BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037741
(353 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94F30|ESD4_ARATH Ubiquitin-like-specific protease ESD4 OS=Arabidopsis thaliana
GN=ESD4 PE=1 SV=1
Length = 489
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 115/264 (43%), Gaps = 40/264 (15%)
Query: 104 RPQIMEHAIDMNTSVDVNPLRGLEDSSLFDEFDRWFTGDSRVRRRVQHPRSFF----QII 159
RP+ +E +++ + PL E++ ++ R F+G +R + H S +++
Sbjct: 241 RPKTVEKRVEVPREPFI-PLTEDEEAEVY----RAFSGRNRRKVLATHENSNIDITGEVL 295
Query: 160 LGTASMGWLGDEHIHEYLRLISEKQQQYPNALLQHVTHTDTFFWLSL------------- 206
WL DE I+ YL L+ E++ + P L+ + +TFF+ L
Sbjct: 296 QCLTPSAWLNDEVINVYLELLKERETREPKKYLK-CHYFNTFFYKKLVSDSGYNFKAVRR 354
Query: 207 WVTAHNVK-IMTDVDMLLIPVNLDGSHWVLARVDFRKNKVWIYDSLLTFCDDKRYKLKFK 265
W T + + D DM+ +P++ G HW LA ++ R++K+ DSL
Sbjct: 355 WTTQRKLGYALIDCDMIFVPIHR-GVHWTLAVINNRESKLLYLDSLNGVD---------- 403
Query: 266 SLKVIFPRWLEYVGFYNIRPELRS--EYPWKVIAVKSAPQQEPGTGDCGVFVLMVTMYLM 323
+I +Y+G + W + V+ PQQ+ G DCG+F+L +
Sbjct: 404 --PMILNALAKYMGDEANEKSGKKIDANSWDMEFVEDLPQQKNGY-DCGMFMLKYIDFFS 460
Query: 324 FGLRFEFNASHVEYFRKKITVDIF 347
GL F+ H+ YFR + +I
Sbjct: 461 RGLGLCFSQEHMPYFRLRTAKEIL 484
>sp|Q5RBB1|SENP1_PONAB Sentrin-specific protease 1 OS=Pongo abelii GN=SENP1 PE=2 SV=1
Length = 645
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 96/197 (48%), Gaps = 24/197 (12%)
Query: 165 MGWLGDEHIHEYLRLISEKQQQYPNALLQHVTHTDTFFWLSLWVTAHN-VKIMT------ 217
+ WL DE I+ Y+ ++ E+ ++ L V +TFF+ L + VK T
Sbjct: 464 LNWLNDEIINFYMNMLMERSKEKG---LPSVHAFNTFFFTKLKTAGYQAVKRWTKKVDVF 520
Query: 218 DVDMLLIPVNLDGSHWVLARVDFRKNKVWIYDSLLTFCDDKRYKLKFKSLKVIFPRWLEY 277
VD+LL+P++L G HW LA VDFRK + YDS+ ++ + +++ ++L+
Sbjct: 521 SVDILLVPIHL-GVHWCLAVVDFRKKNITYYDSMGGINNE--------ACRILL-QYLKQ 570
Query: 278 VGFYNIRPELRSEYPWKVIAVKSA--PQQEPGTGDCGVFVLMVTMYLMFGLRFEFNASHV 335
R E + W++ + KS PQQ G+ DCG+F + F H+
Sbjct: 571 ESIDKKRKEFDTN-GWQLFSKKSQEIPQQMNGS-DCGMFACKYADCITKDRPINFTQQHM 628
Query: 336 EYFRKKITVDIFNDDII 352
YFRK++ +I + ++
Sbjct: 629 PYFRKRMVWEILHRKLL 645
>sp|Q9P0U3|SENP1_HUMAN Sentrin-specific protease 1 OS=Homo sapiens GN=SENP1 PE=1 SV=2
Length = 644
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 96/197 (48%), Gaps = 24/197 (12%)
Query: 165 MGWLGDEHIHEYLRLISEKQQQYPNALLQHVTHTDTFFWLSLWVTAHN-VKIMT------ 217
+ WL DE I+ Y+ ++ E+ ++ L V +TFF+ L + VK T
Sbjct: 463 LNWLNDEIINFYMNMLMERSKEKG---LPSVHAFNTFFFTKLKTAGYQAVKRWTKKVDVF 519
Query: 218 DVDMLLIPVNLDGSHWVLARVDFRKNKVWIYDSLLTFCDDKRYKLKFKSLKVIFPRWLEY 277
VD+LL+P++L G HW LA VDFRK + YDS+ ++ + +++ ++L+
Sbjct: 520 SVDILLVPIHL-GVHWCLAVVDFRKKNITYYDSMGGINNE--------ACRILL-QYLKQ 569
Query: 278 VGFYNIRPELRSEYPWKVIAVKSA--PQQEPGTGDCGVFVLMVTMYLMFGLRFEFNASHV 335
R E + W++ + KS PQQ G+ DCG+F + F H+
Sbjct: 570 ESIDKKRKEFDTN-GWQLFSKKSQEIPQQMNGS-DCGMFACKYADCITKDRPINFTQQHM 627
Query: 336 EYFRKKITVDIFNDDII 352
YFRK++ +I + ++
Sbjct: 628 PYFRKRMVWEILHRKLL 644
>sp|P59110|SENP1_MOUSE Sentrin-specific protease 1 OS=Mus musculus GN=Senp1 PE=2 SV=1
Length = 640
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 98/199 (49%), Gaps = 28/199 (14%)
Query: 165 MGWLGDEHIHEYLRLISE--KQQQYPNALLQHVTHTDTFFWLSLWVTAHN-VKIMT---- 217
+ WL DE I+ Y+ ++ E K++ +P+ V +TFF+ L + VK T
Sbjct: 459 LNWLNDEIINFYMNMLMERSKEKGFPS-----VHAFNTFFFTKLKTAGYQAVKRWTKKVD 513
Query: 218 --DVDMLLIPVNLDGSHWVLARVDFRKNKVWIYDSLLTFCDDKRYKLKFKSLKVIFPRWL 275
VD+LL+P++L G HW LA VDFR+ + YDS+ ++ + +++ ++L
Sbjct: 514 VFSVDILLVPIHL-GVHWCLAVVDFRRKSITYYDSMGGINNE--------ACRILL-QYL 563
Query: 276 EYVGFYNIRPELRSEYPWKVIAVKSA--PQQEPGTGDCGVFVLMVTMYLMFGLRFEFNAS 333
+ R E + W++ + KS PQQ G+ DCG+F + F
Sbjct: 564 KQESVDKKRKEFDTNG-WQLFSKKSQEIPQQMNGS-DCGMFACKYADCITKDRPINFTQQ 621
Query: 334 HVEYFRKKITVDIFNDDII 352
H+ YFRK++ +I + ++
Sbjct: 622 HMPYFRKRMVWEILHRKLL 640
>sp|Q09353|SENP_CAEEL Sentrin-specific protease OS=Caenorhabditis elegans GN=ulp-1 PE=2
SV=3
Length = 697
Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 94/202 (46%), Gaps = 31/202 (15%)
Query: 163 ASMGWLGDEHIHEYLRLISEKQQ---QYPNALLQHVTHTDTFFWLSLWVTAH-NVKIMT- 217
+ + WL DE I+ YL+LI ++ +YP + +TFF+ ++ + +VK T
Sbjct: 512 SGLHWLNDEIINFYLQLICDRSNGDSKYP-----KIYAFNTFFYSNIVSKGYASVKRWTR 566
Query: 218 --DV---DMLLIPVNLDGSHWVLARVDFRKNKVWIYDSLLTFCDDKRYKLKFKSLKVIFP 272
D+ D++L+PV+L G HW +A +D + K+ YDSL + + P
Sbjct: 567 KVDIFAFDIVLVPVHL-GMHWCMAVIDMGEKKIEFYDSL------------YDGNTAVLP 613
Query: 273 RWLEYVGFYNIRPELRSE--YPWKVIAVKSAPQQEPGTGDCGVFVLMVTMYLMFGLRFEF 330
Y+ ++ + + W + + P+Q+ G+ DCGVF + F
Sbjct: 614 ALRGYLEAESLDKKKTAMNFSGWTIQQMTDIPRQQNGS-DCGVFSCQFGEWASRRTTPRF 672
Query: 331 NASHVEYFRKKITVDIFNDDII 352
++ Y+RK++ +I + ++
Sbjct: 673 TQKNMPYYRKRMVYEIVSKKLL 694
>sp|O65278|ULP1B_ARATH Putative ubiquitin-like-specific protease 1B OS=Arabidopsis
thaliana GN=ULP1B PE=5 SV=2
Length = 341
Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 85/198 (42%), Gaps = 32/198 (16%)
Query: 167 WLGDEHIHEYLRLISEKQQQYPNALLQHVTHTDTFFWLSL-------------WVTAHNV 213
WL D+ + YL L+ E+Q + P + +TFF++ L W T +
Sbjct: 154 WLNDDVTNLYLELLKERQTRDPQKYFK-CHFFNTFFYVKLVSGSGYNYKAVSRWTTKRKL 212
Query: 214 KI-MTDVDMLLIPVNLDGSHWVLARVDFRKNKVWIYDSLLTFCDDKRYKLKFKSLKVIFP 272
+ D D++ +P+++D HW L ++ R+ K DSL T I
Sbjct: 213 GYDLIDCDIIFVPIHID-IHWTLGVINNRERKFVYLDSLFTGVGH-----------TILN 260
Query: 273 RWLEYVGFYNIRPELRSEY---PWKVIAVKSAPQQEPGTGDCGVFVLMVTMYLMFGLRFE 329
+Y+ ++ + + W + V+ PQQ+ G DCG+F+L + GL +
Sbjct: 261 AMAKYL-VDEVKQKSQKNIDVSSWGMEYVEERPQQQNGY-DCGMFMLKYIDFYSRGLSLQ 318
Query: 330 FNASHVEYFRKKITVDIF 347
F+ + YFR + +I
Sbjct: 319 FSQKDMPYFRLRTAKEIL 336
>sp|O42957|ULP1_SCHPO Ubiquitin-like-specific protease 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ulp1 PE=3 SV=1
Length = 568
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 86/195 (44%), Gaps = 29/195 (14%)
Query: 167 WLGDEHIHEYLRLISEKQQQYPNALLQHVTHTDTFFWLSL----------WVTAHNVKIM 216
WL DE I+ Y+ LISE+ + ++ L V +TFF+ SL W V I
Sbjct: 392 WLNDEVINFYMNLISERSKI--DSSLPRVHGFNTFFYTSLQRRGYAGVRRWAKKARVNI- 448
Query: 217 TDVDMLLIPVNLDGSHWVLARVDFRKNKVWIYDSLLTFCDDKRYKLKFKSLKVIFPRWLE 276
D+D + IPV+LD HW +A ++ K + +DSL K + L L+ + E
Sbjct: 449 ADMDAVFIPVHLD-VHWCMAVINKSKKRFEYWDSLAG-SPGKVFDL----LRDYY--IAE 500
Query: 277 YVGFYNIRPELRSEYPWKVIAVKSAPQQEPGTGDCGVFVLMVTMYLMFGLRFEFNASHVE 336
G ++ W+ ++P+Q G DCGVF + + +F+ + +
Sbjct: 501 TKGAVDV-------SDWENFMDDNSPRQRNG-HDCGVFACKTAECVSRNVPVQFSQNDMP 552
Query: 337 YFRKKITVDIFNDDI 351
R K+ I + I
Sbjct: 553 ELRIKMAASIIDAQI 567
>sp|Q8GYL3|ULP1A_ARATH Ubiquitin-like-specific protease 1A OS=Arabidopsis thaliana
GN=ULP1A PE=2 SV=2
Length = 502
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 42/203 (20%)
Query: 167 WLGDEHIHEYLRLISEKQQQYPNALLQHVTHTDTFFWLSL--------------WVTAHN 212
WL DE I+ Y+ L+ E++ + P L+ +TFF+ L W +
Sbjct: 315 WLNDEVINLYMVLLKEREAREPKKFLK-CHFFNTFFFTKLVNSATGYNYGAVRRWTSMKR 373
Query: 213 VKI-MTDVDMLLIPVNLDGSHWVLARVDFRKNKVWIYDSLLTFCDDKRYKLKFKSLKVIF 271
+ + D D + IP++++ HW LA ++ + K DS FK +
Sbjct: 374 LGYHLKDCDKIFIPIHMN-IHWTLAVINIKDQKFQYLDS-------------FKGRE--- 416
Query: 272 PRWLEYVGFYNIRPELRSEYP-------WKVIAVKSAPQQEPGTGDCGVFVLMVTMYLMF 324
P+ L+ + Y + E+R + W+ V+ P Q G DCG+F++ +
Sbjct: 417 PKILDALARYFV-DEVRDKSEVDLDVSRWRQEFVQDLPMQRNGF-DCGMFMVKYIDFYSR 474
Query: 325 GLRFEFNASHVEYFRKKITVDIF 347
GL F + YFR + +I
Sbjct: 475 GLDLCFTQEQMPYFRARTAKEIL 497
>sp|Q6NXL6|SENP5_MOUSE Sentrin-specific protease 5 OS=Mus musculus GN=Senp5 PE=2 SV=1
Length = 749
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 75/185 (40%), Gaps = 27/185 (14%)
Query: 165 MGWLGDEHIHEYLRLISEKQQQYPNALLQHVTHTDTFFWLSLWVTAHN-VKIMTD-VDM- 221
WL D+ I+ Y LI + A+ V ++FF L +N VK T VD+
Sbjct: 574 QNWLNDQVINMYGELIMD-------AVPDKVHFFNSFFHRQLVTKGYNGVKRWTKKVDLF 626
Query: 222 ----LLIPVNLDGSHWVLARVDFRKNKVWIYDSLLTFCDDKRYKLKFKSLKVIFPRWLEY 277
LLIP++L+ HW L V + YDS + FK ++L
Sbjct: 627 KKSLLLIPIHLE-VHWSLITVTLSSRIISFYDS---------QGIHFKFCVENIRKYLLT 676
Query: 278 VGFYNIRPELRSEYPWKVIAVKSAPQQEPGTGDCGVFVLMVTMYLMFGLRFEFNASHVEY 337
RPE W+ K PQQ+ DCGVFVL L F+F+ +
Sbjct: 677 EAREKNRPEFLQG--WQTAVTKCIPQQK-NDSDCGVFVLQYCKCLALEQPFQFSQEDMPR 733
Query: 338 FRKKI 342
RK+I
Sbjct: 734 VRKRI 738
>sp|Q8WP32|SENP5_MACFA Sentrin-specific protease 5 OS=Macaca fascicularis GN=SENP5 PE=2
SV=1
Length = 755
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 75/183 (40%), Gaps = 27/183 (14%)
Query: 167 WLGDEHIHEYLRLISEKQQQYPNALLQHVTHTDTFFWLSLWVTAHN-VKIMTD-VDM--- 221
WL D+ I+ Y LI + A+ V ++FF L +N VK T VD+
Sbjct: 582 WLNDQVINMYGELIMD-------AVPDKVHFFNSFFHRQLVTKGYNGVKRWTKKVDLFKK 634
Query: 222 --LLIPVNLDGSHWVLARVDFRKNKVWIYDSLLTFCDDKRYKLKFKSLKVIFPRWLEYVG 279
LLIP++L+ HW L V + YDS + FK ++L
Sbjct: 635 SLLLIPIHLE-VHWSLITVTLSNRIISFYDS---------QGIHFKFCVENIRKYLLTEA 684
Query: 280 FYNIRPELRSEYPWKVIAVKSAPQQEPGTGDCGVFVLMVTMYLMFGLRFEFNASHVEYFR 339
RPE W+ K PQQ+ DCGVFVL L F+F+ + R
Sbjct: 685 REKNRPEFLQG--WQTAVTKCIPQQK-NDSDCGVFVLQYCKCLALEQPFQFSQEDMPRVR 741
Query: 340 KKI 342
K+I
Sbjct: 742 KRI 744
>sp|Q96HI0|SENP5_HUMAN Sentrin-specific protease 5 OS=Homo sapiens GN=SENP5 PE=1 SV=3
Length = 755
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 75/183 (40%), Gaps = 27/183 (14%)
Query: 167 WLGDEHIHEYLRLISEKQQQYPNALLQHVTHTDTFFWLSLWVTAHN-VKIMTD-VDM--- 221
WL D+ I+ Y LI + A+ V ++FF L +N VK T VD+
Sbjct: 582 WLNDQVINMYGELIMD-------AVPDKVHFFNSFFHRQLVTKGYNGVKRWTKKVDLFKK 634
Query: 222 --LLIPVNLDGSHWVLARVDFRKNKVWIYDSLLTFCDDKRYKLKFKSLKVIFPRWLEYVG 279
LLIP++L+ HW L V + YDS + FK ++L
Sbjct: 635 SLLLIPIHLE-VHWSLITVTLSNRIISFYDS---------QGIHFKFCVENIRKYLLTEA 684
Query: 280 FYNIRPELRSEYPWKVIAVKSAPQQEPGTGDCGVFVLMVTMYLMFGLRFEFNASHVEYFR 339
RPE W+ K PQQ+ DCGVFVL L F+F+ + R
Sbjct: 685 REKNRPEFLQ--GWQTAVTKCIPQQK-NDSDCGVFVLQYCKCLALEQPFQFSQEDMPRVR 741
Query: 340 KKI 342
K+I
Sbjct: 742 KRI 744
>sp|Q02724|ULP1_YEAST Ubiquitin-like-specific protease 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ULP1 PE=1 SV=1
Length = 621
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 32/169 (18%)
Query: 163 ASMGWLGDEHIHEYLRLISEKQQQYPNALLQHVTHTDTFFWLSL----------WVTAHN 212
A WL D I +++ I ++ PN + ++FF+ +L W+
Sbjct: 444 APRRWLNDTIIEFFMKYI---EKSTPNTVA-----FNSFFYTNLSERGYQGVRRWMKRKK 495
Query: 213 VKIMTDVDMLLIPVNLDGSHWVLARVDFRKNKVWIYDSLLTFCDDKRYKLKFKSLKVIFP 272
+I +D + P+NL+ SHW L +D +K + DSL + + + K +
Sbjct: 496 TQI-DKLDKIFTPINLNQSHWALGIIDLKKKTIGYVDSLSNGPNAMSFAILTDLQKYVME 554
Query: 273 RWLEYVGFYNIRPELRSEYPWKVIAVKSAPQQEPGTGDCGVFVLMVTMY 321
+G + +I + PQQ P DCG++V M T+Y
Sbjct: 555 ESKHTIG-----------EDFDLIHL-DCPQQ-PNGYDCGIYVCMNTLY 590
>sp|Q9EQE1|SENP2_RAT Sentrin-specific protease 2 OS=Rattus norvegicus GN=Senp2 PE=1 SV=1
Length = 588
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 83/209 (39%), Gaps = 52/209 (24%)
Query: 167 WLGDEHIHEYLRLISE--KQQQYPNALLQHVTHTDTFFWLSL----------WVTAHNVK 214
WL DE I+ Y+ L+ E K+Q YP + TFF+ L W N
Sbjct: 409 WLNDEVINFYMNLLVERSKKQGYPA-----LHALSTFFYPKLKSGGYQAVKRWTKGVN-- 461
Query: 215 IMTDVDMLLIPVNLDGSHWVLARVDFRKNKVWIYDS-----------LLTFCDDKRYKLK 263
+ D +++L+P++ HW L +D RK + DS LL + D+ +
Sbjct: 462 -LFDQELVLVPIHRK-VHWSLVVMDLRKKCLKYLDSMGQKGHRICEILLQYLQDESKTKR 519
Query: 264 FKSLKVIFPRWLEYVGFYNIRPELRSEYPWKVIAVKSAPQQEPGTGDCGVFVLMVTMYLM 323
L ++ W Y+++P PQQ G+ DCG+F Y+
Sbjct: 520 NTDLNLL--EWT----HYSMKPH-------------EIPQQLNGS-DCGMFTCKYADYIS 559
Query: 324 FGLRFEFNASHVEYFRKKITVDIFNDDII 352
F + FRKK+ +I + ++
Sbjct: 560 RDKPITFTQHQMPLFRKKMVWEILHQQLL 588
>sp|Q5R7K7|SENP2_PONAB Sentrin-specific protease 2 OS=Pongo abelii GN=SENP2 PE=2 SV=1
Length = 589
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 88/209 (42%), Gaps = 52/209 (24%)
Query: 167 WLGDEHIHEYLRLISE--KQQQYPNALLQHVTHTDTFFWLSL----------WVTAHNVK 214
WL DE I+ Y+ L+ E K+Q YP AL HV TFF+ L W N
Sbjct: 410 WLNDEVINFYMNLLVERNKKQGYP-AL--HVF--STFFYPKLKSGGYQAVKRWTKGVN-- 462
Query: 215 IMTDVDMLLIPVNLDGSHWVLARVDFRKNKVWIYDS-----------LLTFCDDKRYKLK 263
+ + +++L+P++ HW L +D RK + DS LL + D+
Sbjct: 463 -LFEQEIILVPIHRK-VHWSLVVIDLRKKCLKYLDSMGQKGHRICEILLQYLQDES---- 516
Query: 264 FKSLKVIFPRWLEYVGFYNIRPELRSEYPWKVIAVKSAPQQEPGTGDCGVFVLMVTMYLM 323
K+ + I LE+ Y+++P PQQ G+ DCG+F Y+
Sbjct: 517 -KTKRNIDLNLLEWT-HYSMKPH-------------EIPQQLNGS-DCGMFTCKYADYIS 560
Query: 324 FGLRFEFNASHVEYFRKKITVDIFNDDII 352
F + FRKK+ +I + ++
Sbjct: 561 RDKPITFTQHQMPLFRKKMVWEILHQQLL 589
>sp|Q91ZX6|SENP2_MOUSE Sentrin-specific protease 2 OS=Mus musculus GN=Senp2 PE=1 SV=2
Length = 588
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 84/210 (40%), Gaps = 54/210 (25%)
Query: 167 WLGDEHIHEYLRLISE--KQQQYPNALLQHVTHT-DTFFWLSL----------WVTAHNV 213
WL DE I+ Y+ L+ E K+Q YP H TFF+ L W N
Sbjct: 409 WLNDEVINFYMNLLVERSKKQGYP------ALHAFSTFFYPKLKSGGYQAVKRWTKGVN- 461
Query: 214 KIMTDVDMLLIPVNLDGSHWVLARVDFRKNKVWIYDS-----------LLTFCDDKRYKL 262
+ + +++L+P++ HW L +D RK + DS LL + D+
Sbjct: 462 --LFEQELVLVPIHRK-VHWSLVVMDLRKKCLKYLDSMGQKGHRICEILLQYLQDESKTK 518
Query: 263 KFKSLKVIFPRWLEYVGFYNIRPELRSEYPWKVIAVKSAPQQEPGTGDCGVFVLMVTMYL 322
+ L + LE+ Y+++P PQQ G+ DCG+F Y+
Sbjct: 519 RNTDLNL-----LEWT-HYSMKPH-------------EIPQQLNGS-DCGMFTCKYADYI 558
Query: 323 MFGLRFEFNASHVEYFRKKITVDIFNDDII 352
F + FRKK+ +I + ++
Sbjct: 559 SRDKPITFTQHQMPLFRKKMVWEILHQQLL 588
>sp|Q9HC62|SENP2_HUMAN Sentrin-specific protease 2 OS=Homo sapiens GN=SENP2 PE=1 SV=3
Length = 589
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 84/199 (42%), Gaps = 32/199 (16%)
Query: 167 WLGDEHIHEYLRLISE--KQQQYPNALLQHVTHTDTFFWLSL----------WVTAHNVK 214
WL DE I+ Y+ L+ E K+Q YP AL HV TFF+ L W N
Sbjct: 410 WLNDEVINFYMNLLVERNKKQGYP-AL--HVF--STFFYPKLKSGGYQAVKRWTKGVN-- 462
Query: 215 IMTDVDMLLIPVNLDGSHWVLARVDFRKNKVWIYDSLLTFCDDKRYKLKFKSLKVIFPRW 274
+ + +++L+P++ HW L +D RK + DS+ K + I ++
Sbjct: 463 -LFEQEIILVPIHRK-VHWSLVVIDLRKKCLKYLDSM---------GQKGHRICEILLQY 511
Query: 275 LEYVGFYNIRPELRS-EYPWKVIAVKSAPQQEPGTGDCGVFVLMVTMYLMFGLRFEFNAS 333
L+ +L E+ + PQQ G+ DCG+F Y+ F
Sbjct: 512 LQDESKTKRNSDLNLLEWTHHSMKPHEIPQQLNGS-DCGMFTCKYADYISRDKPITFTQH 570
Query: 334 HVEYFRKKITVDIFNDDII 352
+ FRKK+ +I + ++
Sbjct: 571 QMPLFRKKMVWEILHQQLL 589
>sp|Q9EP97|SENP3_MOUSE Sentrin-specific protease 3 OS=Mus musculus GN=Senp3 PE=1 SV=1
Length = 568
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 106/259 (40%), Gaps = 23/259 (8%)
Query: 101 PLPRPQIMEHAIDMNTSVDVNPLRGLEDSSLFDEFDRWFTGDSRVRR-RVQHPRSFFQII 159
PL +++E D+ P R L + R G++ VR RV + R +
Sbjct: 327 PLSTDEVVEKLEDIFQQEFSTPSRKSLVLQLIQSYQR-MPGNAMVRGFRVSYKRHVLTMD 385
Query: 160 -LGTA-SMGWLGDEHIHEYLRLISE---KQQQYPNALLQHVTHTDTFFWLSLWVTAHNVK 214
LGT WL D+ ++ Y L+ + ++ + N+ T + + W NV
Sbjct: 386 DLGTLYGQNWLNDQVMNMYGDLVMDTVPEKVHFFNSFFYDKLRTKGYDGVKRWTK--NVD 443
Query: 215 IMTDVDMLLIPVNLDGSHWVLARVDFRKNKVWIYDSLLTFCDDKRYKLKFKSLKVIFPRW 274
I + ++LLIP++L+ HW L VD R+ + +DS T L + K I ++
Sbjct: 444 IF-NKELLLIPIHLE-VHWSLISVDVRRRTITYFDSQRT--------LNRRCPKHIA-KY 492
Query: 275 LEYVGFYNIRPELRSEYPWKVIAVKSAPQQEPGTGDCGVFVLMVTMYLMFGLRFEFNASH 334
L+ R L WK + +Q DCG FVL +L F F
Sbjct: 493 LQAEAVKKDR--LDFHQGWKGYFKMNVARQN-NDSDCGAFVLQYCKHLALSQPFSFTQQD 549
Query: 335 VEYFRKKITVDIFNDDIIL 353
+ R++I ++ + + +
Sbjct: 550 MPKLRRQIYKELCHCKLTV 568
>sp|Q9H4L4|SENP3_HUMAN Sentrin-specific protease 3 OS=Homo sapiens GN=SENP3 PE=1 SV=2
Length = 574
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 106/259 (40%), Gaps = 23/259 (8%)
Query: 101 PLPRPQIMEHAIDMNTSVDVNPLRGLEDSSLFDEFDRWFTGDSRVRR-RVQHPRSFFQII 159
PL +++E D+ P R L + R G++ VR RV + R +
Sbjct: 333 PLSTDEVVEKLEDIFQQEFSTPSRKGLVLQLIQSYQR-MPGNAMVRGFRVAYKRHVLTMD 391
Query: 160 -LGTA-SMGWLGDEHIHEYLRLISE---KQQQYPNALLQHVTHTDTFFWLSLWVTAHNVK 214
LGT WL D+ ++ Y L+ + ++ + N+ T + + W NV
Sbjct: 392 DLGTLYGQNWLNDQVMNMYGDLVMDTVPEKVHFFNSFFYDKLRTKGYDGVKRWTK--NVD 449
Query: 215 IMTDVDMLLIPVNLDGSHWVLARVDFRKNKVWIYDSLLTFCDDKRYKLKFKSLKVIFPRW 274
I + ++LLIP++L+ HW L VD R+ + +DS T L + K I ++
Sbjct: 450 IF-NKELLLIPIHLE-VHWSLISVDVRRRTITYFDSQRT--------LNRRCPKHIA-KY 498
Query: 275 LEYVGFYNIRPELRSEYPWKVIAVKSAPQQEPGTGDCGVFVLMVTMYLMFGLRFEFNASH 334
L+ R L WK + +Q DCG FVL +L F F
Sbjct: 499 LQAEAVKKDR--LDFHQGWKGYFKMNVARQN-NDSDCGAFVLQYCKHLALSQPFSFTQQD 555
Query: 335 VEYFRKKITVDIFNDDIIL 353
+ R++I ++ + + +
Sbjct: 556 MPKLRRQIYKELCHCKLTV 574
>sp|P23546|E13E_TOBAC Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform GGIB50
OS=Nicotiana tabacum PE=1 SV=1
Length = 370
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 210 AHNVKIMTDVDMLLIPVNLDGSHWVLARVDFRKNKVWIYDSLLTFCDDKRYKL 262
+N+K+ T VDM LI G+ + ++ FR + W D+++ F D R L
Sbjct: 159 GNNIKVSTSVDMTLI-----GNSYPPSQGSFRNDARWFVDAIVGFLRDTRAPL 206
>sp|Q7NQI8|MIAB_CHRVO (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Chromobacterium violaceum (strain ATCC 12472 / DSM
30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757)
GN=miaB PE=3 SV=1
Length = 444
Score = 33.5 bits (75), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 50/123 (40%), Gaps = 17/123 (13%)
Query: 55 DVSGESVQVFTEVPPGVSKFGRAYISSYVYNSPYM---IPPVRRGQNV-RPLPR--PQIM 108
D+S ++ F +PP G A++S S Y + P RG+ V RP +I
Sbjct: 126 DISFPEIEKFDHIPPAKVDGGAAFVSIMEGCSKYCSFCVVPYTRGEEVSRPFEDVLTEIA 185
Query: 109 EHAIDMNTSV-----DVNPLRGL------EDSSLFDEFDRWFTGDSRVRRRVQHPRSFFQ 157
A + +VN RGL D +L E+ G R+R HPR F Q
Sbjct: 186 GLAAQGVKEITLLGQNVNAYRGLMSDGEIADFALLLEYVHEVPGVERIRFTTSHPREFSQ 245
Query: 158 IIL 160
I+
Sbjct: 246 RII 248
>sp|Q0V147|AMPP2_PHANO Probable Xaa-Pro aminopeptidase SNOG_02267 OS=Phaeosphaeria nodorum
(strain SN15 / ATCC MYA-4574 / FGSC 10173) GN=SNOG_02267
PE=3 SV=2
Length = 789
Score = 33.1 bits (74), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 99 VRPLPRPQIMEHAIDMNTSVDVNPLRGLEDSSLFDEFDRWFTGDSRVRR 147
+RP+ R M + + SVD P G SLF F R T D +++R
Sbjct: 485 LRPIARSSTMPAELKQDKSVDFEPFEG---PSLFSNFRRSMTTDEKIQR 530
>sp|B0BAX8|CDUB2_CHLTB Deubiquitinase and deneddylase Dub2 OS=Chlamydia trachomatis
serovar L2b (strain UCH-1/proctitis) GN=cdu2 PE=3 SV=1
Length = 339
Score = 31.6 bits (70), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Query: 215 IMTDVDMLLIPVNLDGSHWVLARVDFRKNKVWIYDSLLTFC---DDKRYKLK--FKSLKV 269
++T +D + + SHWVL VD V +DSL + R +L+ SL
Sbjct: 186 MLTKMDQTMSSGRVGNSHWVLVIVDIEYRCVTFFDSLCDYVASPQQMREQLEGLAVSLGA 245
Query: 270 IFPRWLEYVGFYNIRPELRSEYPWKVIAVKSAPQQEPGTGDCGVFVL 316
I+P+ G + + EL S P++V + Q PG CG +
Sbjct: 246 IYPK---EGGADSDQEELLS--PFQVRIGSTVKVQSPGEFTCGAWCC 287
>sp|B0B999|CDUB2_CHLT2 Deubiquitinase and deneddylase Dub2 OS=Chlamydia trachomatis
serovar L2 (strain 434/Bu / ATCC VR-902B) GN=cdu2 PE=3
SV=1
Length = 339
Score = 31.6 bits (70), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Query: 215 IMTDVDMLLIPVNLDGSHWVLARVDFRKNKVWIYDSLLTFC---DDKRYKLK--FKSLKV 269
++T +D + + SHWVL VD V +DSL + R +L+ SL
Sbjct: 186 MLTKMDQTMSSGRVGNSHWVLVIVDIEYRCVTFFDSLCDYVASPQQMREQLEGLAVSLGA 245
Query: 270 IFPRWLEYVGFYNIRPELRSEYPWKVIAVKSAPQQEPGTGDCGVFVL 316
I+P+ G + + EL S P++V + Q PG CG +
Sbjct: 246 IYPK---EGGADSDQEELLS--PFQVRIGSTVKVQSPGEFTCGAWCC 287
>sp|C4PLJ4|CDUB2_CHLTZ Deubiquitinase and deneddylase Dub2 OS=Chlamydia trachomatis
serovar B (strain TZ1A828/OT) GN=cdu2 PE=3 SV=1
Length = 339
Score = 31.6 bits (70), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 215 IMTDVDMLLIPVNLDGSHWVLARVDFRKNKVWIYDSLLTFC---DDKRYKLK--FKSLKV 269
++T +D + + SHWVL VD V +DS + R +L+ SL
Sbjct: 186 MLTKMDQTMSSGRVGNSHWVLVIVDIEHRCVTFFDSFYNYIASPQQMREQLEGLAASLGA 245
Query: 270 IFPRWLEYVGFYNIRPELRSEYPWKVIAVKSAPQQEPGTGDCGVFVL 316
I+P+ G + + EL S P++V + Q PG CG +
Sbjct: 246 IYPK---EGGADSDQEELLS--PFQVRIGSTVKVQSPGEFTCGAWCC 287
>sp|Q3KKG9|CDUB2_CHLTA Deubiquitinase and deneddylase Dub2 OS=Chlamydia trachomatis
serovar A (strain HAR-13 / ATCC VR-571B) GN=cdu2 PE=3
SV=1
Length = 339
Score = 31.6 bits (70), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 215 IMTDVDMLLIPVNLDGSHWVLARVDFRKNKVWIYDSLLTFC---DDKRYKLK--FKSLKV 269
++T +D + + SHWVL VD V +DS + R +L+ SL
Sbjct: 186 MLTKMDQTMSSGRVGNSHWVLVIVDIEHRCVTFFDSFYNYIASPQQMREQLEGLAASLGA 245
Query: 270 IFPRWLEYVGFYNIRPELRSEYPWKVIAVKSAPQQEPGTGDCGVFVL 316
I+P+ G + + EL S P++V + Q PG CG +
Sbjct: 246 IYPK---EGGADSDQEELLS--PFQVRIGSTVKVQSPGEFTCGAWCC 287
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.140 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 140,338,637
Number of Sequences: 539616
Number of extensions: 6025230
Number of successful extensions: 12419
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 12393
Number of HSP's gapped (non-prelim): 30
length of query: 353
length of database: 191,569,459
effective HSP length: 118
effective length of query: 235
effective length of database: 127,894,771
effective search space: 30055271185
effective search space used: 30055271185
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)