BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037737
(165 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 94.4 bits (233), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 76/146 (52%), Gaps = 2/146 (1%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ + M ELA +P + + QEE+ V+ NK+ D V QM YL V+ E+LRL P +
Sbjct: 292 LSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIA-MR 350
Query: 74 FPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFD 133
R V + G IP +V + +A+ RDPK W E FLPERF D N +
Sbjct: 351 LERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD-NIDPYI 409
Query: 134 FIPFGTGRRFCPGMLFGKVAAEFARV 159
+ PFG+G R C GM F + + A +
Sbjct: 410 YTPFGSGPRNCIGMRFALMNMKLALI 435
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 94.4 bits (233), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 76/146 (52%), Gaps = 2/146 (1%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ + M ELA +P + + QEE+ V+ NK+ D V QM YL V+ E+LRL P +
Sbjct: 293 LSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIA-MR 351
Query: 74 FPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFD 133
R V + G IP +V + +A+ RDPK W E FLPERF D N +
Sbjct: 352 LERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD-NIDPYI 410
Query: 134 FIPFGTGRRFCPGMLFGKVAAEFARV 159
+ PFG+G R C GM F + + A +
Sbjct: 411 YTPFGSGPRNCIGMRFALMNMKLALI 436
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 94.4 bits (233), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 76/146 (52%), Gaps = 2/146 (1%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ + M ELA +P + + QEE+ V+ NK+ D V QM YL V+ E+LRL P +
Sbjct: 294 LSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIA-MR 352
Query: 74 FPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFD 133
R V + G IP +V + +A+ RDPK W E FLPERF D N +
Sbjct: 353 LERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD-NIDPYI 411
Query: 134 FIPFGTGRRFCPGMLFGKVAAEFARV 159
+ PFG+G R C GM F + + A +
Sbjct: 412 YTPFGSGPRNCIGMRFALMNMKLALI 437
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 83.2 bits (204), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 76/152 (50%), Gaps = 1/152 (0%)
Query: 1 DMFXXXXXXXXXXVEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVM 60
D+F V+W +A L NP++ K EE+ + V + + D +++ L+ +
Sbjct: 280 DIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATI 339
Query: 61 KESLRLHPAGTISFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERF 120
+E LRL P + P + + ++G + + T V +N+WA+ + K W + + F+PERF
Sbjct: 340 REVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERF 399
Query: 121 IN-STIDFNGQYFDFIPFGTGRRFCPGMLFGK 151
+N + ++PFG G R C G + +
Sbjct: 400 LNPAGTQLISPSVSYLPFGAGPRSCIGEILAR 431
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 2/153 (1%)
Query: 1 DMFXXXXXXXXXXVEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVM 60
D+F + W++ L P++ + Q+E+ V+ + + D Q+ YL+ +
Sbjct: 289 DIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFI 348
Query: 61 KESLRLHPAGTISFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERF 120
E+ R + P T+ L G+ IP K V++N W + DP++W+ F PERF
Sbjct: 349 LETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERF 408
Query: 121 INSTIDFNGQYFD--FIPFGTGRRFCPGMLFGK 151
+ + + + FG G+R C G + K
Sbjct: 409 LTADGTAINKPLSEKMMLFGMGKRRCIGEVLAK 441
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 73.6 bits (179), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 1/147 (0%)
Query: 1 DMFXXXXXXXXXXVEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVM 60
D+F + W++ L NP++ + QEE+ V+ + D + Y++ +
Sbjct: 286 DLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFI 345
Query: 61 KESLRLHPAGTISFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERF 120
E+ R + P T+ +L G+ IP V++N W I D K+W FLPERF
Sbjct: 346 LETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERF 405
Query: 121 INSTIDFNGQYFD-FIPFGTGRRFCPG 146
+ + + I FG G+R C G
Sbjct: 406 LTPDGAIDKVLSEKVIIFGMGKRKCIG 432
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 1/133 (0%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ WA+ +A P + Q+E+ ++ + DD +M Y + V+ E LR +
Sbjct: 293 LRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLG 352
Query: 74 FPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFD 133
TS + GY IP T V N++++ D K W EVF PERF++S+ F +
Sbjct: 353 IFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKE-A 411
Query: 134 FIPFGTGRRFCPG 146
+PF GRR C G
Sbjct: 412 LVPFSLGRRHCLG 424
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 1/133 (0%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ WA+ +A P + Q+E+ ++ + DD +M Y + V+ E LR +
Sbjct: 293 LRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLG 352
Query: 74 FPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFD 133
TS + GY IP T V N++++ D K W EVF PERF++S+ F +
Sbjct: 353 IFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKE-A 411
Query: 134 FIPFGTGRRFCPG 146
+PF GRR C G
Sbjct: 412 LVPFSLGRRHCLG 424
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 71/143 (49%), Gaps = 5/143 (3%)
Query: 16 WAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTISFP 75
W + L++NP+ + +EV+ V+ + + +D+ M YLK +KES+RL P ++ F
Sbjct: 305 WILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAEDLRNMPYLKACLKESMRLTP--SVPFT 362
Query: 76 RETSTRVN-LGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDF 134
T + LG Y +P T++ +N + ++ + F PER++ N F
Sbjct: 363 TRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKEKKINP--FAH 420
Query: 135 IPFGTGRRFCPGMLFGKVAAEFA 157
+PFG G+R C G ++ A
Sbjct: 421 LPFGIGKRMCIGRRLAELQLHLA 443
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 70.1 bits (170), Expect = 6e-13, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 8/149 (5%)
Query: 1 DMFXXXXXXXXXXVEWAMAELAKNPKLLKNAQEEVRRVV---KNKSSINMDDVDQMHYLK 57
D+F + WA+A L +P++ + QEE+ R + + S + D ++ L
Sbjct: 286 DLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVTYKDRARLPLLN 345
Query: 58 CVMKESLRLHPAGTISFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLP 117
+ E LRL P ++ P T+ ++ GYDIP +V N+ D VW++ F P
Sbjct: 346 ATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRP 405
Query: 118 ERFINSTIDFNGQYFDFIPFGTGRRFCPG 146
+RF+ G + FG G R C G
Sbjct: 406 DRFLEP-----GANPSALAFGCGARVCLG 429
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 1/146 (0%)
Query: 1 DMFXXXXXXXXXXVEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVM 60
D+F + +A+ L K+P++ QEE+ RV+ S M D M Y V+
Sbjct: 276 DLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVV 335
Query: 61 KESLRLHPAGTISFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERF 120
E R S P + + Y IP T + +++ ++ D K + E+F P F
Sbjct: 336 HEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHF 395
Query: 121 INSTIDFNGQYFDFIPFGTGRRFCPG 146
++ +F + F+PF G+R C G
Sbjct: 396 LDEGGNFKKSKY-FMPFSAGKRICVG 420
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 1/146 (0%)
Query: 1 DMFXXXXXXXXXXVEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVM 60
D+F + +A+ L K+P++ QEE+ RV+ S M D M Y V+
Sbjct: 274 DLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVV 333
Query: 61 KESLRLHPAGTISFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERF 120
E R S P + + Y IP T + +++ ++ D K + E+F P F
Sbjct: 334 HEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHF 393
Query: 121 INSTIDFNGQYFDFIPFGTGRRFCPG 146
++ +F + F+PF G+R C G
Sbjct: 394 LDEGGNFKKSKY-FMPFSAGKRICVG 418
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 1/153 (0%)
Query: 1 DMFXXXXXXXXXXVEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVM 60
D+F ++W + + P + Q E+ +VV M D + Y+ +
Sbjct: 286 DIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFL 345
Query: 61 KESLRLHPAGTISFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERF 120
E++R ++ P T+ ++ GY IP T+V++N W++ DP W E F P RF
Sbjct: 346 YEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARF 405
Query: 121 INSTIDFNGQYFD-FIPFGTGRRFCPGMLFGKV 152
++ N + F G+R C G K+
Sbjct: 406 LDKDGLINKDLTSRVMIFSVGKRRCIGEELSKM 438
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 71/127 (55%), Gaps = 3/127 (2%)
Query: 20 ELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRETS 79
ELA+NP + + ++E + S ++ L+ +KE+LRL+P G + R S
Sbjct: 303 ELARNPDVQQILRQESLAAAASISEHPQKATTELPLLRAALKETLRLYPVG-LFLERVVS 361
Query: 80 TRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDFIPFGT 139
+ + L Y IPA T+V + ++++ R+ ++ R E + P+R+++ I +G+ F +PFG
Sbjct: 362 SDLVLQNYHIPAGTLVQVFLYSLGRNAALFPRPERYNPQRWLD--IRGSGRNFHHVPFGF 419
Query: 140 GRRFCPG 146
G R C G
Sbjct: 420 GMRQCLG 426
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 3/136 (2%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ W + LA +P+ ++EV V + + +DV ++ + V+ E++RL PA +
Sbjct: 283 IMWLLQALADHPEHADRIRDEVEAVTGGRP-VAFEDVRKLRHTGNVIVEAMRLRPAVWV- 340
Query: 74 FPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFD 133
R LGGY IPA + + +AIQRDPK +D F P+R++ N +
Sbjct: 341 LTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERA-ANVPKYA 399
Query: 134 FIPFGTGRRFCPGMLF 149
PF G+R CP F
Sbjct: 400 MKPFSAGKRKCPSDHF 415
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 7/149 (4%)
Query: 1 DMFXXXXXXXXXXVEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVM 60
D+F + W + + +P + + Q+E+ V+ M D M Y V+
Sbjct: 279 DLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVI 338
Query: 61 KESLRLHPAGTISFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERF 120
E R + TS + + G+ IP T + N+ ++ +D VW++ F PE F
Sbjct: 339 HEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHF 398
Query: 121 INSTIDFNGQYFD---FIPFGTGRRFCPG 146
+D G + F+PF GRR C G
Sbjct: 399 ----LDAQGHFVKPEAFLPFSAGRRACLG 423
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 7/149 (4%)
Query: 1 DMFXXXXXXXXXXVEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVM 60
D+F + W + + +P + + Q+E+ V+ M D M Y V+
Sbjct: 279 DLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVI 338
Query: 61 KESLRLHPAGTISFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERF 120
E R + TS + + G+ IP T + N+ ++ +D VW++ F PE F
Sbjct: 339 HEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHF 398
Query: 121 INSTIDFNGQYFD---FIPFGTGRRFCPG 146
+D G + F+PF GRR C G
Sbjct: 399 ----LDAQGHFVKPEAFLPFSAGRRACLG 423
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 1/146 (0%)
Query: 1 DMFXXXXXXXXXXVEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVM 60
D+ + +A+ L K+P++ QEE+ RVV S M D M Y V+
Sbjct: 276 DLLGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRNRSPCMQDRGHMPYTDAVV 335
Query: 61 KESLRLHPAGTISFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERF 120
E R S P + V Y IP T + ++ ++ D K + E+F P F
Sbjct: 336 HEVQRYIDLIPTSLPHAVTCDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHF 395
Query: 121 INSTIDFNGQYFDFIPFGTGRRFCPG 146
++ +F + F+PF G+R C G
Sbjct: 396 LDEGGNFKKSNY-FMPFSAGKRICVG 420
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 72/137 (52%), Gaps = 11/137 (8%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQM----HYLKCVMKESLRLHPA 69
++W + E+A++ N QE +R V N D+ +M LK +KE+LRLHP
Sbjct: 296 LQWHLYEMARS----LNVQEMLREEVLNARRQAEGDISKMLQMVPLLKASIKETLRLHPI 351
Query: 70 GTISFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNG 129
+++ R + + L Y IPAKT+V + ++A+ RDP + + F P R+++ D
Sbjct: 352 -SVTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPAFFSSPDKFDPTRWLSKDKDL-- 408
Query: 130 QYFDFIPFGTGRRFCPG 146
+F + FG G R C G
Sbjct: 409 IHFRNLGFGWGVRQCVG 425
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 1/146 (0%)
Query: 1 DMFXXXXXXXXXXVEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVM 60
D+F + +++ L K+P++ QEE+ RV+ S M D +M Y V+
Sbjct: 272 DLFGAGTETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRHRSPCMQDRSRMPYTDAVI 331
Query: 61 KESLRLHPAGTISFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERF 120
E R + P + V Y IP T + ++ ++ D K + +VF P F
Sbjct: 332 HEIQRFIDLLPTNLPHAVTRDVRFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHF 391
Query: 121 INSTIDFNGQYFDFIPFGTGRRFCPG 146
++ + +F + F+PF G+R C G
Sbjct: 392 LDESGNFKKSDY-FMPFSAGKRMCVG 416
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 9/140 (6%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L KNP +L+ A EE RV+ + + V Q+ Y+ V+ E+LRL P +
Sbjct: 274 LSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAP-A 331
Query: 74 FPRETSTRVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQ 130
F LGG Y + + + + + RD +W D E F PERF N S I +
Sbjct: 332 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA- 390
Query: 131 YFDFIPFGTGRRFCPGMLFG 150
F PFG G+R CPG F
Sbjct: 391 ---FKPFGNGQRACPGQQFA 407
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 75/134 (55%), Gaps = 5/134 (3%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQM-HYLKCVMKESLRLHPAGTI 72
++W + E+A+N K+ + EV ++++ +M + Q+ LK +KE+LRLHP ++
Sbjct: 295 LQWHLYEMARNLKVQDMLRAEVL-AARHQAQGDMATMLQLVPLLKASIKETLRLHPI-SV 352
Query: 73 SFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYF 132
+ R + L Y IPAKT+V + ++A+ R+P + E F P R+++ D N YF
Sbjct: 353 TLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSK--DKNITYF 410
Query: 133 DFIPFGTGRRFCPG 146
+ FG G R C G
Sbjct: 411 RNLGFGWGVRQCLG 424
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 75/134 (55%), Gaps = 5/134 (3%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQM-HYLKCVMKESLRLHPAGTI 72
++W + E+A+N K+ + EV ++++ +M + Q+ LK +KE+LRLHP ++
Sbjct: 292 LQWHLYEMARNLKVQDMLRAEVL-AARHQAQGDMATMLQLVPLLKASIKETLRLHPI-SV 349
Query: 73 SFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYF 132
+ R + L Y IPAKT+V + ++A+ R+P + E F P R+++ D N YF
Sbjct: 350 TLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSK--DKNITYF 407
Query: 133 DFIPFGTGRRFCPG 146
+ FG G R C G
Sbjct: 408 RNLGFGWGVRQCLG 421
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 16 WAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTISFP 75
+ + EL++ P+++ Q EV V+ +K ++ +D+ ++ YL V+KESLRL+P +F
Sbjct: 265 FTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVLKESLRLYPPAWGTF- 323
Query: 76 RETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDFI 135
R + G +P T + + + + R ++ F P+RF YF
Sbjct: 324 RLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAPKPRFTYF--- 380
Query: 136 PFGTGRRFCPGMLFGKV 152
PF G R C G F ++
Sbjct: 381 PFSLGHRSCIGQQFAQM 397
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 79/156 (50%), Gaps = 22/156 (14%)
Query: 16 WAMAELAKNPKLLKNAQEEVRRVVKNKSS----------INMDDVDQMHYLKCVMKESLR 65
W++ ++ +NP+ +K A EEV+R ++N ++ +++ + L ++KESLR
Sbjct: 279 WSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLR 338
Query: 66 LHPAG-TISFPRETST-RVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFIN- 122
L A I +E T + G Y+I I+ + + DP+++ F +R+++
Sbjct: 339 LSSASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDE 398
Query: 123 -----STIDFNG---QYFDFIPFGTGRRFCPGMLFG 150
+T NG +Y+ ++PFG+G CPG LF
Sbjct: 399 NGKTKTTFYCNGLKLKYY-YMPFGSGATICPGRLFA 433
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 79/156 (50%), Gaps = 22/156 (14%)
Query: 16 WAMAELAKNPKLLKNAQEEVRRVVKNKSS----------INMDDVDQMHYLKCVMKESLR 65
W++ ++ +NP+ +K A EEV+R ++N ++ +++ + L ++KESLR
Sbjct: 279 WSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLR 338
Query: 66 LHPAG-TISFPRETST-RVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFIN- 122
L A I +E T + G Y+I I+ + + DP+++ F +R+++
Sbjct: 339 LSSASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDE 398
Query: 123 -----STIDFNG---QYFDFIPFGTGRRFCPGMLFG 150
+T NG +Y+ ++PFG+G CPG LF
Sbjct: 399 NGKTKTTFYCNGLKLKYY-YMPFGSGATICPGRLFA 433
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 9/140 (6%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L KNP +L+ A EE RV+ + + V Q+ Y+ V+ E+LRL P G +
Sbjct: 274 LSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTGP-A 331
Query: 74 FPRETSTRVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQ 130
F LGG Y + + + + + RD +W D E F PERF N S I +
Sbjct: 332 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA- 390
Query: 131 YFDFIPFGTGRRFCPGMLFG 150
F PFG G+R C G F
Sbjct: 391 ---FKPFGNGQRACIGQQFA 407
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 9/140 (6%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L KNP +L+ A EE RV+ + + V Q+ Y+ V+ E+LRL P G +
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTGP-A 330
Query: 74 FPRETSTRVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQ 130
F LGG Y + + + + + RD +W D E F PERF N S I +
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA- 389
Query: 131 YFDFIPFGTGRRFCPGMLFG 150
F PFG G+R C G F
Sbjct: 390 ---FKPFGNGQRACIGQQFA 406
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 65/147 (44%), Gaps = 3/147 (2%)
Query: 1 DMFXXXXXXXXXXVEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVM 60
D+F + + + L K P++ + EE+ RV+ + D +M Y+ V+
Sbjct: 274 DLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVV 333
Query: 61 KESLRLHPAGTISFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERF 120
E R + P E + GY IP T+V + ++ D + + E F PE F
Sbjct: 334 HEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHF 393
Query: 121 INSTIDFNGQYFD-FIPFGTGRRFCPG 146
+N F +Y D F PF TG+R C G
Sbjct: 394 LNENGKF--KYSDYFKPFSTGKRVCAG 418
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L KNP +L+ A EE RV+ + + V Q+ Y+ V+ E+LRL P +
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAP-A 330
Query: 74 FPRETSTRVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQ 130
F LGG Y + + + + + RD +W D E F PERF N S I +
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA- 389
Query: 131 YFDFIPFGTGRRFCPGMLFG 150
F PFG G+R C G F
Sbjct: 390 ---FKPFGNGQRACEGQQFA 406
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L KNP +L+ A EE RV+ + + V Q+ Y+ V+ E+LRL P +
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAP-A 330
Query: 74 FPRETSTRVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQ 130
F LGG Y + + + + + RD +W D E F PERF N S I +
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA- 389
Query: 131 YFDFIPFGTGRRFCPGMLFG 150
F PFG G+R C G F
Sbjct: 390 ---FKPFGNGQRACIGQQFA 406
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 59/146 (40%), Gaps = 1/146 (0%)
Query: 1 DMFXXXXXXXXXXVEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVM 60
D+F + + + L K+P++ QEE+ V+ S M D M Y V+
Sbjct: 275 DLFVAGTETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVIGRHRSPCMQDRSHMPYTDAVV 334
Query: 61 KESLRLHPAGTISFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERF 120
E R P +T Y IP T + + ++ D K + +F P F
Sbjct: 335 HEIQRYSDLVPTGVPHAVTTDTKFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHF 394
Query: 121 INSTIDFNGQYFDFIPFGTGRRFCPG 146
++ +F + F+PF G+R C G
Sbjct: 395 LDKNGNFKKSDY-FMPFSAGKRICAG 419
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L KNP +L+ A EE RV+ + + V Q+ Y+ V+ E+LRL P +
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAP-A 330
Query: 74 FPRETSTRVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQ 130
F LGG Y + + + + + RD +W D E F PERF N S I +
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA- 389
Query: 131 YFDFIPFGTGRRFCPGMLFG 150
F PFG G+R C G F
Sbjct: 390 ---FKPFGNGQRACIGQQFA 406
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L KNP +L+ A EE RV+ + + V Q+ Y+ V+ E+LRL P +
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAP-A 330
Query: 74 FPRETSTRVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQ 130
F LGG Y + + + + + RD +W D E F PERF N S I +
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA- 389
Query: 131 YFDFIPFGTGRRFCPGMLFG 150
F PFG G+R C G F
Sbjct: 390 ---FKPFGNGQRACIGQQFA 406
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L KNP +L+ A EE RV+ + + V Q+ Y+ V+ E+LRL P +
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAP-A 330
Query: 74 FPRETSTRVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQ 130
F LGG Y + + + + + RD +W D E F PERF N S I +
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA- 389
Query: 131 YFDFIPFGTGRRFCPGMLFG 150
F PFG G+R C G F
Sbjct: 390 ---FKPFGNGQRACIGQQFA 406
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L KNP +L+ A EE RV+ + + V Q+ Y+ V+ E+LRL P +
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAP-A 330
Query: 74 FPRETSTRVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQ 130
F LGG Y + + + + + RD +W D E F PERF N S I +
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA- 389
Query: 131 YFDFIPFGTGRRFCPGMLFG 150
F PFG G+R C G F
Sbjct: 390 ---FKPFGNGQRACIGQQFA 406
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L KNP +L+ A EE RV+ + + V Q+ Y+ V+ E+LRL P +
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAP-A 330
Query: 74 FPRETSTRVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQ 130
F LGG Y + + + + + RD +W D E F PERF N S I +
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA- 389
Query: 131 YFDFIPFGTGRRFCPGMLFG 150
F PFG G+R C G F
Sbjct: 390 ---FKPFGNGQRACIGQQFA 406
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L KNP +L+ A EE RV+ + + V Q+ Y+ V+ E+LRL P +
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAP-A 330
Query: 74 FPRETSTRVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQ 130
F LGG Y + + + + + RD +W D E F PERF N S I +
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA- 389
Query: 131 YFDFIPFGTGRRFCPGMLFG 150
F PFG G+R C G F
Sbjct: 390 ---FKPFGNGQRACIGQQFA 406
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L KNP +L+ A EE RV+ + + V Q+ Y+ V+ E+LRL P +
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAP-A 330
Query: 74 FPRETSTRVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQ 130
F LGG Y + + + + + RD +W D E F PERF N S I +
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA- 389
Query: 131 YFDFIPFGTGRRFCPGMLFG 150
F PFG G+R C G F
Sbjct: 390 ---FKPFGNGQRACIGQQFA 406
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L KNP +L+ A EE RV+ + + V Q+ Y+ V+ E+LRL P +
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAP-A 330
Query: 74 FPRETSTRVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQ 130
F LGG Y + + + + + RD +W D E F PERF N S I +
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA- 389
Query: 131 YFDFIPFGTGRRFCPGMLFG 150
F PFG G+R C G F
Sbjct: 390 ---FKPFGNGQRACIGQQFA 406
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L KNP +L+ A EE RV+ + + V Q+ Y+ V+ E+LRL P +
Sbjct: 274 LSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAP-A 331
Query: 74 FPRETSTRVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQ 130
F LGG Y + + + + + RD +W D E F PERF N S I +
Sbjct: 332 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA- 390
Query: 131 YFDFIPFGTGRRFCPGMLFG 150
F PFG G+R C G F
Sbjct: 391 ---FKPFGNGQRACIGQQFA 407
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L KNP +L+ A EE RV+ + + V Q+ Y+ V+ E+LRL P +
Sbjct: 274 LSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAP-A 331
Query: 74 FPRETSTRVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQ 130
F LGG Y + + + + + RD +W D E F PERF N S I +
Sbjct: 332 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA- 390
Query: 131 YFDFIPFGTGRRFCPGMLFG 150
F PFG G+R C G F
Sbjct: 391 ---FKPFGNGQRACIGQQFA 407
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L KNP +L+ A EE RV+ + + V Q+ Y+ V+ E+LRL P +
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAP-A 330
Query: 74 FPRETSTRVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQ 130
F LGG Y + + + + + RD +W D E F PERF N S I +
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA- 389
Query: 131 YFDFIPFGTGRRFCPGMLFG 150
F PFG G+R C G F
Sbjct: 390 ---FKPFGNGQRACIGQQFA 406
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L KNP +L+ A EE RV+ + + V Q+ Y+ V+ E+LRL P +
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAP-A 330
Query: 74 FPRETSTRVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQ 130
F LGG Y + + + + + RD +W D E F PERF N S I +
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA- 389
Query: 131 YFDFIPFGTGRRFCPGMLFG 150
F PFG G+R C G F
Sbjct: 390 ---FKPFGNGQRACIGQQFA 406
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L KNP +L+ A EE RV+ + + V Q+ Y+ V+ E+LRL P +
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAP-A 330
Query: 74 FPRETSTRVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQ 130
F LGG Y + + + + + RD +W D E F PERF N S I +
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA- 389
Query: 131 YFDFIPFGTGRRFCPGMLFG 150
F PFG G+R C G F
Sbjct: 390 ---FKPFGNGQRACIGQQFA 406
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L KNP +L+ A EE RV+ + + V Q+ Y+ V+ E+LRL P +
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAP-A 330
Query: 74 FPRETSTRVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQ 130
F LGG Y + + + + + RD +W D E F PERF N S I +
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA- 389
Query: 131 YFDFIPFGTGRRFCPGMLFG 150
F PFG G+R C G F
Sbjct: 390 ---FKPFGNGQRACIGQQFA 406
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L KNP +L+ A EE RV+ + + V Q+ Y+ V+ E+LRL P +
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAP-A 330
Query: 74 FPRETSTRVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQ 130
F LGG Y + + + + + RD +W D E F PERF N S I +
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA- 389
Query: 131 YFDFIPFGTGRRFCPGMLFG 150
F PFG G+R C G F
Sbjct: 390 ---FKPFGNGQRACIGQQFA 406
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L KNP +L+ A EE RV+ + + V Q+ Y+ V+ E+LRL P +
Sbjct: 274 LSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAP-A 331
Query: 74 FPRETSTRVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQ 130
F LGG Y + + + + + RD +W D E F PERF N S I +
Sbjct: 332 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA- 390
Query: 131 YFDFIPFGTGRRFCPGMLFG 150
F PFG G+R C G F
Sbjct: 391 ---FKPFGNGQRACIGQQFA 407
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L KNP +L+ A EE RV+ + + V Q+ Y+ V+ E+LRL P +
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAP-A 330
Query: 74 FPRETSTRVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQ 130
F LGG Y + + + + + RD +W D E F PERF N S I +
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA- 389
Query: 131 YFDFIPFGTGRRFCPGMLFG 150
F PFG G+R C G F
Sbjct: 390 ---FKPFGNGQRACIGQQFA 406
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L KNP +L+ A EE RV+ + + V Q+ Y+ V+ E+LRL P +
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAP-A 330
Query: 74 FPRETSTRVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQ 130
F LGG Y + + + + + RD +W D E F PERF N S I +
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA- 389
Query: 131 YFDFIPFGTGRRFCPGMLFG 150
F PFG G+R C G F
Sbjct: 390 ---FKPFGNGQRACIGQQFA 406
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L KNP +L+ A EE RV+ + + V Q+ Y+ V+ E+LRL P +
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAP-A 330
Query: 74 FPRETSTRVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQ 130
F LGG Y + + + + + RD +W D E F PERF N S I +
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA- 389
Query: 131 YFDFIPFGTGRRFCPGMLFG 150
F PFG G+R C G F
Sbjct: 390 ---FKPFGNGQRACIGQQFA 406
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L KNP +L+ A EE RV+ + + V Q+ Y+ V+ E+LRL P +
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAP-A 330
Query: 74 FPRETSTRVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQ 130
F LGG Y + + + + + RD +W D E F PERF N S I +
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA- 389
Query: 131 YFDFIPFGTGRRFCPGMLFG 150
F PFG G+R C G F
Sbjct: 390 ---FKPFGNGQRACIGQQFA 406
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L KNP +L+ A EE RV+ + + V Q+ Y+ V+ E+LRL P +
Sbjct: 276 LSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAP-A 333
Query: 74 FPRETSTRVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQ 130
F LGG Y + + + + + RD +W D E F PERF N S I +
Sbjct: 334 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA- 392
Query: 131 YFDFIPFGTGRRFCPGMLFG 150
F PFG G+R C G F
Sbjct: 393 ---FKPFGNGQRACIGQQFA 409
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L KNP +L+ A EE RV+ + + V Q+ Y+ V+ E+LRL P +
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAP-A 330
Query: 74 FPRETSTRVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQ 130
F LGG Y + + + + + RD +W D E F PERF N S I +
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA- 389
Query: 131 YFDFIPFGTGRRFCPGMLFG 150
F PFG G+R C G F
Sbjct: 390 ---FKPFGNGQRACIGQQFA 406
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L KNP +L+ A EE RV+ + + V Q+ Y+ V+ E+LRL P +
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAP-A 330
Query: 74 FPRETSTRVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQ 130
F LGG Y + + + + + RD +W D E F PERF N S I +
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA- 389
Query: 131 YFDFIPFGTGRRFCPGMLFG 150
F PFG G+R C G F
Sbjct: 390 ---FKPFGNGQRACIGQQFA 406
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 9/133 (6%)
Query: 21 LAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRETST 80
L KNP +L+ A EE RV+ + + V Q+ Y+ V+ E+LRL P +F
Sbjct: 286 LVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAP-AFSLYAKE 343
Query: 81 RVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQYFDFIPF 137
LGG Y + + + + + RD +W D E F PERF N S I + F PF
Sbjct: 344 DTVLGGEYPLEKGDEIMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA----FKPF 399
Query: 138 GTGRRFCPGMLFG 150
G G+R C G F
Sbjct: 400 GNGQRACIGQQFA 412
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 69/140 (49%), Gaps = 9/140 (6%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L KNP +L+ A EE RV+ + + V Q+ Y+ V+ E+LRL P + +
Sbjct: 276 LSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPT-SPA 333
Query: 74 FPRETSTRVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQ 130
F LGG Y + + + + + RD +W D E F PERF N S I +
Sbjct: 334 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA- 392
Query: 131 YFDFIPFGTGRRFCPGMLFG 150
F PFG G+R C G F
Sbjct: 393 ---FKPFGNGQRACIGQQFA 409
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 67/140 (47%), Gaps = 9/140 (6%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L KNP +L+ EE RV+ + + V Q+ Y+ V+ E+LRL P +
Sbjct: 273 LSFALYFLVKNPHVLQKVAEEATRVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAP-A 330
Query: 74 FPRETSTRVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQ 130
F LGG Y + V + + + RD +W D E F PERF N S I +
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA- 389
Query: 131 YFDFIPFGTGRRFCPGMLFG 150
F PFG G+R C G F
Sbjct: 390 ---FKPFGNGQRACIGQQFA 406
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L KNP +L+ A EE RV+ + + V Q+ Y+ V+ E+LRL P +
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAP-A 330
Query: 74 FPRETSTRVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQ 130
F LGG Y + + + + + RD +W D E F PERF N S I +
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA- 389
Query: 131 YFDFIPFGTGRRFCPGMLFG 150
F PFG G+R C G F
Sbjct: 390 ---FKPFGNGQRACIGKQFA 406
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 67/138 (48%), Gaps = 9/138 (6%)
Query: 16 WAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTISFP 75
+A+ L KNP +L+ A EE RV+ + + V Q+ Y+ V+ E+LR+ P +F
Sbjct: 276 FALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRIWPTAP-AFS 333
Query: 76 RETSTRVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQYF 132
LGG Y + + + + + RD VW D E F PERF N S I +
Sbjct: 334 LYAKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAIPQHA--- 390
Query: 133 DFIPFGTGRRFCPGMLFG 150
F PFG G+R C G F
Sbjct: 391 -FKPFGNGQRACIGQQFA 407
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L KNP +L+ A EE RV+ + + V Q+ Y+ V+ E+LRL P +
Sbjct: 276 LSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPT-VPA 333
Query: 74 FPRETSTRVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQ 130
F LGG Y + + + + + RD +W D E F PERF N S I +
Sbjct: 334 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA- 392
Query: 131 YFDFIPFGTGRRFCPGMLFG 150
F PFG G+R C G F
Sbjct: 393 ---FKPFGNGQRACIGQQFA 409
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 67/140 (47%), Gaps = 9/140 (6%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L KNP +L+ A EE RV+ + + V Q+ Y+ V+ E+LRL P
Sbjct: 274 LSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAP-P 331
Query: 74 FPRETSTRVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQ 130
F LGG Y + + + + + RD +W D E F PERF N S I +
Sbjct: 332 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA- 390
Query: 131 YFDFIPFGTGRRFCPGMLFG 150
F PFG G+R C G F
Sbjct: 391 ---FKPFGNGQRACIGQQFA 407
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L KNP +L+ A EE RV+ + + V Q+ Y+ V+ E+LRL P +
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAP-A 330
Query: 74 FPRETSTRVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQ 130
F LGG Y + + + + + RD +W D E F PERF N S I +
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA- 389
Query: 131 YFDFIPFGTGRRFCPGMLFG 150
F P+G G+R C G F
Sbjct: 390 ---FKPYGNGQRACIGQQFA 406
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 67/140 (47%), Gaps = 9/140 (6%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L KNP L+ A EE RV+ + + V Q+ Y+ V+ E+LRL P +
Sbjct: 274 LSFALYFLVKNPHELQKAAEEAARVLVDPVP-SHKQVKQLKYVGMVLNEALRLWPTAP-A 331
Query: 74 FPRETSTRVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQ 130
F LGG Y + + + + + RD VW D E F PERF N S I +
Sbjct: 332 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAIPQHA- 390
Query: 131 YFDFIPFGTGRRFCPGMLFG 150
F PFG G+R C G F
Sbjct: 391 ---FKPFGNGQRACIGQQFA 407
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 62/146 (42%), Gaps = 1/146 (0%)
Query: 1 DMFXXXXXXXXXXVEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVM 60
++F + + L K+P++ EE+ RV+ +D +M Y++ V+
Sbjct: 275 NLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVI 334
Query: 61 KESLRLHPAGTISFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERF 120
E R +S R + +P T VY + ++ RDP + + F P+ F
Sbjct: 335 HEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHF 394
Query: 121 INSTIDFNGQYFDFIPFGTGRRFCPG 146
+N F + F+PF G+R C G
Sbjct: 395 LNEKGQFK-KSDAFVPFSIGKRNCFG 419
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 67/140 (47%), Gaps = 9/140 (6%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L KNP L+ A EE RV+ + + V Q+ Y+ V+ E+LRL P +
Sbjct: 273 LSFALYFLVKNPHELQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAP-A 330
Query: 74 FPRETSTRVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQ 130
F LGG Y + + + + + RD +W D E F PERF N S I +
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA- 389
Query: 131 YFDFIPFGTGRRFCPGMLFG 150
F PFG G+R C G F
Sbjct: 390 ---FKPFGNGQRACIGQQFA 406
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 1/133 (0%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ + L K+P++ EE+ RV+ +D +M Y++ V+ E R +S
Sbjct: 288 LRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMS 347
Query: 74 FPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFD 133
R + +P T VY + ++ RDP + + F P+ F+N F +
Sbjct: 348 LARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFK-KSDA 406
Query: 134 FIPFGTGRRFCPG 146
F+PF G+R C G
Sbjct: 407 FVPFSIGKRNCFG 419
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 1/133 (0%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ + L K+P++ EE+ RV+ +D +M Y++ V+ E R +S
Sbjct: 288 LRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMS 347
Query: 74 FPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFD 133
R + +P T VY + ++ RDP + + F P+ F+N F +
Sbjct: 348 LARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFK-KSDA 406
Query: 134 FIPFGTGRRFCPG 146
F+PF G+R C G
Sbjct: 407 FVPFSIGKRNCFG 419
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 1/133 (0%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ + L K+P++ EE+ RV+ +D +M Y++ V+ E R +S
Sbjct: 288 LRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMS 347
Query: 74 FPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFD 133
R + +P T VY + ++ RDP + + F P+ F+N F +
Sbjct: 348 LARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFK-KSDA 406
Query: 134 FIPFGTGRRFCPG 146
F+PF G+R C G
Sbjct: 407 FVPFSIGKRNCFG 419
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L KNP +L+ A EE RV+ + + V Q+ Y+ V+ E+LRL P +
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAP-A 330
Query: 74 FPRETSTRVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQ 130
F LGG Y + + + + + RD +W D E F PERF N S I +
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA- 389
Query: 131 YFDFIPFGTGRRFCPGMLFG 150
F P+G G+R C G F
Sbjct: 390 ---FKPWGNGQRACIGQQFA 406
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 67/140 (47%), Gaps = 9/140 (6%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L KNP +L+ A EE RV+ + + V Q+ Y+ V+ E+LRL P +
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAP-A 330
Query: 74 FPRETSTRVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQ 130
F LGG Y + + + + + RD +W D E F PERF N S I +
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA- 389
Query: 131 YFDFIPFGTGRRFCPGMLFG 150
F P G G+R C G F
Sbjct: 390 ---FKPHGNGQRACIGQQFA 406
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 61/146 (41%), Gaps = 1/146 (0%)
Query: 1 DMFXXXXXXXXXXVEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVM 60
++F + + L K+P++ EE+ RV+ +D +M Y++ V+
Sbjct: 275 NLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVI 334
Query: 61 KESLRLHPAGTISFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERF 120
E R + R + +P T VY + ++ RDP + + F P+ F
Sbjct: 335 HEIQRFGDVIPMGLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHF 394
Query: 121 INSTIDFNGQYFDFIPFGTGRRFCPG 146
+N F + F+PF G+R C G
Sbjct: 395 LNEKGQFK-KSDAFVPFSIGKRNCFG 419
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 67/140 (47%), Gaps = 9/140 (6%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L KNP +L+ A EE RV+ + + V Q+ Y+ V+ E+LRL P +
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVLVDPVP-SYKQVKQLKYVGMVLNEALRLWPTAP-A 330
Query: 74 FPRETSTRVNLGG-YDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFIN-STIDFNGQ 130
F LGG Y + + + + + RD +W D E F PERF N S I +
Sbjct: 331 FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA- 389
Query: 131 YFDFIPFGTGRRFCPGMLFG 150
F P G G+R C G F
Sbjct: 390 ---FKPAGNGQRACIGQQFA 406
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 7/148 (4%)
Query: 2 MFXXXXXXXXXXVEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMK 61
+F + + + K P + + Q+E+ +V+ + +DD +M Y V+
Sbjct: 276 LFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIH 335
Query: 62 ESLRLHPAGTISFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFI 121
E RL P + GY IP T V+ + + DP+ ++ F P F
Sbjct: 336 EIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHF- 394
Query: 122 NSTIDFNG---QYFDFIPFGTGRRFCPG 146
+D NG + F+PF G+R C G
Sbjct: 395 ---LDANGALKRNEGFMPFSLGKRICAG 419
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 7/148 (4%)
Query: 2 MFXXXXXXXXXXVEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMK 61
+F + + + K P + + Q+E+ +V+ + +DD +M Y V+
Sbjct: 276 LFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIH 335
Query: 62 ESLRLHPAGTISFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFI 121
E RL P + GY IP T V+ + + DP+ ++ F P F
Sbjct: 336 EIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHF- 394
Query: 122 NSTIDFNG---QYFDFIPFGTGRRFCPG 146
+D NG + F+PF G+R C G
Sbjct: 395 ---LDANGALKRNEGFMPFSLGKRICLG 419
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 7/148 (4%)
Query: 2 MFXXXXXXXXXXVEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMK 61
+F + + + K P + + Q+E+ +V+ + +DD +M Y V+
Sbjct: 276 LFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIH 335
Query: 62 ESLRLHPAGTISFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFI 121
E RL P + GY IP T V+ + + DP+ ++ F P F
Sbjct: 336 EIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHF- 394
Query: 122 NSTIDFNG---QYFDFIPFGTGRRFCPG 146
+D NG + F+PF G+R C G
Sbjct: 395 ---LDANGALKRNEGFMPFSLGKRICLG 419
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 7/148 (4%)
Query: 2 MFXXXXXXXXXXVEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMK 61
+F + + + K P + + Q+E+ +V+ + +DD +M Y V+
Sbjct: 276 LFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIH 335
Query: 62 ESLRLHPAGTISFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFI 121
E RL P + GY IP T V+ + + DP+ ++ F P F
Sbjct: 336 EIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHF- 394
Query: 122 NSTIDFNG---QYFDFIPFGTGRRFCPG 146
+D NG + F+PF G+R C G
Sbjct: 395 ---LDANGALKRNEGFMPFSLGKRICLG 419
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 33 EEVRRVVK-NKSSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRETSTRV---NLGGYD 88
EE+R V+K N + M +++M K V+ E LR P T + R V + +
Sbjct: 323 EEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFK 382
Query: 89 IPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFIN 122
+ A ++Y RDPK++DRA+ F+PERF+
Sbjct: 383 VKAGEMLYGYQPLATRDPKIFDRADEFVPERFVG 416
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 7/148 (4%)
Query: 2 MFXXXXXXXXXXVEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMK 61
+F + + + K P + + Q+E+ +V+ + +DD +M Y V+
Sbjct: 276 LFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIH 335
Query: 62 ESLRLHPAGTISFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFI 121
E RL P + GY IP T V+ + + DP+ ++ F P F
Sbjct: 336 EIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHF- 394
Query: 122 NSTIDFNG---QYFDFIPFGTGRRFCPG 146
+D NG + F+PF G+R C G
Sbjct: 395 ---LDANGALKRNEGFMPFSLGKRICLG 419
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 33 EEVRRVVK-NKSSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRETSTRV---NLGGYD 88
EE+R V+K N + M +++M K V+ E LR P T + R V + +
Sbjct: 323 EEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFK 382
Query: 89 IPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFIN 122
+ A ++Y RDPK++DRA+ F+PERF+
Sbjct: 383 VKAGEMLYGYQPLATRDPKIFDRADEFVPERFVG 416
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 15/145 (10%)
Query: 27 LLKNAQEEVRRVVKNKSS-------INMDDVDQMHYLKCVMKESLRLHPAGTISFPRETS 79
LL ++R V+ + + + + + +M YL V++E LRL P F RE
Sbjct: 268 LLLGQHSDIRERVRQEQNKLQLSQELTAETLKKMPYLDQVLQEVLRLIPPVGGGF-RELI 326
Query: 80 TRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDFIPFGT 139
G+ P +V + DP ++ E F PERF + F +PFG
Sbjct: 327 QDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFGG 386
Query: 140 GRRFCPGMLFGKVAAEFARVYTKSF 164
G R C + EFAR+ K F
Sbjct: 387 GLREC-------LGKEFARLEMKLF 404
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 61/149 (40%), Gaps = 7/149 (4%)
Query: 1 DMFXXXXXXXXXXVEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVM 60
+F + + + K P + + E+ +V+ + D +M Y + V+
Sbjct: 275 SLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDRAKMPYTEAVI 334
Query: 61 KESLRLHPAGTISFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERF 120
E R + P + + GY IP T V++ + DP +++ + F P+ F
Sbjct: 335 YEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDAFNPDHF 394
Query: 121 INSTIDFNG---QYFDFIPFGTGRRFCPG 146
+D NG + FIPF G+R C G
Sbjct: 395 ----LDANGALKKTEAFIPFSLGKRICLG 419
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 61/146 (41%), Gaps = 1/146 (0%)
Query: 1 DMFXXXXXXXXXXVEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVM 60
++F + + L K+P++ EE+ RV+ +D +M Y + V+
Sbjct: 275 NLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYTEAVI 334
Query: 61 KESLRLHPAGTISFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERF 120
E R + + + +P T V+ + ++ RDP+ + F P+ F
Sbjct: 335 HEIQRFGDMLPMGLAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHF 394
Query: 121 INSTIDFNGQYFDFIPFGTGRRFCPG 146
++ F + F+PF G+R+C G
Sbjct: 395 LDKKGQFK-KSDAFVPFSIGKRYCFG 419
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 61/138 (44%), Gaps = 3/138 (2%)
Query: 16 WAMAELAKNPKLLKNAQEEVRRVV-KNKSSINMDDVDQMHYLKCVMKESLRLHPAGTISF 74
W LA++ L K E + V +N + D + ++ L +KE+LRL P I
Sbjct: 274 WMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKETLRLRPPIMIMM 333
Query: 75 PRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDF 134
R T + GY IP V ++ QR W F P+R++ +G+ F +
Sbjct: 334 -RMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDN-PASGEKFAY 391
Query: 135 IPFGTGRRFCPGMLFGKV 152
+PFG GR C G F V
Sbjct: 392 VPFGAGRHRCIGENFAYV 409
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 1/135 (0%)
Query: 16 WAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTISFP 75
W + EL ++ +E+ + + S++ + Q+ L+ V+KE+LRLHP I
Sbjct: 267 WTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPP-LIILM 325
Query: 76 RETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDFI 135
R + G+ I +V + R P+ + F+P R+ + + +I
Sbjct: 326 RVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWI 385
Query: 136 PFGTGRRFCPGMLFG 150
PFG GR C G F
Sbjct: 386 PFGAGRHRCVGAAFA 400
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 1/135 (0%)
Query: 16 WAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTISFP 75
W + EL ++ +E+ + + S++ + Q+ L+ V+KE+LRLHP I
Sbjct: 267 WTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPP-LIILM 325
Query: 76 RETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDFI 135
R + G+ I +V + R P+ + F+P R+ + + +I
Sbjct: 326 RVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWI 385
Query: 136 PFGTGRRFCPGMLFG 150
PFG GR C G F
Sbjct: 386 PFGAGRHRCVGAAFA 400
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 1/135 (0%)
Query: 16 WAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTISFP 75
W + EL ++ +E+ + + S++ + Q+ L+ V+KE+LRLHP I
Sbjct: 267 WTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPP-LIILM 325
Query: 76 RETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDFI 135
R + G+ I +V + R P+ + F+P R+ + + +I
Sbjct: 326 RVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWI 385
Query: 136 PFGTGRRFCPGMLFG 150
PFG GR C G F
Sbjct: 386 PFGAGRHRCVGAAFA 400
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 1/135 (0%)
Query: 16 WAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTISFP 75
W + EL ++ +E+ + + S++ + Q+ L+ V+KE+LRLHP I
Sbjct: 267 WTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPP-LIILM 325
Query: 76 RETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDFI 135
R + G+ I +V + R P+ + F+P R+ + + +I
Sbjct: 326 RVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWI 385
Query: 136 PFGTGRRFCPGMLFG 150
PFG GR C G F
Sbjct: 386 PFGAGRHRCVGAAFA 400
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 61 KESLRLHPAGTISFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERF 120
+E+LRL+P I R + LG +P T + ++ + QR + E F PERF
Sbjct: 259 QEALRLYPPAWI-LTRRLERPLLLGEDRLPQGTTLVLSPYVTQR--LYFPEGEAFQPERF 315
Query: 121 INSTIDFNGQYFDFIPFGTGRRFCPGMLFG 150
+ +G+YF PFG G+R C G F
Sbjct: 316 LAERGTPSGRYF---PFGLGQRLCLGRDFA 342
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 33 EEVRRVVKN--KSSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRETST---RVNLGGY 87
EE+R +K+ ++ ++ ++QM K V+ ESLR+ P + + S + +
Sbjct: 305 EEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHDATF 364
Query: 88 DIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFIN 122
++ +++ +DPKV+DR E ++P+RF+
Sbjct: 365 EVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFVG 399
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 60 MKESLRLHPAGTISFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPER 119
+ E+LR P + PR+ S +GG +I TIV+ + A RDP+ +++ +VF R
Sbjct: 306 IAETLRYKPPVQL-IPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHR 364
Query: 120 ---FINSTIDFNGQYFDFIPFGTGRRFCPGMLFGK 151
I S ++ + FG+G C G F K
Sbjct: 365 EDLGIKSAFSGAARH---LAFGSGIHNCVGTAFAK 396
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 61 KESLRLHPAGTISFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERF 120
+E+LRL+P I R + LG +P T + ++ + QR + E F PERF
Sbjct: 259 QEALRLYPPAWI-LTRRLERPLLLGEDRLPPGTTLVLSPYVTQR--LHFPDGEAFRPERF 315
Query: 121 INSTIDFNGQYFDFIPFGTGRRFCPGMLFG 150
+ +G+YF PFG G+R C G F
Sbjct: 316 LEERGTPSGRYF---PFGLGQRLCLGRDFA 342
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 51/130 (39%), Gaps = 13/130 (10%)
Query: 35 VRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRETSTRVNLGGYDIPAKTI 94
V ++ S I V Q Y + ++E R +P G R S G P
Sbjct: 253 VAHALQTCSGIRAALVQQPDYAELFVQEVRRFYPFGPAVVAR-ASQDFEWEGMAFPEGRQ 311
Query: 95 VYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDFIPFGTGRRF----CPG---- 146
V ++++ D W + F PERF ++ F+FIP G G + CPG
Sbjct: 312 VVLDLYGSNHDAATWADPQEFRPERFRA----WDEDSFNFIPQGGGDHYLGHRCPGEWIV 367
Query: 147 MLFGKVAAEF 156
+ KVAA
Sbjct: 368 LAIMKVAAHL 377
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 8/58 (13%)
Query: 93 TIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDFIPFGTGR----RFCPG 146
T V ++++ DP++WD + F PERF + FD IP G G CPG
Sbjct: 312 TSVLLDLYGTNHDPRLWDHPDEFRPERFAEREENL----FDMIPQGGGHAEKGHRCPG 365
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 12/103 (11%)
Query: 55 YLKCVMKESLRLHPAGTISFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEV 114
YLK + +E+LR P + R+T RV LG I V + + + RD +V+ E
Sbjct: 240 YLKAI-EEALRYSPP-VMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEK 297
Query: 115 FLPERFINSTIDFNGQYFDFIPFGTGRRFCPGMLFGKVAAEFA 157
F+P+R N + FG+G C G ++ A A
Sbjct: 298 FIPDRNPNP----------HLSFGSGIHLCLGAPLARLEARIA 330
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 12/103 (11%)
Query: 55 YLKCVMKESLRLHPAGTISFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEV 114
YLK + +E+LR P + R+T RV LG I V + + + RD +V+ E
Sbjct: 240 YLKAI-EEALRYSPP-VMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEK 297
Query: 115 FLPERFINSTIDFNGQYFDFIPFGTGRRFCPGMLFGKVAAEFA 157
F+P+R N + FG+G C G ++ A A
Sbjct: 298 FIPDRNPNP----------HLSFGSGIHLCLGAPLARLEARIA 330
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 10/127 (7%)
Query: 21 LAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRETST 80
+AK+P + + +E++ V+ + I +DD+ ++ ++ + ES+R P + +
Sbjct: 322 IAKHPNVEEAIIKEIQTVIGERD-IKIDDIQKLKVMENFIYESMRYQPVVDLVMRKALED 380
Query: 81 RVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVF-LPERFINSTIDFNGQYFDFIPFGT 139
V + GY + T + +N+ + R E F P F N Y F PFG
Sbjct: 381 DV-IDGYPVKKGTNIILNIGRMHR-------LEFFPKPNEFTLENFAKNVPYRYFQPFGF 432
Query: 140 GRRFCPG 146
G R C G
Sbjct: 433 GPRGCAG 439
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 39/88 (44%), Gaps = 15/88 (17%)
Query: 75 PRETSTR-----VNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNG 129
P ET+TR V +GG IP + V + A RDPK + P RF + T D G
Sbjct: 286 PPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPD-----PHRF-DVTRDTRG 339
Query: 130 QYFDFIPFGTGRRFCPGMLFGKVAAEFA 157
+ FG G FC G K+ E A
Sbjct: 340 H----LSFGQGIHFCMGRPLAKLEGEVA 363
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 39/88 (44%), Gaps = 15/88 (17%)
Query: 75 PRETSTR-----VNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNG 129
P ET+TR V +GG IP + V + A RDPK + P RF + T D G
Sbjct: 287 PPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPD-----PHRF-DVTRDTRG 340
Query: 130 QYFDFIPFGTGRRFCPGMLFGKVAAEFA 157
+ FG G FC G K+ E A
Sbjct: 341 H----LSFGQGIHFCMGRPLAKLEGEVA 364
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 13/98 (13%)
Query: 56 LKCVMKESLR-LHPAGTISFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEV 114
+ V++E LR PA + R T+ V + G D+P+ T V + A RDP +D +
Sbjct: 287 VDTVVEEVLRWTSPA--MHVLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDT 344
Query: 115 FLPERFINSTIDFNGQYFDFIPFGTGRRFCPGMLFGKV 152
FLP R N I FG G C G ++
Sbjct: 345 FLPGRKPNR----------HITFGHGMHHCLGSALARI 372
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 39/88 (44%), Gaps = 15/88 (17%)
Query: 75 PRETSTR-----VNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNG 129
P ET+TR V +GG IP + V + A RDPK + P RF + T D G
Sbjct: 286 PPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPD-----PHRF-DVTRDTRG 339
Query: 130 QYFDFIPFGTGRRFCPGMLFGKVAAEFA 157
+ FG G FC G K+ E A
Sbjct: 340 H----LSFGQGIHFCMGRPLAKLEGEVA 363
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 39/88 (44%), Gaps = 15/88 (17%)
Query: 75 PRETSTR-----VNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNG 129
P ET+TR V +GG IP + V + A RDPK + P RF + T D G
Sbjct: 287 PPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPD-----PHRF-DVTRDTRG 340
Query: 130 QYFDFIPFGTGRRFCPGMLFGKVAAEFA 157
+ FG G FC G K+ E A
Sbjct: 341 H----LSFGQGIHFCMGRPLAKLEGEVA 364
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 39/88 (44%), Gaps = 15/88 (17%)
Query: 75 PRETSTR-----VNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNG 129
P ET+TR V +GG IP + V + A RDPK + P RF + T D G
Sbjct: 287 PPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPD-----PHRF-DVTRDTRG 340
Query: 130 QYFDFIPFGTGRRFCPGMLFGKVAAEFA 157
+ FG G FC G K+ E A
Sbjct: 341 H----LSFGQGIHFCMGRPLAKLEGEVA 364
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 14/138 (10%)
Query: 16 WAMAEL--AKNPKLLKNAQEEVRRVVKNKSSINMDDV-DQMHYLKCVMKESLRLHPAGTI 72
W+M L KN K L +E+ + +N D+V D+M + + ++ES+R P +
Sbjct: 288 WSMLHLMHPKNKKWLDKLHKEIDEF---PAQLNYDNVMDEMPFAERCVRESIRRDPPLLM 344
Query: 73 SFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYF 132
R V +G Y +P I+ + D + + ++ PER + +D
Sbjct: 345 VM-RMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER--DEKVDGA---- 397
Query: 133 DFIPFGTGRRFCPGMLFG 150
FI FG G C G F
Sbjct: 398 -FIGFGAGVHKCIGQKFA 414
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 14/138 (10%)
Query: 16 WAMAEL--AKNPKLLKNAQEEVRRVVKNKSSINMDDV-DQMHYLKCVMKESLRLHPAGTI 72
W+M L KN K L +E+ + +N D+V D+M + + ++ES+R P +
Sbjct: 279 WSMLHLMHPKNKKWLDKLHKEIDEF---PAQLNYDNVMDEMPFAERCVRESIRRDPPLLM 335
Query: 73 SFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYF 132
R V +G Y +P I+ + D + + ++ PER + +D
Sbjct: 336 VM-RMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER--DEKVDGA---- 388
Query: 133 DFIPFGTGRRFCPGMLFG 150
FI FG G C G F
Sbjct: 389 -FIGFGAGVHKCIGQKFA 405
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 14/138 (10%)
Query: 16 WAMAEL--AKNPKLLKNAQEEVRRVVKNKSSINMDDV-DQMHYLKCVMKESLRLHPAGTI 72
W+M L KN K L +E+ + +N D+V D+M + + ++ES+R P +
Sbjct: 273 WSMLHLMHPKNKKWLDKLHKEIDEF---PAQLNYDNVMDEMPFAERCVRESIRRDPPLLM 329
Query: 73 SFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYF 132
R V +G Y +P I+ + D + + ++ PER + +D
Sbjct: 330 VM-RMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER--DEKVDGA---- 382
Query: 133 DFIPFGTGRRFCPGMLFG 150
FI FG G C G F
Sbjct: 383 -FIGFGAGVHKCIGQKFA 399
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 9/97 (9%)
Query: 58 CVMKESLRLHPAGTISFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLP 117
++ E +R+ P +SF R + V +GG I A + + + A RDP+V+D +VF
Sbjct: 266 AIINEMVRMDPP-QLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDH 324
Query: 118 ERFINSTIDFNGQYFDFIPFGTGRRFCPGMLFGKVAA 154
R ++ + + FG G C G + + A
Sbjct: 325 TRPPAASRNLS--------FGLGPHSCAGQIISRAEA 353
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 9/97 (9%)
Query: 58 CVMKESLRLHPAGTISFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLP 117
++ E +R+ P +SF R + V +GG I A + + + A RDP+V+D +VF
Sbjct: 268 AIINEMVRMDPP-QLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDH 326
Query: 118 ERFINSTIDFNGQYFDFIPFGTGRRFCPGMLFGKVAA 154
R ++ + + FG G C G + + A
Sbjct: 327 TRPPAASRNLS--------FGLGPHSCAGQIISRAEA 355
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 38/88 (43%), Gaps = 15/88 (17%)
Query: 75 PRETSTR-----VNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNG 129
P ET+TR V +GG IP + V + A RDP + P RF + T D G
Sbjct: 286 PPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPSQFPD-----PHRF-DVTRDTRG 339
Query: 130 QYFDFIPFGTGRRFCPGMLFGKVAAEFA 157
+ FG G FC G K+ E A
Sbjct: 340 H----LSFGQGIHFCMGRPLAKLEGEVA 363
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 59/154 (38%), Gaps = 27/154 (17%)
Query: 16 WAMAELAKNPKLLKNAQEEVRRV-------VKNKSSINMDDVDQMHYLKCVMKESLRLHP 68
W + L KNP+ L + E+ + V +++ +D L V+ ESLRL
Sbjct: 284 WLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLTA 343
Query: 69 AGTIS--------FPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERF 120
A I+ P NL D ++ + QRDP+++ EVF RF
Sbjct: 344 APFITREVVVDLAMPMADGREFNLRRGD----RLLLFPFLSPQRDPEIYTDPEVFKYNRF 399
Query: 121 INSTIDFNGQYFD--------FIPFGTGRRFCPG 146
+N ++ +P+G G C G
Sbjct: 400 LNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLG 433
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 10/75 (13%)
Query: 82 VNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDFIPFGTGR 141
V + G I A VY++ A RDP+V+ P+R IDF + FG G
Sbjct: 301 VEIKGVRIRAGDAVYVSYLAANRDPEVFPD-----PDR-----IDFERSPNPHVSFGFGP 350
Query: 142 RFCPGMLFGKVAAEF 156
+CPG + ++ +E
Sbjct: 351 HYCPGGMLARLESEL 365
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 10/75 (13%)
Query: 82 VNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDFIPFGTGR 141
V + G I A VY++ A RDP+V+ P+R IDF + FG G
Sbjct: 301 VEIKGVRIRAGDAVYVSYLAANRDPEVFPD-----PDR-----IDFERSPNPHVSFGFGP 350
Query: 142 RFCPGMLFGKVAAEF 156
+CPG + ++ +E
Sbjct: 351 HYCPGGMLARLESEL 365
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 10/75 (13%)
Query: 82 VNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDFIPFGTGR 141
V + G I A VY++ A RDP+V+ P+R IDF + FG G
Sbjct: 301 VEIKGVRIRAGDAVYVSYLAANRDPEVFPD-----PDR-----IDFERSPNPHVSFGFGP 350
Query: 142 RFCPGMLFGKVAAEF 156
+CPG + ++ +E
Sbjct: 351 HYCPGGMLARLESEL 365
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 10/75 (13%)
Query: 82 VNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDFIPFGTGR 141
V + G I A VY++ A RDP+V+ P+R IDF + FG G
Sbjct: 301 VEIKGVRIRAGDAVYVSYLAANRDPEVFPD-----PDR-----IDFERSPNPHVSFGFGP 350
Query: 142 RFCPGMLFGKVAAEF 156
+CPG + ++ +E
Sbjct: 351 HYCPGGMLARLESEL 365
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 10/75 (13%)
Query: 82 VNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDFIPFGTGR 141
V + G I A VY++ A RDP+V+ P+R IDF + FG G
Sbjct: 301 VEIKGVRIRAGDAVYVSYLAANRDPEVFPD-----PDR-----IDFERSPNPHVSFGFGP 350
Query: 142 RFCPGMLFGKVAAEF 156
+CPG + ++ +E
Sbjct: 351 HYCPGGMLARLESEL 365
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 10/75 (13%)
Query: 82 VNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDFIPFGTGR 141
V + G I A VY++ A RDP+V+ P+R IDF + FG G
Sbjct: 301 VEIKGVRIRAGDAVYVSYLAANRDPEVFPD-----PDR-----IDFERSPNPHVSFGFGP 350
Query: 142 RFCPGMLFGKVAAEF 156
+CPG + ++ +E
Sbjct: 351 HYCPGGMLARLESEL 365
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 10/75 (13%)
Query: 82 VNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDFIPFGTGR 141
V + G I A VY++ A RDP+V+ P+R IDF + FG G
Sbjct: 301 VEIKGVRIRAGDAVYVSYLAANRDPEVFPD-----PDR-----IDFERSPNPHVSFGFGP 350
Query: 142 RFCPGMLFGKVAAEF 156
+CPG + ++ +E
Sbjct: 351 HYCPGGMLARLESEL 365
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 59/154 (38%), Gaps = 27/154 (17%)
Query: 16 WAMAELAKNPKLLKNAQEEVRRV-------VKNKSSINMDDVDQMHYLKCVMKESLRLHP 68
W + L KNP+ L + E+ + V +++ +D L V+ ESLRL
Sbjct: 272 WLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLTA 331
Query: 69 AGTIS--------FPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERF 120
A I+ P NL D ++ + QRDP+++ EVF RF
Sbjct: 332 APFITREVVVDLAMPMADGREFNLRRGD----RLLLFPFLSPQRDPEIYTDPEVFKYNRF 387
Query: 121 INSTIDFNGQYFD--------FIPFGTGRRFCPG 146
+N ++ +P+G G C G
Sbjct: 388 LNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLG 421
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 50/130 (38%), Gaps = 13/130 (10%)
Query: 35 VRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRETSTRVNLGGYDIPAKTI 94
V ++ S I V Q Y + ++E R +P R S G P
Sbjct: 245 VAHALQTCSGIRAALVQQPDYAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQ 303
Query: 95 VYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDFIPFGTGRRF----CPG---- 146
V ++++ D W + F PERF ++ F+FIP G G + CPG
Sbjct: 304 VVLDLYGSNHDAATWADPQEFRPERFRA----WDEDSFNFIPQGGGDHYLGHRCPGEWIV 359
Query: 147 MLFGKVAAEF 156
+ KVAA
Sbjct: 360 LAIMKVAAHL 369
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 50/130 (38%), Gaps = 13/130 (10%)
Query: 35 VRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRETSTRVNLGGYDIPAKTI 94
V ++ S I V Q Y + ++E R +P R S G P
Sbjct: 245 VAHALQTCSGIRAALVQQPDYAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQ 303
Query: 95 VYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDFIPFGTGRRF----CPG---- 146
V ++++ D W + F PERF ++ F+FIP G G + CPG
Sbjct: 304 VVLDLYGSNHDAATWADPQEFRPERFRA----WDEDSFNFIPQGGGDHYLGHRCPGEWIV 359
Query: 147 MLFGKVAAEF 156
+ KVAA
Sbjct: 360 LAIMKVAAHL 369
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 50/130 (38%), Gaps = 13/130 (10%)
Query: 35 VRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRETSTRVNLGGYDIPAKTI 94
V ++ S I V Q Y + ++E R +P R S G P
Sbjct: 253 VAHALQTCSGIRAALVQQPDYAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQ 311
Query: 95 VYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDFIPFGTGRRF----CPG---- 146
V ++++ D W + F PERF ++ F+FIP G G + CPG
Sbjct: 312 VVLDLYGSNHDAATWADPQEFRPERFRA----WDEDSFNFIPQGGGDHYLGHRCPGEWIV 367
Query: 147 MLFGKVAAEF 156
+ KVAA
Sbjct: 368 LAIMKVAAHL 377
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 50/130 (38%), Gaps = 13/130 (10%)
Query: 35 VRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRETSTRVNLGGYDIPAKTI 94
V ++ S I V Q Y + ++E R +P R S G P
Sbjct: 253 VAHALQTCSGIRAALVQQPDYAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQ 311
Query: 95 VYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDFIPFGTGRRF----CPG---- 146
V ++++ D W + F PERF ++ F+FIP G G + CPG
Sbjct: 312 VVLDLYGSNHDAATWADPQEFRPERFRA----WDEDSFNFIPQGGGDHYLGHRCPGEWIV 367
Query: 147 MLFGKVAAEF 156
+ KVAA
Sbjct: 368 LAIMKVAAHL 377
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 50/130 (38%), Gaps = 13/130 (10%)
Query: 35 VRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRETSTRVNLGGYDIPAKTI 94
V ++ S I V Q Y + ++E R +P R S G P
Sbjct: 245 VAHALQTCSGIRAALVQQPDYAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQ 303
Query: 95 VYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDFIPFGTGRRF----CPG---- 146
V ++++ D W + F PERF ++ F+FIP G G + CPG
Sbjct: 304 VVLDLYGSNHDAATWADPQEFRPERFRA----WDEDSFNFIPQGGGDHYLGHRCPGEWIV 359
Query: 147 MLFGKVAAEF 156
+ KVAA
Sbjct: 360 LAIMKVAAHL 369
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 67/148 (45%), Gaps = 17/148 (11%)
Query: 16 WAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQ-MHYLKCVMKESLRLHPAGTISF 74
W M L +P+ L+ +EE+ + + +++ + V+ E+LRL A I+
Sbjct: 275 WVMGYLLTHPEALRAVREEI----QGGKHLRLEERQKNTPVFDSVLWETLRLTAAALITR 330
Query: 75 PRETSTRVNLG-GYDIPAKTIVYMNVW---AIQRDPKVWDRAEVFLPERFINS----TID 126
++ L G + + + V+ + Q DP++ + E+F +RF+N+ D
Sbjct: 331 DVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRTEKKD 390
Query: 127 F--NGQYFDF--IPFGTGRRFCPGMLFG 150
F NG + +P+GT CPG F
Sbjct: 391 FFKNGARVKYPSVPWGTEDNLCPGRHFA 418
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 10/83 (12%)
Query: 73 SFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYF 132
+F R T+ V L G I V M + + RDP+ WD P+R+ D +
Sbjct: 300 TFFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDD-----PDRY-----DITRKTS 349
Query: 133 DFIPFGTGRRFCPGMLFGKVAAE 155
+ FG+G C G L ++ E
Sbjct: 350 GHVGFGSGVHMCVGQLVARLEGE 372
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 61/136 (44%), Gaps = 10/136 (7%)
Query: 16 WAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDV-DQMHYLKCVMKESLRLHPAGTISF 74
W+M L +P +K+ + + + + + +N ++V D+M + + +ES+R P +
Sbjct: 275 WSMLHLM-HPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDPP-LLML 332
Query: 75 PRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDF 134
R+ V +G Y +P I+ + D + + + PER + ++ F
Sbjct: 333 MRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--DEKVEGA-----F 385
Query: 135 IPFGTGRRFCPGMLFG 150
I FG G C G FG
Sbjct: 386 IGFGAGVHKCIGQKFG 401
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 61/136 (44%), Gaps = 10/136 (7%)
Query: 16 WAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDV-DQMHYLKCVMKESLRLHPAGTISF 74
W+M L +P +K+ + + + + + +N ++V D+M + + +ES+R P +
Sbjct: 276 WSMLHLM-HPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDPP-LLML 333
Query: 75 PRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDF 134
R+ V +G Y +P I+ + D + + + PER + ++ F
Sbjct: 334 MRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--DEKVEGA-----F 386
Query: 135 IPFGTGRRFCPGMLFG 150
I FG G C G FG
Sbjct: 387 IGFGAGVHKCIGQKFG 402
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 61/136 (44%), Gaps = 10/136 (7%)
Query: 16 WAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDV-DQMHYLKCVMKESLRLHPAGTISF 74
W+M L +P +K+ + + + + + +N ++V D+M + + +ES+R P +
Sbjct: 288 WSMLHLM-HPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDPP-LLML 345
Query: 75 PRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDF 134
R+ V +G Y +P I+ + D + + + PER + ++ F
Sbjct: 346 MRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--DEKVEGA-----F 398
Query: 135 IPFGTGRRFCPGMLFG 150
I FG G C G FG
Sbjct: 399 IGFGAGVHKCIGQKFG 414
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 61/136 (44%), Gaps = 10/136 (7%)
Query: 16 WAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDV-DQMHYLKCVMKESLRLHPAGTISF 74
W+M L +P +K+ + + + + + +N ++V D+M + + +ES+R P +
Sbjct: 275 WSMLHLM-HPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDPP-LLML 332
Query: 75 PRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDF 134
R+ V +G Y +P I+ + D + + + PER + ++ F
Sbjct: 333 MRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--DEKVEGA-----F 385
Query: 135 IPFGTGRRFCPGMLFG 150
I FG G C G FG
Sbjct: 386 IGFGAGVHKCIGQKFG 401
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 61/136 (44%), Gaps = 10/136 (7%)
Query: 16 WAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDV-DQMHYLKCVMKESLRLHPAGTISF 74
W+M L +P +K+ + + + + + +N ++V D+M + + +ES+R P +
Sbjct: 288 WSMLHLM-HPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDPP-LLML 345
Query: 75 PRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDF 134
R+ V +G Y +P I+ + D + + + PER + ++ F
Sbjct: 346 MRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--DEKVEGA-----F 398
Query: 135 IPFGTGRRFCPGMLFG 150
I FG G C G FG
Sbjct: 399 IGFGAGVHKCIGQKFG 414
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 61/136 (44%), Gaps = 10/136 (7%)
Query: 16 WAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDV-DQMHYLKCVMKESLRLHPAGTISF 74
W+M L +P +K+ + + + + + +N ++V D+M + + +ES+R P +
Sbjct: 274 WSMLHLM-HPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDPP-LLML 331
Query: 75 PRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDF 134
R+ V +G Y +P I+ + D + + + PER + ++ F
Sbjct: 332 MRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--DEKVEGA-----F 384
Query: 135 IPFGTGRRFCPGMLFG 150
I FG G C G FG
Sbjct: 385 IGFGAGVHKCIGQKFG 400
>pdb|4DNZ|A Chain A, The Crystal Structures Of Cyp199a4
pdb|4DNZ|B Chain B, The Crystal Structures Of Cyp199a4
pdb|4DNZ|C Chain C, The Crystal Structures Of Cyp199a4
pdb|4DNZ|D Chain D, The Crystal Structures Of Cyp199a4
pdb|4DO1|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|B Chain B, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|C Chain C, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|D Chain D, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4EGM|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGN|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGO|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGP|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
pdb|4EGP|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
Length = 410
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 10/83 (12%)
Query: 73 SFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYF 132
+F R T+ V LGG I V M + + RDP+ W +++ D +
Sbjct: 298 TFFRTTTREVELGGAVIGEGEKVLMFLGSANRDPRRWSDPDLY----------DITRKTS 347
Query: 133 DFIPFGTGRRFCPGMLFGKVAAE 155
+ FG+G C G L ++ E
Sbjct: 348 GHVGFGSGVHMCVGQLVARLEGE 370
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 9/93 (9%)
Query: 60 MKESLRLHPAGTISFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPER 119
++E LR P ++ R + + G IP T V+M RDP+V+ A+ F
Sbjct: 280 VEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRF---- 335
Query: 120 FINSTIDFNGQYFDFIPFGTGRRFCPGMLFGKV 152
+ T+ I FG G FC G ++
Sbjct: 336 --DITVKREAPS---IAFGGGPHFCLGTALARL 363
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 35.0 bits (79), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 9/94 (9%)
Query: 59 VMKESLRLHPAGTISFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPE 118
++E LR P ++ R + + G IP T V+M RDP+V+ A+ F
Sbjct: 289 AVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRF--- 345
Query: 119 RFINSTIDFNGQYFDFIPFGTGRRFCPGMLFGKV 152
+ T+ I FG G FC G ++
Sbjct: 346 ---DITVKREAPS---IAFGGGPHFCLGTALARL 373
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 34.7 bits (78), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/144 (20%), Positives = 65/144 (45%), Gaps = 28/144 (19%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L ++P+ L+ +VK + + + +D++ + +++ GT+
Sbjct: 263 IAFAVLNLLRSPEALE--------LVKAEPGLMRNALDEVLRFENILR-------IGTVR 307
Query: 74 FPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFD 133
F R+ + G I +V++ + + RD V+ R +VF R ++++
Sbjct: 308 FARQD---LEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRDTSASL-------- 356
Query: 134 FIPFGTGRRFCPGMLFGKVAAEFA 157
+G G CPG+ ++ AE A
Sbjct: 357 --AYGRGPHVCPGVSLARLEAEIA 378
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 33.9 bits (76), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/144 (20%), Positives = 64/144 (44%), Gaps = 28/144 (19%)
Query: 14 VEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTIS 73
+ +A+ L ++P+ L+ +VK + + + +D++ +++ GT+
Sbjct: 263 IAFAVLNLLRSPEALE--------LVKAEPGLMRNALDEVLRFDNILR-------IGTVR 307
Query: 74 FPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFD 133
F R+ + G I +V++ + + RD V+ R +VF R ++++
Sbjct: 308 FARQD---LEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRDTSASL-------- 356
Query: 134 FIPFGTGRRFCPGMLFGKVAAEFA 157
+G G CPG+ ++ AE A
Sbjct: 357 --AYGRGPHVCPGVSLARLEAEIA 378
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 33.5 bits (75), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 11/101 (10%)
Query: 57 KCVMKESLRLHPAGTISFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFL 116
V++E++R P + R + +G + +P + + + A RDP + V
Sbjct: 290 SAVIEETMRYDPPVQL-VSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTI-----VGA 343
Query: 117 PERFINSTIDFNGQYFDFIPFGTGRRFCPGMLFGKVAAEFA 157
P+RF D + + FG G FC G ++ A A
Sbjct: 344 PDRF-----DPDRAQIRHLGFGKGAHFCLGAPLARLEATVA 379
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 32.7 bits (73), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 38/100 (38%), Gaps = 15/100 (15%)
Query: 56 LKCVMKESLRLHPAGTISFP---RETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRA 112
+ +++E LR P FP R T+ + G IPA +V V + RD D
Sbjct: 274 IPAIVEEVLRYRP----PFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDP 329
Query: 113 EVFLPERFINSTIDFNGQYFDFIPFGTGRRFCPGMLFGKV 152
+ F P R + FG G FC G ++
Sbjct: 330 DRFDPSRKSGGAAQLS--------FGHGVHFCLGAPLARL 361
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 32.7 bits (73), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 38/100 (38%), Gaps = 15/100 (15%)
Query: 56 LKCVMKESLRLHPAGTISFP---RETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRA 112
+ +++E LR P FP R T+ + G IPA +V V + RD D
Sbjct: 294 IPAIVEEVLRYRP----PFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDP 349
Query: 113 EVFLPERFINSTIDFNGQYFDFIPFGTGRRFCPGMLFGKV 152
+ F P R + FG G FC G ++
Sbjct: 350 DRFDPSRKSGGAAQLS--------FGHGVHFCLGAPLARL 381
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 15/88 (17%)
Query: 75 PRETSTRVNLGGYDIPAKTI-----VYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNG 129
P + + RV DI TI VY+ + A RDP ++ +VF R N +
Sbjct: 280 PTQMTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITRSPNPHLS--- 336
Query: 130 QYFDFIPFGTGRRFCPGMLFGKVAAEFA 157
FG G C G ++ A+ A
Sbjct: 337 -------FGHGHHVCLGSSLARLEAQIA 357
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 52/139 (37%), Gaps = 37/139 (26%)
Query: 18 MAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRE 77
MA + + P A +E+ R + +++S+ L + E + +H
Sbjct: 267 MARMRERPGARGTALDELLRWISHRTSVG---------LARIALEDVEVH---------- 307
Query: 78 TSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDFIPF 137
G I A VY++ A RDP V+ P+R ID + + +
Sbjct: 308 --------GTRIAAGEPVYVSYLAANRDPDVFPD-----PDR-----IDLDRDPNPHLAY 349
Query: 138 GTGRRFCPGMLFGKVAAEF 156
G G FC G + ++ E
Sbjct: 350 GNGHHFCTGAVLARMQTEL 368
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 52/139 (37%), Gaps = 37/139 (26%)
Query: 18 MAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRE 77
MA + + P A +E+ R + +++S+ L + E + +H
Sbjct: 267 MARMRERPGARGTALDELLRWISHRTSVG---------LARIALEDVEVH---------- 307
Query: 78 TSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDFIPF 137
G I A VY++ A RDP V+ P+R ID + + +
Sbjct: 308 --------GTRIAAGEPVYVSYLAANRDPDVFPD-----PDR-----IDLDRDPNPHLAY 349
Query: 138 GTGRRFCPGMLFGKVAAEF 156
G G FC G + ++ E
Sbjct: 350 GNGHHFCTGAVLARMQTEL 368
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 31.2 bits (69), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 8/101 (7%)
Query: 57 KCVMKESLRLHPAGTISFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFL 116
V++E+LR + R + V +G IPA + ++ A+ RD +RA
Sbjct: 276 SAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRD----ERAHGPT 331
Query: 117 PERFINSTIDFNGQYFDFIPFGTGRRFCPGMLFGKVAAEFA 157
+RF + N I FG G CPG ++ A A
Sbjct: 332 ADRFDLTRTSGNRH----ISFGHGPHVCPGAALSRMEAGVA 368
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 31.2 bits (69), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 12/110 (10%)
Query: 48 DDVDQMHYLKCVMKESLRLHPAGTISFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPK 107
D V + LK V +E+LR P + R T +V + I +V + + + RD +
Sbjct: 233 DYVREKGALKAV-EEALRFSPP-VMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEE 290
Query: 108 VWDRAEVFLPERFINSTIDFNGQYFDFIPFGTGRRFCPGMLFGKVAAEFA 157
V+ + F+P+R N + FG+G C G ++ A A
Sbjct: 291 VFKDPDSFIPDRTPNP----------HLSFGSGIHLCLGAPLARLEARIA 330
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 30.8 bits (68), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 51/133 (38%), Gaps = 17/133 (12%)
Query: 27 LLKNAQEEVRRVVKNKSSINMDDVDQMHYLK-------CVMKESLRLHPAGTISFPRETS 79
LL A + ++ +++ +D DQ+ L+ ++E LR G R +
Sbjct: 234 LLIAAHDTTACMIGLGTALLLDSPDQLALLREDPSLVGNAVEELLRYLTIGQFGGERVAT 293
Query: 80 TRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDFIPFGT 139
V LGG I V +V A DP A V PERF D + + FG
Sbjct: 294 RDVELGGVRIAKGEQVVAHVLAADFDP-----AFVEEPERF-----DITRRPAPHLAFGF 343
Query: 140 GRRFCPGMLFGKV 152
G C G ++
Sbjct: 344 GAHQCIGQQLARI 356
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 30.8 bits (68), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 51/133 (38%), Gaps = 17/133 (12%)
Query: 27 LLKNAQEEVRRVVKNKSSINMDDVDQMHYLK-------CVMKESLRLHPAGTISFPRETS 79
LL A + ++ +++ +D DQ+ L+ ++E LR G R +
Sbjct: 234 LLIAAHDTTACMIGLGTALLLDSPDQLALLREDPSLVGNAVEELLRYLTIGQFGGERVAT 293
Query: 80 TRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDFIPFGT 139
V LGG I V +V A DP A V PERF D + + FG
Sbjct: 294 RDVELGGVRIAKGEQVVAHVLAADFDP-----AFVEEPERF-----DITRRPAPHLAFGF 343
Query: 140 GRRFCPGMLFGKV 152
G C G ++
Sbjct: 344 GAHQCIGQQLARI 356
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 30.8 bits (68), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 51/133 (38%), Gaps = 17/133 (12%)
Query: 27 LLKNAQEEVRRVVKNKSSINMDDVDQMHYLK-------CVMKESLRLHPAGTISFPRETS 79
LL A + ++ +++ +D DQ+ L+ ++E LR G R +
Sbjct: 234 LLIAAHDTTACMIGLGTALLLDSPDQLALLREDPSLVGNAVEELLRYLTIGQFGGERVAT 293
Query: 80 TRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDFIPFGT 139
V LGG I V +V A DP A V PERF D + + FG
Sbjct: 294 RDVELGGVRIAKGEQVVAHVLAADFDP-----AFVEEPERF-----DITRRPAPHLAFGF 343
Query: 140 GRRFCPGMLFGKV 152
G C G ++
Sbjct: 344 GAHQCIGQQLARI 356
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 30.0 bits (66), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 10/102 (9%)
Query: 56 LKCVMKESLRLHPAGTISFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVF 115
+ ++E LR + + R T+ V G IPA +V + + A RD W +
Sbjct: 269 ISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDAD-W----MP 323
Query: 116 LPERFINSTIDFNGQYFDFIPFGTGRRFCPGMLFGKVAAEFA 157
P+R ++ T D +G F FG G FC G ++ A
Sbjct: 324 EPDR-LDITRDASGGVF----FGHGIHFCLGAQLARLEGRVA 360
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 30.0 bits (66), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 10/102 (9%)
Query: 56 LKCVMKESLRLHPAGTISFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVF 115
+ ++E LR + + R T+ V G IPA +V + + A RD W +
Sbjct: 269 ISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDAD-W----MP 323
Query: 116 LPERFINSTIDFNGQYFDFIPFGTGRRFCPGMLFGKVAAEFA 157
P+R ++ T D +G F FG G FC G ++ A
Sbjct: 324 EPDR-LDITRDASGGVF----FGHGIHFCLGAQLARLEGRVA 360
>pdb|3UG9|A Chain A, Crystal Structure Of The Closed State Of Channelrhodopsin
Length = 333
Score = 28.1 bits (61), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 28/42 (66%), Gaps = 6/42 (14%)
Query: 54 HYLKCVMKESLRLHPAGTISFPRETSTRVNLGGYDIPAKTIV 95
HYL+ ++ E + +H G I R+T T++N+GG +I +T+V
Sbjct: 281 HYLRVLIHEHILIH--GDI---RKT-TKLNIGGTEIEVETLV 316
>pdb|3BUJ|A Chain A, Crystal Structure Of Calo2
Length = 397
Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 17/99 (17%)
Query: 56 LKCVMKESLRLHPAGTISFPRETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVF 115
L ++E LR P+ S R+ V L G + +V + A RDP+ +DR + F
Sbjct: 266 LAQAVEECLRYDPS-VQSNTRQLDVDVELRGRRLRRDDVVVVLAGAANRDPRRYDRPDDF 324
Query: 116 LPERFINSTIDFNGQYFDFIP---FGTGRRFCPGMLFGK 151
ER D +P FG G R+C G +
Sbjct: 325 DIER-------------DPVPSMSFGAGMRYCLGSYLAR 350
>pdb|3DRX|A Chain A, X-Ray Crystal Structure Of Human Kctd5 Protein
Crystallized In High- Salt Buffer
pdb|3DRX|B Chain B, X-Ray Crystal Structure Of Human Kctd5 Protein
Crystallized In High- Salt Buffer
pdb|3DRX|C Chain C, X-Ray Crystal Structure Of Human Kctd5 Protein
Crystallized In High- Salt Buffer
pdb|3DRX|D Chain D, X-Ray Crystal Structure Of Human Kctd5 Protein
Crystallized In High- Salt Buffer
pdb|3DRX|E Chain E, X-Ray Crystal Structure Of Human Kctd5 Protein
Crystallized In High- Salt Buffer
pdb|3DRY|A Chain A, X-ray Crystal Structure Of Human Kctd5 Protein
Crystallized In Low- Salt Buffer
pdb|3DRY|B Chain B, X-ray Crystal Structure Of Human Kctd5 Protein
Crystallized In Low- Salt Buffer
pdb|3DRY|C Chain C, X-ray Crystal Structure Of Human Kctd5 Protein
Crystallized In Low- Salt Buffer
pdb|3DRY|D Chain D, X-ray Crystal Structure Of Human Kctd5 Protein
Crystallized In Low- Salt Buffer
pdb|3DRY|E Chain E, X-ray Crystal Structure Of Human Kctd5 Protein
Crystallized In Low- Salt Buffer
Length = 202
Score = 27.3 bits (59), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 37 RVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRE 77
++V SS N + DQ +L CV+ + L P GT S P E
Sbjct: 151 QLVSIGSSYNYGNEDQAEFL-CVVSKELHNTPYGTASEPSE 190
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 26.9 bits (58), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 33/82 (40%), Gaps = 10/82 (12%)
Query: 76 RETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDFI 135
R + +GG I A V +++ + RD K ++ ++F R N ++ +
Sbjct: 295 RMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDARR--------NARH--HV 344
Query: 136 PFGTGRRFCPGMLFGKVAAEFA 157
FG G C G + E A
Sbjct: 345 GFGHGIHQCLGQNLARAELEIA 366
>pdb|2YJN|B Chain B, Structure Of The Glycosyltransferase Eryciii From The
Erythromycin Biosynthetic Pathway, In Complex With Its
Activating Partner, Erycii
Length = 381
Score = 26.6 bits (57), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 17/137 (12%)
Query: 14 VEWAMAELAKNPKL---LKNAQEEVRRVVKNKSSINMDD------VDQMHYLKCVMKESL 64
E A+A L +P L A+ VV +++ + D + + E L
Sbjct: 204 TEAAVAALPADPALRALFAGAEMTANTVVDAVLAVSAEPGLAERIADDPAAAQRTVAEVL 263
Query: 65 RLHPAGTISFPRETST-RVNLGGYDIPAKTIVYMNVWAIQRDPKVW---DRAEVFLP--E 118
RLHPA + R T+T V LG + I V + V A RDP+V+ DR +V P +
Sbjct: 264 RLHPA--LHLERRTATAEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEPDRLDVDRPDAD 321
Query: 119 RFINSTIDFNGQYFDFI 135
R +++ G+ + +
Sbjct: 322 RALSAHRGHPGRLEELV 338
>pdb|1QWG|A Chain A, Crystal Structure Of Methanococcus Jannaschii
Phosphosulfolactate Synthase
Length = 251
Score = 26.2 bits (56), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 116 LPERFINSTIDFNGQYFDFIPFGTG 140
LP +F+ + G Y DF+ FG G
Sbjct: 23 LPPKFVEDYLKVCGDYIDFVKFGWG 47
>pdb|2C1X|A Chain A, Structure And Activity Of A Flavonoid 3-O
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
pdb|2C1Z|A Chain A, Structure And Activity Of A Flavonoid 3-O
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
pdb|2C9Z|A Chain A, Structure And Activity Of A Flavonoid 3-0
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
Length = 456
Score = 26.2 bits (56), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Query: 90 PAKTIVYMNVWAIQRDPKVW---DRAEVFLPERFINST 124
PA+ + R P +W D+A V LPE F+ T
Sbjct: 286 PAEVVALSEALEASRVPFIWSLRDKARVHLPEGFLEKT 323
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.138 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,648,025
Number of Sequences: 62578
Number of extensions: 183709
Number of successful extensions: 778
Number of sequences better than 100.0: 156
Number of HSP's better than 100.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 96
Number of HSP's that attempted gapping in prelim test: 641
Number of HSP's gapped (non-prelim): 159
length of query: 165
length of database: 14,973,337
effective HSP length: 91
effective length of query: 74
effective length of database: 9,278,739
effective search space: 686626686
effective search space used: 686626686
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 47 (22.7 bits)