Query 037737
Match_columns 165
No_of_seqs 124 out of 1701
Neff 10.1
Searched_HMMs 46136
Date Fri Mar 29 03:55:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037737.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037737hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0158 Cytochrome P450 CYP3/C 100.0 3.8E-50 8.2E-55 309.3 14.4 160 2-163 302-462 (499)
2 KOG0156 Cytochrome P450 CYP2 s 100.0 1.4E-49 3E-54 308.5 14.9 161 1-162 293-453 (489)
3 PLN02971 tryptophan N-hydroxyl 100.0 1.9E-48 4.1E-53 308.4 16.0 163 1-163 334-498 (543)
4 PLN02394 trans-cinnamate 4-mon 100.0 1.6E-48 3.4E-53 306.6 15.3 163 1-163 300-464 (503)
5 PLN02183 ferulate 5-hydroxylas 100.0 8E-48 1.7E-52 303.4 15.1 161 2-163 312-473 (516)
6 PLN02500 cytochrome P450 90B1 100.0 9.5E-48 2.1E-52 301.4 15.2 163 1-164 286-459 (490)
7 PTZ00404 cytochrome P450; Prov 100.0 1.1E-47 2.4E-52 300.5 14.6 157 2-163 291-448 (482)
8 PLN03234 cytochrome P450 83B1; 100.0 1.2E-47 2.7E-52 301.3 14.8 163 1-163 295-460 (499)
9 PLN02966 cytochrome P450 83A1 100.0 1.9E-47 4.1E-52 300.4 14.8 163 1-163 296-461 (502)
10 KOG0157 Cytochrome P450 CYP4/C 100.0 2.7E-47 6E-52 298.5 14.2 163 1-164 298-463 (497)
11 PF00067 p450: Cytochrome P450 100.0 2.8E-47 6E-52 293.7 12.5 162 2-163 270-431 (463)
12 PLN02169 fatty acid (omega-1)- 100.0 6.7E-47 1.5E-51 297.0 14.4 156 1-163 308-466 (500)
13 PLN00168 Cytochrome P450; Prov 100.0 2E-46 4.3E-51 295.7 15.5 162 2-163 314-481 (519)
14 PLN00110 flavonoid 3',5'-hydro 100.0 2.6E-46 5.6E-51 294.0 15.7 163 1-163 296-461 (504)
15 PLN03195 fatty acid omega-hydr 100.0 1.7E-46 3.6E-51 295.9 13.4 162 1-163 299-482 (516)
16 PLN02774 brassinosteroid-6-oxi 100.0 4.7E-46 1E-50 290.0 14.7 159 1-163 271-432 (463)
17 PLN02687 flavonoid 3'-monooxyg 100.0 6.8E-46 1.5E-50 292.5 15.6 162 2-163 305-470 (517)
18 PLN02738 carotene beta-ring hy 100.0 6E-46 1.3E-50 297.2 15.2 161 1-163 398-560 (633)
19 KOG0159 Cytochrome P450 CYP11/ 100.0 1.8E-46 3.9E-51 285.2 11.4 161 1-163 323-484 (519)
20 PLN03112 cytochrome P450 famil 100.0 9.1E-46 2E-50 291.6 15.2 163 1-163 303-469 (514)
21 PLN02290 cytokinin trans-hydro 100.0 7.4E-46 1.6E-50 292.3 14.0 158 1-163 323-481 (516)
22 PLN03018 homomethionine N-hydr 100.0 1.4E-45 3.1E-50 291.1 15.5 163 1-163 321-488 (534)
23 PLN02655 ent-kaurene oxidase 100.0 1.3E-45 2.8E-50 287.8 15.0 161 1-163 269-429 (466)
24 PLN02426 cytochrome P450, fami 100.0 1.3E-45 2.9E-50 289.6 14.7 162 1-163 300-464 (502)
25 PLN03141 3-epi-6-deoxocathaste 100.0 4.1E-45 9E-50 284.0 14.9 158 1-163 258-419 (452)
26 PLN02936 epsilon-ring hydroxyl 100.0 2.2E-44 4.8E-49 282.2 14.4 163 1-164 285-449 (489)
27 PLN02196 abscisic acid 8'-hydr 100.0 3.7E-44 7.9E-49 279.4 14.1 157 1-163 271-430 (463)
28 PLN02302 ent-kaurenoic acid ox 100.0 2.1E-43 4.5E-48 276.7 14.4 157 2-163 295-455 (490)
29 PLN02987 Cytochrome P450, fami 100.0 4.7E-43 1E-47 273.5 15.5 160 2-163 275-437 (472)
30 KOG0684 Cytochrome P450 [Secon 100.0 2.2E-42 4.9E-47 258.2 11.7 163 2-165 281-452 (486)
31 COG2124 CypX Cytochrome P450 [ 100.0 2E-39 4.4E-44 249.1 11.4 136 2-164 244-379 (411)
32 PLN02648 allene oxide synthase 100.0 3.3E-38 7.2E-43 245.9 13.8 156 4-163 282-452 (480)
33 PF08492 SRP72: SRP72 RNA-bind 66.0 5 0.00011 22.3 1.6 7 116-122 44-50 (59)
34 PF05952 ComX: Bacillus compet 60.4 12 0.00026 20.7 2.4 19 16-34 4-22 (57)
35 COG1759 5-formaminoimidazole-4 56.0 29 0.00062 26.5 4.5 27 130-159 326-352 (361)
36 PRK06789 flagellar motor switc 49.8 19 0.00042 21.0 2.3 40 59-98 21-62 (74)
37 PF11138 DUF2911: Protein of u 48.6 26 0.00056 23.4 3.1 43 76-119 50-99 (145)
38 KOG3506 40S ribosomal protein 48.5 8.3 0.00018 21.0 0.6 11 135-145 12-22 (56)
39 PF12508 DUF3714: Protein of u 46.8 19 0.00042 25.4 2.4 42 53-96 52-93 (200)
40 COG0851 MinE Septum formation 43.9 27 0.00058 21.1 2.3 18 25-42 36-53 (88)
41 PF10796 Anti-adapt_IraP: Sigm 37.6 94 0.002 18.8 4.1 60 5-66 24-84 (87)
42 PF14550 Peptidase_U35_2: Puta 32.3 41 0.00088 21.8 2.0 20 78-97 73-92 (122)
43 PF08285 DPM3: Dolichol-phosph 32.2 79 0.0017 19.3 3.1 26 14-39 56-81 (91)
44 PRK00394 transcription factor; 32.2 15 0.00032 25.4 -0.0 34 113-146 28-61 (179)
45 cd04518 TBP_archaea archaeal T 32.0 11 0.00024 25.9 -0.7 35 113-147 29-63 (174)
46 PF07886 BA14K: BA14K-like pro 31.1 46 0.001 15.8 1.6 16 130-145 16-31 (31)
47 COG2101 SPT15 TATA-box binding 29.9 16 0.00035 25.2 -0.2 35 113-147 35-69 (185)
48 PF14824 Sirohm_synth_M: Siroh 29.2 74 0.0016 15.0 2.3 15 24-38 15-29 (30)
49 PRK13989 cell division topolog 29.0 55 0.0012 19.6 2.0 19 24-42 36-54 (84)
50 PF11227 DUF3025: Protein of u 28.4 37 0.0008 24.2 1.4 25 95-119 186-211 (212)
51 PF13993 YccJ: YccJ-like prote 28.0 60 0.0013 18.2 1.9 31 4-34 8-39 (69)
52 PF10454 DUF2458: Protein of u 28.0 1.5E+02 0.0032 19.9 4.2 27 9-35 7-33 (150)
53 PF07849 DUF1641: Protein of u 27.8 92 0.002 15.8 2.5 18 15-32 13-30 (42)
54 PRK13990 cell division topolog 26.4 66 0.0014 19.6 2.1 18 25-42 42-59 (90)
55 TIGR01215 minE cell division t 26.3 1.3E+02 0.0029 17.8 3.3 18 24-41 34-51 (81)
56 PF14483 Cut8_M: Cut8 dimerisa 25.6 1E+02 0.0022 15.4 3.1 20 14-33 15-35 (38)
57 PRK05933 type III secretion sy 25.0 78 0.0017 24.3 2.6 43 56-98 317-362 (372)
58 cd00652 TBP_TLF TATA box bindi 24.0 57 0.0012 22.4 1.7 34 113-146 29-62 (174)
59 PF14459 Prok-E2_C: Prokaryoti 23.8 23 0.0005 22.3 -0.3 20 128-147 101-120 (131)
60 PF11288 DUF3089: Protein of u 23.7 89 0.0019 22.3 2.6 32 2-33 97-128 (207)
61 PRK13467 F0F1 ATP synthase sub 23.0 1.6E+02 0.0035 16.8 3.1 22 13-34 22-43 (66)
62 PRK13987 cell division topolog 22.9 88 0.0019 19.1 2.2 18 24-41 33-50 (91)
63 PRK13991 cell division topolog 22.8 81 0.0018 19.0 2.0 18 24-41 35-52 (87)
64 PF15300 INT_SG_DDX_CT_C: INTS 22.4 46 0.001 18.9 0.8 15 53-67 40-54 (65)
65 COG1886 FliN Flagellar motor s 21.9 92 0.002 20.5 2.3 41 58-98 84-126 (136)
66 PTZ00218 40S ribosomal protein 21.9 40 0.00087 18.4 0.5 10 136-145 11-20 (54)
67 COG3423 Nlp Predicted transcri 21.7 40 0.00086 19.8 0.5 30 88-125 45-74 (82)
68 PF01924 HypD: Hydrogenase for 21.2 76 0.0016 24.6 2.0 21 2-22 130-150 (355)
69 cd00250 CAS_like Clavaminic ac 21.2 1.2E+02 0.0026 22.0 3.1 34 86-121 221-254 (262)
70 PRK10174 hypothetical protein; 20.7 1.1E+02 0.0025 17.4 2.1 31 4-34 14-45 (75)
71 PF10264 Stork_head: Winged he 20.5 2.1E+02 0.0045 17.1 4.0 38 11-48 13-52 (80)
72 TIGR03779 Bac_Flav_CT_M Bacter 20.2 93 0.002 24.7 2.3 17 80-96 280-296 (410)
73 PRK13988 cell division topolog 20.1 99 0.0021 19.1 2.0 18 24-41 37-54 (97)
No 1
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.8e-50 Score=309.31 Aligned_cols=160 Identities=34% Similarity=0.606 Sum_probs=151.3
Q ss_pred cccccchhHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcCCCCCCccccccChhHHHHHHhHhcCCCCCCCCcceeccCc
Q 037737 2 MFTGGTQTTATTVEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRETSTR 81 (165)
Q Consensus 2 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~e~~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~~ 81 (165)
|++||.|||+++++.++|+|++||++|+||++||+++..+....+++.+.+|+||++||+|+||+||+.+. ..|.+.+|
T Consensus 302 Fl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~-~~R~C~k~ 380 (499)
T KOG0158|consen 302 FLLAGFETTASTLSFALYELAKNPDVQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPF-LNRECTKD 380 (499)
T ss_pred HHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCccc-ccceecCc
Confidence 67899999999999999999999999999999999997766559999999999999999999999999999 56999999
Q ss_pred cccC-CeEeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCcCCCCCccccccccCCCCCCccHHHHHHHHHHHHHh
Q 037737 82 VNLG-GYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDFIPFGTGRRFCPGMLFGKVAAEFARVY 160 (165)
Q Consensus 82 ~~~~-~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ 160 (165)
.+++ ++.|++|+.|.++.+++||||++||||++|+||||.+++.+ ...+..|+|||.|||+|+|..||.+++|+.|+.
T Consensus 381 ~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~PERF~~~~~~-~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~ 459 (499)
T KOG0158|consen 381 YEIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKFKPERFEEENNK-SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAH 459 (499)
T ss_pred eecCCCeEeCCCCEEEeecccccCCcccCCCcccCCCccCCCCccc-ccCCccccCCCCCccccHHHHHHHHHHHHHHHH
Confidence 9999 99999999999999999999999999999999999987755 556779999999999999999999999999999
Q ss_pred hhc
Q 037737 161 TKS 163 (165)
Q Consensus 161 ~l~ 163 (165)
+|.
T Consensus 460 lL~ 462 (499)
T KOG0158|consen 460 LLR 462 (499)
T ss_pred HHh
Confidence 984
No 2
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.4e-49 Score=308.51 Aligned_cols=161 Identities=48% Similarity=0.846 Sum_probs=153.5
Q ss_pred CcccccchhHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcCCCCCCccccccChhHHHHHHhHhcCCCCCCCCcceeccC
Q 037737 1 DMFTGGTQTTATTVEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRETST 80 (165)
Q Consensus 1 ~l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~e~~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~ 80 (165)
|+++||+|||+.++.|++.+|++||++|+|+++|++.+++.+...+.++..++|||+|+|+|++|++|+.|...+|.+.+
T Consensus 293 dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~ 372 (489)
T KOG0156|consen 293 DLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTE 372 (489)
T ss_pred HHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccC
Confidence 68999999999999999999999999999999999999999888999999999999999999999999999999999999
Q ss_pred ccccCCeEeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCcCCCCCccccccccCCCCCCccHHHHHHHHHHHHHh
Q 037737 81 RVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDFIPFGTGRRFCPGMLFGKVAAEFARVY 160 (165)
Q Consensus 81 ~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ 160 (165)
|+.++||.||+||.|.++.|++|+||++|+||++|+||||++++ +.+.....++|||.|+|+|||..+|.+++.++++.
T Consensus 373 d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~~~-d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~ 451 (489)
T KOG0156|consen 373 DTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLDSN-DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLAN 451 (489)
T ss_pred CeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcCCc-cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999985 33335678999999999999999999999999998
Q ss_pred hh
Q 037737 161 TK 162 (165)
Q Consensus 161 ~l 162 (165)
++
T Consensus 452 ll 453 (489)
T KOG0156|consen 452 LL 453 (489)
T ss_pred HH
Confidence 87
No 3
>PLN02971 tryptophan N-hydroxylase
Probab=100.00 E-value=1.9e-48 Score=308.44 Aligned_cols=163 Identities=29% Similarity=0.620 Sum_probs=151.2
Q ss_pred CcccccchhHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcCCCCCCccccccChhHHHHHHhHhcCCCCCCCCcceeccC
Q 037737 1 DMFTGGTQTTATTVEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRETST 80 (165)
Q Consensus 1 ~l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~e~~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~ 80 (165)
++++||+|||+.+++|++++|++||++|+|+++|++++++.+..++.+++.++||++++|+|++|++|+++...+|.+.+
T Consensus 334 ~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~ 413 (543)
T PLN02971 334 ELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALS 413 (543)
T ss_pred HHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCC
Confidence 47899999999999999999999999999999999999987778889999999999999999999999999877899999
Q ss_pred ccccCCeEeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCcC--CCCCccccccccCCCCCCccHHHHHHHHHHHH
Q 037737 81 RVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTID--FNGQYFDFIPFGTGRRFCPGMLFGKVAAEFAR 158 (165)
Q Consensus 81 ~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~--~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l 158 (165)
|+.++||.||||+.|.++.+++||||+.|+||++|+||||++++.+ ....++.|+|||.|+|+|+|++||+.|+++++
T Consensus 414 d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~l 493 (543)
T PLN02971 414 DTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMML 493 (543)
T ss_pred CeeECCEEECCCCEEEECcHHhcCChhhCCCccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999975432 12345679999999999999999999999999
Q ss_pred Hhhhc
Q 037737 159 VYTKS 163 (165)
Q Consensus 159 ~~~l~ 163 (165)
+.++.
T Consensus 494 a~ll~ 498 (543)
T PLN02971 494 ARLLQ 498 (543)
T ss_pred HHHHH
Confidence 99884
No 4
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00 E-value=1.6e-48 Score=306.62 Aligned_cols=163 Identities=33% Similarity=0.665 Sum_probs=149.6
Q ss_pred CcccccchhHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcCCCCCCccccccChhHHHHHHhHhcCCCCCCCCcceeccC
Q 037737 1 DMFTGGTQTTATTVEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRETST 80 (165)
Q Consensus 1 ~l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~e~~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~ 80 (165)
++++||+|||+.+++|++++|++||++|+++++|++++++++...+.+++.++||+++||+|++|++|+++...+|.+.+
T Consensus 300 ~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~ 379 (503)
T PLN02394 300 NINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLE 379 (503)
T ss_pred HHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCC
Confidence 35799999999999999999999999999999999999886666788889999999999999999999999987899999
Q ss_pred ccccCCeEeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCcC--CCCCccccccccCCCCCCccHHHHHHHHHHHH
Q 037737 81 RVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTID--FNGQYFDFIPFGTGRRFCPGMLFGKVAAEFAR 158 (165)
Q Consensus 81 ~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~--~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l 158 (165)
|+.++|+.||+|+.|.++.+.+|+|+++|++|++|+||||++++.+ .......++|||.|+|+|+|+++|++|+++++
T Consensus 380 d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~l 459 (503)
T PLN02394 380 DAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVL 459 (503)
T ss_pred CcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999975432 22345689999999999999999999999999
Q ss_pred Hhhhc
Q 037737 159 VYTKS 163 (165)
Q Consensus 159 ~~~l~ 163 (165)
+.++.
T Consensus 460 a~ll~ 464 (503)
T PLN02394 460 GRLVQ 464 (503)
T ss_pred HHHHH
Confidence 99874
No 5
>PLN02183 ferulate 5-hydroxylase
Probab=100.00 E-value=8e-48 Score=303.39 Aligned_cols=161 Identities=42% Similarity=0.814 Sum_probs=148.9
Q ss_pred cccccchhHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcCCCCCCccccccChhHHHHHHhHhcCCCCCCCCcceeccCc
Q 037737 2 MFTGGTQTTATTVEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRETSTR 81 (165)
Q Consensus 2 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~e~~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~~ 81 (165)
+++||+|||+.+++|++++|++||++|+|+++|++++++....++.+++.++||++++|+|++|++|+++... |.+.+|
T Consensus 312 ~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~-r~~~~d 390 (516)
T PLN02183 312 VMFGGTETVASAIEWAMAELMKSPEDLKRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLLL-HETAED 390 (516)
T ss_pred HHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCcccee-eeccCc
Confidence 6899999999999999999999999999999999999876666788999999999999999999999999975 999999
Q ss_pred cccCCeEeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCcC-CCCCccccccccCCCCCCccHHHHHHHHHHHHHh
Q 037737 82 VNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTID-FNGQYFDFIPFGTGRRFCPGMLFGKVAAEFARVY 160 (165)
Q Consensus 82 ~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~-~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ 160 (165)
++++|+.||||+.|.++.+++|||+++|+||++|+|+||++++.. .....+.|+|||.|+|+|+|+++|++|++++++.
T Consensus 391 ~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ 470 (516)
T PLN02183 391 AEVAGYFIPKRSRVMINAWAIGRDKNSWEDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAH 470 (516)
T ss_pred eeECCEEECCCCEEEEehhhhcCCccccCCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999975432 2234568999999999999999999999999999
Q ss_pred hhc
Q 037737 161 TKS 163 (165)
Q Consensus 161 ~l~ 163 (165)
++.
T Consensus 471 ll~ 473 (516)
T PLN02183 471 LLH 473 (516)
T ss_pred HHh
Confidence 985
No 6
>PLN02500 cytochrome P450 90B1
Probab=100.00 E-value=9.5e-48 Score=301.37 Aligned_cols=163 Identities=25% Similarity=0.423 Sum_probs=146.9
Q ss_pred CcccccchhHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhc-----CCCCCCccccccChhHHHHHHhHhcCCCCCCCCcc
Q 037737 1 DMFTGGTQTTATTVEWAMAELAKNPKLLKNAQEEVRRVVK-----NKSSINMDDVDQMHYLKCVMKESLRLHPAGTISFP 75 (165)
Q Consensus 1 ~l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~e~~~~~~-----~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~ 75 (165)
++++||+|||+.+++|++++|++||++|+|+++|++++.+ +...++.+++.++||++++|+|++|++|+++.. +
T Consensus 286 ~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~-~ 364 (490)
T PLN02500 286 SLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFL-H 364 (490)
T ss_pred HHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCe-e
Confidence 4689999999999999999999999999999999999864 233568889999999999999999999999985 5
Q ss_pred eeccCccccCCeEeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCcCCC------CCccccccccCCCCCCccHHH
Q 037737 76 RETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFN------GQYFDFIPFGTGRRFCPGMLF 149 (165)
Q Consensus 76 r~~~~~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~------~~~~~~~~Fg~G~~~C~G~~~ 149 (165)
|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|+||++++.... ..++.|+|||.|+|+|+|+++
T Consensus 365 R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~ 444 (490)
T PLN02500 365 RKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSEL 444 (490)
T ss_pred eEeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHH
Confidence 99999999999999999999999999999999999999999999997543211 235679999999999999999
Q ss_pred HHHHHHHHHHhhhcc
Q 037737 150 GKVAAEFARVYTKSF 164 (165)
Q Consensus 150 A~~~~~~~l~~~l~~ 164 (165)
|.+|++++++.++.-
T Consensus 445 A~~el~~~la~ll~~ 459 (490)
T PLN02500 445 AKLEMAVFIHHLVLN 459 (490)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999999853
No 7
>PTZ00404 cytochrome P450; Provisional
Probab=100.00 E-value=1.1e-47 Score=300.48 Aligned_cols=157 Identities=29% Similarity=0.549 Sum_probs=147.4
Q ss_pred cccccchhHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcCCCCCCccccccChhHHHHHHhHhcCCCCCCCCcceeccCc
Q 037737 2 MFTGGTQTTATTVEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRETSTR 81 (165)
Q Consensus 2 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~e~~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~~ 81 (165)
+++||+|||+.+++|++++|++||++|+|+++|+++++++....+.+++.++||++++++|++|++|+++...+|.+.+|
T Consensus 291 ~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d 370 (482)
T PTZ00404 291 FFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSND 370 (482)
T ss_pred HHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCC
Confidence 68999999999999999999999999999999999998876667888999999999999999999999997667999999
Q ss_pred ccc-CCeEeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCcCCCCCccccccccCCCCCCccHHHHHHHHHHHHHh
Q 037737 82 VNL-GGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDFIPFGTGRRFCPGMLFGKVAAEFARVY 160 (165)
Q Consensus 82 ~~~-~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ 160 (165)
+++ +|+.||+|+.|.++.+++|+||++|+||++|+||||+++. .+..|+|||.|+|+|+|+++|++|++++++.
T Consensus 371 ~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl~~~-----~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ 445 (482)
T PTZ00404 371 IIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFLNPD-----SNDAFMPFSIGPRNCVGQQFAQDELYLAFSN 445 (482)
T ss_pred EEecCCeEECCCCEEEeeHHHhhCCccccCCccccCccccCCCC-----CCCceeccCCCCCCCccHHHHHHHHHHHHHH
Confidence 999 9999999999999999999999999999999999998642 3458999999999999999999999999999
Q ss_pred hhc
Q 037737 161 TKS 163 (165)
Q Consensus 161 ~l~ 163 (165)
++.
T Consensus 446 ll~ 448 (482)
T PTZ00404 446 IIL 448 (482)
T ss_pred HHH
Confidence 875
No 8
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00 E-value=1.2e-47 Score=301.28 Aligned_cols=163 Identities=45% Similarity=0.812 Sum_probs=150.1
Q ss_pred CcccccchhHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcCCCCCCccccccChhHHHHHHhHhcCCCCCCCCcceeccC
Q 037737 1 DMFTGGTQTTATTVEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRETST 80 (165)
Q Consensus 1 ~l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~e~~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~ 80 (165)
++++||+|||+.+++|++++|++||++|+++++|+++++++....+.+++.++||++++|+|++|++|+++...+|.+.+
T Consensus 295 ~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~ 374 (499)
T PLN03234 295 DIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIA 374 (499)
T ss_pred HHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCC
Confidence 47899999999999999999999999999999999999887667788999999999999999999999999876799999
Q ss_pred ccccCCeEeCCCCEEEEehhhhccCCCCC-CCCCCCCCCCCCCCCcC--CCCCccccccccCCCCCCccHHHHHHHHHHH
Q 037737 81 RVNLGGYDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFINSTID--FNGQYFDFIPFGTGRRFCPGMLFGKVAAEFA 157 (165)
Q Consensus 81 ~~~~~~~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~Rfl~~~~~--~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~ 157 (165)
|++++|+.||+|+.|.++.+.+||||++| +||++|+|+||+++... .......++|||.|+|+|+|+++|++|++++
T Consensus 375 d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~ 454 (499)
T PLN03234 375 DAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIP 454 (499)
T ss_pred CeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHH
Confidence 99999999999999999999999999999 89999999999975432 2334668999999999999999999999999
Q ss_pred HHhhhc
Q 037737 158 RVYTKS 163 (165)
Q Consensus 158 l~~~l~ 163 (165)
++.++.
T Consensus 455 la~ll~ 460 (499)
T PLN03234 455 FANLLY 460 (499)
T ss_pred HHHHHH
Confidence 999875
No 9
>PLN02966 cytochrome P450 83A1
Probab=100.00 E-value=1.9e-47 Score=300.42 Aligned_cols=163 Identities=42% Similarity=0.796 Sum_probs=149.1
Q ss_pred CcccccchhHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcCC--CCCCccccccChhHHHHHHhHhcCCCCCCCCcceec
Q 037737 1 DMFTGGTQTTATTVEWAMAELAKNPKLLKNAQEEVRRVVKNK--SSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRET 78 (165)
Q Consensus 1 ~l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~e~~~~~~~~--~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~ 78 (165)
++++||+|||+.+++|++++|++||++|+|+++|++++++.. ..++.+++.++||++++|+|++|++|+++...+|.+
T Consensus 296 ~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~ 375 (502)
T PLN02966 296 DIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRAC 375 (502)
T ss_pred HHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCccc
Confidence 468999999999999999999999999999999999998643 346788999999999999999999999998767999
Q ss_pred cCccccCCeEeCCCCEEEEehhhhccCCCCC-CCCCCCCCCCCCCCCcCCCCCccccccccCCCCCCccHHHHHHHHHHH
Q 037737 79 STRVNLGGYDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFINSTIDFNGQYFDFIPFGTGRRFCPGMLFGKVAAEFA 157 (165)
Q Consensus 79 ~~~~~~~~~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~ 157 (165)
.+|+.++|+.||+|+.|.++.+.+||||++| ++|++|+|+||++++.+.......|+|||.|+|+|+|++||.+|++++
T Consensus 376 ~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~ 455 (502)
T PLN02966 376 IQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVP 455 (502)
T ss_pred CCCeeEccEEECCCCEEEEecccccCCcccccCChhhCChhhhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999 999999999999754332334568999999999999999999999999
Q ss_pred HHhhhc
Q 037737 158 RVYTKS 163 (165)
Q Consensus 158 l~~~l~ 163 (165)
++.++.
T Consensus 456 la~ll~ 461 (502)
T PLN02966 456 YANLLL 461 (502)
T ss_pred HHHHHH
Confidence 999985
No 10
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00 E-value=2.7e-47 Score=298.53 Aligned_cols=163 Identities=35% Similarity=0.644 Sum_probs=146.3
Q ss_pred CcccccchhHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcCCCC-CCccccccChhHHHHHHhHhcCCCCCCCCcceecc
Q 037737 1 DMFTGGTQTTATTVEWAMAELAKNPKLLKNAQEEVRRVVKNKSS-INMDDVDQMHYLKCVMKESLRLHPAGTISFPRETS 79 (165)
Q Consensus 1 ~l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~e~~~~~~~~~~-~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~ 79 (165)
.|++||+|||+++++|++++|+.||++|+++++|+.++++++.. ......++++|+++||+|+||++|++|... |.+.
T Consensus 298 tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~~-R~~~ 376 (497)
T KOG0157|consen 298 TFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPLVA-RKAT 376 (497)
T ss_pred HheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCCCChhhhhhhHHHHHHHHHHhccCCCCchhh-cccC
Confidence 37899999999999999999999999999999999999975443 233334469999999999999999999976 9999
Q ss_pred Ccccc-CCeEeCCCCEEEEehhhhccCCCCCC-CCCCCCCCCCCCCCcCCCCCccccccccCCCCCCccHHHHHHHHHHH
Q 037737 80 TRVNL-GGYDIPAKTIVYMNVWAIQRDPKVWD-RAEVFLPERFINSTIDFNGQYFDFIPFGTGRRFCPGMLFGKVAAEFA 157 (165)
Q Consensus 80 ~~~~~-~~~~ip~g~~v~~~~~~~~~d~~~~~-~p~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~ 157 (165)
+|+.+ +|+.||+|+.|.++++++|||+.+|+ ||++|||+||.++.......+++|+|||+|+|+|+|++||++|||++
T Consensus 377 ~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~ 456 (497)
T KOG0157|consen 377 KDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLDGEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVV 456 (497)
T ss_pred CCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccCCCCCcCCCCCccccCCCCCcccchhHHHHHHHHHHH
Confidence 99999 48999999999999999999999997 99999999999754443455789999999999999999999999999
Q ss_pred HHhhhcc
Q 037737 158 RVYTKSF 164 (165)
Q Consensus 158 l~~~l~~ 164 (165)
++.+++.
T Consensus 457 l~~ll~~ 463 (497)
T KOG0157|consen 457 LAHLLRR 463 (497)
T ss_pred HHHHHHh
Confidence 9999863
No 11
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00 E-value=2.8e-47 Score=293.75 Aligned_cols=162 Identities=36% Similarity=0.672 Sum_probs=148.5
Q ss_pred cccccchhHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcCCCCCCccccccChhHHHHHHhHhcCCCCCCCCcceeccCc
Q 037737 2 MFTGGTQTTATTVEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRETSTR 81 (165)
Q Consensus 2 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~e~~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~~ 81 (165)
+++||++||+.+++|++++|++||++|+++++|++++.++....+.+++.++|||+++|+|++|++|+++...+|.+.+|
T Consensus 270 ~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d 349 (463)
T PF00067_consen 270 LLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDGREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATED 349 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTSSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSS
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 57899999999999999999999999999999999999666678889999999999999999999999996677999999
Q ss_pred cccCCeEeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCcCCCCCccccccccCCCCCCccHHHHHHHHHHHHHhh
Q 037737 82 VNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDFIPFGTGRRFCPGMLFGKVAAEFARVYT 161 (165)
Q Consensus 82 ~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~~ 161 (165)
++++|+.||+|+.|.++.+.+|+|+++|+||++|+|+||++++.........|+|||.|+|+|+|+++|++|++++|+.+
T Consensus 350 ~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~l 429 (463)
T PF00067_consen 350 VTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDERGISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKL 429 (463)
T ss_dssp EEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTTTSTBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998876333456789999999999999999999999999999
Q ss_pred hc
Q 037737 162 KS 163 (165)
Q Consensus 162 l~ 163 (165)
++
T Consensus 430 l~ 431 (463)
T PF00067_consen 430 LR 431 (463)
T ss_dssp HH
T ss_pred HH
Confidence 85
No 12
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00 E-value=6.7e-47 Score=296.98 Aligned_cols=156 Identities=22% Similarity=0.473 Sum_probs=139.9
Q ss_pred CcccccchhHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcCCCCCCccccccChhHHHHHHhHhcCCCCCCCCcceeccC
Q 037737 1 DMFTGGTQTTATTVEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRETST 80 (165)
Q Consensus 1 ~l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~e~~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~ 80 (165)
++++||+|||+++++|++++|++||++|+|+++|+++++ +.+++.++||++++++|+||++|++|... |.+.+
T Consensus 308 ~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~-r~~~~ 380 (500)
T PLN02169 308 SLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTKF------DNEDLEKLVYLHAALSESMRLYPPLPFNH-KAPAK 380 (500)
T ss_pred HHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCcCc-eecCC
Confidence 368999999999999999999999999999999999874 46788999999999999999999999876 65555
Q ss_pred c-cccCCeEeCCCCEEEEehhhhccCCCCC-CCCCCCCCCCCCCCCcCCC-CCccccccccCCCCCCccHHHHHHHHHHH
Q 037737 81 R-VNLGGYDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFINSTIDFN-GQYFDFIPFGTGRRFCPGMLFGKVAAEFA 157 (165)
Q Consensus 81 ~-~~~~~~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~Rfl~~~~~~~-~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~ 157 (165)
| +..+|+.||+|+.|.++.+++||||++| +||++|+|+||++++++.. ..++.|+|||+|+|+|+|++||++|++++
T Consensus 381 d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~ 460 (500)
T PLN02169 381 PDVLPSGHKVDAESKIVICIYALGRMRSVWGEDALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIV 460 (500)
T ss_pred CCCccCCEEECCCCEEEEcHHHhhCCccccCCChhhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHH
Confidence 5 4459999999999999999999999999 8999999999997654322 23678999999999999999999999999
Q ss_pred HHhhhc
Q 037737 158 RVYTKS 163 (165)
Q Consensus 158 l~~~l~ 163 (165)
++.++.
T Consensus 461 la~ll~ 466 (500)
T PLN02169 461 ALEIIK 466 (500)
T ss_pred HHHHHH
Confidence 999985
No 13
>PLN00168 Cytochrome P450; Provisional
Probab=100.00 E-value=2e-46 Score=295.66 Aligned_cols=162 Identities=32% Similarity=0.632 Sum_probs=148.0
Q ss_pred cccccchhHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcCC-CCCCccccccChhHHHHHHhHhcCCCCCCCCcceeccC
Q 037737 2 MFTGGTQTTATTVEWAMAELAKNPKLLKNAQEEVRRVVKNK-SSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRETST 80 (165)
Q Consensus 2 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~e~~~~~~~~-~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~ 80 (165)
+++||+|||+.+++|++++|++||++|+|+++|+++++++. ..++.+++.++||++++++|++|++|+.+...+|.+.+
T Consensus 314 l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~ 393 (519)
T PLN00168 314 FLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAE 393 (519)
T ss_pred HHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCC
Confidence 68999999999999999999999999999999999998753 45788899999999999999999999998877899999
Q ss_pred ccccCCeEeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCcC-----CCCCccccccccCCCCCCccHHHHHHHHH
Q 037737 81 RVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTID-----FNGQYFDFIPFGTGRRFCPGMLFGKVAAE 155 (165)
Q Consensus 81 ~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~-----~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~ 155 (165)
|++++|+.||+|+.|.++.+++|+||++|++|++|+|+||+++... .....+.|+|||.|+|+|+|++||.+|++
T Consensus 394 d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~ 473 (519)
T PLN00168 394 DMEVGGYLIPKGATVNFMVAEMGRDEREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLE 473 (519)
T ss_pred CccCCCEEECCCCEEEEChHHHhcCccccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHH
Confidence 9999999999999999999999999999999999999999974321 11234579999999999999999999999
Q ss_pred HHHHhhhc
Q 037737 156 FARVYTKS 163 (165)
Q Consensus 156 ~~l~~~l~ 163 (165)
++++.++.
T Consensus 474 ~~la~ll~ 481 (519)
T PLN00168 474 YFVANMVR 481 (519)
T ss_pred HHHHHHHH
Confidence 99999985
No 14
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00 E-value=2.6e-46 Score=293.96 Aligned_cols=163 Identities=39% Similarity=0.769 Sum_probs=149.5
Q ss_pred CcccccchhHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcCCCCCCccccccChhHHHHHHhHhcCCCCCCCCcceeccC
Q 037737 1 DMFTGGTQTTATTVEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRETST 80 (165)
Q Consensus 1 ~l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~e~~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~ 80 (165)
++++||+|||+++++|++++|++||++|+|+++|+++++++...++.+++.++||++++|+|++|++|+.+...+|.+.+
T Consensus 296 ~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~ 375 (504)
T PLN00110 296 NLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQ 375 (504)
T ss_pred hhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCC
Confidence 46899999999999999999999999999999999999887667888999999999999999999999999877799999
Q ss_pred ccccCCeEeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCcCCC---CCccccccccCCCCCCccHHHHHHHHHHH
Q 037737 81 RVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFN---GQYFDFIPFGTGRRFCPGMLFGKVAAEFA 157 (165)
Q Consensus 81 ~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~---~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~ 157 (165)
|++++|+.||+|+.|.++.+++|+|+++|+||++|+|+||++++.... .....++|||.|+|.|+|++||.+|++++
T Consensus 376 d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~ 455 (504)
T PLN00110 376 ACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYI 455 (504)
T ss_pred CeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999996532211 12357999999999999999999999999
Q ss_pred HHhhhc
Q 037737 158 RVYTKS 163 (165)
Q Consensus 158 l~~~l~ 163 (165)
++.++.
T Consensus 456 la~ll~ 461 (504)
T PLN00110 456 LGTLVH 461 (504)
T ss_pred HHHHHH
Confidence 999885
No 15
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00 E-value=1.7e-46 Score=295.93 Aligned_cols=162 Identities=26% Similarity=0.405 Sum_probs=142.2
Q ss_pred CcccccchhHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcC--------------------CCCCCccccccChhHHHHH
Q 037737 1 DMFTGGTQTTATTVEWAMAELAKNPKLLKNAQEEVRRVVKN--------------------KSSINMDDVDQMHYLKCVM 60 (165)
Q Consensus 1 ~l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~e~~~~~~~--------------------~~~~~~~~~~~~~~l~~~i 60 (165)
++++||+|||+.+++|++++|++||++|+|+++|++++..+ +..++.+++.++||++|||
T Consensus 299 ~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi 378 (516)
T PLN03195 299 NFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVI 378 (516)
T ss_pred HHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHH
Confidence 36899999999999999999999999999999999987643 2346788899999999999
Q ss_pred HhHhcCCCCCCCCcceeccCcccc-CCeEeCCCCEEEEehhhhccCCCCC-CCCCCCCCCCCCCCCcCCCCCcccccccc
Q 037737 61 KESLRLHPAGTISFPRETSTRVNL-GGYDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFINSTIDFNGQYFDFIPFG 138 (165)
Q Consensus 61 ~E~lRl~~~~~~~~~r~~~~~~~~-~~~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~Rfl~~~~~~~~~~~~~~~Fg 138 (165)
+|+||++|+++... |.+.+|..+ +|+.||+|+.|.++.+++||||++| +||++|+||||++++......++.|+|||
T Consensus 379 ~EtLRl~p~~p~~~-r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG 457 (516)
T PLN03195 379 TETLRLYPAVPQDP-KGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQ 457 (516)
T ss_pred HHHhhcCCCCcchh-hhhccCcCcCCCcEECCCCEEEEehHhhccChhhhccChhhcCCcccCCCCCcCCCCCceEeccC
Confidence 99999999999876 556665554 9999999999999999999999999 99999999999964322223455799999
Q ss_pred CCCCCCccHHHHHHHHHHHHHhhhc
Q 037737 139 TGRRFCPGMLFGKVAAEFARVYTKS 163 (165)
Q Consensus 139 ~G~~~C~G~~~A~~~~~~~l~~~l~ 163 (165)
+|+|+|+|++||++|++++++.++.
T Consensus 458 ~G~R~CiG~~lA~~e~~~~la~ll~ 482 (516)
T PLN03195 458 AGPRICLGKDSAYLQMKMALALLCR 482 (516)
T ss_pred CCCCcCcCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998874
No 16
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00 E-value=4.7e-46 Score=290.03 Aligned_cols=159 Identities=26% Similarity=0.425 Sum_probs=144.8
Q ss_pred CcccccchhHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcC---CCCCCccccccChhHHHHHHhHhcCCCCCCCCccee
Q 037737 1 DMFTGGTQTTATTVEWAMAELAKNPKLLKNAQEEVRRVVKN---KSSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRE 77 (165)
Q Consensus 1 ~l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~e~~~~~~~---~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~ 77 (165)
++++||+|||+++++|++++|++||++|+++++|++.+.+. ...++.+++.++||++++|+|++|++|+++.. +|.
T Consensus 271 ~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~-~R~ 349 (463)
T PLN02774 271 TILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNGV-LRK 349 (463)
T ss_pred HHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCc-ccc
Confidence 36889999999999999999999999999999999999764 24567889999999999999999999999865 499
Q ss_pred ccCccccCCeEeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCcCCCCCccccccccCCCCCCccHHHHHHHHHHH
Q 037737 78 TSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDFIPFGTGRRFCPGMLFGKVAAEFA 157 (165)
Q Consensus 78 ~~~~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~ 157 (165)
+.+|++++|+.||||+.|.++.+.+|+||++|+||++|+|+||++++.. ....++|||+|+|+|+|+++|.+|++++
T Consensus 350 ~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~---~~~~~lpFG~G~r~C~G~~~A~~e~~~~ 426 (463)
T PLN02774 350 TTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSLE---SHNYFFLFGGGTRLCPGKELGIVEISTF 426 (463)
T ss_pred cCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCcC---CCccccCcCCCCCcCCcHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999965421 1236999999999999999999999999
Q ss_pred HHhhhc
Q 037737 158 RVYTKS 163 (165)
Q Consensus 158 l~~~l~ 163 (165)
++.++.
T Consensus 427 la~Ll~ 432 (463)
T PLN02774 427 LHYFVT 432 (463)
T ss_pred HHHHHH
Confidence 999985
No 17
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00 E-value=6.8e-46 Score=292.50 Aligned_cols=162 Identities=41% Similarity=0.791 Sum_probs=149.4
Q ss_pred cccccchhHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcCCCCCCccccccChhHHHHHHhHhcCCCCCCCCcceeccCc
Q 037737 2 MFTGGTQTTATTVEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRETSTR 81 (165)
Q Consensus 2 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~e~~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~~ 81 (165)
+++||+|||+.+++|++++|++||++++++++|++++++....++.+++.++||++++|+|++|++|+++...+|.+.+|
T Consensus 305 ~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d 384 (517)
T PLN02687 305 LFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEE 384 (517)
T ss_pred HhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCC
Confidence 68999999999999999999999999999999999998877778889999999999999999999999998777999999
Q ss_pred cccCCeEeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCcC----CCCCccccccccCCCCCCccHHHHHHHHHHH
Q 037737 82 VNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTID----FNGQYFDFIPFGTGRRFCPGMLFGKVAAEFA 157 (165)
Q Consensus 82 ~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~----~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~ 157 (165)
++++|+.||+|+.|.++.+.+|+|+++|+||++|+|+||++++.. .......++|||.|+|+|+|++||.+|++++
T Consensus 385 ~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~ 464 (517)
T PLN02687 385 CEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLL 464 (517)
T ss_pred eeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHH
Confidence 999999999999999999999999999999999999999975321 1223457999999999999999999999999
Q ss_pred HHhhhc
Q 037737 158 RVYTKS 163 (165)
Q Consensus 158 l~~~l~ 163 (165)
++.++.
T Consensus 465 la~ll~ 470 (517)
T PLN02687 465 TATLVH 470 (517)
T ss_pred HHHHHH
Confidence 999985
No 18
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00 E-value=6e-46 Score=297.23 Aligned_cols=161 Identities=32% Similarity=0.601 Sum_probs=146.8
Q ss_pred CcccccchhHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcCCCCCCccccccChhHHHHHHhHhcCCCCCCCCcceeccC
Q 037737 1 DMFTGGTQTTATTVEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRETST 80 (165)
Q Consensus 1 ~l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~e~~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~ 80 (165)
++++||+|||+.+++|++++|++||++|+||++|+++++++ ..++.+++.++|||++||+|+||++|+.+... |.+.+
T Consensus 398 ~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~-~~~t~edL~kLPYL~AVIkEtLRL~p~~p~~~-R~a~~ 475 (633)
T PLN02738 398 TMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD-RFPTIEDMKKLKYTTRVINESLRLYPQPPVLI-RRSLE 475 (633)
T ss_pred HHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC-CCCCHHHHccCHHHHHHHHHHHhcCCCccccc-eeecc
Confidence 36899999999999999999999999999999999999874 56788999999999999999999999999855 88899
Q ss_pred ccccCCeEeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCc--CCCCCccccccccCCCCCCccHHHHHHHHHHHH
Q 037737 81 RVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTI--DFNGQYFDFIPFGTGRRFCPGMLFGKVAAEFAR 158 (165)
Q Consensus 81 ~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~--~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l 158 (165)
|..++||.||+|+.|.++.+.+||||++|+||++|+||||+.+.. +.....+.++|||.|+|+|+|++||++|++++|
T Consensus 476 d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~L 555 (633)
T PLN02738 476 NDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFASFENVVAT 555 (633)
T ss_pred CceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCCCCceeCCCCCCCCCcCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999985321 223345689999999999999999999999999
Q ss_pred Hhhhc
Q 037737 159 VYTKS 163 (165)
Q Consensus 159 ~~~l~ 163 (165)
+.++.
T Consensus 556 A~Llr 560 (633)
T PLN02738 556 AMLVR 560 (633)
T ss_pred HHHHH
Confidence 99985
No 19
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.8e-46 Score=285.21 Aligned_cols=161 Identities=30% Similarity=0.550 Sum_probs=152.1
Q ss_pred CcccccchhHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcC-CCCCCccccccChhHHHHHHhHhcCCCCCCCCcceecc
Q 037737 1 DMFTGGTQTTATTVEWAMAELAKNPKLLKNAQEEVRRVVKN-KSSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRETS 79 (165)
Q Consensus 1 ~l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~e~~~~~~~-~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~ 79 (165)
|+++||.|||+.++.|++|+|++||+.|++|++|+.+++.. +..++.+.+.++|||+|||||++|+||.++... |...
T Consensus 323 dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~-R~l~ 401 (519)
T KOG0159|consen 323 DLLAAGVDTTSNTLLWALYELARNPEVQQRLREEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGNG-RVLP 401 (519)
T ss_pred HHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccccc-cccc
Confidence 68899999999999999999999999999999999999987 677888999999999999999999999999966 9999
Q ss_pred CccccCCeEeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCcCCCCCccccccccCCCCCCccHHHHHHHHHHHHH
Q 037737 80 TRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDFIPFGTGRRFCPGMLFGKVAAEFARV 159 (165)
Q Consensus 80 ~~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~ 159 (165)
+|..++||.||+||.|.+..+.+.+||+.|++|++|+|+||++++- .+..++.++|||.|+|+|+|+.||.+||.+.|+
T Consensus 402 ~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~F~PeRWL~~~~-~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLa 480 (519)
T KOG0159|consen 402 KDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEEFLPERWLKPST-KTIHPFASLPFGFGPRMCLGRRIAELELHLLLA 480 (519)
T ss_pred hhceeccceecCCCeEEEeehhhccChhhCCCccccChhhhccccc-CCCCCceecCCCCCccccchHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998763 456788999999999999999999999999999
Q ss_pred hhhc
Q 037737 160 YTKS 163 (165)
Q Consensus 160 ~~l~ 163 (165)
.++.
T Consensus 481 rllr 484 (519)
T KOG0159|consen 481 RLLR 484 (519)
T ss_pred HHHH
Confidence 9874
No 20
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00 E-value=9.1e-46 Score=291.64 Aligned_cols=163 Identities=39% Similarity=0.721 Sum_probs=148.7
Q ss_pred CcccccchhHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcCCCCCCccccccChhHHHHHHhHhcCCCCCCCCcceeccC
Q 037737 1 DMFTGGTQTTATTVEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRETST 80 (165)
Q Consensus 1 ~l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~e~~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~ 80 (165)
++++||+|||+++++|++++|++||++|+++++|+++++++...++.+++.++||++++|+|++|++|+.+...+|.+.+
T Consensus 303 ~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~ 382 (514)
T PLN03112 303 DMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLR 382 (514)
T ss_pred HHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCC
Confidence 46899999999999999999999999999999999999887667889999999999999999999999999876799999
Q ss_pred ccccCCeEeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCc---CC-CCCccccccccCCCCCCccHHHHHHHHHH
Q 037737 81 RVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTI---DF-NGQYFDFIPFGTGRRFCPGMLFGKVAAEF 156 (165)
Q Consensus 81 ~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~---~~-~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~ 156 (165)
|++++|+.||+|+.|.++.+.+|+||++|+||++|+|+||+.+.. .. ......++|||.|+|+|+|++||.+++++
T Consensus 383 d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~ 462 (514)
T PLN03112 383 ATTINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLM 462 (514)
T ss_pred CeeEcCEEeCCCCEEEEehHHhhCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHH
Confidence 999999999999999999999999999999999999999875421 11 12345799999999999999999999999
Q ss_pred HHHhhhc
Q 037737 157 ARVYTKS 163 (165)
Q Consensus 157 ~l~~~l~ 163 (165)
+++.++.
T Consensus 463 ~la~ll~ 469 (514)
T PLN03112 463 ALARLFH 469 (514)
T ss_pred HHHHHHH
Confidence 9999874
No 21
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00 E-value=7.4e-46 Score=292.28 Aligned_cols=158 Identities=31% Similarity=0.557 Sum_probs=145.6
Q ss_pred CcccccchhHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcCCCCCCccccccChhHHHHHHhHhcCCCCCCCCcceeccC
Q 037737 1 DMFTGGTQTTATTVEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRETST 80 (165)
Q Consensus 1 ~l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~e~~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~ 80 (165)
++++||+|||+.+++|++++|++||++|+|+++|++++++++ .++.+++.++||+++||+|++|++|+++. .+|.+.+
T Consensus 323 ~~~~AG~dTta~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~-~~R~~~~ 400 (516)
T PLN02290 323 TFFFAGHETTALLLTWTLMLLASNPTWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATL-LPRMAFE 400 (516)
T ss_pred HHHhhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccc-cceeecC
Confidence 368999999999999999999999999999999999998764 67889999999999999999999999986 5799999
Q ss_pred ccccCCeEeCCCCEEEEehhhhccCCCCC-CCCCCCCCCCCCCCCcCCCCCccccccccCCCCCCccHHHHHHHHHHHHH
Q 037737 81 RVNLGGYDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFINSTIDFNGQYFDFIPFGTGRRFCPGMLFGKVAAEFARV 159 (165)
Q Consensus 81 ~~~~~~~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~ 159 (165)
|++++|+.||+|+.|.++.+++|+||++| +||++|+||||++.+. .....|+|||.|+|+|+|+++|++|++++++
T Consensus 401 d~~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~~---~~~~~~~pFG~G~R~C~G~~lA~~el~l~la 477 (516)
T PLN02290 401 DIKLGDLHIPKGLSIWIPVLAIHHSEELWGKDANEFNPDRFAGRPF---APGRHFIPFAAGPRNCIGQAFAMMEAKIILA 477 (516)
T ss_pred CeeECCEEECCCCEEEecHHHhcCChhhhCCChhhcCccccCCCCC---CCCCeEecCCCCCCCCccHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 8999999999995421 1234799999999999999999999999999
Q ss_pred hhhc
Q 037737 160 YTKS 163 (165)
Q Consensus 160 ~~l~ 163 (165)
.++.
T Consensus 478 ~ll~ 481 (516)
T PLN02290 478 MLIS 481 (516)
T ss_pred HHHH
Confidence 9874
No 22
>PLN03018 homomethionine N-hydroxylase
Probab=100.00 E-value=1.4e-45 Score=291.13 Aligned_cols=163 Identities=27% Similarity=0.518 Sum_probs=149.5
Q ss_pred CcccccchhHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcCCCCCCccccccChhHHHHHHhHhcCCCCCCCCcceeccC
Q 037737 1 DMFTGGTQTTATTVEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRETST 80 (165)
Q Consensus 1 ~l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~e~~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~ 80 (165)
++++||+|||+.+++|++++|++||++|+++++|++++++.....+.+++.++||++++++|++|++|+.+...+|.+.+
T Consensus 321 ~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~ 400 (534)
T PLN03018 321 EFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQ 400 (534)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCC
Confidence 36899999999999999999999999999999999999987777888899999999999999999999999876799999
Q ss_pred ccccCCeEeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCcCC-----CCCccccccccCCCCCCccHHHHHHHHH
Q 037737 81 RVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDF-----NGQYFDFIPFGTGRRFCPGMLFGKVAAE 155 (165)
Q Consensus 81 ~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~-----~~~~~~~~~Fg~G~~~C~G~~~A~~~~~ 155 (165)
|++++|+.||+|+.|.++.+++|+||++|++|++|+|+||++++.+. ......++|||.|+|+|+|+++|.+|++
T Consensus 401 d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~ 480 (534)
T PLN03018 401 DTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMV 480 (534)
T ss_pred CeeECCEEECCCCEEEEChHHhcCCcccCCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999754321 1234679999999999999999999999
Q ss_pred HHHHhhhc
Q 037737 156 FARVYTKS 163 (165)
Q Consensus 156 ~~l~~~l~ 163 (165)
++++.++.
T Consensus 481 ~~la~ll~ 488 (534)
T PLN03018 481 MMLARFLQ 488 (534)
T ss_pred HHHHHHHH
Confidence 99999884
No 23
>PLN02655 ent-kaurene oxidase
Probab=100.00 E-value=1.3e-45 Score=287.80 Aligned_cols=161 Identities=32% Similarity=0.563 Sum_probs=148.5
Q ss_pred CcccccchhHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcCCCCCCccccccChhHHHHHHhHhcCCCCCCCCcceeccC
Q 037737 1 DMFTGGTQTTATTVEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRETST 80 (165)
Q Consensus 1 ~l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~e~~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~ 80 (165)
++++||+|||+++++|++++|++||++|+++++|++.+++... ++.+++.++||++++++|++|++|+.+...+|.+.+
T Consensus 269 ~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~ 347 (466)
T PLN02655 269 EPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGDER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHE 347 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCC-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCC
Confidence 3689999999999999999999999999999999999987644 888999999999999999999999999877799999
Q ss_pred ccccCCeEeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCcCCCCCccccccccCCCCCCccHHHHHHHHHHHHHh
Q 037737 81 RVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDFIPFGTGRRFCPGMLFGKVAAEFARVY 160 (165)
Q Consensus 81 ~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ 160 (165)
|++++|+.||+|+.|.++.+++|||++.|+||++|+|+||++++.. ......++|||+|+|.|+|++||..+++++++.
T Consensus 348 d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~~~~-~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ 426 (466)
T PLN02655 348 DTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGEKYE-SADMYKTMAFGAGKRVCAGSLQAMLIACMAIAR 426 (466)
T ss_pred CcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCCCCcc-cCCcccccCCCCCCCCCCcHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999975432 123467999999999999999999999999999
Q ss_pred hhc
Q 037737 161 TKS 163 (165)
Q Consensus 161 ~l~ 163 (165)
++.
T Consensus 427 ll~ 429 (466)
T PLN02655 427 LVQ 429 (466)
T ss_pred HHH
Confidence 884
No 24
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00 E-value=1.3e-45 Score=289.60 Aligned_cols=162 Identities=23% Similarity=0.377 Sum_probs=145.7
Q ss_pred CcccccchhHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcCC-CCCCccccccChhHHHHHHhHhcCCCCCCCCcceecc
Q 037737 1 DMFTGGTQTTATTVEWAMAELAKNPKLLKNAQEEVRRVVKNK-SSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRETS 79 (165)
Q Consensus 1 ~l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~e~~~~~~~~-~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~ 79 (165)
++++||+|||+.+++|++++|++||++|+|+++|++++.++. ..++.+++.++||++++|+|++|++|+++... |.+.
T Consensus 300 ~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~~~l~~LpYl~avi~EtLRl~p~v~~~~-r~~~ 378 (502)
T PLN02426 300 SFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFEEMKEMHYLHAALYESMRLFPPVQFDS-KFAA 378 (502)
T ss_pred HHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCHHHHhcChHHHHHHHHHHhCCCCCCCcc-eeec
Confidence 368999999999999999999999999999999999988753 35788999999999999999999999999876 8888
Q ss_pred Ccccc-CCeEeCCCCEEEEehhhhccCCCCC-CCCCCCCCCCCCCCCcCCCCCccccccccCCCCCCccHHHHHHHHHHH
Q 037737 80 TRVNL-GGYDIPAKTIVYMNVWAIQRDPKVW-DRAEVFLPERFINSTIDFNGQYFDFIPFGTGRRFCPGMLFGKVAAEFA 157 (165)
Q Consensus 80 ~~~~~-~~~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~ 157 (165)
+|..+ +|+.||+|+.|.++.+++|||+++| +||++|+||||+++........+.++|||+|+|+|+|+++|.+|++++
T Consensus 379 ~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~ 458 (502)
T PLN02426 379 EDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGVFVPENPFKYPVFQAGLRVCLGKEMALMEMKSV 458 (502)
T ss_pred cCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCCcCCCCCcccCCCCCCCCCCccHHHHHHHHHHH
Confidence 88777 8999999999999999999999999 999999999999743211224457999999999999999999999999
Q ss_pred HHhhhc
Q 037737 158 RVYTKS 163 (165)
Q Consensus 158 l~~~l~ 163 (165)
++.++.
T Consensus 459 la~ll~ 464 (502)
T PLN02426 459 AVAVVR 464 (502)
T ss_pred HHHHHH
Confidence 999875
No 25
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00 E-value=4.1e-45 Score=283.99 Aligned_cols=158 Identities=23% Similarity=0.359 Sum_probs=143.6
Q ss_pred CcccccchhHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcC----CCCCCccccccChhHHHHHHhHhcCCCCCCCCcce
Q 037737 1 DMFTGGTQTTATTVEWAMAELAKNPKLLKNAQEEVRRVVKN----KSSINMDDVDQMHYLKCVMKESLRLHPAGTISFPR 76 (165)
Q Consensus 1 ~l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~e~~~~~~~----~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~r 76 (165)
++++||+|||+.+++|++++|++||++|+++++|++++.+. ...++.+++.++||+++||+|++|++|+.+. .+|
T Consensus 258 ~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~-~~R 336 (452)
T PLN03141 258 DMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIING-VMR 336 (452)
T ss_pred HHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCC-cce
Confidence 46899999999999999999999999999999999887642 2346778889999999999999999999875 469
Q ss_pred eccCccccCCeEeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCcCCCCCccccccccCCCCCCccHHHHHHHHHH
Q 037737 77 ETSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDFIPFGTGRRFCPGMLFGKVAAEF 156 (165)
Q Consensus 77 ~~~~~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~ 156 (165)
.+.+|++++||.||+|+.|.++.+.+|+|+++|+||++|+||||++++. .+..|+|||.|+|+|+|+++|.+|+++
T Consensus 337 ~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~----~~~~~~pFG~G~R~C~G~~lA~~el~~ 412 (452)
T PLN03141 337 KAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWRWQEKDM----NNSSFTPFGGGQRLCPGLDLARLEASI 412 (452)
T ss_pred eecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccCcccccCCCC----CCCCCCCCCCCCCCCChHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999997532 245799999999999999999999999
Q ss_pred HHHhhhc
Q 037737 157 ARVYTKS 163 (165)
Q Consensus 157 ~l~~~l~ 163 (165)
+++.++.
T Consensus 413 ~la~ll~ 419 (452)
T PLN03141 413 FLHHLVT 419 (452)
T ss_pred HHHHHHh
Confidence 9999874
No 26
>PLN02936 epsilon-ring hydroxylase
Probab=100.00 E-value=2.2e-44 Score=282.24 Aligned_cols=163 Identities=34% Similarity=0.586 Sum_probs=146.4
Q ss_pred CcccccchhHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcCCCCCCccccccChhHHHHHHhHhcCCCCCCCCcceeccC
Q 037737 1 DMFTGGTQTTATTVEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRETST 80 (165)
Q Consensus 1 ~l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~e~~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~ 80 (165)
++++||+|||+.+++|++++|++||++|+++++|++++++.+ ..+.+++.++||++||++|++|++|+.+...+|.+.+
T Consensus 285 ~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~~-~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~ 363 (489)
T PLN02936 285 SMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVLQGR-PPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVE 363 (489)
T ss_pred HHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCC-CCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccC
Confidence 368899999999999999999999999999999999998754 4678889999999999999999999998888777777
Q ss_pred ccccCCeEeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCcC--CCCCccccccccCCCCCCccHHHHHHHHHHHH
Q 037737 81 RVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTID--FNGQYFDFIPFGTGRRFCPGMLFGKVAAEFAR 158 (165)
Q Consensus 81 ~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~--~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l 158 (165)
|+.++|+.||+|+.|.++.+.+|+||++|+||++|+|+||+.++.. ....+..++|||.|+|.|+|+++|++++++++
T Consensus 364 ~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~l 443 (489)
T PLN02936 364 DVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVAL 443 (489)
T ss_pred ccccCCeEECCCCEEEecHHhccCChhhCCCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHH
Confidence 8888999999999999999999999999999999999999964421 12234579999999999999999999999999
Q ss_pred Hhhhcc
Q 037737 159 VYTKSF 164 (165)
Q Consensus 159 ~~~l~~ 164 (165)
+.++..
T Consensus 444 a~ll~~ 449 (489)
T PLN02936 444 AVLLQR 449 (489)
T ss_pred HHHHHh
Confidence 999853
No 27
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00 E-value=3.7e-44 Score=279.40 Aligned_cols=157 Identities=27% Similarity=0.439 Sum_probs=144.9
Q ss_pred CcccccchhHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcC---CCCCCccccccChhHHHHHHhHhcCCCCCCCCccee
Q 037737 1 DMFTGGTQTTATTVEWAMAELAKNPKLLKNAQEEVRRVVKN---KSSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRE 77 (165)
Q Consensus 1 ~l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~e~~~~~~~---~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~ 77 (165)
++++||+|||+.+++|++++|++||++|+++++|++++.+. ....+.+++.++||++++++|++|++|+.+... |.
T Consensus 271 ~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~-R~ 349 (463)
T PLN02196 271 GVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFTF-RE 349 (463)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCccccc-ee
Confidence 36899999999999999999999999999999999988763 345778889999999999999999999998866 99
Q ss_pred ccCccccCCeEeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCcCCCCCccccccccCCCCCCccHHHHHHHHHHH
Q 037737 78 TSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDFIPFGTGRRFCPGMLFGKVAAEFA 157 (165)
Q Consensus 78 ~~~~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~ 157 (165)
+.+|+.++|+.||+|+.|.++.+.+|+|+++|++|++|+|+||+++. .+..++|||.|+|.|+|+++|+++++++
T Consensus 350 ~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~~-----~~~~~lpFG~G~r~C~G~~~A~~e~~~~ 424 (463)
T PLN02196 350 AVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVAP-----KPNTFMPFGNGTHSCPGNELAKLEISVL 424 (463)
T ss_pred eccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCCC-----CCCcccCcCCCCCCCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999632 3457999999999999999999999999
Q ss_pred HHhhhc
Q 037737 158 RVYTKS 163 (165)
Q Consensus 158 l~~~l~ 163 (165)
++.++.
T Consensus 425 la~ll~ 430 (463)
T PLN02196 425 IHHLTT 430 (463)
T ss_pred HHHHHH
Confidence 999985
No 28
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00 E-value=2.1e-43 Score=276.74 Aligned_cols=157 Identities=29% Similarity=0.491 Sum_probs=143.9
Q ss_pred cccccchhHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcCCC----CCCccccccChhHHHHHHhHhcCCCCCCCCccee
Q 037737 2 MFTGGTQTTATTVEWAMAELAKNPKLLKNAQEEVRRVVKNKS----SINMDDVDQMHYLKCVMKESLRLHPAGTISFPRE 77 (165)
Q Consensus 2 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~e~~~~~~~~~----~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~ 77 (165)
+++||+|||+.+++|++++|++||++|+|+++|++++.+... ..+.+++.++||++++|+|++|++|+++.. +|.
T Consensus 295 ~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~-~R~ 373 (490)
T PLN02302 295 YLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTV-FRE 373 (490)
T ss_pred HHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccc-hhc
Confidence 688999999999999999999999999999999999876421 267889999999999999999999999885 489
Q ss_pred ccCccccCCeEeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCcCCCCCccccccccCCCCCCccHHHHHHHHHHH
Q 037737 78 TSTRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDFIPFGTGRRFCPGMLFGKVAAEFA 157 (165)
Q Consensus 78 ~~~~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~ 157 (165)
+.+|++++|+.||+|+.|.++.+.+|+|+++|+||++|+|+||++.. ..+..++|||.|+|+|+|+++|.+|++++
T Consensus 374 ~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~~~~~----~~~~~~~pFG~G~r~C~G~~lA~~e~~~~ 449 (490)
T PLN02302 374 AKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRWDNYT----PKAGTFLPFGLGSRLCPGNDLAKLEISIF 449 (490)
T ss_pred ccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccChhhcCCCC----CCCCCccCCCCCCcCCCcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999643 23457999999999999999999999999
Q ss_pred HHhhhc
Q 037737 158 RVYTKS 163 (165)
Q Consensus 158 l~~~l~ 163 (165)
++.++.
T Consensus 450 la~ll~ 455 (490)
T PLN02302 450 LHHFLL 455 (490)
T ss_pred HHHHHh
Confidence 999885
No 29
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00 E-value=4.7e-43 Score=273.47 Aligned_cols=160 Identities=26% Similarity=0.395 Sum_probs=144.7
Q ss_pred cccccchhHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcC---CCCCCccccccChhHHHHHHhHhcCCCCCCCCcceec
Q 037737 2 MFTGGTQTTATTVEWAMAELAKNPKLLKNAQEEVRRVVKN---KSSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRET 78 (165)
Q Consensus 2 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~e~~~~~~~---~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~ 78 (165)
+++||+|||+.+++|++++|++||++++++++|++++.+. ....+.+++.++||++++++|++|++|+++.. +|.+
T Consensus 275 l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~-~R~~ 353 (472)
T PLN02987 275 LLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGI-FRRA 353 (472)
T ss_pred HHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCc-cccC
Confidence 5799999999999999999999999999999999998752 34567788999999999999999999999864 5999
Q ss_pred cCccccCCeEeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCcCCCCCccccccccCCCCCCccHHHHHHHHHHHH
Q 037737 79 STRVNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDFIPFGTGRRFCPGMLFGKVAAEFAR 158 (165)
Q Consensus 79 ~~~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l 158 (165)
.+|++++|+.||+|+.|.++.+.+|+|++.|++|++|+|+||+++... ...+..++|||+|+|.|+|+++|..|+++++
T Consensus 354 ~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~-~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l 432 (472)
T PLN02987 354 MTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGT-TVPSNVFTPFGGGPRLCPGYELARVALSVFL 432 (472)
T ss_pred CCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCC-CCCCcceECCCCCCcCCCcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999975432 2234579999999999999999999999999
Q ss_pred Hhhhc
Q 037737 159 VYTKS 163 (165)
Q Consensus 159 ~~~l~ 163 (165)
+.++.
T Consensus 433 a~ll~ 437 (472)
T PLN02987 433 HRLVT 437 (472)
T ss_pred HHHHh
Confidence 99985
No 30
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.2e-42 Score=258.19 Aligned_cols=163 Identities=28% Similarity=0.553 Sum_probs=149.0
Q ss_pred cccccchhHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcCCCC-CCccccccChhHHHHHHhHhcCCCCCCCCcceeccC
Q 037737 2 MFTGGTQTTATTVEWAMAELAKNPKLLKNAQEEVRRVVKNKSS-INMDDVDQMHYLKCVMKESLRLHPAGTISFPRETST 80 (165)
Q Consensus 2 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~e~~~~~~~~~~-~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~ 80 (165)
++|||..|++++..|++++|++|||+++.+++|+..++++... .+.+.++++|.|++||+|++||+||.+... |.+.+
T Consensus 281 ~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~~d~L~~lplL~~~IkEtLRL~~p~~~~~-R~v~~ 359 (486)
T KOG0684|consen 281 LLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLTYDQLKDLPLLDSCIKETLRLHPPAHSLM-RKVHE 359 (486)
T ss_pred HHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCCHHHHhcchHHHHHHHHHHhcCCchhhHH-Hhhcc
Confidence 4799999999999999999999999999999999999988665 899999999999999999999999887765 99999
Q ss_pred ccccCC----eEeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCcCCCC----CccccccccCCCCCCccHHHHHH
Q 037737 81 RVNLGG----YDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNG----QYFDFIPFGTGRRFCPGMLFGKV 152 (165)
Q Consensus 81 ~~~~~~----~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~~----~~~~~~~Fg~G~~~C~G~~~A~~ 152 (165)
|.++.+ |.||+|..|.+++..+|+||++|++|+.|+|+||++++++.+. -.+.+||||+|.|.|||+.||.+
T Consensus 360 D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~ 439 (486)
T KOG0684|consen 360 DLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYL 439 (486)
T ss_pred ceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCCCcccccccccccccccccCCCcCCCCchHHHHH
Confidence 999866 9999999999999999999999999999999999987765422 13457999999999999999999
Q ss_pred HHHHHHHhhhccC
Q 037737 153 AAEFARVYTKSFL 165 (165)
Q Consensus 153 ~~~~~l~~~l~~~ 165 (165)
++|.++..+|+++
T Consensus 440 eIk~~~~l~L~~f 452 (486)
T KOG0684|consen 440 EIKQFISLLLRHF 452 (486)
T ss_pred HHHHHHHHHHHHc
Confidence 9999999998753
No 31
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2e-39 Score=249.13 Aligned_cols=136 Identities=34% Similarity=0.586 Sum_probs=128.9
Q ss_pred cccccchhHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcCCCCCCccccccChhHHHHHHhHhcCCCCCCCCcceeccCc
Q 037737 2 MFTGGTQTTATTVEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRETSTR 81 (165)
Q Consensus 2 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~e~~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~~ 81 (165)
+++||+|||+++++|+++.|++||++++++++|.+. ||++++++|++|++|+++. .+|.+.+|
T Consensus 244 ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~E~LR~~ppv~~-~~R~~~~d 306 (411)
T COG2124 244 LLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVEETLRLYPPVPL-ARRVATED 306 (411)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHHHHHHhCCchhc-cceeccCC
Confidence 578999999999999999999999999999988654 7889999999999999999 66999999
Q ss_pred cccCCeEeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCcCCCCCccccccccCCCCCCccHHHHHHHHHHHHHhh
Q 037737 82 VNLGGYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDFIPFGTGRRFCPGMLFGKVAAEFARVYT 161 (165)
Q Consensus 82 ~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~~ 161 (165)
++++|+.||+|+.|.++.+.+||||+.|++|++|||+||. ..++|||+|+|.|+|.+||++|++++++.+
T Consensus 307 ~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~----------~~~l~FG~G~H~ClG~~lA~~E~~~~l~~l 376 (411)
T COG2124 307 VELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN----------NAHLPFGGGPHRCLGAALARLELKVALAEL 376 (411)
T ss_pred EeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC----------CCCcCCCCCCccccCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999997 368999999999999999999999999999
Q ss_pred hcc
Q 037737 162 KSF 164 (165)
Q Consensus 162 l~~ 164 (165)
+..
T Consensus 377 l~r 379 (411)
T COG2124 377 LRR 379 (411)
T ss_pred HHh
Confidence 864
No 32
>PLN02648 allene oxide synthase
Probab=100.00 E-value=3.3e-38 Score=245.91 Aligned_cols=156 Identities=21% Similarity=0.351 Sum_probs=134.8
Q ss_pred cccchhHHHHHHHHHHHHHhCHH-HHHHHHHHHHHhhcC-CCCCCccccccChhHHHHHHhHhcCCCCCCCCcceeccCc
Q 037737 4 TGGTQTTATTVEWAMAELAKNPK-LLKNAQEEVRRVVKN-KSSINMDDVDQMHYLKCVMKESLRLHPAGTISFPRETSTR 81 (165)
Q Consensus 4 ~ag~~tt~~~l~~~~~~l~~~p~-~~~~l~~e~~~~~~~-~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~~ 81 (165)
+++++|++.+++|++++|++||+ +++++++|++.+++. ...++.+++.++||++++++|++|++|+++... |.+.+|
T Consensus 282 ~~t~~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~-r~a~~d 360 (480)
T PLN02648 282 FNAFGGFKIFFPALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQY-GRARED 360 (480)
T ss_pred HHhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCccccc-ceecCC
Confidence 34577777899999999999995 999999999999863 346788899999999999999999999999876 778899
Q ss_pred cccC----CeEeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCcCCCCCccccccc---------cCCCCCCccHH
Q 037737 82 VNLG----GYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTIDFNGQYFDFIPF---------GTGRRFCPGML 148 (165)
Q Consensus 82 ~~~~----~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~~~~~~~~~F---------g~G~~~C~G~~ 148 (165)
++++ ||.||+|+.|.++.+.+|+|+++|+||++|+|+||++++.. ....+++| |+|+|.|+|++
T Consensus 361 ~~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~---~~~~~~~f~~g~~~~~~G~G~R~C~G~~ 437 (480)
T PLN02648 361 FVIESHDAAFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGE---KLLKYVFWSNGRETESPTVGNKQCAGKD 437 (480)
T ss_pred EEEecCCceEEECCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCcc---ccccccccCCCcccCCCCCCCccCccHH
Confidence 9995 79999999999999999999999999999999999865322 11234444 67789999999
Q ss_pred HHHHHHHHHHHhhhc
Q 037737 149 FGKVAAEFARVYTKS 163 (165)
Q Consensus 149 ~A~~~~~~~l~~~l~ 163 (165)
||++|++++++.++.
T Consensus 438 ~A~~e~~~~la~Ll~ 452 (480)
T PLN02648 438 FVVLVARLFVAELFL 452 (480)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999874
No 33
>PF08492 SRP72: SRP72 RNA-binding domain; InterPro: IPR013699 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=65.99 E-value=5 Score=22.32 Aligned_cols=7 Identities=43% Similarity=0.828 Sum_probs=5.5
Q ss_pred CCCCCCC
Q 037737 116 LPERFIN 122 (165)
Q Consensus 116 ~p~Rfl~ 122 (165)
||||||.
T Consensus 44 DPERWLP 50 (59)
T PF08492_consen 44 DPERWLP 50 (59)
T ss_pred CccccCc
Confidence 7888885
No 34
>PF05952 ComX: Bacillus competence pheromone ComX; InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible. DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=60.42 E-value=12 Score=20.67 Aligned_cols=19 Identities=26% Similarity=0.398 Sum_probs=16.1
Q ss_pred HHHHHHHhCHHHHHHHHHH
Q 037737 16 WAMAELAKNPKLLKNAQEE 34 (165)
Q Consensus 16 ~~~~~l~~~p~~~~~l~~e 34 (165)
-++.+|.+||++.+++.+.
T Consensus 4 ~iV~YLv~nPevl~kl~~g 22 (57)
T PF05952_consen 4 EIVNYLVQNPEVLEKLKEG 22 (57)
T ss_pred HHHHHHHHChHHHHHHHcC
Confidence 4678999999999999863
No 35
>COG1759 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-monophosphate synthetase (purine biosynthesis) [Nucleotide transport and metabolism]
Probab=55.99 E-value=29 Score=26.53 Aligned_cols=27 Identities=11% Similarity=0.139 Sum_probs=20.0
Q ss_pred CccccccccCCCCCCccHHHHHHHHHHHHH
Q 037737 130 QYFDFIPFGTGRRFCPGMLFGKVAAEFARV 159 (165)
Q Consensus 130 ~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~ 159 (165)
++++++-||-+ +-.|+.+|. |+|.++-
T Consensus 326 spYs~l~~~~p--ms~GrRIA~-EIk~A~e 352 (361)
T COG1759 326 SPYSNLYWGEP--MSTGRRIAR-EIKEAIE 352 (361)
T ss_pred CcchhhhcCCC--cchhhHHHH-HHHHHHH
Confidence 45667777654 679999998 8887753
No 36
>PRK06789 flagellar motor switch protein; Validated
Probab=49.81 E-value=19 Score=21.00 Aligned_cols=40 Identities=15% Similarity=0.191 Sum_probs=31.2
Q ss_pred HHHhHhcCCCCCCCCcceeccCc--cccCCeEeCCCCEEEEe
Q 037737 59 VMKESLRLHPAGTISFPRETSTR--VNLGGYDIPAKTIVYMN 98 (165)
Q Consensus 59 ~i~E~lRl~~~~~~~~~r~~~~~--~~~~~~~ip~g~~v~~~ 98 (165)
-++|.+.+.+.....+-+.+.++ +.++|..|.+|..|.++
T Consensus 21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~ 62 (74)
T PRK06789 21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN 62 (74)
T ss_pred EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence 46788899888877776777775 44589999999988764
No 37
>PF11138 DUF2911: Protein of unknown function (DUF2911); InterPro: IPR021314 This bacterial family of proteins has no known function.
Probab=48.65 E-value=26 Score=23.39 Aligned_cols=43 Identities=21% Similarity=0.373 Sum_probs=28.9
Q ss_pred eeccCccccCCeEeCCCCEEEEehh-------hhccCCCCCCCCCCCCCCC
Q 037737 76 RETSTRVNLGGYDIPAKTIVYMNVW-------AIQRDPKVWDRAEVFLPER 119 (165)
Q Consensus 76 r~~~~~~~~~~~~ip~g~~v~~~~~-------~~~~d~~~~~~p~~f~p~R 119 (165)
-...+|+.++|..||+|+.-++... .+|++...|.. ..++|+.
T Consensus 50 i~f~~dv~igGk~l~AG~Ysl~tiP~~~~WtvI~n~~~~~wG~-~~Y~~~~ 99 (145)
T PF11138_consen 50 ITFSKDVTIGGKKLKAGTYSLFTIPGEDEWTVIFNKDTDQWGA-YNYDPSK 99 (145)
T ss_pred EEECCCeEECCEEcCCeeEEEEEecCCCeEEEEEECCCCccCc-cccCchh
Confidence 3456789999999999997665432 34666667754 4455444
No 38
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=48.48 E-value=8.3 Score=20.96 Aligned_cols=11 Identities=45% Similarity=0.893 Sum_probs=8.9
Q ss_pred ccccCCCCCCc
Q 037737 135 IPFGTGRRFCP 145 (165)
Q Consensus 135 ~~Fg~G~~~C~ 145 (165)
-+||-|.|.|-
T Consensus 12 ~kfg~GsrsC~ 22 (56)
T KOG3506|consen 12 RKFGQGSRSCR 22 (56)
T ss_pred cccCCCCccee
Confidence 47999999983
No 39
>PF12508 DUF3714: Protein of unknown function (DUF3714) ; InterPro: IPR022187 Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=46.84 E-value=19 Score=25.38 Aligned_cols=42 Identities=17% Similarity=0.335 Sum_probs=28.9
Q ss_pred ChhHHHHHHhHhcCCCCCCCCcceeccCccccCCeEeCCCCEEE
Q 037737 53 MHYLKCVMKESLRLHPAGTISFPRETSTRVNLGGYDIPAKTIVY 96 (165)
Q Consensus 53 ~~~l~~~i~E~lRl~~~~~~~~~r~~~~~~~~~~~~ip~g~~v~ 96 (165)
-....|||.|........-.. -...+|+.++|..||+|+.+.
T Consensus 52 ~n~I~A~V~~~qtv~~Gs~vr--lRLle~i~i~g~~IPkgt~l~ 93 (200)
T PF12508_consen 52 KNTIRAVVDGTQTVVDGSRVR--LRLLEDIQIGGILIPKGTYLY 93 (200)
T ss_pred CCeEEEEEecceEEeCCCEEE--EEEcCceEECCEEeCCCCEEE
Confidence 344568888887665443322 234577999999999999664
No 40
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=43.94 E-value=27 Score=21.12 Aligned_cols=18 Identities=22% Similarity=0.477 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHhhcCC
Q 037737 25 PKLLKNAQEEVRRVVKNK 42 (165)
Q Consensus 25 p~~~~~l~~e~~~~~~~~ 42 (165)
|++...+++||-+++.+.
T Consensus 36 pd~l~~Lr~eIl~VI~KY 53 (88)
T COG0851 36 PDYLEQLRKEILEVISKY 53 (88)
T ss_pred cchHHHHHHHHHHHHHHH
Confidence 788899999998887653
No 41
>PF10796 Anti-adapt_IraP: Sigma-S stabilisation anti-adaptor protein ; InterPro: IPR019732 This entry is conserved in Enterobacteriaceae. It is one of a series of proteins, expressed by these bacteria in response to stress, that help to regulate Sigma-S, the stationary phase sigma factor of Escherichia coli and Salmonella. IraP is essential for Sigma-S stabilisation in some but not all starvation conditions []. ; GO: 0005737 cytoplasm
Probab=37.64 E-value=94 Score=18.79 Aligned_cols=60 Identities=12% Similarity=0.122 Sum_probs=33.7
Q ss_pred ccchhHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcCCCCCCccccc-cChhHHHHHHhHhcC
Q 037737 5 GGTQTTATTVEWAMAELAKNPKLLKNAQEEVRRVVKNKSSINMDDVD-QMHYLKCVMKESLRL 66 (165)
Q Consensus 5 ag~~tt~~~l~~~~~~l~~~p~~~~~l~~e~~~~~~~~~~~~~~~~~-~~~~l~~~i~E~lRl 66 (165)
|-+|+-...++..+..+ .++-++.+.+-|+.++............ +...|...+++-++.
T Consensus 24 AqVEAleivitALL~~l--~~~~~~~~i~~I~~Ai~~a~~~~~~~~~sd~eLL~~~~~~Ll~~ 84 (87)
T PF10796_consen 24 AQVEALEIVITALLRTL--DQGGRQEMIESIEKAIEDASPSSDVPLKSDAELLLQYVKKLLRH 84 (87)
T ss_pred HHHHHHHHHHHHHHHHh--CcchHHHHHHHHHHHHHHhcccCCccchHHHHHHHHHHHHHHhc
Confidence 33455555555555555 5566677777777776554332222222 455667777777664
No 42
>PF14550 Peptidase_U35_2: Putative phage protease XkdF
Probab=32.35 E-value=41 Score=21.75 Aligned_cols=20 Identities=30% Similarity=0.434 Sum_probs=16.2
Q ss_pred ccCccccCCeEeCCCCEEEE
Q 037737 78 TSTRVNLGGYDIPAKTIVYM 97 (165)
Q Consensus 78 ~~~~~~~~~~~ip~g~~v~~ 97 (165)
...|.+++|..||+|+.+..
T Consensus 73 ~~~d~~~~g~~i~~GtWv~~ 92 (122)
T PF14550_consen 73 APEDMEIGGETIPKGTWVVG 92 (122)
T ss_pred cCCCcccCCeeecceEEEEE
Confidence 44578889999999998843
No 43
>PF08285 DPM3: Dolichol-phosphate mannosyltransferase subunit 3 (DPM3); InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=32.20 E-value=79 Score=19.26 Aligned_cols=26 Identities=19% Similarity=0.403 Sum_probs=18.5
Q ss_pred HHHHHHHHHhCHHHHHHHHHHHHHhh
Q 037737 14 VEWAMAELAKNPKLLKNAQEEVRRVV 39 (165)
Q Consensus 14 l~~~~~~l~~~p~~~~~l~~e~~~~~ 39 (165)
+.|.+...-..||..+.|.+||+++.
T Consensus 56 lgy~v~tFnDcpeA~~eL~~eI~eAK 81 (91)
T PF08285_consen 56 LGYGVATFNDCPEAAKELQKEIKEAK 81 (91)
T ss_pred HHHhhhccCCCHHHHHHHHHHHHHHH
Confidence 34444445567899999999998873
No 44
>PRK00394 transcription factor; Reviewed
Probab=32.17 E-value=15 Score=25.42 Aligned_cols=34 Identities=21% Similarity=0.462 Sum_probs=22.9
Q ss_pred CCCCCCCCCCCCcCCCCCccccccccCCCCCCcc
Q 037737 113 EVFLPERFINSTIDFNGQYFDFIPFGTGRRFCPG 146 (165)
Q Consensus 113 ~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~~~C~G 146 (165)
.+|+|+||-.---....++...+-|..|+=.|.|
T Consensus 28 ~eYePe~fpgli~Rl~~Pk~t~lIf~sGKiv~tG 61 (179)
T PRK00394 28 AEYNPEQFPGLVYRLEDPKIAALIFRSGKVVCTG 61 (179)
T ss_pred ceeCcccCceEEEEecCCceEEEEEcCCcEEEEc
Confidence 4788888753211122234578999999999998
No 45
>cd04518 TBP_archaea archaeal TATA box binding protein (TBP): TBPs are transcription factors present in archaea and eukaryotes, that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA.
Probab=31.96 E-value=11 Score=25.91 Aligned_cols=35 Identities=17% Similarity=0.436 Sum_probs=23.6
Q ss_pred CCCCCCCCCCCCcCCCCCccccccccCCCCCCccH
Q 037737 113 EVFLPERFINSTIDFNGQYFDFIPFGTGRRFCPGM 147 (165)
Q Consensus 113 ~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~~~C~G~ 147 (165)
.+|+|+||-.---....++...+-|+.|+=.|.|.
T Consensus 29 ~eY~P~~fpgli~Rl~~Pk~t~lIF~SGKiv~tGa 63 (174)
T cd04518 29 AEYNPDQFPGLVYRLEDPKIAALIFRSGKMVCTGA 63 (174)
T ss_pred cEECCCcCcEEEEEccCCcEEEEEECCCeEEEEcc
Confidence 47888888532111222445789999999999985
No 46
>PF07886 BA14K: BA14K-like protein; InterPro: IPR012413 The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus (Q44701 from SWISSPROT) and by Brucella suis (Q8FVU0 from SWISSPROT). BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process [].
Probab=31.12 E-value=46 Score=15.82 Aligned_cols=16 Identities=31% Similarity=0.748 Sum_probs=12.2
Q ss_pred CccccccccCCCCCCc
Q 037737 130 QYFDFIPFGTGRRFCP 145 (165)
Q Consensus 130 ~~~~~~~Fg~G~~~C~ 145 (165)
....|+++++..|.|.
T Consensus 16 ~~~Ty~~~~G~r~~C~ 31 (31)
T PF07886_consen 16 RDNTYQPYDGPRRFCR 31 (31)
T ss_pred CCCcEeCCCCccccCc
Confidence 3447899998888884
No 47
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=29.89 E-value=16 Score=25.15 Aligned_cols=35 Identities=20% Similarity=0.403 Sum_probs=23.1
Q ss_pred CCCCCCCCCCCCcCCCCCccccccccCCCCCCccH
Q 037737 113 EVFLPERFINSTIDFNGQYFDFIPFGTGRRFCPGM 147 (165)
Q Consensus 113 ~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~~~C~G~ 147 (165)
.+|+|++|-.-=-....++...+-|..|+-.|-|.
T Consensus 35 aeYnP~qFpGlv~Rl~ePk~a~LIF~SGK~VcTGa 69 (185)
T COG2101 35 AEYNPEQFPGLVYRLEEPKTAALIFRSGKVVCTGA 69 (185)
T ss_pred CccCHhHCCeeEEEecCCcceEEEEecCcEEEecc
Confidence 46888888421111122445789999999999994
No 48
>PF14824 Sirohm_synth_M: Sirohaem biosynthesis protein central; PDB: 1KYQ_B.
Probab=29.16 E-value=74 Score=15.02 Aligned_cols=15 Identities=27% Similarity=0.649 Sum_probs=10.7
Q ss_pred CHHHHHHHHHHHHHh
Q 037737 24 NPKLLKNAQEEVRRV 38 (165)
Q Consensus 24 ~p~~~~~l~~e~~~~ 38 (165)
.|.+..++|+|++..
T Consensus 15 sP~la~~iR~~ie~~ 29 (30)
T PF14824_consen 15 SPRLARLIRKEIERL 29 (30)
T ss_dssp -HHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHh
Confidence 477778888888754
No 49
>PRK13989 cell division topological specificity factor MinE; Provisional
Probab=28.96 E-value=55 Score=19.59 Aligned_cols=19 Identities=26% Similarity=0.371 Sum_probs=14.0
Q ss_pred CHHHHHHHHHHHHHhhcCC
Q 037737 24 NPKLLKNAQEEVRRVVKNK 42 (165)
Q Consensus 24 ~p~~~~~l~~e~~~~~~~~ 42 (165)
.|+..+++++|+-+++.+.
T Consensus 36 ~p~~l~~lk~dil~VIsKY 54 (84)
T PRK13989 36 PPDYLPALQKELVAVISKY 54 (84)
T ss_pred CHHHHHHHHHHHHHHHHHh
Confidence 3778888888887776543
No 50
>PF11227 DUF3025: Protein of unknown function (DUF3025); InterPro: IPR021390 Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function.
Probab=28.38 E-value=37 Score=24.22 Aligned_cols=25 Identities=32% Similarity=0.650 Sum_probs=19.7
Q ss_pred EEEehhhh-ccCCCCCCCCCCCCCCC
Q 037737 95 VYMNVWAI-QRDPKVWDRAEVFLPER 119 (165)
Q Consensus 95 v~~~~~~~-~~d~~~~~~p~~f~p~R 119 (165)
..++-|.. |.|+..|.|...|+|.|
T Consensus 186 LGiPGW~~~n~~~~FY~d~~~FRp~R 211 (212)
T PF11227_consen 186 LGIPGWWPDNEDPAFYDDTDVFRPGR 211 (212)
T ss_pred cCCCCCCCCCCCcccccCccccCCCC
Confidence 33444544 88999999999999988
No 51
>PF13993 YccJ: YccJ-like protein
Probab=28.04 E-value=60 Score=18.16 Aligned_cols=31 Identities=29% Similarity=0.321 Sum_probs=22.1
Q ss_pred cccchhHHHHHHHHHHHHHhCHHHH-HHHHHH
Q 037737 4 TGGTQTTATTVEWAMAELAKNPKLL-KNAQEE 34 (165)
Q Consensus 4 ~ag~~tt~~~l~~~~~~l~~~p~~~-~~l~~e 34 (165)
||..-.|+.-++-.+++|+++.+.+ +++-+|
T Consensus 8 WA~~ReTS~EIAeAIFElA~~dE~lAekIWee 39 (69)
T PF13993_consen 8 WANVRETSIEIAEAIFELANNDEVLAEKIWEE 39 (69)
T ss_pred HHHHhcCCHHHHHHHHHHhcccHHHHHHHHHc
Confidence 3455567777888999999987744 556655
No 52
>PF10454 DUF2458: Protein of unknown function (DUF2458); InterPro: IPR018858 This entry represents a family of uncharacterised proteins.
Probab=28.03 E-value=1.5e+02 Score=19.94 Aligned_cols=27 Identities=22% Similarity=0.473 Sum_probs=21.6
Q ss_pred hHHHHHHHHHHHHHhCHHHHHHHHHHH
Q 037737 9 TTATTVEWAMAELAKNPKLLKNAQEEV 35 (165)
Q Consensus 9 tt~~~l~~~~~~l~~~p~~~~~l~~e~ 35 (165)
|-..++-.++..+++||+.+++|++=+
T Consensus 7 ~w~~ALryv~~~v~~n~~~~~~Ir~Li 33 (150)
T PF10454_consen 7 TWPAALRYVMKTVAQNPEFLQRIRRLI 33 (150)
T ss_pred cHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 456678889999999999998887533
No 53
>PF07849 DUF1641: Protein of unknown function (DUF1641); InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long.
Probab=27.85 E-value=92 Score=15.79 Aligned_cols=18 Identities=6% Similarity=0.279 Sum_probs=14.3
Q ss_pred HHHHHHHHhCHHHHHHHH
Q 037737 15 EWAMAELAKNPKLLKNAQ 32 (165)
Q Consensus 15 ~~~~~~l~~~p~~~~~l~ 32 (165)
.|.+.-++++||++.-+.
T Consensus 13 l~gl~~~l~DpdvqrgL~ 30 (42)
T PF07849_consen 13 LFGLLRALRDPDVQRGLG 30 (42)
T ss_pred HHHHHHHHcCHHHHHHHH
Confidence 456778899999988765
No 54
>PRK13990 cell division topological specificity factor MinE; Provisional
Probab=26.40 E-value=66 Score=19.59 Aligned_cols=18 Identities=33% Similarity=0.481 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHhhcCC
Q 037737 25 PKLLKNAQEEVRRVVKNK 42 (165)
Q Consensus 25 p~~~~~l~~e~~~~~~~~ 42 (165)
|++++++++|+-+++.+.
T Consensus 42 pd~L~~lk~eIl~VI~KY 59 (90)
T PRK13990 42 SHLLAELKDEIIEVVKKY 59 (90)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 577788888887776543
No 55
>TIGR01215 minE cell division topological specificity factor MinE. This protein is involved in the process of cell division. This protein prevents the proteins MinC and MinD to inhibit cell division at internal sites, but allows inhibiton at polar sites. This allows for correct cell division at the proper sites.
Probab=26.32 E-value=1.3e+02 Score=17.77 Aligned_cols=18 Identities=22% Similarity=0.527 Sum_probs=13.7
Q ss_pred CHHHHHHHHHHHHHhhcC
Q 037737 24 NPKLLKNAQEEVRRVVKN 41 (165)
Q Consensus 24 ~p~~~~~l~~e~~~~~~~ 41 (165)
.|+..+++++|+-+++.+
T Consensus 34 ~p~~l~~mk~dil~VIsk 51 (81)
T TIGR01215 34 APEYLEELRKEILEVISK 51 (81)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 478888888888777654
No 56
>PF14483 Cut8_M: Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=25.63 E-value=1e+02 Score=15.37 Aligned_cols=20 Identities=10% Similarity=0.393 Sum_probs=13.0
Q ss_pred HHHHHHHHH-hCHHHHHHHHH
Q 037737 14 VEWAMAELA-KNPKLLKNAQE 33 (165)
Q Consensus 14 l~~~~~~l~-~~p~~~~~l~~ 33 (165)
+..++..++ +||++++.++.
T Consensus 15 L~~lL~~l~~~HPei~~~i~~ 35 (38)
T PF14483_consen 15 LQSLLQSLCERHPEIQQEIRS 35 (38)
T ss_dssp HHHHHHHHHHHSTHHHHHHHT
T ss_pred HHHHHHHHHHhChhHHHHHHh
Confidence 444555555 89998877663
No 57
>PRK05933 type III secretion system protein; Validated
Probab=24.98 E-value=78 Score=24.31 Aligned_cols=43 Identities=19% Similarity=0.308 Sum_probs=32.4
Q ss_pred HHHHHHhHhcCCCCCCCCcceec-cC--ccccCCeEeCCCCEEEEe
Q 037737 56 LKCVMKESLRLHPAGTISFPRET-ST--RVNLGGYDIPAKTIVYMN 98 (165)
Q Consensus 56 l~~~i~E~lRl~~~~~~~~~r~~-~~--~~~~~~~~ip~g~~v~~~ 98 (165)
.+--|+|.++|.+.....+.+.. .+ |+.++|..|.+|..|.++
T Consensus 317 T~l~IkELL~L~~GSVIeLDk~a~GEpVDI~VNGrLIARGEVVVVd 362 (372)
T PRK05933 317 YSLSVGEFLKLGPGSILQFDGVHPTLGVDIILNGAKVGRGEIIALG 362 (372)
T ss_pred ccccHHHHhccCCCCEEEeCCcCCCCCEEEEECCEEEeeeeEEEEC
Confidence 34578999999988776664443 34 466699999999988775
No 58
>cd00652 TBP_TLF TATA box binding protein (TBP): Present in archaea and eukaryotes, TBPs are transcription factors that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA. New members of the TBP family, called TBP-like proteins (TBLP, TLF, TLP) or TBP-related factors (TRF1, TRF2,TRP), are similar to the core domain of TBPs, with identical or chemically similar amino acids at many
Probab=24.04 E-value=57 Score=22.42 Aligned_cols=34 Identities=18% Similarity=0.356 Sum_probs=22.4
Q ss_pred CCCCCCCCCCCCcCCCCCccccccccCCCCCCcc
Q 037737 113 EVFLPERFINSTIDFNGQYFDFIPFGTGRRFCPG 146 (165)
Q Consensus 113 ~~f~p~Rfl~~~~~~~~~~~~~~~Fg~G~~~C~G 146 (165)
-+|+|+||-.---....++...+-|+.|+=.|.|
T Consensus 29 ~~YePe~fpgli~R~~~P~~t~lIf~sGKivitG 62 (174)
T cd00652 29 AEYNPKRFPGVIMRLREPKTTALIFSSGKMVITG 62 (174)
T ss_pred cEECCCccceEEEEcCCCcEEEEEECCCEEEEEe
Confidence 4677777753111112244578999999999998
No 59
>PF14459 Prok-E2_C: Prokaryotic E2 family C
Probab=23.80 E-value=23 Score=22.35 Aligned_cols=20 Identities=30% Similarity=0.371 Sum_probs=15.1
Q ss_pred CCCccccccccCCCCCCccH
Q 037737 128 NGQYFDFIPFGTGRRFCPGM 147 (165)
Q Consensus 128 ~~~~~~~~~Fg~G~~~C~G~ 147 (165)
.+...+-+|||.|--.|+|.
T Consensus 101 vg~gss~~p~GaGaAaC~aA 120 (131)
T PF14459_consen 101 VGCGSSNNPFGAGAAACFAA 120 (131)
T ss_pred cccCcccCCcCccHHHHHHH
Confidence 33344679999999999874
No 60
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=23.74 E-value=89 Score=22.26 Aligned_cols=32 Identities=13% Similarity=0.078 Sum_probs=22.4
Q ss_pred cccccchhHHHHHHHHHHHHHhCHHHHHHHHH
Q 037737 2 MFTGGTQTTATTVEWAMAELAKNPKLLKNAQE 33 (165)
Q Consensus 2 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~ 33 (165)
|++|||..-+..+..++.+......+++||..
T Consensus 97 fILaGHSQGs~~l~~LL~e~~~~~pl~~rLVA 128 (207)
T PF11288_consen 97 FILAGHSQGSMHLLRLLKEEIAGDPLRKRLVA 128 (207)
T ss_pred EEEEEeChHHHHHHHHHHHHhcCchHHhhhhe
Confidence 68899999988887777665543336666653
No 61
>PRK13467 F0F1 ATP synthase subunit C; Provisional
Probab=23.04 E-value=1.6e+02 Score=16.77 Aligned_cols=22 Identities=9% Similarity=0.202 Sum_probs=17.1
Q ss_pred HHHHHHHHHHhCHHHHHHHHHH
Q 037737 13 TVEWAMAELAKNPKLLKNAQEE 34 (165)
Q Consensus 13 ~l~~~~~~l~~~p~~~~~l~~e 34 (165)
..+..+.-++++||...+++.-
T Consensus 22 v~~~a~e~iaRqPE~~~~i~~~ 43 (66)
T PRK13467 22 LMANLFKSAARQPEMIGQLRSL 43 (66)
T ss_pred HHHHHHHHHHcChhHHHhHHHH
Confidence 3445677889999999998864
No 62
>PRK13987 cell division topological specificity factor MinE; Provisional
Probab=22.89 E-value=88 Score=19.08 Aligned_cols=18 Identities=22% Similarity=0.589 Sum_probs=13.4
Q ss_pred CHHHHHHHHHHHHHhhcC
Q 037737 24 NPKLLKNAQEEVRRVVKN 41 (165)
Q Consensus 24 ~p~~~~~l~~e~~~~~~~ 41 (165)
.|+..+.+++|+-+++.+
T Consensus 33 sp~~l~~lk~eIl~VI~k 50 (91)
T PRK13987 33 SPDVLEMIKEDILKVISK 50 (91)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 378888888888777654
No 63
>PRK13991 cell division topological specificity factor MinE; Provisional
Probab=22.83 E-value=81 Score=19.05 Aligned_cols=18 Identities=17% Similarity=0.591 Sum_probs=14.1
Q ss_pred CHHHHHHHHHHHHHhhcC
Q 037737 24 NPKLLKNAQEEVRRVVKN 41 (165)
Q Consensus 24 ~p~~~~~l~~e~~~~~~~ 41 (165)
.|+..+++++|+-+++.+
T Consensus 35 ~p~~l~~lk~eil~VIsK 52 (87)
T PRK13991 35 TPEMMEQMKADLAEVIKR 52 (87)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 488889999888877654
No 64
>PF15300 INT_SG_DDX_CT_C: INTS6/SAGE1/DDX26B/CT45 C-terminus
Probab=22.37 E-value=46 Score=18.89 Aligned_cols=15 Identities=20% Similarity=0.591 Sum_probs=12.1
Q ss_pred ChhHHHHHHhHhcCC
Q 037737 53 MHYLKCVMKESLRLH 67 (165)
Q Consensus 53 ~~~l~~~i~E~lRl~ 67 (165)
..+++.+|+|++|+.
T Consensus 40 ~~fv~~~IkEA~RFk 54 (65)
T PF15300_consen 40 KQFVEMIIKEAARFK 54 (65)
T ss_pred HHHHHHHHHHHHHHH
Confidence 456889999999974
No 65
>COG1886 FliN Flagellar motor switch/type III secretory pathway protein [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=21.94 E-value=92 Score=20.46 Aligned_cols=41 Identities=20% Similarity=0.259 Sum_probs=30.6
Q ss_pred HHHHhHhcCCCCCCCCcceeccCcccc--CCeEeCCCCEEEEe
Q 037737 58 CVMKESLRLHPAGTISFPRETSTRVNL--GGYDIPAKTIVYMN 98 (165)
Q Consensus 58 ~~i~E~lRl~~~~~~~~~r~~~~~~~~--~~~~ip~g~~v~~~ 98 (165)
--++|.+++.......+.+.+..++.+ +|..|-+|..|.+.
T Consensus 84 ~~l~ell~l~~Gsvi~Ld~~~~~~VdI~vNg~~Ig~GEvVvvd 126 (136)
T COG1886 84 MPLGELLALGKGSVIELDKLAGEPVDILVNGRLIGRGEVVVVD 126 (136)
T ss_pred eeHHHHHhcCCCCEEEcCCcCCCceEEEECCEEEEEEeEEEEC
Confidence 357788888888777776666665444 89999999887764
No 66
>PTZ00218 40S ribosomal protein S29; Provisional
Probab=21.93 E-value=40 Score=18.36 Aligned_cols=10 Identities=40% Similarity=1.032 Sum_probs=8.0
Q ss_pred cccCCCCCCc
Q 037737 136 PFGTGRRFCP 145 (165)
Q Consensus 136 ~Fg~G~~~C~ 145 (165)
.||.|.|.|.
T Consensus 11 ~yGkGsr~C~ 20 (54)
T PTZ00218 11 TYGKGSRQCR 20 (54)
T ss_pred cCCCCCCeee
Confidence 5888999884
No 67
>COG3423 Nlp Predicted transcriptional regulator [Transcription]
Probab=21.67 E-value=40 Score=19.84 Aligned_cols=30 Identities=13% Similarity=0.315 Sum_probs=19.0
Q ss_pred EeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCc
Q 037737 88 DIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFINSTI 125 (165)
Q Consensus 88 ~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~ 125 (165)
..|+|..++...-.+ .|++.+|+||.+.+.
T Consensus 45 p~pkgEriIA~algv--------~P~eIWp~RY~d~~~ 74 (82)
T COG3423 45 PWPKGERIIADALGV--------PPEEIWPSRYADPQT 74 (82)
T ss_pred CCchHHHHHHHHhCC--------CHHHhCchhhccccc
Confidence 345665554433332 688999999987653
No 68
>PF01924 HypD: Hydrogenase formation hypA family; InterPro: IPR002780 HypD is involved in the hyp operon which is needed for the activity of the three hydrogenase isoenzymes in Escherichia coli. HypD is one of the genes needed for formation of these enzymes []. This protein has been found in Gram-negative and Gram-positive bacteria and Archaea. HypD contains many possible metal binding residues, which may bind to nickel. Transposon insertions into HypD resulted in Rhizobium leguminosarum mutants that lacked any hydrogenase activity in symbiosis with peas [].; GO: 0046872 metal ion binding; PDB: 2Z1D_A.
Probab=21.25 E-value=76 Score=24.59 Aligned_cols=21 Identities=29% Similarity=0.324 Sum_probs=15.9
Q ss_pred cccccchhHHHHHHHHHHHHH
Q 037737 2 MFTGGTQTTATTVEWAMAELA 22 (165)
Q Consensus 2 l~~ag~~tt~~~l~~~~~~l~ 22 (165)
|+..|.|||+++++.++..-.
T Consensus 130 F~avGFETTaP~~A~~i~~a~ 150 (355)
T PF01924_consen 130 FFAVGFETTAPATAAAILQAK 150 (355)
T ss_dssp EEEEE-HHHHHHHHHHHHHHH
T ss_pred EEEeCcccCcHHHHHHHHHHH
Confidence 456799999999998776655
No 69
>cd00250 CAS_like Clavaminic acid synthetase (CAS) -like; CAS is a trifunctional Fe(II)/ 2-oxoglutarate (2OG) oxygenase carrying out three reactions in the biosynthesis of clavulanic acid, an inhibitor of class A serine beta-lactamases. In general, Fe(II)-2OG oxygenases catalyze a hydroxylation reaction, which leads to the incorporation of an oxygen atom from dioxygen into a hydroxyl group and conversion of 2OG to succinate and CO2
Probab=21.22 E-value=1.2e+02 Score=21.96 Aligned_cols=34 Identities=3% Similarity=0.123 Sum_probs=25.7
Q ss_pred CeEeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCC
Q 037737 86 GYDIPAKTIVYMNVWAIQRDPKVWDRAEVFLPERFI 121 (165)
Q Consensus 86 ~~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl 121 (165)
.+.+.+|+.++++-+.+.|....|.+.. ...||+
T Consensus 221 ~~~l~~Gdivi~DN~r~lHgR~~f~~~~--~~~R~L 254 (262)
T cd00250 221 TVKLEPGDLLIFDNRRVLHGRTAFSPRY--GGDRWL 254 (262)
T ss_pred EEEcCCCCEEEEechhhhcCCCCCCCCC--CCceEE
Confidence 4788999999999999888777775432 345775
No 70
>PRK10174 hypothetical protein; Provisional
Probab=20.67 E-value=1.1e+02 Score=17.38 Aligned_cols=31 Identities=23% Similarity=0.180 Sum_probs=21.5
Q ss_pred cccchhHHHHHHHHHHHHHhCHHHH-HHHHHH
Q 037737 4 TGGTQTTATTVEWAMAELAKNPKLL-KNAQEE 34 (165)
Q Consensus 4 ~ag~~tt~~~l~~~~~~l~~~p~~~-~~l~~e 34 (165)
||..-.|+.-++-.+++++++.+.+ +++.+|
T Consensus 14 WA~vR~TS~EIAeAIFE~A~~dE~lAe~IWee 45 (75)
T PRK10174 14 WASLRNTSPEIAEAIFEVAGYDEKLAEKIWEE 45 (75)
T ss_pred HHHHhhCCHHHHHHHHHHhcccHHHHHHHHHh
Confidence 3455667777888899999887643 455554
No 71
>PF10264 Stork_head: Winged helix Storkhead-box1 domain; InterPro: IPR019391 In humans the Storkhead-box protein controls polyploidization of extravillus trophoblast and is implicated in pre-eclampsia []. This entry represents the conserved N-terminal winged-helix domain, which is likely to bind DNA.
Probab=20.46 E-value=2.1e+02 Score=17.06 Aligned_cols=38 Identities=13% Similarity=0.317 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHhC--HHHHHHHHHHHHHhhcCCCCCCcc
Q 037737 11 ATTVEWAMAELAKN--PKLLKNAQEEVRRVVKNKSSINMD 48 (165)
Q Consensus 11 ~~~l~~~~~~l~~~--p~~~~~l~~e~~~~~~~~~~~~~~ 48 (165)
.-++.|++..|-.. +..++.|++.+.+...+-..++.+
T Consensus 13 ~EvlC~~I~dln~~~~~at~E~l~~~L~~~yp~i~~Ps~e 52 (80)
T PF10264_consen 13 PEVLCWVISDLNAAGQPATQETLREHLRKHYPGIAIPSQE 52 (80)
T ss_pred HHHHHHHHHHHhccCCcchHHHHHHHHHHhCCCCCCCCHH
Confidence 45677888877753 667888888888877665444443
No 72
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=20.17 E-value=93 Score=24.72 Aligned_cols=17 Identities=29% Similarity=0.602 Sum_probs=13.8
Q ss_pred CccccCCeEeCCCCEEE
Q 037737 80 TRVNLGGYDIPAKTIVY 96 (165)
Q Consensus 80 ~~~~~~~~~ip~g~~v~ 96 (165)
+|+.++|..||+|+.+.
T Consensus 280 e~~~v~~~~ipkgt~l~ 296 (410)
T TIGR03779 280 EPIQAGDLVIPKGTVLY 296 (410)
T ss_pred CceeeCCEEecCCCEEE
Confidence 56777899999999664
No 73
>PRK13988 cell division topological specificity factor MinE; Provisional
Probab=20.06 E-value=99 Score=19.12 Aligned_cols=18 Identities=33% Similarity=0.615 Sum_probs=12.6
Q ss_pred CHHHHHHHHHHHHHhhcC
Q 037737 24 NPKLLKNAQEEVRRVVKN 41 (165)
Q Consensus 24 ~p~~~~~l~~e~~~~~~~ 41 (165)
.|+..+++++|+-+++.+
T Consensus 37 sp~~l~~mk~dIl~VIsk 54 (97)
T PRK13988 37 SPELLEQMRKEILEVVAR 54 (97)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 377777888877776554
Done!