Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>037750
IYKRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGN
LVRYAEKLKTEFVEAGSSSSIPPFPSDPSSSTPRKGPSHWSSKPKPKPKREKTEEEKTFR
RRAKYFLATQLVAIVLFLSVMNIYDISEPELDNEGDIDFD

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  037750
        (160 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2059024 - symbol:AT2G19080 "AT2G19080" species...   236  1.3e-25   2


>TAIR|locus:2059024 [details] [associations]
            symbol:AT2G19080 "AT2G19080" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005622
            "intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
            [GO:0006626 "protein targeting to mitochondrion"
            evidence=IEA;RCA;IMP] [GO:0005739 "mitochondrion" evidence=IDA]
            [GO:0005743 "mitochondrial inner membrane" evidence=IDA]
            [GO:0009536 "plastid" evidence=IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005741 "mitochondrial outer membrane"
            evidence=IDA] [GO:0006406 "mRNA export from nucleus" evidence=RCA]
            [GO:0006606 "protein import into nucleus" evidence=RCA] [GO:0051604
            "protein maturation" evidence=RCA] InterPro:IPR017410
            PIRSF:PIRSF038150 GO:GO:0009536 GO:GO:0006626 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0005741 GO:GO:0005743
            Gene3D:1.20.1050.10 InterPro:IPR010987 EMBL:AC002392
            eggNOG:NOG273294 EMBL:AY070737 EMBL:AY087648 EMBL:AY142046
            IPI:IPI00528657 PIR:T00528 RefSeq:NP_565446.1 UniGene:At.28341
            ProteinModelPortal:O64471 IntAct:O64471 PRIDE:O64471
            EnsemblPlants:AT2G19080.1 GeneID:816425 KEGG:ath:AT2G19080
            TAIR:At2g19080 HOGENOM:HOG000006368 InParanoid:O64471 OMA:QVYEDVS
            PhylomeDB:O64471 ProtClustDB:CLSN2688245 Genevestigator:O64471
            Uniprot:O64471
        Length = 315

 Score = 236 (88.1 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
 Identities = 49/75 (65%), Positives = 56/75 (74%)

Query:     1 IYKRASIAYRALSTRLGEESFLFENRPSSVDAIXXXXXXXXXXXXPETSLLKSKLLEHGN 60
             IYKRAS AY ALSTRLGE+ FLFE+RPSS+DA             P TS+L+ KLLEH N
Sbjct:   166 IYKRASEAYEALSTRLGEQKFLFEDRPSSLDAFLLSHILFIIQALPVTSVLRCKLLEHSN 225

Query:    61 LVRYAEKLKTEFVEA 75
             LVRYAEKLK+EF+EA
Sbjct:   226 LVRYAEKLKSEFLEA 240

 Score = 69 (29.3 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
 Identities = 14/34 (41%), Positives = 23/34 (67%)

Query:   123 AKYFLATQLVAIVLFLSVMNIYDISEPELDNEGD 156
             A++FLA Q +A+V+++SVM      E E ++E D
Sbjct:   282 ARFFLAAQFLAVVIYVSVMGGGSSDELEYEDEDD 315


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.134   0.374    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      160       111   0.00091  102 3  11 22  0.47    30
                                                     29  0.42    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  533 (57 KB)
  Total size of DFA:  110 KB (2075 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.36u 0.09s 8.45t   Elapsed:  00:00:01
  Total cpu time:  8.36u 0.09s 8.45t   Elapsed:  00:00:01
  Start:  Tue May 21 05:49:00 2013   End:  Tue May 21 05:49:01 2013

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