Query 037750
Match_columns 160
No_of_seqs 146 out of 942
Neff 6.5
Searched_HMMs 46136
Date Fri Mar 29 04:01:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037750.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037750hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3028 Translocase of outer m 99.8 1.1E-18 2.4E-23 145.9 10.9 143 1-150 164-306 (313)
2 cd03211 GST_C_Metaxin2 GST_C f 99.7 3.9E-16 8.4E-21 115.8 7.8 69 1-69 58-126 (126)
3 cd03212 GST_C_Metaxin1_3 GST_C 99.6 1.4E-15 3E-20 114.6 8.6 73 1-73 65-137 (137)
4 KOG3027 Mitochondrial outer me 99.5 1.1E-13 2.3E-18 110.9 7.8 76 2-77 179-254 (257)
5 KOG4244 Failed axon connection 99.4 1.1E-13 2.3E-18 114.1 4.8 73 2-76 205-278 (281)
6 cd03193 GST_C_Metaxin GST_C fa 99.2 3.6E-11 7.8E-16 82.7 8.0 68 2-69 21-88 (88)
7 PF13410 GST_C_2: Glutathione 99.2 6.5E-11 1.4E-15 77.8 6.5 62 2-67 8-69 (69)
8 PF14497 GST_C_3: Glutathione 99.1 1.7E-10 3.6E-15 81.1 5.5 59 3-70 38-99 (99)
9 PF00043 GST_C: Glutathione S- 99.0 1.7E-09 3.6E-14 74.5 7.5 64 3-71 31-94 (95)
10 cd03180 GST_C_2 GST_C family, 98.9 4E-09 8.7E-14 74.1 7.1 62 3-71 46-107 (110)
11 cd03189 GST_C_GTT1_like GST_C 98.9 3.6E-09 7.7E-14 75.8 6.9 62 3-71 57-118 (119)
12 cd03202 GST_C_etherase_LigE GS 98.9 3.9E-09 8.4E-14 77.6 6.8 64 2-70 60-123 (124)
13 cd03206 GST_C_7 GST_C family, 98.9 7E-09 1.5E-13 72.7 7.5 62 3-71 36-97 (100)
14 cd03187 GST_C_Phi GST_C family 98.9 6.5E-09 1.4E-13 74.0 7.3 64 3-71 48-111 (118)
15 cd03188 GST_C_Beta GST_C famil 98.9 1.1E-08 2.5E-13 72.2 7.5 62 3-71 46-107 (114)
16 cd03209 GST_C_Mu GST_C family, 98.9 1E-08 2.2E-13 74.4 7.3 63 3-71 38-100 (121)
17 cd03177 GST_C_Delta_Epsilon GS 98.8 1.3E-08 2.9E-13 73.2 7.6 65 2-72 40-104 (118)
18 cd03186 GST_C_SspA GST_N famil 98.8 9.9E-09 2.1E-13 72.4 6.7 64 2-71 37-100 (107)
19 cd03196 GST_C_5 GST_C family, 98.8 9.6E-09 2.1E-13 74.5 6.8 65 3-71 44-108 (115)
20 cd00299 GST_C_family Glutathio 98.8 1E-08 2.2E-13 70.0 6.4 63 2-68 38-100 (100)
21 cd03207 GST_C_8 GST_C family, 98.8 1.6E-08 3.5E-13 70.9 6.9 61 3-71 33-93 (103)
22 cd03190 GST_C_ECM4_like GST_C 98.8 1.9E-08 4.1E-13 75.5 6.6 69 3-71 40-109 (142)
23 cd03182 GST_C_GTT2_like GST_C 98.8 2.2E-08 4.8E-13 71.4 6.7 63 3-71 52-114 (117)
24 cd03181 GST_C_EFB1gamma GST_C 98.8 3.3E-08 7.2E-13 71.1 7.5 66 2-71 42-107 (123)
25 cd03178 GST_C_Ure2p_like GST_C 98.8 1.6E-08 3.4E-13 71.8 5.7 63 3-71 43-105 (113)
26 PLN02473 glutathione S-transfe 98.7 4.6E-08 9.9E-13 77.0 7.8 65 3-71 138-202 (214)
27 cd03210 GST_C_Pi GST_C family, 98.7 5E-08 1.1E-12 71.5 7.4 63 3-71 38-103 (126)
28 PRK10387 glutaredoxin 2; Provi 98.7 1.8E-08 4E-13 78.8 5.4 62 2-72 144-205 (210)
29 cd03204 GST_C_GDAP1 GST_C fami 98.7 3.9E-08 8.4E-13 71.9 6.6 67 2-71 31-108 (111)
30 PRK13972 GSH-dependent disulfi 98.7 5E-08 1.1E-12 77.2 7.6 62 3-71 135-196 (215)
31 cd03191 GST_C_Zeta GST_C famil 98.7 5.3E-08 1.2E-12 70.1 7.0 62 3-71 47-110 (121)
32 cd03185 GST_C_Tau GST_C family 98.7 2.6E-08 5.6E-13 71.9 5.3 69 2-71 37-106 (126)
33 cd03179 GST_C_1 GST_C family, 98.7 4.5E-08 9.7E-13 68.3 6.2 60 3-69 46-105 (105)
34 cd03208 GST_C_Alpha GST_C fami 98.7 5.5E-08 1.2E-12 72.8 7.0 62 4-71 43-106 (137)
35 cd03183 GST_C_Theta GST_C fami 98.7 6.1E-08 1.3E-12 70.3 6.9 63 3-71 48-111 (126)
36 cd03200 GST_C_JTV1 GST_C famil 98.7 8.7E-08 1.9E-12 67.7 6.7 58 3-70 38-95 (96)
37 cd03192 GST_C_Sigma_like GST_C 98.7 5.9E-08 1.3E-12 68.0 5.8 61 3-68 42-104 (104)
38 cd03201 GST_C_DHAR GST_C famil 98.7 5.8E-08 1.3E-12 71.3 5.9 66 3-71 33-101 (121)
39 cd03184 GST_C_Omega GST_C fami 98.6 4.2E-08 9E-13 71.5 4.9 69 2-71 34-104 (124)
40 cd03198 GST_C_CLIC GST_C famil 98.6 6.9E-08 1.5E-12 72.8 5.8 68 3-71 32-115 (134)
41 PRK10542 glutathionine S-trans 98.6 1.6E-07 3.4E-12 73.1 6.6 62 3-71 127-188 (201)
42 PLN02395 glutathione S-transfe 98.6 1.9E-07 4.1E-12 73.4 7.1 65 3-71 137-201 (215)
43 TIGR01262 maiA maleylacetoacet 98.5 2.5E-07 5.5E-12 72.4 7.0 61 4-71 133-195 (210)
44 PRK09481 sspA stringent starva 98.5 2.3E-07 5E-12 73.4 6.6 63 3-71 130-193 (211)
45 PTZ00057 glutathione s-transfe 98.5 3.3E-07 7.1E-12 72.3 6.4 63 3-71 126-190 (205)
46 PRK11752 putative S-transferas 98.4 4.5E-07 9.8E-12 74.7 6.4 68 3-71 181-249 (264)
47 COG0625 Gst Glutathione S-tran 98.4 6.7E-07 1.5E-11 70.4 7.1 64 3-73 134-197 (211)
48 cd03203 GST_C_Lambda GST_C fam 98.4 9.2E-07 2E-11 64.4 6.4 67 3-71 33-102 (120)
49 cd03195 GST_C_4 GST_C family, 98.4 1.7E-06 3.6E-11 62.5 7.1 59 3-71 45-104 (114)
50 PLN02378 glutathione S-transfe 98.3 1.1E-06 2.4E-11 69.9 6.3 65 4-71 122-190 (213)
51 cd03205 GST_C_6 GST_C family, 98.3 2E-06 4.3E-11 60.1 6.7 59 3-68 40-98 (98)
52 PF11801 Tom37_C: Tom37 C-term 98.3 1.4E-06 3E-11 67.9 6.0 53 3-55 111-167 (168)
53 TIGR02182 GRXB Glutaredoxin, G 98.3 1.1E-06 2.4E-11 69.7 5.3 60 3-72 144-204 (209)
54 cd03194 GST_C_3 GST_C family, 98.3 4.2E-06 9.1E-11 60.5 7.7 58 4-71 45-105 (114)
55 PRK10357 putative glutathione 98.2 4.8E-06 1E-10 64.9 7.3 64 3-71 128-191 (202)
56 PLN02817 glutathione dehydroge 98.2 4.1E-06 8.8E-11 69.5 6.1 66 3-71 174-242 (265)
57 TIGR00862 O-ClC intracellular 98.2 4.2E-06 9.2E-11 68.5 6.0 65 4-71 127-211 (236)
58 cd03197 GST_C_mPGES2 GST_C fam 98.1 8.5E-06 1.8E-10 62.6 6.4 52 15-71 95-146 (149)
59 PLN02907 glutamate-tRNA ligase 98.0 9.9E-06 2.1E-10 75.7 6.5 64 4-73 94-159 (722)
60 PRK15113 glutathione S-transfe 97.9 3.6E-05 7.7E-10 61.0 6.9 59 3-71 140-199 (214)
61 KOG0406 Glutathione S-transfer 97.9 1.6E-05 3.4E-10 65.1 4.4 66 3-71 132-202 (231)
62 KOG0867 Glutathione S-transfer 97.7 0.00012 2.7E-09 59.1 7.3 65 3-71 136-200 (226)
63 KOG4420 Uncharacterized conser 97.7 9.6E-05 2.1E-09 61.6 5.7 68 2-73 207-280 (325)
64 KOG1695 Glutathione S-transfer 97.3 0.00056 1.2E-08 55.1 6.1 62 5-71 128-191 (206)
65 COG0435 ECM4 Predicted glutath 96.8 0.00066 1.4E-08 57.1 2.0 67 3-70 208-276 (324)
66 KOG2903 Predicted glutathione 95.8 0.0037 8E-08 52.3 1.1 67 4-71 207-278 (319)
67 PF14834 GST_C_4: Glutathione 95.0 0.14 3.1E-06 37.8 7.1 39 3-42 46-85 (117)
68 PF04399 Glutaredoxin2_C: Glut 94.7 0.11 2.3E-06 39.2 5.9 61 2-71 61-121 (132)
69 KOG3029 Glutathione S-transfer 93.3 0.35 7.7E-06 41.2 7.0 55 17-76 306-360 (370)
70 cd03199 GST_C_GRX2 GST_C famil 93.2 0.42 9E-06 35.9 6.5 61 2-71 62-122 (128)
71 KOG1422 Intracellular Cl- chan 92.7 0.2 4.4E-06 40.6 4.5 65 4-71 127-196 (221)
72 KOG0868 Glutathione S-transfer 88.2 0.51 1.1E-05 37.8 3.0 60 5-71 137-198 (217)
73 PF02468 PsbN: Photosystem II 69.6 8.6 0.00019 23.5 3.3 28 125-153 9-36 (43)
74 PHA00726 hypothetical protein 66.7 1.9 4.2E-05 30.1 0.1 30 105-136 28-57 (89)
75 PRK13183 psbN photosystem II r 61.4 7.7 0.00017 24.0 2.0 28 125-153 12-39 (46)
76 KOG1147 Glutamyl-tRNA syntheta 59.2 11 0.00023 35.1 3.4 37 4-40 92-128 (712)
77 CHL00020 psbN photosystem II p 57.9 7.7 0.00017 23.7 1.6 28 125-153 9-36 (43)
78 PF09125 COX2-transmemb: Cytoc 57.5 33 0.00071 20.3 4.1 25 119-143 9-33 (38)
79 TIGR00847 ccoS cytochrome oxid 51.3 22 0.00048 22.4 3.0 23 127-149 12-36 (51)
80 TIGR03726 strep_RK_lipo putati 47.9 36 0.00079 19.7 3.2 25 119-143 3-28 (34)
81 PF06679 DUF1180: Protein of u 46.8 21 0.00045 27.8 2.8 25 116-140 90-114 (163)
82 PF13781 DoxX_3: DoxX-like fam 43.6 34 0.00073 24.3 3.3 25 119-143 54-78 (102)
83 PF06072 Herpes_US9: Alphaherp 41.0 47 0.001 21.7 3.3 19 125-143 33-51 (60)
84 KOG1668 Elongation factor 1 be 39.3 28 0.0006 28.7 2.6 34 6-39 10-43 (231)
85 PF11166 DUF2951: Protein of u 39.0 41 0.00089 24.0 3.1 21 120-140 69-89 (98)
86 PTZ00128 cytochrome c oxidase 38.8 1.1E+02 0.0024 25.2 6.0 16 125-140 58-73 (232)
87 KOG3970 Predicted E3 ubiquitin 38.1 53 0.0011 27.3 4.0 24 120-143 250-273 (299)
88 PRK09400 secE preprotein trans 36.7 44 0.00095 21.7 2.8 23 117-139 30-53 (61)
89 COG2999 GrxB Glutaredoxin 2 [P 36.4 70 0.0015 25.8 4.3 61 2-71 144-204 (215)
90 PF08628 Nexin_C: Sorting nexi 36.3 1.5E+02 0.0033 20.8 6.2 22 56-77 35-56 (113)
91 PRK14759 potassium-transportin 35.8 54 0.0012 18.3 2.6 17 125-141 5-22 (29)
92 PF12911 OppC_N: N-terminal TM 34.4 60 0.0013 19.8 3.1 26 117-142 10-35 (56)
93 PF04835 Pox_A9: A9 protein co 33.8 52 0.0011 21.0 2.6 19 125-143 24-42 (54)
94 PF13260 DUF4051: Protein of u 33.1 66 0.0014 20.2 3.0 18 123-140 4-21 (54)
95 PF04415 DUF515: Protein of un 33.0 39 0.00084 30.2 2.7 17 120-136 27-43 (416)
96 PLN00077 photosystem II reacti 30.9 73 0.0016 23.7 3.4 19 125-143 96-114 (128)
97 PF11298 DUF3099: Protein of u 30.7 1.4E+02 0.003 20.2 4.5 18 112-129 7-24 (73)
98 PHA03049 IMV membrane protein; 30.4 60 0.0013 21.7 2.6 19 125-143 8-26 (68)
99 PF03597 CcoS: Cytochrome oxid 29.8 87 0.0019 19.1 3.1 18 128-145 12-31 (45)
100 PF06796 NapE: Periplasmic nit 28.5 1.3E+02 0.0028 19.3 3.9 28 114-141 11-38 (56)
101 PF05961 Chordopox_A13L: Chord 28.0 71 0.0015 21.4 2.7 19 125-143 8-26 (68)
102 PF14967 FAM70: FAM70 protein 27.4 35 0.00076 29.3 1.4 25 119-143 20-46 (327)
103 PF04647 AgrB: Accessory gene 26.8 1.5E+02 0.0033 22.5 4.9 14 27-40 74-87 (185)
104 TIGR00327 secE_euk_arch protei 26.8 80 0.0017 20.6 2.7 23 117-139 26-49 (61)
105 PF10731 Anophelin: Thrombin i 26.0 74 0.0016 20.9 2.4 8 126-133 10-17 (65)
106 PF11174 DUF2970: Protein of u 25.7 1E+02 0.0022 19.7 3.0 25 115-139 21-46 (56)
107 PLN00082 photosystem II reacti 25.1 1.2E+02 0.0027 20.1 3.3 16 125-140 35-50 (67)
108 PF11297 DUF3098: Protein of u 24.3 1.2E+02 0.0027 20.3 3.3 20 125-144 10-29 (69)
109 PF04404 ERF: ERF superfamily; 23.8 82 0.0018 23.6 2.8 21 130-150 100-123 (160)
110 cd05170 PIKKc_SMG1 Suppressor 23.2 1.1E+02 0.0023 25.9 3.6 27 116-142 188-214 (307)
111 PRK13855 type IV secretion sys 22.7 97 0.0021 27.4 3.3 22 123-144 31-52 (376)
112 PF09889 DUF2116: Uncharacteri 22.6 2.2E+02 0.0047 18.4 4.2 17 124-140 39-56 (59)
113 PF07330 DUF1467: Protein of u 20.5 84 0.0018 21.8 2.0 21 125-145 57-77 (85)
114 PF12650 DUF3784: Domain of un 20.3 95 0.0021 21.3 2.3 33 107-139 31-63 (97)
115 TIGR01006 polys_exp_MPA1 polys 20.2 1.5E+02 0.0032 23.3 3.7 14 118-131 16-29 (226)
No 1
>KOG3028 consensus Translocase of outer mitochondrial membrane complex, subunit TOM37/Metaxin 1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.78 E-value=1.1e-18 Score=145.92 Aligned_cols=143 Identities=28% Similarity=0.390 Sum_probs=108.5
Q ss_pred CHHHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhhcccCCCCCC
Q 037750 1 IYKRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTEFVEAGSSSS 80 (160)
Q Consensus 1 i~~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r~~~~~~~~~ 80 (160)
|+.+|++++..|+++||++.|||||+||++||.+|+|++.++..++++..++.++..|+||++|++|+...+|...+++.
T Consensus 164 i~~~Aska~~~LS~~Lgs~kffFgd~psslDa~lfs~la~~~~~~Lp~~~Lq~~l~~~~NL~~~~~~i~s~~f~~~~s~~ 243 (313)
T KOG3028|consen 164 IYKDASKALNLLSTLLGSKKFFFGDKPSSLDALLFSYLAILLQVALPNDSLQVHLLAHKNLVRYVERIRSLYFRASGSPV 243 (313)
T ss_pred HHHHHHHHHHHHHHHhcCceEeeCCCCchHHHHHHHHHHHHHhccCCchhHHHHHHhcchHHHHHHHHHHHHhcccCCCC
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999885432
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHhccccCCCCc
Q 037750 81 IPPFPSDPSSSTPRKGPSHWSSKPKPKPKREKTEEEKTFRRRAKYFLATQLVAIVLFLSVMNIYDISEPE 150 (160)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ed~~~~rr~~~~~~~a~~a~~~y~~~~g~~~~~~~~ 150 (160)
.+.-.+. +..+ .++ +.++..++.+++.+...++.+++..+..+++++.-|.-..+++..+..+
T Consensus 244 ~l~~~~~--s~~~-~~s----~~~~~~~s~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ 306 (313)
T KOG3028|consen 244 PLKLQPP--SPAS-ITS----KEEKTRKSELKTSESAKLKAFVRRNLFAQFLSIQRLVPFRASTVVDGLA 306 (313)
T ss_pred cccCCCC--CCCc-ccc----cchhhhhhhhhhccccchhHHHHhhHHHHHHHhhhccceeccccccccc
Confidence 2211111 1111 111 2223334444566777777778888888888888888777774333333
No 2
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=99.65 E-value=3.9e-16 Score=115.82 Aligned_cols=69 Identities=23% Similarity=0.520 Sum_probs=63.0
Q ss_pred CHHHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHH
Q 037750 1 IYKRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLK 69 (160)
Q Consensus 1 i~~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~ 69 (160)
+++.++++|++|+++|++++||+|++||++||++|+|+..+++.+.+++.++..+.+||||++|++||.
T Consensus 58 ~~~~~~~~l~aLs~~Lg~~~~l~Gd~pT~~Da~vf~~la~~~~~~~~~~~l~~~~~~~pnL~~y~~Ri~ 126 (126)
T cd03211 58 VIEEVDQCCQALSQRLGTQPYFFGDQPTELDALVFGHLFTILTTQLPNDELAEKVKKYSNLLAFCRRIE 126 (126)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCcHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHhcC
Confidence 467899999999999999999999999999999999999888776666788888999999999999983
No 3
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=99.63 E-value=1.4e-15 Score=114.58 Aligned_cols=73 Identities=30% Similarity=0.530 Sum_probs=67.6
Q ss_pred CHHHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhhcc
Q 037750 1 IYKRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTEFV 73 (160)
Q Consensus 1 i~~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r~~ 73 (160)
+++++.+++++|+++|++++||+|++||.+||++++|+..++..+.+++.++..+.+||||++|++||.++||
T Consensus 65 ~~~~a~~~l~~l~~~L~~~~~~~Gd~~t~~D~~~~~~l~~~~~~~~~~~~l~~~~~~~pnL~~~~~ri~~~~f 137 (137)
T cd03212 65 IYRDAKECLNLLSQRLGESQFFFGDTPTSLDALVFGYLAPLLKAPLPNNKLQNHLKQCPNLCRFCDRILSLYF 137 (137)
T ss_pred HHHHHHHHHHHHHHHHCCCCcCCCCCCcHHHHHHHHHHHHHHhccCCChHHHHHHHHCcHHHHHHHHHHHhcC
Confidence 3678999999999999999999999999999999999998887777778899999999999999999999886
No 4
>KOG3027 consensus Mitochondrial outer membrane protein Metaxin 2, Metaxin 1-binding protein [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.48 E-value=1.1e-13 Score=110.86 Aligned_cols=76 Identities=20% Similarity=0.422 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhhcccCCC
Q 037750 2 YKRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTEFVEAGS 77 (160)
Q Consensus 2 ~~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r~~~~~~ 77 (160)
.+++.+|.++|+.+|+.++||+|++||-+||++|||+..++.+.+++..+...++.|+||.+||.||.+.||....
T Consensus 179 ie~vdkc~~aLsa~L~~q~yf~g~~P~elDAlvFGHlytilTt~Lpn~ela~~lkkys~LlefcrrIeq~yF~~r~ 254 (257)
T KOG3027|consen 179 IEQVDKCCRALSAQLGSQPYFTGDQPTELDALVFGHLYTILTTRLPNMELANILKKYSNLLEFCRRIEQQYFKQRL 254 (257)
T ss_pred HHHHHHHHHHHHHHhcCCCccCCCCccHHHHHHHhhhHHhhhhcCCcHHHHHHHHHhHHHHHHHHHHHHHHHHhcc
Confidence 5788999999999999999999999999999999999999999999999999999999999999999999998653
No 5
>KOG4244 consensus Failed axon connections (fax) protein/glutathione S-transferase-like protein [Signal transduction mechanisms]
Probab=99.43 E-value=1.1e-13 Score=114.09 Aligned_cols=73 Identities=23% Similarity=0.360 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHh-hChHHHHHHHHHHhhcccCC
Q 037750 2 YKRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLL-EHGNLVRYAEKLKTEFVEAG 76 (160)
Q Consensus 2 ~~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~-~~pnL~~y~eRv~~r~~~~~ 76 (160)
.+-+++.|++++..||+++||||+++|.+||.+||||+.+.+ |.. +.++..|+ .||||..||+||++++||++
T Consensus 205 ~ell~rDlr~i~~~Lg~KkflfGdkit~~DatvFgqLa~v~Y-P~~-~~i~d~le~d~p~l~eYceRIr~~~yP~d 278 (281)
T KOG4244|consen 205 DELLHRDLRAISDYLGDKKFLFGDKITPADATVFGQLAQVYY-PFR-SHISDLLEGDFPNLLEYCERIRKEIYPND 278 (281)
T ss_pred HHHHHHHHHHHHHHhCCCccccCCCCCcceeeehhhhhheec-cCC-CcHHHHHhhhchHHHHHHHHHHHHhCCCc
Confidence 456789999999999999999999999999999999999988 543 57888897 99999999999999999965
No 6
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=99.25 E-value=3.6e-11 Score=82.71 Aligned_cols=68 Identities=37% Similarity=0.558 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHH
Q 037750 2 YKRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLK 69 (160)
Q Consensus 2 ~~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~ 69 (160)
.+++.++++.||++|++++|++|++||++|+.+++++..+.........+...+..+|+|.+|++||.
T Consensus 21 ~~~~~~~l~~le~~L~~~~yl~Gd~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~r~~ 88 (88)
T cd03193 21 YSLAKKDLKALSDLLGDKKFFFGDKPTSLDATVFGHLASILYAPLPNSALQLILKEYPNLVEYCERIR 88 (88)
T ss_pred HHHHHHHHHHHHHHhCCCCccCCCCCCHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHHhC
Confidence 46788999999999999999999999999999998887654432222234445778999999999984
No 7
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.19 E-value=6.5e-11 Score=77.78 Aligned_cols=62 Identities=27% Similarity=0.325 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHH
Q 037750 2 YKRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEK 67 (160)
Q Consensus 2 ~~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eR 67 (160)
.+++.+.|+.||++|++++||+|++||++|+.+++++..+....... .....+|+|.+|++|
T Consensus 8 ~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~l~~~l~~~~~~~~~~----~~~~~~p~l~~w~~r 69 (69)
T PF13410_consen 8 RAQLEAALDALEDHLADGPFLFGDRPSLADIALAPFLWRLRFVGPDF----DLLEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHHTTSSBTTBSS--HHHHHHHHHHHHHHHCTHTC----CHHTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHhCcCc----CccccCHHHHHHHhC
Confidence 46788999999999999999999999999999999888666554221 234799999999987
No 8
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=99.09 E-value=1.7e-10 Score=81.09 Aligned_cols=59 Identities=24% Similarity=0.405 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHhhCCCC--ccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHH-hhChHHHHHHHHHHh
Q 037750 3 KRASIAYRALSTRLGEES--FLFENRPSSVDAILLAHVLVTLHALPETSLLKSKL-LEHGNLVRYAEKLKT 70 (160)
Q Consensus 3 ~~a~~~L~aLe~~L~~~~--yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l-~~~pnL~~y~eRv~~ 70 (160)
+++.+.+..|+..|+++. ||+|++||++|+.+|+++..+.+. .+ +++|||.+|++||++
T Consensus 38 ~~~~~~l~~l~~~L~~~~~~~l~G~~~T~AD~~v~~~l~~~~~~---------~~~~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 38 EELPKALKILEKHLAERGGDFLVGDKPTLADIAVFGFLASLRWA---------DFPKDYPNLVRWYERIEE 99 (99)
T ss_dssp HHHHHHHHHHHHHHHHTSSSSSSSSS--HHHHHHHHHHHHHHCC---------HHTTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCeeecCCCCCHHHHHHHHHHHHHhhc---------ccccccHHHHHHHHhhcC
Confidence 567889999999999888 999999999999999999655543 12 589999999999974
No 9
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.01 E-value=1.7e-09 Score=74.51 Aligned_cols=64 Identities=16% Similarity=0.209 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhh
Q 037750 3 KRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 3 ~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r 71 (160)
.+..++|+.++.+|.+++||.|+++|.+|+++++.+..+....... + ..++|+|.+|.+||.+|
T Consensus 31 ~~~~~~l~~le~~l~~~~~l~G~~~t~ADi~~~~~~~~~~~~~~~~--~---~~~~P~l~~w~~~~~~~ 94 (95)
T PF00043_consen 31 AKVPRYLEVLEKRLKGGPYLVGDKLTIADIALFPMLDWLERLGPDF--L---FEKFPKLKKWYERMFAR 94 (95)
T ss_dssp HHHHHHHHHHHHHHHTSSSSSBSS-CHHHHHHHHHHHHHHHHTTTT--T---HTTSHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHcCCCeeeccCCchhHHHHHHHHHHHHHhCCCc--c---cccCHHHHHHHHHHHcC
Confidence 4677899999999999999999999999999998888666654321 1 37999999999999876
No 10
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.92 E-value=4e-09 Score=74.06 Aligned_cols=62 Identities=15% Similarity=0.095 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhh
Q 037750 3 KRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 3 ~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r 71 (160)
++..++|+.||++|++++||+|+++|.+|+++++++..+.... ..+.++|+|.+|++||.++
T Consensus 46 ~~~~~~l~~lE~~L~~~~~l~g~~~t~aDi~~~~~~~~~~~~~-------~~~~~~p~l~~~~~~~~~~ 107 (110)
T cd03180 46 AAWAKLMAILDAQLAGRPYLAGDRFTLADIPLGCSAYRWFELP-------IERPPLPHLERWYARLRAR 107 (110)
T ss_pred HHHHHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHHHHHHcc-------cccccCchHHHHHHHHHhC
Confidence 5778999999999999999999999999998887765333211 1256899999999999985
No 11
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=98.92 E-value=3.6e-09 Score=75.85 Aligned_cols=62 Identities=15% Similarity=0.222 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhh
Q 037750 3 KRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 3 ~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r 71 (160)
.++.++|+.||++|++++||+|+++|++|++++..+..+.... . .+..+|+|.+|++||.++
T Consensus 57 ~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~l~~~~~~~~~~~-----~--~~~~~p~l~~w~~~~~~~ 118 (119)
T cd03189 57 PELKKHLDFLEDRLAKKGYFVGDKLTAADIMMSFPLEAALARG-----P--LLEKYPNIAAYLERIEAR 118 (119)
T ss_pred HHHHHHHHHHHHHHccCCCCCCCCCCHHHHHHHHHHHHHHHcC-----c--ccccCchHHHHHHHHhcC
Confidence 4678899999999999999999999999998886766443221 1 356899999999999875
No 12
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.91 E-value=3.9e-09 Score=77.61 Aligned_cols=64 Identities=17% Similarity=0.145 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHh
Q 037750 2 YKRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKT 70 (160)
Q Consensus 2 ~~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~ 70 (160)
.+++++.|+.|+++|++++||.|++||.+|+++++++....... . . ..+.++|+|.+|++||.+
T Consensus 60 ~~~~~~~l~~l~~~L~~~~fl~Gd~~t~AD~~l~~~l~~~~~~~-~---~-~~~~~~p~l~~W~~r~~~ 123 (124)
T cd03202 60 LANFRAALEPLRATLKGQPFLGGAAPNYADYIVFGGFQWARIVS-P---F-PLLEEDDPVYDWFERCLD 123 (124)
T ss_pred HHHHHHHHHHHHHHHcCCCccCCCCCchhHHHHHHHHHHHHHcC-c---c-cccccCChHHHHHHHHhc
Confidence 46788999999999999999999999999999998887554321 1 1 235689999999999976
No 13
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.90 E-value=7e-09 Score=72.69 Aligned_cols=62 Identities=19% Similarity=0.267 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhh
Q 037750 3 KRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 3 ~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r 71 (160)
.+..++|+.||++|++++||.|+++|.+|+++++++....... ..+..+|+|.+|++||.++
T Consensus 36 ~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~~~-------~~~~~~p~l~~~~~~~~~~ 97 (100)
T cd03206 36 ARAHRLLRLLEEHLAGRDWLAGDRPTIADVAVYPYVALAPEGG-------VDLEDYPAIRRWLARIEAL 97 (100)
T ss_pred HHHHHHHHHHHHHHccCCccCCCCCCHHHHHHHHHHHHHhccC-------CChhhCcHHHHHHHHHHhC
Confidence 5678899999999999999999999999998887775321111 1245899999999999875
No 14
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=98.89 E-value=6.5e-09 Score=74.00 Aligned_cols=64 Identities=9% Similarity=0.115 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhh
Q 037750 3 KRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 3 ~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r 71 (160)
.++.++|+.||++|++++||+|+++|.+|+++++++..+.... ....+..+|+|.+|+++|.++
T Consensus 48 ~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~~~~~~-----~~~~~~~~p~l~~~~~~~~~~ 111 (118)
T cd03187 48 EKLKKVLDVYEARLSKSKYLAGDSFTLADLSHLPYLQYLMATP-----FAKLFDSRPHVKAWWEDISAR 111 (118)
T ss_pred HHHHHHHHHHHHHcccCcccCCCCccHHHHHHHHHHHHHHHcc-----chhhhhcCchHHHHHHHHHhC
Confidence 4678899999999999999999999999999887776543211 112346899999999999985
No 15
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=98.86 E-value=1.1e-08 Score=72.18 Aligned_cols=62 Identities=21% Similarity=0.247 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhh
Q 037750 3 KRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 3 ~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r 71 (160)
.++.+.+..||++|++++||+|+++|.+|++++..+..+..... .+.++|+|.+|++||.++
T Consensus 46 ~~~~~~l~~le~~l~~~~~l~G~~~t~aDi~~~~~~~~~~~~~~-------~~~~~p~l~~w~~~~~~~ 107 (114)
T cd03188 46 ERLAARLAYLDAQLAGGPYLLGDRFSVADAYLFVVLRWAPGVGL-------DLSDWPNLAAYLARVAAR 107 (114)
T ss_pred HHHHHHHHHHHHHhcCCCeeeCCCcchHHHHHHHHHHHHhhcCC-------ChhhChHHHHHHHHHHhC
Confidence 56788999999999988999999999999988877654322111 135899999999999874
No 16
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=98.85 E-value=1e-08 Score=74.42 Aligned_cols=63 Identities=17% Similarity=0.199 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhh
Q 037750 3 KRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 3 ~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r 71 (160)
....+.+..||++|++++||.|+++|.+|++++..+..+..... ..+..+|+|.+|++||.++
T Consensus 38 ~~~~~~l~~le~~L~~~~~l~G~~~T~aDi~l~~~~~~~~~~~~------~~~~~~P~l~~~~~rv~~~ 100 (121)
T cd03209 38 AKLPDKLKLFSDFLGDRPWFAGDKITYVDFLLYEALDQHRIFEP------DCLDAFPNLKDFLERFEAL 100 (121)
T ss_pred HHHHHHHHHHHHHhCCCCCcCCCCccHHHHHHHHHHHHHHHhCc------cccccChHHHHHHHHHHHC
Confidence 45678999999999999999999999999988877665443211 2356899999999999874
No 17
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=98.84 E-value=1.3e-08 Score=73.19 Aligned_cols=65 Identities=22% Similarity=0.156 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhhc
Q 037750 2 YKRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTEF 72 (160)
Q Consensus 2 ~~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r~ 72 (160)
..++.+.|+.|++.|++++||+|+++|.+|++++.++..+.. +... .+..+|+|.+|++||.++-
T Consensus 40 ~~~~~~~l~~le~~L~~~~~l~G~~~s~aDi~l~~~~~~~~~-~~~~-----~~~~~p~l~~w~~~~~~~p 104 (118)
T cd03177 40 LDKLEEALDFLETFLEGSDYVAGDQLTIADLSLVATVSTLEA-LLPL-----DLSKYPNVRAWLERLKALP 104 (118)
T ss_pred HHHHHHHHHHHHHHHccCCeeCCCCcCHHHHHHHHHHHHHHH-hcCC-----ChhhCchHHHHHHHHHccc
Confidence 357789999999999988999999999999998877765432 1110 1357999999999999853
No 18
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=98.84 E-value=9.9e-09 Score=72.45 Aligned_cols=64 Identities=16% Similarity=0.087 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhh
Q 037750 2 YKRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 2 ~~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r 71 (160)
.+.+.+.|+.|+++|++++|++|+++|.+|++++.++..+..... .....+|+|.+|++||.+|
T Consensus 37 ~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~~~~------~~~~~~p~l~~w~~~~~~r 100 (107)
T cd03186 37 RKELRESLLALAPVFAHKPYFMSEEFSLVDCALAPLLWRLPALGI------ELPKQAKPLKDYMERVFAR 100 (107)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCCCcHHHHHHHHHHHHHHHcCC------CCcccchHHHHHHHHHHCC
Confidence 356788999999999999999999999999988877532221111 1124799999999999886
No 19
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.84 E-value=9.6e-09 Score=74.51 Aligned_cols=65 Identities=22% Similarity=0.277 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhh
Q 037750 3 KRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 3 ~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r 71 (160)
+++.++|+.||++|++++|++|+++|.+|+++++.+..+...... ...+.++|+|.+|++||.++
T Consensus 44 ~~i~~~l~~le~~L~~~~yl~Gd~~tlADi~l~~~l~~~~~~~~~----~~~~~~~P~L~~w~~r~~~r 108 (115)
T cd03196 44 QQAEAFLKDLEARLQQHSYLLGDKPSLADWAIFPFVRQFAHVDPK----WFDQSPYPRLRRWLNGFLAS 108 (115)
T ss_pred HHHHHHHHHHHHHHccCCccCCCCccHHHHHHHHHHHHHHHhhhc----ccCcccCHHHHHHHHHHHcC
Confidence 578899999999999999999999999999888766533221100 01147899999999999875
No 20
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=98.84 E-value=1e-08 Score=70.03 Aligned_cols=63 Identities=22% Similarity=0.134 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHH
Q 037750 2 YKRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKL 68 (160)
Q Consensus 2 ~~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv 68 (160)
..++++.++.|+++|++++||+|++||.+|+++++++..+...... ...+..+|+|.+|+++|
T Consensus 38 ~~~~~~~~~~l~~~L~~~~~~~g~~~t~aDi~~~~~l~~~~~~~~~----~~~~~~~p~l~~~~~~~ 100 (100)
T cd00299 38 REELAAALAALEKLLAGRPYLAGDRFSLADIALAPVLARLDLLGPL----LGLLDEYPRLAAWYDRL 100 (100)
T ss_pred HHHHHHHHHHHHHHHccCCCCCCCCcCHHHHHHHHHHHHHHHhhhh----hhhhccCccHHHHHHhC
Confidence 3578899999999999999999999999999999888765543321 11356899999999985
No 21
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.81 E-value=1.6e-08 Score=70.89 Aligned_cols=61 Identities=16% Similarity=0.189 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhh
Q 037750 3 KRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 3 ~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r 71 (160)
.++.++++.||++|++++||+|+++|.+|++++..+..+... ..+..+|+|.+|++||.++
T Consensus 33 ~~~~~~l~~le~~l~~~~~l~g~~~t~aDi~~~~~~~~~~~~--------~~~~~~p~l~~w~~~~~~~ 93 (103)
T cd03207 33 GSYDDVLAALEQALAKGPYLLGERFTAADVLVGSPLGWGLQF--------GLLPERPAFDAYIARITDR 93 (103)
T ss_pred hhHHHHHHHHHHHHccCCcccCCccCHHHHHHHHHHHHHHHc--------CCCCCChHHHHHHHHHHcC
Confidence 568899999999999999999999999999888766643321 1245899999999999875
No 22
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=98.77 E-value=1.9e-08 Score=75.52 Aligned_cols=69 Identities=16% Similarity=0.178 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHH-HHHHhhChHHHHHHHHHHhh
Q 037750 3 KRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLL-KSKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 3 ~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l-~~~l~~~pnL~~y~eRv~~r 71 (160)
.++.+.|+.||++|++++||.|+++|++|+++++++..+.......... ...+..||+|.+|++||.++
T Consensus 40 ~~l~~~l~~LE~~L~~~~yl~Gd~~TlADi~l~~~l~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~ 109 (142)
T cd03190 40 DELFEALDRLEELLSDRRYLLGDRLTEADIRLFTTLIRFDAVYVQHFKCNLKRIRDYPNLWNYLRRLYQN 109 (142)
T ss_pred HHHHHHHHHHHHHHccCCeeeCCCccHHHHHHHHHHHHHHHHhhhhcccccchhhhCchHHHHHHHHhcC
Confidence 5678899999999999999999999999999888876442211000000 11246899999999999874
No 23
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=98.77 E-value=2.2e-08 Score=71.38 Aligned_cols=63 Identities=16% Similarity=0.115 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhh
Q 037750 3 KRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 3 ~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r 71 (160)
+++.++|..||++|++++|++|+++|.+|+.+++.+..+..... .....+|+|.+|++||.++
T Consensus 52 ~~l~~~l~~le~~L~~~~~l~gd~~t~aDi~l~~~~~~~~~~~~------~~~~~~p~l~~w~~~~~~~ 114 (117)
T cd03182 52 ARAADFLAYLDTRLAGSPYVAGDRFTIADITAFVGLDFAKVVKL------RVPEELTHLRAWYDRMAAR 114 (117)
T ss_pred HHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHhHHHHhcCC------CCccccHHHHHHHHHHHhc
Confidence 56788999999999988999999999999988877754332211 1135899999999999885
No 24
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=98.77 E-value=3.3e-08 Score=71.05 Aligned_cols=66 Identities=15% Similarity=0.212 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhh
Q 037750 2 YKRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 2 ~~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r 71 (160)
.+++.+.|+.|+++|+.++||+|+++|++|++++..+..+...... ...+..+|+|.+|.+||.++
T Consensus 42 ~~~~~~~l~~le~~l~~~~~l~G~~~siaDi~l~~~~~~~~~~~~~----~~~~~~~p~l~~w~~~~~~~ 107 (123)
T cd03181 42 LEELDRVLGVLEERLLKRTYLVGERLTLADIFVAGALLLGFTYVFD----KEWRAKYPNVTRWFNTVVNQ 107 (123)
T ss_pred HHHHHHHHHHHHHHHccCceeccCCccHHHHHHHHHHHHHHHHHcC----HHHHHhChHHHHHHHHHHcC
Confidence 3567889999999999999999999999999988877755332211 11356899999999999764
No 25
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=98.77 E-value=1.6e-08 Score=71.76 Aligned_cols=63 Identities=19% Similarity=0.230 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhh
Q 037750 3 KRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 3 ~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r 71 (160)
.+..+.++.||+.|++++||+|+++|.+|+++++++..+..... .....+|+|.+|.++|.++
T Consensus 43 ~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~~~~~~~------~~~~~~p~l~~w~~~~~~~ 105 (113)
T cd03178 43 NEAKRLYGVLDKRLAGRDYLAGDEYSIADIAIFPWVRRLEWIGI------DDLDDFPNVKRWLDRIAAR 105 (113)
T ss_pred HHHHHHHHHHHHHHccCCcccCCCCCeeeeeHHHHHHHHHhccc------cchhhchHHHHHHHHHhhC
Confidence 56788999999999999999999999999998877765543321 1245899999999999885
No 26
>PLN02473 glutathione S-transferase
Probab=98.73 E-value=4.6e-08 Score=77.04 Aligned_cols=65 Identities=12% Similarity=0.154 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhh
Q 037750 3 KRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 3 ~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r 71 (160)
++..++|+.||++|++++||+|+++|.+|+.+++.+..+.... .....+..+|+|.+|++||.++
T Consensus 138 ~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~~~~~~~~~~~~~----~~~~~~~~~P~l~~w~~~~~~~ 202 (214)
T PLN02473 138 VKFDKVLDVYENRLATNRYLGGDEFTLADLTHMPGMRYIMNET----SLSGLVTSRENLNRWWNEISAR 202 (214)
T ss_pred HHHHHHHHHHHHHhccCCcccCCCCCHHHHHHHHHHHHHHhcc----ccHHHHhcCHHHHHHHHHHhcC
Confidence 4667899999999998899999999999998877665433211 1223467999999999999875
No 27
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=98.72 E-value=5e-08 Score=71.46 Aligned_cols=63 Identities=17% Similarity=0.185 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHhhCC---CCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhh
Q 037750 3 KRASIAYRALSTRLGE---ESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 3 ~~a~~~L~aLe~~L~~---~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r 71 (160)
..+.+.|..|++.|++ ++||+|+++|.+|++++..+..+.... ...+..||+|.+|++||.++
T Consensus 38 ~~~~~~l~~le~~L~~~~~~~~l~G~~~T~ADi~l~~~~~~~~~~~------~~~~~~~P~l~~~~~rv~~~ 103 (126)
T cd03210 38 KDLPEQLKPFEKLLSKNNGKGFIVGDKISFADYNLFDLLDIHLVLA------PGCLDAFPLLKAFVERLSAR 103 (126)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeeeCCCccHHHHHHHHHHHHHHHhC------hHhhhcChHHHHHHHHHHhC
Confidence 4567899999999974 589999999999998887765443211 12357899999999999885
No 28
>PRK10387 glutaredoxin 2; Provisional
Probab=98.72 E-value=1.8e-08 Score=78.84 Aligned_cols=62 Identities=13% Similarity=0.063 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhhc
Q 037750 2 YKRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTEF 72 (160)
Q Consensus 2 ~~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r~ 72 (160)
.+++++.|+.|+++|++ +||+|++||.+|+.+++++..+..... +..+|||.+|++||.+|.
T Consensus 144 ~~~~~~~l~~le~~L~~-~~l~G~~~s~ADi~l~~~l~~~~~~~~--------~~~~p~l~~w~~r~~~r~ 205 (210)
T PRK10387 144 IKEINADLRALDPLIVK-PNAVNGELSTDDIHLFPILRNLTLVKG--------IEWPPRVADYRDNMSKKT 205 (210)
T ss_pred HHHHHHHHHHHHHHhcC-ccccCCCCCHHHHHHHHHHhcceeecC--------CCCCHHHHHHHHHHHHHh
Confidence 35788899999999987 999999999999999988875433211 224699999999999864
No 29
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=98.72 E-value=3.9e-08 Score=71.88 Aligned_cols=67 Identities=12% Similarity=0.030 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHhhCCC----------CccCCCCccHHhHHHHHHHHHHHHhccCchHHHH-HHhhChHHHHHHHHHHh
Q 037750 2 YKRASIAYRALSTRLGEE----------SFLFENRPSSVDAILLAHVLVTLHALPETSLLKS-KLLEHGNLVRYAEKLKT 70 (160)
Q Consensus 2 ~~~a~~~L~aLe~~L~~~----------~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~-~l~~~pnL~~y~eRv~~ 70 (160)
..++.++|+.||++|+++ +||+|+++|++|+++++.+..+...... ... ....+|||.+|++||.+
T Consensus 31 ~~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~~~~~~~---~~~~~~~~~P~l~~w~~rv~a 107 (111)
T cd03204 31 LDELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRLKFLGLS---RRYWGNGKRPNLEAYFERVLQ 107 (111)
T ss_pred HHHHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHHHHcCcc---ccccccccChHHHHHHHHHHc
Confidence 357889999999999765 4999999999999888777655432221 000 13479999999999998
Q ss_pred h
Q 037750 71 E 71 (160)
Q Consensus 71 r 71 (160)
|
T Consensus 108 R 108 (111)
T cd03204 108 R 108 (111)
T ss_pred C
Confidence 5
No 30
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=98.71 E-value=5e-08 Score=77.19 Aligned_cols=62 Identities=16% Similarity=0.138 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhh
Q 037750 3 KRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 3 ~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r 71 (160)
+++.++|..||.+|++++||+|+++|.+|+++++++..+..... .+.+||+|.+|++||.++
T Consensus 135 ~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~l~~~~~~~~~~~~-------~~~~~P~l~~w~~r~~~r 196 (215)
T PRK13972 135 VETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWTRQRI-------DLAMYPAVKNWHERIRSR 196 (215)
T ss_pred HHHHHHHHHHHHHhccCccccCCCCCHHHHHHHHHHHHHhhcCC-------cchhCHHHHHHHHHHHhC
Confidence 35677899999999989999999999999988776654432211 146899999999999875
No 31
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=98.71 E-value=5.3e-08 Score=70.12 Aligned_cols=62 Identities=19% Similarity=0.192 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHhhC--CCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhh
Q 037750 3 KRASIAYRALSTRLG--EESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 3 ~~a~~~L~aLe~~L~--~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r 71 (160)
+++.+.|..||++|+ .++||+|+++|.+|++++.++..+..... .+..+|+|.+|++||.++
T Consensus 47 ~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~~~~~~~~~~-------~~~~~p~l~~w~~~~~~~ 110 (121)
T cd03191 47 HWIARGFAALEKLLAQTAGKFCFGDEPTLADICLVPQVYNARRFGV-------DLSPYPTIARINEACLEL 110 (121)
T ss_pred HHHHHHHHHHHHHHHhcCCCeecCCcCCHHHHHHHHHHHHHHHhCC-------CcccCcHHHHHHHHHHhC
Confidence 457889999999997 45799999999999999877764433221 146899999999999875
No 32
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=98.71 E-value=2.6e-08 Score=71.91 Aligned_cols=69 Identities=19% Similarity=0.059 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHH-HHhhChHHHHHHHHHHhh
Q 037750 2 YKRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKS-KLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 2 ~~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~-~l~~~pnL~~y~eRv~~r 71 (160)
..+..+.++.|+++|++++||.|+++|.+|++++.++..+...... ..... ....+|+|.+|+++|.++
T Consensus 37 ~~~~~~~l~~le~~L~~~~~l~G~~~t~ADi~l~~~~~~~~~~~~~-~~~~~~~~~~~p~l~~w~~~~~~~ 106 (126)
T cd03185 37 KEEALEALKVLEEELGGKPFFGGDTIGYVDIALGSFLGWFRAYEEV-GGVKLLDEEKTPLLAAWAERFLEL 106 (126)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHHHHHHHHH-cCccccCcccCchHHHHHHHHHhc
Confidence 3567889999999999999999999999999888777654221100 00000 135799999999999873
No 33
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.70 E-value=4.5e-08 Score=68.26 Aligned_cols=60 Identities=18% Similarity=0.198 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHH
Q 037750 3 KRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLK 69 (160)
Q Consensus 3 ~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~ 69 (160)
.++++.++.|+++|++++||.|+++|.+|++++.++..+..... .+..+|+|.+|++||.
T Consensus 46 ~~~~~~l~~le~~L~~~~~l~g~~~slaDi~~~~~~~~~~~~~~-------~~~~~p~l~~~~~~~~ 105 (105)
T cd03179 46 ERGHAALAVLEAHLAGRDFLVGDALTIADIALAAYTHVADEGGF-------DLADYPAIRAWLARIE 105 (105)
T ss_pred HHHHHHHHHHHHHHccCccccCCCCCHHHHHHHHHHHhccccCC-------ChHhCccHHHHHHhhC
Confidence 56788999999999989999999999999988876654322111 1468999999999974
No 34
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=98.69 E-value=5.5e-08 Score=72.77 Aligned_cols=62 Identities=19% Similarity=0.217 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHhhC--CCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhh
Q 037750 4 RASIAYRALSTRLG--EESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 4 ~a~~~L~aLe~~L~--~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r 71 (160)
.+.+.|+.||++|+ +++||.|+++|.+|++++..+..+.... ...+..+|+|.+|++||.++
T Consensus 43 ~~~~~l~~lE~~L~~~~~~~l~G~~~T~ADi~l~~~l~~~~~~~------~~~l~~~P~l~~~~~rv~~~ 106 (137)
T cd03208 43 AKNRYFPVFEKVLKSHGQDFLVGNKLSRADIHLLEAILMVEELD------PSLLSDFPLLQAFKTRISNL 106 (137)
T ss_pred HHHHHHHHHHHHHHhCCCCeeeCCCCCHHHHHHHHHHHHHHHhc------hhhhccChHHHHHHHHHHcC
Confidence 44689999999998 6789999999999999887776443221 12467899999999999874
No 35
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=98.69 E-value=6.1e-08 Score=70.28 Aligned_cols=63 Identities=14% Similarity=0.149 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHh-hCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhh
Q 037750 3 KRASIAYRALSTR-LGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 3 ~~a~~~L~aLe~~-L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r 71 (160)
++..+++..||++ +++++|++|+++|.+|++++..+........ ..+..+|+|.+|++||.++
T Consensus 48 ~~~~~~l~~le~~l~~~~~~l~Gd~~t~ADi~l~~~~~~~~~~~~------~~~~~~p~l~~w~~~~~~~ 111 (126)
T cd03183 48 ENLEESLDLLENYFLKDKPFLAGDEISIADLSAVCEIMQPEAAGY------DVFEGRPKLAAWRKRVKEA 111 (126)
T ss_pred HHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHhcCC------cccccCchHHHHHHHHHHh
Confidence 4678899999997 4557899999999999988866543322211 1246899999999999995
No 36
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=98.66 E-value=8.7e-08 Score=67.70 Aligned_cols=58 Identities=19% Similarity=0.271 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHh
Q 037750 3 KRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKT 70 (160)
Q Consensus 3 ~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~ 70 (160)
.+..++++.|+++|++++|+.|+++|++|+++++.+. +... ....+|||.+|++||.+
T Consensus 38 ~~~~~~l~~le~~L~~~~fl~Gd~~tiADi~l~~~l~---~~~~-------~~~~~p~l~~w~~r~~~ 95 (96)
T cd03200 38 KEKAAVLRALNSALGRSPWLVGSEFTVADIVSWCALL---QTGL-------ASAAPANVQRWLKSCEN 95 (96)
T ss_pred HHHHHHHHHHHHHHcCCCccCCCCCCHHHHHHHHHHH---Hccc-------ccccChHHHHHHHHHHh
Confidence 3566899999999999999999999999998886654 2111 13579999999999986
No 37
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=98.66 E-value=5.9e-08 Score=68.00 Aligned_cols=61 Identities=18% Similarity=0.178 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHhhCC--CCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHH
Q 037750 3 KRASIAYRALSTRLGE--ESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKL 68 (160)
Q Consensus 3 ~~a~~~L~aLe~~L~~--~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv 68 (160)
..+.++++.|+++|++ ++||+|+++|.+|++++.++..+..... .. .+..+|+|.+|++||
T Consensus 42 ~~~~~~l~~le~~l~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~---~~--~~~~~p~l~~~~~~~ 104 (104)
T cd03192 42 EAIPKYLKKLEKILKENGGGYLVGDKLTWADLVVFDVLDYLLYLDP---KL--LLKKYPKLKALRERV 104 (104)
T ss_pred HhhHHHHHHHHHHHHHcCCCeeeCCCccHHHHHHHHHHHHHHhhCc---hh--hHHhChhHHHHHHhC
Confidence 4577899999999987 8999999999999999888765433221 11 256899999999985
No 38
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=98.65 E-value=5.8e-08 Score=71.33 Aligned_cols=66 Identities=21% Similarity=0.147 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHhhCC-CCccCCCCccHHhHHHHHHHHHHHHhccCchHHHH--HHhhChHHHHHHHHHHhh
Q 037750 3 KRASIAYRALSTRLGE-ESFLFENRPSSVDAILLAHVLVTLHALPETSLLKS--KLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 3 ~~a~~~L~aLe~~L~~-~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~--~l~~~pnL~~y~eRv~~r 71 (160)
+++.+.|..|++.|++ ++||+|+++|++|++++.++..+.+... .... ....+|+|.+|++||.+|
T Consensus 33 ~~l~~~l~~Le~~L~~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~---~~~~~~~~~~~P~l~~w~~rl~~r 101 (121)
T cd03201 33 QALLDELEALEDHLKENGPFINGEKISAVDLSLAPKLYHLEIALG---HYKNWSVPESLTSVKSYMKALFSR 101 (121)
T ss_pred HHHHHHHHHHHHHHhcCCCccCCCCCCHHhHHHHHHHHHHHHHHH---HhcCCCCcccchHHHHHHHHHHCC
Confidence 5677889999999984 7999999999999988887654433210 0011 126899999999999874
No 39
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=98.64 E-value=4.2e-08 Score=71.50 Aligned_cols=69 Identities=14% Similarity=0.102 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHhhCC--CCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhh
Q 037750 2 YKRASIAYRALSTRLGE--ESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 2 ~~~a~~~L~aLe~~L~~--~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r 71 (160)
.+++.+.|+.||+.|++ ++||.|+++|++|+++++++..+....... .....+..+|+|.+|++||.++
T Consensus 34 ~~~~~~~l~~le~~L~~~~~~yl~G~~~t~aDi~~~~~~~~~~~~~~~~-~~~~~~~~~p~l~~w~~r~~~~ 104 (124)
T cd03184 34 KAELRSALENLEEELTKRGTPFFGGDSPGMVDYMIWPWFERLEALKLLL-GYEFPLDRFPKLKKWMDAMKED 104 (124)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcCCCCccHHHHHhhHHHHHHHHHHhhc-cccCCcccChHHHHHHHHhccC
Confidence 35678899999999985 799999999999998887776443322100 0001246899999999999874
No 40
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=98.63 E-value=6.9e-08 Score=72.81 Aligned_cols=68 Identities=18% Similarity=0.139 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHhhCC----------------CCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHH
Q 037750 3 KRASIAYRALSTRLGE----------------ESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAE 66 (160)
Q Consensus 3 ~~a~~~L~aLe~~L~~----------------~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~e 66 (160)
.++.+.|+.|+.+|++ ++|++|+++|.+||.+++.+..+-........+ ....++|+|.+|++
T Consensus 32 ~~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~~~~~~~~~g~-~i~~~~P~L~aw~~ 110 (134)
T cd03198 32 KGLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNF-EIPADLTGLWRYLK 110 (134)
T ss_pred HHHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCC-CccccCHHHHHHHH
Confidence 4678899999999986 789999999999999998876442110000000 11368999999999
Q ss_pred HHHhh
Q 037750 67 KLKTE 71 (160)
Q Consensus 67 Rv~~r 71 (160)
||.+|
T Consensus 111 ri~aR 115 (134)
T cd03198 111 NAYQR 115 (134)
T ss_pred HHHCC
Confidence 99976
No 41
>PRK10542 glutathionine S-transferase; Provisional
Probab=98.57 E-value=1.6e-07 Score=73.06 Aligned_cols=62 Identities=13% Similarity=0.214 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhh
Q 037750 3 KRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 3 ~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r 71 (160)
+++.+.|..||.+|++++||+|+++|.+|+.++.++........ .+..+|+|.+|++||.++
T Consensus 127 ~~~~~~l~~le~~L~~~~~l~G~~~s~ADi~l~~~~~~~~~~~~-------~~~~~p~l~~w~~~~~~~ 188 (201)
T PRK10542 127 AQLEKKFQYVDEALADEQWICGQRFTIADAYLFTVLRWAYAVKL-------NLEGLEHIAAYMQRVAER 188 (201)
T ss_pred HHHHHHHHHHHHHhcCCCeeeCCCCcHHhHHHHHHHHHhhccCC-------CcccchHHHHHHHHHHcC
Confidence 46778999999999999999999999999988877654322111 145799999999999875
No 42
>PLN02395 glutathione S-transferase
Probab=98.57 E-value=1.9e-07 Score=73.43 Aligned_cols=65 Identities=9% Similarity=0.090 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhh
Q 037750 3 KRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 3 ~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r 71 (160)
+++.+.++.||.+|++++||+|+++|.+|+.++.++..+.. ... ....+..+|+|.+|++||.++
T Consensus 137 ~~~~~~l~~le~~L~~~~~l~G~~~s~ADi~l~~~~~~~~~-~~~---~~~~~~~~p~L~~w~~~~~~r 201 (215)
T PLN02395 137 EKLAKVLDVYEARLSKSKYLAGDFVSLADLAHLPFTEYLVG-PIG---KAYLIKDRKHVSAWWDDISSR 201 (215)
T ss_pred HHHHHHHHHHHHHhcCCccccCCCcCHHHHHHHHHHHHHhc-ccc---hhhhhccCchHHHHHHHHHcC
Confidence 45678899999999988999999999999988877654322 111 112356899999999999885
No 43
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=98.53 E-value=2.5e-07 Score=72.36 Aligned_cols=61 Identities=23% Similarity=0.188 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHhhCC--CCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhh
Q 037750 4 RASIAYRALSTRLGE--ESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 4 ~a~~~L~aLe~~L~~--~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r 71 (160)
++.+.|+.||++|++ ++||+|+++|.+|+.++..+..+..... .+..||+|.+|++||.++
T Consensus 133 ~~~~~l~~le~~L~~~~~~~l~G~~~T~ADi~~~~~l~~~~~~~~-------~~~~~p~l~~~~~~~~~r 195 (210)
T TIGR01262 133 WISKGFAALEALLQPHAGAFCVGDTPTLADLCLVPQVYNAERFGV-------DLTPYPTLRRIAAALAAL 195 (210)
T ss_pred HHHHHHHHHHHHHhcCCCCEeeCCCCCHHHHHHHHHHHHHHHcCC-------CcccchHHHHHHHHHhcC
Confidence 467889999999986 3599999999999999887764432211 146899999999999886
No 44
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=98.53 E-value=2.3e-07 Score=73.38 Aligned_cols=63 Identities=16% Similarity=0.104 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHH-hhChHHHHHHHHHHhh
Q 037750 3 KRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKL-LEHGNLVRYAEKLKTE 71 (160)
Q Consensus 3 ~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l-~~~pnL~~y~eRv~~r 71 (160)
.++.+.+..|+++|++++||+|+++|.+|++++.++..+..... ... ..+|+|.+|++||.++
T Consensus 130 ~~l~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~~~~~~~~~~------~~~~~~~p~l~~w~~~~~~r 193 (211)
T PRK09481 130 KQLREELLAIAPVFGEKPYFMSEEFSLVDCYLAPLLWRLPVLGI------ELSGPGAKELKGYMTRVFER 193 (211)
T ss_pred HHHHHHHHHHHHHhccCCcccCCCccHHHHHHHHHHHHHHhcCC------CCCCCCChhHHHHHHHHhcc
Confidence 45677889999999999999999999999998877754432221 112 4789999999999875
No 45
>PTZ00057 glutathione s-transferase; Provisional
Probab=98.48 E-value=3.3e-07 Score=72.29 Aligned_cols=63 Identities=8% Similarity=-0.058 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHhhCCC--CccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhh
Q 037750 3 KRASIAYRALSTRLGEE--SFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 3 ~~a~~~L~aLe~~L~~~--~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r 71 (160)
+.+.+.|..||++|+++ +||.|+++|.+|++++..+..+.. .. ...+..+|+|.+|++||.++
T Consensus 126 ~~~~~~l~~le~~L~~~~~~~l~Gd~~T~AD~~l~~~~~~~~~-~~-----~~~l~~~P~l~~~~~r~~~~ 190 (205)
T PTZ00057 126 EELPKWSGYFENILKKNHCNYFVGDNLTYADLAVFNLYDDIET-KY-----PNSLKNFPLLKAHNEFISNL 190 (205)
T ss_pred HHHHHHHHHHHHHHHhCCCCeeeCCcccHHHHHHHHHHHHHHH-hC-----hhhhccChhHHHHHHHHHhC
Confidence 46778899999999754 799999999999988876654322 11 23467899999999999874
No 46
>PRK11752 putative S-transferase; Provisional
Probab=98.44 E-value=4.5e-07 Score=74.74 Aligned_cols=68 Identities=10% Similarity=0.109 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhc-cCchHHHHHHhhChHHHHHHHHHHhh
Q 037750 3 KRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHAL-PETSLLKSKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 3 ~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~-~~~~~l~~~l~~~pnL~~y~eRv~~r 71 (160)
.+..+.|+.||++|++++||+|+++|.+|+++++++..+.... ...... ..+..||+|.+|++||.++
T Consensus 181 ~~~~~~L~~le~~L~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~-~~~~~~P~L~~w~~rv~~r 249 (264)
T PRK11752 181 MEAKRQLDVLDKQLAEHEYIAGDEYTIADIAIWPWYGNLVLGNLYDAAEF-LDVGSYKHVQRWAKEIAER 249 (264)
T ss_pred HHHHHHHHHHHHHhccCCCCCCCccCHHHHHHHHHHHHHhhccccccccc-cCcccCHHHHHHHHHHHhC
Confidence 3567889999999998899999999999999987765443210 000000 0145899999999999986
No 47
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.43 E-value=6.7e-07 Score=70.43 Aligned_cols=64 Identities=14% Similarity=0.085 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhhcc
Q 037750 3 KRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTEFV 73 (160)
Q Consensus 3 ~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r~~ 73 (160)
++..+.++.++..|++++|++|+++|++|+.++.++..+..... .+..+|+|.+|++||.++-.
T Consensus 134 ~~~~~~l~~le~~L~~~~~l~G~~~tiAD~~~~~~~~~~~~~~~-------~~~~~p~l~~w~~r~~~rp~ 197 (211)
T COG0625 134 AEIRALLALLEALLADGPYLAGDRFTIADIALAPLLWRLALLGE-------ELADYPALKAWYERVLARPA 197 (211)
T ss_pred HHHHHHHHHHHHHhccCCcccCCCCCHHHHHHHHHHHHhhhcCc-------ccccChHHHHHHHHHHcCCc
Confidence 46788999999999999999999999999988877764322221 12679999999999986543
No 48
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=98.39 E-value=9.2e-07 Score=64.43 Aligned_cols=67 Identities=18% Similarity=0.144 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHhhC---CCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhh
Q 037750 3 KRASIAYRALSTRLG---EESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 3 ~~a~~~L~aLe~~L~---~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r 71 (160)
+++.+.++.|++.|+ +++||.| ++|++|+.+++++..+.......... ....++|||.+|++||.++
T Consensus 33 ~~~~~~l~~Le~~L~~~~~~~fl~G-~~tlADi~l~~~~~~~~~~~~~~~~~-~~~~~~P~l~~W~~~~~~r 102 (120)
T cd03203 33 AEAAAALDYIENALSKFDDGPFFLG-QFSLVDIAYVPFIERFQIFLSELFNY-DITEGRPNLAAWIEEMNKI 102 (120)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcCC-CccHHHHHHHHHHHHHHHHHHHhcCc-cccccCcHHHHHHHHHhcc
Confidence 356788999999997 4899999 99999998887775332100000001 1225899999999999875
No 49
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.36 E-value=1.7e-06 Score=62.51 Aligned_cols=59 Identities=15% Similarity=0.005 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHhhC-CCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhh
Q 037750 3 KRASIAYRALSTRLG-EESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 3 ~~a~~~L~aLe~~L~-~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r 71 (160)
+.+++++..|+.+|+ +++||+| ++|.+|++++..+..+..... .+ . |+|.+|++||.+|
T Consensus 45 ~~~~~~~~~le~~l~~~~~~l~G-~fSiAD~~l~~~~~~~~~~g~-------~l-~-p~l~ay~~r~~~r 104 (114)
T cd03195 45 AAAEKLIAVAEALLPPGAANLFG-EWCIADTDLALMLNRLVLNGD-------PV-P-ERLRDYARRQWQR 104 (114)
T ss_pred HHHHHHHHHHHHHHhcCCCcccC-CccHHHHHHHHHHHHHHHcCC-------CC-C-HHHHHHHHHHHCC
Confidence 456889999999995 5589999 599999988766653332221 12 3 9999999999986
No 50
>PLN02378 glutathione S-transferase DHAR1
Probab=98.35 E-value=1.1e-06 Score=69.86 Aligned_cols=65 Identities=23% Similarity=0.213 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHhhC--CCCccCCCCccHHhHHHHHHHHHHHHhccCchHHH--HHHhhChHHHHHHHHHHhh
Q 037750 4 RASIAYRALSTRLG--EESFLFENRPSSVDAILLAHVLVTLHALPETSLLK--SKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 4 ~a~~~L~aLe~~L~--~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~--~~l~~~pnL~~y~eRv~~r 71 (160)
.+.+.|..||++|+ +++||+|+++|.+|+.+++++..+..... ... ....++|+|.+|++||.++
T Consensus 122 ~~~~~l~~le~~L~~~~~~fl~Gd~~T~ADi~l~~~~~~l~~~~~---~~~~~~~~~~~p~l~~w~~~~~~r 190 (213)
T PLN02378 122 ALLVELEALENHLKSHDGPFIAGERVSAVDLSLAPKLYHLQVALG---HFKSWSVPESFPHVHNYMKTLFSL 190 (213)
T ss_pred HHHHHHHHHHHHHhcCCCCCcCCCCCchhhHHHHHHHHHHHHHHH---HhcCCCchhHhHHHHHHHHHHhcC
Confidence 45678999999997 46899999999999999988764332110 000 1246899999999999973
No 51
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.33 E-value=2e-06 Score=60.10 Aligned_cols=59 Identities=14% Similarity=0.113 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHH
Q 037750 3 KRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKL 68 (160)
Q Consensus 3 ~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv 68 (160)
.++.++|..||++|++++| +++|++|+.++..+..+....... ..+.++|+|.+|.+||
T Consensus 40 ~~~~~~l~~le~~L~~~~~---d~~TlADi~l~~~l~~~~~~~~~~----~~~~~~p~l~~w~~rm 98 (98)
T cd03205 40 GKIERALDALEAELAKLPL---DPLDLADIAVACALGYLDFRHPDL----DWRAAHPALAAWYARF 98 (98)
T ss_pred HHHHHHHHHHHHhhhhCCC---CCCCHHHHHHHHHHHHHHhHccCc----chhhhChHHHHHHHhC
Confidence 5678899999999998888 899999998887776554322211 1246899999999986
No 52
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=98.31 E-value=1.4e-06 Score=67.95 Aligned_cols=53 Identities=28% Similarity=0.379 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHhhCCC---CccCCCC-ccHHhHHHHHHHHHHHHhccCchHHHHHH
Q 037750 3 KRASIAYRALSTRLGEE---SFLFENR-PSSVDAILLAHVLVTLHALPETSLLKSKL 55 (160)
Q Consensus 3 ~~a~~~L~aLe~~L~~~---~yl~Gd~-pT~aDa~l~~~l~~ll~~~~~~~~l~~~l 55 (160)
..+.+|+..|+++|++. .|++|+. ||++||++|||+..++...+|++.++.+|
T Consensus 111 ~~a~~~l~~L~~~L~~~~~~~~~f~~~~psslD~L~~ayL~l~l~p~LP~~~l~~~L 167 (168)
T PF11801_consen 111 KLAMECLSLLEELLGEWEEARYFFGDSKPSSLDCLAFAYLALLLVPELPDPFLRDHL 167 (168)
T ss_pred HHHHHHHHHHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHhcccCCcHHHHHHh
Confidence 45889999999999999 9999997 99999999999999887777776666655
No 53
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=98.30 E-value=1.1e-06 Score=69.72 Aligned_cols=60 Identities=7% Similarity=0.077 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhCh-HHHHHHHHHHhhc
Q 037750 3 KRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHG-NLVRYAEKLKTEF 72 (160)
Q Consensus 3 ~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~p-nL~~y~eRv~~r~ 72 (160)
+.+++.|+.|+++|++++|+.| ++|++|+.+++++..+.... .+ .+| ||.+|++||.++.
T Consensus 144 ~~~~~~l~~le~~L~~~~~l~g-~~TiADi~l~~~l~~~~~~~--------~~-~~p~~l~~w~~Ri~ar~ 204 (209)
T TIGR02182 144 EEINADLEELDKLIDGPNAVNG-ELSEDDILVFPLLRNLTLVA--------GI-NWPSRVADYLDNMSKKS 204 (209)
T ss_pred HHHHHHHHHHHHHHhCccccCC-CCCHHHHHHHHHhcCeeeec--------CC-CCChHHHHHHHHHHHHh
Confidence 4678899999999999999965 69999999998876322111 01 356 9999999999874
No 54
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.29 E-value=4.2e-06 Score=60.54 Aligned_cols=58 Identities=19% Similarity=0.067 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHhh---CCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhh
Q 037750 4 RASIAYRALSTRL---GEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 4 ~a~~~L~aLe~~L---~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r 71 (160)
...+++..++.+| ++++||+|+ +|.+|+++++.+..+.... +...|+|.+|++||.++
T Consensus 45 ~~~~~~~~le~~l~~~~~~~yl~Gd-~T~ADi~l~~~~~~~~~~~---------~~~~P~l~~~~~rv~~r 105 (114)
T cd03194 45 DIARIEAIWAECLARFQGGPFLFGD-FSIADAFFAPVVTRFRTYG---------LPLSPAAQAYVDALLAH 105 (114)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCC-CcHHHHHHHHHHHHHHHcC---------CCCCHHHHHHHHHHHCC
Confidence 3456666666665 467899999 9999998887765443211 11139999999999875
No 55
>PRK10357 putative glutathione S-transferase; Provisional
Probab=98.22 E-value=4.8e-06 Score=64.92 Aligned_cols=64 Identities=14% Similarity=0.074 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhh
Q 037750 3 KRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 3 ~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r 71 (160)
.++.+.|..||++|++++ |+|+++|.+|+.++.++..+...... ...+..+|+|.+|++||.+|
T Consensus 128 ~~l~~~l~~le~~L~~~~-l~Gd~~t~ADi~l~~~l~~~~~~~~~----~~~~~~~p~l~~~~~~i~~r 191 (202)
T PRK10357 128 EKINRSLDALEGYLVDGT-LKTDTVNLATIAIACAVGYLNFRRVA----PGWCVDRPHLVKLVENLFQR 191 (202)
T ss_pred HHHHHHHHHHHHhhccCc-ccCCCcCHHHHHHHHHHHHHHhcccC----cchhhcChHHHHHHHHHhcC
Confidence 457788999999998888 99999999999888776533221110 11245799999999999985
No 56
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=98.16 E-value=4.1e-06 Score=69.50 Aligned_cols=66 Identities=15% Similarity=0.044 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHhhCC-CCccCCCCccHHhHHHHHHHHHHHHhccCchHHH--HHHhhChHHHHHHHHHHhh
Q 037750 3 KRASIAYRALSTRLGE-ESFLFENRPSSVDAILLAHVLVTLHALPETSLLK--SKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 3 ~~a~~~L~aLe~~L~~-~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~--~~l~~~pnL~~y~eRv~~r 71 (160)
++..+.|..||++|++ ++||+|+++|.+|++++.++..+..... ... .....+|+|.+|++||.++
T Consensus 174 ~~l~~~l~~LE~~L~~~g~yl~Gd~~SlADi~l~p~L~~l~~~~~---~~~~~~i~~~~P~L~~w~~ri~~r 242 (265)
T PLN02817 174 QALLDELTSFDDYIKENGPFINGEKISAADLSLGPKLYHLEIALG---HYKNWSVPDSLPFVKSYMKNIFSM 242 (265)
T ss_pred HHHHHHHHHHHHHHhcCCCeeCCCCCCHHHHHHHHHHHHHHHHHH---HhcCCCccccCHHHHHHHHHHhcc
Confidence 3456789999999974 6899999999999999988764432210 000 1135899999999999883
No 57
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=98.16 E-value=4.2e-06 Score=68.49 Aligned_cols=65 Identities=17% Similarity=0.145 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHhhC------------------CCCccCCCCccHHhHHHHHHHHHHHHhccCchHHH--HHHhhChHHHH
Q 037750 4 RASIAYRALSTRLG------------------EESFLFENRPSSVDAILLAHVLVTLHALPETSLLK--SKLLEHGNLVR 63 (160)
Q Consensus 4 ~a~~~L~aLe~~L~------------------~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~--~~l~~~pnL~~ 63 (160)
++.+.|+.|++.|+ +++||.|+++|++||.++..+..+-.... ... .+..++|+|.+
T Consensus 127 ~l~~~l~~Le~~L~~~~~~~~~~~~~~~~~~~~~~f~~Gd~~tlaD~~l~p~l~~l~~~~~---~~~~~~i~~~~p~l~~ 203 (236)
T TIGR00862 127 GLLKALKKLDDYLNSPLPEEIDEDSAEDEKVSRRKFLDGDELTLADCNLLPKLHIVKVVAK---KYRNFDIPAEFTGVWR 203 (236)
T ss_pred HHHHHHHHHHHHHhccccccccccccccccccCCCcccCCccchhhHHHHHHHHHHHHHHH---HHhCcCccccCchHHH
Confidence 47789999999996 57999999999999999888764432100 000 12468999999
Q ss_pred HHHHHHhh
Q 037750 64 YAEKLKTE 71 (160)
Q Consensus 64 y~eRv~~r 71 (160)
|++||.++
T Consensus 204 w~~~~~~~ 211 (236)
T TIGR00862 204 YLSNAYAR 211 (236)
T ss_pred HHHHHhcc
Confidence 99999874
No 58
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=98.11 E-value=8.5e-06 Score=62.55 Aligned_cols=52 Identities=12% Similarity=0.155 Sum_probs=40.3
Q ss_pred hhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhh
Q 037750 15 RLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 15 ~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r 71 (160)
..++++|+.|++||+||+.+|+.+..+-... .++ .+.++|||.+|++||++.
T Consensus 95 ~~~~~~FlaGd~ptIADisvyg~l~s~e~~~----~~~-Dl~~~p~I~~W~eRm~~~ 146 (149)
T cd03197 95 LGKDRQFHGGSKPNLADLAVYGVLRSVEGHP----AFK-DMVEETKIGEWYERMDAA 146 (149)
T ss_pred hcCCCCccCCCCCCHHHHHHHHHHHHHHHhc----ccc-chhhCcCHHHHHHHHHHH
Confidence 3346689999999999999999987654432 121 255899999999999874
No 59
>PLN02907 glutamate-tRNA ligase
Probab=98.03 E-value=9.9e-06 Score=75.73 Aligned_cols=64 Identities=17% Similarity=0.162 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHH--HHhccCchHHHHHHhhChHHHHHHHHHHhhcc
Q 037750 4 RASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVT--LHALPETSLLKSKLLEHGNLVRYAEKLKTEFV 73 (160)
Q Consensus 4 ~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~l--l~~~~~~~~l~~~l~~~pnL~~y~eRv~~r~~ 73 (160)
...++|+.|+.+|++++||+|+++|+||+++++.+... .+... ..+..||||.+|+++|.++.-
T Consensus 94 ~l~~~L~~LE~~L~~rtYLvGd~lTLADIaL~~~L~~~~~~~~~~------~~~~~yPnL~RW~erI~arPs 159 (722)
T PLN02907 94 EFENACEYVDGYLASRTFLVGYSLTIADIAIWSGLAGSGQRWESL------RKSKKYQNLVRWFNSISAEYS 159 (722)
T ss_pred HHHHHHHHHHHHhccCCeecCCCCCHHHHHHHHHHHhhhhhhhcc------cccccCHHHHHHHHHHHhCCC
Confidence 45678999999999999999999999999998777543 11110 124689999999999998744
No 60
>PRK15113 glutathione S-transferase; Provisional
Probab=97.91 E-value=3.6e-05 Score=60.95 Aligned_cols=59 Identities=15% Similarity=0.034 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHhhCC-CCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhh
Q 037750 3 KRASIAYRALSTRLGE-ESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 3 ~~a~~~L~aLe~~L~~-~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r 71 (160)
+++.+.++.|+++|++ ++|++|+ +|.+|++++.++..+..... .+ .|+|.+|++||.++
T Consensus 140 ~~~~~~l~~le~~L~~~~~~l~G~-~TlADi~l~~~l~~~~~~~~-------~~--~p~l~~~~~r~~~r 199 (214)
T PRK15113 140 AAAEKLFAVAERLLAPGQPNLFGE-WCIADTDLALMLNRLVLHGD-------EV--PERLADYATFQWQR 199 (214)
T ss_pred HHHHHHHHHHHHHHhcCCCEeeCC-ccHHHHHHHHHHHHHHHcCC-------CC--CHHHHHHHHHHhcC
Confidence 5678899999999974 4799996 99999988877764332211 11 28999999999864
No 61
>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.88 E-value=1.6e-05 Score=65.06 Aligned_cols=66 Identities=18% Similarity=0.228 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHhhC-CCCccCCCCccHHhHHHHHHHHHHHHhccCchHHH--HHH--hhChHHHHHHHHHHhh
Q 037750 3 KRASIAYRALSTRLG-EESFLFENRPSSVDAILLAHVLVTLHALPETSLLK--SKL--LEHGNLVRYAEKLKTE 71 (160)
Q Consensus 3 ~~a~~~L~aLe~~L~-~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~--~~l--~~~pnL~~y~eRv~~r 71 (160)
.++.++|..||+.|+ +++||+|++++.+|+++...+..++.... .+. .++ .++|+|.+|++||.++
T Consensus 132 ~e~~e~l~~lE~el~k~k~~fgG~~~G~vDi~~~p~~~~~~~~~~---~~~~~~~~~~~~~P~L~~W~~~~~~~ 202 (231)
T KOG0406|consen 132 EELREALKVLEEELGKGKDFFGGETIGFVDIAIGPSFERWLAVLE---KFGGVKFIIEEETPKLIKWIKRMKED 202 (231)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCcCHhhhhHHhhHHHHHHHHH---HhcCcccCCCCCCccHHHHHHHHhcC
Confidence 457899999999999 89999999999999988756665555432 111 233 3899999999999874
No 62
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.73 E-value=0.00012 Score=59.13 Aligned_cols=65 Identities=12% Similarity=0.146 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhh
Q 037750 3 KRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 3 ~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r 71 (160)
.+++++++.+|++|.++.|+.|+++|++|+.+.+-+..+.... .......++|++.+|++++.++
T Consensus 136 ~~~~~~~~~~e~~l~~~~yl~g~~~tlADl~~~~~~~~~~~~~----~~~~~~~~~p~v~~W~~~~~~~ 200 (226)
T KOG0867|consen 136 AKLRKALDNLERFLKTQVYLAGDQLTLADLSLASTLSQFQGKF----ATEKDFEKYPKVARWYERIQKR 200 (226)
T ss_pred HHHHHHHHHHHHHHccCCcccCCcccHHHHHHhhHHHHHhHhh----hhhhhhhhChHHHHHHHHHHhC
Confidence 5788999999999999999999999999998877776553111 1133456999999999999996
No 63
>KOG4420 consensus Uncharacterized conserved protein (Ganglioside-induced differentiation associated protein 1, GDAP1) [Function unknown]
Probab=97.66 E-value=9.6e-05 Score=61.62 Aligned_cols=68 Identities=22% Similarity=0.172 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHhhCC----CCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHh--hChHHHHHHHHHHhhcc
Q 037750 2 YKRASIAYRALSTRLGE----ESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLL--EHGNLVRYAEKLKTEFV 73 (160)
Q Consensus 2 ~~~a~~~L~aLe~~L~~----~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~--~~pnL~~y~eRv~~r~~ 73 (160)
.......|+.+|+.|.. ..||+|+.+|.+|+.+...|.-+...-+. ++... +.|||..|++|++.|.-
T Consensus 207 ld~l~~~Ld~VEteLe~r~~~~~wL~G~efslADVsLg~~LhRL~~Lg~e----~~yw~~gsrpnle~Yf~rvrrR~s 280 (325)
T KOG4420|consen 207 LDELAMVLDQVETELEKRKLCELWLCGCEFSLADVSLGATLHRLKFLGLE----KKYWEDGSRPNLESYFERVRRRFS 280 (325)
T ss_pred HHHHHHHHHHHHHHHhhccccceeeccccchHHHHHHHHHHHHHHHcccH----HHhcccCCCccHHHHHHHHHhhhH
Confidence 45677888999999977 68999999999999777666655444332 34554 78999999999998753
No 64
>KOG1695 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.33 E-value=0.00056 Score=55.13 Aligned_cols=62 Identities=18% Similarity=0.244 Sum_probs=48.2
Q ss_pred HHHHHHHHHHhhC--CCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhh
Q 037750 5 ASIAYRALSTRLG--EESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 5 a~~~L~aLe~~L~--~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r 71 (160)
....+..++..|. .+.||+||+.|.+|..++.++..+.....+ ..+..+|+|.+|.+||.+.
T Consensus 128 ~~~~~~~~~~~L~~~~sgflvGd~lT~aDl~i~e~l~~l~~~~~~-----~~~~~~P~L~a~~~kv~~~ 191 (206)
T KOG1695|consen 128 KPKYFKILEKILKKNKSGFLVGDKLTWADLVIAEHLDTLEELLDP-----SALDHFPKLKAFKERVSSI 191 (206)
T ss_pred hHHHHHHHHHHHHhCCCCeeecCcccHHHHHHHHHHHHHHHhcCc-----hhhccChHHHHHHHHHhcC
Confidence 4567788899987 557999999999999999998877663211 3456789999998888763
No 65
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.81 E-value=0.00066 Score=57.08 Aligned_cols=67 Identities=19% Similarity=0.198 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccC--chHHHHHHhhChHHHHHHHHHHh
Q 037750 3 KRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPE--TSLLKSKLLEHGNLVRYAEKLKT 70 (160)
Q Consensus 3 ~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~--~~~l~~~l~~~pnL~~y~eRv~~ 70 (160)
.+.-+.|+.||.+|++++||+|++.|.+|+-+|.-|.-+--.-.. ...++ .+..||||..|...+-.
T Consensus 208 ~~lF~~Ld~lE~~L~~~ryl~Gd~lTEAD~RLftTlvRFD~VYvgHFKCN~~-rI~dypnL~~yLr~LYq 276 (324)
T COG0435 208 KKLFEALDKLEQILSERRYLTGDQLTEADIRLFTTLVRFDPVYVGHFKCNLR-RIRDYPNLWGYLRDLYQ 276 (324)
T ss_pred HHHHHHHHHHHHHhhcCeeeccccchHhhhhhhheeEeecceEEeeeecccc-hhhcCchHHHHHHHHhc
Confidence 345678999999999999999999999999998766522111000 01122 35679999999877654
No 66
>KOG2903 consensus Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=95.82 E-value=0.0037 Score=52.32 Aligned_cols=67 Identities=16% Similarity=0.083 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHhhCCCC--ccCCCCccHHhHHHHHHHHHHHHh---ccCchHHHHHHhhChHHHHHHHHHHhh
Q 037750 4 RASIAYRALSTRLGEES--FLFENRPSSVDAILLAHVLVTLHA---LPETSLLKSKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 4 ~a~~~L~aLe~~L~~~~--yl~Gd~pT~aDa~l~~~l~~ll~~---~~~~~~l~~~l~~~pnL~~y~eRv~~r 71 (160)
..-+.|+.+|..|+++. |++|+++|.+|+-+|.-+.-+--. -+. ..++.+..+||+|..|..++-.+
T Consensus 207 ~lfe~LDr~E~vL~~~~~~f~~G~~LTeaDirLy~TiIRFD~VY~~hFK-Cn~~~ir~~Yp~l~~~lk~iY~~ 278 (319)
T KOG2903|consen 207 QLFEALDRCEDVLGKNRKYFLCGDTLTEADIRLYTTIIRFDEVYVQHFK-CNKKTIRDEYPNLHNWLKNIYWN 278 (319)
T ss_pred HHHHHHHHHHHHHhcccceEeeccccchhheeeeeeEEeehhhhheeee-cchhhhhccCcHHHHHHHHHHhh
Confidence 34567888899999988 999999999999887654321110 000 12333334999999999887653
No 67
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=95.01 E-value=0.14 Score=37.79 Aligned_cols=39 Identities=21% Similarity=0.044 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHhhCC-CCccCCCCccHHhHHHHHHHHHHH
Q 037750 3 KRASIAYRALSTRLGE-ESFLFENRPSSVDAILLAHVLVTL 42 (160)
Q Consensus 3 ~~a~~~L~aLe~~L~~-~~yl~Gd~pT~aDa~l~~~l~~ll 42 (160)
..+.+.+...+.+|++ ++||||+ .|++|+.+.-++.-+.
T Consensus 46 ~~a~kL~~~a~~ll~~g~~~LFGe-wsIAD~dlA~ml~Rl~ 85 (117)
T PF14834_consen 46 AAAQKLIAVAERLLADGGPNLFGE-WSIADADLALMLNRLV 85 (117)
T ss_dssp HHHHHHHHHHHHHTTT--SSTTSS---HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCCcccc-chHHHHHHHHHHHHHH
Confidence 3567778888888864 6899995 9999996665555443
No 68
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=94.71 E-value=0.11 Score=39.17 Aligned_cols=61 Identities=11% Similarity=0.049 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhh
Q 037750 2 YKRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 2 ~~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r 71 (160)
..+++..|..|+.+|......-| ++|.=|+.+|++|..+...+. +.=-|++.+|+++|.++
T Consensus 61 i~~l~~~L~~Le~ll~~~~~~n~-~LS~dDi~lFp~LR~Ltivkg--------i~~P~~V~~Y~~~~s~~ 121 (132)
T PF04399_consen 61 IAELNADLEELEPLLASPNAVNG-ELSIDDIILFPILRSLTIVKG--------IQWPPKVRAYMDRMSKA 121 (132)
T ss_dssp HHHHHHHHHHHHHH-SCTTBTTS-S--HHHHHHHHHHHHHCTCTT--------S---HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccccccCC-CCCHHHHHHHHHHhhhhhccC--------CcCCHHHHHHHHHHHHH
Confidence 46788999999999986655555 899999999999886554432 22237899999999875
No 69
>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]
Probab=93.32 E-value=0.35 Score=41.17 Aligned_cols=55 Identities=13% Similarity=0.163 Sum_probs=42.3
Q ss_pred CCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhhcccCC
Q 037750 17 GEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTEFVEAG 76 (160)
Q Consensus 17 ~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r~~~~~ 76 (160)
.+++|+.|++|+++|..+||.+..+-.. ..+.+++ .+.++..|+-||.+..-...
T Consensus 306 knr~flGG~kPnLaDLsvfGvl~sm~gc----~afkd~~-q~t~I~eW~~rmealV~e~~ 360 (370)
T KOG3029|consen 306 KNRPFLGGKKPNLADLSVFGVLRSMEGC----QAFKDCL-QNTSIGEWYYRMEALVEENR 360 (370)
T ss_pred CCCCccCCCCCchhhhhhhhhhhHhhhh----hHHHHHH-hcchHHHHHHHHHHHHhccc
Confidence 4779999999999999999998866543 2344444 45689999999998665544
No 70
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=93.17 E-value=0.42 Score=35.86 Aligned_cols=61 Identities=13% Similarity=0.064 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhh
Q 037750 2 YKRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 2 ~~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r 71 (160)
..+++..|..|+.+|..... .+..+|.=|+.+|++|..+..... +.=-|++.+|+++|.+.
T Consensus 62 i~~l~~~L~~l~~ll~~~~~-~n~~ls~DDi~lFp~LR~Lt~vkg--------i~~P~~V~~Y~~~~s~~ 122 (128)
T cd03199 62 IAALNALLEELDPLILSSEA-VNGQLSTDDIILFPILRNLTLVKG--------LVFPPKVKAYLERMSAL 122 (128)
T ss_pred HHHHHHHHHHHHHHHcCccc-cCCcCCHHHHHHHHHHhhhhhhcC--------CCCCHHHHHHHHHHHHH
Confidence 46778889999988854433 455899999999988886554332 22237899999999874
No 71
>KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism]
Probab=92.70 E-value=0.2 Score=40.63 Aligned_cols=65 Identities=17% Similarity=0.117 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHhhCC---CCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHH-H-hhChHHHHHHHHHHhh
Q 037750 4 RASIAYRALSTRLGE---ESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSK-L-LEHGNLVRYAEKLKTE 71 (160)
Q Consensus 4 ~a~~~L~aLe~~L~~---~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~-l-~~~pnL~~y~eRv~~r 71 (160)
.+-..|..|+++|.. ++||-||+.|.+||.+..=|..+--+.- ..+++ + .+.+++.+|++.+-++
T Consensus 127 ~Ll~~L~~Ld~yL~sp~~~~Fl~Gd~lt~aDcsLlPKL~~i~va~k---~yk~~~IP~~lt~V~rYl~~~ya~ 196 (221)
T KOG1422|consen 127 ALLKELEKLDDYLKSPSRRKFLDGDKLTLADCSLLPKLHHIKVAAK---HYKNFEIPASLTGVWRYLKNAYAR 196 (221)
T ss_pred HHHHHHHHHHHHhcCccCCccccCCeeeeehhhhchhHHHHHHHHH---HhcCCCCchhhhHHHHHHHHHHhH
Confidence 345567899999974 7899999999999988876664332210 11111 1 2667888888877553
No 72
>KOG0868 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=88.17 E-value=0.51 Score=37.76 Aligned_cols=60 Identities=17% Similarity=0.189 Sum_probs=45.5
Q ss_pred HHHHHHHHHHhhC--CCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhh
Q 037750 5 ASIAYRALSTRLG--EESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 5 a~~~L~aLe~~L~--~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r 71 (160)
..+-+.+||..|. ...|-.||+.|.+|+.+...+... . ..+..|..||.+.+.-+++.+.
T Consensus 137 ItkGF~ALEklL~~~aGkycvGDevtiADl~L~pqv~nA-~------rf~vdl~PYPti~ri~e~l~el 198 (217)
T KOG0868|consen 137 ITKGFTALEKLLKSHAGKYCVGDEVTIADLCLPPQVYNA-N------RFHVDLTPYPTITRINEELAEL 198 (217)
T ss_pred HHHhHHHHHHHHHHccCCcccCceeehhhhccchhhhhh-h------hccccCCcCchHHHHHHHHHhC
Confidence 4567889999986 457999999999999877776632 1 2334577999999888887653
No 73
>PF02468 PsbN: Photosystem II reaction centre N protein (psbN); InterPro: IPR003398 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbN found in PSII. PsbN may have a role in PSII stability, however its actual function unknown. PsbN does not appear to be essential for photoautotrophic growth or normal PSII function.; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane
Probab=69.61 E-value=8.6 Score=23.51 Aligned_cols=28 Identities=21% Similarity=0.242 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHHHhccccCCCCccCC
Q 037750 125 YFLATQLVAIVLFLSVMNIYDISEPELDN 153 (160)
Q Consensus 125 ~~~~~a~~a~~~y~~~~g~~~~~~~~~~~ 153 (160)
.++++-++++.+|.+..+.| ..+.||.|
T Consensus 9 i~i~~~lv~~Tgy~iYtaFG-ppSk~LrD 36 (43)
T PF02468_consen 9 IFISCLLVSITGYAIYTAFG-PPSKELRD 36 (43)
T ss_pred HHHHHHHHHHHhhhhhheeC-CCccccCC
Confidence 56778899999999999986 56666665
No 74
>PHA00726 hypothetical protein
Probab=66.72 E-value=1.9 Score=30.13 Aligned_cols=30 Identities=27% Similarity=0.535 Sum_probs=18.4
Q ss_pred CCCCCcCCCHHHHHHhhhhHHHHHHHHHHHHH
Q 037750 105 KPKPKREKTEEEKTFRRRAKYFLATQLVAIVL 136 (160)
Q Consensus 105 ~~~~~~~~~~ed~~~~rr~~~~~~~a~~a~~~ 136 (160)
|||++++++-.+.++- .+|.|+++++|++.
T Consensus 28 KpK~k~~~~~~~~r~i--GyYlVissv~aL~v 57 (89)
T PHA00726 28 KPKPKKVKSTLNHRSI--GYYLVISSVLALIV 57 (89)
T ss_pred CCCCchhhcCCCCcce--eeeeHHHHHHHHHH
Confidence 4455555544444332 67889888888764
No 75
>PRK13183 psbN photosystem II reaction center protein N; Provisional
Probab=61.40 E-value=7.7 Score=24.04 Aligned_cols=28 Identities=21% Similarity=0.141 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHHHhccccCCCCccCC
Q 037750 125 YFLATQLVAIVLFLSVMNIYDISEPELDN 153 (160)
Q Consensus 125 ~~~~~a~~a~~~y~~~~g~~~~~~~~~~~ 153 (160)
.++++-++++.+|.+..+.| ..+-||.|
T Consensus 12 i~i~~lL~~~TgyaiYtaFG-ppSk~LrD 39 (46)
T PRK13183 12 ITILAILLALTGFGIYTAFG-PPSKELDD 39 (46)
T ss_pred HHHHHHHHHHhhheeeeccC-CcccccCC
Confidence 57788899999999999986 55777776
No 76
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=59.15 E-value=11 Score=35.08 Aligned_cols=37 Identities=22% Similarity=0.151 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHH
Q 037750 4 RASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLV 40 (160)
Q Consensus 4 ~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ 40 (160)
.....+..|+..|.-..||.|.+.|++|..+|+.+..
T Consensus 92 ~~s~~~~~ld~~l~~~t~lvg~sls~Ad~aiw~~l~~ 128 (712)
T KOG1147|consen 92 EISSSLSELDKFLVLRTFLVGNSLSIADFAIWGALHS 128 (712)
T ss_pred HHHHHHHHHHhhhhHHHHhhccchhHHHHHHHHHHhc
Confidence 4556677777778778999999999999999988874
No 77
>CHL00020 psbN photosystem II protein N
Probab=57.85 E-value=7.7 Score=23.72 Aligned_cols=28 Identities=14% Similarity=0.182 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHHHhccccCCCCccCC
Q 037750 125 YFLATQLVAIVLFLSVMNIYDISEPELDN 153 (160)
Q Consensus 125 ~~~~~a~~a~~~y~~~~g~~~~~~~~~~~ 153 (160)
.++++-++++.+|.+..+.| ..+-+|.|
T Consensus 9 i~i~~ll~~~Tgy~iYtaFG-ppSk~LrD 36 (43)
T CHL00020 9 IFISGLLVSFTGYALYTAFG-QPSKQLRD 36 (43)
T ss_pred HHHHHHHHHhhheeeeeccC-CchhccCC
Confidence 57778899999999999986 55677766
No 78
>PF09125 COX2-transmemb: Cytochrome C oxidase subunit II, transmembrane; InterPro: IPR015209 This N-terminal domain forms the transmembrane region in subunit II of cytochrome c oxidase from Thermus thermophilus. This domain adopts a tertiary structure consisting of two antiparallel transmembrane helices, in a transmembrane helix hairpin fold []. ; PDB: 1EHK_B 2QPE_B 3S8F_B 4EV3_B 3BVD_B 3S8G_B 3EH3_B 3S3C_B 3S39_B 3QJQ_B ....
Probab=57.52 E-value=33 Score=20.28 Aligned_cols=25 Identities=16% Similarity=0.401 Sum_probs=17.3
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHhcc
Q 037750 119 FRRRAKYFLATQLVAIVLFLSVMNI 143 (160)
Q Consensus 119 ~~rr~~~~~~~a~~a~~~y~~~~g~ 143 (160)
..|=-|-|++.+++-+++|+.+.|.
T Consensus 9 i~aYEr~Wi~F~l~mi~vFi~li~y 33 (38)
T PF09125_consen 9 IEAYERGWIAFALAMILVFIALIGY 33 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 3444566777788888888877663
No 79
>TIGR00847 ccoS cytochrome oxidase maturation protein, cbb3-type. CcoS from Rhodobacter capsulatus has been shown essential for incorporation of redox-active prosthetic groups (heme, Cu) into cytochrome cbb(3) oxidase. FixS of Bradyrhizobium japonicum appears to have the same function. Members of this family are found so far in organisms with a cbb3-type cytochrome oxidase, including Neisseria meningitidis, Helicobacter pylori, Campylobacter jejuni, Caulobacter crescentus, Bradyrhizobium japonicum, and Rhodobacter capsulatus.
Probab=51.31 E-value=22 Score=22.43 Aligned_cols=23 Identities=30% Similarity=0.226 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHH--HHhccccCCCC
Q 037750 127 LATQLVAIVLFL--SVMNIYDISEP 149 (160)
Q Consensus 127 ~~~a~~a~~~y~--~~~g~~~~~~~ 149 (160)
++.+++++++|+ +=+||++.-+.
T Consensus 12 l~l~~~~l~~f~Wavk~GQfDDle~ 36 (51)
T TIGR00847 12 LLLGGVGLVAFLWSLKSGQYDDLKG 36 (51)
T ss_pred HHHHHHHHHHHHHHHccCCCCCCcc
Confidence 344555555554 55888544443
No 80
>TIGR03726 strep_RK_lipo putative cross-wall-targeting lipoprotein signal. The YSIRK signal domain targets proteins to the cross-wall, or septum, of dividing Gram-positive bacterial. Lipoprotein signal motifs direct a characteristic N-terminal cleavage and lipid modification for membrane anchoring. This Streptococcal-only signal peptide variant appears to be a hybrid between the two, likely directing protein targeting of nascent surface lipoproteins to the cross-wall. Nearly all members of this family have the characteristic LPXTG cell wall anchor signal at the C-terminus.
Probab=47.90 E-value=36 Score=19.72 Aligned_cols=25 Identities=24% Similarity=0.267 Sum_probs=18.5
Q ss_pred HhhhhH-HHHHHHHHHHHHHHHHhcc
Q 037750 119 FRRRAK-YFLATQLVAIVLFLSVMNI 143 (160)
Q Consensus 119 ~~rr~~-~~~~~a~~a~~~y~~~~g~ 143 (160)
|||.++ --+|+++.+.++-++++|+
T Consensus 3 FRKsK~~~tLCGa~Lgt~~~~~~ag~ 28 (34)
T TIGR03726 3 FRKSKKYRTLCGAALGTAVTASVAGT 28 (34)
T ss_pred chhhHHHHHHHHHHHHHHHHHHhccc
Confidence 555455 6788888888777788887
No 81
>PF06679 DUF1180: Protein of unknown function (DUF1180); InterPro: IPR009565 This entry consists of several hypothetical eukaryotic proteins thought to be membrane proteins. Their function is unknown.
Probab=46.78 E-value=21 Score=27.85 Aligned_cols=25 Identities=20% Similarity=0.422 Sum_probs=16.6
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHH
Q 037750 116 EKTFRRRAKYFLATQLVAIVLFLSV 140 (160)
Q Consensus 116 d~~~~rr~~~~~~~a~~a~~~y~~~ 140 (160)
|+..-+|.-|.+++..+.+++|+++
T Consensus 90 d~~~l~R~~~Vl~g~s~l~i~yfvi 114 (163)
T PF06679_consen 90 DSPMLKRALYVLVGLSALAILYFVI 114 (163)
T ss_pred CccchhhhHHHHHHHHHHHHHHHHH
Confidence 3444456668888777777777754
No 82
>PF13781 DoxX_3: DoxX-like family
Probab=43.60 E-value=34 Score=24.27 Aligned_cols=25 Identities=24% Similarity=0.449 Sum_probs=18.8
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHhcc
Q 037750 119 FRRRAKYFLATQLVAIVLFLSVMNI 143 (160)
Q Consensus 119 ~~rr~~~~~~~a~~a~~~y~~~~g~ 143 (160)
+|||+|.....|++.+++|.+....
T Consensus 54 ~~~~~r~~~~l~i~~~l~y~~~~~~ 78 (102)
T PF13781_consen 54 SRRRRRWLLLLQIALLLGYTLAIAI 78 (102)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566677777799999999977654
No 83
>PF06072 Herpes_US9: Alphaherpesvirus tegument protein US9; InterPro: IPR009278 This family consists of several US9 and related proteins from the Alphaherpesviruses. The function of the US9 protein is unknown although in Bovine herpesvirus 5 Us9 is essential for the anterograde spread of the virus from the olfactory mucosa to the bulb [].; GO: 0019033 viral tegument
Probab=41.01 E-value=47 Score=21.71 Aligned_cols=19 Identities=11% Similarity=0.058 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHHHHHhcc
Q 037750 125 YFLATQLVAIVLFLSVMNI 143 (160)
Q Consensus 125 ~~~~~a~~a~~~y~~~~g~ 143 (160)
++.++.++++++-.++||+
T Consensus 33 ~~~v~~v~~~~~~c~~S~~ 51 (60)
T PF06072_consen 33 RLAVAIVFAVVALCVLSGG 51 (60)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4444444444455566654
No 84
>KOG1668 consensus Elongation factor 1 beta/delta chain [Transcription]
Probab=39.30 E-value=28 Score=28.70 Aligned_cols=34 Identities=21% Similarity=0.303 Sum_probs=29.3
Q ss_pred HHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHH
Q 037750 6 SIAYRALSTRLGEESFLFENRPSSVDAILLAHVL 39 (160)
Q Consensus 6 ~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~ 39 (160)
.+.+..|+..|.++.|.-|..++-.|+.+|+-+.
T Consensus 10 ~~glk~l~~sLA~ks~~~g~~~s~edv~vf~al~ 43 (231)
T KOG1668|consen 10 PAGLKKLNKSLAEKSYIEGYQLSKEDVVVFAALG 43 (231)
T ss_pred hhhhhhhhHhhhcccCCCCCCcccccceeehhcc
Confidence 3567889999999999999999999998886663
No 85
>PF11166 DUF2951: Protein of unknown function (DUF2951); InterPro: IPR021337 This family of proteins has no known function. It has a highly conserved sequence.
Probab=38.97 E-value=41 Score=24.02 Aligned_cols=21 Identities=19% Similarity=0.129 Sum_probs=15.1
Q ss_pred hhhhHHHHHHHHHHHHHHHHH
Q 037750 120 RRRAKYFLATQLVAIVLFLSV 140 (160)
Q Consensus 120 ~rr~~~~~~~a~~a~~~y~~~ 140 (160)
-|-.|+|+.|.++.+++-+++
T Consensus 69 ir~~KmwilGlvgTi~gslii 89 (98)
T PF11166_consen 69 IRDIKMWILGLVGTIFGSLII 89 (98)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 346789999888777766543
No 86
>PTZ00128 cytochrome c oxidase assembly protein-like; Provisional
Probab=38.83 E-value=1.1e+02 Score=25.24 Aligned_cols=16 Identities=13% Similarity=0.141 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHHHHH
Q 037750 125 YFLATQLVAIVLFLSV 140 (160)
Q Consensus 125 ~~~~~a~~a~~~y~~~ 140 (160)
+.+++.+++|+++.++
T Consensus 58 ~~l~~~~v~Mfgf~fA 73 (232)
T PTZ00128 58 YYNLSLYIAMFGCSFA 73 (232)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5555566777776643
No 87
>KOG3970 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=38.11 E-value=53 Score=27.33 Aligned_cols=24 Identities=17% Similarity=0.437 Sum_probs=17.9
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhcc
Q 037750 120 RRRAKYFLATQLVAIVLFLSVMNI 143 (160)
Q Consensus 120 ~rr~~~~~~~a~~a~~~y~~~~g~ 143 (160)
.+|++..|..|+.|+|+++.+|-.
T Consensus 250 ~~ra~fli~lgvLafi~~i~lM~r 273 (299)
T KOG3970|consen 250 KKRALFLIFLGVLAFITIIMLMKR 273 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566777799999998888754
No 88
>PRK09400 secE preprotein translocase subunit SecE; Reviewed
Probab=36.67 E-value=44 Score=21.74 Aligned_cols=23 Identities=26% Similarity=0.286 Sum_probs=14.7
Q ss_pred HHHhhhhH-HHHHHHHHHHHHHHH
Q 037750 117 KTFRRRAK-YFLATQLVAIVLFLS 139 (160)
Q Consensus 117 ~~~~rr~~-~~~~~a~~a~~~y~~ 139 (160)
+.|.+-.+ ..++..++++++|++
T Consensus 30 ~Ef~~ia~~~~iG~~i~G~iGf~I 53 (61)
T PRK09400 30 EEFLLVAKVTGLGILLIGLIGFII 53 (61)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34776767 444557777777764
No 89
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=36.38 E-value=70 Score=25.76 Aligned_cols=61 Identities=15% Similarity=0.118 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHhhCCCCccCCCCccHHhHHHHHHHHHHHHhccCchHHHHHHhhChHHHHHHHHHHhh
Q 037750 2 YKRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTE 71 (160)
Q Consensus 2 ~~~a~~~L~aLe~~L~~~~yl~Gd~pT~aDa~l~~~l~~ll~~~~~~~~l~~~l~~~pnL~~y~eRv~~r 71 (160)
..+...+|++|+.++-...=+-| ..+.=|+.+|..|..+...+. +.=-..+.+|..+|.+.
T Consensus 144 ~~~i~~dl~~l~~Li~~~s~~n~-~l~~ddi~vFplLRnlt~v~g--------i~wps~v~dy~~~msek 204 (215)
T COG2999 144 LKRIQADLRALDKLIVGPSAVNG-ELSEDDILVFPLLRNLTLVAG--------IQWPSRVADYRDNMSEK 204 (215)
T ss_pred HHHHHHHHHHHHHHhcCcchhcc-ccchhhhhhhHHhccceeccc--------CCCcHHHHHHHHHHHHh
Confidence 46788899999998865542333 588899988877664433321 22235688999998763
No 90
>PF08628 Nexin_C: Sorting nexin C terminal; InterPro: IPR013937 This region is found at the C terminus of proteins belonging to the nexin family. It is found on proteins which also contain IPR001683 from INTERPRO.
Probab=36.30 E-value=1.5e+02 Score=20.81 Aligned_cols=22 Identities=18% Similarity=0.373 Sum_probs=18.9
Q ss_pred hhChHHHHHHHHHHhhcccCCC
Q 037750 56 LEHGNLVRYAEKLKTEFVEAGS 77 (160)
Q Consensus 56 ~~~pnL~~y~eRv~~r~~~~~~ 77 (160)
..-+++..|+..+++-+||++.
T Consensus 35 ~se~~v~~~i~~l~~~lwP~g~ 56 (113)
T PF08628_consen 35 TSEEQVARYIQLLRESLWPNGK 56 (113)
T ss_pred cCHHHHHHHHHHHHHhhCCCCC
Confidence 3458999999999999999884
No 91
>PRK14759 potassium-transporting ATPase subunit F; Provisional
Probab=35.77 E-value=54 Score=18.33 Aligned_cols=17 Identities=24% Similarity=0.596 Sum_probs=10.4
Q ss_pred HHHHHHH-HHHHHHHHHh
Q 037750 125 YFLATQL-VAIVLFLSVM 141 (160)
Q Consensus 125 ~~~~~a~-~a~~~y~~~~ 141 (160)
|++++++ +++++|+++.
T Consensus 5 ~~l~~~va~~L~vYL~~A 22 (29)
T PRK14759 5 YSLAGAVSLGLLIYLTYA 22 (29)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 5666544 3477888754
No 92
>PF12911 OppC_N: N-terminal TM domain of oligopeptide transport permease C
Probab=34.41 E-value=60 Score=19.81 Aligned_cols=26 Identities=19% Similarity=0.478 Sum_probs=13.6
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHhc
Q 037750 117 KTFRRRAKYFLATQLVAIVLFLSVMN 142 (160)
Q Consensus 117 ~~~~rr~~~~~~~a~~a~~~y~~~~g 142 (160)
++|+|.+...++..++.++.-+.+-|
T Consensus 10 ~~f~~nk~a~~gl~il~~~vl~ai~~ 35 (56)
T PF12911_consen 10 RRFRRNKLAVIGLIILLILVLLAIFA 35 (56)
T ss_pred HHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 34665555666655555444444433
No 93
>PF04835 Pox_A9: A9 protein conserved region; InterPro: IPR006920 This entry represents a family of Chordopoxvirus A9 proteins. Chordopoxvirus belongs to the family Poxviridae and is the cause of vertebrate infections [].
Probab=33.79 E-value=52 Score=21.02 Aligned_cols=19 Identities=5% Similarity=0.420 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHHHhcc
Q 037750 125 YFLATQLVAIVLFLSVMNI 143 (160)
Q Consensus 125 ~~~~~a~~a~~~y~~~~g~ 143 (160)
+.++=.+++|+.|+++.=+
T Consensus 24 fViik~vismimylilGi~ 42 (54)
T PF04835_consen 24 FVIIKSVISMIMYLILGIA 42 (54)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4445589999999987543
No 94
>PF13260 DUF4051: Protein of unknown function (DUF4051)
Probab=33.06 E-value=66 Score=20.22 Aligned_cols=18 Identities=17% Similarity=0.390 Sum_probs=13.5
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 037750 123 AKYFLATQLVAIVLFLSV 140 (160)
Q Consensus 123 ~~~~~~~a~~a~~~y~~~ 140 (160)
+|||++.-+.-+++|..-
T Consensus 4 awywivli~lv~~gy~~h 21 (54)
T PF13260_consen 4 AWYWIVLIVLVVVGYFCH 21 (54)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 689988877777777643
No 95
>PF04415 DUF515: Protein of unknown function (DUF515) ; InterPro: IPR007509 This is a family of hypothetical archaeal proteins.
Probab=33.00 E-value=39 Score=30.21 Aligned_cols=17 Identities=18% Similarity=0.565 Sum_probs=7.3
Q ss_pred hhhhHHHHHHHHHHHHH
Q 037750 120 RRRAKYFLATQLVAIVL 136 (160)
Q Consensus 120 ~rr~~~~~~~a~~a~~~ 136 (160)
+||+|..+++++++++.
T Consensus 27 e~~~riiiGa~Vl~iIi 43 (416)
T PF04415_consen 27 ERRKRIIIGAAVLIIII 43 (416)
T ss_pred hhhhhhhhhhhhHhHHH
Confidence 33444444444444443
No 96
>PLN00077 photosystem II reaction centre W protein; Provisional
Probab=30.93 E-value=73 Score=23.74 Aligned_cols=19 Identities=5% Similarity=0.058 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHHHHhcc
Q 037750 125 YFLATQLVAIVLFLSVMNI 143 (160)
Q Consensus 125 ~~~~~a~~a~~~y~~~~g~ 143 (160)
-||..+++++|-=+.....
T Consensus 96 gwIL~gVf~liw~ly~~~~ 114 (128)
T PLN00077 96 GWILLGVFGLIWSLYTTYT 114 (128)
T ss_pred hHHHHhHHHHHHHHHhhee
Confidence 5777788887755544444
No 97
>PF11298 DUF3099: Protein of unknown function (DUF3099); InterPro: IPR021449 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=30.66 E-value=1.4e+02 Score=20.16 Aligned_cols=18 Identities=22% Similarity=0.521 Sum_probs=10.0
Q ss_pred CCHHHHHHhhhhHHHHHH
Q 037750 112 KTEEEKTFRRRAKYFLAT 129 (160)
Q Consensus 112 ~~~ed~~~~rr~~~~~~~ 129 (160)
++.+|..-+|+++|++..
T Consensus 7 ~s~~~d~~~R~r~Y~i~M 24 (73)
T PF11298_consen 7 RSLSQDQRRRRRRYLIMM 24 (73)
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 344344346677787764
No 98
>PHA03049 IMV membrane protein; Provisional
Probab=30.41 E-value=60 Score=21.67 Aligned_cols=19 Identities=0% Similarity=0.179 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHhcc
Q 037750 125 YFLATQLVAIVLFLSVMNI 143 (160)
Q Consensus 125 ~~~~~a~~a~~~y~~~~g~ 143 (160)
..+|.+++++++|.+..-+
T Consensus 8 ~iICVaIi~lIvYgiYnkk 26 (68)
T PHA03049 8 VIICVVIIGLIVYGIYNKK 26 (68)
T ss_pred HHHHHHHHHHHHHHHHhcc
Confidence 5678899999999998866
No 99
>PF03597 CcoS: Cytochrome oxidase maturation protein cbb3-type; InterPro: IPR004714 Cytochrome cbb3 oxidases are found almost exclusively in Proteobacteria, and represent a distinctive class of proton-pumping respiratory haem-copper oxidases (HCO) that lack many of the key structural features that contribute to the reaction cycle of the intensely studied mitochondrial cytochrome c oxidase (CcO). Expression of cytochrome cbb3 oxidase allows human pathogens to colonise anoxic tissues and agronomically important diazotrophs to sustain nitrogen fixation []. Genes encoding a cytochrome cbb3 oxidase were initially designated fixNOQP (ccoNOQP), the ccoNOQP operon is always found close to a second gene cluster, known as fixGHIS (ccoGHIS) whose expression is necessary for the assembly of a functional cbb3 oxidase. On the basis of their derived amino acid sequences each of the four proteins encoded by the ccoGHIS operon are thought to be membrane-bound. It has been suggested that they may function in concert as a multi-subunit complex, possibly playing a role in the uptake and metabolism of copper required for the assembly of the binuclear centre of cytochrome cbb3 oxidase.
Probab=29.78 E-value=87 Score=19.10 Aligned_cols=18 Identities=28% Similarity=0.433 Sum_probs=9.9
Q ss_pred HHHHHHHHHHH--HHhcccc
Q 037750 128 ATQLVAIVLFL--SVMNIYD 145 (160)
Q Consensus 128 ~~a~~a~~~y~--~~~g~~~ 145 (160)
+.+++++++|+ +=+||++
T Consensus 12 ~l~~~~l~~f~Wavk~GQfd 31 (45)
T PF03597_consen 12 ILGLIALAAFLWAVKSGQFD 31 (45)
T ss_pred HHHHHHHHHHHHHHccCCCC
Confidence 33444444444 7788853
No 100
>PF06796 NapE: Periplasmic nitrate reductase protein NapE; InterPro: IPR010649 This family consists of several bacterial periplasmic nitrate reductase NapE proteins. Seven genes, napKEFDABC, encoding the periplasmic nitrate reductase system were cloned from the denitrifying phototrophic bacterium Rhodobacter sphaeroides. NapE is thought to be a transmembrane protein [].
Probab=28.49 E-value=1.3e+02 Score=19.34 Aligned_cols=28 Identities=29% Similarity=0.221 Sum_probs=11.4
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHh
Q 037750 114 EEEKTFRRRAKYFLATQLVAIVLFLSVM 141 (160)
Q Consensus 114 ~ed~~~~rr~~~~~~~a~~a~~~y~~~~ 141 (160)
++.|+-+++.=.|++.-+.=+++-++++
T Consensus 11 ~~~k~~E~~~flfl~~~l~PiL~v~~Vg 38 (56)
T PF06796_consen 11 KSTKRSELKAFLFLAVVLFPILAVAFVG 38 (56)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334344444455544333333333333
No 101
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=28.02 E-value=71 Score=21.37 Aligned_cols=19 Identities=5% Similarity=0.238 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHHHHhcc
Q 037750 125 YFLATQLVAIVLFLSVMNI 143 (160)
Q Consensus 125 ~~~~~a~~a~~~y~~~~g~ 143 (160)
..+|.++++++.|.+..-+
T Consensus 8 i~ICVaii~lIlY~iYnr~ 26 (68)
T PF05961_consen 8 IIICVAIIGLILYGIYNRK 26 (68)
T ss_pred HHHHHHHHHHHHHHHHhcc
Confidence 4578899999999998766
No 102
>PF14967 FAM70: FAM70 protein
Probab=27.36 E-value=35 Score=29.30 Aligned_cols=25 Identities=24% Similarity=0.587 Sum_probs=19.6
Q ss_pred HhhhhH--HHHHHHHHHHHHHHHHhcc
Q 037750 119 FRRRAK--YFLATQLVAIVLFLSVMNI 143 (160)
Q Consensus 119 ~~rr~~--~~~~~a~~a~~~y~~~~g~ 143 (160)
|+||+| .|+.+.+..|-+.++..|.
T Consensus 20 f~rRkk~slw~~~~lL~vS~~iltvGL 46 (327)
T PF14967_consen 20 FARRKKTSLWFVVSLLVVSLLILTVGL 46 (327)
T ss_pred HhhhhceeeeeeHHHHHHHHHHHHhhh
Confidence 555555 8988888888888888776
No 103
>PF04647 AgrB: Accessory gene regulator B; InterPro: IPR006741 The accessory gene regulator (agr) of Staphylococcus aureus is the central regulatory system that controls the gene expression for a large set of virulence factors. The arg locus consists of two transcripts: RNAII and RNAIII. RNAII encodes four genes (agrA, B, C, and D) whose gene products assemble a quorum sensing system. At low cell density, the agr genes are continuously expressed at basal levels. A signal molecule, autoinducing peptide (AIP), produced and secreted by the bacteria, accumulates outside of the cells. When the cell density increases and the AIP concentration reaches a threshold, it activates the agr response, i.e. activation of secreted protein gene expression and subsequent repression of cell wall-associated protein genes. AgrB and AgrD are essential for the production of the autoinducing peptide which functions as a signal for quorum sensing. AgrB is a transmembrane protein [] involved in the proteolytic processing of AgrD, and may have both proteolytic and transporter activities, facilitating the export of the processed AgrD peptide []. ; GO: 0016020 membrane
Probab=26.76 E-value=1.5e+02 Score=22.47 Aligned_cols=14 Identities=0% Similarity=0.192 Sum_probs=6.3
Q ss_pred ccHHhHHHHHHHHH
Q 037750 27 PSSVDAILLAHVLV 40 (160)
Q Consensus 27 pT~aDa~l~~~l~~ 40 (160)
-|..=|.+++.+..
T Consensus 74 ~t~~~C~i~s~~~~ 87 (185)
T PF04647_consen 74 KTFFRCFIFSVLIF 87 (185)
T ss_pred CCChHHHHHHHHHH
Confidence 33444555444443
No 104
>TIGR00327 secE_euk_arch protein translocase SEC61 complex gamma subunit, archaeal and eukaryotic. This model describes archaeal SEC61-like and eukaryotic SEC61 but not bacterial secE proteins, for which a Pfam pfam00584 (SecE) has been created.
Probab=26.76 E-value=80 Score=20.59 Aligned_cols=23 Identities=17% Similarity=0.284 Sum_probs=14.1
Q ss_pred HHHhhhhH-HHHHHHHHHHHHHHH
Q 037750 117 KTFRRRAK-YFLATQLVAIVLFLS 139 (160)
Q Consensus 117 ~~~~rr~~-~~~~~a~~a~~~y~~ 139 (160)
+.|.+-.+ ..++.+++++++|++
T Consensus 26 ~Ef~~iak~t~iG~~i~G~IGf~I 49 (61)
T TIGR00327 26 EEYLKVAKVTGIGIIIVGIIGYII 49 (61)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34666666 444447777777764
No 105
>PF10731 Anophelin: Thrombin inhibitor from mosquito; InterPro: IPR018932 Members of this family are all inhibitors of thrombin, the peptidase that is at the end of the blood coagulation cascade and which creates the clot by cleaving fibrinogen. The interaction between thrombin and fibrinogen involves two different areas of contact - via the thrombin active site and via a second substrate-binding site known as an exosite. The inhibitor acts by blocking the exosite, rather than by interacting with the active site. The inhibitors are from mosquitoes that feed on human blood and which, by inhibiting thrombin, prevent the blood from clotting and keep it flowing.
Probab=25.98 E-value=74 Score=20.89 Aligned_cols=8 Identities=50% Similarity=0.671 Sum_probs=3.3
Q ss_pred HHHHHHHH
Q 037750 126 FLATQLVA 133 (160)
Q Consensus 126 ~~~~a~~a 133 (160)
++|.|++|
T Consensus 10 lLC~aLva 17 (65)
T PF10731_consen 10 LLCVALVA 17 (65)
T ss_pred HHHHHHHH
Confidence 33434444
No 106
>PF11174 DUF2970: Protein of unknown function (DUF2970); InterPro: IPR021344 This short family is conserved in Proteobacteria. The function is not known.
Probab=25.66 E-value=1e+02 Score=19.71 Aligned_cols=25 Identities=20% Similarity=0.479 Sum_probs=15.8
Q ss_pred HHHHHhhh-hHHHHHHHHHHHHHHHH
Q 037750 115 EEKTFRRR-AKYFLATQLVAIVLFLS 139 (160)
Q Consensus 115 ed~~~~rr-~~~~~~~a~~a~~~y~~ 139 (160)
-|+.|++. ..-++++|++..+.|+.
T Consensus 21 ~e~Df~~~~p~~~Ii~gii~~~~fV~ 46 (56)
T PF11174_consen 21 RERDFAQGSPVHFIIVGIILAALFVA 46 (56)
T ss_pred HHHHHHcCCCchHHHHHHHHHHHHHH
Confidence 34445544 34777778888777763
No 107
>PLN00082 photosystem II reaction centre W protein (PsbW); Provisional
Probab=25.11 E-value=1.2e+02 Score=20.09 Aligned_cols=16 Identities=13% Similarity=0.243 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHHHHHH
Q 037750 125 YFLATQLVAIVLFLSV 140 (160)
Q Consensus 125 ~~~~~a~~a~~~y~~~ 140 (160)
-||..+++++|-=+..
T Consensus 35 gwIL~gvf~liw~ly~ 50 (67)
T PLN00082 35 TWILVGVTALIWALYF 50 (67)
T ss_pred hhHHHHHHHHHHHHHh
Confidence 5777777777643333
No 108
>PF11297 DUF3098: Protein of unknown function (DUF3098); InterPro: IPR021448 This bacterial family of proteins has no known function.
Probab=24.27 E-value=1.2e+02 Score=20.25 Aligned_cols=20 Identities=15% Similarity=-0.004 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHHHHhccc
Q 037750 125 YFLATQLVAIVLFLSVMNIY 144 (160)
Q Consensus 125 ~~~~~a~~a~~~y~~~~g~~ 144 (160)
+.+++.++-+++|++.+|.+
T Consensus 10 ll~iG~~vIilGfilMsg~~ 29 (69)
T PF11297_consen 10 LLAIGIAVIILGFILMSGGG 29 (69)
T ss_pred HHHHHHHHHHHHHHheeCCC
Confidence 44555667778899888864
No 109
>PF04404 ERF: ERF superfamily; InterPro: IPR007499 The DNA single-strand annealing proteins (SSAPs), such as RecT, Red-beta, ERF and Rad52, function in RecA-dependent and RecA-independent DNA recombination pathways. This family includes proteins related to ERF [].
Probab=23.85 E-value=82 Score=23.58 Aligned_cols=21 Identities=5% Similarity=0.221 Sum_probs=10.0
Q ss_pred HHHHHHHHH---HHhccccCCCCc
Q 037750 130 QLVAIVLFL---SVMNIYDISEPE 150 (160)
Q Consensus 130 a~~a~~~y~---~~~g~~~~~~~~ 150 (160)
++++.+.|+ +|++..++.++|
T Consensus 100 ~~Gsa~TYArRY~l~~~f~I~~~d 123 (160)
T PF04404_consen 100 ATGSAITYARRYALSAAFGIATDD 123 (160)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCC
Confidence 334444444 444444455554
No 110
>cd05170 PIKKc_SMG1 Suppressor of morphogenetic effect on genitalia-1 (SMG-1), catalytic domain; The SMG-1 catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. SMG-1 is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). In addition to its catalytic domain, SMG-1 contains a FATC (FRAP, ATM and TRRAP, C-terminal) domain at the C-terminus. SMG-1 plays a critical role in the mRNA surveillance mechanism known as non-sense mediated mRNA decay (NMD). NMD protects the cells from the accumulation of aberrant mRNAs with premature termination codons (PTCs) generated by geno
Probab=23.23 E-value=1.1e+02 Score=25.91 Aligned_cols=27 Identities=7% Similarity=0.236 Sum_probs=20.9
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHhc
Q 037750 116 EKTFRRRAKYFLATQLVAIVLFLSVMN 142 (160)
Q Consensus 116 d~~~~rr~~~~~~~a~~a~~~y~~~~g 142 (160)
+.-+.+|..+-...|+.+|++|++-.|
T Consensus 188 ~~w~~~r~~f~~s~A~~s~~~yilglg 214 (307)
T cd05170 188 SEWWSVTQRYARSTAVMSMIGYVIGLG 214 (307)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 344676777888889999999998444
No 111
>PRK13855 type IV secretion system protein VirB10; Provisional
Probab=22.74 E-value=97 Score=27.39 Aligned_cols=22 Identities=23% Similarity=0.169 Sum_probs=19.7
Q ss_pred hHHHHHHHHHHHHHHHHHhccc
Q 037750 123 AKYFLATQLVAIVLFLSVMNIY 144 (160)
Q Consensus 123 ~~~~~~~a~~a~~~y~~~~g~~ 144 (160)
+|.+|+++++++++|++-++.+
T Consensus 31 ~~~~v~~~~~~~~~~~~w~~~~ 52 (376)
T PRK13855 31 QKLIVAGLVLALSLSLIWLGGR 52 (376)
T ss_pred hhhhHHHHHHHHHHHHHHhccC
Confidence 5789999999999999998874
No 112
>PF09889 DUF2116: Uncharacterized protein containing a Zn-ribbon (DUF2116); InterPro: IPR019216 This entry contains various hypothetical prokaryotic proteins whose functions are unknown. They contain a conserved zinc ribbon motif in the N-terminal part and a predicted transmembrane segment in the C-terminal part.
Probab=22.60 E-value=2.2e+02 Score=18.40 Aligned_cols=17 Identities=6% Similarity=0.409 Sum_probs=7.9
Q ss_pred HHHHHHHHHH-HHHHHHH
Q 037750 124 KYFLATQLVA-IVLFLSV 140 (160)
Q Consensus 124 ~~~~~~a~~a-~~~y~~~ 140 (160)
++.+.+.+++ +++|+++
T Consensus 39 ~~i~~~~~i~~l~v~~~~ 56 (59)
T PF09889_consen 39 QYIFFGIFILFLAVWIFM 56 (59)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 4555555555 3444443
No 113
>PF07330 DUF1467: Protein of unknown function (DUF1467); InterPro: IPR009935 This family consists of several bacterial proteins of around 90 residues in length. The function of this family is unknown.
Probab=20.52 E-value=84 Score=21.83 Aligned_cols=21 Identities=19% Similarity=0.306 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHHHHhcccc
Q 037750 125 YFLATQLVAIVLFLSVMNIYD 145 (160)
Q Consensus 125 ~~~~~a~~a~~~y~~~~g~~~ 145 (160)
-++++-+.++++++..+|.++
T Consensus 57 Tiiaavi~~~~~~~~~~g~i~ 77 (85)
T PF07330_consen 57 TIIAAVIFAIIYLIIVSGWIS 77 (85)
T ss_pred HHHHHHHHHHHHHHHHhcccc
Confidence 344445566666667788753
No 114
>PF12650 DUF3784: Domain of unknown function (DUF3784); InterPro: IPR017259 This group represents an uncharacterised conserved protein.
Probab=20.32 E-value=95 Score=21.32 Aligned_cols=33 Identities=24% Similarity=0.329 Sum_probs=19.7
Q ss_pred CCCcCCCHHHHHHhhhhHHHHHHHHHHHHHHHH
Q 037750 107 KPKREKTEEEKTFRRRAKYFLATQLVAIVLFLS 139 (160)
Q Consensus 107 ~~~~~~~~ed~~~~rr~~~~~~~a~~a~~~y~~ 139 (160)
+++|++-++++--|--.+.+++.+++-++.+++
T Consensus 31 ~eEk~~~D~~~l~r~~g~~~~~~~i~~li~~l~ 63 (97)
T PF12650_consen 31 KEEKEKYDKKKLCRFMGKFMLIIGIILLIGGLL 63 (97)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555666665555566666666666666653
No 115
>TIGR01006 polys_exp_MPA1 polysaccharide export protein, MPA1 family, Gram-positive type. This family contains members from Low GC Gram-positive bacteria; they are proposed to have a function in the export of complex polysaccharides.
Probab=20.23 E-value=1.5e+02 Score=23.33 Aligned_cols=14 Identities=21% Similarity=0.321 Sum_probs=7.3
Q ss_pred HHhhhhHHHHHHHH
Q 037750 118 TFRRRAKYFLATQL 131 (160)
Q Consensus 118 ~~~rr~~~~~~~a~ 131 (160)
.++||+|+++++.+
T Consensus 16 ~l~r~~~~ill~~l 29 (226)
T TIGR01006 16 KLWKRKLLILIVAL 29 (226)
T ss_pred HHHHHHHHHHHHHH
Confidence 35666665554433
Done!