec_A NADB-rossmann superfami 97.5 0.001 3.5E-08 60.1 12.3 126 41-258 20-149 (230)
237 1wy7_A Hypothetical protein PH 97.4 0.00045 1.5E-08 59.7 8.4 77 42-140 49-127 (207)
238 2f8l_A Hypothetical protein LM 97.4 0.00037 1.2E-08 66.0 8.2 125 42-195 130-258 (344)
239 4dmg_A Putative uncharacterize 97.4 0.00039 1.3E-08 67.6 8.4 112 43-196 215-329 (393)
240 2b78_A Hypothetical protein SM 97.3 0.00018 6E-09 69.6 4.4 115 43-195 213-333 (385)
241 1wxx_A TT1595, hypothetical pr 97.2 0.0003 1E-08 67.7 5.9 112 42-195 209-327 (382)
242 3gru_A Dimethyladenosine trans 97.2 0.00014 4.7E-09 68.2 2.6 78 42-139 50-128 (295)
243 1qam_A ERMC' methyltransferase 97.1 0.00032 1.1E-08 63.4 4.5 99 8-137 6-106 (244)
244 3tm4_A TRNA (guanine N2-)-meth 97.1 0.0005 1.7E-08 66.0 6.1 98 10-136 196-297 (373)
245 3k6r_A Putative transferase PH 97.1 0.002 6.9E-08 59.8 9.9 101 42-197 125-229 (278)
246 2as0_A Hypothetical protein PH 97.1 0.00037 1.3E-08 67.3 4.8 114 42-196 217-338 (396)
247 2qm3_A Predicted methyltransfe 97.1 0.0011 3.9E-08 63.4 8.2 103 42-195 172-280 (373)
248 3gnl_A Uncharacterized protein 97.1 0.0013 4.6E-08 59.9 8.1 102 41-193 20-125 (244)
249 2h1r_A Dimethyladenosine trans 97.0 0.0003 1E-08 65.6 3.3 100 8-139 18-120 (299)
250 3c0k_A UPF0064 protein YCCW; P 97.0 0.0007 2.4E-08 65.4 5.9 112 43-195 221-341 (396)
251 2okc_A Type I restriction enzy 97.0 0.00089 3.1E-08 65.7 6.5 129 42-194 171-308 (445)
252 3evf_A RNA-directed RNA polyme 97.0 0.0011 3.7E-08 61.5 6.3 108 42-196 74-187 (277)
253 1uwv_A 23S rRNA (uracil-5-)-me 96.9 0.0046 1.6E-07 60.5 11.1 73 42-131 286-362 (433)
254 3fut_A Dimethyladenosine trans 96.9 0.00038 1.3E-08 64.4 3.1 73 45-137 49-122 (271)
255 2jjq_A Uncharacterized RNA met 96.9 0.0015 5.3E-08 64.0 7.3 67 43-131 291-359 (425)
256 4azs_A Methyltransferase WBDD; 96.9 0.00068 2.3E-08 68.7 4.6 80 41-140 65-149 (569)
257 3v97_A Ribosomal RNA large sub 96.9 0.0019 6.7E-08 67.2 8.1 115 43-196 540-660 (703)
258 2yx1_A Hypothetical protein MJ 96.7 0.0014 4.8E-08 61.9 5.3 97 42-197 195-295 (336)
259 4gqb_A Protein arginine N-meth 96.7 0.0021 7.2E-08 66.2 6.4 129 11-190 332-464 (637)
260 3tqs_A Ribosomal RNA small sub 96.7 0.00096 3.3E-08 61.0 3.5 43 42-101 29-71 (255)
261 2qfm_A Spermine synthase; sper 96.5 0.0025 8.5E-08 61.4 5.6 114 41-195 187-316 (364)
262 3khk_A Type I restriction-modi 96.5 0.017 5.8E-07 58.4 11.7 141 41-194 243-396 (544)
263 3gcz_A Polyprotein; flavivirus 96.2 0.011 3.6E-07 55.0 7.8 107 42-195 90-203 (282)
264 2b9e_A NOL1/NOP2/SUN domain fa 96.1 0.0097 3.3E-07 55.8 7.2 73 42-131 102-180 (309)
265 3uzu_A Ribosomal RNA small sub 96.1 0.004 1.4E-07 57.6 4.4 45 42-100 42-87 (279)
266 3s1s_A Restriction endonucleas 96.0 0.073 2.5E-06 56.2 13.8 123 42-195 321-467 (878)
267 1qyr_A KSGA, high level kasuga 95.9 0.009 3.1E-07 54.3 5.6 80 42-141 21-114 (252)
268 3ftd_A Dimethyladenosine trans 95.9 0.0023 7.8E-08 58.2 1.6 43 42-100 31-73 (249)
269 2dul_A N(2),N(2)-dimethylguano 95.9 0.011 3.7E-07 57.0 6.3 43 43-100 48-90 (378)
270 2ar0_A M.ecoki, type I restric 95.9 0.012 3.9E-07 59.5 6.7 127 42-194 169-313 (541)
271 3lkd_A Type I restriction-modi 95.8 0.053 1.8E-06 54.7 11.5 125 42-195 221-360 (542)
272 3ua3_A Protein arginine N-meth 95.6 0.0093 3.2E-07 62.0 5.0 107 11-132 387-502 (745)
273 3eld_A Methyltransferase; flav 95.5 0.059 2E-06 50.3 9.5 111 41-195 80-193 (300)
274 3k0b_A Predicted N6-adenine-sp 95.5 0.011 3.8E-07 57.2 4.8 87 42-132 201-314 (393)
275 3bt7_A TRNA (uracil-5-)-methyl 95.5 0.017 5.9E-07 55.0 6.0 40 44-100 215-254 (369)
276 3axs_A Probable N(2),N(2)-dime 95.5 0.024 8.1E-07 55.0 7.0 130 5-193 23-158 (392)
277 3ldg_A Putative uncharacterize 95.4 0.031 1.1E-06 54.0 7.5 87 42-132 194-307 (384)
278 3ldu_A Putative methylase; str 94.9 0.039 1.3E-06 53.1 6.7 87 42-132 195-308 (385)
279 1m6y_A S-adenosyl-methyltransf 94.3 0.032 1.1E-06 52.1 4.3 73 42-132 26-105 (301)
280 3v97_A Ribosomal RNA large sub 92.2 0.49 1.7E-05 49.1 9.7 125 42-194 190-348 (703)
281 3lkz_A Non-structural protein 91.5 0.94 3.2E-05 42.4 9.6 110 43-196 95-207 (321)
282 2wk1_A NOVP; transferase, O-me 90.5 0.73 2.5E-05 42.5 7.9 22 41-62 105-126 (282)
283 2k4m_A TR8_protein, UPF0146 pr 89.8 0.44 1.5E-05 40.1 5.3 35 42-92 35-70 (153)
284 2px2_A Genome polyprotein [con 89.5 0.82 2.8E-05 41.9 7.3 112 41-195 72-185 (269)
285 4auk_A Ribosomal RNA large sub 89.4 0.47 1.6E-05 45.6 5.8 72 42-137 211-282 (375)
286 3ll7_A Putative methyltransfer 88.8 0.18 6.3E-06 49.1 2.6 70 43-132 94-170 (410)
287 3p8z_A Mtase, non-structural p 86.6 0.93 3.2E-05 41.2 5.6 73 42-133 78-152 (267)
288 3r24_A NSP16, 2'-O-methyl tran 85.9 1.1 3.9E-05 41.9 5.9 104 40-194 107-218 (344)
289 3o4f_A Spermidine synthase; am 85.2 3.4 0.00012 38.3 8.9 112 40-195 81-200 (294)
290 2qy6_A UPF0209 protein YFCK; s 84.6 0.43 1.5E-05 43.3 2.4 24 41-64 59-82 (257)
291 2zig_A TTHA0409, putative modi 84.4 1.2 4.1E-05 40.8 5.4 27 168-194 72-98 (297)
292 3ufb_A Type I restriction-modi 81.5 1.1 3.8E-05 44.9 4.2 49 42-94 217-267 (530)
293 4fzv_A Putative methyltransfer 79.3 5.8 0.0002 37.6 8.3 126 42-197 148-288 (359)
294 2r6z_A UPF0341 protein in RSP 78.2 0.63 2.2E-05 42.1 1.1 75 43-137 84-173 (258)
295 3c6k_A Spermine synthase; sper 76.8 4 0.00014 39.2 6.4 116 41-193 204-331 (381)
296 1wg8_A Predicted S-adenosylmet 73.9 5.4 0.00018 36.8 6.1 74 43-137 23-104 (285)
297 2zig_A TTHA0409, putative modi 71.2 6.4 0.00022 35.8 6.1 42 42-100 235-276 (297)
298 2vz8_A Fatty acid synthase; tr 71.1 2.2 7.4E-05 50.5 3.4 106 42-193 1240-1348(2512)
299 2oyr_A UPF0341 protein YHIQ; a 57.3 3.2 0.00011 37.6 1.1 32 44-92 90-121 (258)
300 3cvo_A Methyltransferase-like 56.1 23 0.00079 30.7 6.4 13 179-191 140-152 (202)
301 3vyw_A MNMC2; tRNA wobble urid 54.3 7.7 0.00026 36.1 3.2 24 41-64 95-118 (308)
302 3eb9_A 6-phosphogluconolactona 42.0 78 0.0027 28.3 7.9 47 12-67 12-58 (266)
303 1i4w_A Mitochondrial replicati 41.6 36 0.0012 32.1 5.7 43 43-90 59-115 (353)
304 3pvc_A TRNA 5-methylaminomethy 39.7 14 0.00046 37.7 2.6 24 41-64 57-80 (689)
305 1wg8_A Predicted S-adenosylmet 33.6 20 0.00069 33.0 2.4 26 170-195 210-235 (285)
306 1g60_A Adenine-specific methyl 32.4 31 0.001 30.5 3.5 36 42-94 212-247 (260)
307 3ps9_A TRNA 5-methylaminomethy 31.8 21 0.00073 36.1 2.5 24 41-64 65-88 (676)
308 3tka_A Ribosomal RNA small sub 31.7 22 0.00076 33.6 2.4 26 170-195 251-276 (347)
309 1rjd_A PPM1P, carboxy methyl t 30.5 3.2E+02 0.011 25.0 15.4 36 42-92 97-132 (334)
310 3tka_A Ribosomal RNA small sub 28.4 39 0.0013 31.9 3.5 58 27-102 45-102 (347)
311 3qua_A Putative uncharacterize 28.0 29 0.001 30.0 2.4 37 210-246 158-198 (199)
312 1m6y_A S-adenosyl-methyltransf 28.0 19 0.00067 33.0 1.3 26 170-195 222-247 (301)
313 3sbx_A Putative uncharacterize 27.9 39 0.0013 29.0 3.1 36 210-245 149-188 (189)
314 2uyo_A Hypothetical protein ML 26.5 3.6E+02 0.012 24.4 13.2 71 173-253 198-274 (310)
315 1t35_A Hypothetical protein YV 23.6 57 0.002 27.8 3.4 37 210-246 138-178 (191)
316 4d8b_A Streptopain; papain fol 23.5 1E+02 0.0034 27.8 5.2 78 14-112 109-189 (261)
317 2c7p_A Modification methylase 22.8 1.2E+02 0.0042 27.8 5.8 45 42-102 10-54 (327)
318 2v1n_A KIN17, protein KIN homo 20.8 46 0.0016 26.2 2.0 67 156-254 11-83 (111)
No 1
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=100.00 E-value=1.5e-86 Score=644.12 Aligned_cols=324 Identities=35% Similarity=0.592 Sum_probs=295.5
Q ss_pred CCCCCCCcchHHHhHHHHHHHHHhHhhHHHHHhhcccCC-CCCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCC-C
Q 037735 1 MVGGDGAHSYASNSAYQSIQVYILRYDPRTAVTDLGTNA-VPNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECP-S 78 (329)
Q Consensus 1 m~gG~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~i~~~~-~~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~-~ 78 (329)
|+||+|++||++||.+|++++..++|++++||.++.... .+++++|||||||+|+||+.+++.||++|+++|.+.+. +
T Consensus 9 m~gg~G~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~ 88 (359)
T 1m6e_X 9 MKGGAGENSYAMNSFIQRQVISITKPITEAAITALYSGDTVTTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGREN 88 (359)
T ss_dssp CCCCTTSTTTTSSCHHHHHHHHHTHHHHHHHHHHHHSSSSSSSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSS
T ss_pred cCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCC
Confidence 999999999999999999999999999999999876543 56789999999999999999999999999999977654 6
Q ss_pred CccceEEecCCCcchHHhhhhcCCCC----cceeeeccccccccccCCCCceeEEEeccceecccCCCCC-CCCccceee
Q 037735 79 AIEFQVFFNDHSDNDFNTLFKSLPQS----RSYYAAGVPGSFYSSLFPKSSLHFVHSSYTLHWLSKVPKV-DGVEGSIQT 153 (329)
Q Consensus 79 ~pe~~v~~nDLp~ndfn~lf~~l~~~----~~~f~~gvpgsFy~~lfp~~s~dl~~Ss~alhWLs~~p~~-~~n~g~i~~ 153 (329)
.||+|||+||||.||||++|++|+.. ++||++|||||||+||||++|+|++||++||||||++|+. .-|||+||+
T Consensus 89 ~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~ 168 (359)
T 1m6e_X 89 SPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYM 168 (359)
T ss_dssp CCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSS
T ss_pred CCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEe
Confidence 88999999999999999999999852 5799999999999999999999999999999999999988 349999999
Q ss_pred cC-CcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCCCCcccCCcccchHHHHHHHHHHHHhcCCcCCCc-
Q 037735 154 RR-FVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPDGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEK- 231 (329)
Q Consensus 154 ~~-~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~- 231 (329)
++ +|++|.+||++||++||..||++|++||+|||+|+++++|+++..+.++ +.+.+|+.|.++|++|+.+|+|++++
T Consensus 169 ~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~gr~~~~~~~~-~~~~~~~~l~~al~~mv~eGli~~ek~ 247 (359)
T 1m6e_X 169 ANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRSEDRAST-ECCLIWQLLAMALNQMVSEGLIEEEKM 247 (359)
T ss_dssp CSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEECSSSSSSST-TTSTTTHHHHHHHHHHHHTTCSCCSTT
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEecCCCCCcccc-chHHHHHHHHHHHHHHHHccccchhhh
Confidence 86 5677999999999999999999999999999999999999999876644 46678999999999999999999987
Q ss_pred ------ccCCCHHHHHHHHHhCCceEEeEEEEeecCcccc----------cccHHHHhhhHhhhhhhHHhhhcChHHHHH
Q 037735 232 ------MYNPTPKELEGIIQRNGNFTIERMEKMTNPKQQV----------LCSASDLAVAMRAVYEGLVKEHFGDEFVDK 295 (329)
Q Consensus 232 ------~y~ps~eE~~~~i~~~g~f~i~~~e~~~~~~~~~----------~~~~~~~~~~iRa~~e~~~~~~~g~~~~d~ 295 (329)
+|+||++|++++|+++|+|+|+++|.++..|... ...++.+++++||+.+|++.+|||++++|+
T Consensus 248 d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~e~~~~~~~~~~~~~d~~~~~~~~g~~~a~~~Ra~~e~ll~~hfG~~i~d~ 327 (359)
T 1m6e_X 248 DKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWSSCTKDGDGGGSVEEEGYNVARCMRAVAEPLLLDHFGEAIIED 327 (359)
T ss_dssp GGGCCCCBCCCSHHHHHHHHHTTTBCCEEEEEEEEETTCCSSCTTCCSSTTTTTTHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred hccCCCccCCCHHHHHHHHHHcCCceEEEEEEEeeccCcccchhhhhhhhhHhHhHhhhhhhhhcchhhHHhccHHHHHH
Confidence 9999999999999999999999999887665421 124678999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhhhcCCCceEEEEEEEeC
Q 037735 296 IFNHFATKAEENISIIGQRVQDSMMDLFILLKRI 329 (329)
Q Consensus 296 ~f~ry~~~~~~~~~~~~~~~~~~~~~~~~~L~r~ 329 (329)
+|+||++++++++.. ...++++++++|+|+
T Consensus 328 lf~ry~~~~~~~~~~----~~~~~~~~~~~L~k~ 357 (359)
T 1m6e_X 328 VFHRYKLLIIERMSK----EKTKFINVIVSLIRK 357 (359)
T ss_dssp HHHHHHHHHHHHHHS----SCCEEEEEEEEEEBC
T ss_pred HHHHHHHHHHHHHhh----CCCceEEEEEEEEeC
Confidence 999999999998873 456689999999996
No 2
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=100.00 E-value=4.4e-84 Score=631.43 Aligned_cols=317 Identities=32% Similarity=0.574 Sum_probs=277.0
Q ss_pred CCCCCCCcchHHHhHHHHHHHHHhHhhHHHHHhhcccCCCCC---ceEEEeeeCCCCcccHHHHHHHHHHHHHHhhh--c
Q 037735 1 MVGGDGAHSYASNSAYQSIQVYILRYDPRTAVTDLGTNAVPN---TFRIADFGCSTGPNTFIAVQNIIDSVELKFQH--E 75 (329)
Q Consensus 1 m~gG~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~i~~~~~~~---~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~--~ 75 (329)
|+||+|++||++||. |++++..++|++++||+.+.....++ +++|||||||+|+||+.+++.||++|+++|.+ .
T Consensus 9 M~gg~G~~sY~~nS~-Q~~~~~~~~~~~~~ai~~l~~~~~~~~~~~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~ 87 (384)
T 2efj_A 9 MNGGEGDTSYAKNSS-YNLFLIRVKPVLEQCIQELLRANLPNINKCFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKN 87 (384)
T ss_dssp CCC----CCHHHHCC-TTTTHHHHHHHHHHHHHHHHHTTCTTTTTEEEEEEETCCSSHHHHHHHHHHHHHHTCC------
T ss_pred cCCCCChhhHHHhHH-HHHHHHHHHHHHHHHHHHhhhcccCCcCCceEEEecCCCCCchHHHHHHHHHHHHHHHhhhccc
Confidence 999999999999999 99999999999999999776543344 89999999999999999999999999999865 3
Q ss_pred CCCCccceEEecCCCcchHHhhhhcCCC------------CcceeeeccccccccccCCCCceeEEEeccceecccCCCC
Q 037735 76 CPSAIEFQVFFNDHSDNDFNTLFKSLPQ------------SRSYYAAGVPGSFYSSLFPKSSLHFVHSSYTLHWLSKVPK 143 (329)
Q Consensus 76 ~~~~pe~~v~~nDLp~ndfn~lf~~l~~------------~~~~f~~gvpgsFy~~lfp~~s~dl~~Ss~alhWLs~~p~ 143 (329)
+.+.||+|||+||||.||||+||++||. .++||++|||||||+||||++|+|++||++||||||++|+
T Consensus 88 ~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~ 167 (384)
T 2efj_A 88 ELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPS 167 (384)
T ss_dssp ----CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCC
T ss_pred CCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceEEEecchhhhhccCCCCceEEEEecceeeecCCCch
Confidence 4457899999999999999999999974 2479999999999999999999999999999999999997
Q ss_pred C--C-----CCccceeecC-CcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCCC--CcccCCcccchHHH
Q 037735 144 V--D-----GVEGSIQTRR-FVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPDG--IPLVNNAAGSFYNT 213 (329)
Q Consensus 144 ~--~-----~n~g~i~~~~-~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~~--~~~~~~~~~~~~~~ 213 (329)
. + ||||+||+++ +||+|.++|++||++||..||++|++||+|||+|+++++|+++. .+.+ .++
T Consensus 168 ~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra~eL~pGG~mvl~~~gr~~~~~~~~~-------~~~ 240 (384)
T 2efj_A 168 GLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHSEELISRGRMLLTFICKEDEFDHPNS-------MDL 240 (384)
T ss_dssp C------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCTTTCCCCH-------HHH
T ss_pred hhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCCcccCccc-------HHH
Confidence 7 3 8999999985 67889999999999999999999999999999999999999987 5432 138
Q ss_pred HHHHHHHHHhcCCcCCCc-------ccCCCHHHHHHHHHhCCceEEeEEEEeecCcccc----c---------------c
Q 037735 214 FGSCLVELTKMGILSKEK-------MYNPTPKELEGIIQRNGNFTIERMEKMTNPKQQV----L---------------C 267 (329)
Q Consensus 214 l~~a~~~l~~eG~i~~~~-------~y~ps~eE~~~~i~~~g~f~i~~~e~~~~~~~~~----~---------------~ 267 (329)
+.++|++|+.+|+|++++ +|+||++|++++|+++|+|+|.++|.++..|... . .
T Consensus 241 l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~le~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 320 (384)
T 2efj_A 241 LEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYLETFNAPYDAGFSIDDDYQGRSHSPVSCDEHA 320 (384)
T ss_dssp HHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEEEEEEEETTTTCCC---------CCSHHHHHH
T ss_pred HHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEEEEEEeecccccccccccccccccccccchHhH
Confidence 999999999999999996 9999999999999999999999999987665421 1 1
Q ss_pred cHHHHhhhHhhhhhhHHhhhcChHHHHHHHHHHHHHHHHhhhhhhhhcCCCceEEEEEEEeC
Q 037735 268 SASDLAVAMRAVYEGLVKEHFGDEFVDKIFNHFATKAEENISIIGQRVQDSMMDLFILLKRI 329 (329)
Q Consensus 268 ~~~~~~~~iRa~~e~~~~~~~g~~~~d~~f~ry~~~~~~~~~~~~~~~~~~~~~~~~~L~r~ 329 (329)
.++.+++++||+++|++.+|||++++|++|+||+++++++++. ...++++++++|+|+
T Consensus 321 ~g~~~a~~iRa~~epll~~hfG~~i~d~lF~ry~~~~~~~~~~----~~~~~~~~~~~L~k~ 378 (384)
T 2efj_A 321 RAAHVASVVRSIYEPILASHFGEAILPDLSHRIAKNAAKVLRS----GKGFYDSVIISLAKK 378 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCSTTHHHHHHHHHHHHHHHHHH----TCCEEEEEEEEEEEC
T ss_pred hHHHhhhhhHHhhhhhhHHhccHHHHHHHHHHHHHHHHHHHhh----CCCceEEEEEEEEEc
Confidence 3578999999999999999999999999999999999998874 356789999999996
No 3
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=100.00 E-value=2.7e-83 Score=624.82 Aligned_cols=325 Identities=31% Similarity=0.553 Sum_probs=278.2
Q ss_pred CCCCCCCcchHHHhHHHHHHHHHhHhhHHHHHhhcccCC--CCCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCC
Q 037735 1 MVGGDGAHSYASNSAYQSIQVYILRYDPRTAVTDLGTNA--VPNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPS 78 (329)
Q Consensus 1 m~gG~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~i~~~~--~~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~ 78 (329)
|+||+|+.||++||.+|++++..++|+++++|+.+.... .+++++|||||||+|+||+.+++.||++|+++|.+.+.+
T Consensus 9 m~gg~g~~sY~~nS~~Q~~~~~~~~~~~~~ai~~l~~~~~~~~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~ 88 (374)
T 3b5i_A 9 MKGGKGQDSYANNSLAQAMHARSMLHLLEETLENVHLNSSASPPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGID 88 (374)
T ss_dssp -----------------CTTHHHHHHHHHHHHHTSCCCCSSSCCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCCCcchHHHhhHHHHHHHHHHHHHHHHHHHHhhccccCCCCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCC
Confidence 999999999999999999999999999999999876543 356899999999999999999999999999999877767
Q ss_pred CccceEEecCCCcchHHhhhhcCCCC---------------cceeeeccccccccccCCCCceeEEEeccceecccCCCC
Q 037735 79 AIEFQVFFNDHSDNDFNTLFKSLPQS---------------RSYYAAGVPGSFYSSLFPKSSLHFVHSSYTLHWLSKVPK 143 (329)
Q Consensus 79 ~pe~~v~~nDLp~ndfn~lf~~l~~~---------------~~~f~~gvpgsFy~~lfp~~s~dl~~Ss~alhWLs~~p~ 143 (329)
+||+||++||||.||||+||++|+.. ++||++|||||||+||||++|+|+|||++||||||++|+
T Consensus 89 ~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~ 168 (374)
T 3b5i_A 89 PPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPE 168 (374)
T ss_dssp CCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCG
T ss_pred CCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCceEEEecChhhhcccCCCcceEEEEecceeeeeccCch
Confidence 89999999999999999999999863 359999999999999999999999999999999999997
Q ss_pred C--C-----CCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCCCCcccCCcccchH-HHHH
Q 037735 144 V--D-----GVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPDGIPLVNNAAGSFY-NTFG 215 (329)
Q Consensus 144 ~--~-----~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~~~~~~~~~~~~~~-~~l~ 215 (329)
. + ||||+||+++++|+|.+||++||++||..||++|++||+|||+|+++++|+++..+.++.+.+.+| +.|.
T Consensus 169 ~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~ 248 (374)
T 3b5i_A 169 SVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAAEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQ 248 (374)
T ss_dssp GGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHH
T ss_pred hhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEecCCCCccccccchhhHHHHHHH
Confidence 6 3 899999999888889999999999999999999999999999999999999998776666667788 9999
Q ss_pred HHHHHHHhcCCcCCCc-------ccCCCHHHHHHHHHhCCceEEeEEEEeecCcc---cc----cccHHHHhhhHhhhhh
Q 037735 216 SCLVELTKMGILSKEK-------MYNPTPKELEGIIQRNGNFTIERMEKMTNPKQ---QV----LCSASDLAVAMRAVYE 281 (329)
Q Consensus 216 ~a~~~l~~eG~i~~~~-------~y~ps~eE~~~~i~~~g~f~i~~~e~~~~~~~---~~----~~~~~~~~~~iRa~~e 281 (329)
++|++|+.+|+|++++ +|+||++|++++|+++|+|+|++++.++.+|. +. ...++.+++++||+.+
T Consensus 249 ~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~~F~I~~le~~~~~~~~~~~~~~~~~~~g~~~a~~~Ra~~e 328 (374)
T 3b5i_A 249 DAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFAIDKLVVYKGGSPLVVNEPDDASEVGRAFASSCRSVAG 328 (374)
T ss_dssp HHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHCSEEEEEEEEEECCCCCCCSSTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCcchhhcccCCccccCCCHHHHHHHHHhcCCcEEEEEEEEeecCCccccccchhHHHHHHHHHHHHHhcc
Confidence 9999999999999985 99999999999999888999999999876542 11 1136889999999999
Q ss_pred hHHhhhcChHHHHHHHHHHHHHHHHhhhhhhhhcCCC--ceEEEEEEE
Q 037735 282 GLVKEHFGDEFVDKIFNHFATKAEENISIIGQRVQDS--MMDLFILLK 327 (329)
Q Consensus 282 ~~~~~~~g~~~~d~~f~ry~~~~~~~~~~~~~~~~~~--~~~~~~~L~ 327 (329)
|++.+|||++++|++|+||+++++++++.+ .+..+ .++++++|+
T Consensus 329 ~ll~~hfg~~i~d~lf~ry~~~~~~~~~~~--~~~~~~~~~~~~~~l~ 374 (374)
T 3b5i_A 329 VLVEAHIGEELSNKLFSRVESRATSHAKDV--LVNLQFFHIVASLSFT 374 (374)
T ss_dssp HHHHTTSCHHHHHHHHHHHHHHHHHTCHHH--HTTCCCEEEEEEEEEC
T ss_pred chhHhhccHHHHHHHHHHHHHHHHHhHHHh--hhccccceEEEEEEeC
Confidence 999999999999999999999999999876 34555 688888885
No 4
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.70 E-value=1.3e-16 Score=144.47 Aligned_cols=223 Identities=13% Similarity=0.169 Sum_probs=150.4
Q ss_pred CcchHHHhHHHHHHHHHhHhhHHHHHhhcccCCCCCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEe
Q 037735 7 AHSYASNSAYQSIQVYILRYDPRTAVTDLGTNAVPNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFF 86 (329)
Q Consensus 7 ~~sY~~nS~~Q~~~~~~~~~~l~~ai~~i~~~~~~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~ 86 (329)
+..|++.+..|.+.+..++..+. ..+..+|+|+|||+|..+..+.... |..+++.
T Consensus 8 ~~~y~~~~~~~~~~~~~l~~~~~----------~~~~~~vLdiG~G~G~~~~~l~~~~---------------~~~~v~~ 62 (259)
T 2p35_A 8 AQQYLKFEDERTRPARDLLAQVP----------LERVLNGYDLGCGPGNSTELLTDRY---------------GVNVITG 62 (259)
T ss_dssp CGGGBCCCCGGGHHHHHHHTTCC----------CSCCSSEEEETCTTTHHHHHHHHHH---------------CTTSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC----------CCCCCEEEEecCcCCHHHHHHHHhC---------------CCCEEEE
Confidence 46788888888877765544332 2345799999999999998887521 2358999
Q ss_pred cCCCcchHHhhhhcCCCCcceeeeccccccccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHH
Q 037735 87 NDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAA 166 (329)
Q Consensus 87 nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~ 166 (329)
.|+...+....-+..+. ..|..+ ++.+-. |++++|+|+|+.++||+.+
T Consensus 63 ~D~s~~~~~~a~~~~~~--~~~~~~---d~~~~~-~~~~fD~v~~~~~l~~~~~-------------------------- 110 (259)
T 2p35_A 63 IDSDDDMLEKAADRLPN--TNFGKA---DLATWK-PAQKADLLYANAVFQWVPD-------------------------- 110 (259)
T ss_dssp EESCHHHHHHHHHHSTT--SEEEEC---CTTTCC-CSSCEEEEEEESCGGGSTT--------------------------
T ss_pred EECCHHHHHHHHHhCCC--cEEEEC---ChhhcC-ccCCcCEEEEeCchhhCCC--------------------------
Confidence 99988777666554332 234443 554433 8899999999999999743
Q ss_pred HHhhcHHHHHHHHHHHhccCceEEEEecccCCCCcccCCcccchHHHHHHHHHHHHhcCCc----CC---CcccCCCHHH
Q 037735 167 QFNNDFQTFLNTRAQELVPGGLAALVMFSVPDGIPLVNNAAGSFYNTFGSCLVELTKMGIL----SK---EKMYNPTPKE 239 (329)
Q Consensus 167 q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i----~~---~~~y~ps~eE 239 (329)
...+|+..++.|+|||+|++++++..+. + .. ..+.++...+.. .. ....+++.++
T Consensus 111 -----~~~~l~~~~~~L~pgG~l~~~~~~~~~~-~--------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (259)
T 2p35_A 111 -----HLAVLSQLMDQLESGGVLAVQMPDNLQE-P--------TH----IAMHETADGGPWKDAFSGGGLRRKPLPPPSD 172 (259)
T ss_dssp -----HHHHHHHHGGGEEEEEEEEEEEECCTTS-H--------HH----HHHHHHHHHSTTGGGC-------CCCCCHHH
T ss_pred -----HHHHHHHHHHhcCCCeEEEEEeCCCCCc-H--------HH----HHHHHHhcCcchHHHhccccccccCCCCHHH
Confidence 3478999999999999999999764321 0 11 112222221100 00 0156789999
Q ss_pred HHHHHHhCCceEEeEEEEeecCcccccccHHHHhhhHhhhhhhHHhhhcChHHHHHHHHHHHHHHHHhh
Q 037735 240 LEGIIQRNGNFTIERMEKMTNPKQQVLCSASDLAVAMRAVYEGLVKEHFGDEFVDKIFNHFATKAEENI 308 (329)
Q Consensus 240 ~~~~i~~~g~f~i~~~e~~~~~~~~~~~~~~~~~~~iRa~~e~~~~~~~g~~~~d~~f~ry~~~~~~~~ 308 (329)
+.+++++. +|++...+......+. +++.+..++++++...+...++++..++|.+++.+.+.++.
T Consensus 173 ~~~~l~~a-Gf~v~~~~~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (259)
T 2p35_A 173 YFNALSPK-SSRVDVWHTVYNHPMK---DADSIVEWVKGTGLRPYLAAAGEENREAFLADYTRRIAAAY 237 (259)
T ss_dssp HHHHHGGG-EEEEEEEEEEEEEEES---CHHHHHHHHTTTTTTHHHHTTCGGGHHHHHHHHHHHHHHHS
T ss_pred HHHHHHhc-CCceEEEEEEeeeccC---CchHHhhhhhcCcchHHHHhCCHHHHHHHHHHHHHHHHHhC
Confidence 99999988 5987655543211222 47888899998654333346888888999888988887654
No 5
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.70 E-value=3e-16 Score=144.75 Aligned_cols=222 Identities=16% Similarity=0.168 Sum_probs=145.2
Q ss_pred CcchHHHhHHHHHHHHHhHhhHHHHHhhcccCCCCCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEe
Q 037735 7 AHSYASNSAYQSIQVYILRYDPRTAVTDLGTNAVPNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFF 86 (329)
Q Consensus 7 ~~sY~~nS~~Q~~~~~~~~~~l~~ai~~i~~~~~~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~ 86 (329)
+..|++++..|......+...+. ..+..+|+|+|||+|..+..+.. +..+|+.
T Consensus 32 a~~y~~~~~~~~~~~~~l~~~l~----------~~~~~~vLDiGcG~G~~~~~l~~-----------------~~~~v~g 84 (279)
T 3ccf_A 32 ATLYQDKHSFVWQYGEDLLQLLN----------PQPGEFILDLGCGTGQLTEKIAQ-----------------SGAEVLG 84 (279)
T ss_dssp ---------CCSSSCCHHHHHHC----------CCTTCEEEEETCTTSHHHHHHHH-----------------TTCEEEE
T ss_pred HHHHhhcchHHHHHHHHHHHHhC----------CCCCCEEEEecCCCCHHHHHHHh-----------------CCCeEEE
Confidence 45677776666555444443332 23457999999999999988863 2258999
Q ss_pred cCCCcchHHhhhhcCCCCcceeeeccccccccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHH
Q 037735 87 NDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAA 166 (329)
Q Consensus 87 nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~ 166 (329)
.|+...+....-+.++. ..|..+ ++.. +.+++++|+|+|+.++||+.+
T Consensus 85 vD~s~~~~~~a~~~~~~--~~~~~~---d~~~-~~~~~~fD~v~~~~~l~~~~d-------------------------- 132 (279)
T 3ccf_A 85 TDNAATMIEKARQNYPH--LHFDVA---DARN-FRVDKPLDAVFSNAMLHWVKE-------------------------- 132 (279)
T ss_dssp EESCHHHHHHHHHHCTT--SCEEEC---CTTT-CCCSSCEEEEEEESCGGGCSC--------------------------
T ss_pred EECCHHHHHHHHhhCCC--CEEEEC---Chhh-CCcCCCcCEEEEcchhhhCcC--------------------------
Confidence 99988777665554432 234443 4533 434689999999999999754
Q ss_pred HHhhcHHHHHHHHHHHhccCceEEEEecccCCCCcccCCcccchHHHHHHHHHHHHhcCCc-CCCc--ccCCCHHHHHHH
Q 037735 167 QFNNDFQTFLNTRAQELVPGGLAALVMFSVPDGIPLVNNAAGSFYNTFGSCLVELTKMGIL-SKEK--MYNPTPKELEGI 243 (329)
Q Consensus 167 q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i-~~~~--~y~ps~eE~~~~ 243 (329)
...+|+..++.|+|||++++.+++.++.. .+.+.+...+... |.- .... .++++.+++.++
T Consensus 133 -----~~~~l~~~~~~LkpgG~l~~~~~~~~~~~--------~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 196 (279)
T 3ccf_A 133 -----PEAAIASIHQALKSGGRFVAEFGGKGNIK--------YILEALYNALETL---GIHNPQALNPWYFPSIGEYVNI 196 (279)
T ss_dssp -----HHHHHHHHHHHEEEEEEEEEEEECTTTTH--------HHHHHHHHHHHHH---TCCCGGGGCCCCCCCHHHHHHH
T ss_pred -----HHHHHHHHHHhcCCCcEEEEEecCCcchH--------HHHHHHHHHHHhc---CCccccCcCceeCCCHHHHHHH
Confidence 34789999999999999999998765421 1233333333332 321 1111 577899999999
Q ss_pred HHhCCceEEeEEEEeecC-cccccccHHHHhhhHhhhhhhHHhhhcChHHHHHHHHHHHHHHHHh
Q 037735 244 IQRNGNFTIERMEKMTNP-KQQVLCSASDLAVAMRAVYEGLVKEHFGDEFVDKIFNHFATKAEEN 307 (329)
Q Consensus 244 i~~~g~f~i~~~e~~~~~-~~~~~~~~~~~~~~iRa~~e~~~~~~~g~~~~d~~f~ry~~~~~~~ 307 (329)
+++.| |+++.++....+ .+. .+++.+..+++++..+.+. .++++..+++.+++.+.+...
T Consensus 197 l~~aG-f~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 257 (279)
T 3ccf_A 197 LEKQG-FDVTYAALFNRPTTLA--EGEFGMANWIQMFASAFLV-GLTPDQQVQLIRKVEATLQDK 257 (279)
T ss_dssp HHHHT-EEEEEEEEEECCEECS--SGGGHHHHHHHHHCHHHHT-TCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHcC-CEEEEEEEeccccccc--CCHHHHHHHHHHhhHHHhc-cCCHHHHHHHHHHHHHHHHhh
Confidence 99985 999988876544 222 1356677888877665554 478888888888888877664
No 6
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.64 E-value=2e-15 Score=136.76 Aligned_cols=251 Identities=13% Similarity=0.108 Sum_probs=155.0
Q ss_pred cchHHHhHHHHHHHHHhHhhHHHHHhhcccCCCCCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEec
Q 037735 8 HSYASNSAYQSIQVYILRYDPRTAVTDLGTNAVPNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFN 87 (329)
Q Consensus 8 ~sY~~nS~~Q~~~~~~~~~~l~~ai~~i~~~~~~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~n 87 (329)
..|++....+......+...+.+.... ..+..+|+|+|||+|..+..+.. . ..+++..
T Consensus 10 ~~y~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~~vLDiG~G~G~~~~~l~~--------~---------~~~v~~v 67 (263)
T 2yqz_A 10 YAYDRLRAHPPEVAGQIATAMASAVHP-----KGEEPVFLELGVGTGRIALPLIA--------R---------GYRYIAL 67 (263)
T ss_dssp HHHHHHHCCCHHHHHHHHHHHHHHCCC-----SSSCCEEEEETCTTSTTHHHHHT--------T---------TCEEEEE
T ss_pred HHHhhhcccChHHHHHHHHHHHHhhcC-----CCCCCEEEEeCCcCCHHHHHHHH--------C---------CCEEEEE
Confidence 356665555555555555444321111 23457999999999999988864 1 1479999
Q ss_pred CCCcchHHhhhhcCCC--CcceeeeccccccccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHH
Q 037735 88 DHSDNDFNTLFKSLPQ--SRSYYAAGVPGSFYSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYA 165 (329)
Q Consensus 88 DLp~ndfn~lf~~l~~--~~~~f~~gvpgsFy~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~ 165 (329)
|+..++....-+.+.. .+..|..+ ++..-.+|++++|+|+++.++||+.+.
T Consensus 68 D~s~~~~~~a~~~~~~~~~~~~~~~~---d~~~~~~~~~~fD~v~~~~~l~~~~~~------------------------ 120 (263)
T 2yqz_A 68 DADAAMLEVFRQKIAGVDRKVQVVQA---DARAIPLPDESVHGVIVVHLWHLVPDW------------------------ 120 (263)
T ss_dssp ESCHHHHHHHHHHTTTSCTTEEEEES---CTTSCCSCTTCEEEEEEESCGGGCTTH------------------------
T ss_pred ECCHHHHHHHHHHhhccCCceEEEEc---ccccCCCCCCCeeEEEECCchhhcCCH------------------------
Confidence 9988777666555411 12234443 565545789999999999999997543
Q ss_pred HHHhhcHHHHHHHHHHHhccCceEEEEecccCCCCcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHH
Q 037735 166 AQFNNDFQTFLNTRAQELVPGGLAALVMFSVPDGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQ 245 (329)
Q Consensus 166 ~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~ 245 (329)
..+|+..++.|+|||++++.....+. .. ...+.+.+...+..+ |.-.....++.+.+++.+.++
T Consensus 121 -------~~~l~~~~~~L~pgG~l~~~~~~~~~-~~-----~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~ 184 (263)
T 2yqz_A 121 -------PKVLAEAIRVLKPGGALLEGWDQAEA-SP-----EWTLQERWRAFAAEE---GFPVERGLHAKRLKEVEEALR 184 (263)
T ss_dssp -------HHHHHHHHHHEEEEEEEEEEEEEECC-CH-----HHHHHHHHHHHHHHH---TCCCCCCHHHHHHHHHHHHHH
T ss_pred -------HHHHHHHHHHCCCCcEEEEEecCCCc-cH-----HHHHHHHHHHHHHHh---CCCcccccccCCHHHHHHHHH
Confidence 47899999999999999999333311 11 001122333333322 311111144568999999999
Q ss_pred hCCceEEeEEEEeecCcccccccHHHHhhhHhhhhhhHHhhhcChHHHHHHHHHHHHHHHHhhhhhhhhcCCCceEEEEE
Q 037735 246 RNGNFTIERMEKMTNPKQQVLCSASDLAVAMRAVYEGLVKEHFGDEFVDKIFNHFATKAEENISIIGQRVQDSMMDLFIL 325 (329)
Q Consensus 246 ~~g~f~i~~~e~~~~~~~~~~~~~~~~~~~iRa~~e~~~~~~~g~~~~d~~f~ry~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (329)
..| |++...+...-. ...+++.+..++++.+.+.. .+++++..+++.+++++.+.++.... +....-...++++
T Consensus 185 ~~G-f~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~ 258 (263)
T 2yqz_A 185 RLG-LKPRTREVARWR---EERTPREALEALSERLYSFT-QGLPEPVHARVMERLWAWAEAELGDL-DRPFPVEKRFLLR 258 (263)
T ss_dssp HTT-CCCEEEEEEEEE---EEECHHHHHHHHHTTCSGGG-SSSCHHHHHHHHHHHHHHHHHHSSCT-TSCEEEEEEEEEE
T ss_pred HcC-CCcceEEEeeee---cCCCHHHHHHHHHHhhcccc-cCCCHHHHHHHHHHHHHHHHHhcCCc-CccccccceeEEE
Confidence 985 998776554211 11246778888876554443 46888888998888888887654321 1112234555566
Q ss_pred EEeC
Q 037735 326 LKRI 329 (329)
Q Consensus 326 L~r~ 329 (329)
.-||
T Consensus 259 ~~rk 262 (263)
T 2yqz_A 259 VSRL 262 (263)
T ss_dssp EEEC
T ss_pred eeec
Confidence 6554
No 7
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.55 E-value=3.9e-13 Score=122.73 Aligned_cols=193 Identities=17% Similarity=0.162 Sum_probs=124.9
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC----CCcceeeecccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP----QSRSYYAAGVPGSF 116 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~----~~~~~f~~gvpgsF 116 (329)
.+..+|+|+|||+|..+..+.+ ++ ..+|+..|+........-+.+. ..+..|.. +++
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~--------~~--------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~---~d~ 120 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLAT--------AR--------DVRVTGISISRPQVNQANARATAAGLANRVTFSY---ADA 120 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHH--------HS--------CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE---CCT
T ss_pred CCCCEEEEeCCCCCHHHHHHHH--------hc--------CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEE---Ccc
Confidence 3457999999999999988874 21 2589999998766555433321 11223444 467
Q ss_pred ccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEeccc
Q 037735 117 YSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSV 196 (329)
Q Consensus 117 y~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~ 196 (329)
.+..+|++++|+|+|+.++||+.+. ..+|+..++.|+|||++++..+..
T Consensus 121 ~~~~~~~~~fD~v~~~~~l~~~~~~-------------------------------~~~l~~~~~~L~pgG~l~i~~~~~ 169 (273)
T 3bus_A 121 MDLPFEDASFDAVWALESLHHMPDR-------------------------------GRALREMARVLRPGGTVAIADFVL 169 (273)
T ss_dssp TSCCSCTTCEEEEEEESCTTTSSCH-------------------------------HHHHHHHHTTEEEEEEEEEEEEEE
T ss_pred ccCCCCCCCccEEEEechhhhCCCH-------------------------------HHHHHHHHHHcCCCeEEEEEEeec
Confidence 5555889999999999999997532 478999999999999999999876
Q ss_pred CCCCcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEeecCcccccccHHHHhhhH
Q 037735 197 PDGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKMTNPKQQVLCSASDLAVAM 276 (329)
Q Consensus 197 ~~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~~~~~~~~~~~~~~~~~~i 276 (329)
.+.... .....+...+.. ..+ .++++.+++.+.+++.| |++++++.+...+.. .-..+...+
T Consensus 170 ~~~~~~------~~~~~~~~~~~~--~~~------~~~~~~~~~~~~l~~aG-f~~~~~~~~~~~~~~---~~~~~~~~~ 231 (273)
T 3bus_A 170 LAPVEG------AKKEAVDAFRAG--GGV------LSLGGIDEYESDVRQAE-LVVTSTVDISAQARP---SLVKTAEAF 231 (273)
T ss_dssp SSCCCH------HHHHHHHHHHHH--HTC------CCCCCHHHHHHHHHHTT-CEEEEEEECHHHHTT---HHHHHHHHH
T ss_pred cCCCCh------hHHHHHHHHHhh--cCc------cCCCCHHHHHHHHHHcC-CeEEEEEECcHhHHH---HHHHHHHHH
Confidence 542210 001111111111 112 56799999999999985 999888876433111 122333333
Q ss_pred hhhhhhHHhhhcChHHHHHHHHHHHH
Q 037735 277 RAVYEGLVKEHFGDEFVDKIFNHFAT 302 (329)
Q Consensus 277 Ra~~e~~~~~~~g~~~~d~~f~ry~~ 302 (329)
++.... +...+|++..+.+.+.++.
T Consensus 232 ~~~~~~-~~~~~~~~~~~~~~~~~~~ 256 (273)
T 3bus_A 232 ENARSQ-VEPFMGAEGLDRMIATFRG 256 (273)
T ss_dssp HHTHHH-HHHHHCHHHHHHHHHHHHH
T ss_pred HHhHHH-HHhhcCHHHHHHHHHHHHH
Confidence 333222 3456788777777766655
No 8
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.49 E-value=3.7e-13 Score=120.18 Aligned_cols=161 Identities=14% Similarity=0.091 Sum_probs=115.4
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCc-ceeeeccccccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSR-SYYAAGVPGSFYSS 119 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~-~~f~~gvpgsFy~~ 119 (329)
.+..+|+|+|||+|..+..+.. . .|..+++..|+........-+.+.... .-|.. +++.+.
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~--------~-------~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~---~d~~~~ 104 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLME--------K-------YPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIE---ADYSKY 104 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHH--------H-------CTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEE---SCTTTC
T ss_pred CCCCeEEEecCCCCHHHHHHHH--------h-------CCCCeEEEEECCHHHHHHHHHhhccCCCEEEEe---Cchhcc
Confidence 4568999999999999988875 2 234689999998877776665554322 23444 466444
Q ss_pred cCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCCC
Q 037735 120 LFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPDG 199 (329)
Q Consensus 120 lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~~ 199 (329)
.++ +++|+|+++.++||+++. +...+|+..++.|+|||+++++.+..++.
T Consensus 105 ~~~-~~fD~v~~~~~l~~~~~~-----------------------------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 154 (234)
T 3dtn_A 105 DFE-EKYDMVVSALSIHHLEDE-----------------------------DKKELYKRSYSILKESGIFINADLVHGET 154 (234)
T ss_dssp CCC-SCEEEEEEESCGGGSCHH-----------------------------HHHHHHHHHHHHEEEEEEEEEEEECBCSS
T ss_pred CCC-CCceEEEEeCccccCCHH-----------------------------HHHHHHHHHHHhcCCCcEEEEEEecCCCC
Confidence 455 999999999999997431 23468999999999999999999877653
Q ss_pred CcccCCcccchHHHHHHHHHHHHhcCCcCCCc----------ccCCCHHHHHHHHHhCCceEEeEEEEe
Q 037735 200 IPLVNNAAGSFYNTFGSCLVELTKMGILSKEK----------MYNPTPKELEGIIQRNGNFTIERMEKM 258 (329)
Q Consensus 200 ~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~----------~y~ps~eE~~~~i~~~g~f~i~~~e~~ 258 (329)
.. ........|.....++-++.++ .+.++.+|+.+++++.| |+++++...
T Consensus 155 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG-F~~v~~~~~ 214 (234)
T 3dtn_A 155 AF--------IENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQLNWLKEAG-FRDVSCIYK 214 (234)
T ss_dssp HH--------HHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHHHHHHHTT-CEEEEEEEE
T ss_pred hh--------hhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHHHHHHHcC-CCceeeeee
Confidence 21 2334455666665544334332 45679999999999995 998877644
No 9
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.48 E-value=3.8e-12 Score=118.56 Aligned_cols=169 Identities=14% Similarity=0.117 Sum_probs=109.6
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC---C-cceeeecccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ---S-RSYYAAGVPGSF 116 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~---~-~~~f~~gvpgsF 116 (329)
.+..+|||+|||+|..+..+.+.. + .+|+..|+..+.....-+.+.. . +-.+..+ ++
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la~~~---------------~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~---d~ 131 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAVAEY---------------D-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQ---GW 131 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH---------------C-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEEC---CG
T ss_pred CCcCEEEEeeccCcHHHHHHHHhC---------------C-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC---CH
Confidence 345799999999999999887522 2 5899999988776655443321 1 2234444 45
Q ss_pred ccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEeccc
Q 037735 117 YSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSV 196 (329)
Q Consensus 117 y~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~ 196 (329)
..+ ++++|+|+|+.++|++.+.... .-.+++..+|+...+.|+|||+|++..+..
T Consensus 132 -~~~--~~~fD~v~~~~~~~~~~d~~~~----------------------~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 186 (302)
T 3hem_A 132 -EEF--DEPVDRIVSLGAFEHFADGAGD----------------------AGFERYDTFFKKFYNLTPDDGRMLLHTITI 186 (302)
T ss_dssp -GGC--CCCCSEEEEESCGGGTTCCSSC----------------------CCTTHHHHHHHHHHHSSCTTCEEEEEEEEC
T ss_pred -HHc--CCCccEEEEcchHHhcCccccc----------------------cchhHHHHHHHHHHHhcCCCcEEEEEEEec
Confidence 233 7899999999999998765100 001367799999999999999999999987
Q ss_pred CCCCcccCCcccchHH--HHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEeec
Q 037735 197 PDGIPLVNNAAGSFYN--TFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKMTN 260 (329)
Q Consensus 197 ~~~~~~~~~~~~~~~~--~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~~~ 260 (329)
++............++ ....-+...+--| .++|+++++.+.+++. +|+++.++.+..
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~~~~s~~~~~~~l~~a-Gf~~~~~~~~~~ 245 (302)
T 3hem_A 187 PDKEEAQELGLTSPMSLLRFIKFILTEIFPG------GRLPRISQVDYYSSNA-GWKVERYHRIGA 245 (302)
T ss_dssp CCHHHHHHHTCCCCHHHHHHHHHHHHHTCTT------CCCCCHHHHHHHHHHH-TCEEEEEEECGG
T ss_pred cCccchhhccccccccccchHHHHHHhcCCC------CCCCCHHHHHHHHHhC-CcEEEEEEeCch
Confidence 6532100000000000 0001112222223 4679999999999998 499998877643
No 10
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.45 E-value=6.1e-13 Score=122.80 Aligned_cols=192 Identities=15% Similarity=0.182 Sum_probs=115.4
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeecccccccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSSL 120 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~l 120 (329)
+...+|+|+|||+|..|..+.. + -.+|+..|+..++....-+ .+ +-.|..| ++..-.
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~--------~---------~~~v~gvD~s~~ml~~a~~-~~--~v~~~~~---~~e~~~ 94 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAE--------F---------FERVHAVDPGEAQIRQALR-HP--RVTYAVA---PAEDTG 94 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHT--------T---------CSEEEEEESCHHHHHTCCC-CT--TEEEEEC---CTTCCC
T ss_pred CCCCCEEEEcCCCCHHHHHHHH--------h---------CCEEEEEeCcHHhhhhhhh-cC--Cceeehh---hhhhhc
Confidence 3456899999999999998864 1 1479999998877554322 11 2234443 575556
Q ss_pred CCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCCCC
Q 037735 121 FPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPDGI 200 (329)
Q Consensus 121 fp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~~~ 200 (329)
+|++|+|+|+|+.++||++ . ..||++.++.|+|||+|++...+.....
T Consensus 95 ~~~~sfD~v~~~~~~h~~~-~-------------------------------~~~~~e~~rvLkpgG~l~~~~~~~~~~~ 142 (257)
T 4hg2_A 95 LPPASVDVAIAAQAMHWFD-L-------------------------------DRFWAELRRVARPGAVFAAVTYGLTRVD 142 (257)
T ss_dssp CCSSCEEEEEECSCCTTCC-H-------------------------------HHHHHHHHHHEEEEEEEEEEEECCCBCC
T ss_pred ccCCcccEEEEeeehhHhh-H-------------------------------HHHHHHHHHHcCCCCEEEEEECCCCCCC
Confidence 8999999999999999963 2 3789999999999999999998876533
Q ss_pred cccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHH-HHHHHHhCCceEEeEEEEeecCcccccccHHHHhhhHhhh
Q 037735 201 PLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKE-LEGIIQRNGNFTIERMEKMTNPKQQVLCSASDLAVAMRAV 279 (329)
Q Consensus 201 ~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE-~~~~i~~~g~f~i~~~e~~~~~~~~~~~~~~~~~~~iRa~ 279 (329)
+ .+...+..+..+-+- -|.+.... +....+ .-.|....++.... ......+.+.+..++|++
T Consensus 143 ~-----------~~~~~~~~~~~~~~~----~~~~~~~~~~~~~y~-~l~~pf~~~~~~~~-~~~~~~tl~~~~~~l~T~ 205 (257)
T 4hg2_A 143 P-----------EVDAVVDRLYHGLLA----RDWPPERVHVESGYR-TLPFPFPELEAPPL-EIEERWPMDAFLGYLGTW 205 (257)
T ss_dssp H-----------HHHHHHHHHHHTTTG----GGCCSCCHHHHTTTT-TSCCCSCEECCCCC-EEEEEECHHHHHHHHTTS
T ss_pred H-----------HHHHHHHHHHhcccc----cccchhhhHHHhhhh-hCCCCCccceeeEE-EEEEEecHHHHHHHHHHH
Confidence 2 334444444332210 22222111 111111 10111111111100 111122467788999987
Q ss_pred hh-hHHhhhcChHHHHHHHHHHHHHH
Q 037735 280 YE-GLVKEHFGDEFVDKIFNHFATKA 304 (329)
Q Consensus 280 ~e-~~~~~~~g~~~~d~~f~ry~~~~ 304 (329)
+. ......-+++.++++.+++++.+
T Consensus 206 S~~~~~~~~~~~d~l~~~~~~l~~~~ 231 (257)
T 4hg2_A 206 SAVTAHRRRTGADPLAEIAPALRAAW 231 (257)
T ss_dssp HHHHHHHHHHSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCccHHHHHHHHHHHhc
Confidence 64 23344457777777777776554
No 11
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.44 E-value=6e-12 Score=113.67 Aligned_cols=153 Identities=14% Similarity=0.183 Sum_probs=110.4
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCC-cceeeeccccccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQS-RSYYAAGVPGSFYSS 119 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~-~~~f~~gvpgsFy~~ 119 (329)
.+..+|+|+|||+|..+..+.. ++ ..+|+..|+..+.....-+..... +..|..+ ++...
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~--------~~--------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~---d~~~~ 114 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINE--------KY--------GAHTHGIDICSNIVNMANERVSGNNKIIFEAN---DILTK 114 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHH--------HH--------CCEEEEEESCHHHHHHHHHTCCSCTTEEEEEC---CTTTC
T ss_pred CCCCEEEEECCCCCHHHHHHHH--------Hc--------CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEEC---ccccC
Confidence 3457999999999999988875 21 148999999887766655554331 2234443 56555
Q ss_pred cCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCCC
Q 037735 120 LFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPDG 199 (329)
Q Consensus 120 lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~~ 199 (329)
.+|++++|+|+|+.++||++. .|...+|+..++.|+|||++++..+..++.
T Consensus 115 ~~~~~~fD~v~~~~~l~~~~~-----------------------------~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 165 (266)
T 3ujc_A 115 EFPENNFDLIYSRDAILALSL-----------------------------ENKNKLFQKCYKWLKPTGTLLITDYCATEK 165 (266)
T ss_dssp CCCTTCEEEEEEESCGGGSCH-----------------------------HHHHHHHHHHHHHEEEEEEEEEEEEEESCG
T ss_pred CCCCCcEEEEeHHHHHHhcCh-----------------------------HHHHHHHHHHHHHcCCCCEEEEEEeccCCc
Confidence 688999999999999999731 256689999999999999999999876652
Q ss_pred CcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEee
Q 037735 200 IPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKMT 259 (329)
Q Consensus 200 ~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~~ 259 (329)
.+. ...+...+ ...| ..+++.+++.+.++.. +|++++.+.+.
T Consensus 166 ~~~--------~~~~~~~~---~~~~------~~~~~~~~~~~~l~~~-Gf~~~~~~~~~ 207 (266)
T 3ujc_A 166 ENW--------DDEFKEYV---KQRK------YTLITVEEYADILTAC-NFKNVVSKDLS 207 (266)
T ss_dssp GGC--------CHHHHHHH---HHHT------CCCCCHHHHHHHHHHT-TCEEEEEEECH
T ss_pred ccc--------hHHHHHHH---hcCC------CCCCCHHHHHHHHHHc-CCeEEEEEeCC
Confidence 221 11122111 2234 5678999999999998 49998887663
No 12
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.44 E-value=4.4e-12 Score=114.56 Aligned_cols=207 Identities=16% Similarity=0.111 Sum_probs=132.4
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC----Ccceeeeccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ----SRSYYAAGVPGSFY 117 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~----~~~~f~~gvpgsFy 117 (329)
+..+|+|+|||+|..+..+.. . .+ .+|+..|+........-+.+.. .+..|..+ ++.
T Consensus 46 ~~~~vLDiG~G~G~~~~~l~~--------~-------~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~---d~~ 106 (257)
T 3f4k_A 46 DDAKIADIGCGTGGQTLFLAD--------Y-------VK-GQITGIDLFPDFIEIFNENAVKANCADRVKGITG---SMD 106 (257)
T ss_dssp TTCEEEEETCTTSHHHHHHHH--------H-------CC-SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEEC---CTT
T ss_pred CCCeEEEeCCCCCHHHHHHHH--------h-------CC-CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEEC---Chh
Confidence 456999999999999998875 2 23 2899999987666654333211 11234444 564
Q ss_pred cccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccC
Q 037735 118 SSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVP 197 (329)
Q Consensus 118 ~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~ 197 (329)
.-.+|++++|+|+|+.++||+ +. ..+|+...+.|+|||+++++.+...
T Consensus 107 ~~~~~~~~fD~v~~~~~l~~~-~~-------------------------------~~~l~~~~~~L~pgG~l~~~~~~~~ 154 (257)
T 3f4k_A 107 NLPFQNEELDLIWSEGAIYNI-GF-------------------------------ERGMNEWSKYLKKGGFIAVSEASWF 154 (257)
T ss_dssp SCSSCTTCEEEEEEESCSCCC-CH-------------------------------HHHHHHHHTTEEEEEEEEEEEEEES
T ss_pred hCCCCCCCEEEEEecChHhhc-CH-------------------------------HHHHHHHHHHcCCCcEEEEEEeecc
Confidence 445788999999999999997 22 2679999999999999999987633
Q ss_pred CCCcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEeecC-cccccccHHHHhhhH
Q 037735 198 DGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKMTNP-KQQVLCSASDLAVAM 276 (329)
Q Consensus 198 ~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~~~~-~~~~~~~~~~~~~~i 276 (329)
..... ..+...|.... ..+++.+++.+.+++.| |+++........ |.+. +...+
T Consensus 155 ~~~~~---------~~~~~~~~~~~---------~~~~~~~~~~~~l~~aG-f~~v~~~~~~~~~w~~~------~~~~~ 209 (257)
T 3f4k_A 155 TSERP---------AEIEDFWMDAY---------PEISVIPTCIDKMERAG-YTPTAHFILPENCWTEH------YFAPQ 209 (257)
T ss_dssp SSCCC---------HHHHHHHHHHC---------TTCCBHHHHHHHHHHTT-EEEEEEEECCGGGTCCC------CCHHH
T ss_pred CCCCh---------HHHHHHHHHhC---------CCCCCHHHHHHHHHHCC-CeEEEEEECChhhHHHH------HHHHH
Confidence 32111 12333344321 23579999999999985 999887766443 5322 22333
Q ss_pred hhhhhhHHhhhcChHHHHHHHHHHHHHHHHhhhhhhhhcCCCceEEEEEEEeC
Q 037735 277 RAVYEGLVKEHFGDEFVDKIFNHFATKAEENISIIGQRVQDSMMDLFILLKRI 329 (329)
Q Consensus 277 Ra~~e~~~~~~~g~~~~d~~f~ry~~~~~~~~~~~~~~~~~~~~~~~~~L~r~ 329 (329)
+...+.....+-+....+++.++.++....+ ..+ ...+--.+++++|+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~g~~~~v~~k~ 257 (257)
T 3f4k_A 210 DEVRETFMKEHAGNKTAMDFMKGQQYERSLY-SKY----KDYYGYVFYIGQKR 257 (257)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-HHH----TTTEEEEEEEEEEC
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHh----CCccceEEEEEecC
Confidence 3444444555556666666666655544433 222 12234566777775
No 13
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.43 E-value=5.2e-12 Score=116.91 Aligned_cols=150 Identities=14% Similarity=0.069 Sum_probs=105.5
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC---CC-Ccceeeecccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL---PQ-SRSYYAAGVPGSF 116 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l---~~-~~~~f~~gvpgsF 116 (329)
.+..+|||+|||+|..+..+.+.. ..+++..|+........-+.+ .. .+--|.. +++
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~----------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~---~d~ 141 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKF----------------GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKY---GSF 141 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH----------------CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEE---CCT
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHh----------------CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEE---cCc
Confidence 345799999999999999887521 147999999876655543322 11 1223444 367
Q ss_pred ccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEeccc
Q 037735 117 YSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSV 196 (329)
Q Consensus 117 y~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~ 196 (329)
.+-.+|++++|+|++..++||+.+ ...+|+..++.|+|||+|+++.+..
T Consensus 142 ~~~~~~~~~fD~v~~~~~l~~~~~-------------------------------~~~~l~~~~~~LkpgG~l~~~~~~~ 190 (297)
T 2o57_A 142 LEIPCEDNSYDFIWSQDAFLHSPD-------------------------------KLKVFQECARVLKPRGVMAITDPMK 190 (297)
T ss_dssp TSCSSCTTCEEEEEEESCGGGCSC-------------------------------HHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred ccCCCCCCCEeEEEecchhhhcCC-------------------------------HHHHHHHHHHHcCCCeEEEEEEecc
Confidence 665688999999999999999754 2488999999999999999999876
Q ss_pred CCCCcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEe
Q 037735 197 PDGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKM 258 (329)
Q Consensus 197 ~~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~ 258 (329)
.+..+.. .+...+... +. ..+++.+++.+++++.| |++++++.+
T Consensus 191 ~~~~~~~---------~~~~~~~~~---~~-----~~~~~~~~~~~~l~~aG-f~~~~~~~~ 234 (297)
T 2o57_A 191 EDGIDKS---------SIQPILDRI---KL-----HDMGSLGLYRSLAKECG-LVTLRTFSR 234 (297)
T ss_dssp CTTCCGG---------GGHHHHHHH---TC-----SSCCCHHHHHHHHHHTT-EEEEEEEEC
T ss_pred CCCCchH---------HHHHHHHHh---cC-----CCCCCHHHHHHHHHHCC-CeEEEEEEC
Confidence 6532210 111112222 11 34579999999999984 999888765
No 14
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.43 E-value=4e-13 Score=118.64 Aligned_cols=153 Identities=19% Similarity=0.211 Sum_probs=107.6
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeeccccccccccC
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSSLF 121 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~lf 121 (329)
+..+|+|+|||+|.++..+.. + ..+++..|+........-+.++ .+.-|.. +++.+-.+
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~--------~---------~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~---~d~~~~~~ 103 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLL--------A---------GRTVYGIEPSREMRMIAKEKLP-KEFSITE---GDFLSFEV 103 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHH--------T---------TCEEEEECSCHHHHHHHHHHSC-TTCCEES---CCSSSCCC
T ss_pred CCCeEEEeCCCCCHHHHHHHh--------C---------CCeEEEEeCCHHHHHHHHHhCC-CceEEEe---CChhhcCC
Confidence 457999999999999888864 1 1589999998877666655554 1223444 35655456
Q ss_pred CCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCCCCc
Q 037735 122 PKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPDGIP 201 (329)
Q Consensus 122 p~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~~~~ 201 (329)
+ +++|+|+++.++||+.+.. ...+|+..++.|+|||.++++.+...+.
T Consensus 104 ~-~~fD~v~~~~~l~~~~~~~-----------------------------~~~~l~~~~~~LkpgG~l~i~~~~~~~~-- 151 (220)
T 3hnr_A 104 P-TSIDTIVSTYAFHHLTDDE-----------------------------KNVAIAKYSQLLNKGGKIVFADTIFADQ-- 151 (220)
T ss_dssp C-SCCSEEEEESCGGGSCHHH-----------------------------HHHHHHHHHHHSCTTCEEEEEEECBSSH--
T ss_pred C-CCeEEEEECcchhcCChHH-----------------------------HHHHHHHHHHhcCCCCEEEEEeccccCh--
Confidence 6 9999999999999975321 2358999999999999999998655431
Q ss_pred ccCCcccchHHHHHHHHHHHHhcCCcCCCc----ccCCCHHHHHHHHHhCCceEEeEEEEe
Q 037735 202 LVNNAAGSFYNTFGSCLVELTKMGILSKEK----MYNPTPKELEGIIQRNGNFTIERMEKM 258 (329)
Q Consensus 202 ~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~----~y~ps~eE~~~~i~~~g~f~i~~~e~~ 258 (329)
......+..+...|...... .++++.+++.+.+++.| |+++..+..
T Consensus 152 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~~~ 201 (220)
T 3hnr_A 152 ----------DAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNG-FHVTFTRLN 201 (220)
T ss_dssp ----------HHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTT-EEEEEEECS
T ss_pred ----------HHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCC-CEEEEeecc
Confidence 12223333444444321111 67889999999999995 998887754
No 15
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.42 E-value=1.8e-12 Score=120.42 Aligned_cols=156 Identities=10% Similarity=0.084 Sum_probs=100.3
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccce--EEecCCCcchHHhhhhcCCC---Ccce-eeecccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQ--VFFNDHSDNDFNTLFKSLPQ---SRSY-YAAGVPG 114 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~--v~~nDLp~ndfn~lf~~l~~---~~~~-f~~gvpg 114 (329)
.+..+|||+|||+|..|..++..+. .+ .|... ++..|...++....-+.+.. ..++ |.. ..+
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~----~~-------~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~-~~~ 118 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQ----AQ-------YPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAW-HKE 118 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHH----HH-------STTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEE-ECS
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHH----hh-------CCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEE-Eec
Confidence 3567999999999988877665431 12 23343 49999998887765443311 1111 111 112
Q ss_pred ccccc------cCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCce
Q 037735 115 SFYSS------LFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGL 188 (329)
Q Consensus 115 sFy~~------lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~ 188 (329)
+.... -|+++++|+|+++.++||+.++ ..+|+..++.|+|||+
T Consensus 119 ~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~d~-------------------------------~~~l~~~~r~LkpgG~ 167 (292)
T 2aot_A 119 TSSEYQSRMLEKKELQKWDFIHMIQMLYYVKDI-------------------------------PATLKFFHSLLGTNAK 167 (292)
T ss_dssp CHHHHHHHHHTTTCCCCEEEEEEESCGGGCSCH-------------------------------HHHHHHHHHTEEEEEE
T ss_pred chhhhhhhhccccCCCceeEEEEeeeeeecCCH-------------------------------HHHHHHHHHHcCCCcE
Confidence 33221 2578999999999999997643 4789999999999999
Q ss_pred EEEEecccCCCCcccCCcccchHHHHHHHHHHHHhcCCcCCCc-ccCCCHHHHHHHHHhCCceEEeEEE
Q 037735 189 AALVMFSVPDGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEK-MYNPTPKELEGIIQRNGNFTIERME 256 (329)
Q Consensus 189 l~~~~~g~~~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~-~y~ps~eE~~~~i~~~g~f~i~~~e 256 (329)
+++.....+. .|. ..|..... . +.... ..+++++++.+++++.| |++....
T Consensus 168 l~i~~~~~~~-----------~~~---~~~~~~~~-~-~~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~ 219 (292)
T 2aot_A 168 MLIIVVSGSS-----------GWD---KLWKKYGS-R-FPQDDLCQYITSDDLTQMLDNLG-LKYECYD 219 (292)
T ss_dssp EEEEEECTTS-----------HHH---HHHHHHGG-G-SCCCTTCCCCCHHHHHHHHHHHT-CCEEEEE
T ss_pred EEEEEecCCc-----------cHH---HHHHHHHH-h-ccCCCcccCCCHHHHHHHHHHCC-CceEEEE
Confidence 9999765432 111 12232211 1 01111 56689999999999985 9887644
No 16
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.40 E-value=8.8e-12 Score=113.79 Aligned_cols=208 Identities=16% Similarity=0.095 Sum_probs=130.4
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC---C-Ccceeeecccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP---Q-SRSYYAAGVPGSF 116 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~---~-~~~~f~~gvpgsF 116 (329)
.+..+|+|+|||+|..+..+.. .+..+|+..|+........-+.+. - .+.-|..+ ++
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~----------------~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~---d~ 105 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAG----------------HVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVG---SM 105 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHT----------------TCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEEC---CT
T ss_pred CCCCEEEEeCCCCCHHHHHHHh----------------ccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEc---Ch
Confidence 4568999999999999988864 234589999998776665443321 1 12334443 56
Q ss_pred ccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEeccc
Q 037735 117 YSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSV 196 (329)
Q Consensus 117 y~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~ 196 (329)
.+-.+|++++|+|+|+.++|++ +. ..+|+...+.|+|||+++++.+..
T Consensus 106 ~~~~~~~~~fD~i~~~~~~~~~-~~-------------------------------~~~l~~~~~~LkpgG~l~~~~~~~ 153 (267)
T 3kkz_A 106 DDLPFRNEELDLIWSEGAIYNI-GF-------------------------------ERGLNEWRKYLKKGGYLAVSECSW 153 (267)
T ss_dssp TSCCCCTTCEEEEEESSCGGGT-CH-------------------------------HHHHHHHGGGEEEEEEEEEEEEEE
T ss_pred hhCCCCCCCEEEEEEcCCceec-CH-------------------------------HHHHHHHHHHcCCCCEEEEEEeee
Confidence 4444789999999999999997 32 378999999999999999998864
Q ss_pred CCCCcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEeecC-cccccccHHHHhhh
Q 037735 197 PDGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKMTNP-KQQVLCSASDLAVA 275 (329)
Q Consensus 197 ~~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~~~~-~~~~~~~~~~~~~~ 275 (329)
...... ..+...|..- . ..+++.+++.+.+++.| |+++..+.+... |.+ .+...
T Consensus 154 ~~~~~~---------~~~~~~~~~~---~------~~~~~~~~~~~~l~~aG-f~~v~~~~~~~~~w~~------~~~~~ 208 (267)
T 3kkz_A 154 FTDERP---------AEINDFWMDA---Y------PEIDTIPNQVAKIHKAG-YLPVATFILPENCWTD------HYFTP 208 (267)
T ss_dssp SSSCCC---------HHHHHHHHHH---C------TTCEEHHHHHHHHHHTT-EEEEEEEECCGGGTTT------TTHHH
T ss_pred cCCCCh---------HHHHHHHHHh---C------CCCCCHHHHHHHHHHCC-CEEEEEEECCHhHHHH------HHHHH
Confidence 332111 1233334321 1 35689999999999985 999988776443 532 23333
Q ss_pred HhhhhhhHHhhhcChHHHHHHHHHHHHHHHHhhhhhhhhcCCCceEEEEEEEeC
Q 037735 276 MRAVYEGLVKEHFGDEFVDKIFNHFATKAEENISIIGQRVQDSMMDLFILLKRI 329 (329)
Q Consensus 276 iRa~~e~~~~~~~g~~~~d~~f~ry~~~~~~~~~~~~~~~~~~~~~~~~~L~r~ 329 (329)
+..+...+...+-....+.++.+...+.... ...+ ...+...|.+++|+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~y----~~~~~~~f~~~~~~ 257 (267)
T 3kkz_A 209 KVAAQKIFLTKYAGNKIAEEFSMLQSIEEEL-YHKY----KEYYGYTFFIAKKI 257 (267)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH-HHHH----TTTEEEEEEEEEEC
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH-HHHh----ccccCeEeehhhHH
Confidence 4444444444433444444544443322221 2212 11245556666653
No 17
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.40 E-value=1.6e-12 Score=116.85 Aligned_cols=173 Identities=12% Similarity=0.070 Sum_probs=114.2
Q ss_pred cchHHHhHHHHHHHHHhHhhHHHHHhhcccCCCCCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEec
Q 037735 8 HSYASNSAYQSIQVYILRYDPRTAVTDLGTNAVPNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFN 87 (329)
Q Consensus 8 ~sY~~nS~~Q~~~~~~~~~~l~~ai~~i~~~~~~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~n 87 (329)
..|.......+.....+...+...+.. ..+..+|||+|||+|..+..+.+ . ..+|+..
T Consensus 12 ~~y~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~vLDiGcG~G~~~~~l~~--------~---------~~~v~gv 69 (240)
T 3dli_A 12 DYYFLFEEKFRGSRELVKARLRRYIPY-----FKGCRRVLDIGCGRGEFLELCKE--------E---------GIESIGV 69 (240)
T ss_dssp CHHHHHHHHHTCCHHHHHHHHGGGGGG-----TTTCSCEEEETCTTTHHHHHHHH--------H---------TCCEEEE
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHhh-----hcCCCeEEEEeCCCCHHHHHHHh--------C---------CCcEEEE
Confidence 345555554443333333333322222 23457999999999999877653 1 1468999
Q ss_pred CCCcchHHhhhhcCCCCcceeeeccccccccc--cCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHH
Q 037735 88 DHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSS--LFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYA 165 (329)
Q Consensus 88 DLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~--lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~ 165 (329)
|+........-+. .-++. +++.+- .+|++++|+|+|+.++||+.+
T Consensus 70 D~s~~~~~~a~~~-----~~~~~---~d~~~~~~~~~~~~fD~i~~~~~l~~~~~------------------------- 116 (240)
T 3dli_A 70 DINEDMIKFCEGK-----FNVVK---SDAIEYLKSLPDKYLDGVMISHFVEHLDP------------------------- 116 (240)
T ss_dssp CSCHHHHHHHHTT-----SEEEC---SCHHHHHHTSCTTCBSEEEEESCGGGSCG-------------------------
T ss_pred ECCHHHHHHHHhh-----cceee---ccHHHHhhhcCCCCeeEEEECCchhhCCc-------------------------
Confidence 9987665554333 11232 344332 578999999999999999752
Q ss_pred HHHhhcHHHHHHHHHHHhccCceEEEEecccCCCCcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHH
Q 037735 166 AQFNNDFQTFLNTRAQELVPGGLAALVMFSVPDGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQ 245 (329)
Q Consensus 166 ~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~ 245 (329)
.|+..+|+..++.|+|||+|++.+++..+. . .+...+ +.....++.+.+++.++++
T Consensus 117 ----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-----------~-~~~~~~--------~~~~~~~~~~~~~l~~~l~ 172 (240)
T 3dli_A 117 ----ERLFELLSLCYSKMKYSSYIVIESPNPTSL-----------Y-SLINFY--------IDPTHKKPVHPETLKFILE 172 (240)
T ss_dssp ----GGHHHHHHHHHHHBCTTCCEEEEEECTTSH-----------H-HHHHHT--------TSTTCCSCCCHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHcCCCcEEEEEeCCcchh-----------H-HHHHHh--------cCccccccCCHHHHHHHHH
Confidence 256789999999999999999999875531 1 111111 1111156789999999999
Q ss_pred hCCceEEeEEEEeec
Q 037735 246 RNGNFTIERMEKMTN 260 (329)
Q Consensus 246 ~~g~f~i~~~e~~~~ 260 (329)
+.| |++...+.+.+
T Consensus 173 ~aG-f~~~~~~~~~~ 186 (240)
T 3dli_A 173 YLG-FRDVKIEFFEE 186 (240)
T ss_dssp HHT-CEEEEEEEECC
T ss_pred HCC-CeEEEEEEecc
Confidence 984 99988887754
No 18
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.40 E-value=1.9e-11 Score=112.58 Aligned_cols=160 Identities=15% Similarity=0.188 Sum_probs=102.9
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC----Ccceeeecccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ----SRSYYAAGVPGSF 116 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~----~~~~f~~gvpgsF 116 (329)
.+..+|+|+|||+|..+..+.+.. + .+|+..|+..+.....-+.+.. .+.-+..+ ++
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~---------------~-~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~---d~ 123 (287)
T 1kpg_A 63 QPGMTLLDVGCGWGATMMRAVEKY---------------D-VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLA---GW 123 (287)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH---------------C-CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEES---CG
T ss_pred CCcCEEEEECCcccHHHHHHHHHc---------------C-CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEEC---Ch
Confidence 345799999999999998887421 1 3899999987776654443221 12234443 45
Q ss_pred ccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEeccc
Q 037735 117 YSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSV 196 (329)
Q Consensus 117 y~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~ 196 (329)
.. +| +++|+|+|..++|++.. .|...+|+..++.|+|||++++..+..
T Consensus 124 -~~-~~-~~fD~v~~~~~l~~~~~-----------------------------~~~~~~l~~~~~~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 124 -EQ-FD-EPVDRIVSIGAFEHFGH-----------------------------ERYDAFFSLAHRLLPADGVMLLHTITG 171 (287)
T ss_dssp -GG-CC-CCCSEEEEESCGGGTCT-----------------------------TTHHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred -hh-CC-CCeeEEEEeCchhhcCh-----------------------------HHHHHHHHHHHHhcCCCCEEEEEEecC
Confidence 22 35 89999999999999742 145688999999999999999999886
Q ss_pred CCCCcccCCcccchHH--HHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEe
Q 037735 197 PDGIPLVNNAAGSFYN--TFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKM 258 (329)
Q Consensus 197 ~~~~~~~~~~~~~~~~--~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~ 258 (329)
.+.......+....+. ....-+..-.-.| ..+|+++++.+.+++. +|++++.+..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~s~~~~~~~l~~a-Gf~~~~~~~~ 228 (287)
T 1kpg_A 172 LHPKEIHERGLPMSFTFARFLKFIVTEIFPG------GRLPSIPMVQECASAN-GFTVTRVQSL 228 (287)
T ss_dssp CCHHHHTTTTCSCHHHHHHHHHHHHHHTSTT------CCCCCHHHHHHHHHTT-TCEEEEEEEC
T ss_pred CCccccccccccccccccchhhhHHheeCCC------CCCCCHHHHHHHHHhC-CcEEEEEEeC
Confidence 5421100000000000 0111111111112 3568999999999988 5999888765
No 19
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.40 E-value=4.8e-13 Score=121.61 Aligned_cols=153 Identities=14% Similarity=0.167 Sum_probs=105.4
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC---CCcceeeeccccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP---QSRSYYAAGVPGSFY 117 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~---~~~~~f~~gvpgsFy 117 (329)
.+..+|+|+|||+|..+..+.. + . .+++..|+...+....-+.+. ..+.-|.. +++.
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~--------~-------~--~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~---~d~~ 95 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAP--------F-------V--KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQ---GDAE 95 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGG--------G-------S--SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEE---CCC-
T ss_pred CCCCEEEEEeCCCCHHHHHHHH--------h-------C--CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEE---ecHH
Confidence 3567999999999998887753 1 1 279999998777665443321 11223444 3565
Q ss_pred cccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccC
Q 037735 118 SSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVP 197 (329)
Q Consensus 118 ~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~ 197 (329)
...+|++++|+|+|+.++||+.+. ..+|+..++.|+|||++++.....+
T Consensus 96 ~l~~~~~~fD~V~~~~~l~~~~d~-------------------------------~~~l~~~~r~LkpgG~l~~~~~~~~ 144 (260)
T 1vl5_A 96 QMPFTDERFHIVTCRIAAHHFPNP-------------------------------ASFVSEAYRVLKKGGQLLLVDNSAP 144 (260)
T ss_dssp CCCSCTTCEEEEEEESCGGGCSCH-------------------------------HHHHHHHHHHEEEEEEEEEEEEEBC
T ss_pred hCCCCCCCEEEEEEhhhhHhcCCH-------------------------------HHHHHHHHHHcCCCCEEEEEEcCCC
Confidence 555889999999999999997543 3789999999999999999876654
Q ss_pred CCCcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEee
Q 037735 198 DGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKMT 259 (329)
Q Consensus 198 ~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~~ 259 (329)
+.. .+..+...+..+...+ ...+.+.+++.+++++. +|++..++...
T Consensus 145 ~~~---------~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~a-Gf~~~~~~~~~ 191 (260)
T 1vl5_A 145 END---------AFDVFYNYVEKERDYS-----HHRAWKKSDWLKMLEEA-GFELEELHCFH 191 (260)
T ss_dssp SSH---------HHHHHHHHHHHHHCTT-----CCCCCBHHHHHHHHHHH-TCEEEEEEEEE
T ss_pred CCH---------HHHHHHHHHHHhcCcc-----ccCCCCHHHHHHHHHHC-CCeEEEEEEee
Confidence 321 1222222223222111 14567999999999988 49998888764
No 20
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.38 E-value=2.8e-12 Score=117.13 Aligned_cols=192 Identities=14% Similarity=0.121 Sum_probs=119.5
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeecccccccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSSL 120 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~l 120 (329)
.+..+|+|+|||+|..+..+.+ +..+|+..|+...+....-+. + +--|.. +++..-.
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~-----------------~~~~v~gvD~s~~~~~~a~~~-~--~~~~~~---~d~~~~~ 89 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALAN-----------------QGLFVYAVEPSIVMRQQAVVH-P--QVEWFT---GYAENLA 89 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHT-----------------TTCEEEEECSCHHHHHSSCCC-T--TEEEEC---CCTTSCC
T ss_pred CCCCEEEEEcCcccHHHHHHHh-----------------CCCEEEEEeCCHHHHHHHHhc-c--CCEEEE---CchhhCC
Confidence 4568999999999999888862 336899999987554432221 1 223444 3565545
Q ss_pred CCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCCCC
Q 037735 121 FPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPDGI 200 (329)
Q Consensus 121 fp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~~~ 200 (329)
+|++++|+|+|+.++||+. |+..+|+..++.|+ ||++++..+.++...
T Consensus 90 ~~~~~fD~v~~~~~l~~~~-------------------------------~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~ 137 (261)
T 3ege_A 90 LPDKSVDGVISILAIHHFS-------------------------------HLEKSFQEMQRIIR-DGTIVLLTFDIRLAQ 137 (261)
T ss_dssp SCTTCBSEEEEESCGGGCS-------------------------------SHHHHHHHHHHHBC-SSCEEEEEECGGGCC
T ss_pred CCCCCEeEEEEcchHhhcc-------------------------------CHHHHHHHHHHHhC-CcEEEEEEcCCchhH
Confidence 7899999999999999974 44588999999999 999999988765432
Q ss_pred cccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEeecC---c--ccccc--cHHHHh
Q 037735 201 PLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKMTNP---K--QQVLC--SASDLA 273 (329)
Q Consensus 201 ~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~~~~---~--~~~~~--~~~~~~ 273 (329)
.. .....+..+ .. ..+ .++++.+++. .+++. ||++++.+.+..+ | +.+.. .+..+.
T Consensus 138 ~~---~~~~~~~~~---~~---~~~------~~~~~~~~~~-~l~~a-GF~~v~~~~~~~p~~~~~~~~~~~~~~~~~~~ 200 (261)
T 3ege_A 138 RI---WLYDYFPFL---WE---DAL------RFLPLDEQIN-LLQEN-TKRRVEAIPFLLPHDLSDLFAAAAWRRPELYL 200 (261)
T ss_dssp CC---GGGGTCHHH---HH---HHH------TSCCHHHHHH-HHHHH-HCSEEEEEECCEETTCSBCCTTTTTTCGGGGG
T ss_pred HH---HHHHHHHHH---hh---hhh------hhCCCHHHHH-HHHHc-CCCceeEEEecCCCcCcchhhHHhccCchhhc
Confidence 11 111111111 11 112 5678999999 88888 5998888876332 2 11110 122222
Q ss_pred hhHhhhhhhHHhhhcChHHHHHHHHHHHHHHH
Q 037735 274 VAMRAVYEGLVKEHFGDEFVDKIFNHFATKAE 305 (329)
Q Consensus 274 ~~iRa~~e~~~~~~~g~~~~d~~f~ry~~~~~ 305 (329)
..........+ ..++++-++.+.++.++.+.
T Consensus 201 ~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~l~ 231 (261)
T 3ege_A 201 KAEVRAGISSF-ALANQDLVEKGLELLTADLN 231 (261)
T ss_dssp SHHHHHTSHHH-HHSCHHHHHHHHHHHHHHHH
T ss_pred Ccchhccccce-eecCHHHHHHHHHHHHHHHh
Confidence 22222111111 23467777777777665553
No 21
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.37 E-value=4.4e-12 Score=112.31 Aligned_cols=163 Identities=17% Similarity=0.161 Sum_probs=111.2
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCc--------ceeeecc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSR--------SYYAAGV 112 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~--------~~f~~gv 112 (329)
++..+|+|+|||+|..+..+.. . ..+++..|+........-+.+.... .-|..+
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~--------~---------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~- 90 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELAS--------K---------GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVE- 90 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHH--------T---------TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEEC-
T ss_pred CCCCeEEEECCCCCHHHHHHHh--------C---------CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEe-
Confidence 3467999999999999988864 1 2589999998777666555443211 123443
Q ss_pred ccccccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEE
Q 037735 113 PGSFYSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALV 192 (329)
Q Consensus 113 pgsFy~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~ 192 (329)
++..-.+|++++|+|+++.++|++.+.. +...+|+...+.|+|||+|+++
T Consensus 91 --d~~~~~~~~~~~D~v~~~~~l~~~~~~~----------------------------~~~~~l~~~~~~L~pgG~l~~~ 140 (235)
T 3sm3_A 91 --NASSLSFHDSSFDFAVMQAFLTSVPDPK----------------------------ERSRIIKEVFRVLKPGAYLYLV 140 (235)
T ss_dssp --CTTSCCSCTTCEEEEEEESCGGGCCCHH----------------------------HHHHHHHHHHHHEEEEEEEEEE
T ss_pred --cccccCCCCCceeEEEEcchhhcCCCHH----------------------------HHHHHHHHHHHHcCCCeEEEEE
Confidence 4545457899999999999999975422 3447899999999999999999
Q ss_pred ecccCCCCcccCCcccchHHHHHHHHHHHHhcCCcCCC-------c--ccCCCHHHHHHHHHhCCceEEeEEEEee
Q 037735 193 MFSVPDGIPLVNNAAGSFYNTFGSCLVELTKMGILSKE-------K--MYNPTPKELEGIIQRNGNFTIERMEKMT 259 (329)
Q Consensus 193 ~~g~~~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~-------~--~y~ps~eE~~~~i~~~g~f~i~~~e~~~ 259 (329)
.+++....+. +.......+......|..... . .++.+.+|+.+++++. ||+++.++...
T Consensus 141 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~a-Gf~~~~~~~~~ 208 (235)
T 3sm3_A 141 EFGQNWHLKL-------YRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFTEKELVFLLTDC-RFEIDYFRVKE 208 (235)
T ss_dssp EEBCCTTSHH-------HHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBCHHHHHHHHHTT-TEEEEEEEEEE
T ss_pred ECCcchhHHH-------HHHHhhhhccchhhhcceEecccccCCcceeeEeCCHHHHHHHHHHc-CCEEEEEEecc
Confidence 9987653221 112222222222222321111 1 4678999999999998 59999988653
No 22
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.36 E-value=1.9e-12 Score=116.62 Aligned_cols=153 Identities=16% Similarity=0.214 Sum_probs=104.5
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC---CCcceeeeccccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP---QSRSYYAAGVPGSFY 117 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~---~~~~~f~~gvpgsFy 117 (329)
.+..+|+|+|||+|..+..+.. . . .+++..|+...+....-+.+. ...-.|..+ ++.
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~--------~-------~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~---d~~ 79 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSP--------Y-------V--QECIGVDATKEMVEVASSFAQEKGVENVRFQQG---TAE 79 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGG--------G-------S--SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEEC---BTT
T ss_pred CCCCEEEEEccCcCHHHHHHHH--------h-------C--CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEec---ccc
Confidence 4567999999999999887753 1 1 279999998776655433321 111234443 564
Q ss_pred cccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccC
Q 037735 118 SSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVP 197 (329)
Q Consensus 118 ~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~ 197 (329)
...++++++|+|+++.++||+.+ ...+|+..++.|+|||++++.....+
T Consensus 80 ~~~~~~~~fD~v~~~~~l~~~~~-------------------------------~~~~l~~~~~~LkpgG~l~~~~~~~~ 128 (239)
T 1xxl_A 80 SLPFPDDSFDIITCRYAAHHFSD-------------------------------VRKAVREVARVLKQDGRFLLVDHYAP 128 (239)
T ss_dssp BCCSCTTCEEEEEEESCGGGCSC-------------------------------HHHHHHHHHHHEEEEEEEEEEEECBC
T ss_pred cCCCCCCcEEEEEECCchhhccC-------------------------------HHHHHHHHHHHcCCCcEEEEEEcCCC
Confidence 54578899999999999999754 34789999999999999999877654
Q ss_pred CCCcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEee
Q 037735 198 DGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKMT 259 (329)
Q Consensus 198 ~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~~ 259 (329)
+.. ..+.+...+..+. .+ ....+.+.+++.+++++.| |++..+....
T Consensus 129 ~~~---------~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~ll~~aG-f~~~~~~~~~ 175 (239)
T 1xxl_A 129 EDP---------VLDEFVNHLNRLR-DP----SHVRESSLSEWQAMFSANQ-LAYQDIQKWN 175 (239)
T ss_dssp SSH---------HHHHHHHHHHHHH-CT----TCCCCCBHHHHHHHHHHTT-EEEEEEEEEE
T ss_pred CCh---------hHHHHHHHHHHhc-cc----cccCCCCHHHHHHHHHHCC-CcEEEEEeec
Confidence 321 1222222222221 11 0134568999999999985 9998887764
No 23
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.35 E-value=5.6e-12 Score=116.17 Aligned_cols=157 Identities=16% Similarity=0.263 Sum_probs=107.0
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC----Ccceeeecccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ----SRSYYAAGVPGSF 116 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~----~~~~f~~gvpgsF 116 (329)
.++.+|+|+|||+|..+..+.. . ..+++..|+...+....-+.+.. .+.-|+.+ ++
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~~--------~---------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~---d~ 126 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMAE--------R---------GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHC---AA 126 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHHH--------T---------TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEES---CG
T ss_pred CCCCEEEEeCCcchHHHHHHHH--------C---------CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEc---CH
Confidence 4467999999999999888864 1 25899999987776665444321 11224444 56
Q ss_pred cccc-CCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecc
Q 037735 117 YSSL-FPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFS 195 (329)
Q Consensus 117 y~~l-fp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g 195 (329)
.+.. ++++++|+|+++.++||+.+ ...+|+..++.|+|||++++..+.
T Consensus 127 ~~~~~~~~~~fD~v~~~~~l~~~~~-------------------------------~~~~l~~~~~~LkpgG~l~~~~~~ 175 (285)
T 4htf_A 127 QDVASHLETPVDLILFHAVLEWVAD-------------------------------PRSVLQTLWSVLRPGGVLSLMFYN 175 (285)
T ss_dssp GGTGGGCSSCEEEEEEESCGGGCSC-------------------------------HHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred HHhhhhcCCCceEEEECchhhcccC-------------------------------HHHHHHHHHHHcCCCeEEEEEEeC
Confidence 4444 68899999999999999753 347899999999999999999987
Q ss_pred cCCCCcccCCcccchHHHHHHHHHHHHhcCCcCCCc-----ccCCCHHHHHHHHHhCCceEEeEEEEee
Q 037735 196 VPDGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEK-----MYNPTPKELEGIIQRNGNFTIERMEKMT 259 (329)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~-----~y~ps~eE~~~~i~~~g~f~i~~~e~~~ 259 (329)
+.... ....+...|..+ ..+...... .++.+++|+.++++.. ||+++..+.+.
T Consensus 176 ~~~~~---------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a-Gf~v~~~~~~~ 233 (285)
T 4htf_A 176 AHGLL---------MHNMVAGNFDYV-QAGMPKKKKRTLSPDYPRDPTQVYLWLEEA-GWQIMGKTGVR 233 (285)
T ss_dssp HHHHH---------HHHHHTTCHHHH-HTTCCCC----CCCSCCBCHHHHHHHHHHT-TCEEEEEEEES
T ss_pred CchHH---------HHHHHhcCHHHH-hhhccccccccCCCCCCCCHHHHHHHHHHC-CCceeeeeeEE
Confidence 54310 001111112222 222211111 4667999999999999 59999888764
No 24
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.34 E-value=1.6e-11 Score=112.30 Aligned_cols=161 Identities=15% Similarity=0.197 Sum_probs=106.7
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC---CCCcceeeeccccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL---PQSRSYYAAGVPGSFY 117 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l---~~~~~~f~~gvpgsFy 117 (329)
.+..+|+|+|||+|..+..+.. . .|..+++..|+..+.....-+.+ ......|..+ ++.
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~--------~-------~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~---d~~ 97 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAK--------N-------NPDAEITSIDISPESLEKARENTEKNGIKNVKFLQA---NIF 97 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHH--------H-------CTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEEC---CGG
T ss_pred CCCCeEEEecCCCCHHHHHHHH--------h-------CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEc---ccc
Confidence 4567999999999999988864 2 24468999999877666544332 1112234443 565
Q ss_pred cccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccC
Q 037735 118 SSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVP 197 (329)
Q Consensus 118 ~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~ 197 (329)
...+|++++|+|+++.++||+.+. ..+|+...+.|+|||++++......
T Consensus 98 ~~~~~~~~fD~v~~~~~l~~~~~~-------------------------------~~~l~~~~~~L~pgG~l~~~~~~~~ 146 (276)
T 3mgg_A 98 SLPFEDSSFDHIFVCFVLEHLQSP-------------------------------EEALKSLKKVLKPGGTITVIEGDHG 146 (276)
T ss_dssp GCCSCTTCEEEEEEESCGGGCSCH-------------------------------HHHHHHHHHHEEEEEEEEEEEECGG
T ss_pred cCCCCCCCeeEEEEechhhhcCCH-------------------------------HHHHHHHHHHcCCCcEEEEEEcCCC
Confidence 666889999999999999997543 3789999999999999999886543
Q ss_pred CCCcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEee
Q 037735 198 DGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKMT 259 (329)
Q Consensus 198 ~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~~ 259 (329)
+...... ..................| ....+.+++..++++. ||++++++...
T Consensus 147 ~~~~~~~--~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~l~~a-Gf~~v~~~~~~ 199 (276)
T 3mgg_A 147 SCYFHPE--GKKAIEAWNCLIRVQAYMK------GNSLVGRQIYPLLQES-GFEKIRVEPRM 199 (276)
T ss_dssp GCEEESC--CHHHHHHHHHHHHHHHHTT------CCTTGGGGHHHHHHHT-TCEEEEEEEEE
T ss_pred CceECCC--cHHHHHHHHHHHHHHHhcC------CCcchHHHHHHHHHHC-CCCeEEEeeEE
Confidence 3211000 0111111111111122223 3345778999999999 49999888653
No 25
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.32 E-value=9.3e-12 Score=110.83 Aligned_cols=146 Identities=16% Similarity=0.126 Sum_probs=102.7
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeeccccccccccC
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSSLF 121 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~lf 121 (329)
+..+|||+|||+|..+..+.. . .+ +++..|+........-+..+. .--|..+ ++ +.++
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~--------~-------~~--~v~gvD~s~~~~~~a~~~~~~-~v~~~~~---d~-~~~~ 99 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQE--------H-------FN--DITCVEASEEAISHAQGRLKD-GITYIHS---RF-EDAQ 99 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTT--------T-------CS--CEEEEESCHHHHHHHHHHSCS-CEEEEES---CG-GGCC
T ss_pred CCCcEEEECCCCCHHHHHHHH--------h-------CC--cEEEEeCCHHHHHHHHHhhhC-CeEEEEc---cH-HHcC
Confidence 346899999999999887753 1 22 689999988776666555543 2334443 55 3447
Q ss_pred CCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHH-HHhccCceEEEEecccCCCC
Q 037735 122 PKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRA-QELVPGGLAALVMFSVPDGI 200 (329)
Q Consensus 122 p~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra-~eL~pGG~l~~~~~g~~~~~ 200 (329)
|++++|+|+++.++|++.+. ..+|+..+ +.|+|||+|+++.+.....
T Consensus 100 ~~~~fD~v~~~~~l~~~~~~-------------------------------~~~l~~~~~~~LkpgG~l~i~~~~~~~~- 147 (250)
T 2p7i_A 100 LPRRYDNIVLTHVLEHIDDP-------------------------------VALLKRINDDWLAEGGRLFLVCPNANAV- 147 (250)
T ss_dssp CSSCEEEEEEESCGGGCSSH-------------------------------HHHHHHHHHTTEEEEEEEEEEEECTTCH-
T ss_pred cCCcccEEEEhhHHHhhcCH-------------------------------HHHHHHHHHHhcCCCCEEEEEcCChHHH-
Confidence 89999999999999997533 47899999 9999999999998765431
Q ss_pred cccCCcccchHHHHHHHHHHHHhcCCcCCC----------c-ccCCCHHHHHHHHHhCCceEEeEEEEe
Q 037735 201 PLVNNAAGSFYNTFGSCLVELTKMGILSKE----------K-MYNPTPKELEGIIQRNGNFTIERMEKM 258 (329)
Q Consensus 201 ~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~----------~-~y~ps~eE~~~~i~~~g~f~i~~~e~~ 258 (329)
..... . ..|..... . ..+.+.+++.+++++.| |++++.+.+
T Consensus 148 ----------~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~ 199 (250)
T 2p7i_A 148 ----------SRQIA-V-----KMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAG-LQVTYRSGI 199 (250)
T ss_dssp ----------HHHHH-H-----HTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTT-CEEEEEEEE
T ss_pred ----------HHHHH-H-----HcCccccchhcccccccccccccCCHHHHHHHHHHCC-CeEEEEeee
Confidence 10100 0 11222111 0 35579999999999984 999988865
No 26
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.31 E-value=1.5e-11 Score=115.27 Aligned_cols=151 Identities=11% Similarity=0.090 Sum_probs=105.1
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC---C-Ccceeeecccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP---Q-SRSYYAAGVPGSF 116 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~---~-~~~~f~~gvpgsF 116 (329)
.+..+|+|+|||+|..+..+.+. + ..+|+..|+........-+.+. - .+.-|..+ ++
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~--------~--------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~---d~ 176 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRR--------F--------GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVC---NM 176 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHH--------H--------CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEEC---CT
T ss_pred CCCCEEEEecCCCCHHHHHHHHH--------c--------CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEEC---Ch
Confidence 34579999999999999888752 1 1479999998766555433321 1 12334544 56
Q ss_pred ccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEeccc
Q 037735 117 YSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSV 196 (329)
Q Consensus 117 y~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~ 196 (329)
.+-.+|++++|+|+++.++||+. . ..+|+..++.|+|||++++.....
T Consensus 177 ~~~~~~~~~fD~V~~~~~l~~~~-~-------------------------------~~~l~~~~~~LkpgG~l~~~~~~~ 224 (312)
T 3vc1_A 177 LDTPFDKGAVTASWNNESTMYVD-L-------------------------------HDLFSEHSRFLKVGGRYVTITGCW 224 (312)
T ss_dssp TSCCCCTTCEEEEEEESCGGGSC-H-------------------------------HHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred hcCCCCCCCEeEEEECCchhhCC-H-------------------------------HHHHHHHHHHcCCCcEEEEEEccc
Confidence 55457899999999999999973 2 378999999999999999999876
Q ss_pred CCCCcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEee
Q 037735 197 PDGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKMT 259 (329)
Q Consensus 197 ~~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~~ 259 (329)
.+.... ....+..+...+ . ..+++.+++.+++++. ||+++.++.+.
T Consensus 225 ~~~~~~----~~~~~~~~~~~~------~------~~~~s~~~~~~~l~~a-Gf~~~~~~~~~ 270 (312)
T 3vc1_A 225 NPRYGQ----PSKWVSQINAHF------E------CNIHSRREYLRAMADN-RLVPHTIVDLT 270 (312)
T ss_dssp CTTTCS----CCHHHHHHHHHH------T------CCCCBHHHHHHHHHTT-TEEEEEEEECH
T ss_pred cccccc----hhHHHHHHHhhh------c------CCCCCHHHHHHHHHHC-CCEEEEEEeCC
Confidence 653211 011121111111 1 3568999999999988 59999888763
No 27
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.31 E-value=1.1e-11 Score=111.84 Aligned_cols=163 Identities=15% Similarity=0.154 Sum_probs=105.6
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeeccccccccccC
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSSLF 121 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~lf 121 (329)
+..+|||+|||+|..+..+.+ . .+ -+++..|+........-+........|..+ ++..-.+
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~--------~-------~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~---d~~~~~~ 104 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAE--------H-------GA-KKVLGIDLSERMLTEAKRKTTSPVVCYEQK---AIEDIAI 104 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHH--------T-------TC-SEEEEEESCHHHHHHHHHHCCCTTEEEEEC---CGGGCCC
T ss_pred CCCEEEEECCCCCHHHHHHHH--------c-------CC-CEEEEEECCHHHHHHHHHhhccCCeEEEEc---chhhCCC
Confidence 568999999999998888864 1 12 279999998777666555544222334444 5655457
Q ss_pred CCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCCCCc
Q 037735 122 PKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPDGIP 201 (329)
Q Consensus 122 p~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~~~~ 201 (329)
|++++|+|+++.++||+. |...+|+..++.|+|||++++++..+.....
T Consensus 105 ~~~~fD~v~~~~~l~~~~-------------------------------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~ 153 (253)
T 3g5l_A 105 EPDAYNVVLSSLALHYIA-------------------------------SFDDICKKVYINLKSSGSFIFSVEHPVFTAD 153 (253)
T ss_dssp CTTCEEEEEEESCGGGCS-------------------------------CHHHHHHHHHHHEEEEEEEEEEEECHHHHSS
T ss_pred CCCCeEEEEEchhhhhhh-------------------------------hHHHHHHHHHHHcCCCcEEEEEeCCCccccC
Confidence 899999999999999974 3458899999999999999999764321000
Q ss_pred c------cCCcccchHHHHHHHHHHHHhcCCcC-----CCc-ccCCCHHHHHHHHHhCCceEEeEEEEeec
Q 037735 202 L------VNNAAGSFYNTFGSCLVELTKMGILS-----KEK-MYNPTPKELEGIIQRNGNFTIERMEKMTN 260 (329)
Q Consensus 202 ~------~~~~~~~~~~~l~~a~~~l~~eG~i~-----~~~-~y~ps~eE~~~~i~~~g~f~i~~~e~~~~ 260 (329)
. ...+....+ .|.....++... +.. .|.+|.+|+.+++++.| |+++.++...+
T Consensus 154 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~l~~aG-F~~~~~~e~~~ 218 (253)
T 3g5l_A 154 GRQDWYTDETGNKLHW-----PVDRYFNESMRTSHFLGEDVQKYHRTVTTYIQTLLKNG-FQINSVIEPEP 218 (253)
T ss_dssp SSCSCEECSSCCEEEE-----EECCTTCCCEEEEEETTEEEEEECCCHHHHHHHHHHTT-EEEEEEECCCC
T ss_pred ccccceeccCCceEEE-----EeccccccceEEEeeccccCccEecCHHHHHHHHHHcC-CeeeeeecCCC
Confidence 0 000000000 000000111100 011 56679999999999995 99998886544
No 28
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.30 E-value=1.6e-11 Score=108.22 Aligned_cols=145 Identities=14% Similarity=0.131 Sum_probs=105.3
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC---CCcceeeeccccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP---QSRSYYAAGVPGSFY 117 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~---~~~~~f~~gvpgsFy 117 (329)
.+..+|+|+|||+|.++..+.... .|..+++..|+........-+.+. ..+-.|..+ ++.
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~--------------~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~---d~~ 98 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYLSKMV--------------GEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKS---EEN 98 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHHHHHH--------------TTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEEC---BTT
T ss_pred CCCCEEEEEecCCCHHHHHHHHHh--------------CCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEec---ccc
Confidence 345799999999999999987522 345689999998776655544331 112234443 565
Q ss_pred cccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccC
Q 037735 118 SSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVP 197 (329)
Q Consensus 118 ~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~ 197 (329)
...++++++|+|+++.++||+.+ ...+|+..++.|+|||.+++..+...
T Consensus 99 ~~~~~~~~fD~v~~~~~l~~~~~-------------------------------~~~~l~~~~~~LkpgG~l~i~~~~~~ 147 (219)
T 3dh0_A 99 KIPLPDNTVDFIFMAFTFHELSE-------------------------------PLKFLEELKRVAKPFAYLAIIDWKKE 147 (219)
T ss_dssp BCSSCSSCEEEEEEESCGGGCSS-------------------------------HHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred cCCCCCCCeeEEEeehhhhhcCC-------------------------------HHHHHHHHHHHhCCCeEEEEEEeccc
Confidence 55588999999999999999743 34789999999999999999987765
Q ss_pred CCCcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEeec
Q 037735 198 DGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKMTN 260 (329)
Q Consensus 198 ~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~~~ 260 (329)
...... . .....+.+++...+++.| |++++......
T Consensus 148 ~~~~~~---------------------~-----~~~~~~~~~~~~~l~~~G-f~~~~~~~~~~ 183 (219)
T 3dh0_A 148 ERDKGP---------------------P-----PEEVYSEWEVGLILEDAG-IRVGRVVEVGK 183 (219)
T ss_dssp CCSSSC---------------------C-----GGGSCCHHHHHHHHHHTT-CEEEEEEEETT
T ss_pred ccccCC---------------------c-----hhcccCHHHHHHHHHHCC-CEEEEEEeeCC
Confidence 432100 0 034568999999999995 99988776543
No 29
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.30 E-value=2.8e-11 Score=108.06 Aligned_cols=149 Identities=15% Similarity=0.188 Sum_probs=104.7
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeecccccccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSSL 120 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~l 120 (329)
++..+|+|+|||+|.++..+.. . ..+++..|+........-+.....+..|..+ ++.+..
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~--------~---------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~---d~~~~~ 111 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSR--------T---------GYKAVGVDISEVMIQKGKERGEGPDLSFIKG---DLSSLP 111 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHH--------T---------TCEEEEEESCHHHHHHHHTTTCBTTEEEEEC---BTTBCS
T ss_pred CCCCeEEEEcCCCCHHHHHHHH--------c---------CCeEEEEECCHHHHHHHHhhcccCCceEEEc---chhcCC
Confidence 3457999999999999988864 1 1479999998766665544432222334444 565555
Q ss_pred CCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCCCC
Q 037735 121 FPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPDGI 200 (329)
Q Consensus 121 fp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~~~ 200 (329)
+|++++|+|+++.++||+.+ ...+|+..++.|+|||+++++.+++....
T Consensus 112 ~~~~~fD~v~~~~~l~~~~~-------------------------------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~ 160 (242)
T 3l8d_A 112 FENEQFEAIMAINSLEWTEE-------------------------------PLRALNEIKRVLKSDGYACIAILGPTAKP 160 (242)
T ss_dssp SCTTCEEEEEEESCTTSSSC-------------------------------HHHHHHHHHHHEEEEEEEEEEEECTTCGG
T ss_pred CCCCCccEEEEcChHhhccC-------------------------------HHHHHHHHHHHhCCCeEEEEEEcCCcchh
Confidence 78999999999999999743 34789999999999999999998766432
Q ss_pred cccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEe
Q 037735 201 PLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKM 258 (329)
Q Consensus 201 ~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~ 258 (329)
... .+ ..+..... .....+++++..++++. +|++++.+.+
T Consensus 161 ~~~------~~-------~~~~~~~~----~~~~~~~~~~~~~l~~~-Gf~~~~~~~~ 200 (242)
T 3l8d_A 161 REN------SY-------PRLYGKDV----VCNTMMPWEFEQLVKEQ-GFKVVDGIGV 200 (242)
T ss_dssp GGG------GG-------GGGGTCCC----SSCCCCHHHHHHHHHHT-TEEEEEEEEE
T ss_pred hhh------hh-------hhhccccc----cccCCCHHHHHHHHHHc-CCEEEEeecc
Confidence 110 00 11111110 04557899999999998 4999988765
No 30
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.30 E-value=3.1e-11 Score=111.47 Aligned_cols=159 Identities=16% Similarity=0.205 Sum_probs=104.9
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC---C-cceeeecccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ---S-RSYYAAGVPGSF 116 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~---~-~~~f~~gvpgsF 116 (329)
.+..+|+|+|||||..|..+.+ ++. .|..+|+..|+...+....-+.+.. . +--|+.| ++
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~--------~~~-----~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~---D~ 132 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRR--------NIH-----HDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEG---DI 132 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHH--------TCC-----SSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES---CT
T ss_pred CCCCEEEEEeCCCCHHHHHHHH--------hcC-----CCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeec---cc
Confidence 3457999999999999988875 211 3557899999998887765444321 1 2235554 45
Q ss_pred ccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEeccc
Q 037735 117 YSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSV 196 (329)
Q Consensus 117 y~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~ 196 (329)
.+ +|.+++|+++|+++|||+.. .|...+|+..++.|+|||+|+++-...
T Consensus 133 ~~--~~~~~~d~v~~~~~l~~~~~-----------------------------~~~~~~l~~i~~~LkpGG~lii~e~~~ 181 (261)
T 4gek_A 133 RD--IAIENASMVVLNFTLQFLEP-----------------------------SERQALLDKIYQGLNPGGALVLSEKFS 181 (261)
T ss_dssp TT--CCCCSEEEEEEESCGGGSCH-----------------------------HHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred cc--ccccccccceeeeeeeecCc-----------------------------hhHhHHHHHHHHHcCCCcEEEEEeccC
Confidence 33 35567999999999999742 245578999999999999999987654
Q ss_pred CCCCcccCCcccchHHHHHHHHHHHH-hcCCcCCCc----------ccCCCHHHHHHHHHhCCceEEeEE
Q 037735 197 PDGIPLVNNAAGSFYNTFGSCLVELT-KMGILSKEK----------MYNPTPKELEGIIQRNGNFTIERM 255 (329)
Q Consensus 197 ~~~~~~~~~~~~~~~~~l~~a~~~l~-~eG~i~~~~----------~y~ps~eE~~~~i~~~g~f~i~~~ 255 (329)
..... ..+.+...+.+.. ..|.-..+- +...|.+|+.+.+++.| |+.+.+
T Consensus 182 ~~~~~--------~~~~~~~~~~~~~~~~g~s~~ei~~~~~~l~~~~~~~s~~~~~~~L~~AG-F~~ve~ 242 (261)
T 4gek_A 182 FEDAK--------VGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARLHKAG-FEHSEL 242 (261)
T ss_dssp CSSHH--------HHHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCBCHHHHHHHHHHHT-CSEEEE
T ss_pred CCCHH--------HHHHHHHHHHHHHHHcCCCHHHHHHHHhhhcccccCCCHHHHHHHHHHcC-CCeEEE
Confidence 43211 1222333333332 234322221 34468999999999985 876543
No 31
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.30 E-value=1.2e-10 Score=109.05 Aligned_cols=161 Identities=12% Similarity=0.147 Sum_probs=103.5
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC----Ccceeeecccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ----SRSYYAAGVPGSF 116 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~----~~~~f~~gvpgsF 116 (329)
.+..+|+|+|||+|..+..+.+ .+ ..+|+..|+........-+.+.. ...-+..+ ++
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~--------~~--------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~---d~ 149 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVE--------RF--------DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQ---GW 149 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHH--------HH--------CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES---CG
T ss_pred CCcCEEEEEcccchHHHHHHHH--------HC--------CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC---Ch
Confidence 3457999999999999888875 21 14799999987776655443321 11234443 44
Q ss_pred ccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEeccc
Q 037735 117 YSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSV 196 (329)
Q Consensus 117 y~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~ 196 (329)
..+ | +++|+|+|+.++|++.. .|...+|+...+.|+|||++++..+..
T Consensus 150 -~~~-~-~~fD~v~~~~~l~~~~~-----------------------------~~~~~~l~~~~~~LkpgG~l~~~~~~~ 197 (318)
T 2fk8_A 150 -EDF-A-EPVDRIVSIEAFEHFGH-----------------------------ENYDDFFKRCFNIMPADGRMTVQSSVS 197 (318)
T ss_dssp -GGC-C-CCCSEEEEESCGGGTCG-----------------------------GGHHHHHHHHHHHSCTTCEEEEEEEEC
T ss_pred -HHC-C-CCcCEEEEeChHHhcCH-----------------------------HHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 222 4 89999999999999742 256688999999999999999999987
Q ss_pred CCCCcccCCcccchHH--HHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEee
Q 037735 197 PDGIPLVNNAAGSFYN--TFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKMT 259 (329)
Q Consensus 197 ~~~~~~~~~~~~~~~~--~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~~ 259 (329)
.+............+. ....-+....-.| .++|+.+++.+.+++. +|++++.+.+.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~s~~~~~~~l~~a-Gf~~~~~~~~~ 255 (318)
T 2fk8_A 198 YHPYEMAARGKKLSFETARFIKFIVTEIFPG------GRLPSTEMMVEHGEKA-GFTVPEPLSLR 255 (318)
T ss_dssp CCHHHHHTTCHHHHHHHHHHHHHHHHHTSTT------CCCCCHHHHHHHHHHT-TCBCCCCEECH
T ss_pred CCchhhhhccccccccccchhhHHHHhcCCC------CcCCCHHHHHHHHHhC-CCEEEEEEecc
Confidence 6522110000000000 0111111111122 4668999999999998 49998777653
No 32
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.28 E-value=2.7e-11 Score=108.37 Aligned_cols=139 Identities=14% Similarity=0.162 Sum_probs=103.3
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCC----cceeeeccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQS----RSYYAAGVPGSFY 117 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~----~~~f~~gvpgsFy 117 (329)
++.+|||+|||+|.++..+.. +..+|+..|+........-+.+... +--|..+ ++.
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~-----------------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~---d~~ 125 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMAS-----------------PERFVVGLDISESALAKANETYGSSPKAEYFSFVKE---DVF 125 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCB-----------------TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECC---CTT
T ss_pred CCCCEEEeCCCCCHHHHHHHh-----------------CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEEC---chh
Confidence 346999999999999887742 2368999999887766665554331 1234443 563
Q ss_pred cccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccC
Q 037735 118 SSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVP 197 (329)
Q Consensus 118 ~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~ 197 (329)
.+.|++++|+|+++.++||+.. .|...+|+..++.|+|||+|++..+...
T Consensus 126 -~~~~~~~fD~v~~~~~l~~~~~-----------------------------~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 175 (235)
T 3lcc_A 126 -TWRPTELFDLIFDYVFFCAIEP-----------------------------EMRPAWAKSMYELLKPDGELITLMYPIT 175 (235)
T ss_dssp -TCCCSSCEEEEEEESSTTTSCG-----------------------------GGHHHHHHHHHHHEEEEEEEEEEECCCS
T ss_pred -cCCCCCCeeEEEEChhhhcCCH-----------------------------HHHHHHHHHHHHHCCCCcEEEEEEeccc
Confidence 4557889999999999999741 2556889999999999999999887655
Q ss_pred CCCcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEee
Q 037735 198 DGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKMT 259 (329)
Q Consensus 198 ~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~~ 259 (329)
.... |. .|..+.+++.+++++. +|+++.++...
T Consensus 176 ~~~~-----------------------~~-----~~~~~~~~~~~~l~~~-Gf~~~~~~~~~ 208 (235)
T 3lcc_A 176 DHVG-----------------------GP-----PYKVDVSTFEEVLVPI-GFKAVSVEENP 208 (235)
T ss_dssp CCCS-----------------------CS-----SCCCCHHHHHHHHGGG-TEEEEEEEECT
T ss_pred ccCC-----------------------CC-----CccCCHHHHHHHHHHc-CCeEEEEEecC
Confidence 3210 11 4557899999999988 49999988764
No 33
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.26 E-value=3.7e-11 Score=104.75 Aligned_cols=142 Identities=16% Similarity=0.108 Sum_probs=105.7
Q ss_pred ceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeeccccccccccCC
Q 037735 43 TFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSSLFP 122 (329)
Q Consensus 43 ~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~lfp 122 (329)
..+|+|+|||+|.++..+.. . ..+++..|+...+....-+..+. .-|.. +++.+-.+|
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~--------~---------~~~v~gvD~s~~~~~~a~~~~~~--~~~~~---~d~~~~~~~ 99 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLAS--------L---------GHQIEGLEPATRLVELARQTHPS--VTFHH---GTITDLSDS 99 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHH--------T---------TCCEEEECCCHHHHHHHHHHCTT--SEEEC---CCGGGGGGS
T ss_pred CCeEEEecCCCCHHHHHHHh--------c---------CCeEEEEeCCHHHHHHHHHhCCC--CeEEe---CcccccccC
Confidence 57899999999999888864 1 14799999987776665554432 23444 356554578
Q ss_pred CCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCCCCcc
Q 037735 123 KSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPDGIPL 202 (329)
Q Consensus 123 ~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~~~~~ 202 (329)
++++|+|+++.++||+.. .|...+|+..++.|+|||+++++.+..+.....
T Consensus 100 ~~~fD~v~~~~~l~~~~~-----------------------------~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~ 150 (203)
T 3h2b_A 100 PKRWAGLLAWYSLIHMGP-----------------------------GELPDALVALRMAVEDGGGLLMSFFSGPSLEPM 150 (203)
T ss_dssp CCCEEEEEEESSSTTCCT-----------------------------TTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEE
T ss_pred CCCeEEEEehhhHhcCCH-----------------------------HHHHHHHHHHHHHcCCCcEEEEEEccCCchhhh
Confidence 899999999999999752 255688999999999999999999877653221
Q ss_pred cCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEee
Q 037735 203 VNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKMT 259 (329)
Q Consensus 203 ~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~~ 259 (329)
... ... .++.+.+++.+++++.| |+++.++...
T Consensus 151 ~~~-----------------~~~------~~~~~~~~~~~~l~~~G-f~~~~~~~~~ 183 (203)
T 3h2b_A 151 YHP-----------------VAT------AYRWPLPELAQALETAG-FQVTSSHWDP 183 (203)
T ss_dssp CCS-----------------SSC------EEECCHHHHHHHHHHTT-EEEEEEEECT
T ss_pred hch-----------------hhh------hccCCHHHHHHHHHHCC-CcEEEEEecC
Confidence 100 001 56689999999999984 9999988764
No 34
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.26 E-value=4.9e-11 Score=104.45 Aligned_cols=152 Identities=13% Similarity=0.070 Sum_probs=101.1
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeeccccccccccC
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSSLF 121 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~lf 121 (329)
...+|+|+|||+|.++..+... ..+++..|+........-+ ....+..|..+ ++.. ++
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~-----------------~~~v~~~D~s~~~~~~a~~-~~~~~~~~~~~---d~~~-~~ 103 (218)
T 3ou2_A 46 IRGDVLELASGTGYWTRHLSGL-----------------ADRVTALDGSAEMIAEAGR-HGLDNVEFRQQ---DLFD-WT 103 (218)
T ss_dssp SCSEEEEESCTTSHHHHHHHHH-----------------SSEEEEEESCHHHHHHHGG-GCCTTEEEEEC---CTTS-CC
T ss_pred CCCeEEEECCCCCHHHHHHHhc-----------------CCeEEEEeCCHHHHHHHHh-cCCCCeEEEec---cccc-CC
Confidence 3459999999999999888641 1479999998766555544 22112334443 5643 48
Q ss_pred CCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCCCCc
Q 037735 122 PKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPDGIP 201 (329)
Q Consensus 122 p~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~~~~ 201 (329)
|++++|+|+++.++||+.+ .++..+|+..++.|+|||.++++.++++....
T Consensus 104 ~~~~~D~v~~~~~l~~~~~-----------------------------~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~ 154 (218)
T 3ou2_A 104 PDRQWDAVFFAHWLAHVPD-----------------------------DRFEAFWESVRSAVAPGGVVEFVDVTDHERRL 154 (218)
T ss_dssp CSSCEEEEEEESCGGGSCH-----------------------------HHHHHHHHHHHHHEEEEEEEEEEEECCCC---
T ss_pred CCCceeEEEEechhhcCCH-----------------------------HHHHHHHHHHHHHcCCCeEEEEEeCCCCcccc
Confidence 9999999999999999653 13558899999999999999999998753211
Q ss_pred ccCCcccchHHHHHHHHHHHHhc---CCcCCCc-----ccCCCHHHHHHHHHhCCceEEeEEEEe
Q 037735 202 LVNNAAGSFYNTFGSCLVELTKM---GILSKEK-----MYNPTPKELEGIIQRNGNFTIERMEKM 258 (329)
Q Consensus 202 ~~~~~~~~~~~~l~~a~~~l~~e---G~i~~~~-----~y~ps~eE~~~~i~~~g~f~i~~~e~~ 258 (329)
. ..+...... ..+.... ..+++++|+.++++.. +|+++..+..
T Consensus 155 ~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a-Gf~v~~~~~~ 205 (218)
T 3ou2_A 155 E-------------QQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTAL-GWSCSVDEVH 205 (218)
T ss_dssp ----------------------CEEEEECTTSCEEEEECCCCCHHHHHHHHHHT-TEEEEEEEEE
T ss_pred c-------------hhhhcccccceeeecCCcchhhHhhcCCCHHHHHHHHHHC-CCEEEeeecc
Confidence 0 000100000 1111111 2367999999999998 4998777654
No 35
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.25 E-value=2.9e-11 Score=106.78 Aligned_cols=141 Identities=9% Similarity=0.084 Sum_probs=99.1
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC---------------Cc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ---------------SR 105 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~---------------~~ 105 (329)
++..+|||+|||+|.++..+.+ + ..+|+..|+...+.....+.... .+
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~--------~---------g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~ 83 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSG--------Q---------GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPG 83 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHH--------H---------CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSS
T ss_pred CCCCEEEEeCCCCcHhHHHHHH--------C---------CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCc
Confidence 3457999999999999998864 1 15899999999887776554321 12
Q ss_pred ceeeeccccccccccCCC-CceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhc
Q 037735 106 SYYAAGVPGSFYSSLFPK-SSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELV 184 (329)
Q Consensus 106 ~~f~~gvpgsFy~~lfp~-~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~ 184 (329)
--|..| ++.+-.+++ +++|+|++..++|++.. .|...+++..++.|+
T Consensus 84 v~~~~~---d~~~l~~~~~~~fD~v~~~~~l~~l~~-----------------------------~~~~~~l~~~~r~Lk 131 (203)
T 1pjz_A 84 IEIWCG---DFFALTARDIGHCAAFYDRAAMIALPA-----------------------------DMRERYVQHLEALMP 131 (203)
T ss_dssp SEEEEE---CCSSSTHHHHHSEEEEEEESCGGGSCH-----------------------------HHHHHHHHHHHHHSC
T ss_pred cEEEEC---ccccCCcccCCCEEEEEECcchhhCCH-----------------------------HHHHHHHHHHHHHcC
Confidence 234444 565444554 79999999999999641 144578999999999
Q ss_pred cCceEEEEecccCCCCcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEee
Q 037735 185 PGGLAALVMFSVPDGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKMT 259 (329)
Q Consensus 185 pGG~l~~~~~g~~~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~~ 259 (329)
|||++++.++..+... ..|. .+..+.+|+.+.++. +|++..++...
T Consensus 132 pgG~~~l~~~~~~~~~----------------------~~~~-----~~~~~~~el~~~~~~--gf~i~~~~~~~ 177 (203)
T 1pjz_A 132 QACSGLLITLEYDQAL----------------------LEGP-----PFSVPQTWLHRVMSG--NWEVTKVGGQD 177 (203)
T ss_dssp SEEEEEEEEESSCSSS----------------------SSSC-----CCCCCHHHHHHTSCS--SEEEEEEEESS
T ss_pred CCcEEEEEEEecCccc----------------------cCCC-----CCCCCHHHHHHHhcC--CcEEEEecccc
Confidence 9999666654432110 0010 344689999999886 59998888754
No 36
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.24 E-value=8.9e-11 Score=109.66 Aligned_cols=166 Identities=11% Similarity=0.016 Sum_probs=110.5
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCC----cceeeecccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQS----RSYYAAGVPGSF 116 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~----~~~f~~gvpgsF 116 (329)
.+..+|+|+|||+|..+..+... . .|..+|+..|+........-+.+... +--|+. +++
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~-------~-------~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~---~d~ 179 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYS-------A-------CPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHR---QDA 179 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCT-------T-------CTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEE---CCG
T ss_pred CCCCEEEEecCCCCHHHHHHHHh-------c-------CCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEE---Cch
Confidence 44678999999999988877410 1 45579999999877766655544321 123444 467
Q ss_pred ccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEeccc
Q 037735 117 YSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSV 196 (329)
Q Consensus 117 y~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~ 196 (329)
.+-.++ +++|+|+++.++||+.+.. ....+|+..++.|+|||+++++.+++
T Consensus 180 ~~~~~~-~~fD~v~~~~~~~~~~~~~----------------------------~~~~~l~~~~~~LkpgG~l~i~~~~~ 230 (305)
T 3ocj_A 180 WKLDTR-EGYDLLTSNGLNIYEPDDA----------------------------RVTELYRRFWQALKPGGALVTSFLTP 230 (305)
T ss_dssp GGCCCC-SCEEEEECCSSGGGCCCHH----------------------------HHHHHHHHHHHHEEEEEEEEEECCCC
T ss_pred hcCCcc-CCeEEEEECChhhhcCCHH----------------------------HHHHHHHHHHHhcCCCeEEEEEecCC
Confidence 555566 9999999999999965422 23368999999999999999999887
Q ss_pred CCCCcccCC-----cccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEe
Q 037735 197 PDGIPLVNN-----AAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKM 258 (329)
Q Consensus 197 ~~~~~~~~~-----~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~ 258 (329)
+........ ............+......+. ..+.+.+|+.+.+++.| |++++++..
T Consensus 231 ~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~aG-F~~v~~~~~ 291 (305)
T 3ocj_A 231 PPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRW-----NALRTHAQTRAQLEEAG-FTDLRFEDD 291 (305)
T ss_dssp CTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSC-----CCCCCHHHHHHHHHHTT-CEEEEEECC
T ss_pred CCcccccccceeeccccchhhhhhhHHHHHHhhhh-----hccCCHHHHHHHHHHCC-CEEEEEEcc
Confidence 653321111 000111122223333333331 35689999999999995 999888753
No 37
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.23 E-value=8.8e-11 Score=105.87 Aligned_cols=149 Identities=13% Similarity=-0.017 Sum_probs=100.5
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC---C-Ccceeeecccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP---Q-SRSYYAAGVPGSF 116 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~---~-~~~~f~~gvpgsF 116 (329)
.+..+|+|+|||+|..+..+.. .+ ..+++..|+...+....-+... . .+.-|.. +++
T Consensus 35 ~~~~~VLDiGcG~G~~~~~la~--------~~--------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~---~d~ 95 (256)
T 1nkv_A 35 KPGTRILDLGSGSGEMLCTWAR--------DH--------GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIH---NDA 95 (256)
T ss_dssp CTTCEEEEETCTTCHHHHHHHH--------HT--------CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE---SCC
T ss_pred CCCCEEEEECCCCCHHHHHHHH--------hc--------CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEE---CCh
Confidence 3457999999999999988875 21 1478999998766655433321 1 1223444 466
Q ss_pred ccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEeccc
Q 037735 117 YSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSV 196 (329)
Q Consensus 117 y~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~ 196 (329)
.+-.+ ++++|+|+|..++|++.+.+ .+|+..++.|+|||+|+++.+..
T Consensus 96 ~~~~~-~~~fD~V~~~~~~~~~~~~~-------------------------------~~l~~~~r~LkpgG~l~~~~~~~ 143 (256)
T 1nkv_A 96 AGYVA-NEKCDVAACVGATWIAGGFA-------------------------------GAEELLAQSLKPGGIMLIGEPYW 143 (256)
T ss_dssp TTCCC-SSCEEEEEEESCGGGTSSSH-------------------------------HHHHHHTTSEEEEEEEEEEEEEE
T ss_pred HhCCc-CCCCCEEEECCChHhcCCHH-------------------------------HHHHHHHHHcCCCeEEEEecCcc
Confidence 44334 88999999999999976543 77999999999999999987654
Q ss_pred CCCCcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEe
Q 037735 197 PDGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKM 258 (329)
Q Consensus 197 ~~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~ 258 (329)
...... ..+...| ......++++.+++.+.+++.| |+++.+...
T Consensus 144 ~~~~~~---------~~~~~~~--------~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~ 187 (256)
T 1nkv_A 144 RQLPAT---------EEIAQAC--------GVSSTSDFLTLPGLVGAFDDLG-YDVVEMVLA 187 (256)
T ss_dssp TTCCSS---------HHHHHTT--------TCSCGGGSCCHHHHHHHHHTTT-BCCCEEEEC
T ss_pred cCCCCh---------HHHHHHH--------hcccccccCCHHHHHHHHHHCC-CeeEEEEeC
Confidence 332111 0111111 1111146789999999999885 998776654
No 38
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.23 E-value=5.4e-11 Score=110.58 Aligned_cols=198 Identities=15% Similarity=0.134 Sum_probs=121.4
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC-----CCcceeeeccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP-----QSRSYYAAGVPGS 115 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~-----~~~~~f~~gvpgs 115 (329)
.+..+|+|+|||+|..+..+.+ .+ .+..+|+..|+........-+.+. ..+--|..+ +
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~--------~~------~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~---d 97 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQ--------EL------KPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKIS---S 97 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHH--------HS------SCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEEC---C
T ss_pred CCCCEEEEECCCCCHHHHHHHH--------hC------CCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEc---C
Confidence 3568999999999999998875 21 234689999998777665544321 112334444 4
Q ss_pred cccccCCC------CceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceE
Q 037735 116 FYSSLFPK------SSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLA 189 (329)
Q Consensus 116 Fy~~lfp~------~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l 189 (329)
+.+-.++. +++|+|+++.++||+ +. ..+|+..++.|+|||.|
T Consensus 98 ~~~~~~~~~~~~~~~~fD~V~~~~~l~~~-~~-------------------------------~~~l~~~~~~LkpgG~l 145 (299)
T 3g5t_A 98 SDDFKFLGADSVDKQKIDMITAVECAHWF-DF-------------------------------EKFQRSAYANLRKDGTI 145 (299)
T ss_dssp TTCCGGGCTTTTTSSCEEEEEEESCGGGS-CH-------------------------------HHHHHHHHHHEEEEEEE
T ss_pred HHhCCccccccccCCCeeEEeHhhHHHHh-CH-------------------------------HHHHHHHHHhcCCCcEE
Confidence 54444666 899999999999998 43 37899999999999999
Q ss_pred EEEecccCCCCcccCCcccchHHHHHHHHHHHHhcCCcCCCcccC--CCHHHHHHHHHhCCce-----EEeEEEEeecC-
Q 037735 190 ALVMFSVPDGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYN--PTPKELEGIIQRNGNF-----TIERMEKMTNP- 261 (329)
Q Consensus 190 ~~~~~g~~~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~--ps~eE~~~~i~~~g~f-----~i~~~e~~~~~- 261 (329)
++..++.+...... .+...+..+....- .-..|. |..+.+.+.+++.| | +-++...+.+.
T Consensus 146 ~i~~~~~~~~~~~~---------~~~~~~~~~~~~~~--~~~~~w~~p~~~~~~~~l~~~g-fp~~~f~~v~~~~~~~~~ 213 (299)
T 3g5t_A 146 AIWGYADPIFPDYP---------EFDDLMIEVPYGKQ--GLGPYWEQPGRSRLRNMLKDSH-LDPELFHDIQVSYFCAED 213 (299)
T ss_dssp EEEEEEEEECTTCG---------GGTTHHHHHHHCTT--TTGGGSCTTHHHHHHTTTTTCC-CCTTTEEEEEEEEECGGG
T ss_pred EEEecCCccccCcH---------HHHHHHHHhccCcc--cccchhhchhhHHHHHhhhccC-CChHHcCcceEEEecccc
Confidence 99777643221100 11122233321100 001455 78888888888775 5 44444444321
Q ss_pred cc---------------cccccHHHHhhhHhhhhhh-HHhh--hcCh--HHHHHHHHH
Q 037735 262 KQ---------------QVLCSASDLAVAMRAVYEG-LVKE--HFGD--EFVDKIFNH 299 (329)
Q Consensus 262 ~~---------------~~~~~~~~~~~~iRa~~e~-~~~~--~~g~--~~~d~~f~r 299 (329)
|. ...++...+..++|+++.- .... .-++ ++++++.++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t~s~~~~~~~~~~~~~~~~~~~~~~~~ 271 (299)
T 3g5t_A 214 VRDKVKLHQHTKKPLLIRKQVTLVEFADYVRTWSAYHQWKQDPKNKDKEDVADWFIKE 271 (299)
T ss_dssp GGCHHHHHHCSSCCCCCEEEECHHHHHHHHTTSHHHHHHHHCGGGTTSCCHHHHHHHH
T ss_pred cccccccccCCCCceeeeccccHHHHHHHHHHhHHHHHHHhcccCCchhhHHHHHHHH
Confidence 11 1123567888999987642 1122 2233 677776665
No 39
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.21 E-value=9.7e-11 Score=113.43 Aligned_cols=150 Identities=17% Similarity=0.154 Sum_probs=101.1
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC-----------CCCcceeee
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL-----------PQSRSYYAA 110 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l-----------~~~~~~f~~ 110 (329)
+..+|||+|||+|..+..+.+.. .|..+|+..|+...+....-+.+ ...+--|..
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~--------------~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~ 148 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLV--------------GEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLK 148 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH--------------TTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEE
T ss_pred CCCEEEEecCccCHHHHHHHHHh--------------CCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEE
Confidence 45799999999999998887522 24468999999877766554432 112233555
Q ss_pred ccccccccc------cCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhc
Q 037735 111 GVPGSFYSS------LFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELV 184 (329)
Q Consensus 111 gvpgsFy~~------lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~ 184 (329)
+ ++.+- .+|++++|+|+|+.++||+.+ ...+|+..++.|+
T Consensus 149 ~---d~~~l~~~~~~~~~~~~fD~V~~~~~l~~~~d-------------------------------~~~~l~~~~r~Lk 194 (383)
T 4fsd_A 149 G---FIENLATAEPEGVPDSSVDIVISNCVCNLSTN-------------------------------KLALFKEIHRVLR 194 (383)
T ss_dssp S---CTTCGGGCBSCCCCTTCEEEEEEESCGGGCSC-------------------------------HHHHHHHHHHHEE
T ss_pred c---cHHHhhhcccCCCCCCCEEEEEEccchhcCCC-------------------------------HHHHHHHHHHHcC
Confidence 4 45433 678999999999999999653 3488999999999
Q ss_pred cCceEEEEecccCCCCcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEE
Q 037735 185 PGGLAALVMFSVPDGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERME 256 (329)
Q Consensus 185 pGG~l~~~~~g~~~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e 256 (329)
|||+|+++.+..+..... .+.. ...+..... ....+.+++.+++++.| |++.++.
T Consensus 195 pgG~l~i~~~~~~~~~~~----------~~~~-~~~~~~~~~-----~~~~~~~~~~~ll~~aG-F~~v~~~ 249 (383)
T 4fsd_A 195 DGGELYFSDVYADRRLSE----------AAQQ-DPILYGECL-----GGALYLEDFRRLVAEAG-FRDVRLV 249 (383)
T ss_dssp EEEEEEEEEEEESSCCCH----------HHHH-CHHHHHTTC-----TTCCBHHHHHHHHHHTT-CCCEEEE
T ss_pred CCCEEEEEEeccccccCH----------hHhh-hHHHhhccc-----ccCCCHHHHHHHHHHCC-CceEEEE
Confidence 999999998876542211 0000 011111111 23457799999998885 8765443
No 40
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.21 E-value=3.4e-11 Score=106.04 Aligned_cols=149 Identities=14% Similarity=0.131 Sum_probs=103.2
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeecccccccc--
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYS-- 118 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~-- 118 (329)
.+..+|+|+|||+|..+..+.. .+ .+++..|+........-+... -+..+ ++..
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~----------------~~-~~~~~~D~~~~~~~~~~~~~~----~~~~~---d~~~~~ 86 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKE----------------NG-TRVSGIEAFPEAAEQAKEKLD----HVVLG---DIETMD 86 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHT----------------TT-CEEEEEESSHHHHHHHHTTSS----EEEES---CTTTCC
T ss_pred cCCCcEEEeCCCCCHHHHHHHh----------------cC-CeEEEEeCCHHHHHHHHHhCC----cEEEc---chhhcC
Confidence 3467999999999999988763 22 589999998766555443332 23333 4433
Q ss_pred ccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCC
Q 037735 119 SLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPD 198 (329)
Q Consensus 119 ~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~ 198 (329)
..+|++++|+|+++.++|++.+. ..+|+...+.|+|||.++++++....
T Consensus 87 ~~~~~~~fD~v~~~~~l~~~~~~-------------------------------~~~l~~~~~~L~~gG~l~~~~~~~~~ 135 (230)
T 3cc8_A 87 MPYEEEQFDCVIFGDVLEHLFDP-------------------------------WAVIEKVKPYIKQNGVILASIPNVSH 135 (230)
T ss_dssp CCSCTTCEEEEEEESCGGGSSCH-------------------------------HHHHHHTGGGEEEEEEEEEEEECTTS
T ss_pred CCCCCCccCEEEECChhhhcCCH-------------------------------HHHHHHHHHHcCCCCEEEEEeCCcch
Confidence 44678999999999999997532 37899999999999999999866443
Q ss_pred CCcccCCcccchHHHHHHHHHHHHhc-------CCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEeecC
Q 037735 199 GIPLVNNAAGSFYNTFGSCLVELTKM-------GILSKEKMYNPTPKELEGIIQRNGNFTIERMEKMTNP 261 (329)
Q Consensus 199 ~~~~~~~~~~~~~~~l~~a~~~l~~e-------G~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~~~~ 261 (329)
. ..+ ..+... |.++.....+.+.+++.+++++.| |++++.+.....
T Consensus 136 ~------------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~~~ 188 (230)
T 3cc8_A 136 I------------SVL----APLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAG-YSISKVDRVYVD 188 (230)
T ss_dssp H------------HHH----HHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTT-EEEEEEEEEECC
T ss_pred H------------HHH----HHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcC-CeEEEEEecccC
Confidence 1 111 111111 111111146679999999999994 999998877543
No 41
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.20 E-value=3.2e-11 Score=108.52 Aligned_cols=146 Identities=14% Similarity=0.154 Sum_probs=102.9
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCC-cceeeeccccccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQS-RSYYAAGVPGSFYSS 119 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~-~~~f~~gvpgsFy~~ 119 (329)
.+..+|+|+|||+|..+..+.... ..+++..|+...+....-+.+... ..-|.. +++..-
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~----------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~---~d~~~~ 152 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKL----------------YATTDLLEPVKHMLEEAKRELAGMPVGKFIL---ASMETA 152 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHH----------------CSEEEEEESCHHHHHHHHHHTTTSSEEEEEE---SCGGGC
T ss_pred cCCCEEEEECCCcCHHHHHHHHhh----------------cCEEEEEeCCHHHHHHHHHHhccCCceEEEE---ccHHHC
Confidence 356899999999999998887521 136899999877766655554321 123444 356554
Q ss_pred cCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCCC
Q 037735 120 LFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPDG 199 (329)
Q Consensus 120 lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~~ 199 (329)
.+|++++|+|+++.++|++++ .|+..+|+..++.|+|||+++++.......
T Consensus 153 ~~~~~~fD~v~~~~~l~~~~~-----------------------------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~ 203 (254)
T 1xtp_A 153 TLPPNTYDLIVIQWTAIYLTD-----------------------------ADFVKFFKHCQQALTPNGYIFFKENCSTGD 203 (254)
T ss_dssp CCCSSCEEEEEEESCGGGSCH-----------------------------HHHHHHHHHHHHHEEEEEEEEEEEEBC--C
T ss_pred CCCCCCeEEEEEcchhhhCCH-----------------------------HHHHHHHHHHHHhcCCCeEEEEEecCCCcc
Confidence 578899999999999999742 256688999999999999999998643321
Q ss_pred CcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEe
Q 037735 200 IPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKM 258 (329)
Q Consensus 200 ~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~ 258 (329)
... . . ...+ .++++.+++.+++++.| |++++.+..
T Consensus 204 ~~~--------~-------~--~~~~------~~~~~~~~~~~~l~~aG-f~~~~~~~~ 238 (254)
T 1xtp_A 204 RFL--------V-------D--KEDS------SLTRSDIHYKRLFNESG-VRVVKEAFQ 238 (254)
T ss_dssp CEE--------E-------E--TTTT------EEEBCHHHHHHHHHHHT-CCEEEEEEC
T ss_pred cce--------e-------c--ccCC------cccCCHHHHHHHHHHCC-CEEEEeeec
Confidence 110 0 0 0011 45679999999999984 999887764
No 42
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.20 E-value=1.8e-10 Score=106.86 Aligned_cols=157 Identities=13% Similarity=0.106 Sum_probs=103.7
Q ss_pred CceEEEeeeCCC---CcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCC-cceeeeccccccc
Q 037735 42 NTFRIADFGCST---GPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQS-RSYYAAGVPGSFY 117 (329)
Q Consensus 42 ~~~~IaDlGCst---G~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~-~~~f~~gvpgsFy 117 (329)
...+|||+|||+ |..+..+.. . .|..+|+..|+...+....-+.+... +--|+.| ++.
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~--------~-------~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~---D~~ 138 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQS--------V-------NPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTA---DVR 138 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHH--------H-------CTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEEC---CTT
T ss_pred CCCEEEEECCCCCCCChHHHHHHH--------h-------CCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEe---eCC
Confidence 347999999999 965443321 2 35579999999877766655444321 2335554 554
Q ss_pred c-----------ccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccC
Q 037735 118 S-----------SLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPG 186 (329)
Q Consensus 118 ~-----------~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pG 186 (329)
+ ..++.+++|+++++.+|||+++- |...+|+..++.|+||
T Consensus 139 ~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~-----------------------------~~~~~l~~~~~~L~pG 189 (274)
T 2qe6_A 139 DPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPD-----------------------------VVDRVVGAYRDALAPG 189 (274)
T ss_dssp CHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTT-----------------------------THHHHHHHHHHHSCTT
T ss_pred CchhhhccchhhccCCCCCCEEEEEechhhhCCcH-----------------------------HHHHHHHHHHHhCCCC
Confidence 2 23555689999999999998642 2457899999999999
Q ss_pred ceEEEEecccCCCCcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEeecC-ccc
Q 037735 187 GLAALVMFSVPDGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKMTNP-KQQ 264 (329)
Q Consensus 187 G~l~~~~~g~~~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~~~~-~~~ 264 (329)
|+|+++.+..+. .. .+..+...+... ..+ .++++.+|+.+.+ . +|++......... |..
T Consensus 190 G~l~i~~~~~~~-~~--------~~~~~~~~~~~~-~~~------~~~~s~~ei~~~l--~-G~~l~~~g~~~~~~w~p 249 (274)
T 2qe6_A 190 SYLFMTSLVDTG-LP--------AQQKLARITREN-LGE------GWARTPEEIERQF--G-DFELVEPGVVYTALWRP 249 (274)
T ss_dssp CEEEEEEEBCSS-CH--------HHHHHHHHHHHH-HSC------CCCBCHHHHHHTT--T-TCEECTTCSEEGGGSSC
T ss_pred cEEEEEEecCcc-hH--------HHHHHHHHHHhc-CCC------CccCCHHHHHHHh--C-CCeEccCcEeccccccC
Confidence 999999988643 11 122233333322 223 5678999999998 3 5988764433333 543
No 43
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.20 E-value=1.4e-11 Score=107.72 Aligned_cols=150 Identities=11% Similarity=0.112 Sum_probs=100.8
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC---CC-cceeeeccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP---QS-RSYYAAGVPGSFY 117 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~---~~-~~~f~~gvpgsFy 117 (329)
++.+|+|+|||+|..+..+.. .|..+++..|+........-+.+. .. +..|..+ ++.
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~----------------~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~---d~~ 103 (219)
T 3dlc_A 43 TAGTCIDIGSGPGALSIALAK----------------QSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQG---DVH 103 (219)
T ss_dssp CEEEEEEETCTTSHHHHHHHH----------------HSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEEC---BTT
T ss_pred CCCEEEEECCCCCHHHHHHHH----------------cCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEc---CHH
Confidence 344999999999999888874 123689999998766655444321 11 2234443 565
Q ss_pred cccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccC
Q 037735 118 SSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVP 197 (329)
Q Consensus 118 ~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~ 197 (329)
+..+|++++|+|+++.++||+. |...+|+..++.|+|||.++++..-.+
T Consensus 104 ~~~~~~~~~D~v~~~~~l~~~~-------------------------------~~~~~l~~~~~~L~pgG~l~~~~~~~~ 152 (219)
T 3dlc_A 104 NIPIEDNYADLIVSRGSVFFWE-------------------------------DVATAFREIYRILKSGGKTYIGGGFGN 152 (219)
T ss_dssp BCSSCTTCEEEEEEESCGGGCS-------------------------------CHHHHHHHHHHHEEEEEEEEEEECCSS
T ss_pred HCCCCcccccEEEECchHhhcc-------------------------------CHHHHHHHHHHhCCCCCEEEEEeccCc
Confidence 5558899999999999999974 334789999999999999999863322
Q ss_pred CCCcccCCcccchHHHHHHH-------HHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEe
Q 037735 198 DGIPLVNNAAGSFYNTFGSC-------LVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKM 258 (329)
Q Consensus 198 ~~~~~~~~~~~~~~~~l~~a-------~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~ 258 (329)
. .+.+.+... |....... ....+.+++.+++++.| |++.++...
T Consensus 153 ~----------~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~aG-f~~v~~~~~ 203 (219)
T 3dlc_A 153 K----------ELRDSISAEMIRKNPDWKEFNRKN------ISQENVERFQNVLDEIG-ISSYEIILG 203 (219)
T ss_dssp H----------HHHHHHHHHHHHHCTTHHHHHHHH------SSHHHHHHHHHHHHHHT-CSSEEEEEE
T ss_pred H----------HHHHHHHHHHHHhHHHHHhhhhhc------cccCCHHHHHHHHHHcC-CCeEEEEec
Confidence 1 112222222 22221112 33458899999999985 987766543
No 44
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.19 E-value=4.1e-11 Score=110.87 Aligned_cols=152 Identities=14% Similarity=0.116 Sum_probs=97.6
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCc-----------ceeee
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSR-----------SYYAA 110 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~-----------~~f~~ 110 (329)
+..+|||+|||+|..+..+.. .+..+|+..|+...+...+-+.+.... ..+..
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~----------------~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~ 134 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSAC----------------SHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIE 134 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGG----------------GGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhc----------------cCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhc
Confidence 457999999999995443321 112489999998877665433222100 00111
Q ss_pred c-------------------ccccccc-c-----cCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHH
Q 037735 111 G-------------------VPGSFYS-S-----LFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYA 165 (329)
Q Consensus 111 g-------------------vpgsFy~-~-----lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~ 165 (329)
| +.+++.. . -+|++++|+|+|+.++||+..-.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~----------------------- 191 (289)
T 2g72_A 135 GKGECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDL----------------------- 191 (289)
T ss_dssp CSCCCHHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSH-----------------------
T ss_pred CcccchhhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCH-----------------------
Confidence 1 1124433 1 25678899999999999975321
Q ss_pred HHHhhcHHHHHHHHHHHhccCceEEEEecccCCCCcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHH
Q 037735 166 AQFNNDFQTFLNTRAQELVPGGLAALVMFSVPDGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQ 245 (329)
Q Consensus 166 ~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~ 245 (329)
.|+..+|+..++.|+|||+|++...-..+.... ..+. ...++.+.+++.++++
T Consensus 192 ----~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~--------------------~~~~---~~~~~~~~~~l~~~l~ 244 (289)
T 2g72_A 192 ----ASFQRALDHITTLLRPGGHLLLIGALEESWYLA--------------------GEAR---LTVVPVSEEEVREALV 244 (289)
T ss_dssp ----HHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEE--------------------TTEE---EECCCCCHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHhcCCCCEEEEEEecCcceEEc--------------------CCee---eeeccCCHHHHHHHHH
Confidence 256788999999999999999985332221000 0000 0045679999999999
Q ss_pred hCCceEEeEEEEeec
Q 037735 246 RNGNFTIERMEKMTN 260 (329)
Q Consensus 246 ~~g~f~i~~~e~~~~ 260 (329)
+.| |+++.++.+..
T Consensus 245 ~aG-f~~~~~~~~~~ 258 (289)
T 2g72_A 245 RSG-YKVRDLRTYIM 258 (289)
T ss_dssp HTT-EEEEEEEEEEC
T ss_pred HcC-CeEEEeeEeec
Confidence 984 99999887653
No 45
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.19 E-value=3.3e-10 Score=103.33 Aligned_cols=164 Identities=12% Similarity=0.077 Sum_probs=101.5
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcc------hHHhhhhcCCC----Ccceeee
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDN------DFNTLFKSLPQ----SRSYYAA 110 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~n------dfn~lf~~l~~----~~~~f~~ 110 (329)
.+..+|+|+|||+|..+..+.... .|..+++..|+... .....-+.+.. .+-.|..
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~--------------g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~ 107 (275)
T 3bkx_A 42 KPGEKILEIGCGQGDLSAVLADQV--------------GSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHF 107 (275)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHH--------------CTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEEC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHh--------------CCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEE
Confidence 345799999999999999887522 23468999999765 44444333211 1123343
Q ss_pred ccccccc--cccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCce
Q 037735 111 GVPGSFY--SSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGL 188 (329)
Q Consensus 111 gvpgsFy--~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~ 188 (329)
+. .+. ...+|++++|+|+|+.++|++.+. ..+++...+-++|||+
T Consensus 108 ~d--~~~~~~~~~~~~~fD~v~~~~~l~~~~~~-------------------------------~~~~~~~~~l~~~gG~ 154 (275)
T 3bkx_A 108 NT--NLSDDLGPIADQHFDRVVLAHSLWYFASA-------------------------------NALALLFKNMAAVCDH 154 (275)
T ss_dssp SC--CTTTCCGGGTTCCCSEEEEESCGGGSSCH-------------------------------HHHHHHHHHHTTTCSE
T ss_pred CC--hhhhccCCCCCCCEEEEEEccchhhCCCH-------------------------------HHHHHHHHHHhCCCCE
Confidence 32 232 223678999999999999997542 2456666666667999
Q ss_pred EEEEecccCCCCcccCCcccchHHHHH-HHHHHHHhcCCcCCCc-ccCCCHHHHHHHHHhCCceEEeEEEEe
Q 037735 189 AALVMFSVPDGIPLVNNAAGSFYNTFG-SCLVELTKMGILSKEK-MYNPTPKELEGIIQRNGNFTIERMEKM 258 (329)
Q Consensus 189 l~~~~~g~~~~~~~~~~~~~~~~~~l~-~a~~~l~~eG~i~~~~-~y~ps~eE~~~~i~~~g~f~i~~~e~~ 258 (329)
+++..+..+...+. ....++..+. ..+......+ ... ..+++.+++.+++++. +|++++.+.+
T Consensus 155 l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~s~~~l~~~l~~a-Gf~~~~~~~~ 219 (275)
T 3bkx_A 155 VDVAEWSMQPTALD---QIGHLQAAMIQGLLYAIAPSD---VANIRTLITPDTLAQIAHDN-TWTYTAGTIV 219 (275)
T ss_dssp EEEEEECSSCSSGG---GHHHHHHHHHHHHHHHHSCCT---TCSCCCCCCHHHHHHHHHHH-TCEEEECCCB
T ss_pred EEEEEecCCCCchh---hhhHHHHHHHHHHHhhccccc---cccccccCCHHHHHHHHHHC-CCeeEEEEEe
Confidence 99999876543221 0111121121 1122111111 011 4578999999999998 4999888766
No 46
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.19 E-value=1.1e-10 Score=104.03 Aligned_cols=161 Identities=21% Similarity=0.240 Sum_probs=103.1
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeeccccccccccC
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSSLF 121 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~lf 121 (329)
+..+|+|+|||+|..+..+.+ + .+ .+++..|+........-+.....+.-+.. +++.+..+
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~--------~-------~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~---~d~~~~~~ 103 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHE--------H-------GA-SYVLGLDLSEKMLARARAAGPDTGITYER---ADLDKLHL 103 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHH--------T-------TC-SEEEEEESCHHHHHHHHHTSCSSSEEEEE---CCGGGCCC
T ss_pred CCCEEEEEcCcCCHHHHHHHH--------C-------CC-CeEEEEcCCHHHHHHHHHhcccCCceEEE---cChhhccC
Confidence 457999999999999887764 1 11 27999999877766655555432223444 35655557
Q ss_pred CCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCCCCc
Q 037735 122 PKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPDGIP 201 (329)
Q Consensus 122 p~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~~~~ 201 (329)
|++++|+|+++.++||+.+ ...+|+..++.|+|||+++++++.+.....
T Consensus 104 ~~~~fD~v~~~~~l~~~~~-------------------------------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~ 152 (243)
T 3bkw_A 104 PQDSFDLAYSSLALHYVED-------------------------------VARLFRTVHQALSPGGHFVFSTEHPIYMAP 152 (243)
T ss_dssp CTTCEEEEEEESCGGGCSC-------------------------------HHHHHHHHHHHEEEEEEEEEEEECHHHHCC
T ss_pred CCCCceEEEEeccccccch-------------------------------HHHHHHHHHHhcCcCcEEEEEeCCcccccC
Confidence 8899999999999999743 347899999999999999999864321000
Q ss_pred ccC------Cc-----ccchHH--HHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEeec
Q 037735 202 LVN------NA-----AGSFYN--TFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKMTN 260 (329)
Q Consensus 202 ~~~------~~-----~~~~~~--~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~~~ 260 (329)
... .+ ....+. .....| + .++. ..|+++.+|+.+++++.| |+++.++...+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~----~~~~~t~~~~~~~l~~aG-F~~~~~~~~~~ 216 (243)
T 3bkw_A 153 ARPGWAIDAEGRRTWPIDRYLVEGPRKTDW--L-AKGV----VKHHRTVGTTLNALIRSG-FAIEHVEEFCP 216 (243)
T ss_dssp SSCSCEECTTSCEEEEECCTTCCEEECTTH--H-HHSC----CEEECCHHHHHHHHHHTT-CEEEEEEECCC
T ss_pred cCcceeecCCCceEEeecccccccceeeee--c-cCce----EEEeccHHHHHHHHHHcC-CEeeeeccCCC
Confidence 000 00 000000 000000 0 0010 155679999999999994 99998876543
No 47
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.18 E-value=2.7e-11 Score=106.45 Aligned_cols=154 Identities=12% Similarity=0.094 Sum_probs=98.6
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeecccccccccc-
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSSL- 120 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~l- 120 (329)
.+.+|+|+|||+|.++..+.+ . ..+++..|+........-+. + ...+..+.-.++-...
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~--------~---------~~~v~~vD~s~~~~~~a~~~-~--~~~~~~~~~~~~~~~~~ 111 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALAD--------R---------GIEAVGVDGDRTLVDAARAA-G--AGEVHLASYAQLAEAKV 111 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHT--------T---------TCEEEEEESCHHHHHHHHHT-C--SSCEEECCHHHHHTTCS
T ss_pred CCCEEEEeCCCCCHHHHHHHH--------C---------CCEEEEEcCCHHHHHHHHHh-c--ccccchhhHHhhccccc
Confidence 458999999999999887763 1 25799999987766555443 2 1223333211221223
Q ss_pred CCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCCCC
Q 037735 121 FPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPDGI 200 (329)
Q Consensus 121 fp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~~~ 200 (329)
.+.+++|+|+++.++| ..+ ...+|+..++.|+|||+|+++.+.+....
T Consensus 112 ~~~~~fD~v~~~~~l~-~~~-------------------------------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~ 159 (227)
T 3e8s_A 112 PVGKDYDLICANFALL-HQD-------------------------------IIELLSAMRTLLVPGGALVIQTLHPWSVA 159 (227)
T ss_dssp CCCCCEEEEEEESCCC-SSC-------------------------------CHHHHHHHHHTEEEEEEEEEEECCTTTTC
T ss_pred ccCCCccEEEECchhh-hhh-------------------------------HHHHHHHHHHHhCCCeEEEEEecCccccC
Confidence 3455699999999999 332 24789999999999999999998765432
Q ss_pred cccCCcccchHHHHHHHHHHHHhcCCcCC--Cc-ccCCCHHHHHHHHHhCCceEEeEEEEe
Q 037735 201 PLVNNAAGSFYNTFGSCLVELTKMGILSK--EK-MYNPTPKELEGIIQRNGNFTIERMEKM 258 (329)
Q Consensus 201 ~~~~~~~~~~~~~l~~a~~~l~~eG~i~~--~~-~y~ps~eE~~~~i~~~g~f~i~~~e~~ 258 (329)
.. ..... |....-.+.... .. .++++.+|+.+++++. ||++++++..
T Consensus 160 ~~-~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a-Gf~~~~~~~~ 209 (227)
T 3e8s_A 160 DG-DYQDG---------WREESFAGFAGDWQPMPWYFRTLASWLNALDMA-GLRLVSLQEP 209 (227)
T ss_dssp TT-CCSCE---------EEEECCTTSSSCCCCEEEEECCHHHHHHHHHHT-TEEEEEEECC
T ss_pred cc-ccccc---------cchhhhhccccCcccceEEEecHHHHHHHHHHc-CCeEEEEecC
Confidence 10 00000 000000011111 01 6778999999999999 4999988763
No 48
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.17 E-value=5.7e-10 Score=98.85 Aligned_cols=141 Identities=14% Similarity=0.102 Sum_probs=95.1
Q ss_pred ceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeeccccccccccCC
Q 037735 43 TFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSSLFP 122 (329)
Q Consensus 43 ~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~lfp 122 (329)
..+|+|+|||+|.++..+.. . +..|+........-+. ..-+.. +++....++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~--------------------~-~~vD~s~~~~~~a~~~----~~~~~~---~d~~~~~~~ 99 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKI--------------------K-IGVEPSERMAEIARKR----GVFVLK---GTAENLPLK 99 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTC--------------------C-EEEESCHHHHHHHHHT----TCEEEE---CBTTBCCSC
T ss_pred CCcEEEeCCCCCHHHHHHHH--------------------H-hccCCCHHHHHHHHhc----CCEEEE---cccccCCCC
Confidence 57999999999999887742 1 6677766555444332 112333 345444478
Q ss_pred CCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCCCCcc
Q 037735 123 KSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPDGIPL 202 (329)
Q Consensus 123 ~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~~~~~ 202 (329)
++++|+|+++.++||+.+ ...+|+..++.|+|||.++++.+.+.+
T Consensus 100 ~~~fD~v~~~~~l~~~~~-------------------------------~~~~l~~~~~~L~pgG~l~i~~~~~~~---- 144 (219)
T 1vlm_A 100 DESFDFALMVTTICFVDD-------------------------------PERALKEAYRILKKGGYLIVGIVDRES---- 144 (219)
T ss_dssp TTCEEEEEEESCGGGSSC-------------------------------HHHHHHHHHHHEEEEEEEEEEEECSSS----
T ss_pred CCCeeEEEEcchHhhccC-------------------------------HHHHHHHHHHHcCCCcEEEEEEeCCcc----
Confidence 889999999999999743 347899999999999999999876543
Q ss_pred cCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEe
Q 037735 203 VNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKM 258 (329)
Q Consensus 203 ~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~ 258 (329)
.+. ..+..+ ..+........+.+.+++.+++++.| |+++.+...
T Consensus 145 -------~~~---~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~G-f~~~~~~~~ 188 (219)
T 1vlm_A 145 -------FLG---REYEKN-KEKSVFYKNARFFSTEELMDLMRKAG-FEEFKVVQT 188 (219)
T ss_dssp -------HHH---HHHHHT-TTC-CCSTTCCCCCHHHHHHHHHHTT-CEEEEEEEE
T ss_pred -------HHH---HHHHHH-hcCcchhcccccCCHHHHHHHHHHCC-CeEEEEecc
Confidence 111 111111 11211111145579999999999984 999887764
No 49
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.16 E-value=3.4e-10 Score=103.91 Aligned_cols=141 Identities=10% Similarity=0.060 Sum_probs=100.7
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC-------------------
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP------------------- 102 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~------------------- 102 (329)
+..+|||+|||+|.++..+.+ + ..+|+..|+...+.....+...
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~--------~---------G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~ 130 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFAD--------R---------GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKS 130 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHH--------T---------TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEE
T ss_pred CCCeEEEeCCCCcHHHHHHHH--------C---------CCeEEEEECCHHHHHHHHHhccccccccccccccccccccc
Confidence 457999999999999988874 1 1589999999888776654432
Q ss_pred -CCcceeeeccccccccccCCC-CceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHH
Q 037735 103 -QSRSYYAAGVPGSFYSSLFPK-SSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRA 180 (329)
Q Consensus 103 -~~~~~f~~gvpgsFy~~lfp~-~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra 180 (329)
..+--|..| ++.+-.+++ +++|+|++..+++++.. .|...+++..+
T Consensus 131 ~~~~i~~~~~---D~~~l~~~~~~~FD~V~~~~~l~~l~~-----------------------------~~~~~~l~~~~ 178 (252)
T 2gb4_A 131 SSGSISLYCC---SIFDLPRANIGKFDRIWDRGALVAINP-----------------------------GDHDRYADIIL 178 (252)
T ss_dssp TTSSEEEEES---CTTTGGGGCCCCEEEEEESSSTTTSCG-----------------------------GGHHHHHHHHH
T ss_pred CCCceEEEEC---ccccCCcccCCCEEEEEEhhhhhhCCH-----------------------------HHHHHHHHHHH
Confidence 012234444 675544543 89999999999999741 14557899999
Q ss_pred HHhccCceEEEEecccCCCCcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEeec
Q 037735 181 QELVPGGLAALVMFSVPDGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKMTN 260 (329)
Q Consensus 181 ~eL~pGG~l~~~~~g~~~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~~~ 260 (329)
+.|+|||+|++.++..+.... .|- .+..+++|+.+.++.. |+++.++....
T Consensus 179 ~~LkpGG~l~l~~~~~~~~~~----------------------~g~-----~~~~~~~el~~~l~~~--f~v~~~~~~~~ 229 (252)
T 2gb4_A 179 SLLRKEFQYLVAVLSYDPTKH----------------------AGP-----PFYVPSAELKRLFGTK--CSMQCLEEVDA 229 (252)
T ss_dssp HTEEEEEEEEEEEEECCTTSC----------------------CCS-----SCCCCHHHHHHHHTTT--EEEEEEEEEEC
T ss_pred HHcCCCeEEEEEEEecCCccC----------------------CCC-----CCCCCHHHHHHHhhCC--eEEEEEecccc
Confidence 999999999877655332100 011 3446899999999863 99999886643
No 50
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.15 E-value=7e-11 Score=106.18 Aligned_cols=144 Identities=15% Similarity=0.113 Sum_probs=103.0
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCC---cceeeecccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQS---RSYYAAGVPGSFYS 118 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~---~~~f~~gvpgsFy~ 118 (329)
+..+|+|+|||+|..+..+.+ + . ..+++..|+...+....-+.+... ..-|..+ ++..
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~--------~-------~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~---d~~~ 139 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLL--------P-------L-FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCC---GLQD 139 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTT--------T-------T-CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEEC---CGGG
T ss_pred CCCEEEEECCCCCHHHHHHHH--------h-------c-CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEc---Chhh
Confidence 467999999999999888764 1 1 147999999877766655544321 1224443 5655
Q ss_pred ccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCC
Q 037735 119 SLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPD 198 (329)
Q Consensus 119 ~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~ 198 (329)
-.++++++|+|+++.++|++.+ .++..+|+..++.|+|||+|+++.+...+
T Consensus 140 ~~~~~~~fD~v~~~~~l~~~~~-----------------------------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 190 (241)
T 2ex4_A 140 FTPEPDSYDVIWIQWVIGHLTD-----------------------------QHLAEFLRRCKGSLRPNGIIVIKDNMAQE 190 (241)
T ss_dssp CCCCSSCEEEEEEESCGGGSCH-----------------------------HHHHHHHHHHHHHEEEEEEEEEEEEEBSS
T ss_pred cCCCCCCEEEEEEcchhhhCCH-----------------------------HHHHHHHHHHHHhcCCCeEEEEEEccCCC
Confidence 5577789999999999999643 13458899999999999999998876554
Q ss_pred CCcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEe
Q 037735 199 GIPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKM 258 (329)
Q Consensus 199 ~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~ 258 (329)
.. .| .. ..+ .+.++.+++.+++++.| |++++.+..
T Consensus 191 ~~---------~~-------~~--~~~------~~~~~~~~~~~~l~~aG-f~~~~~~~~ 225 (241)
T 2ex4_A 191 GV---------IL-------DD--VDS------SVCRDLDVVRRIICSAG-LSLLAEERQ 225 (241)
T ss_dssp SE---------EE-------ET--TTT------EEEEBHHHHHHHHHHTT-CCEEEEEEC
T ss_pred cc---------ee-------cc--cCC------cccCCHHHHHHHHHHcC-CeEEEeeec
Confidence 11 11 00 011 45579999999999985 999888765
No 51
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.15 E-value=1.3e-10 Score=106.44 Aligned_cols=151 Identities=16% Similarity=0.144 Sum_probs=98.7
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCc-c-------eeee--
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSR-S-------YYAA-- 110 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~-~-------~f~~-- 110 (329)
.+..+|||+|||+|.++..+.. . .. -+|+..|+..++...+-+.+.... . .|++
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~--------~-------~~-~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~ 117 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAAC--------D-------SF-QDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACEL 117 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGG--------G-------TE-EEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHH--------h-------hh-cceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhc
Confidence 3457899999999988876642 1 11 269999999887776543221100 0 0000
Q ss_pred --------------------ccccccccc-cC---CCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHH
Q 037735 111 --------------------GVPGSFYSS-LF---PKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAA 166 (329)
Q Consensus 111 --------------------gvpgsFy~~-lf---p~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~ 166 (329)
.+.++..+. .+ +.+++|+|+|+.+|||+..-+
T Consensus 118 ~~~~~~~~~~~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~------------------------ 173 (263)
T 2a14_A 118 EGNSGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSL------------------------ 173 (263)
T ss_dssp TTCGGGHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSH------------------------
T ss_pred CCCCcchhhHHHHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCH------------------------
Confidence 122344332 22 257999999999999974321
Q ss_pred HHhhcHHHHHHHHHHHhccCceEEEEecccCCCCcccCCcccchHHHHHHHHHHHHhcCCcCCCc-ccCCCHHHHHHHHH
Q 037735 167 QFNNDFQTFLNTRAQELVPGGLAALVMFSVPDGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEK-MYNPTPKELEGIIQ 245 (329)
Q Consensus 167 q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~-~y~ps~eE~~~~i~ 245 (329)
.|+...|+..++.|+|||+|+++.....+... .| ...- .+..+.+|+.+.++
T Consensus 174 ---~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~----------------------~g--~~~~~~~~~~~~~l~~~l~ 226 (263)
T 2a14_A 174 ---DAYRAALCNLASLLKPGGHLVTTVTLRLPSYM----------------------VG--KREFSCVALEKGEVEQAVL 226 (263)
T ss_dssp ---HHHHHHHHHHHTTEEEEEEEEEEEESSCCEEE----------------------ET--TEEEECCCCCHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHcCCCcEEEEEEeecCccce----------------------eC--CeEeeccccCHHHHHHHHH
Confidence 26678899999999999999999764332100 01 0000 44569999999999
Q ss_pred hCCceEEeEEEEee
Q 037735 246 RNGNFTIERMEKMT 259 (329)
Q Consensus 246 ~~g~f~i~~~e~~~ 259 (329)
+.| |++++++...
T Consensus 227 ~aG-F~i~~~~~~~ 239 (263)
T 2a14_A 227 DAG-FDIEQLLHSP 239 (263)
T ss_dssp HTT-EEEEEEEEEC
T ss_pred HCC-CEEEEEeecc
Confidence 995 9999988763
No 52
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.15 E-value=8.5e-11 Score=103.21 Aligned_cols=140 Identities=17% Similarity=0.112 Sum_probs=100.5
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeeccccccccccC
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSSLF 121 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~lf 121 (329)
+..+|+|+|||+|.++..+.+ . ..+++..|+........-+... ..+.. +++. .+-
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~--------~---------~~~v~~vD~s~~~~~~a~~~~~---~~~~~---~d~~-~~~ 98 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLA--------A---------GFDVDATDGSPELAAEASRRLG---RPVRT---MLFH-QLD 98 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHH--------T---------TCEEEEEESCHHHHHHHHHHHT---SCCEE---CCGG-GCC
T ss_pred CCCcEEEECCCCCHHHHHHHH--------c---------CCeEEEECCCHHHHHHHHHhcC---CceEE---eeec-cCC
Confidence 457999999999999988864 1 1479999998776665544432 12233 3553 344
Q ss_pred CCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCCCCc
Q 037735 122 PKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPDGIP 201 (329)
Q Consensus 122 p~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~~~~ 201 (329)
+++++|+|+++.++|++.. .|+..+|+..++.|+|||++++++........
T Consensus 99 ~~~~fD~v~~~~~l~~~~~-----------------------------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~ 149 (211)
T 3e23_A 99 AIDAYDAVWAHACLLHVPR-----------------------------DELADVLKLIWRALKPGGLFYASYKSGEGEGR 149 (211)
T ss_dssp CCSCEEEEEECSCGGGSCH-----------------------------HHHHHHHHHHHHHEEEEEEEEEEEECCSSCEE
T ss_pred CCCcEEEEEecCchhhcCH-----------------------------HHHHHHHHHHHHhcCCCcEEEEEEcCCCcccc
Confidence 8999999999999999641 25668899999999999999999765433211
Q ss_pred ccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEe
Q 037735 202 LVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKM 258 (329)
Q Consensus 202 ~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~ 258 (329)
. ..... ..+.+.+++.+++++.|.|+++.++..
T Consensus 150 ~------------------~~~~~------~~~~~~~~~~~~l~~aG~f~~~~~~~~ 182 (211)
T 3e23_A 150 D------------------KLARY------YNYPSEEWLRARYAEAGTWASVAVESS 182 (211)
T ss_dssp C------------------TTSCE------ECCCCHHHHHHHHHHHCCCSEEEEEEE
T ss_pred c------------------ccchh------ccCCCHHHHHHHHHhCCCcEEEEEEec
Confidence 0 00000 556799999999998833999888765
No 53
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.14 E-value=2e-10 Score=100.71 Aligned_cols=134 Identities=16% Similarity=0.160 Sum_probs=92.7
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccc-eEEecCCCcchHHhhhhcCCCCcceeeecccccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEF-QVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSSL 120 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~-~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~l 120 (329)
+..+|+|+|||+|..+..+ . . +++..|+...+....-+..+ ..-+..+ ++.+-.
T Consensus 36 ~~~~vLdiG~G~G~~~~~l----------~----------~~~v~~vD~s~~~~~~a~~~~~--~~~~~~~---d~~~~~ 90 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL----------P----------YPQKVGVEPSEAMLAVGRRRAP--EATWVRA---WGEALP 90 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC----------C----------CSEEEEECCCHHHHHHHHHHCT--TSEEECC---CTTSCC
T ss_pred CCCeEEEECCCCCHhHHhC----------C----------CCeEEEEeCCHHHHHHHHHhCC--CcEEEEc---ccccCC
Confidence 5679999999999877655 1 3 78999998777666555442 1233333 454444
Q ss_pred CCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCCCC
Q 037735 121 FPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPDGI 200 (329)
Q Consensus 121 fp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~~~ 200 (329)
+|++++|+|+++.++||+.+ ...+|+..++.|+|||.++++++.+.+
T Consensus 91 ~~~~~fD~v~~~~~l~~~~~-------------------------------~~~~l~~~~~~L~pgG~l~i~~~~~~~-- 137 (211)
T 2gs9_A 91 FPGESFDVVLLFTTLEFVED-------------------------------VERVLLEARRVLRPGGALVVGVLEALS-- 137 (211)
T ss_dssp SCSSCEEEEEEESCTTTCSC-------------------------------HHHHHHHHHHHEEEEEEEEEEEECTTS--
T ss_pred CCCCcEEEEEEcChhhhcCC-------------------------------HHHHHHHHHHHcCCCCEEEEEecCCcC--
Confidence 78899999999999999753 347899999999999999999987653
Q ss_pred cccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHH
Q 037735 201 PLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQ 245 (329)
Q Consensus 201 ~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~ 245 (329)
.|..+ +..+...|........+.|++|++++++
T Consensus 138 ---------~~~~~---~~~~~~~~~~~~~~~~~~s~~~l~~~l~ 170 (211)
T 2gs9_A 138 ---------PWAAL---YRRLGEKGVLPWAQARFLAREDLKALLG 170 (211)
T ss_dssp ---------HHHHH---HHHHHHTTCTTGGGCCCCCHHHHHHHHC
T ss_pred ---------cHHHH---HHHHhhccCccccccccCCHHHHHHHhc
Confidence 12211 1222223311111155679999999998
No 54
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.13 E-value=1.3e-10 Score=105.52 Aligned_cols=106 Identities=15% Similarity=0.197 Sum_probs=78.4
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeecccccccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSSL 120 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~l 120 (329)
++..+|||+|||+|..+..+.. . . .+++..|+...+....-+.++. .-|..+ ++.+ +
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~--------~-------~--~~v~gvD~s~~~~~~a~~~~~~--~~~~~~---d~~~-~ 105 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLAD--------S-------F--GTVEGLELSADMLAIARRRNPD--AVLHHG---DMRD-F 105 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTT--------T-------S--SEEEEEESCHHHHHHHHHHCTT--SEEEEC---CTTT-C
T ss_pred CCCCcEEEeCCcCCHHHHHHHH--------c-------C--CeEEEEECCHHHHHHHHhhCCC--CEEEEC---ChHH-C
Confidence 4458999999999999888763 1 1 3799999987776665555442 234444 5543 3
Q ss_pred CCCCceeEEEecc-ceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccC
Q 037735 121 FPKSSLHFVHSSY-TLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVP 197 (329)
Q Consensus 121 fp~~s~dl~~Ss~-alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~ 197 (329)
.+++++|+|+++. ++||+... .|+..+|+..++.|+|||+|++.....+
T Consensus 106 ~~~~~fD~v~~~~~~l~~~~~~----------------------------~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 155 (263)
T 3pfg_A 106 SLGRRFSAVTCMFSSIGHLAGQ----------------------------AELDAALERFAAHVLPDGVVVVEPWWFP 155 (263)
T ss_dssp CCSCCEEEEEECTTGGGGSCHH----------------------------HHHHHHHHHHHHTEEEEEEEEECCCCCT
T ss_pred CccCCcCEEEEcCchhhhcCCH----------------------------HHHHHHHHHHHHhcCCCcEEEEEeccCh
Confidence 3378999999998 99997432 3667899999999999999999865443
No 55
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.13 E-value=1.8e-10 Score=107.79 Aligned_cols=108 Identities=14% Similarity=0.247 Sum_probs=78.2
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC----------Ccceeeec
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ----------SRSYYAAG 111 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~----------~~~~f~~g 111 (329)
+..+|+|+|||+|..+..+.. .+..+++..|+...+....-+.... .+.-|..+
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~----------------~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~ 97 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKK----------------GRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITA 97 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHH----------------TTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEEC
T ss_pred CCCEEEEECCCCcHHHHHHHh----------------cCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEe
Confidence 467999999999999988764 1235899999988776654433211 11234444
Q ss_pred ccccccccc----C--CCCceeEEEeccceecc-cCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhc
Q 037735 112 VPGSFYSSL----F--PKSSLHFVHSSYTLHWL-SKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELV 184 (329)
Q Consensus 112 vpgsFy~~l----f--p~~s~dl~~Ss~alhWL-s~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~ 184 (329)
++..-. + +++++|+|+|+.++||+ .+.+ |...+|+..++.|+
T Consensus 98 ---D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~----------------------------~~~~~l~~~~~~Lk 146 (313)
T 3bgv_A 98 ---DSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYE----------------------------QADMMLRNACERLS 146 (313)
T ss_dssp ---CTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSHH----------------------------HHHHHHHHHHTTEE
T ss_pred ---cccccchhhhcccCCCCEEEEEEecchhhccCCHH----------------------------HHHHHHHHHHHHhC
Confidence 443322 4 35699999999999998 4433 55688999999999
Q ss_pred cCceEEEEeccc
Q 037735 185 PGGLAALVMFSV 196 (329)
Q Consensus 185 pGG~l~~~~~g~ 196 (329)
|||++++++++.
T Consensus 147 pgG~li~~~~~~ 158 (313)
T 3bgv_A 147 PGGYFIGTTPNS 158 (313)
T ss_dssp EEEEEEEEEECH
T ss_pred CCcEEEEecCCh
Confidence 999999999875
No 56
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.11 E-value=5.4e-10 Score=94.60 Aligned_cols=134 Identities=14% Similarity=0.143 Sum_probs=98.1
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeecccccccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSSL 120 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~l 120 (329)
.+..+|+|+|||+|.++..+.. . - .+++..|+........-+..+ +-.|..+ + ..
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~--------~--------~-~~v~~vD~s~~~~~~a~~~~~--~v~~~~~---d---~~ 70 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLE--------F--------A-TKLYCIDINVIALKEVKEKFD--SVITLSD---P---KE 70 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHT--------T--------E-EEEEEECSCHHHHHHHHHHCT--TSEEESS---G---GG
T ss_pred CCCCeEEEECCCCCHHHHHHHh--------h--------c-CeEEEEeCCHHHHHHHHHhCC--CcEEEeC---C---CC
Confidence 4467999999999999988864 1 1 279999998766665554432 2234443 3 34
Q ss_pred CCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCCCC
Q 037735 121 FPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPDGI 200 (329)
Q Consensus 121 fp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~~~ 200 (329)
+|++++|+++++.++||+.+ ...+|+...+.|+|||++++..+.+.+..
T Consensus 71 ~~~~~~D~v~~~~~l~~~~~-------------------------------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~ 119 (170)
T 3i9f_A 71 IPDNSVDFILFANSFHDMDD-------------------------------KQHVISEVKRILKDDGRVIIIDWRKENTG 119 (170)
T ss_dssp SCTTCEEEEEEESCSTTCSC-------------------------------HHHHHHHHHHHEEEEEEEEEEEECSSCCS
T ss_pred CCCCceEEEEEccchhcccC-------------------------------HHHHHHHHHHhcCCCCEEEEEEcCccccc
Confidence 78899999999999999743 34789999999999999999988765432
Q ss_pred cccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEee
Q 037735 201 PLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKMT 259 (329)
Q Consensus 201 ~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~~ 259 (329)
... . .....+.+++.+.++ +|++.+.....
T Consensus 120 ~~~------~--------------------~~~~~~~~~~~~~l~---Gf~~~~~~~~~ 149 (170)
T 3i9f_A 120 IGP------P--------------------LSIRMDEKDYMGWFS---NFVVEKRFNPT 149 (170)
T ss_dssp SSS------C--------------------GGGCCCHHHHHHHTT---TEEEEEEECSS
T ss_pred cCc------h--------------------HhhhcCHHHHHHHHh---CcEEEEccCCC
Confidence 110 0 033468999999998 59998877653
No 57
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.10 E-value=6.2e-10 Score=102.83 Aligned_cols=160 Identities=10% Similarity=0.006 Sum_probs=102.0
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCc-cceEEecCCCcchHHhhhhcCCC--Ccceeeeccccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAI-EFQVFFNDHSDNDFNTLFKSLPQ--SRSYYAAGVPGSFY 117 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~p-e~~v~~nDLp~ndfn~lf~~l~~--~~~~f~~gvpgsFy 117 (329)
.++.+|||+|||+|..+..+.+ . .| ..+++..|+........-+.... .+--|..+ ++.
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~--------~-------~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~---d~~ 82 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMP--------L-------LPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEG---DAT 82 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTT--------T-------SCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEES---CTT
T ss_pred CCCCeEEEecCCCCHHHHHHHH--------h-------CCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEc---chh
Confidence 4568999999999999888864 2 23 36899999987766554433221 12234443 564
Q ss_pred cccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccC
Q 037735 118 SSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVP 197 (329)
Q Consensus 118 ~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~ 197 (329)
+-.+ ++++|+|++..++|++. |+..+|+...+.|+|||++++..+...
T Consensus 83 ~~~~-~~~fD~v~~~~~l~~~~-------------------------------~~~~~l~~~~~~LkpgG~l~~~~~~~~ 130 (284)
T 3gu3_A 83 EIEL-NDKYDIAICHAFLLHMT-------------------------------TPETMLQKMIHSVKKGGKIICFEPHWI 130 (284)
T ss_dssp TCCC-SSCEEEEEEESCGGGCS-------------------------------SHHHHHHHHHHTEEEEEEEEEEECCHH
T ss_pred hcCc-CCCeeEEEECChhhcCC-------------------------------CHHHHHHHHHHHcCCCCEEEEEecchh
Confidence 4334 57999999999999964 344889999999999999999876510
Q ss_pred ----CCCcccCC-cccchHHHHHHHHHHHH-hcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEE
Q 037735 198 ----DGIPLVNN-AAGSFYNTFGSCLVELT-KMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEK 257 (329)
Q Consensus 198 ----~~~~~~~~-~~~~~~~~l~~a~~~l~-~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~ 257 (329)
.......+ ........+...+.+.. ..| ..+++.+++.+++++.| |+.++...
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~l~~aG-F~~v~~~~ 189 (284)
T 3gu3_A 131 SNMASYLLDGEKQSEFIQLGVLQKLFESDTQRNG------KDGNIGMKIPIYLSELG-VKNIECRV 189 (284)
T ss_dssp HHHHSEEETTSCHHHHCCHHHHHHHHHHHHHHTC------CCTTGGGTHHHHHHHTT-CEEEEEEE
T ss_pred cccccceecCcchhhccchHHHHHHHHHHhhhhc------ccccHHHHHHHHHHHcC-CCeEEEEE
Confidence 00000000 00001222333333221 234 55677889999999995 98877643
No 58
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.10 E-value=8.8e-10 Score=105.06 Aligned_cols=149 Identities=19% Similarity=0.184 Sum_probs=99.3
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC----Ccceeeecccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ----SRSYYAAGVPGSF 116 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~----~~~~f~~gvpgsF 116 (329)
.+..+|+|+|||+|..+..+.+ + .|..+++.-|+|... . -+.... .+--|. .++|
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~--------~-------~p~~~~~~~D~~~~~-~--~~~~~~~~~~~~v~~~---~~d~ 241 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLR--------E-------HPGLQGVLLDRAEVV-A--RHRLDAPDVAGRWKVV---EGDF 241 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHH--------H-------CTTEEEEEEECHHHH-T--TCCCCCGGGTTSEEEE---ECCT
T ss_pred cCCceEEEECCccCHHHHHHHH--------H-------CCCCEEEEecCHHHh-h--cccccccCCCCCeEEE---ecCC
Confidence 4568999999999999988875 3 355789999996422 2 111111 112233 3578
Q ss_pred ccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEeccc
Q 037735 117 YSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSV 196 (329)
Q Consensus 117 y~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~ 196 (329)
+ ..+| ++|+++++.++|.+++. +...+|+..++.|+|||++++.-...
T Consensus 242 ~-~~~p--~~D~v~~~~vlh~~~d~-----------------------------~~~~~L~~~~~~LkpgG~l~i~e~~~ 289 (348)
T 3lst_A 242 L-REVP--HADVHVLKRILHNWGDE-----------------------------DSVRILTNCRRVMPAHGRVLVIDAVV 289 (348)
T ss_dssp T-TCCC--CCSEEEEESCGGGSCHH-----------------------------HHHHHHHHHHHTCCTTCEEEEEECCB
T ss_pred C-CCCC--CCcEEEEehhccCCCHH-----------------------------HHHHHHHHHHHhcCCCCEEEEEEecc
Confidence 6 4566 89999999999975431 33588999999999999999987654
Q ss_pred CCCCcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEE
Q 037735 197 PDGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEK 257 (329)
Q Consensus 197 ~~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~ 257 (329)
++.... .+....+ +.-++..| -..++.+|+.+++++.| |+++++..
T Consensus 290 ~~~~~~-------~~~~~~d-~~~~~~~~------~~~~t~~e~~~ll~~aG-f~~~~~~~ 335 (348)
T 3lst_A 290 PEGNDA-------HQSKEMD-FMMLAART------GQERTAAELEPLFTAAG-LRLDRVVG 335 (348)
T ss_dssp CSSSSC-------CHHHHHH-HHHHHTTS------CCCCBHHHHHHHHHHTT-EEEEEEEE
T ss_pred CCCCCc-------chhhhcC-hhhhhcCC------CcCCCHHHHHHHHHHCC-CceEEEEE
Confidence 432111 1111111 12232233 34589999999999995 99988765
No 59
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.10 E-value=6.8e-10 Score=98.66 Aligned_cols=107 Identities=18% Similarity=0.259 Sum_probs=77.3
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeecccccccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSSL 120 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~l 120 (329)
.+..+|+|+|||+|..+..+.+.. .+++..|+...+....-+.++. .-+..+ ++.+..
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~-----------------~~v~~~D~s~~~~~~a~~~~~~--~~~~~~---d~~~~~ 96 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF-----------------GDTAGLELSEDMLTHARKRLPD--ATLHQG---DMRDFR 96 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH-----------------SEEEEEESCHHHHHHHHHHCTT--CEEEEC---CTTTCC
T ss_pred CCCCeEEEecccCCHHHHHHHHhC-----------------CcEEEEeCCHHHHHHHHHhCCC--CEEEEC---CHHHcc
Confidence 345799999999999998887521 2689999987776665555432 233443 453322
Q ss_pred CCCCceeEEEe-ccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCC
Q 037735 121 FPKSSLHFVHS-SYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPD 198 (329)
Q Consensus 121 fp~~s~dl~~S-s~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~ 198 (329)
+ ++++|+|+| ..++||+.+. .|+..+|+..++.|+|||++++..+..++
T Consensus 97 ~-~~~~D~v~~~~~~~~~~~~~----------------------------~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 146 (239)
T 3bxo_A 97 L-GRKFSAVVSMFSSVGYLKTT----------------------------EELGAAVASFAEHLEPGGVVVVEPWWFPE 146 (239)
T ss_dssp C-SSCEEEEEECTTGGGGCCSH----------------------------HHHHHHHHHHHHTEEEEEEEEECCCCCTT
T ss_pred c-CCCCcEEEEcCchHhhcCCH----------------------------HHHHHHHHHHHHhcCCCeEEEEEeccCcc
Confidence 3 789999995 4599997532 25678999999999999999998765543
No 60
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.09 E-value=4.6e-10 Score=99.86 Aligned_cols=106 Identities=13% Similarity=0.165 Sum_probs=77.7
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCC--cceeeeccccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQS--RSYYAAGVPGSFYSS 119 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~--~~~f~~gvpgsFy~~ 119 (329)
+..+|+|+|||+|..+..+.+ . ..+++..|+..++....-+.++.. +.-|.. +++.+-
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~--------~---------~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~---~d~~~~ 96 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCP--------K---------FKNTWAVDLSQEMLSEAENKFRSQGLKPRLAC---QDISNL 96 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGG--------G---------SSEEEEECSCHHHHHHHHHHHHHTTCCCEEEC---CCGGGC
T ss_pred CCCeEEEeCCCCCHHHHHHHH--------C---------CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEe---cccccC
Confidence 567999999999999988863 1 147999999877766654443211 122333 356443
Q ss_pred cCCCCceeEEEecc-ceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEeccc
Q 037735 120 LFPKSSLHFVHSSY-TLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSV 196 (329)
Q Consensus 120 lfp~~s~dl~~Ss~-alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~ 196 (329)
.++ +++|+|+++. ++||+.+. .|...+|+..++.|+|||++++.+..+
T Consensus 97 ~~~-~~fD~v~~~~~~l~~~~~~----------------------------~~~~~~l~~~~~~L~pgG~l~~~~~~~ 145 (246)
T 1y8c_A 97 NIN-RKFDLITCCLDSTNYIIDS----------------------------DDLKKYFKAVSNHLKEGGVFIFDINSY 145 (246)
T ss_dssp CCS-CCEEEEEECTTGGGGCCSH----------------------------HHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred Ccc-CCceEEEEcCccccccCCH----------------------------HHHHHHHHHHHHhcCCCcEEEEEecCH
Confidence 455 8999999998 99997432 256788999999999999999988754
No 61
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.07 E-value=1.5e-10 Score=112.69 Aligned_cols=147 Identities=14% Similarity=0.155 Sum_probs=99.0
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhc-CCCCcceeeecccccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKS-LPQSRSYYAAGVPGSFYSSL 120 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~-l~~~~~~f~~gvpgsFy~~l 120 (329)
+..+|||+|||+|..+..+.. + ..+++..|+..++....-+. ++.....|..+ +...-.
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~~--------~---------g~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~---~~~~l~ 166 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQE--------A---------GVRHLGFEPSSGVAAKAREKGIRVRTDFFEKA---TADDVR 166 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHHH--------T---------TCEEEEECCCHHHHHHHHTTTCCEECSCCSHH---HHHHHH
T ss_pred CCCEEEEecCCCCHHHHHHHH--------c---------CCcEEEECCCHHHHHHHHHcCCCcceeeechh---hHhhcc
Confidence 457999999999998888764 1 14899999988776655443 11111112211 221223
Q ss_pred CCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCCCC
Q 037735 121 FPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPDGI 200 (329)
Q Consensus 121 fp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~~~ 200 (329)
++++++|+|+|+.++||+. |...||+..++.|+|||+|++.+....+.
T Consensus 167 ~~~~~fD~I~~~~vl~h~~-------------------------------d~~~~l~~~~r~LkpgG~l~i~~~~~~~~- 214 (416)
T 4e2x_A 167 RTEGPANVIYAANTLCHIP-------------------------------YVQSVLEGVDALLAPDGVFVFEDPYLGDI- 214 (416)
T ss_dssp HHHCCEEEEEEESCGGGCT-------------------------------THHHHHHHHHHHEEEEEEEEEEEECHHHH-
T ss_pred cCCCCEEEEEECChHHhcC-------------------------------CHHHHHHHHHHHcCCCeEEEEEeCChHHh-
Confidence 6789999999999999975 34588999999999999999987543210
Q ss_pred cccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEee
Q 037735 201 PLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKMT 259 (329)
Q Consensus 201 ~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~~ 259 (329)
. ....-... -.+..++.+.+++..++++.| |++.+++.+.
T Consensus 215 ----------~-------~~~~~~~~-~~~~~~~~s~~~l~~ll~~aG-f~~~~~~~~~ 254 (416)
T 4e2x_A 215 ----------V-------AKTSFDQI-FDEHFFLFSATSVQGMAQRCG-FELVDVQRLP 254 (416)
T ss_dssp ----------H-------HHTCGGGC-STTCCEECCHHHHHHHHHHTT-EEEEEEEEEC
T ss_pred ----------h-------hhcchhhh-hhhhhhcCCHHHHHHHHHHcC-CEEEEEEEcc
Confidence 0 00000000 011155689999999999994 9999988763
No 62
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.07 E-value=1.4e-09 Score=102.61 Aligned_cols=150 Identities=16% Similarity=0.147 Sum_probs=100.0
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC----CCcceeeecccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP----QSRSYYAAGVPGSF 116 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~----~~~~~f~~gvpgsF 116 (329)
.+..+|+|+|||+|..+..+.+ + .|..+++.-|+ .......-+.+. ..+--|.. ++|
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~--------~-------~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~---~d~ 228 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLT--------A-------HEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVV---GSF 228 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHH--------H-------CTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEE---CCT
T ss_pred CCCCEEEEeCCChhHHHHHHHH--------H-------CCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEec---CCC
Confidence 3468999999999988887765 3 34567888899 455554433221 11223443 578
Q ss_pred ccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEeccc
Q 037735 117 YSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSV 196 (329)
Q Consensus 117 y~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~ 196 (329)
+ ..+|. ++|++++..++|..++ .+..++|+..++.|+|||+|++.-.-.
T Consensus 229 ~-~~~p~-~~D~v~~~~vlh~~~~-----------------------------~~~~~~l~~~~~~L~pgG~l~i~e~~~ 277 (332)
T 3i53_A 229 F-DPLPA-GAGGYVLSAVLHDWDD-----------------------------LSAVAILRRCAEAAGSGGVVLVIEAVA 277 (332)
T ss_dssp T-SCCCC-SCSEEEEESCGGGSCH-----------------------------HHHHHHHHHHHHHHTTTCEEEEEECCC
T ss_pred C-CCCCC-CCcEEEEehhhccCCH-----------------------------HHHHHHHHHHHHhcCCCCEEEEEeecC
Confidence 6 45666 8999999999997542 134588999999999999999987654
Q ss_pred CCCCcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEe
Q 037735 197 PDGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKM 258 (329)
Q Consensus 197 ~~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~ 258 (329)
++..+ ...++.. -|+..+ -..+|.+|+.+++++.| |++.++...
T Consensus 278 ~~~~~------~~~~d~~-----~~~~~~------~~~~t~~e~~~ll~~aG-f~~~~~~~~ 321 (332)
T 3i53_A 278 GDEHA------GTGMDLR-----MLTYFG------GKERSLAELGELAAQAG-LAVRAAHPI 321 (332)
T ss_dssp C---C------CHHHHHH-----HHHHHS------CCCCCHHHHHHHHHHTT-EEEEEEEEC
T ss_pred CCCCc------cHHHHHH-----HHhhCC------CCCCCHHHHHHHHHHCC-CEEEEEEEC
Confidence 43211 1122211 122223 34589999999999995 999877643
No 63
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.07 E-value=1.8e-10 Score=106.99 Aligned_cols=166 Identities=14% Similarity=0.120 Sum_probs=102.5
Q ss_pred ceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCC------cceeeecccccc
Q 037735 43 TFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQS------RSYYAAGVPGSF 116 (329)
Q Consensus 43 ~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~------~~~f~~gvpgsF 116 (329)
..+|||+|||+|.++..+.. + ..+|+..|+...+....-+.+... +--|+.+ ++
T Consensus 83 ~~~vLDlGcG~G~~~~~l~~--------~---------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~---d~ 142 (299)
T 3g2m_A 83 SGPVLELAAGMGRLTFPFLD--------L---------GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQG---DM 142 (299)
T ss_dssp CSCEEEETCTTTTTHHHHHT--------T---------TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEEC---BT
T ss_pred CCcEEEEeccCCHHHHHHHH--------c---------CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeC---ch
Confidence 34999999999999998874 1 257999999887776655544321 2234544 56
Q ss_pred ccccCCCCceeEEE-eccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecc
Q 037735 117 YSSLFPKSSLHFVH-SSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFS 195 (329)
Q Consensus 117 y~~lfp~~s~dl~~-Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g 195 (329)
.+ +-+++++|+|+ ++.++||++. .|...+|+..++.|+|||+|++.++.
T Consensus 143 ~~-~~~~~~fD~v~~~~~~~~~~~~-----------------------------~~~~~~l~~~~~~L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 143 SA-FALDKRFGTVVISSGSINELDE-----------------------------ADRRGLYASVREHLEPGGKFLLSLAM 192 (299)
T ss_dssp TB-CCCSCCEEEEEECHHHHTTSCH-----------------------------HHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hc-CCcCCCcCEEEECCcccccCCH-----------------------------HHHHHHHHHHHHHcCCCcEEEEEeec
Confidence 44 33378999888 5688998642 25668899999999999999999987
Q ss_pred cCCCCcccCCcccchHHH-HHHHH--HH----------H--H----hcCCcCCCc--ccCCCHHHHHHHHHhCCceEEeE
Q 037735 196 VPDGIPLVNNAAGSFYNT-FGSCL--VE----------L--T----KMGILSKEK--MYNPTPKELEGIIQRNGNFTIER 254 (329)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~-l~~a~--~~----------l--~----~eG~i~~~~--~y~ps~eE~~~~i~~~g~f~i~~ 254 (329)
++.......... ..+.. -...+ .. + . ..|...... .++.+++|+.++++..| |+++.
T Consensus 193 ~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aG-F~v~~ 270 (299)
T 3g2m_A 193 SEAAESEPLERK-QELPGRSGRRYVLHVRHLPAEEIQEITIHPADETTDPFVVCTHRRRLLAPDQVVRELVRSG-FDVIA 270 (299)
T ss_dssp CHHHHSCCCCC--------------CCEEEEEEEEEEEEEEEESCC--CCCCEEEEEEEEECHHHHHHHHHHTT-CEEEE
T ss_pred Cccccccchhcc-ceeecCCCcEEEEEEEEeccccEEEEEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHHCC-CEEEE
Confidence 653210000000 00000 00000 00 0 0 000000001 34569999999999995 99999
Q ss_pred EEEeec
Q 037735 255 MEKMTN 260 (329)
Q Consensus 255 ~e~~~~ 260 (329)
.+.+..
T Consensus 271 ~~~~~~ 276 (299)
T 3g2m_A 271 QTPFAS 276 (299)
T ss_dssp EEEECT
T ss_pred EEecCC
Confidence 987753
No 64
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.06 E-value=1.3e-09 Score=100.02 Aligned_cols=110 Identities=15% Similarity=0.219 Sum_probs=79.3
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCC----cceeeecccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQS----RSYYAAGVPGSF 116 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~----~~~f~~gvpgsF 116 (329)
.+..+|||+|||+|..+..+.. . +..+++..|+...+....-+.+... +-.|..+ ++
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~--------~--------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~---d~ 123 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYER--------A--------GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQ---DS 123 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHH--------H--------TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEES---CT
T ss_pred CCCCeEEEECCCCCHHHHHHHH--------C--------CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEEC---Cc
Confidence 3457999999999999888653 1 1237999999887766654443221 1234443 55
Q ss_pred ccccC-CCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecc
Q 037735 117 YSSLF-PKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFS 195 (329)
Q Consensus 117 y~~lf-p~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g 195 (329)
.+..+ +++++|+|+++.++||+-.. ..|...+|+..++.|+|||++++.++.
T Consensus 124 ~~~~~~~~~~fD~v~~~~~l~~~~~~---------------------------~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 124 YGRHMDLGKEFDVISSQFSFHYAFST---------------------------SESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp TTSCCCCSSCEEEEEEESCGGGGGSS---------------------------HHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred cccccCCCCCcCEEEECchhhhhcCC---------------------------HHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 44455 68999999999999995211 125678999999999999999999866
Q ss_pred c
Q 037735 196 V 196 (329)
Q Consensus 196 ~ 196 (329)
.
T Consensus 177 ~ 177 (298)
T 1ri5_A 177 R 177 (298)
T ss_dssp H
T ss_pred H
Confidence 4
No 65
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.06 E-value=8.2e-10 Score=103.07 Aligned_cols=162 Identities=15% Similarity=0.121 Sum_probs=107.9
Q ss_pred CceEEEeeeCCC--CcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCC---cceeeecccccc
Q 037735 42 NTFRIADFGCST--GPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQS---RSYYAAGVPGSF 116 (329)
Q Consensus 42 ~~~~IaDlGCst--G~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~---~~~f~~gvpgsF 116 (329)
...+|+|+|||+ +.|+..+.+.+ .|+.+|+..|....+....-..+... +--|+.+.-.+.
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~--------------~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~ 143 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSV--------------APESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDP 143 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHH--------------CTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCH
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHH--------------CCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccCh
Confidence 457899999998 77888777633 46789999999888877665555431 234666542222
Q ss_pred ccccC--C--CCcee-----EEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCc
Q 037735 117 YSSLF--P--KSSLH-----FVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGG 187 (329)
Q Consensus 117 y~~lf--p--~~s~d-----l~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG 187 (329)
..++ | .+++| .++|+.+||||.+.. |....|+.-++.|+|||
T Consensus 144 -~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~----------------------------~p~~~l~~l~~~L~PGG 194 (277)
T 3giw_A 144 -ASILDAPELRDTLDLTRPVALTVIAIVHFVLDED----------------------------DAVGIVRRLLEPLPSGS 194 (277)
T ss_dssp -HHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGG----------------------------CHHHHHHHHHTTSCTTC
T ss_pred -hhhhcccccccccCcCCcchHHhhhhHhcCCchh----------------------------hHHHHHHHHHHhCCCCc
Confidence 1111 1 35555 588999999986532 23467999999999999
Q ss_pred eEEEEecccCCCCcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEeecC-ccc
Q 037735 188 LAALVMFSVPDGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKMTNP-KQQ 264 (329)
Q Consensus 188 ~l~~~~~g~~~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~~~~-~~~ 264 (329)
+|+++.++.+...+ ..+.+.+.++ ..|. .+.++|.+|+.+.++ +|++..-.....+ |..
T Consensus 195 ~Lvls~~~~d~~p~--------~~~~~~~~~~---~~g~----p~~~rs~~ei~~~f~---GlelvePG~v~~~~Wrp 254 (277)
T 3giw_A 195 YLAMSIGTAEFAPQ--------EVGRVAREYA---ARNM----PMRLRTHAEAEEFFE---GLELVEPGIVQVHKWHP 254 (277)
T ss_dssp EEEEEEECCTTSHH--------HHHHHHHHHH---HTTC----CCCCCCHHHHHHTTT---TSEECTTCSEEGGGSSC
T ss_pred EEEEEeccCCCCHH--------HHHHHHHHHH---hcCC----CCccCCHHHHHHHhC---CCcccCCcEeecccccC
Confidence 99999998763211 1233444443 3342 167799999999984 6998765544333 654
No 66
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.06 E-value=1.8e-09 Score=103.93 Aligned_cols=151 Identities=14% Similarity=0.151 Sum_probs=101.7
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC----CCcceeeecccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP----QSRSYYAAGVPGSF 116 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~----~~~~~f~~gvpgsF 116 (329)
.+..+|+|+|||+|..+..+.+ + .|..+++.-|+ .......-+.+. ..+--|.. ++|
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~--------~-------~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~---~d~ 261 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLD--------A-------FPGLRGTLLER-PPVAEEARELLTGRGLADRCEILP---GDF 261 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHH--------H-------CTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEE---CCT
T ss_pred ccCcEEEEeCCCccHHHHHHHH--------H-------CCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEec---cCC
Confidence 4568999999999998888775 3 35578999999 455444433221 11223443 578
Q ss_pred ccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEeccc
Q 037735 117 YSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSV 196 (329)
Q Consensus 117 y~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~ 196 (329)
+ ..+|. ++|++++...+|+.++. +..++|+..++.|+|||+|++.-...
T Consensus 262 ~-~~~p~-~~D~v~~~~vlh~~~d~-----------------------------~~~~~L~~~~~~L~pgG~l~i~e~~~ 310 (369)
T 3gwz_A 262 F-ETIPD-GADVYLIKHVLHDWDDD-----------------------------DVVRILRRIATAMKPDSRLLVIDNLI 310 (369)
T ss_dssp T-TCCCS-SCSEEEEESCGGGSCHH-----------------------------HHHHHHHHHHTTCCTTCEEEEEEEBC
T ss_pred C-CCCCC-CceEEEhhhhhccCCHH-----------------------------HHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 6 45666 89999999999986432 23478999999999999999987765
Q ss_pred CCCCcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEE
Q 037735 197 PDGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEK 257 (329)
Q Consensus 197 ~~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~ 257 (329)
++.... .....+ +.-|+..| -..++.+|+++++++. +|++.++..
T Consensus 311 ~~~~~~--------~~~~~d-~~~~~~~~------g~~~t~~e~~~ll~~a-Gf~~~~~~~ 355 (369)
T 3gwz_A 311 DERPAA--------STLFVD-LLLLVLVG------GAERSESEFAALLEKS-GLRVERSLP 355 (369)
T ss_dssp CSSCCH--------HHHHHH-HHHHHHHS------CCCBCHHHHHHHHHTT-TEEEEEEEE
T ss_pred CCCCCC--------chhHhh-HHHHhhcC------CccCCHHHHHHHHHHC-CCeEEEEEE
Confidence 543211 011111 11122223 3458999999999998 499988765
No 67
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.06 E-value=3.8e-10 Score=99.63 Aligned_cols=150 Identities=16% Similarity=0.091 Sum_probs=96.0
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCC--------cceeeeccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQS--------RSYYAAGVP 113 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~--------~~~f~~gvp 113 (329)
+..+|+|+|||+|..+..+.+ . .|..+++..|+........-+.+... +--|..+
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~--------~-------~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~-- 91 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSLLLK--------D-------KSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQS-- 91 (219)
T ss_dssp TCCEEEEETCTTCHHHHHHHT--------S-------TTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEEC--
T ss_pred CCCEEEEecCCCCHHHHHHHh--------c-------CCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeC--
Confidence 457999999999999888864 1 23368999999877766655443311 1234443
Q ss_pred cccccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEe
Q 037735 114 GSFYSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVM 193 (329)
Q Consensus 114 gsFy~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~ 193 (329)
++....++++++|+|+++.++||+++ .++..+|+..++.|+|||+++.+.
T Consensus 92 -d~~~~~~~~~~fD~V~~~~~l~~~~~-----------------------------~~~~~~l~~~~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 92 -SLVYRDKRFSGYDAATVIEVIEHLDE-----------------------------NRLQAFEKVLFEFTRPQTVIVSTP 141 (219)
T ss_dssp -CSSSCCGGGTTCSEEEEESCGGGCCH-----------------------------HHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred -cccccccccCCCCEEEEHHHHHhCCH-----------------------------HHHHHHHHHHHHhhCCCEEEEEcc
Confidence 45444467789999999999999742 145688999999999999655544
Q ss_pred cccCCCCcccCCcccchHHHHHHHHHHHHhcCCcCCCc-ccCCCHHHHH----HHHHhCCceEEeEEEE
Q 037735 194 FSVPDGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEK-MYNPTPKELE----GIIQRNGNFTIERMEK 257 (329)
Q Consensus 194 ~g~~~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~-~y~ps~eE~~----~~i~~~g~f~i~~~e~ 257 (329)
....+.. ... + ..+...... .+..+.+|+. .+++.. +|++.....
T Consensus 142 ~~~~~~~-~~~----------------~-~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~-Gf~v~~~~~ 191 (219)
T 3jwg_A 142 NKEYNFH-YGN----------------L-FEGNLRHRDHRFEWTRKEFQTWAVKVAEKY-GYSVRFLQI 191 (219)
T ss_dssp BGGGGGC-CCC----------------T------GGGCCTTSBCHHHHHHHHHHHHHHH-TEEEEEEEE
T ss_pred chhhhhh-hcc----------------c-CcccccccCceeeecHHHHHHHHHHHHHHC-CcEEEEEec
Confidence 3222111 000 0 000001111 4456899999 666667 498876654
No 68
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.05 E-value=2.1e-10 Score=100.89 Aligned_cols=108 Identities=13% Similarity=0.134 Sum_probs=81.2
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCC-cceeeeccccccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQS-RSYYAAGVPGSFYSS 119 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~-~~~f~~gvpgsFy~~ 119 (329)
.+..+|+|+|||+|.++..+.. . ..+++..|+........-+.+... +-.|..+ ++. .
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~--------~---------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~---d~~-~ 108 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAP--------H---------CKRLTVIDVMPRAIGRACQRTKRWSHISWAAT---DIL-Q 108 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGG--------G---------EEEEEEEESCHHHHHHHHHHTTTCSSEEEEEC---CTT-T
T ss_pred CCCCcEEEEcCCCCHHHHHHHH--------c---------CCEEEEEECCHHHHHHHHHhcccCCCeEEEEc---chh-h
Confidence 4568999999999999888753 1 147999999887777665555432 2234444 453 3
Q ss_pred cCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccC
Q 037735 120 LFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVP 197 (329)
Q Consensus 120 lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~ 197 (329)
+.|++++|+|+++.++||+.+.+ ++..+|+..++.|+|||.|+++++...
T Consensus 109 ~~~~~~fD~v~~~~~l~~~~~~~----------------------------~~~~~l~~~~~~L~pgG~l~~~~~~~~ 158 (216)
T 3ofk_A 109 FSTAELFDLIVVAEVLYYLEDMT----------------------------QMRTAIDNMVKMLAPGGHLVFGSARDA 158 (216)
T ss_dssp CCCSCCEEEEEEESCGGGSSSHH----------------------------HHHHHHHHHHHTEEEEEEEEEEEECHH
T ss_pred CCCCCCccEEEEccHHHhCCCHH----------------------------HHHHHHHHHHHHcCCCCEEEEEecCCC
Confidence 34889999999999999976532 456789999999999999999887543
No 69
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.04 E-value=2.3e-09 Score=100.73 Aligned_cols=155 Identities=16% Similarity=0.128 Sum_probs=102.5
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC----CCcceeeecccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP----QSRSYYAAGVPGSF 116 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~----~~~~~f~~gvpgsF 116 (329)
.+..+|+|+|||+|..+..+.+ + .|..+++..|++ ......-+.+. ..+--|.. +++
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~--------~-------~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~---~d~ 224 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQ--------H-------NPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIA---GSA 224 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHH--------H-------CTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEE---SCT
T ss_pred CCCCEEEEECCCcCHHHHHHHH--------H-------CCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEe---ccc
Confidence 4567999999999998887764 2 244689999998 66555443321 11123444 467
Q ss_pred ccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEeccc
Q 037735 117 YSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSV 196 (329)
Q Consensus 117 y~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~ 196 (329)
.+..+|.+ +|+++++..+|.+++ .+...+|+..++.|+|||++++.-+..
T Consensus 225 ~~~~~~~~-~D~v~~~~~l~~~~~-----------------------------~~~~~~l~~~~~~L~pgG~l~i~e~~~ 274 (335)
T 2r3s_A 225 FEVDYGND-YDLVLLPNFLHHFDV-----------------------------ATCEQLLRKIKTALAVEGKVIVFDFIP 274 (335)
T ss_dssp TTSCCCSC-EEEEEEESCGGGSCH-----------------------------HHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred ccCCCCCC-CcEEEEcchhccCCH-----------------------------HHHHHHHHHHHHhCCCCcEEEEEeecC
Confidence 65445554 999999999997532 245688999999999999999988766
Q ss_pred CCCCcccCCcccchHHHHHHHHHHHHhc-CCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEe
Q 037735 197 PDGIPLVNNAAGSFYNTFGSCLVELTKM-GILSKEKMYNPTPKELEGIIQRNGNFTIERMEKM 258 (329)
Q Consensus 197 ~~~~~~~~~~~~~~~~~l~~a~~~l~~e-G~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~ 258 (329)
++.... ..+..+.+.+ -+... + ...++.+|+.+++++.| |++.++...
T Consensus 275 ~~~~~~------~~~~~~~~~~-~~~~~~~------~~~~t~~~~~~ll~~aG-f~~~~~~~~ 323 (335)
T 2r3s_A 275 NSDRIT------PPDAAAFSLV-MLATTPN------GDAYTFAEYESMFSNAG-FSHSQLHSL 323 (335)
T ss_dssp CTTSSC------SHHHHHHHHH-HHHHSSS------CCCCCHHHHHHHHHHTT-CSEEEEECC
T ss_pred CCCcCC------chHHHHHHHH-HHeeCCC------CCcCCHHHHHHHHHHCC-CCeeeEEEC
Confidence 542211 1122222221 12221 2 34579999999999995 998876543
No 70
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.03 E-value=2.6e-09 Score=101.39 Aligned_cols=151 Identities=11% Similarity=0.134 Sum_probs=99.5
Q ss_pred ceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC---CC-Ccceeeecccccccc
Q 037735 43 TFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL---PQ-SRSYYAAGVPGSFYS 118 (329)
Q Consensus 43 ~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l---~~-~~~~f~~gvpgsFy~ 118 (329)
..+|+|+|||+|..+..+.+ + .|..+++.-|+| ......-+.+ +. .+--|. .++|++
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~--------~-------~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~---~~d~~~ 240 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLR--------R-------HPQLTGQIWDLP-TTRDAARKTIHAHDLGGRVEFF---EKNLLD 240 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHH--------H-------CTTCEEEEEECG-GGHHHHHHHHHHTTCGGGEEEE---ECCTTC
T ss_pred CCEEEEeCCCcCHHHHHHHH--------h-------CCCCeEEEEECH-HHHHHHHHHHHhcCCCCceEEE---eCCccc
Confidence 68999999999999988875 3 345789999995 3444332222 11 112233 357765
Q ss_pred cc-CCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccC
Q 037735 119 SL-FPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVP 197 (329)
Q Consensus 119 ~l-fp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~ 197 (329)
.. ++++++|+++++..+|++++ .+...+|+..++.|+|||++++.-...+
T Consensus 241 ~~~~~~~~~D~v~~~~vlh~~~~-----------------------------~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (352)
T 3mcz_A 241 ARNFEGGAADVVMLNDCLHYFDA-----------------------------REAREVIGHAAGLVKPGGALLILTMTMN 291 (352)
T ss_dssp GGGGTTCCEEEEEEESCGGGSCH-----------------------------HHHHHHHHHHHHTEEEEEEEEEEEECCC
T ss_pred CcccCCCCccEEEEecccccCCH-----------------------------HHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 44 35677999999999998642 1345889999999999999999877655
Q ss_pred CCCcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeE
Q 037735 198 DGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIER 254 (329)
Q Consensus 198 ~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~ 254 (329)
+... ...+..+.+...-....+ -..++.+|+++++++.| |++++
T Consensus 292 ~~~~------~~~~~~~~~~~~~~~~~~------~~~~t~~e~~~ll~~aG-f~~~~ 335 (352)
T 3mcz_A 292 DDRV------TPALSADFSLHMMVNTNH------GELHPTPWIAGVVRDAG-LAVGE 335 (352)
T ss_dssp TTSS------SSHHHHHHHHHHHHHSTT------CCCCCHHHHHHHHHHTT-CEEEE
T ss_pred CCCC------CCchHHHhhHHHHhhCCC------CCcCCHHHHHHHHHHCC-Cceee
Confidence 4321 112222222222111212 23579999999999995 99887
No 71
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.03 E-value=1.8e-09 Score=95.28 Aligned_cols=149 Identities=15% Similarity=0.104 Sum_probs=94.8
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCC--------cceeeeccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQS--------RSYYAAGVP 113 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~--------~~~f~~gvp 113 (329)
+..+|+|+|||+|.++..+.+ + .|..+++..|+........-+.+... +--|..+
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~--------~-------~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~-- 91 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILLK--------D-------SFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQG-- 91 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHHH--------C-------TTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEEC--
T ss_pred CCCEEEEeCCCCCHHHHHHHh--------h-------CCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeC--
Confidence 457999999999999988864 2 23358999999887776665544311 1234443
Q ss_pred cccccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEe
Q 037735 114 GSFYSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVM 193 (329)
Q Consensus 114 gsFy~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~ 193 (329)
++....++.+++|+|+++.++||+.+ .++..+|+..++.|+|||+++++.
T Consensus 92 -d~~~~~~~~~~fD~v~~~~~l~~~~~-----------------------------~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 92 -ALTYQDKRFHGYDAATVIEVIEHLDL-----------------------------SRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp -CTTSCCGGGCSCSEEEEESCGGGCCH-----------------------------HHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred -CcccccccCCCcCEEeeHHHHHcCCH-----------------------------HHHHHHHHHHHHHcCCCEEEEEcc
Confidence 45333456689999999999999742 255688999999999999666654
Q ss_pred cccCCCCcccCCcccchHHHHHHHHHHHHhcCCcCCCc-ccCCCHHHHH----HHHHhCCceEEeEEE
Q 037735 194 FSVPDGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEK-MYNPTPKELE----GIIQRNGNFTIERME 256 (329)
Q Consensus 194 ~g~~~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~-~y~ps~eE~~----~~i~~~g~f~i~~~e 256 (329)
...-+ ..|..+.. +...... .+..+.+|+. .+++.. +|+++...
T Consensus 142 ~~~~~-----------------~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~-Gf~v~~~~ 190 (217)
T 3jwh_A 142 NIEYN-----------------VKFANLPA-GKLRHKDHRFEWTRSQFQNWANKITERF-AYNVQFQP 190 (217)
T ss_dssp BHHHH-----------------HHTC------------CCSCBCHHHHHHHHHHHHHHS-SEEEEECC
T ss_pred Ccccc-----------------hhhccccc-ccccccccccccCHHHHHHHHHHHHHHc-CceEEEEe
Confidence 32111 00111110 1111111 4556899999 666777 59886543
No 72
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.02 E-value=7e-10 Score=96.50 Aligned_cols=139 Identities=15% Similarity=0.113 Sum_probs=96.3
Q ss_pred EEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC--CcceeeeccccccccccCC
Q 037735 45 RIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ--SRSYYAAGVPGSFYSSLFP 122 (329)
Q Consensus 45 ~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~--~~~~f~~gvpgsFy~~lfp 122 (329)
+|+|+|||+|.++..+.+ . ..+++..|+........-+.+.. .+..|.. +++.+-.+|
T Consensus 32 ~vLdiGcG~G~~~~~l~~--------~---------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~---~d~~~~~~~ 91 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLAS--------L---------GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQ---SNLADFDIV 91 (202)
T ss_dssp EEEECCCSCTHHHHHHHT--------T---------TCEEEEECSSHHHHHHHHHHHHHHTCCEEEEC---CBTTTBSCC
T ss_pred CEEEECCCCCHhHHHHHh--------C---------CCeEEEEECCHHHHHHHHHHHHhcCCceEEEE---cChhhcCCC
Confidence 999999999999887753 1 14899999987666554443321 1122333 356444578
Q ss_pred CCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCCCCcc
Q 037735 123 KSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPDGIPL 202 (329)
Q Consensus 123 ~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~~~~~ 202 (329)
++++|+|+++. .|| + ..|...+|+...+.|+|||.+++..+.+.+...
T Consensus 92 ~~~fD~v~~~~-~~~----~--------------------------~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~- 139 (202)
T 2kw5_A 92 ADAWEGIVSIF-CHL----P--------------------------SSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQY- 139 (202)
T ss_dssp TTTCSEEEEEC-CCC----C--------------------------HHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGG-
T ss_pred cCCccEEEEEh-hcC----C--------------------------HHHHHHHHHHHHHhcCCCcEEEEEEeccccccC-
Confidence 89999999964 444 2 125568899999999999999999988665210
Q ss_pred cCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEee
Q 037735 203 VNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKMT 259 (329)
Q Consensus 203 ~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~~ 259 (329)
..|. .....++.+.+|+.+.++ +|+++.++...
T Consensus 140 --------------------~~~~-~~~~~~~~~~~~l~~~l~---Gf~v~~~~~~~ 172 (202)
T 2kw5_A 140 --------------------NTGG-PKDLDLLPKLETLQSELP---SLNWLIANNLE 172 (202)
T ss_dssp --------------------TSCC-SSSGGGCCCHHHHHHHCS---SSCEEEEEEEE
T ss_pred --------------------CCCC-CCcceeecCHHHHHHHhc---CceEEEEEEEE
Confidence 0010 001167789999999998 59999988764
No 73
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.02 E-value=6.8e-09 Score=99.94 Aligned_cols=154 Identities=16% Similarity=0.142 Sum_probs=99.5
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeecccccccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSSL 120 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~l 120 (329)
.+..+|+|+|||+|..+..+.+ + .|..+++..|+| ..... .+.. .+--|. .|+|++ .
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~--------~-------~p~~~~~~~D~~-~~~~~-a~~~--~~v~~~---~~d~~~-~ 258 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVA--------K-------YPSINAINFDLP-HVIQD-APAF--SGVEHL---GGDMFD-G 258 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHH--------H-------CTTCEEEEEECH-HHHTT-CCCC--TTEEEE---ECCTTT-C
T ss_pred cCCCEEEEeCCCcCHHHHHHHH--------h-------CCCCEEEEEehH-HHHHh-hhhc--CCCEEE---ecCCCC-C
Confidence 3457999999999999998875 3 355789999994 33222 1211 122344 457876 6
Q ss_pred CCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCCCC
Q 037735 121 FPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPDGI 200 (329)
Q Consensus 121 fp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~~~ 200 (329)
+|++ |+++++.++|++++ .+..++|+..++.|+|||+|++.-+-.++..
T Consensus 259 ~p~~--D~v~~~~vlh~~~~-----------------------------~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~ 307 (368)
T 3reo_A 259 VPKG--DAIFIKWICHDWSD-----------------------------EHCLKLLKNCYAALPDHGKVIVAEYILPPSP 307 (368)
T ss_dssp CCCC--SEEEEESCGGGBCH-----------------------------HHHHHHHHHHHHHSCTTCEEEEEECCCCSSC
T ss_pred CCCC--CEEEEechhhcCCH-----------------------------HHHHHHHHHHHHHcCCCCEEEEEEeccCCCC
Confidence 7765 99999999996542 2445889999999999999999876544321
Q ss_pred cccCCcccchHHHHHHHHHHHHh-cCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEee
Q 037735 201 PLVNNAAGSFYNTFGSCLVELTK-MGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKMT 259 (329)
Q Consensus 201 ~~~~~~~~~~~~~l~~a~~~l~~-eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~~ 259 (329)
.. . . ........-+.-|+. .| -..++.+|+++++++.| |++.++....
T Consensus 308 ~~--~-~-~~~~~~~~d~~~~~~~~~------g~~rt~~e~~~ll~~AG-F~~v~~~~~~ 356 (368)
T 3reo_A 308 DP--S-I-ATKVVIHTDALMLAYNPG------GKERTEKEFQALAMASG-FRGFKVASCA 356 (368)
T ss_dssp CC--C-H-HHHHHHHHHHHHHHHSSB------CCCCCHHHHHHHHHHTT-CCEEEEEEEE
T ss_pred CC--c-h-hhhHHHhhhHHHHhhcCC------CccCCHHHHHHHHHHCC-CeeeEEEEeC
Confidence 11 0 0 000011111122221 12 24579999999999995 9988876553
No 74
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.00 E-value=2.4e-09 Score=96.55 Aligned_cols=148 Identities=16% Similarity=0.164 Sum_probs=100.9
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCc---------------
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSR--------------- 105 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~--------------- 105 (329)
.+..+|||+|||+|..+..+.. . .+ .+|+..|+..++...+-+.+....
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~--------~-------~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~ 118 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSAC--------E-------SF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDL 118 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGG--------G-------TE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhh--------c-------cc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcc
Confidence 3568999999999999988753 1 12 379999998877666544443221
Q ss_pred -----------------c-eeeecccccccccc-CCC---CceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHH
Q 037735 106 -----------------S-YYAAGVPGSFYSSL-FPK---SSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEA 163 (329)
Q Consensus 106 -----------------~-~f~~gvpgsFy~~l-fp~---~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~a 163 (329)
- -|.. +++.+.. +++ +++|+|+|+.++|++..-
T Consensus 119 ~~~~~~~~~~~~~l~~~v~~~~~---~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~---------------------- 173 (265)
T 2i62_A 119 EGNRMKGPEKEEKLRRAIKQVLK---CDVTQSQPLGGVSLPPADCLLSTLCLDAACPD---------------------- 173 (265)
T ss_dssp TTTCSCHHHHHHHHHHHEEEEEE---CCTTSSSTTTTCCCCCEEEEEEESCHHHHCSS----------------------
T ss_pred cccccchHHHHHHhhhhheeEEE---eeeccCCCCCccccCCccEEEEhhhhhhhcCC----------------------
Confidence 1 2333 3454432 356 899999999999976421
Q ss_pred HHHHHhhcHHHHHHHHHHHhccCceEEEEecccCCCCcccCCcccchHHHHHHHHHHHHhcCCcCCCc-ccCCCHHHHHH
Q 037735 164 YAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPDGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEK-MYNPTPKELEG 242 (329)
Q Consensus 164 y~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~-~y~ps~eE~~~ 242 (329)
..|...+|+..++.|+|||+|++......+... .| .... .+..+.+++.+
T Consensus 174 -----~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~----------------------~~--~~~~~~~~~~~~~~~~ 224 (265)
T 2i62_A 174 -----LPAYRTALRNLGSLLKPGGFLVMVDALKSSYYM----------------------IG--EQKFSSLPLGWETVRD 224 (265)
T ss_dssp -----HHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEE----------------------ET--TEEEECCCCCHHHHHH
T ss_pred -----hHHHHHHHHHHHhhCCCCcEEEEEecCCCceEE----------------------cC--CccccccccCHHHHHH
Confidence 125668899999999999999999854332100 01 0000 34568999999
Q ss_pred HHHhCCceEEeEEEEee
Q 037735 243 IIQRNGNFTIERMEKMT 259 (329)
Q Consensus 243 ~i~~~g~f~i~~~e~~~ 259 (329)
++++.| |+++.++...
T Consensus 225 ~l~~aG-f~~~~~~~~~ 240 (265)
T 2i62_A 225 AVEEAG-YTIEQFEVIS 240 (265)
T ss_dssp HHHHTT-CEEEEEEEEC
T ss_pred HHHHCC-CEEEEEEEec
Confidence 999984 9999988764
No 75
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.00 E-value=8.8e-09 Score=99.08 Aligned_cols=152 Identities=15% Similarity=0.146 Sum_probs=99.4
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeeccccccccccC
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSSLF 121 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~lf 121 (329)
+..+|+|+|||+|..+..+.+ + .|..+++..|+|. .... .+.. .+--|. .|+|++ .+
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~--------~-------~p~~~~~~~D~~~-~~~~-a~~~--~~v~~~---~~D~~~-~~ 257 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAA--------H-------YPTIKGVNFDLPH-VISE-APQF--PGVTHV---GGDMFK-EV 257 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHH--------H-------CTTCEEEEEECHH-HHTT-CCCC--TTEEEE---ECCTTT-CC
T ss_pred CCCEEEEeCCCCCHHHHHHHH--------H-------CCCCeEEEecCHH-HHHh-hhhc--CCeEEE---eCCcCC-CC
Confidence 467999999999999988875 3 3557899999952 3221 1111 122344 458877 67
Q ss_pred CCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCCCCc
Q 037735 122 PKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPDGIP 201 (329)
Q Consensus 122 p~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~~~~ 201 (329)
|++ |+++++.+||..++ .|...+|+..++.|+|||+|++.-...++...
T Consensus 258 p~~--D~v~~~~vlh~~~d-----------------------------~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~ 306 (364)
T 3p9c_A 258 PSG--DTILMKWILHDWSD-----------------------------QHCATLLKNCYDALPAHGKVVLVQCILPVNPE 306 (364)
T ss_dssp CCC--SEEEEESCGGGSCH-----------------------------HHHHHHHHHHHHHSCTTCEEEEEECCBCSSCC
T ss_pred CCC--CEEEehHHhccCCH-----------------------------HHHHHHHHHHHHHcCCCCEEEEEEeccCCCCC
Confidence 865 99999999985432 24558899999999999999998765443211
Q ss_pred ccCCcccchHH-HHHHHHHHHH-hcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEee
Q 037735 202 LVNNAAGSFYN-TFGSCLVELT-KMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKMT 259 (329)
Q Consensus 202 ~~~~~~~~~~~-~l~~a~~~l~-~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~~ 259 (329)
. ..... ....-+.-|+ ..| -..+|.+|+++++++.| |++.++....
T Consensus 307 ~-----~~~~~~~~~~d~~m~~~~~~------g~~rt~~e~~~ll~~AG-F~~v~~~~~~ 354 (364)
T 3p9c_A 307 A-----NPSSQGVFHVDMIMLAHNPG------GRERYEREFQALARGAG-FTGVKSTYIY 354 (364)
T ss_dssp S-----SHHHHHHHHHHHHHHHHCSS------CCCCBHHHHHHHHHHTT-CCEEEEEEEE
T ss_pred c-----chhhhhHHHhHHHHHhcccC------CccCCHHHHHHHHHHCC-CceEEEEEcC
Confidence 1 00110 0111122221 122 23479999999999995 9998877553
No 76
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.98 E-value=8.9e-10 Score=95.00 Aligned_cols=139 Identities=14% Similarity=0.201 Sum_probs=94.2
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC---CCcceeeecccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP---QSRSYYAAGVPGSFYS 118 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~---~~~~~f~~gvpgsFy~ 118 (329)
+..+|+|+|||+|.++..+.+ . ..+++..|+........-+... ....-+..+ ++.+
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~--------~---------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~---d~~~ 91 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAA--------N---------GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVV---DLNN 91 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHH--------T---------TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEEC---CGGG
T ss_pred CCCeEEEEcCCCCHHHHHHHH--------C---------CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEc---chhh
Confidence 346999999999999888764 1 1479999998766555433321 111223333 5544
Q ss_pred ccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCC
Q 037735 119 SLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPD 198 (329)
Q Consensus 119 ~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~ 198 (329)
..+ ++++|+|+++.++||++. .|...+|+..++.|+|||++++......+
T Consensus 92 ~~~-~~~~D~v~~~~~l~~~~~-----------------------------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 141 (199)
T 2xvm_A 92 LTF-DRQYDFILSTVVLMFLEA-----------------------------KTIPGLIANMQRCTKPGGYNLIVAAMDTA 141 (199)
T ss_dssp CCC-CCCEEEEEEESCGGGSCG-----------------------------GGHHHHHHHHHHTEEEEEEEEEEEEBCCS
T ss_pred CCC-CCCceEEEEcchhhhCCH-----------------------------HHHHHHHHHHHHhcCCCeEEEEEEeeccC
Confidence 334 789999999999999752 25568899999999999998876654332
Q ss_pred CCcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEe
Q 037735 199 GIPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKM 258 (329)
Q Consensus 199 ~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~ 258 (329)
..+.. .. ..+..+.+|+++.++. |++++.+..
T Consensus 142 ~~~~~--------------------~~-----~~~~~~~~~l~~~~~~---f~~~~~~~~ 173 (199)
T 2xvm_A 142 DYPCT--------------------VG-----FPFAFKEGELRRYYEG---WERVKYNED 173 (199)
T ss_dssp SSCCC--------------------SC-----CSCCBCTTHHHHHTTT---SEEEEEECC
T ss_pred CcCCC--------------------CC-----CCCccCHHHHHHHhcC---CeEEEeccc
Confidence 21110 00 0345689999999874 999887643
No 77
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.97 E-value=2.5e-09 Score=102.64 Aligned_cols=155 Identities=17% Similarity=0.141 Sum_probs=100.4
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC----Ccceeeecccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ----SRSYYAAGVPGSF 116 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~----~~~~f~~gvpgsF 116 (329)
....+|+|+|||+|..+..+.+ + .|..+++..|+ .......-+.+.. .+--|. .++|
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~--------~-------~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~---~~d~ 238 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQ--------Y-------NKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGH---GANL 238 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHH--------H-------STTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEE---ECCC
T ss_pred cCCCEEEEeCCCcCHHHHHHHH--------h-------CCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEE---Eccc
Confidence 3567999999999999988875 3 35578999999 4454444333322 122344 3578
Q ss_pred ccc--cCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEec
Q 037735 117 YSS--LFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMF 194 (329)
Q Consensus 117 y~~--lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~ 194 (329)
++. .+| +++|+++++..+|.+++ .+...+|+..++.|+|||++++.-.
T Consensus 239 ~~~~~~~p-~~~D~v~~~~vlh~~~~-----------------------------~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (363)
T 3dp7_A 239 LDRDVPFP-TGFDAVWMSQFLDCFSE-----------------------------EEVISILTRVAQSIGKDSKVYIMET 288 (363)
T ss_dssp CSSSCCCC-CCCSEEEEESCSTTSCH-----------------------------HHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred cccCCCCC-CCcCEEEEechhhhCCH-----------------------------HHHHHHHHHHHHhcCCCcEEEEEee
Confidence 754 366 88999999999985432 2445889999999999999998765
Q ss_pred ccCCCCcccCCcccchHHHHHHHHHHH--HhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEE
Q 037735 195 SVPDGIPLVNNAAGSFYNTFGSCLVEL--TKMGILSKEKMYNPTPKELEGIIQRNGNFTIERME 256 (329)
Q Consensus 195 g~~~~~~~~~~~~~~~~~~l~~a~~~l--~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e 256 (329)
..++.... ...+. +......+ ...+- -..++.+|+++++++.| |+++++.
T Consensus 289 ~~~~~~~~-----~~~~~-~~~~~~~~~~~~~~~-----~~~~t~~e~~~ll~~AG-f~~v~~~ 340 (363)
T 3dp7_A 289 LWDRQRYE-----TASYC-LTQISLYFTAMANGN-----SKMFHSDDLIRCIENAG-LEVEEIQ 340 (363)
T ss_dssp CTTSCSSH-----HHHHH-HHHHHHHHHHSSCSS-----CCSCCHHHHHHHHHTTT-EEESCCC
T ss_pred ccCCcccc-----chhhH-HHHhhhhHHhhhCCC-----CcccCHHHHHHHHHHcC-CeEEEEE
Confidence 54432110 00111 11111111 11110 33569999999999984 9987765
No 78
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.96 E-value=1.9e-08 Score=94.77 Aligned_cols=149 Identities=15% Similarity=0.180 Sum_probs=98.5
Q ss_pred eEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC----Ccceeeeccccccccc
Q 037735 44 FRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ----SRSYYAAGVPGSFYSS 119 (329)
Q Consensus 44 ~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~----~~~~f~~gvpgsFy~~ 119 (329)
.+|+|+|||+|..+..+.+ + .|..+++..|+ .......-+.+.. .+--|.. +++.+
T Consensus 169 ~~vlDvG~G~G~~~~~l~~--------~-------~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~- 228 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQ--------A-------EPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVG---GDMLQ- 228 (334)
T ss_dssp CEEEEETCTTCHHHHHHHH--------H-------CTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEE---SCTTT-
T ss_pred CEEEEeCCCchHHHHHHHH--------H-------CCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEec---CCCCC-
Confidence 8999999999998888864 2 24568999999 5555554333321 1223433 57866
Q ss_pred cCCCCceeEEEecccee-cccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCC
Q 037735 120 LFPKSSLHFVHSSYTLH-WLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPD 198 (329)
Q Consensus 120 lfp~~s~dl~~Ss~alh-WLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~ 198 (329)
.+| +++|++++...+| | ++ .+...+|+..++.|+|||+|++.-...++
T Consensus 229 ~~~-~~~D~v~~~~vl~~~-~~-----------------------------~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 277 (334)
T 2ip2_A 229 EVP-SNGDIYLLSRIIGDL-DE-----------------------------AASLRLLGNCREAMAGDGRVVVIERTISA 277 (334)
T ss_dssp CCC-SSCSEEEEESCGGGC-CH-----------------------------HHHHHHHHHHHHHSCTTCEEEEEECCBCS
T ss_pred CCC-CCCCEEEEchhccCC-CH-----------------------------HHHHHHHHHHHHhcCCCCEEEEEEeccCC
Confidence 456 6899999999998 5 21 13358899999999999999999776543
Q ss_pred CCcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEe
Q 037735 199 GIPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKM 258 (329)
Q Consensus 199 ~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~ 258 (329)
.... .+..+.+. .-+...+ -..++.+|+.+++++.| |++.++...
T Consensus 278 ~~~~-------~~~~~~~~-~~~~~~~------~~~~t~~e~~~ll~~aG-f~~~~~~~~ 322 (334)
T 2ip2_A 278 SEPS-------PMSVLWDV-HLFMACA------GRHRTTEEVVDLLGRGG-FAVERIVDL 322 (334)
T ss_dssp SSCC-------HHHHHHHH-HHHHHHS------CCCCBHHHHHHHHHHTT-EEEEEEEEE
T ss_pred CCCc-------chhHHhhh-HhHhhCC------CcCCCHHHHHHHHHHCC-CceeEEEEC
Confidence 2210 11111111 1112112 23469999999999995 998877654
No 79
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.95 E-value=2.1e-09 Score=96.39 Aligned_cols=154 Identities=16% Similarity=0.058 Sum_probs=101.2
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeecccccccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSSL 120 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~l 120 (329)
.+..+|||+|||+|.++..+.. . .+ +|+..|+...+....-+..+..+--|+.+ ++.+..
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~--------~-------~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~~~---d~~~~~ 114 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQ--------F-------FP--RVIGLDVSKSALEIAAKENTAANISYRLL---DGLVPE 114 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHH--------H-------SS--CEEEEESCHHHHHHHHHHSCCTTEEEEEC---CTTCHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHH--------h-------CC--CEEEEECCHHHHHHHHHhCcccCceEEEC---cccccc
Confidence 3457899999999999998875 2 12 68999998877776666554333335544 343322
Q ss_pred CC-----CCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecc
Q 037735 121 FP-----KSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFS 195 (329)
Q Consensus 121 fp-----~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g 195 (329)
++ ..++|+++++.++||++. .|...+|+..++.|+|||+|++..++
T Consensus 115 ~~~~~~~~~~~d~v~~~~~~~~~~~-----------------------------~~~~~~l~~~~~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 115 QAAQIHSEIGDANIYMRTGFHHIPV-----------------------------EKRELLGQSLRILLGKQGAMYLIELG 165 (245)
T ss_dssp HHHHHHHHHCSCEEEEESSSTTSCG-----------------------------GGHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred cccccccccCccEEEEcchhhcCCH-----------------------------HHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 22 134899999999999742 25568899999999999999999887
Q ss_pred cCCCCcccCCcccchHHHHHH-------HHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEee
Q 037735 196 VPDGIPLVNNAAGSFYNTFGS-------CLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKMT 259 (329)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~l~~-------a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~~ 259 (329)
..+.. ++..+.. .+..+...|.. ....+.+|+.+.+ . +|+++......
T Consensus 166 ~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~--a-Gf~~~~~~~~~ 220 (245)
T 3ggd_A 166 TGCID---------FFNSLLEKYGQLPYELLLVMEHGIR----PGIFTAEDIELYF--P-DFEILSQGEGL 220 (245)
T ss_dssp TTHHH---------HHHHHHHHHSSCCHHHHHHHTTTCC----CCCCCHHHHHHHC--T-TEEEEEEECCB
T ss_pred ccccH---------HHHHHHhCCCCCchhhhhccccCCC----CCccCHHHHHHHh--C-CCEEEeccccc
Confidence 65421 1111111 11122222211 2335899999998 4 69998877543
No 80
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.94 E-value=8e-09 Score=99.26 Aligned_cols=150 Identities=17% Similarity=0.168 Sum_probs=97.8
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeecccccccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSSL 120 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~l 120 (329)
.+..+|+|+|||+|..+..+.+ + .|..+++.-|+ ...... .+..+ +--|. .++|++ .
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~--------~-------~~~~~~~~~D~-~~~~~~-a~~~~--~v~~~---~~d~~~-~ 264 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIIS--------K-------YPLIKGINFDL-PQVIEN-APPLS--GIEHV---GGDMFA-S 264 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHH--------H-------CTTCEEEEEEC-HHHHTT-CCCCT--TEEEE---ECCTTT-C
T ss_pred CCCCEEEEeCCCCcHHHHHHHH--------H-------CCCCeEEEeCh-HHHHHh-hhhcC--CCEEE---eCCccc-C
Confidence 3467999999999999988875 3 34578899999 334322 22222 12233 457876 5
Q ss_pred CCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCCCC
Q 037735 121 FPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPDGI 200 (329)
Q Consensus 121 fp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~~~ 200 (329)
+|. +|+++++.+||++++. +...+|+..++.|+|||+|++.-+..++..
T Consensus 265 ~~~--~D~v~~~~~lh~~~d~-----------------------------~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~ 313 (372)
T 1fp1_D 265 VPQ--GDAMILKAVCHNWSDE-----------------------------KCIEFLSNCHKALSPNGKVIIVEFILPEEP 313 (372)
T ss_dssp CCC--EEEEEEESSGGGSCHH-----------------------------HHHHHHHHHHHHEEEEEEEEEEEEEECSSC
T ss_pred CCC--CCEEEEecccccCCHH-----------------------------HHHHHHHHHHHhcCCCCEEEEEEeccCCCC
Confidence 665 8999999999975431 234889999999999999999866544321
Q ss_pred cccCCcccchHHHHHHHHHHH---HhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEe
Q 037735 201 PLVNNAAGSFYNTFGSCLVEL---TKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKM 258 (329)
Q Consensus 201 ~~~~~~~~~~~~~l~~a~~~l---~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~ 258 (329)
.. ...+.. ..+.++ +..| -..++.+|+++++++.| |++.++...
T Consensus 314 ~~------~~~~~~-~~~~d~~~~~~~~------~~~~t~~e~~~ll~~aG-f~~~~~~~~ 360 (372)
T 1fp1_D 314 NT------SEESKL-VSTLDNLMFITVG------GRERTEKQYEKLSKLSG-FSKFQVACR 360 (372)
T ss_dssp CS------SHHHHH-HHHHHHHHHHHHS------CCCEEHHHHHHHHHHTT-CSEEEEEEE
T ss_pred cc------chHHHH-HHHhhHHHHhccC------CccCCHHHHHHHHHHCC-CceEEEEEc
Confidence 10 011100 111111 1222 23469999999999994 998877653
No 81
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.94 E-value=3.9e-09 Score=100.88 Aligned_cols=154 Identities=20% Similarity=0.218 Sum_probs=99.2
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC----Ccceeeecccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ----SRSYYAAGVPGSF 116 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~----~~~~f~~gvpgsF 116 (329)
.+..+|+|+|||+|..+..+.+ + .|..+++..|+ .......-+.+.. .+--|.. +++
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~--------~-------~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~---~d~ 241 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIAL--------R-------APHLRGTLVEL-AGPAERARRRFADAGLADRVTVAE---GDF 241 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHH--------H-------CTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEE---CCT
T ss_pred CCCCEEEEECCCcCHHHHHHHH--------H-------CCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEe---CCC
Confidence 3467999999999998888865 2 24578999999 6665554333211 1223444 467
Q ss_pred ccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEec--
Q 037735 117 YSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMF-- 194 (329)
Q Consensus 117 y~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~-- 194 (329)
.+ .+|.+ +|+++++..+|++++. +...+|+..++.|+|||++++.-+
T Consensus 242 ~~-~~~~~-~D~v~~~~vl~~~~~~-----------------------------~~~~~l~~~~~~L~pgG~l~i~e~~~ 290 (374)
T 1qzz_A 242 FK-PLPVT-ADVVLLSFVLLNWSDE-----------------------------DALTILRGCVRALEPGGRLLVLDRAD 290 (374)
T ss_dssp TS-CCSCC-EEEEEEESCGGGSCHH-----------------------------HHHHHHHHHHHHEEEEEEEEEEECCH
T ss_pred CC-cCCCC-CCEEEEeccccCCCHH-----------------------------HHHHHHHHHHHhcCCCcEEEEEechh
Confidence 65 45654 9999999999874421 234789999999999999999877
Q ss_pred ccCCCCcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEee
Q 037735 195 SVPDGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKMT 259 (329)
Q Consensus 195 g~~~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~~ 259 (329)
..++... ..+..+.+.+. ++..| -..++.+|+.+++++.| |++.++....
T Consensus 291 ~~~~~~~-------~~~~~~~~~~~-~~~~~------~~~~~~~~~~~ll~~aG-f~~~~~~~~~ 340 (374)
T 1qzz_A 291 VEGDGAD-------RFFSTLLDLRM-LTFMG------GRVRTRDEVVDLAGSAG-LALASERTSG 340 (374)
T ss_dssp --------------HHHHHHHHHHH-HHHHS------CCCCCHHHHHHHHHTTT-EEEEEEEEEC
T ss_pred hcCCCCC-------cchhhhcchHH-HHhCC------CcCCCHHHHHHHHHHCC-CceEEEEECC
Confidence 4322110 11111111111 12223 34589999999999884 9998887653
No 82
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.93 E-value=1.1e-09 Score=103.04 Aligned_cols=112 Identities=11% Similarity=0.136 Sum_probs=77.2
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCC--c-------ceeeec-
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQS--R-------SYYAAG- 111 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~--~-------~~f~~g- 111 (329)
...+|||+|||+|..+..++. ....+|+..|+...+....-+..+.. . .-|..+
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~----------------~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d 111 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFY----------------GEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQET 111 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHH----------------TTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECC
T ss_pred CCCeEEEEecCCcHhHHHHHh----------------cCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhh
Confidence 457999999999987766542 11247999999988877654432110 0 013222
Q ss_pred cccccc-cc---cCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCc
Q 037735 112 VPGSFY-SS---LFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGG 187 (329)
Q Consensus 112 vpgsFy-~~---lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG 187 (329)
+-++.+ +. .+|++++|+|+|..++||+-+.+ |...+|+..++.|+|||
T Consensus 112 ~~~d~~~~~l~~~~~~~~FD~V~~~~~lhy~~~~~----------------------------~~~~~l~~~~r~LkpGG 163 (302)
T 2vdw_A 112 IRSDTFVSSVREVFYFGKFNIIDWQFAIHYSFHPR----------------------------HYATVMNNLSELTASGG 163 (302)
T ss_dssp TTSSSHHHHHHTTCCSSCEEEEEEESCGGGTCSTT----------------------------THHHHHHHHHHHEEEEE
T ss_pred cccchhhhhhhccccCCCeeEEEECchHHHhCCHH----------------------------HHHHHHHHHHHHcCCCC
Confidence 222332 22 36889999999999999974433 33588999999999999
Q ss_pred eEEEEecccC
Q 037735 188 LAALVMFSVP 197 (329)
Q Consensus 188 ~l~~~~~g~~ 197 (329)
+|+++++.+.
T Consensus 164 ~~i~~~~~~~ 173 (302)
T 2vdw_A 164 KVLITTMDGD 173 (302)
T ss_dssp EEEEEEECHH
T ss_pred EEEEEeCCHH
Confidence 9999998643
No 83
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.93 E-value=1.1e-08 Score=98.12 Aligned_cols=151 Identities=16% Similarity=0.179 Sum_probs=98.4
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC---Ccceeeecccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ---SRSYYAAGVPGSFYS 118 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~---~~~~f~~gvpgsFy~ 118 (329)
...+|+|+|||+|..+..+++ + .|..+++.-|+|. .....-+.+.. .+--| ++|+|++
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~--------~-------~p~~~~~~~dlp~-v~~~a~~~~~~~~~~rv~~---~~gD~~~ 239 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMS--------L-------YPGCKITVFDIPE-VVWTAKQHFSFQEEEQIDF---QEGDFFK 239 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHH--------H-------CSSCEEEEEECHH-HHHHHHHHSCC--CCSEEE---EESCTTT
T ss_pred cCCeEEeeCCCCCHHHHHHHH--------h-------CCCceeEeccCHH-HHHHHHHhhhhcccCceee---ecCcccc
Confidence 456899999999998888875 4 4668899999984 32222222221 12223 4578987
Q ss_pred ccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCC
Q 037735 119 SLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPD 198 (329)
Q Consensus 119 ~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~ 198 (329)
..+| ..|+++.+..||-.++ .+-.++|+..++.|+|||++++.=.-.++
T Consensus 240 ~~~~--~~D~~~~~~vlh~~~d-----------------------------~~~~~iL~~~~~al~pgg~lli~e~~~~~ 288 (353)
T 4a6d_A 240 DPLP--EADLYILARVLHDWAD-----------------------------GKCSHLLERIYHTCKPGGGILVIESLLDE 288 (353)
T ss_dssp SCCC--CCSEEEEESSGGGSCH-----------------------------HHHHHHHHHHHHHCCTTCEEEEEECCCCT
T ss_pred CCCC--CceEEEeeeecccCCH-----------------------------HHHHHHHHHHHhhCCCCCEEEEEEeeeCC
Confidence 6555 4699999999994332 13347899999999999999987654433
Q ss_pred CCcccCCcccchHHHHHHHHHHHHh-cCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEE
Q 037735 199 GIPLVNNAAGSFYNTFGSCLVELTK-MGILSKEKMYNPTPKELEGIIQRNGNFTIERMEK 257 (329)
Q Consensus 199 ~~~~~~~~~~~~~~~l~~a~~~l~~-eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~ 257 (329)
... ...+..+-+ +.-|+. .| --+|.+|+++++++.| |++.++..
T Consensus 289 ~~~------~~~~~~~~d-l~ml~~~~g-------~ert~~e~~~ll~~AG-f~~v~v~~ 333 (353)
T 4a6d_A 289 DRR------GPLLTQLYS-LNMLVQTEG-------QERTPTHYHMLLSSAG-FRDFQFKK 333 (353)
T ss_dssp TSC------CCHHHHHHH-HHHHHSSSC-------CCCCHHHHHHHHHHHT-CEEEEEEC
T ss_pred CCC------CCHHHHHHH-HHHHHhCCC-------cCCCHHHHHHHHHHCC-CceEEEEE
Confidence 211 111211111 112222 23 2479999999999995 99887653
No 84
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.92 E-value=9.5e-09 Score=87.72 Aligned_cols=129 Identities=14% Similarity=0.187 Sum_probs=93.6
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeecccccccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSSL 120 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~l 120 (329)
++..+|+|+|||+|..+..+.. . ..+++..|.........-+.++. .-+.. +++.+-.
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~--------~---------~~~v~~~D~~~~~~~~a~~~~~~--~~~~~---~d~~~~~ 102 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSK--------Q---------GHDVLGTDLDPILIDYAKQDFPE--ARWVV---GDLSVDQ 102 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHH--------T---------TCEEEEEESCHHHHHHHHHHCTT--SEEEE---CCTTTSC
T ss_pred cCCCeEEEECCCCCHHHHHHHH--------C---------CCcEEEEcCCHHHHHHHHHhCCC--CcEEE---cccccCC
Confidence 3457999999999999888764 1 14799999987666665555432 22333 3554444
Q ss_pred CCCCceeEEEec-cceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCCC
Q 037735 121 FPKSSLHFVHSS-YTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPDG 199 (329)
Q Consensus 121 fp~~s~dl~~Ss-~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~~ 199 (329)
+|++++|+|+++ ..+|+++. .+...+|+..++.|+|||.+++.+.....
T Consensus 103 ~~~~~~D~i~~~~~~~~~~~~-----------------------------~~~~~~l~~~~~~l~~~G~l~~~~~~~~~- 152 (195)
T 3cgg_A 103 ISETDFDLIVSAGNVMGFLAE-----------------------------DGREPALANIHRALGADGRAVIGFGAGRG- 152 (195)
T ss_dssp CCCCCEEEEEECCCCGGGSCH-----------------------------HHHHHHHHHHHHHEEEEEEEEEEEETTSS-
T ss_pred CCCCceeEEEECCcHHhhcCh-----------------------------HHHHHHHHHHHHHhCCCCEEEEEeCCCCC-
Confidence 778999999998 77887531 24568899999999999999998743211
Q ss_pred CcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEE
Q 037735 200 IPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEK 257 (329)
Q Consensus 200 ~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~ 257 (329)
.+.+++...++.. +|++.+...
T Consensus 153 -----------------------------------~~~~~~~~~l~~~-Gf~~~~~~~ 174 (195)
T 3cgg_A 153 -----------------------------------WVFGDFLEVAERV-GLELENAFE 174 (195)
T ss_dssp -----------------------------------CCHHHHHHHHHHH-TEEEEEEES
T ss_pred -----------------------------------cCHHHHHHHHHHc-CCEEeeeec
Confidence 4678889998888 499877654
No 85
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.91 E-value=4.7e-09 Score=96.54 Aligned_cols=138 Identities=15% Similarity=0.238 Sum_probs=95.4
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCC--cceeeeccccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQS--RSYYAAGVPGSFYSS 119 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~--~~~f~~gvpgsFy~~ 119 (329)
+..+|||+|||+|.++..+.. . ..+|+..|+.......+-+.+... +.-|..+ ++..
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~--------~---------g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~---d~~~- 178 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSL--------L---------GYDVTSWDHNENSIAFLNETKEKENLNISTALY---DINA- 178 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHH--------T---------TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEEC---CGGG-
T ss_pred CCCcEEEECCCCCHHHHHHHH--------C---------CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEe---cccc-
Confidence 457999999999999988864 1 258999999877766554433211 2233443 5543
Q ss_pred cCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCCC
Q 037735 120 LFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPDG 199 (329)
Q Consensus 120 lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~~ 199 (329)
+.+++++|+|+++.++||++. .++..+|+...+.|+|||.+++........
T Consensus 179 ~~~~~~fD~i~~~~~~~~~~~-----------------------------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~ 229 (286)
T 3m70_A 179 ANIQENYDFIVSTVVFMFLNR-----------------------------ERVPSIIKNMKEHTNVGGYNLIVAAMSTDD 229 (286)
T ss_dssp CCCCSCEEEEEECSSGGGSCG-----------------------------GGHHHHHHHHHHTEEEEEEEEEEEEBCCSS
T ss_pred ccccCCccEEEEccchhhCCH-----------------------------HHHHHHHHHHHHhcCCCcEEEEEEecCCCC
Confidence 333889999999999999753 256689999999999999988876644332
Q ss_pred CcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEE
Q 037735 200 IPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEK 257 (329)
Q Consensus 200 ~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~ 257 (329)
.+.. ... .+..+.+|+.+.++. |++...+.
T Consensus 230 ~~~~-------------------~~~------~~~~~~~~l~~~~~~---~~~~~~~~ 259 (286)
T 3m70_A 230 VPCP-------------------LPF------SFTFAENELKEYYKD---WEFLEYNE 259 (286)
T ss_dssp SCCS-------------------SCC------SCCBCTTHHHHHTTT---SEEEEEEC
T ss_pred CCCC-------------------CCc------cccCCHHHHHHHhcC---CEEEEEEc
Confidence 1110 000 455788999988753 99887763
No 86
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.91 E-value=4e-09 Score=91.83 Aligned_cols=111 Identities=18% Similarity=0.207 Sum_probs=80.2
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC--CCcceeeecccccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP--QSRSYYAAGVPGSFYS 118 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~--~~~~~f~~gvpgsFy~ 118 (329)
.+..+|+|+|||+|..+..++. . +..+++..|....+....-+.+. ..+..+..+ ++.+
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~--------~--------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~---d~~~ 82 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFV--------E--------DGYKTYGIEISDLQLKKAENFSRENNFKLNISKG---DIRK 82 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHH--------H--------TTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEEC---CTTS
T ss_pred CCCCEEEEECCCCCHHHHHHHH--------h--------CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEC---chhh
Confidence 3457999999999998766553 1 22589999998777665443321 111223443 4544
Q ss_pred ccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCC
Q 037735 119 SLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPD 198 (329)
Q Consensus 119 ~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~ 198 (329)
-.+|++++|+|+++.++|+++ + .|...+|+..++.|+|||++++..+.+++
T Consensus 83 ~~~~~~~fD~v~~~~~l~~~~--~---------------------------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 133 (209)
T 2p8j_A 83 LPFKDESMSFVYSYGTIFHMR--K---------------------------NDVKEAIDEIKRVLKPGGLACINFLTTKD 133 (209)
T ss_dssp CCSCTTCEEEEEECSCGGGSC--H---------------------------HHHHHHHHHHHHHEEEEEEEEEEEEETTS
T ss_pred CCCCCCceeEEEEcChHHhCC--H---------------------------HHHHHHHHHHHHHcCCCcEEEEEEecccc
Confidence 447889999999999999863 1 25668899999999999999999998765
Q ss_pred C
Q 037735 199 G 199 (329)
Q Consensus 199 ~ 199 (329)
.
T Consensus 134 ~ 134 (209)
T 2p8j_A 134 E 134 (209)
T ss_dssp T
T ss_pred h
Confidence 3
No 87
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.91 E-value=2.8e-09 Score=93.72 Aligned_cols=112 Identities=19% Similarity=0.226 Sum_probs=83.4
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeeccccccccccC
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSSLF 121 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~lf 121 (329)
+..+|+|+|||+|..+..+. .+++..|+.... .-+.. +++.+..+
T Consensus 67 ~~~~vLDiG~G~G~~~~~l~--------------------~~v~~~D~s~~~------------~~~~~---~d~~~~~~ 111 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSIR--------------------NPVHCFDLASLD------------PRVTV---CDMAQVPL 111 (215)
T ss_dssp TTSCEEEETCTTCHHHHHCC--------------------SCEEEEESSCSS------------TTEEE---SCTTSCSC
T ss_pred CCCeEEEECCcCCHHHHHhh--------------------ccEEEEeCCCCC------------ceEEE---eccccCCC
Confidence 45789999999999876551 367888887651 11222 34544447
Q ss_pred CCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCCCCc
Q 037735 122 PKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPDGIP 201 (329)
Q Consensus 122 p~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~~~~ 201 (329)
|++++|+|+++.++|| . |...+|+..++.|+|||+++++.+..
T Consensus 112 ~~~~fD~v~~~~~l~~-~-------------------------------~~~~~l~~~~~~L~~gG~l~i~~~~~----- 154 (215)
T 2zfu_A 112 EDESVDVAVFCLSLMG-T-------------------------------NIRDFLEEANRVLKPGGLLKVAEVSS----- 154 (215)
T ss_dssp CTTCEEEEEEESCCCS-S-------------------------------CHHHHHHHHHHHEEEEEEEEEEECGG-----
T ss_pred CCCCEeEEEEehhccc-c-------------------------------CHHHHHHHHHHhCCCCeEEEEEEcCC-----
Confidence 8899999999999996 2 33578999999999999999986432
Q ss_pred ccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEE
Q 037735 202 LVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEK 257 (329)
Q Consensus 202 ~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~ 257 (329)
.+++.+++.++++..| |+++....
T Consensus 155 -------------------------------~~~~~~~~~~~l~~~G-f~~~~~~~ 178 (215)
T 2zfu_A 155 -------------------------------RFEDVRTFLRAVTKLG-FKIVSKDL 178 (215)
T ss_dssp -------------------------------GCSCHHHHHHHHHHTT-EEEEEEEC
T ss_pred -------------------------------CCCCHHHHHHHHHHCC-CEEEEEec
Confidence 1247899999999884 99887653
No 88
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.90 E-value=1.6e-09 Score=98.24 Aligned_cols=146 Identities=18% Similarity=0.129 Sum_probs=90.8
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCC----cceeeecccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQS----RSYYAAGVPGSF 116 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~----~~~f~~gvpgsF 116 (329)
.+..+|||+|||||.+|..+.+ + ...+|+..|+..++.....+..+.. ..-+....++++
T Consensus 36 ~~g~~VLDiGcGtG~~t~~la~--------~--------g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~ 99 (232)
T 3opn_A 36 INGKTCLDIGSSTGGFTDVMLQ--------N--------GAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADF 99 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHH--------T--------TCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGC
T ss_pred CCCCEEEEEccCCCHHHHHHHh--------c--------CCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHc
Confidence 3456999999999999988875 1 1138999999988876644433210 000111122344
Q ss_pred ccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEeccc
Q 037735 117 YSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSV 196 (329)
Q Consensus 117 y~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~ 196 (329)
...+++..++|+++++. + .+|+..++.|+|||++++.+ .+
T Consensus 100 ~~~~~d~~~~D~v~~~l--------~-------------------------------~~l~~i~rvLkpgG~lv~~~-~p 139 (232)
T 3opn_A 100 EQGRPSFTSIDVSFISL--------D-------------------------------LILPPLYEILEKNGEVAALI-KP 139 (232)
T ss_dssp CSCCCSEEEECCSSSCG--------G-------------------------------GTHHHHHHHSCTTCEEEEEE-CH
T ss_pred CcCCCCEEEEEEEhhhH--------H-------------------------------HHHHHHHHhccCCCEEEEEE-Cc
Confidence 33345555677665542 2 45999999999999999965 11
Q ss_pred CCCCcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEee
Q 037735 197 PDGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKMT 259 (329)
Q Consensus 197 ~~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~~ 259 (329)
. | ...+..+-..|++.....+..+.+++.+.++.. +|++..++...
T Consensus 140 ~-------------~---e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~a-Gf~v~~~~~~p 185 (232)
T 3opn_A 140 Q-------------F---EAGREQVGKNGIIRDPKVHQMTIEKVLKTATQL-GFSVKGLTFSP 185 (232)
T ss_dssp H-------------H---HSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHH-TEEEEEEEECS
T ss_pred c-------------c---ccCHHHhCcCCeecCcchhHHHHHHHHHHHHHC-CCEEEEEEEcc
Confidence 1 1 111233333455433333345889999999988 49999887653
No 89
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.90 E-value=1.1e-08 Score=97.33 Aligned_cols=154 Identities=18% Similarity=0.185 Sum_probs=100.3
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC---C-Ccceeeecccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP---Q-SRSYYAAGVPGSF 116 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~---~-~~~~f~~gvpgsF 116 (329)
.+..+|+|+|||+|..+..+.. + .|..+++..|+ .......-+.+. . .+--|.. +++
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~--------~-------~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~---~d~ 242 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIAR--------R-------APHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVE---GDF 242 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHH--------H-------CTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEE---CCT
T ss_pred ccCcEEEEeCCcCcHHHHHHHH--------h-------CCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEe---CCC
Confidence 3457999999999999988874 2 34578999999 455554433321 1 1223444 467
Q ss_pred ccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecc-
Q 037735 117 YSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFS- 195 (329)
Q Consensus 117 y~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g- 195 (329)
.+ .+|.+ +|+++++..+|.+++ .+...+|+..++.|+|||++++.-+.
T Consensus 243 ~~-~~~~~-~D~v~~~~vl~~~~~-----------------------------~~~~~~l~~~~~~L~pgG~l~i~e~~~ 291 (360)
T 1tw3_A 243 FE-PLPRK-ADAIILSFVLLNWPD-----------------------------HDAVRILTRCAEALEPGGRILIHERDD 291 (360)
T ss_dssp TS-CCSSC-EEEEEEESCGGGSCH-----------------------------HHHHHHHHHHHHTEEEEEEEEEEECCB
T ss_pred CC-CCCCC-ccEEEEcccccCCCH-----------------------------HHHHHHHHHHHHhcCCCcEEEEEEEec
Confidence 65 45654 999999999986432 13357899999999999999998765
Q ss_pred cCCCCcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEee
Q 037735 196 VPDGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKMT 259 (329)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~~ 259 (329)
.++... ..+..+.+.+ -++..| -..++.+|+.+++++.| |++.++....
T Consensus 292 ~~~~~~-------~~~~~~~~~~-~~~~~~------~~~~t~~e~~~ll~~aG-f~~~~~~~~~ 340 (360)
T 1tw3_A 292 LHENSF-------NEQFTELDLR-MLVFLG------GALRTREKWDGLAASAG-LVVEEVRQLP 340 (360)
T ss_dssp CGGGCC-------SHHHHHHHHH-HHHHHS------CCCCBHHHHHHHHHHTT-EEEEEEEEEE
T ss_pred cCCCCC-------cchhhhccHH-HhhhcC------CcCCCHHHHHHHHHHCC-CeEEEEEeCC
Confidence 322110 0111111111 122223 35589999999999995 9998877654
No 90
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.89 E-value=1.5e-08 Score=96.60 Aligned_cols=153 Identities=11% Similarity=0.096 Sum_probs=101.5
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC----CCcceeeecccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP----QSRSYYAAGVPGSF 116 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~----~~~~~f~~gvpgsF 116 (329)
.+..+|+|+|||+|..+..+.+ + .|..+++..|+ .......-+.+. ..+--|.. +++
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~--------~-------~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~---~d~ 249 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLK--------H-------FPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIA---VDI 249 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHH--------H-------CTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEE---CCT
T ss_pred CCCCEEEEECCcccHHHHHHHH--------H-------CCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEe---Ccc
Confidence 4567999999999999988875 2 34578999999 556555433321 11223443 577
Q ss_pred ccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEeccc
Q 037735 117 YSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSV 196 (329)
Q Consensus 117 y~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~ 196 (329)
.+..+|+. |+++++..+|.+++ .+...+|+..++.|+|||++++.-+..
T Consensus 250 ~~~~~~~~--D~v~~~~vlh~~~d-----------------------------~~~~~~l~~~~~~L~pgG~l~i~e~~~ 298 (359)
T 1x19_A 250 YKESYPEA--DAVLFCRILYSANE-----------------------------QLSTIMCKKAFDAMRSGGRLLILDMVI 298 (359)
T ss_dssp TTSCCCCC--SEEEEESCGGGSCH-----------------------------HHHHHHHHHHHTTCCTTCEEEEEEECC
T ss_pred ccCCCCCC--CEEEEechhccCCH-----------------------------HHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 66556654 99999999985332 135688999999999999998887765
Q ss_pred CCCCcccCCcccchHHHHHHHHHHHH---hcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEe
Q 037735 197 PDGIPLVNNAAGSFYNTFGSCLVELT---KMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKM 258 (329)
Q Consensus 197 ~~~~~~~~~~~~~~~~~l~~a~~~l~---~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~ 258 (329)
++... ..+..+. .|. ..| .+...+++.+|+.+++++.| |++.+....
T Consensus 299 ~~~~~-------~~~~~~~----~~~~~~~~g---~~~~~~~t~~e~~~ll~~aG-f~~v~~~~~ 348 (359)
T 1x19_A 299 DDPEN-------PNFDYLS----HYILGAGMP---FSVLGFKEQARYKEILESLG-YKDVTMVRK 348 (359)
T ss_dssp CCTTS-------CCHHHHH----HHGGGGGSS---CCCCCCCCGGGHHHHHHHHT-CEEEEEEEE
T ss_pred CCCCC-------chHHHHH----HHHHhcCCC---CcccCCCCHHHHHHHHHHCC-CceEEEEec
Confidence 44211 1122211 221 112 11145589999999999984 998877654
No 91
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.88 E-value=2.4e-09 Score=98.60 Aligned_cols=110 Identities=18% Similarity=0.223 Sum_probs=79.6
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC---C----Ccceeeecccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP---Q----SRSYYAAGVPG 114 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~---~----~~~~f~~gvpg 114 (329)
+..+|||+|||+|..+..+.. . ..+|+..|+...+.....+... . .+-.+..+
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~--------~---------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~--- 116 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVE--------E---------GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEA--- 116 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHH--------T---------TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEEC---
T ss_pred CCCEEEEecCCCCHHHHHHHH--------C---------CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeec---
Confidence 457999999999999888864 1 1489999998877666544321 0 01123333
Q ss_pred cccccc---CCCCceeEEEec-cceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEE
Q 037735 115 SFYSSL---FPKSSLHFVHSS-YTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAA 190 (329)
Q Consensus 115 sFy~~l---fp~~s~dl~~Ss-~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~ 190 (329)
++.... ++++++|+|+++ .++|++.+.... ..++..+|+..++.|+|||+|+
T Consensus 117 d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~------------------------~~~~~~~l~~~~~~LkpgG~l~ 172 (293)
T 3thr_A 117 NWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGD------------------------QSEHRLALKNIASMVRPGGLLV 172 (293)
T ss_dssp CGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSS------------------------SHHHHHHHHHHHHTEEEEEEEE
T ss_pred ChhhCccccccCCCeEEEEEcChHHhhcCccccC------------------------HHHHHHHHHHHHHHcCCCeEEE
Confidence 454433 789999999999 899998763311 1356789999999999999999
Q ss_pred EEecc
Q 037735 191 LVMFS 195 (329)
Q Consensus 191 ~~~~g 195 (329)
++...
T Consensus 173 ~~~~~ 177 (293)
T 3thr_A 173 IDHRN 177 (293)
T ss_dssp EEEEC
T ss_pred EEeCC
Confidence 99864
No 92
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.88 E-value=3.8e-09 Score=94.04 Aligned_cols=104 Identities=20% Similarity=0.279 Sum_probs=74.7
Q ss_pred ceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC--CCcceeeecccccccccc
Q 037735 43 TFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP--QSRSYYAAGVPGSFYSSL 120 (329)
Q Consensus 43 ~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~--~~~~~f~~gvpgsFy~~l 120 (329)
..+|+|+|||+|..+..+.+ . .+++..|+..++....-+.+. ....-+..+ ++.+-.
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~----------------~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~---d~~~~~ 92 (243)
T 3d2l_A 34 GKRIADIGCGTGTATLLLAD----------------H--YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQ---DMRELE 92 (243)
T ss_dssp TCEEEEESCTTCHHHHHHTT----------------T--SEEEEEESCHHHHHHHHHHHHHTTCCCEEEEC---CGGGCC
T ss_pred CCeEEEecCCCCHHHHHHhh----------------C--CeEEEEECCHHHHHHHHHhhhhcCCceEEEEc---ChhhcC
Confidence 47999999999998887753 1 479999998777665544332 112233443 454333
Q ss_pred CCCCceeEEEecc-ceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEeccc
Q 037735 121 FPKSSLHFVHSSY-TLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSV 196 (329)
Q Consensus 121 fp~~s~dl~~Ss~-alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~ 196 (329)
++ +++|+|+++. ++||+... .|...+|+..++.|+|||.+++.+..+
T Consensus 93 ~~-~~fD~v~~~~~~~~~~~~~----------------------------~~~~~~l~~~~~~L~pgG~l~~~~~~~ 140 (243)
T 3d2l_A 93 LP-EPVDAITILCDSLNYLQTE----------------------------ADVKQTFDSAARLLTDGGKLLFDVHSP 140 (243)
T ss_dssp CS-SCEEEEEECTTGGGGCCSH----------------------------HHHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred CC-CCcCEEEEeCCchhhcCCH----------------------------HHHHHHHHHHHHhcCCCeEEEEEcCCH
Confidence 44 8999999987 99997432 256688999999999999999987654
No 93
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.87 E-value=7.4e-09 Score=97.34 Aligned_cols=145 Identities=17% Similarity=0.137 Sum_probs=92.8
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeecccccc--c-
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSF--Y- 117 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsF--y- 117 (329)
.+..+|||+|||||.+|..+++ .+..+|+.-|+..++.....+.-+. ...... .++ .
T Consensus 84 ~~g~~vLDiGcGTG~~t~~L~~----------------~ga~~V~aVDvs~~mL~~a~r~~~r--v~~~~~--~ni~~l~ 143 (291)
T 3hp7_A 84 VEDMITIDIGASTGGFTDVMLQ----------------NGAKLVYAVDVGTNQLVWKLRQDDR--VRSMEQ--YNFRYAE 143 (291)
T ss_dssp CTTCEEEEETCTTSHHHHHHHH----------------TTCSEEEEECSSSSCSCHHHHTCTT--EEEECS--CCGGGCC
T ss_pred ccccEEEecCCCccHHHHHHHh----------------CCCCEEEEEECCHHHHHHHHHhCcc--cceecc--cCceecc
Confidence 3456999999999999988875 1224899999999887663332221 111000 011 0
Q ss_pred cccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccC
Q 037735 118 SSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVP 197 (329)
Q Consensus 118 ~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~ 197 (329)
..-+|..++|++++..++||+. .+|..-++.|+|||.|++.. .+.
T Consensus 144 ~~~l~~~~fD~v~~d~sf~sl~----------------------------------~vL~e~~rvLkpGG~lv~lv-kPq 188 (291)
T 3hp7_A 144 PVDFTEGLPSFASIDVSFISLN----------------------------------LILPALAKILVDGGQVVALV-KPQ 188 (291)
T ss_dssp GGGCTTCCCSEEEECCSSSCGG----------------------------------GTHHHHHHHSCTTCEEEEEE-CGG
T ss_pred hhhCCCCCCCEEEEEeeHhhHH----------------------------------HHHHHHHHHcCcCCEEEEEE-Ccc
Confidence 1124666799999999999873 33899999999999999973 211
Q ss_pred CCCcccCCcccchHHHHHHHHHHHH-hcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEe
Q 037735 198 DGIPLVNNAAGSFYNTFGSCLVELT-KMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKM 258 (329)
Q Consensus 198 ~~~~~~~~~~~~~~~~l~~a~~~l~-~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~ 258 (329)
-. .. ++-+ ..|.+.....+..+.+++.+.++.. +|.+..+...
T Consensus 189 fe--~~---------------~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~-Gf~v~~~~~s 232 (291)
T 3hp7_A 189 FE--AG---------------REQIGKNGIVRESSIHEKVLETVTAFAVDY-GFSVKGLDFS 232 (291)
T ss_dssp GT--SC---------------GGGCC-CCCCCCHHHHHHHHHHHHHHHHHT-TEEEEEEEEC
T ss_pred cc--cC---------------hhhcCCCCccCCHHHHHHHHHHHHHHHHHC-CCEEEEEEEC
Confidence 10 00 0001 1244332224445789999999988 5999887765
No 94
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.87 E-value=2.6e-09 Score=95.70 Aligned_cols=141 Identities=12% Similarity=0.051 Sum_probs=87.7
Q ss_pred HHHHHHHHHhHhhHHHHHh----hcccCCCCCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCC
Q 037735 15 AYQSIQVYILRYDPRTAVT----DLGTNAVPNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHS 90 (329)
Q Consensus 15 ~~Q~~~~~~~~~~l~~ai~----~i~~~~~~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp 90 (329)
..|++..+++.|.+.-... ++...+....-+|+|+|||+|..+..+.. . .|+..|+..|+.
T Consensus 3 ~~q~~~~~~~~~~~~~~~~~~~~d~~~~f~~~~~~vLDiGcG~G~~~~~lA~--------~-------~p~~~v~giD~s 67 (218)
T 3dxy_A 3 SGQEHALENYWPVMGVEFSEDMLDFPALFGREAPVTLEIGFGMGASLVAMAK--------D-------RPEQDFLGIEVH 67 (218)
T ss_dssp ----CHHHHHHHHHBCCCCSSCCCHHHHHSSCCCEEEEESCTTCHHHHHHHH--------H-------CTTSEEEEECSC
T ss_pred HHHHHHHHHHhHHhCCCCCCCCCCHHHHcCCCCCeEEEEeeeChHHHHHHHH--------H-------CCCCeEEEEEec
Confidence 4577788877776541100 00000123456899999999999988864 2 455789999999
Q ss_pred cchHHhhhhcCC---CCcceeeeccccccccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHH
Q 037735 91 DNDFNTLFKSLP---QSRSYYAAGVPGSFYSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQ 167 (329)
Q Consensus 91 ~ndfn~lf~~l~---~~~~~f~~gvpgsFy~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q 167 (329)
.+....+-+... ...-.|+.+....+....+|++++|.+++++...|...... +.++
T Consensus 68 ~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~~~p~~~~~~~----~rr~---------------- 127 (218)
T 3dxy_A 68 SPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFFPDPWHKARHN----KRRI---------------- 127 (218)
T ss_dssp HHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEESCCCCCSGGGG----GGSS----------------
T ss_pred HHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeCCCCccchhhh----hhhh----------------
Confidence 887776554431 11223555432233334589999999999998888432110 0000
Q ss_pred HhhcHHHHHHHHHHHhccCceEEEEe
Q 037735 168 FNNDFQTFLNTRAQELVPGGLAALVM 193 (329)
Q Consensus 168 ~~~D~~~FL~~ra~eL~pGG~l~~~~ 193 (329)
.-..||+..++.|+|||.|++.+
T Consensus 128 ---~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 128 ---VQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp ---CSHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---hhHHHHHHHHHHcCCCcEEEEEe
Confidence 00258999999999999999987
No 95
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.86 E-value=8.9e-09 Score=93.82 Aligned_cols=107 Identities=10% Similarity=0.021 Sum_probs=81.6
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCc-ceeeecccccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSR-SYYAAGVPGSFYSSL 120 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~-~~f~~gvpgsFy~~l 120 (329)
+-.+|+|+|||+|..|..+.+.+ -|+-.|+.-|....+...+-+...... ...+.+..++...-.
T Consensus 77 pG~~VldlG~G~G~~~~~la~~V--------------G~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~ 142 (233)
T 4df3_A 77 EGDRILYLGIASGTTASHMSDII--------------GPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYR 142 (233)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH--------------CTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGT
T ss_pred CCCEEEEecCcCCHHHHHHHHHh--------------CCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccc
Confidence 45799999999999999997644 456789999999888777665554332 346677777765556
Q ss_pred CCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecc
Q 037735 121 FPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFS 195 (329)
Q Consensus 121 fp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g 195 (329)
++.+++|++++..+.+| |-..++....+-|+|||+++++.-.
T Consensus 143 ~~~~~vDvVf~d~~~~~---------------------------------~~~~~l~~~~r~LKpGG~lvI~ik~ 184 (233)
T 4df3_A 143 HLVEGVDGLYADVAQPE---------------------------------QAAIVVRNARFFLRDGGYMLMAIKA 184 (233)
T ss_dssp TTCCCEEEEEECCCCTT---------------------------------HHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cccceEEEEEEeccCCh---------------------------------hHHHHHHHHHHhccCCCEEEEEEec
Confidence 78899999997666555 2236789999999999999998743
No 96
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.85 E-value=4.5e-08 Score=83.77 Aligned_cols=126 Identities=13% Similarity=0.102 Sum_probs=87.7
Q ss_pred ceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeeccccccccccCC
Q 037735 43 TFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSSLFP 122 (329)
Q Consensus 43 ~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~lfp 122 (329)
..+|+|+|||+|..+..+.+ .- +|+..|+...+... .+ +--|..| ++.+ .++
T Consensus 24 ~~~vLD~GcG~G~~~~~l~~----------------~~--~v~gvD~s~~~~~~-----~~-~~~~~~~---d~~~-~~~ 75 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLRK----------------RN--TVVSTDLNIRALES-----HR-GGNLVRA---DLLC-SIN 75 (170)
T ss_dssp SCEEEEETCTTCHHHHHHTT----------------TS--EEEEEESCHHHHHT-----CS-SSCEEEC---STTT-TBC
T ss_pred CCeEEEeccCccHHHHHHHh----------------cC--cEEEEECCHHHHhc-----cc-CCeEEEC---Chhh-hcc
Confidence 45999999999999988863 11 79999998776554 11 2234443 5644 667
Q ss_pred CCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCCCCcc
Q 037735 123 KSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPDGIPL 202 (329)
Q Consensus 123 ~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~~~~~ 202 (329)
++++|+++|+..+||.++.+.. .. ..|...+++...+.| |||++++...+.
T Consensus 76 ~~~fD~i~~n~~~~~~~~~~~~--~~--------------------~~~~~~~~~~~~~~l-pgG~l~~~~~~~------ 126 (170)
T 3q87_B 76 QESVDVVVFNPPYVPDTDDPII--GG--------------------GYLGREVIDRFVDAV-TVGMLYLLVIEA------ 126 (170)
T ss_dssp GGGCSEEEECCCCBTTCCCTTT--BC--------------------CGGGCHHHHHHHHHC-CSSEEEEEEEGG------
T ss_pred cCCCCEEEECCCCccCCccccc--cC--------------------CcchHHHHHHHHhhC-CCCEEEEEEecC------
Confidence 7999999999999997765311 00 012235677777778 999999987443
Q ss_pred cCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEe
Q 037735 203 VNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKM 258 (329)
Q Consensus 203 ~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~ 258 (329)
.+.+++.+.+++.| |++..+...
T Consensus 127 --------------------------------~~~~~l~~~l~~~g-f~~~~~~~~ 149 (170)
T 3q87_B 127 --------------------------------NRPKEVLARLEERG-YGTRILKVR 149 (170)
T ss_dssp --------------------------------GCHHHHHHHHHHTT-CEEEEEEEE
T ss_pred --------------------------------CCHHHHHHHHHHCC-CcEEEEEee
Confidence 23677788888874 888776654
No 97
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.84 E-value=5.9e-09 Score=94.79 Aligned_cols=154 Identities=16% Similarity=0.224 Sum_probs=99.2
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeeccccccccccC
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSSLF 121 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~lf 121 (329)
+..+|+|+|||+|.++..+.. . ..+++..|+...+....-+.... . +..+ ++....+
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~--------~---------~~~v~gvD~s~~~l~~a~~~~~~--~-~~~~---d~~~~~~ 110 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQE--------R---------GFEVVLVDPSKEMLEVAREKGVK--N-VVEA---KAEDLPF 110 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHT--------T---------TCEEEEEESCHHHHHHHHHHTCS--C-EEEC---CTTSCCS
T ss_pred CCCeEEEeCCCcCHHHHHHHH--------c---------CCeEEEEeCCHHHHHHHHhhcCC--C-EEEC---cHHHCCC
Confidence 567999999999999988763 1 14799999988776665554432 2 4444 5544457
Q ss_pred CCCceeEEEecc-ceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCCCC
Q 037735 122 PKSSLHFVHSSY-TLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPDGI 200 (329)
Q Consensus 122 p~~s~dl~~Ss~-alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~~~ 200 (329)
|++++|+|+++. .+||..+ ...+|+..++.|+|||++++.++++....
T Consensus 111 ~~~~fD~v~~~~~~~~~~~~-------------------------------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~ 159 (260)
T 2avn_A 111 PSGAFEAVLALGDVLSYVEN-------------------------------KDKAFSEIRRVLVPDGLLIATVDNFYTFL 159 (260)
T ss_dssp CTTCEEEEEECSSHHHHCSC-------------------------------HHHHHHHHHHHEEEEEEEEEEEEBHHHHH
T ss_pred CCCCEEEEEEcchhhhcccc-------------------------------HHHHHHHHHHHcCCCeEEEEEeCChHHHH
Confidence 889999999976 5677543 34789999999999999999998753200
Q ss_pred cccCCcccchHHHHHHHHHHHHhcCCcCCCc------ccCCCHHHHHHHHHhCCceEEeEEEEee
Q 037735 201 PLVNNAAGSFYNTFGSCLVELTKMGILSKEK------MYNPTPKELEGIIQRNGNFTIERMEKMT 259 (329)
Q Consensus 201 ~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~------~y~ps~eE~~~~i~~~g~f~i~~~e~~~ 259 (329)
. .......|+.+ ..+...|...... .++.+++|+.++ . +|+++++....
T Consensus 160 ~--~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l---a-Gf~~~~~~~~~ 214 (260)
T 2avn_A 160 Q--QMIEKDAWDQI----TRFLKTQTTSVGTTLFSFNSYAFKPEDLDSL---E-GFETVDIRGIG 214 (260)
T ss_dssp H--HHHHTTCHHHH----HHHHHHCEEEEECSSEEEEEECBCGGGGSSC---T-TEEEEEEEEEC
T ss_pred H--HhhcchhHHHH----HHHHhccccccCCCceeEEEeccCHHHHHHh---c-CceEEEEECCC
Confidence 0 00000012111 2223334322111 236788898877 4 69998887653
No 98
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.81 E-value=5.1e-09 Score=96.96 Aligned_cols=101 Identities=14% Similarity=0.045 Sum_probs=74.5
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeecccccccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSSL 120 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~l 120 (329)
.+..+|||+|||+|.+|..+.+ + ..+|+..|+..++...+-+.+... + +.+++..-.
T Consensus 44 ~~g~~VLDlGcGtG~~a~~La~--------~---------g~~V~gvD~S~~ml~~Ar~~~~~~---~---v~~~~~~~~ 100 (261)
T 3iv6_A 44 VPGSTVAVIGASTRFLIEKALE--------R---------GASVTVFDFSQRMCDDLAEALADR---C---VTIDLLDIT 100 (261)
T ss_dssp CTTCEEEEECTTCHHHHHHHHH--------T---------TCEEEEEESCHHHHHHHHHHTSSS---C---CEEEECCTT
T ss_pred CCcCEEEEEeCcchHHHHHHHh--------c---------CCEEEEEECCHHHHHHHHHHHHhc---c---ceeeeeecc
Confidence 3457999999999999998874 1 147999999998887776665432 1 222342211
Q ss_pred C-----CCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEec
Q 037735 121 F-----PKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMF 194 (329)
Q Consensus 121 f-----p~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~ 194 (329)
. +++++|+|+|+.++||+.. .|+..+|+..++.| |||+|++++.
T Consensus 101 ~~~~~~~~~~fD~Vv~~~~l~~~~~-----------------------------~~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 101 AEIPKELAGHFDFVLNDRLINRFTT-----------------------------EEARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp SCCCGGGTTCCSEEEEESCGGGSCH-----------------------------HHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred cccccccCCCccEEEEhhhhHhCCH-----------------------------HHHHHHHHHHHHhC-cCcEEEEEec
Confidence 1 2679999999999998631 25567888999999 9999999975
No 99
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.80 E-value=4e-08 Score=86.57 Aligned_cols=144 Identities=12% Similarity=0.023 Sum_probs=89.4
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC------CC-Ccceeeeccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL------PQ-SRSYYAAGVP 113 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l------~~-~~~~f~~gvp 113 (329)
.+..+|+|+|||+|.++..+.. . .|..+|+..|+...+...+.+.. .. .+-.|..+
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~--------~-------~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~-- 88 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVAR--------Q-------NPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWA-- 88 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHH--------H-------CTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEEC--
T ss_pred cCCCEEEEecCCCCHHHHHHHH--------H-------CCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEec--
Confidence 4568999999999999998875 2 34478999999988777542111 11 12235554
Q ss_pred cccccccCCCCceeEEE---ecccee--cccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCce
Q 037735 114 GSFYSSLFPKSSLHFVH---SSYTLH--WLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGL 188 (329)
Q Consensus 114 gsFy~~lfp~~s~dl~~---Ss~alh--WLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~ 188 (329)
++.+-.+++++ |.++ +...+| |+.+. ..+|+..++.|+|||+
T Consensus 89 -d~~~l~~~~~~-d~v~~~~~~~~~~~~~~~~~-------------------------------~~~l~~~~~~LkpgG~ 135 (218)
T 3mq2_A 89 -TAERLPPLSGV-GELHVLMPWGSLLRGVLGSS-------------------------------PEMLRGMAAVCRPGAS 135 (218)
T ss_dssp -CSTTCCSCCCE-EEEEEESCCHHHHHHHHTSS-------------------------------SHHHHHHHHTEEEEEE
T ss_pred -chhhCCCCCCC-CEEEEEccchhhhhhhhccH-------------------------------HHHHHHHHHHcCCCcE
Confidence 56554467776 7766 222221 33332 3789999999999999
Q ss_pred EEEEecccCCCCcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCC----HHHHHHHHHhCCceEEeEEEEee
Q 037735 189 AALVMFSVPDGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPT----PKELEGIIQRNGNFTIERMEKMT 259 (329)
Q Consensus 189 l~~~~~g~~~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps----~eE~~~~i~~~g~f~i~~~e~~~ 259 (329)
+++++....-..... ++ .+ ...++ .+++...++.. +|++..++.+.
T Consensus 136 l~~~~~~~~~~~~~~----------------~~--~~------~~~~~~~~~~~~l~~~l~~a-Gf~i~~~~~~~ 185 (218)
T 3mq2_A 136 FLVALNLHAWRPSVP----------------EV--GE------HPEPTPDSADEWLAPRYAEA-GWKLADCRYLE 185 (218)
T ss_dssp EEEEEEGGGBTTBCG----------------GG--TT------CCCCCHHHHHHHHHHHHHHT-TEEEEEEEEEC
T ss_pred EEEEecccccccccc----------------cc--cc------CCccchHHHHHHHHHHHHHc-CCCceeeeccc
Confidence 999664322111110 00 01 11122 34577788888 59999988763
No 100
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.76 E-value=8.2e-09 Score=96.05 Aligned_cols=110 Identities=14% Similarity=0.195 Sum_probs=75.0
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC------------------
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ------------------ 103 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~------------------ 103 (329)
...+|||+|||+|..|..+.. ++ +..+|+..|+...+....-+.+..
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~--------~~-------~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~ 110 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIAC--------KW-------GPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPG 110 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHH--------HT-------CCSEEEEEESCHHHHHHHHHTC--------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHH--------Hc-------CCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccc
Confidence 457999999999999998875 21 235888999876665554433211
Q ss_pred -------------------------------------------Ccceeeecccccccccc-----CCCCceeEEEeccce
Q 037735 104 -------------------------------------------SRSYYAAGVPGSFYSSL-----FPKSSLHFVHSSYTL 135 (329)
Q Consensus 104 -------------------------------------------~~~~f~~gvpgsFy~~l-----fp~~s~dl~~Ss~al 135 (329)
....|.. +++.... ++++++|+|+|..++
T Consensus 111 ~~~~~~~~~~~~~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~---~d~~~~~~~~~~~~~~~fD~I~~~~vl 187 (292)
T 3g07_A 111 AEGEEGTTTVRKRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVT---GNYVLDRDDLVEAQTPEYDVVLCLSLT 187 (292)
T ss_dssp -------------------------------CCSSTTCCSSTTTTEEEEE---CCCCCSSHHHHTTCCCCEEEEEEESCH
T ss_pred cccccccccccccccccchhhhccCccccccccccccccccccccceEEe---cccccCccccccccCCCcCEEEEChHH
Confidence 0112333 2443222 478999999999999
Q ss_pred ecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEec
Q 037735 136 HWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMF 194 (329)
Q Consensus 136 hWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~ 194 (329)
+|+.-. .-..++.++|+..++.|+|||+|++...
T Consensus 188 ~~ihl~-------------------------~~~~~~~~~l~~~~~~LkpGG~lil~~~ 221 (292)
T 3g07_A 188 KWVHLN-------------------------WGDEGLKRMFRRIYRHLRPGGILVLEPQ 221 (292)
T ss_dssp HHHHHH-------------------------HHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred HHhhhc-------------------------CCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 996300 0123567899999999999999999653
No 101
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.76 E-value=2.3e-08 Score=95.49 Aligned_cols=151 Identities=17% Similarity=0.142 Sum_probs=96.2
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeeccccccccccC
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSSLF 121 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~lf 121 (329)
+..+|+|+|||+|..+..+.+ + .|..+++.-|+| ..... .+.++ .--| +.++|++ .+
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~--------~-------~p~~~~~~~D~~-~~~~~-a~~~~--~v~~---~~~d~~~-~~ 249 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHE--------I-------FPHLKCTVFDQP-QVVGN-LTGNE--NLNF---VGGDMFK-SI 249 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHH--------H-------CTTSEEEEEECH-HHHSS-CCCCS--SEEE---EECCTTT-CC
T ss_pred CCCEEEEECCCcCHHHHHHHH--------H-------CCCCeEEEeccH-HHHhh-cccCC--CcEE---EeCccCC-CC
Confidence 347999999999999998875 3 345678888995 34322 22221 1123 3467877 56
Q ss_pred CCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhcc---CceEEEEecccCC
Q 037735 122 PKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVP---GGLAALVMFSVPD 198 (329)
Q Consensus 122 p~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~p---GG~l~~~~~g~~~ 198 (329)
| ++|+++++..||++++. +...+|+..++.|+| ||++++.-+..++
T Consensus 250 ~--~~D~v~~~~vlh~~~d~-----------------------------~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~ 298 (358)
T 1zg3_A 250 P--SADAVLLKWVLHDWNDE-----------------------------QSLKILKNSKEAISHKGKDGKVIIIDISIDE 298 (358)
T ss_dssp C--CCSEEEEESCGGGSCHH-----------------------------HHHHHHHHHHHHTGGGGGGCEEEEEECEECT
T ss_pred C--CceEEEEcccccCCCHH-----------------------------HHHHHHHHHHHhCCCCCCCcEEEEEEeccCC
Confidence 6 49999999999985431 234889999999999 9999998765443
Q ss_pred CCcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEE
Q 037735 199 GIPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEK 257 (329)
Q Consensus 199 ~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~ 257 (329)
...... . .....+.+. .-|+..| -..++.+|+.+++++.| |++.++..
T Consensus 299 ~~~~~~--~-~~~~~~~d~-~~~~~~~------g~~~t~~e~~~ll~~aG-f~~~~~~~ 346 (358)
T 1zg3_A 299 TSDDRG--L-TELQLDYDL-VMLTMFL------GKERTKQEWEKLIYDAG-FSSYKITP 346 (358)
T ss_dssp TCSCHH--H-HHHHHHHHH-HHHHHHS------CCCEEHHHHHHHHHHTT-CCEEEEEE
T ss_pred CCccch--h-hhHHHhhCH-HHhccCC------CCCCCHHHHHHHHHHcC-CCeeEEEe
Confidence 211000 0 001111111 1111122 23479999999999995 99887765
No 102
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.75 E-value=5.7e-08 Score=84.43 Aligned_cols=122 Identities=17% Similarity=0.132 Sum_probs=83.1
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCC-cceeeeccccccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQS-RSYYAAGVPGSFYSS 119 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~-~~~f~~gvpgsFy~~ 119 (329)
.+..+|+|+|||+|..+..+.. . .+. +++..|+........-+..... +..+..+ ++.+-
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~--------~-------~~~-~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~---d~~~~ 101 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFL--------G-------GFP-NVTSVDYSSVVVAAMQACYAHVPQLRWETM---DVRKL 101 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHH--------T-------TCC-CEEEEESCHHHHHHHHHHTTTCTTCEEEEC---CTTSC
T ss_pred CCCCeEEEECCCCcHHHHHHHH--------c-------CCC-cEEEEeCCHHHHHHHHHhcccCCCcEEEEc---chhcC
Confidence 3457899999999999988864 1 122 7999999877766655544321 2234443 45443
Q ss_pred cCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccC
Q 037735 120 LFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVP 197 (329)
Q Consensus 120 lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~ 197 (329)
.++++++|+|+++.++|.+.......|.. .+ ....|...+|+...+.|+|||++++..++.+
T Consensus 102 ~~~~~~fD~v~~~~~~~~~~~~~~~~~~~--------~~--------~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~ 163 (215)
T 2pxx_A 102 DFPSASFDVVLEKGTLDALLAGERDPWTV--------SS--------EGVHTVDQVLSEVSRVLVPGGRFISMTSAAP 163 (215)
T ss_dssp CSCSSCEEEEEEESHHHHHTTTCSCTTSC--------CH--------HHHHHHHHHHHHHHHHEEEEEEEEEEESCCH
T ss_pred CCCCCcccEEEECcchhhhcccccccccc--------cc--------chhHHHHHHHHHHHHhCcCCCEEEEEeCCCc
Confidence 57889999999999998765322111221 00 1124667899999999999999999998764
No 103
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.75 E-value=8.6e-09 Score=90.74 Aligned_cols=106 Identities=13% Similarity=0.195 Sum_probs=74.5
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC--CCcceeeeccccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP--QSRSYYAAGVPGSFYSS 119 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~--~~~~~f~~gvpgsFy~~ 119 (329)
...+|+|+|||+|..+..+.. . .+ +++..|+........-+... ..+--+..+ ++.+.
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~--------~-------~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~---d~~~~ 97 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLED--------Y-------GF--EVVGVDISEDMIRKAREYAKSRESNVEFIVG---DARKL 97 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHH--------T-------TC--EEEEEESCHHHHHHHHHHHHHTTCCCEEEEC---CTTSC
T ss_pred CCCeEEEEeccCCHHHHHHHH--------c-------CC--EEEEEECCHHHHHHHHHHHHhcCCCceEEEC---chhcC
Confidence 367999999999998877754 1 22 79999998766555433321 112234443 56444
Q ss_pred cCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEeccc
Q 037735 120 LFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSV 196 (329)
Q Consensus 120 lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~ 196 (329)
.+|++++|+|+++.++|+.. . .|...+|+..++.|+|||++++..+..
T Consensus 98 ~~~~~~~D~v~~~~~~~~~~-~----------------------------~~~~~~l~~~~~~L~~gG~l~~~~~~~ 145 (227)
T 1ve3_A 98 SFEDKTFDYVIFIDSIVHFE-P----------------------------LELNQVFKEVRRVLKPSGKFIMYFTDL 145 (227)
T ss_dssp CSCTTCEEEEEEESCGGGCC-H----------------------------HHHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred CCCCCcEEEEEEcCchHhCC-H----------------------------HHHHHHHHHHHHHcCCCcEEEEEecCh
Confidence 47888999999999955422 1 245688999999999999999998753
No 104
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.73 E-value=2.8e-08 Score=86.75 Aligned_cols=122 Identities=14% Similarity=0.135 Sum_probs=84.8
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC---CCcceeeecccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP---QSRSYYAAGVPGSFYS 118 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~---~~~~~f~~gvpgsFy~ 118 (329)
+..+|+|+|||+|..+..+.+ .+..+++..|+........-+.+. ...--+..+ ++..
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~~----------------~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~---d~~~ 120 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAHK----------------LGAKSVLATDISDESMTAAEENAALNGIYDIALQKT---SLLA 120 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHHH----------------TTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEES---STTT
T ss_pred CCCEEEEECCCCCHHHHHHHH----------------CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEec---cccc
Confidence 457999999999998887653 122489999998766555443322 111223333 4433
Q ss_pred ccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCC
Q 037735 119 SLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPD 198 (329)
Q Consensus 119 ~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~ 198 (329)
++++++|+|+++..+||+ ..+|+...+.|+|||.++++.+...
T Consensus 121 --~~~~~fD~i~~~~~~~~~----------------------------------~~~l~~~~~~L~~gG~l~~~~~~~~- 163 (205)
T 3grz_A 121 --DVDGKFDLIVANILAEIL----------------------------------LDLIPQLDSHLNEDGQVIFSGIDYL- 163 (205)
T ss_dssp --TCCSCEEEEEEESCHHHH----------------------------------HHHGGGSGGGEEEEEEEEEEEEEGG-
T ss_pred --cCCCCceEEEECCcHHHH----------------------------------HHHHHHHHHhcCCCCEEEEEecCcc-
Confidence 456899999999877764 2668888899999999999765433
Q ss_pred CCcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEE
Q 037735 199 GIPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEK 257 (329)
Q Consensus 199 ~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~ 257 (329)
+.+++...+++.| |++.....
T Consensus 164 -------------------------------------~~~~~~~~~~~~G-f~~~~~~~ 184 (205)
T 3grz_A 164 -------------------------------------QLPKIEQALAENS-FQIDLKMR 184 (205)
T ss_dssp -------------------------------------GHHHHHHHHHHTT-EEEEEEEE
T ss_pred -------------------------------------cHHHHHHHHHHcC-CceEEeec
Confidence 3567778888774 88877654
No 105
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.73 E-value=7.6e-08 Score=91.62 Aligned_cols=150 Identities=15% Similarity=0.213 Sum_probs=96.0
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeeccccccccccC
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSSLF 121 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~lf 121 (329)
+..+|+|+|||+|..+..+.+ + .|..+++.-|+ ...... .+..+ .--| +.++|++ -+
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~--------~-------~p~~~~~~~D~-~~~~~~-a~~~~--~v~~---~~~d~~~-~~ 244 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICE--------T-------FPKLKCIVFDR-PQVVEN-LSGSN--NLTY---VGGDMFT-SI 244 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHH--------H-------CTTCEEEEEEC-HHHHTT-CCCBT--TEEE---EECCTTT-CC
T ss_pred cCceEEEeCCCccHHHHHHHH--------H-------CCCCeEEEeeC-HHHHhh-cccCC--CcEE---EeccccC-CC
Confidence 457999999999999888875 3 34578999999 444332 22222 1223 3457876 55
Q ss_pred CCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhcc---CceEEEEecccCC
Q 037735 122 PKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVP---GGLAALVMFSVPD 198 (329)
Q Consensus 122 p~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~p---GG~l~~~~~g~~~ 198 (329)
|+ +|+++++.++|.+++. +...+|+..++.|+| ||++++.-+..++
T Consensus 245 p~--~D~v~~~~~lh~~~d~-----------------------------~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~ 293 (352)
T 1fp2_A 245 PN--ADAVLLKYILHNWTDK-----------------------------DCLRILKKCKEAVTNDGKRGKVTIIDMVIDK 293 (352)
T ss_dssp CC--CSEEEEESCGGGSCHH-----------------------------HHHHHHHHHHHHHSGGGCCCEEEEEECEECT
T ss_pred CC--ccEEEeehhhccCCHH-----------------------------HHHHHHHHHHHhCCCCCCCcEEEEEEeecCC
Confidence 63 9999999999954321 234789999999999 9999998776543
Q ss_pred CCcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEE
Q 037735 199 GIPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEK 257 (329)
Q Consensus 199 ~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~ 257 (329)
.... ..+... ..+.++.... .. -..++.+|+.+++++.| |++.++..
T Consensus 294 ~~~~------~~~~~~-~~~~d~~~~~-~~---g~~~t~~e~~~ll~~aG-f~~~~~~~ 340 (352)
T 1fp2_A 294 KKDE------NQVTQI-KLLMDVNMAC-LN---GKERNEEEWKKLFIEAG-FQHYKISP 340 (352)
T ss_dssp TTSC------HHHHHH-HHHHHHHGGG-GT---CCCEEHHHHHHHHHHTT-CCEEEEEE
T ss_pred CCCc------cchhhh-HhhccHHHHh-cc---CCCCCHHHHHHHHHHCC-CCeeEEEe
Confidence 2210 000011 1122221100 00 13368999999999995 98877654
No 106
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.72 E-value=2.1e-08 Score=89.75 Aligned_cols=109 Identities=16% Similarity=0.199 Sum_probs=75.5
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC--Ccceeeecccccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ--SRSYYAAGVPGSFYS 118 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~--~~~~f~~gvpgsFy~ 118 (329)
.+..+|||+|||+|.++..+.. . .+ .+|+..|+..++....-+.... .+--+..| ++.+
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~--------~-------~~-~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~---d~~~ 119 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQE--------A-------PI-DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKG---LWED 119 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHT--------S-------CE-EEEEEEECCHHHHHHHHHHGGGCSSEEEEEES---CHHH
T ss_pred CCCCeEEEEeccCCHHHHHHHh--------c-------CC-CeEEEEcCCHHHHHHHHHHHHhcCCCeEEEec---CHHH
Confidence 3457999999999999888742 1 22 3799999998877665444321 12234443 5544
Q ss_pred c--cCCCCceeEEEe-ccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecc
Q 037735 119 S--LFPKSSLHFVHS-SYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFS 195 (329)
Q Consensus 119 ~--lfp~~s~dl~~S-s~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g 195 (329)
. .+|++++|+|++ .+++ ...... ..++..+|+..++.|+|||+|++..+.
T Consensus 120 ~~~~~~~~~fD~V~~d~~~~-~~~~~~--------------------------~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 120 VAPTLPDGHFDGILYDTYPL-SEETWH--------------------------THQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp HGGGSCTTCEEEEEECCCCC-BGGGTT--------------------------THHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred hhcccCCCceEEEEECCccc-chhhhh--------------------------hhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 4 578899999999 7766 222222 125567899999999999999987544
No 107
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.71 E-value=3.4e-08 Score=89.86 Aligned_cols=132 Identities=11% Similarity=0.026 Sum_probs=80.7
Q ss_pred chHHHhHHHHHHHHHhHhhHHHHHhhcccCCCCCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecC
Q 037735 9 SYASNSAYQSIQVYILRYDPRTAVTDLGTNAVPNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFND 88 (329)
Q Consensus 9 sY~~nS~~Q~~~~~~~~~~l~~ai~~i~~~~~~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nD 88 (329)
.|+.....|.+.+..++..|+ .+. ..+..+|||+|||+|..|..+.+.+ .|.-+|+..|
T Consensus 50 ~yr~w~~~~skla~~ll~~l~----~~~---l~~g~~VLDlG~GtG~~t~~la~~v--------------~~~G~V~avD 108 (232)
T 3id6_C 50 EYREWNAFRSKLAGAILKGLK----TNP---IRKGTKVLYLGAASGTTISHVSDII--------------ELNGKAYGVE 108 (232)
T ss_dssp EEEECCTTTCHHHHHHHTTCS----CCS---CCTTCEEEEETCTTSHHHHHHHHHH--------------TTTSEEEEEE
T ss_pred chhhhchHHHHHHHHHHhhhh----hcC---CCCCCEEEEEeecCCHHHHHHHHHh--------------CCCCEEEEEE
Confidence 377777788888877665553 111 2335899999999999998887533 3446899999
Q ss_pred CCcchHHhhhhcCC-CCcceeeeccccccccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHH
Q 037735 89 HSDNDFNTLFKSLP-QSRSYYAAGVPGSFYSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQ 167 (329)
Q Consensus 89 Lp~ndfn~lf~~l~-~~~~~f~~gvpgsFy~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q 167 (329)
+...+...+.+... ...-.++.+............+++|+++|..+. |
T Consensus 109 ~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~a~------~------------------------- 157 (232)
T 3id6_C 109 FSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDIAQ------P------------------------- 157 (232)
T ss_dssp CCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEECCCC------T-------------------------
T ss_pred CcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEecCCC------h-------------------------
Confidence 98876433322110 112234554322211111224689999998764 2
Q ss_pred HhhcHHHHHH-HHHHHhccCceEEEEecc
Q 037735 168 FNNDFQTFLN-TRAQELVPGGLAALVMFS 195 (329)
Q Consensus 168 ~~~D~~~FL~-~ra~eL~pGG~l~~~~~g 195 (329)
|-...|. ...+-|+|||+|++++-.
T Consensus 158 ---~~~~il~~~~~~~LkpGG~lvisik~ 183 (232)
T 3id6_C 158 ---DQTDIAIYNAKFFLKVNGDMLLVIKA 183 (232)
T ss_dssp ---THHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred ---hHHHHHHHHHHHhCCCCeEEEEEEcc
Confidence 1123343 444489999999999643
No 108
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=98.70 E-value=3.1e-08 Score=83.84 Aligned_cols=102 Identities=12% Similarity=0.062 Sum_probs=72.9
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC---CCcceeeeccccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP---QSRSYYAAGVPGSFY 117 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~---~~~~~f~~gvpgsFy 117 (329)
.+..+|+|+|||+|..+..+.. . .|..+++..|+........-+.+. -..++++.+ +..
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~--------~-------~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~---d~~ 85 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLR--------S-------TPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQ---GAP 85 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHT--------T-------SSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEEC---CTT
T ss_pred cCCCeEEEeCCCCCHHHHHHHH--------H-------CCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEec---chH
Confidence 3457999999999999988864 2 244689999998777666544321 111334443 443
Q ss_pred cccCCC--CceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecc
Q 037735 118 SSLFPK--SSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFS 195 (329)
Q Consensus 118 ~~lfp~--~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g 195 (329)
+ .+|. +++|+++++.++|| + .+|+...+.|+|||++++..+.
T Consensus 86 ~-~~~~~~~~~D~i~~~~~~~~----~-------------------------------~~l~~~~~~L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 86 R-AFDDVPDNPDVIFIGGGLTA----P-------------------------------GVFAAAWKRLPVGGRLVANAVT 129 (178)
T ss_dssp G-GGGGCCSCCSEEEECC-TTC----T-------------------------------THHHHHHHTCCTTCEEEEEECS
T ss_pred h-hhhccCCCCCEEEECCcccH----H-------------------------------HHHHHHHHhcCCCCEEEEEeec
Confidence 3 3444 89999999999988 3 5689999999999999998754
Q ss_pred c
Q 037735 196 V 196 (329)
Q Consensus 196 ~ 196 (329)
.
T Consensus 130 ~ 130 (178)
T 3hm2_A 130 V 130 (178)
T ss_dssp H
T ss_pred c
Confidence 3
No 109
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.69 E-value=2.4e-08 Score=83.38 Aligned_cols=111 Identities=16% Similarity=0.147 Sum_probs=74.2
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeecccccccccc-
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSSL- 120 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~l- 120 (329)
+..+|+|+|||+|..+..+.+.. .|..+++..|+.. +.. ++ +.-+..+ ++.+-.
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~--------------~~~~~v~~~D~~~-~~~-----~~--~~~~~~~---d~~~~~~ 76 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQI--------------GGKGRIIACDLLP-MDP-----IV--GVDFLQG---DFRDELV 76 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHH--------------CTTCEEEEEESSC-CCC-----CT--TEEEEES---CTTSHHH
T ss_pred CCCeEEEeCCCCCHHHHHHHHHh--------------CCCCeEEEEECcc-ccc-----cC--cEEEEEc---ccccchh
Confidence 45699999999999999887522 2335889999865 321 11 2223333 443322
Q ss_pred -------CCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEe
Q 037735 121 -------FPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVM 193 (329)
Q Consensus 121 -------fp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~ 193 (329)
++++++|+|+++..+||...... +..+ .......+|+...+-|+|||.++++.
T Consensus 77 ~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~---------------~~~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (180)
T 1ej0_A 77 MKALLERVGDSKVQVVMSDMAPNMSGTPAV---------------DIPR-----AMYLVELALEMCRDVLAPGGSFVVKV 136 (180)
T ss_dssp HHHHHHHHTTCCEEEEEECCCCCCCSCHHH---------------HHHH-----HHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhhhccCCCCceeEEEECCCccccCCCcc---------------chHH-----HHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 77889999999999999653210 0000 01123688999999999999999988
Q ss_pred cccC
Q 037735 194 FSVP 197 (329)
Q Consensus 194 ~g~~ 197 (329)
+...
T Consensus 137 ~~~~ 140 (180)
T 1ej0_A 137 FQGE 140 (180)
T ss_dssp ESST
T ss_pred ecCC
Confidence 7544
No 110
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.66 E-value=3.4e-07 Score=77.95 Aligned_cols=118 Identities=18% Similarity=0.109 Sum_probs=78.5
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeecccccccccc-
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSSL- 120 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~l- 120 (329)
+-.+|+|+|||+.. .-+-...++..+++... .+++...|. .+-.
T Consensus 12 ~g~~vL~~~~g~v~--vD~s~~ml~~a~~~~~~------~~~~~~~d~---------------------------~~~~~ 56 (176)
T 2ld4_A 12 AGQFVAVVWDKSSP--VEALKGLVDKLQALTGN------EGRVSVENI---------------------------KQLLQ 56 (176)
T ss_dssp TTSEEEEEECTTSC--HHHHHHHHHHHHHHTTT------TSEEEEEEG---------------------------GGGGG
T ss_pred CCCEEEEecCCcee--eeCCHHHHHHHHHhccc------CcEEEEech---------------------------hcCcc
Confidence 45789999999753 44445555555554211 133333332 1111
Q ss_pred --CCCCceeEEEeccceecc-cCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccC
Q 037735 121 --FPKSSLHFVHSSYTLHWL-SKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVP 197 (329)
Q Consensus 121 --fp~~s~dl~~Ss~alhWL-s~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~ 197 (329)
+|++++|+|+|+.++||+ .+. ..+|+..++.|+|||++++......
T Consensus 57 ~~~~~~~fD~V~~~~~l~~~~~~~-------------------------------~~~l~~~~r~LkpgG~l~~~~~~~~ 105 (176)
T 2ld4_A 57 SAHKESSFDIILSGLVPGSTTLHS-------------------------------AEILAEIARILRPGGCLFLKEPVET 105 (176)
T ss_dssp GCCCSSCEEEEEECCSTTCCCCCC-------------------------------HHHHHHHHHHEEEEEEEEEEEEEES
T ss_pred ccCCCCCEeEEEECChhhhcccCH-------------------------------HHHHHHHHHHCCCCEEEEEEccccc
Confidence 378899999999999998 433 3789999999999999999643211
Q ss_pred CCCcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEE
Q 037735 198 DGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEK 257 (329)
Q Consensus 198 ~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~ 257 (329)
... .. .|.++.+++.+.+++.| | +. ++.
T Consensus 106 ~~~-----------------------~~------~~~~~~~~~~~~l~~aG-f-i~-~~~ 133 (176)
T 2ld4_A 106 AVD-----------------------NN------SKVKTASKLCSALTLSG-L-VE-VKE 133 (176)
T ss_dssp SSC-----------------------SS------SSSCCHHHHHHHHHHTT-C-EE-EEE
T ss_pred ccc-----------------------cc------cccCCHHHHHHHHHHCC-C-cE-eec
Confidence 100 01 56789999999999985 8 66 443
No 111
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.65 E-value=8.9e-08 Score=85.92 Aligned_cols=118 Identities=15% Similarity=0.227 Sum_probs=78.1
Q ss_pred HhhHHHHHhhcccCCCCCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC-
Q 037735 25 RYDPRTAVTDLGTNAVPNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ- 103 (329)
Q Consensus 25 ~~~l~~ai~~i~~~~~~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~- 103 (329)
..++.+.+.... ..+..+|+|+|||+|..+..+.+ . ..+++..|+...+....-+....
T Consensus 27 ~~~~~~~~~~~~---~~~~~~vLDlGcG~G~~~~~l~~--------~---------~~~v~gvD~s~~~l~~a~~~~~~~ 86 (252)
T 1wzn_A 27 IDFVEEIFKEDA---KREVRRVLDLACGTGIPTLELAE--------R---------GYEVVGLDLHEEMLRVARRKAKER 86 (252)
T ss_dssp HHHHHHHHHHTC---SSCCCEEEEETCTTCHHHHHHHH--------T---------TCEEEEEESCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhc---ccCCCEEEEeCCCCCHHHHHHHH--------C---------CCeEEEEECCHHHHHHHHHHHHhc
Confidence 444454444321 23457999999999999988864 1 14799999987776665443321
Q ss_pred -CcceeeeccccccccccCCCCceeEEEecc-ceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHH
Q 037735 104 -SRSYYAAGVPGSFYSSLFPKSSLHFVHSSY-TLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQ 181 (329)
Q Consensus 104 -~~~~f~~gvpgsFy~~lfp~~s~dl~~Ss~-alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~ 181 (329)
.+..|..+ ++.+ +.+++++|+|++.. ++++++ ..|...+|+..++
T Consensus 87 ~~~v~~~~~---d~~~-~~~~~~fD~v~~~~~~~~~~~-----------------------------~~~~~~~l~~~~~ 133 (252)
T 1wzn_A 87 NLKIEFLQG---DVLE-IAFKNEFDAVTMFFSTIMYFD-----------------------------EEDLRKLFSKVAE 133 (252)
T ss_dssp TCCCEEEES---CGGG-CCCCSCEEEEEECSSGGGGSC-----------------------------HHHHHHHHHHHHH
T ss_pred CCceEEEEC---Chhh-cccCCCccEEEEcCCchhcCC-----------------------------HHHHHHHHHHHHH
Confidence 12234443 5644 33347899999874 455542 1256788999999
Q ss_pred HhccCceEEEEecc
Q 037735 182 ELVPGGLAALVMFS 195 (329)
Q Consensus 182 eL~pGG~l~~~~~g 195 (329)
.|+|||.+++.+..
T Consensus 134 ~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 134 ALKPGGVFITDFPC 147 (252)
T ss_dssp HEEEEEEEEEEEEC
T ss_pred HcCCCeEEEEeccc
Confidence 99999999988754
No 112
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.62 E-value=7.6e-08 Score=83.39 Aligned_cols=111 Identities=14% Similarity=0.190 Sum_probs=70.4
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeecccccccccc-
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSSL- 120 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~l- 120 (329)
+..+|+|+|||+|..|..+.+ ++. .+..+|+..|+.... .++ .-.|..+ ++.+..
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~--------~~~-----~~~~~v~gvD~s~~~------~~~--~v~~~~~---d~~~~~~ 77 (201)
T 2plw_A 22 KNKIILDIGCYPGSWCQVILE--------RTK-----NYKNKIIGIDKKIMD------PIP--NVYFIQG---EIGKDNM 77 (201)
T ss_dssp TTEEEEEESCTTCHHHHHHHH--------HTT-----TSCEEEEEEESSCCC------CCT--TCEEEEC---CTTTTSS
T ss_pred CCCEEEEeCCCCCHHHHHHHH--------HcC-----CCCceEEEEeCCccC------CCC--CceEEEc---cccchhh
Confidence 457999999999999998875 221 013689999987521 111 1123322 333222
Q ss_pred ------------------------CCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHH
Q 037735 121 ------------------------FPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFL 176 (329)
Q Consensus 121 ------------------------fp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL 176 (329)
+|++++|+|+|..++||... + ....+. ..+....+|
T Consensus 78 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~-~-----------------~~d~~~--~~~~~~~~l 137 (201)
T 2plw_A 78 NNIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGN-K-----------------IDDHLN--SCELTLSIT 137 (201)
T ss_dssp CCC-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSC-H-----------------HHHHHH--HHHHHHHHH
T ss_pred hhhccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCC-c-----------------ccCHHH--HHHHHHHHH
Confidence 57789999999999999421 0 000000 011234578
Q ss_pred HHHHHHhccCceEEEEeccc
Q 037735 177 NTRAQELVPGGLAALVMFSV 196 (329)
Q Consensus 177 ~~ra~eL~pGG~l~~~~~g~ 196 (329)
+...+-|+|||.|++.++..
T Consensus 138 ~~~~~~LkpgG~lv~~~~~~ 157 (201)
T 2plw_A 138 HFMEQYINIGGTYIVKMYLG 157 (201)
T ss_dssp HHHHHHEEEEEEEEEEEECS
T ss_pred HHHHHHccCCCEEEEEEeCC
Confidence 88899999999999987653
No 113
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.61 E-value=1.6e-07 Score=82.67 Aligned_cols=113 Identities=11% Similarity=0.081 Sum_probs=75.9
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC---CCcceeeecccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP---QSRSYYAAGVPGSFYS 118 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~---~~~~~f~~gvpgsFy~ 118 (329)
+..+|+|+|||+|..+..+.. . .|..+++..|+.......+-+.+. -.+-.|+.+...++ .
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~--------~-------~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~-~ 104 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAK--------Q-------NPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDL-T 104 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHH--------H-------CTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCG-G
T ss_pred CCCeEEEEccCcCHHHHHHHH--------H-------CCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHH-H
Confidence 356899999999999988865 2 345689999998777665544331 11233555432221 2
Q ss_pred ccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEe
Q 037735 119 SLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVM 193 (329)
Q Consensus 119 ~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~ 193 (329)
..+|++++|+|+++...+|....... . +-+...||+..++.|+|||.+++.+
T Consensus 105 ~~~~~~~~D~i~~~~~~~~~~~~~~~----~-------------------~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 105 DYFEDGEIDRLYLNFSDPWPKKRHEK----R-------------------RLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp GTSCTTCCSEEEEESCCCCCSGGGGG----G-------------------STTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred hhcCCCCCCEEEEECCCCccccchhh----h-------------------ccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 34788999999999877774321100 0 0023478999999999999999976
No 114
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.60 E-value=2e-07 Score=82.91 Aligned_cols=120 Identities=11% Similarity=0.051 Sum_probs=84.4
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeecccccccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSSL 120 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~l 120 (329)
.+..+|+|+|||+|..+..+.+ . ..+|+..|+........-+..+ +..|..+ ++.+.+
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~--------~---------~~~v~~vD~s~~~~~~a~~~~~--~~~~~~~---d~~~~~ 104 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGP--------Q---------AARWAAYDFSPELLKLARANAP--HADVYEW---NGKGEL 104 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGG--------G---------SSEEEEEESCHHHHHHHHHHCT--TSEEEEC---CSCSSC
T ss_pred CCCCeEEEeCCCCCHHHHHHHH--------c---------CCEEEEEECCHHHHHHHHHhCC--CceEEEc---chhhcc
Confidence 3457999999999998888764 1 2589999998877666555533 2334444 454433
Q ss_pred -CC-CCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCC
Q 037735 121 -FP-KSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPD 198 (329)
Q Consensus 121 -fp-~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~ 198 (329)
++ ++++|+|+|+ .+.+ .+|+..++.|+|||+|+ .+
T Consensus 105 ~~~~~~~fD~v~~~------~~~~-------------------------------~~l~~~~~~LkpgG~l~--~~---- 141 (226)
T 3m33_A 105 PAGLGAPFGLIVSR------RGPT-------------------------------SVILRLPELAAPDAHFL--YV---- 141 (226)
T ss_dssp CTTCCCCEEEEEEE------SCCS-------------------------------GGGGGHHHHEEEEEEEE--EE----
T ss_pred CCcCCCCEEEEEeC------CCHH-------------------------------HHHHHHHHHcCCCcEEE--Ee----
Confidence 66 8899999997 2222 56889999999999999 10
Q ss_pred CCcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEee
Q 037735 199 GIPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKMT 259 (329)
Q Consensus 199 ~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~~ 259 (329)
....+.+++...++.. +|++..++...
T Consensus 142 ---------------------------------~~~~~~~~~~~~l~~~-Gf~~~~~~~~~ 168 (226)
T 3m33_A 142 ---------------------------------GPRLNVPEVPERLAAV-GWDIVAEDHVS 168 (226)
T ss_dssp ---------------------------------ESSSCCTHHHHHHHHT-TCEEEEEEEEE
T ss_pred ---------------------------------CCcCCHHHHHHHHHHC-CCeEEEEEeee
Confidence 1123567788888888 48888777543
No 115
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=98.59 E-value=5.4e-08 Score=84.06 Aligned_cols=108 Identities=13% Similarity=0.110 Sum_probs=75.7
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC---CCcceeeecccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP---QSRSYYAAGVPGSFYS 118 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~---~~~~~f~~gvpgsFy~ 118 (329)
+..+|+|+|||+|..+..+++ .+..+|+..|+.......+-+++. -.+--|..+ ++.+
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~----------------~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~---d~~~ 104 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALS----------------RGAASVLFVESDQRSAAVIARNIEALGLSGATLRRG---AVAA 104 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHH----------------TTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEES---CHHH
T ss_pred CCCEEEEeCCCcCHHHHHHHH----------------CCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEc---cHHH
Confidence 457899999999999987754 122479999998777666544331 112234554 4543
Q ss_pred cc--CCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHH--HhccCceEEEEec
Q 037735 119 SL--FPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQ--ELVPGGLAALVMF 194 (329)
Q Consensus 119 ~l--fp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~--eL~pGG~l~~~~~ 194 (329)
-+ ++++++|+|+++..+||.. .|+..+|....+ .|+|||++++...
T Consensus 105 ~~~~~~~~~fD~i~~~~p~~~~~------------------------------~~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 105 VVAAGTTSPVDLVLADPPYNVDS------------------------------ADVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp HHHHCCSSCCSEEEECCCTTSCH------------------------------HHHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred HHhhccCCCccEEEECCCCCcch------------------------------hhHHHHHHHHHhcCccCCCeEEEEEec
Confidence 33 4678999999987777631 245577888888 9999999999887
Q ss_pred ccCC
Q 037735 195 SVPD 198 (329)
Q Consensus 195 g~~~ 198 (329)
.+..
T Consensus 155 ~~~~ 158 (189)
T 3p9n_A 155 TTCA 158 (189)
T ss_dssp TTSC
T ss_pred CCCC
Confidence 6554
No 116
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.58 E-value=9.7e-08 Score=84.69 Aligned_cols=111 Identities=10% Similarity=0.093 Sum_probs=75.5
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC---CCcceeeecccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP---QSRSYYAAGVPGSFYS 118 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~---~~~~~f~~gvpgsFy~ 118 (329)
+..+|+|+|||+|..+..+.. . .|..+++..|+........-+.+. ...-.|+.+ ++.+
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~--------~-------~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~---d~~~ 99 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAK--------Q-------NPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNI---DADT 99 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHH--------H-------CTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECC---CGGG
T ss_pred CCceEEEEecCCCHHHHHHHH--------H-------CCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeC---CHHH
Confidence 346899999999999998864 2 355789999999877666544321 111234444 4432
Q ss_pred --ccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEe
Q 037735 119 --SLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVM 193 (329)
Q Consensus 119 --~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~ 193 (329)
..+|++++|.+++++...|..+... +.++ ....||+..++.|+|||.+++.+
T Consensus 100 l~~~~~~~~~d~v~~~~~~p~~~~~~~----~~rl-------------------~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 100 LTDVFEPGEVKRVYLNFSDPWPKKRHE----KRRL-------------------TYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp HHHHCCTTSCCEEEEESCCCCCSGGGG----GGST-------------------TSHHHHHHHHHHHTTSCEEEEEE
T ss_pred HHhhcCcCCcCEEEEECCCCCcCcccc----cccc-------------------CcHHHHHHHHHHcCCCCEEEEEe
Confidence 3478999999998877777432110 0000 12478999999999999999987
No 117
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.57 E-value=3.3e-07 Score=82.33 Aligned_cols=155 Identities=14% Similarity=0.069 Sum_probs=84.8
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCC-cchHHhh---hhcCC---CCcceeeeccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHS-DNDFNTL---FKSLP---QSRSYYAAGVP 113 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp-~ndfn~l---f~~l~---~~~~~f~~gvp 113 (329)
....+|||+|||+|.++..+.. + .|..+|+..|+. .++.... -+... .....|..+
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~--------~-------~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~-- 85 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAI--------N-------DQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIA-- 85 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHH--------T-------CTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECC--
T ss_pred CCCCEEEEEeccCcHHHHHHHH--------h-------CCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEc--
Confidence 3457999999999999988863 2 345789999998 5553332 22211 111234444
Q ss_pred cccccccCCC---CceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEE
Q 037735 114 GSFYSSLFPK---SSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAA 190 (329)
Q Consensus 114 gsFy~~lfp~---~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~ 190 (329)
+. +.+ |. +.++.+++++...++ ...-..|...+|+..++.|+|||+|+
T Consensus 86 -d~-~~l-~~~~~d~v~~i~~~~~~~~~--------------------------~~~~~~~~~~~l~~~~r~LkpGG~l~ 136 (225)
T 3p2e_A 86 -AA-ESL-PFELKNIADSISILFPWGTL--------------------------LEYVIKPNRDILSNVADLAKKEAHFE 136 (225)
T ss_dssp -BT-TBC-CGGGTTCEEEEEEESCCHHH--------------------------HHHHHTTCHHHHHHHHTTEEEEEEEE
T ss_pred -CH-HHh-hhhccCeEEEEEEeCCCcHH--------------------------hhhhhcchHHHHHHHHHhcCCCcEEE
Confidence 33 222 33 456666555432221 00111233578999999999999999
Q ss_pred EEecccCCCCcccCCcccchHHHHHHHHHHHHhcCCcCCCc-ccCCCHHHHHHHHHhCCceEEeEEEEeecC
Q 037735 191 LVMFSVPDGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEK-MYNPTPKELEGIIQRNGNFTIERMEKMTNP 261 (329)
Q Consensus 191 ~~~~g~~~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~-~y~ps~eE~~~~i~~~g~f~i~~~e~~~~~ 261 (329)
+.+...++.... ...++ +. ..-. -|++ .+|+.+.+++. +|++...+.+..+
T Consensus 137 i~~~~~~~~~~~------------~~~~~-----~~-~~~~~~~~~-~~el~~~l~~a-Gf~v~~~~~~~~~ 188 (225)
T 3p2e_A 137 FVTTYSDSYEEA------------EIKKR-----GL-PLLSKAYFL-SEQYKAELSNS-GFRIDDVKELDNE 188 (225)
T ss_dssp EEECCCC--------------------------------CCHHHHH-SHHHHHHHHHH-TCEEEEEEEECHH
T ss_pred EEEeccccchhc------------hhhhc-----CC-CCCChhhcc-hHHHHHHHHHc-CCCeeeeeecCHH
Confidence 954322221110 00001 10 0000 1212 24689999888 5999999988543
No 118
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.57 E-value=3.3e-07 Score=83.17 Aligned_cols=100 Identities=21% Similarity=0.232 Sum_probs=72.9
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeecccccccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSSL 120 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~l 120 (329)
.+..+|+|+|||+|..+..+.+ . .|..+++..|+..+.....-+..+. ..|..+ ++....
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~--------~-------~~~~~v~~vD~s~~~~~~a~~~~~~--~~~~~~---d~~~~~ 143 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFAD--------A-------LPEITTFGLDVSKVAIKAAAKRYPQ--VTFCVA---SSHRLP 143 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHH--------T-------CTTSEEEEEESCHHHHHHHHHHCTT--SEEEEC---CTTSCS
T ss_pred CCCCEEEEECCCCCHHHHHHHH--------h-------CCCCeEEEEeCCHHHHHHHHHhCCC--cEEEEc---chhhCC
Confidence 3457999999999999998875 1 1235899999988776665544432 234443 454444
Q ss_pred CCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCC
Q 037735 121 FPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPD 198 (329)
Q Consensus 121 fp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~ 198 (329)
++++++|+|+|+.+ +. +|+...+.|+|||++++.+++.++
T Consensus 144 ~~~~~fD~v~~~~~-------~~-------------------------------~l~~~~~~L~pgG~l~~~~~~~~~ 183 (269)
T 1p91_A 144 FSDTSMDAIIRIYA-------PC-------------------------------KAEELARVVKPGGWVITATPGPRH 183 (269)
T ss_dssp BCTTCEEEEEEESC-------CC-------------------------------CHHHHHHHEEEEEEEEEEEECTTT
T ss_pred CCCCceeEEEEeCC-------hh-------------------------------hHHHHHHhcCCCcEEEEEEcCHHH
Confidence 78899999998654 32 278889999999999999988754
No 119
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.57 E-value=2e-07 Score=80.55 Aligned_cols=115 Identities=19% Similarity=0.209 Sum_probs=74.9
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC----Ccceeeeccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ----SRSYYAAGVPGSFY 117 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~----~~~~f~~gvpgsFy 117 (329)
+..+|+|+|||+|..+..+.+.+ .|..+++..|+........-+.+.. .+--++.+ ++.
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~--------------~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~---d~~ 84 (197)
T 3eey_A 22 EGDTVVDATCGNGNDTAFLASLV--------------GENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKD---GHQ 84 (197)
T ss_dssp TTCEEEESCCTTSHHHHHHHHHH--------------CTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECS---CGG
T ss_pred CCCEEEEcCCCCCHHHHHHHHHh--------------CCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEEC---CHH
Confidence 34699999999999999887632 2335899999987776665444321 12234444 453
Q ss_pred ccc-CCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecc
Q 037735 118 SSL-FPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFS 195 (329)
Q Consensus 118 ~~l-fp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g 195 (329)
+-. ++++++|+++++..+ +|..+ ..+. .. ..|...+|+...+.|+|||++++..+.
T Consensus 85 ~~~~~~~~~fD~v~~~~~~-----~~~~~---~~~~---~~-----------~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 85 NMDKYIDCPVKAVMFNLGY-----LPSGD---HSIS---TR-----------PETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp GGGGTCCSCEEEEEEEESB-----CTTSC---TTCB---CC-----------HHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred HHhhhccCCceEEEEcCCc-----ccCcc---cccc---cC-----------cccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 333 567899999998766 22110 0000 01 114456899999999999999998764
No 120
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.56 E-value=1.1e-07 Score=91.00 Aligned_cols=103 Identities=19% Similarity=0.116 Sum_probs=73.2
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC---C-Ccceeeeccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP---Q-SRSYYAAGVPGSFY 117 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~---~-~~~~f~~gvpgsFy 117 (329)
+..+|||+|||+|..+..+.+ .+..+|+..|+. .+....-+.+. - .+--|+.| ++.
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~----------------~g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~---d~~ 125 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAK----------------AGARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKG---KVE 125 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHH----------------TTCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEES---CTT
T ss_pred CCCEEEEEeccchHHHHHHHH----------------CCCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEEC---cHH
Confidence 357899999999999888874 122489999998 45444433221 1 11234444 564
Q ss_pred cccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEE
Q 037735 118 SSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALV 192 (329)
Q Consensus 118 ~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~ 192 (329)
+-.+|++++|+|+|....+++...+ ++..+|..+.+.|+|||+|++.
T Consensus 126 ~~~~~~~~fD~Iis~~~~~~l~~~~----------------------------~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 126 EVELPVEKVDIIISEWMGYCLFYES----------------------------MLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp TCCCSSSCEEEEEECCCBBTBTBTC----------------------------CHHHHHHHHHHHEEEEEEEESC
T ss_pred HccCCCCceEEEEEccccccccCch----------------------------hHHHHHHHHHHhCCCCCEEccc
Confidence 5458889999999988777765433 5668899999999999999743
No 121
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.55 E-value=3.4e-08 Score=84.18 Aligned_cols=105 Identities=10% Similarity=0.088 Sum_probs=75.3
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC---CCc--ceeeecccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP---QSR--SYYAAGVPGSF 116 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~---~~~--~~f~~gvpgsF 116 (329)
+..+|+|+|||+|..+..+.. . ..+++..|+........-+.+. ... ..+..+ ++
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~--------~---------~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~---d~ 111 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALAD--------E---------VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHS---DL 111 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGG--------G---------SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEEC---ST
T ss_pred CCCeEEEeCCCCCHHHHHHHH--------c---------CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEEC---ch
Confidence 457999999999999887763 1 2589999998766555443321 111 234433 55
Q ss_pred ccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEeccc
Q 037735 117 YSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSV 196 (329)
Q Consensus 117 y~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~ 196 (329)
.+ .++++++|+|+++..+||- ..++..+|+...+.|+|||.+++.....
T Consensus 112 ~~-~~~~~~~D~v~~~~~~~~~------------------------------~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 112 YE-NVKDRKYNKIITNPPIRAG------------------------------KEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp TT-TCTTSCEEEEEECCCSTTC------------------------------HHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred hc-ccccCCceEEEECCCcccc------------------------------hhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 44 5667899999998888871 1245688999999999999999998765
Q ss_pred C
Q 037735 197 P 197 (329)
Q Consensus 197 ~ 197 (329)
.
T Consensus 161 ~ 161 (194)
T 1dus_A 161 Q 161 (194)
T ss_dssp H
T ss_pred C
Confidence 3
No 122
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=98.55 E-value=8.2e-08 Score=83.75 Aligned_cols=103 Identities=10% Similarity=0.048 Sum_probs=71.7
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC---CCcceeeeccccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP---QSRSYYAAGVPGSFY 117 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~---~~~~~f~~gvpgsFy 117 (329)
.+..+|+|+|||+|..+..+.. . .|..+++..|........+-+.+. -.+--+.. +++.
T Consensus 39 ~~~~~vLDiG~G~G~~~~~la~--------~-------~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~---~d~~ 100 (204)
T 3e05_A 39 QDDLVMWDIGAGSASVSIEASN--------L-------MPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVE---AFAP 100 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHH--------H-------CTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEE---CCTT
T ss_pred CCCCEEEEECCCCCHHHHHHHH--------H-------CCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEe---CChh
Confidence 3457999999999999988875 2 234689999998776655543321 11122333 3554
Q ss_pred cccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecc
Q 037735 118 SSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFS 195 (329)
Q Consensus 118 ~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g 195 (329)
+.+.+.+++|++++..+++ +...+|+...+.|+|||++++....
T Consensus 101 ~~~~~~~~~D~i~~~~~~~----------------------------------~~~~~l~~~~~~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 101 EGLDDLPDPDRVFIGGSGG----------------------------------MLEEIIDAVDRRLKSEGVIVLNAVT 144 (204)
T ss_dssp TTCTTSCCCSEEEESCCTT----------------------------------CHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred hhhhcCCCCCEEEECCCCc----------------------------------CHHHHHHHHHHhcCCCeEEEEEecc
Confidence 4444447899999876554 2347899999999999999997644
No 123
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.54 E-value=2.5e-07 Score=84.36 Aligned_cols=122 Identities=14% Similarity=0.124 Sum_probs=83.6
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC--Ccceeeeccccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ--SRSYYAAGVPGSFYSS 119 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~--~~~~f~~gvpgsFy~~ 119 (329)
+..+|+|+|||+|..+..+.+ . .+ +|+..|+........-++... ..--+.. +++..
T Consensus 120 ~~~~VLDiGcG~G~l~~~la~--------~-------g~--~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~---~d~~~- 178 (254)
T 2nxc_A 120 PGDKVLDLGTGSGVLAIAAEK--------L-------GG--KALGVDIDPMVLPQAEANAKRNGVRPRFLE---GSLEA- 178 (254)
T ss_dssp TTCEEEEETCTTSHHHHHHHH--------T-------TC--EEEEEESCGGGHHHHHHHHHHTTCCCEEEE---SCHHH-
T ss_pred CCCEEEEecCCCcHHHHHHHH--------h-------CC--eEEEEECCHHHHHHHHHHHHHcCCcEEEEE---CChhh-
Confidence 357999999999998887653 1 22 799999987666555443221 1112333 34433
Q ss_pred cCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCCC
Q 037735 120 LFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPDG 199 (329)
Q Consensus 120 lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~~ 199 (329)
.+|++++|+++++...|++ ..++...++.|+|||+++++.+..
T Consensus 179 ~~~~~~fD~Vv~n~~~~~~----------------------------------~~~l~~~~~~LkpgG~lils~~~~--- 221 (254)
T 2nxc_A 179 ALPFGPFDLLVANLYAELH----------------------------------AALAPRYREALVPGGRALLTGILK--- 221 (254)
T ss_dssp HGGGCCEEEEEEECCHHHH----------------------------------HHHHHHHHHHEEEEEEEEEEEEEG---
T ss_pred cCcCCCCCEEEECCcHHHH----------------------------------HHHHHHHHHHcCCCCEEEEEeecc---
Confidence 3577899999997655542 367888999999999999975432
Q ss_pred CcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEE
Q 037735 200 IPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEK 257 (329)
Q Consensus 200 ~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~ 257 (329)
.+.+++.+.+++. +|++.+...
T Consensus 222 -----------------------------------~~~~~v~~~l~~~-Gf~~~~~~~ 243 (254)
T 2nxc_A 222 -----------------------------------DRAPLVREAMAGA-GFRPLEEAA 243 (254)
T ss_dssp -----------------------------------GGHHHHHHHHHHT-TCEEEEEEE
T ss_pred -----------------------------------CCHHHHHHHHHHC-CCEEEEEec
Confidence 2367788888887 488877654
No 124
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.53 E-value=3.7e-07 Score=89.33 Aligned_cols=128 Identities=14% Similarity=0.126 Sum_probs=84.0
Q ss_pred CCceEEEeeeCC------CCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeecccc
Q 037735 41 PNTFRIADFGCS------TGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPG 114 (329)
Q Consensus 41 ~~~~~IaDlGCs------tG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpg 114 (329)
.++.+|||+||| +|..|+.++... .|..+|+..|+..++. + ...+--|..|
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~--------------fP~a~V~GVDiSp~m~---~---~~~rI~fv~G--- 271 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSF--------------FPRGQIYGLDIMDKSH---V---DELRIRTIQG--- 271 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHH--------------CTTCEEEEEESSCCGG---G---CBTTEEEEEC---
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHh--------------CCCCEEEEEECCHHHh---h---cCCCcEEEEe---
Confidence 457899999999 888888877522 3457899999987762 1 1122345555
Q ss_pred ccccccCC------CCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCce
Q 037735 115 SFYSSLFP------KSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGL 188 (329)
Q Consensus 115 sFy~~lfp------~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~ 188 (329)
+..+.-|+ ++++|+|+|..+ ||.. |...+|+...+.|+|||+
T Consensus 272 Da~dlpf~~~l~~~d~sFDlVisdgs-H~~~-------------------------------d~~~aL~el~rvLKPGGv 319 (419)
T 3sso_A 272 DQNDAEFLDRIARRYGPFDIVIDDGS-HINA-------------------------------HVRTSFAALFPHVRPGGL 319 (419)
T ss_dssp CTTCHHHHHHHHHHHCCEEEEEECSC-CCHH-------------------------------HHHHHHHHHGGGEEEEEE
T ss_pred cccccchhhhhhcccCCccEEEECCc-ccch-------------------------------hHHHHHHHHHHhcCCCeE
Confidence 45333355 689999999865 5422 445789999999999999
Q ss_pred EEEEecccCCCCcc----c-CCcccchHHHHHHHHHHHHh
Q 037735 189 AALVMFSVPDGIPL----V-NNAAGSFYNTFGSCLVELTK 223 (329)
Q Consensus 189 l~~~~~g~~~~~~~----~-~~~~~~~~~~l~~a~~~l~~ 223 (329)
+++.-+-..-.... . ......+.+.++..+..+-.
T Consensus 320 lVi~Dl~tsy~p~f~G~~~~~~~~~tii~~lk~l~D~l~~ 359 (419)
T 3sso_A 320 YVIEDMWTAYWPGFGGQADPQECSGTSLGLLKSLIDAIQH 359 (419)
T ss_dssp EEEECGGGGGCTBTTCCSSTTCCTTSHHHHHHHHHHHHTG
T ss_pred EEEEecccccCcccCCCccCCcchhHHHHHHHHHHHHhcc
Confidence 99986642211000 0 01223467777777777743
No 125
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.52 E-value=2.4e-07 Score=89.47 Aligned_cols=105 Identities=14% Similarity=0.135 Sum_probs=74.1
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC----Ccceeeecccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ----SRSYYAAGVPGSF 116 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~----~~~~f~~gvpgsF 116 (329)
.+..+|||+|||+|..++.+.+ . .. .+|+..|+. ++...+-+.+.. .+-.++.| ++
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~--------~-------g~-~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~---d~ 121 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQ--------A-------GA-RKVYAVEAT-KMADHARALVKANNLDHIVEVIEG---SV 121 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHH--------T-------TC-SEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEES---CG
T ss_pred CCCCEEEEeccCcCHHHHHHHh--------c-------CC-CEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEEC---ch
Confidence 3457999999999999888764 1 11 389999998 766554433311 11234444 56
Q ss_pred ccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEec
Q 037735 117 YSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMF 194 (329)
Q Consensus 117 y~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~ 194 (329)
.+-.+| +++|+|+|....|++...+ ++..+|+.+.+-|+|||+|+++..
T Consensus 122 ~~~~~~-~~~D~Iv~~~~~~~l~~e~----------------------------~~~~~l~~~~~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 122 EDISLP-EKVDVIISEWMGYFLLRES----------------------------MFDSVISARDRWLKPTGVMYPSHA 170 (376)
T ss_dssp GGCCCS-SCEEEEEECCCBTTBTTTC----------------------------THHHHHHHHHHHEEEEEEEESSEE
T ss_pred hhcCcC-CcceEEEEcChhhcccchH----------------------------HHHHHHHHHHhhCCCCeEEEEecC
Confidence 444455 8999999988778775432 567899999999999999987543
No 126
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=98.51 E-value=2.3e-07 Score=79.34 Aligned_cols=112 Identities=12% Similarity=0.121 Sum_probs=69.4
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC---CCcceeeecccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP---QSRSYYAAGVPGSFYS 118 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~---~~~~~f~~gvpgsFy~ 118 (329)
+..+|+|+|||+|..|..+.+ . ..+|+..|+...+....-+.+. -.+-.|..+ ++..
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~----------------~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~---~~~~ 81 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAG----------------L-SKKVYAFDVQEQALGKTSQRLSDLGIENTELILD---GHEN 81 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHT----------------T-SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEES---CGGG
T ss_pred CCCEEEEEcCCCCHHHHHHHH----------------h-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC---cHHH
Confidence 457899999999999998874 1 2589999998877666544332 112234433 3422
Q ss_pred cc-CCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecc
Q 037735 119 SL-FPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFS 195 (329)
Q Consensus 119 ~l-fp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g 195 (329)
-. ++++++|+++++. +|+...... +. ....+...+|+...+.|+|||+|++..+.
T Consensus 82 l~~~~~~~fD~v~~~~--~~~~~~~~~---------------~~-----~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 82 LDHYVREPIRAAIFNL--GYLPSADKS---------------VI-----TKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp GGGTCCSCEEEEEEEE--C-------------------------------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred HHhhccCCcCEEEEeC--CCCCCcchh---------------cc-----cChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 11 5688999998763 554321100 00 00123456789999999999999998764
No 127
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.51 E-value=1.6e-07 Score=85.08 Aligned_cols=116 Identities=13% Similarity=0.022 Sum_probs=72.1
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC--------CCCc-ceeeec
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL--------PQSR-SYYAAG 111 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l--------~~~~-~~f~~g 111 (329)
.+..+|||+|||+|..+..+.. . .|...++..|+...+....-+.+ .... --|+.+
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~--------~-------~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~ 109 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSP--------L-------FPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRS 109 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGG--------G-------STTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEEC
T ss_pred CCCCeEEEEccCCcHHHHHHHH--------H-------CCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEEC
Confidence 3457899999999999988863 2 35578999999877655432111 1112 235554
Q ss_pred cccccccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEE
Q 037735 112 VPGSFYSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAAL 191 (329)
Q Consensus 112 vpgsFy~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~ 191 (329)
....+....||++++|.++..+.-.|..+... +.+ -....||+.-++.|+|||.|++
T Consensus 110 d~~~~l~~~~~~~~~D~v~~~~~dp~~k~~h~----krr-------------------~~~~~~l~~~~~~LkpGG~l~~ 166 (235)
T 3ckk_A 110 NAMKHLPNFFYKGQLTKMFFLFPDPHFKRTKH----KWR-------------------IISPTLLAEYAYVLRVGGLVYT 166 (235)
T ss_dssp CTTTCHHHHCCTTCEEEEEEESCC----------------------------------CCCHHHHHHHHHHEEEEEEEEE
T ss_pred cHHHhhhhhCCCcCeeEEEEeCCCchhhhhhh----hhh-------------------hhhHHHHHHHHHHCCCCCEEEE
Confidence 32222233478999999998877777432110 000 0113789999999999999999
Q ss_pred Eec
Q 037735 192 VMF 194 (329)
Q Consensus 192 ~~~ 194 (329)
.+.
T Consensus 167 ~td 169 (235)
T 3ckk_A 167 ITD 169 (235)
T ss_dssp EES
T ss_pred EeC
Confidence 873
No 128
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.49 E-value=1.9e-07 Score=90.66 Aligned_cols=106 Identities=20% Similarity=0.194 Sum_probs=78.5
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC--Ccceeeeccccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ--SRSYYAAGVPGSFYSS 119 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~--~~~~f~~gvpgsFy~~ 119 (329)
+..+|+|+|||+|..+..+.+ . ..+|+..|.........-+++.. ...-|+. +++.+-
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~--------~---------g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~---~D~~~~ 292 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLAR--------M---------GAEVVGVEDDLASVLSLQKGLEANALKAQALH---SDVDEA 292 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHH--------T---------TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEE---CSTTTT
T ss_pred CCCEEEEEeeeCCHHHHHHHH--------c---------CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEE---cchhhc
Confidence 457999999999999999874 1 14899999977666555444321 1123444 356565
Q ss_pred cCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEe
Q 037735 120 LFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVM 193 (329)
Q Consensus 120 lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~ 193 (329)
+.+++++|+|+|+..+||-..... .+...|++...+.|+|||.++++.
T Consensus 293 ~~~~~~fD~Ii~npp~~~~~~~~~--------------------------~~~~~~l~~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 293 LTEEARFDIIVTNPPFHVGGAVIL--------------------------DVAQAFVNVAAARLRPGGVFFLVS 340 (381)
T ss_dssp SCTTCCEEEEEECCCCCTTCSSCC--------------------------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccCCCeEEEEECCchhhcccccH--------------------------HHHHHHHHHHHHhcCcCcEEEEEE
Confidence 666789999999999999554431 256689999999999999999986
No 129
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.48 E-value=6.1e-07 Score=75.65 Aligned_cols=97 Identities=12% Similarity=0.077 Sum_probs=66.3
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC---CCcceeeeccccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP---QSRSYYAAGVPGSFY 117 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~---~~~~~f~~gvpgsFy 117 (329)
.+..+|+|+|||+|..+..+.. +..+++..|.........-+.+. -.+-.+.. +++.
T Consensus 34 ~~~~~vLdiG~G~G~~~~~l~~-----------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~---~d~~ 93 (183)
T 2yxd_A 34 NKDDVVVDVGCGSGGMTVEIAK-----------------RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIK---GRAE 93 (183)
T ss_dssp CTTCEEEEESCCCSHHHHHHHT-----------------TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEE---SCHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHh-----------------cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEE---CCcc
Confidence 3457999999999999988863 23589999998766655444331 11222333 3565
Q ss_pred cccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecc
Q 037735 118 SSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFS 195 (329)
Q Consensus 118 ~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g 195 (329)
+ .+|++++|+++++.. . ++..+|+...+. |||.+++....
T Consensus 94 ~-~~~~~~~D~i~~~~~-------~----------------------------~~~~~l~~~~~~--~gG~l~~~~~~ 133 (183)
T 2yxd_A 94 D-VLDKLEFNKAFIGGT-------K----------------------------NIEKIIEILDKK--KINHIVANTIV 133 (183)
T ss_dssp H-HGGGCCCSEEEECSC-------S----------------------------CHHHHHHHHHHT--TCCEEEEEESC
T ss_pred c-cccCCCCcEEEECCc-------c----------------------------cHHHHHHHHhhC--CCCEEEEEecc
Confidence 5 677789999999877 1 233566665555 99999998854
No 130
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.46 E-value=8.9e-08 Score=83.00 Aligned_cols=126 Identities=12% Similarity=0.036 Sum_probs=65.8
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCC--cceeeecccccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQS--RSYYAAGVPGSFYS 118 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~--~~~f~~gvpgsFy~ 118 (329)
.+..+|+|+|||+|..+..+.+ . .|..+++..|+........-+.+... +-.+.. +++.+
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~--------~-------~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~---~d~~~ 90 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIAL--------A-------CPGVSVTAVDLSMDALAVARRNAERFGAVVDWAA---ADGIE 90 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHH--------H-------CTTEEEEEEECC-------------------CCH---HHHHH
T ss_pred CCCCEEEEecCCHhHHHHHHHH--------h-------CCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEE---cchHh
Confidence 4568999999999999988875 2 23468999999776655544433221 112333 35644
Q ss_pred ccCCC-----CceeEEEeccceecccCCCCC-----CCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCce
Q 037735 119 SLFPK-----SSLHFVHSSYTLHWLSKVPKV-----DGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGL 188 (329)
Q Consensus 119 ~lfp~-----~s~dl~~Ss~alhWLs~~p~~-----~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~ 188 (329)
.+++ +++|+|+++-.+++....... .+.... .... .......+..|++...+.|+|||+
T Consensus 91 -~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~-~~~~---------~~~~~~~~~~~l~~~~~~LkpgG~ 159 (215)
T 4dzr_A 91 -WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRL-ALDG---------GEDGLQFYRRMAALPPYVLARGRA 159 (215)
T ss_dssp -HHHHHHHTTCCBSEEEECCCCCC----------------------------------CTTHHHHHHHTCCGGGBCSSSE
T ss_pred -hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccc-cccC---------CCcHHHHHHHHHHHHHHHhcCCCe
Confidence 5565 899999998776654433211 000000 0000 000112236889999999999999
Q ss_pred EEEEecc
Q 037735 189 AALVMFS 195 (329)
Q Consensus 189 l~~~~~g 195 (329)
|++...+
T Consensus 160 l~~~~~~ 166 (215)
T 4dzr_A 160 GVFLEVG 166 (215)
T ss_dssp EEEEECT
T ss_pred EEEEEEC
Confidence 5555443
No 131
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.45 E-value=1.6e-07 Score=82.07 Aligned_cols=98 Identities=12% Similarity=0.062 Sum_probs=70.4
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC---CCcceeeeccccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP---QSRSYYAAGVPGSFY 117 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~---~~~~~f~~gvpgsFy 117 (329)
.+..+|+|+|||+|..+..+.+. ..+|+..|.........-+.+. -.+-.+.. +++.
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~-----------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~---~d~~ 135 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHL-----------------VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRH---GDGW 135 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH-----------------SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEE---SCGG
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh-----------------CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEE---CCcc
Confidence 34679999999999999888641 1479999998766665544332 11223444 3565
Q ss_pred cccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecc
Q 037735 118 SSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFS 195 (329)
Q Consensus 118 ~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g 195 (329)
+.+.+.+++|+|+++.++||+.+ ...+.|+|||+|++++..
T Consensus 136 ~~~~~~~~~D~i~~~~~~~~~~~-------------------------------------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 136 QGWQARAPFDAIIVTAAPPEIPT-------------------------------------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp GCCGGGCCEEEEEESSBCSSCCT-------------------------------------HHHHTEEEEEEEEEEECS
T ss_pred cCCccCCCccEEEEccchhhhhH-------------------------------------HHHHhcccCcEEEEEEcC
Confidence 65667789999999999988531 235789999999999876
No 132
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.45 E-value=6.5e-07 Score=79.46 Aligned_cols=101 Identities=10% Similarity=0.026 Sum_probs=65.4
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHh---hhhcCCCCcceeeecccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNT---LFKSLPQSRSYYAAGVPGSFYS 118 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~---lf~~l~~~~~~f~~gvpgsFy~ 118 (329)
+..+|||+|||||..|..+.+ .. +..+|+..|+...+... ..+... ...++.+ +...
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~--------~~-------~~~~V~gvD~s~~~l~~~~~~a~~~~--~v~~~~~---d~~~ 116 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLAD--------IV-------DEGIIYAVEYSAKPFEKLLELVRERN--NIIPLLF---DASK 116 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHH--------HT-------TTSEEEEECCCHHHHHHHHHHHHHCS--SEEEECS---CTTC
T ss_pred CCCEEEEECCcCCHHHHHHHH--------Hc-------CCCEEEEEECCHHHHHHHHHHHhcCC--CeEEEEc---CCCC
Confidence 456899999999999988865 21 12489999998764322 222222 1233443 3322
Q ss_pred c---cCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecc
Q 037735 119 S---LFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFS 195 (329)
Q Consensus 119 ~---lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g 195 (329)
. ..+.+++|+++|+.+- | .+...+|+..++.|+|||+|++++..
T Consensus 117 ~~~~~~~~~~fD~V~~~~~~------~---------------------------~~~~~~l~~~~r~LkpgG~l~i~~~~ 163 (210)
T 1nt2_A 117 PWKYSGIVEKVDLIYQDIAQ------K---------------------------NQIEILKANAEFFLKEKGEVVIMVKA 163 (210)
T ss_dssp GGGTTTTCCCEEEEEECCCS------T---------------------------THHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred chhhcccccceeEEEEeccC------h---------------------------hHHHHHHHHHHHHhCCCCEEEEEEec
Confidence 1 2224899999997311 1 12235689999999999999999644
No 133
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=98.44 E-value=6.4e-07 Score=78.89 Aligned_cols=99 Identities=12% Similarity=0.001 Sum_probs=68.1
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC---CCC-cceeeecccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL---PQS-RSYYAAGVPGSF 116 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l---~~~-~~~f~~gvpgsF 116 (329)
.+..+|+|+|||+|..+..+.. . ..+|+..|+........-+.+ .-. .--++.| ++
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~--------~---------~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~---d~ 113 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCL--------A---------GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQG---TA 113 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHH--------T---------TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES---CT
T ss_pred CCCCEEEEecCCCCHHHHHHHH--------c---------CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeC---ch
Confidence 3457899999999999988874 1 258999999877665544332 111 2234443 56
Q ss_pred ccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecc
Q 037735 117 YSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFS 195 (329)
Q Consensus 117 y~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g 195 (329)
.+.+.+..++|++++..++ +.. +++...+.|+|||++++....
T Consensus 114 ~~~~~~~~~~D~v~~~~~~-----------------------------------~~~-~l~~~~~~LkpgG~lv~~~~~ 156 (204)
T 3njr_A 114 PAALADLPLPEAVFIGGGG-----------------------------------SQA-LYDRLWEWLAPGTRIVANAVT 156 (204)
T ss_dssp TGGGTTSCCCSEEEECSCC-----------------------------------CHH-HHHHHHHHSCTTCEEEEEECS
T ss_pred hhhcccCCCCCEEEECCcc-----------------------------------cHH-HHHHHHHhcCCCcEEEEEecC
Confidence 4444444579999976533 113 689999999999999998854
No 134
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.44 E-value=2.7e-07 Score=81.78 Aligned_cols=98 Identities=15% Similarity=0.038 Sum_probs=68.9
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCC-cceeeeccccccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQS-RSYYAAGVPGSFYSS 119 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~-~~~f~~gvpgsFy~~ 119 (329)
.+..+|+|+|||+|..+..+.. . . .+++..|.........-+.+... ..-+..+ ++.+.
T Consensus 69 ~~~~~vLdiG~G~G~~~~~l~~--------~-------~--~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~---d~~~~ 128 (231)
T 1vbf_A 69 HKGQKVLEIGTGIGYYTALIAE--------I-------V--DKVVSVEINEKMYNYASKLLSYYNNIKLILG---DGTLG 128 (231)
T ss_dssp CTTCEEEEECCTTSHHHHHHHH--------H-------S--SEEEEEESCHHHHHHHHHHHTTCSSEEEEES---CGGGC
T ss_pred CCCCEEEEEcCCCCHHHHHHHH--------H-------c--CEEEEEeCCHHHHHHHHHHHhhcCCeEEEEC---Ccccc
Confidence 3456999999999999988864 1 1 37899999877666555444322 1224443 55443
Q ss_pred cCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecc
Q 037735 120 LFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFS 195 (329)
Q Consensus 120 lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g 195 (329)
+.+++++|+|++..++|++ + ....+.|+|||++++.+..
T Consensus 129 ~~~~~~fD~v~~~~~~~~~---~----------------------------------~~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 129 YEEEKPYDRVVVWATAPTL---L----------------------------------CKPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp CGGGCCEEEEEESSBBSSC---C----------------------------------HHHHHTEEEEEEEEEEECS
T ss_pred cccCCCccEEEECCcHHHH---H----------------------------------HHHHHHcCCCcEEEEEEcC
Confidence 4457899999999999874 2 1345789999999999754
No 135
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=98.43 E-value=2.9e-07 Score=89.20 Aligned_cols=106 Identities=16% Similarity=0.123 Sum_probs=72.0
Q ss_pred ceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC-----C-cceeeecccccc
Q 037735 43 TFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ-----S-RSYYAAGVPGSF 116 (329)
Q Consensus 43 ~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~-----~-~~~f~~gvpgsF 116 (329)
..+|+|+|||+|..+..+.. . .|..+|+..|.........-+++.. . +--|.. +++
T Consensus 223 ~~~VLDlGcG~G~~s~~la~--------~-------~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~---~D~ 284 (375)
T 4dcm_A 223 EGEIVDLGCGNGVIGLTLLD--------K-------NPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMI---NNA 284 (375)
T ss_dssp CSEEEEETCTTCHHHHHHHH--------H-------CTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEE---CST
T ss_pred CCeEEEEeCcchHHHHHHHH--------H-------CCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEe---chh
Confidence 37999999999999998875 2 3446899999987665554443321 0 112333 356
Q ss_pred ccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEe
Q 037735 117 YSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVM 193 (329)
Q Consensus 117 y~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~ 193 (329)
++ .+|++++|+|+|+-.+|+...++.. ....||+...+.|+|||.|+++.
T Consensus 285 ~~-~~~~~~fD~Ii~nppfh~~~~~~~~--------------------------~~~~~l~~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 285 LS-GVEPFRFNAVLCNPPFHQQHALTDN--------------------------VAWEMFHHARRCLKINGELYIVA 334 (375)
T ss_dssp TT-TCCTTCEEEEEECCCC-------CC--------------------------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hc-cCCCCCeeEEEECCCcccCcccCHH--------------------------HHHHHHHHHHHhCCCCcEEEEEE
Confidence 44 5688899999999999986554422 22368999999999999999975
No 136
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.43 E-value=4.3e-07 Score=81.80 Aligned_cols=108 Identities=14% Similarity=0.130 Sum_probs=68.5
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC--Ccceeeecccccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ--SRSYYAAGVPGSFYS 118 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~--~~~~f~~gvpgsFy~ 118 (329)
....+|||+|||+|.++..+.+ . .| .+++.-|+.......+-+.... ....++.| ++..
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~--------~-------~~-~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~---~a~~ 119 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQE--------A-------PI-DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKG---LWED 119 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTT--------S-------CE-EEEEEEECCHHHHHHHHHHGGGCSSEEEEEES---CHHH
T ss_pred cCCCeEEEECCCccHHHHHHHH--------h-------CC-cEEEEEeCCHHHHHHHHHHHhhCCCceEEEee---hHHh
Confidence 4558999999999998877753 1 34 3788899987776654333221 11223333 3322
Q ss_pred --ccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEe
Q 037735 119 --SLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVM 193 (329)
Q Consensus 119 --~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~ 193 (329)
.-+|++++|.++.-.......... ..|...||++.+|.|||||+|++..
T Consensus 120 ~~~~~~~~~FD~i~~D~~~~~~~~~~--------------------------~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 120 VAPTLPDGHFDGILYDTYPLSEETWH--------------------------THQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp HGGGSCTTCEEEEEECCCCCBGGGTT--------------------------THHHHHHHHTHHHHEEEEEEEEECC
T ss_pred hcccccccCCceEEEeeeecccchhh--------------------------hcchhhhhhhhhheeCCCCEEEEEe
Confidence 237899999997432221111111 1266789999999999999998753
No 137
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.42 E-value=1.5e-07 Score=83.34 Aligned_cols=116 Identities=15% Similarity=0.047 Sum_probs=79.7
Q ss_pred hhHHHHHhhcccCCCCCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC---C
Q 037735 26 YDPRTAVTDLGTNAVPNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL---P 102 (329)
Q Consensus 26 ~~l~~ai~~i~~~~~~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l---~ 102 (329)
|.+++--..+... .+.+.+|+|+|||+|+.++.++. ..|..++...|....+..-.-+.+ .
T Consensus 34 p~ld~fY~~~~~~-l~~~~~VLDlGCG~GplAl~l~~---------------~~p~a~~~A~Di~~~~leiar~~~~~~g 97 (200)
T 3fzg_A 34 ATLNDFYTYVFGN-IKHVSSILDFGCGFNPLALYQWN---------------ENEKIIYHAYDIDRAEIAFLSSIIGKLK 97 (200)
T ss_dssp GGHHHHHHHHHHH-SCCCSEEEEETCTTHHHHHHHHC---------------SSCCCEEEEECSCHHHHHHHHHHHHHSC
T ss_pred HhHHHHHHHHHhh-cCCCCeEEEecCCCCHHHHHHHh---------------cCCCCEEEEEeCCHHHHHHHHHHHHhcC
Confidence 6666543321111 24578999999999999999874 256789999999887766544433 2
Q ss_pred CCcceeeeccccccccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHH
Q 037735 103 QSRSYYAAGVPGSFYSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQE 182 (329)
Q Consensus 103 ~~~~~f~~gvpgsFy~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~e 182 (329)
...++-++ +.-. ..|++++|++.++.++|-|.+.+.. +..-.+.
T Consensus 98 ~~~~v~~~----d~~~-~~~~~~~DvVLa~k~LHlL~~~~~a-------------------------------l~~v~~~ 141 (200)
T 3fzg_A 98 TTIKYRFL----NKES-DVYKGTYDVVFLLKMLPVLKQQDVN-------------------------------ILDFLQL 141 (200)
T ss_dssp CSSEEEEE----CCHH-HHTTSEEEEEEEETCHHHHHHTTCC-------------------------------HHHHHHT
T ss_pred CCccEEEe----cccc-cCCCCCcChhhHhhHHHhhhhhHHH-------------------------------HHHHHHH
Confidence 21123222 3423 3688999999999999999766644 6678899
Q ss_pred hccCceEEEEec
Q 037735 183 LVPGGLAALVMF 194 (329)
Q Consensus 183 L~pGG~l~~~~~ 194 (329)
|+|||+ ++++.
T Consensus 142 L~pggv-fISfp 152 (200)
T 3fzg_A 142 FHTQNF-VISFP 152 (200)
T ss_dssp CEEEEE-EEEEE
T ss_pred hCCCCE-EEEeC
Confidence 999976 45665
No 138
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.39 E-value=3.6e-07 Score=80.02 Aligned_cols=101 Identities=10% Similarity=0.065 Sum_probs=68.5
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC---CCcceeeeccccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP---QSRSYYAAGVPGSFY 117 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~---~~~~~f~~gvpgsFy 117 (329)
.+..+|+|+|||+|..+..+.... .|..+++..|...+.....-+.+. .....+..+ ++.
T Consensus 76 ~~~~~vLdiG~G~G~~~~~l~~~~--------------~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~---d~~ 138 (215)
T 2yxe_A 76 KPGMKVLEIGTGCGYHAAVTAEIV--------------GEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVG---DGT 138 (215)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHH--------------CTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEES---CGG
T ss_pred CCCCEEEEECCCccHHHHHHHHHh--------------CCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEEC---Ccc
Confidence 345799999999999999887522 233589999998766555433321 111223333 453
Q ss_pred cccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecc
Q 037735 118 SSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFS 195 (329)
Q Consensus 118 ~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g 195 (329)
..+.+++++|+|+++.++|++ + ....+.|+|||+|++.+..
T Consensus 139 ~~~~~~~~fD~v~~~~~~~~~---~----------------------------------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 139 LGYEPLAPYDRIYTTAAGPKI---P----------------------------------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp GCCGGGCCEEEEEESSBBSSC---C----------------------------------HHHHHTEEEEEEEEEEESS
T ss_pred cCCCCCCCeeEEEECCchHHH---H----------------------------------HHHHHHcCCCcEEEEEECC
Confidence 333336789999999999974 2 2446789999999999754
No 139
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.36 E-value=9.9e-07 Score=78.63 Aligned_cols=104 Identities=9% Similarity=0.052 Sum_probs=67.7
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC-Ccceeeecccccccc--
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ-SRSYYAAGVPGSFYS-- 118 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~-~~~~f~~gvpgsFy~-- 118 (329)
+..+|+|+|||+|..+..+.+.. .|..+|+..|+.......+.+.... ..-.|..+ ++.+
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~--------------g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~---d~~~~~ 139 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIV--------------GPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIE---DARHPH 139 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH--------------CTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECS---CTTCGG
T ss_pred CCCEEEEEcccCCHHHHHHHHHh--------------CCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEc---ccCChh
Confidence 35699999999999999987622 2335899999986543332221110 12234444 4433
Q ss_pred -ccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecc
Q 037735 119 -SLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFS 195 (329)
Q Consensus 119 -~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g 195 (329)
..++++++|+|++..+ .| .....++....+.|+|||++++++..
T Consensus 140 ~~~~~~~~~D~V~~~~~------~~---------------------------~~~~~~~~~~~~~LkpgG~l~i~~~~ 184 (233)
T 2ipx_A 140 KYRMLIAMVDVIFADVA------QP---------------------------DQTRIVALNAHTFLRNGGHFVISIKA 184 (233)
T ss_dssp GGGGGCCCEEEEEECCC------CT---------------------------THHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred hhcccCCcEEEEEEcCC------Cc---------------------------cHHHHHHHHHHHHcCCCeEEEEEEcc
Confidence 1246789999999544 11 01235688889999999999997764
No 140
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=98.36 E-value=3.4e-06 Score=76.59 Aligned_cols=121 Identities=11% Similarity=0.035 Sum_probs=71.8
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC---CC-cceeeeccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP---QS-RSYYAAGVPGSFY 117 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~---~~-~~~f~~gvpgsFy 117 (329)
+..+|+|+|||+|..++.+.+ + .+ .+|+..|+........-+++. -. +-.++.+ ++.
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~--------~-------~~-~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~---D~~ 109 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLST--------R-------TK-AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEY---DLK 109 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHT--------T-------CC-CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECS---CGG
T ss_pred CCCEEEEcCCchhHHHHHHHH--------h-------cC-CcEEEEECCHHHHHHHHHHHHHCCCcccEEEEEC---cHH
Confidence 467999999999999888764 2 22 289999998776665544332 11 2234444 453
Q ss_pred ccc--CCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHH-HHHHhhcHHHHHHHHHHHhccCceEEEEe
Q 037735 118 SSL--FPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAY-AAQFNNDFQTFLNTRAQELVPGGLAALVM 193 (329)
Q Consensus 118 ~~l--fp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay-~~q~~~D~~~FL~~ra~eL~pGG~l~~~~ 193 (329)
+-. ++++++|+|+|+-.++........ ++....+. ......++..|++..++-|+|||+|++..
T Consensus 110 ~~~~~~~~~~fD~Ii~npPy~~~~~~~~~------------~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 176 (259)
T 3lpm_A 110 KITDLIPKERADIVTCNPPYFATPDTSLK------------NTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVH 176 (259)
T ss_dssp GGGGTSCTTCEEEEEECCCC-----------------------------------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HhhhhhccCCccEEEECCCCCCCccccCC------------CCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEE
Confidence 332 578999999997655443110000 00000000 01123467899999999999999999954
No 141
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.34 E-value=7.7e-07 Score=84.79 Aligned_cols=101 Identities=17% Similarity=0.195 Sum_probs=67.3
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC---C-Ccceeeeccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP---Q-SRSYYAAGVPGSFY 117 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~---~-~~~~f~~gvpgsFy 117 (329)
+..+|+|+|||+|..+..+.+ . +..+|+..|+.. +....-+.+. - .+-.++.| ++.
T Consensus 64 ~~~~VLDiGcGtG~ls~~la~--------~--------g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~---d~~ 123 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFAAK--------A--------GAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKG---KIE 123 (340)
T ss_dssp TTCEEEEETCTTSHHHHHHHH--------T--------TCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEES---CTT
T ss_pred CCCEEEEeeccCcHHHHHHHH--------c--------CCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEe---eHH
Confidence 456999999999999887764 1 114799999874 5444333221 1 12234443 554
Q ss_pred cccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEE
Q 037735 118 SSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAA 190 (329)
Q Consensus 118 ~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~ 190 (329)
+..+|++++|+|+|....+-+... .++..+|..+.+-|+|||+++
T Consensus 124 ~~~~~~~~~D~Ivs~~~~~~l~~~----------------------------~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 124 EVHLPVEKVDVIISEWMGYFLLFE----------------------------SMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TSCCSCSCEEEEEECCCBTTBTTT----------------------------CHHHHHHHHHHHHEEEEEEEE
T ss_pred HhcCCCCcEEEEEEcCchhhccCH----------------------------HHHHHHHHHHHhhcCCCcEEE
Confidence 445788999999997632222211 255688999999999999998
No 142
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.34 E-value=1.7e-06 Score=81.85 Aligned_cols=101 Identities=21% Similarity=0.199 Sum_probs=67.6
Q ss_pred ceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC----Ccceeeecccccccc
Q 037735 43 TFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ----SRSYYAAGVPGSFYS 118 (329)
Q Consensus 43 ~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~----~~~~f~~gvpgsFy~ 118 (329)
..+|+|+|||+|..+..+.+ .+..+|+..|+. .+...+-+.+.. .+--++. +++.+
T Consensus 39 ~~~VLDiGcGtG~ls~~la~----------------~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~---~d~~~ 98 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAAK----------------HGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLR---GKLED 98 (328)
T ss_dssp TCEEEEETCTTSHHHHHHHH----------------TCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEE---SCTTT
T ss_pred CCEEEEecCccHHHHHHHHH----------------CCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEE---Cchhh
Confidence 46899999999998887764 122479999997 454443332211 1123444 35544
Q ss_pred ccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEE
Q 037735 119 SLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAAL 191 (329)
Q Consensus 119 ~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~ 191 (329)
-.+|++++|+|+|....+.+... .++..+|..+.+-|+|||+++.
T Consensus 99 ~~~~~~~~D~Ivs~~~~~~l~~~----------------------------~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 99 VHLPFPKVDIIISEWMGYFLLYE----------------------------SMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp SCCSSSCEEEEEECCCBTTBSTT----------------------------CCHHHHHHHHHHHEEEEEEEES
T ss_pred ccCCCCcccEEEEeCchhhcccH----------------------------HHHHHHHHHHHhhcCCCeEEEE
Confidence 44777899999998554443322 2456889999999999999973
No 143
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.33 E-value=4.2e-07 Score=83.52 Aligned_cols=100 Identities=10% Similarity=0.169 Sum_probs=69.9
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC----CCCcceeeecccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL----PQSRSYYAAGVPGSF 116 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l----~~~~~~f~~gvpgsF 116 (329)
.+..+|+|+|||+|..+..+...+ .|..+|+..|+........-+.+ ...+--|.. +++
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~--------------~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~---~d~ 171 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYAL--------------NGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSR---SDI 171 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHH--------------TTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEEC---SCT
T ss_pred CCcCEEEEecCCCCHHHHHHHHHc--------------CCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEE---Cch
Confidence 345799999999999999887532 23468999999876655543333 111223444 356
Q ss_pred ccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEec
Q 037735 117 YSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMF 194 (329)
Q Consensus 117 y~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~ 194 (329)
.+ .+|++++|++++ ++|.. ..+|+...+.|+|||+|++++.
T Consensus 172 ~~-~~~~~~fD~Vi~--------~~~~~----------------------------~~~l~~~~~~LkpgG~l~i~~~ 212 (275)
T 1yb2_A 172 AD-FISDQMYDAVIA--------DIPDP----------------------------WNHVQKIASMMKPGSVATFYLP 212 (275)
T ss_dssp TT-CCCSCCEEEEEE--------CCSCG----------------------------GGSHHHHHHTEEEEEEEEEEES
T ss_pred hc-cCcCCCccEEEE--------cCcCH----------------------------HHHHHHHHHHcCCCCEEEEEeC
Confidence 44 678889999998 23311 2568999999999999999873
No 144
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.33 E-value=2.5e-07 Score=86.01 Aligned_cols=114 Identities=13% Similarity=0.227 Sum_probs=70.2
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCC-----------cceeee
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQS-----------RSYYAA 110 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~-----------~~~f~~ 110 (329)
++.+|+|+|||||..+-.+.-.+ .+.+... ....+|+..|+..++....-+.+.+. ..||.-
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L----~e~~~~~---~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~ 177 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITL----ADALGMA---PGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMR 177 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHH----HHHHCSC---TTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEE
T ss_pred CCcEEEEeeccCChhHHHHHHHH----HHhcccC---CCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhc
Confidence 46899999999998543221111 1121110 11368999999988877655433110 012210
Q ss_pred c--------------------cccccccccCC-CCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHh
Q 037735 111 G--------------------VPGSFYSSLFP-KSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFN 169 (329)
Q Consensus 111 g--------------------vpgsFy~~lfp-~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~ 169 (329)
+ ..++..+..+| .+++|+|+|.+.|+|+++ +
T Consensus 178 ~~~~~~~~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~-~--------------------------- 229 (274)
T 1af7_A 178 GTGPHEGLVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDK-T--------------------------- 229 (274)
T ss_dssp CCTTSCSEEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCH-H---------------------------
T ss_pred cccCCCCceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCH-H---------------------------
Confidence 0 11223332244 578999999999999853 1
Q ss_pred hcHHHHHHHHHHHhccCceEEE
Q 037735 170 NDFQTFLNTRAQELVPGGLAAL 191 (329)
Q Consensus 170 ~D~~~FL~~ra~eL~pGG~l~~ 191 (329)
+..+.++.-++.|+|||+|++
T Consensus 230 -~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 230 -TQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp -HHHHHHHHHGGGEEEEEEEEE
T ss_pred -HHHHHHHHHHHHhCCCcEEEE
Confidence 235789999999999999987
No 145
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.33 E-value=1.5e-07 Score=89.56 Aligned_cols=106 Identities=17% Similarity=0.187 Sum_probs=74.5
Q ss_pred ceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC--CCcceeeecccccccccc
Q 037735 43 TFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP--QSRSYYAAGVPGSFYSSL 120 (329)
Q Consensus 43 ~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~--~~~~~f~~gvpgsFy~~l 120 (329)
..+|+|+|||+|..+..+.. . .|..+|+..|.........-+.+. .....+.. ++++.
T Consensus 197 ~~~VLDlGcG~G~~~~~la~--------~-------~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~---~d~~~-- 256 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVAFAR--------H-------SPKIRLTLCDVSAPAVEASRATLAANGVEGEVFA---SNVFS-- 256 (343)
T ss_dssp CSBCCBTTCTTSHHHHHHHH--------H-------CTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEE---CSTTT--
T ss_pred CCeEEEecCccCHHHHHHHH--------H-------CCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEE---ccccc--
Confidence 45899999999999988864 2 244689999998766555443331 11122333 35544
Q ss_pred CCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEec
Q 037735 121 FPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMF 194 (329)
Q Consensus 121 fp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~ 194 (329)
++++++|+|+|+..+||..... ..+...+|+..++.|+|||.|++...
T Consensus 257 ~~~~~fD~Iv~~~~~~~g~~~~--------------------------~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 257 EVKGRFDMIISNPPFHDGMQTS--------------------------LDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp TCCSCEEEEEECCCCCSSSHHH--------------------------HHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred cccCCeeEEEECCCcccCccCC--------------------------HHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 3478999999999999832111 23567899999999999999999764
No 146
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.31 E-value=1.4e-06 Score=78.48 Aligned_cols=114 Identities=13% Similarity=0.026 Sum_probs=71.5
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCC-------c---------
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQS-------R--------- 105 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~-------~--------- 105 (329)
...+|+|+|||+|..+..+...+ + .+..+|+..|+........-+.+... +
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~------~-------~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~ 117 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLH------R-------RSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSE 117 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHT------G-------GGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHh------c-------cCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhh
Confidence 56899999999999888876521 0 12358999999866655443222111 0
Q ss_pred ----------------ce-------------eeeccccccccccC-----CCCceeEEEeccceecccCCCCCCCCccce
Q 037735 106 ----------------SY-------------YAAGVPGSFYSSLF-----PKSSLHFVHSSYTLHWLSKVPKVDGVEGSI 151 (329)
Q Consensus 106 ----------------~~-------------f~~gvpgsFy~~lf-----p~~s~dl~~Ss~alhWLs~~p~~~~n~g~i 151 (329)
-- |..+ ++.+.+. +.+++|+|+|+..++-..+.+..
T Consensus 118 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~------- 187 (250)
T 1o9g_A 118 RFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTA---DVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQ------- 187 (250)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEEC---CTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSC-------
T ss_pred hcccccchhhhhhhhhhhhhccccccccccceeec---ccccccccccccCCCCceEEEeCCCeecccccccc-------
Confidence 01 4443 4544332 44589999998655543332210
Q ss_pred eecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEe
Q 037735 152 QTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVM 193 (329)
Q Consensus 152 ~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~ 193 (329)
. ...+...||+.-++.|+|||+|+++.
T Consensus 188 ----~-----------~~~~~~~~l~~~~~~LkpgG~l~~~~ 214 (250)
T 1o9g_A 188 ----V-----------PGQPVAGLLRSLASALPAHAVIAVTD 214 (250)
T ss_dssp ----C-----------CHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred ----c-----------cccHHHHHHHHHHHhcCCCcEEEEeC
Confidence 0 01345688999999999999999843
No 147
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.31 E-value=1.6e-06 Score=80.23 Aligned_cols=107 Identities=15% Similarity=0.089 Sum_probs=68.8
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCC-CcchHHhhhhcC-----CCC--------cce
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDH-SDNDFNTLFKSL-----PQS--------RSY 107 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDL-p~ndfn~lf~~l-----~~~--------~~~ 107 (329)
...+|+|+|||+|..++.+.. . ...+|+..|+ .......+-++. ... +-.
T Consensus 79 ~~~~vLDlG~G~G~~~~~~a~--------~--------~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~ 142 (281)
T 3bzb_A 79 AGKTVCELGAGAGLVSIVAFL--------A--------GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPK 142 (281)
T ss_dssp TTCEEEETTCTTSHHHHHHHH--------T--------TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCE
T ss_pred CCCeEEEecccccHHHHHHHH--------c--------CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeE
Confidence 346899999999999887653 1 1137999999 454444433332 110 111
Q ss_pred eeeccccccccccC---CCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhc
Q 037735 108 YAAGVPGSFYSSLF---PKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELV 184 (329)
Q Consensus 108 f~~gvpgsFy~~lf---p~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~ 184 (329)
+....-++....+. +++++|+|+++.++++.. +...+|+...+-|+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~-------------------------------~~~~ll~~l~~~Lk 191 (281)
T 3bzb_A 143 VVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQ-------------------------------AHDALLRSVKMLLA 191 (281)
T ss_dssp EEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGG-------------------------------GHHHHHHHHHHHBC
T ss_pred EEEecCCCccHHHHhhccCCCCCEEEEeCcccChH-------------------------------HHHHHHHHHHHHhc
Confidence 22222223223333 578999999999888843 34478999999999
Q ss_pred ---c--CceEEEEecc
Q 037735 185 ---P--GGLAALVMFS 195 (329)
Q Consensus 185 ---p--GG~l~~~~~g 195 (329)
| ||.+++.+..
T Consensus 192 ~~~p~~gG~l~v~~~~ 207 (281)
T 3bzb_A 192 LPANDPTAVALVTFTH 207 (281)
T ss_dssp CTTTCTTCEEEEEECC
T ss_pred ccCCCCCCEEEEEEEe
Confidence 9 9998886644
No 148
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=98.31 E-value=2.5e-06 Score=80.30 Aligned_cols=99 Identities=8% Similarity=-0.095 Sum_probs=70.8
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC---CCCcceeeeccccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL---PQSRSYYAAGVPGSFY 117 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l---~~~~~~f~~gvpgsFy 117 (329)
.+..+|||+|||+|+.|..++. + .+..+|+.-|+...+....-+.+ .-.+--|+.|. +.
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA--------~-------~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gD---a~ 182 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLS--------H-------VYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGD---ET 182 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHH--------H-------TTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESC---GG
T ss_pred CCcCEEEEECCCccHHHHHHHH--------H-------ccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECc---hh
Confidence 4568999999999998877654 2 23468999999877665543332 21233466653 43
Q ss_pred cccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEe
Q 037735 118 SSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVM 193 (329)
Q Consensus 118 ~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~ 193 (329)
+ +|++++|+|++... +| |...+|+...+.|+|||+|++..
T Consensus 183 ~--l~d~~FDvV~~~a~------~~----------------------------d~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 183 V--IDGLEFDVLMVAAL------AE----------------------------PKRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp G--GGGCCCSEEEECTT------CS----------------------------CHHHHHHHHHHHCCTTCEEEEEE
T ss_pred h--CCCCCcCEEEECCC------cc----------------------------CHHHHHHHHHHHcCCCcEEEEEc
Confidence 3 46899999998654 23 44588999999999999999876
No 149
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.30 E-value=2e-06 Score=78.65 Aligned_cols=120 Identities=18% Similarity=0.218 Sum_probs=73.9
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC---C----cceeeecccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ---S----RSYYAAGVPG 114 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~---~----~~~f~~gvpg 114 (329)
+..+|+|+|||+|..++.+.+ + .|..+|+..|+-.......-+++.. . +-.++.+
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~--------~-------~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~--- 97 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAA--------R-------LEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEA--- 97 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHH--------H-------CTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEEC---
T ss_pred CCCEEEEeCChHhHHHHHHHH--------h-------CCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeC---
Confidence 457999999999999988875 2 2346899999987666665554432 1 1234444
Q ss_pred ccccc-------cCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHH-HhhcHHHHHHHHHHHhccC
Q 037735 115 SFYSS-------LFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQ-FNNDFQTFLNTRAQELVPG 186 (329)
Q Consensus 115 sFy~~-------lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q-~~~D~~~FL~~ra~eL~pG 186 (329)
++.+- .++++++|+|+|+--+++..... .++..++.+.. ...++..||+..++-|+||
T Consensus 98 D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~--------------~~~~~~~~a~~~~~~~~~~~l~~~~~~Lkpg 163 (260)
T 2ozv_A 98 DVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRR--------------TPDALKAEAHAMTEGLFEDWIRTASAIMVSG 163 (260)
T ss_dssp CTTCCHHHHHHTTCCTTCEEEEEECCCC-----------------------------------CCHHHHHHHHHHHEEEE
T ss_pred CHHHHhhhhhhhccCCCCcCEEEECCCCcCCCCCC--------------CcCHHHHHHhhcCcCCHHHHHHHHHHHcCCC
Confidence 45332 36789999999986655542111 01111111111 1235789999999999999
Q ss_pred ceEEEEe
Q 037735 187 GLAALVM 193 (329)
Q Consensus 187 G~l~~~~ 193 (329)
|+|++..
T Consensus 164 G~l~~~~ 170 (260)
T 2ozv_A 164 GQLSLIS 170 (260)
T ss_dssp EEEEEEE
T ss_pred CEEEEEE
Confidence 9999975
No 150
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.30 E-value=5.7e-07 Score=94.75 Aligned_cols=108 Identities=13% Similarity=0.049 Sum_probs=79.1
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC--------C-Ccceeeecc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP--------Q-SRSYYAAGV 112 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~--------~-~~~~f~~gv 112 (329)
+..+|||+|||+|.++..+.. .. .|..+|+..|+...+....-+.+. . .+--|..|
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr--------~g------~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqG- 785 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLD--------YP------TSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDG- 785 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTS--------SC------CCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEES-
T ss_pred CCCEEEEECCCCCHHHHHHHH--------hC------CCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEEC-
Confidence 457999999999999988863 10 233589999999877766544221 1 12234444
Q ss_pred ccccccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEE
Q 037735 113 PGSFYSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALV 192 (329)
Q Consensus 113 pgsFy~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~ 192 (329)
++.+..++++++|+|+++.++||+.+. +...|++...+.|+|| +++++
T Consensus 786 --Da~dLp~~d~sFDlVV~~eVLeHL~dp-----------------------------~l~~~L~eI~RvLKPG-~LIIS 833 (950)
T 3htx_A 786 --SILEFDSRLHDVDIGTCLEVIEHMEED-----------------------------QACEFGEKVLSLFHPK-LLIVS 833 (950)
T ss_dssp --CTTSCCTTSCSCCEEEEESCGGGSCHH-----------------------------HHHHHHHHHHHTTCCS-EEEEE
T ss_pred --chHhCCcccCCeeEEEEeCchhhCChH-----------------------------HHHHHHHHHHHHcCCC-EEEEE
Confidence 565656788999999999999997531 2347899999999999 88888
Q ss_pred eccc
Q 037735 193 MFSV 196 (329)
Q Consensus 193 ~~g~ 196 (329)
++..
T Consensus 834 TPN~ 837 (950)
T 3htx_A 834 TPNY 837 (950)
T ss_dssp ECBG
T ss_pred ecCc
Confidence 8654
No 151
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.30 E-value=2.2e-06 Score=78.16 Aligned_cols=101 Identities=14% Similarity=0.155 Sum_probs=70.2
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC----C--CCcceeeeccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL----P--QSRSYYAAGVPGS 115 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l----~--~~~~~f~~gvpgs 115 (329)
+..+|+|+|||+|.++..+...+ .|..+++..|+........-+.+ . ..+-.+.. ++
T Consensus 99 ~~~~vLdiG~G~G~~~~~l~~~~--------------~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~---~d 161 (280)
T 1i9g_A 99 PGARVLEAGAGSGALTLSLLRAV--------------GPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVV---SD 161 (280)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH--------------CTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEEC---SC
T ss_pred CCCEEEEEcccccHHHHHHHHHh--------------CCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEE---Cc
Confidence 45689999999999999887532 24468999999766655543332 1 11122333 46
Q ss_pred cccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecc
Q 037735 116 FYSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFS 195 (329)
Q Consensus 116 Fy~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g 195 (329)
+.+..++++++|++++.. |.. ..+|....+.|+|||.+++.+..
T Consensus 162 ~~~~~~~~~~~D~v~~~~--------~~~----------------------------~~~l~~~~~~L~pgG~l~~~~~~ 205 (280)
T 1i9g_A 162 LADSELPDGSVDRAVLDM--------LAP----------------------------WEVLDAVSRLLVAGGVLMVYVAT 205 (280)
T ss_dssp GGGCCCCTTCEEEEEEES--------SCG----------------------------GGGHHHHHHHEEEEEEEEEEESS
T ss_pred hHhcCCCCCceeEEEECC--------cCH----------------------------HHHHHHHHHhCCCCCEEEEEeCC
Confidence 756567889999999832 211 15589999999999999998854
No 152
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.30 E-value=9.1e-07 Score=76.07 Aligned_cols=116 Identities=18% Similarity=0.159 Sum_probs=69.9
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhc--CCCCccceEEecCCCcchHHhhhhcCCCCcceee-ecccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHE--CPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYA-AGVPGSFYS 118 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~--~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~-~gvpgsFy~ 118 (329)
+..+|+|+|||+|..|..+.+ ++... ....|..+|+..|+.... .++ ...+. . +++..
T Consensus 22 ~~~~vLDlGcG~G~~~~~la~--------~~~~~~~~~~~~~~~v~~vD~s~~~------~~~--~~~~~~~---~d~~~ 82 (196)
T 2nyu_A 22 PGLRVLDCGAAPGAWSQVAVQ--------KVNAAGTDPSSPVGFVLGVDLLHIF------PLE--GATFLCP---ADVTD 82 (196)
T ss_dssp TTCEEEEETCCSCHHHHHHHH--------HTTTTCCCTTSCCCEEEEECSSCCC------CCT--TCEEECS---CCTTS
T ss_pred CCCEEEEeCCCCCHHHHHHHH--------HhccccccccCCCceEEEEechhcc------cCC--CCeEEEe---ccCCC
Confidence 457999999999999998875 22110 001223589999987521 111 11223 2 23332
Q ss_pred --------ccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEE
Q 037735 119 --------SLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAA 190 (329)
Q Consensus 119 --------~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~ 190 (329)
..++++++|+|+|..++||.-... ... .........+|+...+.|+|||.|+
T Consensus 83 ~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~------------------~~~--~~~~~~~~~~l~~~~~~LkpgG~lv 142 (196)
T 2nyu_A 83 PRTSQRILEVLPGRRADVILSDMAPNATGFRD------------------LDH--DRLISLCLTLLSVTPDILQPGGTFL 142 (196)
T ss_dssp HHHHHHHHHHSGGGCEEEEEECCCCCCCSCHH------------------HHH--HHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred HHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcc------------------cCH--HHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 125667999999987766632100 000 0011233578999999999999999
Q ss_pred EEeccc
Q 037735 191 LVMFSV 196 (329)
Q Consensus 191 ~~~~g~ 196 (329)
+..+..
T Consensus 143 ~~~~~~ 148 (196)
T 2nyu_A 143 CKTWAG 148 (196)
T ss_dssp EEECCS
T ss_pred EEecCC
Confidence 987643
No 153
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.29 E-value=6.5e-07 Score=80.40 Aligned_cols=98 Identities=13% Similarity=0.061 Sum_probs=67.9
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC---CCCcceeeecccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL---PQSRSYYAAGVPGSFYS 118 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l---~~~~~~f~~gvpgsFy~ 118 (329)
+..+|+|+|||+|..+..+.. . .|..+|+..|....+...+-+.. .-..--|+.| ++.+
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~--------~-------~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~---d~~~ 131 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKI--------C-------FPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHD---RAET 131 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHH--------H-------CTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEES---CHHH
T ss_pred CCCEEEEecCCCCHHHHHHHH--------h-------CCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEec---cHHH
Confidence 457999999999999998864 1 24468999999876655543322 1111234443 5544
Q ss_pred ccCC---CCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEE
Q 037735 119 SLFP---KSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALV 192 (329)
Q Consensus 119 ~lfp---~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~ 192 (329)
-.++ ++++|+|+|.. ++ |+..+++..++.|+|||++++.
T Consensus 132 ~~~~~~~~~~fD~V~~~~-------~~----------------------------~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 132 FGQRKDVRESYDIVTARA-------VA----------------------------RLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp HTTCTTTTTCEEEEEEEC-------CS----------------------------CHHHHHHHHGGGEEEEEEEEEE
T ss_pred hcccccccCCccEEEEec-------cC----------------------------CHHHHHHHHHHhcCCCCEEEEE
Confidence 3343 68999999855 11 4558899999999999999885
No 154
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.29 E-value=1.2e-06 Score=74.31 Aligned_cols=106 Identities=8% Similarity=-0.062 Sum_probs=68.2
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCC----cceeeeccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQS----RSYYAAGVPGSFY 117 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~----~~~f~~gvpgsFy 117 (329)
+..+|+|+|||+|..+..+.+ .+..+|+..|+.......+-+.+... +-.+.. +++.
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~~----------------~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~---~d~~ 91 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAVS----------------RGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLK---MEAE 91 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHHH----------------TTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEEC---SCHH
T ss_pred CCCeEEEeCCCCCHHHHHHHH----------------cCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEE---CcHH
Confidence 456899999999999988764 12248999999877666554433211 122443 3554
Q ss_pred ccc-CCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHH--HHHhccCceEEEEec
Q 037735 118 SSL-FPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTR--AQELVPGGLAALVMF 194 (329)
Q Consensus 118 ~~l-fp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~r--a~eL~pGG~l~~~~~ 194 (329)
+.+ ..++++|+++++..+++- ++..+++.- .+.|+|||++++.+.
T Consensus 92 ~~~~~~~~~fD~i~~~~~~~~~--------------------------------~~~~~~~~l~~~~~L~~gG~l~~~~~ 139 (177)
T 2esr_A 92 RAIDCLTGRFDLVFLDPPYAKE--------------------------------TIVATIEALAAKNLLSEQVMVVCETD 139 (177)
T ss_dssp HHHHHBCSCEEEEEECCSSHHH--------------------------------HHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred HhHHhhcCCCCEEEECCCCCcc--------------------------------hHHHHHHHHHhCCCcCCCcEEEEEEC
Confidence 422 345679999987554331 112333333 488999999999987
Q ss_pred ccCC
Q 037735 195 SVPD 198 (329)
Q Consensus 195 g~~~ 198 (329)
....
T Consensus 140 ~~~~ 143 (177)
T 2esr_A 140 KTVL 143 (177)
T ss_dssp TTCC
T ss_pred Cccc
Confidence 7654
No 155
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.28 E-value=1.8e-06 Score=76.89 Aligned_cols=101 Identities=10% Similarity=0.071 Sum_probs=68.1
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCC-cceeeecccccccc--
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQS-RSYYAAGVPGSFYS-- 118 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~-~~~f~~gvpgsFy~-- 118 (329)
+..+|+|+|||+|..+..+.+ .+ +..+|+..|........+-+..... +-.++.+ ++..
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~--------~~-------~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~---d~~~~~ 135 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVAD--------IA-------DKGIVYAIEYAPRIMRELLDACAERENIIPILG---DANKPQ 135 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHH--------HT-------TTSEEEEEESCHHHHHHHHHHTTTCTTEEEEEC---CTTCGG
T ss_pred CCCEEEEEcccCCHHHHHHHH--------Hc-------CCcEEEEEECCHHHHHHHHHHhhcCCCeEEEEC---CCCCcc
Confidence 457899999999999998875 21 2358999999887666554443221 2234444 3432
Q ss_pred --ccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEec
Q 037735 119 --SLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMF 194 (329)
Q Consensus 119 --~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~ 194 (329)
..++ +++|+++ |++.+.. ....+|+...+.|+|||.+++++.
T Consensus 136 ~~~~~~-~~~D~v~-----~~~~~~~----------------------------~~~~~l~~~~~~LkpgG~l~i~~~ 179 (230)
T 1fbn_A 136 EYANIV-EKVDVIY-----EDVAQPN----------------------------QAEILIKNAKWFLKKGGYGMIAIK 179 (230)
T ss_dssp GGTTTS-CCEEEEE-----ECCCSTT----------------------------HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccccC-ccEEEEE-----EecCChh----------------------------HHHHHHHHHHHhCCCCcEEEEEEe
Confidence 3345 7899998 4433221 224678999999999999999843
No 156
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.28 E-value=9.7e-07 Score=76.67 Aligned_cols=97 Identities=10% Similarity=-0.058 Sum_probs=67.2
Q ss_pred ceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC---CCCcceeeeccccccccc
Q 037735 43 TFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL---PQSRSYYAAGVPGSFYSS 119 (329)
Q Consensus 43 ~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l---~~~~~~f~~gvpgsFy~~ 119 (329)
..+|+|+|||+|..+..+.. . .|..+++..|........+-+.+ ....-.+.. +++. .
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~--------~-------~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~---~d~~-~ 126 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSI--------V-------RPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQ---SRVE-E 126 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHH--------H-------CTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEE---CCTT-T
T ss_pred CCeEEEECCCCCHHHHHHHH--------H-------CCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEe---cchh-h
Confidence 46999999999999998875 2 23468999999876655543332 111122333 3553 3
Q ss_pred cCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEe
Q 037735 120 LFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVM 193 (329)
Q Consensus 120 lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~ 193 (329)
+.|++++|+++|.. ++ ++..+|+..++.|+|||++++..
T Consensus 127 ~~~~~~~D~i~~~~-------~~----------------------------~~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 127 FPSEPPFDGVISRA-------FA----------------------------SLNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp SCCCSCEEEEECSC-------SS----------------------------SHHHHHHHHTTSEEEEEEEEEEE
T ss_pred CCccCCcCEEEEec-------cC----------------------------CHHHHHHHHHHhcCCCcEEEEEe
Confidence 44678999999743 11 34588999999999999999873
No 157
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.28 E-value=1.7e-06 Score=81.12 Aligned_cols=111 Identities=13% Similarity=0.018 Sum_probs=70.9
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC--------CCcceeeecc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP--------QSRSYYAAGV 112 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~--------~~~~~f~~gv 112 (329)
+++.+|||+|||+|..+..+++ . .+..+|+..|+........-+.++ ..+--+..|.
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~--------~-------~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D 146 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTR--------H-------KNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDD 146 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHT--------C-------TTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSC
T ss_pred CCCCEEEEEeCChhHHHHHHHh--------C-------CCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEECh
Confidence 5578999999999999888863 1 233589999998766655444332 1233455655
Q ss_pred ccccccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEE
Q 037735 113 PGSFYSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALV 192 (329)
Q Consensus 113 pgsFy~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~ 192 (329)
...|.. .+++++|+|++...-+|. |.. .. .-..|++..++.|+|||+|++.
T Consensus 147 ~~~~l~--~~~~~fDvIi~D~~~p~~---~~~-----------------~l-------~~~~f~~~~~~~LkpgG~lv~~ 197 (294)
T 3adn_A 147 GVNFVN--QTSQTFDVIISDCTDPIG---PGE-----------------SL-------FTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp SCC-----CCCCCEEEEEECC-------------------------------------CCHHHHHHHHHTEEEEEEEEEE
T ss_pred HHHHHh--hcCCCccEEEECCCCccC---cch-----------------hc-------cHHHHHHHHHHhcCCCCEEEEe
Confidence 444432 257899999997766552 211 00 0147899999999999999998
Q ss_pred ecc
Q 037735 193 MFS 195 (329)
Q Consensus 193 ~~g 195 (329)
..+
T Consensus 198 ~~s 200 (294)
T 3adn_A 198 NGV 200 (294)
T ss_dssp EEE
T ss_pred cCC
Confidence 744
No 158
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.27 E-value=4.8e-07 Score=81.00 Aligned_cols=100 Identities=12% Similarity=0.082 Sum_probs=67.9
Q ss_pred eEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC---CC--Ccceeeecccccccc
Q 037735 44 FRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL---PQ--SRSYYAAGVPGSFYS 118 (329)
Q Consensus 44 ~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l---~~--~~~~f~~gvpgsFy~ 118 (329)
.+|+|+|||+|..|+.+...+ .+..+|+..|+........-+.+ .- .+--+..| ++.+
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~--------------~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~g---da~~ 120 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGL--------------ADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLS---RPLD 120 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHS--------------CTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECS---CHHH
T ss_pred CCEEEEcCCchHHHHHHHHhC--------------CCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEc---CHHH
Confidence 489999999999999887522 23468999999877665543332 21 12334554 4433
Q ss_pred cc--CCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEec
Q 037735 119 SL--FPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMF 194 (329)
Q Consensus 119 ~l--fp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~ 194 (329)
-+ ++++++|+|++... . .++..||+...+-|+|||++++...
T Consensus 121 ~l~~~~~~~fD~V~~d~~--------~--------------------------~~~~~~l~~~~~~LkpGG~lv~dn~ 164 (221)
T 3dr5_A 121 VMSRLANDSYQLVFGQVS--------P--------------------------MDLKALVDAAWPLLRRGGALVLADA 164 (221)
T ss_dssp HGGGSCTTCEEEEEECCC--------T--------------------------TTHHHHHHHHHHHEEEEEEEEETTT
T ss_pred HHHHhcCCCcCeEEEcCc--------H--------------------------HHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 33 34789999987531 1 1344688999999999999998443
No 159
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.27 E-value=1.3e-06 Score=78.60 Aligned_cols=101 Identities=14% Similarity=0.158 Sum_probs=70.6
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC---CCCc-ceeeecccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL---PQSR-SYYAAGVPGSF 116 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l---~~~~-~~f~~gvpgsF 116 (329)
.+..+|+|+|||+|..+..+...+ .|..+++..|+........-+.+ .-.. -.+.. +++
T Consensus 92 ~~~~~vldiG~G~G~~~~~l~~~~--------------~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~---~d~ 154 (255)
T 3mb5_A 92 SPGDFIVEAGVGSGALTLFLANIV--------------GPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKL---KDI 154 (255)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHH--------------CTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEEC---SCG
T ss_pred CCCCEEEEecCCchHHHHHHHHHh--------------CCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEE---Cch
Confidence 345799999999999999987633 34468999999876665544332 1111 23343 456
Q ss_pred ccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecc
Q 037735 117 YSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFS 195 (329)
Q Consensus 117 y~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g 195 (329)
. ..+|++++|++++. +|.. ..+|+...+.|+|||.+++....
T Consensus 155 ~-~~~~~~~~D~v~~~--------~~~~----------------------------~~~l~~~~~~L~~gG~l~~~~~~ 196 (255)
T 3mb5_A 155 Y-EGIEEENVDHVILD--------LPQP----------------------------ERVVEHAAKALKPGGFFVAYTPC 196 (255)
T ss_dssp G-GCCCCCSEEEEEEC--------SSCG----------------------------GGGHHHHHHHEEEEEEEEEEESS
T ss_pred h-hccCCCCcCEEEEC--------CCCH----------------------------HHHHHHHHHHcCCCCEEEEEECC
Confidence 4 45888999999983 2311 25689999999999999987643
No 160
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=98.27 E-value=1.1e-06 Score=77.06 Aligned_cols=104 Identities=16% Similarity=0.069 Sum_probs=68.3
Q ss_pred ceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC--C---Ccceeeeccccccc
Q 037735 43 TFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP--Q---SRSYYAAGVPGSFY 117 (329)
Q Consensus 43 ~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~--~---~~~~f~~gvpgsFy 117 (329)
..+|+|+|||+|..++.++. + .. .+|+..|+...+...+-+++. . .+--|+.+ ++.
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~--------~-------~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~---d~~ 114 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALS--------R-------QA-KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQ---SSL 114 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHH--------T-------TC-SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECS---CHH
T ss_pred CCeEEEcCCccCHHHHHHHH--------c-------cC-CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEEC---CHH
Confidence 46899999999999988654 1 11 379999998877766554431 1 12234444 554
Q ss_pred cccC--CCCc-eeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHH--HHHhccCceEEEE
Q 037735 118 SSLF--PKSS-LHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTR--AQELVPGGLAALV 192 (329)
Q Consensus 118 ~~lf--p~~s-~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~r--a~eL~pGG~l~~~ 192 (329)
+-+. ++++ +|+|+++..+|+ . +...+|+.. ++-|+|||+++++
T Consensus 115 ~~~~~~~~~~~fD~I~~~~~~~~----~----------------------------~~~~~l~~~~~~~~LkpgG~l~i~ 162 (201)
T 2ift_A 115 DFLKQPQNQPHFDVVFLDPPFHF----N----------------------------LAEQAISLLCENNWLKPNALIYVE 162 (201)
T ss_dssp HHTTSCCSSCCEEEEEECCCSSS----C----------------------------HHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred HHHHhhccCCCCCEEEECCCCCC----c----------------------------cHHHHHHHHHhcCccCCCcEEEEE
Confidence 4332 4678 999998766542 1 223445544 5569999999998
Q ss_pred ecccC
Q 037735 193 MFSVP 197 (329)
Q Consensus 193 ~~g~~ 197 (329)
+....
T Consensus 163 ~~~~~ 167 (201)
T 2ift_A 163 TEKDK 167 (201)
T ss_dssp EESSS
T ss_pred ECCCC
Confidence 86544
No 161
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.26 E-value=2.5e-06 Score=76.94 Aligned_cols=114 Identities=18% Similarity=0.134 Sum_probs=70.8
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC-----------CCCcceeee
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL-----------PQSRSYYAA 110 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l-----------~~~~~~f~~ 110 (329)
+..+|||+|||+|..++.+.. . .|...|+..|........+-+.+ .-..--++.
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~--------~-------~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~ 113 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSP--------A-------FPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLR 113 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHH--------H-------STTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHH--------h-------CCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEe
Confidence 457899999999999998875 2 34468999999876654432211 111223555
Q ss_pred ccccccccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEE
Q 037735 111 GVPGSFYSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAA 190 (329)
Q Consensus 111 gvpgsFy~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~ 190 (329)
+..-++....++.+++|.++....=-|..... .+.++. -..||+..++.|+|||.|+
T Consensus 114 ~D~~~~l~~~~~~~~~d~v~~~~p~p~~k~~~----~~~r~~-------------------~~~~l~~~~~~LkpgG~l~ 170 (246)
T 2vdv_E 114 GNAMKFLPNFFEKGQLSKMFFCFPDPHFKQRK----HKARII-------------------TNTLLSEYAYVLKEGGVVY 170 (246)
T ss_dssp CCTTSCGGGTSCTTCEEEEEEESCCCC----------CSSCC-------------------CHHHHHHHHHHEEEEEEEE
T ss_pred ccHHHHHHHhccccccCEEEEECCCcccccch----hHHhhc-------------------cHHHHHHHHHHcCCCCEEE
Confidence 54334444568899999998544222211100 000000 0378999999999999999
Q ss_pred EEe
Q 037735 191 LVM 193 (329)
Q Consensus 191 ~~~ 193 (329)
+.+
T Consensus 171 ~~t 173 (246)
T 2vdv_E 171 TIT 173 (246)
T ss_dssp EEE
T ss_pred EEe
Confidence 965
No 162
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.25 E-value=6.6e-07 Score=75.91 Aligned_cols=100 Identities=18% Similarity=0.165 Sum_probs=67.8
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC---CC-Ccceeeecccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL---PQ-SRSYYAAGVPGSF 116 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l---~~-~~~~f~~gvpgsF 116 (329)
.+..+|+|+|||+|..+..+.. . . .+++..|.........-+.+ .. ..-.+..+ ++
T Consensus 32 ~~~~~vldiG~G~G~~~~~l~~--------~-------~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~---d~ 91 (192)
T 1l3i_A 32 GKNDVAVDVGCGTGGVTLELAG--------R-------V--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEG---DA 91 (192)
T ss_dssp CTTCEEEEESCTTSHHHHHHHT--------T-------S--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEES---CH
T ss_pred CCCCEEEEECCCCCHHHHHHHH--------h-------c--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEec---CH
Confidence 3457999999999999888764 1 1 47999998766555543322 11 11223333 45
Q ss_pred ccccCCC-CceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecc
Q 037735 117 YSSLFPK-SSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFS 195 (329)
Q Consensus 117 y~~lfp~-~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g 195 (329)
.+ .+|. +++|+++++..+++ +..+|+...+.|+|||.+++....
T Consensus 92 ~~-~~~~~~~~D~v~~~~~~~~----------------------------------~~~~l~~~~~~l~~gG~l~~~~~~ 136 (192)
T 1l3i_A 92 PE-ALCKIPDIDIAVVGGSGGE----------------------------------LQEILRIIKDKLKPGGRIIVTAIL 136 (192)
T ss_dssp HH-HHTTSCCEEEEEESCCTTC----------------------------------HHHHHHHHHHTEEEEEEEEEEECB
T ss_pred HH-hcccCCCCCEEEECCchHH----------------------------------HHHHHHHHHHhcCCCcEEEEEecC
Confidence 34 3444 68999998866543 247799999999999999998753
No 163
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.25 E-value=9.8e-07 Score=73.82 Aligned_cols=104 Identities=11% Similarity=0.014 Sum_probs=66.5
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC--Ccceeeeccccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ--SRSYYAAGVPGSFYSS 119 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~--~~~~f~~gvpgsFy~~ 119 (329)
+..+|+|+|||+|..+..+.+ + .+ .++..|+.......+-+.+.. .+..+..+ ++.+.
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~--------~-------~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~---d~~~~ 100 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAAS--------E-------GW--EAVLVEKDPEAVRLLKENVRRTGLGARVVAL---PVEVF 100 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHH--------T-------TC--EEEEECCCHHHHHHHHHHHHHHTCCCEEECS---CHHHH
T ss_pred CCCeEEEeCCCcCHHHHHHHH--------C-------CC--eEEEEeCCHHHHHHHHHHHHHcCCceEEEec---cHHHH
Confidence 456899999999999988864 1 22 399999987666554433221 01223433 44332
Q ss_pred c--CC--CCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHH--HHHhccCceEEEEe
Q 037735 120 L--FP--KSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTR--AQELVPGGLAALVM 193 (329)
Q Consensus 120 l--fp--~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~r--a~eL~pGG~l~~~~ 193 (329)
+ ++ ++++|+++++..+| ...+ .+++.- .+.|+|||.+++++
T Consensus 101 ~~~~~~~~~~~D~i~~~~~~~--~~~~-------------------------------~~~~~~~~~~~L~~gG~~~~~~ 147 (171)
T 1ws6_A 101 LPEAKAQGERFTVAFMAPPYA--MDLA-------------------------------ALFGELLASGLVEAGGLYVLQH 147 (171)
T ss_dssp HHHHHHTTCCEEEEEECCCTT--SCTT-------------------------------HHHHHHHHHTCEEEEEEEEEEE
T ss_pred HHhhhccCCceEEEEECCCCc--hhHH-------------------------------HHHHHHHhhcccCCCcEEEEEe
Confidence 2 11 34899999987766 2222 223333 58899999999998
Q ss_pred cccCC
Q 037735 194 FSVPD 198 (329)
Q Consensus 194 ~g~~~ 198 (329)
.....
T Consensus 148 ~~~~~ 152 (171)
T 1ws6_A 148 PKDLY 152 (171)
T ss_dssp ETTSC
T ss_pred CCccC
Confidence 77654
No 164
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.25 E-value=1.4e-06 Score=81.93 Aligned_cols=101 Identities=15% Similarity=0.144 Sum_probs=69.0
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC---CCCcceeeecccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL---PQSRSYYAAGVPGSFYS 118 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l---~~~~~~f~~gvpgsFy~ 118 (329)
+..+|+|+|||+|..+..+.... ....+|+..|+..+.....-+.+ .-...-+..+ ++.+
T Consensus 75 ~~~~VLDiGcG~G~~~~~la~~~--------------~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~---d~~~ 137 (317)
T 1dl5_A 75 KGMRVLEIGGGTGYNAAVMSRVV--------------GEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCG---DGYY 137 (317)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH--------------CTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES---CGGG
T ss_pred CcCEEEEecCCchHHHHHHHHhc--------------CCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEEC---Chhh
Confidence 45799999999999998887522 11246999999877665543332 1111234443 5644
Q ss_pred ccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEeccc
Q 037735 119 SLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSV 196 (329)
Q Consensus 119 ~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~ 196 (329)
.+.+.+++|+|++...+|++ + +...+.|+|||+|++++...
T Consensus 138 ~~~~~~~fD~Iv~~~~~~~~---~----------------------------------~~~~~~LkpgG~lvi~~~~~ 178 (317)
T 1dl5_A 138 GVPEFSPYDVIFVTVGVDEV---P----------------------------------ETWFTQLKEGGRVIVPINLK 178 (317)
T ss_dssp CCGGGCCEEEEEECSBBSCC---C----------------------------------HHHHHHEEEEEEEEEEBCBG
T ss_pred ccccCCCeEEEEEcCCHHHH---H----------------------------------HHHHHhcCCCcEEEEEECCC
Confidence 45567899999999999874 2 23356899999999996543
No 165
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.24 E-value=3.9e-06 Score=74.19 Aligned_cols=102 Identities=11% Similarity=0.119 Sum_probs=67.1
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCC-cceeeecccccccc--
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQS-RSYYAAGVPGSFYS-- 118 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~-~~~f~~gvpgsFy~-- 118 (329)
+..+|+|+|||+|..|..+.+.+ .|..+|+..|........+.+..... +-.|..+ ++..
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~--------------~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~---d~~~~~ 135 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIV--------------GWEGKIFGIEFSPRVLRELVPIVEERRNIVPILG---DATKPE 135 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHH--------------CTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEEC---CTTCGG
T ss_pred CCCEEEEEeccCCHHHHHHHHHh--------------CCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEc---cCCCcc
Confidence 45689999999999999987632 23357999999876555544333221 2234444 4433
Q ss_pred c-cCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEe
Q 037735 119 S-LFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVM 193 (329)
Q Consensus 119 ~-lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~ 193 (329)
. ..+++++|++++... .| . ....+|....+.|+|||++++.+
T Consensus 136 ~~~~~~~~~D~v~~~~~------~~-~--------------------------~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 136 EYRALVPKVDVIFEDVA------QP-T--------------------------QAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp GGTTTCCCEEEEEECCC------ST-T--------------------------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhcccCCceEEEECCC------CH-h--------------------------HHHHHHHHHHHhcCCCCEEEEEE
Confidence 1 123468999997644 11 0 11355889999999999999994
No 166
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=98.24 E-value=1e-06 Score=74.89 Aligned_cols=106 Identities=9% Similarity=-0.065 Sum_probs=67.9
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC----Ccceeeeccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ----SRSYYAAGVPGSFY 117 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~----~~~~f~~gvpgsFy 117 (329)
+..+|+|+|||+|..+..+++ .+..+|+..|+........-+.+.. .+-.+..+ ++.
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~----------------~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~---d~~ 104 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVS----------------RGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKM---DAN 104 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHH----------------TTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEES---CHH
T ss_pred CCCCEEEeCCccCHHHHHHHH----------------cCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEEC---cHH
Confidence 456999999999999988763 1224899999987666554433311 11234443 454
Q ss_pred ccc----CCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHH--HHHhccCceEEE
Q 037735 118 SSL----FPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTR--AQELVPGGLAAL 191 (329)
Q Consensus 118 ~~l----fp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~r--a~eL~pGG~l~~ 191 (329)
+.+ ++++++|+++++..+++- +...+++.. ++.|+|||++++
T Consensus 105 ~~~~~~~~~~~~fD~i~~~~~~~~~--------------------------------~~~~~~~~l~~~~~L~~gG~l~~ 152 (187)
T 2fhp_A 105 RALEQFYEEKLQFDLVLLDPPYAKQ--------------------------------EIVSQLEKMLERQLLTNEAVIVC 152 (187)
T ss_dssp HHHHHHHHTTCCEEEEEECCCGGGC--------------------------------CHHHHHHHHHHTTCEEEEEEEEE
T ss_pred HHHHHHHhcCCCCCEEEECCCCCch--------------------------------hHHHHHHHHHHhcccCCCCEEEE
Confidence 322 237899999998665431 111223333 678999999999
Q ss_pred EecccCC
Q 037735 192 VMFSVPD 198 (329)
Q Consensus 192 ~~~g~~~ 198 (329)
.+.....
T Consensus 153 ~~~~~~~ 159 (187)
T 2fhp_A 153 ETDKTVK 159 (187)
T ss_dssp EEETTCC
T ss_pred EeCCccc
Confidence 9876654
No 167
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.23 E-value=1.2e-06 Score=79.08 Aligned_cols=165 Identities=10% Similarity=-0.023 Sum_probs=86.1
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC---C-Ccceeeeccccc-c
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP---Q-SRSYYAAGVPGS-F 116 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~---~-~~~~f~~gvpgs-F 116 (329)
+..+|+|+|||+|..+..+.... |..+|+..|+...+....-+++. - .+--|..+.-.+ +
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~---------------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 129 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATL---------------NGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLL 129 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH---------------HCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSS
T ss_pred CCCEEEEeCCChhHHHHHHHHhC---------------CCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhh
Confidence 45699999999999998887522 22589999998777666544331 1 112355543222 2
Q ss_pred ccccCC---CCceeEEEeccceeccc-CCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEE
Q 037735 117 YSSLFP---KSSLHFVHSSYTLHWLS-KVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALV 192 (329)
Q Consensus 117 y~~lfp---~~s~dl~~Ss~alhWLs-~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~ 192 (329)
. ..++ ++++|+|+|+-..++.. +.+.. .++.+. . ..+...++...++.|+|||.+++.
T Consensus 130 ~-~~~~~~~~~~fD~i~~npp~~~~~~~~~~~-----------~~~~~~-~-----~~~~~~l~~~~~~~LkpgG~l~~~ 191 (254)
T 2h00_A 130 M-DALKEESEIIYDFCMCNPPFFANQLEAKGV-----------NSRNPR-R-----PPPSSVNTGGITEIMAEGGELEFV 191 (254)
T ss_dssp T-TTSTTCCSCCBSEEEECCCCC------------------------------------------CTTTTHHHHTHHHHH
T ss_pred h-hhhhcccCCcccEEEECCCCccCcchhccc-----------cccccc-c-----cCCHHHHhhhHHHHEecCCEEEEE
Confidence 1 1244 36899999997777643 11100 000000 0 012235567778889999987654
Q ss_pred ecccCCCCcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEe
Q 037735 193 MFSVPDGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKM 258 (329)
Q Consensus 193 ~~g~~~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~ 258 (329)
. ..+..+.+-+...|.+..+.-..++.+++.+.+++.| |+..+...+
T Consensus 192 ~------------------~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~G-f~~v~~~~~ 238 (254)
T 2h00_A 192 K------------------RIIHDSLQLKKRLRWYSCMLGKKCSLAPLKEELRIQG-VPKVTYTEF 238 (254)
T ss_dssp H------------------HHHHHHHHHGGGBSCEEEEESSTTSHHHHHHHHHHTT-CSEEEEEEE
T ss_pred H------------------HHHHHHHhcccceEEEEECCCChhHHHHHHHHHHHcC-CCceEEEEE
Confidence 2 1222232323333432211123355689999999885 876555433
No 168
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.22 E-value=4.1e-06 Score=75.04 Aligned_cols=100 Identities=11% Similarity=0.103 Sum_probs=69.4
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC----CCCcceeeeccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL----PQSRSYYAAGVPGSFY 117 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l----~~~~~~f~~gvpgsFy 117 (329)
+..+|+|+|||+|.++..+...+ .|..+++..|+.......+-+.+ ...+-.+.. +++.
T Consensus 96 ~~~~vLdiG~G~G~~~~~l~~~~--------------~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~---~d~~ 158 (258)
T 2pwy_A 96 PGMRVLEAGTGSGGLTLFLARAV--------------GEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHL---GKLE 158 (258)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH--------------CTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEE---SCGG
T ss_pred CCCEEEEECCCcCHHHHHHHHHh--------------CCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEE---Cchh
Confidence 45699999999999999887632 23458999999776655544332 211222343 3564
Q ss_pred cccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEec
Q 037735 118 SSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMF 194 (329)
Q Consensus 118 ~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~ 194 (329)
+..+|++++|++++. +|.. ..+|+...+.|+|||.+++...
T Consensus 159 ~~~~~~~~~D~v~~~--------~~~~----------------------------~~~l~~~~~~L~~gG~l~~~~~ 199 (258)
T 2pwy_A 159 EAELEEAAYDGVALD--------LMEP----------------------------WKVLEKAALALKPDRFLVAYLP 199 (258)
T ss_dssp GCCCCTTCEEEEEEE--------SSCG----------------------------GGGHHHHHHHEEEEEEEEEEES
T ss_pred hcCCCCCCcCEEEEC--------CcCH----------------------------HHHHHHHHHhCCCCCEEEEEeC
Confidence 444788899999973 2311 2568999999999999999874
No 169
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.22 E-value=1.2e-06 Score=77.45 Aligned_cols=104 Identities=13% Similarity=0.044 Sum_probs=69.3
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC--------CCcceeeeccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP--------QSRSYYAAGVP 113 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~--------~~~~~f~~gvp 113 (329)
+..+|+|+|||+|..+..+.... ... ..|..+|+..|.........-+.+. ..+..+..+
T Consensus 80 ~~~~VLdiG~G~G~~~~~la~~~--------~~~--~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~-- 147 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMAIKM--------NVL--ENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHK-- 147 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHT--------TTT--TCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEEC--
T ss_pred CCCEEEEECCCCCHHHHHHHHHh--------ccc--CCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEEC--
Confidence 35799999999999998886521 100 0144689999998766555433321 112234443
Q ss_pred ccccccc----CCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceE
Q 037735 114 GSFYSSL----FPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLA 189 (329)
Q Consensus 114 gsFy~~l----fp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l 189 (329)
++.+-+ ++.+++|+|++..+++++ + +...+.|+|||+|
T Consensus 148 -d~~~~~~~~~~~~~~fD~I~~~~~~~~~---~----------------------------------~~~~~~LkpgG~l 189 (227)
T 2pbf_A 148 -NIYQVNEEEKKELGLFDAIHVGASASEL---P----------------------------------EILVDLLAENGKL 189 (227)
T ss_dssp -CGGGCCHHHHHHHCCEEEEEECSBBSSC---C----------------------------------HHHHHHEEEEEEE
T ss_pred -ChHhcccccCccCCCcCEEEECCchHHH---H----------------------------------HHHHHhcCCCcEE
Confidence 454433 556789999999998863 2 4456889999999
Q ss_pred EEEecc
Q 037735 190 ALVMFS 195 (329)
Q Consensus 190 ~~~~~g 195 (329)
++.+..
T Consensus 190 v~~~~~ 195 (227)
T 2pbf_A 190 IIPIEE 195 (227)
T ss_dssp EEEEEE
T ss_pred EEEEcc
Confidence 999864
No 170
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.21 E-value=1.5e-06 Score=76.75 Aligned_cols=123 Identities=12% Similarity=0.011 Sum_probs=72.8
Q ss_pred CCceEEEeeeCC-CCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC--Ccceeeeccccccc
Q 037735 41 PNTFRIADFGCS-TGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ--SRSYYAAGVPGSFY 117 (329)
Q Consensus 41 ~~~~~IaDlGCs-tG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~--~~~~f~~gvpgsFy 117 (329)
.+..+|+|+||| +|..+..+.... ..+|+..|+........-+++.. .+--+..+ ++.
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~----------------~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~---d~~ 114 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFF----------------NCKVTATEVDEEFFEYARRNIERNNSNVRLVKS---NGG 114 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHH----------------CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEEC---SSC
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhc----------------CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeC---Cch
Confidence 345799999999 999999886521 15899999987766655443311 12234444 321
Q ss_pred -cccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEec
Q 037735 118 -SSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMF 194 (329)
Q Consensus 118 -~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~ 194 (329)
-.-+|++++|+|+++-.++|..+....+ +..-+... . ....+...||+...+-|+|||++++.+.
T Consensus 115 ~~~~~~~~~fD~I~~npp~~~~~~~~~~~--~~~~~~~~-~---------~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 180 (230)
T 3evz_A 115 IIKGVVEGTFDVIFSAPPYYDKPLGRVLT--EREAIGGG-K---------YGEEFSVKLLEEAFDHLNPGGKVALYLP 180 (230)
T ss_dssp SSTTTCCSCEEEEEECCCCC-----------------CC-S---------SSCHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred hhhhcccCceeEEEECCCCcCCccccccC--hhhhhccC-c---------cchHHHHHHHHHHHHHhCCCeEEEEEec
Confidence 1225678999999998888765421100 00000000 0 0012346789999999999999999864
No 171
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.20 E-value=1.6e-06 Score=77.46 Aligned_cols=98 Identities=15% Similarity=0.131 Sum_probs=65.7
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC---CCCcceeeecccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL---PQSRSYYAAGVPGSFYS 118 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l---~~~~~~f~~gvpgsFy~ 118 (329)
+..+|+|+|||+|.++..+.+.. + .+|+..|.........-+.+ .-....+..+ ++ .
T Consensus 91 ~~~~vLdiG~G~G~~~~~la~~~---------------~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~---d~-~ 150 (235)
T 1jg1_A 91 PGMNILEVGTGSGWNAALISEIV---------------K-TDVYTIERIPELVEFAKRNLERAGVKNVHVILG---DG-S 150 (235)
T ss_dssp TTCCEEEECCTTSHHHHHHHHHH---------------C-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEES---CG-G
T ss_pred CCCEEEEEeCCcCHHHHHHHHHh---------------C-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEC---Cc-c
Confidence 45689999999999999887522 2 47899998766555443332 1111223443 45 3
Q ss_pred ccCCCCc-eeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEeccc
Q 037735 119 SLFPKSS-LHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSV 196 (329)
Q Consensus 119 ~lfp~~s-~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~ 196 (329)
.-+|+++ +|+|+++.+++++ + ....+.|+|||+|++++...
T Consensus 151 ~~~~~~~~fD~Ii~~~~~~~~---~----------------------------------~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 151 KGFPPKAPYDVIIVTAGAPKI---P----------------------------------EPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp GCCGGGCCEEEEEECSBBSSC---C----------------------------------HHHHHTEEEEEEEEEEECSS
T ss_pred cCCCCCCCccEEEECCcHHHH---H----------------------------------HHHHHhcCCCcEEEEEEecC
Confidence 3355544 9999999998874 2 13457899999999998643
No 172
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.20 E-value=2.4e-06 Score=78.33 Aligned_cols=122 Identities=12% Similarity=0.096 Sum_probs=75.6
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC---CCCcceeeecccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL---PQSRSYYAAGVPGSFYS 118 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l---~~~~~~f~~gvpgsFy~ 118 (329)
+..+|+|+|||+|..+..+.. . .|..+++..|.........-++. ...+-.|..+ ++.+
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~--------~-------~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~---d~~~ 170 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALAS--------E-------RPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQS---DWFS 170 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHH--------H-------CTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECC---STTG
T ss_pred CCCEEEEecCCccHHHHHHHH--------h-------CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEc---chhh
Confidence 356899999999999988864 2 24468999999876655543332 1112234443 5544
Q ss_pred ccCCCCceeEEEeccceecccCC---CCC-CCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEE
Q 037735 119 SLFPKSSLHFVHSSYTLHWLSKV---PKV-DGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALV 192 (329)
Q Consensus 119 ~lfp~~s~dl~~Ss~alhWLs~~---p~~-~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~ 192 (329)
.+|++++|+|+|+-..+|.... +.. .+.+..-.. .. ...-.++..+++...+-|+|||++++.
T Consensus 171 -~~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~--~~--------~~g~~~~~~~l~~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 171 -ALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALV--AA--------DSGMADIVHIIEQSRNALVSGGFLLLE 237 (276)
T ss_dssp -GGTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTB--CH--------HHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred -hcccCCccEEEECCCCCCccccccChhhhhcCcHHHHc--CC--------CcHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 4567899999999777765430 000 000000000 00 011235578899999999999999986
No 173
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.19 E-value=3.6e-07 Score=80.93 Aligned_cols=108 Identities=9% Similarity=-0.011 Sum_probs=68.3
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC---CC-Ccceeeeccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL---PQ-SRSYYAAGVPGSFY 117 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l---~~-~~~~f~~gvpgsFy 117 (329)
++.+|+|+|||+|..|..+...+ .+..+|+..|+........-+.+ .- .+--+..|....+.
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~--------------~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l 123 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLL--------------QPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLI 123 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTS--------------CTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHG
T ss_pred CCCEEEEECCCCCHHHHHHHHhC--------------CCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHH
Confidence 45799999999999999887411 23468999999876665544332 11 12234554322222
Q ss_pred cccC---CCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEec
Q 037735 118 SSLF---PKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMF 194 (329)
Q Consensus 118 ~~lf---p~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~ 194 (329)
..+- +.+++|+|++....++.. +...++... +-|+|||+|++...
T Consensus 124 ~~~~~~~~~~~fD~V~~d~~~~~~~-------------------------------~~~~~~~~~-~~LkpgG~lv~~~~ 171 (221)
T 3u81_A 124 PQLKKKYDVDTLDMVFLDHWKDRYL-------------------------------PDTLLLEKC-GLLRKGTVLLADNV 171 (221)
T ss_dssp GGTTTTSCCCCCSEEEECSCGGGHH-------------------------------HHHHHHHHT-TCCCTTCEEEESCC
T ss_pred HHHHHhcCCCceEEEEEcCCcccch-------------------------------HHHHHHHhc-cccCCCeEEEEeCC
Confidence 2221 127899999876655532 223556666 99999999988543
Q ss_pred c
Q 037735 195 S 195 (329)
Q Consensus 195 g 195 (329)
.
T Consensus 172 ~ 172 (221)
T 3u81_A 172 I 172 (221)
T ss_dssp C
T ss_pred C
Confidence 3
No 174
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.19 E-value=3.9e-06 Score=74.04 Aligned_cols=100 Identities=16% Similarity=0.123 Sum_probs=67.7
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC--------Ccceeeeccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ--------SRSYYAAGVP 113 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~--------~~~~f~~gvp 113 (329)
+..+|+|+|||+|..|..+.... .+..+|+..|+........-+.+.. .+..+..+
T Consensus 77 ~~~~vLDiG~G~G~~~~~la~~~--------------~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~-- 140 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFARMV--------------GCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVG-- 140 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH--------------CTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEES--
T ss_pred CCCEEEEEcCCcCHHHHHHHHHh--------------CCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEEC--
Confidence 45799999999999999887522 2335899999987665554333211 12234443
Q ss_pred cccccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEe
Q 037735 114 GSFYSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVM 193 (329)
Q Consensus 114 gsFy~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~ 193 (329)
+......+++++|+|++...++. + +...++.|+|||+|++++
T Consensus 141 -d~~~~~~~~~~fD~i~~~~~~~~---~----------------------------------~~~~~~~LkpgG~lv~~~ 182 (226)
T 1i1n_A 141 -DGRMGYAEEAPYDAIHVGAAAPV---V----------------------------------PQALIDQLKPGGRLILPV 182 (226)
T ss_dssp -CGGGCCGGGCCEEEEEECSBBSS---C----------------------------------CHHHHHTEEEEEEEEEEE
T ss_pred -CcccCcccCCCcCEEEECCchHH---H----------------------------------HHHHHHhcCCCcEEEEEE
Confidence 44333345778999998887754 2 345678899999999987
Q ss_pred cc
Q 037735 194 FS 195 (329)
Q Consensus 194 ~g 195 (329)
..
T Consensus 183 ~~ 184 (226)
T 1i1n_A 183 GP 184 (226)
T ss_dssp SC
T ss_pred ec
Confidence 54
No 175
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.18 E-value=3.6e-06 Score=73.76 Aligned_cols=104 Identities=12% Similarity=-0.011 Sum_probs=67.6
Q ss_pred ceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC---Ccceeeeccccccccc
Q 037735 43 TFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ---SRSYYAAGVPGSFYSS 119 (329)
Q Consensus 43 ~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~---~~~~f~~gvpgsFy~~ 119 (329)
..+|+|+|||+|..++.++. + .. .+|+..|+...+...+-+++.. .+--|..+ ++.+-
T Consensus 55 ~~~vLDlgcG~G~~~~~l~~--------~-------~~-~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~---D~~~~ 115 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEALS--------R-------YA-AGATLIEMDRAVSQQLIKNLATLKAGNARVVNS---NAMSF 115 (202)
T ss_dssp TCEEEETTCTTCHHHHHHHH--------T-------TC-SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECS---CHHHH
T ss_pred CCeEEEeCCCcCHHHHHHHh--------c-------CC-CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEEC---CHHHH
Confidence 46899999999999987764 1 11 2799999988777665444321 12234444 45442
Q ss_pred c-CCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHH--HHhccCceEEEEeccc
Q 037735 120 L-FPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRA--QELVPGGLAALVMFSV 196 (329)
Q Consensus 120 l-fp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra--~eL~pGG~l~~~~~g~ 196 (329)
+ .+++++|+|++...+|+ . +...+++... +.|+|||++++++...
T Consensus 116 ~~~~~~~fD~V~~~~p~~~----~----------------------------~~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 116 LAQKGTPHNIVFVDPPFRR----G----------------------------LLEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp HSSCCCCEEEEEECCSSST----T----------------------------THHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred HhhcCCCCCEEEECCCCCC----C----------------------------cHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 3 35679999998766553 1 1123344443 3599999999988654
Q ss_pred C
Q 037735 197 P 197 (329)
Q Consensus 197 ~ 197 (329)
.
T Consensus 164 ~ 164 (202)
T 2fpo_A 164 N 164 (202)
T ss_dssp G
T ss_pred c
Confidence 3
No 176
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.17 E-value=8e-06 Score=75.38 Aligned_cols=126 Identities=9% Similarity=0.025 Sum_probs=84.9
Q ss_pred ceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC--C-Cc-ceeeecccccccc
Q 037735 43 TFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP--Q-SR-SYYAAGVPGSFYS 118 (329)
Q Consensus 43 ~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~--~-~~-~~f~~gvpgsFy~ 118 (329)
..+|+|+|||+|..|+.+.. . .+. +|+..|+.......+-+++. . .. --|..| ++.+
T Consensus 126 ~~~VLDlgcG~G~~~~~la~--------~-------~~~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~---D~~~ 186 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPIAV--------Y-------GKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNM---DNRD 186 (278)
T ss_dssp TCEEEETTCTTTTTHHHHHH--------H-------TCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS---CTTT
T ss_pred CCEEEEecccCCHHHHHHHH--------h-------CCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEEC---CHHH
Confidence 47899999999999998875 2 122 69999998777666544321 1 11 225554 4533
Q ss_pred ccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCC
Q 037735 119 SLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPD 198 (329)
Q Consensus 119 ~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~ 198 (329)
+.+++++|++++. +|.. ...||....+.|+|||++++..+++..
T Consensus 187 -~~~~~~fD~Vi~~--------~p~~---------------------------~~~~l~~~~~~LkpgG~l~~~~~~~~~ 230 (278)
T 2frn_A 187 -FPGENIADRILMG--------YVVR---------------------------THEFIPKALSIAKDGAIIHYHNTVPEK 230 (278)
T ss_dssp -CCCCSCEEEEEEC--------CCSS---------------------------GGGGHHHHHHHEEEEEEEEEEEEEEGG
T ss_pred -hcccCCccEEEEC--------Cchh---------------------------HHHHHHHHHHHCCCCeEEEEEEeeccc
Confidence 3347899999883 3321 135688888999999999999987542
Q ss_pred CCcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEE
Q 037735 199 GIPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERME 256 (329)
Q Consensus 199 ~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e 256 (329)
. ..-...+++.+.+++.| |++..++
T Consensus 231 ~--------------------------------~~~~~~~~i~~~~~~~G-~~~~~~~ 255 (278)
T 2frn_A 231 L--------------------------------MPREPFETFKRITKEYG-YDVEKLN 255 (278)
T ss_dssp G--------------------------------TTTTTHHHHHHHHHHTT-CEEEEEE
T ss_pred c--------------------------------ccccHHHHHHHHHHHcC-CeeEEee
Confidence 1 11244677788888774 7776643
No 177
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.17 E-value=1.2e-06 Score=79.37 Aligned_cols=106 Identities=14% Similarity=0.077 Sum_probs=69.2
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC---CCC-cceeeeccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL---PQS-RSYYAAGVPGSFY 117 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l---~~~-~~~f~~gvpgsFy 117 (329)
++.+|+|+|||+|..|..+.. .+ ++..+|+..|+........-+.+ .-. +--+..|....+.
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~--------~~------~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l 128 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMAR--------EL------PADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSL 128 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHT--------TS------CTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHH
T ss_pred CCCEEEEecCCchHHHHHHHH--------hC------CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH
Confidence 457999999999999998874 21 22468999999876665543332 211 2235554322222
Q ss_pred cccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecc
Q 037735 118 SSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFS 195 (329)
Q Consensus 118 ~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g 195 (329)
..+...+++|+|++... . .+...+|+...+-|+|||+|++...-
T Consensus 129 ~~~~~~~~fD~V~~d~~---~-------------------------------~~~~~~l~~~~~~LkpGG~lv~~~~~ 172 (248)
T 3tfw_A 129 ESLGECPAFDLIFIDAD---K-------------------------------PNNPHYLRWALRYSRPGTLIIGDNVV 172 (248)
T ss_dssp HTCCSCCCCSEEEECSC---G-------------------------------GGHHHHHHHHHHTCCTTCEEEEECCS
T ss_pred HhcCCCCCeEEEEECCc---h-------------------------------HHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 23323458999998542 1 13346789999999999999987653
No 178
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.16 E-value=3.9e-06 Score=79.04 Aligned_cols=125 Identities=14% Similarity=0.062 Sum_probs=73.8
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC---CCcceeeecccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP---QSRSYYAAGVPGSFYS 118 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~---~~~~~f~~gvpgsFy~ 118 (329)
+..+|+|+|||+|..|..+.+.. .+..+|+.+|+.......+-+++. -..-.++.+ ++..
T Consensus 118 ~g~~VLDlg~G~G~~t~~la~~~--------------~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~---D~~~ 180 (315)
T 1ixk_A 118 PGEIVADMAAAPGGKTSYLAQLM--------------RNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHS---SSLH 180 (315)
T ss_dssp TTCEEEECCSSCSHHHHHHHHHT--------------TTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESS---CGGG
T ss_pred CCCEEEEeCCCCCHHHHHHHHHh--------------CCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEEC---Chhh
Confidence 34689999999999999987522 223589999998877766655432 112234444 4432
Q ss_pred ccCCCCceeEEEec---cceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecc
Q 037735 119 SLFPKSSLHFVHSS---YTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFS 195 (329)
Q Consensus 119 ~lfp~~s~dl~~Ss---~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g 195 (329)
-..+++++|+|++. +.+.-+.+.|.. ....++..+.+ ..+.-..+|+.-++-|+|||+|++++..
T Consensus 181 ~~~~~~~fD~Il~d~Pcsg~g~~~~~p~~-------~~~~~~~~~~~-----~~~~q~~~L~~~~~~LkpGG~lv~stcs 248 (315)
T 1ixk_A 181 IGELNVEFDKILLDAPCTGSGTIHKNPER-------KWNRTMDDIKF-----CQGLQMRLLEKGLEVLKPGGILVYSTCS 248 (315)
T ss_dssp GGGGCCCEEEEEEECCTTSTTTCC---------------CCHHHHHH-----HHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cccccccCCEEEEeCCCCCcccccCChhH-------hhcCCHHHHHH-----HHHHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 22346789999973 112111122211 00111122211 2223358899999999999999998864
No 179
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.15 E-value=4.3e-06 Score=73.08 Aligned_cols=108 Identities=12% Similarity=0.037 Sum_probs=66.4
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeecccccccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSSL 120 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~l 120 (329)
.+..+|+|+|||+|..|..+.+ + ..+|+..|+.... .++ .-.|+.| ++.+..
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~--------~---------~~~V~gvD~~~~~------~~~--~v~~~~~---D~~~~~ 75 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNS--------L---------ARKIISIDLQEME------EIA--GVRFIRC---DIFKET 75 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTT--------T---------CSEEEEEESSCCC------CCT--TCEEEEC---CTTSSS
T ss_pred CCCCEEEEEeecCCHHHHHHHH--------c---------CCcEEEEeccccc------cCC--CeEEEEc---cccCHH
Confidence 3457999999999999988864 1 2479999986531 111 2234443 453321
Q ss_pred --------CC---CCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceE
Q 037735 121 --------FP---KSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLA 189 (329)
Q Consensus 121 --------fp---~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l 189 (329)
++ .+++|+|+|..+..+.-. ... ..+ .........|+.-.+.|+|||.|
T Consensus 76 ~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~-----------------~~~-d~~--~~~~l~~~~l~~a~~~LkpGG~l 135 (191)
T 3dou_A 76 IFDDIDRALREEGIEKVDDVVSDAMAKVSGI-----------------PSR-DHA--VSYQIGQRVMEIAVRYLRNGGNV 135 (191)
T ss_dssp HHHHHHHHHHHHTCSSEEEEEECCCCCCCSC-----------------HHH-HHH--HHHHHHHHHHHHHHHHEEEEEEE
T ss_pred HHHHHHHHhhcccCCcceEEecCCCcCCCCC-----------------ccc-CHH--HHHHHHHHHHHHHHHHccCCCEE
Confidence 22 148999999865433110 000 000 11123457788889999999999
Q ss_pred EEEeccc
Q 037735 190 ALVMFSV 196 (329)
Q Consensus 190 ~~~~~g~ 196 (329)
++.++..
T Consensus 136 v~k~~~~ 142 (191)
T 3dou_A 136 LLKQFQG 142 (191)
T ss_dssp EEEEECS
T ss_pred EEEEcCC
Confidence 9988743
No 180
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.15 E-value=1.8e-07 Score=83.63 Aligned_cols=100 Identities=14% Similarity=0.065 Sum_probs=69.7
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC---C-Ccceeeeccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP---Q-SRSYYAAGVPGSFY 117 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~---~-~~~~f~~gvpgsFy 117 (329)
+..+|+|+|||+|.++..+.+ . ..+|+..|+.......+-+.+. - .+--|..+ ++.
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~--------~---------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~---d~~ 137 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFAL--------T---------GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICG---DFL 137 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHH--------T---------TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES---CHH
T ss_pred CCCEEEECccccCHHHHHHHH--------c---------CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEEC---ChH
Confidence 457999999999999999875 1 1589999998877666544331 1 12234544 564
Q ss_pred cccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEe
Q 037735 118 SSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVM 193 (329)
Q Consensus 118 ~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~ 193 (329)
+ +.+++++|+|+++..+||....... +...++.|+|||++++..
T Consensus 138 ~-~~~~~~~D~v~~~~~~~~~~~~~~~-------------------------------~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 138 L-LASFLKADVVFLSPPWGGPDYATAE-------------------------------TFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp H-HGGGCCCSEEEECCCCSSGGGGGSS-------------------------------SBCTTTSCSSCHHHHHHH
T ss_pred H-hcccCCCCEEEECCCcCCcchhhhH-------------------------------HHHHHhhcCCcceeHHHH
Confidence 3 3478899999999999997765422 344456789999866554
No 181
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.14 E-value=2.8e-06 Score=83.51 Aligned_cols=107 Identities=12% Similarity=0.096 Sum_probs=70.6
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhh----------c--CCCCccee
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFK----------S--LPQSRSYY 108 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~----------~--l~~~~~~f 108 (329)
.+..+|+|+|||+|..++.+.. . .+.-+++.-|+..+.....-+ . +...+--|
T Consensus 172 ~~gd~VLDLGCGtG~l~l~lA~--------~-------~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVef 236 (438)
T 3uwp_A 172 TDDDLFVDLGSGVGQVVLQVAA--------A-------TNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTL 236 (438)
T ss_dssp CTTCEEEEESCTTSHHHHHHHH--------H-------CCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHH--------H-------CCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEE
Confidence 3457899999999999988864 1 122259999998654332211 1 11112335
Q ss_pred eeccccccccccCCC--CceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccC
Q 037735 109 AAGVPGSFYSSLFPK--SSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPG 186 (329)
Q Consensus 109 ~~gvpgsFy~~lfp~--~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pG 186 (329)
+.| +|.+..++. .++|+|+++..++| | |...-|....+.|+||
T Consensus 237 i~G---D~~~lp~~d~~~~aDVVf~Nn~~F~----p----------------------------dl~~aL~Ei~RvLKPG 281 (438)
T 3uwp_A 237 ERG---DFLSEEWRERIANTSVIFVNNFAFG----P----------------------------EVDHQLKERFANMKEG 281 (438)
T ss_dssp EEC---CTTSHHHHHHHHTCSEEEECCTTCC----H----------------------------HHHHHHHHHHTTSCTT
T ss_pred EEC---cccCCccccccCCccEEEEcccccC----c----------------------------hHHHHHHHHHHcCCCC
Confidence 554 676655544 47999999888765 2 3445678889999999
Q ss_pred ceEEEE-ecccC
Q 037735 187 GLAALV-MFSVP 197 (329)
Q Consensus 187 G~l~~~-~~g~~ 197 (329)
|+++++ .+.++
T Consensus 282 GrIVssE~f~p~ 293 (438)
T 3uwp_A 282 GRIVSSKPFAPL 293 (438)
T ss_dssp CEEEESSCSSCT
T ss_pred cEEEEeecccCC
Confidence 999987 33443
No 182
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.14 E-value=1.7e-06 Score=76.97 Aligned_cols=101 Identities=15% Similarity=0.148 Sum_probs=67.8
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC---CC-Ccceeeeccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL---PQ-SRSYYAAGVPGSFY 117 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l---~~-~~~~f~~gvpgsFy 117 (329)
+..+|+|+|||+|..+..+.. . .|..+|+..|.........-+.+ .. .+--+..+ ++.
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~--------~-------~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~---d~~ 115 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQ--------A-------LPEATIVSIERDERRYEEAHKHVKALGLESRIELLFG---DAL 115 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHH--------H-------CTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS---CGG
T ss_pred CCCEEEEecCCCcHHHHHHHH--------H-------CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC---CHH
Confidence 346999999999999998875 2 12368999999876655543332 11 11234443 443
Q ss_pred ccc---CCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEec
Q 037735 118 SSL---FPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMF 194 (329)
Q Consensus 118 ~~l---fp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~ 194 (329)
+.+ ..++++|+|++....+ ++..+|+...+.|+|||++++..+
T Consensus 116 ~~~~~~~~~~~fD~I~~~~~~~----------------------------------~~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 116 QLGEKLELYPLFDVLFIDAAKG----------------------------------QYRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp GSHHHHTTSCCEEEEEEEGGGS----------------------------------CHHHHHHHHGGGEEEEEEEEEETT
T ss_pred HHHHhcccCCCccEEEECCCHH----------------------------------HHHHHHHHHHHHcCCCeEEEEEcC
Confidence 322 1267899999865422 345789999999999999999754
No 183
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.13 E-value=4e-06 Score=79.59 Aligned_cols=113 Identities=12% Similarity=0.025 Sum_probs=77.0
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC---Ccceeeeccccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ---SRSYYAAGVPGSFY 117 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~---~~~~f~~gvpgsFy 117 (329)
+++.+|||+|||+|..+..+.+ + .|..++...|+-.......-+.++. .+--++.|....|.
T Consensus 88 p~~~rVLdIG~G~G~la~~la~--------~-------~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l 152 (317)
T 3gjy_A 88 ASKLRITHLGGGACTMARYFAD--------V-------YPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVA 152 (317)
T ss_dssp GGGCEEEEESCGGGHHHHHHHH--------H-------STTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHH
T ss_pred CCCCEEEEEECCcCHHHHHHHH--------H-------CCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHH
Confidence 3456999999999998888874 2 2446889999987666554444431 22345565544442
Q ss_pred cccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEeccc
Q 037735 118 SSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSV 196 (329)
Q Consensus 118 ~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~ 196 (329)
.. ++++++|+|++....+|- .|.. -.-..|++..++.|+|||+|++.+...
T Consensus 153 ~~-~~~~~fDvIi~D~~~~~~--~~~~-------------------------L~t~efl~~~~r~LkpgGvlv~~~~~~ 203 (317)
T 3gjy_A 153 ES-FTPASRDVIIRDVFAGAI--TPQN-------------------------FTTVEFFEHCHRGLAPGGLYVANCGDH 203 (317)
T ss_dssp HT-CCTTCEEEEEECCSTTSC--CCGG-------------------------GSBHHHHHHHHHHEEEEEEEEEEEEEC
T ss_pred hh-ccCCCCCEEEECCCCccc--cchh-------------------------hhHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 22 467899999998776662 2211 011478999999999999999998643
No 184
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.13 E-value=1.8e-06 Score=77.24 Aligned_cols=100 Identities=12% Similarity=0.105 Sum_probs=67.9
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC---CCC-cceeeeccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL---PQS-RSYYAAGVPGSFY 117 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l---~~~-~~~f~~gvpgsFy 117 (329)
+..+|+|+|||+|..|..+.. . .|..+|+..|+........-+.+ .-. +--|..| ++.
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~--------~-------~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~---d~~ 132 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFAS--------I-------SDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEG---NAL 132 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHT--------T-------CTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEES---CGG
T ss_pred CCCEEEEEeCchhHHHHHHHH--------h-------CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC---CHH
Confidence 457999999999999988863 1 24468999999876655543332 211 2335554 453
Q ss_pred cccCC---CCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEec
Q 037735 118 SSLFP---KSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMF 194 (329)
Q Consensus 118 ~~lfp---~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~ 194 (329)
+. .| ++++|+|++.. |.. ++..||+...+-|+|||+|++...
T Consensus 133 ~~-~~~~~~~~fD~V~~~~---~~~-------------------------------~~~~~l~~~~~~LkpgG~lv~d~~ 177 (232)
T 3ntv_A 133 EQ-FENVNDKVYDMIFIDA---AKA-------------------------------QSKKFFEIYTPLLKHQGLVITDNV 177 (232)
T ss_dssp GC-HHHHTTSCEEEEEEET---TSS-------------------------------SHHHHHHHHGGGEEEEEEEEEECT
T ss_pred HH-HHhhccCCccEEEEcC---cHH-------------------------------HHHHHHHHHHHhcCCCeEEEEeeC
Confidence 32 33 78999999652 211 344789999999999999988443
No 185
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.12 E-value=3.5e-06 Score=79.02 Aligned_cols=106 Identities=15% Similarity=0.129 Sum_probs=69.1
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC-------CCcceeeeccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP-------QSRSYYAAGVP 113 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~-------~~~~~f~~gvp 113 (329)
+++.+|||+|||+|..+..+++ . .+..+|+..|+........-+.++ ..+--++.+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~--------~-------~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~-- 156 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLR--------H-------GTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVG-- 156 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHT--------C-------TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEES--
T ss_pred CCCCeEEEEcCCCCHHHHHHHh--------C-------CCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEEC--
Confidence 4568999999999999988863 1 233589999998665554433331 112234444
Q ss_pred cccccccC--CCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcH--HHHHHHHHHHhccCceE
Q 037735 114 GSFYSSLF--PKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDF--QTFLNTRAQELVPGGLA 189 (329)
Q Consensus 114 gsFy~~lf--p~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~--~~FL~~ra~eL~pGG~l 189 (329)
++.+-+. +++++|+|++....++. |.. .+ ..||+..++.|+|||+|
T Consensus 157 -D~~~~~~~~~~~~fDvIi~d~~~~~~---~~~--------------------------~l~~~~~l~~~~~~LkpgG~l 206 (304)
T 3bwc_A 157 -DGLAFVRQTPDNTYDVVIIDTTDPAG---PAS--------------------------KLFGEAFYKDVLRILKPDGIC 206 (304)
T ss_dssp -CHHHHHHSSCTTCEEEEEEECC--------------------------------------CCHHHHHHHHHHEEEEEEE
T ss_pred -cHHHHHHhccCCceeEEEECCCCccc---cch--------------------------hhhHHHHHHHHHHhcCCCcEE
Confidence 4433333 68899999998777652 211 11 37899999999999999
Q ss_pred EEEe
Q 037735 190 ALVM 193 (329)
Q Consensus 190 ~~~~ 193 (329)
++..
T Consensus 207 v~~~ 210 (304)
T 3bwc_A 207 CNQG 210 (304)
T ss_dssp EEEE
T ss_pred EEec
Confidence 9985
No 186
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.11 E-value=3.5e-06 Score=76.00 Aligned_cols=102 Identities=12% Similarity=0.049 Sum_probs=65.1
Q ss_pred ceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeeccccccccc--c
Q 037735 43 TFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSS--L 120 (329)
Q Consensus 43 ~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~--l 120 (329)
+.+|+|+|||+|..|..+.+.+ + .. .|..+|+..|+...+....- .+. .+--|+.| +..+- +
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~----~-~~------~~~~~V~gvD~s~~~l~~a~-~~~-~~v~~~~g---D~~~~~~l 145 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLT----K-IM------GIDCQVIGIDRDLSRCQIPA-SDM-ENITLHQG---DCSDLTTF 145 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHH----H-HT------TCCCEEEEEESCCTTCCCCG-GGC-TTEEEEEC---CSSCSGGG
T ss_pred CCEEEEEeCCCCHHHHHHHHhh----h-hc------CCCCEEEEEeCChHHHHHHh-ccC-CceEEEEC---cchhHHHH
Confidence 4699999999999999887532 0 01 23468999999765533221 221 12335554 34331 1
Q ss_pred --CCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHH-HhccCceEEEEec
Q 037735 121 --FPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQ-ELVPGGLAALVMF 194 (329)
Q Consensus 121 --fp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~-eL~pGG~l~~~~~ 194 (329)
++..++|+|++..+ | . +...+|...++ .|+|||+|++..+
T Consensus 146 ~~~~~~~fD~I~~d~~-~--~-------------------------------~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 146 EHLREMAHPLIFIDNA-H--A-------------------------------NTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp GGGSSSCSSEEEEESS-C--S-------------------------------SHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred HhhccCCCCEEEECCc-h--H-------------------------------hHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 23347999987654 3 1 23467888886 9999999999754
No 187
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.11 E-value=2e-06 Score=81.11 Aligned_cols=114 Identities=12% Similarity=0.120 Sum_probs=74.7
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC--------CCcceeeecc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP--------QSRSYYAAGV 112 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~--------~~~~~f~~gv 112 (329)
+++.+|||+|||+|..+..+.+ + .+..+++..|+........-+.++ ..+--+..|.
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~--------~-------~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D 140 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLK--------H-------PTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDD 140 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTT--------S-------TTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESC
T ss_pred CCCCeEEEEcCCcCHHHHHHHh--------c-------CCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEch
Confidence 4568999999999999888863 1 233589999998765554433332 1223345554
Q ss_pred ccccccccCCCCceeEEEeccceec-ccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEE
Q 037735 113 PGSFYSSLFPKSSLHFVHSSYTLHW-LSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAAL 191 (329)
Q Consensus 113 pgsFy~~lfp~~s~dl~~Ss~alhW-Ls~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~ 191 (329)
...+.. .+++++|+|++....|| ++..+.. -....|++..++.|+|||+|++
T Consensus 141 ~~~~l~--~~~~~fD~Ii~d~~~~~~~~~~~~~-------------------------l~~~~~l~~~~~~LkpgG~lv~ 193 (314)
T 1uir_A 141 ARAYLE--RTEERYDVVIIDLTDPVGEDNPARL-------------------------LYTVEFYRLVKAHLNPGGVMGM 193 (314)
T ss_dssp HHHHHH--HCCCCEEEEEEECCCCBSTTCGGGG-------------------------GSSHHHHHHHHHTEEEEEEEEE
T ss_pred HHHHHH--hcCCCccEEEECCCCcccccCcchh-------------------------ccHHHHHHHHHHhcCCCcEEEE
Confidence 333311 25789999999988887 2211100 0124789999999999999999
Q ss_pred Eeccc
Q 037735 192 VMFSV 196 (329)
Q Consensus 192 ~~~g~ 196 (329)
....+
T Consensus 194 ~~~~~ 198 (314)
T 1uir_A 194 QTGMI 198 (314)
T ss_dssp EEEEE
T ss_pred EccCc
Confidence 86443
No 188
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.11 E-value=4.8e-06 Score=77.30 Aligned_cols=107 Identities=14% Similarity=-0.007 Sum_probs=65.6
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhh-hcCCCC----cceeeecccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLF-KSLPQS----RSYYAAGVPGSF 116 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf-~~l~~~----~~~f~~gvpgsF 116 (329)
+..+|+|+|||+|..|..+.+ . .+|+..|+.. +....- +..+.. .-.|+.. -+++
T Consensus 82 ~g~~VLDlGcGtG~~s~~la~----------------~--~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~-~~D~ 141 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAAS----------------Q--PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKS-KVDV 141 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHHT----------------S--TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEEC-SCCG
T ss_pred CCCEEEEeccCCCHHHHHHHH----------------c--CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEec-cCcH
Confidence 457999999999999988864 1 2688888865 311110 011100 1233410 2355
Q ss_pred ccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCc--eEEEEec
Q 037735 117 YSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGG--LAALVMF 194 (329)
Q Consensus 117 y~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG--~l~~~~~ 194 (329)
.. +|++++|+|+|..+ ++... + .+ ..+. .+ .+|....+.|+||| .+++..+
T Consensus 142 ~~--l~~~~fD~Vvsd~~-~~~~~-~----------------~~-d~~~-----~l-~~L~~~~r~LkpGG~~~~v~~~~ 194 (276)
T 2wa2_A 142 TK--MEPFQADTVLCDIG-ESNPT-A----------------AV-EASR-----TL-TVLNVISRWLEYNQGCGFCVKVL 194 (276)
T ss_dssp GG--CCCCCCSEEEECCC-CCCSC-H----------------HH-HHHH-----HH-HHHHHHHHHHHHSTTCEEEEEES
T ss_pred hh--CCCCCcCEEEECCC-cCCCc-h----------------hh-hHHH-----HH-HHHHHHHHHhccCCCcEEEEEeC
Confidence 43 57889999999888 65321 1 00 0000 01 26888889999999 9999888
Q ss_pred c
Q 037735 195 S 195 (329)
Q Consensus 195 g 195 (329)
.
T Consensus 195 ~ 195 (276)
T 2wa2_A 195 N 195 (276)
T ss_dssp C
T ss_pred C
Confidence 7
No 189
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.09 E-value=1.5e-06 Score=77.10 Aligned_cols=105 Identities=15% Similarity=0.118 Sum_probs=68.7
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC--------Ccceeeeccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ--------SRSYYAAGVP 113 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~--------~~~~f~~gvp 113 (329)
+..+|+|+|||+|..|..+.... ... ...+..+|+..|.........-+.+.. .+..+..+
T Consensus 84 ~~~~VLdiG~G~G~~~~~la~~~--------~~~-~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~-- 152 (227)
T 1r18_A 84 PGARILDVGSGSGYLTACFYRYI--------KAK-GVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEG-- 152 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH--------HHS-CCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEES--
T ss_pred CCCEEEEECCCccHHHHHHHHhc--------ccc-cCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEEC--
Confidence 34699999999999999887522 110 001234899999886655544333211 11234443
Q ss_pred cccccccCCC-CceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEE
Q 037735 114 GSFYSSLFPK-SSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALV 192 (329)
Q Consensus 114 gsFy~~lfp~-~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~ 192 (329)
+... .+|+ +++|+|++..+++|+ + +...+.|+|||+|++.
T Consensus 153 -d~~~-~~~~~~~fD~I~~~~~~~~~---~----------------------------------~~~~~~LkpgG~lvi~ 193 (227)
T 1r18_A 153 -DGRK-GYPPNAPYNAIHVGAAAPDT---P----------------------------------TELINQLASGGRLIVP 193 (227)
T ss_dssp -CGGG-CCGGGCSEEEEEECSCBSSC---C----------------------------------HHHHHTEEEEEEEEEE
T ss_pred -Cccc-CCCcCCCccEEEECCchHHH---H----------------------------------HHHHHHhcCCCEEEEE
Confidence 4533 4454 789999999999873 2 3456789999999999
Q ss_pred eccc
Q 037735 193 MFSV 196 (329)
Q Consensus 193 ~~g~ 196 (329)
+...
T Consensus 194 ~~~~ 197 (227)
T 1r18_A 194 VGPD 197 (227)
T ss_dssp ESCS
T ss_pred EecC
Confidence 8654
No 190
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.09 E-value=3.6e-06 Score=78.69 Aligned_cols=111 Identities=11% Similarity=-0.004 Sum_probs=68.1
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC-------CCcceeeeccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP-------QSRSYYAAGVP 113 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~-------~~~~~f~~gvp 113 (329)
+++.+|||+|||+|..+..+++ . .+..+|+..|+........-+.++ ..+--++.|..
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~--------~-------~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~ 153 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLK--------H-------DSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANG 153 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTT--------S-------TTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCH
T ss_pred CCCCEEEEEcCCcCHHHHHHHh--------c-------CCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcH
Confidence 4568999999999999988864 1 133589999997665544433331 11233455432
Q ss_pred cccccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEe
Q 037735 114 GSFYSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVM 193 (329)
Q Consensus 114 gsFy~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~ 193 (329)
..+.. .+++++|+|++...-+|....+ . -....|++..++-|+|||+|++..
T Consensus 154 ~~~l~--~~~~~fD~Ii~d~~~~~~~~~~-~-------------------------l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 154 AEYVR--KFKNEFDVIIIDSTDPTAGQGG-H-------------------------LFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp HHHGG--GCSSCEEEEEEEC------------------------------------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHHHh--hCCCCceEEEEcCCCcccCchh-h-------------------------hhHHHHHHHHHHhcCCCcEEEEEc
Confidence 22211 2467899999976666643111 0 012478999999999999999985
Q ss_pred c
Q 037735 194 F 194 (329)
Q Consensus 194 ~ 194 (329)
.
T Consensus 206 ~ 206 (296)
T 1inl_A 206 E 206 (296)
T ss_dssp C
T ss_pred c
Confidence 3
No 191
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.08 E-value=5.1e-06 Score=76.67 Aligned_cols=107 Identities=13% Similarity=0.004 Sum_probs=64.9
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhh-hcCCCC----cceeeecccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLF-KSLPQS----RSYYAAGVPGSF 116 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf-~~l~~~----~~~f~~gvpgsF 116 (329)
+..+|+|+|||+|..|..+.+ . .+|+..|+.. +....- +..+.. .-.|+.. -+++
T Consensus 74 ~g~~VLDlGcGtG~~s~~la~----------------~--~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~-~~D~ 133 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAAS----------------R--PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKS-RVDI 133 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHHT----------------S--TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEEC-SCCT
T ss_pred CCCEEEEeCcCCCHHHHHHHH----------------c--CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEec-ccCH
Confidence 457999999999999988764 1 2688888865 311100 001100 1233410 2355
Q ss_pred ccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCc--eEEEEec
Q 037735 117 YSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGG--LAALVMF 194 (329)
Q Consensus 117 y~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG--~l~~~~~ 194 (329)
.. +|++++|+|+|..+ +.... + .+ ... ..+ ..|....+.|+||| .+++..+
T Consensus 134 ~~--l~~~~fD~V~sd~~-~~~~~-~----------------~~-d~~-----~~l-~~L~~~~r~LkpGG~~~fv~kv~ 186 (265)
T 2oxt_A 134 HT--LPVERTDVIMCDVG-ESSPK-W----------------SV-ESE-----RTI-KILELLEKWKVKNPSADFVVKVL 186 (265)
T ss_dssp TT--SCCCCCSEEEECCC-CCCSC-H----------------HH-HHH-----HHH-HHHHHHHHHHHHCTTCEEEEEES
T ss_pred hH--CCCCCCcEEEEeCc-ccCCc-c----------------ch-hHH-----HHH-HHHHHHHHHhccCCCeEEEEEeC
Confidence 43 57889999999887 55221 1 00 000 001 26888889999999 9999888
Q ss_pred c
Q 037735 195 S 195 (329)
Q Consensus 195 g 195 (329)
.
T Consensus 187 ~ 187 (265)
T 2oxt_A 187 C 187 (265)
T ss_dssp C
T ss_pred C
Confidence 7
No 192
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.07 E-value=8.2e-06 Score=74.29 Aligned_cols=99 Identities=11% Similarity=0.048 Sum_probs=68.0
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC---CCCcceeeecccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL---PQSRSYYAAGVPGSFYS 118 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l---~~~~~~f~~gvpgsFy~ 118 (329)
...+|+|+|||+|..++.+.. . .|..+|+..|........+-+.. .-..-.++.| +..+
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~--------~-------~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~---d~~~ 141 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKI--------V-------RPELELVLVDATRKKVAFVERAIEVLGLKGARALWG---RAEV 141 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHH--------H-------CTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEEC---CHHH
T ss_pred CCCEEEEEcCCCCHHHHHHHH--------H-------CCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEEC---cHHH
Confidence 467999999999999998864 2 34578999999876655543332 2112234443 4533
Q ss_pred ccC---CCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEe
Q 037735 119 SLF---PKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVM 193 (329)
Q Consensus 119 ~lf---p~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~ 193 (329)
-.. +++++|+|+|... . |+..+++...+-|+|||++++..
T Consensus 142 ~~~~~~~~~~fD~I~s~a~-------~----------------------------~~~~ll~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 142 LAREAGHREAYARAVARAV-------A----------------------------PLCVLSELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp HTTSTTTTTCEEEEEEESS-------C----------------------------CHHHHHHHHGGGEEEEEEEEEEE
T ss_pred hhcccccCCCceEEEECCc-------C----------------------------CHHHHHHHHHHHcCCCeEEEEEe
Confidence 222 2489999998532 1 34578999999999999988755
No 193
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.06 E-value=1.8e-06 Score=77.29 Aligned_cols=105 Identities=18% Similarity=0.179 Sum_probs=66.8
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC---CCC-cceeeeccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL---PQS-RSYYAAGVPGSFY 117 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l---~~~-~~~f~~gvpgsFy 117 (329)
+..+|+|+|||+|..|..+.... .+..+|+..|.........-+.+ .-. +-.+..+....+.
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~--------------~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~ 125 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASAL--------------PEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETL 125 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHS--------------CTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHH
T ss_pred CcCEEEEEeCCCCHHHHHHHHhC--------------CCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHH
Confidence 35699999999999999887521 12358999998765554433332 111 1223333211111
Q ss_pred ------------cccCCC--CceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHh
Q 037735 118 ------------SSLFPK--SSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQEL 183 (329)
Q Consensus 118 ------------~~lfp~--~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL 183 (329)
..-||+ +++|+|++... . .++..+|+...+.|
T Consensus 126 ~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~---~-------------------------------~~~~~~l~~~~~~L 171 (239)
T 2hnk_A 126 QVLIDSKSAPSWASDFAFGPSSIDLFFLDAD---K-------------------------------ENYPNYYPLILKLL 171 (239)
T ss_dssp HHHHHCSSCCGGGTTTCCSTTCEEEEEECSC---G-------------------------------GGHHHHHHHHHHHE
T ss_pred HHHHhhcccccccccccCCCCCcCEEEEeCC---H-------------------------------HHHHHHHHHHHHHc
Confidence 122554 89999997632 1 13447789999999
Q ss_pred ccCceEEEEec
Q 037735 184 VPGGLAALVMF 194 (329)
Q Consensus 184 ~pGG~l~~~~~ 194 (329)
+|||++++...
T Consensus 172 ~pgG~lv~~~~ 182 (239)
T 2hnk_A 172 KPGGLLIADNV 182 (239)
T ss_dssp EEEEEEEEECS
T ss_pred CCCeEEEEEcc
Confidence 99999999764
No 194
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.06 E-value=6.8e-06 Score=75.23 Aligned_cols=99 Identities=17% Similarity=0.175 Sum_probs=68.2
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC----Ccceeeeccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ----SRSYYAAGVPGSFY 117 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~----~~~~f~~gvpgsFy 117 (329)
+..+|+|+|||+|..+..+.+.+ .|..+++..|+.......+-+.+.. .+-.+.. +++.
T Consensus 112 ~~~~VLDiG~G~G~~~~~la~~~--------------~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~---~d~~ 174 (277)
T 1o54_A 112 EGDRIIDTGVGSGAMCAVLARAV--------------GSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKV---RDIS 174 (277)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHT--------------TTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEEC---CCGG
T ss_pred CCCEEEEECCcCCHHHHHHHHHh--------------CCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEE---CCHH
Confidence 34699999999999999887522 2346899999977665554433211 1122333 4564
Q ss_pred cccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEec
Q 037735 118 SSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMF 194 (329)
Q Consensus 118 ~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~ 194 (329)
+ .+|++++|++++. +|.. ..+|+...+.|+|||++++...
T Consensus 175 ~-~~~~~~~D~V~~~--------~~~~----------------------------~~~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 175 E-GFDEKDVDALFLD--------VPDP----------------------------WNYIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp G-CCSCCSEEEEEEC--------CSCG----------------------------GGTHHHHHHHEEEEEEEEEEES
T ss_pred H-cccCCccCEEEEC--------CcCH----------------------------HHHHHHHHHHcCCCCEEEEEeC
Confidence 4 3788899999983 2321 2568888999999999999873
No 195
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.05 E-value=5.8e-06 Score=78.00 Aligned_cols=100 Identities=10% Similarity=0.070 Sum_probs=62.9
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC--------------CCcce
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP--------------QSRSY 107 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~--------------~~~~~ 107 (329)
+..+|+|+|||+|.+|..+...+ .|..+|+..|+........-+.+. ..+--
T Consensus 105 ~g~~VLDiG~G~G~~~~~la~~~--------------g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~ 170 (336)
T 2b25_A 105 PGDTVLEAGSGSGGMSLFLSKAV--------------GSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVD 170 (336)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH--------------CTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHHh--------------CCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceE
Confidence 45699999999999999987532 233589999997655444332221 01122
Q ss_pred eeeccccccccc--cCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhcc
Q 037735 108 YAAGVPGSFYSS--LFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVP 185 (329)
Q Consensus 108 f~~gvpgsFy~~--lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~p 185 (329)
+.. +++.+. -++++++|+|++...-.| .+|....+.|+|
T Consensus 171 ~~~---~d~~~~~~~~~~~~fD~V~~~~~~~~------------------------------------~~l~~~~~~Lkp 211 (336)
T 2b25_A 171 FIH---KDISGATEDIKSLTFDAVALDMLNPH------------------------------------VTLPVFYPHLKH 211 (336)
T ss_dssp EEE---SCTTCCC-------EEEEEECSSSTT------------------------------------TTHHHHGGGEEE
T ss_pred EEE---CChHHcccccCCCCeeEEEECCCCHH------------------------------------HHHHHHHHhcCC
Confidence 333 355443 257788999998543222 248888999999
Q ss_pred CceEEEEec
Q 037735 186 GGLAALVMF 194 (329)
Q Consensus 186 GG~l~~~~~ 194 (329)
||.|++...
T Consensus 212 gG~lv~~~~ 220 (336)
T 2b25_A 212 GGVCAVYVV 220 (336)
T ss_dssp EEEEEEEES
T ss_pred CcEEEEEeC
Confidence 999997764
No 196
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.04 E-value=4e-06 Score=79.92 Aligned_cols=102 Identities=16% Similarity=0.088 Sum_probs=62.9
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC---CC-Ccceeeeccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL---PQ-SRSYYAAGVPGSFY 117 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l---~~-~~~~f~~gvpgsFy 117 (329)
+..+|||+|||+|..+..+.+ .+..+|+..|+.. +....-+.+ .- .+--++. +++.
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~----------------~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~---~d~~ 109 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQ----------------AGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIP---GKVE 109 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHH----------------TTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEE---SCTT
T ss_pred CcCEEEEcCCCccHHHHHHHh----------------CCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEE---cchh
Confidence 457999999999999887764 1224899999863 543332222 11 1122333 3453
Q ss_pred cccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEe
Q 037735 118 SSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVM 193 (329)
Q Consensus 118 ~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~ 193 (329)
.+-+++++|+|+|...++.+... ++..+|....+.|+|||+++++.
T Consensus 110 -~~~~~~~~D~Ivs~~~~~~~~~~-----------------------------~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 110 -EVSLPEQVDIIISEPMGYMLFNE-----------------------------RMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp -TCCCSSCEEEEEECCCBTTBTTT-----------------------------SHHHHHHHGGGGEEEEEEEESCE
T ss_pred -hCCCCCceeEEEEeCchhcCChH-----------------------------HHHHHHHHHHhhcCCCeEEEEec
Confidence 33334789999999765433211 22344555568999999998654
No 197
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.04 E-value=2.2e-05 Score=73.47 Aligned_cols=107 Identities=16% Similarity=0.122 Sum_probs=63.4
Q ss_pred CCceEEEeeeCCCCccc----HHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCccee-eeccccc
Q 037735 41 PNTFRIADFGCSTGPNT----FIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYY-AAGVPGS 115 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT----~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f-~~gvpgs 115 (329)
.+..+|+|+|||+|.+. ..+.. .. .+..+|+..|+... ++ +-.| +.| +
T Consensus 62 ~~g~~VLDLGcGsg~~~GpGs~~~a~--------~~------~~~~~V~gvDis~~--------v~--~v~~~i~g---D 114 (290)
T 2xyq_A 62 PYNMRVIHFGAGSDKGVAPGTAVLRQ--------WL------PTGTLLVDSDLNDF--------VS--DADSTLIG---D 114 (290)
T ss_dssp CTTCEEEEESCCCTTSBCHHHHHHHH--------HS------CTTCEEEEEESSCC--------BC--SSSEEEES---C
T ss_pred CCCCEEEEeCCCCCCCCCcHHHHHHH--------Hc------CCCCEEEEEECCCC--------CC--CCEEEEEC---c
Confidence 34578999999874443 22221 21 22468999999764 22 2234 444 5
Q ss_pred cccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecc
Q 037735 116 FYSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFS 195 (329)
Q Consensus 116 Fy~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g 195 (329)
+.+..+ ++++|+|+|+.+.+|.-..... ... -...+...|+.-.+.|+|||.|++..+.
T Consensus 115 ~~~~~~-~~~fD~Vvsn~~~~~~g~~~~d-~~~-------------------~~~l~~~~l~~a~r~LkpGG~~v~~~~~ 173 (290)
T 2xyq_A 115 CATVHT-ANKWDLIISDMYDPRTKHVTKE-NDS-------------------KEGFFTYLCGFIKQKLALGGSIAVKITE 173 (290)
T ss_dssp GGGCCC-SSCEEEEEECCCCCC---CCSC-CCC-------------------CCTHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred cccCCc-cCcccEEEEcCCcccccccccc-ccc-------------------hHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 643333 4789999998765552110000 000 0123457899999999999999997754
No 198
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.03 E-value=2.7e-06 Score=74.97 Aligned_cols=103 Identities=12% Similarity=0.041 Sum_probs=67.7
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC---CCC-cceeeeccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL---PQS-RSYYAAGVPGSFY 117 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l---~~~-~~~f~~gvpgsFy 117 (329)
++.+|+|+|||+|..|..+...+ ++..+|+..|.........-+.+ .-. +-.|..| ++.
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~--------------~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~---d~~ 126 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLAL--------------PKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLS---PAK 126 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTC--------------CTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES---CHH
T ss_pred CCCEEEEeCCcchHHHHHHHHhC--------------CCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeC---CHH
Confidence 35699999999999999887411 22468999999876665543332 211 2334554 342
Q ss_pred ccc--CCC----CceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEE
Q 037735 118 SSL--FPK----SSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAAL 191 (329)
Q Consensus 118 ~~l--fp~----~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~ 191 (329)
+.+ ++. +++|+|++.. |. .+...+|+...+-|+|||++++
T Consensus 127 ~~~~~~~~~~~~~~fD~v~~~~---~~-------------------------------~~~~~~l~~~~~~L~pgG~lv~ 172 (225)
T 3tr6_A 127 DTLAELIHAGQAWQYDLIYIDA---DK-------------------------------ANTDLYYEESLKLLREGGLIAV 172 (225)
T ss_dssp HHHHHHHTTTCTTCEEEEEECS---CG-------------------------------GGHHHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHhhhccCCCCccEEEECC---CH-------------------------------HHHHHHHHHHHHhcCCCcEEEE
Confidence 222 111 7899998433 21 2445789999999999999998
Q ss_pred Eecc
Q 037735 192 VMFS 195 (329)
Q Consensus 192 ~~~g 195 (329)
....
T Consensus 173 ~~~~ 176 (225)
T 3tr6_A 173 DNVL 176 (225)
T ss_dssp ECSS
T ss_pred eCCC
Confidence 6553
No 199
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.02 E-value=5.9e-06 Score=76.50 Aligned_cols=109 Identities=14% Similarity=0.043 Sum_probs=69.5
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC-------------CCCcce
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL-------------PQSRSY 107 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l-------------~~~~~~ 107 (329)
+++.+|||+|||+|..+..+++ .+..+++..|+........-+.+ ...+--
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~----------------~~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~ 137 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQ----------------HDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAK 137 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTT----------------SCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHh----------------CCCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEE
Confidence 4567999999999999988863 12358999998765544433333 111223
Q ss_pred eeeccccccccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCc
Q 037735 108 YAAGVPGSFYSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGG 187 (329)
Q Consensus 108 f~~gvpgsFy~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG 187 (329)
+..+....+... ++++|+|++....+|-. +.. -.-..|++..++.|+|||
T Consensus 138 ~~~~D~~~~l~~---~~~fD~Ii~d~~~~~~~--~~~-------------------------l~~~~~l~~~~~~L~pgG 187 (281)
T 1mjf_A 138 LTIGDGFEFIKN---NRGFDVIIADSTDPVGP--AKV-------------------------LFSEEFYRYVYDALNNPG 187 (281)
T ss_dssp EEESCHHHHHHH---CCCEEEEEEECCCCC--------------------------------TTSHHHHHHHHHHEEEEE
T ss_pred EEECchHHHhcc---cCCeeEEEECCCCCCCc--chh-------------------------hhHHHHHHHHHHhcCCCc
Confidence 455433233222 67899999977665521 100 001478999999999999
Q ss_pred eEEEEecc
Q 037735 188 LAALVMFS 195 (329)
Q Consensus 188 ~l~~~~~g 195 (329)
+|++....
T Consensus 188 ~lv~~~~~ 195 (281)
T 1mjf_A 188 IYVTQAGS 195 (281)
T ss_dssp EEEEEEEE
T ss_pred EEEEEcCC
Confidence 99998643
No 200
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.02 E-value=2.1e-06 Score=77.85 Aligned_cols=103 Identities=14% Similarity=0.173 Sum_probs=68.0
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhc---CCCC-cceeeeccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKS---LPQS-RSYYAAGVPGSFY 117 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~---l~~~-~~~f~~gvpgsFy 117 (329)
++.+|+|+|||+|..|+.+...+ .+..+|+..|+........-+. .+-. +--+..| ++.
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~--------------~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~g---da~ 122 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLAL--------------PDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLG---PAL 122 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTS--------------CTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEES---CHH
T ss_pred CcCEEEEeeCCcCHHHHHHHHhC--------------CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc---CHH
Confidence 45799999999999999987521 2346899999976654433222 2211 2334554 443
Q ss_pred cccCC------CCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEE
Q 037735 118 SSLFP------KSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAAL 191 (329)
Q Consensus 118 ~~lfp------~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~ 191 (329)
+.+.. ++++|+|++... . .+...+|+...+-|+|||+|++
T Consensus 123 ~~l~~~~~~~~~~~fD~V~~d~~---~-------------------------------~~~~~~l~~~~~~LkpGG~lv~ 168 (242)
T 3r3h_A 123 DTLHSLLNEGGEHQFDFIFIDAD---K-------------------------------TNYLNYYELALKLVTPKGLIAI 168 (242)
T ss_dssp HHHHHHHHHHCSSCEEEEEEESC---G-------------------------------GGHHHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHhhccCCCCEeEEEEcCC---h-------------------------------HHhHHHHHHHHHhcCCCeEEEE
Confidence 33311 589999987532 1 1345778999999999999999
Q ss_pred Eecc
Q 037735 192 VMFS 195 (329)
Q Consensus 192 ~~~g 195 (329)
...-
T Consensus 169 d~~~ 172 (242)
T 3r3h_A 169 DNIF 172 (242)
T ss_dssp ECSS
T ss_pred ECCc
Confidence 7554
No 201
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.02 E-value=2e-05 Score=68.24 Aligned_cols=75 Identities=9% Similarity=-0.056 Sum_probs=49.9
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeeccccccccccC
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSSLF 121 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~lf 121 (329)
+..+|+|+|||+|..+..+.. .+..+|+..|+........-+.+. +--|+.+ ++.+ +
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~----------------~~~~~v~~vD~~~~~~~~a~~~~~--~~~~~~~---d~~~--~ 107 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYL----------------LGAESVTAFDIDPDAIETAKRNCG--GVNFMVA---DVSE--I 107 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHH----------------TTBSEEEEEESCHHHHHHHHHHCT--TSEEEEC---CGGG--C
T ss_pred CCCEEEEEeCCccHHHHHHHH----------------cCCCEEEEEECCHHHHHHHHHhcC--CCEEEEC---cHHH--C
Confidence 457999999999999888764 111369999998777666555544 2234444 4533 3
Q ss_pred CCCceeEEEeccceecccC
Q 037735 122 PKSSLHFVHSSYTLHWLSK 140 (329)
Q Consensus 122 p~~s~dl~~Ss~alhWLs~ 140 (329)
| +++|+|+++-.+||+.+
T Consensus 108 ~-~~~D~v~~~~p~~~~~~ 125 (200)
T 1ne2_A 108 S-GKYDTWIMNPPFGSVVK 125 (200)
T ss_dssp C-CCEEEEEECCCC-----
T ss_pred C-CCeeEEEECCCchhccC
Confidence 4 78999999999999764
No 202
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.01 E-value=7.2e-06 Score=78.06 Aligned_cols=113 Identities=13% Similarity=0.057 Sum_probs=75.5
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC---Ccceeeecccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ---SRSYYAAGVPGSFYS 118 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~---~~~~f~~gvpgsFy~ 118 (329)
+..+|+|+|||+|..++.+.... .|...++..|+........-+++.. ..--|..+ ++.+
T Consensus 203 ~~~~vLD~gcGsG~~~ie~a~~~--------------~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~---D~~~ 265 (354)
T 3tma_A 203 PGMRVLDPFTGSGTIALEAASTL--------------GPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRA---DARH 265 (354)
T ss_dssp TTCCEEESSCTTSHHHHHHHHHH--------------CTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEEC---CGGG
T ss_pred CCCEEEeCCCCcCHHHHHHHHhh--------------CCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeC---Chhh
Confidence 45689999999999988886521 1346899999987776665444321 12234443 5655
Q ss_pred ccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEec
Q 037735 119 SLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMF 194 (329)
Q Consensus 119 ~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~ 194 (329)
-..|.+++|+++++--..|... ... ........+++...+.|+|||.+++.+.
T Consensus 266 ~~~~~~~~D~Ii~npPyg~r~~---------------~~~--------~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 266 LPRFFPEVDRILANPPHGLRLG---------------RKE--------GLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp GGGTCCCCSEEEECCCSCC-------------------CH--------HHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred CccccCCCCEEEECCCCcCccC---------------Ccc--------cHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 5566778899999765554211 011 1223446889999999999999999875
No 203
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.00 E-value=4.7e-06 Score=78.44 Aligned_cols=106 Identities=10% Similarity=0.060 Sum_probs=63.3
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCC----CcchHHhh-hhcCCCCcceeeecccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDH----SDNDFNTL-FKSLPQSRSYYAAGVPGSF 116 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDL----p~ndfn~l-f~~l~~~~~~f~~gvpgsF 116 (329)
+..+|+|+|||+|..|..+.+. -+|+..|+ ..++...+ .+.+......|..|+ ++
T Consensus 82 ~g~~VLDlGcG~G~~s~~la~~------------------~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--D~ 141 (305)
T 2p41_A 82 PEGKVVDLGCGRGGWSYYCGGL------------------KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGV--DV 141 (305)
T ss_dssp CCEEEEEETCTTSHHHHHHHTS------------------TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSC--CT
T ss_pred CCCEEEEEcCCCCHHHHHHHhc------------------CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEecc--cc
Confidence 3479999999999999888741 14677776 22221100 011100112344431 44
Q ss_pred ccccCCCCceeEEEecccee---cccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEe
Q 037735 117 YSSLFPKSSLHFVHSSYTLH---WLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVM 193 (329)
Q Consensus 117 y~~lfp~~s~dl~~Ss~alh---WLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~ 193 (329)
.. +|++++|+|+|..+.+ |..+.+ ..+ ..|....+.|+|||.|++.+
T Consensus 142 ~~--l~~~~fD~V~sd~~~~~g~~~~d~~---------------------------~~l-~~L~~~~~~LkpGG~~v~kv 191 (305)
T 2p41_A 142 FF--IPPERCDTLLCDIGESSPNPTVEAG---------------------------RTL-RVLNLVENWLSNNTQFCVKV 191 (305)
T ss_dssp TT--SCCCCCSEEEECCCCCCSSHHHHHH---------------------------HHH-HHHHHHHHHCCTTCEEEEEE
T ss_pred cc--CCcCCCCEEEECCccccCcchhhHH---------------------------HHH-HHHHHHHHHhCCCCEEEEEe
Confidence 32 3678999999988764 321100 011 36788889999999999988
Q ss_pred cccC
Q 037735 194 FSVP 197 (329)
Q Consensus 194 ~g~~ 197 (329)
+...
T Consensus 192 ~~~~ 195 (305)
T 2p41_A 192 LNPY 195 (305)
T ss_dssp SCCC
T ss_pred CCCC
Confidence 7653
No 204
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.00 E-value=2.7e-06 Score=74.93 Aligned_cols=106 Identities=10% Similarity=0.064 Sum_probs=67.2
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC---CCC-cceeeeccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL---PQS-RSYYAAGVPGSFY 117 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l---~~~-~~~f~~gvpgsFy 117 (329)
++.+|+|+|||+|..|..+.. .+ ++..+|+..|+........-+.+ .-. +--+..|....+.
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~--------~~------~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 123 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLAR--------GL------SSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSL 123 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHT--------TC------CSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHH
T ss_pred CCCEEEEecCCccHHHHHHHH--------hC------CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH
Confidence 457999999999999998874 21 22468999999876655543332 211 1234444322221
Q ss_pred cccCC--CCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecc
Q 037735 118 SSLFP--KSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFS 195 (329)
Q Consensus 118 ~~lfp--~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g 195 (329)
..+.. .+++|+|++....+ +...+|+...+.|+|||++++....
T Consensus 124 ~~~~~~~~~~fD~v~~d~~~~----------------------------------~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 124 QQIENEKYEPFDFIFIDADKQ----------------------------------NNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp HHHHHTTCCCCSEEEECSCGG----------------------------------GHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred HHHHhcCCCCcCEEEEcCCcH----------------------------------HHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 11111 16799998754311 3347789999999999999886553
No 205
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=97.98 E-value=1.4e-05 Score=77.51 Aligned_cols=100 Identities=17% Similarity=0.181 Sum_probs=62.4
Q ss_pred eEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC--C--CCcceeeeccccccccc
Q 037735 44 FRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL--P--QSRSYYAAGVPGSFYSS 119 (329)
Q Consensus 44 ~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l--~--~~~~~f~~gvpgsFy~~ 119 (329)
-+|||+|||||.+|+...+ . -. -+|+..|.. ++....-+.+ . ..+-.++.| +. +.
T Consensus 85 k~VLDvG~GtGiLs~~Aa~--------a-------GA-~~V~ave~s-~~~~~a~~~~~~n~~~~~i~~i~~---~~-~~ 143 (376)
T 4hc4_A 85 KTVLDVGAGTGILSIFCAQ--------A-------GA-RRVYAVEAS-AIWQQAREVVRFNGLEDRVHVLPG---PV-ET 143 (376)
T ss_dssp CEEEEETCTTSHHHHHHHH--------T-------TC-SEEEEEECS-TTHHHHHHHHHHTTCTTTEEEEES---CT-TT
T ss_pred CEEEEeCCCccHHHHHHHH--------h-------CC-CEEEEEeCh-HHHHHHHHHHHHcCCCceEEEEee---ee-ee
Confidence 5799999999998877653 1 11 379999965 3443322211 1 112234443 45 44
Q ss_pred cCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEE
Q 037735 120 LFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALV 192 (329)
Q Consensus 120 lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~ 192 (329)
+-.+..+|+++|-+.-..|-. +..+..++.+|.+-|+|||.|+..
T Consensus 144 ~~lpe~~DvivsE~~~~~l~~----------------------------e~~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 144 VELPEQVDAIVSEWMGYGLLH----------------------------ESMLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp CCCSSCEEEEECCCCBTTBTT----------------------------TCSHHHHHHHHHHHEEEEEEEESC
T ss_pred ecCCccccEEEeecccccccc----------------------------cchhhhHHHHHHhhCCCCceECCc
Confidence 434478999999433222211 225668899999999999998743
No 206
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=97.98 E-value=4.2e-06 Score=82.61 Aligned_cols=103 Identities=13% Similarity=-0.003 Sum_probs=66.5
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhh-------hhc---CC--CCccee
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTL-------FKS---LP--QSRSYY 108 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~l-------f~~---l~--~~~~~f 108 (329)
....+|+|+|||+|..+..+.... +..+|+.-|+........ -+. .. ..+--+
T Consensus 241 ~~g~~VLDLGCGsG~la~~LA~~~---------------g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~ 305 (433)
T 1u2z_A 241 KKGDTFMDLGSGVGNCVVQAALEC---------------GCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEF 305 (433)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHH---------------CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEE
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHC---------------CCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEE
Confidence 345799999999999999987522 123799999987654433 222 11 111223
Q ss_pred eeccccccccc-cC--CCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhcc
Q 037735 109 AAGVPGSFYSS-LF--PKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVP 185 (329)
Q Consensus 109 ~~gvpgsFy~~-lf--p~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~p 185 (329)
+.| .++... .+ +.+++|+|+++.++++ | |+...|+...+.|+|
T Consensus 306 i~g--D~~~~~~~~~~~~~~FDvIvvn~~l~~----~----------------------------d~~~~L~el~r~LKp 351 (433)
T 1u2z_A 306 SLK--KSFVDNNRVAELIPQCDVILVNNFLFD----E----------------------------DLNKKVEKILQTAKV 351 (433)
T ss_dssp EES--SCSTTCHHHHHHGGGCSEEEECCTTCC----H----------------------------HHHHHHHHHHTTCCT
T ss_pred EEc--CccccccccccccCCCCEEEEeCcccc----c----------------------------cHHHHHHHHHHhCCC
Confidence 433 133221 11 3478999999877632 2 444678999999999
Q ss_pred CceEEEE
Q 037735 186 GGLAALV 192 (329)
Q Consensus 186 GG~l~~~ 192 (329)
||+|++.
T Consensus 352 GG~lVi~ 358 (433)
T 1u2z_A 352 GCKIISL 358 (433)
T ss_dssp TCEEEES
T ss_pred CeEEEEe
Confidence 9999987
No 207
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=97.98 E-value=6.9e-06 Score=76.19 Aligned_cols=108 Identities=9% Similarity=-0.002 Sum_probs=71.7
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC-------Ccceeeeccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ-------SRSYYAAGVP 113 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~-------~~~~f~~gvp 113 (329)
+++.+|+|+|||+|..+..+.+ . .|..+++..|+........-+.++. .+--++.+..
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~--------~-------~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~ 141 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCK--------Y-------KSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDA 141 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTT--------C-------TTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCH
T ss_pred CCCCeEEEEeCCcCHHHHHHHH--------c-------CCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECCh
Confidence 4568999999999999888863 1 2335899999976655544444432 1223455433
Q ss_pred cccccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcH--HHHHHHHHHHhccCceEEE
Q 037735 114 GSFYSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDF--QTFLNTRAQELVPGGLAAL 191 (329)
Q Consensus 114 gsFy~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~--~~FL~~ra~eL~pGG~l~~ 191 (329)
..+.. ..++++|+|++....+|. |. .++ ..|++..++.|+|||+|++
T Consensus 142 ~~~l~--~~~~~fD~Ii~d~~~~~~---~~--------------------------~~l~~~~~l~~~~~~L~pgG~lv~ 190 (283)
T 2i7c_A 142 SKFLE--NVTNTYDVIIVDSSDPIG---PA--------------------------ETLFNQNFYEKIYNALKPNGYCVA 190 (283)
T ss_dssp HHHHH--HCCSCEEEEEEECCCTTT---GG--------------------------GGGSSHHHHHHHHHHEEEEEEEEE
T ss_pred HHHHH--hCCCCceEEEEcCCCCCC---cc--------------------------hhhhHHHHHHHHHHhcCCCcEEEE
Confidence 22211 136889999997665552 11 122 4889999999999999998
Q ss_pred Eec
Q 037735 192 VMF 194 (329)
Q Consensus 192 ~~~ 194 (329)
...
T Consensus 191 ~~~ 193 (283)
T 2i7c_A 191 QCE 193 (283)
T ss_dssp ECC
T ss_pred ECC
Confidence 853
No 208
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=97.97 E-value=3.7e-06 Score=76.35 Aligned_cols=101 Identities=12% Similarity=0.193 Sum_probs=67.0
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC---CC-Ccceeeeccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL---PQ-SRSYYAAGVPGSFY 117 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l---~~-~~~~f~~gvpgsFy 117 (329)
++.+|+|+|||+|..|+.+...+ ++..+|+..|.........-+.+ .- .+--+..| +..
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~--------------~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~g---da~ 141 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAI--------------PEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREG---PAL 141 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHS--------------CTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEES---CHH
T ss_pred CcCEEEEeCCCcCHHHHHHHHhC--------------CCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEEC---CHH
Confidence 45799999999999999887522 22468999999876655443332 11 11234444 343
Q ss_pred ccc--C-----CCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEE
Q 037735 118 SSL--F-----PKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAA 190 (329)
Q Consensus 118 ~~l--f-----p~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~ 190 (329)
+.+ + +++++|++++... . .+...+|+...+-|+|||+++
T Consensus 142 ~~l~~l~~~~~~~~~fD~V~~d~~---~-------------------------------~~~~~~l~~~~~~LkpGG~lv 187 (247)
T 1sui_A 142 PVLDEMIKDEKNHGSYDFIFVDAD---K-------------------------------DNYLNYHKRLIDLVKVGGVIG 187 (247)
T ss_dssp HHHHHHHHSGGGTTCBSEEEECSC---S-------------------------------TTHHHHHHHHHHHBCTTCCEE
T ss_pred HHHHHHHhccCCCCCEEEEEEcCc---h-------------------------------HHHHHHHHHHHHhCCCCeEEE
Confidence 322 1 2688999997532 1 133477888899999999999
Q ss_pred EEe
Q 037735 191 LVM 193 (329)
Q Consensus 191 ~~~ 193 (329)
+..
T Consensus 188 ~d~ 190 (247)
T 1sui_A 188 YDN 190 (247)
T ss_dssp EEC
T ss_pred Eec
Confidence 865
No 209
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=97.96 E-value=5.3e-06 Score=79.11 Aligned_cols=108 Identities=17% Similarity=0.096 Sum_probs=71.3
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC-------CCcceeeeccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP-------QSRSYYAAGVP 113 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~-------~~~~~f~~gvp 113 (329)
+++.+|||+|||+|..+..+.+ . .|..+|+..|+........-+.++ ..+--+..|
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~--------~-------~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~-- 181 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVAR--------H-------ASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIG-- 181 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTT--------C-------TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEES--
T ss_pred CCCCEEEEECCCccHHHHHHHH--------c-------CCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEC--
Confidence 4568999999999999988863 1 233589999998766555443332 112334554
Q ss_pred ccccccc--CCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEE
Q 037735 114 GSFYSSL--FPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAAL 191 (329)
Q Consensus 114 gsFy~~l--fp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~ 191 (329)
+..+-+ ++++++|+|++...-+|.. + . .-....|++...+.|+|||+|++
T Consensus 182 -D~~~~l~~~~~~~fDlIi~d~~~p~~~--~-~------------------------~l~~~~~l~~~~~~LkpgG~lv~ 233 (334)
T 1xj5_A 182 -DGVAFLKNAAEGSYDAVIVDSSDPIGP--A-K------------------------ELFEKPFFQSVARALRPGGVVCT 233 (334)
T ss_dssp -CHHHHHHTSCTTCEEEEEECCCCTTSG--G-G------------------------GGGSHHHHHHHHHHEEEEEEEEE
T ss_pred -CHHHHHHhccCCCccEEEECCCCccCc--c-h------------------------hhhHHHHHHHHHHhcCCCcEEEE
Confidence 343322 3568999999976544410 0 0 00124889999999999999999
Q ss_pred Ee
Q 037735 192 VM 193 (329)
Q Consensus 192 ~~ 193 (329)
..
T Consensus 234 ~~ 235 (334)
T 1xj5_A 234 QA 235 (334)
T ss_dssp EC
T ss_pred ec
Confidence 74
No 210
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=97.94 E-value=8.7e-06 Score=76.49 Aligned_cols=110 Identities=13% Similarity=0.057 Sum_probs=69.4
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC-------CCcceeeeccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP-------QSRSYYAAGVP 113 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~-------~~~~~f~~gvp 113 (329)
+++.+|||+|||+|..++.+.+ + .|..+++..|+........-+.++ ..+--++.+.
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~--------~-------~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~D- 157 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVK--------H-------PSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGD- 157 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTT--------C-------TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESC-
T ss_pred CCCCEEEEECCCchHHHHHHHH--------c-------CCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECc-
Confidence 4568999999999999988863 1 233589999997666554433332 1122344443
Q ss_pred ccccccc-CCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEE
Q 037735 114 GSFYSSL-FPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALV 192 (329)
Q Consensus 114 gsFy~~l-fp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~ 192 (329)
..+-+ .+++++|+|++....+|- |.. .-....|++...+.|+|||+|++.
T Consensus 158 --a~~~l~~~~~~fD~Ii~d~~~~~~---~~~------------------------~l~~~~~l~~~~~~LkpgG~lv~~ 208 (304)
T 2o07_A 158 --GFEFMKQNQDAFDVIITDSSDPMG---PAE------------------------SLFKESYYQLMKTALKEDGVLCCQ 208 (304)
T ss_dssp --HHHHHHTCSSCEEEEEEECC--------------------------------------CHHHHHHHHHEEEEEEEEEE
T ss_pred --HHHHHhhCCCCceEEEECCCCCCC---cch------------------------hhhHHHHHHHHHhccCCCeEEEEe
Confidence 33222 356899999997766652 110 001137899999999999999997
Q ss_pred ecc
Q 037735 193 MFS 195 (329)
Q Consensus 193 ~~g 195 (329)
...
T Consensus 209 ~~~ 211 (304)
T 2o07_A 209 GEC 211 (304)
T ss_dssp EEC
T ss_pred cCC
Confidence 743
No 211
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=97.94 E-value=9.1e-06 Score=76.82 Aligned_cols=108 Identities=14% Similarity=0.115 Sum_probs=67.8
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC-------Ccceeeeccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ-------SRSYYAAGVP 113 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~-------~~~~f~~gvp 113 (329)
+++.+|||+|||+|..+..+++ . .|..+|+..|+........-+.++. .+--+..+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~--------~-------~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~-- 169 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLK--------H-------ESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCG-- 169 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTT--------C-------TTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECS--
T ss_pred CCCCEEEEEcCCcCHHHHHHHH--------c-------CCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEC--
Confidence 4567999999999999988863 1 2346899999987665554444432 12234444
Q ss_pred ccccccc-CCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEE
Q 037735 114 GSFYSSL-FPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALV 192 (329)
Q Consensus 114 gsFy~~l-fp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~ 192 (329)
+..+-+ .+++++|+|++...-+|- |.. ..|. ..|++...+.|+|||+|++.
T Consensus 170 -D~~~~l~~~~~~fD~Ii~d~~~~~~---~~~-----------------~l~t-------~~~l~~~~~~LkpgG~lv~~ 221 (314)
T 2b2c_A 170 -DGFEFLKNHKNEFDVIITDSSDPVG---PAE-----------------SLFG-------QSYYELLRDALKEDGILSSQ 221 (314)
T ss_dssp -CHHHHHHHCTTCEEEEEECCC----------------------------------------HHHHHHHHEEEEEEEEEE
T ss_pred -hHHHHHHhcCCCceEEEEcCCCCCC---cch-----------------hhhH-------HHHHHHHHhhcCCCeEEEEE
Confidence 333222 267899999997654441 100 0010 47899999999999999997
Q ss_pred e
Q 037735 193 M 193 (329)
Q Consensus 193 ~ 193 (329)
.
T Consensus 222 ~ 222 (314)
T 2b2c_A 222 G 222 (314)
T ss_dssp C
T ss_pred C
Confidence 6
No 212
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=97.93 E-value=1.1e-05 Score=74.11 Aligned_cols=122 Identities=11% Similarity=-0.051 Sum_probs=73.2
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC---CCcceeeecccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP---QSRSYYAAGVPGSFYS 118 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~---~~~~~f~~gvpgsFy~ 118 (329)
+..+|+|+|||+|..|..+.+.. ....+|+.+|+.......+-+++. -..-.+..+ ++..
T Consensus 83 ~g~~VLDlgaG~G~~t~~la~~~--------------~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~---D~~~ 145 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHLAQLM--------------KNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINA---DMRK 145 (274)
T ss_dssp TTCEEEETTCTTCHHHHHHHHHT--------------TTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES---CHHH
T ss_pred CcCEEEEeCCCccHHHHHHHHHc--------------CCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeC---ChHh
Confidence 34689999999999999887522 112589999998777666544432 112223443 4432
Q ss_pred ccC----CCCceeEEEecc---ceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEE
Q 037735 119 SLF----PKSSLHFVHSSY---TLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAAL 191 (329)
Q Consensus 119 ~lf----p~~s~dl~~Ss~---alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~ 191 (329)
-.. +++++|+|++.. .+..+.+.| .....-......+...+|+.-++.|+|||+|++
T Consensus 146 ~~~~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p----------------~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~ 209 (274)
T 3ajd_A 146 YKDYLLKNEIFFDKILLDAPCSGNIIKDKNR----------------NVSEEDIKYCSLRQKELIDIGIDLLKKDGELVY 209 (274)
T ss_dssp HHHHHHHTTCCEEEEEEEECCC----------------------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEE
T ss_pred cchhhhhccccCCEEEEcCCCCCCcccccCC----------------CCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence 222 367899998741 222222111 001111223345667899999999999999999
Q ss_pred Eeccc
Q 037735 192 VMFSV 196 (329)
Q Consensus 192 ~~~g~ 196 (329)
++...
T Consensus 210 stcs~ 214 (274)
T 3ajd_A 210 STCSM 214 (274)
T ss_dssp EESCC
T ss_pred EECCC
Confidence 98654
No 213
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=97.93 E-value=1.9e-05 Score=72.90 Aligned_cols=110 Identities=12% Similarity=-0.061 Sum_probs=72.1
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC-------CCCcceeeeccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL-------PQSRSYYAAGVP 113 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l-------~~~~~~f~~gvp 113 (329)
+++.+|||+|||+|..+..+++ + .+..+|...|+-.......-+.+ ...+--++.|..
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~--------~-------~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~ 138 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILK--------H-------PSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDG 138 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTT--------C-------TTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCS
T ss_pred CCCCEEEEECCchHHHHHHHHh--------C-------CCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcH
Confidence 4578999999999999888763 1 23358999999766555443333 122334555543
Q ss_pred cccccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEe
Q 037735 114 GSFYSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVM 193 (329)
Q Consensus 114 gsFy~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~ 193 (329)
..+.. .+++++|+|++....+|.. +..-+ -..|++...+.|+|||+|++..
T Consensus 139 ~~~l~--~~~~~fD~Ii~d~~~~~~~--~~~l~-------------------------~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 139 FMHIA--KSENQYDVIMVDSTEPVGP--AVNLF-------------------------TKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp HHHHH--TCCSCEEEEEESCSSCCSC--CCCCS-------------------------TTHHHHHHHHHEEEEEEEEEEC
T ss_pred HHHHh--hCCCCeeEEEECCCCCCCc--chhhh-------------------------HHHHHHHHHHhcCCCcEEEEEc
Confidence 33322 2468999999987766631 11100 0278999999999999999986
Q ss_pred c
Q 037735 194 F 194 (329)
Q Consensus 194 ~ 194 (329)
.
T Consensus 190 ~ 190 (275)
T 1iy9_A 190 D 190 (275)
T ss_dssp C
T ss_pred C
Confidence 3
No 214
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=97.93 E-value=2e-06 Score=79.93 Aligned_cols=99 Identities=14% Similarity=0.094 Sum_probs=61.1
Q ss_pred chHHHhHHHHHHHHHhHhhHHHHHhhcccCCCCCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecC
Q 037735 9 SYASNSAYQSIQVYILRYDPRTAVTDLGTNAVPNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFND 88 (329)
Q Consensus 9 sY~~nS~~Q~~~~~~~~~~l~~ai~~i~~~~~~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nD 88 (329)
+|.+|-..+..++..+...+. ..+..+|+|+|||+|.+|..+.+ + . .+|+..|
T Consensus 5 ~~gq~fl~d~~i~~~i~~~~~----------~~~~~~VLDiG~G~G~lt~~L~~--------~-------~--~~v~~vD 57 (285)
T 1zq9_A 5 GIGQHILKNPLIINSIIDKAA----------LRPTDVVLEVGPGTGNMTVKLLE--------K-------A--KKVVACE 57 (285)
T ss_dssp ---CCEECCHHHHHHHHHHTC----------CCTTCEEEEECCTTSTTHHHHHH--------H-------S--SEEEEEE
T ss_pred CCCcCccCCHHHHHHHHHhcC----------CCCCCEEEEEcCcccHHHHHHHh--------h-------C--CEEEEEE
Confidence 444444444555554443322 23457899999999999999875 1 1 3799999
Q ss_pred CCcchHHhhhhcCCC----CcceeeeccccccccccCCCCceeEEEeccceeccc
Q 037735 89 HSDNDFNTLFKSLPQ----SRSYYAAGVPGSFYSSLFPKSSLHFVHSSYTLHWLS 139 (329)
Q Consensus 89 Lp~ndfn~lf~~l~~----~~~~f~~gvpgsFy~~lfp~~s~dl~~Ss~alhWLs 139 (329)
+...+...+-+.+.. .+-.++.| ++.+--+| ++|+++++...||.+
T Consensus 58 ~~~~~~~~a~~~~~~~~~~~~v~~~~~---D~~~~~~~--~fD~vv~nlpy~~~~ 107 (285)
T 1zq9_A 58 LDPRLVAELHKRVQGTPVASKLQVLVG---DVLKTDLP--FFDTCVANLPYQISS 107 (285)
T ss_dssp SCHHHHHHHHHHHTTSTTGGGEEEEES---CTTTSCCC--CCSEEEEECCGGGHH
T ss_pred CCHHHHHHHHHHHHhcCCCCceEEEEc---ceecccch--hhcEEEEecCcccch
Confidence 987776655444321 11234443 56443344 799999999988865
No 215
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=97.92 E-value=1.4e-05 Score=78.84 Aligned_cols=127 Identities=12% Similarity=0.034 Sum_probs=74.4
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC---CCCcceeeecccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL---PQSRSYYAAGVPGSFYS 118 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l---~~~~~~f~~gvpgsFy~ 118 (329)
...+|+|+|||+|..|..+...+ ....+|+.+|........+-+++ .-..-.+..+ ++..
T Consensus 259 ~g~~VLDlgaG~G~~t~~la~~~--------------~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~---D~~~ 321 (450)
T 2yxl_A 259 PGETVVDLAAAPGGKTTHLAELM--------------KNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVK---DARK 321 (450)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHT--------------TTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECS---CTTC
T ss_pred CcCEEEEeCCCccHHHHHHHHHc--------------CCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEc---Chhh
Confidence 34689999999999999987522 11258999999887766654443 2112234444 3422
Q ss_pred cc--CCCCceeEEEe---ccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEe
Q 037735 119 SL--FPKSSLHFVHS---SYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVM 193 (329)
Q Consensus 119 ~l--fp~~s~dl~~S---s~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~ 193 (329)
-. ++++++|+|++ .+.+.-+.+.|...|. .++..+.. ....-..+|..-++-|+|||.|++++
T Consensus 322 ~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~-------~~~~~~~~-----l~~~q~~iL~~a~~~LkpGG~lvy~t 389 (450)
T 2yxl_A 322 APEIIGEEVADKVLLDAPCTSSGTIGKNPELRWR-------LREDKINE-----MSQLQRELLESAARLVKPGGRLLYTT 389 (450)
T ss_dssp CSSSSCSSCEEEEEEECCCCCGGGTTTSTTHHHH-------CCTTSHHH-----HHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred cchhhccCCCCEEEEcCCCCCCeeeccChhhhhh-------CCHHHHHH-----HHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 22 55688999996 2233333333321010 01111111 11111478999999999999999998
Q ss_pred cccC
Q 037735 194 FSVP 197 (329)
Q Consensus 194 ~g~~ 197 (329)
+...
T Consensus 390 cs~~ 393 (450)
T 2yxl_A 390 CSIF 393 (450)
T ss_dssp SCCC
T ss_pred CCCC
Confidence 7543
No 216
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=97.89 E-value=4.7e-06 Score=74.99 Aligned_cols=105 Identities=11% Similarity=0.106 Sum_probs=68.0
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC---CCC-cceeeeccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL---PQS-RSYYAAGVPGSFY 117 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l---~~~-~~~f~~gvpgsFy 117 (329)
++.+|+|+|||+|..|..+...+ ++..+++..|.........-+.+ +-. +--+..|....+.
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~--------------~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l 135 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSI--------------PDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLAL 135 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHS--------------CTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHHhC--------------CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH
Confidence 45799999999999999987522 22468999999766555443332 111 1234444322221
Q ss_pred cccC----CCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEe
Q 037735 118 SSLF----PKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVM 193 (329)
Q Consensus 118 ~~lf----p~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~ 193 (329)
..+. +++++|++++.. |. .+...||+...+-|+|||++++..
T Consensus 136 ~~l~~~~~~~~~fD~I~~d~---~~-------------------------------~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 136 DNLLQGQESEGSYDFGFVDA---DK-------------------------------PNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp HHHHHSTTCTTCEEEEEECS---CG-------------------------------GGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHHHhccCCCCCcCEEEECC---ch-------------------------------HHHHHHHHHHHHhcCCCeEEEEec
Confidence 2221 367899999742 21 134578889999999999999865
Q ss_pred c
Q 037735 194 F 194 (329)
Q Consensus 194 ~ 194 (329)
.
T Consensus 182 ~ 182 (237)
T 3c3y_A 182 T 182 (237)
T ss_dssp T
T ss_pred C
Confidence 4
No 217
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=97.88 E-value=2.4e-05 Score=76.68 Aligned_cols=125 Identities=16% Similarity=0.138 Sum_probs=77.1
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC--Ccceeeeccccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ--SRSYYAAGVPGSFYSS 119 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~--~~~~f~~gvpgsFy~~ 119 (329)
+..+|+|+|||+|..|..+.+.. +..+|+.+|........+-+++.. ....+..+ ++..-
T Consensus 246 ~g~~VLDlgaG~G~~t~~la~~~---------------~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~---D~~~~ 307 (429)
T 1sqg_A 246 NGEHILDLCAAPGGKTTHILEVA---------------PEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQG---DGRYP 307 (429)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHC---------------TTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEEC---CTTCT
T ss_pred CcCeEEEECCCchHHHHHHHHHc---------------CCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeC---chhhc
Confidence 34689999999999999987521 225899999988777666544321 11234444 34222
Q ss_pred c--CCCCceeEEEe---ccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEec
Q 037735 120 L--FPKSSLHFVHS---SYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMF 194 (329)
Q Consensus 120 l--fp~~s~dl~~S---s~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~ 194 (329)
. ++++++|+|++ ++....+.+.|...| ..++..+.+ ..+....+|..-++-|+|||+|+++++
T Consensus 308 ~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~-------~~~~~~~~~-----l~~~q~~~L~~a~~~LkpGG~lvystc 375 (429)
T 1sqg_A 308 SQWCGEQQFDRILLDAPCSATGVIRRHPDIKW-------LRRDRDIPE-----LAQLQSEILDAIWPHLKTGGTLVYATC 375 (429)
T ss_dssp HHHHTTCCEEEEEEECCCCCGGGTTTCTTHHH-------HCCTTHHHH-----HHHHHHHHHHHHGGGEEEEEEEEEEES
T ss_pred hhhcccCCCCEEEEeCCCCcccccCCCcchhh-------cCCHHHHHH-----HHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 2 56789999997 334444444442211 011111111 112234789999999999999999986
Q ss_pred cc
Q 037735 195 SV 196 (329)
Q Consensus 195 g~ 196 (329)
..
T Consensus 376 s~ 377 (429)
T 1sqg_A 376 SV 377 (429)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 218
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=97.87 E-value=1.7e-05 Score=75.13 Aligned_cols=107 Identities=9% Similarity=-0.025 Sum_probs=71.5
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC-------Ccceeeeccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ-------SRSYYAAGVP 113 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~-------~~~~f~~gvp 113 (329)
+++.+|+|+|||+|..+..+.+ . .|..+++..|+........-+.++. .+--+..+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~--------~-------~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~-- 177 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCK--------Y-------KSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIE-- 177 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTT--------C-------TTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEES--
T ss_pred CCCCEEEEEcCCccHHHHHHHH--------c-------CCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEc--
Confidence 4568999999999999988863 1 2346899999987666555444432 12234444
Q ss_pred ccccccc-CCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcH--HHHHHHHHHHhccCceEE
Q 037735 114 GSFYSSL-FPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDF--QTFLNTRAQELVPGGLAA 190 (329)
Q Consensus 114 gsFy~~l-fp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~--~~FL~~ra~eL~pGG~l~ 190 (329)
+..+-+ .+++++|+|++...-+|- |. .++ ..|++...+.|+|||+|+
T Consensus 178 -D~~~~l~~~~~~fDvIi~d~~~p~~---~~--------------------------~~l~~~~~l~~~~~~LkpgG~lv 227 (321)
T 2pt6_A 178 -DASKFLENVTNTYDVIIVDSSDPIG---PA--------------------------ETLFNQNFYEKIYNALKPNGYCV 227 (321)
T ss_dssp -CHHHHHHHCCSCEEEEEEECCCSSS---GG--------------------------GGGSSHHHHHHHHHHEEEEEEEE
T ss_pred -cHHHHHhhcCCCceEEEECCcCCCC---cc--------------------------hhhhHHHHHHHHHHhcCCCcEEE
Confidence 332222 246889999997654441 10 111 478999999999999999
Q ss_pred EEec
Q 037735 191 LVMF 194 (329)
Q Consensus 191 ~~~~ 194 (329)
+...
T Consensus 228 ~~~~ 231 (321)
T 2pt6_A 228 AQCE 231 (321)
T ss_dssp EEEC
T ss_pred EEcC
Confidence 9863
No 219
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=97.86 E-value=3e-05 Score=68.92 Aligned_cols=98 Identities=15% Similarity=0.223 Sum_probs=66.2
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC---CC-Ccceeeeccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL---PQ-SRSYYAAGVPGSFY 117 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l---~~-~~~~f~~gvpgsFy 117 (329)
...+|+|+|||+|..+..+.+. ..+++..|+........-+.+ .- .+.-+.. +++.
T Consensus 91 ~~~~vldiG~G~G~~~~~l~~~-----------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~---~d~~ 150 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLSEV-----------------AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFN---VDFK 150 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH-----------------SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEEC---SCTT
T ss_pred CCCEEEEeCCCccHHHHHHHHh-----------------CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEE---cChh
Confidence 4569999999999999988751 147999999876655543332 11 1122333 3564
Q ss_pred cccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecc
Q 037735 118 SSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFS 195 (329)
Q Consensus 118 ~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g 195 (329)
+.+++++++|++++. +|. ...+|+...+.|+|||++++....
T Consensus 151 ~~~~~~~~~D~v~~~--------~~~----------------------------~~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 151 DAEVPEGIFHAAFVD--------VRE----------------------------PWHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp TSCCCTTCBSEEEEC--------SSC----------------------------GGGGHHHHHHHBCTTCEEEEEESS
T ss_pred hcccCCCcccEEEEC--------CcC----------------------------HHHHHHHHHHHcCCCCEEEEEeCC
Confidence 433377899999973 221 124588889999999999998843
No 220
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=97.82 E-value=2.8e-05 Score=77.60 Aligned_cols=126 Identities=13% Similarity=0.083 Sum_probs=77.8
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC---CCcceeeecccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP---QSRSYYAAGVPGSFYS 118 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~---~~~~~f~~gvpgsFy~ 118 (329)
...+|+|+|||+|..|..+.+.+ .+..+|+.+|+.......+-+++. -..-.++.+....+
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~--------------~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~-- 180 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARM--------------NNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVF-- 180 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHT--------------TTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTH--
T ss_pred CCCEEEEeCCCCCHHHHHHHHhC--------------CCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHh--
Confidence 45799999999999999987522 223589999999887777655442 11123444432222
Q ss_pred ccC-CCCceeEEEe---ccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEec
Q 037735 119 SLF-PKSSLHFVHS---SYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMF 194 (329)
Q Consensus 119 ~lf-p~~s~dl~~S---s~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~ 194 (329)
.. +++++|.|++ ++...-+.+.|...|. -++..+.+ ....-..+|..-++-|+|||+|++++.
T Consensus 181 -~~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~-------~~~~~~~~-----l~~~q~~iL~~a~~~LkpGG~LvysTc 247 (479)
T 2frx_A 181 -GAAVPEMFDAILLDAPCSGEGVVRKDPDALKN-------WSPESNQE-----IAATQRELIDSAFHALRPGGTLVYSTC 247 (479)
T ss_dssp -HHHSTTCEEEEEEECCCCCGGGGGTCTTSSSS-------CCHHHHHH-----HHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred -hhhccccCCEEEECCCcCCcccccCCHHHHhh-------cCHhHHHH-----HHHHHHHHHHHHHHhcCCCCEEEEecc
Confidence 11 4678999997 3444434444433110 01111211 112224789999999999999999987
Q ss_pred cc
Q 037735 195 SV 196 (329)
Q Consensus 195 g~ 196 (329)
..
T Consensus 248 s~ 249 (479)
T 2frx_A 248 TL 249 (479)
T ss_dssp CC
T ss_pred cC
Confidence 54
No 221
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=97.81 E-value=9.3e-06 Score=71.62 Aligned_cols=102 Identities=13% Similarity=0.127 Sum_probs=66.0
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC---CC-Ccceeeeccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL---PQ-SRSYYAAGVPGSFY 117 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l---~~-~~~~f~~gvpgsFy 117 (329)
+..+|+|+|||+|..|..+...+ .+..+++..|+........-+.+ .. .+--+..| ++.
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~--------------~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~---d~~ 131 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALAL--------------PADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLK---PAL 131 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTS--------------CTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEES---CHH
T ss_pred CCCEEEEEcCCccHHHHHHHHhC--------------CCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEc---CHH
Confidence 45799999999999998887411 12468999999766555443332 11 12234444 343
Q ss_pred cc---cCCC---CceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEE
Q 037735 118 SS---LFPK---SSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAAL 191 (329)
Q Consensus 118 ~~---lfp~---~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~ 191 (329)
+. +... +++|++++... . .+...+++...+-|+|||++++
T Consensus 132 ~~~~~~~~~~~~~~~D~v~~d~~--------~--------------------------~~~~~~l~~~~~~L~pgG~lv~ 177 (229)
T 2avd_A 132 ETLDELLAAGEAGTFDVAVVDAD--------K--------------------------ENCSAYYERCLQLLRPGGILAV 177 (229)
T ss_dssp HHHHHHHHTTCTTCEEEEEECSC--------S--------------------------TTHHHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHhcCCCCCccEEEECCC--------H--------------------------HHHHHHHHHHHHHcCCCeEEEE
Confidence 22 2111 78999998432 1 1345788899999999999998
Q ss_pred Eec
Q 037735 192 VMF 194 (329)
Q Consensus 192 ~~~ 194 (329)
...
T Consensus 178 ~~~ 180 (229)
T 2avd_A 178 LRV 180 (229)
T ss_dssp ECC
T ss_pred ECC
Confidence 654
No 222
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=97.79 E-value=2.1e-05 Score=70.24 Aligned_cols=106 Identities=12% Similarity=0.120 Sum_probs=66.7
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC---CC-Ccceeeeccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL---PQ-SRSYYAAGVPGSFY 117 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l---~~-~~~~f~~gvpgsFy 117 (329)
++.+|+|+|||+|..|..+.. .+ .+..+++..|.........-+.+ .- .+--+..|....+.
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~--------~~------~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l 137 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMAL--------QL------PPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATL 137 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHT--------TS------CTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHH
T ss_pred CCCEEEEecCCCCHHHHHHHH--------hC------CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH
Confidence 356999999999999998874 11 22358999999765544433222 11 11234444221222
Q ss_pred ccc-CCC--CceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEec
Q 037735 118 SSL-FPK--SSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMF 194 (329)
Q Consensus 118 ~~l-fp~--~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~ 194 (329)
..+ +++ +++|++++... . .++..+|+...+-|+|||++++...
T Consensus 138 ~~l~~~~~~~~fD~V~~d~~---~-------------------------------~~~~~~l~~~~~~LkpgG~lv~~~~ 183 (232)
T 3cbg_A 138 EQLTQGKPLPEFDLIFIDAD---K-------------------------------RNYPRYYEIGLNLLRRGGLMVIDNV 183 (232)
T ss_dssp HHHHTSSSCCCEEEEEECSC---G-------------------------------GGHHHHHHHHHHTEEEEEEEEEECT
T ss_pred HHHHhcCCCCCcCEEEECCC---H-------------------------------HHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 222 223 78999987532 1 1445788899999999999999755
Q ss_pred c
Q 037735 195 S 195 (329)
Q Consensus 195 g 195 (329)
.
T Consensus 184 ~ 184 (232)
T 3cbg_A 184 L 184 (232)
T ss_dssp T
T ss_pred C
Confidence 3
No 223
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=97.78 E-value=8.6e-06 Score=71.18 Aligned_cols=101 Identities=12% Similarity=0.058 Sum_probs=65.7
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC---C-cceeeeccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ---S-RSYYAAGVPGSFY 117 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~---~-~~~f~~gvpgsFy 117 (329)
++.+|+|+|||+|..|..+.. .. .+..+|+..|+........-+.+.. . +--+..| ++.
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~--------~~------~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~---d~~ 118 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFAR--------AI------SISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVG---DPL 118 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHT--------TS------CTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEES---CHH
T ss_pred CCCEEEEEcCCccHHHHHHHH--------hC------CCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEe---cHH
Confidence 356999999999999998874 11 1146899999987665544333211 1 1224444 443
Q ss_pred ccc-CCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEec
Q 037735 118 SSL-FPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMF 194 (329)
Q Consensus 118 ~~l-fp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~ 194 (329)
+.+ .+++ +|++++... . .+...+|+...+-|+|||++++...
T Consensus 119 ~~~~~~~~-fD~v~~~~~--------~--------------------------~~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 119 GIAAGQRD-IDILFMDCD--------V--------------------------FNGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp HHHTTCCS-EEEEEEETT--------T--------------------------SCHHHHHHHHGGGEEEEEEEEEESS
T ss_pred HHhccCCC-CCEEEEcCC--------h--------------------------hhhHHHHHHHHHhcCCCeEEEEECc
Confidence 322 2346 999987621 1 1445789999999999999998543
No 224
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=97.77 E-value=0.00012 Score=70.49 Aligned_cols=122 Identities=14% Similarity=0.214 Sum_probs=72.1
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeeccccccccccC
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSSLF 121 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~lf 121 (329)
+..+|+|+|||+|..+..+.+.. .+..+++..|+-....... . +.-+.. +++.. ..
T Consensus 39 ~~~~vLD~gcGtG~~~~~~~~~~--------------~~~~~i~gvDi~~~~~~~a-----~-~~~~~~---~D~~~-~~ 94 (421)
T 2ih2_A 39 RGGRVLEPACAHGPFLRAFREAH--------------GTAYRFVGVEIDPKALDLP-----P-WAEGIL---ADFLL-WE 94 (421)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHH--------------CSCSEEEEEESCTTTCCCC-----T-TEEEEE---SCGGG-CC
T ss_pred CCCEEEECCCCChHHHHHHHHHh--------------CCCCeEEEEECCHHHHHhC-----C-CCcEEe---CChhh-cC
Confidence 34599999999999988887522 1335889999865443322 1 122333 35543 34
Q ss_pred CCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHh------hcHHHHHHHHHHHhccCceEEEEecc
Q 037735 122 PKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFN------NDFQTFLNTRAQELVPGGLAALVMFS 195 (329)
Q Consensus 122 p~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~------~D~~~FL~~ra~eL~pGG~l~~~~~g 195 (329)
+.+++|+|+++=-........ .. ....+++..+.|...+. ..+..|++.-.+-|+|||++++.+..
T Consensus 95 ~~~~fD~Ii~NPPy~~~~~~~-------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 95 PGEAFDLILGNPPYGIVGEAS-------KY-PIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp CSSCEEEEEECCCCCCBSCTT-------TC-SBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred ccCCCCEEEECcCccCccccc-------cc-ccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 567899999962222111100 00 00012344444433211 13568999999999999999999864
No 225
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=97.77 E-value=1.2e-05 Score=79.95 Aligned_cols=126 Identities=11% Similarity=0.038 Sum_probs=75.8
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC--Ccceeeeccccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ--SRSYYAAGVPGSFYSS 119 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~--~~~~f~~gvpgsFy~~ 119 (329)
+..+|+|+|||+|..|..+.+.+ ....+|+.+|+.......+-+++.. ....++.+ +...-
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA~~~--------------~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~---Da~~l 163 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLAARM--------------GGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQA---PPRAL 163 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHT--------------TTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECS---CHHHH
T ss_pred CCCEEEEEcCCcCHHHHHHHHhC--------------CCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEEC---CHHHh
Confidence 45799999999999999998622 1225899999988777766554421 11234444 33221
Q ss_pred c-CCCCceeEEEe---ccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecc
Q 037735 120 L-FPKSSLHFVHS---SYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFS 195 (329)
Q Consensus 120 l-fp~~s~dl~~S---s~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g 195 (329)
. ++++++|+|++ .+..--+.+.|...| ..++..+.+. .+.-..+|..-++-|+|||+|+.++..
T Consensus 164 ~~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~-------~~~~~~~~~l-----~~~Q~~iL~~a~~~LkpGG~LvysTCs 231 (464)
T 3m6w_A 164 AEAFGTYFHRVLLDAPCSGEGMFRKDREAAR-------HWGPSAPKRM-----AEVQKALLAQASRLLGPGGVLVYSTCT 231 (464)
T ss_dssp HHHHCSCEEEEEEECCCCCGGGTTTCTTSGG-------GCCTTHHHHH-----HHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred hhhccccCCEEEECCCcCCccccccChHHhh-------hcCHHHHHHH-----HHHHHHHHHHHHHhcCCCcEEEEEecc
Confidence 2 24688999985 122222222332201 1112222211 122357899999999999999999865
Q ss_pred c
Q 037735 196 V 196 (329)
Q Consensus 196 ~ 196 (329)
.
T Consensus 232 ~ 232 (464)
T 3m6w_A 232 F 232 (464)
T ss_dssp C
T ss_pred C
Confidence 3
No 226
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=97.75 E-value=3.7e-05 Score=73.11 Aligned_cols=113 Identities=15% Similarity=0.185 Sum_probs=70.6
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC-----CCcceeeecccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP-----QSRSYYAAGVPGSF 116 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~-----~~~~~f~~gvpgsF 116 (329)
+..+|||+|||+|..|+.+.. . . .+|+..|+.......+-+++. ..+--|+.+ ++
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~--------~-------g--a~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~---D~ 212 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAA--------A-------G--AEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICE---DA 212 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHH--------T-------T--CEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECS---CH
T ss_pred CCCcEEEcccccCHHHHHHHH--------c-------C--CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEEC---cH
Confidence 346899999999999998874 1 1 379999998766665544321 101235554 44
Q ss_pred ccccC----CCCceeEEEeccceecccCCCCC-CCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEE
Q 037735 117 YSSLF----PKSSLHFVHSSYTLHWLSKVPKV-DGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAAL 191 (329)
Q Consensus 117 y~~lf----p~~s~dl~~Ss~alhWLs~~p~~-~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~ 191 (329)
.+-+. ..+++|+|++. +|.- ...++.++ ...+|+..+|+...+.|+|||++++
T Consensus 213 ~~~l~~~~~~~~~fD~Ii~d--------PP~~~~~~~~~~~--------------~~~~~~~~ll~~~~~~LkpgG~lli 270 (332)
T 2igt_A 213 MKFIQREERRGSTYDIILTD--------PPKFGRGTHGEVW--------------QLFDHLPLMLDICREILSPKALGLV 270 (332)
T ss_dssp HHHHHHHHHHTCCBSEEEEC--------CCSEEECTTCCEE--------------EHHHHHHHHHHHHHHTBCTTCCEEE
T ss_pred HHHHHHHHhcCCCceEEEEC--------CccccCCchHHHH--------------HHHHHHHHHHHHHHHhcCcCcEEEE
Confidence 33221 15789999984 2211 00000011 1234667899999999999999888
Q ss_pred Eeccc
Q 037735 192 VMFSV 196 (329)
Q Consensus 192 ~~~g~ 196 (329)
.....
T Consensus 271 ~~~~~ 275 (332)
T 2igt_A 271 LTAYS 275 (332)
T ss_dssp EEECC
T ss_pred EECCC
Confidence 77553
No 227
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=97.75 E-value=3.8e-05 Score=70.63 Aligned_cols=94 Identities=6% Similarity=-0.061 Sum_probs=63.8
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC-------Ccceeeeccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ-------SRSYYAAGVP 113 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~-------~~~~f~~gvp 113 (329)
+++.+|||+|||+|..+..++. .+ .+++..|+-.......-+.++. .+--+..|.+
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~----------------~~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~ 133 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFK----------------YD-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLL 133 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTT----------------SS-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGG
T ss_pred CCCCEEEEEeCCcCHHHHHHHh----------------CC-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechH
Confidence 4567999999999998877763 23 4899999976655544333332 1223444443
Q ss_pred cccccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEe
Q 037735 114 GSFYSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVM 193 (329)
Q Consensus 114 gsFy~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~ 193 (329)
..| + +++|+|++.. + .| ..|++...+.|+|||+|++..
T Consensus 134 ~~~-----~-~~fD~Ii~d~-----~-dp------------------------------~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 134 DLD-----I-KKYDLIFCLQ-----E-PD------------------------------IHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp GSC-----C-CCEEEEEESS-----C-CC------------------------------HHHHHHHHTTEEEEEEEEEEE
T ss_pred HHH-----H-hhCCEEEECC-----C-Ch------------------------------HHHHHHHHHhcCCCcEEEEEc
Confidence 222 2 7899999862 1 12 138999999999999999974
No 228
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=97.71 E-value=5.1e-05 Score=70.38 Aligned_cols=117 Identities=19% Similarity=0.168 Sum_probs=67.3
Q ss_pred ceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC---CC-cceeeecccccccc
Q 037735 43 TFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP---QS-RSYYAAGVPGSFYS 118 (329)
Q Consensus 43 ~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~---~~-~~~f~~gvpgsFy~ 118 (329)
..+|+|+|||+|..+..+.. . |..+|+..|+........-++.. -. +--|..+ ++.+
T Consensus 124 ~~~vLDlG~GsG~~~~~la~--------~--------~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~---D~~~ 184 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSVAK--------F--------SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKG---EFLE 184 (284)
T ss_dssp CCEEEEESCTTSHHHHHHHH--------H--------SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEES---STTG
T ss_pred CCEEEEEeCchhHHHHHHHH--------C--------CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEEC---cchh
Confidence 36899999999999988874 1 23689999998766655444321 11 1334544 4544
Q ss_pred ccCCCCce---eEEEeccceecccC-CCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHH-HHhccCceEEEEe
Q 037735 119 SLFPKSSL---HFVHSSYTLHWLSK-VPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRA-QELVPGGLAALVM 193 (329)
Q Consensus 119 ~lfp~~s~---dl~~Ss~alhWLs~-~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra-~eL~pGG~l~~~~ 193 (329)
.++ +++ |+|+|+--...... ++.. +. ..|.. +.+ ...|-..|++..+ +.|+|||+|++.+
T Consensus 185 -~~~-~~f~~~D~IvsnPPyi~~~~~l~~~------v~--~ep~~--al~---~~~dgl~~~~~i~~~~l~pgG~l~~e~ 249 (284)
T 1nv8_A 185 -PFK-EKFASIEMILSNPPYVKSSAHLPKD------VL--FEPPE--ALF---GGEDGLDFYREFFGRYDTSGKIVLMEI 249 (284)
T ss_dssp -GGG-GGTTTCCEEEECCCCBCGGGSCTTS------CC--CSCHH--HHB---CTTTSCHHHHHHHHHCCCTTCEEEEEC
T ss_pred -hcc-cccCCCCEEEEcCCCCCcccccChh------hc--cCcHH--Hhc---CCCcHHHHHHHHHHhcCCCCCEEEEEE
Confidence 233 578 99999732222111 1100 00 00000 000 0112236788888 9999999999854
No 229
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=97.68 E-value=8.7e-05 Score=68.18 Aligned_cols=103 Identities=12% Similarity=0.027 Sum_probs=69.6
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC--C-Ccceeeecccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP--Q-SRSYYAAGVPGSFYS 118 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~--~-~~~~f~~gvpgsFy~ 118 (329)
+..+|+|+|||+|..|+.+.. + .+..+|+..|+.......+-+++. . ....|+.|. +.+
T Consensus 119 ~~~~VLDlgcG~G~~s~~la~--------~-------~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d---~~~ 180 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLAK--------Y-------SKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILAD---NRD 180 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHHH--------H-------TCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESC---GGG
T ss_pred CCCEEEEecCcCCHHHHHHHH--------h-------CCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECC---hHH
Confidence 457899999999999999875 2 122589999998766665544331 1 123456654 432
Q ss_pred ccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCC
Q 037735 119 SLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPD 198 (329)
Q Consensus 119 ~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~ 198 (329)
- -..+++|++++.... +...++....+.|+|||+++++.....+
T Consensus 181 ~-~~~~~~D~Vi~d~p~-----------------------------------~~~~~l~~~~~~LkpgG~l~~s~~~~~~ 224 (272)
T 3a27_A 181 V-ELKDVADRVIMGYVH-----------------------------------KTHKFLDKTFEFLKDRGVIHYHETVAEK 224 (272)
T ss_dssp C-CCTTCEEEEEECCCS-----------------------------------SGGGGHHHHHHHEEEEEEEEEEEEEEGG
T ss_pred c-CccCCceEEEECCcc-----------------------------------cHHHHHHHHHHHcCCCCEEEEEEcCccc
Confidence 2 115789999875322 2235688888999999999999887543
No 230
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=97.61 E-value=7.2e-05 Score=74.62 Aligned_cols=101 Identities=16% Similarity=0.136 Sum_probs=62.5
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC---CC-Ccceeeeccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL---PQ-SRSYYAAGVPGSFY 117 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l---~~-~~~~f~~gvpgsFy 117 (329)
+..+|+|+|||+|..++.+.. .+..+|+..|+.. +....-+.+ .- .+--++.| ++.
T Consensus 158 ~~~~VLDiGcGtG~la~~la~----------------~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~---d~~ 217 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQ----------------AGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPG---KVE 217 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHH----------------TTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEES---CTT
T ss_pred CCCEEEEecCcccHHHHHHHH----------------cCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEEC---chh
Confidence 457999999999998876653 2235899999865 543332221 11 12234443 554
Q ss_pred cccCCCCceeEEEecccee-cccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEe
Q 037735 118 SSLFPKSSLHFVHSSYTLH-WLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVM 193 (329)
Q Consensus 118 ~~lfp~~s~dl~~Ss~alh-WLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~ 193 (329)
+-.+| +++|+|+|+..++ |.. .++...|....+.|+|||+|++..
T Consensus 218 ~~~~~-~~fD~Ivs~~~~~~~~~------------------------------e~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 218 EVSLP-EQVDIIISEPMGYMLFN------------------------------ERMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp TCCCS-SCEEEEECCCCHHHHTC------------------------------HHHHHHHHHGGGGEEEEEEEESCE
T ss_pred hCccC-CCeEEEEEeCchHhcCc------------------------------HHHHHHHHHHHHhcCCCCEEEEEe
Confidence 42334 6899999987643 421 122344555668999999998543
No 231
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=97.57 E-value=2.4e-05 Score=72.48 Aligned_cols=84 Identities=12% Similarity=0.058 Sum_probs=57.9
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC--CCcceeeecccccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP--QSRSYYAAGVPGSFYS 118 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~--~~~~~f~~gvpgsFy~ 118 (329)
+.+.+|+|+|||+|+++..++. ..|..+++..|.-..+..-+-..+. ....-+..+ ++-.
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~---------------~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~---D~~~ 192 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMG---------------LPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVA---DLLE 192 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTT---------------CCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEEC---CTTT
T ss_pred CCCceeeeeccCccHHHHHHHh---------------hCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEe---eecc
Confidence 4588999999999999999874 1466899999998765554433321 111112221 3423
Q ss_pred ccCCCCceeEEEeccceecccCCCC
Q 037735 119 SLFPKSSLHFVHSSYTLHWLSKVPK 143 (329)
Q Consensus 119 ~lfp~~s~dl~~Ss~alhWLs~~p~ 143 (329)
. .|+...|++.++-++|-|.+-..
T Consensus 193 ~-~p~~~~DvaL~lkti~~Le~q~k 216 (281)
T 3lcv_B 193 D-RLDEPADVTLLLKTLPCLETQQR 216 (281)
T ss_dssp S-CCCSCCSEEEETTCHHHHHHHST
T ss_pred c-CCCCCcchHHHHHHHHHhhhhhh
Confidence 3 37788999999999999976543
No 232
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=97.56 E-value=9.7e-05 Score=67.61 Aligned_cols=96 Identities=11% Similarity=-0.014 Sum_probs=62.7
Q ss_pred HhhHHHHHhhcccCCCCCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC--
Q 037735 25 RYDPRTAVTDLGTNAVPNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP-- 102 (329)
Q Consensus 25 ~~~l~~ai~~i~~~~~~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~-- 102 (329)
+|.++.-...+... ..+.+|+|+|||+|+++..++ |...++..|+....-+.+-+.+.
T Consensus 90 Lp~ld~fY~~i~~~--~~p~~VLDlGCG~gpLal~~~------------------~~~~y~a~DId~~~i~~ar~~~~~~ 149 (253)
T 3frh_A 90 LAELDTLYDFIFSA--ETPRRVLDIACGLNPLALYER------------------GIASVWGCDIHQGLGDVITPFAREK 149 (253)
T ss_dssp GGGHHHHHHHHTSS--CCCSEEEEETCTTTHHHHHHT------------------TCSEEEEEESBHHHHHHHHHHHHHT
T ss_pred hhhHHHHHHHHhcC--CCCCeEEEecCCccHHHHHhc------------------cCCeEEEEeCCHHHHHHHHHHHHhc
Confidence 45555443333222 457899999999999988875 23689999998776665533321
Q ss_pred CCcceeeeccccccccccCCCCceeEEEeccceecccCCCCC
Q 037735 103 QSRSYYAAGVPGSFYSSLFPKSSLHFVHSSYTLHWLSKVPKV 144 (329)
Q Consensus 103 ~~~~~f~~gvpgsFy~~lfp~~s~dl~~Ss~alhWLs~~p~~ 144 (329)
..+.-|.. +++.... |+.+.|++.++-++|-|.+....
T Consensus 150 g~~~~~~v---~D~~~~~-~~~~~DvvLllk~lh~LE~q~~~ 187 (253)
T 3frh_A 150 DWDFTFAL---QDVLCAP-PAEAGDLALIFKLLPLLEREQAG 187 (253)
T ss_dssp TCEEEEEE---CCTTTSC-CCCBCSEEEEESCHHHHHHHSTT
T ss_pred CCCceEEE---eecccCC-CCCCcchHHHHHHHHHhhhhchh
Confidence 11112232 2454444 55699999999999999876543
No 233
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=97.56 E-value=0.00034 Score=63.10 Aligned_cols=126 Identities=9% Similarity=0.036 Sum_probs=82.2
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC---C-cceeeecccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ---S-RSYYAAGVPGSF 116 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~---~-~~~f~~gvpgsF 116 (329)
++..+|+|+|||||..++.+.. . .|..+|+..|.........-+++.. . +--+..| +.
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~--------~-------~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~---d~ 75 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVE--------R-------GQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLA---NG 75 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHH--------T-------TSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEEC---SG
T ss_pred CCCCEEEEeCCCcHHHHHHHHH--------h-------CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEEC---ch
Confidence 3457999999999999999875 2 3445899999987776665554321 1 1223333 44
Q ss_pred ccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEeccc
Q 037735 117 YSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSV 196 (329)
Q Consensus 117 y~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~ 196 (329)
++.+-|...+|+++.+-. ..+ -+..+|....+-|+|||+|+++-.
T Consensus 76 l~~l~~~~~~D~IviaG~----------------------Gg~-----------~i~~Il~~~~~~L~~~~~lVlq~~-- 120 (225)
T 3kr9_A 76 LAAFEETDQVSVITIAGM----------------------GGR-----------LIARILEEGLGKLANVERLILQPN-- 120 (225)
T ss_dssp GGGCCGGGCCCEEEEEEE----------------------CHH-----------HHHHHHHHTGGGCTTCCEEEEEES--
T ss_pred hhhcccCcCCCEEEEcCC----------------------ChH-----------HHHHHHHHHHHHhCCCCEEEEECC--
Confidence 444433335887775311 001 134788888899999999998653
Q ss_pred CCCCcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEe
Q 037735 197 PDGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKM 258 (329)
Q Consensus 197 ~~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~ 258 (329)
+ ..++++.++.+. +|+|.....+
T Consensus 121 -~-------------------------------------~~~~vr~~L~~~-Gf~i~~e~lv 143 (225)
T 3kr9_A 121 -N-------------------------------------REDDLRIWLQDH-GFQIVAESIL 143 (225)
T ss_dssp -S-------------------------------------CHHHHHHHHHHT-TEEEEEEEEE
T ss_pred -C-------------------------------------CHHHHHHHHHHC-CCEEEEEEEE
Confidence 1 156778888877 4888776543
No 234
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=97.54 E-value=6.8e-05 Score=74.43 Aligned_cols=126 Identities=11% Similarity=0.073 Sum_probs=76.0
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC---CCcceeeecccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP---QSRSYYAAGVPGSFYS 118 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~---~~~~~f~~gvpgsFy~ 118 (329)
...+|+|+|||+|..|..+...+ ....+|+.+|+.......+-+++. -....+..+.+..+-.
T Consensus 105 ~g~~VLDlcaGpGgkt~~lA~~~--------------~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~ 170 (456)
T 3m4x_A 105 PGEKVLDLCAAPGGKSTQLAAQM--------------KGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVP 170 (456)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHH--------------TTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHH
T ss_pred CCCEEEEECCCcCHHHHHHHHHc--------------CCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhh
Confidence 45799999999999999997633 223589999998877666654432 1122344443322211
Q ss_pred ccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHH----HHHHHhhcHHHHHHHHHHHhccCceEEEEec
Q 037735 119 SLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEA----YAAQFNNDFQTFLNTRAQELVPGGLAALVMF 194 (329)
Q Consensus 119 ~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~a----y~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~ 194 (329)
.+++++|+|++ ++|++. -|.+ ...|+.... ........-..+|..-++-|+|||+|+.++.
T Consensus 171 --~~~~~FD~Il~--------DaPCSg--~G~~---rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTC 235 (456)
T 3m4x_A 171 --HFSGFFDRIVV--------DAPCSG--EGMF---RKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTC 235 (456)
T ss_dssp --HHTTCEEEEEE--------ECCCCC--GGGT---TTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEES
T ss_pred --hccccCCEEEE--------CCCCCC--cccc---ccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 23578999976 466550 0000 011222110 1112222335889999999999999999987
Q ss_pred cc
Q 037735 195 SV 196 (329)
Q Consensus 195 g~ 196 (329)
..
T Consensus 236 s~ 237 (456)
T 3m4x_A 236 TF 237 (456)
T ss_dssp CC
T ss_pred ec
Confidence 53
No 235
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=97.51 E-value=6.5e-06 Score=74.36 Aligned_cols=113 Identities=13% Similarity=0.111 Sum_probs=64.2
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcc-eeeeccccccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRS-YYAAGVPGSFYSS 119 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~-~f~~gvpgsFy~~ 119 (329)
.+..+|+|+|||+|..|..+.. + . .+|+..|+.......+-+.+....+ .++. +++.+-
T Consensus 28 ~~~~~VLDiG~G~G~~~~~l~~--------~-------~--~~v~~id~~~~~~~~a~~~~~~~~~v~~~~---~D~~~~ 87 (245)
T 1yub_A 28 KETDTVYEIGTGKGHLTTKLAK--------I-------S--KQVTSIELDSHLFNLSSEKLKLNTRVTLIH---QDILQF 87 (245)
T ss_dssp CSSEEEEECSCCCSSCSHHHHH--------H-------S--SEEEESSSSCSSSSSSSCTTTTCSEEEECC---SCCTTT
T ss_pred CCCCEEEEEeCCCCHHHHHHHH--------h-------C--CeEEEEECCHHHHHHHHHHhccCCceEEEE---CChhhc
Confidence 3457899999999999999875 2 1 3789999876554443333321112 2333 466544
Q ss_pred cCCC-CceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHH----HHHHHHhccCceEEEEec
Q 037735 120 LFPK-SSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFL----NTRAQELVPGGLAALVMF 194 (329)
Q Consensus 120 lfp~-~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL----~~ra~eL~pGG~l~~~~~ 194 (329)
.+|. +++ .++|+--.++-+ ........+ ..+...+| +...+-|+|||.|++...
T Consensus 88 ~~~~~~~f-~vv~n~Py~~~~-------------------~~~~~~~~~-~~~~~~~lm~q~e~a~rll~~~G~l~v~~~ 146 (245)
T 1yub_A 88 QFPNKQRY-KIVGNIPYHLST-------------------QIIKKVVFE-SRASDIYLIVEEGFYKRTLDIHRTLGLLLH 146 (245)
T ss_dssp TCCCSSEE-EEEEECCSSSCH-------------------HHHHHHHHH-CCCEEEEEEEESSHHHHHHCGGGSHHHHTT
T ss_pred CcccCCCc-EEEEeCCccccH-------------------HHHHHHHhC-CCCCeEEEEeeHHHHHHHhCCCCchhhhhe
Confidence 4563 677 666653322210 111111111 12223345 667889999999877653
No 236
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=97.50 E-value=0.001 Score=60.13 Aligned_cols=126 Identities=13% Similarity=0.100 Sum_probs=85.4
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC----Ccceeeecccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ----SRSYYAAGVPGSF 116 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~----~~~~f~~gvpgsF 116 (329)
++..+|+|+|||||..++.+.. . .|..+|+..|+........-+++.. .+--+..| +.
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~--------~-------~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~g---D~ 81 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQ--------M-------GYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLA---NG 81 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHH--------T-------TCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEEC---SG
T ss_pred CCCCEEEEECCchHHHHHHHHH--------h-------CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC---ch
Confidence 3458999999999999999875 2 2335899999988777776555421 11233443 55
Q ss_pred ccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEeccc
Q 037735 117 YSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSV 196 (329)
Q Consensus 117 y~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~ 196 (329)
++-+.|.+.+|++++.-.. . .-+..+|....+-|+++|+|+++-.
T Consensus 82 l~~~~~~~~~D~IviaGmG----------------------g-----------~lI~~IL~~~~~~l~~~~~lIlqp~-- 126 (230)
T 3lec_A 82 LSAFEEADNIDTITICGMG----------------------G-----------RLIADILNNDIDKLQHVKTLVLQPN-- 126 (230)
T ss_dssp GGGCCGGGCCCEEEEEEEC----------------------H-----------HHHHHHHHHTGGGGTTCCEEEEEES--
T ss_pred hhccccccccCEEEEeCCc----------------------h-----------HHHHHHHHHHHHHhCcCCEEEEECC--
Confidence 5666565578887753110 0 1234778888888999999988762
Q ss_pred CCCCcccCCcccchHHHHHHHHHHHHhcCCcCCCcccCCCHHHHHHHHHhCCceEEeEEEEe
Q 037735 197 PDGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEKMYNPTPKELEGIIQRNGNFTIERMEKM 258 (329)
Q Consensus 197 ~~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~~y~ps~eE~~~~i~~~g~f~i~~~e~~ 258 (329)
-..++++.++.+. +|+|.....+
T Consensus 127 --------------------------------------~~~~~lr~~L~~~-Gf~i~~E~lv 149 (230)
T 3lec_A 127 --------------------------------------NREDDLRKWLAAN-DFEIVAEDIL 149 (230)
T ss_dssp --------------------------------------SCHHHHHHHHHHT-TEEEEEEEEE
T ss_pred --------------------------------------CChHHHHHHHHHC-CCEEEEEEEE
Confidence 1167788888888 4988876654
No 237
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=97.41 E-value=0.00045 Score=59.68 Aligned_cols=77 Identities=18% Similarity=0.177 Sum_probs=52.1
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCC--cceeeeccccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQS--RSYYAAGVPGSFYSS 119 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~--~~~f~~gvpgsFy~~ 119 (329)
+..+|+|+|||+|..+..+.. . .+ -+++..|+.......+-+.+... +.-++.+ ++.+
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~--------~-------~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~---d~~~- 108 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALL--------L-------GA-KEVICVEVDKEAVDVLIENLGEFKGKFKVFIG---DVSE- 108 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHH--------T-------TC-SEEEEEESCHHHHHHHHHHTGGGTTSEEEEES---CGGG-
T ss_pred CcCEEEEeeCCCCHHHHHHHH--------c-------CC-CEEEEEECCHHHHHHHHHHHHHcCCCEEEEEC---chHH-
Confidence 457899999999999988764 1 11 26999999876666554444321 1234443 4533
Q ss_pred cCCCCceeEEEeccceecccC
Q 037735 120 LFPKSSLHFVHSSYTLHWLSK 140 (329)
Q Consensus 120 lfp~~s~dl~~Ss~alhWLs~ 140 (329)
+| +++|+++++-.+|+.++
T Consensus 109 -~~-~~~D~v~~~~p~~~~~~ 127 (207)
T 1wy7_A 109 -FN-SRVDIVIMNPPFGSQRK 127 (207)
T ss_dssp -CC-CCCSEEEECCCCSSSST
T ss_pred -cC-CCCCEEEEcCCCccccC
Confidence 24 58999999988888654
No 238
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=97.39 E-value=0.00037 Score=65.96 Aligned_cols=125 Identities=11% Similarity=0.038 Sum_probs=73.6
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC--CCcceeeeccccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP--QSRSYYAAGVPGSFYSS 119 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~--~~~~~f~~gvpgsFy~~ 119 (329)
...+|+|+|||||..+..+.+.+- ... ....+++..|+-.......-.++. ....-+..| ++..
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~----~~~------~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~---D~l~- 195 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLE----LKG------DVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQ---DGLA- 195 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHH----TTS------SCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEES---CTTS-
T ss_pred CCCEEEeCCCCccHHHHHHHHHHH----Hhc------CCCceEEEEECCHHHHHHHHHHHHhCCCCceEEEC---CCCC-
Confidence 568999999999999988876431 100 112689999997655444332221 111223333 4433
Q ss_pred cCCCCceeEEEeccceecccCCCCC-CCCccceeecCCcHHHHHHHHHHHhhcHH-HHHHHHHHHhccCceEEEEecc
Q 037735 120 LFPKSSLHFVHSSYTLHWLSKVPKV-DGVEGSIQTRRFVNEVMEAYAAQFNNDFQ-TFLNTRAQELVPGGLAALVMFS 195 (329)
Q Consensus 120 lfp~~s~dl~~Ss~alhWLs~~p~~-~~n~g~i~~~~~~~~~~~ay~~q~~~D~~-~FL~~ra~eL~pGG~l~~~~~g 195 (329)
..+.+.+|+|+++--+++....... .+..+ .+ ....|.. .|+....+-|+|||++++.+..
T Consensus 196 ~~~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~------~~---------~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~ 258 (344)
T 2f8l_A 196 NLLVDPVDVVISDLPVGYYPDDENAKTFELC------RE---------EGHSFAHFLFIEQGMRYTKPGGYLFFLVPD 258 (344)
T ss_dssp CCCCCCEEEEEEECCCSEESCHHHHTTSTTC------CS---------SSCEEHHHHHHHHHHHTEEEEEEEEEEEEG
T ss_pred ccccCCccEEEECCCCCCcCchhhhhhcccc------CC---------CCcchHHHHHHHHHHHHhCCCCEEEEEECc
Confidence 3356789999999877664311000 01100 00 0011332 6899999999999999999853
No 239
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=97.38 E-value=0.00039 Score=67.62 Aligned_cols=112 Identities=16% Similarity=0.108 Sum_probs=70.9
Q ss_pred ceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC--CCcceeeecccccccccc
Q 037735 43 TFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP--QSRSYYAAGVPGSFYSSL 120 (329)
Q Consensus 43 ~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~--~~~~~f~~gvpgsFy~~l 120 (329)
..+|+|+|||||..|+.+.. . . ..|+..|+.......+-+++. ....-+..+ +..+-+
T Consensus 215 g~~VLDlg~GtG~~sl~~a~--------~-------g--a~V~avDis~~al~~a~~n~~~ng~~~~~~~~---D~~~~l 274 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAAR--------K-------G--AYALAVDKDLEALGVLDQAALRLGLRVDIRHG---EALPTL 274 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHH--------T-------T--CEEEEEESCHHHHHHHHHHHHHHTCCCEEEES---CHHHHH
T ss_pred CCeEEEcccchhHHHHHHHH--------c-------C--CeEEEEECCHHHHHHHHHHHHHhCCCCcEEEc---cHHHHH
Confidence 47899999999999998874 1 1 249999998777666544431 111123343 443322
Q ss_pred -CCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEeccc
Q 037735 121 -FPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSV 196 (329)
Q Consensus 121 -fp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~ 196 (329)
..++.+|+|++. +|.- ..+... .....+|+..++....+-|+|||+|++++...
T Consensus 275 ~~~~~~fD~Ii~d--------pP~f---------~~~~~~-----~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~ 329 (393)
T 4dmg_A 275 RGLEGPFHHVLLD--------PPTL---------VKRPEE-----LPAMKRHLVDLVREALRLLAEEGFLWLSSCSY 329 (393)
T ss_dssp HTCCCCEEEEEEC--------CCCC---------CSSGGG-----HHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred HHhcCCCCEEEEC--------CCcC---------CCCHHH-----HHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 113349999863 4421 111111 12345677889999999999999999777543
No 240
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=97.26 E-value=0.00018 Score=69.62 Aligned_cols=115 Identities=7% Similarity=0.005 Sum_probs=69.6
Q ss_pred ceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC--C-C--cceeeeccccccc
Q 037735 43 TFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP--Q-S--RSYYAAGVPGSFY 117 (329)
Q Consensus 43 ~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~--~-~--~~~f~~gvpgsFy 117 (329)
..+|+|+|||||..|+.+.. . .. -+|+..|+........-++.. . . .--|+.|..-.+.
T Consensus 213 ~~~VLDl~cGtG~~sl~la~--------~-------ga-~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l 276 (385)
T 2b78_A 213 GKTVLNLFSYTAAFSVAAAM--------G-------GA-MATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYF 276 (385)
T ss_dssp TCEEEEETCTTTHHHHHHHH--------T-------TB-SEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHH
T ss_pred CCeEEEEeeccCHHHHHHHH--------C-------CC-CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHH
Confidence 36899999999999998864 1 11 279999998776665544321 1 1 2345555322221
Q ss_pred cccC-CCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecc
Q 037735 118 SSLF-PKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFS 195 (329)
Q Consensus 118 ~~lf-p~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g 195 (329)
..+. ...++|+|++. +|.....++ . .....+++..++....+.|+|||.|++++..
T Consensus 277 ~~~~~~~~~fD~Ii~D--------PP~~~~~~~------~--------~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~ 333 (385)
T 2b78_A 277 KYARRHHLTYDIIIID--------PPSFARNKK------E--------VFSVSKDYHKLIRQGLEILSENGLIIASTNA 333 (385)
T ss_dssp HHHHHTTCCEEEEEEC--------CCCC-----------C--------CCCHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHhCCCccEEEEC--------CCCCCCChh------h--------HHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 1211 24589999863 442100000 0 0112346678899999999999999998743
No 241
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=97.24 E-value=0.0003 Score=67.69 Aligned_cols=112 Identities=13% Similarity=0.037 Sum_probs=72.1
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC--CCc-ceeeecccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP--QSR-SYYAAGVPGSFYS 118 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~--~~~-~~f~~gvpgsFy~ 118 (329)
+..+|+|+|||+|..|+.+.. . ..+|+..|+.......+-+++. ... --|+.| ++.+
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~--------~---------~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~---d~~~ 268 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLAL--------G---------FREVVAVDSSAEALRRAEENARLNGLGNVRVLEA---NAFD 268 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHH--------H---------EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEES---CHHH
T ss_pred CCCeEEEeeeccCHHHHHHHH--------h---------CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEC---CHHH
Confidence 346899999999999999875 1 1479999997665555433321 111 234554 4433
Q ss_pred ccC----CCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEec
Q 037735 119 SLF----PKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMF 194 (329)
Q Consensus 119 ~lf----p~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~ 194 (329)
-+. +++++|+|++ ++|....++ ..+ ....+++..++....+.|+|||.|++++.
T Consensus 269 ~~~~~~~~~~~fD~Ii~--------dpP~~~~~~---------~~~-----~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 326 (382)
T 1wxx_A 269 LLRRLEKEGERFDLVVL--------DPPAFAKGK---------KDV-----ERAYRAYKEVNLRAIKLLKEGGILATASC 326 (382)
T ss_dssp HHHHHHHTTCCEEEEEE--------CCCCSCCST---------TSH-----HHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred HHHHHHhcCCCeeEEEE--------CCCCCCCCh---------hHH-----HHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 221 2678999996 455321111 111 23345777899999999999999999885
Q ss_pred c
Q 037735 195 S 195 (329)
Q Consensus 195 g 195 (329)
.
T Consensus 327 ~ 327 (382)
T 1wxx_A 327 S 327 (382)
T ss_dssp C
T ss_pred C
Confidence 4
No 242
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=97.18 E-value=0.00014 Score=68.23 Aligned_cols=78 Identities=13% Similarity=-0.035 Sum_probs=55.7
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC-Ccceeeecccccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ-SRSYYAAGVPGSFYSSL 120 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~-~~~~f~~gvpgsFy~~l 120 (329)
+..+|+|+|||+|..|..+.... .+|+..|+-......+-+.+.. .+--++.| ++.+--
T Consensus 50 ~~~~VLEIG~G~G~lT~~La~~~-----------------~~V~aVEid~~li~~a~~~~~~~~~v~vi~g---D~l~~~ 109 (295)
T 3gru_A 50 KDDVVLEIGLGKGILTEELAKNA-----------------KKVYVIEIDKSLEPYANKLKELYNNIEIIWG---DALKVD 109 (295)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS-----------------SEEEEEESCGGGHHHHHHHHHHCSSEEEEES---CTTTSC
T ss_pred CcCEEEEECCCchHHHHHHHhcC-----------------CEEEEEECCHHHHHHHHHHhccCCCeEEEEC---chhhCC
Confidence 45689999999999999997511 3799999987776665444321 12234444 675555
Q ss_pred CCCCceeEEEeccceeccc
Q 037735 121 FPKSSLHFVHSSYTLHWLS 139 (329)
Q Consensus 121 fp~~s~dl~~Ss~alhWLs 139 (329)
+|+.++|.++++...+|-+
T Consensus 110 ~~~~~fD~Iv~NlPy~is~ 128 (295)
T 3gru_A 110 LNKLDFNKVVANLPYQISS 128 (295)
T ss_dssp GGGSCCSEEEEECCGGGHH
T ss_pred cccCCccEEEEeCcccccH
Confidence 7777899999998888844
No 243
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=97.14 E-value=0.00032 Score=63.43 Aligned_cols=99 Identities=15% Similarity=0.054 Sum_probs=61.5
Q ss_pred cchHHHhHHHHHHHHHhHhhHHHHHhhcccCCCCCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEec
Q 037735 8 HSYASNSAYQSIQVYILRYDPRTAVTDLGTNAVPNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFN 87 (329)
Q Consensus 8 ~sY~~nS~~Q~~~~~~~~~~l~~ai~~i~~~~~~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~n 87 (329)
.+|.+|-..+..++..+...+. ..+..+|+|+|||+|..|..+.+ +. .+|+..
T Consensus 6 k~~gQ~fl~d~~~~~~i~~~~~----------~~~~~~VLDiG~G~G~lt~~l~~--------~~---------~~v~~v 58 (244)
T 1qam_A 6 IKHSQNFITSKHNIDKIMTNIR----------LNEHDNIFEIGSGKGHFTLELVQ--------RC---------NFVTAI 58 (244)
T ss_dssp ----CCBCCCHHHHHHHHTTCC----------CCTTCEEEEECCTTSHHHHHHHH--------HS---------SEEEEE
T ss_pred ccCCccccCCHHHHHHHHHhCC----------CCCCCEEEEEeCCchHHHHHHHH--------cC---------CeEEEE
Confidence 4677777777777666554432 23457899999999999999875 21 379999
Q ss_pred CCCcchHHhhhhcCCCC-cceeeeccccccccccCCC-CceeEEEeccceec
Q 037735 88 DHSDNDFNTLFKSLPQS-RSYYAAGVPGSFYSSLFPK-SSLHFVHSSYTLHW 137 (329)
Q Consensus 88 DLp~ndfn~lf~~l~~~-~~~f~~gvpgsFy~~lfp~-~s~dl~~Ss~alhW 137 (329)
|+.......+-+.+... +-.++. |++.+-.+|. .++ .++|+...+|
T Consensus 59 D~~~~~~~~a~~~~~~~~~v~~~~---~D~~~~~~~~~~~~-~vv~nlPy~~ 106 (244)
T 1qam_A 59 EIDHKLCKTTENKLVDHDNFQVLN---KDILQFKFPKNQSY-KIFGNIPYNI 106 (244)
T ss_dssp CSCHHHHHHHHHHTTTCCSEEEEC---CCGGGCCCCSSCCC-EEEEECCGGG
T ss_pred ECCHHHHHHHHHhhccCCCeEEEE---ChHHhCCcccCCCe-EEEEeCCccc
Confidence 99877766665554321 222444 4675545664 344 5777766665
No 244
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=97.13 E-value=0.0005 Score=66.02 Aligned_cols=98 Identities=8% Similarity=-0.026 Sum_probs=62.8
Q ss_pred hHHHhHHHHHHHHHhHhhHHHHHhhcccCCCCCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCC
Q 037735 10 YASNSAYQSIQVYILRYDPRTAVTDLGTNAVPNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDH 89 (329)
Q Consensus 10 Y~~nS~~Q~~~~~~~~~~l~~ai~~i~~~~~~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDL 89 (329)
|...+.++..++..+..+. . .+..+|+|+|||+|..++.+.. . .+..+|+..|+
T Consensus 196 ~~~~a~l~~~la~~l~~~~---~--------~~~~~vLD~gCGsG~~~i~~a~--------~-------~~~~~v~g~Di 249 (373)
T 3tm4_A 196 YDHPAHLKASIANAMIELA---E--------LDGGSVLDPMCGSGTILIELAL--------R-------RYSGEIIGIEK 249 (373)
T ss_dssp SCCTTCCCHHHHHHHHHHH---T--------CCSCCEEETTCTTCHHHHHHHH--------T-------TCCSCEEEEES
T ss_pred ccCCCCccHHHHHHHHHhh---c--------CCCCEEEEccCcCcHHHHHHHH--------h-------CCCCeEEEEeC
Confidence 4445555566555554333 1 2347899999999999888864 1 12237999999
Q ss_pred CcchHHhhhhcCCC----CcceeeeccccccccccCCCCceeEEEecccee
Q 037735 90 SDNDFNTLFKSLPQ----SRSYYAAGVPGSFYSSLFPKSSLHFVHSSYTLH 136 (329)
Q Consensus 90 p~ndfn~lf~~l~~----~~~~f~~gvpgsFy~~lfp~~s~dl~~Ss~alh 136 (329)
...+....-+++.. ..--|..+ ++.+..+|++++|+|+++-..+
T Consensus 250 s~~~l~~A~~n~~~~gl~~~i~~~~~---D~~~~~~~~~~fD~Ii~npPyg 297 (373)
T 3tm4_A 250 YRKHLIGAEMNALAAGVLDKIKFIQG---DATQLSQYVDSVDFAISNLPYG 297 (373)
T ss_dssp CHHHHHHHHHHHHHTTCGGGCEEEEC---CGGGGGGTCSCEEEEEEECCCC
T ss_pred CHHHHHHHHHHHHHcCCCCceEEEEC---ChhhCCcccCCcCEEEECCCCC
Confidence 88777665554321 12234444 5756557789999999975543
No 245
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=97.12 E-value=0.002 Score=59.76 Aligned_cols=101 Identities=8% Similarity=-0.055 Sum_probs=65.9
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC--CC--cceeeeccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP--QS--RSYYAAGVPGSFY 117 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~--~~--~~~f~~gvpgsFy 117 (329)
+..+|+|+|||+|+.|+.++. + ...+|+.+|+-..-+..+-+++. .. +-.+..|+ .
T Consensus 125 ~g~~VlD~~aG~G~~~i~~a~--------~--------g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D---~- 184 (278)
T 3k6r_A 125 PDELVVDMFAGIGHLSLPIAV--------Y--------GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMD---N- 184 (278)
T ss_dssp TTCEEEETTCTTTTTTHHHHH--------H--------TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSC---T-
T ss_pred CCCEEEEecCcCcHHHHHHHH--------h--------cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCc---H-
Confidence 347899999999999998864 2 11479999998766666655432 11 12234443 3
Q ss_pred cccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccC
Q 037735 118 SSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVP 197 (329)
Q Consensus 118 ~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~ 197 (329)
..+.+.+.+|.|+.. +|.. + ..||..-.+-|+|||++.+-.+...
T Consensus 185 ~~~~~~~~~D~Vi~~--------~p~~------------~---------------~~~l~~a~~~lk~gG~ih~~~~~~e 229 (278)
T 3k6r_A 185 RDFPGENIADRILMG--------YVVR------------T---------------HEFIPKALSIAKDGAIIHYHNTVPE 229 (278)
T ss_dssp TTCCCCSCEEEEEEC--------CCSS------------G---------------GGGHHHHHHHEEEEEEEEEEEEEEG
T ss_pred HHhccccCCCEEEEC--------CCCc------------H---------------HHHHHHHHHHcCCCCEEEEEeeecc
Confidence 233466788988743 3422 0 1456666778999999988766544
No 246
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=97.09 E-value=0.00037 Score=67.26 Aligned_cols=114 Identities=15% Similarity=0.052 Sum_probs=72.8
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC--CC--cceeeeccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP--QS--RSYYAAGVPGSFY 117 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~--~~--~~~f~~gvpgsFy 117 (329)
+..+|+|+|||+|..|+.+.. . ...+|+..|+.......+-+++. .. +-.|+.+ ++.
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~--------~--------g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~---d~~ 277 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAI--------A--------GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVG---SAF 277 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHH--------T--------TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES---CHH
T ss_pred CCCeEEEecCCCCHHHHHHHH--------C--------CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEC---CHH
Confidence 346899999999999998874 1 11379999998665555433321 11 2235554 443
Q ss_pred cccC----CCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEe
Q 037735 118 SSLF----PKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVM 193 (329)
Q Consensus 118 ~~lf----p~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~ 193 (329)
+.+. +.+++|+|++ ++|... .+...+ ....+++..++....+.|+|||.|++++
T Consensus 278 ~~~~~~~~~~~~fD~Vi~--------dpP~~~---------~~~~~~-----~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 335 (396)
T 2as0_A 278 EEMEKLQKKGEKFDIVVL--------DPPAFV---------QHEKDL-----KAGLRAYFNVNFAGLNLVKDGGILVTCS 335 (396)
T ss_dssp HHHHHHHHTTCCEEEEEE--------CCCCSC---------SSGGGH-----HHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred HHHHHHHhhCCCCCEEEE--------CCCCCC---------CCHHHH-----HHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 3221 2678999986 344321 111111 2334677899999999999999999888
Q ss_pred ccc
Q 037735 194 FSV 196 (329)
Q Consensus 194 ~g~ 196 (329)
...
T Consensus 336 ~~~ 338 (396)
T 2as0_A 336 CSQ 338 (396)
T ss_dssp CCT
T ss_pred CCC
Confidence 643
No 247
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=97.09 E-value=0.0011 Score=63.44 Aligned_cols=103 Identities=8% Similarity=-0.008 Sum_probs=68.0
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC---Ccceeeecccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ---SRSYYAAGVPGSFYS 118 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~---~~~~f~~gvpgsFy~ 118 (329)
+..+|+|+| |+|..++.+.. . .|..+|+..|+...+....-+++.. .+--|+. +++.+
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~--------~-------~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~---~D~~~ 232 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALML--------S-------GLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFT---FDLRK 232 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHH--------H-------TCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEEC---CCTTS
T ss_pred CCCEEEEEC-CCCHHHHHHHH--------h-------CCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEE---Chhhh
Confidence 357999999 99999988753 1 2335899999987666655443321 1223444 45644
Q ss_pred cc--CCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceE-EEEecc
Q 037735 119 SL--FPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLA-ALVMFS 195 (329)
Q Consensus 119 ~l--fp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l-~~~~~g 195 (329)
-+ .+++++|+|+++.-+++. +...||+..++.|+|||++ ++++..
T Consensus 233 ~l~~~~~~~fD~Vi~~~p~~~~--------------------------------~~~~~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 233 PLPDYALHKFDTFITDPPETLE--------------------------------AIRAFVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp CCCTTTSSCBSEEEECCCSSHH--------------------------------HHHHHHHHHHHTBCSTTCEEEEEECT
T ss_pred hchhhccCCccEEEECCCCchH--------------------------------HHHHHHHHHHHHcccCCeEEEEEEec
Confidence 23 134689999987544331 1368899999999999954 666654
No 248
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=97.08 E-value=0.0013 Score=59.90 Aligned_cols=102 Identities=17% Similarity=0.094 Sum_probs=69.2
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC----Ccceeeecccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ----SRSYYAAGVPGSF 116 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~----~~~~f~~gvpgsF 116 (329)
++..+|+|+|||+|..++.+.. . .|..+|+..|+....+...-+++.. .+--+.. |+.
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~--------~-------~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~---gD~ 81 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVK--------N-------QTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRK---GNG 81 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHH--------T-------TSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEE---CSG
T ss_pred CCCCEEEEECCccHHHHHHHHH--------h-------CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEe---cch
Confidence 3458999999999999999875 2 2335899999988777776555421 1122344 356
Q ss_pred ccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEe
Q 037735 117 YSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVM 193 (329)
Q Consensus 117 y~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~ 193 (329)
++-+.|.+.+|+|++.-.- ..-+..+|....+-|+++|+|+++-
T Consensus 82 l~~~~~~~~~D~IviagmG---------------------------------g~lI~~IL~~~~~~L~~~~~lIlq~ 125 (244)
T 3gnl_A 82 LAVIEKKDAIDTIVIAGMG---------------------------------GTLIRTILEEGAAKLAGVTKLILQP 125 (244)
T ss_dssp GGGCCGGGCCCEEEEEEEC---------------------------------HHHHHHHHHHTGGGGTTCCEEEEEE
T ss_pred hhccCccccccEEEEeCCc---------------------------------hHHHHHHHHHHHHHhCCCCEEEEEc
Confidence 5666555569988863110 0123477888888899999999885
No 249
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=97.02 E-value=0.0003 Score=65.57 Aligned_cols=100 Identities=11% Similarity=0.042 Sum_probs=58.2
Q ss_pred cchHHHhHHHHHHHHHhHhhHHHHHhhcccCCCCCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEec
Q 037735 8 HSYASNSAYQSIQVYILRYDPRTAVTDLGTNAVPNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFN 87 (329)
Q Consensus 8 ~sY~~nS~~Q~~~~~~~~~~l~~ai~~i~~~~~~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~n 87 (329)
.+|.+|-..+..++..+...+. ..+..+|+|+|||+|..|..+.+ + ..+|+..
T Consensus 18 k~~Gq~fl~~~~i~~~i~~~~~----------~~~~~~VLDiG~G~G~lt~~La~--------~---------~~~v~~v 70 (299)
T 2h1r_A 18 YFQGQHLLKNPGILDKIIYAAK----------IKSSDIVLEIGCGTGNLTVKLLP--------L---------AKKVITI 70 (299)
T ss_dssp -----CEECCHHHHHHHHHHHC----------CCTTCEEEEECCTTSTTHHHHTT--------T---------SSEEEEE
T ss_pred hccccceecCHHHHHHHHHhcC----------CCCcCEEEEEcCcCcHHHHHHHh--------c---------CCEEEEE
Confidence 3455555555555555443322 23457899999999999998864 1 1479999
Q ss_pred CCCcchHHhhhhcCC--C-CcceeeeccccccccccCCCCceeEEEeccceeccc
Q 037735 88 DHSDNDFNTLFKSLP--Q-SRSYYAAGVPGSFYSSLFPKSSLHFVHSSYTLHWLS 139 (329)
Q Consensus 88 DLp~ndfn~lf~~l~--~-~~~~f~~gvpgsFy~~lfp~~s~dl~~Ss~alhWLs 139 (329)
|+.......+-+.+. . .+-.++. +++..- |..++|+|+++...+|.+
T Consensus 71 Di~~~~~~~a~~~~~~~~~~~v~~~~---~D~~~~--~~~~~D~Vv~n~py~~~~ 120 (299)
T 2h1r_A 71 DIDSRMISEVKKRCLYEGYNNLEVYE---GDAIKT--VFPKFDVCTANIPYKISS 120 (299)
T ss_dssp CSCHHHHHHHHHHHHHTTCCCEEC-------CCSS--CCCCCSEEEEECCGGGHH
T ss_pred ECCHHHHHHHHHHHHHcCCCceEEEE---CchhhC--CcccCCEEEEcCCccccc
Confidence 998766655543321 1 1122333 356432 334899999999988854
No 250
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=97.01 E-value=0.0007 Score=65.37 Aligned_cols=112 Identities=14% Similarity=0.112 Sum_probs=69.6
Q ss_pred ceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC--CC---cceeeeccccccc
Q 037735 43 TFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP--QS---RSYYAAGVPGSFY 117 (329)
Q Consensus 43 ~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~--~~---~~~f~~gvpgsFy 117 (329)
..+|+|+|||+|..|+.+.. . . ..+|+..|+.......+-+++. .. +--|+.| ++.
T Consensus 221 ~~~VLDl~cG~G~~sl~la~--------~-------g-~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~---D~~ 281 (396)
T 3c0k_A 221 NKRVLNCFSYTGGFAVSALM--------G-------G-CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRD---DVF 281 (396)
T ss_dssp TCEEEEESCTTCSHHHHHHH--------T-------T-CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEES---CHH
T ss_pred CCeEEEeeccCCHHHHHHHH--------C-------C-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEEC---CHH
Confidence 36899999999999998874 1 1 1379999998766555433321 11 2235554 443
Q ss_pred cccC--C--CCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEe
Q 037735 118 SSLF--P--KSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVM 193 (329)
Q Consensus 118 ~~lf--p--~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~ 193 (329)
+-+. + ..++|+|++. +|....++..+ ....+++..++....+.|+|||.+++++
T Consensus 282 ~~~~~~~~~~~~fD~Ii~d--------pP~~~~~~~~~--------------~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 339 (396)
T 3c0k_A 282 KLLRTYRDRGEKFDVIVMD--------PPKFVENKSQL--------------MGACRGYKDINMLAIQLLNEGGILLTFS 339 (396)
T ss_dssp HHHHHHHHTTCCEEEEEEC--------CSSTTTCSSSS--------------SCCCTHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHhcCCCCCEEEEC--------CCCCCCChhHH--------------HHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 3221 1 4689999873 44321111000 0112466788999999999999999987
Q ss_pred cc
Q 037735 194 FS 195 (329)
Q Consensus 194 ~g 195 (329)
..
T Consensus 340 ~~ 341 (396)
T 3c0k_A 340 CS 341 (396)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 251
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=96.99 E-value=0.00089 Score=65.72 Aligned_cols=129 Identities=15% Similarity=0.024 Sum_probs=69.2
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhc--CCCCccceEEecCCCcchHHhhhhcC--CCC---cceeeecccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHE--CPSAIEFQVFFNDHSDNDFNTLFKSL--PQS---RSYYAAGVPG 114 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~--~~~~pe~~v~~nDLp~ndfn~lf~~l--~~~---~~~f~~gvpg 114 (329)
...+|+|.|||||.....+.+.+. +..... ....+..+++..|+-.......-.++ ... ..-+..|
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~----~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~g--- 243 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMK----GQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCE--- 243 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHH----TCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEEC---
T ss_pred CCCEEeccCCCcchHHHHHHHHHH----HhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeC---
Confidence 346899999999999887765441 110000 00002357999999765554433222 111 1223333
Q ss_pred ccccccCCCCceeEEEecccee--cccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEE
Q 037735 115 SFYSSLFPKSSLHFVHSSYTLH--WLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALV 192 (329)
Q Consensus 115 sFy~~lfp~~s~dl~~Ss~alh--WLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~ 192 (329)
++.... +...+|+|+++--++ |-.+.+ +.+.......+. .-..|+++..+-|+|||++++.
T Consensus 244 D~l~~~-~~~~fD~Iv~NPPf~~~~~~~~~---~~~~~~~~~~~~-------------~~~~fl~~~~~~Lk~gG~~a~V 306 (445)
T 2okc_A 244 DSLEKE-PSTLVDVILANPPFGTRPAGSVD---INRPDFYVETKN-------------NQLNFLQHMMLMLKTGGRAAVV 306 (445)
T ss_dssp CTTTSC-CSSCEEEEEECCCSSCCCTTCCC---CCCTTSSSCCSC-------------HHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCc-ccCCcCEEEECCCCCCcccccch---hhHhhcCCCCcc-------------hHHHHHHHHHHHhccCCEEEEE
Confidence 443332 234899999983332 211111 011111111111 1237899999999999999999
Q ss_pred ec
Q 037735 193 MF 194 (329)
Q Consensus 193 ~~ 194 (329)
++
T Consensus 307 ~p 308 (445)
T 2okc_A 307 LP 308 (445)
T ss_dssp EE
T ss_pred EC
Confidence 85
No 252
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=96.95 E-value=0.0011 Score=61.49 Aligned_cols=108 Identities=13% Similarity=-0.021 Sum_probs=60.7
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCC----cceeeeccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQS----RSYYAAGVPGSFY 117 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~----~~~f~~gvpgsFy 117 (329)
...+|+|||||.|..|..++. + .+.-.+...|+-. |. ..+.++.. ...+.. +.+-
T Consensus 74 ~~~~VLDLGaAPGGWSQvAa~--------~-------~~~~~v~g~dVGv-Dl--~~~pi~~~~~g~~ii~~~---~~~d 132 (277)
T 3evf_A 74 LEGRVIDLGCGRGGWCYYAAA--------Q-------KEVSGVKGFTLGR-DG--HEKPMNVQSLGWNIITFK---DKTD 132 (277)
T ss_dssp CCEEEEEETCTTCHHHHHHHT--------S-------TTEEEEEEECCCC-TT--CCCCCCCCBTTGGGEEEE---CSCC
T ss_pred CCCEEEEecCCCCHHHHHHHH--------h-------cCCCcceeEEEec-cC--cccccccCcCCCCeEEEe---ccce
Confidence 346899999999999997764 1 1112344444431 21 00011100 111111 1121
Q ss_pred cccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHh-hcHHHHHHHHHHHhccC-ceEEEEecc
Q 037735 118 SSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFN-NDFQTFLNTRAQELVPG-GLAALVMFS 195 (329)
Q Consensus 118 ~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~-~D~~~FL~~ra~eL~pG-G~l~~~~~g 195 (329)
-+-++++.+|+|+|..+.+ +-.+ +.++++ -++ |....+.|+|| |.+++-+|-
T Consensus 133 v~~l~~~~~DlVlsD~apn--sG~~---------------------~~D~~rs~~L---L~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 133 IHRLEPVKCDTLLCDIGES--SSSS---------------------VTEGERTVRV---LDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp TTTSCCCCCSEEEECCCCC--CSCH---------------------HHHHHHHHHH---HHHHHHHHTTCCSEEEEEESC
T ss_pred ehhcCCCCccEEEecCccC--cCch---------------------HHHHHHHHHH---HHHHHHHhCCCCCeEEEEecC
Confidence 2347788999999998877 2211 111111 122 77788999999 999999886
Q ss_pred c
Q 037735 196 V 196 (329)
Q Consensus 196 ~ 196 (329)
+
T Consensus 187 p 187 (277)
T 3evf_A 187 P 187 (277)
T ss_dssp T
T ss_pred C
Confidence 3
No 253
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=96.93 E-value=0.0046 Score=60.48 Aligned_cols=73 Identities=11% Similarity=-0.016 Sum_probs=47.6
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC--C-Ccceeeecccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP--Q-SRSYYAAGVPGSFYS 118 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~--~-~~~~f~~gvpgsFy~ 118 (329)
+..+|+|+|||+|..|+.+.. . ..+|+..|.........-++.. . .+-.|..|.-.++..
T Consensus 286 ~~~~VLDlgcG~G~~~~~la~--------~---------~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~ 348 (433)
T 1uwv_A 286 PEDRVLDLFCGMGNFTLPLAT--------Q---------AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVT 348 (433)
T ss_dssp TTCEEEEESCTTTTTHHHHHT--------T---------SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCS
T ss_pred CCCEEEECCCCCCHHHHHHHh--------h---------CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhh
Confidence 346899999999999999874 1 1479999998766555443331 1 123466654333222
Q ss_pred c-cCCCCceeEEEe
Q 037735 119 S-LFPKSSLHFVHS 131 (329)
Q Consensus 119 ~-lfp~~s~dl~~S 131 (329)
. .++++++|++++
T Consensus 349 ~~~~~~~~fD~Vv~ 362 (433)
T 1uwv_A 349 KQPWAKNGFDKVLL 362 (433)
T ss_dssp SSGGGTTCCSEEEE
T ss_pred hhhhhcCCCCEEEE
Confidence 2 256788999997
No 254
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=96.93 E-value=0.00038 Score=64.39 Aligned_cols=73 Identities=10% Similarity=-0.049 Sum_probs=49.8
Q ss_pred EEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeeccccccccccCCCC
Q 037735 45 RIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSSLFPKS 124 (329)
Q Consensus 45 ~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~lfp~~ 124 (329)
+|+|+|||+|..|..+.+ + . .+|+..|+-..+...+-+.++..+--++. |+++.--+++.
T Consensus 49 ~VLEIG~G~G~lt~~L~~--------~--------~-~~V~avEid~~~~~~l~~~~~~~~v~vi~---~D~l~~~~~~~ 108 (271)
T 3fut_A 49 PVFEVGPGLGALTRALLE--------A--------G-AEVTAIEKDLRLRPVLEETLSGLPVRLVF---QDALLYPWEEV 108 (271)
T ss_dssp CEEEECCTTSHHHHHHHH--------T--------T-CCEEEEESCGGGHHHHHHHTTTSSEEEEE---SCGGGSCGGGS
T ss_pred eEEEEeCchHHHHHHHHH--------c--------C-CEEEEEECCHHHHHHHHHhcCCCCEEEEE---CChhhCChhhc
Confidence 999999999999999985 1 1 47999999887777766655532223444 46655445432
Q ss_pred -ceeEEEeccceec
Q 037735 125 -SLHFVHSSYTLHW 137 (329)
Q Consensus 125 -s~dl~~Ss~alhW 137 (329)
..|.++++.-.+.
T Consensus 109 ~~~~~iv~NlPy~i 122 (271)
T 3fut_A 109 PQGSLLVANLPYHI 122 (271)
T ss_dssp CTTEEEEEEECSSC
T ss_pred cCccEEEecCcccc
Confidence 5678887765444
No 255
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=96.90 E-value=0.0015 Score=63.99 Aligned_cols=67 Identities=13% Similarity=0.065 Sum_probs=44.1
Q ss_pred ceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC--Ccceeeecccccccccc
Q 037735 43 TFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ--SRSYYAAGVPGSFYSSL 120 (329)
Q Consensus 43 ~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~--~~~~f~~gvpgsFy~~l 120 (329)
..+|+|+|||+|..|+.+.. . ..+|+..|.........-++... ..--|..| ++. .+
T Consensus 291 ~~~VLDlgcG~G~~sl~la~--------~---------~~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~---d~~-~~ 349 (425)
T 2jjq_A 291 GEKILDMYSGVGTFGIYLAK--------R---------GFNVKGFDSNEFAIEMARRNVEINNVDAEFEVA---SDR-EV 349 (425)
T ss_dssp SSEEEEETCTTTHHHHHHHH--------T---------TCEEEEEESCHHHHHHHHHHHHHHTCCEEEEEC---CTT-TC
T ss_pred CCEEEEeeccchHHHHHHHH--------c---------CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEC---ChH-Hc
Confidence 46899999999999998864 1 13799999987666555443321 11234544 453 33
Q ss_pred CCCCceeEEEe
Q 037735 121 FPKSSLHFVHS 131 (329)
Q Consensus 121 fp~~s~dl~~S 131 (329)
++. ++|++++
T Consensus 350 ~~~-~fD~Vv~ 359 (425)
T 2jjq_A 350 SVK-GFDTVIV 359 (425)
T ss_dssp CCT-TCSEEEE
T ss_pred Ccc-CCCEEEE
Confidence 444 8999987
No 256
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=96.87 E-value=0.00068 Score=68.74 Aligned_cols=80 Identities=13% Similarity=0.220 Sum_probs=55.4
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC---CCCcceeeeccccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL---PQSRSYYAAGVPGSFY 117 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l---~~~~~~f~~gvpgsFy 117 (329)
..+.+|||+|||+|.+|..+.. . ..+|+.-|+........-... +....-|..+ +..
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~--------~---------ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~---~~~ 124 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLAS--------K---------GATIVGIDFQQENINVCRALAEENPDFAAEFRVG---RIE 124 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHH--------T---------TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEEC---CHH
T ss_pred CCCCeEEEECCCCcHHHHHHHh--------C---------CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEEC---CHH
Confidence 4578999999999999998874 1 258999999987665432221 1111234444 342
Q ss_pred cc--cCCCCceeEEEeccceecccC
Q 037735 118 SS--LFPKSSLHFVHSSYTLHWLSK 140 (329)
Q Consensus 118 ~~--lfp~~s~dl~~Ss~alhWLs~ 140 (329)
+- .++++++|+|++.-.||++.+
T Consensus 125 ~~~~~~~~~~fD~v~~~e~~ehv~~ 149 (569)
T 4azs_A 125 EVIAALEEGEFDLAIGLSVFHHIVH 149 (569)
T ss_dssp HHHHHCCTTSCSEEEEESCHHHHHH
T ss_pred HHhhhccCCCccEEEECcchhcCCC
Confidence 22 256789999999999999764
No 257
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=96.86 E-value=0.0019 Score=67.22 Aligned_cols=115 Identities=11% Similarity=0.046 Sum_probs=71.9
Q ss_pred ceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC-----CCCcceeeeccccccc
Q 037735 43 TFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL-----PQSRSYYAAGVPGSFY 117 (329)
Q Consensus 43 ~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l-----~~~~~~f~~gvpgsFy 117 (329)
..+|||+|||||..|+.++. . .. .+|+..|+.......+-+++ ...+--|+.+ +.+
T Consensus 540 g~~VLDlg~GtG~~sl~aa~--------~-------ga-~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~---D~~ 600 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAGL--------G-------GA-RSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQA---DCL 600 (703)
T ss_dssp TCEEEEESCTTCHHHHHHHH--------T-------TC-SEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEES---CHH
T ss_pred CCcEEEeeechhHHHHHHHH--------C-------CC-CEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEec---CHH
Confidence 36899999999999988763 1 12 36999999876666554432 1112335554 444
Q ss_pred ccc-CCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEeccc
Q 037735 118 SSL-FPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSV 196 (329)
Q Consensus 118 ~~l-fp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~ 196 (329)
+-+ ...+++|+|++ ++|.-..++ ....+ .+..+|...++....+-|+|||+|++++..+
T Consensus 601 ~~l~~~~~~fD~Ii~--------DPP~f~~~~-------~~~~~-----~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~ 660 (703)
T 3v97_A 601 AWLREANEQFDLIFI--------DPPTFSNSK-------RMEDA-----FDVQRDHLALMKDLKRLLRAGGTIMFSNNKR 660 (703)
T ss_dssp HHHHHCCCCEEEEEE--------CCCSBC--------------C-----CBHHHHHHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred HHHHhcCCCccEEEE--------CCccccCCc-------cchhH-----HHHHHHHHHHHHHHHHhcCCCcEEEEEECCc
Confidence 433 24678999986 344220000 00000 1234577889999999999999999887543
No 258
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=96.72 E-value=0.0014 Score=61.95 Aligned_cols=97 Identities=12% Similarity=0.121 Sum_probs=65.6
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC--C--Ccceeeeccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP--Q--SRSYYAAGVPGSFY 117 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~--~--~~~~f~~gvpgsFy 117 (329)
+..+|+|+|||+|..|+. .+ ...+|+..|+.......+-+++. . .+--|+.| ++.
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~-----------------~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~---D~~ 253 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK-----------------NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILS---DVR 253 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT-----------------TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES---CGG
T ss_pred CCCEEEEccCccCHHHHh-cc-----------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC---ChH
Confidence 346899999999999887 53 12489999998766665544431 1 12335554 343
Q ss_pred cccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccC
Q 037735 118 SSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVP 197 (329)
Q Consensus 118 ~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~ 197 (329)
+-+ +++|++++. +|.. ...|+....+.|+|||++++..+...
T Consensus 254 ~~~---~~fD~Vi~d--------pP~~---------------------------~~~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 254 EVD---VKGNRVIMN--------LPKF---------------------------AHKFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp GCC---CCEEEEEEC--------CTTT---------------------------GGGGHHHHHHHEEEEEEEEEEEEESS
T ss_pred Hhc---CCCcEEEEC--------CcHh---------------------------HHHHHHHHHHHcCCCCEEEEEEeecC
Confidence 333 789999863 3421 01568888899999999999887755
No 259
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=96.65 E-value=0.0021 Score=66.19 Aligned_cols=129 Identities=13% Similarity=0.110 Sum_probs=75.8
Q ss_pred HHHhHHHHHHHHHhHhhHHHHHhhcccCCCCCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCC
Q 037735 11 ASNSAYQSIQVYILRYDPRTAVTDLGTNAVPNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHS 90 (329)
Q Consensus 11 ~~nS~~Q~~~~~~~~~~l~~ai~~i~~~~~~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp 90 (329)
-+....|+++..++.+++.+.- ...+..+|+|+|||+|+++...+++.- +. .-.+.||..+-.
T Consensus 332 vKy~~Ye~AI~~Al~d~~~~~~------~~~~~~vVldVGaGrGpLv~~al~A~a----~~-------~~~vkVyAVEkn 394 (637)
T 4gqb_A 332 IKYSQYQQAIYKCLLDRVPEEE------KDTNVQVLMVLGAGRGPLVNASLRAAK----QA-------DRRIKLYAVEKN 394 (637)
T ss_dssp HHHHHHHHHHHHHHHHHSCGGG------TTTCEEEEEEESCTTSHHHHHHHHHHH----HT-------TCEEEEEEEESC
T ss_pred hhHHHHHHHHHHHHHHhhhhcc------ccCCCcEEEEECCCCcHHHHHHHHHHH----hc-------CCCcEEEEEECC
Confidence 3667778888777776554321 134567899999999999887776441 11 123678887764
Q ss_pred cchHHhhhhcCC----CCcceeeeccccccccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHH
Q 037735 91 DNDFNTLFKSLP----QSRSYYAAGVPGSFYSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAA 166 (329)
Q Consensus 91 ~ndfn~lf~~l~----~~~~~f~~gvpgsFy~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~ 166 (329)
.|-..++ +.+. .++-..+ .|+. +.+-++..+|+++| -|+-..-. | .+
T Consensus 395 p~A~~a~-~~v~~N~~~dkVtVI---~gd~-eev~LPEKVDIIVS----EwMG~fLl---~-------E~---------- 445 (637)
T 4gqb_A 395 PNAVVTL-ENWQFEEWGSQVTVV---SSDM-REWVAPEKADIIVS----ELLGSFAD---N-------EL---------- 445 (637)
T ss_dssp HHHHHHH-HHHHHHTTGGGEEEE---ESCT-TTCCCSSCEEEEEC----CCCBTTBG---G-------GC----------
T ss_pred HHHHHHH-HHHHhccCCCeEEEE---eCcc-eeccCCcccCEEEE----EcCccccc---c-------cC----------
Confidence 3322221 1110 1111233 3456 55555678999998 34432210 0 11
Q ss_pred HHhhcHHHHHHHHHHHhccCceEE
Q 037735 167 QFNNDFQTFLNTRAQELVPGGLAA 190 (329)
Q Consensus 167 q~~~D~~~FL~~ra~eL~pGG~l~ 190 (329)
+-..|.+|-+-|+|||.|+
T Consensus 446 -----mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 446 -----SPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp -----HHHHHHHHGGGEEEEEEEE
T ss_pred -----CHHHHHHHHHhcCCCcEEc
Confidence 1244788899999999974
No 260
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=96.65 E-value=0.00096 Score=61.01 Aligned_cols=43 Identities=14% Similarity=0.046 Sum_probs=32.2
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL 101 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l 101 (329)
+..+|+|+|||+|..|..+.. + ..+|+..|+-..+...+-+.+
T Consensus 29 ~~~~VLEIG~G~G~lt~~La~--------~---------~~~V~avEid~~~~~~~~~~~ 71 (255)
T 3tqs_A 29 KTDTLVEIGPGRGALTDYLLT--------E---------CDNLALVEIDRDLVAFLQKKY 71 (255)
T ss_dssp TTCEEEEECCTTTTTHHHHTT--------T---------SSEEEEEECCHHHHHHHHHHH
T ss_pred CcCEEEEEcccccHHHHHHHH--------h---------CCEEEEEECCHHHHHHHHHHH
Confidence 457899999999999999974 1 137888888776666554444
No 261
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=96.53 E-value=0.0025 Score=61.37 Aligned_cols=114 Identities=13% Similarity=-0.059 Sum_probs=68.0
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC--------C---cceee
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ--------S---RSYYA 109 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~--------~---~~~f~ 109 (329)
+++.+|||+|||+|..+..+++ + .+ .+|...|+-.......-+.++. . +--++
T Consensus 187 p~pkrVL~IGgG~G~~arellk--------~-------~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi 250 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVK--------L-------KP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVL 250 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHT--------T-------CC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEE
T ss_pred CCCCEEEEEECChhHHHHHHHH--------C-------CC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEE
Confidence 5689999999999998887763 1 23 4788889876555544444431 0 12345
Q ss_pred ecccccccccc-CCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHH----HHHhc
Q 037735 110 AGVPGSFYSSL-FPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTR----AQELV 184 (329)
Q Consensus 110 ~gvpgsFy~~l-fp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~r----a~eL~ 184 (329)
.|+...|..++ -+.+++|+|++-..- .|.. ..|. +.|.. .|++.. .+.|+
T Consensus 251 ~~Da~~~L~~~~~~~~~fDvII~D~~d-----~P~~-----------~~p~--~L~t~-------eFy~~~~~~~~~~L~ 305 (364)
T 2qfm_A 251 IEDCIPVLKRYAKEGREFDYVINDLTA-----VPIS-----------TSPE--EDSTW-------EFLRLILDLSMKVLK 305 (364)
T ss_dssp ESCHHHHHHHHHHHTCCEEEEEEECCS-----SCCC-----------CC------CHH-------HHHHHHHHHHHHTEE
T ss_pred ECcHHHHHHhhhccCCCceEEEECCCC-----cccC-----------cCch--hhhHH-------HHHHHHHHHHHhhCC
Confidence 55545554443 156789999986432 1211 0111 01221 344444 88999
Q ss_pred cCceEEEEecc
Q 037735 185 PGGLAALVMFS 195 (329)
Q Consensus 185 pGG~l~~~~~g 195 (329)
|||+|++..-.
T Consensus 306 pgGilv~qs~s 316 (364)
T 2qfm_A 306 QDGKYFTQGNC 316 (364)
T ss_dssp EEEEEEEEEEE
T ss_pred CCcEEEEEcCC
Confidence 99999988643
No 262
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=96.48 E-value=0.017 Score=58.37 Aligned_cols=141 Identities=13% Similarity=0.178 Sum_probs=72.0
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC--CCCcceeeeccccccc-
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL--PQSRSYYAAGVPGSFY- 117 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l--~~~~~~f~~gvpgsFy- 117 (329)
+.+.+|+|.+||||.+...+...+.+.-...-..........+++..|+-.....-.-.++ .....-+ .-.-|+++
T Consensus 243 p~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i-~i~~gDtL~ 321 (544)
T 3khk_A 243 PYKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNF-GKKNADSFL 321 (544)
T ss_dssp CCSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBC-CSSSCCTTT
T ss_pred cCCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCccc-ceeccchhc
Confidence 3445999999999988777765443221110000000001368999999765544432222 1101111 00223443
Q ss_pred cccCCCCceeEEEec--cce-ecccCCCCCCCCccceeecC-------CcHHHHHHHHHHHhhcHHHHHHHHHHHhccCc
Q 037735 118 SSLFPKSSLHFVHSS--YTL-HWLSKVPKVDGVEGSIQTRR-------FVNEVMEAYAAQFNNDFQTFLNTRAQELVPGG 187 (329)
Q Consensus 118 ~~lfp~~s~dl~~Ss--~al-hWLs~~p~~~~n~g~i~~~~-------~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG 187 (329)
...++...+|+|+++ +.. .|-......+ .+..+.. .++. ...|+ .|+.+..+-|+|||
T Consensus 322 ~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d---~r~~~g~~~~~~~~~~~~--------~~~~~-~Fl~~~l~~Lk~gG 389 (544)
T 3khk_A 322 DDQHPDLRADFVMTNPPFNMKDWWHEKLADD---PRWTINTNGEKRILTPPT--------GNANF-AWMLHMLYHLAPTG 389 (544)
T ss_dssp SCSCTTCCEEEEEECCCSSCCSCCCGGGTTC---GGGEECCC--CEECCCCT--------TCTHH-HHHHHHHHTEEEEE
T ss_pred CcccccccccEEEECCCcCCccccchhhhhh---hhhhcCcccccccccCCC--------cchhH-HHHHHHHHHhccCc
Confidence 334677899999996 332 3533211000 0100000 0100 01122 68999999999999
Q ss_pred eEEEEec
Q 037735 188 LAALVMF 194 (329)
Q Consensus 188 ~l~~~~~ 194 (329)
++++.++
T Consensus 390 r~aiVlP 396 (544)
T 3khk_A 390 SMALLLA 396 (544)
T ss_dssp EEEEEEE
T ss_pred eEEEEec
Confidence 9999984
No 263
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=96.23 E-value=0.011 Score=54.98 Aligned_cols=107 Identities=15% Similarity=0.046 Sum_probs=62.2
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC---C-c-ceeeecccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ---S-R-SYYAAGVPGSF 116 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~---~-~-~~f~~gvpgsF 116 (329)
...+|+|||||.|..|..++. + .+...++..|+-.+. ....++. . . .++..++ +.
T Consensus 90 ~~~~VLDLGaAPGGWsQvAa~--------~-------~gv~sV~GvdvG~d~---~~~pi~~~~~g~~ii~~~~~~--dv 149 (282)
T 3gcz_A 90 PTGIVVDLGCGRGGWSYYAAS--------L-------KNVKKVMAFTLGVQG---HEKPIMRTTLGWNLIRFKDKT--DV 149 (282)
T ss_dssp CCEEEEEETCTTCHHHHHHHT--------S-------TTEEEEEEECCCCTT---SCCCCCCCBTTGGGEEEECSC--CG
T ss_pred CCCEEEEeCCCCCHHHHHHHH--------h-------cCCCeeeeEEeccCc---cccccccccCCCceEEeeCCc--ch
Confidence 346899999999999998763 1 122346666765431 0111110 0 0 1122221 22
Q ss_pred ccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccC--ceEEEEec
Q 037735 117 YSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPG--GLAALVMF 194 (329)
Q Consensus 117 y~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pG--G~l~~~~~ 194 (329)
.-++++.+|+|+|-.|.+ +-.+ .+ +.+.. -++ |....+.|+|| |.+++-+|
T Consensus 150 --~~l~~~~~DvVLSDmApn--sG~~----------------~~-D~~rs---~~L---L~~A~~~Lk~g~~G~Fv~KvF 202 (282)
T 3gcz_A 150 --FNMEVIPGDTLLCDIGES--SPSI----------------AV-EEQRT---LRV---LNCAKQWLQEGNYTEFCIKVL 202 (282)
T ss_dssp --GGSCCCCCSEEEECCCCC--CSCH----------------HH-HHHHH---HHH---HHHHHHHHHHHCCCEEEEEES
T ss_pred --hhcCCCCcCEEEecCccC--CCCh----------------HH-HHHHH---HHH---HHHHHHHcCCCCCCcEEEEEe
Confidence 236778999999988876 3221 11 11111 122 77778899999 99999987
Q ss_pred c
Q 037735 195 S 195 (329)
Q Consensus 195 g 195 (329)
-
T Consensus 203 ~ 203 (282)
T 3gcz_A 203 C 203 (282)
T ss_dssp C
T ss_pred c
Confidence 6
No 264
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=96.13 E-value=0.0097 Score=55.79 Aligned_cols=73 Identities=14% Similarity=0.099 Sum_probs=46.4
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC---CCcceeeecccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP---QSRSYYAAGVPGSFYS 118 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~---~~~~~f~~gvpgsFy~ 118 (329)
...+|+|+|||+|.-|..+...+ .+..+|+.+|+.......+-+++. -..-.++.+ ++.+
T Consensus 102 ~g~~VLDlcaG~G~kt~~la~~~--------------~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~---D~~~ 164 (309)
T 2b9e_A 102 PGSHVIDACAAPGNKTSHLAALL--------------KNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEE---DFLA 164 (309)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHH--------------TTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEEC---CGGG
T ss_pred CCCEEEEeCCChhHHHHHHHHHh--------------CCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeC---ChHh
Confidence 34689999999999999987632 223589999998877776655542 111234443 4432
Q ss_pred ccCC---CCceeEEEe
Q 037735 119 SLFP---KSSLHFVHS 131 (329)
Q Consensus 119 ~lfp---~~s~dl~~S 131 (329)
-... .+++|.|+.
T Consensus 165 ~~~~~~~~~~fD~Vl~ 180 (309)
T 2b9e_A 165 VSPSDPRYHEVHYILL 180 (309)
T ss_dssp SCTTCGGGTTEEEEEE
T ss_pred cCccccccCCCCEEEE
Confidence 2111 146898874
No 265
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=96.12 E-value=0.004 Score=57.62 Aligned_cols=45 Identities=13% Similarity=0.081 Sum_probs=32.6
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCc-cceEEecCCCcchHHhhhhc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAI-EFQVFFNDHSDNDFNTLFKS 100 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~p-e~~v~~nDLp~ndfn~lf~~ 100 (329)
...+|+|+|||+|..|..+.... .. ..+|+..|+-..+...+-+.
T Consensus 42 ~~~~VLEIG~G~G~lt~~La~~~--------------~~~~~~V~avDid~~~l~~a~~~ 87 (279)
T 3uzu_A 42 RGERMVEIGPGLGALTGPVIARL--------------ATPGSPLHAVELDRDLIGRLEQR 87 (279)
T ss_dssp TTCEEEEECCTTSTTHHHHHHHH--------------CBTTBCEEEEECCHHHHHHHHHH
T ss_pred CcCEEEEEccccHHHHHHHHHhC--------------CCcCCeEEEEECCHHHHHHHHHh
Confidence 45789999999999999998622 11 13589999987666655443
No 266
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=96.03 E-value=0.073 Score=56.23 Aligned_cols=123 Identities=13% Similarity=0.061 Sum_probs=70.8
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhh--hhcCC------CCcceeeeccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTL--FKSLP------QSRSYYAAGVP 113 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~l--f~~l~------~~~~~f~~gvp 113 (329)
...+|+|.|||||.....+...+ .. ....+++..|+-....... -.++. ......+. .
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l--------~e----i~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~--~ 386 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGF--------NN----VMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTIT--G 386 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTS--------TT----CCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEE--C
T ss_pred CCCEEEECCCCccHHHHHHHHHh--------cc----cCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEE--e
Confidence 45799999999999877765421 11 1125899999976554433 11111 11111121 2
Q ss_pred ccccc-ccCCCCceeEEEeccceecccCCCCCCCCccceeec-CCcHHHHHHHHHHHhh-------------c-HHHHHH
Q 037735 114 GSFYS-SLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTR-RFVNEVMEAYAAQFNN-------------D-FQTFLN 177 (329)
Q Consensus 114 gsFy~-~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~-~~~~~~~~ay~~q~~~-------------D-~~~FL~ 177 (329)
+++.. ...+...+|+|+++ +| |.. ...+...+.|...+.. | ...|+.
T Consensus 387 dD~L~~~~~~~~kFDVVIgN--------PP---------Yg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe 449 (878)
T 3s1s_A 387 EDVCSLNPEDFANVSVVVMN--------PP---------YVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLE 449 (878)
T ss_dssp CCGGGCCGGGGTTEEEEEEC--------CB---------CCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHH
T ss_pred cchhcccccccCCCCEEEEC--------CC---------ccccccchhhhhhHHHHhhhhccccccccccccchHHHHHH
Confidence 34543 12456789999986 44 111 1122222333222211 2 567999
Q ss_pred HHHHHhccCceEEEEecc
Q 037735 178 TRAQELVPGGLAALVMFS 195 (329)
Q Consensus 178 ~ra~eL~pGG~l~~~~~g 195 (329)
+..+-|+|||++++.++.
T Consensus 450 ~Al~lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 450 LVTELVQDGTVISAIMPK 467 (878)
T ss_dssp HHHHHSCTTCEEEEEEET
T ss_pred HHHHhcCCCcEEEEEECh
Confidence 999999999999999863
No 267
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=95.90 E-value=0.009 Score=54.34 Aligned_cols=80 Identities=10% Similarity=-0.078 Sum_probs=49.0
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcc-eeeecccccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRS-YYAAGVPGSFYSSL 120 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~-~f~~gvpgsFy~~l 120 (329)
+..+|+|+|||+|..|. + . + .+..+|+..|+-..+...+-+.+....+ .++.| ++..--
T Consensus 21 ~~~~VLEIG~G~G~lt~-l-~--------~-------~~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~---D~~~~~ 80 (252)
T 1qyr_A 21 KGQAMVEIGPGLAALTE-P-V--------G-------ERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQ---DAMTFN 80 (252)
T ss_dssp TTCCEEEECCTTTTTHH-H-H--------H-------TTCSCEEEECCCHHHHHHHHTCTTTGGGEEEECS---CGGGCC
T ss_pred CcCEEEEECCCCcHHHH-h-h--------h-------CCCCeEEEEECCHHHHHHHHHHhccCCceEEEEC---chhhCC
Confidence 34689999999999999 4 2 1 1113499999987776666555432212 24443 454322
Q ss_pred CCC-----CceeEEEeccc--------eecccCC
Q 037735 121 FPK-----SSLHFVHSSYT--------LHWLSKV 141 (329)
Q Consensus 121 fp~-----~s~dl~~Ss~a--------lhWLs~~ 141 (329)
+|+ +..+.++|+.- +|||.+.
T Consensus 81 ~~~~~~~~~~~~~vvsNlPY~i~~~il~~ll~~~ 114 (252)
T 1qyr_A 81 FGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYT 114 (252)
T ss_dssp HHHHHHHHTSCEEEEEECCTTTHHHHHHHHHTTG
T ss_pred HHHhhcccCCceEEEECCCCCccHHHHHHHHhcC
Confidence 221 23578888865 6787653
No 268
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=95.90 E-value=0.0023 Score=58.19 Aligned_cols=43 Identities=14% Similarity=0.110 Sum_probs=32.9
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKS 100 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~ 100 (329)
+..+|+|+|||+|..|..+.+ .+..+|+..|+-......+-+.
T Consensus 31 ~~~~VLDiG~G~G~lt~~L~~----------------~~~~~v~avEid~~~~~~~~~~ 73 (249)
T 3ftd_A 31 EGNTVVEVGGGTGNLTKVLLQ----------------HPLKKLYVIELDREMVENLKSI 73 (249)
T ss_dssp TTCEEEEEESCHHHHHHHHTT----------------SCCSEEEEECCCHHHHHHHTTS
T ss_pred CcCEEEEEcCchHHHHHHHHH----------------cCCCeEEEEECCHHHHHHHHhc
Confidence 456899999999999999874 2225899999987766665544
No 269
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=95.87 E-value=0.011 Score=57.02 Aligned_cols=43 Identities=16% Similarity=0.168 Sum_probs=32.2
Q ss_pred ceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhc
Q 037735 43 TFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKS 100 (329)
Q Consensus 43 ~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~ 100 (329)
..+|+|+|||+|..++.+...+ +..+|+.+|+-......+-++
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~---------------~~~~V~avDi~~~av~~a~~N 90 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALET---------------PAEEVWLNDISEDAYELMKRN 90 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHS---------------SCSEEEEEESCHHHHHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhC---------------CCCeEEEEECCHHHHHHHHHH
Confidence 4689999999999999987521 224799999987665555443
No 270
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=95.85 E-value=0.012 Score=59.51 Aligned_cols=127 Identities=13% Similarity=-0.038 Sum_probs=68.5
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCC-------CccceEEecCCCcchHHhhhhcC--CCCc------c
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPS-------AIEFQVFFNDHSDNDFNTLFKSL--PQSR------S 106 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~-------~pe~~v~~nDLp~ndfn~lf~~l--~~~~------~ 106 (329)
...+|+|.+||||.+...+.+.+. +........ ....+++..|+-.....-.-.++ .... .
T Consensus 169 ~~~~VlDPaCGSG~fLi~a~~~l~----~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~ 244 (541)
T 2ar0_A 169 PREVVQDPAAGTAGFLIEADRYVK----SQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGG 244 (541)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHH----TTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTB
T ss_pred CCCeEecCCcccchHHHHHHHHHH----HhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccC
Confidence 357999999999999888776442 111000000 01247899998655544432221 1111 1
Q ss_pred eeeeccccccccc-cCCCCceeEEEecc--ceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHh
Q 037735 107 YYAAGVPGSFYSS-LFPKSSLHFVHSSY--TLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQEL 183 (329)
Q Consensus 107 ~f~~gvpgsFy~~-lfp~~s~dl~~Ss~--alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL 183 (329)
-+..| ++... ..+...+|+|+++= ...|-.+ ...++. ...+. .| ..|+....+-|
T Consensus 245 ~I~~g---DtL~~~~~~~~~fD~Vv~NPPf~~~~~~~-~~~~~~-----~~~~~------------~~-~~Fl~~~l~~L 302 (541)
T 2ar0_A 245 AIRLG---NTLGSDGENLPKAHIVATNPPFGSAAGTN-ITRTFV-----HPTSN------------KQ-LCFMQHIIETL 302 (541)
T ss_dssp SEEES---CTTSHHHHTSCCEEEEEECCCCTTCSSCC-CCSCCS-----SCCSC------------HH-HHHHHHHHHHE
T ss_pred CeEeC---CCcccccccccCCeEEEECCCcccccchh-hHhhcC-----CCCCc------------hH-HHHHHHHHHHh
Confidence 23333 33332 24567899999872 2222111 000110 00011 12 27899999999
Q ss_pred ccCceEEEEec
Q 037735 184 VPGGLAALVMF 194 (329)
Q Consensus 184 ~pGG~l~~~~~ 194 (329)
+|||++++.++
T Consensus 303 k~gGr~a~V~p 313 (541)
T 2ar0_A 303 HPGGRAAVVVP 313 (541)
T ss_dssp EEEEEEEEEEE
T ss_pred CCCCEEEEEec
Confidence 99999999985
No 271
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=95.83 E-value=0.053 Score=54.71 Aligned_cols=125 Identities=15% Similarity=0.188 Sum_probs=73.0
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC--CC---Ccceeeecccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL--PQ---SRSYYAAGVPGSF 116 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l--~~---~~~~f~~gvpgsF 116 (329)
...+|+|.+||||.+...+.+.+ .. .+..+++..|+-...+.-.-.++ .. ...-... |++
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l--------~~----~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~---gDt 285 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYS--------RQ----PQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHN---ADT 285 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHC--------SC----TTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEE---SCT
T ss_pred CCCEEeecccchhHHHHHHHHHH--------Hh----ccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEe---cce
Confidence 45799999999999988877533 10 12468999999765544433221 11 1111233 345
Q ss_pred ccc---cCCCCceeEEEec--cceecccCCCCC-C--CC-ccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhc-cC
Q 037735 117 YSS---LFPKSSLHFVHSS--YTLHWLSKVPKV-D--GV-EGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELV-PG 186 (329)
Q Consensus 117 y~~---lfp~~s~dl~~Ss--~alhWLs~~p~~-~--~n-~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~-pG 186 (329)
+.. .++...+|+|+++ |...|-...... + |. -|.+ ++ ....|+ .|+.+..+-|+ ||
T Consensus 286 L~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~-----~~--------~s~~~~-~Fl~~~l~~Lk~~g 351 (542)
T 3lkd_A 286 LDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKL-----AP--------KSKADF-AFLLHGYYHLKQDN 351 (542)
T ss_dssp TTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSC-----CC--------TTCCHH-HHHHHHHHTBCTTT
T ss_pred ecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhc-----CC--------CchhhH-HHHHHHHHHhCCCc
Confidence 444 2567889999998 555562110000 0 11 0100 00 011233 69999999999 99
Q ss_pred ceEEEEecc
Q 037735 187 GLAALVMFS 195 (329)
Q Consensus 187 G~l~~~~~g 195 (329)
|++++.++.
T Consensus 352 Gr~a~VlP~ 360 (542)
T 3lkd_A 352 GVMAIVLPH 360 (542)
T ss_dssp CEEEEEEET
T ss_pred eeEEEEecc
Confidence 999999863
No 272
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=95.62 E-value=0.0093 Score=61.99 Aligned_cols=107 Identities=14% Similarity=0.071 Sum_probs=59.6
Q ss_pred HHHhHHHHHHHHHhHhhHHHHHhhcccCCCCCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCC
Q 037735 11 ASNSAYQSIQVYILRYDPRTAVTDLGTNAVPNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHS 90 (329)
Q Consensus 11 ~~nS~~Q~~~~~~~~~~l~~ai~~i~~~~~~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp 90 (329)
.+....|+++..+++++..+ ..+..+|+|+|||+|+++...+.+.-.+ ..+++.. .......||..+-.
T Consensus 387 vRy~~Y~~AI~~al~d~~~~---------~~~~~VVldVGaGtGpLs~~al~A~~~a-~~~~~~~-~~~~~~kVyAVEkn 455 (745)
T 3ua3_A 387 IKYDVYGEAVVGALKDLGAD---------GRKTVVIYLLGGGRGPIGTKILKSEREY-NNTFRQG-QESLKVKLYIVEKN 455 (745)
T ss_dssp HHHHHHHHHHHHHHHHHHTT---------CCSEEEEEEESCTTCHHHHHHHHHHHHH-HHHHSTT-SCCCEEEEEEEECC
T ss_pred hhHHHHHHHHHHHHHHhhcc---------cCCCcEEEEECCCCCHHHHHHHHHHHHh-Ccccccc-ccccccEEEEEeCC
Confidence 45666777777766665431 1346789999999999988776544211 1011110 01123689998885
Q ss_pred cchHHhhhhc----CCCCcceeeeccccccccccCC-----CCceeEEEec
Q 037735 91 DNDFNTLFKS----LPQSRSYYAAGVPGSFYSSLFP-----KSSLHFVHSS 132 (329)
Q Consensus 91 ~ndfn~lf~~----l~~~~~~f~~gvpgsFy~~lfp-----~~s~dl~~Ss 132 (329)
.|-.-++-+. +.+ +-..+. |+..+--+| +..+|+++|=
T Consensus 456 p~A~~~l~~~~~Ng~~d-~VtVI~---gd~eev~lp~~~~~~ekVDIIVSE 502 (745)
T 3ua3_A 456 PNAIVTLKYMNVRTWKR-RVTIIE---SDMRSLPGIAKDRGFEQPDIIVSE 502 (745)
T ss_dssp HHHHHHHHHHHHHTTTT-CSEEEE---SCGGGHHHHHHHTTCCCCSEEEEC
T ss_pred hHHHHHHHHHHhcCCCC-eEEEEe---CchhhcccccccCCCCcccEEEEe
Confidence 5444343222 211 222333 345222254 6789999984
No 273
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=95.50 E-value=0.059 Score=50.32 Aligned_cols=111 Identities=13% Similarity=0.098 Sum_probs=62.9
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHH-hh-hhcCCCCcceeeecccccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFN-TL-FKSLPQSRSYYAAGVPGSFYS 118 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn-~l-f~~l~~~~~~f~~gvpgsFy~ 118 (329)
.+..+|+|||||+|..|..+++. .+-..|+..|+..++-. .. ...+...-..+-.++ +++
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~~---------------~gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~--di~- 141 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAAQ---------------KEVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKS--NVF- 141 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTS---------------TTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSC--CTT-
T ss_pred CCCCEEEEcCCCCCHHHHHHHHh---------------cCCceeeeEEeccccccccccccccCCceEEeecCc--eee-
Confidence 45689999999999999998741 11135666777543200 00 000000001112222 332
Q ss_pred ccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccC-ceEEEEecc
Q 037735 119 SLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPG-GLAALVMFS 195 (329)
Q Consensus 119 ~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pG-G~l~~~~~g 195 (329)
-++++.+|+++|-.|-+ +-.+ + ...|.. .++ |....+.|+|| |.+++-+|-
T Consensus 142 -~l~~~~~DlVlsD~APn--sG~~----------------~-~D~~rs---~~L---L~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 142 -TMPTEPSDTLLCDIGES--SSNP----------------L-VERDRT---MKV---LENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp -TSCCCCCSEEEECCCCC--CSSH----------------H-HHHHHH---HHH---HHHHHHHCCTTCCEEEEEESS
T ss_pred -ecCCCCcCEEeecCcCC--CCCH----------------H-HHHHHH---HHH---HHHHHHHhcCCCCcEEEEecc
Confidence 25667899999987655 2211 1 122211 122 77778899999 999999876
No 274
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=95.49 E-value=0.011 Score=57.22 Aligned_cols=87 Identities=7% Similarity=-0.062 Sum_probs=50.3
Q ss_pred CceEEEeeeCCCCcccHHHHHHHH-----------------------HHHHHHhhhcCCCCccceEEecCCCcchHHhhh
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNII-----------------------DSVELKFQHECPSAIEFQVFFNDHSDNDFNTLF 98 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii-----------------------~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf 98 (329)
+..+|+|.+||||...+.+..... +.+++.........++.+|+..|....+....-
T Consensus 201 ~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar 280 (393)
T 3k0b_A 201 PDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAK 280 (393)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHH
Confidence 346899999999998877654221 111111111111133467999999877766654
Q ss_pred hcCC---CC-cceeeeccccccccccCCCCceeEEEec
Q 037735 99 KSLP---QS-RSYYAAGVPGSFYSSLFPKSSLHFVHSS 132 (329)
Q Consensus 99 ~~l~---~~-~~~f~~gvpgsFy~~lfp~~s~dl~~Ss 132 (329)
+++. -. ...|..+ ++.+ +.++.++|+|+|+
T Consensus 281 ~Na~~~gl~~~I~~~~~---D~~~-~~~~~~fD~Iv~N 314 (393)
T 3k0b_A 281 QNAVEAGLGDLITFRQL---QVAD-FQTEDEYGVVVAN 314 (393)
T ss_dssp HHHHHTTCTTCSEEEEC---CGGG-CCCCCCSCEEEEC
T ss_pred HHHHHcCCCCceEEEEC---ChHh-CCCCCCCCEEEEC
Confidence 4432 11 1234443 5644 4345689999986
No 275
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=95.47 E-value=0.017 Score=55.05 Aligned_cols=40 Identities=8% Similarity=0.095 Sum_probs=29.4
Q ss_pred eEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhc
Q 037735 44 FRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKS 100 (329)
Q Consensus 44 ~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~ 100 (329)
.+|+|+|||+|..|+.+.. . . .+|+..|.........-++
T Consensus 215 ~~vLDl~cG~G~~~l~la~--------~-------~--~~V~gvd~~~~ai~~a~~n 254 (369)
T 3bt7_A 215 GDLLELYCGNGNFSLALAR--------N-------F--DRVLATEIAKPSVAAAQYN 254 (369)
T ss_dssp SEEEEESCTTSHHHHHHGG--------G-------S--SEEEEECCCHHHHHHHHHH
T ss_pred CEEEEccCCCCHHHHHHHh--------c-------C--CEEEEEECCHHHHHHHHHH
Confidence 5799999999999997753 1 1 3789999987665554433
No 276
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=95.46 E-value=0.024 Score=55.05 Aligned_cols=130 Identities=12% Similarity=0.057 Sum_probs=76.8
Q ss_pred CCCcchHHHhHHHHHHHHHhHhhHHHHHhhcccCCCCCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceE
Q 037735 5 DGAHSYASNSAYQSIQVYILRYDPRTAVTDLGTNAVPNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQV 84 (329)
Q Consensus 5 ~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~i~~~~~~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v 84 (329)
.....|+-+...=+.....+...+... ..+..+|+|++||+|..++.+.+.. ..-.+|
T Consensus 23 ~~~~Ffn~~~~~nR~l~~~~~~~~~~~--------~~~g~~VLDlfaGtG~~sl~aa~~~--------------~ga~~V 80 (392)
T 3axs_A 23 DMPVFYNPRMRVNRDLAVLGLEYLCKK--------LGRPVKVADPLSASGIRAIRFLLET--------------SCVEKA 80 (392)
T ss_dssp TCCSSCCGGGHHHHHHHHHHHHHHHHH--------HCSCEEEEESSCTTSHHHHHHHHHC--------------SCEEEE
T ss_pred CCCEEEcCCcHHHHHHHHHHHHHHhhc--------cCCCCEEEECCCcccHHHHHHHHhC--------------CCCCEE
Confidence 356777555554444443333333210 0234789999999999999987521 011379
Q ss_pred EecCCCcchHHhhhhcCC--CC--c-ceeeecccccccc-ccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcH
Q 037735 85 FFNDHSDNDFNTLFKSLP--QS--R-SYYAAGVPGSFYS-SLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVN 158 (329)
Q Consensus 85 ~~nDLp~ndfn~lf~~l~--~~--~-~~f~~gvpgsFy~-~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~ 158 (329)
+++|+-..-...+-+++. .. + ..++.|....+.. ++ .+.+|+|+..- +.. +
T Consensus 81 ~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~--~~~fD~V~lDP--------~g~------------~- 137 (392)
T 3axs_A 81 YANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEW--GFGFDYVDLDP--------FGT------------P- 137 (392)
T ss_dssp EEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCC--SSCEEEEEECC--------SSC------------C-
T ss_pred EEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhh--CCCCcEEEECC--------CcC------------H-
Confidence 999998766666555432 11 1 2345554333322 22 45789887632 210 1
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEe
Q 037735 159 EVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVM 193 (329)
Q Consensus 159 ~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~ 193 (329)
..|+..-.+-|+|||+|+++.
T Consensus 138 --------------~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 138 --------------VPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp --------------HHHHHHHHHHEEEEEEEEEEE
T ss_pred --------------HHHHHHHHHHhCCCCEEEEEe
Confidence 246777788899999888876
No 277
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=95.39 E-value=0.031 Score=53.99 Aligned_cols=87 Identities=10% Similarity=0.004 Sum_probs=49.8
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHH-----------------------HHHHHhhhcCCCCccceEEecCCCcchHHhhh
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIID-----------------------SVELKFQHECPSAIEFQVFFNDHSDNDFNTLF 98 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~-----------------------~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf 98 (329)
+...|+|.+||||...+.+.....+ .+++.-.......++.+++..|.-..+....-
T Consensus 194 ~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar 273 (384)
T 3ldg_A 194 PDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIAR 273 (384)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHH
Confidence 3468999999999988776642211 11111111111123467999999877766655
Q ss_pred hcCCC---C-cceeeeccccccccccCCCCceeEEEec
Q 037735 99 KSLPQ---S-RSYYAAGVPGSFYSSLFPKSSLHFVHSS 132 (329)
Q Consensus 99 ~~l~~---~-~~~f~~gvpgsFy~~lfp~~s~dl~~Ss 132 (329)
+++.. . ..-|..+ ++.+ +.++.++|+|+|+
T Consensus 274 ~Na~~~gl~~~I~~~~~---D~~~-l~~~~~fD~Iv~N 307 (384)
T 3ldg_A 274 KNAREVGLEDVVKLKQM---RLQD-FKTNKINGVLISN 307 (384)
T ss_dssp HHHHHTTCTTTEEEEEC---CGGG-CCCCCCSCEEEEC
T ss_pred HHHHHcCCCCceEEEEC---ChHH-CCccCCcCEEEEC
Confidence 44321 1 1234443 5644 4344689999975
No 278
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=94.93 E-value=0.039 Score=53.13 Aligned_cols=87 Identities=11% Similarity=0.108 Sum_probs=50.6
Q ss_pred CceEEEeeeCCCCcccHHHHHHHH-----------------------HHHHHHhhhcCCCCccceEEecCCCcchHHhhh
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNII-----------------------DSVELKFQHECPSAIEFQVFFNDHSDNDFNTLF 98 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii-----------------------~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf 98 (329)
+..+|+|.|||||...+.+..... +.+++.........++.+|+..|+-.......-
T Consensus 195 ~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar 274 (385)
T 3ldu_A 195 AGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIAR 274 (385)
T ss_dssp TTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHH
Confidence 347899999999998887764321 112111111111134468999999877766654
Q ss_pred hcCCC---C-cceeeeccccccccccCCCCceeEEEec
Q 037735 99 KSLPQ---S-RSYYAAGVPGSFYSSLFPKSSLHFVHSS 132 (329)
Q Consensus 99 ~~l~~---~-~~~f~~gvpgsFy~~lfp~~s~dl~~Ss 132 (329)
+++.. . ..-|..+ ++.+ +.++.++|+|+++
T Consensus 275 ~Na~~~gl~~~i~~~~~---D~~~-l~~~~~~D~Iv~N 308 (385)
T 3ldu_A 275 ENAEIAGVDEYIEFNVG---DATQ-FKSEDEFGFIITN 308 (385)
T ss_dssp HHHHHHTCGGGEEEEEC---CGGG-CCCSCBSCEEEEC
T ss_pred HHHHHcCCCCceEEEEC---Chhh-cCcCCCCcEEEEC
Confidence 44321 1 1224443 5644 4445689999975
No 279
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=94.32 E-value=0.032 Score=52.14 Aligned_cols=73 Identities=11% Similarity=0.067 Sum_probs=47.9
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC--Ccceeeeccccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ--SRSYYAAGVPGSFYSS 119 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~--~~~~f~~gvpgsFy~~ 119 (329)
+..+|+|+|||+|..|..+++ + .|..+|+..|.........-+.+.. .+-.|+.| +|.+-
T Consensus 26 ~g~~vLD~g~G~G~~s~~la~--------~-------~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~---d~~~l 87 (301)
T 1m6y_A 26 DEKIILDCTVGEGGHSRAILE--------H-------CPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKV---SYREA 87 (301)
T ss_dssp TTCEEEETTCTTSHHHHHHHH--------H-------CTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEEC---CGGGH
T ss_pred CCCEEEEEeCCcCHHHHHHHH--------H-------CCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEC---CHHHH
Confidence 346899999999999999886 2 1236899999988777665554432 22334544 56321
Q ss_pred --cCCC---CceeEEEec
Q 037735 120 --LFPK---SSLHFVHSS 132 (329)
Q Consensus 120 --lfp~---~s~dl~~Ss 132 (329)
.++. +++|.++..
T Consensus 88 ~~~l~~~g~~~~D~Vl~D 105 (301)
T 1m6y_A 88 DFLLKTLGIEKVDGILMD 105 (301)
T ss_dssp HHHHHHTTCSCEEEEEEE
T ss_pred HHHHHhcCCCCCCEEEEc
Confidence 1222 578988863
No 280
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=92.24 E-value=0.49 Score=49.11 Aligned_cols=125 Identities=11% Similarity=0.017 Sum_probs=69.1
Q ss_pred CceEEEeeeCCCCcccHHHHHHH----------------------------HHHHHHHhhhcCCCCccceEEecCCCcch
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNI----------------------------IDSVELKFQHECPSAIEFQVFFNDHSDND 93 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~i----------------------------i~~~~~~~~~~~~~~pe~~v~~nDLp~nd 93 (329)
...+|+|.+||||...+.+.... .+....+.... ...++.+++..|+-...
T Consensus 190 ~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~-~~~~~~~i~G~Did~~a 268 (703)
T 3v97_A 190 PGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKG-LAEYSSHFYGSDSDARV 268 (703)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHH-HHHCCCCEEEEESCHHH
T ss_pred CCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhc-cccCCccEEEEECCHHH
Confidence 34689999999999887765422 11111110000 00133589999998777
Q ss_pred HHhhhhcCC--C-C-cceeeeccccccccccCC--CCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHH
Q 037735 94 FNTLFKSLP--Q-S-RSYYAAGVPGSFYSSLFP--KSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQ 167 (329)
Q Consensus 94 fn~lf~~l~--~-~-~~~f~~gvpgsFy~~lfp--~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q 167 (329)
....-+++. . . ..-|..+ ++.+...| .+++|+|+++ +|=. . ++ +..+++.+.|+.
T Consensus 269 v~~A~~N~~~agv~~~i~~~~~---D~~~~~~~~~~~~~d~Iv~N--------PPYG---~-Rl---g~~~~l~~ly~~- 329 (703)
T 3v97_A 269 IQRARTNARLAGIGELITFEVK---DVAQLTNPLPKGPYGTVLSN--------PPYG---E-RL---DSEPALIALHSL- 329 (703)
T ss_dssp HHHHHHHHHHTTCGGGEEEEEC---CGGGCCCSCTTCCCCEEEEC--------CCCC---C-------CCHHHHHHHHH-
T ss_pred HHHHHHHHHHcCCCCceEEEEC---ChhhCccccccCCCCEEEeC--------CCcc---c-cc---cchhHHHHHHHH-
Confidence 665544432 1 1 1234443 56443223 3389999986 3311 0 00 223445555543
Q ss_pred HhhcHHHHHHHHHHHhccCceEEEEec
Q 037735 168 FNNDFQTFLNTRAQELVPGGLAALVMF 194 (329)
Q Consensus 168 ~~~D~~~FL~~ra~eL~pGG~l~~~~~ 194 (329)
|....+.+.|||.+++.+.
T Consensus 330 --------l~~~lk~~~~g~~~~ilt~ 348 (703)
T 3v97_A 330 --------LGRIMKNQFGGWNLSLFSA 348 (703)
T ss_dssp --------HHHHHHHHCTTCEEEEEES
T ss_pred --------HHHHHHhhCCCCeEEEEeC
Confidence 6677777889999999875
No 281
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=91.47 E-value=0.94 Score=42.36 Aligned_cols=110 Identities=15% Similarity=0.129 Sum_probs=58.4
Q ss_pred ceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHH--hhhhcCCCCcceeeecccccccccc
Q 037735 43 TFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFN--TLFKSLPQSRSYYAAGVPGSFYSSL 120 (329)
Q Consensus 43 ~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn--~lf~~l~~~~~~f~~gvpgsFy~~l 120 (329)
..+|+|||||+|..|..... . ..+ -.|+.-|+-.++-. .+++.+.-.--.|..++ ++ ..
T Consensus 95 ~~~VlDLGaapGGwsq~~~~--------~------~gv-~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~--Dv-~~- 155 (321)
T 3lkz_A 95 VGKVIDLGCGRGGWCYYMAT--------Q------KRV-QEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGV--DV-FY- 155 (321)
T ss_dssp CEEEEEETCTTCHHHHHHTT--------C------TTE-EEEEEECCCSTTSCCCCCCCBTTGGGEEEECSC--CT-TS-
T ss_pred CCEEEEeCCCCCcHHHHHHh--------h------cCC-CEEEEEEcCCCCccCcchhhhcCCcceEEEecc--CH-hh-
Confidence 45999999999999986653 1 022 27999999876311 12222221112233333 33 22
Q ss_pred CCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccC-ceEEEEeccc
Q 037735 121 FPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPG-GLAALVMFSV 196 (329)
Q Consensus 121 fp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pG-G~l~~~~~g~ 196 (329)
+++..+|+++|-.+ + ++..|++-++ +.+ +-|..-.+-|++| |-+++=.|.+
T Consensus 156 l~~~~~D~ivcDig--------e----------Ss~~~~ve~~------Rtl-~vLel~~~wL~~~~~~f~~KVl~p 207 (321)
T 3lkz_A 156 RPSECCDTLLCDIG--------E----------SSSSAEVEEH------RTI-RVLEMVEDWLHRGPREFCVKVLCP 207 (321)
T ss_dssp SCCCCCSEEEECCC--------C----------CCSCHHHHHH------HHH-HHHHHHHHHHTTCCCEEEEEESCT
T ss_pred CCCCCCCEEEEECc--------c----------CCCChhhhhh------HHH-HHHHHHHHHhccCCCcEEEEEcCC
Confidence 23355888776544 1 1223332211 111 1466666677777 7777766654
No 282
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=90.47 E-value=0.73 Score=42.50 Aligned_cols=22 Identities=9% Similarity=0.037 Sum_probs=17.9
Q ss_pred CCceEEEeeeCCCCcccHHHHH
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQ 62 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~ 62 (329)
..+-+|+|+||+.|..++.+..
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~ 126 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRG 126 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHH
T ss_pred CCCCcEEEeecCchHHHHHHHH
Confidence 4578999999999998777543
No 283
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=89.82 E-value=0.44 Score=40.08 Aligned_cols=35 Identities=9% Similarity=0.072 Sum_probs=26.5
Q ss_pred CceEEEeeeCCCCc-ccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcc
Q 037735 42 NTFRIADFGCSTGP-NTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDN 92 (329)
Q Consensus 42 ~~~~IaDlGCstG~-nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~n 92 (329)
.+.+|+|+|||.|. ++..|.. + ..+.|+..|+...
T Consensus 35 ~~~rVlEVG~G~g~~vA~~La~--------~--------~g~~V~atDInp~ 70 (153)
T 2k4m_A 35 PGTRVVEVGAGRFLYVSDYIRK--------H--------SKVDLVLTDIKPS 70 (153)
T ss_dssp SSSEEEEETCTTCCHHHHHHHH--------H--------SCCEEEEECSSCS
T ss_pred CCCcEEEEccCCChHHHHHHHH--------h--------CCCeEEEEECCcc
Confidence 35799999999995 8888863 1 1368999998543
No 284
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=89.53 E-value=0.82 Score=41.87 Aligned_cols=112 Identities=12% Similarity=0.083 Sum_probs=58.9
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeecccc-ccccc
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPG-SFYSS 119 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpg-sFy~~ 119 (329)
.+-.+|+||||+-|.=|..+.+.. ... ...-.++..|++.+.... ++. .--|+.-..| +|++
T Consensus 72 kpg~~VVDLGaAPGGWSQvAa~~~------~vg-----~V~G~vig~D~~~~P~~~----~~~-Gv~~i~~~~G~Df~~- 134 (269)
T 2px2_A 72 QPIGKVVDLGCGRGGWSYYAATMK------NVQ-----EVRGYTKGGPGHEEPMLM----QSY-GWNIVTMKSGVDVFY- 134 (269)
T ss_dssp CCCEEEEEETCTTSHHHHHHTTST------TEE-----EEEEECCCSTTSCCCCCC----CST-TGGGEEEECSCCGGG-
T ss_pred CCCCEEEEcCCCCCHHHHHHhhhc------CCC-----CceeEEEccccccCCCcc----cCC-CceEEEeeccCCccC-
Confidence 346899999999999888876410 000 001356677743211000 000 1111111113 7876
Q ss_pred cCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCc-eEEEEecc
Q 037735 120 LFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGG-LAALVMFS 195 (329)
Q Consensus 120 lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG-~l~~~~~g 195 (329)
+++..+|+|+|=.|=. +..+.+.++ +. +. -|....+.|+||| .+++=.|-
T Consensus 135 -~~~~~~DvVLSDMAPn------------------SG~~~vD~~-Rs-----~~-aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 135 -KPSEISDTLLCDIGES------------------SPSAEIEEQ-RT-----LR-ILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp -SCCCCCSEEEECCCCC------------------CSCHHHHHH-HH-----HH-HHHHHHHHHTTCCSEEEEEESC
T ss_pred -CCCCCCCEEEeCCCCC------------------CCccHHHHH-HH-----HH-HHHHHHHHhhcCCcEEEEEECC
Confidence 4455799998755421 111222111 10 00 3555668999999 88888876
No 285
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=89.38 E-value=0.47 Score=45.65 Aligned_cols=72 Identities=13% Similarity=0.135 Sum_probs=48.6
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeeccccccccccC
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYSSLF 121 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~~lf 121 (329)
.-.+++|+||++|.-|..+++ + ...|+..|.-.=+ ......+ +-.+.- ++.+....
T Consensus 211 ~G~~vlDLGAaPGGWT~~l~~--------r---------g~~V~aVD~~~l~--~~l~~~~--~V~~~~---~d~~~~~~ 266 (375)
T 4auk_A 211 NGMWAVDLGACPGGWTYQLVK--------R---------NMWVYSVDNGPMA--QSLMDTG--QVTWLR---EDGFKFRP 266 (375)
T ss_dssp TTCEEEEETCTTCHHHHHHHH--------T---------TCEEEEECSSCCC--HHHHTTT--CEEEEC---SCTTTCCC
T ss_pred CCCEEEEeCcCCCHHHHHHHH--------C---------CCEEEEEEhhhcC--hhhccCC--CeEEEe---CccccccC
Confidence 347899999999999999875 2 2589999964322 1112222 223443 45666666
Q ss_pred CCCceeEEEeccceec
Q 037735 122 PKSSLHFVHSSYTLHW 137 (329)
Q Consensus 122 p~~s~dl~~Ss~alhW 137 (329)
+.+.+|+++|=.+.+|
T Consensus 267 ~~~~~D~vvsDm~~~p 282 (375)
T 4auk_A 267 TRSNISWMVCDMVEKP 282 (375)
T ss_dssp CSSCEEEEEECCSSCH
T ss_pred CCCCcCEEEEcCCCCh
Confidence 7788999999777665
No 286
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=88.78 E-value=0.18 Score=49.07 Aligned_cols=70 Identities=13% Similarity=0.191 Sum_probs=44.3
Q ss_pred ceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC----C-Ccceeeeccccccc
Q 037735 43 TFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP----Q-SRSYYAAGVPGSFY 117 (329)
Q Consensus 43 ~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~----~-~~~~f~~gvpgsFy 117 (329)
..+|+|+|||+|..++.+.. . ..+|+..|.........-.++. . .+--|+.| ++.
T Consensus 94 g~~VLDLgcG~G~~al~LA~--------~---------g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~---Da~ 153 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMS--------K---------ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTG---DFK 153 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHT--------T---------CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEES---CGG
T ss_pred CCEEEEeCCCchHHHHHHHh--------c---------CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEEC---cHH
Confidence 36899999999999887753 1 1479999998776665544332 1 12235554 443
Q ss_pred ccc--CCCCceeEEEec
Q 037735 118 SSL--FPKSSLHFVHSS 132 (329)
Q Consensus 118 ~~l--fp~~s~dl~~Ss 132 (329)
+-+ ++++++|+|++.
T Consensus 154 ~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 154 EYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp GSHHHHHHHCCSEEEEC
T ss_pred HhhhhccCCCceEEEEC
Confidence 322 234689999853
No 287
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=86.58 E-value=0.93 Score=41.21 Aligned_cols=73 Identities=12% Similarity=0.118 Sum_probs=41.8
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHH--hhhhcCCCCcceeeeccccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFN--TLFKSLPQSRSYYAAGVPGSFYSS 119 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn--~lf~~l~~~~~~f~~gvpgsFy~~ 119 (329)
...+|+|||||+|..|..... . ..+ -.|+.-|+-..+-. .+++++.-..-.|..|| ++ .+
T Consensus 78 ~g~~VvDLGaapGGWSq~~a~--------~------~g~-~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gv--Dv-~~ 139 (267)
T 3p8z_A 78 PEGRVIDLGCGRGGWSYYCAG--------L------KKV-TEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGK--DV-FY 139 (267)
T ss_dssp CCEEEEEESCTTSHHHHHHHT--------S------TTE-EEEEEECCCSTTSCCCCCCCCTTTTSEEEECSC--CG-GG
T ss_pred CCCEEEEcCCCCCcHHHHHHH--------h------cCC-CEEEEEecCCCCccCcchhhhcCcCceEEEecc--ce-ee
Confidence 345999999999999987653 1 022 37999999654311 12222221123456654 54 22
Q ss_pred cCCCCceeEEEecc
Q 037735 120 LFPKSSLHFVHSSY 133 (329)
Q Consensus 120 lfp~~s~dl~~Ss~ 133 (329)
+.| ..+|.++|-.
T Consensus 140 ~~~-~~~DtllcDI 152 (267)
T 3p8z_A 140 LPP-EKCDTLLCDI 152 (267)
T ss_dssp CCC-CCCSEEEECC
T ss_pred cCC-ccccEEEEec
Confidence 323 5577777643
No 288
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=85.94 E-value=1.1 Score=41.94 Aligned_cols=104 Identities=16% Similarity=0.229 Sum_probs=60.3
Q ss_pred CCCceEEEeeeC------CCCcccHHHHHHHHHHHHHHhhhcCCCCcc-ceEEecCCCcchHHhhhhcCCCCcceeeecc
Q 037735 40 VPNTFRIADFGC------STGPNTFIAVQNIIDSVELKFQHECPSAIE-FQVFFNDHSDNDFNTLFKSLPQSRSYYAAGV 112 (329)
Q Consensus 40 ~~~~~~IaDlGC------stG~nT~~l~~~ii~~~~~~~~~~~~~~pe-~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gv 112 (329)
.+...+|+|+|+ +.|. .+++ ++ .|+ ..|+.+|| ||+... ..+++.|
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS---~VLr--------~~------~p~g~~VVavDL--~~~~sd-------a~~~IqG- 159 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGT---AVLR--------QW------LPTGTLLVDSDL--NDFVSD-------ADSTLIG- 159 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH---HHHH--------HH------SCTTCEEEEEES--SCCBCS-------SSEEEES-
T ss_pred ecCCCEEEeCCCCCCCCCCCcH---HHHH--------Hh------CCCCcEEEEeeC--cccccC-------CCeEEEc-
Confidence 466799999995 6666 2222 22 343 47999999 565531 2356665
Q ss_pred ccccccccCCCCceeEEEeccceecccCCCCCCCCccceeecC-CcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEE
Q 037735 113 PGSFYSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRR-FVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAAL 191 (329)
Q Consensus 113 pgsFy~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~-~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~ 191 (329)
++ ..+.....+|+|+|=.| |.. .|++-... +..... +.-|.-..+.|+|||.+++
T Consensus 160 --D~-~~~~~~~k~DLVISDMA-------PNt---TG~~D~d~~Rs~~L~-----------ElALdfA~~~LkpGGsFvV 215 (344)
T 3r24_A 160 --DC-ATVHTANKWDLIISDMY-------DPR---TKHVTKENDSKEGFF-----------TYLCGFIKQKLALGGSIAV 215 (344)
T ss_dssp --CG-GGEEESSCEEEEEECCC-------CTT---SCSSCSCCCCCCTHH-----------HHHHHHHHHHEEEEEEEEE
T ss_pred --cc-cccccCCCCCEEEecCC-------CCc---CCccccchhHHHHHH-----------HHHHHHHHHhCcCCCEEEE
Confidence 45 44555688999998665 221 11100000 111111 1335555667999999999
Q ss_pred Eec
Q 037735 192 VMF 194 (329)
Q Consensus 192 ~~~ 194 (329)
=+|
T Consensus 216 KVF 218 (344)
T 3r24_A 216 KIT 218 (344)
T ss_dssp EEC
T ss_pred EEe
Confidence 876
No 289
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=85.19 E-value=3.4 Score=38.27 Aligned_cols=112 Identities=11% Similarity=-0.034 Sum_probs=68.2
Q ss_pred CCCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcC--------CCCcceeeec
Q 037735 40 VPNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSL--------PQSRSYYAAG 111 (329)
Q Consensus 40 ~~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l--------~~~~~~f~~g 111 (329)
.+++.+||=+|-|.|.....+++ + .+..+|...|+-..-....-+-+ .+.+--.+.+
T Consensus 81 ~p~pk~VLIiGgGdG~~~revlk---------~------~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~ 145 (294)
T 3o4f_A 81 HGHAKHVLIIGGGDGAMLREVTR---------H------KNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVID 145 (294)
T ss_dssp SSCCCEEEEESCTTSHHHHHHHT---------C------TTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEES
T ss_pred CCCCCeEEEECCCchHHHHHHHH---------c------CCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEec
Confidence 36789999999999998887763 1 22236777777543222111112 1223334566
Q ss_pred cccccccccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEE
Q 037735 112 VPGSFYSSLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAAL 191 (329)
Q Consensus 112 vpgsFy~~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~ 191 (329)
++..|-.+ .++++|+|+.=.+=.+- .+..=+. ..|++...+.|+|||+|+.
T Consensus 146 Dg~~~l~~--~~~~yDvIi~D~~dp~~--~~~~L~t-------------------------~eFy~~~~~~L~p~Gv~v~ 196 (294)
T 3o4f_A 146 DGVNFVNQ--TSQTFDVIISDCTDPIG--PGESLFT-------------------------SAFYEGCKRCLNPGGIFVA 196 (294)
T ss_dssp CTTTTTSC--SSCCEEEEEESCCCCCC--TTCCSSC-------------------------CHHHHHHHHTEEEEEEEEE
T ss_pred hHHHHHhh--ccccCCEEEEeCCCcCC--CchhhcC-------------------------HHHHHHHHHHhCCCCEEEE
Confidence 66666543 56789999975542210 0100011 1789999999999999998
Q ss_pred Eecc
Q 037735 192 VMFS 195 (329)
Q Consensus 192 ~~~g 195 (329)
..-.
T Consensus 197 q~~s 200 (294)
T 3o4f_A 197 QNGV 200 (294)
T ss_dssp EEEE
T ss_pred ecCC
Confidence 7643
No 290
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=84.59 E-value=0.43 Score=43.33 Aligned_cols=24 Identities=29% Similarity=0.317 Sum_probs=20.6
Q ss_pred CCceEEEeeeCCCCcccHHHHHHH
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNI 64 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~i 64 (329)
.+..+|||+|||+|.|++.++...
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~ 82 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAF 82 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHH
T ss_pred CCCCEEEEECCChHHHHHHHHHHH
Confidence 457999999999999999987643
No 291
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=84.42 E-value=1.2 Score=40.79 Aligned_cols=27 Identities=26% Similarity=0.410 Sum_probs=22.1
Q ss_pred HhhcHHHHHHHHHHHhccCceEEEEec
Q 037735 168 FNNDFQTFLNTRAQELVPGGLAALVMF 194 (329)
Q Consensus 168 ~~~D~~~FL~~ra~eL~pGG~l~~~~~ 194 (329)
+-.++..+++...+.|+|||.+++..-
T Consensus 72 ~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 72 FLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp HHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 445567788899999999999998874
No 292
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=81.53 E-value=1.1 Score=44.86 Aligned_cols=49 Identities=14% Similarity=0.106 Sum_probs=28.2
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcC--CCCccceEEecCCCcchH
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHEC--PSAIEFQVFFNDHSDNDF 94 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~--~~~pe~~v~~nDLp~ndf 94 (329)
...+|+|-.||||.+-....+.+.+ ...... ....+..++..|+-...+
T Consensus 217 ~~~~I~DPacGsGgfL~~a~~~l~~----~~~~~~~~~~~~~~~i~G~E~~~~~~ 267 (530)
T 3ufb_A 217 LGESVLDPACGTGGFLVEAFEHLER----QCKTVEDREVLQESSIFGGEAKSLPY 267 (530)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHT----TCCSHHHHHHHHTCCEEEECCSHHHH
T ss_pred CCCEEEeCCCCcchHHHHHHHHHHH----hccchhHHHHHhhhhhhhhhccHHHH
Confidence 3458999999999987776654421 110000 001135688888854443
No 293
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=79.29 E-value=5.8 Score=37.65 Aligned_cols=126 Identities=19% Similarity=0.125 Sum_probs=69.8
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC---C-----Ccce-eeecc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP---Q-----SRSY-YAAGV 112 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~---~-----~~~~-f~~gv 112 (329)
.-.+|+|+-||.|.=|..+++ . .+.-.|+.+|....-...+-+++. . ..++ .....
T Consensus 148 pg~~VLD~CAaPGGKT~~la~--------~-------~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D 212 (359)
T 4fzv_A 148 PGDIVLDLCAAPGGKTLALLQ--------T-------GCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWD 212 (359)
T ss_dssp TTEEEEESSCTTCHHHHHHHH--------T-------TCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCC
T ss_pred CCCEEEEecCCccHHHHHHHH--------h-------cCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCc
Confidence 347999999999999988764 1 122479999998766655544331 1 0122 22222
Q ss_pred ccccccccCCCCceeEEEeccceecccCCCCC-C--C--Cc-cceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccC
Q 037735 113 PGSFYSSLFPKSSLHFVHSSYTLHWLSKVPKV-D--G--VE-GSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPG 186 (329)
Q Consensus 113 pgsFy~~lfp~~s~dl~~Ss~alhWLs~~p~~-~--~--n~-g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pG 186 (329)
+..+ .. .+.+.+|.|. -++||+ + + .+ ..++....+..+.+.=.-| ..+|..-++-|+||
T Consensus 213 ~~~~-~~-~~~~~fD~VL--------lDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ-----~~iL~~a~~~lkpG 277 (359)
T 4fzv_A 213 GRKW-GE-LEGDTYDRVL--------VDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQ-----VQLLAAGLLATKPG 277 (359)
T ss_dssp GGGH-HH-HSTTCEEEEE--------EECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHH-----HHHHHHHHHTEEEE
T ss_pred hhhc-ch-hccccCCEEE--------ECCccCCCCCcccccChhhhhhCCHHHHHHHHHHH-----HHHHHHHHhcCCCC
Confidence 2211 11 2345677774 344544 1 0 00 0111112222222211222 26788889999999
Q ss_pred ceEEEEecccC
Q 037735 187 GLAALVMFSVP 197 (329)
Q Consensus 187 G~l~~~~~g~~ 197 (329)
|+||-+|....
T Consensus 278 G~LVYsTCSl~ 288 (359)
T 4fzv_A 278 GHVVYSTCSLS 288 (359)
T ss_dssp EEEEEEESCCC
T ss_pred cEEEEEeCCCc
Confidence 99999998744
No 294
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=78.16 E-value=0.63 Score=42.08 Aligned_cols=75 Identities=11% Similarity=0.055 Sum_probs=45.9
Q ss_pred ceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCc-------chHHhhhhcCC----CCcceeeec
Q 037735 43 TFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSD-------NDFNTLFKSLP----QSRSYYAAG 111 (329)
Q Consensus 43 ~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~-------ndfn~lf~~l~----~~~~~f~~g 111 (329)
..+|+|+|||+|..|+.+.. . ..+|+..|... ......-++.. ..+-.|+.|
T Consensus 84 ~~~VLDlgcG~G~~a~~lA~--------~---------g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~ 146 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVLAS--------L---------GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFG 146 (258)
T ss_dssp CCCEEETTCTTCHHHHHHHH--------T---------TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEES
T ss_pred cCeEEEeeCccCHHHHHHHH--------h---------CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEEC
Confidence 46899999999999998874 1 14799999977 44443322211 011234444
Q ss_pred ccccccccc--CCC--CceeEEEeccceec
Q 037735 112 VPGSFYSSL--FPK--SSLHFVHSSYTLHW 137 (329)
Q Consensus 112 vpgsFy~~l--fp~--~s~dl~~Ss~alhW 137 (329)
++.+-+ +|+ +++|+|++.-.+++
T Consensus 147 ---d~~~~l~~~~~~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 147 ---NAAEQMPALVKTQGKPDIVYLDPMYPE 173 (258)
T ss_dssp ---CHHHHHHHHHHHHCCCSEEEECCCC--
T ss_pred ---CHHHHHHhhhccCCCccEEEECCCCCC
Confidence 453322 344 78999998766655
No 295
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=76.81 E-value=4 Score=39.21 Aligned_cols=116 Identities=10% Similarity=-0.035 Sum_probs=65.9
Q ss_pred CCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCC-----------Ccceee
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQ-----------SRSYYA 109 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~-----------~~~~f~ 109 (329)
.++.+||=+|-|.|.....+++ + .+ -++...|+-..--.-.-+-+|. .+--.+
T Consensus 204 ~~pkrVLIIGgGdG~~~revlk---------h------~~-~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vi 267 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVK---------L------KP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVL 267 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHT---------T------CC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEE
T ss_pred CCCCeEEEECCCcHHHHHHHHh---------c------CC-ceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeee
Confidence 3467999999999987776653 1 22 3677777754332222222221 011234
Q ss_pred eccccccccccC-CCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCce
Q 037735 110 AGVPGSFYSSLF-PKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGL 188 (329)
Q Consensus 110 ~gvpgsFy~~lf-p~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~ 188 (329)
.+++..|-++.. ..+.+|+|+.=..=.+.+..|.. .....|. +.|++...+.|+|||+
T Consensus 268 i~Da~~fl~~~~~~~~~yDvIIvDl~D~~~s~~p~g--------------~a~~Lft-------~eFy~~~~~~L~p~GV 326 (381)
T 3c6k_A 268 IEDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEE--------------DSTWEFL-------RLILDLSMKVLKQDGK 326 (381)
T ss_dssp ESCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC------------------CHHHHH-------HHHHHHHHHTEEEEEE
T ss_pred hHHHHHHHHhhhhccCceeEEEECCCCCcccCcccC--------------cchHHHH-------HHHHHHHHHhcCCCCE
Confidence 455555554443 34579999875544443333311 0012233 3789999999999999
Q ss_pred EEEEe
Q 037735 189 AALVM 193 (329)
Q Consensus 189 l~~~~ 193 (329)
|+...
T Consensus 327 lv~Q~ 331 (381)
T 3c6k_A 327 YFTQG 331 (381)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 98764
No 296
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=73.88 E-value=5.4 Score=36.83 Aligned_cols=74 Identities=9% Similarity=-0.041 Sum_probs=46.4
Q ss_pred ceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCCCCcceeeecccccccc--cc
Q 037735 43 TFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLPQSRSYYAAGVPGSFYS--SL 120 (329)
Q Consensus 43 ~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~~~~~~f~~gvpgsFy~--~l 120 (329)
..+++|.+||.|.-|..+++ + ...|+.-|.-.......-+ +...+-.++. ++|-+ ..
T Consensus 23 gg~~VD~T~G~GGHS~~il~--------~---------~g~VigiD~Dp~Ai~~A~~-L~~~rv~lv~---~~f~~l~~~ 81 (285)
T 1wg8_A 23 GGVYVDATLGGAGHARGILE--------R---------GGRVIGLDQDPEAVARAKG-LHLPGLTVVQ---GNFRHLKRH 81 (285)
T ss_dssp TCEEEETTCTTSHHHHHHHH--------T---------TCEEEEEESCHHHHHHHHH-TCCTTEEEEE---SCGGGHHHH
T ss_pred CCEEEEeCCCCcHHHHHHHH--------C---------CCEEEEEeCCHHHHHHHHh-hccCCEEEEE---CCcchHHHH
Confidence 46899999999999999986 1 2478888987655554444 5332333444 35531 11
Q ss_pred C---CCCceeEEEe---ccceec
Q 037735 121 F---PKSSLHFVHS---SYTLHW 137 (329)
Q Consensus 121 f---p~~s~dl~~S---s~alhW 137 (329)
+ ..+++|.|+. .+++||
T Consensus 82 L~~~g~~~vDgIL~DLGvSS~Ql 104 (285)
T 1wg8_A 82 LAALGVERVDGILADLGVSSFHL 104 (285)
T ss_dssp HHHTTCSCEEEEEEECSCCHHHH
T ss_pred HHHcCCCCcCEEEeCCccccccc
Confidence 2 2356887773 466666
No 297
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=71.25 E-value=6.4 Score=35.79 Aligned_cols=42 Identities=10% Similarity=-0.154 Sum_probs=30.3
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKS 100 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~ 100 (329)
+.-+|+|++||||..+..+.. . ...++..|+....+...-+.
T Consensus 235 ~~~~vlD~f~GsGt~~~~a~~--------~---------g~~~~g~e~~~~~~~~a~~r 276 (297)
T 2zig_A 235 VGDVVLDPFAGTGTTLIAAAR--------W---------GRRALGVELVPRYAQLAKER 276 (297)
T ss_dssp TTCEEEETTCTTTHHHHHHHH--------T---------TCEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHH--------c---------CCeEEEEeCCHHHHHHHHHH
Confidence 346899999999998877753 1 14788999987666654443
No 298
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=71.14 E-value=2.2 Score=50.47 Aligned_cols=106 Identities=10% Similarity=0.129 Sum_probs=45.5
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhh---hhcCCCCcceeeecccccccc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTL---FKSLPQSRSYYAAGVPGSFYS 118 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~l---f~~l~~~~~~f~~gvpgsFy~ 118 (329)
...+|+|+|.|||..|..++..+ . . .+....+..+.|....-|... |+.+.-....+ .|.+ .
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l----~----~--~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~---d~~~--~ 1304 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALL----N----T--QPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQW---DPAN--P 1304 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHT----T----T--SSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECC---CSSC--C
T ss_pred CCceEEEECCCccHHHHHHHHhh----c----c--cCcccceEEEecCChHHHHHHHHHhhhcccccccc---cccc--c
Confidence 46899999999999988776533 1 0 011124677888775444221 11110000000 0000 0
Q ss_pred ccCCCCceeEEEeccceecccCCCCCCCCccceeecCCcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEe
Q 037735 119 SLFPKSSLHFVHSSYTLHWLSKVPKVDGVEGSIQTRRFVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVM 193 (329)
Q Consensus 119 ~lfp~~s~dl~~Ss~alhWLs~~p~~~~n~g~i~~~~~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~ 193 (329)
+-|...++|+++.+..||=..+ +...|+...+-|+|||.|++.-
T Consensus 1305 ~~~~~~~ydlvia~~vl~~t~~-------------------------------~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1305 APGSLGKADLLVCNCALATLGD-------------------------------PAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp CC-----CCEEEEECC---------------------------------------------------CCEEEEEE
T ss_pred ccCCCCceeEEEEccccccccc-------------------------------HHHHHHHHHHhcCCCcEEEEEe
Confidence 1224567999999988874322 2344778888999999998854
No 299
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=57.33 E-value=3.2 Score=37.56 Aligned_cols=32 Identities=13% Similarity=0.169 Sum_probs=26.0
Q ss_pred eEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcc
Q 037735 44 FRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDN 92 (329)
Q Consensus 44 ~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~n 92 (329)
.+|+|+|||+|..|+.+.+ + ..+|+..|....
T Consensus 90 ~~VLDl~~G~G~dal~lA~--------~---------g~~V~~vE~~~~ 121 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLAS--------V---------GCRVRMLERNPV 121 (258)
T ss_dssp CCEEETTCTTCHHHHHHHH--------H---------TCCEEEEECCHH
T ss_pred CEEEEcCCcCCHHHHHHHH--------c---------CCEEEEEECCHH
Confidence 6899999999999999975 1 136888898754
No 300
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=56.13 E-value=23 Score=30.71 Aligned_cols=13 Identities=8% Similarity=-0.123 Sum_probs=10.4
Q ss_pred HHHHhccCceEEE
Q 037735 179 RAQELVPGGLAAL 191 (329)
Q Consensus 179 ra~eL~pGG~l~~ 191 (329)
..+-|+|||++++
T Consensus 140 ~l~~l~~GG~Iv~ 152 (202)
T 3cvo_A 140 TAFSITRPVTLLF 152 (202)
T ss_dssp HHHHCSSCEEEEE
T ss_pred HHHhcCCCeEEEE
Confidence 4478999999966
No 301
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=54.30 E-value=7.7 Score=36.14 Aligned_cols=24 Identities=29% Similarity=0.481 Sum_probs=20.2
Q ss_pred CCceEEEeeeCCCCcccHHHHHHH
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNI 64 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~i 64 (329)
...++|+|+|=|||.|++..+...
T Consensus 95 ~~~~~IlE~GFGTGLNfl~t~~~~ 118 (308)
T 3vyw_A 95 RKVIRILDVGFGLGYNLAVALKHL 118 (308)
T ss_dssp CSEEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCcEEEEeCCCccHHHHHHHHHH
Confidence 457999999999999988877544
No 302
>3eb9_A 6-phosphogluconolactonase; catalytic mechanism, pentose phosphate pathway, hydrolase, zinc binding site; HET: FLC; 2.00A {Trypanosoma brucei} PDB: 2j0e_A* 3e7f_A*
Probab=41.98 E-value=78 Score=28.27 Aligned_cols=47 Identities=4% Similarity=-0.020 Sum_probs=27.5
Q ss_pred HHhHHHHHHHHHhHhhHHHHHhhcccCCCCCceEEEeeeCCCCcccHHHHHHHHHH
Q 037735 12 SNSAYQSIQVYILRYDPRTAVTDLGTNAVPNTFRIADFGCSTGPNTFIAVQNIIDS 67 (329)
Q Consensus 12 ~nS~~Q~~~~~~~~~~l~~ai~~i~~~~~~~~~~IaDlGCstG~nT~~l~~~ii~~ 67 (329)
....+-+.+++.+...+.+++.. .+. +-+|-++|..-..+.+.+++.
T Consensus 12 ~~~~l~~~~A~~i~~~i~~~i~~------~~~---~~l~LsgGstP~~ly~~L~~~ 58 (266)
T 3eb9_A 12 TPQELSAAGCRKIVEIIEASGSQ------QWP---LSIALAGGSTPKMTYARLHDE 58 (266)
T ss_dssp SHHHHHHHHHHHHHHHHHHHCGG------GCS---EEEEECCSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHh------CCC---EEEEEcCCCCHHHHHHHHHHH
Confidence 33444455566666666665432 222 457889888767777766643
No 303
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=41.60 E-value=36 Score=32.10 Aligned_cols=43 Identities=16% Similarity=0.243 Sum_probs=30.3
Q ss_pred ceEEEeeeCCCCcccHHHHHH--------------HHHHHHHHhhhcCCCCccceEEecCCC
Q 037735 43 TFRIADFGCSTGPNTFIAVQN--------------IIDSVELKFQHECPSAIEFQVFFNDHS 90 (329)
Q Consensus 43 ~~~IaDlGCstG~nT~~l~~~--------------ii~~~~~~~~~~~~~~pe~~v~~nDLp 90 (329)
..+|+|+|.|.|.+|..++.. ++..|++.+ . .+.++++..|--
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~----~~~l~ii~~D~l 115 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E----GSPLQILKRDPY 115 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T----TSSCEEECSCTT
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c----CCCEEEEECCcc
Confidence 478999999999999999863 334444443 1 234677777764
No 304
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=39.68 E-value=14 Score=37.72 Aligned_cols=24 Identities=21% Similarity=0.274 Sum_probs=21.1
Q ss_pred CCceEEEeeeCCCCcccHHHHHHH
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNI 64 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~i 64 (329)
.++++|+|+|.|+|.|.+..++..
T Consensus 57 ~~~~~i~e~gfG~G~n~l~~~~~~ 80 (689)
T 3pvc_A 57 QQSCIFAETGFGTGLNFLTLWRDF 80 (689)
T ss_dssp SSEEEEEEECCTTSHHHHHHHHHH
T ss_pred CCceEEEEecCchHHHHHHHHHHH
Confidence 467999999999999999998753
No 305
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=33.60 E-value=20 Score=32.96 Aligned_cols=26 Identities=35% Similarity=0.680 Sum_probs=23.0
Q ss_pred hcHHHHHHHHHHHhccCceEEEEecc
Q 037735 170 NDFQTFLNTRAQELVPGGLAALVMFS 195 (329)
Q Consensus 170 ~D~~~FL~~ra~eL~pGG~l~~~~~g 195 (329)
..|..+|..-..-|+|||+|++.+|-
T Consensus 210 ~~L~~~L~~a~~~L~~gGrl~visfH 235 (285)
T 1wg8_A 210 NALKEFLEQAAEVLAPGGRLVVIAFH 235 (285)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEecC
Confidence 45889999999999999999998874
No 306
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=32.45 E-value=31 Score=30.47 Aligned_cols=36 Identities=11% Similarity=-0.002 Sum_probs=25.3
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchH
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDF 94 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndf 94 (329)
+--.|+|..||+|..+...+. . ...++..|+...-+
T Consensus 212 ~~~~vlD~f~GsGtt~~~a~~--------~---------gr~~ig~e~~~~~~ 247 (260)
T 1g60_A 212 PNDLVLDCFMGSGTTAIVAKK--------L---------GRNFIGCDMNAEYV 247 (260)
T ss_dssp TTCEEEESSCTTCHHHHHHHH--------T---------TCEEEEEESCHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHH--------c---------CCeEEEEeCCHHHH
Confidence 346899999999997777653 1 14678888865433
No 307
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=31.75 E-value=21 Score=36.06 Aligned_cols=24 Identities=29% Similarity=0.317 Sum_probs=21.2
Q ss_pred CCceEEEeeeCCCCcccHHHHHHH
Q 037735 41 PNTFRIADFGCSTGPNTFIAVQNI 64 (329)
Q Consensus 41 ~~~~~IaDlGCstG~nT~~l~~~i 64 (329)
.+.++|+|+|-|||.|.+..++..
T Consensus 65 ~~~~~i~e~gfG~Gln~l~~~~~~ 88 (676)
T 3ps9_A 65 HPLFVVAESGFGTGLNFLTLWQAF 88 (676)
T ss_dssp SSEEEEEEECCTTSHHHHHHHHHH
T ss_pred CCceEEEEeCCchHHHHHHHHHHH
Confidence 467999999999999999998754
No 308
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=31.72 E-value=22 Score=33.61 Aligned_cols=26 Identities=23% Similarity=0.534 Sum_probs=22.9
Q ss_pred hcHHHHHHHHHHHhccCceEEEEecc
Q 037735 170 NDFQTFLNTRAQELVPGGLAALVMFS 195 (329)
Q Consensus 170 ~D~~~FL~~ra~eL~pGG~l~~~~~g 195 (329)
..|..+|..--+-|+|||+|++.+|=
T Consensus 251 ~~L~~~L~~a~~~L~~gGRl~VISFH 276 (347)
T 3tka_A 251 EEIEQALKSSLNVLAPGGRLSIISFH 276 (347)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEESS
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEecC
Confidence 45788999999999999999999874
No 309
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=30.53 E-value=3.2e+02 Score=25.04 Aligned_cols=36 Identities=11% Similarity=0.231 Sum_probs=28.1
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcc
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDN 92 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~n 92 (329)
+...|+.||||.......+.. . .+.+.+|=-|+|..
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~--------~-------~~~~~~~EvD~P~v 132 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQ--------M-------FPHLAYVDIDYNES 132 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHH--------H-------CTTEEEEEEECHHH
T ss_pred CCcEEEEeCCCCccHHHHhcC--------c-------CCCCEEEECCCHHH
Confidence 457899999999999888864 1 23578898999853
No 310
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=28.40 E-value=39 Score=31.91 Aligned_cols=58 Identities=14% Similarity=0.063 Sum_probs=39.3
Q ss_pred hHHHHHhhcccCCCCCceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC
Q 037735 27 DPRTAVTDLGTNAVPNTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP 102 (329)
Q Consensus 27 ~l~~ai~~i~~~~~~~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~ 102 (329)
++++.+..+.. .+..+++|..||.|.-|..+++.+ .|...|+.-|.-....... +.|.
T Consensus 45 Ll~Evl~~L~i---~pggiyVD~TlG~GGHS~~iL~~l--------------g~~GrVig~D~Dp~Al~~A-~rL~ 102 (347)
T 3tka_A 45 LLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQL--------------GEEGRLLAIDRDPQAIAVA-KTID 102 (347)
T ss_dssp TTHHHHHHTCC---CTTCEEEESCCTTSHHHHHHHTTC--------------CTTCEEEEEESCHHHHHHH-TTCC
T ss_pred cHHHHHHhhCC---CCCCEEEEeCcCCCHHHHHHHHhC--------------CCCCEEEEEECCHHHHHHH-Hhhc
Confidence 55666665521 234678999999999999998522 3556899999876555443 3443
No 311
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=28.04 E-value=29 Score=30.04 Aligned_cols=37 Identities=14% Similarity=0.110 Sum_probs=30.3
Q ss_pred hHHHHHHHHHHHHhcCCcCCCc----ccCCCHHHHHHHHHh
Q 037735 210 FYNTFGSCLVELTKMGILSKEK----MYNPTPKELEGIIQR 246 (329)
Q Consensus 210 ~~~~l~~a~~~l~~eG~i~~~~----~y~ps~eE~~~~i~~ 246 (329)
+|+-+-+-++.|+.+|.|+++. .+..+++|+.+.|++
T Consensus 158 fw~~l~~~l~~~~~~Gfi~~~~~~~i~~~d~~~e~~~~l~~ 198 (199)
T 3qua_A 158 HYDGLLTWLRGLVPTGYVSQRAMDSLVVVDNVEAALEACAP 198 (199)
T ss_dssp TTHHHHHHHHHTTTTTSSCHHHHHTSEEESSHHHHHHHHSC
T ss_pred cchHHHHHHHHHHHCCCCCHHHCCeEEEeCCHHHHHHHHhc
Confidence 6777777778999999998886 566899999888764
No 312
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=28.04 E-value=19 Score=32.98 Aligned_cols=26 Identities=27% Similarity=0.589 Sum_probs=22.8
Q ss_pred hcHHHHHHHHHHHhccCceEEEEecc
Q 037735 170 NDFQTFLNTRAQELVPGGLAALVMFS 195 (329)
Q Consensus 170 ~D~~~FL~~ra~eL~pGG~l~~~~~g 195 (329)
..|..+|..-...|+|||+|++.+|=
T Consensus 222 ~~l~~~l~~~~~~l~~ggr~~visfh 247 (301)
T 1m6y_A 222 ENLKEFLKKAEDLLNPGGRIVVISFH 247 (301)
T ss_dssp HHHHHHHHHGGGGEEEEEEEEEEESS
T ss_pred HHHHHHHHHHHHhhCCCCEEEEEecC
Confidence 56889999999999999999998864
No 313
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=27.90 E-value=39 Score=29.02 Aligned_cols=36 Identities=14% Similarity=0.217 Sum_probs=29.4
Q ss_pred hHHHHHHHHHHHHhcCCcCCCc----ccCCCHHHHHHHHH
Q 037735 210 FYNTFGSCLVELTKMGILSKEK----MYNPTPKELEGIIQ 245 (329)
Q Consensus 210 ~~~~l~~a~~~l~~eG~i~~~~----~y~ps~eE~~~~i~ 245 (329)
+|+-+-+-++.|+.+|.|+++. .+..+++|+.+.|+
T Consensus 149 fw~~l~~~l~~~~~~Gfi~~~~~~~i~~~d~~ee~~~~l~ 188 (189)
T 3sbx_A 149 HFDGLRAWLSELADTGYVSRTAMERLIVVDNLDDALQACA 188 (189)
T ss_dssp TTHHHHHHHHHHHHTTSSCHHHHHHEEEESSHHHHHHHHC
T ss_pred cchHHHHHHHHHHHCCCCCHHHcCeEEEeCCHHHHHHHhc
Confidence 6777777778999999998886 66689999888765
No 314
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=26.49 E-value=3.6e+02 Score=24.36 Aligned_cols=71 Identities=8% Similarity=0.093 Sum_probs=40.6
Q ss_pred HHHHHHHHHHhccCceEEEEecccCCCCcccCCcccchHHHHHHHH-HHHHhcC--C-cCCCc-ccCCC-HHHHHHHHHh
Q 037735 173 QTFLNTRAQELVPGGLAALVMFSVPDGIPLVNNAAGSFYNTFGSCL-VELTKMG--I-LSKEK-MYNPT-PKELEGIIQR 246 (329)
Q Consensus 173 ~~FL~~ra~eL~pGG~l~~~~~g~~~~~~~~~~~~~~~~~~l~~a~-~~l~~eG--~-i~~~~-~y~ps-~eE~~~~i~~ 246 (329)
..+|+..+.-+.||+.|++..+..+. +. + ....+... ..+...| + ++-.. .++++ .+|+.+.+..
T Consensus 198 ~~ll~~l~~~~~~gs~l~~d~~~~~~--~~-----~--~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~f~~ 268 (310)
T 2uyo_A 198 DGLFTEIGGLSAVGSRIAVETSPLHG--DE-----W--REQMQLRFRRVSDALGFEQAVDVQELIYHDENRAVVADWLNR 268 (310)
T ss_dssp HHHHHHHHHTCCTTCEEEEECCCTTC--SH-----H--HHHHHHHHHHHHC-----------CCTTCCTTCCCHHHHHTT
T ss_pred HHHHHHHHHhCCCCeEEEEEecCCCC--cc-----h--hHHHHHHHHHHHHHcCCcCCCCccccccCCCChHHHHHHHHH
Confidence 46777777778899999999876543 10 0 01122222 2222223 1 11012 56678 9999999988
Q ss_pred CCceEEe
Q 037735 247 NGNFTIE 253 (329)
Q Consensus 247 ~g~f~i~ 253 (329)
.| |+..
T Consensus 269 ~G-~~~~ 274 (310)
T 2uyo_A 269 HG-WRAT 274 (310)
T ss_dssp TT-EEEE
T ss_pred Cc-Cccc
Confidence 84 9887
No 315
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=23.61 E-value=57 Score=27.77 Aligned_cols=37 Identities=14% Similarity=0.225 Sum_probs=31.1
Q ss_pred hHHHHHHHHHHHHhcCCcCCCc----ccCCCHHHHHHHHHh
Q 037735 210 FYNTFGSCLVELTKMGILSKEK----MYNPTPKELEGIIQR 246 (329)
Q Consensus 210 ~~~~l~~a~~~l~~eG~i~~~~----~y~ps~eE~~~~i~~ 246 (329)
+|+-+-+-++.|+.+|.|+++. .+..+++|+.+.+++
T Consensus 138 ~~~~l~~~l~~~~~~Gfi~~~~~~~~~~~~~~~e~~~~l~~ 178 (191)
T 1t35_A 138 YFEPMMKMVKYSIQEGFSNESHLKLIHSSSRPDELIEQMQN 178 (191)
T ss_dssp TTHHHHHHHHHHHHTTSSCTTHHHHEEEESSHHHHHHHHHT
T ss_pred ccchHHHHHHHHHHCCCCCHHHcCeEEEeCCHHHHHHHHHH
Confidence 6777777778999999999887 666899999998875
No 316
>4d8b_A Streptopain; papain fold, cysteine protease, secreted, hydrolase; 1.06A {Streptococcus pyogenes} PDB: 4d8e_A* 4d8i_A* 2uzj_A* 2jtc_A
Probab=23.51 E-value=1e+02 Score=27.82 Aligned_cols=78 Identities=23% Similarity=0.310 Sum_probs=48.6
Q ss_pred hHHHHHHHHHhHhhHHHHHhhcccCCCCCceEEEeeeC-CCCcccHHHHHHHHHHHHHHhhhcCCCCccce-EEecCCCc
Q 037735 14 SAYQSIQVYILRYDPRTAVTDLGTNAVPNTFRIADFGC-STGPNTFIAVQNIIDSVELKFQHECPSAIEFQ-VFFNDHSD 91 (329)
Q Consensus 14 S~~Q~~~~~~~~~~l~~ai~~i~~~~~~~~~~IaDlGC-stG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~-v~~nDLp~ 91 (329)
+..|+.++..|+..+-.++. .+||| |||.++. .+.++|++.+.-. ..++ +.-+|...
T Consensus 109 t~~~~~aVA~Lm~~vG~av~-------------M~Y~~~gSGa~~~----~~~~aL~~~FgY~----~~~~~~~r~~y~~ 167 (261)
T 4d8b_A 109 SNVQKMAISELMADVGISVD-------------MDYGPSSGSAGSS----RVQRALKENFGYN----QSVHQINRSDFSK 167 (261)
T ss_dssp CHHHHHHHHHHHHHHHHHTT-------------CBCSSSCBCCCHH----HHHHHHHHTTCBC----TTCEEEEGGGSCH
T ss_pred CHHHHHHHHHHHHHHHHHhC-------------CEEcCCCCcccHH----HHHHHHHHHcCCC----cccceeecccCCH
Confidence 56788888888877776642 34666 4677664 4456666654321 1123 33456777
Q ss_pred chHH-hhhhcCCCCcceeeecc
Q 037735 92 NDFN-TLFKSLPQSRSYYAAGV 112 (329)
Q Consensus 92 ndfn-~lf~~l~~~~~~f~~gv 112 (329)
++|. .+.++|...++++.+|.
T Consensus 168 ~ew~~~I~~eL~~grPV~~~G~ 189 (261)
T 4d8b_A 168 QDWEAQIDKELSQNQPVYYQGV 189 (261)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEee
Confidence 7774 46777877778888874
No 317
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=22.81 E-value=1.2e+02 Score=27.79 Aligned_cols=45 Identities=11% Similarity=0.025 Sum_probs=30.2
Q ss_pred CceEEEeeeCCCCcccHHHHHHHHHHHHHHhhhcCCCCccceEEecCCCcchHHhhhhcCC
Q 037735 42 NTFRIADFGCSTGPNTFIAVQNIIDSVELKFQHECPSAIEFQVFFNDHSDNDFNTLFKSLP 102 (329)
Q Consensus 42 ~~~~IaDlGCstG~nT~~l~~~ii~~~~~~~~~~~~~~pe~~v~~nDLp~ndfn~lf~~l~ 102 (329)
...+++||-||.|..++.+.+ . -. -.++++|.-..-..++-.+.+
T Consensus 10 ~~~~~~dLFaG~Gg~~~g~~~--------a-------G~-~~v~~~e~d~~a~~t~~~N~~ 54 (327)
T 2c7p_A 10 TGLRFIDLFAGLGGFRLALES--------C-------GA-ECVYSNEWDKYAQEVYEMNFG 54 (327)
T ss_dssp TTCEEEEETCTTTHHHHHHHH--------T-------TC-EEEEEECCCHHHHHHHHHHHS
T ss_pred CCCcEEEECCCcCHHHHHHHH--------C-------CC-eEEEEEeCCHHHHHHHHHHcC
Confidence 458999999999999998864 1 11 147778876544444444443
No 318
>2v1n_A KIN17, protein KIN homolog; nuclear protein, winged helix motif; NMR {Homo sapiens}
Probab=20.79 E-value=46 Score=26.22 Aligned_cols=67 Identities=16% Similarity=0.208 Sum_probs=44.5
Q ss_pred CcHHHHHHHHHHHhhcHHHHHHHHHHHhccCceEEEEecccCCCCcccCCcccchHHHHHHHHHHHHhcCCcCCCc----
Q 037735 156 FVNEVMEAYAAQFNNDFQTFLNTRAQELVPGGLAALVMFSVPDGIPLVNNAAGSFYNTFGSCLVELTKMGILSKEK---- 231 (329)
Q Consensus 156 ~~~~~~~ay~~q~~~D~~~FL~~ra~eL~pGG~l~~~~~g~~~~~~~~~~~~~~~~~~l~~a~~~l~~eG~i~~~~---- 231 (329)
.|..+...|.+||++||-..|+.|..+=+. ......++.+.+ ..
T Consensus 11 n~~k~i~~fS~eF~~~Fl~lLr~~~g~krV---------------------------~aN~vYnEyI~d-----k~HiHM 58 (111)
T 2v1n_A 11 NPQQFMDYFSEEFRNDFLELLRRRFGTKRV---------------------------HNNIVYNEYISH-----REHIHM 58 (111)
T ss_dssp CGGGCHHHHHHHHHHHHHHHHHHHTSSCEE---------------------------EHHHHHHHHTTS-----SCCCCG
T ss_pred CHhhHHHHHHHHHHHHHHHHHHHhcCCcEe---------------------------ehhHHHHHHhcc-----cccccc
Confidence 445678999999999999999987532111 111222444322 22
Q ss_pred --ccCCCHHHHHHHHHhCCceEEeE
Q 037735 232 --MYNPTPKELEGIIQRNGNFTIER 254 (329)
Q Consensus 232 --~y~ps~eE~~~~i~~~g~f~i~~ 254 (329)
.-..|+-|+...|..+|-.+++.
T Consensus 59 NaT~W~tLT~Fvk~Lgr~G~c~V~e 83 (111)
T 2v1n_A 59 NATQWETLTDFTKWLGREGLCKVDE 83 (111)
T ss_dssp GGSSCSSHHHHHHHHTTTTSEEEEE
T ss_pred cccccccHHHHHHHhccCCeEEEec
Confidence 34469999999999998666654
Done!