BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037755
(238 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 123/237 (51%), Gaps = 17/237 (7%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
+F EV I H N+++L GFC ++R LVY +M NGS+ + + W K
Sbjct: 81 QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPK 140
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS 130
+A G+A G+ YLH+ CD I+H D+K NILLD F V DFGLAK ++ V
Sbjct: 141 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX 200
Query: 131 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNL-KATRSSKAYFP 189
A RGTIG+IAPE +S G S K+DV+G+G++LLE+ G+R +L +
Sbjct: 201 -XAVRGTIGHIAPEYLST--GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 257
Query: 190 SWVSDQLNKGGNLELRNVT--------EIESMIARKLCVIGLWCIQVKPADRPSMTK 238
WV L + L +V E+E +I + L C Q P +RP M++
Sbjct: 258 DWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQ-----VALLCTQSSPMERPKMSE 309
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 140 bits (353), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 86/245 (35%), Positives = 125/245 (51%), Gaps = 17/245 (6%)
Query: 3 ENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESR 62
E ++ +F EV I H N+++L GFC ++R LVY +M NGS+ + +
Sbjct: 65 ERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPES 124
Query: 63 GQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFH 122
W K +A G+A G+ YLH+ CD I+H D+K NILLD F V DFGLAK
Sbjct: 125 QPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 184
Query: 123 PKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNL-KAT 181
++ V A RG IG+IAPE +S G S K+DV+G+G++LLE+ G+R +L +
Sbjct: 185 DYKDXHVX-XAVRGXIGHIAPEYLST--GKSSEKTDVFGYGVMLLELITGQRAFDLARLA 241
Query: 182 RSSKAYFPSWVSDQLNKGGNLELRNVT--------EIESMIARKLCVIGLWCIQVKPADR 233
WV L + L +V E+E +I + L C Q P +R
Sbjct: 242 NDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQ-----VALLCTQSSPMER 296
Query: 234 PSMTK 238
P M++
Sbjct: 297 PKMSE 301
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 117/216 (54%), Gaps = 9/216 (4%)
Query: 24 HVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIE 83
H ++V L+GFC E ++ L+Y++M NG+L RH++ + S SWE+ E+ G A G+
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLH 153
Query: 84 YLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAP 143
YLH I+H D+K NILLD NFVP ++DFG++K + + +GT+GYI P
Sbjct: 154 YLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDP 210
Query: 144 ELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKATRSSKAYFPSWVSDQLNKGGNLE 203
E + G ++ KSDVY FG+VL E+ R++ +++ W + N G +
Sbjct: 211 EYFIK--GRLTEKSDVYSFGVVLFEVLCA-RSAIVQSLPREMVNLAEWAVESHNNGQLEQ 267
Query: 204 LRN---VTEIESMIARKLCVIGLWCIQVKPADRPSM 236
+ + +I RK + C+ + DRPSM
Sbjct: 268 IVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSM 303
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 128 bits (322), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 116/216 (53%), Gaps = 9/216 (4%)
Query: 24 HVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIE 83
H ++V L+GFC E ++ L+Y++M NG+L RH++ + S SWE+ E+ G A G+
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLH 153
Query: 84 YLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAP 143
YLH I+H D+K NILLD NFVP ++DFG++K + +GT+GYI P
Sbjct: 154 YLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDP 210
Query: 144 ELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKATRSSKAYFPSWVSDQLNKGGNLE 203
E + G ++ KSDVY FG+VL E+ R++ +++ W + N G +
Sbjct: 211 EYFIK--GRLTEKSDVYSFGVVLFEVLCA-RSAIVQSLPREMVNLAEWAVESHNNGQLEQ 267
Query: 204 LRN---VTEIESMIARKLCVIGLWCIQVKPADRPSM 236
+ + +I RK + C+ + DRPSM
Sbjct: 268 IVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSM 303
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 117/244 (47%), Gaps = 37/244 (15%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGS-LDRHIFPKESRGQSC-- 66
++F E+ + + H N+V+LLGF S+G LVY +MPNGS LDR SC
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDR---------LSCLD 125
Query: 67 -----SWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
SW ++A G A+GI +LH + H DIK NILLD F +SDFGLA+
Sbjct: 126 GTPPLSWHMRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARA 182
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG-------RR 174
K V S GT Y+APE + G ++ KSD+Y FG+VLLE+ G R
Sbjct: 183 SEKFAQTVMXSRIVGTTAYMAPEALR---GEITPKSDIYSFGVVLLEIITGLPAVDEHRE 239
Query: 175 NSNLKATRSSKAYFPSWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVKPADRP 234
L + + D ++K N + T +E+M + + C+ K RP
Sbjct: 240 PQLLLDIKEEIEDEEKTIEDYIDKKMNDA--DSTSVEAMYS-----VASQCLHEKKNKRP 292
Query: 235 SMTK 238
+ K
Sbjct: 293 DIKK 296
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 114 bits (284), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 116/244 (47%), Gaps = 37/244 (15%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGS-LDRHIFPKESRGQSC-- 66
++F E+ + + H N+V+LLGF S+G LVY +MPNGS LDR SC
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDR---------LSCLD 119
Query: 67 -----SWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
SW ++A G A+GI +LH + H DIK NILLD F +SDFGLA+
Sbjct: 120 GTPPLSWHMRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARA 176
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG-------RR 174
K V GT Y+APE + G ++ KSD+Y FG+VLLE+ G R
Sbjct: 177 SEKFAQXVMXXRIVGTTAYMAPEALR---GEITPKSDIYSFGVVLLEIITGLPAVDEHRE 233
Query: 175 NSNLKATRSSKAYFPSWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVKPADRP 234
L + + D ++K N + T +E+M + + C+ K RP
Sbjct: 234 PQLLLDIKEEIEDEEKTIEDYIDKKMNDA--DSTSVEAMYS-----VASQCLHEKKNKRP 286
Query: 235 SMTK 238
+ K
Sbjct: 287 DIKK 290
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 114 bits (284), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 116/244 (47%), Gaps = 37/244 (15%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGS-LDRHIFPKESRGQSC-- 66
++F E+ + + H N+V+LLGF S+G LVY +MPNGS LDR SC
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDR---------LSCLD 125
Query: 67 -----SWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
SW ++A G A+GI +LH + H DIK NILLD F +SDFGLA+
Sbjct: 126 GTPPLSWHMRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARA 182
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG-------RR 174
K V GT Y+APE + G ++ KSD+Y FG+VLLE+ G R
Sbjct: 183 SEKFAQTVMXXRIVGTTAYMAPEALR---GEITPKSDIYSFGVVLLEIITGLPAVDEHRE 239
Query: 175 NSNLKATRSSKAYFPSWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVKPADRP 234
L + + D ++K N + T +E+M + + C+ K RP
Sbjct: 240 PQLLLDIKEEIEDEEKTIEDYIDKKMNDA--DSTSVEAMYS-----VASQCLHEKKNKRP 292
Query: 235 SMTK 238
+ K
Sbjct: 293 DIKK 296
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 111 bits (277), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 90/171 (52%), Gaps = 23/171 (13%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSL-DRHIFPKESRGQSC-- 66
++F E+ + H N+V+LLGF S+G LVY + PNGSL DR SC
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDR---------LSCLD 116
Query: 67 -----SWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
SW ++A G A+GI +LH + H DIK NILLD F +SDFGLA+
Sbjct: 117 GTPPLSWHXRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARA 173
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
K V S GT Y APE + G ++ KSD+Y FG+VLLE+ G
Sbjct: 174 SEKFAQXVXXSRIVGTTAYXAPEALR---GEITPKSDIYSFGVVLLEIITG 221
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 95/173 (54%), Gaps = 9/173 (5%)
Query: 1 MLENSKFSAE---EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIF 57
+L F AE EF+ EV+ + R+ H N+V +G ++ ++V E++ GSL R +
Sbjct: 67 ILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLH 126
Query: 58 PKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG 117
+R Q +L +A A G+ YLHN + I+H ++K N+L+D + V DFG
Sbjct: 127 KSGAREQLDERRRL-SMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFG 184
Query: 118 LAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
L++ K + F+S + GT ++APE++ + KSDVY FG++L E+
Sbjct: 185 LSRL--KASTFLSSKSAAGTPEWMAPEVLRDE--PSNEKSDVYSFGVILWELA 233
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 1 MLENSKFSAE---EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIF 57
+L F AE EF+ EV+ + R+ H N+V +G ++ ++V E++ GSL R +
Sbjct: 67 ILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLH 126
Query: 58 PKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG 117
+R Q +L +A A G+ YLHN + I+H D+K N+L+D + V DFG
Sbjct: 127 KSGAREQLDERRRL-SMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFG 184
Query: 118 LAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
L++ K + F+ GT ++APE++ + KSDVY FG++L E+
Sbjct: 185 LSRL--KASXFLXSKXAAGTPEWMAPEVLRDE--PSNEKSDVYSFGVILWELA 233
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 89/168 (52%), Gaps = 9/168 (5%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
+ S E+FI E + ++ H +VQL G C E + LV+EFM +G L ++ +
Sbjct: 42 IREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL--RTQ 99
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
RG + E L + G+ YL + C++H D+ N L+ N V VSDFG+ +F
Sbjct: 100 RGLFAA-ETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRF 155
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
++ + S + T+ + + +PE+ S F S KSDV+ FG+++ E+
Sbjct: 156 -VLDDQYTSSTGTKFPVKWASPEVFS--FSRYSSKSDVWSFGVLMWEV 200
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 89/168 (52%), Gaps = 9/168 (5%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
+ S E+FI E + ++ H +VQL G C E + LV+EFM +G L ++ +
Sbjct: 37 IREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL--RTQ 94
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
RG + E L + G+ YL + C++H D+ N L+ N V VSDFG+ +F
Sbjct: 95 RGLFAA-ETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRF 150
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
++ + S + T+ + + +PE+ S F S KSDV+ FG+++ E+
Sbjct: 151 -VLDDQYTSSTGTKFPVKWASPEVFS--FSRYSSKSDVWSFGVLMWEV 195
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 89/168 (52%), Gaps = 9/168 (5%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
+ S E+FI E + ++ H +VQL G C E + LV+EFM +G L ++ +
Sbjct: 39 IREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL--RTQ 96
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
RG + E L + G+ YL + C++H D+ N L+ N V VSDFG+ +F
Sbjct: 97 RGLFAA-ETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRF 152
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
++ + S + T+ + + +PE+ S F S KSDV+ FG+++ E+
Sbjct: 153 -VLDDQYTSSTGTKFPVKWASPEVFS--FSRYSSKSDVWSFGVLMWEV 197
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 90/168 (53%), Gaps = 9/168 (5%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
++ S ++FI E + ++ H +VQL G C E + LV+EFM +G L ++ +
Sbjct: 59 IKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL--RTQ 116
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
RG + E L + G+ YL + C++H D+ N L+ N V VSDFG+ +F
Sbjct: 117 RGLFAA-ETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRF 172
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
++ + S + T+ + + +PE+ S F S KSDV+ FG+++ E+
Sbjct: 173 -VLDDQYTSSTGTKFPVKWASPEVFS--FSRYSSKSDVWSFGVLMWEV 217
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 89/161 (55%), Gaps = 11/161 (6%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
+F++E S +G+ H N+++L G + G +V E+M NGSLD F + GQ + +
Sbjct: 96 DFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLD--TFLRTHDGQ-FTIMQ 152
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS 130
L + G G+ YL D+ +H D+ N+L+D N V VSDFGL++ + D +
Sbjct: 153 LVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD-AA 208
Query: 131 ISATRGTIG--YIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ T G I + APE I+ F T S SDV+ FG+V+ E+
Sbjct: 209 XTTTGGKIPIRWTAPEAIA--FRTFSSASDVWSFGVVMWEV 247
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 89/161 (55%), Gaps = 11/161 (6%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
+F++E S +G+ H N+++L G + G +V E+M NGSLD F + GQ + +
Sbjct: 96 DFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLD--TFLRTHDGQ-FTIMQ 152
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS 130
L + G G+ YL D+ +H D+ N+L+D N V VSDFGL++ + D +
Sbjct: 153 LVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD-AA 208
Query: 131 ISATRGTIG--YIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ T G I + APE I+ F T S SDV+ FG+V+ E+
Sbjct: 209 YTTTGGKIPIRWTAPEAIA--FRTFSSASDVWSFGVVMWEV 247
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 88/168 (52%), Gaps = 9/168 (5%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
+ S E+FI E + ++ H +VQL G C E + LV EFM +G L ++ +
Sbjct: 40 IREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYL--RTQ 97
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
RG + E L + G+ YL + C++H D+ N L+ N V VSDFG+ +F
Sbjct: 98 RGLFAA-ETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRF 153
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
++ + S + T+ + + +PE+ S F S KSDV+ FG+++ E+
Sbjct: 154 -VLDDQYTSSTGTKFPVKWASPEVFS--FSRYSSKSDVWSFGVLMWEV 198
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+ F NEV + + HVN++ +G+ S + A+V ++ SL H+ E++ +
Sbjct: 49 QAFKNEVGVLRKTRHVNILLFMGY-STAPQLAIVTQWCEGSSLYHHLHIIETKFEMI--- 104
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
KL ++A TA G++YLH I+H D+K +NI L + + DFGLA + +
Sbjct: 105 KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 161
Query: 130 SISATRGTIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLE-MTGGRRNSNL 178
G+I ++APE+I ++ S +SDVY FG+VL E MTG SN+
Sbjct: 162 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 212
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 112/241 (46%), Gaps = 29/241 (12%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ EEF+ E + + I H N+VQLLG C+ +V E+MP G+L ++ +E
Sbjct: 65 LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL--REC 122
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
+ + L +A+ + +EYL +H D+ N L+ N V V+DFGL++
Sbjct: 123 NREEVTAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHVVKVADFGLSRL 179
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKAT 181
+ + + + + I + APE ++ N T S KSDV+ FG++L E+ AT
Sbjct: 180 MTGDT-YTAHAGAKFPIKWTAPESLAYN--TFSIKSDVWAFGVLLWEI----------AT 226
Query: 182 RSSKAYFP----SWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVKPADRPSMT 237
Y P S V D L KG +E K+ + C + PADRPS
Sbjct: 227 YGMSPY-PGIDLSQVYDLLEKGYRMEQ------PEGCPPKVYELMRACWKWSPADRPSFA 279
Query: 238 K 238
+
Sbjct: 280 E 280
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 94/171 (54%), Gaps = 9/171 (5%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+ F NEV + + HVN++ +G+ ++ + A+V ++ SL H+ E++ + +
Sbjct: 53 QAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHASETKFEM---K 108
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
KL ++A TA G++YLH I+H D+K +NI L + + DFGLA + +
Sbjct: 109 KLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSH 165
Query: 130 SISATRGTIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLE-MTGGRRNSNL 178
G+I ++APE+I ++ S +SDVY FG+VL E MTG SN+
Sbjct: 166 QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNI 216
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+ F NEV + + HVN++ +G+ ++ + A+V ++ SL H+ E++ +
Sbjct: 49 QAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI--- 104
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
KL ++A TA G++YLH I+H D+K +NI L + + DFGLA + +
Sbjct: 105 KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 161
Query: 130 SISATRGTIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLE-MTGGRRNSNL 178
G+I ++APE+I ++ S +SDVY FG+VL E MTG SN+
Sbjct: 162 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 212
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 92/164 (56%), Gaps = 8/164 (4%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+ F NEV+ + + HVN++ +G+ ++ + A+V ++ SL +H+ +E++ Q
Sbjct: 77 QAFRNEVAVLRKTRHVNILLFMGYMTKDN-LAIVTQWCEGSSLYKHLHVQETKFQMF--- 132
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
+L ++A TA G++YLH I+H D+K +NI L + DFGLA + +
Sbjct: 133 QLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189
Query: 130 SISATRGTIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLEMTGG 172
+ G++ ++APE+I ++ S +SDVY +G+VL E+ G
Sbjct: 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG 233
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+ F NEV + + HVN++ +G+ ++ + A+V ++ SL H+ E++ +
Sbjct: 51 QAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI--- 106
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
KL ++A TA G++YLH I+H D+K +NI L + + DFGLA + +
Sbjct: 107 KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 163
Query: 130 SISATRGTIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLE-MTGGRRNSNL 178
G+I ++APE+I ++ S +SDVY FG+VL E MTG SN+
Sbjct: 164 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 214
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+ F NEV + + HVN++ +G+ ++ + A+V ++ SL H+ E++ +
Sbjct: 54 QAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI--- 109
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
KL ++A TA G++YLH I+H D+K +NI L + + DFGLA + +
Sbjct: 110 KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 166
Query: 130 SISATRGTIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLE-MTGGRRNSNL 178
G+I ++APE+I ++ S +SDVY FG+VL E MTG SN+
Sbjct: 167 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 217
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+ F NEV + + HVN++ +G+ ++ + A+V ++ SL H+ E++ +
Sbjct: 54 QAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI--- 109
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
KL ++A TA G++YLH I+H D+K +NI L + + DFGLA + +
Sbjct: 110 KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 166
Query: 130 SISATRGTIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLE-MTGGRRNSNL 178
G+I ++APE+I ++ S +SDVY FG+VL E MTG SN+
Sbjct: 167 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 217
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+ F NEV + + HVN++ +G+ ++ + A+V ++ SL H+ E++ +
Sbjct: 77 QAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI--- 132
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
KL ++A TA G++YLH I+H D+K +NI L + + DFGLA + +
Sbjct: 133 KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 189
Query: 130 SISATRGTIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLE-MTGGRRNSNL 178
G+I ++APE+I ++ S +SDVY FG+VL E MTG SN+
Sbjct: 190 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 240
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+ F NEV + + HVN++ +G+ ++ + A+V ++ SL H+ E++ +
Sbjct: 76 QAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI--- 131
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
KL ++A TA G++YLH I+H D+K +NI L + + DFGLA + +
Sbjct: 132 KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 188
Query: 130 SISATRGTIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLE-MTGGRRNSNL 178
G+I ++APE+I ++ S +SDVY FG+VL E MTG SN+
Sbjct: 189 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 239
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+ F NEV + + HVN++ +G+ S + A+V ++ SL H+ E++ + +
Sbjct: 65 QAFKNEVGVLRKTRHVNILLFMGY-STAPQLAIVTQWCEGSSLYHHLHASETKFEM---K 120
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
KL ++A TA G++YLH I+H D+K +NI L + + DFGLA + +
Sbjct: 121 KLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSH 177
Query: 130 SISATRGTIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLE-MTGGRRNSNL 178
G+I ++APE+I ++ S +SDVY FG+VL E MTG SN+
Sbjct: 178 QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNI 228
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 94/171 (54%), Gaps = 9/171 (5%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+ F NEV + + HVN++ +G+ ++ + A+V ++ SL H+ E++ + +
Sbjct: 65 QAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHASETKFEM---K 120
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
KL ++A TA G++YLH I+H D+K +NI L + + DFGLA + +
Sbjct: 121 KLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSH 177
Query: 130 SISATRGTIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLE-MTGGRRNSNL 178
G+I ++APE+I ++ S +SDVY FG+VL E MTG SN+
Sbjct: 178 QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNI 228
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+ F NEV + + HVN++ +G+ ++ + A+V ++ SL H+ E++ +
Sbjct: 49 QAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI--- 104
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
KL ++A TA G++YLH I+H D+K +NI L + + DFGLA + +
Sbjct: 105 KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSH 161
Query: 130 SISATRGTIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLE-MTGGRRNSNL 178
G+I ++APE+I ++ S +SDVY FG+VL E MTG SN+
Sbjct: 162 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 212
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+ F NEV + + HVN++ +G+ ++ + A+V ++ SL H+ E++ +
Sbjct: 69 QAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI--- 124
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
KL ++A TA G++YLH I+H D+K +NI L + + DFGLA + +
Sbjct: 125 KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSH 181
Query: 130 SISATRGTIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLE-MTGGRRNSNL 178
G+I ++APE+I ++ S +SDVY FG+VL E MTG SN+
Sbjct: 182 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 232
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+ F NEV + + HVN++ +G+ ++ + A+V ++ SL H+ E++ +
Sbjct: 77 QAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI--- 132
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
KL ++A TA G++YLH I+H D+K +NI L + + DFGLA + +
Sbjct: 133 KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSH 189
Query: 130 SISATRGTIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLE-MTGGRRNSNL 178
G+I ++APE+I ++ S +SDVY FG+VL E MTG SN+
Sbjct: 190 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 240
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 94/168 (55%), Gaps = 12/168 (7%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
+F++E S +G+ H NV+ L G ++ + ++ EFM NGSLD F +++ GQ +
Sbjct: 80 DFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS--FLRQNDGQFTVIQ- 136
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKE-NDFV 129
L + G A G++YL D+ +H D+ NIL++ N V VSDFGL++F + +D
Sbjct: 137 LVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPT 193
Query: 130 SISATRGTIG--YIAPELISRNFGTVSCKSDVYGFGMVLLE-MTGGRR 174
SA G I + APE I + + SDV+ +G+V+ E M+ G R
Sbjct: 194 YTSALGGKIPIRWTAPEAI--QYRKFTSASDVWSYGIVMWEVMSYGER 239
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 109/240 (45%), Gaps = 27/240 (11%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ EEF+ E + + I H N+VQLLG C+ ++ EFM G+L ++ +E
Sbjct: 44 LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--REC 101
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
Q S L +A+ + +EYL +H D+ N L+ N + V+DFGL++
Sbjct: 102 NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL 158
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKAT 181
+ F + + + I + APE ++ N S KSDV+ FG++L E+ AT
Sbjct: 159 MTGDT-FTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEI----------AT 205
Query: 182 RSSKAY---FPSWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVKPADRPSMTK 238
Y PS V + L K +E K+ + C Q P+DRPS +
Sbjct: 206 YGMSPYPGIDPSQVYELLEKDYRMER------PEGCPEKVYELMRACWQWNPSDRPSFAE 259
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 88/168 (52%), Gaps = 9/168 (5%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
+ S E+FI E + ++ H +VQL G C E + LV+EFM +G L ++ +
Sbjct: 39 IREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL--RTQ 96
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
RG + E L + G+ YL + ++H D+ N L+ N V VSDFG+ +F
Sbjct: 97 RGLFAA-ETLLGMCLDVCEGMAYLE---EASVIHRDLAARNCLVGENQVIKVSDFGMTRF 152
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
++ + S + T+ + + +PE+ S F S KSDV+ FG+++ E+
Sbjct: 153 -VLDDQYTSSTGTKFPVKWASPEVFS--FSRYSSKSDVWSFGVLMWEV 197
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 90/163 (55%), Gaps = 13/163 (7%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
+F+ E S +G+ H N++ L G ++ +V E+M NGSLD F K++ GQ +
Sbjct: 69 DFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLD--TFLKKNDGQFTVIQ- 125
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS 130
L + G + G++YL D+ +H D+ NIL++ N V VSDFGL++ E+D +
Sbjct: 126 LVGMLRGISAGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEA 180
Query: 131 ISATRG---TIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
TRG I + APE I+ F + SDV+ +G+V+ E+
Sbjct: 181 AYTTRGGKIPIRWTAPEAIA--FRKFTSASDVWSYGIVMWEVV 221
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 93/168 (55%), Gaps = 14/168 (8%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
+F+ E +G+ H N+++L G S+ ++ E+M NG+LD+ F +E G+ S +
Sbjct: 92 DFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDK--FLREKDGE-FSVLQ 148
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS 130
L + G A G++YL N + +H D+ NIL++ N V VSDFGL++ E+D +
Sbjct: 149 LVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVL--EDDPEA 203
Query: 131 ISATRG---TIGYIAPELISRNFGTVSCKSDVYGFGMVLLE-MTGGRR 174
T G I + APE IS + + SDV+ FG+V+ E MT G R
Sbjct: 204 TYTTSGGKIPIRWTAPEAIS--YRKFTSASDVWSFGIVMWEVMTYGER 249
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 92/168 (54%), Gaps = 14/168 (8%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
+F+ E S +G+ H N+++L G ++ +V E+M NGSLD + +++ +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---Q 148
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS 130
L + G A G++YL D+ +H D+ NIL++ N V VSDFGLA+ E+D +
Sbjct: 149 LVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVL--EDDPEA 203
Query: 131 ISATRG---TIGYIAPELISRNFGTVSCKSDVYGFGMVLLE-MTGGRR 174
TRG I + +PE I+ + + SDV+ +G+VL E M+ G R
Sbjct: 204 AYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 89/169 (52%), Gaps = 9/169 (5%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ S E F+ E + +I H +VQL SE +V E+M GSL F K
Sbjct: 50 LKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL--LDFLKGE 106
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
G+ +L ++A+ A G+ Y+ + +H D++ NIL+ N V V+DFGLA+
Sbjct: 107 MGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL 163
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
++N++ + + I + APE + +G + KSDV+ FG++L E+T
Sbjct: 164 I-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIKSDVWSFGILLTELT 209
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 93/168 (55%), Gaps = 12/168 (7%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
+F++E S +G+ H NV+ L G ++ + ++ EFM NGSLD F +++ GQ +
Sbjct: 54 DFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS--FLRQNDGQFTVIQ- 110
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKE-NDFV 129
L + G A G++YL D+ +H + NIL++ N V VSDFGL++F + +D
Sbjct: 111 LVGMLRGIAAGMKYL---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPT 167
Query: 130 SISATRGTIG--YIAPELISRNFGTVSCKSDVYGFGMVLLE-MTGGRR 174
SA G I + APE I + + SDV+ +G+V+ E M+ G R
Sbjct: 168 YTSALGGKIPIRWTAPEAI--QYRKFTSASDVWSYGIVMWEVMSYGER 213
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 92/168 (54%), Gaps = 14/168 (8%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
+F+ E S +G+ H N+++L G ++ +V E+M NGSLD + +++ +
Sbjct: 63 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---Q 119
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS 130
L + G A G++YL D+ +H D+ NIL++ N V VSDFGL++ E+D +
Sbjct: 120 LVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEA 174
Query: 131 ISATRG---TIGYIAPELISRNFGTVSCKSDVYGFGMVLLE-MTGGRR 174
TRG I + +PE I+ + + SDV+ +G+VL E M+ G R
Sbjct: 175 AYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVMSYGER 220
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 92/168 (54%), Gaps = 14/168 (8%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
+F+ E S +G+ H N+++L G ++ +V E+M NGSLD + +++ +
Sbjct: 80 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---Q 136
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS 130
L + G A G++YL D+ +H D+ NIL++ N V VSDFGL++ E+D +
Sbjct: 137 LVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEA 191
Query: 131 ISATRG---TIGYIAPELISRNFGTVSCKSDVYGFGMVLLE-MTGGRR 174
TRG I + +PE I+ + + SDV+ +G+VL E M+ G R
Sbjct: 192 AYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVMSYGER 237
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 108/240 (45%), Gaps = 27/240 (11%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ EEF+ E + + I H N+VQLLG C+ ++ EFM G+L ++ +E
Sbjct: 44 LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--REC 101
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
Q S L +A+ + +EYL +H D+ N L+ N + V+DFGL++
Sbjct: 102 NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL 158
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKAT 181
+ + + + I + APE ++ N S KSDV+ FG++L E+ AT
Sbjct: 159 MTGDTX-TAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEI----------AT 205
Query: 182 RSSKAY---FPSWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVKPADRPSMTK 238
Y PS V + L K +E K+ + C Q P+DRPS +
Sbjct: 206 YGMSPYPGIDPSQVYELLEKDYRMER------PEGCPEKVYELMRACWQWNPSDRPSFAE 259
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 92/168 (54%), Gaps = 14/168 (8%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
+F+ E S +G+ H N+++L G ++ +V E+M NGSLD + +++ +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---Q 148
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS 130
L + G A G++YL D+ +H D+ NIL++ N V VSDFGL++ E+D +
Sbjct: 149 LVGMLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEA 203
Query: 131 ISATRG---TIGYIAPELISRNFGTVSCKSDVYGFGMVLLE-MTGGRR 174
TRG I + +PE I+ + + SDV+ +G+VL E M+ G R
Sbjct: 204 AYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 107/240 (44%), Gaps = 27/240 (11%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ EEF+ E + + I H N+VQLLG C+ ++ EFM G+L ++ +E
Sbjct: 44 LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--REC 101
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
Q S L +A+ + +EYL +H D+ N L+ N + V+DFGL++
Sbjct: 102 NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL 158
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKAT 181
+ A + I + APE ++ N S KSDV+ FG++L E+ AT
Sbjct: 159 MTGDTXTAHAGA-KFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEI----------AT 205
Query: 182 RSSKAY---FPSWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVKPADRPSMTK 238
Y PS V + L K +E K+ + C Q P+DRPS +
Sbjct: 206 YGMSPYPGIDPSQVYELLEKDYRMER------PEGCPEKVYELMRACWQWNPSDRPSFAE 259
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 90/168 (53%), Gaps = 14/168 (8%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
+F+ E S +G+ H NVV L G + G +V EFM NG+LD F ++ GQ +
Sbjct: 90 DFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALD--AFLRKHDGQFTVIQ- 146
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS 130
L + G A G+ YL D+ +H D+ NIL++ N V VSDFGL++ E+D +
Sbjct: 147 LVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRV--IEDDPEA 201
Query: 131 ISATRG---TIGYIAPELISRNFGTVSCKSDVYGFGMVLLE-MTGGRR 174
+ T G + + APE I + + SDV+ +G+V+ E M+ G R
Sbjct: 202 VYTTTGGKIPVRWTAPEAI--QYRKFTSASDVWSYGIVMWEVMSYGER 247
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 92/168 (54%), Gaps = 14/168 (8%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
+F+ E S +G+ H N+++L G ++ +V E+M NGSLD + +++ +
Sbjct: 90 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---Q 146
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS 130
L + G A G++YL D+ +H D+ NIL++ N V VSDFGL++ E+D +
Sbjct: 147 LVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEA 201
Query: 131 ISATRG---TIGYIAPELISRNFGTVSCKSDVYGFGMVLLE-MTGGRR 174
TRG I + +PE I+ + + SDV+ +G+VL E M+ G R
Sbjct: 202 AYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVMSYGER 247
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 90/173 (52%), Gaps = 9/173 (5%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ S E F+ E + ++ H +VQL SE +V E+M GSL F K
Sbjct: 43 LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL--LDFLKGE 99
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
G+ +L ++A+ A G+ Y+ + +H D++ NIL+ N V V+DFGLA+
Sbjct: 100 TGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL 156
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRR 174
++N++ + + I + APE + +G + KSDV+ FG++L E+T R
Sbjct: 157 I-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIKSDVWSFGILLTELTTKGR 206
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 90/173 (52%), Gaps = 9/173 (5%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ S E F+ E + ++ H +VQL SE +V E+M GSL F K
Sbjct: 41 LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL--LDFLKGE 97
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
G+ +L ++A+ A G+ Y+ + +H D++ NIL+ N V V+DFGLA+
Sbjct: 98 MGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL 154
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRR 174
++N++ + + I + APE + +G + KSDV+ FG++L E+T R
Sbjct: 155 I-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIKSDVWSFGILLTELTTKGR 204
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 89/169 (52%), Gaps = 9/169 (5%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ S E F+ E + ++ H +VQL SE +V E+M GSL F K
Sbjct: 50 LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLD--FLKGE 106
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
G+ +L ++A+ A G+ Y+ + +H D++ NIL+ N V V+DFGLA+
Sbjct: 107 MGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL 163
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
++N++ + + I + APE + +G + KSDV+ FG++L E+T
Sbjct: 164 I-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIKSDVWSFGILLTELT 209
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 90/173 (52%), Gaps = 9/173 (5%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ S E F+ E + ++ H +VQL SE +V E+M GSL F K
Sbjct: 39 LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL--LDFLKGE 95
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
G+ +L ++A+ A G+ Y+ + +H D++ NIL+ N V V+DFGLA+
Sbjct: 96 MGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL 152
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRR 174
++N++ + + I + APE + +G + KSDV+ FG++L E+T R
Sbjct: 153 I-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIKSDVWSFGILLTELTTKGR 202
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 92/168 (54%), Gaps = 14/168 (8%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
+F+ E S +G+ H N+++L G ++ +V E+M NGSLD + +++ +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---Q 148
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS 130
L + G A G++YL D+ +H D+ NIL++ N V VSDFGL++ E+D +
Sbjct: 149 LVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEA 203
Query: 131 ISATRG---TIGYIAPELISRNFGTVSCKSDVYGFGMVLLE-MTGGRR 174
TRG I + +PE I+ + + SDV+ +G+VL E M+ G R
Sbjct: 204 AYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 92/168 (54%), Gaps = 14/168 (8%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
+F+ E S +G+ H N+++L G ++ +V E+M NGSLD + +++ +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---Q 148
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS 130
L + G A G++YL D+ +H D+ NIL++ N V VSDFGL++ E+D +
Sbjct: 149 LVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEA 203
Query: 131 ISATRG---TIGYIAPELISRNFGTVSCKSDVYGFGMVLLE-MTGGRR 174
TRG I + +PE I+ + + SDV+ +G+VL E M+ G R
Sbjct: 204 AYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 92/168 (54%), Gaps = 14/168 (8%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
+F+ E S +G+ H N+++L G ++ +V E+M NGSLD + +++ +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---Q 148
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS 130
L + G A G++YL D+ +H D+ NIL++ N V VSDFGL++ E+D +
Sbjct: 149 LVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEA 203
Query: 131 ISATRG---TIGYIAPELISRNFGTVSCKSDVYGFGMVLLE-MTGGRR 174
TRG I + +PE I+ + + SDV+ +G+VL E M+ G R
Sbjct: 204 AYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 92/168 (54%), Gaps = 14/168 (8%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
+F+ E S +G+ H N+++L G ++ +V E+M NGSLD + +++ +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---Q 148
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS 130
L + G A G++YL D+ +H D+ NIL++ N V VSDFGL++ E+D +
Sbjct: 149 LVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEA 203
Query: 131 ISATRG---TIGYIAPELISRNFGTVSCKSDVYGFGMVLLE-MTGGRR 174
TRG I + +PE I+ + + SDV+ +G+VL E M+ G R
Sbjct: 204 AYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 89/169 (52%), Gaps = 9/169 (5%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ S E F+ E + ++ H +VQL SE +V E+M GSL F K
Sbjct: 50 LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL--LDFLKGE 106
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
G+ +L ++A+ A G+ Y+ + +H D++ NIL+ N V V+DFGLA+
Sbjct: 107 MGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL 163
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
++N++ + + I + APE + +G + KSDV+ FG++L E+T
Sbjct: 164 I-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIKSDVWSFGILLTELT 209
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 91/168 (54%), Gaps = 14/168 (8%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
+F+ E S +G+ H N+++L G ++ +V E+M NGSLD + +++ +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---Q 148
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS 130
L + G A G++YL D+ +H D+ NIL++ N V VSDFGL + E+D +
Sbjct: 149 LVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVL--EDDPEA 203
Query: 131 ISATRG---TIGYIAPELISRNFGTVSCKSDVYGFGMVLLE-MTGGRR 174
TRG I + +PE I+ + + SDV+ +G+VL E M+ G R
Sbjct: 204 AYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 90/173 (52%), Gaps = 9/173 (5%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ S E F+ E + ++ H +VQL SE +V E+M GSL F K
Sbjct: 216 LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL--LDFLKGE 272
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
G+ +L ++A+ A G+ Y+ + +H D++ NIL+ N V V+DFGLA+
Sbjct: 273 TGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL 329
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRR 174
++N++ + + I + APE + +G + KSDV+ FG++L E+T R
Sbjct: 330 I-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 90/173 (52%), Gaps = 9/173 (5%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ S E F+ E + ++ H +VQL SE +V E+M GSL F K
Sbjct: 216 LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL--LDFLKGE 272
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
G+ +L ++A+ A G+ Y+ + +H D++ NIL+ N V V+DFGLA+
Sbjct: 273 TGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL 329
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRR 174
++N++ + + I + APE + +G + KSDV+ FG++L E+T R
Sbjct: 330 I-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 89/169 (52%), Gaps = 9/169 (5%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ S E F+ E + ++ H +VQL SE +V E+M GSL F K
Sbjct: 50 LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVCEYMSKGSL--LDFLKGE 106
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
G+ +L ++A+ A G+ Y+ + +H D++ NIL+ N V V+DFGLA+
Sbjct: 107 MGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL 163
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
++N++ + + I + APE + +G + KSDV+ FG++L E+T
Sbjct: 164 I-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIKSDVWSFGILLTELT 209
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 89/169 (52%), Gaps = 9/169 (5%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ S E F+ E + ++ H +VQL SE +V E+M GSL F K
Sbjct: 299 LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL--LDFLKGE 355
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
G+ +L ++A+ A G+ Y+ + +H D++ NIL+ N V V+DFGLA+
Sbjct: 356 TGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL 412
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
++N++ + + I + APE + +G + KSDV+ FG++L E+T
Sbjct: 413 I-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIKSDVWSFGILLTELT 458
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 8/169 (4%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ EEF+ E + + I H N+VQLLG C+ ++ EFM G+L ++ +E
Sbjct: 46 LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--REC 103
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
Q S L +A+ + +EYL +H D+ N L+ N + V+DFGL++
Sbjct: 104 NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL 160
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
+ + + + + I + APE ++ N S KSDV+ FG++L E+
Sbjct: 161 MTGDT-YTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIA 206
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 8/169 (4%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ EEF+ E + + I H N+VQLLG C+ ++ EFM G+L ++ +E
Sbjct: 51 LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--REC 108
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
Q S L +A+ + +EYL +H D+ N L+ N + V+DFGL++
Sbjct: 109 NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL 165
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
+ + + + + I + APE ++ N S KSDV+ FG++L E+
Sbjct: 166 MTGDT-YTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIA 211
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 8/169 (4%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ EEF+ E + + I H N+VQLLG C+ ++ EFM G+L ++ +E
Sbjct: 46 LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--REC 103
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
Q S L +A+ + +EYL +H D+ N L+ N + V+DFGL++
Sbjct: 104 NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL 160
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
+ + + + + I + APE ++ N S KSDV+ FG++L E+
Sbjct: 161 MTGDT-YTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIA 206
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 8/169 (4%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ EEF+ E + + I H N+VQLLG C+ ++ EFM G+L ++ +E
Sbjct: 46 LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--REC 103
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
Q S L +A+ + +EYL +H D+ N L+ N + V+DFGL++
Sbjct: 104 NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL 160
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
+ + + + + I + APE ++ N S KSDV+ FG++L E+
Sbjct: 161 MTGDT-YTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIA 206
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 8/169 (4%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ EEF+ E + + I H N+VQLLG C+ ++ EFM G+L ++ +E
Sbjct: 46 LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--REC 103
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
Q S L +A+ + +EYL +H D+ N L+ N + V+DFGL++
Sbjct: 104 NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL 160
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
+ + + + + I + APE ++ N S KSDV+ FG++L E+
Sbjct: 161 MTGDT-YTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIA 206
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 90/173 (52%), Gaps = 9/173 (5%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ S E F+ E + ++ H +VQL SE +V E+M GSL F K
Sbjct: 216 LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVGEYMSKGSL--LDFLKGE 272
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
G+ +L ++A+ A G+ Y+ + +H D++ NIL+ N V V+DFGLA+
Sbjct: 273 TGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL 329
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRR 174
++N++ + + I + APE + +G + KSDV+ FG++L E+T R
Sbjct: 330 I-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ S E F+ E + ++ H +VQL SE +V E+M GSL F K
Sbjct: 50 LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLD--FLKGE 106
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
G+ +L ++A+ A G+ Y+ + +H D+ NIL+ N V V+DFGLA+
Sbjct: 107 MGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLAAANILVGENLVCKVADFGLARL 163
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRR 174
++N++ + + I + APE + +G + KSDV+ FG++L E+T R
Sbjct: 164 I-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 93/168 (55%), Gaps = 12/168 (7%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
EF++E S +G+ H N+++L G + ++ EFM NG+LD F + + GQ + +
Sbjct: 61 EFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDS--FLRLNDGQ-FTVIQ 117
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS 130
L + G A G+ YL ++ +H D+ NIL++ N V VSDFGL++F + + +
Sbjct: 118 LVGMLRGIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPT 174
Query: 131 ISATRG---TIGYIAPELISRNFGTVSCKSDVYGFGMVLLE-MTGGRR 174
+++ G I + APE I+ F + SD + +G+V+ E M+ G R
Sbjct: 175 YTSSLGGKIPIRWTAPEAIA--FRKFTSASDAWSYGIVMWEVMSFGER 220
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 91/168 (54%), Gaps = 14/168 (8%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
+F+ E S +G+ H N+++L G ++ +V E M NGSLD + +++ +
Sbjct: 63 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI---Q 119
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS 130
L + G A G++YL D+ +H D+ NIL++ N V VSDFGL++ E+D +
Sbjct: 120 LVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEA 174
Query: 131 ISATRG---TIGYIAPELISRNFGTVSCKSDVYGFGMVLLE-MTGGRR 174
TRG I + +PE I+ + + SDV+ +G+VL E M+ G R
Sbjct: 175 AYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVMSYGER 220
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ S E F+ E + ++ H +VQL SE +V E+M GSL F K
Sbjct: 40 LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIXIVTEYMSKGSL--LDFLKGE 96
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
G+ +L ++A+ A G+ Y+ + +H D++ NIL+ N V V+DFGLA+
Sbjct: 97 TGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL 153
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRR 174
++N+ + + I + APE + +G + KSDV+ FG++L E+T R
Sbjct: 154 I-EDNEXTARQGAKFPIKWTAPE--AALYGRFTIKSDVWSFGILLTELTTKGR 203
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 90/168 (53%), Gaps = 14/168 (8%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
+F++E S +G+ H N++ L G ++ ++ E+M NGSLD + + R +
Sbjct: 61 DFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI---Q 117
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS 130
L + G G++YL D+ +H D+ NIL++ N V VSDFG+++ E+D +
Sbjct: 118 LVGMLRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVL--EDDPEA 172
Query: 131 ISATRG---TIGYIAPELISRNFGTVSCKSDVYGFGMVLLE-MTGGRR 174
TRG I + APE I+ + + SDV+ +G+V+ E M+ G R
Sbjct: 173 AYTTRGGKIPIRWTAPEAIA--YRKFTSASDVWSYGIVMWEVMSYGER 218
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 88/169 (52%), Gaps = 9/169 (5%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ S E F+ E + ++ H +VQL SE +V E+M GSL F K
Sbjct: 50 LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLD--FLKGE 106
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
G+ +L ++A+ A G+ Y+ + +H D++ NIL+ N V V+DFGLA+
Sbjct: 107 MGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL 163
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
++N+ + + I + APE + +G + KSDV+ FG++L E+T
Sbjct: 164 I-EDNEXTARQGAKFPIKWTAPE--AALYGRFTIKSDVWSFGILLTELT 209
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 88/169 (52%), Gaps = 9/169 (5%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ S E F+ E + ++ H +VQL SE +V E+M G L F K
Sbjct: 50 LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVMEYMSKGCLLD--FLKGE 106
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
G+ +L ++A+ A G+ Y+ + +H D++ NIL+ N V V+DFGLA+
Sbjct: 107 MGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL 163
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
++N++ + + I + APE + +G + KSDV+ FG++L E+T
Sbjct: 164 I-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIKSDVWSFGILLTELT 209
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 8/169 (4%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ EEF+ E + + I H N+VQLLG C+ ++ EFM G+L ++ +E
Sbjct: 47 LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--REC 104
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
Q + L +A+ + +EYL +H D+ N L+ N + V+DFGL++
Sbjct: 105 NRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL 161
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
+ + + + + I + APE ++ N S KSDV+ FG++L E+
Sbjct: 162 MTGDT-YTAPAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIA 207
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 91/168 (54%), Gaps = 14/168 (8%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
+F+ E S +G+ H N+++L G ++ +V E M NGSLD + +++ +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI---Q 148
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS 130
L + G A G++YL D+ +H D+ NIL++ N V VSDFGL++ E+D +
Sbjct: 149 LVGMLRGIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEA 203
Query: 131 ISATRG---TIGYIAPELISRNFGTVSCKSDVYGFGMVLLE-MTGGRR 174
TRG I + +PE I+ + + SDV+ +G+VL E M+ G R
Sbjct: 204 AYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 91/168 (54%), Gaps = 14/168 (8%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
+F+ E S +G+ H N+++L G ++ +V E M NGSLD + +++ +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI---Q 148
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS 130
L + G A G++YL D+ +H D+ NIL++ N V VSDFGL++ E+D +
Sbjct: 149 LVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEA 203
Query: 131 ISATRG---TIGYIAPELISRNFGTVSCKSDVYGFGMVLLE-MTGGRR 174
TRG I + +PE I+ + + SDV+ +G+VL E M+ G R
Sbjct: 204 AYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 90/173 (52%), Gaps = 9/173 (5%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ S E F+ E + ++ H +VQL SE +V E+M GSL F K
Sbjct: 47 LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSL--LDFLKGE 103
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
G+ +L ++++ A G+ Y+ + +H D++ NIL+ N V V+DFGLA+
Sbjct: 104 TGKYLRLPQLVDMSAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL 160
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRR 174
++N++ + + I + APE + +G + KSDV+ FG++L E+T R
Sbjct: 161 I-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIKSDVWSFGILLTELTTKGR 210
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 90/168 (53%), Gaps = 14/168 (8%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
+F++E S +G+ H N++ L G ++ ++ E+M NGSLD + + R +
Sbjct: 76 DFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI---Q 132
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS 130
L + G G++YL D+ +H D+ NIL++ N V VSDFG+++ E+D +
Sbjct: 133 LVGMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVL--EDDPEA 187
Query: 131 ISATRG---TIGYIAPELISRNFGTVSCKSDVYGFGMVLLE-MTGGRR 174
TRG I + APE I+ + + SDV+ +G+V+ E M+ G R
Sbjct: 188 AYTTRGGKIPIRWTAPEAIA--YRKFTSASDVWSYGIVMWEVMSYGER 233
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 90/168 (53%), Gaps = 14/168 (8%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
+F++E S +G+ H N++ L G ++ ++ E+M NGSLD + + R +
Sbjct: 55 DFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI---Q 111
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS 130
L + G G++YL D+ +H D+ NIL++ N V VSDFG+++ E+D +
Sbjct: 112 LVGMLRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVL--EDDPEA 166
Query: 131 ISATRG---TIGYIAPELISRNFGTVSCKSDVYGFGMVLLE-MTGGRR 174
TRG I + APE I+ + + SDV+ +G+V+ E M+ G R
Sbjct: 167 AYTTRGGKIPIRWTAPEAIA--YRKFTSASDVWSYGIVMWEVMSYGER 212
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 88/169 (52%), Gaps = 9/169 (5%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ S E F+ E + ++ H +VQL SE +V E+M G L F K
Sbjct: 50 LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGCL--LDFLKGE 106
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
G+ +L ++A+ A G+ Y+ + +H D++ NIL+ N V V+DFGLA+
Sbjct: 107 MGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL 163
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
++N++ + + I + APE + +G + KSDV+ FG++L E+T
Sbjct: 164 I-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIKSDVWSFGILLTELT 209
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 8/169 (4%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ EEF+ E + + I H N+VQLLG C+ ++ EFM G+L ++ +E
Sbjct: 48 LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--REC 105
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
Q + L +A+ + +EYL +H D+ N L+ N + V+DFGL++
Sbjct: 106 NRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL 162
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
+ + + + + I + APE ++ N S KSDV+ FG++L E+
Sbjct: 163 MTGDT-YTAPAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIA 208
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 91/168 (54%), Gaps = 12/168 (7%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
EF++E S +G+ H N+++L G + ++ EFM NG+LD F + + GQ + +
Sbjct: 63 EFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDS--FLRLNDGQ-FTVIQ 119
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF-HPKENDFV 129
L + G A G+ YL ++ +H D+ NIL++ N V VSDFGL++F +D
Sbjct: 120 LVGMLRGIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPT 176
Query: 130 SISATRGTIG--YIAPELISRNFGTVSCKSDVYGFGMVLLE-MTGGRR 174
S+ G I + APE I+ F + SD + +G+V+ E M+ G R
Sbjct: 177 ETSSLGGKIPIRWTAPEAIA--FRKFTSASDAWSYGIVMWEVMSFGER 222
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 8/169 (4%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ EEF+ E + + I H N+VQLLG C+ ++ EFM G+L ++ +E
Sbjct: 51 LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--REC 108
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
Q + L +A+ + +EYL +H D+ N L+ N + V+DFGL++
Sbjct: 109 NRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL 165
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
+ + + + + I + APE ++ N S KSDV+ FG++L E+
Sbjct: 166 MTGDT-YTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIA 211
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 88/169 (52%), Gaps = 9/169 (5%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ S E F+ E + ++ H +VQL SE +V E+M GSL F K
Sbjct: 217 LKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL--LDFLKGE 273
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
G+ +L ++A+ A G+ Y+ + +H D++ NIL+ N V V+DFGL +
Sbjct: 274 MGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLGRL 330
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
++N++ + + I + APE + +G + KSDV+ FG++L E+T
Sbjct: 331 I-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIKSDVWSFGILLTELT 376
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 8/169 (4%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ EEF+ E + + I H N+VQLLG C+ ++ EFM G+L ++ +E
Sbjct: 46 LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--REC 103
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
Q + L +A+ + +EYL +H D+ N L+ N + V+DFGL++
Sbjct: 104 NRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL 160
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
+ + + + + I + APE ++ N S KSDV+ FG++L E+
Sbjct: 161 MTGDT-YTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIA 206
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 8/169 (4%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ EEF+ E + + I H N+VQLLG C+ ++ EFM G+L ++ +E
Sbjct: 46 LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--REC 103
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
Q + L +A+ + +EYL +H D+ N L+ N + V+DFGL++
Sbjct: 104 NRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL 160
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
+ + + + + I + APE ++ N S KSDV+ FG++L E+
Sbjct: 161 MTGDT-YTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIA 206
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 8/169 (4%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ EEF+ E + + I H N+VQLLG C+ ++ EFM G+L ++ +E
Sbjct: 50 LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--REC 107
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
Q + L +A+ + +EYL +H D+ N L+ N + V+DFGL++
Sbjct: 108 NRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL 164
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
+ + + + + I + APE ++ N S KSDV+ FG++L E+
Sbjct: 165 MTGDT-YTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIA 210
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 90/173 (52%), Gaps = 9/173 (5%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ S E F+ E + ++ H +VQL SE +V E+M GSL F K
Sbjct: 47 LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSL--LDFLKGE 103
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
G+ +L ++++ A G+ Y+ + +H D++ NIL+ N V V+DFGLA+
Sbjct: 104 TGKYLRLPQLVDMSAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL 160
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRR 174
++N++ + + I + APE + +G + KSDV+ FG++L E+T R
Sbjct: 161 I-EDNEWTARQGAKFPIKWTAPE--AALYGRFTIKSDVWSFGILLTELTTKGR 210
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 8/169 (4%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ EEF+ E + + I H N+VQLLG C+ ++ EFM G+L ++ +E
Sbjct: 59 LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--REC 116
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
Q + L +A+ + +EYL +H D+ N L+ N + V+DFGL++
Sbjct: 117 NRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL 173
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
+ + + + + I + APE ++ N S KSDV+ FG++L E+
Sbjct: 174 MTGDT-YTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIA 219
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 86/168 (51%), Gaps = 8/168 (4%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ EEF+ E + + I H N+VQLLG C+ ++ EFM G+L ++ +E
Sbjct: 51 LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--REC 108
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
Q + L +A+ + +EYL +H D+ N L+ N + V+DFGL++
Sbjct: 109 NRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL 165
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ + + + + I + APE ++ N S KSDV+ FG++L E+
Sbjct: 166 MTGDT-YTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEI 210
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 8/169 (4%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ EEF+ E + + I H N+VQLLG C+ ++ EFM G+L ++ +E
Sbjct: 48 LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--REC 105
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
Q + L +A+ + +EYL +H D+ N L+ N + V+DFGL++
Sbjct: 106 NRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL 162
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
+ + + + + I + APE ++ N S KSDV+ FG++L E+
Sbjct: 163 MTGDT-YTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIA 208
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 8/169 (4%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ EEF+ E + + I H N+VQLLG C+ ++ EFM G+L ++ +E
Sbjct: 51 LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--REC 108
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
Q + L +A+ + +EYL +H D+ N L+ N + V+DFGL++
Sbjct: 109 NRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL 165
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
+ + + + + I + APE ++ N S KSDV+ FG++L E+
Sbjct: 166 MTGDT-YTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIA 211
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 8/169 (4%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ EEF+ E + + I H N+VQLLG C+ ++ EFM G+L ++ +E
Sbjct: 48 LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--REC 105
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
Q + L +A+ + +EYL +H D+ N L+ N + V+DFGL++
Sbjct: 106 NRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL 162
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
+ + + + + I + APE ++ N S KSDV+ FG++L E+
Sbjct: 163 MTGDT-YTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIA 208
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ S + F+ E + + ++ H +V+L ++ ++ E+M NGSL F K
Sbjct: 51 LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTP 107
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
G + KL ++A+ A G+ ++ + +H D++ NIL+ ++DFGLA+
Sbjct: 108 SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARL 164
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM-TGGR 173
++N++ + + I + APE I N+GT + KSDV+ FG++L E+ T GR
Sbjct: 165 I-EDNEYTAREGAKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 88/169 (52%), Gaps = 9/169 (5%)
Query: 1 MLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKE 60
M++ S +EFI E + + H +VQL G C++ ++ E+M NG L ++
Sbjct: 40 MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR 99
Query: 61 SRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK 120
R Q+ ++L E+ +EYL + LH D+ N L++ V VSDFGL++
Sbjct: 100 HRFQT---QQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSR 153
Query: 121 FHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ ++++ S ++ + + PE++ + S KSD++ FG+++ E+
Sbjct: 154 Y-VLDDEYTSSRGSKFPVRWSPPEVLM--YSKFSSKSDIWAFGVLMWEI 199
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ S + F+ E + + ++ H +V+L ++ ++ E+M NGSL F K
Sbjct: 50 LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTP 106
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
G + KL ++A+ A G+ ++ + +H D++ NIL+ ++DFGLA+
Sbjct: 107 SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARL 163
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM-TGGR 173
++N++ + + I + APE I N+GT + KSDV+ FG++L E+ T GR
Sbjct: 164 I-EDNEYTAREGAKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGR 213
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ S + F+ E + + ++ H +V+L ++ ++ E+M NGSL F K
Sbjct: 55 LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTP 111
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
G + KL ++A+ A G+ ++ + +H D++ NIL+ ++DFGLA+
Sbjct: 112 SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARL 168
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM-TGGR 173
++N++ + + I + APE I N+GT + KSDV+ FG++L E+ T GR
Sbjct: 169 I-EDNEYTAREGAKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGR 218
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ S + F+ E + + ++ H +V+L ++ ++ E+M NGSL F K
Sbjct: 45 LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTP 101
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
G + KL ++A+ A G+ ++ + +H D++ NIL+ ++DFGLA+
Sbjct: 102 SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARL 158
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM-TGGR 173
++N++ + + I + APE I N+GT + KSDV+ FG++L E+ T GR
Sbjct: 159 I-EDNEYTAREGAKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ S + F+ E + + ++ H +V+L ++ ++ E+M NGSL F K
Sbjct: 40 LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTP 96
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
G + KL ++A+ A G+ ++ + +H D++ NIL+ ++DFGLA+
Sbjct: 97 SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARL 153
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM-TGGR 173
++N++ + + I + APE I N+GT + KSDV+ FG++L E+ T GR
Sbjct: 154 I-EDNEYTAREGAKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGR 203
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 88/169 (52%), Gaps = 9/169 (5%)
Query: 1 MLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKE 60
M++ S +EFI E + + H +VQL G C++ ++ E+M NG L ++
Sbjct: 39 MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR 98
Query: 61 SRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK 120
R Q+ ++L E+ +EYL + LH D+ N L++ V VSDFGL++
Sbjct: 99 HRFQT---QQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSR 152
Query: 121 FHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ ++++ S ++ + + PE++ + S KSD++ FG+++ E+
Sbjct: 153 Y-VLDDEYTSSVGSKFPVRWSPPEVLM--YSKFSSKSDIWAFGVLMWEI 198
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 88/169 (52%), Gaps = 9/169 (5%)
Query: 1 MLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKE 60
M++ S +EFI E + + H +VQL G C++ ++ E+M NG L ++
Sbjct: 40 MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR 99
Query: 61 SRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK 120
R Q+ ++L E+ +EYL + LH D+ N L++ V VSDFGL++
Sbjct: 100 HRFQT---QQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSR 153
Query: 121 FHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ ++++ S ++ + + PE++ + S KSD++ FG+++ E+
Sbjct: 154 Y-VLDDEYTSSVGSKFPVRWSPPEVLM--YSKFSSKSDIWAFGVLMWEI 199
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 88/169 (52%), Gaps = 9/169 (5%)
Query: 1 MLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKE 60
M++ S +EFI E + + H +VQL G C++ ++ E+M NG L ++
Sbjct: 35 MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR 94
Query: 61 SRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK 120
R Q+ ++L E+ +EYL + LH D+ N L++ V VSDFGL++
Sbjct: 95 HRFQT---QQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSR 148
Query: 121 FHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ ++++ S ++ + + PE++ + S KSD++ FG+++ E+
Sbjct: 149 Y-VLDDEYTSSVGSKFPVRWSPPEVLM--YSKFSSKSDIWAFGVLMWEI 194
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 88/169 (52%), Gaps = 9/169 (5%)
Query: 1 MLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKE 60
M++ S +EFI E + + H +VQL G C++ ++ E+M NG L ++
Sbjct: 46 MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR 105
Query: 61 SRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK 120
R Q+ ++L E+ +EYL + LH D+ N L++ V VSDFGL++
Sbjct: 106 HRFQT---QQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSR 159
Query: 121 FHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ ++++ S ++ + + PE++ + S KSD++ FG+++ E+
Sbjct: 160 Y-VLDDEYTSSVGSKFPVRWSPPEVLM--YSKFSSKSDIWAFGVLMWEI 205
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 88/169 (52%), Gaps = 9/169 (5%)
Query: 1 MLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKE 60
M++ S +EFI E + + H +VQL G C++ ++ E+M NG L ++
Sbjct: 55 MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR 114
Query: 61 SRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK 120
R Q+ ++L E+ +EYL + LH D+ N L++ V VSDFGL++
Sbjct: 115 HRFQT---QQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSR 168
Query: 121 FHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ ++++ S ++ + + PE++ + S KSD++ FG+++ E+
Sbjct: 169 Y-VLDDEYTSSVGSKFPVRWSPPEVLM--YSKFSSKSDIWAFGVLMWEI 214
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 102/207 (49%), Gaps = 18/207 (8%)
Query: 1 MLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKE 60
M++ S +EF E T+ ++ H +V+ G CS+ +V E++ NG L ++
Sbjct: 39 MIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYL---R 95
Query: 61 SRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK 120
S G+ +L E+ G+ +L + +H D+ N L+D + VSDFG+ +
Sbjct: 96 SHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTR 152
Query: 121 FHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM-TGGRRNSN-- 177
+ ++ +VS T+ + + APE+ ++ S KSDV+ FG+++ E+ + G+ +
Sbjct: 153 Y-VLDDQYVSSVGTKFPVKWSAPEVF--HYFKYSSKSDVWAFGILMWEVFSLGKMPYDLY 209
Query: 178 ------LKATRSSKAYFPSWVSDQLNK 198
LK ++ + Y P SD + +
Sbjct: 210 TNSEVVLKVSQGHRLYRPHLASDTIYQ 236
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 108/237 (45%), Gaps = 21/237 (8%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ EEF+ E + + I H N+VQLLG C+ ++ EFM G+L ++ +E
Sbjct: 253 LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--REC 310
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
Q S L +A+ + +EYL +H ++ N L+ N + V+DFGL++
Sbjct: 311 NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRL 367
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKAT 181
+ + + + + I + APE ++ N S KSDV+ FG++L E+ AT
Sbjct: 368 MTGDT-YTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEI----------AT 414
Query: 182 RSSKAYFPSWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVKPADRPSMTK 238
Y P Q+ + LE E K+ + C Q P+DRPS +
Sbjct: 415 YGMSPY-PGIDLSQVYE--LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAE 468
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 8/169 (4%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ EEF+ E + + I H N+VQLLG C+ ++ EFM G+L ++ +E
Sbjct: 51 LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--REC 108
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
Q + L +A+ + +EYL +H D+ N L+ N + V+DFGL++
Sbjct: 109 NRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL 165
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
+ + + + I + APE ++ N S KSDV+ FG++L E+
Sbjct: 166 MTGDTX-TAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIA 211
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 8/169 (4%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ EEF+ E + + I H N+VQLLG C+ ++ EFM G+L ++ +E
Sbjct: 47 LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--REC 104
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
Q + L +A+ + +EYL +H D+ N L+ N + V+DFGL++
Sbjct: 105 NRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL 161
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
+ + + + I + APE ++ N S KSDV+ FG++L E+
Sbjct: 162 MTGDTX-TAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIA 207
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 15/195 (7%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ S + F+ E + + + H +V+L + ++ E+M GSL F K
Sbjct: 45 LKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSL--LDFLKSD 102
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
G KL + ++ A G+ Y+ +H D++ N+L+ + + ++DFGLA+
Sbjct: 103 EGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARV 159
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTG-------GRR 174
++N++ + + I + APE I NFG + KSDV+ FG++L E+ GR
Sbjct: 160 I-EDNEYTAREGAKFPIKWTAPEAI--NFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRT 216
Query: 175 NSNLKATRSSKAYFP 189
N+++ S P
Sbjct: 217 NADVMTALSQGYRMP 231
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 91/173 (52%), Gaps = 10/173 (5%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ S E F+ E + ++ H +VQL SE +V E+M GSL F K+
Sbjct: 41 LKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSE-EPIYIVTEYMNKGSLLD--FLKDG 97
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
G++ L ++A+ A G+ Y+ + +H D++ NIL+ + + ++DFGLA+
Sbjct: 98 EGRALKLPNLVDMAAQVAAGMAYIER---MNYIHRDLRSANILVGNGLICKIADFGLARL 154
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM-TGGR 173
++N+ + + I + APE + +G + KSDV+ FG++L E+ T GR
Sbjct: 155 I-EDNEXTARQGAKFPIKWTAPE--AALYGRFTIKSDVWSFGILLTELVTKGR 204
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 95/195 (48%), Gaps = 15/195 (7%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ S + F+ E + + + H +V+L ++ ++ EFM GSL F K
Sbjct: 44 LKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLD--FLKSD 101
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
G KL + ++ A G+ Y+ +H D++ N+L+ + + ++DFGLA+
Sbjct: 102 EGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARV 158
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTG-------GRR 174
++N++ + + I + APE I NFG + KS+V+ FG++L E+ GR
Sbjct: 159 I-EDNEYTAREGAKFPIKWTAPEAI--NFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRT 215
Query: 175 NSNLKATRSSKAYFP 189
N+++ + S P
Sbjct: 216 NADVMSALSQGYRMP 230
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 92/173 (53%), Gaps = 10/173 (5%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ S + F+ E + + ++ H +V+L ++ ++ E+M NGSL F K
Sbjct: 51 LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTP 107
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
G + KL ++A+ A G+ ++ + +H D++ NIL+ ++DFGLA+
Sbjct: 108 SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARL 164
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM-TGGR 173
++N+ + + I + APE I N+GT + KSDV+ FG++L E+ T GR
Sbjct: 165 I-EDNEXTAREGAKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 92/173 (53%), Gaps = 10/173 (5%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ S + F+ E + + ++ H +V+L ++ ++ E+M NGSL F K
Sbjct: 46 LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTP 102
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
G + KL ++A+ A G+ ++ + +H D++ NIL+ ++DFGLA+
Sbjct: 103 SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARL 159
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM-TGGR 173
++N+ + + I + APE I N+GT + KSDV+ FG++L E+ T GR
Sbjct: 160 I-EDNEXTAREGAKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGR 209
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 92/173 (53%), Gaps = 10/173 (5%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ S + F+ E + + ++ H +V+L ++ ++ E+M NGSL F K
Sbjct: 47 LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTP 103
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
G + KL ++A+ A G+ ++ + +H D++ NIL+ ++DFGLA+
Sbjct: 104 SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARL 160
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM-TGGR 173
++N+ + + I + APE I N+GT + KSDV+ FG++L E+ T GR
Sbjct: 161 I-EDNEXTAREGAKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGR 210
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 92/173 (53%), Gaps = 10/173 (5%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ S + F+ E + + ++ H +V+L ++ ++ E+M NGSL F K
Sbjct: 45 LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTP 101
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
G + KL ++A+ A G+ ++ + +H D++ NIL+ ++DFGLA+
Sbjct: 102 SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARL 158
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM-TGGR 173
++N+ + + I + APE I N+GT + KSDV+ FG++L E+ T GR
Sbjct: 159 I-EDNEXTAREGAKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 92/173 (53%), Gaps = 10/173 (5%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ S + F+ E + + ++ H +V+L ++ ++ E+M NGSL F K
Sbjct: 54 LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTP 110
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
G + KL ++A+ A G+ ++ + +H D++ NIL+ ++DFGLA+
Sbjct: 111 SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARL 167
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM-TGGR 173
++N+ + + I + APE I N+GT + KSDV+ FG++L E+ T GR
Sbjct: 168 I-EDNEXTAREGAKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGR 217
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 92/173 (53%), Gaps = 10/173 (5%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ S + F+ E + + ++ H +V+L ++ ++ E+M NGSL F K
Sbjct: 53 LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTP 109
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
G + KL ++A+ A G+ ++ + +H D++ NIL+ ++DFGLA+
Sbjct: 110 SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARL 166
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM-TGGR 173
++N+ + + I + APE I N+GT + KSDV+ FG++L E+ T GR
Sbjct: 167 I-EDNEXTAREGAKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGR 216
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 89/168 (52%), Gaps = 10/168 (5%)
Query: 7 FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSC 66
S E F+ E + + + H +V+L ++ ++ EFM GSL F K G
Sbjct: 52 MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLD--FLKSDEGSKQ 108
Query: 67 SWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKEN 126
KL + ++ A G+ ++ +H D++ NIL+ + V ++DFGLA+ ++N
Sbjct: 109 PLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVI-EDN 164
Query: 127 DFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM-TGGR 173
++ + + I + APE I NFG+ + KSDV+ FG++L+E+ T GR
Sbjct: 165 EYTAREGAKFPIKWTAPEAI--NFGSFTIKSDVWSFGILLMEIVTYGR 210
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 92/173 (53%), Gaps = 10/173 (5%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ S + F+ E + + ++ H +V+L ++ ++ E+M NGSL F K
Sbjct: 45 LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTP 101
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
G + KL ++A+ A G+ ++ + +H D++ NIL+ ++DFGLA+
Sbjct: 102 SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARL 158
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM-TGGR 173
++N+ + + I + APE I N+GT + KSDV+ FG++L E+ T GR
Sbjct: 159 I-EDNEXTAREGAKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 87/169 (51%), Gaps = 9/169 (5%)
Query: 1 MLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKE 60
M++ S +EFI E + + H +VQL G C++ ++ E+M NG L ++
Sbjct: 55 MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR 114
Query: 61 SRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK 120
R Q+ ++L E+ +EYL + LH D+ N L++ V VSDFGL++
Sbjct: 115 HRFQT---QQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSR 168
Query: 121 FHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ + + S+ ++ + + PE++ + S KSD++ FG+++ E+
Sbjct: 169 YVLDDEETSSV-GSKFPVRWSPPEVLM--YSKFSSKSDIWAFGVLMWEI 214
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ S + F+ E + + ++ H +V+L ++ ++ E+M NGSL F K
Sbjct: 41 LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTP 97
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
G + KL ++A+ A G+ ++ + +H +++ NIL+ ++DFGLA+
Sbjct: 98 SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRNLRAANILVSDTLSCKIADFGLARL 154
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM-TGGR 173
++N++ + + I + APE I N+GT + KSDV+ FG++L E+ T GR
Sbjct: 155 I-EDNEYTAREGAKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGR 204
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 108/237 (45%), Gaps = 21/237 (8%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ EEF+ E + + I H N+VQLLG C+ ++ EFM G+L ++ +E
Sbjct: 292 LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--REC 349
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
Q + L +A+ + +EYL +H ++ N L+ N + V+DFGL++
Sbjct: 350 NRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRL 406
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKAT 181
+ + + + + I + APE ++ N S KSDV+ FG++L E+ AT
Sbjct: 407 MTGDT-YTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEI----------AT 453
Query: 182 RSSKAYFPSWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVKPADRPSMTK 238
Y P Q+ + LE E K+ + C Q P+DRPS +
Sbjct: 454 YGMSPY-PGIDLSQVYE--LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAE 507
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 108/237 (45%), Gaps = 21/237 (8%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ EEF+ E + + I H N+VQLLG C+ ++ EFM G+L ++ +E
Sbjct: 250 LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--REC 307
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
Q + L +A+ + +EYL +H ++ N L+ N + V+DFGL++
Sbjct: 308 NRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRL 364
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKAT 181
+ + + + + I + APE ++ N S KSDV+ FG++L E+ AT
Sbjct: 365 MTGDT-YTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEI----------AT 411
Query: 182 RSSKAYFPSWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVKPADRPSMTK 238
Y P Q+ + LE E K+ + C Q P+DRPS +
Sbjct: 412 YGMSPY-PGIDLSQVYE--LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAE 465
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 89/168 (52%), Gaps = 10/168 (5%)
Query: 7 FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSC 66
S E F+ E + + + H +V+L ++ ++ EFM GSL F K G
Sbjct: 225 MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSL--LDFLKSDEGSKQ 281
Query: 67 SWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKEN 126
KL + ++ A G+ ++ +H D++ NIL+ + V ++DFGLA+ ++N
Sbjct: 282 PLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVI-EDN 337
Query: 127 DFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM-TGGR 173
++ + + I + APE I NFG+ + KSDV+ FG++L+E+ T GR
Sbjct: 338 EYTAREGAKFPIKWTAPEAI--NFGSFTIKSDVWSFGILLMEIVTYGR 383
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 91/173 (52%), Gaps = 10/173 (5%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L+ S + F+ E + + ++ H +V+L ++ ++ E+M NGSL F K
Sbjct: 45 LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTP 101
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
G + KL ++A+ A G+ ++ + +H D++ NIL+ ++DFGLA+
Sbjct: 102 SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARL 158
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM-TGGR 173
++ + + + I + APE I N+GT + KSDV+ FG++L E+ T GR
Sbjct: 159 I-EDAEXTAREGAKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E E+ ++H NVV+ G EG+ + L E+ G L I P + +
Sbjct: 49 ENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
H++ +G YLH + I H DIKP N+LLD +SDFGLA N
Sbjct: 109 FFHQLMAGVV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
++ GT+ Y+APEL+ R DV+ G+VL M G
Sbjct: 162 LLNKMXGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E E+ ++H NVV+ G EG+ + L E+ G L I P + +
Sbjct: 50 ENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
H++ +G YLH + I H DIKP N+LLD +SDFGLA N
Sbjct: 110 FFHQLMAGVV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
++ GT+ Y+APEL+ R DV+ G+VL M G
Sbjct: 163 LLNKMXGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAMLAG 204
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E E+ ++H NVV+ G EG+ + L E+ G L I P + +
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
H++ +G YLH + I H DIKP N+LLD +SDFGLA N
Sbjct: 109 FFHQLMAGVV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
++ GT+ Y+APEL+ R DV+ G+VL M G
Sbjct: 162 LLNKMXGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E E+ ++H NVV+ G EG+ + L E+ G L I P + +
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
H++ +G YLH + I H DIKP N+LLD +SDFGLA N
Sbjct: 109 FFHQLMAGVV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
++ GT+ Y+APEL+ R DV+ G+VL M G
Sbjct: 162 LLNKMXGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E E+ ++H NVV+ G EG+ + L E+ G L I P + +
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
H++ +G YLH + I H DIKP N+LLD +SDFGLA N
Sbjct: 109 FFHQLMAGVV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
++ GT+ Y+APEL+ R DV+ G+VL M G
Sbjct: 162 LLNKMXGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E E+ ++H NVV+ G EG+ + L E+ G L I P + +
Sbjct: 50 ENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
H++ +G YLH + I H DIKP N+LLD +SDFGLA N
Sbjct: 110 FFHQLMAGVV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
++ GT+ Y+APEL+ R DV+ G+VL M G
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAMLAG 204
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 11/162 (6%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKESRGQSCSW 68
+F E+ + + H N+V+ G C +R L+ E++P GSL ++ + R
Sbjct: 57 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-- 114
Query: 69 EKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDF 128
KL + S G+EYL G I H D+ NIL+++ + DFGL K P++ +F
Sbjct: 115 -KLLQYTSQICKGMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEF 170
Query: 129 VSISAT-RGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ I + APE ++ + S SDV+ FG+VL E+
Sbjct: 171 FKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYEL 210
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E E+ ++H NVV+ G EG+ + L E+ G L I P + +
Sbjct: 49 ENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
H++ +G YLH + I H DIKP N+LLD +SDFGLA N
Sbjct: 109 FFHQLMAGVV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
++ GT+ Y+APEL+ R DV+ G+VL M G
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E E+ ++H NVV+ G EG+ + L E+ G L I P + +
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
H++ +G YLH + I H DIKP N+LLD +SDFGLA N
Sbjct: 109 FFHQLMAGVV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
++ GT+ Y+APEL+ R DV+ G+VL M G
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E E+ ++H NVV+ G EG+ + L E+ G L I P + +
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
H++ +G YLH + I H DIKP N+LLD +SDFGLA N
Sbjct: 109 FFHQLMAGVV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
++ GT+ Y+APEL+ R DV+ G+VL M G
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E E+ ++H NVV+ G EG+ + L E+ G L I P + +
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
H++ +G YLH + I H DIKP N+LLD +SDFGLA N
Sbjct: 109 FFHQLMAGVV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
++ GT+ Y+APEL+ R DV+ G+VL M G
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E E+ ++H NVV+ G EG+ + L E+ G L I P + +
Sbjct: 50 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
H++ +G YLH + I H DIKP N+LLD +SDFGLA N
Sbjct: 110 FFHQLMAGVV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
++ GT+ Y+APEL+ R DV+ G+VL M G
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAMLAG 204
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E E+ ++H NVV+ G EG+ + L E+ G L I P + +
Sbjct: 50 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
H++ +G YLH + I H DIKP N+LLD +SDFGLA N
Sbjct: 110 FFHQLMAGVV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
++ GT+ Y+APEL+ R DV+ G+VL M G
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E E+ ++H NVV+ G EG+ + L E+ G L I P + +
Sbjct: 50 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
H++ +G YLH + I H DIKP N+LLD +SDFGLA N
Sbjct: 110 FFHQLMAGVV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
++ GT+ Y+APEL+ R DV+ G+VL M G
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAMLAG 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E E+ ++H NVV+ G EG+ + L E+ G L I P + +
Sbjct: 50 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
H++ +G YLH + I H DIKP N+LLD +SDFGLA N
Sbjct: 110 FFHQLMAGVV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
++ GT+ Y+APEL+ R DV+ G+VL M G
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAMLAG 204
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E E+ ++H NVV+ G EG+ + L E+ G L I P + +
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
H++ +G YLH + I H DIKP N+LLD +SDFGLA N
Sbjct: 109 FFHQLMAGVV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
++ GT+ Y+APEL+ R DV+ G+VL M G
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E E+ ++H NVV+ G EG+ + L E+ G L I P + +
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
H++ +G YLH + I H DIKP N+LLD +SDFGLA N
Sbjct: 109 FFHQLMAGVV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
++ GT+ Y+APEL+ R DV+ G+VL M G
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E E+ ++H NVV+ G EG+ + L E+ G L I P + +
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
H++ +G YLH + I H DIKP N+LLD +SDFGLA N
Sbjct: 109 FFHQLMAGVV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
++ GT+ Y+APEL+ R DV+ G+VL M G
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E E+ ++H NVV+ G EG+ + L E+ G L I P + +
Sbjct: 50 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
H++ +G YLH + I H DIKP N+LLD +SDFGLA N
Sbjct: 110 FFHQLMAGVV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
++ GT+ Y+APEL+ R DV+ G+VL M G
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAMLAG 204
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E E+ ++H NVV+ G EG+ + L E+ G L I P + +
Sbjct: 48 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 107
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
H++ +G YLH + I H DIKP N+LLD +SDFGLA N
Sbjct: 108 FFHQLMAGVV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 160
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
++ GT+ Y+APEL+ R DV+ G+VL M G
Sbjct: 161 LLNKMCGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAMLAG 202
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E E+ ++H NVV+ G EG+ + L E+ G L I P + +
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
H++ +G YLH + I H DIKP N+LLD +SDFGLA N
Sbjct: 109 FFHQLMAGVV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
++ GT+ Y+APEL+ R DV+ G+VL M G
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E E+ ++H NVV+ G EG+ + L E+ G L I P + +
Sbjct: 50 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
H++ +G YLH + I H DIKP N+LLD +SDFGLA N
Sbjct: 110 FFHQLMAGVV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
++ GT+ Y+APEL+ R DV+ G+VL M G
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAMLAG 204
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 3 ENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESR 62
++ + S + + + IG + H ++V+LLG C GS LV +++P GSL H+ ++ R
Sbjct: 53 KSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHV--RQHR 109
Query: 63 GQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFH 122
G + + L A G+ YL + ++H ++ N+LL V+DFG+A
Sbjct: 110 G-ALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLL 165
Query: 123 PKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT--GGRRNSNLKA 180
P ++ + S + I ++A E I +FG + +SDV+ +G+ + E+ G + L+
Sbjct: 166 PPDDKQLLYSEAKTPIKWMALESI--HFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL 223
Query: 181 TRSSKAYFPSWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVK 229
V D L KG E + ++C I ++ + VK
Sbjct: 224 AE---------VPDLLEKG-----------ERLAQPQICTIDVYMVMVK 252
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 3 ENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESR 62
++ + S + + + IG + H ++V+LLG C GS LV +++P GSL H+ ++ R
Sbjct: 71 KSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHV--RQHR 127
Query: 63 GQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFH 122
G + + L A G+ YL + ++H ++ N+LL V+DFG+A
Sbjct: 128 G-ALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLL 183
Query: 123 PKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT--GGRRNSNLKA 180
P ++ + S + I ++A E I +FG + +SDV+ +G+ + E+ G + L+
Sbjct: 184 PPDDKQLLYSEAKTPIKWMALESI--HFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL 241
Query: 181 TRSSKAYFPSWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVK 229
V D L KG E + ++C I ++ + VK
Sbjct: 242 AE---------VPDLLEKG-----------ERLAQPQICTIDVYMVMVK 270
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 78/162 (48%), Gaps = 10/162 (6%)
Query: 12 FINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKL 71
F EV ++ H N+V ++ E LV E++ +L +I ES G S +
Sbjct: 58 FEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI---ESHG-PLSVDTA 113
Query: 72 HEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSI 131
+ GI++ H D+ I+H DIKP NIL+D N + DFG+AK E
Sbjct: 114 INFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKA-LSETSLTQT 169
Query: 132 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ GT+ Y +PE ++ T C +D+Y G+VL EM G
Sbjct: 170 NHVLGTVQYFSPEQ-AKGEATDEC-TDIYSIGIVLYEMLVGE 209
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 111/251 (44%), Gaps = 42/251 (16%)
Query: 5 SKFSAEEFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEFMPNGSL----------- 52
SK +F E+ + ++ HH N++ LLG C L E+ P+G+L
Sbjct: 65 SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLE 124
Query: 53 -DRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVP 111
D S + S ++L A+ A G++YL +H D+ NIL+ N+V
Sbjct: 125 TDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA 181
Query: 112 NVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT- 170
++DFGL++ + +V + R + ++A E S N+ + SDV+ +G++L E+
Sbjct: 182 KIADFGLSR---GQEVYVKKTMGRLPVRWMAIE--SLNYSVYTTNSDVWSYGVLLWEIVS 236
Query: 171 -GGRRNSNLKATRSSKAYFPSWVSDQLNKGGNLE--LRNVTEIESMIARKLCVIGLWCIQ 227
GG + + ++L +G LE L E+ ++ + C +
Sbjct: 237 LGGTPYCGMTCAE---------LYEKLPQGYRLEKPLNCDDEVYDLMRQ--------CWR 279
Query: 228 VKPADRPSMTK 238
KP +RPS +
Sbjct: 280 EKPYERPSFAQ 290
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 111/251 (44%), Gaps = 42/251 (16%)
Query: 5 SKFSAEEFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEFMPNGSL----------- 52
SK +F E+ + ++ HH N++ LLG C L E+ P+G+L
Sbjct: 55 SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLE 114
Query: 53 -DRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVP 111
D S + S ++L A+ A G++YL +H D+ NIL+ N+V
Sbjct: 115 TDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA 171
Query: 112 NVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT- 170
++DFGL++ + +V + R + ++A E S N+ + SDV+ +G++L E+
Sbjct: 172 KIADFGLSR---GQEVYVKKTMGRLPVRWMAIE--SLNYSVYTTNSDVWSYGVLLWEIVS 226
Query: 171 -GGRRNSNLKATRSSKAYFPSWVSDQLNKGGNLE--LRNVTEIESMIARKLCVIGLWCIQ 227
GG + + ++L +G LE L E+ ++ + C +
Sbjct: 227 LGGTPYCGMTCAE---------LYEKLPQGYRLEKPLNCDDEVYDLMRQ--------CWR 269
Query: 228 VKPADRPSMTK 238
KP +RPS +
Sbjct: 270 EKPYERPSFAQ 280
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 27/200 (13%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
EE NE+S + + H N+++L + LV EF G L I + + +
Sbjct: 91 EEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAAN 150
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDH-NFVPNVS--DFGLAKFHPKEN 126
+ ++ S GI YLH I+H DIKP NILL++ N + N+ DFGL+ F K+
Sbjct: 151 IMKQILS----GICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD- 202
Query: 127 DFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT------GGRRNSN-LK 179
+ GT YIAPE++ + + K DV+ G+++ + GG+ + + +K
Sbjct: 203 --YKLRDRLGTAYYIAPEVLKKKYNE---KCDVWSCGVIMYILLCGYPPFGGQNDQDIIK 257
Query: 180 ATRSSKAYFP--SW--VSDQ 195
K YF W +SD+
Sbjct: 258 KVEKGKYYFDFNDWKNISDE 277
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKESRGQSCSW 68
+F E+ + + H N+V+ G C +R L+ EF+P GSL ++ + R
Sbjct: 60 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHI-- 117
Query: 69 EKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDF 128
KL + S G+EYL G I H D+ NIL+++ + DFGL K P++ +
Sbjct: 118 -KLLQYTSQICKGMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 173
Query: 129 VSISAT-RGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ I + APE ++ + S SDV+ FG+VL E+
Sbjct: 174 XKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYEL 213
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 77/158 (48%), Gaps = 8/158 (5%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
+F+ E + + H N+V+L+G C++ +V E + G + + G +
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL---RTEGARLRVKT 214
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS 130
L ++ A G+EYL + C CI H D+ N L+ V +SDFG+++ S
Sbjct: 215 LLQMVGDAAAGMEYLESKC--CI-HRDLAARNCLVTEKNVLKISDFGMSREEADGVXAAS 271
Query: 131 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLE 168
+ + + APE + N+G S +SDV+ FG++L E
Sbjct: 272 GGLRQVPVKWTAPEAL--NYGRYSSESDVWSFGILLWE 307
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 14/161 (8%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
+F+ E + + H N+V+L+G C++ +V E + G + + G +
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL---RTEGARLRVKT 214
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS 130
L ++ A G+EYL + C CI H D+ N L+ V +SDFG+++ +E D V
Sbjct: 215 LLQMVGDAAAGMEYLESKC--CI-HRDLAARNCLVTEKNVLKISDFGMSR---EEADGVY 268
Query: 131 ISA---TRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLE 168
++ + + + APE + N+G S +SDV+ FG++L E
Sbjct: 269 AASGGLRQVPVKWTAPEAL--NYGRYSSESDVWSFGILLWE 307
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 11/162 (6%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKESRGQSCSW 68
+F E+ + + H N+V+ G C +R L+ E++P GSL ++ ++ +
Sbjct: 60 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QAHAERIDH 116
Query: 69 EKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDF 128
KL + S G+EYL G I H D+ NIL+++ + DFGL K P++ +
Sbjct: 117 IKLLQYTSQICKGMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 173
Query: 129 VSISAT-RGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ I + APE ++ + S SDV+ FG+VL E+
Sbjct: 174 XKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYEL 213
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 7 FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSC 66
S E F+ E + + + H +V+L ++ ++ EFM GSL F K G
Sbjct: 219 MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSL--LDFLKSDEGSKQ 275
Query: 67 SWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKEN 126
KL + ++ A G+ ++ +H D++ NIL+ + V ++DFGLA+
Sbjct: 276 PLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARV----- 327
Query: 127 DFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM-TGGR 173
+ I + APE I NFG+ + KSDV+ FG++L+E+ T GR
Sbjct: 328 ------GAKFPIKWTAPEAI--NFGSFTIKSDVWSFGILLMEIVTYGR 367
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKESRGQSCSW 68
+F E+ + + H N+V+ G C +R L+ E++P GSL ++ + R
Sbjct: 62 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-- 119
Query: 69 EKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDF 128
KL + S G+EYL G I H D+ NIL+++ + DFGL K P++ +
Sbjct: 120 -KLLQYTSQICKGMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 175
Query: 129 VSISAT-RGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ I + APE ++ + S SDV+ FG+VL E+
Sbjct: 176 XKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYEL 215
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKESRGQSCSW 68
+F E+ + + H N+V+ G C +R L+ E++P GSL ++ + R
Sbjct: 56 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-- 113
Query: 69 EKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDF 128
KL + S G+EYL G I H D+ NIL+++ + DFGL K P++ +
Sbjct: 114 -KLLQYTSQICKGMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 169
Query: 129 VSISAT-RGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ I + APE ++ + S SDV+ FG+VL E+
Sbjct: 170 XKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYEL 209
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKESRGQSCSW 68
+F E+ + + H N+V+ G C +R L+ E++P GSL ++ + R
Sbjct: 88 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-- 145
Query: 69 EKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDF 128
KL + S G+EYL G I H D+ NIL+++ + DFGL K P++ +
Sbjct: 146 -KLLQYTSQICKGMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 201
Query: 129 VSISAT-RGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ I + APE ++ + S SDV+ FG+VL E+
Sbjct: 202 XKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYEL 241
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKESRGQSCSW 68
+F E+ + + H N+V+ G C +R L+ E++P GSL ++ + R
Sbjct: 63 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-- 120
Query: 69 EKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDF 128
KL + S G+EYL G I H D+ NIL+++ + DFGL K P++ +
Sbjct: 121 -KLLQYTSQICKGMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 176
Query: 129 VSISAT-RGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ I + APE ++ + S SDV+ FG+VL E+
Sbjct: 177 XKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYEL 216
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKESRGQSCSW 68
+F E+ + + H N+V+ G C +R L+ E++P GSL ++ + R
Sbjct: 57 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-- 114
Query: 69 EKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDF 128
KL + S G+EYL G I H D+ NIL+++ + DFGL K P++ +
Sbjct: 115 -KLLQYTSQICKGMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 170
Query: 129 VSISAT-RGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ I + APE ++ + S SDV+ FG+VL E+
Sbjct: 171 XKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYEL 210
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 15/164 (9%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLG-FCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSC 66
+A+ F+ E S + ++ H N+VQLLG E +V E+M GSL ++ SRG+S
Sbjct: 48 TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSV 104
Query: 67 -SWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKE 125
+ L + + +EYL +H D+ N+L+ + V VSDFGL K
Sbjct: 105 LGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 161
Query: 126 NDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
D + + + APE + S KSDV+ FG++L E+
Sbjct: 162 QD-----TGKLPVKWTAPEALRE--AAFSTKSDVWSFGILLWEI 198
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKESRGQSCSW 68
+F E+ + + H N+V+ G C +R L+ E++P GSL ++ + R
Sbjct: 55 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-- 112
Query: 69 EKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDF 128
KL + S G+EYL G I H D+ NIL+++ + DFGL K P++ +
Sbjct: 113 -KLLQYTSQICKGMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 168
Query: 129 VSISAT-RGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ I + APE ++ + S SDV+ FG+VL E+
Sbjct: 169 XKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYEL 208
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKESRGQSCSW 68
+F E+ + + H N+V+ G C +R L+ E++P GSL ++ + R
Sbjct: 61 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-- 118
Query: 69 EKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDF 128
KL + S G+EYL G I H D+ NIL+++ + DFGL K P++ +
Sbjct: 119 -KLLQYTSQICKGMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 174
Query: 129 VSISAT-RGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ I + APE ++ + S SDV+ FG+VL E+
Sbjct: 175 XKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYEL 214
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKESRGQSCSW 68
+F E+ + + H N+V+ G C +R L+ E++P GSL ++ + R
Sbjct: 57 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-- 114
Query: 69 EKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDF 128
KL + S G+EYL G I H D+ NIL+++ + DFGL K P++ +
Sbjct: 115 -KLLQYTSQICKGMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 170
Query: 129 VSISAT-RGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ I + APE ++ + S SDV+ FG+VL E+
Sbjct: 171 XKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYEL 210
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 11/162 (6%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKESRGQSCSW 68
+F E+ + + H N+V+ G C +R L+ E++P GSL ++ + R
Sbjct: 58 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-- 115
Query: 69 EKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDF 128
KL + S G+EYL G I H ++ NIL+++ + DFGL K P++ ++
Sbjct: 116 -KLLQYTSQICKGMEYL--GTKRYI-HRNLATRNILVENENRVKIGDFGLTKVLPQDKEY 171
Query: 129 VSISAT-RGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ I + APE ++ + S SDV+ FG+VL E+
Sbjct: 172 YKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYEL 211
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKESRGQSCSW 68
+F E+ + + H N+V+ G C +R L+ E++P GSL ++ + R
Sbjct: 60 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-- 117
Query: 69 EKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDF 128
KL + S G+EYL G I H D+ NIL+++ + DFGL K P++ +
Sbjct: 118 -KLLQYTSQICKGMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 173
Query: 129 VSISAT-RGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ I + APE ++ + S SDV+ FG+VL E+
Sbjct: 174 XKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYEL 213
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKESRGQSCSW 68
+F E+ + + H N+V+ G C +R L+ E++P GSL ++ + R
Sbjct: 64 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-- 121
Query: 69 EKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDF 128
KL + S G+EYL G I H D+ NIL+++ + DFGL K P++ +
Sbjct: 122 -KLLQYTSQICKGMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 177
Query: 129 VSISAT-RGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ I + APE ++ + S SDV+ FG+VL E+
Sbjct: 178 XKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYEL 217
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 15/164 (9%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLG-FCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSC 66
+A+ F+ E S + ++ H N+VQLLG E +V E+M GSL ++ SRG+S
Sbjct: 42 TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSV 98
Query: 67 -SWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKE 125
+ L + + +EYL +H D+ N+L+ + V VSDFGL K
Sbjct: 99 LGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 155
Query: 126 NDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
D + + + APE + S KSDV+ FG++L E+
Sbjct: 156 QD-----TGKLPVKWTAPEALREK--KFSTKSDVWSFGILLWEI 192
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKESRGQSCSW 68
+F E+ + + H N+V+ G C +R L+ E++P GSL ++ + R
Sbjct: 75 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-- 132
Query: 69 EKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDF 128
KL + S G+EYL G I H D+ NIL+++ + DFGL K P++ +
Sbjct: 133 -KLLQYTSQICKGMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 188
Query: 129 VSISAT-RGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ I + APE ++ + S SDV+ FG+VL E+
Sbjct: 189 XKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYEL 228
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 15/164 (9%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLG-FCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSC 66
+A+ F+ E S + ++ H N+VQLLG E +V E+M GSL ++ SRG+S
Sbjct: 57 TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSV 113
Query: 67 -SWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKE 125
+ L + + +EYL +H D+ N+L+ + V VSDFGL K
Sbjct: 114 LGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 170
Query: 126 NDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
D + + + APE + S KSDV+ FG++L E+
Sbjct: 171 QD-----TGKLPVKWTAPEALREK--KFSTKSDVWSFGILLWEI 207
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKESRGQSCSW 68
+F E+ + + H N+V+ G C +R L+ E++P GSL ++ + R
Sbjct: 75 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-- 132
Query: 69 EKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDF 128
KL + S G+EYL G I H D+ NIL+++ + DFGL K P++ +
Sbjct: 133 -KLLQYTSQICKGMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 188
Query: 129 VSISAT-RGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ I + APE ++ + S SDV+ FG+VL E+
Sbjct: 189 XKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYEL 228
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 106/253 (41%), Gaps = 35/253 (13%)
Query: 1 MLENSKFSAEE---FINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIF 57
M E +F E F+ EV + + H NV++ +G + + + E++ G+L I
Sbjct: 40 MKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGII- 98
Query: 58 PKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG 117
+S W + A A G+ YLH+ + I+H D+ HN L+ N V+DFG
Sbjct: 99 --KSMDSQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFG 153
Query: 118 LAKF------HP------KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMV 165
LA+ P K+ D G ++APE+I N + K DV+ FG+V
Sbjct: 154 LARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMI--NGRSYDEKVDVFSFGIV 211
Query: 166 LLEMTGGRRNSNLKATRSSKAYFPSWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWC 225
L E+ GR N++ Y P + LN G L+ I + C
Sbjct: 212 LCEII-GRVNAD-------PDYLPRTMDFGLNVRGFLD----RYCPPNCPPSFFPITVRC 259
Query: 226 IQVKPADRPSMTK 238
+ P RPS K
Sbjct: 260 CDLDPEKRPSFVK 272
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 77/160 (48%), Gaps = 11/160 (6%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
E + R+ H V+L + K + NG L ++I S ++C+ E
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 138
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISA 133
+ S +EYLH I+H D+KP NILL+ + ++DFG AK E+ +A
Sbjct: 139 IVSA----LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANA 191
Query: 134 TRGTIGYIAPELISRNFGTVSCK-SDVYGFGMVLLEMTGG 172
GT Y++PEL++ +CK SD++ G ++ ++ G
Sbjct: 192 FVGTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAG 228
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 111/251 (44%), Gaps = 42/251 (16%)
Query: 5 SKFSAEEFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEFMPNGSL----------- 52
SK +F E+ + ++ HH N++ LLG C L E+ P+G+L
Sbjct: 62 SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLE 121
Query: 53 -DRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVP 111
D S + S ++L A+ A G++YL +H ++ NIL+ N+V
Sbjct: 122 TDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRNLAARNILVGENYVA 178
Query: 112 NVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT- 170
++DFGL++ + +V + R + ++A E S N+ + SDV+ +G++L E+
Sbjct: 179 KIADFGLSR---GQEVYVKKTMGRLPVRWMAIE--SLNYSVYTTNSDVWSYGVLLWEIVS 233
Query: 171 -GGRRNSNLKATRSSKAYFPSWVSDQLNKGGNLE--LRNVTEIESMIARKLCVIGLWCIQ 227
GG + + ++L +G LE L E+ ++ + C +
Sbjct: 234 LGGTPYCGMTCAE---------LYEKLPQGYRLEKPLNCDDEVYDLMRQ--------CWR 276
Query: 228 VKPADRPSMTK 238
KP +RPS +
Sbjct: 277 EKPYERPSFAQ 287
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 15/164 (9%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLG-FCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSC 66
+A+ F+ E S + ++ H N+VQLLG E +V E+M GSL ++ SRG+S
Sbjct: 229 TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSV 285
Query: 67 -SWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKE 125
+ L + + +EYL +H D+ N+L+ + V VSDFGL K
Sbjct: 286 LGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 342
Query: 126 NDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
D + + + APE + S KSDV+ FG++L E+
Sbjct: 343 QDTGKLP-----VKWTAPEALREK--KFSTKSDVWSFGILLWEI 379
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 81/178 (45%), Gaps = 19/178 (10%)
Query: 3 ENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESR 62
E+ + E E + H N++ L G C + LV EF G L+R +
Sbjct: 44 EDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL-----S 98
Query: 63 GQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDH--------NFVPNVS 114
G+ + L A A G+ YLH+ V I+H D+K NIL+ N + ++
Sbjct: 99 GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKIT 158
Query: 115 DFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
DFGLA +E + + G ++APE+I + S SDV+ +G++L E+ G
Sbjct: 159 DFGLA----REWHRTTKMSAAGAYAWMAPEVIRASM--FSKGSDVWSYGVLLWELLTG 210
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 23 HHVNVVQLLGFCSE-GSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHG 81
HH+NVV LLG C++ G ++ EF G+L ++ + R + ++ L++ H
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKDLYKDFLTLEHL 146
Query: 82 IEY---LHNGCDVC----ILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISAT 134
I Y + G + +H D+ NILL V + DFGLA+ K+ D+V
Sbjct: 147 IXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDA 206
Query: 135 RGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
R + ++APE I T+ +SDV+ FG++L E+
Sbjct: 207 RLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 239
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 18/158 (11%)
Query: 23 HHVNVVQLLGFCSE-GSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE-------- 73
HH+NVV LLG C++ G ++ EF G+L ++ + R + ++ L++
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKDLYKDFLTLEHL 146
Query: 74 --VASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSI 131
+ A G+E+L + + H D+ NILL V + DFGLA+ K+ D+V
Sbjct: 147 ICYSFQVAKGMEFLASRKXI---HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 203
Query: 132 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
R + ++APE I T+ +SDV+ FG++L E+
Sbjct: 204 GDARLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 239
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 16/169 (9%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
S E+ EVS + I H NV+ L + L+ E + G L + KES + +
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVP----NVSDFGLAKFHP 123
E L ++ +G+ YLH+ + I H D+KP NI+L VP + DFGLA
Sbjct: 117 TEFLKQI----LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
N+F +I GT ++APE++ N+ + ++D++ G++ + G
Sbjct: 170 FGNEFKNIF---GTPAFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 18/160 (11%)
Query: 23 HHVNVVQLLGFCSE-GSKRALVYEFMPNGSLDRH------------IFPKESRGQSCSWE 69
HH+NVV LLG C++ G ++ EF G+L + + P++ + E
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
L + A G+E+L CI H D+ NILL V + DFGLA+ K+ D+V
Sbjct: 140 HLICYSFQVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 196
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
R + ++APE I T+ +SDV+ FG++L E+
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 234
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 18/160 (11%)
Query: 23 HHVNVVQLLGFCSE-GSKRALVYEFMPNGSLDRH------------IFPKESRGQSCSWE 69
HH+NVV LLG C++ G ++ EF G+L + + P++ + E
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
L + A G+E+L CI H D+ NILL V + DFGLA+ K+ D+V
Sbjct: 140 HLICYSFQVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 196
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
R + ++APE I T+ +SDV+ FG++L E+
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 234
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 18/160 (11%)
Query: 23 HHVNVVQLLGFCSE-GSKRALVYEFMPNGSLDRH------------IFPKESRGQSCSWE 69
HH+NVV LLG C++ G ++ EF G+L + + P++ + E
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
L + A G+E+L CI H D+ NILL V + DFGLA+ K+ D+V
Sbjct: 149 HLICYSFQVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 205
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
R + ++APE I T+ +SDV+ FG++L E+
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 243
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 18/160 (11%)
Query: 23 HHVNVVQLLGFCSE-GSKRALVYEFMPNGSLDRH------------IFPKESRGQSCSWE 69
HH+NVV LLG C++ G ++ EF G+L + + P++ + E
Sbjct: 126 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 185
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
L + A G+E+L CI H D+ NILL V + DFGLA+ K+ D+V
Sbjct: 186 HLICYSFQVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 242
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
R + ++APE I T+ +SDV+ FG++L E+
Sbjct: 243 RKGDARLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 280
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 83/174 (47%), Gaps = 27/174 (15%)
Query: 15 EVSTIGRIHHVNVVQLLGFCSEGS----KRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
EV ++ + H N++Q +G G+ L+ F GSL + + SW +
Sbjct: 68 EVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL-----KANVVSWNE 122
Query: 71 LHEVASGTAHGIEYLH-------NGCDVCILHLDIKPHNILLDHNFVPNVSDFGLA-KFH 122
L +A A G+ YLH +G I H DIK N+LL +N ++DFGLA KF
Sbjct: 123 LCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFE 182
Query: 123 PKENDFVSISATRGTIG---YIAPELI--SRNFGTVS-CKSDVYGFGMVLLEMT 170
+ S T G +G Y+APE++ + NF + + D+Y G+VL E+
Sbjct: 183 AGK----SAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELA 232
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 11/160 (6%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
E + R+ H V+L + K + NG L ++I S ++C+ E
Sbjct: 78 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 137
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISA 133
+ S +EYLH I+H D+KP NILL+ + ++DFG AK E+ ++
Sbjct: 138 IVSA----LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS 190
Query: 134 TRGTIGYIAPELISRNFGTVSCK-SDVYGFGMVLLEMTGG 172
GT Y++PEL++ +CK SD++ G ++ ++ G
Sbjct: 191 FVGTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAG 227
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 18/160 (11%)
Query: 23 HHVNVVQLLGFCSE-GSKRALVYEFMPNGSLDRHI------------FPKESRGQSCSWE 69
HH+NVV LLG C++ G ++ EF G+L ++ P++ + E
Sbjct: 91 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLE 150
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
L + A G+E+L CI H D+ NILL V + DFGLA+ K+ D+V
Sbjct: 151 HLICYSFQVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 207
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
R + ++APE I T+ +SDV+ FG++L E+
Sbjct: 208 RKGDARLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 245
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
E + R+ H V+L + K + NG L ++I S ++C+ E
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAE 140
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISA 133
+ S +EYLH I+H D+KP NILL+ + ++DFG AK E+ ++
Sbjct: 141 IVSA----LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS 193
Query: 134 TRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT Y++PEL++ + S SD++ G ++ ++ G
Sbjct: 194 FVGTAQYVSPELLTEK--SASKSSDLWALGCIIYQLVAG 230
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 11/160 (6%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
E + R+ H V+L + K + NG L ++I S ++C+ E
Sbjct: 82 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 141
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISA 133
+ S +EYLH I+H D+KP NILL+ + ++DFG AK E+ ++
Sbjct: 142 IVSA----LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS 194
Query: 134 TRGTIGYIAPELISRNFGTVSCK-SDVYGFGMVLLEMTGG 172
GT Y++PEL++ +CK SD++ G ++ ++ G
Sbjct: 195 FVGTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAG 231
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 16/168 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+EF EV + ++H N+V+L G + +V EF+P G L + + W
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLL---DKAHPIKWS 122
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILL---DHN--FVPNVSDFGLAKFHPK 124
+ A GIEY+ N + I+H D++ NI L D N V+DFGL+
Sbjct: 123 VKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS----- 176
Query: 125 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
+ S+S G ++APE I + + K+D Y F M+L + G
Sbjct: 177 QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 11/160 (6%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
E + R+ H V+L + K + NG L ++I S ++C+ E
Sbjct: 56 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 115
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISA 133
+ S +EYLH I+H D+KP NILL+ + ++DFG AK E+ +
Sbjct: 116 IVSA----LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 168
Query: 134 TRGTIGYIAPELISRNFGTVSCK-SDVYGFGMVLLEMTGG 172
GT Y++PEL++ +CK SD++ G ++ ++ G
Sbjct: 169 FVGTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAG 205
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 16/169 (9%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
S E+ EVS + I H NV+ L + L+ E + G L + KES + +
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVP----NVSDFGLAKFHP 123
E L ++ +G+ YLH+ + I H D+KP NI+L VP + DFGLA
Sbjct: 117 TEFLKQI----LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
N+F +I GT ++APE++ N+ + ++D++ G++ + G
Sbjct: 170 FGNEFKNIF---GTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 11/160 (6%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
E + R+ H V+L + K + NG L ++I S ++C+ E
Sbjct: 57 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 116
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISA 133
+ S +EYLH I+H D+KP NILL+ + ++DFG AK E+ +
Sbjct: 117 IVSA----LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 169
Query: 134 TRGTIGYIAPELISRNFGTVSCK-SDVYGFGMVLLEMTGG 172
GT Y++PEL++ +CK SD++ G ++ ++ G
Sbjct: 170 FVGTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAG 206
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 21/169 (12%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSL-DRHIFPKESRGQSCSW 68
EE NE+S + ++ H N++QL + LV E++ G L DR I +S +
Sbjct: 131 EEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRII------DESYNL 184
Query: 69 EKLHEV--ASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVS--DFGLA-KFHP 123
+L + GI ++H + ILHLD+KP NIL + + DFGLA ++ P
Sbjct: 185 TELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKP 241
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
+E + GT ++APE+++ +F VS +D++ G++ + G
Sbjct: 242 RE----KLKVNFGTPEFLAPEVVNYDF--VSFPTDMWSVGVIAYMLLSG 284
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 11/160 (6%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
E + R+ H V+L + K + NG L ++I S ++C+ E
Sbjct: 63 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 122
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISA 133
+ S +EYLH I+H D+KP NILL+ + ++DFG AK E+ +
Sbjct: 123 IVSA----LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 175
Query: 134 TRGTIGYIAPELISRNFGTVSCK-SDVYGFGMVLLEMTGG 172
GT Y++PEL++ +CK SD++ G ++ ++ G
Sbjct: 176 FVGTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAG 212
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 11/160 (6%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
E + R+ H V+L + K + NG L ++I S ++C+ E
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 138
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISA 133
+ S +EYLH I+H D+KP NILL+ + ++DFG AK E+ +
Sbjct: 139 IVSA----LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 191
Query: 134 TRGTIGYIAPELISRNFGTVSCK-SDVYGFGMVLLEMTGG 172
GT Y++PEL++ +CK SD++ G ++ ++ G
Sbjct: 192 FVGTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAG 228
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 11/160 (6%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
E + R+ H V+L + K + NG L ++I S ++C+ E
Sbjct: 58 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 117
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISA 133
+ S +EYLH I+H D+KP NILL+ + ++DFG AK E+ +
Sbjct: 118 IVSA----LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 170
Query: 134 TRGTIGYIAPELISRNFGTVSCK-SDVYGFGMVLLEMTGG 172
GT Y++PEL++ +CK SD++ G ++ ++ G
Sbjct: 171 FVGTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAG 207
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 11/160 (6%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
E + R+ H V+L + K + NG L ++I S ++C+ E
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 140
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISA 133
+ S +EYLH I+H D+KP NILL+ + ++DFG AK E+ +
Sbjct: 141 IVSA----LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 193
Query: 134 TRGTIGYIAPELISRNFGTVSCK-SDVYGFGMVLLEMTGG 172
GT Y++PEL++ +CK SD++ G ++ ++ G
Sbjct: 194 FVGTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAG 230
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 11/160 (6%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
E + R+ H V+L + K + NG L ++I S ++C+ E
Sbjct: 78 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 137
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISA 133
+ S +EYLH I+H D+KP NILL+ + ++DFG AK E+ +
Sbjct: 138 IVSA----LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 190
Query: 134 TRGTIGYIAPELISRNFGTVSCK-SDVYGFGMVLLEMTGG 172
GT Y++PEL++ +CK SD++ G ++ ++ G
Sbjct: 191 FVGTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAG 227
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 11/160 (6%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
E + R+ H V+L + K + NG L ++I S ++C+ E
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 138
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISA 133
+ S +EYLH I+H D+KP NILL+ + ++DFG AK E+ +
Sbjct: 139 IVSA----LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 191
Query: 134 TRGTIGYIAPELISRNFGTVSCK-SDVYGFGMVLLEMTGG 172
GT Y++PEL++ +CK SD++ G ++ ++ G
Sbjct: 192 FVGTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAG 228
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 11/160 (6%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
E + R+ H V+L + K + NG L ++I S ++C+ E
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 138
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISA 133
+ S +EYLH I+H D+KP NILL+ + ++DFG AK E+ +
Sbjct: 139 IVSA----LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 191
Query: 134 TRGTIGYIAPELISRNFGTVSCK-SDVYGFGMVLLEMTGG 172
GT Y++PEL++ +CK SD++ G ++ ++ G
Sbjct: 192 FVGTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAG 228
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 11/160 (6%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
E + R+ H V+L + K + NG L ++I S ++C+ E
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 140
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISA 133
+ S +EYLH I+H D+KP NILL+ + ++DFG AK E+ +
Sbjct: 141 IVSA----LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 193
Query: 134 TRGTIGYIAPELISRNFGTVSCK-SDVYGFGMVLLEMTGG 172
GT Y++PEL++ +CK SD++ G ++ ++ G
Sbjct: 194 FVGTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAG 230
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 11/160 (6%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
E + R+ H V+L + K + NG L ++I S ++C+ E
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 140
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISA 133
+ S +EYLH I+H D+KP NILL+ + ++DFG AK E+ +
Sbjct: 141 IVSA----LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 193
Query: 134 TRGTIGYIAPELISRNFGTVSCK-SDVYGFGMVLLEMTGG 172
GT Y++PEL++ +CK SD++ G ++ ++ G
Sbjct: 194 FVGTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAG 230
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 78/160 (48%), Gaps = 18/160 (11%)
Query: 23 HHVNVVQLLGFCSE-GSKRALVYEFMPNGSLDRH------------IFPKESRGQSCSWE 69
HH+NVV LLG C++ G ++ EF G+L + + P++ + E
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
L + A G+E+L CI H D+ NILL V + DFGLA+ K+ D V
Sbjct: 140 HLICYSFQVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 196
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
R + ++APE I T+ +SDV+ FG++L E+
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 234
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 11/160 (6%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
E + R+ H V+L + K + NG L ++I S ++C+ E
Sbjct: 82 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 141
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISA 133
+ S +EYLH I+H D+KP NILL+ + ++DFG AK E+ +
Sbjct: 142 IVSA----LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 194
Query: 134 TRGTIGYIAPELISRNFGTVSCK-SDVYGFGMVLLEMTGG 172
GT Y++PEL++ +CK SD++ G ++ ++ G
Sbjct: 195 FVGTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAG 231
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 78/158 (49%), Gaps = 16/158 (10%)
Query: 23 HHVNVVQLLGFCSE-GSKRALVYEFMPNGSLDRHIF----------PKESRGQSCSWEKL 71
HH+NVV LLG C++ G ++ EF G+L ++ P++ + E L
Sbjct: 91 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHL 150
Query: 72 HEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSI 131
+ A G+E+L + + H D+ NILL V + DFGLA+ K+ D V
Sbjct: 151 IXYSFQVAKGMEFLASRKXI---HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 132 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
R + ++APE I T+ +SDV+ FG++L E+
Sbjct: 208 GDARLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 243
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 11/160 (6%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
E + R+ H V+L + K + NG L ++I S ++C+ E
Sbjct: 59 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 118
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISA 133
+ S +EYLH I+H D+KP NILL+ + ++DFG AK E+ +
Sbjct: 119 IVSA----LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 171
Query: 134 TRGTIGYIAPELISRNFGTVSCK-SDVYGFGMVLLEMTGG 172
GT Y++PEL++ +CK SD++ G ++ ++ G
Sbjct: 172 FVGTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAG 208
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 11/160 (6%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
E + R+ H V+L + K + NG L ++I S ++C+ E
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 140
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISA 133
+ S +EYLH I+H D+KP NILL+ + ++DFG AK E+ +
Sbjct: 141 IVSA----LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 193
Query: 134 TRGTIGYIAPELISRNFGTVSCK-SDVYGFGMVLLEMTGG 172
GT Y++PEL++ +CK SD++ G ++ ++ G
Sbjct: 194 FVGTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAG 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 11/160 (6%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
E + R+ H V+L + K + NG L ++I S ++C+ E
Sbjct: 84 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 143
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISA 133
+ S +EYLH I+H D+KP NILL+ + ++DFG AK E+ +
Sbjct: 144 IVSA----LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 196
Query: 134 TRGTIGYIAPELISRNFGTVSCK-SDVYGFGMVLLEMTGG 172
GT Y++PEL++ +CK SD++ G ++ ++ G
Sbjct: 197 FVGTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAG 233
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 16/169 (9%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
S E+ EVS + I H NV+ L + L+ E + G L + KES + +
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVP----NVSDFGLAKFHP 123
E L ++ +G+ YLH+ + I H D+KP NI+L VP + DFGLA
Sbjct: 117 TEFLKQI----LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
N+F +I GT ++APE++ N+ + ++D++ G++ + G
Sbjct: 170 FGNEFKNIF---GTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 78/160 (48%), Gaps = 18/160 (11%)
Query: 23 HHVNVVQLLGFCSE-GSKRALVYEFMPNGSLDRH------------IFPKESRGQSCSWE 69
HH+NVV LLG C++ G ++ EF G+L + + P++ + E
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
L + A G+E+L CI H D+ NILL V + DFGLA+ K+ D V
Sbjct: 140 HLICYSFQVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 196
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
R + ++APE I T+ +SDV+ FG++L E+
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 234
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 78/160 (48%), Gaps = 18/160 (11%)
Query: 23 HHVNVVQLLGFCSE-GSKRALVYEFMPNGSLDRH------------IFPKESRGQSCSWE 69
HH+NVV LLG C++ G ++ EF G+L + + P++ + E
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
L + A G+E+L CI H D+ NILL V + DFGLA+ K+ D V
Sbjct: 149 HLICYSFQVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 205
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
R + ++APE I T+ +SDV+ FG++L E+
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 243
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 24/182 (13%)
Query: 3 ENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESR 62
E S+ + ++F E + + H ++V+ G C+EG +V+E+M +G L+R + S
Sbjct: 58 EASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFL---RSH 114
Query: 63 GQSCS--------------WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHN 108
G +L VAS A G+ YL + +H D+ N L+
Sbjct: 115 GPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQG 171
Query: 109 FVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLL 167
V + DFG+++ + + T I ++ PE ++ R F T +SDV+ FG+VL
Sbjct: 172 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTT---ESDVWSFGVVLW 228
Query: 168 EM 169
E+
Sbjct: 229 EI 230
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 16/169 (9%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
S E+ EVS + I H NV+ L + L+ E + G L + KES + +
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVP----NVSDFGLAKFHP 123
E L ++ +G+ YLH+ + I H D+KP NI+L VP + DFGLA
Sbjct: 117 TEFLKQI----LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
N+F +I GT ++APE++ N+ + ++D++ G++ + G
Sbjct: 170 FGNEFKNIF---GTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 11/160 (6%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
E + R+ H V+L + K + NG L ++I S ++C+ E
Sbjct: 86 RERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 145
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISA 133
+ S +EYLH I+H D+KP NILL+ + ++DFG AK E+ +
Sbjct: 146 IVSA----LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 198
Query: 134 TRGTIGYIAPELISRNFGTVSCK-SDVYGFGMVLLEMTGG 172
GT Y++PEL++ +CK SD++ G ++ ++ G
Sbjct: 199 FVGTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAG 235
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSL---DRHIFPKESRGQSC 66
++F NE+ I I + + G + + ++YE+M N S+ D + F + + +C
Sbjct: 88 DDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLD-KNYTC 146
Query: 67 --SWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPK 124
+ + + + Y+HN ++C H D+KP NIL+D N +SDFG +++
Sbjct: 147 FIPIQVIKCIIKSVLNSFSYIHNEKNIC--HRDVKPSNILMDKNGRVKLSDFGESEYMVD 204
Query: 125 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ I +RGT ++ PE S K D++ G+ L M
Sbjct: 205 K----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVM 245
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 23 HHVNVVQLLGFCSE-GSKRALVYEFMPNGSLDRHI-----------FPKESRGQSCSWEK 70
HH+NVV LLG C++ G ++ EF G+L ++ P++ + E
Sbjct: 90 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEH 149
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS 130
L + A G+E+L CI H D+ NILL V + DFGLA+ K+ D V
Sbjct: 150 LICYSFQVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 131 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
R + ++APE I T+ +SDV+ FG++L E+
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 243
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 24/182 (13%)
Query: 3 ENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESR 62
E S+ + ++F E + + H ++V+ G C+EG +V+E+M +G L+R + S
Sbjct: 52 EASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFL---RSH 108
Query: 63 GQSCS--------------WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHN 108
G +L VAS A G+ YL + +H D+ N L+
Sbjct: 109 GPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQG 165
Query: 109 FVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLL 167
V + DFG+++ + + T I ++ PE ++ R F T +SDV+ FG+VL
Sbjct: 166 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTT---ESDVWSFGVVLW 222
Query: 168 EM 169
E+
Sbjct: 223 EI 224
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 16/169 (9%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
S E+ EVS + I H NV+ L + L+ E + G L + KES + +
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVP----NVSDFGLAKFHP 123
E L ++ +G+ YLH+ + I H D+KP NI+L VP + DFGLA
Sbjct: 117 TEFLKQI----LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
N+F +I GT ++APE++ N+ + ++D++ G++ + G
Sbjct: 170 FGNEFKNIF---GTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 16/169 (9%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
S E+ EVS + I H NV+ L + L+ E + G L + KES + +
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVP----NVSDFGLAKFHP 123
E L ++ +G+ YLH+ + I H D+KP NI+L VP + DFGLA
Sbjct: 117 TEFLKQI----LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
N+F +I GT ++APE++ N+ + ++D++ G++ + G
Sbjct: 170 FGNEFKNIF---GTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 16/169 (9%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
S E+ EVS + I H NV+ L + L+ E + G L + KES + +
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVP----NVSDFGLAKFHP 123
E L ++ +G+ YLH+ + I H D+KP NI+L VP + DFGLA
Sbjct: 117 TEFLKQI----LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
N+F +I GT ++APE++ N+ + ++D++ G++ + G
Sbjct: 170 FGNEFKNIF---GTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 16/169 (9%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
S E+ EVS + I H NV+ L + L+ E + G L + KES + +
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVP----NVSDFGLAKFHP 123
E L ++ +G+ YLH+ + I H D+KP NI+L VP + DFGLA
Sbjct: 117 TEFLKQI----LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
N+F +I GT ++APE++ N+ + ++D++ G++ + G
Sbjct: 170 FGNEFKNIF---GTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 16/169 (9%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
S E+ EVS + I H NV+ L + L+ E + G L + KES + +
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVP----NVSDFGLAKFHP 123
E L ++ +G+ YLH+ + I H D+KP NI+L VP + DFGLA
Sbjct: 117 TEFLKQI----LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
N+F +I GT ++APE++ N+ + ++D++ G++ + G
Sbjct: 170 FGNEFKNIF---GTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 16/169 (9%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
S E+ EVS + I H NV+ L + L+ E + G L + KES + +
Sbjct: 56 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA 115
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVP----NVSDFGLAKFHP 123
E L ++ +G+ YLH+ + I H D+KP NI+L VP + DFGLA
Sbjct: 116 TEFLKQI----LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 168
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
N+F +I GT ++APE++ N+ + ++D++ G++ + G
Sbjct: 169 FGNEFKNIF---GTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 212
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 16/169 (9%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
S E+ EVS + I H NV+ L + L+ E + G L + KES + +
Sbjct: 56 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA 115
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVP----NVSDFGLAKFHP 123
E L ++ +G+ YLH+ + I H D+KP NI+L VP + DFGLA
Sbjct: 116 TEFLKQI----LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 168
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
N+F +I GT ++APE++ N+ + ++D++ G++ + G
Sbjct: 169 FGNEFKNIF---GTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 212
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 16/169 (9%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
S E+ EVS + I H NV+ L + L+ E + G L + KES + +
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVP----NVSDFGLAKFHP 123
E L ++ +G+ YLH+ + I H D+KP NI+L VP + DFGLA
Sbjct: 117 TEFLKQI----LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
N+F +I GT ++APE++ N+ + ++D++ G++ + G
Sbjct: 170 FGNEFKNIF---GTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 16/169 (9%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
S E+ EVS + I H NV+ L + L+ E + G L + KES + +
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVP----NVSDFGLAKFHP 123
E L ++ +G+ YLH+ + I H D+KP NI+L VP + DFGLA
Sbjct: 117 TEFLKQI----LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
N+F +I GT ++APE++ N+ + ++D++ G++ + G
Sbjct: 170 FGNEFKNIF---GTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 24/182 (13%)
Query: 3 ENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESR 62
E S+ + ++F E + + H ++V+ G C+EG +V+E+M +G L+R + S
Sbjct: 81 EASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFL---RSH 137
Query: 63 GQSC--------------SWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHN 108
G +L VAS A G+ YL + +H D+ N L+
Sbjct: 138 GPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQG 194
Query: 109 FVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLL 167
V + DFG+++ + + T I ++ PE ++ R F T +SDV+ FG+VL
Sbjct: 195 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTT---ESDVWSFGVVLW 251
Query: 168 EM 169
E+
Sbjct: 252 EI 253
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 78/160 (48%), Gaps = 18/160 (11%)
Query: 23 HHVNVVQLLGFCSE-GSKRALVYEFMPNGSLDRH------------IFPKESRGQSCSWE 69
HH+NVV LLG C++ G ++ EF G+L + + P++ + E
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
L + A G+E+L CI H D+ NILL V + DFGLA+ K+ D V
Sbjct: 149 HLICYSFQVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDXV 205
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
R + ++APE I T+ +SDV+ FG++L E+
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 243
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 11/178 (6%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGS-LD--RHIFP 58
LE + S +E + E+ + + HH N+V + LV + + GS LD +HI
Sbjct: 45 LEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVA 104
Query: 59 K-ESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG 117
K E + + + G+EYLH + H D+K NILL + ++DFG
Sbjct: 105 KGEHKSGVLDESTIATILREVLEGLEYLHKNGQI---HRDVKAGNILLGEDGSVQIADFG 161
Query: 118 LAKFHPKENDFVSISATR---GTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
++ F D + GT ++APE++ + G K+D++ FG+ +E+ G
Sbjct: 162 VSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YDFKADIWSFGITAIELATG 218
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 9/159 (5%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
E + R+ H V+L + K + NG L ++I S ++C+ E
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 140
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISA 133
+ S +EYLH I+H D+KP NILL+ + ++DFG AK E+ +
Sbjct: 141 IVSA----LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 193
Query: 134 TRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT Y++PEL++ S SD++ G ++ ++ G
Sbjct: 194 FVGTAQYVSPELLTEKSAXKS--SDLWALGCIIYQLVAG 230
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 92/184 (50%), Gaps = 24/184 (13%)
Query: 2 LENSKFSA-EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIF--- 57
L++ +A ++F E + + H ++V+ G C +G +V+E+M +G L++ +
Sbjct: 53 LKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHG 112
Query: 58 ----------PKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDH 107
P++++G+ + LH +AS A G+ YL +H D+ N L+
Sbjct: 113 PDAMILVDGQPRQAKGELGLSQMLH-IASQIASGMVYL---ASQHFVHRDLATRNCLVGA 168
Query: 108 NFVPNVSDFGLAKFHPKENDFVSISA-TRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMV 165
N + + DFG+++ D+ + T I ++ PE ++ R F T +SDV+ FG++
Sbjct: 169 NLLVKIGDFGMSR-DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTT---ESDVWSFGVI 224
Query: 166 LLEM 169
L E+
Sbjct: 225 LWEI 228
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 11/178 (6%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGS-LD--RHIFP 58
LE + S +E + E+ + + HH N+V + LV + + GS LD +HI
Sbjct: 50 LEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVA 109
Query: 59 K-ESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG 117
K E + + + G+EYLH + H D+K NILL + ++DFG
Sbjct: 110 KGEHKSGVLDESTIATILREVLEGLEYLHKNGQI---HRDVKAGNILLGEDGSVQIADFG 166
Query: 118 LAKFHPKENDFVSISATR---GTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
++ F D + GT ++APE++ + G K+D++ FG+ +E+ G
Sbjct: 167 VSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YDFKADIWSFGITAIELATG 223
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 82/169 (48%), Gaps = 16/169 (9%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
S EE EV+ + I H N++ L + L+ E + G L + KES + +
Sbjct: 51 SREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEA 110
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPN----VSDFGLAKFHP 123
+ L ++ G+ YLH+ I H D+KP NI+L VPN + DFG+A
Sbjct: 111 TQFLKQILD----GVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE 163
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
N+F +I GT ++APE++ N+ + ++D++ G++ + G
Sbjct: 164 AGNEFKNIF---GTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 207
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 82/169 (48%), Gaps = 16/169 (9%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
S EE EV+ + I H N++ L + L+ E + G L + KES + +
Sbjct: 58 SREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEA 117
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPN----VSDFGLAKFHP 123
+ L ++ G+ YLH+ I H D+KP NI+L VPN + DFG+A
Sbjct: 118 TQFLKQILD----GVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE 170
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
N+F +I GT ++APE++ N+ + ++D++ G++ + G
Sbjct: 171 AGNEFKNIF---GTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 82/169 (48%), Gaps = 16/169 (9%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
S EE EV+ + I H N++ L + L+ E + G L + KES + +
Sbjct: 72 SREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEA 131
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPN----VSDFGLAKFHP 123
+ L ++ G+ YLH+ I H D+KP NI+L VPN + DFG+A
Sbjct: 132 TQFLKQILD----GVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE 184
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
N+F +I GT ++APE++ N+ + ++D++ G++ + G
Sbjct: 185 AGNEFKNIF---GTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 228
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 16/169 (9%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
S E+ EVS + I H NV+ L + L+ E + G L + KES + +
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEA 116
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVP----NVSDFGLAKFHP 123
E L ++ +G+ YLH+ + I H D+KP NI+L VP + DFGLA
Sbjct: 117 TEFLKQI----LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
N+F +I GT ++APE++ N+ + ++D++ G++ + G
Sbjct: 170 FGNEFKNIF---GTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 16/168 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+EF EV + ++H N+V+L G + +V EF+P G L + + W
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLL---DKAHPIKWS 122
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILL---DHN--FVPNVSDFGLAKFHPK 124
+ A GIEY+ N + I+H D++ NI L D N V+DFG +
Sbjct: 123 VKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS----- 176
Query: 125 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
+ S+S G ++APE I + + K+D Y F M+L + G
Sbjct: 177 QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 16/168 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+EF EV + ++H N+V+L G + +V EF+P G L + + W
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLL---DKAHPIKWS 122
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILL---DHN--FVPNVSDFGLAKFHPK 124
+ A GIEY+ N + I+H D++ NI L D N V+DF L+
Sbjct: 123 VKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS----- 176
Query: 125 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
+ S+S G ++APE I + + K+D Y F M+L + G
Sbjct: 177 QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRA---LVYEFMPNGSLDRHIFPKESRGQSCS 67
+F E+ + +H +V+ G S G R LV E++P+G L + +R +
Sbjct: 70 DFQREIQILKALHSDFIVKYRGV-SYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDA-- 126
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKEND 127
+L +S G+EYL G C+ H D+ NIL++ ++DFGLAK P + D
Sbjct: 127 -SRLLLYSSQICKGMEYL--GSRRCV-HRDLAARNILVESEAHVKIADFGLAKLLPLDKD 182
Query: 128 FVSISAT-RGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ + + I + APE +S N S +SDV+ FG+VL E+
Sbjct: 183 YYVVREPGQSPIFWYAPESLSDNI--FSRQSDVWSFGVVLYEL 223
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRA---LVYEFMPNGSLDRHIFPKESRGQSCS 67
+F E+ + +H +V+ G S G R LV E++P+G L + +R +
Sbjct: 57 DFQREIQILKALHSDFIVKYRGV-SYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDA-- 113
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKEND 127
+L +S G+EYL G C+ H D+ NIL++ ++DFGLAK P + D
Sbjct: 114 -SRLLLYSSQICKGMEYL--GSRRCV-HRDLAARNILVESEAHVKIADFGLAKLLPLDKD 169
Query: 128 FVSISAT-RGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ + + I + APE +S N S +SDV+ FG+VL E+
Sbjct: 170 YYVVREPGQSPIFWYAPESLSDNI--FSRQSDVWSFGVVLYEL 210
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRA---LVYEFMPNGSLDRHIFPKESRGQSCS 67
+F E+ + +H +V+ G S G R LV E++P+G L + +R +
Sbjct: 58 DFQREIQILKALHSDFIVKYRGV-SYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDA-- 114
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKEND 127
+L +S G+EYL G C+ H D+ NIL++ ++DFGLAK P + D
Sbjct: 115 -SRLLLYSSQICKGMEYL--GSRRCV-HRDLAARNILVESEAHVKIADFGLAKLLPLDKD 170
Query: 128 FVSISAT-RGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ + + I + APE +S N S +SDV+ FG+VL E+
Sbjct: 171 YYVVREPGQSPIFWYAPESLSDNI--FSRQSDVWSFGVVLYEL 211
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 88/194 (45%), Gaps = 26/194 (13%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E NEV + HH NVV + G + +V EF+ G+L + + E
Sbjct: 87 ELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIV-----THTRMNEE 141
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG----LAKFHPKE 125
++ V + YLHN ++H DIK +ILL + +SDFG ++K PK
Sbjct: 142 QIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKR 198
Query: 126 NDFVSISATRGTIGYIAPELISR-NFGTVSCKSDVYGFGMVLLEMTGGR----RNSNLKA 180
V GT ++APE+ISR +GT + D++ G++++EM G L+A
Sbjct: 199 KXLV------GTPYWMAPEVISRLPYGT---EVDIWSLGIMVIEMIDGEPPYFNEPPLQA 249
Query: 181 TRSSKAYFPSWVSD 194
R + P V D
Sbjct: 250 MRRIRDSLPPRVKD 263
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 109/243 (44%), Gaps = 37/243 (15%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSL-----DRHIFP 58
S+ + FI E+ + R++H N+V+L G C + LV E+ GSL P
Sbjct: 41 ESESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLP 98
Query: 59 KESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILL-DHNFVPNVSDFG 117
+ + SW + G+ YLH+ ++H D+KP N+LL V + DFG
Sbjct: 99 YYTAAHAMSW------CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG 152
Query: 118 LAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSN 177
A + ++ +G+ ++APE+ + S K DV+ +G++L E+ R+ +
Sbjct: 153 TAC-----DIQTHMTNNKGSAAWMAPEVFEGS--NYSEKCDVFSWGIILWEVITRRKPFD 205
Query: 178 LKATRSSKAYFPSWVSDQLNKGGNLEL-RNVTE-IESMIARKLCVIGLWCIQVKPADRPS 235
A+ W ++ G L +N+ + IES++ R C P+ RPS
Sbjct: 206 ---EIGGPAFRIMWA---VHNGTRPPLIKNLPKPIESLMTR--------CWSKDPSQRPS 251
Query: 236 MTK 238
M +
Sbjct: 252 MEE 254
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 110/243 (45%), Gaps = 37/243 (15%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI-----FP 58
S+ + FI E+ + R++H N+V+L G C + LV E+ GSL + P
Sbjct: 40 ESESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLP 97
Query: 59 KESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILL-DHNFVPNVSDFG 117
+ + SW + G+ YLH+ ++H D+KP N+LL V + DFG
Sbjct: 98 YYTAAHAMSW------CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG 151
Query: 118 LAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSN 177
A + ++ +G+ ++APE+ + S K DV+ +G++L E+ R+ +
Sbjct: 152 TAC-----DIQTHMTNNKGSAAWMAPEVFEGS--NYSEKCDVFSWGIILWEVITRRKPFD 204
Query: 178 LKATRSSKAYFPSWVSDQLNKGGNLEL-RNVTE-IESMIARKLCVIGLWCIQVKPADRPS 235
A+ W ++ G L +N+ + IES++ R C P+ RPS
Sbjct: 205 ---EIGGPAFRIMWA---VHNGTRPPLIKNLPKPIESLMTR--------CWSKDPSQRPS 250
Query: 236 MTK 238
M +
Sbjct: 251 MEE 253
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 101/236 (42%), Gaps = 40/236 (16%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI--FPKESR--GQSCSW 68
I E+ + +++H NV++ E ++ +V E G L R I F K+ R + W
Sbjct: 80 IKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVW 139
Query: 69 EKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDF 128
+ ++ S +E++H+ ++H DIKP N+ + V + D GL +F +
Sbjct: 140 KYFVQLCSA----LEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT-- 190
Query: 129 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT-------GGRRNSNLKAT 181
+ + GT Y++PE I N + KSD++ G +L EM G + N
Sbjct: 191 TAAHSLVGTPYYMSPERIHEN--GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCK 248
Query: 182 RSSKAYFPSWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVKPADRPSMT 237
+ + +P SD ++ ELR + + CI P RP +T
Sbjct: 249 KIEQCDYPPLPSDHYSE----ELRQLVNM--------------CINPDPEKRPDVT 286
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
S EE EVS + ++ H NV+ L + L+ E + G L F ++ +S S
Sbjct: 58 SREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLS 113
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNI-LLDHNF-VPNVS--DFGLAKFHP 123
E+ G+ YLH I H D+KP NI LLD N +P++ DFGLA H
Sbjct: 114 EEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--HE 168
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
E D V GT ++APE++ N+ + ++D++ G++ + G
Sbjct: 169 IE-DGVEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
S EE EVS + ++ H NV+ L + L+ E + G L F ++ +S S
Sbjct: 58 SREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLS 113
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNI-LLDHNF-VPNVS--DFGLAKFHP 123
E+ G+ YLH I H D+KP NI LLD N +P++ DFGLA H
Sbjct: 114 EEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--HE 168
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
E D V GT ++APE++ N+ + ++D++ G++ + G
Sbjct: 169 IE-DGVEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 84/173 (48%), Gaps = 20/173 (11%)
Query: 11 EFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+ I+E+ + I H N++ LLG C++ ++ E+ G+L ++ +E G S+
Sbjct: 79 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYN 138
Query: 70 KLH------------EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG 117
H A A G+EYL CI H D+ N+L+ + V ++DFG
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFG 195
Query: 118 LAKFHPKENDFVSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 169
LA+ + + + R + ++APE L R + + +SDV+ FG++L E+
Sbjct: 196 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 245
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
S EE EVS + ++ H NV+ L + L+ E + G L F ++ +S S
Sbjct: 58 SREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLS 113
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNI-LLDHNF-VPNVS--DFGLAKFHP 123
E+ G+ YLH I H D+KP NI LLD N +P++ DFGLA H
Sbjct: 114 EEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--HE 168
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
E D V GT ++APE++ N+ + ++D++ G++ + G
Sbjct: 169 IE-DGVEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 7/106 (6%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
++YL N I+H D+KP NILLD + +++DF +A P+E I+ GT Y
Sbjct: 127 ALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE---TQITTMAGTKPY 180
Query: 141 IAPELISRNFGT-VSCKSDVYGFGMVLLEMTGGRRNSNLKATRSSK 185
+APE+ S G S D + G+ E+ GRR +++++ SSK
Sbjct: 181 MAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSK 226
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
S EE EVS + ++ H NV+ L + L+ E + G L F ++ +S S
Sbjct: 58 SREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLS 113
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNI-LLDHNF-VPNVS--DFGLAKFHP 123
E+ G+ YLH I H D+KP NI LLD N +P++ DFGLA H
Sbjct: 114 EEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--HE 168
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
E D V GT ++APE++ N+ + ++D++ G++ + G
Sbjct: 169 IE-DGVEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 13/163 (7%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRA---LVYEFMPNGSLDRHIFPKESRGQSCS 67
+F E+ + +H +V+ G S G R LV E++P+G L + +R +
Sbjct: 54 DFQREIQILKALHSDFIVKYRGV-SYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDA-- 110
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKEND 127
+L +S G+EYL G C+ H D+ NIL++ ++DFGLAK P + D
Sbjct: 111 -SRLLLYSSQICKGMEYL--GSRRCV-HRDLAARNILVESEAHVKIADFGLAKLLPLDKD 166
Query: 128 FVSISAT-RGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ + I + APE +S N S +SDV+ FG+VL E+
Sbjct: 167 XXVVREPGQSPIFWYAPESLSDNI--FSRQSDVWSFGVVLYEL 207
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 82/166 (49%), Gaps = 11/166 (6%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQS----- 65
EF+NE S + +VV+LLG S+G +V E M +G L ++ ++
Sbjct: 65 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 124
Query: 66 -CSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPK 124
+ +++ ++A+ A G+ YL+ +H D+ N ++ H+F + DFG+ + +
Sbjct: 125 PPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 181
Query: 125 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
+ + + ++APE S G + SD++ FG+VL E+T
Sbjct: 182 TDYYRKGGKGLLPVRWMAPE--SLKDGVFTTSSDMWSFGVVLWEIT 225
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
S EE EVS + ++ H NV+ L + L+ E + G L F ++ +S S
Sbjct: 58 SREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLS 113
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNI-LLDHNF-VPNVS--DFGLAKFHP 123
E+ G+ YLH I H D+KP NI LLD N +P++ DFGLA H
Sbjct: 114 EEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--HE 168
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
E D V GT ++APE++ N+ + ++D++ G++ + G
Sbjct: 169 IE-DGVEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 82/166 (49%), Gaps = 11/166 (6%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQS----- 65
EF+NE S + +VV+LLG S+G +V E M +G L ++ ++
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 66 -CSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPK 124
+ +++ ++A+ A G+ YL+ +H D+ N ++ H+F + DFG+ + +
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 125 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
+ + + ++APE S G + SD++ FG+VL E+T
Sbjct: 183 TDYYRKGGKGLLPVRWMAPE--SLKDGVFTTSSDMWSFGVVLWEIT 226
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 82/174 (47%), Gaps = 12/174 (6%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGS-----KRALVYEFMPNGSLDRHIFP 58
+S+ EEF++E + + H NV++LLG C E S K ++ FM G L ++
Sbjct: 75 SSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLY 134
Query: 59 K--ESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDF 116
E+ + + L + A G+EYL N LH D+ N +L + V+DF
Sbjct: 135 SRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADF 191
Query: 117 GLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
GL+K + + + + +IA E ++ T KSDV+ FG+ + E+
Sbjct: 192 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYT--SKSDVWAFGVTMWEIA 243
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 80/160 (50%), Gaps = 11/160 (6%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+E + E + + ++ + +V+++G C E LV E G L++++ E
Sbjct: 57 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE 115
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK-FHPKENDF 128
+H+V+ G ++YL + +H D+ N+LL +SDFGL+K EN +
Sbjct: 116 LVHQVSMG----MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXY 168
Query: 129 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLE 168
+ + + + + APE I N+ S KSDV+ FG+++ E
Sbjct: 169 KAQTHGKWPVKWYAPECI--NYYKFSSKSDVWSFGVLMWE 206
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 12/167 (7%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPK-ESR 62
K EE + E + ++ + +V+L+G C + LV E G L + + K E
Sbjct: 49 TEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEI 107
Query: 63 GQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK-F 121
S E LH+V+ G++YL + +H D+ N+LL + +SDFGL+K
Sbjct: 108 PVSNVAELLHQVS----MGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL 160
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLE 168
++ + + SA + + + APE I NF S +SDV+ +G+ + E
Sbjct: 161 GADDSYYTARSAGKWPLKWYAPECI--NFRKFSSRSDVWSYGVTMWE 205
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 16/167 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
EE EVS + ++ H N++ L + L+ E + G L F ++ +S S E
Sbjct: 60 EEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEE 115
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNI-LLDHNF-VPNVS--DFGLAKFHPKE 125
+ G+ YLH I H D+KP NI LLD N +P++ DFGLA H E
Sbjct: 116 EATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--HEIE 170
Query: 126 NDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
D V GT ++APE++ N+ + ++D++ G++ + G
Sbjct: 171 -DGVEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 12/167 (7%)
Query: 10 EEFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPK------ESR 62
E ++E+ + + H N+V LLG C+ G ++ E+ G L + K +
Sbjct: 86 EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKED 145
Query: 63 GQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFH 122
G+ L +S A G+ +L CI H D+ N+LL + V + DFGLA+
Sbjct: 146 GRPLELRDLLHFSSQVAQGMAFL--ASKNCI-HRDVAARNVLLTNGHVAKIGDFGLARDI 202
Query: 123 PKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+++++ R + ++APE I TV +SDV+ +G++L E+
Sbjct: 203 MNDSNYIVKGNARLPVKWMAPESIFDCVYTV--QSDVWSYGILLWEI 247
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 12/167 (7%)
Query: 10 EEFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPK------ESR 62
E ++E+ + + H N+V LLG C+ G ++ E+ G L + K +
Sbjct: 94 EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKED 153
Query: 63 GQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFH 122
G+ L +S A G+ +L CI H D+ N+LL + V + DFGLA+
Sbjct: 154 GRPLELRDLLHFSSQVAQGMAFL--ASKNCI-HRDVAARNVLLTNGHVAKIGDFGLARDI 210
Query: 123 PKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+++++ R + ++APE I TV +SDV+ +G++L E+
Sbjct: 211 MNDSNYIVKGNARLPVKWMAPESIFDCVYTV--QSDVWSYGILLWEI 255
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 81/166 (48%), Gaps = 11/166 (6%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQS----- 65
EF+NE S + +VV+LLG S+G +V E M +G L ++ ++
Sbjct: 63 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 122
Query: 66 -CSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPK 124
+ +++ ++A+ A G+ YL+ +H D+ N ++ H+F + DFG+ + +
Sbjct: 123 PPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 179
Query: 125 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
+ + ++APE S G + SD++ FG+VL E+T
Sbjct: 180 TDXXRKGGKGLLPVRWMAPE--SLKDGVFTTSSDMWSFGVVLWEIT 223
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 82/159 (51%), Gaps = 13/159 (8%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRAL--VYEFMPNGSLDRHIFPKESRGQSCSWEKL 71
E+ + ++H ++++ G C + +++L V E++P GSL R P+ S G + +L
Sbjct: 65 QEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL-RDYLPRHSIGLA----QL 119
Query: 72 HEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSI 131
A G+ YLH+ +H ++ N+LLD++ + + DFGLAK P+ +++ +
Sbjct: 120 LLFAQQICEGMAYLHSQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV 176
Query: 132 SATRGT-IGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ + + APE + SDV+ FG+ L E+
Sbjct: 177 REDGDSPVFWYAPECLKEY--KFYYASDVWSFGVTLYEL 213
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 78/160 (48%), Gaps = 16/160 (10%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
+ E+ + + H N++ LL S +LV++FM D + K++ + +
Sbjct: 60 LREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM---ETDLEVIIKDN-SLVLTPSHIK 115
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK-FHPKENDFVSI 131
T G+EYLH ILH D+KP+N+LLD N V ++DFGLAK F +
Sbjct: 116 AYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQ 172
Query: 132 SATRGTIGYIAPELI--SRNFGTVSCKSDVYGFGMVLLEM 169
TR Y APEL+ +R +G D++ G +L E+
Sbjct: 173 VVTR---WYRAPELLFGARMYG---VGVDMWAVGCILAEL 206
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 80/160 (50%), Gaps = 11/160 (6%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+E + E + + ++ + +V+++G C E LV E G L++++ E
Sbjct: 63 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE 121
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK-FHPKENDF 128
+H+V+ G ++YL + +H D+ N+LL +SDFGL+K EN +
Sbjct: 122 LVHQVSMG----MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 174
Query: 129 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLE 168
+ + + + + APE I N+ S KSDV+ FG+++ E
Sbjct: 175 KAQTHGKWPVKWYAPECI--NYYKFSSKSDVWSFGVLMWE 212
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 81/166 (48%), Gaps = 11/166 (6%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQS----- 65
EF+NE S + +VV+LLG S+G +V E M +G L ++ ++
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 66 -CSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPK 124
+ +++ ++A+ A G+ YL+ +H D+ N ++ H+F + DFG+ + +
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 125 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
+ + ++APE S G + SD++ FG+VL E+T
Sbjct: 183 TDXXRKGGKGLLPVRWMAPE--SLKDGVFTTSSDMWSFGVVLWEIT 226
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 80/160 (50%), Gaps = 11/160 (6%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+E + E + + ++ + +V+++G C E LV E G L++++ E
Sbjct: 57 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE 115
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK-FHPKENDF 128
+H+V+ G ++YL + +H D+ N+LL +SDFGL+K EN +
Sbjct: 116 LVHQVSMG----MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 168
Query: 129 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLE 168
+ + + + + APE I N+ S KSDV+ FG+++ E
Sbjct: 169 KAQTHGKWPVKWYAPECI--NYYKFSSKSDVWSFGVLMWE 206
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 81/166 (48%), Gaps = 11/166 (6%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQS----- 65
EF+NE S + +VV+LLG S+G +V E M +G L ++ ++
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 66 -CSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPK 124
+ +++ ++A+ A G+ YL+ +H D+ N ++ H+F + DFG+ + +
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 125 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
+ + ++APE S G + SD++ FG+VL E+T
Sbjct: 183 TDXXRKGGKGLLPVRWMAPE--SLKDGVFTTSSDMWSFGVVLWEIT 226
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 80/160 (50%), Gaps = 11/160 (6%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+E + E + + ++ + +V+++G C E LV E G L++++ E
Sbjct: 53 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE 111
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK-FHPKENDF 128
+H+V+ G ++YL + +H D+ N+LL +SDFGL+K EN +
Sbjct: 112 LVHQVSMG----MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 164
Query: 129 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLE 168
+ + + + + APE I N+ S KSDV+ FG+++ E
Sbjct: 165 KAQTHGKWPVKWYAPECI--NYYKFSSKSDVWSFGVLMWE 202
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 80/160 (50%), Gaps = 11/160 (6%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+E + E + + ++ + +V+++G C E LV E G L++++ E
Sbjct: 51 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE 109
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK-FHPKENDF 128
+H+V+ G ++YL + +H D+ N+LL +SDFGL+K EN +
Sbjct: 110 LVHQVSMG----MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 162
Query: 129 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLE 168
+ + + + + APE I N+ S KSDV+ FG+++ E
Sbjct: 163 KAQTHGKWPVKWYAPECI--NYYKFSSKSDVWSFGVLMWE 200
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 81/160 (50%), Gaps = 11/160 (6%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+E + E + + ++ + +V+++G C E LV E G L++++ + + +
Sbjct: 73 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDK 127
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK-FHPKENDF 128
+ E+ + G++YL + +H D+ N+LL +SDFGL+K EN +
Sbjct: 128 NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 184
Query: 129 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLE 168
+ + + + + APE I N+ S KSDV+ FG+++ E
Sbjct: 185 KAQTHGKWPVKWYAPECI--NYYKFSSKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 81/160 (50%), Gaps = 11/160 (6%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+E + E + + ++ + +V+++G C E LV E G L++++ + + +
Sbjct: 73 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDK 127
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK-FHPKENDF 128
+ E+ + G++YL + +H D+ N+LL +SDFGL+K EN +
Sbjct: 128 NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 184
Query: 129 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLE 168
+ + + + + APE I N+ S KSDV+ FG+++ E
Sbjct: 185 KAQTHGKWPVKWYAPECI--NYYKFSSKSDVWSFGVLMWE 222
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 80/160 (50%), Gaps = 11/160 (6%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+E + E + + ++ + +V+++G C E LV E G L++++ E
Sbjct: 71 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE 129
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK-FHPKENDF 128
+H+V+ G ++YL + +H D+ N+LL +SDFGL+K EN +
Sbjct: 130 LVHQVSMG----MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 182
Query: 129 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLE 168
+ + + + + APE I N+ S KSDV+ FG+++ E
Sbjct: 183 KAQTHGKWPVKWYAPECI--NYYKFSSKSDVWSFGVLMWE 220
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 18/173 (10%)
Query: 10 EEFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSW 68
E ++E+ + + H N+V LLG C+ G ++ E+ G L + K G S+
Sbjct: 94 EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSY 153
Query: 69 EKLH------------EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDF 116
H +S A G+ +L CI H D+ N+LL + V + DF
Sbjct: 154 NPSHNPEEQLSSRDLLHFSSQVAQGMAFL--ASKNCI-HRDVAARNVLLTNGHVAKIGDF 210
Query: 117 GLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
GLA+ +++++ R + ++APE I TV +SDV+ +G++L E+
Sbjct: 211 GLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTV--QSDVWSYGILLWEI 261
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 82/172 (47%), Gaps = 23/172 (13%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQS----- 65
EF+NE S + +VV+LLG S+G +V E M +G L ++ ++
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 66 -CSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPK 124
+ +++ ++A+ A G+ YL+ +H D+ N ++ H+F + DFG+ +
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR---- 178
Query: 125 ENDFVSISATRG------TIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
D + R + ++APE S G + SD++ FG+VL E+T
Sbjct: 179 --DIYETAYYRKGGKGLLPVRWMAPE--SLKDGVFTTSSDMWSFGVVLWEIT 226
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 86/173 (49%), Gaps = 20/173 (11%)
Query: 11 EFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+ ++E+ + I H N++ LLG C++ ++ E+ G+L ++ + G S++
Sbjct: 73 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 132
Query: 70 ---------KLHEVASGT---AHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG 117
++ S T A G+EYL CI H D+ N+L+ N V ++DFG
Sbjct: 133 INRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCI-HRDLTARNVLVTENNVMKIADFG 189
Query: 118 LAKFHPKENDFVSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 169
LA+ + + + R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 190 LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 239
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 87/173 (50%), Gaps = 20/173 (11%)
Query: 11 EFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+ ++E+ + I H N++ LLG C++ ++ E+ G+L ++ + G S++
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 70 ---------KLHEVASGT---AHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG 117
++ S T A G+EYL CI H D+ N+L+ N V ++DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFG 202
Query: 118 LAKFHPKENDFVSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 169
LA+ + + + + R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 203 LARDINNIDYYKNTTNGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 86/173 (49%), Gaps = 20/173 (11%)
Query: 11 EFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+ ++E+ + I H N++ LLG C++ ++ E+ G+L ++ + G S++
Sbjct: 132 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 191
Query: 70 ---------KLHEVASGT---AHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG 117
++ S T A G+EYL CI H D+ N+L+ N V ++DFG
Sbjct: 192 INRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFG 248
Query: 118 LAKFHPKENDFVSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 169
LA+ + + + R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 249 LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 298
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 81/159 (50%), Gaps = 13/159 (8%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRAL--VYEFMPNGSLDRHIFPKESRGQSCSWEKL 71
E+ + ++H ++++ G C + +++L V E++P GSL R P+ S G + +L
Sbjct: 65 QEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL-RDYLPRHSIGLA----QL 119
Query: 72 HEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSI 131
A G+ YLH +H ++ N+LLD++ + + DFGLAK P+ +++ +
Sbjct: 120 LLFAQQICEGMAYLHAQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV 176
Query: 132 SATRGT-IGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ + + APE + SDV+ FG+ L E+
Sbjct: 177 REDGDSPVFWYAPECLKEY--KFYYASDVWSFGVTLYEL 213
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 86/173 (49%), Gaps = 20/173 (11%)
Query: 11 EFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+ ++E+ + I H N++ LLG C++ ++ E+ G+L ++ + G S++
Sbjct: 86 DLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 70 ---------KLHEVASGT---AHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG 117
++ S T A G+EYL CI H D+ N+L+ N V ++DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFG 202
Query: 118 LAKFHPKENDFVSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 169
LA+ + + + R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 203 LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 86/173 (49%), Gaps = 20/173 (11%)
Query: 11 EFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+ ++E+ + I H N++ LLG C++ ++ E+ G+L ++ + G S++
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 70 ---------KLHEVASGT---AHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG 117
++ S T A G+EYL CI H D+ N+L+ N V ++DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFG 202
Query: 118 LAKFHPKENDFVSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 169
LA+ + + + R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 203 LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 86/173 (49%), Gaps = 20/173 (11%)
Query: 11 EFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+ ++E+ + I H N++ LLG C++ ++ E+ G+L ++ + G S++
Sbjct: 86 DLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 70 ---------KLHEVASGT---AHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG 117
++ S T A G+EYL CI H D+ N+L+ N V ++DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFG 202
Query: 118 LAKFHPKENDFVSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 169
LA+ + + + R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 203 LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 86/173 (49%), Gaps = 20/173 (11%)
Query: 11 EFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+ ++E+ + I H N++ LLG C++ ++ E+ G+L ++ + G S++
Sbjct: 78 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 137
Query: 70 ---------KLHEVASGT---AHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG 117
++ S T A G+EYL CI H D+ N+L+ N V ++DFG
Sbjct: 138 INRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFG 194
Query: 118 LAKFHPKENDFVSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 169
LA+ + + + R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 195 LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 244
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 86/173 (49%), Gaps = 20/173 (11%)
Query: 11 EFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+ ++E+ + I H N++ LLG C++ ++ E+ G+L ++ + G S++
Sbjct: 75 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 134
Query: 70 ---------KLHEVASGT---AHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG 117
++ S T A G+EYL CI H D+ N+L+ N V ++DFG
Sbjct: 135 INRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFG 191
Query: 118 LAKFHPKENDFVSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 169
LA+ + + + R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 192 LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 241
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 86/173 (49%), Gaps = 20/173 (11%)
Query: 11 EFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+ ++E+ + I H N++ LLG C++ ++ E+ G+L ++ + G S++
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 70 ---------KLHEVASGT---AHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG 117
++ S T A G+EYL CI H D+ N+L+ N V ++DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMRIADFG 202
Query: 118 LAKFHPKENDFVSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 169
LA+ + + + R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 203 LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 28/176 (15%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGS----KRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E+ + + H N++Q + GS + L+ F GSL ++ +G +W
Sbjct: 58 REIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYL-----KGNIITWN 112
Query: 70 KLHEVASGTAHGIEYLHNGCDVC--------ILHLDIKPHNILLDHNFVPNVSDFGLA-K 120
+L VA + G+ YLH C I H D K N+LL + ++DFGLA +
Sbjct: 113 ELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVR 172
Query: 121 FHPKENDFVSISATRGTIG---YIAPELI--SRNFGTVS-CKSDVYGFGMVLLEMT 170
F P + T G +G Y+APE++ + NF + + D+Y G+VL E+
Sbjct: 173 FEPGKPP----GDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELV 224
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 80/160 (50%), Gaps = 11/160 (6%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+E + E + + ++ + +V+++G C E LV E G L++++ E
Sbjct: 416 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE 474
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK-FHPKENDF 128
+H+V+ G ++YL + +H D+ N+LL +SDFGL+K EN +
Sbjct: 475 LVHQVSMG----MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 527
Query: 129 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLE 168
+ + + + + APE I N+ S KSDV+ FG+++ E
Sbjct: 528 KAQTHGKWPVKWYAPECI--NYYKFSSKSDVWSFGVLMWE 565
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 20/173 (11%)
Query: 11 EFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+ I+E+ + I H N++ LLG C++ ++ E+ G+L ++ + G S+
Sbjct: 68 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 127
Query: 70 KLH------------EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG 117
H A A G+EYL CI H D+ N+L+ + V ++DFG
Sbjct: 128 PSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFG 184
Query: 118 LAKFHPKENDFVSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 169
LA+ + + + R + ++APE L R + + +SDV+ FG++L E+
Sbjct: 185 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 234
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 80/160 (50%), Gaps = 11/160 (6%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+E + E + + ++ + +V+++G C E LV E G L++++ E
Sbjct: 415 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE 473
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK-FHPKENDF 128
+H+V+ G ++YL + +H D+ N+LL +SDFGL+K EN +
Sbjct: 474 LVHQVSMG----MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526
Query: 129 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLE 168
+ + + + + APE I N+ S KSDV+ FG+++ E
Sbjct: 527 KAQTHGKWPVKWYAPECI--NYYKFSSKSDVWSFGVLMWE 564
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 20/173 (11%)
Query: 11 EFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+ I+E+ + I H N++ LLG C++ ++ E+ G+L ++ + G S+
Sbjct: 72 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 131
Query: 70 KLH------------EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG 117
H A A G+EYL CI H D+ N+L+ + V ++DFG
Sbjct: 132 PSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFG 188
Query: 118 LAKFHPKENDFVSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 169
LA+ + + + R + ++APE L R + + +SDV+ FG++L E+
Sbjct: 189 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 238
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 20/173 (11%)
Query: 11 EFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+ I+E+ + I H N++ LLG C++ ++ E+ G+L ++ + G S+
Sbjct: 79 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 138
Query: 70 KLH------------EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG 117
H A A G+EYL CI H D+ N+L+ + V ++DFG
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFG 195
Query: 118 LAKFHPKENDFVSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 169
LA+ + + + R + ++APE L R + + +SDV+ FG++L E+
Sbjct: 196 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 245
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 24/179 (13%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIF----PK 59
+S++S + E++ + H N+VQ LG SE + E +P GSL + P
Sbjct: 59 DSRYS-QPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPL 117
Query: 60 ESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLD-HNFVPNVSDFG- 117
+ Q+ + G++YLH D I+H DIK N+L++ ++ V +SDFG
Sbjct: 118 KDNEQTIGF-----YTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGT 169
Query: 118 ---LAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
LA +P F GT+ Y+APE+I + +D++ G ++EM G+
Sbjct: 170 SKRLAGINPCTETFT------GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 20/173 (11%)
Query: 11 EFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+ I+E+ + I H N++ LLG C++ ++ E+ G+L ++ + G S+
Sbjct: 71 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 130
Query: 70 KLH------------EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG 117
H A A G+EYL CI H D+ N+L+ + V ++DFG
Sbjct: 131 PSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFG 187
Query: 118 LAKFHPKENDFVSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 169
LA+ + + + R + ++APE L R + + +SDV+ FG++L E+
Sbjct: 188 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 237
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 15/155 (9%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
NE++ + +I H N+V L G L+ + + G L I K + + + +
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQ 124
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNIL---LDHNFVPNVSDFGLAKFHPKENDFVS 130
V ++YLH D+ I+H D+KP N+L LD + +SDFGL+K E+
Sbjct: 125 VLD----AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSV 174
Query: 131 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMV 165
+S GT GY+APE++++ S D + G++
Sbjct: 175 LSTACGTPGYVAPEVLAQK--PYSKAVDCWSIGVI 207
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 83/172 (48%), Gaps = 18/172 (10%)
Query: 10 EEFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESR------ 62
E ++E+ + + H N+V LLG C+ G ++ E+ G L + ++SR
Sbjct: 94 EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL-LNFLRRKSRVLETDP 152
Query: 63 -----GQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG 117
+ S L +S A G+ +L CI H D+ N+LL + V + DFG
Sbjct: 153 AFAIANSTASTRDLLHFSSQVAQGMAFL--ASKNCI-HRDVAARNVLLTNGHVAKIGDFG 209
Query: 118 LAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
LA+ +++++ R + ++APE I TV +SDV+ +G++L E+
Sbjct: 210 LARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTV--QSDVWSYGILLWEI 259
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 20/173 (11%)
Query: 11 EFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+ I+E+ + I H N++ LLG C++ ++ E+ G+L ++ + G S+
Sbjct: 120 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 179
Query: 70 KLH------------EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG 117
H A A G+EYL CI H D+ N+L+ + V ++DFG
Sbjct: 180 PSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFG 236
Query: 118 LAKFHPKENDFVSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 169
LA+ + + + R + ++APE L R + + +SDV+ FG++L E+
Sbjct: 237 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 286
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 82/166 (49%), Gaps = 11/166 (6%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQS----- 65
EF+NE S + +VV+LLG S+G +V E M +G L ++ ++
Sbjct: 67 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 126
Query: 66 -CSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPK 124
+ +++ ++A+ A G+ YL+ +H ++ N ++ H+F + DFG+ + +
Sbjct: 127 PPTLQEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE 183
Query: 125 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
+ + + ++APE S G + SD++ FG+VL E+T
Sbjct: 184 TDYYRKGGKGLLPVRWMAPE--SLKDGVFTTSSDMWSFGVVLWEIT 227
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 24/179 (13%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIF----PK 59
+S++S + E++ + H N+VQ LG SE + E +P GSL + P
Sbjct: 45 DSRYS-QPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPL 103
Query: 60 ESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLD-HNFVPNVSDFG- 117
+ Q+ + G++YLH D I+H DIK N+L++ ++ V +SDFG
Sbjct: 104 KDNEQTIGF-----YTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGT 155
Query: 118 ---LAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
LA +P F GT+ Y+APE+I + +D++ G ++EM G+
Sbjct: 156 SKRLAGINPCTETFT------GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 15/155 (9%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
NE++ + +I H N+V L G L+ + + G L I K + + + +
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQ 124
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNIL---LDHNFVPNVSDFGLAKFHPKENDFVS 130
V ++YLH D+ I+H D+KP N+L LD + +SDFGL+K E+
Sbjct: 125 VLD----AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSV 174
Query: 131 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMV 165
+S GT GY+APE++++ S D + G++
Sbjct: 175 LSTACGTPGYVAPEVLAQK--PYSKAVDCWSIGVI 207
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 82/166 (49%), Gaps = 11/166 (6%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQS----- 65
EF+NE S + +VV+LLG S+G +V E M +G L ++ ++
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 66 -CSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPK 124
+ +++ ++A+ A G+ YL+ +H ++ N ++ H+F + DFG+ + +
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 125 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
+ + + ++APE S G + SD++ FG+VL E+T
Sbjct: 183 TDYYRKGGKGLLPVRWMAPE--SLKDGVFTTSSDMWSFGVVLWEIT 226
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 83/172 (48%), Gaps = 18/172 (10%)
Query: 10 EEFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESR------ 62
E ++E+ + + H N+V LLG C+ G ++ E+ G L + ++SR
Sbjct: 94 EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL-LNFLRRKSRVLETDP 152
Query: 63 -----GQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG 117
+ S L +S A G+ +L CI H D+ N+LL + V + DFG
Sbjct: 153 AFAIANSTLSTRDLLHFSSQVAQGMAFL--ASKNCI-HRDVAARNVLLTNGHVAKIGDFG 209
Query: 118 LAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
LA+ +++++ R + ++APE I TV +SDV+ +G++L E+
Sbjct: 210 LARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTV--QSDVWSYGILLWEI 259
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 21/163 (12%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRA--LVYEFMPNGSLDRHIFPKESRGQSCSWEKL 71
E+ + ++H ++V+ G C + +++ LV E++P GSL R P+ G + +L
Sbjct: 59 REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL-RDYLPRHCVGLA----QL 113
Query: 72 HEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSI 131
A G+ YLH +H + N+LLD++ + + DFGLAK P+ +++ +
Sbjct: 114 LLFAQQICEGMAYLHAQH---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV 170
Query: 132 SATRGT-IGYIAPELISRNFGTVSCK----SDVYGFGMVLLEM 169
+ + + APE + CK SDV+ FG+ L E+
Sbjct: 171 REDGDSPVFWYAPECLK------ECKFYYASDVWSFGVTLYEL 207
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 21/163 (12%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRA--LVYEFMPNGSLDRHIFPKESRGQSCSWEKL 71
E+ + ++H ++V+ G C + +++ LV E++P GSL R P+ G + +L
Sbjct: 60 REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL-RDYLPRHCVGLA----QL 114
Query: 72 HEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSI 131
A G+ YLH +H + N+LLD++ + + DFGLAK P+ +++ +
Sbjct: 115 LLFAQQICEGMAYLHAQH---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV 171
Query: 132 SATRGT-IGYIAPELISRNFGTVSCK----SDVYGFGMVLLEM 169
+ + + APE + CK SDV+ FG+ L E+
Sbjct: 172 REDGDSPVFWYAPECLK------ECKFYYASDVWSFGVTLYEL 208
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 15/155 (9%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
NE++ + +I H N+V L G L+ + + G L I K + + + +
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQ 124
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNIL---LDHNFVPNVSDFGLAKFHPKENDFVS 130
V ++YLH D+ I+H D+KP N+L LD + +SDFGL+K E+
Sbjct: 125 VLD----AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSV 174
Query: 131 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMV 165
+S GT GY+APE++++ S D + G++
Sbjct: 175 LSTACGTPGYVAPEVLAQK--PYSKAVDCWSIGVI 207
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 85/173 (49%), Gaps = 20/173 (11%)
Query: 11 EFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+ ++E+ + I H N++ LLG C++ ++ E+ G+L ++ + G S++
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYD 145
Query: 70 ---------KLHEVASGT---AHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG 117
++ S T A G+EYL CI H D+ N+L+ N V ++DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFG 202
Query: 118 LAKFHPKENDFVSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 169
LA+ + + R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 203 LARDINNIDXXKKTTNGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 15/155 (9%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
NE++ + +I H N+V L G L+ + + G L I K + + + +
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQ 124
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNIL---LDHNFVPNVSDFGLAKFHPKENDFVS 130
V ++YLH D+ I+H D+KP N+L LD + +SDFGL+K E+
Sbjct: 125 VLD----AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSV 174
Query: 131 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMV 165
+S GT GY+APE++++ S D + G++
Sbjct: 175 LSTACGTPGYVAPEVLAQK--PYSKAVDCWSIGVI 207
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 78/159 (49%), Gaps = 13/159 (8%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRAL--VYEFMPNGSLDRHIFPKESRGQSCSWEKL 71
E+ + ++H ++++ G C + +L V E++P GSL R P+ S G + +L
Sbjct: 82 QEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSL-RDYLPRHSIGLA----QL 136
Query: 72 HEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSI 131
A G+ YLH +H D+ N+LLD++ + + DFGLAK P+ ++ +
Sbjct: 137 LLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRV 193
Query: 132 SATRGT-IGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ + + APE + SDV+ FG+ L E+
Sbjct: 194 REDGDSPVFWYAPECLKEY--KFYYASDVWSFGVTLYEL 230
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 84/181 (46%), Gaps = 27/181 (14%)
Query: 10 EEFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQS--- 65
E ++E+ + ++ H N+V LLG C+ L++E+ G L ++ K +
Sbjct: 93 EALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEI 152
Query: 66 ----------------CSWEKLHEVASGTAHGIEYLH-NGCDVCILHLDIKPHNILLDHN 108
++E L A A G+E+L C +H D+ N+L+ H
Sbjct: 153 EYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC----VHRDLAARNVLVTHG 208
Query: 109 FVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLE 168
V + DFGLA+ ++++V R + ++APE + G + KSDV+ +G++L E
Sbjct: 209 KVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFE--GIYTIKSDVWSYGILLWE 266
Query: 169 M 169
+
Sbjct: 267 I 267
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 20/173 (11%)
Query: 11 EFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG------ 63
+ I+E+ + I H N++ LLG C++ ++ E+ G+L ++ + G
Sbjct: 64 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYN 123
Query: 64 ------QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG 117
+ S + L A A G+EYL CI H D+ N+L+ + V ++DFG
Sbjct: 124 PSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFG 180
Query: 118 LAKFHPKENDFVSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 169
LA+ + + + R + ++APE L R + + +SDV+ FG++L E+
Sbjct: 181 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 230
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 20/173 (11%)
Query: 11 EFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG------ 63
+ I+E+ + I H N++ LLG C++ ++ E+ G+L ++ + G
Sbjct: 79 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYN 138
Query: 64 ------QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG 117
+ S + L A A G+EYL CI H D+ N+L+ + V ++DFG
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFG 195
Query: 118 LAKFHPKENDFVSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 169
LA+ + + + R + ++APE L R + + +SDV+ FG++L E+
Sbjct: 196 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 245
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 85/173 (49%), Gaps = 20/173 (11%)
Query: 11 EFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+ ++E+ + I H N++ LLG C++ ++ E+ G+L ++ + G S++
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 70 ---------KLHEVASGT---AHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG 117
++ S T A G+EYL CI H D+ N+L+ N V ++DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFG 202
Query: 118 LAKFHPKENDFVSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 169
LA+ + + R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 203 LARDINNIDXXKKTTNGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 15/168 (8%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLD---RHIFPKESRGQSC- 66
EF+NE S + + +VV+LLG S+G ++ E M G L R + P+
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 67 --SWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPK 124
S K+ ++A A G+ YL+ +H D+ N ++ +F + DFG+ +
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR-DIY 182
Query: 125 ENDFVSISATRG--TIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
E D+ +G + +++PE S G + SDV+ FG+VL E+
Sbjct: 183 ETDYYR-KGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 227
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 15/168 (8%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLD---RHIFPKESRGQSC- 66
EF+NE S + + +VV+LLG S+G ++ E M G L R + P+
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 67 --SWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPK 124
S K+ ++A A G+ YL+ +H D+ N ++ +F + DFG+ +
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR-DIY 176
Query: 125 ENDFVSISATRG--TIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
E D+ +G + +++PE S G + SDV+ FG+VL E+
Sbjct: 177 ETDYYR-KGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 221
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 15/168 (8%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLD---RHIFPKESRGQSC- 66
EF+NE S + + +VV+LLG S+G ++ E M G L R + P+
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 67 --SWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPK 124
S K+ ++A A G+ YL+ +H D+ N ++ +F + DFG+ +
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR-DIY 182
Query: 125 ENDFVSISATRG--TIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
E D+ +G + +++PE S G + SDV+ FG+VL E+
Sbjct: 183 ETDYYR-KGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 227
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 15/168 (8%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLD---RHIFPKESRGQSC- 66
EF+NE S + + +VV+LLG S+G ++ E M G L R + P+
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 67 --SWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPK 124
S K+ ++A A G+ YL+ +H D+ N ++ +F + DFG+ +
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR-DIY 183
Query: 125 ENDFVSISATRG--TIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
E D+ +G + +++PE S G + SDV+ FG+VL E+
Sbjct: 184 ETDYYR-KGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 228
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 15/168 (8%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLD---RHIFPKESRGQSC- 66
EF+NE S + + +VV+LLG S+G ++ E M G L R + P +
Sbjct: 64 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 123
Query: 67 --SWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPK 124
S K+ ++A A G+ YL+ +H D+ N ++ +F + DFG+ +
Sbjct: 124 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR-DIY 179
Query: 125 ENDFVSISATRG--TIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
E D+ +G + +++PE S G + SDV+ FG+VL E+
Sbjct: 180 ETDYYR-KGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 224
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 15/168 (8%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLD---RHIFPKESRG---Q 64
EF+NE S + + +VV+LLG S+G ++ E M G L R + P+
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 124
Query: 65 SCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPK 124
S K+ ++A A G+ YL+ +H D+ N ++ +F + DFG+ +
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR-DIY 180
Query: 125 ENDFVSISATRG--TIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
E D+ +G + +++PE S G + SDV+ FG+VL E+
Sbjct: 181 ETDYYR-KGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 225
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 15/168 (8%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLD---RHIFPKESRGQSC- 66
EF+NE S + + +VV+LLG S+G ++ E M G L R + P+
Sbjct: 96 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 155
Query: 67 --SWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPK 124
S K+ ++A A G+ YL+ +H D+ N ++ +F + DFG+ +
Sbjct: 156 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR-DIY 211
Query: 125 ENDFVSISATRG--TIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
E D+ +G + +++PE S G + SDV+ FG+VL E+
Sbjct: 212 ETDYYR-KGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 256
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 15/168 (8%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLD---RHIFPKESRG---Q 64
EF+NE S + + +VV+LLG S+G ++ E M G L R + P+
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 133
Query: 65 SCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPK 124
S K+ ++A A G+ YL+ +H D+ N ++ +F + DFG+ +
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR-DIY 189
Query: 125 ENDFVSISATRG--TIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
E D+ +G + +++PE S G + SDV+ FG+VL E+
Sbjct: 190 ETDYYR-KGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 234
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 15/168 (8%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLD---RHIFPKESRG---Q 64
EF+NE S + + +VV+LLG S+G ++ E M G L R + P +
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 133
Query: 65 SCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPK 124
S K+ ++A A G+ YL+ +H D+ N ++ +F + DFG+ +
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR-DIY 189
Query: 125 ENDFVSISATRG--TIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
E D+ +G + +++PE S G + SDV+ FG+VL E+
Sbjct: 190 ETDYYR-KGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 234
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 85/174 (48%), Gaps = 14/174 (8%)
Query: 3 ENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESR 62
+ S+ E+ E+ + + H N++++ + +V E G L I ++R
Sbjct: 58 DRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQAR 117
Query: 63 GQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLD----HNFVPNVSDFGL 118
G++ S + E+ + + Y H+ ++H D+KP NIL H+ + + DFGL
Sbjct: 118 GKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPI-KIIDFGL 173
Query: 119 AKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
A+ ++D S +A GT Y+APE+ R+ V+ K D++ G+V+ + G
Sbjct: 174 AELF--KSDEHSTNAA-GTALYMAPEVFKRD---VTFKCDIWSAGVVMYFLLTG 221
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLD---RHIFPKESRGQSC- 66
EF+NE S + + +VV+LLG S+G ++ E M G L R + P+
Sbjct: 59 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 118
Query: 67 --SWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPK 124
S K+ ++A A G+ YL+ +H D+ N ++ +F + DFG+ + +
Sbjct: 119 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE 175
Query: 125 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
+ + +++PE S G + SDV+ FG+VL E+
Sbjct: 176 TDXXRKGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 219
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 88/182 (48%), Gaps = 29/182 (15%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG------- 63
+ ++E + + +++H +V++L G CS+ L+ E+ GSL F +ESR
Sbjct: 72 DLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL--RGFLRESRKVGPGYLG 129
Query: 64 ---------------QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHN 108
++ + L A + G++YL ++ ++H D+ NIL+
Sbjct: 130 SGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEG 186
Query: 109 FVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLE 168
+SDFGL++ +E+ +V S R + ++A E + + T +SDV+ FG++L E
Sbjct: 187 RKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYT--TQSDVWSFGVLLWE 244
Query: 169 MT 170
+
Sbjct: 245 IV 246
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 93/193 (48%), Gaps = 28/193 (14%)
Query: 15 EVSTIGRIHHVNVVQL-LGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
E + ++H +V+L F +EG K L+ +F+ G L F + S+ + E +
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEG-KLYLILDFLRGGDL----FTRLSKEVMFTEEDVKF 130
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK----FHPKENDFV 129
+ A +++LH+ + I++ D+KP NILLD ++DFGL+K K F
Sbjct: 131 YLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC 187
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM-------TGGRRNSNLKATR 182
GT+ Y+APE+++R T S +D + FG+++ EM G R +
Sbjct: 188 ------GTVEYMAPEVVNRRGHTQS--ADWWSFGVLMFEMLTGTLPFQGKDRKETMTMIL 239
Query: 183 SSKAYFPSWVSDQ 195
+K P ++S +
Sbjct: 240 KAKLGMPQFLSPE 252
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 82/167 (49%), Gaps = 12/167 (7%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPK-ESR 62
K EE + E + ++ + +V+L+G C + LV E G L + + K E
Sbjct: 375 TEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEI 433
Query: 63 GQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK-F 121
S E LH+V+ G ++YL + +H ++ N+LL + +SDFGL+K
Sbjct: 434 PVSNVAELLHQVSMG----MKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKAL 486
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLE 168
++ + + SA + + + APE I NF S +SDV+ +G+ + E
Sbjct: 487 GADDSYYTARSAGKWPLKWYAPECI--NFRKFSSRSDVWSYGVTMWE 531
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 93/193 (48%), Gaps = 28/193 (14%)
Query: 15 EVSTIGRIHHVNVVQL-LGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
E + ++H VV+L F +EG K L+ +F+ G L F + S+ + E +
Sbjct: 80 ERDILADVNHPFVVKLHYAFQTEG-KLYLILDFLRGGDL----FTRLSKEVMFTEEDVKF 134
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK----FHPKENDFV 129
+ A G+++LH+ + I++ D+KP NILLD ++DFGL+K K F
Sbjct: 135 YLAELALGLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFC 191
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM-------TGGRRNSNLKATR 182
GT+ Y+APE+++R S +D + +G+++ EM G R +
Sbjct: 192 ------GTVEYMAPEVVNRQ--GHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLIL 243
Query: 183 SSKAYFPSWVSDQ 195
+K P ++S +
Sbjct: 244 KAKLGMPQFLSTE 256
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 93/193 (48%), Gaps = 28/193 (14%)
Query: 15 EVSTIGRIHHVNVVQL-LGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
E + ++H +V+L F +EG K L+ +F+ G L F + S+ + E +
Sbjct: 77 ERDILVEVNHPFIVKLHYAFQTEG-KLYLILDFLRGGDL----FTRLSKEVMFTEEDVKF 131
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK----FHPKENDFV 129
+ A +++LH+ + I++ D+KP NILLD ++DFGL+K K F
Sbjct: 132 YLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC 188
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM-------TGGRRNSNLKATR 182
GT+ Y+APE+++R T S +D + FG+++ EM G R +
Sbjct: 189 ------GTVEYMAPEVVNRRGHTQS--ADWWSFGVLMFEMLTGTLPFQGKDRKETMTMIL 240
Query: 183 SSKAYFPSWVSDQ 195
+K P ++S +
Sbjct: 241 KAKLGMPQFLSPE 253
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 84/183 (45%), Gaps = 22/183 (12%)
Query: 2 LENSKFSAEE-----FINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNG---SLD 53
L+ K +EE I E+S + + H N+V+L +K LV+EFM N +D
Sbjct: 35 LKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMD 94
Query: 54 RHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNV 113
RG + K + G+ + H ILH D+KP N+L++ +
Sbjct: 95 SRTVGNTPRGLELNLVKYFQWQ--LLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKL 149
Query: 114 SDFGLAK-FHPKENDFVSISATRGTIGYIAPELI--SRNFGTVSCKSDVYGFGMVLLEMT 170
DFGLA+ F N F S+ T+ Y AP+++ SR T S D++ G +L EM
Sbjct: 150 GDFGLARAFGIPVNTF---SSEVVTLWYRAPDVLMGSR---TYSTSIDIWSCGCILAEMI 203
Query: 171 GGR 173
G+
Sbjct: 204 TGK 206
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 9/159 (5%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
E+ + + H ++ QL +K +V E+ P G L +I ++ + + +
Sbjct: 57 TEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQ 116
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISA 133
+ S A Y+H+ H D+KP N+L D + DFGL PK N +
Sbjct: 117 IVSAVA----YVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCA-KPKGNKDYHLQT 168
Query: 134 TRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
G++ Y APELI + + ++DV+ G++L + G
Sbjct: 169 CCGSLAYAAPELI-QGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLD---RHIFPKESRG---Q 64
EF+NE S + + +VV+LLG S+G ++ E M G L R + P+
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 65 SCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPK 124
S K+ ++A A G+ YL+ +H D+ N ++ +F + DFG+ + +
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE 184
Query: 125 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
+ + +++PE S G + SDV+ FG+VL E+
Sbjct: 185 TDXXRKGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 228
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 10/161 (6%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
+NE + +++ VV L LV M G L HI+ G + +
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY 291
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSIS 132
A+ G+E LH I++ D+KP NILLD + +SD GLA P+ +I
Sbjct: 292 --AAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ---TIK 343
Query: 133 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
GT+GY+APE++ T S D + G +L EM G+
Sbjct: 344 GRVGTVGYMAPEVVKNERYTFS--PDWWALGCLLYEMIAGQ 382
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 10/161 (6%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
+NE + +++ VV L LV M G L HI+ G + +
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY 291
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSIS 132
A+ G+E LH I++ D+KP NILLD + +SD GLA P+ +I
Sbjct: 292 --AAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ---TIK 343
Query: 133 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
GT+GY+APE++ T S D + G +L EM G+
Sbjct: 344 GRVGTVGYMAPEVVKNERYTFS--PDWWALGCLLYEMIAGQ 382
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 11/158 (6%)
Query: 15 EVSTIGRIHHVNVVQLLGFCSE--GSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
E+ + ++H N+V+ G C+E G+ L+ EF+P+GSL ++ PK + ++
Sbjct: 73 EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNK--NKINLKQQL 129
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSIS 132
+ A G++YL + V H D+ N+L++ + DFGL K + + ++
Sbjct: 130 KYAVQICKGMDYLGSRQYV---HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVK 186
Query: 133 ATRGT-IGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
R + + + APE + ++ ++ SDV+ FG+ L E+
Sbjct: 187 DDRDSPVFWYAPECLMQSKFYIA--SDVWSFGVTLHEL 222
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 11/158 (6%)
Query: 15 EVSTIGRIHHVNVVQLLGFCSE--GSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
E+ + ++H N+V+ G C+E G+ L+ EF+P+GSL ++ PK + ++
Sbjct: 61 EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNK--NKINLKQQL 117
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSIS 132
+ A G++YL + V H D+ N+L++ + DFGL K + + ++
Sbjct: 118 KYAVQICKGMDYLGSRQYV---HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVK 174
Query: 133 ATRGT-IGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
R + + + APE + ++ ++ SDV+ FG+ L E+
Sbjct: 175 DDRDSPVFWYAPECLMQSKFYIA--SDVWSFGVTLHEL 210
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 85/173 (49%), Gaps = 20/173 (11%)
Query: 11 EFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+ ++E+ + I H N++ LLG C++ ++ + G+L ++ + G S++
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYD 145
Query: 70 ---------KLHEVASGT---AHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG 117
++ S T A G+EYL CI H D+ N+L+ N V ++DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFG 202
Query: 118 LAKFHPKENDFVSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 169
LA+ + + + R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 203 LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 93/193 (48%), Gaps = 28/193 (14%)
Query: 15 EVSTIGRIHHVNVVQL-LGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
E + ++H +V+L F +EG K L+ +F+ G L F + S+ + E +
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEG-KLYLILDFLRGGDL----FTRLSKEVMFTEEDVKF 130
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK----FHPKENDFV 129
+ A +++LH+ + I++ D+KP NILLD ++DFGL+K K F
Sbjct: 131 YLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC 187
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM-------TGGRRNSNLKATR 182
GT+ Y+APE+++R T S +D + FG+++ EM G R +
Sbjct: 188 ------GTVEYMAPEVVNRRGHTQS--ADWWSFGVLMFEMLTGTLPFQGKDRKETMTMIL 239
Query: 183 SSKAYFPSWVSDQ 195
+K P ++S +
Sbjct: 240 KAKLGMPQFLSPE 252
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 20/173 (11%)
Query: 11 EFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG------ 63
+ I+E+ + I H N++ LLG C++ ++ E+ G+L ++ + G
Sbjct: 79 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFN 138
Query: 64 ------QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG 117
+ S + L A A G+EYL CI H D+ N+L+ + V ++DFG
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFG 195
Query: 118 LAKFHPKENDFVSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 169
LA+ + + R + ++APE L R + + +SDV+ FG++L E+
Sbjct: 196 LARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 245
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 27/198 (13%)
Query: 12 FINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKL 71
++EV+ + ++ H N+++L F + LV E G L I ++ + + +
Sbjct: 51 LLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIM 110
Query: 72 HEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLD---HNFVPNVSDFGLAKFHPKENDF 128
+V SGT YLH I+H D+KP N+LL+ + + + DFGL+
Sbjct: 111 KQVLSGTT----YLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG-- 161
Query: 129 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT------GGRRNSN-LKAT 181
+ GT YIAPE++ + + K DV+ G++L + GG+ + LK
Sbjct: 162 -KMKERLGTAYYIAPEVLRKKYDE---KCDVWSCGVILYILLCGYPPFGGQTDQEILKRV 217
Query: 182 RSSKAYF--PSW--VSDQ 195
K F P W VSD+
Sbjct: 218 EKGKFSFDPPDWTQVSDE 235
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 14/153 (9%)
Query: 24 HVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIE 83
H N+V+L + LV E + G L I K+ ++ + + ++ S +H
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSH--- 121
Query: 84 YLHNGCDVCILHLDIKPHNILL---DHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
+H DV ++H D+KP N+L + N + DFG A+ P +N + T+ Y
Sbjct: 122 -MH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ--PLKTPCFTLHY 175
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APEL+++N SC D++ G++L M G+
Sbjct: 176 AAPELLNQNGYDESC--DLWSLGVILYTMLSGQ 206
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 81/165 (49%), Gaps = 19/165 (11%)
Query: 13 INEVSTIGRIH---HVNVVQLLGFCSEGS-----KRALVYEFMPNGSLDRHIFPKESRGQ 64
+ EV+ + R+ H NVV+L+ C+ K LV+E + D + ++
Sbjct: 59 VREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV---DQDLRTYLDKAPPP 115
Query: 65 SCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPK 124
E + ++ G+++LH C I+H D+KP NIL+ ++DFGLA+ +
Sbjct: 116 GLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSY 172
Query: 125 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ ++++ T+ Y APE++ ++ T + D++ G + EM
Sbjct: 173 Q---MALTPVVVTLWYRAPEVLLQS--TYATPVDMWSVGCIFAEM 212
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 20/167 (11%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E NEV + H NVV++ G + ++ EF+ G+L + + R + E
Sbjct: 87 ELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIV--SQVR---LNEE 141
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG----LAKFHPKE 125
++ V + YLH ++H DIK +ILL + +SDFG ++K PK
Sbjct: 142 QIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR 198
Query: 126 NDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
V GT ++APE+ISR+ + + D++ G++++EM G
Sbjct: 199 KXLV------GTPYWMAPEVISRSL--YATEVDIWSLGIMVIEMVDG 237
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLD---RHIFPKESRGQSC- 66
EF+NE S + + +VV+LLG S+G ++ E M G L R + P+
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 67 --SWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPK 124
S K+ ++A A G+ YL+ +H D+ N + +F + DFG+ +
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTR-DIY 176
Query: 125 ENDFVSISATRG--TIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT 170
E D+ +G + +++PE S G + SDV+ FG+VL E+
Sbjct: 177 ETDYYR-KGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 221
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 103/229 (44%), Gaps = 30/229 (13%)
Query: 3 ENSKFSA-EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
EN+ A +E ++E + + V +LLG C + + LV + MP G L H+ +E+
Sbjct: 56 ENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHV--REN 112
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
RG+ S + L+ A G+ YL DV ++H D+ N+L+ ++DFGLA+
Sbjct: 113 RGRLGSQDLLNWCMQ-IAKGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARL 168
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLE-MTGGRRNSNLKA 180
+ + I ++A E I R + +SDV+ +G+ + E MT G + +
Sbjct: 169 LDIDETEYHADGGKVPIKWMALESILRR--RFTHQSDVWSYGVTVWELMTFGAKPYDGIP 226
Query: 181 TRSSKAYFPSWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVK 229
R + D L KG E + +C I ++ I VK
Sbjct: 227 ARE--------IPDLLEKG-----------ERLPQPPICTIDVYMIMVK 256
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 81/165 (49%), Gaps = 19/165 (11%)
Query: 13 INEVSTIGRIH---HVNVVQLLGFCSEGS-----KRALVYEFMPNGSLDRHIFPKESRGQ 64
+ EV+ + R+ H NVV+L+ C+ K LV+E + D + ++
Sbjct: 51 VREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV---DQDLRTYLDKAPPP 107
Query: 65 SCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPK 124
E + ++ G+++LH C I+H D+KP NIL+ ++DFGLA+ +
Sbjct: 108 GLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSY 164
Query: 125 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ ++++ T+ Y APE++ ++ T + D++ G + EM
Sbjct: 165 Q---MALAPVVVTLWYRAPEVLLQS--TYATPVDMWSVGCIFAEM 204
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 14/151 (9%)
Query: 22 IHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHG 81
+ H ++++ G + + ++ +++ G L F + Q A+
Sbjct: 63 VTHPFIIRMWGTFQDAQQIFMIMDYIEGGEL----FSLLRKSQRFPNPVAKFYAAEVCLA 118
Query: 82 IEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGYI 141
+EYLH+ I++ D+KP NILLD N ++DFG AK+ P + GT YI
Sbjct: 119 LEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLC-----GTPDYI 170
Query: 142 APELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
APE++S S D + FG+++ EM G
Sbjct: 171 APEVVSTKPYNKSI--DWWSFGILIYEMLAG 199
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 27/198 (13%)
Query: 12 FINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKL 71
++EV+ + ++ H N+++L F + LV E G L I ++ + + +
Sbjct: 68 LLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIM 127
Query: 72 HEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLD---HNFVPNVSDFGLAKFHPKENDF 128
+V SGT YLH I+H D+KP N+LL+ + + + DFGL+
Sbjct: 128 KQVLSGTT----YLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG-- 178
Query: 129 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMT------GGRRNSN-LKAT 181
+ GT YIAPE++ + + K DV+ G++L + GG+ + LK
Sbjct: 179 -KMKERLGTAYYIAPEVLRKKYDE---KCDVWSCGVILYILLCGYPPFGGQTDQEILKRV 234
Query: 182 RSSKAYF--PSW--VSDQ 195
K F P W VSD+
Sbjct: 235 EKGKFSFDPPDWTQVSDE 252
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 85/173 (49%), Gaps = 20/173 (11%)
Query: 11 EFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+ ++E+ + I H N++ LLG C++ ++ + G+L ++ + G S++
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYD 145
Query: 70 ---------KLHEVASGT---AHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG 117
++ S T A G+EYL CI H D+ N+L+ N V ++DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFG 202
Query: 118 LAKFHPKENDFVSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 169
LA+ + + + R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 203 LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 87/182 (47%), Gaps = 29/182 (15%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG------- 63
+ ++E + + +++H +V++L G CS+ L+ E+ GSL F +ESR
Sbjct: 72 DLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL--RGFLRESRKVGPGYLG 129
Query: 64 ---------------QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHN 108
++ + L A + G++YL ++ ++H D+ NIL+
Sbjct: 130 SGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEG 186
Query: 109 FVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLE 168
+SDFGL++ +E+ V S R + ++A E + + T +SDV+ FG++L E
Sbjct: 187 RKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYT--TQSDVWSFGVLLWE 244
Query: 169 MT 170
+
Sbjct: 245 IV 246
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 84/185 (45%), Gaps = 31/185 (16%)
Query: 10 EEFINE--VSTIGRIHHVNVVQLL----GFCSEGS-KRALVYEFMPNGSLDRHIFPKESR 62
+ FINE + + + H N+ + + ++G + LV E+ PNGSL +++
Sbjct: 50 QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL-----S 104
Query: 63 GQSCSWEKLHEVASGTAHGIEYLH------NGCDVCILHLDIKPHNILLDHNFVPNVSDF 116
+ W +A G+ YLH + I H D+ N+L+ ++ +SDF
Sbjct: 105 LHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDF 164
Query: 117 GLAK-------FHPKENDFVSISATRGTIGYIAPELIS-----RNFGTVSCKSDVYGFGM 164
GL+ P E D +IS GTI Y+APE++ R+ + + D+Y G+
Sbjct: 165 GLSMRLTGNRLVRPGEEDNAAISEV-GTIRYMAPEVLEGAVNLRDXESALKQVDMYALGL 223
Query: 165 VLLEM 169
+ E+
Sbjct: 224 IYWEI 228
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 13 INEVSTIGRIH---HVNVVQLLGFCSEGS-----KRALVYEFMPNGSLDRHIFPKESRGQ 64
+ EV+ + R+ H NVV+L+ C+ K LV+E + D + ++
Sbjct: 51 VREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV---DQDLRTYLDKAPPP 107
Query: 65 SCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPK 124
E + ++ G+++LH C I+H D+KP NIL+ ++DFGLA+ +
Sbjct: 108 GLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSY 164
Query: 125 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ +++ T+ Y APE++ ++ T + D++ G + EM
Sbjct: 165 Q---MALDPVVVTLWYRAPEVLLQS--TYATPVDMWSVGCIFAEM 204
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 13 INEVSTIGRIH---HVNVVQLLGFCSEGS-----KRALVYEFMPNGSLDRHIFPKESRGQ 64
+ EV+ + R+ H NVV+L+ C+ K LV+E + D + ++
Sbjct: 51 VREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV---DQDLRTYLDKAPPP 107
Query: 65 SCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPK 124
E + ++ G+++LH C I+H D+KP NIL+ ++DFGLA+ +
Sbjct: 108 GLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSY 164
Query: 125 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ + T+ Y APE++ ++ T + D++ G + EM
Sbjct: 165 QMALFPVVV---TLWYRAPEVLLQS--TYATPVDMWSVGCIFAEM 204
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 87/182 (47%), Gaps = 29/182 (15%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG------- 63
+ ++E + + +++H +V++L G CS+ L+ E+ GSL F +ESR
Sbjct: 72 DLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL--RGFLRESRKVGPGYLG 129
Query: 64 ---------------QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHN 108
++ + L A + G++YL ++ ++H D+ NIL+
Sbjct: 130 SGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEG 186
Query: 109 FVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLE 168
+SDFGL++ +E+ V S R + ++A E + + T +SDV+ FG++L E
Sbjct: 187 RKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYT--TQSDVWSFGVLLWE 244
Query: 169 MT 170
+
Sbjct: 245 IV 246
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 81/181 (44%), Gaps = 27/181 (14%)
Query: 10 EEFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEFMPNGSL---------------- 52
E ++E+ + + H N+V LLG C+ G ++ E+ G L
Sbjct: 79 EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSL 138
Query: 53 ----DRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHN 108
D KE G+ L +S A G+ +L CI H D+ N+LL +
Sbjct: 139 APGQDPEGLDKED-GRPLELRDLLHFSSQVAQGMAFL--ASKNCI-HRDVAARNVLLTNG 194
Query: 109 FVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLE 168
V + DFGLA+ +++++ R + ++APE I TV +SDV+ +G++L E
Sbjct: 195 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTV--QSDVWSYGILLWE 252
Query: 169 M 169
+
Sbjct: 253 I 253
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 16/168 (9%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
S + + EV+ + + H N+++L F + LV E G L I + + +
Sbjct: 79 SNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDA 138
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILL---DHNFVPNVSDFGLAKFHPK 124
+ +V SG + YLH I+H D+KP N+LL + + + + DFGL+
Sbjct: 139 AVIIKQVLSG----VTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN 191
Query: 125 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
+ + GT YIAPE++ + + K DV+ G++L + G
Sbjct: 192 QK---KMKERLGTAYYIAPEVLRKKYDE---KCDVWSIGVILFILLAG 233
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 11/165 (6%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLD---RHIFPKESRGQSCS 67
+F+ E I +++H N+V+ +G + R ++ E M G L R P+ S+ S +
Sbjct: 80 DFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 139
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLD---HNFVPNVSDFGLAKFHPK 124
L VA A G +YL +H DI N LL V + DFG+A+ +
Sbjct: 140 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 196
Query: 125 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ + + ++ PE G + K+D + FG++L E+
Sbjct: 197 ASYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFGVLLWEI 239
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 91/186 (48%), Gaps = 28/186 (15%)
Query: 1 MLENSKFSAEEFINEVSTIGRIHHVNVVQLLG----------FCSEGSKRA------LVY 44
+++ K++ E+ EV + ++ HVN+V G S+ S R+ +
Sbjct: 40 VIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQM 99
Query: 45 EFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNIL 104
EF G+L++ I ++ RG+ E+ G++Y+H+ +++ D+KP NI
Sbjct: 100 EFCDKGTLEQWI--EKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIF 154
Query: 105 LDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFG 163
L + DFGL +ND ++GT+ Y++PE I S+++G + D+Y G
Sbjct: 155 LVDTKQVKIGDFGLVT--SLKNDGKR-XRSKGTLRYMSPEQISSQDYGK---EVDLYALG 208
Query: 164 MVLLEM 169
++L E+
Sbjct: 209 LILAEL 214
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 15/155 (9%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
NE+S + ++HH ++ L + + L+ EF+ G L I ++ + E
Sbjct: 97 NEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEA------E 150
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVS--DFGLA-KFHPKENDFVS 130
V + E L + + I+HLDIKP NI+ + +V DFGLA K +P E
Sbjct: 151 VINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE----I 206
Query: 131 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMV 165
+ T T + APE++ R V +D++ G++
Sbjct: 207 VKVTTATAEFAAPEIVDRE--PVGFYTDMWAIGVL 239
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 11/165 (6%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLD---RHIFPKESRGQSCS 67
+F+ E I +++H N+V+ +G + R ++ E M G L R P+ S+ S +
Sbjct: 94 DFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 153
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLD---HNFVPNVSDFGLAKFHPK 124
L VA A G +YL +H DI N LL V + DFG+A+ +
Sbjct: 154 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 210
Query: 125 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ + + ++ PE G + K+D + FG++L E+
Sbjct: 211 ASYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFGVLLWEI 253
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 15/134 (11%)
Query: 43 VYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHN 102
+Y+F+ +L+ H+ + + +C LH +E I H D K N
Sbjct: 93 LYDFLQRQTLEPHLALRLAVSAACGLAHLH---------VEIFGTQGKPAIAHRDFKSRN 143
Query: 103 ILLDHNFVPNVSDFGLAKFHPKENDFVSI--SATRGTIGYIAPELISRNFGTVSCKS--- 157
+L+ N ++D GLA H + +D++ I + GT Y+APE++ T +S
Sbjct: 144 VLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKW 203
Query: 158 -DVYGFGMVLLEMT 170
D++ FG+VL E+
Sbjct: 204 TDIWAFGLVLWEIA 217
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 20/174 (11%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG 63
K E + EV + ++ H N+++L F + LV E G L I ++
Sbjct: 71 KQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFS 130
Query: 64 QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILL-----DHNFVPNVSDFGL 118
+ + + +V SG I Y+H I+H D+KP N+LL D N + DFGL
Sbjct: 131 EVDAARIIRQVLSG----ITYMHKNK---IVHRDLKPENLLLESKSKDANI--RIIDFGL 181
Query: 119 AKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
+ + GT YIAPE++ GT K DV+ G++L + G
Sbjct: 182 STHFEASK---KMKDKIGTAYYIAPEVLH---GTYDEKCDVWSTGVILYILLSG 229
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 21/164 (12%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
EV + H N+++L G+ + ++ L+ E+ P G++ R + Q S K E
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDE 107
Query: 74 VASGTAHGIEYLHNGCDVC----ILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
TA I L N C ++H DIKP N+LL ++DFG + P
Sbjct: 108 --QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-- 163
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+A GT+ Y+ PE+I K D++ G++ E G+
Sbjct: 164 --AALCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGK 203
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 83/178 (46%), Gaps = 18/178 (10%)
Query: 3 ENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRH------- 55
+ S + ++F E + + H ++V+ G C EG +V+E+M +G L++
Sbjct: 53 DASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPD 112
Query: 56 --IFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNV 113
+ + + + ++ +A A G+ YL +H D+ N L+ N + +
Sbjct: 113 AVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKI 169
Query: 114 SDFGLAKFHPKENDFVSISA-TRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 169
DFG+++ D+ + T I ++ PE ++ R F T +SDV+ G+VL E+
Sbjct: 170 GDFGMSR-DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTT---ESDVWSLGVVLWEI 223
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 20/174 (11%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG 63
K E + EV + ++ H N+++L F + LV E G L I ++
Sbjct: 65 KQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFS 124
Query: 64 QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILL-----DHNFVPNVSDFGL 118
+ + + +V SG I Y+H I+H D+KP N+LL D N + DFGL
Sbjct: 125 EVDAARIIRQVLSG----ITYMHKNK---IVHRDLKPENLLLESKSKDANI--RIIDFGL 175
Query: 119 AKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
+ + GT YIAPE++ GT K DV+ G++L + G
Sbjct: 176 STHFEASK---KMKDKIGTAYYIAPEVLH---GTYDEKCDVWSTGVILYILLSG 223
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 3 ENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDR-HIFPKES 61
++ K + + E+ + ++ H N+V LL C + + LV+EF+ + LD +FP
Sbjct: 62 DDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFP--- 118
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
++ + + +GI + H+ I+H DIKP NIL+ + V + DFG A+
Sbjct: 119 --NGLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFART 173
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
+ T Y APEL+ + DV+ G ++ EM G
Sbjct: 174 LAAPGEVYDDEV--ATRWYRAPELLVGDV-KYGKAVDVWAIGCLVTEMFMG 221
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+E I E+S + + +VV+ G + + +V E+ GS+ I R ++ + +
Sbjct: 69 QEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDII---RLRNKTLTED 125
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
++ + T G+EYLH + +H DIK NILL+ ++DFG+A
Sbjct: 126 EIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVA------GQLT 176
Query: 130 SISATR----GTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
A R GT ++APE+I + G +C +D++ G+ +EM G+
Sbjct: 177 DXMAKRNXVIGTPFWMAPEVI-QEIG-YNCVADIWSLGITAIEMAEGK 222
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 87/168 (51%), Gaps = 16/168 (9%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFC--SEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSW 68
+F+ E + H NV+ LLG C SEGS +V +M +G L R+ E+ +
Sbjct: 75 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV-- 130
Query: 69 EKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK-FHPKEND 127
+ L A G+++L + +H D+ N +LD F V+DFGLA+ + KE D
Sbjct: 131 KDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD 187
Query: 128 FV-SISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLE-MTGG 172
V + + + + ++A E L ++ F T KSDV+ FG++L E MT G
Sbjct: 188 SVHNKTGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWELMTRG 232
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 21/164 (12%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
EV + H N+++L G+ + ++ L+ E+ P G++ R + Q S K E
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDE 110
Query: 74 VASGTAHGIEYLHNGCDVC----ILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
TA I L N C ++H DIKP N+LL ++DFG + P
Sbjct: 111 --QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-- 166
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+A GT+ Y+ PE+I K D++ G++ E G+
Sbjct: 167 --AALCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGK 206
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 87/168 (51%), Gaps = 16/168 (9%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFC--SEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSW 68
+F+ E + H NV+ LLG C SEGS +V +M +G L R+ E+ +
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV-- 132
Query: 69 EKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK-FHPKEND 127
+ L A G+++L + +H D+ N +LD F V+DFGLA+ + KE D
Sbjct: 133 KDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD 189
Query: 128 FV-SISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLE-MTGG 172
V + + + + ++A E L ++ F T KSDV+ FG++L E MT G
Sbjct: 190 SVHNKTGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWELMTRG 234
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 21/163 (12%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
EV + H N+++L G+ + ++ L+ E+ P G++ R + K SR
Sbjct: 61 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSRFDE-------- 111
Query: 74 VASGTAHGIEYLHNGCDVC----ILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
TA I L N C ++H DIKP N+LL N ++DFG + P
Sbjct: 112 --QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR-- 167
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
+ GT+ Y+ PE+I K D++ G++ E G
Sbjct: 168 --TTLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVG 206
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 29/189 (15%)
Query: 3 ENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLD---RHIFPK 59
E S +F E + + + N+V+LLG C+ G L++E+M G L+ R + P
Sbjct: 88 EASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPH 147
Query: 60 ----------ESRGQ---------SCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKP 100
+R + SC+ E+L +A A G+ YL + +H D+
Sbjct: 148 TVCSLSHSDLSTRARVSSPGPPPLSCA-EQLC-IARQVAAGMAYLS---ERKFVHRDLAT 202
Query: 101 HNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVY 160
N L+ N V ++DFGL++ + + + I ++ PE I N T +SDV+
Sbjct: 203 RNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTT--ESDVW 260
Query: 161 GFGMVLLEM 169
+G+VL E+
Sbjct: 261 AYGVVLWEI 269
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 20/174 (11%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG 63
K E + EV + ++ H N+++L F + LV E G L I ++
Sbjct: 88 KQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFS 147
Query: 64 QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILL-----DHNFVPNVSDFGL 118
+ + + +V SG I Y+H I+H D+KP N+LL D N + DFGL
Sbjct: 148 EVDAARIIRQVLSG----ITYMHKNK---IVHRDLKPENLLLESKSKDANI--RIIDFGL 198
Query: 119 AKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
+ + GT YIAPE++ GT K DV+ G++L + G
Sbjct: 199 STHFEASK---KMKDKIGTAYYIAPEVLH---GTYDEKCDVWSTGVILYILLSG 246
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 99/229 (43%), Gaps = 23/229 (10%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E+F++E + + H ++V+L+G E ++ E P G L ++ E S
Sbjct: 58 EKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYL---ERNKNSLKVL 113
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
L + + YL + + +H DI NIL+ + DFGL+++ E D+
Sbjct: 114 TLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE-DYY 169
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKATRSSKAYFP 189
S TR I +++PE I NF + SDV+ F + + E+ + + +F
Sbjct: 170 KASVTRLPIKWMSPESI--NFRRFTTASDVWMFAVCMWEIL----------SFGKQPFF- 216
Query: 190 SWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVKPADRPSMTK 238
W+ ++ + G LE + + L + C P+DRP T+
Sbjct: 217 -WLENK-DVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTE 263
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 87/168 (51%), Gaps = 16/168 (9%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFC--SEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSW 68
+F+ E + H NV+ LLG C SEGS +V +M +G L R+ E+ +
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV-- 132
Query: 69 EKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK-FHPKEND 127
+ L A G+++L + +H D+ N +LD F V+DFGLA+ + KE D
Sbjct: 133 KDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD 189
Query: 128 FV-SISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLE-MTGG 172
V + + + + ++A E L ++ F T KSDV+ FG++L E MT G
Sbjct: 190 SVHNKTGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWELMTRG 234
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 87/168 (51%), Gaps = 16/168 (9%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFC--SEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSW 68
+F+ E + H NV+ LLG C SEGS +V +M +G L R+ E+ +
Sbjct: 78 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV-- 133
Query: 69 EKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK-FHPKEND 127
+ L A G+++L + +H D+ N +LD F V+DFGLA+ + KE D
Sbjct: 134 KDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD 190
Query: 128 FV-SISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLE-MTGG 172
V + + + + ++A E L ++ F T KSDV+ FG++L E MT G
Sbjct: 191 SVHNKTGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWELMTRG 235
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 99/229 (43%), Gaps = 23/229 (10%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E+F++E + + H ++V+L+G E ++ E P G L ++ E S
Sbjct: 54 EKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYL---ERNKNSLKVL 109
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
L + + YL + + +H DI NIL+ + DFGL+++ E D+
Sbjct: 110 TLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE-DYY 165
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKATRSSKAYFP 189
S TR I +++PE S NF + SDV+ F + + E+ + + +F
Sbjct: 166 KASVTRLPIKWMSPE--SINFRRFTTASDVWMFAVCMWEIL----------SFGKQPFF- 212
Query: 190 SWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVKPADRPSMTK 238
W+ ++ + G LE + + L + C P+DRP T+
Sbjct: 213 -WLENK-DVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTE 259
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 21/164 (12%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
EV + H N+++L G+ + ++ L+ E+ P G++ R + Q S K E
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL-------QKLS--KFDE 107
Query: 74 VASGTAHGIEYLHNGCDVC----ILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
TA I L N C ++H DIKP N+LL ++DFG + P
Sbjct: 108 --QRTATYITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-- 163
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+A GT+ Y+ PE+I K D++ G++ E G+
Sbjct: 164 --AALCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGK 203
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFC--SEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSW 68
+F+ E + H NV+ LLG C SEGS +V +M +G L R+ E+ +
Sbjct: 76 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV-- 131
Query: 69 EKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK-FHPKEND 127
+ L A G++YL + +H D+ N +LD F V+DFGLA+ + KE
Sbjct: 132 KDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXX 188
Query: 128 FV-SISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLE-MTGG 172
V + + + + ++A E L ++ F T KSDV+ FG++L E MT G
Sbjct: 189 SVHNKTGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWELMTRG 233
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 64 QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHP 123
+ + E L + A G+E+L + CI H D+ NILL N V + DFGLA+
Sbjct: 194 EPITMEDLISYSFQVARGMEFLSS--RKCI-HRDLAARNILLSENNVVKICDFGLARDIY 250
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTV-SCKSDVYGFGMVLLEM 169
K D+V TR + ++APE I F + S KSDV+ +G++L E+
Sbjct: 251 KNPDYVRKGDTRLPLKWMAPESI---FDKIYSTKSDVWSYGVLLWEI 294
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 23 HHVNVVQLLGFCS-EGSKRALVYEFMPNGSLDRHI 56
HH+NVV LLG C+ +G ++ E+ G+L ++
Sbjct: 89 HHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYL 123
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 99/229 (43%), Gaps = 23/229 (10%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E+F++E + + H ++V+L+G E ++ E P G L ++ E S
Sbjct: 70 EKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYL---ERNKNSLKVL 125
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
L + + YL + + +H DI NIL+ + DFGL+++ E D+
Sbjct: 126 TLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE-DYY 181
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKATRSSKAYFP 189
S TR I +++PE I NF + SDV+ F + + E+ + + +F
Sbjct: 182 KASVTRLPIKWMSPESI--NFRRFTTASDVWMFAVCMWEIL----------SFGKQPFF- 228
Query: 190 SWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVKPADRPSMTK 238
W+ ++ + G LE + + L + C P+DRP T+
Sbjct: 229 -WLENK-DVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTE 275
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 85/169 (50%), Gaps = 18/169 (10%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFC--SEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSW 68
+F+ E + H NV+ LLG C SEGS +V +M +G L R+ E+ +
Sbjct: 69 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV-- 124
Query: 69 EKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDF 128
+ L A G++YL + V H D+ N +LD F V+DFGLA+ + ++
Sbjct: 125 KDLIGFGLQVAKGMKYLASKKFV---HRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEY 180
Query: 129 VSISATRGT---IGYIAPE-LISRNFGTVSCKSDVYGFGMVLLE-MTGG 172
S+ G + ++A E L ++ F T KSDV+ FG++L E MT G
Sbjct: 181 YSVHNKTGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWELMTRG 226
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 85/164 (51%), Gaps = 15/164 (9%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFC--SEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSW 68
+F+ E + H NV+ LLG C SEGS +V +M +G L R+ E+ +
Sbjct: 136 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV-- 191
Query: 69 EKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK-FHPKEND 127
+ L A G+++L + +H D+ N +LD F V+DFGLA+ + KE D
Sbjct: 192 KDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD 248
Query: 128 FV-SISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 169
V + + + + ++A E L ++ F T KSDV+ FG++L E+
Sbjct: 249 SVHNKTGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWEL 289
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 20/174 (11%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG 63
K E + EV + ++ H N+++L F + LV E G L I ++
Sbjct: 89 KQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFS 148
Query: 64 QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILL-----DHNFVPNVSDFGL 118
+ + + +V SG I Y+H I+H D+KP N+LL D N + DFGL
Sbjct: 149 EVDAARIIRQVLSG----ITYMHKNK---IVHRDLKPENLLLESKSKDANI--RIIDFGL 199
Query: 119 AKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
+ + GT YIAPE++ GT K DV+ G++L + G
Sbjct: 200 STHFEASK---KMKDKIGTAYYIAPEVLH---GTYDEKCDVWSTGVILYILLSG 247
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 85/169 (50%), Gaps = 18/169 (10%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFC--SEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSW 68
+F+ E + H NV+ LLG C SEGS +V +M +G L R+ E+ +
Sbjct: 96 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV-- 151
Query: 69 EKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDF 128
+ L A G++YL + V H D+ N +LD F V+DFGLA+ + ++
Sbjct: 152 KDLIGFGLQVAKGMKYLASKKFV---HRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEY 207
Query: 129 VSISATRGT---IGYIAPE-LISRNFGTVSCKSDVYGFGMVLLE-MTGG 172
S+ G + ++A E L ++ F T KSDV+ FG++L E MT G
Sbjct: 208 YSVHNKTGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWELMTRG 253
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 22/168 (13%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E NEV + H NVV++ G + +V EF+ G+L + + E
Sbjct: 73 ELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-----THTRMNEE 127
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG----LAKFHPKE 125
++ V + LH ++H DIK +ILL H+ +SDFG ++K P+
Sbjct: 128 QIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 184
Query: 126 NDFVSISATRGTIGYIAPELISR-NFGTVSCKSDVYGFGMVLLEMTGG 172
V GT ++APELISR +G + D++ G++++EM G
Sbjct: 185 KXLV------GTPYWMAPELISRLPYGP---EVDIWSLGIMVIEMVDG 223
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 18/169 (10%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFC--SEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSW 68
+F+ E + H NV+ LLG C SEGS +V +M +G L R+ E+ +
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV-- 132
Query: 69 EKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDF 128
+ L A G++YL + +H D+ N +LD F V+DFGLA+ + ++
Sbjct: 133 KDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEY 188
Query: 129 VSISATRGT---IGYIAPE-LISRNFGTVSCKSDVYGFGMVLLE-MTGG 172
S+ G + ++A E L ++ F T KSDV+ FG++L E MT G
Sbjct: 189 YSVHNKTGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWELMTRG 234
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 87/168 (51%), Gaps = 16/168 (9%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFC--SEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSW 68
+F+ E + H NV+ LLG C SEGS +V +M +G L R+ E+ +
Sbjct: 82 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV-- 137
Query: 69 EKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK-FHPKEND 127
+ L A G+++L + +H D+ N +LD F V+DFGLA+ + KE D
Sbjct: 138 KDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD 194
Query: 128 FV-SISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLE-MTGG 172
V + + + + ++A E L ++ F T KSDV+ FG++L E MT G
Sbjct: 195 SVHNKTGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWELMTRG 239
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 22/168 (13%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E NEV + H NVV++ G + +V EF+ G+L + + E
Sbjct: 62 ELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-----THTRMNEE 116
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG----LAKFHPKE 125
++ V + LH ++H DIK +ILL H+ +SDFG ++K P+
Sbjct: 117 QIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 173
Query: 126 NDFVSISATRGTIGYIAPELISR-NFGTVSCKSDVYGFGMVLLEMTGG 172
V GT ++APELISR +G + D++ G++++EM G
Sbjct: 174 KXLV------GTPYWMAPELISRLPYGP---EVDIWSLGIMVIEMVDG 212
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 22/168 (13%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E NEV + H NVV++ G + +V EF+ G+L + + E
Sbjct: 71 ELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-----THTRMNEE 125
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG----LAKFHPKE 125
++ V + LH ++H DIK +ILL H+ +SDFG ++K P+
Sbjct: 126 QIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 182
Query: 126 NDFVSISATRGTIGYIAPELISR-NFGTVSCKSDVYGFGMVLLEMTGG 172
V GT ++APELISR +G + D++ G++++EM G
Sbjct: 183 KXLV------GTPYWMAPELISRLPYGP---EVDIWSLGIMVIEMVDG 221
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 18/169 (10%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFC--SEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSW 68
+F+ E + H NV+ LLG C SEGS +V +M +G L R+ E+ +
Sbjct: 74 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV-- 129
Query: 69 EKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDF 128
+ L A G++YL + +H D+ N +LD F V+DFGLA+ + ++
Sbjct: 130 KDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEY 185
Query: 129 VSISATRGT---IGYIAPE-LISRNFGTVSCKSDVYGFGMVLLE-MTGG 172
S+ G + ++A E L ++ F T KSDV+ FG++L E MT G
Sbjct: 186 YSVHNKTGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWELMTRG 231
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 18/169 (10%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFC--SEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSW 68
+F+ E + H NV+ LLG C SEGS +V +M +G L R+ E+ +
Sbjct: 95 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV-- 150
Query: 69 EKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDF 128
+ L A G++YL + +H D+ N +LD F V+DFGLA+ + ++
Sbjct: 151 KDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEY 206
Query: 129 VSISATRGT---IGYIAPE-LISRNFGTVSCKSDVYGFGMVLLE-MTGG 172
S+ G + ++A E L ++ F T KSDV+ FG++L E MT G
Sbjct: 207 YSVHNKTGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWELMTRG 252
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 17/172 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
EEF +E R+ H NVV LLG ++ ++++ + +G L + + S +
Sbjct: 74 EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTD 133
Query: 70 KLHEVASG------------TAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG 117
V S A G+EYL + ++H D+ N+L+ +SD G
Sbjct: 134 DDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLG 190
Query: 118 LAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
L + + + + + I ++APE I +G S SD++ +G+VL E+
Sbjct: 191 LFREVYAADYYKLLGNSLLPIRWMAPEAIM--YGKFSIDSDIWSYGVVLWEV 240
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 18/169 (10%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFC--SEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSW 68
+F+ E + H NV+ LLG C SEGS +V +M +G L R+ E+ +
Sbjct: 76 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV-- 131
Query: 69 EKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDF 128
+ L A G++YL + +H D+ N +LD F V+DFGLA+ + ++
Sbjct: 132 KDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEY 187
Query: 129 VSISATRGT---IGYIAPE-LISRNFGTVSCKSDVYGFGMVLLE-MTGG 172
S+ G + ++A E L ++ F T KSDV+ FG++L E MT G
Sbjct: 188 YSVHNKTGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWELMTRG 233
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 22/168 (13%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E NEV + H NVV++ G + +V EF+ G+L + + E
Sbjct: 66 ELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-----THTRMNEE 120
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG----LAKFHPKE 125
++ V + LH ++H DIK +ILL H+ +SDFG ++K P+
Sbjct: 121 QIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 177
Query: 126 NDFVSISATRGTIGYIAPELISR-NFGTVSCKSDVYGFGMVLLEMTGG 172
V GT ++APELISR +G + D++ G++++EM G
Sbjct: 178 KXLV------GTPYWMAPELISRLPYGP---EVDIWSLGIMVIEMVDG 216
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 21/163 (12%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
EV + H N+++L G+ + ++ L+ E+ P G++ R + K SR
Sbjct: 61 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSRFDE-------- 111
Query: 74 VASGTAHGIEYLHNGCDVC----ILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
TA I L N C ++H DIKP N+LL N ++DFG + P
Sbjct: 112 --QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR-- 167
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT+ Y+ PE+I K D++ G++ E G
Sbjct: 168 --DTLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVG 206
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 18/169 (10%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFC--SEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSW 68
+F+ E + H NV+ LLG C SEGS +V +M +G L R+ E+ +
Sbjct: 75 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV-- 130
Query: 69 EKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDF 128
+ L A G++YL + +H D+ N +LD F V+DFGLA+ + ++
Sbjct: 131 KDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEY 186
Query: 129 VSISATRGT---IGYIAPE-LISRNFGTVSCKSDVYGFGMVLLE-MTGG 172
S+ G + ++A E L ++ F T KSDV+ FG++L E MT G
Sbjct: 187 YSVHNKTGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWELMTRG 232
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 18/169 (10%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFC--SEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSW 68
+F+ E + H NV+ LLG C SEGS +V +M +G L R+ E+ +
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV-- 132
Query: 69 EKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDF 128
+ L A G++YL + +H D+ N +LD F V+DFGLA+ + ++
Sbjct: 133 KDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEY 188
Query: 129 VSISATRGT---IGYIAPE-LISRNFGTVSCKSDVYGFGMVLLE-MTGG 172
S+ G + ++A E L ++ F T KSDV+ FG++L E MT G
Sbjct: 189 YSVHNKTGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWELMTRG 234
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 18/169 (10%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFC--SEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSW 68
+F+ E + H NV+ LLG C SEGS +V +M +G L R+ E+ +
Sbjct: 72 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV-- 127
Query: 69 EKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDF 128
+ L A G++YL + +H D+ N +LD F V+DFGLA+ + ++
Sbjct: 128 KDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEY 183
Query: 129 VSISATRGT---IGYIAPE-LISRNFGTVSCKSDVYGFGMVLLE-MTGG 172
S+ G + ++A E L ++ F T KSDV+ FG++L E MT G
Sbjct: 184 YSVHNKTGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWELMTRG 229
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 25/165 (15%)
Query: 15 EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEV 74
EV + H N+++L G+ + ++ L+ E+ P G++ R + Q S K E
Sbjct: 84 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDE- 133
Query: 75 ASGTAHGIEYLHNGCDVC----ILHLDIKPHNILLDHNFVPNVSDFGLAKFHP--KENDF 128
TA I L N C ++H DIKP N+LL ++DFG + P + +D
Sbjct: 134 -QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDL 192
Query: 129 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
GT+ Y+ PE+I K D++ G++ E G+
Sbjct: 193 C------GTLDYLPPEMIEGRMHDE--KVDLWSLGVLCYEFLVGK 229
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 17/172 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
EEF +E R+ H NVV LLG ++ ++++ + +G L + + S +
Sbjct: 57 EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTD 116
Query: 70 KLHEVASG------------TAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG 117
V S A G+EYL + ++H D+ N+L+ +SD G
Sbjct: 117 DDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLG 173
Query: 118 LAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
L + + + + + I ++APE I +G S SD++ +G+VL E+
Sbjct: 174 LFREVYAADYYKLLGNSLLPIRWMAPEAIM--YGKFSIDSDIWSYGVVLWEV 223
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 16/163 (9%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
+ EV + ++ H N+++L + S +V E G L I ++ + + +
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIK 128
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVP---NVSDFGLAKFHPKENDFV 129
+V SG I Y+H I+H D+KP NILL+ + DFGL+ +
Sbjct: 129 QVFSG----ITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN---T 178
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
+ GT YIAPE++ GT K DV+ G++L + G
Sbjct: 179 KMKDRIGTAYYIAPEVLR---GTYDEKCDVWSAGVILYILLSG 218
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 21/164 (12%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
EV + H N+++L G+ + ++ L+ E+ P G++ R + Q S K E
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDE 108
Query: 74 VASGTAHGIEYLHNGCDVC----ILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
TA I L N C ++H DIKP N+LL ++DFG + P
Sbjct: 109 --QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRR-- 164
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ GT+ Y+ PE+I K D++ G++ E G+
Sbjct: 165 --TTLSGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGK 204
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 89/194 (45%), Gaps = 41/194 (21%)
Query: 6 KFSAEEFINEVSTIGRIHHVNVVQLLG--------------------FCSEGSKRA---- 41
K++ E+ EV + ++ HVN+V G + E SK +
Sbjct: 46 KYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSK 105
Query: 42 -----LVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHL 96
+ EF G+L++ I ++ RG+ E+ G++Y+H+ ++H
Sbjct: 106 TKCLFIQMEFCDKGTLEQWI--EKRRGEKLDKVLALELFEQITKGVDYIHSKK---LIHR 160
Query: 97 DIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSC 155
D+KP NI L + DFGL +ND + ++GT+ Y++PE I S+++G
Sbjct: 161 DLKPSNIFLVDTKQVKIGDFGLVT--SLKND-GKRTRSKGTLRYMSPEQISSQDYGK--- 214
Query: 156 KSDVYGFGMVLLEM 169
+ D+Y G++L E+
Sbjct: 215 EVDLYALGLILAEL 228
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK-- 70
I E+S + +HH N+V L+ LV+EFM + + + G S K
Sbjct: 67 IREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDL--KKVLDENKTGLQDSQIKIY 124
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS 130
L+++ G AH ++ ILH D+KP N+L++ + ++DFGLA+ S
Sbjct: 125 LYQLLRGVAHCHQHR-------ILHRDLKPQNLLINSDGALKLADFGLARAF--GIPVRS 175
Query: 131 ISATRGTIGYIAPELI--SRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T+ Y AP+++ S+ + T D++ G + EM G+
Sbjct: 176 YTHEVVTLWYRAPDVLMGSKKYST---SVDIWSIGCIFAEMITGK 217
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E INE+ + + N+V L G + +V E++ GSL + ++C E
Sbjct: 62 ELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV------TETCMDE 115
Query: 70 -KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGL-AKFHPKEND 127
++ V +E+LH+ ++H DIK NILL + ++DFG A+ P+++
Sbjct: 116 GQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 172
Query: 128 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
S GT ++APE+++R K D++ G++ +EM G
Sbjct: 173 R---STMVGTPYWMAPEVVTRK--AYGPKVDIWSLGIMAIEMIEG 212
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 22/176 (12%)
Query: 10 EEFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEFMPNGSL--------DRHIFPKE 60
E ++E+ + + +H+N+V LLG C+ G ++ E+ G L D I K
Sbjct: 94 EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKT 153
Query: 61 SRG------QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVS 114
S + E L + A G+ +L CI H D+ NILL H + +
Sbjct: 154 SPAIMEDDELALDLEDLLSFSYQVAKGMAFL--ASKNCI-HRDLAARNILLTHGRITKIC 210
Query: 115 DFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTV-SCKSDVYGFGMVLLEM 169
DFGLA+ ++++V R + ++APE I F V + +SDV+ +G+ L E+
Sbjct: 211 DFGLARHIKNDSNYVVKGNARLPVKWMAPESI---FNCVYTFESDVWSYGIFLWEL 263
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 22/168 (13%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E NEV + H NVV++ G + +V EF+ G+L + + E
Sbjct: 193 ELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT-----HTRMNEE 247
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG----LAKFHPKE 125
++ V + LH ++H DIK +ILL H+ +SDFG ++K P+
Sbjct: 248 QIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 304
Query: 126 NDFVSISATRGTIGYIAPELISR-NFGTVSCKSDVYGFGMVLLEMTGG 172
V GT ++APELISR +G + D++ G++++EM G
Sbjct: 305 KXLV------GTPYWMAPELISRLPYGP---EVDIWSLGIMVIEMVDG 343
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 100/226 (44%), Gaps = 29/226 (12%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
NEV ++ H ++++L + + + LV E NG ++R++ ++R + S +
Sbjct: 60 NEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYL---KNRVKPFSENEARH 116
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF--HPKENDFVSI 131
G+ YLH+ ILH D+ N+LL N ++DFGLA P E +
Sbjct: 117 FMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC 173
Query: 132 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKATRSSKAYFPSW 191
GT YI+PE+ +R+ +SDV+ G + + GR P +
Sbjct: 174 ----GTPNYISPEIATRS--AHGLESDVWSLGCMFYTLLIGR---------------PPF 212
Query: 192 VSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVKPADRPSMT 237
+D + N + E+ S ++ + + ++ PADR S++
Sbjct: 213 DTDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQLLRRNPADRLSLS 258
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
+ EV + ++ H N+++L + S +V E G L I ++ + + +
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIK 128
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILL---DHNFVPNVSDFGLAKFHPKENDFV 129
+V SG I Y+H I+H D+KP NILL + + + DFGL+ +
Sbjct: 129 QVFSG----ITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT--- 178
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
+ GT YIAPE++ GT K DV+ G++L + G
Sbjct: 179 KMKDRIGTAYYIAPEVLR---GTYDEKCDVWSAGVILYILLSG 218
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 22/168 (13%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E NEV + H NVV++ G + +V EF+ G+L + +R + E
Sbjct: 116 ELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV--THTR---MNEE 170
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG----LAKFHPKE 125
++ V + LH ++H DIK +ILL H+ +SDFG ++K P+
Sbjct: 171 QIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 227
Query: 126 NDFVSISATRGTIGYIAPELISR-NFGTVSCKSDVYGFGMVLLEMTGG 172
V GT ++APELISR +G + D++ G++++EM G
Sbjct: 228 KXLV------GTPYWMAPELISRLPYGP---EVDIWSLGIMVIEMVDG 266
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 25/166 (15%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
EV + H N+++L G+ + ++ L+ E+ P G++ R + Q S K E
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDE 110
Query: 74 VASGTAHGIEYLHNGCDVC----ILHLDIKPHNILLDHNFVPNVSDFGLAKFHP--KEND 127
TA I L N C ++H DIKP N+LL ++DFG + P + +D
Sbjct: 111 --QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDD 168
Query: 128 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
GT+ Y+ PE+I K D++ G++ E G+
Sbjct: 169 LC------GTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGK 206
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK-- 70
I E+S + +HH N+V L+ LV+EFM + + + G S K
Sbjct: 67 IREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDL--KKVLDENKTGLQDSQIKIY 124
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS 130
L+++ G AH ++ ILH D+KP N+L++ + ++DFGLA+ S
Sbjct: 125 LYQLLRGVAHCHQHR-------ILHRDLKPQNLLINSDGALKLADFGLARAF--GIPVRS 175
Query: 131 ISATRGTIGYIAPELI--SRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T+ Y AP+++ S+ + T D++ G + EM G+
Sbjct: 176 YTHEVVTLWYRAPDVLMGSKKYST---SVDIWSIGCIFAEMITGK 217
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
+ EV + ++ H N+++L + S +V E G L I ++ + + +
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIK 128
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILL---DHNFVPNVSDFGLAKFHPKENDFV 129
+V SG I Y+H I+H D+KP NILL + + + DFGL+ +
Sbjct: 129 QVFSG----ITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT--- 178
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
+ GT YIAPE++ GT K DV+ G++L + G
Sbjct: 179 KMKDRIGTAYYIAPEVLR---GTYDEKCDVWSAGVILYILLSG 218
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E INE+ + + N+V L G + +V E++ GSL + ++C E
Sbjct: 62 ELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV------TETCMDE 115
Query: 70 -KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGL-AKFHPKEND 127
++ V +E+LH+ ++H DIK NILL + ++DFG A+ P+++
Sbjct: 116 GQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 172
Query: 128 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
S GT ++APE+++R K D++ G++ +EM G
Sbjct: 173 R---SXMVGTPYWMAPEVVTRK--AYGPKVDIWSLGIMAIEMIEG 212
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 21/164 (12%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
EV + H N+++L G+ + ++ L+ E+ P G++ R + Q S K E
Sbjct: 56 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDE 106
Query: 74 VASGTAHGIEYLHNGCDVC----ILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
TA I L N C ++H DIKP N+LL ++DFG + P
Sbjct: 107 --QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-- 162
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ GT+ Y+ PE+I K D++ G++ E G+
Sbjct: 163 --TTLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGK 202
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 25/166 (15%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
EV + H N+++L G+ + ++ L+ E+ P G++ R + Q S K E
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDE 107
Query: 74 VASGTAHGIEYLHNGCDVC----ILHLDIKPHNILLDHNFVPNVSDFGLAKFHP--KEND 127
TA I L N C ++H DIKP N+LL ++DFG + P + D
Sbjct: 108 --QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD 165
Query: 128 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
GT+ Y+ PE+I K D++ G++ E G+
Sbjct: 166 LC------GTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGK 203
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E INE+ + + N+V L G + +V E++ GSL + ++C E
Sbjct: 63 ELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV------TETCMDE 116
Query: 70 -KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGL-AKFHPKEND 127
++ V +E+LH+ ++H DIK NILL + ++DFG A+ P+++
Sbjct: 117 GQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 173
Query: 128 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
S GT ++APE+++R K D++ G++ +EM G
Sbjct: 174 R---SXMVGTPYWMAPEVVTRK--AYGPKVDIWSLGIMAIEMIEG 213
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 22/176 (12%)
Query: 10 EEFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEFMPNGSL--------DRHIFPKE 60
E ++E+ + + +H+N+V LLG C+ G ++ E+ G L D I K
Sbjct: 87 EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKT 146
Query: 61 SRG------QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVS 114
S + E L + A G+ +L CI H D+ NILL H + +
Sbjct: 147 SPAIMEDDELALDLEDLLSFSYQVAKGMAFL--ASKNCI-HRDLAARNILLTHGRITKIC 203
Query: 115 DFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTV-SCKSDVYGFGMVLLEM 169
DFGLA+ ++++V R + ++APE I F V + +SDV+ +G+ L E+
Sbjct: 204 DFGLARDIKNDSNYVVKGNARLPVKWMAPESI---FNCVYTFESDVWSYGIFLWEL 256
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 21/164 (12%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
EV + H N+++L G+ + ++ L+ E+ P G++ R + Q S K E
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDE 110
Query: 74 VASGTAHGIEYLHNGCDVC----ILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
TA I L N C ++H DIKP N+LL ++DFG + P
Sbjct: 111 --QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-- 166
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ GT+ Y+ PE+I K D++ G++ E G+
Sbjct: 167 --TTLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGK 206
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E INE+ + + N+V L G + +V E++ GSL + ++C E
Sbjct: 62 ELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV------TETCMDE 115
Query: 70 -KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGL-AKFHPKEND 127
++ V +E+LH+ ++H DIK NILL + ++DFG A+ P+++
Sbjct: 116 GQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 172
Query: 128 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
S GT ++APE+++R K D++ G++ +EM G
Sbjct: 173 R---SEMVGTPYWMAPEVVTRK--AYGPKVDIWSLGIMAIEMIEG 212
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 21/164 (12%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
EV + H N+++L G+ + ++ L+ E+ P G++ R + Q S K E
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDE 110
Query: 74 VASGTAHGIEYLHNGCDVC----ILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
TA I L N C ++H DIKP N+LL ++DFG + P
Sbjct: 111 --QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-- 166
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ GT+ Y+ PE+I K D++ G++ E G+
Sbjct: 167 --TTLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGK 206
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 25/166 (15%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
EV + H N+++L G+ + ++ L+ E+ P G++ R + Q S K E
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDE 108
Query: 74 VASGTAHGIEYLHNGCDVC----ILHLDIKPHNILLDHNFVPNVSDFGLAKFHP--KEND 127
TA I L N C ++H DIKP N+LL ++DFG + P + D
Sbjct: 109 --QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD 166
Query: 128 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
GT+ Y+ PE+I K D++ G++ E G+
Sbjct: 167 LC------GTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGK 204
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 18/156 (11%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
NE++ + +I H N+V L + LV + + G L I + + + + +
Sbjct: 55 NEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQ 114
Query: 74 VASGTAHGIEYLH-NGCDVCILHLDIKPHNILL---DHNFVPNVSDFGLAKFHPKENDFV 129
V S ++YLH NG I+H D+KP N+L + N ++DFGL+K ++N +
Sbjct: 115 VLS----AVKYLHENG----IVHRDLKPENLLYLTPEENSKIMITDFGLSKM--EQNGIM 164
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMV 165
S + GT GY+APE++++ S D + G++
Sbjct: 165 STAC--GTPGYVAPEVLAQK--PYSKAVDCWSIGVI 196
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 25/166 (15%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
EV + H N+++L G+ + ++ L+ E+ P G++ R + Q S K E
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDE 107
Query: 74 VASGTAHGIEYLHNGCDVC----ILHLDIKPHNILLDHNFVPNVSDFGLAKFHP--KEND 127
TA I L N C ++H DIKP N+LL ++DFG + P + D
Sbjct: 108 --QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD 165
Query: 128 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
GT+ Y+ PE+I K D++ G++ E G+
Sbjct: 166 LC------GTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGK 203
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 15 EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEV 74
EV + H N+++L G+ + ++ L+ E+ P G++ R + Q S K E
Sbjct: 75 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDE- 124
Query: 75 ASGTAHGIEYLHNGCDVC----ILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS 130
TA I L N C ++H DIKP N+LL ++DFG + P
Sbjct: 125 -QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR--- 180
Query: 131 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ GT+ Y+ PE+I K D++ G++ E G+
Sbjct: 181 -TTLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGK 220
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 22/176 (12%)
Query: 10 EEFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEFMPNGSL--------DRHIFPKE 60
E ++E+ + + +H+N+V LLG C+ G ++ E+ G L D I K
Sbjct: 71 EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKT 130
Query: 61 SRG------QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVS 114
S + E L + A G+ +L CI H D+ NILL H + +
Sbjct: 131 SPAIMEDDELALDLEDLLSFSYQVAKGMAFL--ASKNCI-HRDLAARNILLTHGRITKIC 187
Query: 115 DFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTV-SCKSDVYGFGMVLLEM 169
DFGLA+ ++++V R + ++APE I F V + +SDV+ +G+ L E+
Sbjct: 188 DFGLARDIKNDSNYVVKGNARLPVKWMAPESI---FNCVYTFESDVWSYGIFLWEL 240
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 15 EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEV 74
EV + H N+++L G+ + ++ L+ E+ P G++ R + Q S K E
Sbjct: 84 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDE- 133
Query: 75 ASGTAHGIEYLHNGCDVC----ILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS 130
TA I L N C ++H DIKP N+LL ++DFG + P
Sbjct: 134 -QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR--- 189
Query: 131 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ GT+ Y+ PE+I K D++ G++ E G+
Sbjct: 190 -TTLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGK 229
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 21/164 (12%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
EV + H N+++L G+ + ++ L+ E+ P G++ R + Q S K E
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDE 112
Query: 74 VASGTAHGIEYLHNGCDVC----ILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
TA I L N C ++H DIKP N+LL ++DFG + P
Sbjct: 113 --QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-- 168
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ GT+ Y+ PE+I K D++ G++ E G+
Sbjct: 169 --TTLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGK 208
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 22/176 (12%)
Query: 10 EEFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEFMPNGSL--------DRHIFPKE 60
E ++E+ + + +H+N+V LLG C+ G ++ E+ G L D I K
Sbjct: 89 EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKT 148
Query: 61 SRG------QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVS 114
S + E L + A G+ +L CI H D+ NILL H + +
Sbjct: 149 SPAIMEDDELALDLEDLLSFSYQVAKGMAFL--ASKNCI-HRDLAARNILLTHGRITKIC 205
Query: 115 DFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTV-SCKSDVYGFGMVLLEM 169
DFGLA+ ++++V R + ++APE I F V + +SDV+ +G+ L E+
Sbjct: 206 DFGLARDIKNDSNYVVKGNARLPVKWMAPESI---FNCVYTFESDVWSYGIFLWEL 258
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 10/160 (6%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E+F+ E T+ + H ++V+L+G +E ++ E G L + + R S
Sbjct: 84 EKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL---QVRKYSLDLA 139
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
L A + + YL + V H DI N+L+ N + DFGL+++ +++ +
Sbjct: 140 SLILYAYQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYY 195
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
S + I ++APE I NF + SDV+ FG+ + E+
Sbjct: 196 KASKGKLPIKWMAPESI--NFRRFTSASDVWMFGVCMWEI 233
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 21/164 (12%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
EV + H N+++L G+ + ++ L+ E+ P G++ R + Q S K E
Sbjct: 54 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDE 104
Query: 74 VASGTAHGIEYLHNGCDVC----ILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
TA I L N C ++H DIKP N+LL ++DFG + P
Sbjct: 105 --QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-- 160
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ GT+ Y+ PE+I K D++ G++ E G+
Sbjct: 161 --TTLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGK 200
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 21/164 (12%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
EV + H N+++L G+ + ++ L+ E+ P G++ R + Q S K E
Sbjct: 61 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDE 111
Query: 74 VASGTAHGIEYLHNGCDVC----ILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
TA I L N C ++H DIKP N+LL ++DFG + P
Sbjct: 112 --QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-- 167
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ GT+ Y+ PE+I K D++ G++ E G+
Sbjct: 168 --TTLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGK 207
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 10/160 (6%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E+F+ E T+ + H ++V+L+G +E ++ E G L + + R S
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL---QVRKYSLDLA 111
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
L A + + YL + +H DI N+L+ N + DFGL+++ +++ +
Sbjct: 112 SLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYY 167
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
S + I ++APE I NF + SDV+ FG+ + E+
Sbjct: 168 KASKGKLPIKWMAPESI--NFRRFTSASDVWMFGVCMWEI 205
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 10/160 (6%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E+F+ E T+ + H ++V+L+G +E ++ E G L + + R S
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL---QVRKYSLDLA 111
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
L A + + YL + +H DI N+L+ N + DFGL+++ +++ +
Sbjct: 112 SLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYY 167
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
S + I ++APE I NF + SDV+ FG+ + E+
Sbjct: 168 KASKGKLPIKWMAPESI--NFRRFTSASDVWMFGVCMWEI 205
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 21/164 (12%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
EV + H N+++L G+ + ++ L+ E+ P G++ R + Q S K E
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDE 107
Query: 74 VASGTAHGIEYLHNGCDVC----ILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
TA I L N C ++H DIKP N+LL ++DFG + P
Sbjct: 108 --QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-- 163
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ GT+ Y+ PE+I K D++ G++ E G+
Sbjct: 164 --TTLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGK 203
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 10/160 (6%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E+F+ E T+ + H ++V+L+G +E ++ E G L + + R S
Sbjct: 61 EKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL---QVRKYSLDLA 116
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
L A + + YL + +H DI N+L+ N + DFGL+++ +++ +
Sbjct: 117 SLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYY 172
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
S + I ++APE I NF + SDV+ FG+ + E+
Sbjct: 173 KASKGKLPIKWMAPESI--NFRRFTSASDVWMFGVCMWEI 210
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 22/176 (12%)
Query: 10 EEFINEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEFMPNGSL--------DRHIFPKE 60
E ++E+ + + +H+N+V LLG C+ G ++ E+ G L D I K
Sbjct: 94 EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKT 153
Query: 61 SRG------QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVS 114
S + E L + A G+ +L CI H D+ NILL H + +
Sbjct: 154 SPAIMEDDELALDLEDLLSFSYQVAKGMAFL--ASKNCI-HRDLAARNILLTHGRITKIC 210
Query: 115 DFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTV-SCKSDVYGFGMVLLEM 169
DFGLA+ ++++V R + ++APE I F V + +SDV+ +G+ L E+
Sbjct: 211 DFGLARDIKNDSNYVVKGNARLPVKWMAPESI---FNCVYTFESDVWSYGIFLWEL 263
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 10/160 (6%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E+F+ E T+ + H ++V+L+G +E ++ E G L + + R S
Sbjct: 53 EKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL---QVRKYSLDLA 108
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
L A + + YL + +H DI N+L+ N + DFGL+++ +++ +
Sbjct: 109 SLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYY 164
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
S + I ++APE I NF + SDV+ FG+ + E+
Sbjct: 165 KASKGKLPIKWMAPESI--NFRRFTSASDVWMFGVCMWEI 202
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 25/166 (15%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
EV + H N+++L G+ + ++ L+ E+ P G++ R + Q S K E
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDE 112
Query: 74 VASGTAHGIEYLHNGCDVC----ILHLDIKPHNILLDHNFVPNVSDFGLAKFHP--KEND 127
TA I L N C ++H DIKP N+LL ++DFG + P + D
Sbjct: 113 --QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD 170
Query: 128 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
GT+ Y+ PE+I K D++ G++ E G+
Sbjct: 171 LC------GTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGK 208
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
+ ++FI EV+ + + H N+++L G + +V E P GSL + ++ +G
Sbjct: 58 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRL--RKHQGHFLL 114
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKEND 127
L A A G+ YL + +H D+ N+LL + + DFGL + P+ +D
Sbjct: 115 -GTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 170
Query: 128 FVSISATRGT-IGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 169
+ R + APE L +R F S SD + FG+ L EM
Sbjct: 171 HYVMQEHRKVPFAWCAPESLKTRTF---SHASDTWMFGVTLWEM 211
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 10/160 (6%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E+F+ E T+ + H ++V+L+G +E ++ E G L + + R S
Sbjct: 59 EKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL---QVRKYSLDLA 114
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
L A + + YL + +H DI N+L+ N + DFGL+++ +++ +
Sbjct: 115 SLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYY 170
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
S + I ++APE I NF + SDV+ FG+ + E+
Sbjct: 171 KASKGKLPIKWMAPESI--NFRRFTSASDVWMFGVCMWEI 208
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 21/164 (12%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
EV + H N+++L G+ + ++ L+ E+ P G + + + Q S K E
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-------QKLS--KFDE 112
Query: 74 VASGTAHGIEYLHNGCDVC----ILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
TA I L N C ++H DIKP N+LL ++DFG + P
Sbjct: 113 --QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-- 168
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
GT+ Y+ PE+I K D++ G++ E G+
Sbjct: 169 --XXLXGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGK 208
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 10/160 (6%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E+F+ E T+ + H ++V+L+G +E ++ E G L + + R S
Sbjct: 58 EKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL---QVRKYSLDLA 113
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
L A + + YL + +H DI N+L+ N + DFGL+++ +++ +
Sbjct: 114 SLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYY 169
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
S + I ++APE I NF + SDV+ FG+ + E+
Sbjct: 170 KASKGKLPIKWMAPESI--NFRRFTSASDVWMFGVCMWEI 207
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 21/164 (12%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
EV + H N+++L G+ + ++ L+ E+ P G++ R + Q S K E
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDE 107
Query: 74 VASGTAHGIEYLHNGCDVC----ILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
TA I L N C ++H DIKP N+LL ++DFG + P
Sbjct: 108 --QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-- 163
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ GT+ Y+ PE+I K D++ G++ E G+
Sbjct: 164 --TELCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGK 203
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 12/159 (7%)
Query: 15 EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEV 74
E+S + + H ++++L + + +V E+ G L +I K+ + ++
Sbjct: 59 EISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQI 117
Query: 75 ASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISAT 134
IEY H I+H D+KP N+LLD N ++DFGL+ N F+ S
Sbjct: 118 ICA----IEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN-FLKTSC- 168
Query: 135 RGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
G+ Y APE+I+ + DV+ G+VL M GR
Sbjct: 169 -GSPNYAAPEVINGKL-YAGPEVDVWSCGIVLYVMLVGR 205
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 21/164 (12%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
EV + H N+++L G+ + ++ L+ E+ P G++ R + Q S K E
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDE 107
Query: 74 VASGTAHGIEYLHNGCDVC----ILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
TA I L N C ++H DIKP N+LL ++DFG + P
Sbjct: 108 --QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-- 163
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ GT+ Y+ PE+I K D++ G++ E G+
Sbjct: 164 --TXLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGK 203
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
+ ++FI EV+ + + H N+++L G + +V E P GSL + ++ +G
Sbjct: 54 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRL--RKHQGHFLL 110
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKEND 127
L A A G+ YL + +H D+ N+LL + + DFGL + P+ +D
Sbjct: 111 -GTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 166
Query: 128 FVSISATRGT-IGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 169
+ R + APE L +R F S SD + FG+ L EM
Sbjct: 167 HXVMQEHRKVPFAWCAPESLKTRTF---SHASDTWMFGVTLWEM 207
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFC--SEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSW 68
+F+ E + H NV+ LLG C SEGS +V +M +G L R+ E+ +
Sbjct: 78 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV-- 133
Query: 69 EKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK-FHPKEND 127
+ L A G+++L + +H D+ N +LD F V+DFGLA+ KE D
Sbjct: 134 KDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFD 190
Query: 128 FV-SISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLE-MTGG 172
V + + + + ++A E L ++ F T KSDV+ FG++L E MT G
Sbjct: 191 SVHNKTGAKLPVKWMALESLQTQKFTT---KSDVWSFGVLLWELMTRG 235
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 77/177 (43%), Gaps = 26/177 (14%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG 63
K E + EV + ++ H N+ +L F + LV E G L I ++
Sbjct: 65 KQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFS 124
Query: 64 QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILL-----DHNFVPNVSDFGL 118
+ + + +V SG I Y H I+H D+KP N+LL D N + DFGL
Sbjct: 125 EVDAARIIRQVLSG----ITYXHKNK---IVHRDLKPENLLLESKSKDANI--RIIDFGL 175
Query: 119 A---KFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
+ + K D + GT YIAPE++ GT K DV+ G++L + G
Sbjct: 176 STHFEASKKXKDKI------GTAYYIAPEVLH---GTYDEKCDVWSTGVILYILLSG 223
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 12/164 (7%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
+ ++FI EV+ + + H N+++L G + +V E P GSL + ++ +G
Sbjct: 54 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRL--RKHQGHFLL 110
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKEND 127
L A A G+ YL + +H D+ N+LL + + DFGL + P+ +D
Sbjct: 111 -GTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 166
Query: 128 -FVSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 169
+V + + APE L +R F S SD + FG+ L EM
Sbjct: 167 HYVMQEHRKVPFAWCAPESLKTRTF---SHASDTWMFGVTLWEM 207
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
+ ++FI EV+ + + H N+++L G + +V E P GSL + ++ +G
Sbjct: 54 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRL--RKHQGHFLL 110
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKEND 127
L A A G+ YL + +H D+ N+LL + + DFGL + P+ +D
Sbjct: 111 -GTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 166
Query: 128 FVSISATRGT-IGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 169
+ R + APE L +R F S SD + FG+ L EM
Sbjct: 167 HYVMQEHRKVPFAWCAPESLKTRTF---SHASDTWMFGVTLWEM 207
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 71/164 (43%), Gaps = 21/164 (12%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
EV + H N+++L G+ + ++ L+ E+ P G++ R + Q S K E
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDE 108
Query: 74 VASGTAHGIEYLHNGCDVC----ILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
TA I L N C ++H DIKP N+LL ++DFG + P
Sbjct: 109 --QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-- 164
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
GT+ Y+ PE+I K D++ G++ E G+
Sbjct: 165 --DTLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGK 204
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 19/174 (10%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG 63
S+ E++I E+ + H +V+LLG K ++ EF P G++D I + RG
Sbjct: 55 KSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVD-AIMLELDRG 113
Query: 64 QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLA---- 119
+ ++ V + +LH+ I+H D+K N+L+ ++DFG++
Sbjct: 114 --LTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNL 168
Query: 120 KFHPKENDFVSISATRGTIGYIAPELI---SRNFGTVSCKSDVYGFGMVLLEMT 170
K K + F+ GT ++APE++ + K+D++ G+ L+EM
Sbjct: 169 KTLQKRDSFI------GTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMA 216
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
+ ++FI EV+ + + H N+++L G + +V E P GSL + ++ +G
Sbjct: 58 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRL--RKHQGHFLL 114
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKEND 127
L A A G+ YL + +H D+ N+LL + + DFGL + P+ +D
Sbjct: 115 -GTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 170
Query: 128 FVSISATRGT-IGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 169
+ R + APE L +R F S SD + FG+ L EM
Sbjct: 171 HYVMQEHRKVPFAWCAPESLKTRTF---SHASDTWMFGVTLWEM 211
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 74/168 (44%), Gaps = 29/168 (17%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
EV + H N+++L G+ + ++ L+ E+ P G++ R + Q S K E
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDE 110
Query: 74 VASGTAHGIEYLHNGCDVC----ILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
TA I L N C ++H DIKP N+LL ++DFG + P
Sbjct: 111 --QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP------ 162
Query: 130 SISATR----GTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
S+ R GT+ Y+ PE+I K D++ G++ E G+
Sbjct: 163 --SSRRXXLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGK 206
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 21/164 (12%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
EV + H N+++L G+ + ++ L+ E+ P G + + + Q S K E
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-------QKLS--KFDE 112
Query: 74 VASGTAHGIEYLHNGCDVC----ILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
TA I L N C ++H DIKP N+LL ++DFG + P
Sbjct: 113 --QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-- 168
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ GT+ Y+ PE+I K D++ G++ E G+
Sbjct: 169 --TTLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGK 208
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
+ ++FI EV+ + + H N+++L G + +V E P GSL + ++ +G
Sbjct: 64 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRL--RKHQGHFLL 120
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKEND 127
L A A G+ YL + +H D+ N+LL + + DFGL + P+ +D
Sbjct: 121 -GTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 176
Query: 128 FVSISATRGT-IGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 169
+ R + APE L +R F S SD + FG+ L EM
Sbjct: 177 HXVMQEHRKVPFAWCAPESLKTRTF---SHASDTWMFGVTLWEM 217
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 12/164 (7%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
+ ++FI EV+ + + H N+++L G + +V E P GSL + ++ +G
Sbjct: 64 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRL--RKHQGHFLL 120
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKEND 127
L A A G+ YL + +H D+ N+LL + + DFGL + P+ +D
Sbjct: 121 -GTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 176
Query: 128 -FVSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 169
+V + + APE L +R F S SD + FG+ L EM
Sbjct: 177 HYVMQEHRKVPFAWCAPESLKTRTF---SHASDTWMFGVTLWEM 217
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 19/174 (10%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG 63
S+ E++I E+ + H +V+LLG K ++ EF P G++D I + RG
Sbjct: 47 KSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDA-IMLELDRG 105
Query: 64 QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLA---- 119
+ ++ V + +LH+ I+H D+K N+L+ ++DFG++
Sbjct: 106 --LTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNL 160
Query: 120 KFHPKENDFVSISATRGTIGYIAPELI---SRNFGTVSCKSDVYGFGMVLLEMT 170
K K + F+ GT ++APE++ + K+D++ G+ L+EM
Sbjct: 161 KTLQKRDSFI------GTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMA 208
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 74/168 (44%), Gaps = 29/168 (17%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
EV + H N+++L G+ + ++ L+ E+ P G++ R + Q S K E
Sbjct: 59 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDE 109
Query: 74 VASGTAHGIEYLHNGCDVC----ILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
TA I L N C ++H DIKP N+LL ++DFG + P
Sbjct: 110 --QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP------ 161
Query: 130 SISATR----GTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
S+ R GT+ Y+ PE+I K D++ G++ E G+
Sbjct: 162 --SSRRXXLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGK 205
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 79/176 (44%), Gaps = 17/176 (9%)
Query: 1 MLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKE 60
+++ SK E I + G+ H N++ L +G LV E M G L I ++
Sbjct: 59 VIDKSKRDPSEEIEILLRYGQ--HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQK 116
Query: 61 SRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNIL-LDHNFVPN---VSDF 116
+ + LH + +EYLH+ ++H D+KP NIL +D + P + DF
Sbjct: 117 FFSEREASFVLHTIGKT----VEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDF 169
Query: 117 GLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
G AK EN + T ++APE++ R C D++ G++L M G
Sbjct: 170 GFAKQLRAENGLLMTPCY--TANFVAPEVLKRQGYDEGC--DIWSLGILLYTMLAG 221
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 99/220 (45%), Gaps = 29/220 (13%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
EF++E + + H ++V+LLG C + + LV + MP+G L ++ + S +
Sbjct: 63 EFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGS---QL 118
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS 130
L A G+ YL + ++H D+ N+L+ ++DFGLA+ + +
Sbjct: 119 LLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYN 175
Query: 131 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLE-MTGGRRNSNLKATRSSKAYFP 189
+ I ++A E I ++ + +SDV+ +G+ + E MT G + + TR
Sbjct: 176 ADGGKMPIKWMALECI--HYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE------ 227
Query: 190 SWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVK 229
+ D L KG E + +C I ++ + VK
Sbjct: 228 --IPDLLEKG-----------ERLPQPPICTIDVYMVMVK 254
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 71/164 (43%), Gaps = 21/164 (12%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
EV + H N+++L G+ + ++ L+ E+ P G++ R + Q S K E
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDE 107
Query: 74 VASGTAHGIEYLHNGCDVC----ILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
TA I L N C ++H DIKP N+LL ++DFG + P
Sbjct: 108 --QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX 165
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
GT+ Y+ PE+I K D++ G++ E G+
Sbjct: 166 LC----GTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGK 203
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 99/220 (45%), Gaps = 29/220 (13%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
EF++E + + H ++V+LLG C + + LV + MP+G L ++ + S +
Sbjct: 86 EFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGS---QL 141
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS 130
L A G+ YL + ++H D+ N+L+ ++DFGLA+ + +
Sbjct: 142 LLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYN 198
Query: 131 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLE-MTGGRRNSNLKATRSSKAYFP 189
+ I ++A E I ++ + +SDV+ +G+ + E MT G + + TR
Sbjct: 199 ADGGKMPIKWMALECI--HYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE------ 250
Query: 190 SWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVK 229
+ D L KG E + +C I ++ + VK
Sbjct: 251 --IPDLLEKG-----------ERLPQPPICTIDVYMVMVK 277
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
++ I EV + ++ H N +Q G LV E+ + D E +
Sbjct: 99 QDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDL----LEVHKKPLQEV 154
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
++ V G G+ YLH+ ++H D+K NILL + + DFG A N FV
Sbjct: 155 EIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV 211
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMT 170
GT ++APE+I + + G K DV+ G+ +E+
Sbjct: 212 ------GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 247
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
++ I EV + ++ H N +Q G LV E+ + D E +
Sbjct: 60 QDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDL----LEVHKKPLQEV 115
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
++ V G G+ YLH+ ++H D+K NILL + + DFG A N FV
Sbjct: 116 EIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV 172
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMT 170
GT ++APE+I + + G K DV+ G+ +E+
Sbjct: 173 ------GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 208
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 80/186 (43%), Gaps = 24/186 (12%)
Query: 26 NVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIEYL 85
N V+ + + S + E+ NG+L I + Q + +L + Y+
Sbjct: 76 NFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFR---QILEALSYI 132
Query: 86 HNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV------------SISA 133
H+ I+H D+KP NI +D + + DFGLAK + D + ++++
Sbjct: 133 HSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS 189
Query: 134 TRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM-----TGGRRNSNLKATRSSKAYF 188
GT Y+A E++ G + K D+Y G++ EM TG R + LK RS F
Sbjct: 190 AIGTAMYVATEVLD-GTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEF 248
Query: 189 PSWVSD 194
P D
Sbjct: 249 PPDFDD 254
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 8/162 (4%)
Query: 12 FINEVSTIGRIHHVNVVQLLGFCSEGSKRAL--VYEFMPNGSLDRHIFPKESRGQSCSWE 69
++EV+ + + H N+V+ + + L V E+ G L I Q E
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 70 KLHEVASGTAHGIEYLHNGCDV--CILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKEND 127
+ V + ++ H D +LH D+KP N+ LD + DFGLA+ + D
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDED 171
Query: 128 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
F GT Y++PE ++R + + KSD++ G +L E+
Sbjct: 172 FAKEFV--GTPYYMSPEQMNRM--SYNEKSDIWSLGCLLYEL 209
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 79/176 (44%), Gaps = 17/176 (9%)
Query: 1 MLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKE 60
+++ SK E I + G+ H N++ L +G LV E M G L I ++
Sbjct: 59 VIDKSKRDPSEEIEILLRYGQ--HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQK 116
Query: 61 SRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNIL-LDHNFVPN---VSDF 116
+ + LH + +EYLH+ ++H D+KP NIL +D + P + DF
Sbjct: 117 FFSEREASFVLHTIGKT----VEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDF 169
Query: 117 GLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
G AK EN + T ++APE++ R C D++ G++L M G
Sbjct: 170 GFAKQLRAENGLLMTPCY--TANFVAPEVLKRQGYDEGC--DIWSLGILLYTMLAG 221
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 11/158 (6%)
Query: 15 EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEV 74
E+ + H ++++L S S +V E++ G L +I + S ++
Sbjct: 66 EIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQI 125
Query: 75 ASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISAT 134
SG ++Y H ++H D+KP N+LLD + ++DFGL+ + +F+ S
Sbjct: 126 LSG----VDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRXSC- 176
Query: 135 RGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
G+ Y APE+IS + D++ G++L + G
Sbjct: 177 -GSPNYAAPEVISGRL-YAGPEVDIWSSGVILYALLCG 212
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E INE+ + + N+V L G + +V E++ GSL + ++C E
Sbjct: 63 ELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV------TETCMDE 116
Query: 70 -KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGL-AKFHPKEND 127
++ V +E+LH+ ++H +IK NILL + ++DFG A+ P+++
Sbjct: 117 GQIAAVCRECLQALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 173
Query: 128 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
S GT ++APE+++R K D++ G++ +EM G
Sbjct: 174 R---STMVGTPYWMAPEVVTRK--AYGPKVDIWSLGIMAIEMIEG 213
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 14/162 (8%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E+F+ E T+ + H ++V+L+G +E ++ E G L + + R S
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL---QVRKFSLDLA 111
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
L A + + YL + +H DI N+L+ N + DFGL+++ D
Sbjct: 112 SLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDST 165
Query: 130 SISATRGT--IGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
A++G I ++APE I NF + SDV+ FG+ + E+
Sbjct: 166 XXKASKGKLPIKWMAPESI--NFRRFTSASDVWMFGVCMWEI 205
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 74/170 (43%), Gaps = 12/170 (7%)
Query: 7 FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSC 66
S E+ E S + H ++V+LL S +V+EFM L I + G
Sbjct: 68 LSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVY 127
Query: 67 SWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILL--DHNFVP-NVSDFGLAKFHP 123
S + Y H D I+H D+KP N+LL N P + DFG+A
Sbjct: 128 SEAVASHYMRQILEALRYCH---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVA-IQL 183
Query: 124 KENDFVSISATRGTIGYIAPELISRN-FGTVSCKSDVYGFGMVLLEMTGG 172
E+ V+ GT ++APE++ R +G DV+G G++L + G
Sbjct: 184 GESGLVA-GGRVGTPHFMAPEVVKREPYGK---PVDVWGCGVILFILLSG 229
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 34/202 (16%)
Query: 1 MLENSKFSAEEFIN---EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIF 57
++ K SA +F E ++ H N+V+L E S LV++ + G L I
Sbjct: 38 IINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV 97
Query: 58 PKESRGQSCSWEKLHEVASGTAHGIEYLH-NGCDVCILHLDIKPHNILLDHN---FVPNV 113
+E ++ + + ++ A Y H NG I+H ++KP N+LL +
Sbjct: 98 AREFYSEADASHCIQQILESIA----YCHSNG----IVHRNLKPENLLLASKAKGAAVKL 149
Query: 114 SDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+DFGLA + ND + GT GY++PE++ ++ S D++ G++L + G
Sbjct: 150 ADFGLAI---EVNDSEAWHGFAGTPGYLSPEVLKKD--PYSKPVDIWACGVILYILLVG- 203
Query: 174 RNSNLKATRSSKAYFPSWVSDQ 195
Y P W DQ
Sbjct: 204 -------------YPPFWDEDQ 212
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 34/202 (16%)
Query: 1 MLENSKFSAEEFIN---EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIF 57
++ K SA +F E ++ H N+V+L E S LV++ + G L I
Sbjct: 37 IINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV 96
Query: 58 PKESRGQSCSWEKLHEVASGTAHGIEYLH-NGCDVCILHLDIKPHNILLDHN---FVPNV 113
+E ++ + + ++ A Y H NG I+H ++KP N+LL +
Sbjct: 97 AREFYSEADASHCIQQILESIA----YCHSNG----IVHRNLKPENLLLASKAKGAAVKL 148
Query: 114 SDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+DFGLA + ND + GT GY++PE++ ++ S D++ G++L + G
Sbjct: 149 ADFGLAI---EVNDSEAWHGFAGTPGYLSPEVLKKD--PYSKPVDIWACGVILYILLVG- 202
Query: 174 RNSNLKATRSSKAYFPSWVSDQ 195
Y P W DQ
Sbjct: 203 -------------YPPFWDEDQ 211
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 65/124 (52%), Gaps = 7/124 (5%)
Query: 49 NGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHN 108
+ SLD+ +GQ+ + L ++A +E+LH+ + ++H D+KP N+L++
Sbjct: 133 DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS--KLSVIHRDVKPSNVLINAL 190
Query: 109 FVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR--NFGTVSCKSDVYGFGMVL 166
+ DFG++ + D V+ + G Y+APE I+ N S KSD++ G+ +
Sbjct: 191 GQVKMCDFGISGYL---VDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITM 247
Query: 167 LEMT 170
+E+
Sbjct: 248 IELA 251
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 10/160 (6%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E+F+ E T+ + H ++V+L+G +E ++ E G L + + R S
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL---QVRKFSLDLA 491
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
L A + + YL + +H DI N+L+ N + DFGL+++ +++ +
Sbjct: 492 SLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYY 547
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
S + I ++APE I NF + SDV+ FG+ + E+
Sbjct: 548 KASKGKLPIKWMAPESI--NFRRFTSASDVWMFGVCMWEI 585
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 15/155 (9%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
NE++ + +I H N+V L + LV + + G L I K + + + +
Sbjct: 69 NEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQ 128
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNILL---DHNFVPNVSDFGLAKFHPKENDFVS 130
V + YLH + I+H D+KP N+L D +SDFGL+K K D +S
Sbjct: 129 VLD----AVYYLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGK-GDVMS 180
Query: 131 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMV 165
+ GT GY+APE++++ S D + G++
Sbjct: 181 TAC--GTPGYVAPEVLAQK--PYSKAVDCWSIGVI 211
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 78 TAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGT 137
A G+E+L CI H D+ NILL V + DFGLA+ K+ D+V R
Sbjct: 207 VAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 138 IGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ ++APE I T+ +SDV+ FG++L E+
Sbjct: 264 LKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 293
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 23 HHVNVVQLLGFCSE-GSKRALVYEFMPNGSLDRHIFPK 59
HH+NVV LLG C++ G ++ EF G+L ++ K
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 126
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 8/162 (4%)
Query: 12 FINEVSTIGRIHHVNVVQLLGFCSEGSKRAL--VYEFMPNGSLDRHIFPKESRGQSCSWE 69
++EV+ + + H N+V+ + + L V E+ G L I Q E
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 70 KLHEVASGTAHGIEYLHNGCDV--CILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKEND 127
+ V + ++ H D +LH D+KP N+ LD + DFGLA+ +
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS 171
Query: 128 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
F A GT Y++PE ++R + + KSD++ G +L E+
Sbjct: 172 FA--KAFVGTPYYMSPEQMNRM--SYNEKSDIWSLGCLLYEL 209
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 78 TAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGT 137
A G+E+L CI H D+ NILL V + DFGLA+ K+ D+V R
Sbjct: 209 VAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 138 IGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ ++APE I T+ +SDV+ FG++L E+
Sbjct: 266 LKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 295
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 23 HHVNVVQLLGFCSE-GSKRALVYEFMPNGSLDRHIFPK 59
HH+NVV LLG C++ G ++ EF G+L ++ K
Sbjct: 91 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 128
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 15 EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEV 74
EV + H N+++L G+ + ++ L+ E+ P G++ R + Q S K E
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDE- 109
Query: 75 ASGTAHGIEYLHNGCDVC----ILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS 130
TA I L N C ++H DIKP N+LL +++FG + P
Sbjct: 110 -QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR--- 165
Query: 131 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ GT+ Y+ PE+I K D++ G++ E G+
Sbjct: 166 -TTLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGK 205
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 34/202 (16%)
Query: 1 MLENSKFSAEEFIN---EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIF 57
++ K SA +F E ++ H N+V+L E S LV++ + G L I
Sbjct: 61 IINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV 120
Query: 58 PKESRGQSCSWEKLHEVASGTAHGIEYLH-NGCDVCILHLDIKPHNILLDHN---FVPNV 113
+E ++ + + ++ I Y H NG I+H ++KP N+LL +
Sbjct: 121 AREFYSEADASHCIQQI----LESIAYCHSNG----IVHRNLKPENLLLASKAKGAAVKL 172
Query: 114 SDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+DFGLA + ND + GT GY++PE++ ++ S D++ G++L + G
Sbjct: 173 ADFGLAI---EVNDSEAWHGFAGTPGYLSPEVLKKD--PYSKPVDIWACGVILYILLVG- 226
Query: 174 RNSNLKATRSSKAYFPSWVSDQ 195
Y P W DQ
Sbjct: 227 -------------YPPFWDEDQ 235
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 78 TAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGT 137
A G+E+L CI H D+ NILL V + DFGLA+ K+ D+V R
Sbjct: 200 VAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 138 IGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ ++APE I T+ +SDV+ FG++L E+
Sbjct: 257 LKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 286
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 23 HHVNVVQLLGFCSE-GSKRALVYEFMPNGSLDRHIFPKES 61
HH+NVV LLG C++ G ++ EF G+L ++ K +
Sbjct: 82 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN 121
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 78 TAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGT 137
A G+E+L CI H D+ NILL V + DFGLA+ K+ D+V R
Sbjct: 202 VAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 138 IGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ ++APE I T+ +SDV+ FG++L E+
Sbjct: 259 LKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 288
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 23 HHVNVVQLLGFCSE-GSKRALVYEFMPNGSLDRHIFPKES 61
HH+NVV LLG C++ G ++ EF G+L ++ K +
Sbjct: 84 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN 123
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 21/164 (12%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
EV + H N+++L G+ + ++ L+ E+ P G++ R + Q S K E
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDE 110
Query: 74 VASGTAHGIEYLHNGCDVC----ILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
TA I L N C ++H DIKP N+LL +++FG + P
Sbjct: 111 --QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR-- 166
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ GT+ Y+ PE+I K D++ G++ E G+
Sbjct: 167 --TTLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGK 206
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 18/187 (9%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
+ I E+ + + +V G + ++ E M GSLD+ + KE++ E
Sbjct: 60 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KEAK--RIPEEI 115
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK--FHPKENDF 128
L +V+ G+ YL I+H D+KP NIL++ + DFG++ N F
Sbjct: 116 LGKVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 173
Query: 129 VSISATRGTIGYIAPELISRNFGT-VSCKSDVYGFGMVLLEMTGGRRNSNLKATRSSKAY 187
V GT Y+APE R GT S +SD++ G+ L+E+ GR + +A
Sbjct: 174 V------GTRSYMAPE---RLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAI 224
Query: 188 FPSWVSD 194
F V D
Sbjct: 225 FGRPVVD 231
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 34/202 (16%)
Query: 1 MLENSKFSAEEFIN---EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIF 57
++ K SA +F E ++ H N+V+L E S LV++ + G L I
Sbjct: 38 IINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV 97
Query: 58 PKESRGQSCSWEKLHEVASGTAHGIEYLH-NGCDVCILHLDIKPHNILLDHN---FVPNV 113
+E ++ + + ++ A Y H NG I+H ++KP N+LL +
Sbjct: 98 AREFYSEADASHCIQQILESIA----YCHSNG----IVHRNLKPENLLLASKAKGAAVKL 149
Query: 114 SDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+DFGLA + ND + GT GY++PE++ ++ S D++ G++L + G
Sbjct: 150 ADFGLAI---EVNDSEAWHGFAGTPGYLSPEVLKKD--PYSKPVDIWACGVILYILLVG- 203
Query: 174 RNSNLKATRSSKAYFPSWVSDQ 195
Y P W DQ
Sbjct: 204 -------------YPPFWDEDQ 212
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 77/176 (43%), Gaps = 17/176 (9%)
Query: 1 MLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKE 60
+++ SK E I + G+ H N++ L +G +V E M G L I
Sbjct: 54 IIDKSKRDPTEEIEILLRYGQ--HPNIITLKDVYDDGKYVYVVTELMKGGELLDKIL--- 108
Query: 61 SRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNIL-LDHNFVPN---VSDF 116
R + S + V +EYLH ++H D+KP NIL +D + P + DF
Sbjct: 109 -RQKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDF 164
Query: 117 GLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
G AK EN + T ++APE++ R +C D++ G++L M G
Sbjct: 165 GFAKQLRAENGLLMTPCY--TANFVAPEVLERQGYDAAC--DIWSLGVLLYTMLTG 216
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 16/154 (10%)
Query: 24 HVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIE 83
H +++ L+ S LV++ M G L F + + S ++ + +
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGEL----FDYLTEKVALSEKETRSIMRSLLEAVS 214
Query: 84 YLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLA-KFHPKENDFVSISATRGTIGYIA 142
+LH I+H D+KP NILLD N +SDFG + P E + GT GY+A
Sbjct: 215 FLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK----LRELCGTPGYLA 267
Query: 143 PELISRNFGTV----SCKSDVYGFGMVLLEMTGG 172
PE++ + + D++ G++L + G
Sbjct: 268 PEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 71/164 (43%), Gaps = 21/164 (12%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
EV + H N+++L G+ + ++ L+ E+ P G++ R + Q S K E
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDE 112
Query: 74 VASGTAHGIEYLHNGCDVC----ILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
TA I L N C ++H DIKP N+LL ++DFG + P
Sbjct: 113 --QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-- 168
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ GT+ Y+ PE I K D++ G++ E G+
Sbjct: 169 --TTLCGTLDYLPPEXIEGRXH--DEKVDLWSLGVLCYEFLVGK 208
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 24/179 (13%)
Query: 7 FSAEEF-------INEVSTIGRIH-HVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFP 58
FSAEE + EV + ++ H N++QL + LV++ M G L F
Sbjct: 58 FSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL----FD 113
Query: 59 KESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGL 118
+ + S ++ ++ I LH + I+H D+KP NILLD + ++DFG
Sbjct: 114 YLTEKVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGF 170
Query: 119 A-KFHPKENDFVSISATRGTIGYIAPELI----SRNFGTVSCKSDVYGFGMVLLEMTGG 172
+ + P E + + GT Y+APE+I + N + D++ G+++ + G
Sbjct: 171 SCQLDPGEK----LRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 74/162 (45%), Gaps = 6/162 (3%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
+ E+ + R H NV+ + + A+ ++ ++ ++ K + Q S + +
Sbjct: 89 LREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLY-KLLKSQQLSNDHIC 147
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS-I 131
G++Y+H+ +LH D+KP N+L++ + DFGLA+ E+D +
Sbjct: 148 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFL 204
Query: 132 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T Y APE++ + G D++ G +L EM R
Sbjct: 205 TEXVATRWYRAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNR 245
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 8/162 (4%)
Query: 12 FINEVSTIGRIHHVNVVQLLGFCSEGSKRAL--VYEFMPNGSLDRHIFPKESRGQSCSWE 69
++EV+ + + H N+V+ + + L V E+ G L I Q E
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 70 KLHEVASGTAHGIEYLHNGCDV--CILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKEND 127
+ V + ++ H D +LH D+KP N+ LD + DFGLA+ +
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS 171
Query: 128 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
F GT Y++PE ++R + + KSD++ G +L E+
Sbjct: 172 FAKTFV--GTPYYMSPEQMNRM--SYNEKSDIWSLGCLLYEL 209
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 81/179 (45%), Gaps = 24/179 (13%)
Query: 7 FSAEEF-------INEVSTIGRIH-HVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFP 58
FSAEE + EV + ++ H N++QL + LV++ M G L F
Sbjct: 45 FSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL----FD 100
Query: 59 KESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGL 118
+ + S ++ ++ I LH + I+H D+KP NILLD + ++DFG
Sbjct: 101 YLTEKVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGF 157
Query: 119 A-KFHPKENDFVSISATRGTIGYIAPELI----SRNFGTVSCKSDVYGFGMVLLEMTGG 172
+ + P E + GT Y+APE+I + N + D++ G+++ + G
Sbjct: 158 SCQLDPGEK----LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 21/131 (16%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV----------- 129
+ Y+H+ I+H D+KP NI +D + + DFGLAK + D +
Sbjct: 128 ALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 130 -SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM-----TGGRRNSNLKATRS 183
++++ GT Y+A E++ G + K D+Y G++ EM TG R + LK RS
Sbjct: 185 DNLTSAIGTAMYVATEVLD-GTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRS 243
Query: 184 SKAYFPSWVSD 194
FP D
Sbjct: 244 VSIEFPPDFDD 254
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 63/124 (50%), Gaps = 7/124 (5%)
Query: 49 NGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHN 108
+ SLD+ +GQ+ + L ++A +E+LH+ + ++H D+KP N+L++
Sbjct: 89 DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINAL 146
Query: 109 FVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT--VSCKSDVYGFGMVL 166
+ DFG++ + D V+ G Y+APE I+ S KSD++ G+ +
Sbjct: 147 GQVKMCDFGISGYL---VDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITM 203
Query: 167 LEMT 170
+E+
Sbjct: 204 IELA 207
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 10/100 (10%)
Query: 81 GIEYLHNGCDVC-------ILHLDIKPHNILLDHNFVPNVSDFGLAK-FHPKENDFVSIS 132
IE + + C I+H D+KP NIL+ V DFG+A+ N +
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTA 177
Query: 133 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
A GT Y++PE + +V +SDVY G VL E+ G
Sbjct: 178 AVIGTAQYLSPEQARGD--SVDARSDVYSLGCVLYEVLTG 215
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 79/179 (44%), Gaps = 34/179 (18%)
Query: 33 FCSEGSKRAL--VYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAH---GIEYLHN 87
FC+ +K L V E++ G L HI QSC L A G+++LH+
Sbjct: 85 FCTFQTKENLFFVMEYLNGGDLMYHI-------QSCHKFDLSRATFYAAEIILGLQFLHS 137
Query: 88 GCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFH----PKENDFVSISATRGTIGYIAP 143
I++ D+K NILLD + ++DFG+ K + K N+F GT YIAP
Sbjct: 138 KG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFC------GTPDYIAP 188
Query: 144 ELISRNFGTVSCKSDVYGFGMVLLEMTGGR-------RNSNLKATRSSKAYFPSWVSDQ 195
E++ + D + FG++L EM G+ + R ++P W+ +
Sbjct: 189 EILLGQ--KYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKE 245
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 27/210 (12%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E+MP G + H+ R S
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL----RRIGRFSEP 141
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK +
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL 198
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG-------RRNSNLKAT 181
GT Y+APE+I S+ + D + G+++ EM G + +
Sbjct: 199 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 182 RSSKAYFPSWVSDQLNKGGNLELRNVTEIE 211
S K FPS S L LRN+ +++
Sbjct: 251 VSGKVRFPSHFSSDLKD----LLRNLLQVD 276
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 11/161 (6%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
EE EV+ + + H N+VQ E +V ++ G L + I +G +
Sbjct: 68 EESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRI--NAQKGVLFQED 125
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
++ + ++++H D ILH DIK NI L + + DFG+A+ N V
Sbjct: 126 QILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL---NSTV 179
Query: 130 SIS-ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
++ A GT Y++PE+ + KSD++ G VL E+
Sbjct: 180 ELARACIGTPYYLSPEICENK--PYNNKSDIWALGCVLYEL 218
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 10/160 (6%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E+F+ E T+ + H ++V+L+G +E ++ E G L + + R S
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL---QVRKFSLDLA 111
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
L A + + YL + +H DI N+L+ + DFGL+++ +++ +
Sbjct: 112 SLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYM-EDSTYY 167
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
S + I ++APE I NF + SDV+ FG+ + E+
Sbjct: 168 KASKGKLPIKWMAPESI--NFRRFTSASDVWMFGVCMWEI 205
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 27/210 (12%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E+MP G + H+ R S
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL----RRIGRFSEP 141
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK +
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL 198
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG-------RRNSNLKAT 181
GT Y+APE+I S+ + D + G+++ EM G + +
Sbjct: 199 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 182 RSSKAYFPSWVSDQLNKGGNLELRNVTEIE 211
S K FPS S L LRN+ +++
Sbjct: 251 VSGKVRFPSHFSSDLKD----LLRNLLQVD 276
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 10/100 (10%)
Query: 81 GIEYLHNGCDVC-------ILHLDIKPHNILLDHNFVPNVSDFGLAK-FHPKENDFVSIS 132
IE + + C I+H D+KP NI++ V DFG+A+ N +
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
Query: 133 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
A GT Y++PE + +V +SDVY G VL E+ G
Sbjct: 178 AVIGTAQYLSPEQARGD--SVDARSDVYSLGCVLYEVLTG 215
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 81/179 (45%), Gaps = 24/179 (13%)
Query: 7 FSAEEF-------INEVSTIGRIH-HVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFP 58
FSAEE + EV + ++ H N++QL + LV++ M G L F
Sbjct: 58 FSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL----FD 113
Query: 59 KESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGL 118
+ + S ++ ++ I LH + I+H D+KP NILLD + ++DFG
Sbjct: 114 YLTEKVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGF 170
Query: 119 A-KFHPKENDFVSISATRGTIGYIAPELI----SRNFGTVSCKSDVYGFGMVLLEMTGG 172
+ + P E + GT Y+APE+I + N + D++ G+++ + G
Sbjct: 171 SCQLDPGEK----LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 12/163 (7%)
Query: 14 NEVSTIGRIHHVNVVQLLG--FCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKL 71
E+ + R+ H NV+QL+ + E K +V E+ G + E R C +
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVC---QA 111
Query: 72 HEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK-FHPKENDFVS 130
H G+EYLH+ I+H DIKP N+LL +S G+A+ HP D +
Sbjct: 112 HGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAAD-DT 167
Query: 131 ISATRGTIGYIAPELISRNFGTVS-CKSDVYGFGMVLLEMTGG 172
++G+ + PE I+ T S K D++ G+ L +T G
Sbjct: 168 CRTSQGSPAFQPPE-IANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 10/100 (10%)
Query: 81 GIEYLHNGCDVC-------ILHLDIKPHNILLDHNFVPNVSDFGLAK-FHPKENDFVSIS 132
IE + + C I+H D+KP NI++ V DFG+A+ N +
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
Query: 133 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
A GT Y++PE + +V +SDVY G VL E+ G
Sbjct: 178 AVIGTAQYLSPEQARGD--SVDARSDVYSLGCVLYEVLTG 215
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
+ I E+ + + +V G + ++ E M GSLD+ + K R +
Sbjct: 53 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ-VLKKAGR---IPEQI 108
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKE--NDF 128
L +V+ G+ YL I+H D+KP NIL++ + DFG++ E N+F
Sbjct: 109 LGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEF 166
Query: 129 VSISATRGTIGYIAPELISRNFGT-VSCKSDVYGFGMVLLEMTGGR 173
V GT Y++PE R GT S +SD++ G+ L+EM GR
Sbjct: 167 V------GTRSYMSPE---RLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 26/168 (15%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG------QSC 66
+ E+ + ++ H N+V LL + LV+E+ + L H + RG +S
Sbjct: 50 LREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVL--HELDRYQRGVPEHLVKSI 107
Query: 67 SWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKEN 126
+W+ L V H CI H D+KP NIL+ + V + DFG A+ +
Sbjct: 108 TWQTLQAVNFCHKHN----------CI-HRDVKPENILITKHSVIKLCDFGFARLLTGPS 156
Query: 127 DFVSISATRGTIGYIAPELI--SRNFGTVSCKSDVYGFGMVLLEMTGG 172
D+ T Y +PEL+ +G DV+ G V E+ G
Sbjct: 157 DYYDDEV--ATRWYRSPELLVGDTQYGP---PVDVWAIGCVFAELLSG 199
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 15/175 (8%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFC--SEGSKRA--LVYEFMPNGSLDRHIFPKESRGQS 65
EE E +H N+++L+ +C G+K L+ F G+L I + +G
Sbjct: 71 EEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNF 130
Query: 66 CSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG---LAKFH 122
+ +++ + G G+E +H H D+KP NILL P + D G A H
Sbjct: 131 LTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIH 187
Query: 123 PKEN----DFVSISATRGTIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLEMTGG 172
+ + +A R TI Y APEL S ++ + ++DV+ G VL M G
Sbjct: 188 VEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFG 242
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 69/150 (46%), Gaps = 24/150 (16%)
Query: 69 EKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDF 128
E L ++ T + +L ++ I+H DIKP NILLD + + DFG++ + D
Sbjct: 125 EILGKITLATVKALNHLKE--NLKIIHRDIKPSNILLDRSGNIKLCDFGISG---QLVDS 179
Query: 129 VSISATRGTIGYIAPELI--SRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKATRSSKA 186
++ + G Y+APE I S + +SDV+ G+ L E+ GR
Sbjct: 180 IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP----------- 228
Query: 187 YFPSW--VSDQLN---KGGNLELRNVTEIE 211
+P W V DQL KG +L N E E
Sbjct: 229 -YPKWNSVFDQLTQVVKGDPPQLSNSEERE 257
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 12/159 (7%)
Query: 15 EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEV 74
E+S + + H ++++L + +V E+ N D +I ++ + + ++
Sbjct: 54 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQI 112
Query: 75 ASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISAT 134
S +EY H I+H D+KP N+LLD + ++DFGL+ + +F+ S
Sbjct: 113 ISA----VEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSC- 163
Query: 135 RGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
G+ Y APE+IS + DV+ G++L M R
Sbjct: 164 -GSPNYAAPEVISGKL-YAGPEVDVWSCGVILYVMLCRR 200
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 10/100 (10%)
Query: 81 GIEYLHNGCDVC-------ILHLDIKPHNILLDHNFVPNVSDFGLAK-FHPKENDFVSIS 132
IE + + C I+H D+KP NI++ V DFG+A+ N +
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
Query: 133 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
A GT Y++PE + +V +SDVY G VL E+ G
Sbjct: 178 AVIGTAQYLSPEQARGD--SVDARSDVYSLGCVLYEVLTG 215
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 10/100 (10%)
Query: 81 GIEYLHNGCDVC-------ILHLDIKPHNILLDHNFVPNVSDFGLAK-FHPKENDFVSIS 132
IE + + C I+H D+KP NI++ V DFG+A+ N +
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
Query: 133 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
A GT Y++PE + +V +SDVY G VL E+ G
Sbjct: 178 AVIGTAQYLSPEQARGD--SVDARSDVYSLGCVLYEVLTG 215
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 12/135 (8%)
Query: 38 SKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLD 97
K + + + M G L H+ S+ S + A+ G+E++HN +++ D
Sbjct: 265 DKLSFILDLMNGGDLHYHL----SQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRD 317
Query: 98 IKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKS 157
+KP NILLD + +SD GLA K+ S+ GT GY+APE++ + S +
Sbjct: 318 LKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGYMAPEVLQKGVAYDSS-A 372
Query: 158 DVYGFGMVLLEMTGG 172
D + G +L ++ G
Sbjct: 373 DWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 12/135 (8%)
Query: 38 SKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLD 97
K + + + M G L H+ S+ S + A+ G+E++HN +++ D
Sbjct: 265 DKLSFILDLMNGGDLHYHL----SQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRD 317
Query: 98 IKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKS 157
+KP NILLD + +SD GLA K+ S+ GT GY+APE++ + S +
Sbjct: 318 LKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGYMAPEVLQKGVAYDSS-A 372
Query: 158 DVYGFGMVLLEMTGG 172
D + G +L ++ G
Sbjct: 373 DWFSLGCMLFKLLRG 387
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 21/164 (12%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAL--VYEFMPNGSLDRHIFPKESRGQSCS 67
E+ E++ + ++ H NVV+L+ + ++ L V+E + G + + + S
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV-----MEVPTLKPLS 135
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKEND 127
++ GIEYLH I+H DIKP N+L+ + ++DFG++ N+
Sbjct: 136 EDQARFYFQDLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVS------NE 186
Query: 128 F----VSISATRGTIGYIAPELISRNFGTVSCKS-DVYGFGMVL 166
F +S T GT ++APE +S S K+ DV+ G+ L
Sbjct: 187 FKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 18/166 (10%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
+ I E+ + + +V G + ++ E M GSLD+ + K R +
Sbjct: 69 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ-VLKKAGR---IPEQI 124
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK--FHPKENDF 128
L +V+ G+ YL I+H D+KP NIL++ + DFG++ N F
Sbjct: 125 LGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 182
Query: 129 VSISATRGTIGYIAPELISRNFGT-VSCKSDVYGFGMVLLEMTGGR 173
V GT Y++PE R GT S +SD++ G+ L+EM GR
Sbjct: 183 V------GTRSYMSPE---RLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 12/159 (7%)
Query: 15 EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEV 74
E+S + + H ++++L + +V E+ N D +I ++ + + ++
Sbjct: 63 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQI 121
Query: 75 ASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISAT 134
S +EY H I+H D+KP N+LLD + ++DFGL+ N F+ S
Sbjct: 122 ISA----VEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-FLKTSC- 172
Query: 135 RGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
G+ Y APE+IS + DV+ G++L M R
Sbjct: 173 -GSPNYAAPEVISGKL-YAGPEVDVWSCGVILYVMLCRR 209
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 12/159 (7%)
Query: 15 EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEV 74
E+S + + H ++++L + +V E+ N D +I ++ + + ++
Sbjct: 64 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQI 122
Query: 75 ASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISAT 134
S +EY H I+H D+KP N+LLD + ++DFGL+ N F+ S
Sbjct: 123 ISA----VEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-FLKTSC- 173
Query: 135 RGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
G+ Y APE+IS + DV+ G++L M R
Sbjct: 174 -GSPNYAAPEVISGKL-YAGPEVDVWSCGVILYVMLCRR 210
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 12/135 (8%)
Query: 38 SKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLD 97
K + + + M G L H+ S+ S + A+ G+E++HN +++ D
Sbjct: 264 DKLSFILDLMNGGDLHYHL----SQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRD 316
Query: 98 IKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKS 157
+KP NILLD + +SD GLA K+ S+ GT GY+APE++ + S +
Sbjct: 317 LKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGYMAPEVLQKGVAYDSS-A 371
Query: 158 DVYGFGMVLLEMTGG 172
D + G +L ++ G
Sbjct: 372 DWFSLGCMLFKLLRG 386
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 12/135 (8%)
Query: 38 SKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLD 97
K + + + M G L H+ S+ S + A+ G+E++HN +++ D
Sbjct: 265 DKLSFILDLMNGGDLHYHL----SQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRD 317
Query: 98 IKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKS 157
+KP NILLD + +SD GLA K+ S+ GT GY+APE++ + S +
Sbjct: 318 LKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGYMAPEVLQKGVAYDSS-A 372
Query: 158 DVYGFGMVLLEMTGG 172
D + G +L ++ G
Sbjct: 373 DWFSLGCMLFKLLRG 387
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 81/173 (46%), Gaps = 19/173 (10%)
Query: 5 SKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQ 64
S+ E+++ E+ + H N+V+LL + ++ EF G++D + E +
Sbjct: 74 SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE---R 130
Query: 65 SCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLA----K 120
+ ++ V T + YLH D I+H D+K NIL + ++DFG++ +
Sbjct: 131 PLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR 187
Query: 121 FHPKENDFVSISATRGTIGYIAPELI---SRNFGTVSCKSDVYGFGMVLLEMT 170
+ + F+ GT ++APE++ + K+DV+ G+ L+EM
Sbjct: 188 XIQRRDSFI------GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMA 234
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 12/159 (7%)
Query: 15 EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEV 74
E+S + + H ++++L + +V E+ N D +I ++ + + ++
Sbjct: 58 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQI 116
Query: 75 ASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISAT 134
S +EY H I+H D+KP N+LLD + ++DFGL+ + +F+ S
Sbjct: 117 ISA----VEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSC- 167
Query: 135 RGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
G+ Y APE+IS + DV+ G++L M R
Sbjct: 168 -GSPNYAAPEVISGKL-YAGPEVDVWSCGVILYVMLCRR 204
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 81/173 (46%), Gaps = 19/173 (10%)
Query: 5 SKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQ 64
S+ E+++ E+ + H N+V+LL + ++ EF G++D + E +
Sbjct: 74 SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE---R 130
Query: 65 SCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLA----K 120
+ ++ V T + YLH D I+H D+K NIL + ++DFG++ +
Sbjct: 131 PLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR 187
Query: 121 FHPKENDFVSISATRGTIGYIAPELI---SRNFGTVSCKSDVYGFGMVLLEMT 170
+ + F+ GT ++APE++ + K+DV+ G+ L+EM
Sbjct: 188 XIQRRDXFI------GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMA 234
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 10/100 (10%)
Query: 81 GIEYLHNGCDVC-------ILHLDIKPHNILLDHNFVPNVSDFGLAK-FHPKENDFVSIS 132
IE + + C I+H D+KP NI++ V DFG+A+ N +
Sbjct: 135 AIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 194
Query: 133 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
A GT Y++PE + +V +SDVY G VL E+ G
Sbjct: 195 AVIGTAQYLSPEQARGD--SVDARSDVYSLGCVLYEVLTG 232
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 81/173 (46%), Gaps = 19/173 (10%)
Query: 5 SKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQ 64
S+ E+++ E+ + H N+V+LL + ++ EF G++D + E +
Sbjct: 74 SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE---R 130
Query: 65 SCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLA----K 120
+ ++ V T + YLH D I+H D+K NIL + ++DFG++ +
Sbjct: 131 PLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR 187
Query: 121 FHPKENDFVSISATRGTIGYIAPELI---SRNFGTVSCKSDVYGFGMVLLEMT 170
+ + F+ GT ++APE++ + K+DV+ G+ L+EM
Sbjct: 188 TIQRRDSFI------GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMA 234
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 13/163 (7%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
I E+S + ++H N+V+LL +K LV+EF+ S+D F S +
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIK 109
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFH--PKENDFVS 130
G+ + H+ +LH D+KP N+L++ ++DFGLA+ P
Sbjct: 110 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 166
Query: 131 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T+ Y APE++ S D++ G + EM R
Sbjct: 167 VV----TLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 13/163 (7%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
I E+S + ++H N+V+LL +K LV+EF+ S+D F S +
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIK 108
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFH--PKENDFVS 130
G+ + H+ +LH D+KP N+L++ ++DFGLA+ P
Sbjct: 109 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 165
Query: 131 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T+ Y APE++ S D++ G + EM R
Sbjct: 166 VV----TLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 32/187 (17%)
Query: 3 ENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKR-------ALVYEFMPNGSLDRH 55
E S F E V + H N+ LGF + +K LV ++ +GSL
Sbjct: 65 ERSWFREAEIYQTVM----LRHENI---LGFIAADNKDNGTWTQLWLVSDYHEHGSL--- 114
Query: 56 IFPKESRGQSCSWEKLHEVASGTAHGIEYLH-----NGCDVCILHLDIKPHNILLDHNFV 110
F +R + + E + ++A TA G+ +LH I H D+K NIL+ N
Sbjct: 115 -FDYLNR-YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT 172
Query: 111 PNVSDFGLAKFHPKENDFVSISATR--GTIGYIAPELIS-----RNFGTVSCKSDVYGFG 163
++D GLA H D + I+ GT Y+APE++ ++F + ++D+Y G
Sbjct: 173 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFK-RADIYAMG 231
Query: 164 MVLLEMT 170
+V E+
Sbjct: 232 LVFWEIA 238
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 32/187 (17%)
Query: 3 ENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKR-------ALVYEFMPNGSLDRH 55
E S F E V + H N+ LGF + +K LV ++ +GSL
Sbjct: 42 ERSWFREAEIYQTVM----LRHENI---LGFIAADNKDNGTWTQLWLVSDYHEHGSL--- 91
Query: 56 IFPKESRGQSCSWEKLHEVASGTAHGIEYLH-----NGCDVCILHLDIKPHNILLDHNFV 110
F +R + + E + ++A TA G+ +LH I H D+K NIL+ N
Sbjct: 92 -FDYLNR-YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT 149
Query: 111 PNVSDFGLAKFHPKENDFVSISATR--GTIGYIAPELIS-----RNFGTVSCKSDVYGFG 163
++D GLA H D + I+ GT Y+APE++ ++F + ++D+Y G
Sbjct: 150 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFK-RADIYAMG 208
Query: 164 MVLLEMT 170
+V E+
Sbjct: 209 LVFWEIA 215
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 21/163 (12%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
E+ +HH N+++L + + + L+ E+ P G L + + +SC++++
Sbjct: 72 REIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL------QKSCTFDE--- 122
Query: 74 VASGTAHGIEYLHNGCDVC----ILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
TA +E L + C ++H DIKP N+LL ++DFG + P +
Sbjct: 123 --QRTATIMEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPS----L 176
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT+ Y+ PE+I K D++ G++ E+ G
Sbjct: 177 RRKTMCGTLDYLPPEMIEGRMHNE--KVDLWCIGVLCYELLVG 217
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 32/187 (17%)
Query: 3 ENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKR-------ALVYEFMPNGSLDRH 55
E S F E V + H N+ LGF + +K LV ++ +GSL
Sbjct: 39 ERSWFREAEIYQTVM----LRHENI---LGFIAADNKDNGTWTQLWLVSDYHEHGSL--- 88
Query: 56 IFPKESRGQSCSWEKLHEVASGTAHGIEYLH-----NGCDVCILHLDIKPHNILLDHNFV 110
F +R + + E + ++A TA G+ +LH I H D+K NIL+ N
Sbjct: 89 -FDYLNR-YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT 146
Query: 111 PNVSDFGLAKFHPKENDFVSISATR--GTIGYIAPELIS-----RNFGTVSCKSDVYGFG 163
++D GLA H D + I+ GT Y+APE++ ++F + ++D+Y G
Sbjct: 147 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFK-RADIYAMG 205
Query: 164 MVLLEMT 170
+V E+
Sbjct: 206 LVFWEIA 212
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 32/187 (17%)
Query: 3 ENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKR-------ALVYEFMPNGSLDRH 55
E S F E V + H N+ LGF + +K LV ++ +GSL
Sbjct: 40 ERSWFREAEIYQTVM----LRHENI---LGFIAADNKDNGTWTQLWLVSDYHEHGSL--- 89
Query: 56 IFPKESRGQSCSWEKLHEVASGTAHGIEYLH-----NGCDVCILHLDIKPHNILLDHNFV 110
F +R + + E + ++A TA G+ +LH I H D+K NIL+ N
Sbjct: 90 -FDYLNR-YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT 147
Query: 111 PNVSDFGLAKFHPKENDFVSISATR--GTIGYIAPELIS-----RNFGTVSCKSDVYGFG 163
++D GLA H D + I+ GT Y+APE++ ++F + ++D+Y G
Sbjct: 148 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFK-RADIYAMG 206
Query: 164 MVLLEMT 170
+V E+
Sbjct: 207 LVFWEIA 213
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 79/172 (45%), Gaps = 16/172 (9%)
Query: 5 SKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQ 64
S+ E+++ E+ + H N+V+LL + ++ EF G++D + E +
Sbjct: 47 SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE---R 103
Query: 65 SCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPK 124
+ ++ V T + YLH D I+H D+K NIL + ++DFG++
Sbjct: 104 PLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVS----A 156
Query: 125 ENDFVSISATRGTIG---YIAPELI---SRNFGTVSCKSDVYGFGMVLLEMT 170
+N I IG ++APE++ + K+DV+ G+ L+EM
Sbjct: 157 KNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMA 208
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 20/167 (11%)
Query: 11 EFINEVSTIGRIHHVNVVQLLG-FCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+ I E+ + + +V G F S+G + ++ E M GSLD+ + K R +
Sbjct: 112 QIIRELQVLHECNSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQ-VLKKAGR---IPEQ 166
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK--FHPKEND 127
L +V+ G+ YL I+H D+KP NIL++ + DFG++ N
Sbjct: 167 ILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 224
Query: 128 FVSISATRGTIGYIAPELISRNFGT-VSCKSDVYGFGMVLLEMTGGR 173
FV GT Y++PE R GT S +SD++ G+ L+EM GR
Sbjct: 225 FV------GTRSYMSPE---RLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 18/166 (10%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
+ I E+ + + +V G + ++ E M GSLD+ + K R +
Sbjct: 77 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ-VLKKAGR---IPEQI 132
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK--FHPKENDF 128
L +V+ G+ YL I+H D+KP NIL++ + DFG++ N F
Sbjct: 133 LGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 190
Query: 129 VSISATRGTIGYIAPELISRNFGT-VSCKSDVYGFGMVLLEMTGGR 173
V GT Y++PE R GT S +SD++ G+ L+EM GR
Sbjct: 191 V------GTRSYMSPE---RLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 78/179 (43%), Gaps = 34/179 (18%)
Query: 33 FCSEGSKRAL--VYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAH---GIEYLHN 87
FC+ +K L V E++ G L HI QSC L A G+++LH+
Sbjct: 84 FCTFQTKENLFFVMEYLNGGDLMYHI-------QSCHKFDLSRATFYAAEIILGLQFLHS 136
Query: 88 GCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFH----PKENDFVSISATRGTIGYIAP 143
I++ D+K NILLD + ++DFG+ K + K N F GT YIAP
Sbjct: 137 KG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFC------GTPDYIAP 187
Query: 144 ELISRNFGTVSCKSDVYGFGMVLLEMTGGR-------RNSNLKATRSSKAYFPSWVSDQ 195
E++ + D + FG++L EM G+ + R ++P W+ +
Sbjct: 188 EILLGQ--KYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKE 244
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 32/187 (17%)
Query: 3 ENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKR-------ALVYEFMPNGSLDRH 55
E S F E V + H N+ LGF + +K LV ++ +GSL
Sbjct: 45 ERSWFREAEIYQTVM----LRHENI---LGFIAADNKDNGTWTQLWLVSDYHEHGSL--- 94
Query: 56 IFPKESRGQSCSWEKLHEVASGTAHGIEYLH-----NGCDVCILHLDIKPHNILLDHNFV 110
F +R + + E + ++A TA G+ +LH I H D+K NIL+ N
Sbjct: 95 -FDYLNR-YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT 152
Query: 111 PNVSDFGLAKFHPKENDFVSISATR--GTIGYIAPELIS-----RNFGTVSCKSDVYGFG 163
++D GLA H D + I+ GT Y+APE++ ++F + ++D+Y G
Sbjct: 153 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFK-RADIYAMG 211
Query: 164 MVLLEMT 170
+V E+
Sbjct: 212 LVFWEIA 218
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 32/187 (17%)
Query: 3 ENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKR-------ALVYEFMPNGSLDRH 55
E S F E V + H N+ LGF + +K LV ++ +GSL
Sbjct: 78 ERSWFREAEIYQTVM----LRHENI---LGFIAADNKDNGTWTQLWLVSDYHEHGSL--- 127
Query: 56 IFPKESRGQSCSWEKLHEVASGTAHGIEYLH-----NGCDVCILHLDIKPHNILLDHNFV 110
F +R + + E + ++A TA G+ +LH I H D+K NIL+ N
Sbjct: 128 -FDYLNR-YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT 185
Query: 111 PNVSDFGLAKFHPKENDFVSISATR--GTIGYIAPELIS-----RNFGTVSCKSDVYGFG 163
++D GLA H D + I+ GT Y+APE++ ++F + ++D+Y G
Sbjct: 186 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFK-RADIYAMG 244
Query: 164 MVLLEMT 170
+V E+
Sbjct: 245 LVFWEIA 251
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 13/163 (7%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
I E+S + ++H N+V+LL +K LV+EF+ S+D F S +
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIK 107
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFH--PKENDFVS 130
G+ + H+ +LH D+KP N+L++ ++DFGLA+ P
Sbjct: 108 SYLFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE 164
Query: 131 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T+ Y APE++ S D++ G + EM R
Sbjct: 165 VV----TLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 79/182 (43%), Gaps = 24/182 (13%)
Query: 3 ENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE-------GSKRALVYEFMPNGSLDRH 55
E S F E N V + H N+ LGF + ++ L+ + GSL +
Sbjct: 44 EKSWFRETELYNTVM----LRHENI---LGFIASDMTSRHSSTQLWLITHYHEMGSLYDY 96
Query: 56 IFPKESRGQSCSWEKLHEVASGTAH-GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVS 114
+ SC + +ASG AH IE I H D+K NIL+ N ++
Sbjct: 97 LQLTTLDTVSCL-RIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIA 155
Query: 115 DFGLAKFHPKENDFVSI--SATRGTIGYIAPELISRNFGTVSC-----KSDVYGFGMVLL 167
D GLA H + + + + + GT Y+APE++ V C + D++ FG+VL
Sbjct: 156 DLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETI-QVDCFDSYKRVDIWAFGLVLW 214
Query: 168 EM 169
E+
Sbjct: 215 EV 216
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 79/182 (43%), Gaps = 24/182 (13%)
Query: 3 ENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE-------GSKRALVYEFMPNGSLDRH 55
E S F E N V + H N+ LGF + ++ L+ + GSL +
Sbjct: 44 EKSWFRETELYNTVM----LRHENI---LGFIASDMTSRHSSTQLWLITHYHEMGSLYDY 96
Query: 56 IFPKESRGQSCSWEKLHEVASGTAH-GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVS 114
+ SC + +ASG AH IE I H D+K NIL+ N ++
Sbjct: 97 LQLTTLDTVSCL-RIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIA 155
Query: 115 DFGLAKFHPKENDFVSI--SATRGTIGYIAPELISRNFGTVSC-----KSDVYGFGMVLL 167
D GLA H + + + + + GT Y+APE++ V C + D++ FG+VL
Sbjct: 156 DLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETI-QVDCFDSYKRVDIWAFGLVLW 214
Query: 168 EM 169
E+
Sbjct: 215 EV 216
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 79/182 (43%), Gaps = 24/182 (13%)
Query: 3 ENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE-------GSKRALVYEFMPNGSLDRH 55
E S F E N V + H N+ LGF + ++ L+ + GSL +
Sbjct: 73 EKSWFRETELYNTV----MLRHENI---LGFIASDMTSRHSSTQLWLITHYHEMGSLYDY 125
Query: 56 IFPKESRGQSCSWEKLHEVASGTAH-GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVS 114
+ SC + +ASG AH IE I H D+K NIL+ N ++
Sbjct: 126 LQLTTLDTVSCL-RIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIA 184
Query: 115 DFGLAKFHPKENDFVSI--SATRGTIGYIAPELISRNFGTVSC-----KSDVYGFGMVLL 167
D GLA H + + + + + GT Y+APE++ V C + D++ FG+VL
Sbjct: 185 DLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETI-QVDCFDSYKRVDIWAFGLVLW 243
Query: 168 EM 169
E+
Sbjct: 244 EV 245
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 13/163 (7%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
I E+S + ++H N+V+LL +K LV+EF+ S+D F S +
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIK 109
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFH--PKENDFVS 130
G+ + H+ +LH D+KP N+L++ ++DFGLA+ P
Sbjct: 110 SYLFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE 166
Query: 131 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T+ Y APE++ S D++ G + EM R
Sbjct: 167 VV----TLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 18/166 (10%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
+ I E+ + + +V G + ++ E M GSLD+ + K R +
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ-VLKKAGR---IPEQI 105
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK--FHPKENDF 128
L +V+ G+ YL I+H D+KP NIL++ + DFG++ N F
Sbjct: 106 LGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 163
Query: 129 VSISATRGTIGYIAPELISRNFGT-VSCKSDVYGFGMVLLEMTGGR 173
V GT Y++PE R GT S +SD++ G+ L+EM GR
Sbjct: 164 V------GTRSYMSPE---RLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 18/166 (10%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
+ I E+ + + +V G + ++ E M GSLD+ + K R +
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ-VLKKAGR---IPEQI 105
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK--FHPKENDF 128
L +V+ G+ YL I+H D+KP NIL++ + DFG++ N F
Sbjct: 106 LGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 163
Query: 129 VSISATRGTIGYIAPELISRNFGT-VSCKSDVYGFGMVLLEMTGGR 173
V GT Y++PE R GT S +SD++ G+ L+EM GR
Sbjct: 164 V------GTRSYMSPE---RLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 18/166 (10%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
+ I E+ + + +V G + ++ E M GSLD+ + K R +
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ-VLKKAGR---IPEQI 105
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK--FHPKENDF 128
L +V+ G+ YL I+H D+KP NIL++ + DFG++ N F
Sbjct: 106 LGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 163
Query: 129 VSISATRGTIGYIAPELISRNFGT-VSCKSDVYGFGMVLLEMTGGR 173
V GT Y++PE R GT S +SD++ G+ L+EM GR
Sbjct: 164 V------GTRSYMSPE---RLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 68/166 (40%), Gaps = 21/166 (12%)
Query: 15 EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEV 74
E + ++H +V L + LV M G + HI+ + +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 75 ASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISAT 134
+ G+E+LH I++ D+KP N+LLD + +SD GLA V + A
Sbjct: 295 TAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA---------VELKAG 342
Query: 135 R-------GTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ GT G++APEL+ S D + G+ L EM R
Sbjct: 343 QTKTKGYAGTPGFMAPELLLGEEYDFSV--DYFALGVTLYEMIAAR 386
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 18/166 (10%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
+ I E+ + + +V G + ++ E M GSLD+ + K R +
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ-VLKKAGR---IPEQI 105
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK--FHPKENDF 128
L +V+ G+ YL I+H D+KP NIL++ + DFG++ N F
Sbjct: 106 LGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 163
Query: 129 VSISATRGTIGYIAPELISRNFGT-VSCKSDVYGFGMVLLEMTGGR 173
V GT Y++PE R GT S +SD++ G+ L+EM GR
Sbjct: 164 V------GTRSYMSPE---RLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 18/166 (10%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
+ I E+ + + +V G + ++ E M GSLD+ + K R +
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ-VLKKAGR---IPEQI 105
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK--FHPKENDF 128
L +V+ G+ YL I+H D+KP NIL++ + DFG++ N F
Sbjct: 106 LGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 163
Query: 129 VSISATRGTIGYIAPELISRNFGT-VSCKSDVYGFGMVLLEMTGGR 173
V GT Y++PE R GT S +SD++ G+ L+EM GR
Sbjct: 164 V------GTRSYMSPE---RLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 10/160 (6%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E+F+ E T+ + H ++V+L+G +E ++ E G L + + R S
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL---QVRKFSLDLA 491
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
L A + + YL + +H DI N+L+ + DFGL+++ +++ +
Sbjct: 492 SLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYM-EDSTYY 547
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
S + I ++APE I NF + SDV+ FG+ + E+
Sbjct: 548 KASKGKLPIKWMAPESI--NFRRFTSASDVWMFGVCMWEI 585
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 68/166 (40%), Gaps = 21/166 (12%)
Query: 15 EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEV 74
E + ++H +V L + LV M G + HI+ + +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 75 ASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISAT 134
+ G+E+LH I++ D+KP N+LLD + +SD GLA V + A
Sbjct: 295 TAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA---------VELKAG 342
Query: 135 R-------GTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ GT G++APEL+ S D + G+ L EM R
Sbjct: 343 QTKTKGYAGTPGFMAPELLLGEEYDFSV--DYFALGVTLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 68/166 (40%), Gaps = 21/166 (12%)
Query: 15 EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEV 74
E + ++H +V L + LV M G + HI+ + +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 75 ASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISAT 134
+ G+E+LH I++ D+KP N+LLD + +SD GLA V + A
Sbjct: 295 TAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA---------VELKAG 342
Query: 135 R-------GTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ GT G++APEL+ S D + G+ L EM R
Sbjct: 343 QTKTKGYAGTPGFMAPELLLGEEYDFSV--DYFALGVTLYEMIAAR 386
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 68/166 (40%), Gaps = 21/166 (12%)
Query: 15 EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEV 74
E + ++H +V L + LV M G + HI+ + +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 75 ASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISAT 134
+ G+E+LH I++ D+KP N+LLD + +SD GLA V + A
Sbjct: 295 TAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA---------VELKAG 342
Query: 135 R-------GTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ GT G++APEL+ S D + G+ L EM R
Sbjct: 343 QTKTKGYAGTPGFMAPELLLGEEYDFSV--DYFALGVTLYEMIAAR 386
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 12/133 (9%)
Query: 42 LVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPH 101
V E+ G L H+ SR + S ++ + ++YLH+ +V ++ D+K
Sbjct: 225 FVMEYANGGELFFHL----SRERVFSEDRARFYGAEIVSALDYLHSEKNV--VYRDLKLE 278
Query: 102 NILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN-FGTVSCKSDVY 160
N++LD + ++DFGL K K D ++ GT Y+APE++ N +G D +
Sbjct: 279 NLMLDKDGHIKITDFGLCKEGIK--DGATMKTFCGTPEYLAPEVLEDNDYGRA---VDWW 333
Query: 161 GFGMVLLEMTGGR 173
G G+V+ EM GR
Sbjct: 334 GLGVVMYEMMCGR 346
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 12/133 (9%)
Query: 42 LVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPH 101
V E+ G L H+ SR + S ++ + ++YLH+ +V ++ D+K
Sbjct: 228 FVMEYANGGELFFHL----SRERVFSEDRARFYGAEIVSALDYLHSEKNV--VYRDLKLE 281
Query: 102 NILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN-FGTVSCKSDVY 160
N++LD + ++DFGL K K D ++ GT Y+APE++ N +G D +
Sbjct: 282 NLMLDKDGHIKITDFGLCKEGIK--DGATMKTFCGTPEYLAPEVLEDNDYGRA---VDWW 336
Query: 161 GFGMVLLEMTGGR 173
G G+V+ EM GR
Sbjct: 337 GLGVVMYEMMCGR 349
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 25/177 (14%)
Query: 10 EEFINEVSTIGRI-HHVNVVQLLG-FCSEG-----SKRALVYEFMPNGSLDRHIFPKESR 62
EE E++ + + HH N+ G F + + LV EF GS+ I K ++
Sbjct: 65 EEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLI--KNTK 122
Query: 63 GQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFG----L 118
G + E + + G+ +LH ++H DIK N+LL N + DFG L
Sbjct: 123 GNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQL 179
Query: 119 AKFHPKENDFVSISATRGTIGYIAPELISRNF---GTVSCKSDVYGFGMVLLEMTGG 172
+ + N F+ GT ++APE+I+ + T KSD++ G+ +EM G
Sbjct: 180 DRTVGRRNTFI------GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 82/175 (46%), Gaps = 18/175 (10%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRA------LVYEFMPNGSLDRHIFPKESR- 62
EEF+ E + + H +V +L+G + ++ FM +G D H F SR
Sbjct: 70 EEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHG--DLHAFLLASRI 127
Query: 63 GQS---CSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLA 119
G++ + L A G+EYL + +H D+ N +L + V+DFGL+
Sbjct: 128 GENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTVCVADFGLS 184
Query: 120 KFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLE-MTGGR 173
+ + + A++ + ++A E ++ N TV SDV+ FG+ + E MT G+
Sbjct: 185 RKIYSGDYYRQGCASKLPVKWLALESLADNLYTV--HSDVWAFGVTMWEIMTRGQ 237
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 13/133 (9%)
Query: 42 LVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPH 101
V E+ G L H+ SR + + E+ + +EYLH+ +++ DIK
Sbjct: 82 FVMEYANGGELFFHL----SRERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLE 134
Query: 102 NILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN-FGTVSCKSDVY 160
N++LD + ++DFGL K +D ++ GT Y+APE++ N +G D +
Sbjct: 135 NLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYGRA---VDWW 189
Query: 161 GFGMVLLEMTGGR 173
G G+V+ EM GR
Sbjct: 190 GLGVVMYEMMCGR 202
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 13/133 (9%)
Query: 42 LVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPH 101
V E+ G L H+ SR + + E+ + +EYLH+ +++ DIK
Sbjct: 85 FVMEYANGGELFFHL----SRERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLE 137
Query: 102 NILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN-FGTVSCKSDVY 160
N++LD + ++DFGL K +D ++ GT Y+APE++ N +G D +
Sbjct: 138 NLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDNDYGRA---VDWW 192
Query: 161 GFGMVLLEMTGGR 173
G G+V+ EM GR
Sbjct: 193 GLGVVMYEMMCGR 205
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 17/168 (10%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFC--SEGSKRALVYEFMPNGSLDRHIFPKESRGQS 65
E F+ E + ++H NV+ L+G EG L+ +M +G L + I S ++
Sbjct: 65 QVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL-PYMCHGDLLQFI---RSPQRN 120
Query: 66 CSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKE 125
+ + L A G+EYL + +H D+ N +LD +F V+DFGLA+ +
Sbjct: 121 PTVKDLISFGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLAR-DILD 176
Query: 126 NDFVSISA---TRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 169
++ S+ R + + A E L + F T KSDV+ FG++L E+
Sbjct: 177 REYYSVQQHRHARLPVKWTALESLQTYRFTT---KSDVWSFGVLLWEL 221
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 13/133 (9%)
Query: 42 LVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPH 101
V E+ G L H+ SR + + E+ + +EYLH+ +++ DIK
Sbjct: 82 FVMEYANGGELFFHL----SRERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLE 134
Query: 102 NILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN-FGTVSCKSDVY 160
N++LD + ++DFGL K +D ++ GT Y+APE++ N +G D +
Sbjct: 135 NLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDNDYGRA---VDWW 189
Query: 161 GFGMVLLEMTGGR 173
G G+V+ EM GR
Sbjct: 190 GLGVVMYEMMCGR 202
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 83/199 (41%), Gaps = 43/199 (21%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGS-LDR-HIFPKESRG-- 63
E EV + ++HH N+ +L + LV E G LD+ ++F +S G
Sbjct: 71 DVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKC 130
Query: 64 -------QSCSWEKLHEVA-SGTAHG------------------------IEYLHNGCDV 91
Q C + +E A +G+ HG + YLHN
Sbjct: 131 AMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ--- 187
Query: 92 CILHLDIKPHNILLDHN--FVPNVSDFGLAKFHPKEN--DFVSISATRGTIGYIAPELIS 147
I H DIKP N L N F + DFGL+K K N ++ ++ GT ++APE+++
Sbjct: 188 GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLN 247
Query: 148 RNFGTVSCKSDVYGFGMVL 166
+ K D + G++L
Sbjct: 248 TTNESYGPKCDAWSAGVLL 266
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 27/210 (12%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E++P G + H+ R S
Sbjct: 72 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEP 127
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK K +
Sbjct: 128 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWT 183
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG-------RRNSNLKAT 181
GT Y+APE+I S+ + D + G+++ EM G + +
Sbjct: 184 LC----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 236
Query: 182 RSSKAYFPSWVSDQLNKGGNLELRNVTEIE 211
S K FPS S L LRN+ +++
Sbjct: 237 VSGKVRFPSHFSSDLKDL----LRNLLQVD 262
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 77/183 (42%), Gaps = 22/183 (12%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
S ++ EV + ++H N+V+L LV E+ G + ++ + +
Sbjct: 56 SLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA 115
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKEND 127
K ++ S ++Y H I+H D+K N+LLD + ++DFG + N+
Sbjct: 116 RAKFRQIVSA----VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS------NE 162
Query: 128 FV---SISATRGTIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLEMTGGR---RNSNLKA 180
F + A G Y APEL + + + DV+ G++L + G NLK
Sbjct: 163 FTFGNKLDAFCGAPPYAAPELFQGKKYD--GPEVDVWSLGVILYTLVSGSLPFDGQNLKE 220
Query: 181 TRS 183
R
Sbjct: 221 LRE 223
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 13/133 (9%)
Query: 42 LVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPH 101
V E+ G L H+ SR + + E+ + +EYLH+ +++ DIK
Sbjct: 82 FVMEYANGGELFFHL----SRERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLE 134
Query: 102 NILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN-FGTVSCKSDVY 160
N++LD + ++DFGL K +D ++ GT Y+APE++ N +G D +
Sbjct: 135 NLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDNDYGRA---VDWW 189
Query: 161 GFGMVLLEMTGGR 173
G G+V+ EM GR
Sbjct: 190 GLGVVMYEMMCGR 202
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 16/164 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E++P G + H+ R S
Sbjct: 87 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEP 142
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK +
Sbjct: 143 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 199
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT Y+APE+I S+ + D + G+++ EM G
Sbjct: 200 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 235
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 81/188 (43%), Gaps = 18/188 (9%)
Query: 15 EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEV 74
E + + + H +V L+ G K L+ E++ G L + + + + L E+
Sbjct: 71 ERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEI 130
Query: 75 ASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISAT 134
+ H LH I++ D+KP NI+L+H ++DFGL K +D
Sbjct: 131 SMALGH----LHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHTF 181
Query: 135 RGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM-------TGGRRNSNLKATRSSKAY 187
GTI Y+APE++ R+ + D + G ++ +M TG R + K
Sbjct: 182 CGTIEYMAPEILMRSGHNRAV--DWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLN 239
Query: 188 FPSWVSDQ 195
P +++ +
Sbjct: 240 LPPYLTQE 247
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 27/210 (12%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E++P G + H+ R S
Sbjct: 79 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEP 134
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK +
Sbjct: 135 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 191
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG-------RRNSNLKAT 181
GT Y+APE+I S+ + D + G+++ EM G + +
Sbjct: 192 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 243
Query: 182 RSSKAYFPSWVSDQLNKGGNLELRNVTEIE 211
S K FPS S L LRN+ +++
Sbjct: 244 VSGKVRFPSHFSSDLKDL----LRNLLQVD 269
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 16/164 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E++P G + H+ R S
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEP 141
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK +
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT Y+APE+I S+ + D + G+++ EM G
Sbjct: 199 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 16/164 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E++P G + H+ R S
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEP 141
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK +
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT Y+APE+I S+ + D + G+++ EM G
Sbjct: 199 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEF---MPNGSLDRHIFPKE 60
S+ A+ E+ + + H NV+ LL + S Y+F MP D ++
Sbjct: 80 QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDL----QK 135
Query: 61 SRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK 120
G S EK+ + G++Y+H+ ++H D+KP N+ ++ + + DFGLA+
Sbjct: 136 IMGMEFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR 192
Query: 121 FHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
E ++ T Y APE+I ++ + D++ G ++ EM G+
Sbjct: 193 HADAE-----MTGYVVTRWYRAPEVI-LSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 27/210 (12%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E++P G + H+ R S
Sbjct: 87 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEP 142
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK +
Sbjct: 143 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 199
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG-------RRNSNLKAT 181
GT Y+APE+I S+ + D + G+++ EM G + +
Sbjct: 200 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
Query: 182 RSSKAYFPSWVSDQLNKGGNLELRNVTEIE 211
S K FPS S L LRN+ +++
Sbjct: 252 VSGKVRFPSHFSSDLKD----LLRNLLQVD 277
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 16/164 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E++P G + H+ R S
Sbjct: 87 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEP 142
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK K +
Sbjct: 143 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWT 198
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT Y+APE+I S+ + D + G+++ EM G
Sbjct: 199 LC----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 235
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 16/164 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E++P G + H+ R S
Sbjct: 87 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEP 142
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK +
Sbjct: 143 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 199
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT Y+APE+I S+ + D + G+++ EM G
Sbjct: 200 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 27/210 (12%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E++P G + H+ R S
Sbjct: 87 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEP 142
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK +
Sbjct: 143 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 199
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG-------RRNSNLKAT 181
GT Y+APE+I S+ + D + G+++ EM G + +
Sbjct: 200 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
Query: 182 RSSKAYFPSWVSDQLNKGGNLELRNVTEIE 211
S K FPS S L LRN+ +++
Sbjct: 252 VSGKVRFPSHFSSDLKD----LLRNLLQVD 277
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 16/164 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E++P G + H+ R S
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEP 141
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK +
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT Y+APE+I S+ + D + G+++ EM G
Sbjct: 199 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 13/133 (9%)
Query: 42 LVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPH 101
V E+ G L H+ SR + + E+ + +EYLH+ +++ DIK
Sbjct: 82 FVMEYANGGELFFHL----SRERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLE 134
Query: 102 NILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN-FGTVSCKSDVY 160
N++LD + ++DFGL K +D ++ GT Y+APE++ N +G D +
Sbjct: 135 NLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYGRA---VDWW 189
Query: 161 GFGMVLLEMTGGR 173
G G+V+ EM GR
Sbjct: 190 GLGVVMYEMMCGR 202
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 73/170 (42%), Gaps = 12/170 (7%)
Query: 7 FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSC 66
S E+ E S + H ++V+LL S +V+EFM L I + G
Sbjct: 70 LSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVY 129
Query: 67 SWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILL--DHNFVP-NVSDFGLAKFHP 123
S + Y H D I+H D+KPH +LL N P + FG+A
Sbjct: 130 SEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA-IQL 185
Query: 124 KENDFVSISATRGTIGYIAPELISRN-FGTVSCKSDVYGFGMVLLEMTGG 172
E+ V+ GT ++APE++ R +G DV+G G++L + G
Sbjct: 186 GESGLVA-GGRVGTPHFMAPEVVKREPYGK---PVDVWGCGVILFILLSG 231
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 27/210 (12%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E++P G + H+ R S
Sbjct: 107 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEP 162
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK +
Sbjct: 163 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 219
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG-------RRNSNLKAT 181
GT Y+APE+I S+ + D + G+++ EM G + +
Sbjct: 220 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 271
Query: 182 RSSKAYFPSWVSDQLNKGGNLELRNVTEIE 211
S K FPS S L LRN+ +++
Sbjct: 272 VSGKVRFPSHFSSDLKD----LLRNLLQVD 297
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 16/164 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E++P G + H+ R S
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEP 141
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK +
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT Y+APE+I S+ + D + G+++ EM G
Sbjct: 199 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 27/210 (12%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E++P G + H+ R S
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEP 141
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK +
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG-------RRNSNLKAT 181
GT Y+APE+I S+ + D + G+++ EM G + +
Sbjct: 199 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 182 RSSKAYFPSWVSDQLNKGGNLELRNVTEIE 211
S K FPS S L LRN+ +++
Sbjct: 251 VSGKVRFPSHFSSDLKD----LLRNLLQVD 276
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 16/164 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E++P G + H+ R S
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEP 141
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK +
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT Y+APE+I S+ + D + G+++ EM G
Sbjct: 199 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 81/188 (43%), Gaps = 18/188 (9%)
Query: 15 EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEV 74
E + + + H +V L+ G K L+ E++ G L + + + + L E+
Sbjct: 71 ERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEI 130
Query: 75 ASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISAT 134
+ H LH I++ D+KP NI+L+H ++DFGL K +D
Sbjct: 131 SMALGH----LHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHXF 181
Query: 135 RGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM-------TGGRRNSNLKATRSSKAY 187
GTI Y+APE++ R+ + D + G ++ +M TG R + K
Sbjct: 182 CGTIEYMAPEILMRSGHNRAV--DWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLN 239
Query: 188 FPSWVSDQ 195
P +++ +
Sbjct: 240 LPPYLTQE 247
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 13/133 (9%)
Query: 42 LVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPH 101
V E+ G L H+ SR + + E+ + +EYLH+ +++ DIK
Sbjct: 87 FVMEYANGGELFFHL----SRERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLE 139
Query: 102 NILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN-FGTVSCKSDVY 160
N++LD + ++DFGL K +D ++ GT Y+APE++ N +G D +
Sbjct: 140 NLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYGRA---VDWW 194
Query: 161 GFGMVLLEMTGGR 173
G G+V+ EM GR
Sbjct: 195 GLGVVMYEMMCGR 207
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 16/164 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E+ P G + H+ R S
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFSEP 141
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+++D V+DFGLAK +
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXL 198
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT Y+APE+I S+ + D + G+++ EM G
Sbjct: 199 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 82/187 (43%), Gaps = 18/187 (9%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
E+ + H ++++L S + +V E++ G L +I K R + +L +
Sbjct: 60 REIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYIC-KHGRVEEMEARRLFQ 118
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISA 133
++Y H ++H D+KP N+LLD + ++DFGL+ + +F+ S
Sbjct: 119 ---QILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRTSC 171
Query: 134 TRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSN-------LKATRSSKA 186
G+ Y APE+IS + D++ G++L + G + K R
Sbjct: 172 --GSPNYAAPEVISGRL-YAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVF 228
Query: 187 YFPSWVS 193
Y P +++
Sbjct: 229 YIPEYLN 235
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 73/170 (42%), Gaps = 12/170 (7%)
Query: 7 FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSC 66
S E+ E S + H ++V+LL S +V+EFM L I + G
Sbjct: 68 LSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVY 127
Query: 67 SWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILL--DHNFVP-NVSDFGLAKFHP 123
S + Y H D I+H D+KPH +LL N P + FG+A
Sbjct: 128 SEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA-IQL 183
Query: 124 KENDFVSISATRGTIGYIAPELISRN-FGTVSCKSDVYGFGMVLLEMTGG 172
E+ V+ GT ++APE++ R +G DV+G G++L + G
Sbjct: 184 GESGLVA-GGRVGTPHFMAPEVVKREPYGK---PVDVWGCGVILFILLSG 229
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 13/133 (9%)
Query: 42 LVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPH 101
V E+ G L H+ SR + + E+ + +EYLH+ +++ DIK
Sbjct: 82 FVMEYANGGELFFHL----SRERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLE 134
Query: 102 NILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN-FGTVSCKSDVY 160
N++LD + ++DFGL K +D ++ GT Y+APE++ N +G D +
Sbjct: 135 NLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYGRA---VDWW 189
Query: 161 GFGMVLLEMTGGR 173
G G+V+ EM GR
Sbjct: 190 GLGVVMYEMMCGR 202
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 16/164 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E+ P G + H+ R S
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFSEP 141
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+++D V+DFGLAK +
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXL 198
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT Y+APE+I S+ + D + G+++ EM G
Sbjct: 199 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 23/222 (10%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG 63
S + +E ++E + + + +V +LLG C + + L+ + MP G L ++ +E +
Sbjct: 56 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV--REHKD 112
Query: 64 QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHP 123
S + L A G+ YL D ++H D+ N+L+ ++DFGLAK
Sbjct: 113 NIGS-QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKATRS 183
E + I ++A E I T +SDV+ +G+ + E+ T
Sbjct: 169 AEEKEYHAEGGKVPIKWMALESILHRIYT--HQSDVWSYGVTVWELM----------TFG 216
Query: 184 SKAY--FP-SWVSDQLNKGGNLELRNVTEIE-SMIARKLCVI 221
SK Y P S +S L KG L + I+ MI RK +I
Sbjct: 217 SKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWMI 258
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 16/164 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E++P G + H+ R S
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEP 141
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK +
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL 198
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT Y+APE+I S+ + D + G+++ EM G
Sbjct: 199 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 23/222 (10%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG 63
S + +E ++E + + + +V +LLG C + + L+ + MP G L ++ +E +
Sbjct: 59 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV--REHKD 115
Query: 64 QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHP 123
S + L A G+ YL D ++H D+ N+L+ ++DFGLAK
Sbjct: 116 NIGS-QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 171
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKATRS 183
E + I ++A E I T +SDV+ +G+ + E+ T
Sbjct: 172 AEEKEYHAEGGKVPIKWMALESILHRIYT--HQSDVWSYGVTVWELM----------TFG 219
Query: 184 SKAY--FP-SWVSDQLNKGGNLELRNVTEIE-SMIARKLCVI 221
SK Y P S +S L KG L + I+ MI RK +I
Sbjct: 220 SKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWMI 261
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 23/222 (10%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG 63
S + +E ++E + + + +V +LLG C + + L+ + MP G L ++ +E +
Sbjct: 66 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV--REHKD 122
Query: 64 QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHP 123
S + L A G+ YL D ++H D+ N+L+ ++DFGLAK
Sbjct: 123 NIGS-QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 178
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKATRS 183
E + I ++A E I T +SDV+ +G+ + E+ T
Sbjct: 179 AEEKEYHAEGGKVPIKWMALESILHRIYT--HQSDVWSYGVTVWELM----------TFG 226
Query: 184 SKAY--FP-SWVSDQLNKGGNLELRNVTEIE-SMIARKLCVI 221
SK Y P S +S L KG L + I+ MI RK +I
Sbjct: 227 SKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWMI 268
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 12/133 (9%)
Query: 42 LVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPH 101
V E+ G L H+ SR + S ++ + ++YLH+ +V ++ D+K
Sbjct: 86 FVMEYANGGELFFHL----SRERVFSEDRARFYGAEIVSALDYLHSEKNV--VYRDLKLE 139
Query: 102 NILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN-FGTVSCKSDVY 160
N++LD + ++DFGL K K D ++ GT Y+APE++ N +G D +
Sbjct: 140 NLMLDKDGHIKITDFGLCKEGIK--DGATMKXFCGTPEYLAPEVLEDNDYGRA---VDWW 194
Query: 161 GFGMVLLEMTGGR 173
G G+V+ EM GR
Sbjct: 195 GLGVVMYEMMCGR 207
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 23/175 (13%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGS-LDRHIFPKESRGQSCSWEKLH 72
E++ + + V + G +GSK ++ E++ GS LD R ++
Sbjct: 70 QEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLL------RAGPFDEFQIA 123
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLA----KFHPKENDF 128
+ G++YLH+ + H DIK N+LL ++DFG+A K N F
Sbjct: 124 TMLKEILKGLDYLHSEKKI---HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTF 180
Query: 129 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR-RNSNLKATR 182
V GT ++APE+I ++ K+D++ G+ +E+ G NS++ R
Sbjct: 181 V------GTPFWMAPEVIQQS--AYDSKADIWSLGITAIELAKGEPPNSDMHPMR 227
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEF---MPNGSLDRHIFPKE 60
S+ A+ E+ + + H NV+ LL + S Y+F MP D ++
Sbjct: 62 QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDL----QK 117
Query: 61 SRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK 120
G S EK+ + G++Y+H+ ++H D+KP N+ ++ + + DFGLA+
Sbjct: 118 IMGLKFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR 174
Query: 121 FHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
E ++ T Y APE+I ++ + D++ G ++ EM G+
Sbjct: 175 HADAE-----MTGYVVTRWYRAPEVI-LSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 12/133 (9%)
Query: 42 LVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPH 101
V E+ G L H+ SR + S ++ + ++YLH+ +V ++ D+K
Sbjct: 85 FVMEYANGGELFFHL----SRERVFSEDRARFYGAEIVSALDYLHSEKNV--VYRDLKLE 138
Query: 102 NILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN-FGTVSCKSDVY 160
N++LD + ++DFGL K K D ++ GT Y+APE++ N +G D +
Sbjct: 139 NLMLDKDGHIKITDFGLCKEGIK--DGATMKXFCGTPEYLAPEVLEDNDYGRA---VDWW 193
Query: 161 GFGMVLLEMTGGR 173
G G+V+ EM GR
Sbjct: 194 GLGVVMYEMMCGR 206
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 12/133 (9%)
Query: 42 LVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPH 101
V E+ G L H+ SR + S ++ + ++YLH+ +V ++ D+K
Sbjct: 87 FVMEYANGGELFFHL----SRERVFSEDRARFYGAEIVSALDYLHSEKNV--VYRDLKLE 140
Query: 102 NILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN-FGTVSCKSDVY 160
N++LD + ++DFGL K K D ++ GT Y+APE++ N +G D +
Sbjct: 141 NLMLDKDGHIKITDFGLCKEGIK--DGATMKXFCGTPEYLAPEVLEDNDYGRA---VDWW 195
Query: 161 GFGMVLLEMTGGR 173
G G+V+ EM GR
Sbjct: 196 GLGVVMYEMMCGR 208
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 82/197 (41%), Gaps = 26/197 (13%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
S ++ EV + ++H N+V+L L+ E+ G + ++ + +
Sbjct: 57 SLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEA 116
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKEND 127
K ++ S ++Y H I+H D+K N+LLD + ++DFG + N+
Sbjct: 117 RSKFRQIVSA----VQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFS------NE 163
Query: 128 FV---SISATRGTIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLEMTGGR---RNSNLKA 180
F + A G Y APEL + + + DV+ G++L + G NLK
Sbjct: 164 FTVGGKLDAFCGAPPYAAPELFQGKKYD--GPEVDVWSLGVILYTLVSGSLPFDGQNLKE 221
Query: 181 TRS----SKAYFPSWVS 193
R K P ++S
Sbjct: 222 LRERVLRGKYRIPFYMS 238
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 13 INEVSTIGRIH---HVNVVQLLGFCS-----EGSKRALVYEFMPNGSLDRHIFPKESRGQ 64
I EV+ + + H NVV+L C+ +K LV+E + D + +
Sbjct: 59 IREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ---DLTTYLDKVPEP 115
Query: 65 SCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPK 124
E + ++ G+++LH+ ++H D+KP NIL+ + ++DFGLA+ +
Sbjct: 116 GVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSF 172
Query: 125 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ S+ T+ Y APE++ ++ + + D++ G + EM
Sbjct: 173 QMALTSVVV---TLWYRAPEVLLQS--SYATPVDLWSVGCIFAEM 212
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 27/184 (14%)
Query: 1 MLENSKFSAEEFINEVSTIGRIHHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SL 52
+L++ +F E + + ++ H N+V+L F S G K+ +VY +++P +
Sbjct: 53 VLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRV 108
Query: 53 DRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNF-VP 111
RH + + + + KL+ + Y+H+ I H DIKP N+LLD + V
Sbjct: 109 ARH-YSRAKQTLPVIYVKLY--MYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVL 162
Query: 112 NVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEM 169
+ DFG AK + VS +R Y APELI FG S DV+ G VL E+
Sbjct: 163 KLCDFGSAKQLVRGEPNVSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 216
Query: 170 TGGR 173
G+
Sbjct: 217 LLGQ 220
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 13 INEVSTIGRIH---HVNVVQLLGFCS-----EGSKRALVYEFMPNGSLDRHIFPKESRGQ 64
I EV+ + + H NVV+L C+ +K LV+E + D + +
Sbjct: 59 IREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ---DLTTYLDKVPEP 115
Query: 65 SCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPK 124
E + ++ G+++LH+ ++H D+KP NIL+ + ++DFGLA+ +
Sbjct: 116 GVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSF 172
Query: 125 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ S+ T+ Y APE++ ++ + + D++ G + EM
Sbjct: 173 QMALTSVVV---TLWYRAPEVLLQS--SYATPVDLWSVGCIFAEM 212
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 22/183 (12%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
S ++ EV + ++H N+V+L LV E+ G + ++ + +
Sbjct: 56 SLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA 115
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK---FHPK 124
K ++ S ++Y H I+H D+K N+LLD + ++DFG + F K
Sbjct: 116 RAKFRQIVSA----VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK 168
Query: 125 ENDFVSISATRGTIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLEMTGGR---RNSNLKA 180
++F G+ Y APEL + + + DV+ G++L + G NLK
Sbjct: 169 LDEFC------GSPPYAAPELFQGKKYD--GPEVDVWSLGVILYTLVSGSLPFDGQNLKE 220
Query: 181 TRS 183
R
Sbjct: 221 LRE 223
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 82/187 (43%), Gaps = 18/187 (9%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
E+ + H ++++L S + +V E++ G L +I K R + +L +
Sbjct: 60 REIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYIC-KHGRVEEMEARRLFQ 118
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISA 133
++Y H ++H D+KP N+LLD + ++DFGL+ + +F+ S
Sbjct: 119 ---QILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRDSC 171
Query: 134 TRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSN-------LKATRSSKA 186
G+ Y APE+IS + D++ G++L + G + K R
Sbjct: 172 --GSPNYAAPEVISGRL-YAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVF 228
Query: 187 YFPSWVS 193
Y P +++
Sbjct: 229 YIPEYLN 235
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 33/229 (14%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG 63
S + +E ++E + + + +V +LLG C + + L+ + MP G L ++ +E +
Sbjct: 57 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYV--REHKD 113
Query: 64 QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHP 123
S + L A G+ YL D ++H D+ N+L+ ++DFGLAK
Sbjct: 114 NIGS-QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 169
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKATRS 183
E + I ++A E I T +SDV+ +G+ + E+ T
Sbjct: 170 AEEKEYHAEGGKVPIKWMALESILHRIYT--HQSDVWSYGVTVWELM----------TFG 217
Query: 184 SKAY--FP-SWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVK 229
SK Y P S +S L KG E + +C I ++ I VK
Sbjct: 218 SKPYDGIPASEISSILEKG-----------ERLPQPPICTIDVYMIMVK 255
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 13 INEVSTIGRIH---HVNVVQLLGFCS-----EGSKRALVYEFMPNGSLDRHIFPKESRGQ 64
I EV+ + + H NVV+L C+ +K LV+E + D + +
Sbjct: 59 IREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ---DLTTYLDKVPEP 115
Query: 65 SCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPK 124
E + ++ G+++LH+ ++H D+KP NIL+ + ++DFGLA+ +
Sbjct: 116 GVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSF 172
Query: 125 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ S+ T+ Y APE++ ++ + + D++ G + EM
Sbjct: 173 QMALTSVVV---TLWYRAPEVLLQS--SYATPVDLWSVGCIFAEM 212
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 41/204 (20%)
Query: 3 ENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRA------LVYEFMPNGSLDRHI 56
E S + E + E+ + +++H NVV K A L E+ G L +++
Sbjct: 50 ELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL 109
Query: 57 FPKESRGQSCSWEK---LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLD---HNFV 110
++ ++C K + + S + + YLH I+H D+KP NI+L +
Sbjct: 110 ----NQFENCCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLI 162
Query: 111 PNVSDFGLAKFHPKE---NDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLL 167
+ D G AK + +FV GT+ Y+APEL+ + TV+ D + FG +
Sbjct: 163 HKIIDLGYAKELDQGELCTEFV------GTLQYLAPELLEQKKYTVTV--DYWSFGTLAF 214
Query: 168 EMTGGRRNSNLKATRSSKAYFPSW 191
E G R + P+W
Sbjct: 215 ECITGFR-----------PFLPNW 227
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 61/126 (48%), Gaps = 7/126 (5%)
Query: 47 MPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLD 106
+ + SLD+ +GQ+ + L ++A +E+LH+ + ++H D+KP N+L++
Sbjct: 114 LXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLIN 171
Query: 107 HNFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT--VSCKSDVYGFGM 164
DFG++ + D V+ G Y APE I+ S KSD++ G+
Sbjct: 172 ALGQVKXCDFGISGYL---VDDVAKDIDAGCKPYXAPERINPELNQKGYSVKSDIWSLGI 228
Query: 165 VLLEMT 170
+E+
Sbjct: 229 TXIELA 234
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 41/204 (20%)
Query: 3 ENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRA------LVYEFMPNGSLDRHI 56
E S + E + E+ + +++H NVV K A L E+ G L +++
Sbjct: 51 ELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL 110
Query: 57 FPKESRGQSCSWEK---LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLD---HNFV 110
++ ++C K + + S + + YLH I+H D+KP NI+L +
Sbjct: 111 ----NQFENCCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLI 163
Query: 111 PNVSDFGLAKFHPKE---NDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLL 167
+ D G AK + +FV GT+ Y+APEL+ + TV+ D + FG +
Sbjct: 164 HKIIDLGYAKELDQGELCTEFV------GTLQYLAPELLEQKKYTVTV--DYWSFGTLAF 215
Query: 168 EMTGGRRNSNLKATRSSKAYFPSW 191
E G R + P+W
Sbjct: 216 ECITGFR-----------PFLPNW 228
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 17/138 (12%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
E+ + R+ H N+++L ++ +LV E + G L I K + + + + +
Sbjct: 97 TEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQ 156
Query: 74 VASGTAHGIEYLH-NGCDVCILHLDIKPHNILLDHNFVPN----VSDFGLAKFHPKENDF 128
+ A YLH NG I+H D+KP N LL P+ ++DFGL+K +
Sbjct: 157 ILEAVA----YLHENG----IVHRDLKPEN-LLYATPAPDAPLKIADFGLSKIVEHQ--- 204
Query: 129 VSISATRGTIGYIAPELI 146
V + GT GY APE++
Sbjct: 205 VLMKTVCGTPGYCAPEIL 222
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 33/229 (14%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG 63
S + +E ++E + + + +V +LLG C + + L+ + MP G L ++ +E +
Sbjct: 59 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV--REHKD 115
Query: 64 QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHP 123
S + L A G+ YL D ++H D+ N+L+ ++DFGLAK
Sbjct: 116 NIGS-QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 171
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKATRS 183
E + I ++A E I T +SDV+ +G+ + E+ T
Sbjct: 172 AEEKEYHAEGGKVPIKWMALESILHRIYT--HQSDVWSYGVTVWELM----------TFG 219
Query: 184 SKAY--FP-SWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVK 229
SK Y P S +S L KG E + +C I ++ I VK
Sbjct: 220 SKPYDGIPASEISSILEKG-----------ERLPQPPICTIDVYMIMVK 257
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 77/183 (42%), Gaps = 22/183 (12%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
S ++ EV + ++H N+V+L LV E+ G + ++ + +
Sbjct: 56 SLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA 115
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKEND 127
K ++ S ++Y H I+H D+K N+LLD + ++DFG + N+
Sbjct: 116 RAKFRQIVSA----VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS------NE 162
Query: 128 FV---SISATRGTIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLEMTGGR---RNSNLKA 180
F + G+ Y APEL + + + DV+ G++L + G NLK
Sbjct: 163 FTFGNKLDTFCGSPPYAAPELFQGKKYD--GPEVDVWSLGVILYTLVSGSLPFDGQNLKE 220
Query: 181 TRS 183
R
Sbjct: 221 LRE 223
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 77/183 (42%), Gaps = 22/183 (12%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
S ++ EV + ++H N+V+L LV E+ G + ++ + +
Sbjct: 56 SLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA 115
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKEND 127
K ++ S ++Y H I+H D+K N+LLD + ++DFG + N+
Sbjct: 116 RAKFRQIVSA----VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS------NE 162
Query: 128 FV---SISATRGTIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLEMTGGR---RNSNLKA 180
F + G+ Y APEL + + + DV+ G++L + G NLK
Sbjct: 163 FTFGNKLDTFCGSPPYAAPELFQGKKYD--GPEVDVWSLGVILYTLVSGSLPFDGQNLKE 220
Query: 181 TRS 183
R
Sbjct: 221 LRE 223
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 33/229 (14%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG 63
S + +E ++E + + + +V +LLG C + + L+ + MP G L ++ +E +
Sbjct: 60 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV--REHKD 116
Query: 64 QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHP 123
S + L A G+ YL D ++H D+ N+L+ ++DFGLAK
Sbjct: 117 NIGS-QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 172
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKATRS 183
E + I ++A E I T +SDV+ +G+ + E+ T
Sbjct: 173 AEEKEYHAEGGKVPIKWMALESILHRIYT--HQSDVWSYGVTVWELM----------TFG 220
Query: 184 SKAY--FP-SWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVK 229
SK Y P S +S L KG E + +C I ++ I VK
Sbjct: 221 SKPYDGIPASEISSILEKG-----------ERLPQPPICTIDVYMIMVK 258
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 77/183 (42%), Gaps = 22/183 (12%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
S ++ EV + ++H N+V+L LV E+ G + ++ + +
Sbjct: 56 SLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA 115
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKEND 127
K ++ S ++Y H I+H D+K N+LLD + ++DFG + N+
Sbjct: 116 RAKFRQIVSA----VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS------NE 162
Query: 128 FV---SISATRGTIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLEMTGGR---RNSNLKA 180
F + G+ Y APEL + + + DV+ G++L + G NLK
Sbjct: 163 FTFGNKLDTFCGSPPYAAPELFQGKKYD--GPEVDVWSLGVILYTLVSGSLPFDGQNLKE 220
Query: 181 TRS 183
R
Sbjct: 221 LRE 223
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 89/227 (39%), Gaps = 47/227 (20%)
Query: 2 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKES 61
L N + + E+ + EV + ++ H +V+ E + + P L +
Sbjct: 40 LPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQM----- 94
Query: 62 RGQSCSWEKLHEVASG------------------TAHGIEYLHNGCDVCILHLDIKPHNI 103
Q C E L + +G A +E+LH+ ++H D+KP NI
Sbjct: 95 --QLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNI 149
Query: 104 LLDHNFVPNVSDFGLAKFHPKENDFVSI----------SATRGTIGYIAPELISRNFGTV 153
+ V V DFGL ++ + ++ + GT Y++PE I N +
Sbjct: 150 FFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGN--SY 207
Query: 154 SCKSDVYGFGMVLLEM-----TGGRRNSNLKATRSSKAYFPSWVSDQ 195
S K D++ G++L E+ T R L R+ K FP + +
Sbjct: 208 SHKVDIFSLGLILFELLYPFSTQMERVRTLTDVRNLK--FPPLFTQK 252
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 33/229 (14%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG 63
S + +E ++E + + + +V +LLG C + + L+ + MP G L ++ +E +
Sbjct: 63 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV--REHKD 119
Query: 64 QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHP 123
S + L A G+ YL D ++H D+ N+L+ ++DFGLAK
Sbjct: 120 NIGS-QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 175
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKATRS 183
E + I ++A E I T +SDV+ +G+ + E+ T
Sbjct: 176 AEEKEYHAEGGKVPIKWMALESILHRIYT--HQSDVWSYGVTVWELM----------TFG 223
Query: 184 SKAY--FP-SWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVK 229
SK Y P S +S L KG E + +C I ++ I VK
Sbjct: 224 SKPYDGIPASEISSILEKG-----------ERLPQPPICTIDVYMIMVK 261
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 9/161 (5%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
I E+S + ++H N+V+LL +K LV+EF+ D F S +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIK 106
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSIS 132
G+ + H+ +LH D+KP N+L++ ++DFGLA+ + +
Sbjct: 107 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYT 161
Query: 133 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
T+ Y APE++ S D++ G + EM R
Sbjct: 162 HEVVTLWYRAPEIL-LGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 33/229 (14%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG 63
S + +E ++E + + + +V +LLG C + + L+ + MP G L ++ +E +
Sbjct: 56 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV--REHKD 112
Query: 64 QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHP 123
S + L A G+ YL D ++H D+ N+L+ ++DFGLAK
Sbjct: 113 NIGS-QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKATRS 183
E + I ++A E I T +SDV+ +G+ + E+ T
Sbjct: 169 AEEKEYHAEGGKVPIKWMALESILHRIYT--HQSDVWSYGVTVWELM----------TFG 216
Query: 184 SKAY--FP-SWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVK 229
SK Y P S +S L KG E + +C I ++ I VK
Sbjct: 217 SKPYDGIPASEISSILEKG-----------ERLPQPPICTIDVYMIMVK 254
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 16/164 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E+ P G + H+ R S
Sbjct: 87 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFSEP 142
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+++D V+DFG AK +
Sbjct: 143 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL 199
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT Y+APE+I S+ + D + G+++ EM G
Sbjct: 200 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 235
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 33/229 (14%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG 63
S + +E ++E + + + +V +LLG C + + L+ + MP G L ++ +E +
Sbjct: 56 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYV--REHKD 112
Query: 64 QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHP 123
S + L A G+ YL D ++H D+ N+L+ ++DFGLAK
Sbjct: 113 NIGS-QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKATRS 183
E + I ++A E I T +SDV+ +G+ + E+ T
Sbjct: 169 AEEKEYHAEGGKVPIKWMALESILHRIYT--HQSDVWSYGVTVWELM----------TFG 216
Query: 184 SKAY--FP-SWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVK 229
SK Y P S +S L KG E + +C I ++ I VK
Sbjct: 217 SKPYDGIPASEISSILEKG-----------ERLPQPPICTIDVYMIMVK 254
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 33/229 (14%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG 63
S + +E ++E + + + +V +LLG C + + L+ + MP G L ++ +E +
Sbjct: 63 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV--REHKD 119
Query: 64 QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHP 123
S + L A G+ YL D ++H D+ N+L+ ++DFGLAK
Sbjct: 120 NIGS-QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 175
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKATRS 183
E + I ++A E I T +SDV+ +G+ + E+ T
Sbjct: 176 AEEKEYHAEGGKVPIKWMALESILHRIYT--HQSDVWSYGVTVWELM----------TFG 223
Query: 184 SKAY--FP-SWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVK 229
SK Y P S +S L KG E + +C I ++ I VK
Sbjct: 224 SKPYDGIPASEISSILEKG-----------ERLPQPPICTIDVYMIMVK 261
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 9/161 (5%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
I E+S + ++H N+V+LL +K LV+EF+ D F S +
Sbjct: 57 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIK 113
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSIS 132
G+ + H+ +LH D+KP N+L++ ++DFGLA+ + +
Sbjct: 114 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYT 168
Query: 133 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
T+ Y APE++ S D++ G + EM R
Sbjct: 169 HEVVTLWYRAPEIL-LGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 33/229 (14%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG 63
S + +E ++E + + + +V +LLG C + + L+ + MP G L ++ +E +
Sbjct: 57 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV--REHKD 113
Query: 64 QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHP 123
S + L A G+ YL D ++H D+ N+L+ ++DFGLAK
Sbjct: 114 NIGS-QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 169
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKATRS 183
E + I ++A E I T +SDV+ +G+ + E+ T
Sbjct: 170 AEEKEYHAEGGKVPIKWMALESILHRIYT--HQSDVWSYGVTVWELM----------TFG 217
Query: 184 SKAY--FP-SWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVK 229
SK Y P S +S L KG E + +C I ++ I VK
Sbjct: 218 SKPYDGIPASEISSILEKG-----------ERLPQPPICTIDVYMIMVK 255
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 33/229 (14%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG 63
S + +E ++E + + + +V +LLG C + + L+ + MP G L ++ +E +
Sbjct: 58 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV--REHKD 114
Query: 64 QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHP 123
S + L A G+ YL D ++H D+ N+L+ ++DFGLAK
Sbjct: 115 NIGS-QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 170
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKATRS 183
E + I ++A E I T +SDV+ +G+ + E+ T
Sbjct: 171 AEEKEYHAEGGKVPIKWMALESILHRIYT--HQSDVWSYGVTVWELM----------TFG 218
Query: 184 SKAY--FP-SWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVK 229
SK Y P S +S L KG E + +C I ++ I VK
Sbjct: 219 SKPYDGIPASEISSILEKG-----------ERLPQPPICTIDVYMIMVK 256
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 16/164 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E+ P G + H+ R S
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFSEP 141
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+++D V+DFG AK +
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT Y+APE+I S+ + D + G+++ EM G
Sbjct: 199 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 33/229 (14%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG 63
S + +E ++E + + + +V +LLG C + + L+ + MP G L ++ +E +
Sbjct: 53 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV--REHKD 109
Query: 64 QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHP 123
S + L A G+ YL D ++H D+ N+L+ ++DFGLAK
Sbjct: 110 NIGS-QYLLNWCVQIAEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 165
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKATRS 183
E + I ++A E I T +SDV+ +G+ + E+ T
Sbjct: 166 AEEKEYHAEGGKVPIKWMALESILHRIYT--HQSDVWSYGVTVWELM----------TFG 213
Query: 184 SKAY--FP-SWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVK 229
SK Y P S +S L KG E + +C I ++ I VK
Sbjct: 214 SKPYDGIPASEISSILEKG-----------ERLPQPPICTIDVYMIMVK 251
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 16/164 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E+ P G + H+ R S
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFSEP 141
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+++D V+DFG AK +
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL 198
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT Y+APE+I S+ + D + G+++ EM G
Sbjct: 199 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 33/229 (14%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG 63
S + +E ++E + + + +V +LLG C + + L+ + MP G L ++ +E +
Sbjct: 63 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV--REHKD 119
Query: 64 QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHP 123
S + L A G+ YL D ++H D+ N+L+ ++DFGLAK
Sbjct: 120 NIGS-QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 175
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKATRS 183
E + I ++A E I T +SDV+ +G+ + E+ T
Sbjct: 176 AEEKEYHAEGGKVPIKWMALESILHRIYT--HQSDVWSYGVTVWELM----------TFG 223
Query: 184 SKAY--FP-SWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVK 229
SK Y P S +S L KG E + +C I ++ I VK
Sbjct: 224 SKPYDGIPASEISSILEKG-----------ERLPQPPICTIDVYMIMVK 261
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 69/159 (43%), Gaps = 13/159 (8%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
E+ + H N++++ + + + L+ EF P G L + + + S + E
Sbjct: 63 REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE 122
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISA 133
+A LH + ++H DIKP N+L+ + ++DFG + P +
Sbjct: 123 LADA-------LHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRX 171
Query: 134 TRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT+ Y+ PE+I T K D++ G++ E G
Sbjct: 172 MCGTLDYLPPEMIEGK--THDEKVDLWCAGVLCYEFLVG 208
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 69/159 (43%), Gaps = 13/159 (8%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
E+ + H N++++ + + + L+ EF P G L + + + S + E
Sbjct: 63 REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE 122
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISA 133
+A LH + ++H DIKP N+L+ + ++DFG + P +
Sbjct: 123 LADA-------LHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRX 171
Query: 134 TRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT+ Y+ PE+I T K D++ G++ E G
Sbjct: 172 MCGTLDYLPPEMIEGK--THDEKVDLWCAGVLCYEFLVG 208
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 69/159 (43%), Gaps = 13/159 (8%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
E+ + H N++++ + + + L+ EF P G L + + + S + E
Sbjct: 64 REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE 123
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISA 133
+A LH + ++H DIKP N+L+ + ++DFG + P +
Sbjct: 124 LADA-------LHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRX 172
Query: 134 TRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT+ Y+ PE+I T K D++ G++ E G
Sbjct: 173 MCGTLDYLPPEMIEGK--THDEKVDLWCAGVLCYEFLVG 209
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 33/229 (14%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG 63
S + +E ++E + + + +V +LLG C + + L+ + MP G L ++ +E +
Sbjct: 62 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV--REHKD 118
Query: 64 QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHP 123
S + L A G+ YL D ++H D+ N+L+ ++DFGLAK
Sbjct: 119 NIGS-QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 174
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKATRS 183
E + I ++A E I T +SDV+ +G+ + E+ T
Sbjct: 175 AEEKEYHAEGGKVPIKWMALESILHRIYT--HQSDVWSYGVTVWELM----------TFG 222
Query: 184 SKAY--FP-SWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVK 229
SK Y P S +S L KG E + +C I ++ I VK
Sbjct: 223 SKPYDGIPASEISSILEKG-----------ERLPQPPICTIDVYMIMVK 260
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 77/183 (42%), Gaps = 22/183 (12%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
S ++ EV + ++H N+V+L LV E+ G + ++ + +
Sbjct: 57 SLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA 116
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKEND 127
K ++ S ++Y H I+H D+K N+LLD + ++DFG + N+
Sbjct: 117 RAKFRQIVSA----VQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFS------NE 163
Query: 128 FV---SISATRGTIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLEMTGGR---RNSNLKA 180
F + G+ Y APEL + + + DV+ G++L + G NLK
Sbjct: 164 FTVGNKLDTFCGSPPYAAPELFQGKKYD--GPEVDVWSLGVILYTLVSGSLPFDGQNLKE 221
Query: 181 TRS 183
R
Sbjct: 222 LRE 224
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 27/210 (12%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E++P G + H+ R
Sbjct: 79 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFXEP 134
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK +
Sbjct: 135 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 191
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG-------RRNSNLKAT 181
GT Y+APE+I S+ + D + G+++ EM G + +
Sbjct: 192 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 243
Query: 182 RSSKAYFPSWVSDQLNKGGNLELRNVTEIE 211
S K FPS S L LRN+ +++
Sbjct: 244 VSGKVRFPSHFSSDLKD----LLRNLLQVD 269
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 33/229 (14%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG 63
S + +E ++E + + + +V +LLG C + + L+ + MP G L ++ +E +
Sbjct: 90 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV--REHKD 146
Query: 64 QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHP 123
S + L A G+ YL D ++H D+ N+L+ ++DFGLAK
Sbjct: 147 NIGS-QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 202
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKATRS 183
E + I ++A E I T +SDV+ +G+ + E+ T
Sbjct: 203 AEEKEYHAEGGKVPIKWMALESILHRIYT--HQSDVWSYGVTVWELM----------TFG 250
Query: 184 SKAY--FP-SWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVK 229
SK Y P S +S L KG E + +C I ++ I VK
Sbjct: 251 SKPYDGIPASEISSILEKG-----------ERLPQPPICTIDVYMIMVK 288
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 33/229 (14%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG 63
S + +E ++E + + + +V +LLG C + + L+ + MP G L ++ +E +
Sbjct: 59 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV--REHKD 115
Query: 64 QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHP 123
S + L A G+ YL D ++H D+ N+L+ ++DFGLAK
Sbjct: 116 NIGS-QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 171
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKATRS 183
E + I ++A E I T +SDV+ +G+ + E+ T
Sbjct: 172 AEEKEYHAEGGKVPIKWMALESILHRIYT--HQSDVWSYGVTVWELM----------TFG 219
Query: 184 SKAY--FP-SWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVK 229
SK Y P S +S L KG E + +C I ++ I VK
Sbjct: 220 SKPYDGIPASEISSILEKG-----------ERLPQPPICTIDVYMIMVK 257
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 33/229 (14%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG 63
S + +E ++E + + + +V +LLG C + + L+ + MP G L ++ +E +
Sbjct: 59 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV--REHKD 115
Query: 64 QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHP 123
S + L A G+ YL D ++H D+ N+L+ ++DFGLAK
Sbjct: 116 NIGS-QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 171
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKATRS 183
E + I ++A E I T +SDV+ +G+ + E+ T
Sbjct: 172 AEEKEYHAEGGKVPIKWMALESILHRIYT--HQSDVWSYGVTVWELM----------TFG 219
Query: 184 SKAY--FP-SWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVK 229
SK Y P S +S L KG E + +C I ++ I VK
Sbjct: 220 SKPYDGIPASEISSILEKG-----------ERLPQPPICTIDVYMIMVK 257
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 20/182 (10%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
S ++ EV ++H N+V+L LV E+ G + ++ + +
Sbjct: 56 SLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEA 115
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKEND 127
K ++ S ++Y H I+H D+K N+LLD + ++DFG + N+
Sbjct: 116 RAKFRQIVSA----VQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFS------NE 162
Query: 128 FV---SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR---RNSNLKAT 181
F + A G Y APEL + DV+ G++L + G NLK
Sbjct: 163 FTFGNKLDAFCGAPPYAAPELFQGK-KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 221
Query: 182 RS 183
R
Sbjct: 222 RE 223
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 9/161 (5%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
I E+S + ++H N+V+LL +K LV+EF+ D F S +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIK 106
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSIS 132
G+ + H+ +LH D+KP N+L++ ++DFGLA+ + +
Sbjct: 107 SYLFQLLQGLSFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYT 161
Query: 133 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
T+ Y APE++ S D++ G + EM R
Sbjct: 162 HEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 74/163 (45%), Gaps = 14/163 (8%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
I EVS + + H N+V L LV+E++ + L +++ + G + +
Sbjct: 48 IREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYL---DDCGNIINMHNVK 103
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSIS 132
G+ Y H +LH D+KP N+L++ ++DFGLA+ K +
Sbjct: 104 LFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLAR--AKSIPTKTYD 158
Query: 133 ATRGTIGYIAPELI--SRNFGTVSCKSDVYGFGMVLLEMTGGR 173
T+ Y P+++ S ++ T + D++G G + EM GR
Sbjct: 159 NEVVTLWYRPPDILLGSTDYST---QIDMWGVGCIFYEMATGR 198
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 96/223 (43%), Gaps = 33/223 (14%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
+E ++E + + + +V +LLG C + + L+ + MP G L ++ +E + S +
Sbjct: 56 KEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV--REHKDNIGS-Q 111
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
L A G+ YL D ++H D+ N+L+ ++DFGLAK E
Sbjct: 112 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 168
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKATRSSKAY-- 187
+ I ++A E I T +SDV+ +G+ + E+ T SK Y
Sbjct: 169 HAEGGKVPIKWMALESILHRIYT--HQSDVWSYGVTVWELM----------TFGSKPYDG 216
Query: 188 FP-SWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVK 229
P S +S L KG E + +C I ++ I VK
Sbjct: 217 IPASEISSILEKG-----------ERLPQPPICTIDVYMIMVK 248
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 33/229 (14%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG 63
S + +E ++E + + + +V +LLG C + + L+ + MP G L ++ +E +
Sbjct: 56 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV--REHKD 112
Query: 64 QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHP 123
S + L A G+ YL D ++H D+ N+L+ ++DFGLAK
Sbjct: 113 NIGS-QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKATRS 183
E + I ++A E I T +SDV+ +G+ + E+ T
Sbjct: 169 AEEKEYHAEGGKVPIKWMALESILHRIYT--HQSDVWSYGVTVWELM----------TFG 216
Query: 184 SKAY--FP-SWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVK 229
SK Y P S +S L KG E + +C I ++ I VK
Sbjct: 217 SKPYDGIPASEISSILEKG-----------ERLPQPPICTIDVYMIMVK 254
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 27/210 (12%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E++P G + H+ R
Sbjct: 87 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFXEP 142
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK +
Sbjct: 143 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 199
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG-------RRNSNLKAT 181
GT Y+APE+I S+ + D + G+++ EM G + +
Sbjct: 200 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
Query: 182 RSSKAYFPSWVSDQLNKGGNLELRNVTEIE 211
S K FPS S L LRN+ +++
Sbjct: 252 VSGKVRFPSHFSSDLKD----LLRNLLQVD 277
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 13/163 (7%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
I E+S + ++H N+V+LL +K LV+EF+ D F S +
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKTFMDASALTGIPLPLIK 109
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFH--PKENDFVS 130
G+ + H+ +LH D+KP N+L++ ++DFGLA+ P
Sbjct: 110 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 166
Query: 131 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T+ Y APE++ S D++ G + EM R
Sbjct: 167 VV----TLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 9/161 (5%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
I E+S + ++H N+V+LL +K LV+EF+ D F S +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIK 106
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSIS 132
G+ + H+ +LH D+KP N+L++ ++DFGLA+ + +
Sbjct: 107 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYT 161
Query: 133 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
T+ Y APE++ S D++ G + EM R
Sbjct: 162 HEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 9/161 (5%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
I E+S + ++H N+V+LL +K LV+EF+ D F S +
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIK 105
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSIS 132
G+ + H+ +LH D+KP N+L++ ++DFGLA+ + +
Sbjct: 106 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYT 160
Query: 133 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
T+ Y APE++ S D++ G + EM R
Sbjct: 161 HEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 27/210 (12%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E++P G + H+ R
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFXEP 141
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK +
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG-------RRNSNLKAT 181
GT Y+APE+I S+ + D + G+++ EM G + +
Sbjct: 199 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 182 RSSKAYFPSWVSDQLNKGGNLELRNVTEIE 211
S K FPS S L LRN+ +++
Sbjct: 251 VSGKVRFPSHFSSDLKD----LLRNLLQVD 276
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 27/210 (12%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E++P G + H+ R
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFXEP 141
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK +
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG-------RRNSNLKAT 181
GT Y+APE+I S+ + D + G+++ EM G + +
Sbjct: 199 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 182 RSSKAYFPSWVSDQLNKGGNLELRNVTEIE 211
S K FPS S L LRN+ +++
Sbjct: 251 VSGKVRFPSHFSSDLKD----LLRNLLQVD 276
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 33/229 (14%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG 63
S + +E ++E + + + +V +LLG C + + L+ + MP G L ++ +E +
Sbjct: 56 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV--REHKD 112
Query: 64 QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHP 123
S + L A G+ YL D ++H D+ N+L+ ++DFGLAK
Sbjct: 113 NIGS-QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKATRS 183
E + I ++A E I T +SDV+ +G+ + E+ T
Sbjct: 169 AEEKEYHAEGGKVPIKWMALESILHRIYT--HQSDVWSYGVTVWELM----------TFG 216
Query: 184 SKAY--FP-SWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVK 229
SK Y P S +S L KG E + +C I ++ I VK
Sbjct: 217 SKPYDGIPASEISSILEKG-----------ERLPQPPICTIDVYMIMVK 254
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 33/229 (14%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG 63
S + +E ++E + + + +V +LLG C + + L+ + MP G L ++ +E +
Sbjct: 81 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV--REHKD 137
Query: 64 QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHP 123
S + L A G+ YL D ++H D+ N+L+ ++DFGLAK
Sbjct: 138 NIGS-QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 193
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKATRS 183
E + I ++A E I T +SDV+ +G+ + E+ T
Sbjct: 194 AEEKEYHAEGGKVPIKWMALESILHRIYT--HQSDVWSYGVTVWELM----------TFG 241
Query: 184 SKAY--FP-SWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVK 229
SK Y P S +S L KG E + +C I ++ I VK
Sbjct: 242 SKPYDGIPASEISSILEKG-----------ERLPQPPICTIDVYMIMVK 279
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 9/161 (5%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
I E+S + ++H N+V+LL +K LV+EF+ D F S +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIK 106
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSIS 132
G+ + H+ +LH D+KP N+L++ ++DFGLA+ + +
Sbjct: 107 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYT 161
Query: 133 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
T+ Y APE++ S D++ G + EM R
Sbjct: 162 HEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 9/161 (5%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
I E+S + ++H N+V+LL +K LV+EF+ D F S +
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIK 105
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSIS 132
G+ + H+ +LH D+KP N+L++ ++DFGLA+ + +
Sbjct: 106 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYT 160
Query: 133 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
T+ Y APE++ S D++ G + EM R
Sbjct: 161 HEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 33/229 (14%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG 63
S + +E ++E + + + +V +LLG C + + L+ + MP G L ++ +E +
Sbjct: 58 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV--REHKD 114
Query: 64 QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHP 123
S + L A G+ YL D ++H D+ N+L+ ++DFGLAK
Sbjct: 115 NIGS-QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 170
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKATRS 183
E + I ++A E I T +SDV+ +G+ + E+ T
Sbjct: 171 AEEKEYHAEGGKVPIKWMALESILHRIYT--HQSDVWSYGVTVWELM----------TFG 218
Query: 184 SKAY--FP-SWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVK 229
SK Y P S +S L KG E + +C I ++ I VK
Sbjct: 219 SKPYDGIPASEISSILEKG-----------ERLPQPPICTIDVYMIMVK 256
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 9/161 (5%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
I E+S + ++H N+V+LL +K LV+EF+ D F S +
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIK 105
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSIS 132
G+ + H+ +LH D+KP N+L++ ++DFGLA+ + +
Sbjct: 106 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYT 160
Query: 133 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
T+ Y APE++ S D++ G + EM R
Sbjct: 161 HEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 77/183 (42%), Gaps = 22/183 (12%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
S ++ EV + ++H N+V+L LV E+ G + ++ + +
Sbjct: 49 SLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEA 108
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKEND 127
K ++ S ++Y H I+H D+K N+LLD + ++DFG + N+
Sbjct: 109 RAKFRQIVSA----VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS------NE 155
Query: 128 FV---SISATRGTIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLEMTGGR---RNSNLKA 180
F + G+ Y APEL + + + DV+ G++L + G NLK
Sbjct: 156 FTFGNKLDTFCGSPPYAAPELFQGKKYD--GPEVDVWSLGVILYTLVSGSLPFDGQNLKE 213
Query: 181 TRS 183
R
Sbjct: 214 LRE 216
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 9/161 (5%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
I E+S + ++H N+V+LL +K LV+EF+ D F S +
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIK 107
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSIS 132
G+ + H+ +LH D+KP N+L++ ++DFGLA+ + +
Sbjct: 108 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYT 162
Query: 133 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
T+ Y APE++ S D++ G + EM R
Sbjct: 163 HEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 16/164 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E++ G + H+ R S
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEP 141
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK +
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG 172
+ GT Y+APE+I S+ + D + G+++ EM G
Sbjct: 199 A-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 9/161 (5%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
I E+S + ++H N+V+LL +K LV+EF+ D F S +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIK 106
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSIS 132
G+ + H+ +LH D+KP N+L++ ++DFGLA+ + +
Sbjct: 107 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYT 161
Query: 133 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
T+ Y APE++ S D++ G + EM R
Sbjct: 162 HEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 9/161 (5%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
I E+S + ++H N+V+LL +K LV+EF+ D F S +
Sbjct: 54 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIK 110
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSIS 132
G+ + H+ +LH D+KP N+L++ ++DFGLA+ + +
Sbjct: 111 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYT 165
Query: 133 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
T+ Y APE++ S D++ G + EM R
Sbjct: 166 HEVVTLWYRAPEILL-GCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 17/176 (9%)
Query: 1 MLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKE 60
+++ SK E I + G+ H N++ L +G +V E G L I
Sbjct: 54 IIDKSKRDPTEEIEILLRYGQ--HPNIITLKDVYDDGKYVYVVTELXKGGELLDKIL--- 108
Query: 61 SRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNIL-LDHNFVPN---VSDF 116
R + S + V +EYLH ++H D+KP NIL +D + P + DF
Sbjct: 109 -RQKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDF 164
Query: 117 GLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
G AK EN + T ++APE++ R +C D++ G++L G
Sbjct: 165 GFAKQLRAENGLLXTPCY--TANFVAPEVLERQGYDAAC--DIWSLGVLLYTXLTG 216
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 13/163 (7%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
I E+S + ++H N+V+LL +K LV+EF+ D F S +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIK 106
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFH--PKENDFVS 130
G+ + H+ +LH D+KP N+L++ ++DFGLA+ P
Sbjct: 107 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 163
Query: 131 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T+ Y APE++ S D++ G + EM R
Sbjct: 164 VV----TLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 13/163 (7%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
I E+S + ++H N+V+LL +K LV+EF+ D F S +
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIK 105
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFH--PKENDFVS 130
G+ + H+ +LH D+KP N+L++ ++DFGLA+ P
Sbjct: 106 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 162
Query: 131 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T+ Y APE++ S D++ G + EM R
Sbjct: 163 VV----TLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 9/161 (5%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
I E+S + ++H N+V+LL +K LV+EF+ D F S +
Sbjct: 57 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIK 113
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSIS 132
G+ + H+ +LH D+KP N+L++ ++DFGLA+ + +
Sbjct: 114 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYT 168
Query: 133 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
T+ Y APE++ S D++ G + EM R
Sbjct: 169 HEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 13/163 (7%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
I E+S + ++H N+V+LL +K LV+EF+ D F S +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIK 106
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFH--PKENDFVS 130
G+ + H+ +LH D+KP N+L++ ++DFGLA+ P
Sbjct: 107 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 163
Query: 131 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T+ Y APE++ S D++ G + EM R
Sbjct: 164 VV----TLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 13/163 (7%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
I E+S + ++H N+V+LL +K LV+EF+ D F S +
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIK 105
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFH--PKENDFVS 130
G+ + H+ +LH D+KP N+L++ ++DFGLA+ P
Sbjct: 106 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 162
Query: 131 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T+ Y APE++ S D++ G + EM R
Sbjct: 163 VV----TLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 13/163 (7%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
I E+S + ++H N+V+LL +K LV+EF+ D F S +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIK 106
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFH--PKENDFVS 130
G+ + H+ +LH D+KP N+L++ ++DFGLA+ P
Sbjct: 107 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 163
Query: 131 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T+ Y APE++ S D++ G + EM R
Sbjct: 164 VV----TLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 25/163 (15%)
Query: 32 GFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAH---GIEYLHNG 88
F +E +K L+ +++ G L H+ +E + HEV +E+LH
Sbjct: 127 AFQTE-TKLHLILDYINGGELFTHLSQRERFTE-------HEVQIYVGEIVLALEHLHK- 177
Query: 89 CDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATR-----GTIGYIAP 143
+ I++ DIK NILLD N ++DFGL+K +FV+ R GTI Y+AP
Sbjct: 178 --LGIIYRDIKLENILLDSNGHVVLTDFGLSK------EFVADETERAYDFCGTIEYMAP 229
Query: 144 ELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKATRSSKA 186
+++ D + G+++ E+ G + ++S+A
Sbjct: 230 DIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQA 272
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 13/163 (7%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
I E+S + ++H N+V+LL +K LV+EF+ D F S +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIK 106
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFH--PKENDFVS 130
G+ + H+ +LH D+KP N+L++ ++DFGLA+ P
Sbjct: 107 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 163
Query: 131 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T+ Y APE++ S D++ G + EM R
Sbjct: 164 VV----TLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 73/162 (45%), Gaps = 6/162 (3%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
+ E+ + R H N++ + + + ++ ++ ++ K + Q S + +
Sbjct: 69 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHIC 127
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS-I 131
G++Y+H+ +LH D+KP N+LL+ + DFGLA+ ++D +
Sbjct: 128 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFL 184
Query: 132 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T Y APE++ + G D++ G +L EM R
Sbjct: 185 TEYVATRWYRAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNR 225
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 13/163 (7%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
I E+S + ++H N+V+LL +K LV+EF+ D F S +
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIK 107
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFH--PKENDFVS 130
G+ + H+ +LH D+KP N+L++ ++DFGLA+ P
Sbjct: 108 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 164
Query: 131 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T+ Y APE++ S D++ G + EM R
Sbjct: 165 VV----TLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 77/183 (42%), Gaps = 22/183 (12%)
Query: 8 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
S ++ EV + ++H N+V+L L+ E+ G + ++ + +
Sbjct: 54 SLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEA 113
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKEND 127
K ++ S ++Y H I+H D+K N+LLD + ++DFG + N+
Sbjct: 114 RSKFRQIVSA----VQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFS------NE 160
Query: 128 FV---SISATRGTIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLEMTGGR---RNSNLKA 180
F + G+ Y APEL + + + DV+ G++L + G NLK
Sbjct: 161 FTVGGKLDTFCGSPPYAAPELFQGKKYD--GPEVDVWSLGVILYTLVSGSLPFDGQNLKE 218
Query: 181 TRS 183
R
Sbjct: 219 LRE 221
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 13/163 (7%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
I E+S + ++H N+V+LL +K LV+EF+ D F S +
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIK 108
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFH--PKENDFVS 130
G+ + H+ +LH D+KP N+L++ ++DFGLA+ P
Sbjct: 109 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 165
Query: 131 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T+ Y APE++ S D++ G + EM R
Sbjct: 166 VV----TLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 14/166 (8%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI----FPKESRGQSCSW 68
+ E+ + R H N++ + RA E M + L H+ K + Q S
Sbjct: 89 LREIKILLRFRHENIIGINDII-----RAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSN 143
Query: 69 EKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDF 128
+ + G++Y+H+ +LH D+KP N+LL+ + DFGLA+ ++D
Sbjct: 144 DHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 200
Query: 129 VS-ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
++ T Y APE++ + G D++ G +L EM R
Sbjct: 201 TGFLTEYVATRWYRAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNR 245
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 13/163 (7%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
I E+S + ++H N+V+LL +K LV+EF+ D F S +
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIK 109
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFH--PKENDFVS 130
G+ + H+ +LH D+KP N+L++ ++DFGLA+ P
Sbjct: 110 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 166
Query: 131 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T+ Y APE++ S D++ G + EM R
Sbjct: 167 VV----TLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 13/163 (7%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
I E+S + ++H N+V+LL +K LV+EF+ D F S +
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIK 108
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFH--PKENDFVS 130
G+ + H+ +LH D+KP N+L++ ++DFGLA+ P
Sbjct: 109 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 165
Query: 131 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T+ Y APE++ S D++ G + EM R
Sbjct: 166 VV----TLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 16/164 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE ++ +V+L + S +V E+ P G + H+ R S
Sbjct: 87 EHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHL----RRIGRFSEP 142
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK +
Sbjct: 143 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL 199
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT Y+APE+I S+ + D + G+++ EM G
Sbjct: 200 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 235
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 13/163 (7%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
I E+S + ++H N+V+LL +K LV+EF+ D F S +
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIK 107
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFH--PKENDFVS 130
G+ + H+ +LH D+KP N+L++ ++DFGLA+ P
Sbjct: 108 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 164
Query: 131 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T+ Y APE++ S D++ G + EM R
Sbjct: 165 VV----TLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 73/162 (45%), Gaps = 6/162 (3%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
+ E+ + R H N++ + + + ++ ++ ++ K + Q S + +
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHIC 131
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS-I 131
G++Y+H+ +LH D+KP N+LL+ + DFGLA+ ++D +
Sbjct: 132 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFL 188
Query: 132 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T Y APE++ + G D++ G +L EM R
Sbjct: 189 TEYVATRWYRAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNR 229
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 17/160 (10%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESR-GQSCSW 68
E E+ T+ + H +V L + ++ ++YEFM G L + + ++ + +
Sbjct: 199 ETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAV 258
Query: 69 EKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVS--DFGL-AKFHPKE 125
E + +V G H +H +HLD+KP NI+ + DFGL A PK+
Sbjct: 259 EYMRQVCKGLCH----MHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ 311
Query: 126 NDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMV 165
S+ T GT + APE+ V +D++ G++
Sbjct: 312 ----SVKVTTGTAEFAAPEVAEGK--PVGYYTDMWSVGVL 345
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 13/163 (7%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
I E+S + ++H N+V+LL +K LV+EF+ D F S +
Sbjct: 54 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIK 110
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFH--PKENDFVS 130
G+ + H+ +LH D+KP N+L++ ++DFGLA+ P
Sbjct: 111 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 167
Query: 131 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T+ Y APE++ S D++ G + EM R
Sbjct: 168 VV----TLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 27/184 (14%)
Query: 1 MLENSKFSAEEFINEVSTIGRIHHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SL 52
+L++ +F E + + ++ H N+V+L F S G K+ VY +++P +
Sbjct: 53 VLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV 108
Query: 53 DRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNF-VP 111
RH + + + + KL+ + Y+H+ I H DIKP N+LLD + V
Sbjct: 109 ARH-YSRAKQTLPVIYVKLY--MYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVL 162
Query: 112 NVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEM 169
+ DFG AK + VS +R Y APELI FG S DV+ G VL E+
Sbjct: 163 KLCDFGSAKQLVRGEPNVSYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 216
Query: 170 TGGR 173
G+
Sbjct: 217 LLGQ 220
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 13/163 (7%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
I E+S + ++H N+V+LL +K LV+EF+ D F S +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKD---FMDASALTGIPLPLIK 106
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFH--PKENDFVS 130
G+ + H+ +LH D+KP N+L++ ++DFGLA+ P
Sbjct: 107 SYLFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE 163
Query: 131 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T+ Y APE++ S D++ G + EM R
Sbjct: 164 VV----TLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 27/184 (14%)
Query: 1 MLENSKFSAEEFINEVSTIGRIHHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SL 52
+L++ +F E + + ++ H N+V+L F S G K+ VY +++P +
Sbjct: 53 VLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV 108
Query: 53 DRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNF-VP 111
RH + + + + KL+ + Y+H+ I H DIKP N+LLD + V
Sbjct: 109 ARH-YSRAKQTLPVIYVKLY--MYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVL 162
Query: 112 NVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEM 169
+ DFG AK + VS +R Y APELI FG S DV+ G VL E+
Sbjct: 163 KLCDFGSAKQLVRGEPNVSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 216
Query: 170 TGGR 173
G+
Sbjct: 217 LLGQ 220
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 13/163 (7%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
I E+S + ++H N+V+LL +K LV+EF+ D F S +
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIK 109
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFH--PKENDFVS 130
G+ + H+ +LH D+KP N+L++ ++DFGLA+ P
Sbjct: 110 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 166
Query: 131 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T+ Y APE++ S D++ G + EM R
Sbjct: 167 VV----TLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 17/155 (10%)
Query: 15 EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESR-GQSCSWEKLHE 73
E+ T+ + H +V L + ++ ++YEFM G L + + ++ + + E + +
Sbjct: 98 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQ 157
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVS--DFGL-AKFHPKENDFVS 130
V G H +H +HLD+KP NI+ + DFGL A PK+ S
Sbjct: 158 VCKGLCH----MHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ----S 206
Query: 131 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMV 165
+ T GT + APE+ V +D++ G++
Sbjct: 207 VKVTTGTAEFAAPEVAEGK--PVGYYTDMWSVGVL 239
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 73/162 (45%), Gaps = 6/162 (3%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
+ E+ + R H N++ + + + ++ ++ ++ K + Q S + +
Sbjct: 69 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHIC 127
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS-I 131
G++Y+H+ +LH D+KP N+LL+ + DFGLA+ ++D +
Sbjct: 128 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFL 184
Query: 132 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T Y APE++ + G D++ G +L EM R
Sbjct: 185 TEYVATRWYRAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNR 225
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 19/136 (13%)
Query: 42 LVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEV--ASGTAHGIEYLHNGCDVCILHLDIK 99
V E++ G L HI Q +++ H V A+ A G+ +L + I++ D+K
Sbjct: 98 FVMEYVNGGDLMYHI------QQVGRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLK 148
Query: 100 PHNILLDHNFVPNVSDFGLAKFHPKEN--DFVSISATRGTIGYIAPELISRNFGTVSCKS 157
N++LD ++DFG+ KEN D V+ GT YIAPE+I+ +
Sbjct: 149 LDNVMLDSEGHIKIADFGMC----KENIWDGVTTKXFCGTPDYIAPEIIA--YQPYGKSV 202
Query: 158 DVYGFGMVLLEMTGGR 173
D + FG++L EM G+
Sbjct: 203 DWWAFGVLLYEMLAGQ 218
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 16/149 (10%)
Query: 23 HHVNVVQLLGFCSEGSKRAL-VYEFMPNGSLDRHIFPKESRG-QSCSWEKLHEVASGTAH 80
H V +V + G K L V E + G L I + RG Q+ + + E+
Sbjct: 116 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI---QDRGDQAFTEREASEIMKSIGE 172
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDH---NFVPNVSDFGLAKFHPKENDFVSISATRGT 137
I+YLH+ + I H D+KP N+L N + ++DFG AK N S++ T
Sbjct: 173 AIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYT 226
Query: 138 IGYIAPELISRNFGTVSCKSDVYGFGMVL 166
Y+APE++ SC D++ G+++
Sbjct: 227 PYYVAPEVLGPEKYDKSC--DMWSLGVIM 253
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 27/184 (14%)
Query: 1 MLENSKFSAEEFINEVSTIGRIHHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SL 52
+L++ +F E + + ++ H N+V+L F S G K+ VY +++P +
Sbjct: 65 VLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV 120
Query: 53 DRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNF-VP 111
RH + + + + KL+ + Y+H+ I H DIKP N+LLD + V
Sbjct: 121 ARH-YSRAKQTLPVIYVKLY--MYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVL 174
Query: 112 NVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEM 169
+ DFG AK + VS +R Y APELI FG S DV+ G VL E+
Sbjct: 175 KLCDFGSAKQLVRGEPNVSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 228
Query: 170 TGGR 173
G+
Sbjct: 229 LLGQ 232
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 27/184 (14%)
Query: 1 MLENSKFSAEEFINEVSTIGRIHHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SL 52
+L++ +F E + + ++ H N+V+L F S G K+ VY +++P +
Sbjct: 53 VLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV 108
Query: 53 DRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNF-VP 111
RH + + + + KL+ + Y+H+ I H DIKP N+LLD + V
Sbjct: 109 ARH-YSRAKQTLPVIYVKLY--MYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVL 162
Query: 112 NVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEM 169
+ DFG AK + VS +R Y APELI FG S DV+ G VL E+
Sbjct: 163 KLCDFGSAKQLVRGEPNVSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 216
Query: 170 TGGR 173
G+
Sbjct: 217 LLGQ 220
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 73/162 (45%), Gaps = 6/162 (3%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
+ E+ + R H N++ + + + ++ ++ ++ K + Q S + +
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHIC 131
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS-I 131
G++Y+H+ +LH D+KP N+LL+ + DFGLA+ ++D +
Sbjct: 132 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFL 188
Query: 132 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T Y APE++ + G D++ G +L EM R
Sbjct: 189 TEYVATRWYRAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNR 229
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 27/184 (14%)
Query: 1 MLENSKFSAEEFINEVSTIGRIHHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SL 52
+L++ +F E + + ++ H N+V+L F S G K+ VY +++P +
Sbjct: 54 VLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV 109
Query: 53 DRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNF-VP 111
RH + + + + KL+ + Y+H+ I H DIKP N+LLD + V
Sbjct: 110 ARH-YSRAKQTLPVIYVKLY--MYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVL 163
Query: 112 NVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEM 169
+ DFG AK + VS +R Y APELI FG S DV+ G VL E+
Sbjct: 164 KLCDFGSAKQLVRGEPNVSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 217
Query: 170 TGGR 173
G+
Sbjct: 218 LLGQ 221
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 27/184 (14%)
Query: 1 MLENSKFSAEEFINEVSTIGRIHHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SL 52
+L++ +F E + + ++ H N+V+L F S G K+ VY +++P +
Sbjct: 72 VLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV 127
Query: 53 DRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNF-VP 111
RH + + + + KL+ + Y+H+ I H DIKP N+LLD + V
Sbjct: 128 ARH-YSRAKQTLPVIYVKLY--MYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVL 181
Query: 112 NVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEM 169
+ DFG AK + VS +R Y APELI FG S DV+ G VL E+
Sbjct: 182 KLCDFGSAKQLVRGEPNVSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 235
Query: 170 TGGR 173
G+
Sbjct: 236 LLGQ 239
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 27/184 (14%)
Query: 1 MLENSKFSAEEFINEVSTIGRIHHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SL 52
+L++ +F E + + ++ H N+V+L F S G K+ VY +++P +
Sbjct: 87 VLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV 142
Query: 53 DRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNF-VP 111
RH + + + + KL+ + Y+H+ I H DIKP N+LLD + V
Sbjct: 143 ARH-YSRAKQTLPVIYVKLYMYQ--LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVL 196
Query: 112 NVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEM 169
+ DFG AK + VS +R Y APELI FG S DV+ G VL E+
Sbjct: 197 KLCDFGSAKQLVRGEPNVSYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 250
Query: 170 TGGR 173
G+
Sbjct: 251 LLGQ 254
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 13/163 (7%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
I E+S + ++H N+V+LL +K LV+EF+ D F S +
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIK 107
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFH--PKENDFVS 130
G+ + H+ +LH D+KP N+L++ ++DFGLA+ P
Sbjct: 108 SYLFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE 164
Query: 131 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T+ Y APE++ S D++ G + EM R
Sbjct: 165 VV----TLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 27/184 (14%)
Query: 1 MLENSKFSAEEFINEVSTIGRIHHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SL 52
+L++ +F E + + ++ H N+V+L F S G K+ VY +++P +
Sbjct: 61 VLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV 116
Query: 53 DRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNF-VP 111
RH + + + + KL+ + Y+H+ I H DIKP N+LLD + V
Sbjct: 117 ARH-YSRAKQTLPVIYVKLY--MYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVL 170
Query: 112 NVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEM 169
+ DFG AK + VS +R Y APELI FG S DV+ G VL E+
Sbjct: 171 KLCDFGSAKQLVRGEPNVSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 224
Query: 170 TGGR 173
G+
Sbjct: 225 LLGQ 228
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 19/136 (13%)
Query: 42 LVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEV--ASGTAHGIEYLHNGCDVCILHLDIK 99
V E++ G L HI Q +++ H V A+ A G+ +L + I++ D+K
Sbjct: 419 FVMEYVNGGDLMYHI------QQVGRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLK 469
Query: 100 PHNILLDHNFVPNVSDFGLAKFHPKEN--DFVSISATRGTIGYIAPELISRNFGTVSCKS 157
N++LD ++DFG+ KEN D V+ GT YIAPE+I+ +
Sbjct: 470 LDNVMLDSEGHIKIADFGMC----KENIWDGVTTKXFCGTPDYIAPEIIA--YQPYGKSV 523
Query: 158 DVYGFGMVLLEMTGGR 173
D + FG++L EM G+
Sbjct: 524 DWWAFGVLLYEMLAGQ 539
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 73/162 (45%), Gaps = 6/162 (3%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
+ E+ + R H N++ + + + ++ ++ ++ K + Q S + +
Sbjct: 69 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHIC 127
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS-I 131
G++Y+H+ +LH D+KP N+LL+ + DFGLA+ ++D +
Sbjct: 128 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFL 184
Query: 132 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T Y APE++ + G D++ G +L EM R
Sbjct: 185 TEYVATRWYRAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNR 225
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 27/184 (14%)
Query: 1 MLENSKFSAEEFINEVSTIGRIHHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SL 52
+L++ +F E + + ++ H N+V+L F S G K+ VY +++P +
Sbjct: 65 VLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV 120
Query: 53 DRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNF-VP 111
RH + + + + KL+ + Y+H+ I H DIKP N+LLD + V
Sbjct: 121 ARH-YSRAKQTLPVIYVKLY--MYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVL 174
Query: 112 NVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEM 169
+ DFG AK + VS +R Y APELI FG S DV+ G VL E+
Sbjct: 175 KLCDFGSAKQLVRGEPNVSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 228
Query: 170 TGGR 173
G+
Sbjct: 229 LLGQ 232
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 21/135 (15%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV----------- 129
+ Y+H+ I+H ++KP NI +D + + DFGLAK + D +
Sbjct: 128 ALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 130 -SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM-----TGGRRNSNLKATRS 183
++++ GT Y+A E++ G + K D Y G++ E TG R + LK RS
Sbjct: 185 DNLTSAIGTAXYVATEVLD-GTGHYNEKIDXYSLGIIFFEXIYPFSTGXERVNILKKLRS 243
Query: 184 SKAYFPSWVSDQLNK 198
FP D K
Sbjct: 244 VSIEFPPDFDDNKXK 258
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 16/164 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E++ G + H+ R S
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEP 141
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK K +
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTW- 196
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT Y+APE+I S+ + D + G+++ EM G
Sbjct: 197 ---XLXGTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 27/184 (14%)
Query: 1 MLENSKFSAEEFINEVSTIGRIHHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SL 52
+L++ +F E + + ++ H N+V+L F S G K+ VY +++P +
Sbjct: 58 VLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV 113
Query: 53 DRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNF-VP 111
RH + + + + KL+ + Y+H+ I H DIKP N+LLD + V
Sbjct: 114 ARH-YSRAKQTLPVIYVKLYMYQ--LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVL 167
Query: 112 NVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEM 169
+ DFG AK + VS +R Y APELI FG S DV+ G VL E+
Sbjct: 168 KLCDFGSAKQLVRGEPNVSYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 221
Query: 170 TGGR 173
G+
Sbjct: 222 LLGQ 225
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 18/179 (10%)
Query: 23 HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGI 82
+H + QL + V EF+ G L HI ++SR + + + A+ +
Sbjct: 82 NHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI--QKSRRFDEARARFY--AAEIISAL 137
Query: 83 EYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIA 142
+LH D I++ D+K N+LLDH ++DFG+ K + V+ + GT YIA
Sbjct: 138 MFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGTPDYIA 192
Query: 143 PELISRNFGTVSCKSDVYGFGMVLLEMTGGR-------RNSNLKATRSSKAYFPSWVSD 194
PE++ + D + G++L EM G + +A + + +P+W+ +
Sbjct: 193 PEILQEMLYGPAV--DWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHE 249
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 27/184 (14%)
Query: 1 MLENSKFSAEEFINEVSTIGRIHHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SL 52
+L++ +F E + + ++ H N+V+L F S G K+ VY +++P +
Sbjct: 66 VLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV 121
Query: 53 DRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNF-VP 111
RH + + + + KL+ + Y+H+ I H DIKP N+LLD + V
Sbjct: 122 ARH-YSRAKQTLPVIYVKLY--MYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVL 175
Query: 112 NVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEM 169
+ DFG AK + VS +R Y APELI FG S DV+ G VL E+
Sbjct: 176 KLCDFGSAKQLVRGEPNVSYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 229
Query: 170 TGGR 173
G+
Sbjct: 230 LLGQ 233
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 97/222 (43%), Gaps = 23/222 (10%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG 63
S + +E ++E + + + +V +LLG C + + L+ + MP G L ++ +E +
Sbjct: 58 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV--REHKD 114
Query: 64 QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHP 123
S + L A G+ YL D ++H D+ N+L+ ++DFG AK
Sbjct: 115 NIGS-QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLG 170
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKATRS 183
E + I ++A E I T +SDV+ +G+ + E+ T
Sbjct: 171 AEEKEYHAEGGKVPIKWMALESILHRIYT--HQSDVWSYGVTVWELM----------TFG 218
Query: 184 SKAY--FP-SWVSDQLNKGGNLELRNVTEIE-SMIARKLCVI 221
SK Y P S +S L KG L + I+ MI RK +I
Sbjct: 219 SKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWMI 260
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 13/163 (7%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
I E+S + ++H N+V+LL +K LV+EF+ D F S +
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIK 108
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFH--PKENDFVS 130
G+ + H+ +LH D+KP N+L++ ++DFGLA+ P
Sbjct: 109 SYLFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE 165
Query: 131 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T+ Y APE++ S D++ G + EM R
Sbjct: 166 VV----TLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 16/149 (10%)
Query: 23 HHVNVVQLLGFCSEGSKRAL-VYEFMPNGSLDRHIFPKESRG-QSCSWEKLHEVASGTAH 80
H V +V + G K L V E + G L I + RG Q+ + + E+
Sbjct: 72 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI---QDRGDQAFTEREASEIMKSIGE 128
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDH---NFVPNVSDFGLAKFHPKENDFVSISATRGT 137
I+YLH+ + I H D+KP N+L N + ++DFG AK N S++ T
Sbjct: 129 AIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYT 182
Query: 138 IGYIAPELISRNFGTVSCKSDVYGFGMVL 166
Y+APE++ SC D++ G+++
Sbjct: 183 PYYVAPEVLGPEKYDKSC--DMWSLGVIM 209
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 16/149 (10%)
Query: 23 HHVNVVQLLGFCSEGSKRAL-VYEFMPNGSLDRHIFPKESRG-QSCSWEKLHEVASGTAH 80
H V +V + G K L V E + G L I + RG Q+ + + E+
Sbjct: 122 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI---QDRGDQAFTEREASEIMKSIGE 178
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDH---NFVPNVSDFGLAKFHPKENDFVSISATRGT 137
I+YLH+ + I H D+KP N+L N + ++DFG AK N S++ T
Sbjct: 179 AIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYT 232
Query: 138 IGYIAPELISRNFGTVSCKSDVYGFGMVL 166
Y+APE++ SC D++ G+++
Sbjct: 233 PYYVAPEVLGPEKYDKSC--DMWSLGVIM 259
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 27/184 (14%)
Query: 1 MLENSKFSAEEFINEVSTIGRIHHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SL 52
+L++ +F E + + ++ H N+V+L F S G K+ VY +++P +
Sbjct: 81 VLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV 136
Query: 53 DRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNF-VP 111
RH + + + + KL+ + Y+H+ I H DIKP N+LLD + V
Sbjct: 137 ARH-YSRAKQTLPVIYVKLYMYQ--LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVL 190
Query: 112 NVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEM 169
+ DFG AK + VS +R Y APELI FG S DV+ G VL E+
Sbjct: 191 KLCDFGSAKQLVRGEPNVSYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 244
Query: 170 TGGR 173
G+
Sbjct: 245 LLGQ 248
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 27/184 (14%)
Query: 1 MLENSKFSAEEFINEVSTIGRIHHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SL 52
+L++ +F E + + ++ H N+V+L F S G K+ VY +++P +
Sbjct: 87 VLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV 142
Query: 53 DRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNF-VP 111
RH + + + + KL+ + Y+H+ I H DIKP N+LLD + V
Sbjct: 143 ARH-YSRAKQTLPVIYVKLYMYQ--LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVL 196
Query: 112 NVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEM 169
+ DFG AK + VS +R Y APELI FG S DV+ G VL E+
Sbjct: 197 KLCDFGSAKQLVRGEPNVSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 250
Query: 170 TGGR 173
G+
Sbjct: 251 LLGQ 254
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGS----KRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E+ + H N++ + +G+ + L+ ++ NGSL ++ + + +
Sbjct: 80 TEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL-----KSTTLDAK 134
Query: 70 KLHEVASGTAHGIEYLHNGC-----DVCILHLDIKPHNILLDHNFVPNVSDFGLA-KFHP 123
+ ++A + G+ +LH I H D+K NIL+ N ++D GLA KF
Sbjct: 135 SMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFIS 194
Query: 124 KENDFVSISATR-GTIGYIAPEL----ISRNFGTVSCKSDVYGFGMVLLEM 169
N+ TR GT Y+ PE+ ++RN +D+Y FG++L E+
Sbjct: 195 DTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 32/179 (17%)
Query: 22 IHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHG 81
+ H N+V+L SE LV++ + G L I +E ++ + +H++ H
Sbjct: 87 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHI 146
Query: 82 IEYLHNGCDVCILHLDIKPHNILLDHN---FVPNVSDFGLA-KFHPKENDFVSISATRGT 137
+ H+ I+H D+KP N+LL ++DFGLA + ++ + + GT
Sbjct: 147 --HQHD-----IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFA---GT 196
Query: 138 IGYIAPELISRN-FGTVSCKSDVYGFGMVLLEMTGGRRNSNLKATRSSKAYFPSWVSDQ 195
GY++PE++ ++ +G D++ G++L + G Y P W DQ
Sbjct: 197 PGYLSPEVLRKDPYGK---PVDIWACGVILYILLVG--------------YPPFWDEDQ 238
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 16/155 (10%)
Query: 23 HHVNVVQLLGFCSEGSKRAL-VYEFMPNGSLDRHIFPKESRG-QSCSWEKLHEVASGTAH 80
H V +V + G K L V E + G L I + RG Q+ + + E+
Sbjct: 71 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI---QDRGDQAFTEREASEIMKSIGE 127
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDH---NFVPNVSDFGLAKFHPKENDFVSISATRGT 137
I+YLH+ + I H D+KP N+L N + ++DFG AK N S++ T
Sbjct: 128 AIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYT 181
Query: 138 IGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
Y+APE++ SC D++ G+++ + G
Sbjct: 182 PYYVAPEVLGPEKYDKSC--DMWSLGVIMYILLCG 214
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 27/184 (14%)
Query: 1 MLENSKFSAEEFINEVSTIGRIHHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SL 52
+L++ +F E + + ++ H N+V+L F S G K+ VY +++P +
Sbjct: 57 VLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV 112
Query: 53 DRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNF-VP 111
RH + + + + KL+ + Y+H+ I H DIKP N+LLD + V
Sbjct: 113 ARH-YSRAKQTLPVIYVKLY--MYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVL 166
Query: 112 NVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEM 169
+ DFG AK + VS +R Y APELI FG S DV+ G VL E+
Sbjct: 167 KLCDFGSAKQLVRGEPNVSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 220
Query: 170 TGGR 173
G+
Sbjct: 221 LLGQ 224
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 16/149 (10%)
Query: 23 HHVNVVQLLGFCSEGSKRAL-VYEFMPNGSLDRHIFPKESRG-QSCSWEKLHEVASGTAH 80
H V +V + G K L V E + G L I + RG Q+ + + E+
Sbjct: 70 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI---QDRGDQAFTEREASEIMKSIGE 126
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDH---NFVPNVSDFGLAKFHPKENDFVSISATRGT 137
I+YLH+ + I H D+KP N+L N + ++DFG AK N S++ T
Sbjct: 127 AIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYT 180
Query: 138 IGYIAPELISRNFGTVSCKSDVYGFGMVL 166
Y+APE++ SC D++ G+++
Sbjct: 181 PYYVAPEVLGPEKYDKSC--DMWSLGVIM 207
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 16/155 (10%)
Query: 23 HHVNVVQLLGFCSEGSKRAL-VYEFMPNGSLDRHIFPKESRG-QSCSWEKLHEVASGTAH 80
H V +V + G K L V E + G L I + RG Q+ + + E+
Sbjct: 72 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI---QDRGDQAFTEREASEIMKSIGE 128
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDH---NFVPNVSDFGLAKFHPKENDFVSISATRGT 137
I+YLH+ + I H D+KP N+L N + ++DFG AK N S++ T
Sbjct: 129 AIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYT 182
Query: 138 IGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
Y+APE++ SC D++ G+++ + G
Sbjct: 183 PYYVAPEVLGPEKYDKSC--DMWSLGVIMYILLCG 215
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 27/184 (14%)
Query: 1 MLENSKFSAEEFINEVSTIGRIHHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SL 52
+L++ +F E + + ++ H N+V+L F S G K+ VY +++P +
Sbjct: 89 VLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV 144
Query: 53 DRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNF-VP 111
RH + + + + KL+ + Y+H+ I H DIKP N+LLD + V
Sbjct: 145 ARH-YSRAKQTLPVIYVKLYMYQ--LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVL 198
Query: 112 NVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEM 169
+ DFG AK + VS +R Y APELI FG S DV+ G VL E+
Sbjct: 199 KLCDFGSAKQLVRGEPNVSYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 252
Query: 170 TGGR 173
G+
Sbjct: 253 LLGQ 256
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 16/155 (10%)
Query: 23 HHVNVVQLLGFCSEGSKRAL-VYEFMPNGSLDRHIFPKESRG-QSCSWEKLHEVASGTAH 80
H V +V + G K L V E + G L I + RG Q+ + + E+
Sbjct: 77 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI---QDRGDQAFTEREASEIMKSIGE 133
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDH---NFVPNVSDFGLAKFHPKENDFVSISATRGT 137
I+YLH+ + I H D+KP N+L N + ++DFG AK N S++ T
Sbjct: 134 AIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYT 187
Query: 138 IGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
Y+APE++ SC D++ G+++ + G
Sbjct: 188 PYYVAPEVLGPEKYDKSC--DMWSLGVIMYILLCG 220
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 80/170 (47%), Gaps = 23/170 (13%)
Query: 15 EVSTIGRIHHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SLDRHIFPKESRGQSC 66
E+ + ++ H N+V+L F S G K+ VY +++P + RH + + +
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPV 121
Query: 67 SWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNF-VPNVSDFGLAKFHPKE 125
+ KL+ + Y+H+ I H DIKP N+LLD + V + DFG AK +
Sbjct: 122 IYVKLY--MYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
Query: 126 NDFVSISATRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMTGGR 173
VS +R Y APELI FG S DV+ G VL E+ G+
Sbjct: 177 EPNVSYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 80/170 (47%), Gaps = 23/170 (13%)
Query: 15 EVSTIGRIHHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SLDRHIFPKESRGQSC 66
E+ + ++ H N+V+L F S G K+ VY +++P + RH + + +
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPV 121
Query: 67 SWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNF-VPNVSDFGLAKFHPKE 125
+ KL+ + Y+H+ I H DIKP N+LLD + V + DFG AK +
Sbjct: 122 IYVKLY--MYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
Query: 126 NDFVSISATRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMTGGR 173
VS +R Y APELI FG S DV+ G VL E+ G+
Sbjct: 177 EPNVSYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 73/162 (45%), Gaps = 6/162 (3%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
+ E+ + R H N++ + + + ++ ++ ++ K + Q S + +
Sbjct: 67 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHIC 125
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS-I 131
G++Y+H+ +LH D+KP N+LL+ + DFGLA+ ++D +
Sbjct: 126 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 182
Query: 132 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T Y APE++ + G D++ G +L EM R
Sbjct: 183 TEYVATRWYRAPEIMLNSKGYTK-SIDIWSVGCILAEMLSNR 223
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 16/149 (10%)
Query: 23 HHVNVVQLLGFCSEGSKRAL-VYEFMPNGSLDRHIFPKESRG-QSCSWEKLHEVASGTAH 80
H V +V + G K L V E + G L I + RG Q+ + + E+
Sbjct: 86 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI---QDRGDQAFTEREASEIMKSIGE 142
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDH---NFVPNVSDFGLAKFHPKENDFVSISATRGT 137
I+YLH+ + I H D+KP N+L N + ++DFG AK N S++ T
Sbjct: 143 AIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYT 196
Query: 138 IGYIAPELISRNFGTVSCKSDVYGFGMVL 166
Y+APE++ SC D++ G+++
Sbjct: 197 PYYVAPEVLGPEKYDKSC--DMWSLGVIM 223
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 73/162 (45%), Gaps = 6/162 (3%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
+ E+ + R H N++ + + + ++ ++ ++ K + Q S + +
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHIC 131
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS-I 131
G++Y+H+ +LH D+KP N+LL+ + DFGLA+ ++D +
Sbjct: 132 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 188
Query: 132 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T Y APE++ + G D++ G +L EM R
Sbjct: 189 TEYVATRWYRAPEIMLNSKGYTK-SIDIWSVGCILAEMLSNR 229
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 73/162 (45%), Gaps = 6/162 (3%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
+ E+ + R H N++ + + + ++ ++ ++ K + Q S + +
Sbjct: 74 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHIC 132
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS-I 131
G++Y+H+ +LH D+KP N+LL+ + DFGLA+ ++D +
Sbjct: 133 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 189
Query: 132 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T Y APE++ + G D++ G +L EM R
Sbjct: 190 TEYVATRWYRAPEIMLNSKGYTK-SIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 73/162 (45%), Gaps = 6/162 (3%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
+ E+ + R H N++ + + + ++ ++ ++ K + Q S + +
Sbjct: 75 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHIC 133
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS-I 131
G++Y+H+ +LH D+KP N+LL+ + DFGLA+ ++D +
Sbjct: 134 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 190
Query: 132 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T Y APE++ + G D++ G +L EM R
Sbjct: 191 TEYVATRWYRAPEIMLNSKGYTK-SIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 73/162 (45%), Gaps = 6/162 (3%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
+ E+ + R H N++ + + + ++ ++ ++ K + Q S + +
Sbjct: 66 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHIC 124
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS-I 131
G++Y+H+ +LH D+KP N+LL+ + DFGLA+ ++D +
Sbjct: 125 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 181
Query: 132 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T Y APE++ + G D++ G +L EM R
Sbjct: 182 TEYVATRWYRAPEIMLNSKGYTK-SIDIWSVGCILAEMLSNR 222
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 16/155 (10%)
Query: 23 HHVNVVQLLGFCSEGSKRAL-VYEFMPNGSLDRHIFPKESRG-QSCSWEKLHEVASGTAH 80
H V +V + G K L V E + G L I + RG Q+ + + E+
Sbjct: 76 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI---QDRGDQAFTEREASEIMKSIGE 132
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDH---NFVPNVSDFGLAKFHPKENDFVSISATRGT 137
I+YLH+ + I H D+KP N+L N + ++DFG AK N S++ T
Sbjct: 133 AIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYT 186
Query: 138 IGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
Y+APE++ SC D++ G+++ + G
Sbjct: 187 PYYVAPEVLGPEKYDKSC--DMWSLGVIMYILLCG 219
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 16/149 (10%)
Query: 23 HHVNVVQLLGFCSEGSKRAL-VYEFMPNGSLDRHIFPKESRG-QSCSWEKLHEVASGTAH 80
H V +V + G K L V E + G L I + RG Q+ + + E+
Sbjct: 78 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI---QDRGDQAFTEREASEIMKSIGE 134
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDH---NFVPNVSDFGLAKFHPKENDFVSISATRGT 137
I+YLH+ + I H D+KP N+L N + ++DFG AK N S++ T
Sbjct: 135 AIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYT 188
Query: 138 IGYIAPELISRNFGTVSCKSDVYGFGMVL 166
Y+APE++ SC D++ G+++
Sbjct: 189 PYYVAPEVLGPEKYDKSC--DMWSLGVIM 215
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 73/162 (45%), Gaps = 6/162 (3%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
+ E+ + R H N++ + + + ++ ++ ++ K + Q S + +
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHIC 131
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS-I 131
G++Y+H+ +LH D+KP N+LL+ + DFGLA+ ++D +
Sbjct: 132 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 188
Query: 132 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T Y APE++ + G D++ G +L EM R
Sbjct: 189 TEYVATRWYRAPEIMLNSKGYTK-SIDIWSVGCILAEMLSNR 229
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 73/162 (45%), Gaps = 6/162 (3%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
+ E+ + R H N++ + + + ++ ++ ++ K + Q S + +
Sbjct: 69 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHIC 127
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS-I 131
G++Y+H+ +LH D+KP N+LL+ + DFGLA+ ++D +
Sbjct: 128 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 184
Query: 132 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T Y APE++ + G D++ G +L EM R
Sbjct: 185 TEYVATRWYRAPEIMLNSKGYTK-SIDIWSVGCILAEMLSNR 225
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 27/184 (14%)
Query: 1 MLENSKFSAEEFINEVSTIGRIHHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SL 52
+L++ +F E + + ++ H N+V+L F S G K+ VY +++P +
Sbjct: 91 VLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV 146
Query: 53 DRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNF-VP 111
RH + + + + KL+ + Y+H+ I H DIKP N+LLD + V
Sbjct: 147 ARH-YSRAKQTLPVIYVKLYMYQ--LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVL 200
Query: 112 NVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEM 169
+ DFG AK + VS +R Y APELI FG S DV+ G VL E+
Sbjct: 201 KLCDFGSAKQLVRGEPNVSYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 254
Query: 170 TGGR 173
G+
Sbjct: 255 LLGQ 258
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 73/162 (45%), Gaps = 6/162 (3%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
+ E+ + R H N++ + + + ++ ++ ++ K + Q S + +
Sbjct: 67 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHIC 125
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS-I 131
G++Y+H+ +LH D+KP N+LL+ + DFGLA+ ++D +
Sbjct: 126 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 182
Query: 132 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T Y APE++ + G D++ G +L EM R
Sbjct: 183 TEYVATRWYRAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNR 223
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 73/162 (45%), Gaps = 6/162 (3%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
+ E+ + R H N++ + + + ++ ++ ++ K + Q S + +
Sbjct: 77 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHIC 135
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS-I 131
G++Y+H+ +LH D+KP N+LL+ + DFGLA+ ++D +
Sbjct: 136 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 192
Query: 132 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T Y APE++ + G D++ G +L EM R
Sbjct: 193 TEYVATRWYRAPEIMLNSKGYTK-SIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 73/162 (45%), Gaps = 6/162 (3%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
+ E+ + R H N++ + + + ++ ++ ++ K + Q S + +
Sbjct: 69 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHIC 127
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS-I 131
G++Y+H+ +LH D+KP N+LL+ + DFGLA+ ++D +
Sbjct: 128 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 184
Query: 132 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T Y APE++ + G D++ G +L EM R
Sbjct: 185 TEYVATRWYRAPEIMLNSKGYTK-SIDIWSVGCILAEMLSNR 225
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 27/184 (14%)
Query: 1 MLENSKFSAEEFINEVSTIGRIHHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SL 52
+L++ +F E + + ++ H N+V+L F S G K+ VY +++P +
Sbjct: 132 VLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV 187
Query: 53 DRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNF-VP 111
RH + + + + KL+ + Y+H+ I H DIKP N+LLD + V
Sbjct: 188 ARH-YSRAKQTLPVIYVKLYMYQ--LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVL 241
Query: 112 NVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEM 169
+ DFG AK + VS +R Y APELI FG S DV+ G VL E+
Sbjct: 242 KLCDFGSAKQLVRGEPNVSYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 295
Query: 170 TGGR 173
G+
Sbjct: 296 LLGQ 299
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 73/162 (45%), Gaps = 6/162 (3%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
+ E+ + R H N++ + + + ++ ++ ++ K + Q S + +
Sbjct: 71 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHIC 129
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS-I 131
G++Y+H+ +LH D+KP N+LL+ + DFGLA+ ++D +
Sbjct: 130 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 186
Query: 132 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T Y APE++ + G D++ G +L EM R
Sbjct: 187 TEYVATRWYRAPEIMLNSKGYTK-SIDIWSVGCILAEMLSNR 227
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 97/222 (43%), Gaps = 23/222 (10%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG 63
S + +E ++E + + + +V +LLG C + + L+ + MP G L ++ +E +
Sbjct: 58 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV--REHKD 114
Query: 64 QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHP 123
S + L A G+ YL D ++H D+ N+L+ ++DFG AK
Sbjct: 115 NIGS-QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLG 170
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKATRS 183
E + I ++A E I T +SDV+ +G+ + E+ T
Sbjct: 171 AEEKEYHAEGGKVPIKWMALESILHRIYT--HQSDVWSYGVTVWELM----------TFG 218
Query: 184 SKAY--FP-SWVSDQLNKGGNLELRNVTEIE-SMIARKLCVI 221
SK Y P S +S L KG L + I+ MI RK +I
Sbjct: 219 SKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWMI 260
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 16/164 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ + +L + S +V E+ P G + H+ R S
Sbjct: 87 EHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFSEP 142
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+++D V+DFG AK +
Sbjct: 143 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL 199
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT Y+APE+I S+ + D + G+++ EM G
Sbjct: 200 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 235
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 16/164 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ + +L + S +V E+ P G + H+ R S
Sbjct: 87 EHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFSEP 142
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+++D V+DFG AK +
Sbjct: 143 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL 199
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT Y+APE+I S+ + D + G+++ EM G
Sbjct: 200 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 235
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 90/213 (42%), Gaps = 33/213 (15%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E++ G + H+ R S
Sbjct: 107 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEP 162
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK
Sbjct: 163 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------R 211
Query: 130 SISATR---GTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG-------RRNSNL 178
AT GT Y+APE+I S+ + D + G+++ EM G +
Sbjct: 212 VKGATWTLCGTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPPFFADQPIQIY 268
Query: 179 KATRSSKAYFPSWVSDQLNKGGNLELRNVTEIE 211
+ S K FPS S L LRN+ +++
Sbjct: 269 EKIVSGKVRFPSHFSSDLKD----LLRNLLQVD 297
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 16/155 (10%)
Query: 23 HHVNVVQLLGFCSEGSKRAL-VYEFMPNGSLDRHIFPKESRG-QSCSWEKLHEVASGTAH 80
H V +V + G K L V E + G L I + RG Q+ + + E+
Sbjct: 70 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI---QDRGDQAFTEREASEIMKSIGE 126
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDH---NFVPNVSDFGLAKFHPKENDFVSISATRGT 137
I+YLH+ + I H D+KP N+L N + ++DFG AK N S++ T
Sbjct: 127 AIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTEPCYT 180
Query: 138 IGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
Y+APE++ SC D++ G+++ + G
Sbjct: 181 PYYVAPEVLGPEKYDKSC--DMWSLGVIMYILLCG 213
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 16/164 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E++ G + H+ R S
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEP 141
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK +
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT Y+APE+I S+ + D + G+++ EM G
Sbjct: 199 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 73/162 (45%), Gaps = 6/162 (3%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
+ E+ + R H N++ + + + ++ ++ ++ K + Q S + +
Sbjct: 89 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHIC 147
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS-I 131
G++Y+H+ +LH D+KP N+LL+ + DFGLA+ ++D +
Sbjct: 148 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 204
Query: 132 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T Y APE++ + G D++ G +L EM R
Sbjct: 205 TEYVATRWYRAPEIMLNSKGYTK-SIDIWSVGCILAEMLSNR 245
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 73/162 (45%), Gaps = 6/162 (3%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
+ E+ + R H N++ + + + ++ ++ ++ K + Q S + +
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKCQHLSNDHIC 131
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS-I 131
G++Y+H+ +LH D+KP N+LL+ + DFGLA+ ++D +
Sbjct: 132 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 188
Query: 132 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T Y APE++ + G D++ G +L EM R
Sbjct: 189 TEYVATRWYRAPEIMLNSKGYTK-SIDIWSVGCILAEMLSNR 229
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 16/164 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E++ G + H+ R S
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEP 141
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK +
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT Y+APE+I S+ + D + G+++ EM G
Sbjct: 199 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 16/164 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E+ P G + H+ R
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFXEP 141
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+++D V+DFG AK +
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL 198
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT Y+APE+I S+ + D + G+++ EM G
Sbjct: 199 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 16/164 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E++ G + H+ R S
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEP 141
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK +
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT Y+APE+I S+ + D + G+++ EM G
Sbjct: 199 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 16/164 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E++ G + H+ R S
Sbjct: 87 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEP 142
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK +
Sbjct: 143 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 199
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT Y+APE+I S+ + D + G+++ EM G
Sbjct: 200 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 235
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 80/170 (47%), Gaps = 23/170 (13%)
Query: 15 EVSTIGRIHHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SLDRHIFPKESRGQSC 66
E+ + ++ H N+V+L F S G K+ VY +++P + RH + + +
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARH-YSRAKQTLPV 121
Query: 67 SWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNF-VPNVSDFGLAKFHPKE 125
+ KL+ + Y+H+ I H DIKP N+LLD + V + DFG AK +
Sbjct: 122 IYVKLY--MYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
Query: 126 NDFVSISATRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMTGGR 173
VS +R Y APELI FG S DV+ G VL E+ G+
Sbjct: 177 EPNVSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 16/164 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E++ G + H+ R S
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEP 141
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK +
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT Y+APE+I S+ + D + G+++ EM G
Sbjct: 199 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 72/162 (44%), Gaps = 6/162 (3%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
+ E+ + R H N++ + + + ++ ++ ++ K + Q S + +
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHIC 131
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS-I 131
G++Y+H+ +LH D+KP N+LL+ + DFGLA+ ++D +
Sbjct: 132 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 188
Query: 132 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
T Y APE++ + G D++ G +L EM R
Sbjct: 189 XEXVATRWYRAPEIMLNSKGYTK-SIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 72/162 (44%), Gaps = 6/162 (3%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
+ E+ + R H N++ + + + ++ ++ ++ K + Q S + +
Sbjct: 74 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHIC 132
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS-I 131
G++Y+H+ +LH D+KP N+LL+ + DFGLA+ ++D +
Sbjct: 133 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 189
Query: 132 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
T Y APE++ + G D++ G +L EM R
Sbjct: 190 XEXVATRWYRAPEIMLNSKGYTK-SIDIWSVGCILAEMLSNR 230
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 16/164 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E++ G + H+ R S
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEP 141
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK +
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT Y+APE+I S+ + D + G+++ EM G
Sbjct: 199 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 27 VVQLLGFCSEGSKRALVYEFMPNGSL----DRHIFPKESRGQSCSWEKLHEVASGTAHGI 82
VVQL + +V E+MP G L + P++ W K + TA +
Sbjct: 137 VVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEK-------WAKFY-----TAEVV 184
Query: 83 EYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIA 142
L + ++H D+KP N+LLD + ++DFG E V GT YI+
Sbjct: 185 LALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTC-MKMDETGMVHCDTAVGTPDYIS 243
Query: 143 PELISRNFGT--VSCKSDVYGFGMVLLEMTGG 172
PE++ G + D + G+ L EM G
Sbjct: 244 PEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 16/164 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E++ G + H+ R S
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEP 141
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK +
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT Y+APE+I S+ + D + G+++ EM G
Sbjct: 199 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 25/158 (15%)
Query: 22 IHHVNVVQLLGFC----------SEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKL 71
+H + V++L C S+ L+ E+ G + P+ + S +
Sbjct: 76 LHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPE--LAEMVSENDV 133
Query: 72 HEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVP----NVSDFGLAKFHPKEND 127
+ G+ YLH I+HLD+KP NILL + P + DFG+++ K
Sbjct: 134 IRLIKQILEGVYYLHQNN---IVHLDLKPQNILLS-SIYPLGDIKIVDFGMSR---KIGH 186
Query: 128 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMV 165
+ GT Y+APE++ N+ ++ +D++ G++
Sbjct: 187 ACELREIMGTPEYLAPEIL--NYDPITTATDMWNIGII 222
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 27/210 (12%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E++ G + H+ R S
Sbjct: 73 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEP 128
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK +
Sbjct: 129 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXL 185
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG-------RRNSNLKAT 181
GT Y+APE+I S+ + D + G+++ EM G + +
Sbjct: 186 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 237
Query: 182 RSSKAYFPSWVSDQLNKGGNLELRNVTEIE 211
S K FPS S L LRN+ +++
Sbjct: 238 VSGKVRFPSHFSSDLKDL----LRNLLQVD 263
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 19/88 (21%)
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPN--------VSDFGL-AKF 121
L + SG AH LH+ + I+H D+KPHNIL+ +PN +SDFGL K
Sbjct: 124 LQQTTSGLAH----LHS---LNIVHRDLKPHNILIS---MPNAHGKIKAMISDFGLCKKL 173
Query: 122 HPKENDFVSISATRGTIGYIAPELISRN 149
+ F S GT G+IAPE++S +
Sbjct: 174 AVGRHSFSRRSGVPGTEGWIAPEMLSED 201
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 25/178 (14%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCS------EGSKRALVYEFMPN--GSLDRH 55
S+ A+ E+ + + H NV+ LL + + + LV FM G L +H
Sbjct: 63 QSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH 122
Query: 56 IFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSD 115
E R Q ++ L G+ Y+H I+H D+KP N+ ++ + + D
Sbjct: 123 EKLGEDRIQFLVYQMLK--------GLRYIHAAG---IIHRDLKPGNLAVNEDCELKILD 171
Query: 116 FGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
FGLA+ +++ TR Y APE+I N+ + D++ G ++ EM G+
Sbjct: 172 FGLAR--QADSEMXGXVVTR---WYRAPEVIL-NWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
I E+S + + H N+V+L + LV+E + + L + + E +S + +
Sbjct: 48 IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSF- 105
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK-FHPKENDFVSI 131
+GI Y H D +LH D+KP N+L++ ++DFGLA+ F +
Sbjct: 106 --LLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE 160
Query: 132 SATRGTIGYIAPELI--SRNFGTVSCKSDVYGFGMVLLEMTGG 172
T+ Y AP+++ S+ + T D++ G + EM G
Sbjct: 161 VV---TLWYRAPDVLMGSKKYSTT---IDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
I E+S + + H N+V+L + LV+E + + L + + E +S + +
Sbjct: 48 IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSF- 105
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK-FHPKENDFVSI 131
+GI Y H D +LH D+KP N+L++ ++DFGLA+ F +
Sbjct: 106 --LLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE 160
Query: 132 SATRGTIGYIAPELI--SRNFGTVSCKSDVYGFGMVLLEMTGG 172
T+ Y AP+++ S+ + T D++ G + EM G
Sbjct: 161 VV---TLWYRAPDVLMGSKKYSTT---IDIWSVGCIFAEMVNG 197
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 18/164 (10%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
I E+S + + H N+V+L + LV+E + + L + + E +S + +
Sbjct: 48 IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSF- 105
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFH--PKENDFVS 130
+GI Y H D +LH D+KP N+L++ ++DFGLA+ P
Sbjct: 106 --LLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE 160
Query: 131 ISATRGTIGYIAPELI--SRNFGTVSCKSDVYGFGMVLLEMTGG 172
I T+ Y AP+++ S+ + T D++ G + EM G
Sbjct: 161 IV----TLWYRAPDVLMGSKKYSTT---IDIWSVGCIFAEMVNG 197
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 9/131 (6%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS-ISATRGTIG 139
G++Y+H+ +LH D+KP N+LL+ + DFGLA+ ++D ++ T
Sbjct: 138 GLKYIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 140 YIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRR----NSNLKATRSSKAYFPSWVSDQ 195
Y APE++ + G D++ G +L EM R L S +
Sbjct: 195 YRAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 253
Query: 196 LNKGGNLELRN 206
LN G NL+ RN
Sbjct: 254 LNCGINLKARN 264
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 16/107 (14%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLA----KFHPKENDFVSISATRG 136
G++YLH+ + H DIK N+LL ++DFG+A K N FV G
Sbjct: 128 GLDYLHSERKI---HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV------G 178
Query: 137 TIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR-RNSNLKATR 182
T ++APE+I ++ K+D++ G+ +E+ G NS+L R
Sbjct: 179 TPFWMAPEVIKQS--AYDFKADIWSLGITAIELAKGEPPNSDLHPMR 223
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 97/229 (42%), Gaps = 33/229 (14%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG 63
S + +E ++E + + + +V +LLG C + + L+ + MP G L ++ +E +
Sbjct: 60 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV--REHKD 116
Query: 64 QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHP 123
S + L A G+ YL D ++H D+ N+L+ ++DFG AK
Sbjct: 117 NIGS-QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLG 172
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKATRS 183
E + I ++A E I T +SDV+ +G+ + E+ T
Sbjct: 173 AEEKEYHAEGGKVPIKWMALESILHRIYT--HQSDVWSYGVTVWELM----------TFG 220
Query: 184 SKAY--FP-SWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVK 229
SK Y P S +S L KG E + +C I ++ I VK
Sbjct: 221 SKPYDGIPASEISSILEKG-----------ERLPQPPICTIDVYMIMVK 258
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVS-ISATRGTIG 139
G++Y+H+ +LH D+KP N+LL+ + DFGLA+ ++D ++ T
Sbjct: 138 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 140 YIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
Y APE++ + G D++ G +L EM R
Sbjct: 195 YRAPEIMLNSKGYTK-SIDIWSVGCILAEMLSNR 227
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 24/163 (14%)
Query: 24 HVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIE 83
H NV++L+ F E + LV+E M GS+ HI + + + + +VAS ++
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVAS----ALD 125
Query: 84 YLHNGCDVCILHLDIKPHNILLDHNFVPN------VSDFGLAKFHPKENDFVSISATR-- 135
+LHN I H D+KP NIL +H PN + DFGL D IS
Sbjct: 126 FLHNK---GIAHRDLKPENILCEH---PNQVSPVKICDFGLGSGIKLNGDCSPISTPELL 179
Query: 136 ---GTIGYIAPELI---SRNFGTVSCKSDVYGFGMVLLEMTGG 172
G+ Y+APE++ S + D++ G++L + G
Sbjct: 180 TPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 97/229 (42%), Gaps = 33/229 (14%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG 63
S + +E ++E + + + +V +LLG C + + L+ + MP G L ++ +E +
Sbjct: 58 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV--REHKD 114
Query: 64 QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHP 123
S + L A G+ YL D ++H D+ N+L+ ++DFG AK
Sbjct: 115 NIGS-QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLG 170
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKATRS 183
E + I ++A E I T +SDV+ +G+ + E+ T
Sbjct: 171 AEEKEYHAEGGKVPIKWMALESILHRIYT--HQSDVWSYGVTVWELM----------TFG 218
Query: 184 SKAY--FP-SWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVK 229
SK Y P S +S L KG E + +C I ++ I VK
Sbjct: 219 SKPYDGIPASEISSILEKG-----------ERLPQPPICTIDVYMIMVK 256
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 15/143 (10%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
+ E + +++H N+V+L E + R L+ EF P GSL + + S +
Sbjct: 55 MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSL-YTVLEEPSNAYGLPESE 113
Query: 71 LHEVASGTAHGIEYL-HNGCDVCILHLDIKPHNILL----DHNFVPNVSDFGLAKFHPKE 125
V G+ +L NG I+H +IKP NI+ D V ++DFG A+ +
Sbjct: 114 FLIVLRDVVGGMNHLRENG----IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169
Query: 126 NDFVSISATRGTIGYIAPELISR 148
FVS+ GT Y+ P++ R
Sbjct: 170 EQFVSLY---GTEEYLHPDMYER 189
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 97/229 (42%), Gaps = 33/229 (14%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG 63
S + +E ++E + + + +V +LLG C + + L+ + MP G L ++ +E +
Sbjct: 63 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV--REHKD 119
Query: 64 QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHP 123
S + L A G+ YL D ++H D+ N+L+ ++DFG AK
Sbjct: 120 NIGS-QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLG 175
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKATRS 183
E + I ++A E I T +SDV+ +G+ + E+ T
Sbjct: 176 AEEKEYHAEGGKVPIKWMALESILHRIYT--HQSDVWSYGVTVWELM----------TFG 223
Query: 184 SKAY--FP-SWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVK 229
SK Y P S +S L KG E + +C I ++ I VK
Sbjct: 224 SKPYDGIPASEISSILEKG-----------ERLPQPPICTIDVYMIMVK 261
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 97/229 (42%), Gaps = 33/229 (14%)
Query: 4 NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRG 63
S + +E ++E + + + +V +LLG C + + L+ + MP G L ++ +E +
Sbjct: 56 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV--REHKD 112
Query: 64 QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHP 123
S + L A G+ YL D ++H D+ N+L+ ++DFG AK
Sbjct: 113 NIGS-QYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLG 168
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRRNSNLKATRS 183
E + I ++A E I T +SDV+ +G+ + E+ T
Sbjct: 169 AEEKEYHAEGGKVPIKWMALESILHRIYT--HQSDVWSYGVTVWELM----------TFG 216
Query: 184 SKAY--FP-SWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVK 229
SK Y P S +S L KG E + +C I ++ I VK
Sbjct: 217 SKPYDGIPASEISSILEKG-----------ERLPQPPICTIDVYMIMVK 254
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 16/164 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E++ G + H+ R +
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFAEP 141
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK +
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT Y+APE+I S+ + D + G+++ EM G
Sbjct: 199 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 13/155 (8%)
Query: 19 IGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE-KLHEVASG 77
+ + H +V L K V +++ G L H+ + + C E + A+
Sbjct: 93 LKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHL-----QRERCFLEPRARFYAAE 147
Query: 78 TAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGT 137
A + YLH+ + I++ D+KP NILLD ++DFGL K + + N + S GT
Sbjct: 148 IASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNS--TTSTFCGT 202
Query: 138 IGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
Y+APE++ + D + G VL EM G
Sbjct: 203 PEYLAPEVLHKQ--PYDRTVDWWCLGAVLYEMLYG 235
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 16/164 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E++ G + H+ R S
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEP 141
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+++D V+DFG AK +
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 130 SISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT Y+APE +IS+ + D + G+++ EM G
Sbjct: 199 C-----GTPEYLAPEIIISKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 67/148 (45%), Gaps = 16/148 (10%)
Query: 23 HHVNVVQLLGFCSEGSKRAL-VYEFMPNGSLDRHIFPKESRG-QSCSWEKLHEVASGTAH 80
H V +V + G K L V E + G L I + RG Q+ + + E+
Sbjct: 116 HIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRI---QDRGDQAFTEREASEIXKSIGE 172
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDH---NFVPNVSDFGLAKFHPKENDFVSISATRGT 137
I+YLH+ + I H D+KP N+L N + ++DFG AK N S++ T
Sbjct: 173 AIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYT 226
Query: 138 IGYIAPELISRNFGTVSCKSDVYGFGMV 165
Y+APE++ SC D + G++
Sbjct: 227 PYYVAPEVLGPEKYDKSC--DXWSLGVI 252
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 16/164 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E++ G + H+ R S
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEP 141
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK +
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT Y+APE+I S+ + D + G+++ +M G
Sbjct: 199 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYQMAAG 234
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 15/134 (11%)
Query: 42 LVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEV--ASGTAHGIEYLHNGCDVCILHLDIK 99
V E++ G L HI Q +++ V A+ + G+ +LH I++ D+K
Sbjct: 97 FVMEYVNGGDLMYHI------QQVGKFKEPQAVFYAAEISIGLFFLHKRG---IIYRDLK 147
Query: 100 PHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDV 159
N++LD ++DFG+ K H D V+ GT YIAPE+I+ + D
Sbjct: 148 LDNVMLDSEGHIKIADFGMCKEH--MMDGVTTREFCGTPDYIAPEIIA--YQPYGKSVDW 203
Query: 160 YGFGMVLLEMTGGR 173
+ +G++L EM G+
Sbjct: 204 WAYGVLLYEMLAGQ 217
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 11/148 (7%)
Query: 27 VVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLH 86
VVQL + +V E+MP G L + + W + + TA + L
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDL---VNLMSNYDVPEKWARFY-----TAEVVLALD 187
Query: 87 NGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI 146
+ +H D+KP N+LLD + ++DFG KE V GT YI+PE++
Sbjct: 188 AIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG-MVRCDTAVGTPDYISPEVL 246
Query: 147 SRNFGT--VSCKSDVYGFGMVLLEMTGG 172
G + D + G+ L EM G
Sbjct: 247 KSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 11/148 (7%)
Query: 27 VVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLH 86
VVQL + +V E+MP G L + + W + + TA + L
Sbjct: 131 VVQLFYAFQDDRYLYMVMEYMPGGDL---VNLMSNYDVPEKWARFY-----TAEVVLALD 182
Query: 87 NGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI 146
+ +H D+KP N+LLD + ++DFG KE V GT YI+PE++
Sbjct: 183 AIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG-MVRCDTAVGTPDYISPEVL 241
Query: 147 SRNFGT--VSCKSDVYGFGMVLLEMTGG 172
G + D + G+ L EM G
Sbjct: 242 KSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 15/101 (14%)
Query: 79 AHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKEND----------F 128
A +E+LH+ ++H D+KP NI + V V DFGL ++ + +
Sbjct: 174 AEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAY 230
Query: 129 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
+ GT Y++PE I N S K D++ G++L E+
Sbjct: 231 ATHXGQVGTKLYMSPEQIHGN--NYSHKVDIFSLGLILFEL 269
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 11/148 (7%)
Query: 27 VVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLH 86
VVQL + +V E+MP G L + + W + + TA + L
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDL---VNLMSNYDVPEKWARFY-----TAEVVLALD 187
Query: 87 NGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI 146
+ +H D+KP N+LLD + ++DFG KE V GT YI+PE++
Sbjct: 188 AIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG-MVRCDTAVGTPDYISPEVL 246
Query: 147 SRNFGT--VSCKSDVYGFGMVLLEMTGG 172
G + D + G+ L EM G
Sbjct: 247 KSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 85/203 (41%), Gaps = 35/203 (17%)
Query: 1 MLENSKFSA---EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIF 57
++ K SA ++ E + H N+V+L SE L+++ + G L I
Sbjct: 54 IINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIV 113
Query: 58 PKESRGQSCSWEKLHEVASGTAHGIEYLHNGC-DVCILHLDIKPHNILLDHNF---VPNV 113
+E ++ + + ++ H C + ++H D+KP N+LL +
Sbjct: 114 AREYYSEADASHCIQQILEAVLH--------CHQMGVVHRDLKPENLLLASKLKGAAVKL 165
Query: 114 SDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN-FGTVSCKSDVYGFGMVLLEMTGG 172
+DFGLA E + + GT GY++PE++ ++ +G D++ G++L + G
Sbjct: 166 ADFGLAI--EVEGEQQAWFGFAGTPGYLSPEVLRKDPYGK---PVDLWACGVILYILLVG 220
Query: 173 RRNSNLKATRSSKAYFPSWVSDQ 195
Y P W DQ
Sbjct: 221 --------------YPPFWDEDQ 229
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 16/164 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ + +L + S +V E+ P G + H+ R
Sbjct: 87 EHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFXEP 142
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+++D V+DFG AK +
Sbjct: 143 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL 199
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT Y+APE+I S+ + D + G+++ EM G
Sbjct: 200 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 235
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 77/182 (42%), Gaps = 38/182 (20%)
Query: 22 IHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHG 81
+ H N+V+L SE LV++ + G L I +E + + +H
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSE-----------ADASHC 108
Query: 82 IEYLHNGCDVC----ILHLDIKPHNILL---DHNFVPNVSDFGLAKFHPKENDFVSISAT 134
I+ + + C I+H D+KP N+LL ++DFGLA + D +
Sbjct: 109 IQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAI--EVQGDQQAWFGF 166
Query: 135 RGTIGYIAPELISRN-FGTVSCKSDVYGFGMVLLEMTGGRRNSNLKATRSSKAYFPSWVS 193
GT GY++PE++ ++ +G D++ G++L + G Y P W
Sbjct: 167 AGTPGYLSPEVLRKDPYGK---PVDMWACGVILYILLVG--------------YPPFWDE 209
Query: 194 DQ 195
DQ
Sbjct: 210 DQ 211
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 20/163 (12%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
E++ + + V + G + +K ++ E++ GS + P ++
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-----GPLDETQIAT 108
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLA----KFHPKENDFV 129
+ G++YLH+ + H DIK N+LL + ++DFG+A K N FV
Sbjct: 109 ILREILKGLDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV 165
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT ++APE+I ++ K+D++ G+ +E+ G
Sbjct: 166 ------GTPFWMAPEVIKQS--AYDSKADIWSLGITAIELARG 200
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 85/206 (41%), Gaps = 41/206 (19%)
Query: 1 MLENSKFSA---EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIF 57
++ K SA ++ E + H N+V+L SE LV++ + G L I
Sbjct: 36 IINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIV 95
Query: 58 PKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVC----ILHLDIKPHNILL---DHNFV 110
+E + + +H I+ + + C I+H D+KP N+LL
Sbjct: 96 AREYYSE-----------ADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAA 144
Query: 111 PNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN-FGTVSCKSDVYGFGMVLLEM 169
++DFGLA + D + GT GY++PE++ ++ +G D++ G++L +
Sbjct: 145 VKLADFGLAI--EVQGDQQAWFGFAGTPGYLSPEVLRKDPYGK---PVDMWACGVILYIL 199
Query: 170 TGGRRNSNLKATRSSKAYFPSWVSDQ 195
G Y P W DQ
Sbjct: 200 LVG--------------YPPFWDEDQ 211
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 20/163 (12%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
E++ + + V + G + +K ++ E++ GS + P ++
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-----GPLDETQIAT 108
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLA----KFHPKENDFV 129
+ G++YLH+ + H DIK N+LL + ++DFG+A K N FV
Sbjct: 109 ILREILKGLDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV 165
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT ++APE+I ++ K+D++ G+ +E+ G
Sbjct: 166 ------GTPFWMAPEVIKQS--AYDSKADIWSLGITAIELARG 200
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 9/161 (5%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
I E+S + ++H N+V+LL +K LV+E + D F S +
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQ---DLKTFMDASALTGIPLPLIK 105
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSIS 132
G+ + H+ +LH D+KP N+L++ ++DFGLA+ + +
Sbjct: 106 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYT 160
Query: 133 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
T+ Y APE++ S D++ G + EM R
Sbjct: 161 HEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 16/164 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E++ G + H+ R
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFXEP 141
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK +
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT Y+APE+I S+ + D + G+++ EM G
Sbjct: 199 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 84/202 (41%), Gaps = 33/202 (16%)
Query: 1 MLENSKFSA---EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIF 57
++ K SA ++ E + H N+V+L SE LV++ + G L I
Sbjct: 36 IINTKKLSARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIV 95
Query: 58 PKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHN---FVPNVS 114
+E ++ + + ++ H + + ++H D+KP N+LL ++
Sbjct: 96 AREYYSEADASHCIQQILEAVLHCHQ-------MGVVHRDLKPENLLLASKCKGAAVKLA 148
Query: 115 DFGLAKFHPKENDFVSISATRGTIGYIAPELISRN-FGTVSCKSDVYGFGMVLLEMTGGR 173
DFGLA + D + GT GY++PE++ + +G D++ G++L + G
Sbjct: 149 DFGLAI--EVQGDQQAWFGFAGTPGYLSPEVLRKEAYGK---PVDIWACGVILYILLVG- 202
Query: 174 RNSNLKATRSSKAYFPSWVSDQ 195
Y P W DQ
Sbjct: 203 -------------YPPFWDEDQ 211
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 16/164 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E++ G + H+ R
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFXEP 141
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK +
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT Y+APE+I S+ + D + G+++ EM G
Sbjct: 199 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 16/164 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E++ G + H+ R
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFXEP 141
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK +
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT Y+APE+I S+ + D + G+++ EM G
Sbjct: 199 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 88/210 (41%), Gaps = 27/210 (12%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E++ G + H+ R
Sbjct: 107 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFXEP 162
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK +
Sbjct: 163 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 219
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG-------RRNSNLKAT 181
GT Y+APE+I S+ + D + G+++ EM G + +
Sbjct: 220 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 271
Query: 182 RSSKAYFPSWVSDQLNKGGNLELRNVTEIE 211
S K FPS S L LRN+ +++
Sbjct: 272 VSGKVRFPSHFSSDLKD----LLRNLLQVD 297
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 16/164 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E++ G + H+ R
Sbjct: 81 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFXEP 136
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK +
Sbjct: 137 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 193
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT Y+APE+I S+ + D + G+++ EM G
Sbjct: 194 C-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 229
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 20/164 (12%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
E++ + + V + G + +K ++ E++ GS + P ++
Sbjct: 69 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIAT 123
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLA----KFHPKENDFV 129
+ G++YLH+ + H DIK N+LL + ++DFG+A K N FV
Sbjct: 124 ILREILKGLDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV 180
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
GT ++APE+I ++ K+D++ G+ +E+ G
Sbjct: 181 ------GTPFWMAPEVIKQS--AYDSKADIWSLGITAIELARGE 216
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 20/164 (12%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE 73
E++ + + V + G + +K ++ E++ GS + P ++
Sbjct: 74 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIAT 128
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLA----KFHPKENDFV 129
+ G++YLH+ + H DIK N+LL + ++DFG+A K N FV
Sbjct: 129 ILREILKGLDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV 185
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
GT ++APE+I ++ K+D++ G+ +E+ G
Sbjct: 186 ------GTPFWMAPEVIKQS--AYDSKADIWSLGITAIELARGE 221
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 95 HLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 154
H D+KP NIL+ + + DFG+A E + T GT+ Y APE S + T
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEK-LTQLGNTVGTLYYXAPERFSESHATY- 214
Query: 155 CKSDVYGFGMVLLE-MTG 171
++D+Y VL E +TG
Sbjct: 215 -RADIYALTCVLYECLTG 231
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 19/160 (11%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSL-DRHIFPKESRGQSCSWEKLH 72
E+ + +++H ++++ F + +V E M G L D+ + K + +C KL+
Sbjct: 64 TEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATC---KLY 119
Query: 73 EVASGTAHGIEYLH-NGCDVCILHLDIKPHNILL---DHNFVPNVSDFGLAKFHPKENDF 128
A ++YLH NG I+H D+KP N+LL + + + ++DFG +K + +
Sbjct: 120 FYQMLLA--VQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 173
Query: 129 VSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLL 167
++ GT Y+APE L+S + D + G++L
Sbjct: 174 RTLC---GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 19/160 (11%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSL-DRHIFPKESRGQSCSWEKLH 72
E+ + +++H ++++ F + +V E M G L D+ + K + +C KL+
Sbjct: 64 TEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATC---KLY 119
Query: 73 EVASGTAHGIEYLH-NGCDVCILHLDIKPHNILL---DHNFVPNVSDFGLAKFHPKENDF 128
A ++YLH NG I+H D+KP N+LL + + + ++DFG +K + +
Sbjct: 120 FYQMLLA--VQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 173
Query: 129 VSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLL 167
++ GT Y+APE L+S + D + G++L
Sbjct: 174 RTLC---GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 38 SKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLD 97
S+ V E++ G L H+ R + E ++ + + YLH + I++ D
Sbjct: 126 SRLFFVIEYVNGGDLMFHM----QRQRKLPEEHARFYSAEISLALNYLH---ERGIIYRD 178
Query: 98 IKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCK 156
+K N+LLD ++D+G+ K + D + S GT YIAPE++ ++G
Sbjct: 179 LKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSTFCGTPNYIAPEILRGEDYG---FS 233
Query: 157 SDVYGFGMVLLEMTGGR 173
D + G+++ EM GR
Sbjct: 234 VDWWALGVLMFEMMAGR 250
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 19/160 (11%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSL-DRHIFPKESRGQSCSWEKLH 72
E+ + +++H ++++ F + +V E M G L D+ + K + +C KL+
Sbjct: 64 TEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATC---KLY 119
Query: 73 EVASGTAHGIEYLH-NGCDVCILHLDIKPHNILL---DHNFVPNVSDFGLAKFHPKENDF 128
A ++YLH NG I+H D+KP N+LL + + + ++DFG +K + +
Sbjct: 120 FYQMLLA--VQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 173
Query: 129 VSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLL 167
++ GT Y+APE L+S + D + G++L
Sbjct: 174 RTLC---GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 19/160 (11%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSL-DRHIFPKESRGQSCSWEKLH 72
E+ + +++H ++++ F + +V E M G L D+ + K + +C KL+
Sbjct: 203 TEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATC---KLY 258
Query: 73 EVASGTAHGIEYLH-NGCDVCILHLDIKPHNILL---DHNFVPNVSDFGLAKFHPKENDF 128
A ++YLH NG I+H D+KP N+LL + + + ++DFG +K + +
Sbjct: 259 FYQMLLA--VQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 312
Query: 129 VSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLL 167
++ GT Y+APE L+S + D + G++L
Sbjct: 313 RTLC---GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 349
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 76/179 (42%), Gaps = 23/179 (12%)
Query: 8 SAEEFINEVSTIGRIH-HVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSC 66
S EV T+ + + N+++L+ F + ++ LV+E + GS+ HI + +
Sbjct: 53 SRSRVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHI----QKQKHF 108
Query: 67 SWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLD--HNFVP-NVSDFGLAKFHP 123
+ + V A +++LH I H D+KP NIL + P + DF L
Sbjct: 109 NEREASRVVRDVAAALDFLHTK---GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMK 165
Query: 124 KENDFVSISATR-----GTIGYIAPELI-----SRNFGTVSCKSDVYGFGMVLLEMTGG 172
N I+ G+ Y+APE++ F C D++ G+VL M G
Sbjct: 166 LNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRC--DLWSLGVVLYIMLSG 222
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 16/164 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E++ G + H+ R S
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEP 141
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK +
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT Y+AP +I S+ + D + G+++ EM G
Sbjct: 199 C-----GTPEYLAPAIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 19/160 (11%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSL-DRHIFPKESRGQSCSWEKLH 72
E+ + +++H ++++ F + +V E M G L D+ + K + +C KL+
Sbjct: 63 TEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATC---KLY 118
Query: 73 EVASGTAHGIEYLH-NGCDVCILHLDIKPHNILL---DHNFVPNVSDFGLAKFHPKENDF 128
A ++YLH NG I+H D+KP N+LL + + + ++DFG +K + +
Sbjct: 119 FYQMLLA--VQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 172
Query: 129 VSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLL 167
++ GT Y+APE L+S + D + G++L
Sbjct: 173 RTLC---GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 209
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 19/160 (11%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSL-DRHIFPKESRGQSCSWEKLH 72
E+ + +++H ++++ F + +V E M G L D+ + K + +C KL+
Sbjct: 70 TEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATC---KLY 125
Query: 73 EVASGTAHGIEYLH-NGCDVCILHLDIKPHNILL---DHNFVPNVSDFGLAKFHPKENDF 128
A ++YLH NG I+H D+KP N+LL + + + ++DFG +K + +
Sbjct: 126 FYQMLLA--VQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 179
Query: 129 VSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLL 167
++ GT Y+APE L+S + D + G++L
Sbjct: 180 RTLC---GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 216
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 83/184 (45%), Gaps = 27/184 (14%)
Query: 1 MLENSKFSAEEFINEVSTIGRIHHVNVVQLLGF-CSEGSKRA-----LVYEFMPNG--SL 52
+L++ +F E + + + H NVV L F S G K+ LV E++P
Sbjct: 72 VLQDKRFKNRE----LQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRA 127
Query: 53 DRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLD-HNFVP 111
RH + K + KL+ + Y+H+ + I H DIKP N+LLD + V
Sbjct: 128 SRH-YAKLKQTMPMLLIKLY--MYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVL 181
Query: 112 NVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEM 169
+ DFG AK VS +R Y APELI FG + + D++ G V+ E+
Sbjct: 182 KLIDFGSAKILIAGEPNVSXICSR---YYRAPELI---FGATNYTTNIDIWSTGCVMAEL 235
Query: 170 TGGR 173
G+
Sbjct: 236 MQGQ 239
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 38 SKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLD 97
S+ V E++ G L H+ R + E ++ + + YLH + I++ D
Sbjct: 94 SRLFFVIEYVNGGDLMFHM----QRQRKLPEEHARFYSAEISLALNYLH---ERGIIYRD 146
Query: 98 IKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCK 156
+K N+LLD ++D+G+ K + D + S GT YIAPE++ ++G
Sbjct: 147 LKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSXFCGTPNYIAPEILRGEDYG---FS 201
Query: 157 SDVYGFGMVLLEMTGGR 173
D + G+++ EM GR
Sbjct: 202 VDWWALGVLMFEMMAGR 218
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 19/160 (11%)
Query: 14 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSL-DRHIFPKESRGQSCSWEKLH 72
E+ + +++H ++++ F + +V E M G L D+ + K + +C KL+
Sbjct: 189 TEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATC---KLY 244
Query: 73 EVASGTAHGIEYLH-NGCDVCILHLDIKPHNILL---DHNFVPNVSDFGLAKFHPKENDF 128
A ++YLH NG I+H D+KP N+LL + + + ++DFG +K + +
Sbjct: 245 FYQMLLA--VQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 298
Query: 129 VSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLL 167
++ GT Y+APE L+S + D + G++L
Sbjct: 299 RTLC---GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 335
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 69/163 (42%), Gaps = 13/163 (7%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
I E+S + ++H N+V+LL +K LV+E + D F S +
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQ---DLKKFMDASALTGIPLPLIK 109
Query: 73 EVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFH--PKENDFVS 130
G+ + H+ +LH D+KP N+L++ ++DFGLA+ P
Sbjct: 110 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 166
Query: 131 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ T+ Y APE++ S D++ G + EM R
Sbjct: 167 VV----TLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 62 RGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF 121
+ Q+ S E + + G++Y+H+ I+H D+KP N+ ++ + + DFGLA+
Sbjct: 124 KSQALSDEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLAR- 179
Query: 122 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ + ATR Y APE++ N+ + D++ G ++ E+ G+
Sbjct: 180 -QADEEMTGYVATR---WYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 38 SKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLD 97
S+ V E++ G L H+ R + E ++ + + YLH + I++ D
Sbjct: 79 SRLFFVIEYVNGGDLMFHM----QRQRKLPEEHARFYSAEISLALNYLH---ERGIIYRD 131
Query: 98 IKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCK 156
+K N+LLD ++D+G+ K + D + S GT YIAPE++ ++G
Sbjct: 132 LKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSXFCGTPNYIAPEILRGEDYG---FS 186
Query: 157 SDVYGFGMVLLEMTGGR 173
D + G+++ EM GR
Sbjct: 187 VDWWALGVLMFEMMAGR 203
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 22/122 (18%)
Query: 93 ILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 152
++HLD+KP NI L + DFGL + + G Y+APEL+ ++GT
Sbjct: 178 LVHLDVKPANIFLGPRGRCKLGDFGLLV---ELGTAGAGEVQEGDPRYMAPELLQGSYGT 234
Query: 153 VSCKSDVYGFGMVLLEMT-------GGRRNSNLKATRSSKAYFPSWVSDQLNKGGNLELR 205
+DV+ G+ +LE+ GG L+ + Y P + G + ELR
Sbjct: 235 A---ADVFSLGLTILEVACNMELPHGGEGWQQLR-----QGYLPP----EFTAGLSSELR 282
Query: 206 NV 207
+V
Sbjct: 283 SV 284
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 11/164 (6%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E+ E++ + + +VV GF + +V E R + R ++ +
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEI----CRRRSLLELHKRRKAVTEP 142
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
+ T G++YLHN ++H D+K N+ L+ + + DFGLA E D
Sbjct: 143 EARYFMRQTIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGE 197
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
GT YIAPE++ + S + D++ G +L + G+
Sbjct: 198 RKKTLCGTPNYIAPEVLCKK--GHSFEVDIWSLGCILYTLLVGK 239
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 38 SKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLD 97
S+ V E++ G L H+ R + E ++ + + YLH + I++ D
Sbjct: 83 SRLFFVIEYVNGGDLMFHM----QRQRKLPEEHARFYSAEISLALNYLH---ERGIIYRD 135
Query: 98 IKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCK 156
+K N+LLD ++D+G+ K + D + S GT YIAPE++ ++G
Sbjct: 136 LKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSXFCGTPNYIAPEILRGEDYG---FS 190
Query: 157 SDVYGFGMVLLEMTGGR 173
D + G+++ EM GR
Sbjct: 191 VDWWALGVLMFEMMAGR 207
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 137 GLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARH--TDDEMTGYVATR---WY 188
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 189 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 166 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WY 217
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE++ N+ + D++ G ++ E+ GR
Sbjct: 218 RAPEIM-LNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 142 GLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARH--TDDEMTGYVATR---WY 193
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 194 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 78/171 (45%), Gaps = 26/171 (15%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRA--------LVYEFMPN--GSLDRHIFPKESR 62
+ E+ + + H NVV L+ C + LV++F + L ++ K
Sbjct: 64 LREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK--- 120
Query: 63 GQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK-F 121
+ ++ V +G+ Y+H ILH D+K N+L+ + V ++DFGLA+ F
Sbjct: 121 ---FTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAF 174
Query: 122 HPKENDFVSISATR-GTIGYIAPELI--SRNFGTVSCKSDVYGFGMVLLEM 169
+N + R T+ Y PEL+ R++G D++G G ++ EM
Sbjct: 175 SLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGP---PIDLWGAGCIMAEM 222
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 11/164 (6%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E+ E++ + + +VV GF + +V E R + R ++ +
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEI----CRRRSLLELHKRRKAVTEP 142
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
+ T G++YLHN ++H D+K N+ L+ + + DFGLA E D
Sbjct: 143 EARYFMRQTIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGE 197
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
GT YIAPE++ + S + D++ G +L + G+
Sbjct: 198 RKKXLCGTPNYIAPEVLCKK--GHSFEVDIWSLGCILYTLLVGK 239
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 148 GLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARH--TDDEMTGYVATR---WY 199
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 200 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 78/171 (45%), Gaps = 26/171 (15%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRA--------LVYEFMPN--GSLDRHIFPKESR 62
+ E+ + + H NVV L+ C + LV++F + L ++ K
Sbjct: 65 LREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK--- 121
Query: 63 GQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK-F 121
+ ++ V +G+ Y+H ILH D+K N+L+ + V ++DFGLA+ F
Sbjct: 122 ---FTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAF 175
Query: 122 HPKENDFVSISATR-GTIGYIAPELI--SRNFGTVSCKSDVYGFGMVLLEM 169
+N + R T+ Y PEL+ R++G D++G G ++ EM
Sbjct: 176 SLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGP---PIDLWGAGCIMAEM 223
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 142 GLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARH--TDDEMTGYVATR---WY 193
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 194 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 71/164 (43%), Gaps = 11/164 (6%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E+ E++ + + +VV GF + +V E SL R ++ +
Sbjct: 71 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL----LELHKRRKAVTEP 126
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
+ T G++YLHN ++H D+K N+ L+ + + DFGLA E D
Sbjct: 127 EARYFMRQTIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGE 181
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
GT YIAPE++ + S + D++ G +L + G+
Sbjct: 182 RKKDLCGTPNYIAPEVLCKK--GHSFEVDIWSLGCILYTLLVGK 223
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 74/163 (45%), Gaps = 24/163 (14%)
Query: 24 HVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIE 83
H NV++L+ F E + LV+E M GS+ HI + + + + +VAS ++
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVAS----ALD 125
Query: 84 YLHNGCDVCILHLDIKPHNILLDHNFVPN------VSDFGLAKFHPKENDFVSISATR-- 135
+LHN I H D+KP NIL +H PN + DF L D IS
Sbjct: 126 FLHNK---GIAHRDLKPENILCEH---PNQVSPVKICDFDLGSGIKLNGDCSPISTPELL 179
Query: 136 ---GTIGYIAPELI---SRNFGTVSCKSDVYGFGMVLLEMTGG 172
G+ Y+APE++ S + D++ G++L + G
Sbjct: 180 TPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 78/171 (45%), Gaps = 26/171 (15%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRA--------LVYEFMPN--GSLDRHIFPKESR 62
+ E+ + + H NVV L+ C + LV++F + L ++ K
Sbjct: 65 LREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK--- 121
Query: 63 GQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK-F 121
+ ++ V +G+ Y+H ILH D+K N+L+ + V ++DFGLA+ F
Sbjct: 122 ---FTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAF 175
Query: 122 HPKENDFVSISATR-GTIGYIAPELI--SRNFGTVSCKSDVYGFGMVLLEM 169
+N + R T+ Y PEL+ R++G D++G G ++ EM
Sbjct: 176 SLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGP---PIDLWGAGCIMAEM 223
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 78/171 (45%), Gaps = 26/171 (15%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRA--------LVYEFMPN--GSLDRHIFPKESR 62
+ E+ + + H NVV L+ C + LV++F + L ++ K
Sbjct: 65 LREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK--- 121
Query: 63 GQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK-F 121
+ ++ V +G+ Y+H ILH D+K N+L+ + V ++DFGLA+ F
Sbjct: 122 ---FTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAF 175
Query: 122 HPKENDFVSISATR-GTIGYIAPELI--SRNFGTVSCKSDVYGFGMVLLEM 169
+N + R T+ Y PEL+ R++G D++G G ++ EM
Sbjct: 176 SLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGP---PIDLWGAGCIMAEM 223
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 77/179 (43%), Gaps = 32/179 (17%)
Query: 22 IHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHG 81
+ H N+V+L SE L+++ + G L I +E ++ + + ++ H
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLH- 125
Query: 82 IEYLHNGC-DVCILHLDIKPHNILLDHNF---VPNVSDFGLAKFHPKENDFVSISATRGT 137
C + ++H ++KP N+LL ++DFGLA E + + GT
Sbjct: 126 -------CHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAI--EVEGEQQAWFGFAGT 176
Query: 138 IGYIAPELISRN-FGTVSCKSDVYGFGMVLLEMTGGRRNSNLKATRSSKAYFPSWVSDQ 195
GY++PE++ ++ +G D++ G++L + G Y P W DQ
Sbjct: 177 PGYLSPEVLRKDPYGK---PVDLWACGVILYILLVG--------------YPPFWDEDQ 218
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 137 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMAGFVATR---WY 188
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 189 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 137 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMAGFVATR---WY 188
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 189 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 64 QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHP 123
Q+ S E + + G++Y+H+ I+H D+KP N+ ++ + + DFGLA+
Sbjct: 126 QALSDEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLAR--Q 180
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ + ATR Y APE++ N+ + D++ G ++ E+ G+
Sbjct: 181 ADEEMTGYVATR---WYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 11/164 (6%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E+ E++ + + +VV GF + +V E R + R ++ +
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEI----CRRRSLLELHKRRKAVTEP 142
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
+ T G++YLHN ++H D+K N+ L+ + + DFGLA E D
Sbjct: 143 EARYFMRQTIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGE 197
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
GT YIAPE++ + S + D++ G +L + G+
Sbjct: 198 RKKDLCGTPNYIAPEVLCKK--GHSFEVDIWSLGCILYTLLVGK 239
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 143 GLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLARH--TDDEMTGYVATR---WY 194
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 195 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 139 GLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLARH--TDDEMTGYVATR---WY 190
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 191 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Query: 64 QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHP 123
Q+ S E + + G++Y+H+ I+H D+KP N+ ++ + + DFGLA+
Sbjct: 118 QALSDEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLAR--Q 172
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
+ + ATR Y APE I N+ + D++ G ++ E+ G+
Sbjct: 173 ADEEMTGYVATR---WYRAPE-IMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 16/164 (9%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E +NE + ++ +V+L + S +V E++ G + H+ R S
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEP 141
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
A+ EYLH+ + +++ D+KP N+L+D V+DFG AK +
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 130 SISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMTGG 172
GT +APE+I S+ + D + G+++ EM G
Sbjct: 199 C-----GTPEALAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 93 ILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 152
++H D+KP NILLD + DFG++ + D + + G Y+APE I T
Sbjct: 146 VIHRDVKPSNILLDERGQIKLCDFGISG---RLVDDKAKDRSAGCAAYMAPERIDPPDPT 202
Query: 153 ---VSCKSDVYGFGMVLLEMTGGR 173
++DV+ G+ L+E+ G+
Sbjct: 203 KPDYDIRADVWSLGISLVELATGQ 226
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 133 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMAGFVATR---WY 184
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 185 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 137 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WY 188
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 189 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 144 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WY 195
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 196 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 137 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WY 188
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 189 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 137 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WY 188
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 189 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 143 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WY 194
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 195 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 137 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WY 188
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 189 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 147 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WY 198
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 199 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 82/177 (46%), Gaps = 20/177 (11%)
Query: 8 SAEEFINEVSTIGRI--HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQS 65
+ + + NE++ + ++ H +++L + +Y M G++D + + K+ +
Sbjct: 53 TLDSYRNEIAYLNKLQQHSDKIIRLYDY---EITDQYIYMVMECGNIDLNSWLKKKKSID 109
Query: 66 CSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKE 125
WE+ S + +E +H I+H D+KP N L+ + + DFG+A +
Sbjct: 110 -PWER----KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPD 163
Query: 126 NDFVSISATRGTIGYIAPELI-----SRNFG----TVSCKSDVYGFGMVLLEMTGGR 173
V + GT+ Y+ PE I SR G +S KSDV+ G +L MT G+
Sbjct: 164 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 220
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 82/177 (46%), Gaps = 20/177 (11%)
Query: 8 SAEEFINEVSTIGRI--HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQS 65
+ + + NE++ + ++ H +++L + +Y M G++D + + K+ +
Sbjct: 69 TLDSYRNEIAYLNKLQQHSDKIIRLYDY---EITDQYIYMVMECGNIDLNSWLKKKKSID 125
Query: 66 CSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKE 125
WE+ S + +E +H I+H D+KP N L+ + + DFG+A +
Sbjct: 126 -PWER----KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPD 179
Query: 126 NDFVSISATRGTIGYIAPELI-----SRNFG----TVSCKSDVYGFGMVLLEMTGGR 173
V + GT+ Y+ PE I SR G +S KSDV+ G +L MT G+
Sbjct: 180 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 149 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WY 200
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 201 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 149 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WY 200
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 201 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 142 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WY 193
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 194 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 148 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WY 199
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 200 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 149 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WY 200
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 201 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 136 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WY 187
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 188 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 137 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WY 188
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 189 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 137 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WY 188
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 189 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 137 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WY 188
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 189 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 143 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WY 194
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 195 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 13/102 (12%)
Query: 74 VASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISA 133
+A + H + Y+H DIKP NIL+D N ++DFG + E+ V S
Sbjct: 186 IAIDSVHQLHYVHR---------DIKPDNILMDMNGHIRLADFG-SCLKLMEDGTVQSSV 235
Query: 134 TRGTIGYIAPELISR---NFGTVSCKSDVYGFGMVLLEMTGG 172
GT YI+PE++ G + D + G+ + EM G
Sbjct: 236 AVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYG 277
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 139 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WY 190
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 191 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 143 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WY 194
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 195 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 139 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WY 190
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 191 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 78/171 (45%), Gaps = 37/171 (21%)
Query: 24 HVNVVQLLGFCSEGSKRALVYEF-MPNGSLDRHIFPKESRGQSCSWEK-------LHEVA 75
H NV++ +CSE + R L + N +L + K ++ +K L ++A
Sbjct: 68 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 125
Query: 76 SGTAHGIEYLHNGCDVCILHLDIKPHNILLD-------------HNFVPNVSDFGL-AKF 121
SG AH LH+ + I+H D+KP NIL+ N +SDFGL K
Sbjct: 126 SGVAH----LHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 178
Query: 122 HPKENDF-VSISATRGTIGYIAPELI--SRNFGT---VSCKSDVYGFGMVL 166
++ F +++ GT G+ APEL+ S N T ++ D++ G V
Sbjct: 179 DSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVF 229
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 137 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WY 188
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 189 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 157 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WY 208
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 209 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 160 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WY 211
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 212 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 137 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WY 188
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 189 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 20/182 (10%)
Query: 3 ENSKFSAEEFINEVSTIGRI--HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKE 60
E + + + NE++ + ++ H +++L + +Y M G++D + + K+
Sbjct: 44 EADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY---EITDQYIYMVMECGNIDLNSWLKK 100
Query: 61 SRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK 120
+ WE+ S + +E +H I+H D+KP N L+ + + DFG+A
Sbjct: 101 KKSID-PWER----KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIAN 154
Query: 121 FHPKENDFVSISATRGTIGYIAPELI-----SRNFG----TVSCKSDVYGFGMVLLEMTG 171
+ V + GT+ Y+ PE I SR G +S KSDV+ G +L MT
Sbjct: 155 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 214
Query: 172 GR 173
G+
Sbjct: 215 GK 216
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 137 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGXVATR---WY 188
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 189 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 82/177 (46%), Gaps = 20/177 (11%)
Query: 8 SAEEFINEVSTIGRI--HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQS 65
+ + + NE++ + ++ H +++L + +Y M G++D + + K+ +
Sbjct: 69 TLDSYRNEIAYLNKLQQHSDKIIRLYDY---EITDQYIYMVMECGNIDLNSWLKKKKSID 125
Query: 66 CSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKE 125
WE+ S + +E +H I+H D+KP N L+ + + DFG+A +
Sbjct: 126 -PWER----KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPD 179
Query: 126 NDFVSISATRGTIGYIAPELI-----SRNFG----TVSCKSDVYGFGMVLLEMTGGR 173
V + GT+ Y+ PE I SR G +S KSDV+ G +L MT G+
Sbjct: 180 XXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 156 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WY 207
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 208 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 134 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WY 185
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 186 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 157 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WY 208
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 209 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 139 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WY 190
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 191 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 133 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WY 184
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 185 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 133 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WY 184
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 185 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 134 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WY 185
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 186 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 133 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WY 184
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 185 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 142 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WY 193
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 194 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 20/182 (10%)
Query: 3 ENSKFSAEEFINEVSTIGRI--HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKE 60
E + + + NE++ + ++ H +++L + +Y M G++D + + K+
Sbjct: 92 EADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY---EITDQYIYMVMECGNIDLNSWLKK 148
Query: 61 SRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK 120
+ WE+ S + +E +H I+H D+KP N L+ + + DFG+A
Sbjct: 149 KKSID-PWER----KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIAN 202
Query: 121 FHPKENDFVSISATRGTIGYIAPELI-----SRNFG----TVSCKSDVYGFGMVLLEMTG 171
+ V + GT+ Y+ PE I SR G +S KSDV+ G +L MT
Sbjct: 203 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 262
Query: 172 GR 173
G+
Sbjct: 263 GK 264
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 73/170 (42%), Gaps = 26/170 (15%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
+ E+ + + H N+V+L K LV+EF + L ++ SC+ +
Sbjct: 49 LREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC-DQDLKKYF-------DSCNGDLDP 100
Query: 73 EVASGTAHGIEYLHNGCDVC----ILHLDIKPHNILLDHNFVPNVSDFGLAKFH--PKEN 126
E+ + L G C +LH D+KP N+L++ N ++DFGLA+ P
Sbjct: 101 EIVKSF---LFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVR- 156
Query: 127 DFVSISATRGTIGYIAPELISRNFGT--VSCKSDVYGFGMVLLEMTGGRR 174
SA T+ Y P+++ FG S D++ G + E+ R
Sbjct: 157 ---CYSAEVVTLWYRPPDVL---FGAKLYSTSIDMWSAGCIFAELANAAR 200
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 135 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WY 186
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 187 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 156 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WY 207
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 208 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 82/177 (46%), Gaps = 20/177 (11%)
Query: 8 SAEEFINEVSTIGRI--HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQS 65
+ + + NE++ + ++ H +++L + +Y M G++D + + K+ +
Sbjct: 50 TLDSYRNEIAYLNKLQQHSDKIIRLYDY---EITDQYIYMVMECGNIDLNSWLKKKKSID 106
Query: 66 CSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKE 125
WE+ S + +E +H I+H D+KP N L+ + + DFG+A +
Sbjct: 107 -PWER----KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPD 160
Query: 126 NDFVSISATRGTIGYIAPELI-----SRNFG----TVSCKSDVYGFGMVLLEMTGGR 173
V + GT+ Y+ PE I SR G +S KSDV+ G +L MT G+
Sbjct: 161 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 217
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 33/167 (19%)
Query: 24 HVNVVQLLGFCSEGSKRALVYEF-MPNGSLDRHIFPKESRGQSCSWEK-------LHEVA 75
H NV++ +CSE + R L + N +L + K ++ +K L ++A
Sbjct: 86 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 143
Query: 76 SGTAHGIEYLHNGCDVCILHLDIKPHNILLD-------------HNFVPNVSDFGL-AKF 121
SG AH LH+ + I+H D+KP NIL+ N +SDFGL K
Sbjct: 144 SGVAH----LHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 196
Query: 122 HPKENDF-VSISATRGTIGYIAPELISRNFGTVSCKS-DVYGFGMVL 166
+ F +++ GT G+ APEL+ + +S D++ G V
Sbjct: 197 DSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVF 243
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 33/167 (19%)
Query: 24 HVNVVQLLGFCSEGSKRALVYEF-MPNGSLDRHIFPKESRGQSCSWEK-------LHEVA 75
H NV++ +CSE + R L + N +L + K ++ +K L ++A
Sbjct: 86 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 143
Query: 76 SGTAHGIEYLHNGCDVCILHLDIKPHNILLD-------------HNFVPNVSDFGL-AKF 121
SG AH LH+ + I+H D+KP NIL+ N +SDFGL K
Sbjct: 144 SGVAH----LHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 196
Query: 122 HPKENDF-VSISATRGTIGYIAPELISRNFGTVSCKS-DVYGFGMVL 166
+ F +++ GT G+ APEL+ + +S D++ G V
Sbjct: 197 DSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVF 243
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 160 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMXGYVATR---WY 211
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 212 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 157 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMXGXVATR---WY 208
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 209 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ E ++ T Y
Sbjct: 144 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWY 195
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 196 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ E ++ T Y
Sbjct: 144 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWY 195
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 196 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 94 LHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS---RNF 150
+H DIKP N+LLD N ++DFG + ++ V S GT YI+PE++
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGM 255
Query: 151 GTVSCKSDVYGFGMVLLEMTGG 172
G + D + G+ + EM G
Sbjct: 256 GKYGPECDWWSLGVCMYEMLYG 277
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ E ++ T Y
Sbjct: 144 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWY 195
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 196 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 94 LHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS---RNF 150
+H DIKP N+LLD N ++DFG + ++ V S GT YI+PE++
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGM 271
Query: 151 GTVSCKSDVYGFGMVLLEMTGG 172
G + D + G+ + EM G
Sbjct: 272 GKYGPECDWWSLGVCMYEMLYG 293
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 20/175 (11%)
Query: 10 EEFINEVSTIGRI--HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
+ + NE++ + ++ H +++L + +Y M G++D + + K+ +
Sbjct: 99 DSYRNEIAYLNKLQQHSDKIIRLYDY---EITDQYIYMVMECGNIDLNSWLKKKKSID-P 154
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKEND 127
WE+ S + +E +H I+H D+KP N L+ + + DFG+A +
Sbjct: 155 WER----KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTT 209
Query: 128 FVSISATRGTIGYIAPELI-----SRNFG----TVSCKSDVYGFGMVLLEMTGGR 173
V + GT+ Y+ PE I SR G +S KSDV+ G +L MT G+
Sbjct: 210 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 73/175 (41%), Gaps = 14/175 (8%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E+ E+S + H +VV GF + +V E SL R ++ +
Sbjct: 60 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL----LELHKRRKALTEP 115
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
+ G +YLH ++H D+K N+ L+ + + DFGLA E D
Sbjct: 116 EARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGE 170
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR---RNSNLKAT 181
GT YIAPE++S+ S + DV+ G ++ + G+ S LK T
Sbjct: 171 RKKVLCGTPNYIAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET 223
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK---FHPKENDFVSISATRGT 137
G++Y+H+ ++H D+KP N+L++ N + DFG+A+ P E+ + ++ T
Sbjct: 171 GLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYF-MTEYVAT 226
Query: 138 IGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRR 174
Y APEL+ + + D++ G + EM R+
Sbjct: 227 RWYRAPELML-SLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK---FHPKENDFVSISATRGT 137
G++Y+H+ ++H D+KP N+L++ N + DFG+A+ P E+ + ++ T
Sbjct: 170 GLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYF-MTEYVAT 225
Query: 138 IGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGRR 174
Y APEL+ + + D++ G + EM R+
Sbjct: 226 RWYRAPELML-SLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + D+GLA+ +++ ATR Y
Sbjct: 137 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLARH--TDDEMTGYVATR---WY 188
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 189 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 37/171 (21%)
Query: 24 HVNVVQLLGFCSEGSKRALVYEF-MPNGSLDRHIFPKESRGQSCSWEK-------LHEVA 75
H NV++ +CSE + R L + N +L + K ++ +K L ++A
Sbjct: 68 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 125
Query: 76 SGTAHGIEYLHNGCDVCILHLDIKPHNILLD-------------HNFVPNVSDFGL-AKF 121
SG AH LH+ + I+H D+KP NIL+ N +SDFGL K
Sbjct: 126 SGVAH----LHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 178
Query: 122 HPKENDF-VSISATRGTIGYIAPELI--SRNFGT---VSCKSDVYGFGMVL 166
+ F +++ GT G+ APEL+ S N T ++ D++ G V
Sbjct: 179 DSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVF 229
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 85 LHNGCDVC----ILHLDIKPHNILLDHNFVP-NVSDFGLAKFHPKENDFVSISATRGTIG 139
L D C I+H D+KPHN+++DH + D+GLA+F+ ++ A+R G
Sbjct: 141 LLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKG 200
Query: 140 YIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
PEL+ ++ D++ G +L M R
Sbjct: 201 ---PELLV-DYQMYDYSLDMWSLGCMLASMIFRR 230
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 11/164 (6%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E+ E+S + H +VV GF + +V E R + R ++ +
Sbjct: 62 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLEL----CRRRSLLELHKRRKALTEP 117
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
+ G +YLH ++H D+K N+ L+ + + DFGLA E D
Sbjct: 118 EARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGE 172
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
GT YIAPE++S+ S + DV+ G ++ + G+
Sbjct: 173 RKKTLCGTPNYIAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGK 214
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 11/164 (6%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E+ E+S + H +VV GF + +V E R + R ++ +
Sbjct: 62 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLEL----CRRRSLLELHKRRKALTEP 117
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
+ G +YLH ++H D+K N+ L+ + + DFGLA E D
Sbjct: 118 EARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGE 172
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
GT YIAPE++S+ S + DV+ G ++ + G+
Sbjct: 173 RKKTLCGTPNYIAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGK 214
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 11/164 (6%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E+ E+S + H +VV GF + +V E R + R ++ +
Sbjct: 66 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLEL----CRRRSLLELHKRRKALTEP 121
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
+ G +YLH ++H D+K N+ L+ + + DFGLA E D
Sbjct: 122 EARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGE 176
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
GT YIAPE++S+ S + DV+ G ++ + G+
Sbjct: 177 RKKTLCGTPNYIAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGK 218
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 85 LHNGCDVC----ILHLDIKPHNILLDHNFVP-NVSDFGLAKFHPKENDFVSISATRGTIG 139
L D C I+H D+KPHN+++DH + D+GLA+F+ ++ A+R G
Sbjct: 146 LLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKG 205
Query: 140 YIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
PEL+ ++ D++ G +L M R
Sbjct: 206 ---PELLV-DYQMYDYSLDMWSLGCMLASMIFRR 235
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGLA+ +++ ATR Y
Sbjct: 137 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WY 188
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N + D++ G ++ E+ GR
Sbjct: 189 RAPE-IMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 11/164 (6%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E+ E+S + H +VV GF + +V E R + R ++ +
Sbjct: 86 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLEL----CRRRSLLELHKRRKALTEP 141
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
+ G +YLH ++H D+K N+ L+ + + DFGLA E D
Sbjct: 142 EARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGE 196
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
GT YIAPE++S+ S + DV+ G ++ + G+
Sbjct: 197 RKKVLCGTPNYIAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGK 238
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 11/164 (6%)
Query: 10 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWE 69
E+ E+S + H +VV GF + +V E R + R ++ +
Sbjct: 84 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLEL----CRRRSLLELHKRRKALTEP 139
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
+ G +YLH ++H D+K N+ L+ + + DFGLA E D
Sbjct: 140 EARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGE 194
Query: 130 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
GT YIAPE++S+ S + DV+ G ++ + G+
Sbjct: 195 RKKVLCGTPNYIAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGK 236
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 84/191 (43%), Gaps = 27/191 (14%)
Query: 9 AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSW 68
+E F S + ++ H ++V G C G + LV EF+ GSLD ++ K + W
Sbjct: 56 SESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYL-KKNKNCINILW 114
Query: 69 EKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILL---------DHNFVPNVSDFGLA 119
+ EVA A + +L ++H ++ NILL + F+ +SD G++
Sbjct: 115 KL--EVAKQLAWAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFI-KLSDPGIS 168
Query: 120 -KFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG--RRNS 176
PK+ + I ++ PE I N ++ +D + FG L E+ G + S
Sbjct: 169 ITVLPKD-------ILQERIPWVPPECIE-NPKNLNLATDKWSFGTTLWEICSGGDKPLS 220
Query: 177 NLKATRSSKAY 187
L + R + Y
Sbjct: 221 ALDSQRKLQFY 231
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 86/194 (44%), Gaps = 33/194 (17%)
Query: 9 AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSC-- 66
+E F S + ++ H ++V G C G + LV EF+ GSLD ++ + ++C
Sbjct: 56 SESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYL----KKNKNCIN 111
Query: 67 -SWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILL---------DHNFVPNVSDF 116
W+ EVA A + +L ++H ++ NILL + F+ +SD
Sbjct: 112 ILWKL--EVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFI-KLSDP 165
Query: 117 GLA-KFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG--R 173
G++ PK+ + I ++ PE I N ++ +D + FG L E+ G +
Sbjct: 166 GISITVLPKD-------ILQERIPWVPPECIE-NPKNLNLATDKWSFGTTLWEICSGGDK 217
Query: 174 RNSNLKATRSSKAY 187
S L + R + Y
Sbjct: 218 PLSALDSQRKLQFY 231
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 88 GCDVC----ILHLDIKPHNILLDHNFVP-NVSDFGLAKFHPKENDFVSISATRGTIGYIA 142
D C I+H D+KPHN+L+DH + D+GLA+F+ ++ A+R G
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG--- 199
Query: 143 PELISRNFGTVSCKSDVYGFGMVLLEM 169
PEL+ ++ D++ G +L M
Sbjct: 200 PELLV-DYQMYDYSLDMWSLGCMLASM 225
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DFGL + +++ ATR Y
Sbjct: 137 GLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLCRH--TDDEMTGYVATR---WY 188
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 189 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 14/128 (10%)
Query: 42 LVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPH 101
++ E M G L I +E Q+ + + E+ I++LH+ I H D+KP
Sbjct: 103 IIMECMEGGELFSRI--QERGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPE 157
Query: 102 NILL---DHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSD 158
N+L + + V ++DFG A KE ++ T Y+APE++ SC D
Sbjct: 158 NLLYTSKEKDAVLKLTDFGFA----KETTQNALQTPCYTPYYVAPEVLGPEKYDKSC--D 211
Query: 159 VYGFGMVL 166
++ G+++
Sbjct: 212 MWSLGVIM 219
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 95/239 (39%), Gaps = 34/239 (14%)
Query: 12 FINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKL 71
F EV + H NVV +G C A++ +L + K
Sbjct: 76 FKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVV---RDAKIVLDVNKT 132
Query: 72 HEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFH-----PKEN 126
++A G+ YLH ILH D+K N+ D+ V ++DFGL +
Sbjct: 133 RQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYDNGKV-VITDFGLFSISGVLQAGRRE 188
Query: 127 DFVSISATRGTIGYIAPELISR-------NFGTVSCKSDVYGFGMVLLEMTGGRRNSNLK 179
D + I G + ++APE+I + + S SDV+ G + E+ R K
Sbjct: 189 DKLRIQ--NGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHA--REWPFK 244
Query: 180 ATRSSKAYFPSWVSDQLNKGGNLELRNVTEIESMIARKLCVIGLWCIQVKPADRPSMTK 238
T+ ++A W Q+ G L + + +++ I L+C + +RP+ TK
Sbjct: 245 -TQPAEAII--W---QMGTGMKPNLSQIG-----MGKEISDILLFCWAFEQEERPTFTK 292
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 14/128 (10%)
Query: 42 LVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPH 101
++ E M G L I +E Q+ + + E+ I++LH+ I H D+KP
Sbjct: 84 IIMECMEGGELFSRI--QERGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPE 138
Query: 102 NILL---DHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSD 158
N+L + + V ++DFG A KE ++ T Y+APE++ SC D
Sbjct: 139 NLLYTSKEKDAVLKLTDFGFA----KETTQNALQTPCYTPYYVAPEVLGPEKYDKSC--D 192
Query: 159 VYGFGMVL 166
++ G+++
Sbjct: 193 MWSLGVIM 200
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 19/140 (13%)
Query: 15 EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGS-----LDRHIFPKESRGQSCSWE 69
E++ + R+ H N++++L LV E +G +DRH E
Sbjct: 79 EIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYI--- 135
Query: 70 KLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFV 129
++ S A G L + I+H DIK NI++ +F + DFG A + + F
Sbjct: 136 -FRQLVS--AVGYLRLKD-----IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFY 187
Query: 130 SISATRGTIGYIAPELISRN 149
+ GTI Y APE++ N
Sbjct: 188 TFC---GTIEYCAPEVLMGN 204
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 88 GCDVC----ILHLDIKPHNILLDHNFVP-NVSDFGLAKFHPKENDFVSISATRGTIGYIA 142
D C I+H D+KPHN+++DH + D+GLA+F+ ++ A+R G
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG--- 199
Query: 143 PELISRNFGTVSCKSDVYGFGMVLLEM 169
PEL+ ++ D++ G +L M
Sbjct: 200 PELLV-DYQMYDYSLDMWSLGCMLASM 225
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 23/150 (15%)
Query: 26 NVVQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKESRGQSCSWE---KLHEVASGTAH 80
N++ L + R ALV+E + N K+ R ++ ++E+
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDF------KQLRQTLTDYDIRFYMYEILKA--- 143
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVP-NVSDFGLAKFHPKENDFVSISATRGTIG 139
++Y H+ + I+H D+KPHN+++DH + D+GLA+F+ ++ A+R G
Sbjct: 144 -LDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 140 YIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
PEL+ ++ D++ G +L M
Sbjct: 200 ---PELLV-DYQMYDYSLDMWSLGCMLASM 225
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 8/90 (8%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVP-NVSDFGLAKFHPKENDFVSISATRGTIG 139
++Y H+ + I+H D+KPHN+++DH + D+GLA+F+ ++ A+R G
Sbjct: 143 ALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 140 YIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
PEL+ ++ D++ G +L M
Sbjct: 200 ---PELLV-DYQMYDYSLDMWSLGCMLASM 225
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 88 GCDVC----ILHLDIKPHNILLDHNFVP-NVSDFGLAKFHPKENDFVSISATRGTIGYIA 142
D C I+H D+KPHN+++DH + D+GLA+F+ ++ A+R G
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG--- 199
Query: 143 PELISRNFGTVSCKSDVYGFGMVLLEM 169
PEL+ ++ D++ G +L M
Sbjct: 200 PELLV-DYQMYDYSLDMWSLGCMLASM 225
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 88 GCDVC----ILHLDIKPHNILLDHNFVP-NVSDFGLAKFHPKENDFVSISATRGTIGYIA 142
D C I+H D+KPHN+++DH + D+GLA+F+ ++ A+R G
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG--- 199
Query: 143 PELISRNFGTVSCKSDVYGFGMVLLEM 169
PEL+ ++ D++ G +L M
Sbjct: 200 PELLV-DYQMYDYSLDMWSLGCMLASM 225
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 88 GCDVC----ILHLDIKPHNILLDHNFVP-NVSDFGLAKFHPKENDFVSISATRGTIGYIA 142
D C I+H D+KPHN+++DH + D+GLA+F+ ++ A+R G
Sbjct: 142 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG--- 198
Query: 143 PELISRNFGTVSCKSDVYGFGMVLLEM 169
PEL+ ++ D++ G +L M
Sbjct: 199 PELLV-DYQMYDYSLDMWSLGCMLASM 224
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 88 GCDVC----ILHLDIKPHNILLDHNFVP-NVSDFGLAKFHPKENDFVSISATRGTIGYIA 142
D C I+H D+KPHN+++DH + D+GLA+F+ ++ A+R G
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG--- 199
Query: 143 PELISRNFGTVSCKSDVYGFGMVLLEM 169
PEL+ ++ D++ G +L M
Sbjct: 200 PELLV-DYQMYDYSLDMWSLGCMLASM 225
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 88 GCDVC----ILHLDIKPHNILLDHNFVP-NVSDFGLAKFHPKENDFVSISATRGTIGYIA 142
D C I+H D+KPHN+++DH + D+GLA+F+ ++ A+R G
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG--- 199
Query: 143 PELISRNFGTVSCKSDVYGFGMVLLEM 169
PEL+ ++ D++ G +L M
Sbjct: 200 PELLV-DYQMYDYSLDMWSLGCMLASM 225
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 20/175 (11%)
Query: 10 EEFINEVSTIGRI--HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
+ + NE++ + ++ H +++L + +Y M G++D + + K+ +
Sbjct: 99 DSYRNEIAYLNKLQQHSDKIIRLYDY---EITDQYIYMVMECGNIDLNSWLKKKKSID-P 154
Query: 68 WEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKEND 127
WE+ S + +E +H I+H D+KP N L+ + + DFG+A +
Sbjct: 155 WER----KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTT 209
Query: 128 FVSISATRGTIGYIAPELI-----SRNFG----TVSCKSDVYGFGMVLLEMTGGR 173
V + G + Y+ PE I SR G +S KSDV+ G +L MT G+
Sbjct: 210 SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 88 GCDVC----ILHLDIKPHNILLDHNFVP-NVSDFGLAKFHPKENDFVSISATRGTIGYIA 142
D C I+H D+KPHN+++DH + D+GLA+F+ ++ A+R G
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG--- 199
Query: 143 PELISRNFGTVSCKSDVYGFGMVLLEM 169
PEL+ ++ D++ G +L M
Sbjct: 200 PELLV-DYQMYDYSLDMWSLGCMLASM 225
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 88 GCDVC----ILHLDIKPHNILLDHNFVP-NVSDFGLAKFHPKENDFVSISATRGTIGYIA 142
D C I+H D+KPHN+++DH + D+GLA+F+ ++ A+R G
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG--- 199
Query: 143 PELISRNFGTVSCKSDVYGFGMVLLEM 169
PEL+ ++ D++ G +L M
Sbjct: 200 PELLV-DYQMYDYSLDMWSLGCMLASM 225
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 88 GCDVC----ILHLDIKPHNILLDHNFVP-NVSDFGLAKFHPKENDFVSISATRGTIGYIA 142
D C I+H D+KPHN+++DH + D+GLA+F+ ++ A+R G
Sbjct: 142 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG--- 198
Query: 143 PELISRNFGTVSCKSDVYGFGMVLLEM 169
PEL+ ++ D++ G +L M
Sbjct: 199 PELLV-DYQMYDYSLDMWSLGCMLASM 224
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 88 GCDVC----ILHLDIKPHNILLDHNFVP-NVSDFGLAKFHPKENDFVSISATRGTIGYIA 142
D C I+H D+KPHN+++DH + D+GLA+F+ ++ A+R G
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG--- 199
Query: 143 PELISRNFGTVSCKSDVYGFGMVLLEM 169
PEL+ ++ D++ G +L M
Sbjct: 200 PELLV-DYQMYDYSLDMWSLGCMLASM 225
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 8/90 (8%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVP-NVSDFGLAKFHPKENDFVSISATRGTIG 139
++Y H+ + I+H D+KPHN+++DH + D+GLA+F+ ++ A+R G
Sbjct: 148 ALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 204
Query: 140 YIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
PEL+ ++ D++ G +L M
Sbjct: 205 ---PELLV-DYQMYDYSLDMWSLGCMLASM 230
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 88 GCDVC----ILHLDIKPHNILLDHNFVP-NVSDFGLAKFHPKENDFVSISATRGTIGYIA 142
D C I+H D+KPHN+++DH + D+GLA+F+ ++ A+R G
Sbjct: 141 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG--- 197
Query: 143 PELISRNFGTVSCKSDVYGFGMVLLEM 169
PEL+ ++ D++ G +L M
Sbjct: 198 PELLV-DYQMYDYSLDMWSLGCMLASM 223
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 77/189 (40%), Gaps = 29/189 (15%)
Query: 1 MLENSKFSAEEFINEVSTIGRIH-HVNVVQLLGFCSE----------GSKRALVYEFMPN 49
+L N + I EV + ++ H N+VQ FCS G L+ +
Sbjct: 61 LLSNEEEKNRAIIQEVCFMKKLSGHPNIVQ---FCSAASIGKEESDTGQAEFLLLTELCK 117
Query: 50 GSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNF 109
G L + ESRG S + + ++ T ++++H I+H D+K N+LL +
Sbjct: 118 GQLVEFLKKMESRG-PLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQG 175
Query: 110 VPNVSDFGLA---------KFHPKENDFVSISATRGTIG-YIAPELIS--RNFGTVSCKS 157
+ DFG A + + V TR T Y PE+I NF + K
Sbjct: 176 TIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNF-PIGEKQ 234
Query: 158 DVYGFGMVL 166
D++ G +L
Sbjct: 235 DIWALGCIL 243
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 26/170 (15%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
+ E+ + + H N+V+L K LV+EF + L ++ SC+ +
Sbjct: 49 LREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC-DQDLKKYF-------DSCNGDLDP 100
Query: 73 EVASGTAHGIEYLHNGCDVC----ILHLDIKPHNILLDHNFVPNVSDFGLAKFH--PKEN 126
E+ + L G C +LH D+KP N+L++ N +++FGLA+ P
Sbjct: 101 EIVKSF---LFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR- 156
Query: 127 DFVSISATRGTIGYIAPELISRNFGT--VSCKSDVYGFGMVLLEMTGGRR 174
SA T+ Y P+++ FG S D++ G + E+ R
Sbjct: 157 ---CYSAEVVTLWYRPPDVL---FGAKLYSTSIDMWSAGCIFAELANAGR 200
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 24/100 (24%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
GI++LH+ I+H D+KP NI++ + + DFGLA+ T GT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFM 181
Query: 141 IAPELISRNFGTVSC--------KSDVYGFGMVLLEMTGG 172
+ PE+++R + D++ G ++ EM G
Sbjct: 182 MTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + DF LA+ +++ ATR Y
Sbjct: 137 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFYLARH--TDDEMTGYVATR---WY 188
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 189 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + D GLA+ +++ ATR Y
Sbjct: 137 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDAGLARH--TDDEMTGYVATR---WY 188
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 189 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + FGLA+ +++ ATR Y
Sbjct: 137 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLARH--TDDEMTGYVATR---WY 188
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 189 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 32/132 (24%)
Query: 26 NVVQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIE 83
N+V+LL + + +L++E++ N + ++P + T + I
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYP-----------------TLTDYDIR 129
Query: 84 Y----LHNGCDVC----ILHLDIKPHNILLDHNFVP-NVSDFGLAKFHPKENDFVSISAT 134
Y L D C I+H D+KPHN+++DH + D+GLA+F+ ++ A+
Sbjct: 130 YYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVAS 189
Query: 135 RGTIGYIAPELI 146
R G PEL+
Sbjct: 190 RYFKG---PELL 198
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 32/132 (24%)
Query: 26 NVVQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIE 83
N+V+LL + + +L++E++ N + ++P + T + I
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYP-----------------TLTDYDIR 129
Query: 84 Y----LHNGCDVC----ILHLDIKPHNILLDHNFVP-NVSDFGLAKFHPKENDFVSISAT 134
Y L D C I+H D+KPHN+++DH + D+GLA+F+ ++ A+
Sbjct: 130 YYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVAS 189
Query: 135 RGTIGYIAPELI 146
R G PEL+
Sbjct: 190 RYFKG---PELL 198
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 32/132 (24%)
Query: 26 NVVQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIE 83
N+V+LL + + +L++E++ N + ++P + T + I
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYP-----------------TLTDYDIR 128
Query: 84 Y----LHNGCDVC----ILHLDIKPHNILLDHNFVP-NVSDFGLAKFHPKENDFVSISAT 134
Y L D C I+H D+KPHN+++DH + D+GLA+F+ ++ A+
Sbjct: 129 YYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVAS 188
Query: 135 RGTIGYIAPELI 146
R G PEL+
Sbjct: 189 RYFKG---PELL 197
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 24/166 (14%)
Query: 13 INEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLH 72
I EVS + + H N+++L + L++E+ N L +++ + S +
Sbjct: 81 IREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYM----DKNPDVSMRVIK 135
Query: 73 EVASGTAHGIEYLHN-GCDVCILHLDIKPHNILL---DHNFVP--NVSDFGLAK-FHPKE 125
+G+ + H+ C LH D+KP N+LL D + P + DFGLA+ F
Sbjct: 136 SFLYQLINGVNFCHSRRC----LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPI 191
Query: 126 NDFVSISATRGTIGYIAPELI--SRNFGTVSCKSDVYGFGMVLLEM 169
F + T+ Y PE++ SR++ T D++ + EM
Sbjct: 192 RQF---THEIITLWYRPPEILLGSRHYST---SVDIWSIACIWAEM 231
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 82/192 (42%), Gaps = 39/192 (20%)
Query: 1 MLENSKFSAEEFINEVSTIGRIHHVNVVQLLGF---CSEGSKRAL----VYEFMPNGSLD 53
++++ +F E + + + +HH N+VQL + E +R + V E++P+ +L
Sbjct: 56 VIQDPRFRNRE-LQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLH 113
Query: 54 RHIFPKESRGQSCSWEKLHEVASGTAHGIEYLHN-----GC----DVCILHLDIKPHNIL 104
R C +VA +L GC V + H DIKPHN+L
Sbjct: 114 R----------CCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVL 163
Query: 105 LDH-NFVPNVSDFGLA-KFHPKENDFVSISATRGTIGYIAPELISRNFGT--VSCKSDVY 160
++ + + DFG A K P E + I + Y APELI FG + D++
Sbjct: 164 VNEADGTLKLCDFGSAKKLSPSEPNVAYICSRY----YRAPELI---FGNQHYTTAVDIW 216
Query: 161 GFGMVLLEMTGG 172
G + EM G
Sbjct: 217 SVGCIFAEMMLG 228
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 72/171 (42%), Gaps = 19/171 (11%)
Query: 7 FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSC 66
F AEE + + +V L G EG + E + GSL + + + Q C
Sbjct: 112 FRAEELM----ACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV-----KEQGC 162
Query: 67 SWEKLHEVASGTA-HGIEYLHNGCDVCILHLDIKPHNILLDHNFV-PNVSDFGLAK-FHP 123
E G A G+EYLH+ ILH D+K N+LL + + DFG A P
Sbjct: 163 LPEDRALYYLGQALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQP 219
Query: 124 K--ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
D ++ GT ++APE++ + K DV+ ++L M G
Sbjct: 220 DGLGKDLLTGDYIPGTETHMAPEVVLGR--SCDAKVDVWSSCCMMLHMLNG 268
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + D GLA+ +++ ATR Y
Sbjct: 137 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDRGLARH--TDDEMTGYVATR---WY 188
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 189 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 32/132 (24%)
Query: 26 NVVQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIE 83
N+V+LL + + +L++E++ N + ++P + T + I
Sbjct: 89 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYP-----------------TLTDYDIR 130
Query: 84 Y----LHNGCDVC----ILHLDIKPHNILLDHNFVP-NVSDFGLAKFHPKENDFVSISAT 134
Y L D C I+H D+KPHN+++DH + D+GLA+F+ ++ A+
Sbjct: 131 YYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVAS 190
Query: 135 RGTIGYIAPELI 146
R G PEL+
Sbjct: 191 RYFKG---PELL 199
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 71/169 (42%), Gaps = 27/169 (15%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
E IN S + H N+V+ + A+V E+ G L F + S ++
Sbjct: 64 EIINHRS----LRHPNIVRFKEVILTPTHLAIVMEYASGGEL----FERICNAGRFSEDE 115
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVP--NVSDFGLAK---FHPKE 125
G+ Y H VC H D+K N LLD + P + DFG +K H +
Sbjct: 116 ARFFFQQLISGVSYCH-AMQVC--HRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP 172
Query: 126 NDFVSISATRGTIGYIAPE-LISRNF-GTVSCKSDVYGFGMVLLEMTGG 172
+T GT YIAPE L+ + + G V +DV+ G+ L M G
Sbjct: 173 K------STVGTPAYIAPEVLLKKEYDGKV---ADVWSCGVTLYVMLVG 212
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 32/132 (24%)
Query: 26 NVVQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIE 83
N+V+LL + + +L++E++ N + ++P + T + I
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYP-----------------TLTDYDIR 128
Query: 84 Y----LHNGCDVC----ILHLDIKPHNILLDHNFVP-NVSDFGLAKFHPKENDFVSISAT 134
Y L D C I+H D+KPHN+++DH + D+GLA+F+ ++ A+
Sbjct: 129 YYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVAS 188
Query: 135 RGTIGYIAPELI 146
R G PEL+
Sbjct: 189 RYFKG---PELL 197
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 32/132 (24%)
Query: 26 NVVQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIE 83
N+V+LL + + +L++E++ N + ++P + T + I
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYP-----------------TLTDYDIR 128
Query: 84 Y----LHNGCDVC----ILHLDIKPHNILLDHNFVP-NVSDFGLAKFHPKENDFVSISAT 134
Y L D C I+H D+KPHN+++DH + D+GLA+F+ ++ A+
Sbjct: 129 YYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVAS 188
Query: 135 RGTIGYIAPELI 146
R G PEL+
Sbjct: 189 RYFKG---PELL 197
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 32/132 (24%)
Query: 26 NVVQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIE 83
N+V+LL + + +L++E++ N + ++P + T + I
Sbjct: 108 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYP-----------------TLTDYDIR 149
Query: 84 Y----LHNGCDVC----ILHLDIKPHNILLDHNFVP-NVSDFGLAKFHPKENDFVSISAT 134
Y L D C I+H D+KPHN+++DH + D+GLA+F+ ++ A+
Sbjct: 150 YYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVAS 209
Query: 135 RGTIGYIAPELI 146
R G PEL+
Sbjct: 210 RYFKG---PELL 218
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 32/132 (24%)
Query: 26 NVVQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIE 83
N+V+LL + + +L++E++ N + ++P + T + I
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYP-----------------TLTDYDIR 128
Query: 84 Y----LHNGCDVC----ILHLDIKPHNILLDHNFVP-NVSDFGLAKFHPKENDFVSISAT 134
Y L D C I+H D+KPHN+++DH + D+GLA+F+ ++ A+
Sbjct: 129 YYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVAS 188
Query: 135 RGTIGYIAPELI 146
R G PEL+
Sbjct: 189 RYFKG---PELL 197
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 32/132 (24%)
Query: 26 NVVQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIE 83
N+V+LL + + +L++E++ N + ++P + T + I
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYP-----------------TLTDYDIR 128
Query: 84 Y----LHNGCDVC----ILHLDIKPHNILLDHNFVP-NVSDFGLAKFHPKENDFVSISAT 134
Y L D C I+H D+KPHN+++DH + D+GLA+F+ ++ A+
Sbjct: 129 YYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVAS 188
Query: 135 RGTIGYIAPELI 146
R G PEL+
Sbjct: 189 RYFKG---PELL 197
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 32/132 (24%)
Query: 26 NVVQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGIE 83
N+V+LL + + +L++E++ N + ++P + T + I
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYP-----------------TLTDYDIR 128
Query: 84 Y----LHNGCDVC----ILHLDIKPHNILLDHNFVP-NVSDFGLAKFHPKENDFVSISAT 134
Y L D C I+H D+KPHN+++DH + D+GLA+F+ ++ A+
Sbjct: 129 YYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVAS 188
Query: 135 RGTIGYIAPELI 146
R G PEL+
Sbjct: 189 RYFKG---PELL 197
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 71/169 (42%), Gaps = 27/169 (15%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
E IN S + H N+V+ + A+V E+ G L F + S ++
Sbjct: 65 EIINHRS----LRHPNIVRFKEVILTPTHLAIVMEYASGGEL----FERICNAGRFSEDE 116
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVP--NVSDFGLAK---FHPKE 125
G+ Y H VC H D+K N LLD + P + DFG +K H +
Sbjct: 117 ARFFFQQLISGVSYCH-AMQVC--HRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP 173
Query: 126 NDFVSISATRGTIGYIAPE-LISRNF-GTVSCKSDVYGFGMVLLEMTGG 172
+T GT YIAPE L+ + + G V +DV+ G+ L M G
Sbjct: 174 K------STVGTPAYIAPEVLLKKEYDGKV---ADVWSCGVTLYVMLVG 213
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 74/177 (41%), Gaps = 35/177 (19%)
Query: 9 AEEFINEVSTIGRIHHVNVVQLLG-FCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
A+ E+ + ++H N++ LL F + S ++ +D ++ Q
Sbjct: 67 AKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL------SQVIQ 120
Query: 68 WEKLHEVASGTAH----GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHP 123
E HE S + GI++LH+ I+H D+KP NI++ + + DFGLA+
Sbjct: 121 MELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--- 174
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSC--------KSDVYGFGMVLLEMTGG 172
T GT + P +++R + D++ G+++ EM G
Sbjct: 175 ----------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 74/177 (41%), Gaps = 35/177 (19%)
Query: 9 AEEFINEVSTIGRIHHVNVVQLLG-FCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
A+ E+ + ++H N++ LL F + S ++ +D ++ Q
Sbjct: 67 AKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL------SQVIQ 120
Query: 68 WEKLHEVASGTAH----GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHP 123
E HE S + GI++LH+ I+H D+KP NI++ + + DFGLA+
Sbjct: 121 MELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--- 174
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSC--------KSDVYGFGMVLLEMTGG 172
T GT + P +++R + D++ G+++ EM G
Sbjct: 175 ----------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 15/101 (14%)
Query: 24 HVNVVQLLGFCSEGSKRA--LVYEFMPNGSLDRHIFPKESRGQSCSWEKLHE--VASGTA 79
H N+V LL + R LV+++M D H + + E +H+ V
Sbjct: 68 HENIVNLLNVLRADNDRDVYLVFDYM---ETDLHAVIRAN-----ILEPVHKQYVVYQLI 119
Query: 80 HGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK 120
I+YLH+G +LH D+KP NILL+ V+DFGL++
Sbjct: 120 KVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 66/163 (40%), Gaps = 17/163 (10%)
Query: 23 HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGI 82
H +VV+ +E + E+ GSL I +L ++ G+
Sbjct: 65 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 124
Query: 83 EYLHNGCDVCILHLDIKPHNILLDHNFVPNVS-------DFGLAKFHPKENDFVSIS--- 132
Y+H+ + ++H+DIKP NI + +PN + D+ K K D ++
Sbjct: 125 RYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRIS 181
Query: 133 ---ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
G ++A E++ N+ T K+D++ + ++ G
Sbjct: 182 SPQVEEGDSRFLANEVLQENY-THLPKADIFALALTVVXAAGA 223
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
G++Y+H+ I+H D+KP N+ ++ + + D GLA+ +++ ATR Y
Sbjct: 137 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDGGLARH--TDDEMTGYVATR---WY 188
Query: 141 IAPELISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
APE I N+ + D++ G ++ E+ GR
Sbjct: 189 RAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 70/169 (41%), Gaps = 27/169 (15%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
E IN S + H N+V+ + A++ E+ G L I S ++
Sbjct: 66 EIINHRS----LRHPNIVRFKEVILTPTHLAIIMEYASGGELYERI----CNAGRFSEDE 117
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVP--NVSDFGLAK---FHPKE 125
G+ Y H+ + I H D+K N LLD + P + DFG +K H +
Sbjct: 118 ARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP 174
Query: 126 NDFVSISATRGTIGYIAPELISRN--FGTVSCKSDVYGFGMVLLEMTGG 172
+T GT YIAPE++ R G + +DV+ G+ L M G
Sbjct: 175 K------STVGTPAYIAPEVLLRQEYDGKI---ADVWSCGVTLYVMLVG 214
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 10/93 (10%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
GI++LH+ I+H D+KP NI++ + + DFGLA+ V TR Y
Sbjct: 140 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTR---YY 193
Query: 141 IAPELISRNFGT-VSCKSDVYGFGMVLLEMTGG 172
APE+I G D++ G ++ EM G
Sbjct: 194 RAPEVI---LGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 72/176 (40%), Gaps = 37/176 (21%)
Query: 9 AEEFINEVSTIGRIHHVNVVQLLGFCS------EGSKRALVYEFMPNGSLDRHIFPKESR 62
A+ E+ + ++H N++ LL + E LV E M + +L + I
Sbjct: 67 AKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI------ 119
Query: 63 GQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFH 122
E++ + GI++LH+ I+H D+KP NI++ + + DFGLA+
Sbjct: 120 QMELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR-- 174
Query: 123 PKENDFVSISATRGTIGYIAPELISRNFGTVSC--------KSDVYGFGMVLLEMT 170
T GT + P +++R + D++ G ++ EM
Sbjct: 175 -----------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 33/116 (28%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAK-------------FHPKEND 127
G++Y+H+ ILH D+KP N L++ + V DFGLA+ P+E+D
Sbjct: 168 GVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDD 224
Query: 128 --FVSISATRG----------TIGYIAPELI--SRNFGTVSCKSDVYGFGMVLLEM 169
V+ T+ T Y APELI N+ DV+ G + E+
Sbjct: 225 MNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEA---IDVWSIGCIFAEL 277
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 24/98 (24%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
GI++LH+ I+H D+KP NI++ + + DFGLA+ T GT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFM 181
Query: 141 IAPELISRNFGTVSC--------KSDVYGFGMVLLEMT 170
+ PE+++R + D++ G ++ EM
Sbjct: 182 MEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 73/177 (41%), Gaps = 35/177 (19%)
Query: 9 AEEFINEVSTIGRIHHVNVVQLLG-FCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
A+ E+ + ++H N++ LL F + S ++ +D ++ Q
Sbjct: 67 AKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL------SQVIQ 120
Query: 68 WEKLHEVASGTAH----GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHP 123
E HE S + GI++LH+ I+H D+KP NI++ + + DFGLA+
Sbjct: 121 MELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--- 174
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSC--------KSDVYGFGMVLLEMTGG 172
T GT + P +++R + D++ G ++ EM G
Sbjct: 175 ----------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 23 HHVNVVQLLGFCSEGSKRAL-VYEFMPNGSLDRHIFPKESRG-QSCSWEKLHEVASGTAH 80
H V +V + G K L V E + G L I + RG Q+ + + E+
Sbjct: 72 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI---QDRGDQAFTEREASEIMKSIGE 128
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDH---NFVPNVSDFGLAK 120
I+YLH+ + I H D+KP N+L N + ++DFG AK
Sbjct: 129 AIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 73/177 (41%), Gaps = 35/177 (19%)
Query: 9 AEEFINEVSTIGRIHHVNVVQLLG-FCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
A+ E+ + ++H N++ LL F + S ++ +D ++ Q
Sbjct: 67 AKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL------SQVIQ 120
Query: 68 WEKLHEVASGTAH----GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHP 123
E HE S + GI++LH+ I+H D+KP NI++ + + DFGLA+
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--- 174
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSC--------KSDVYGFGMVLLEMTGG 172
T GT + P +++R + D++ G ++ EM G
Sbjct: 175 ----------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 66/163 (40%), Gaps = 17/163 (10%)
Query: 23 HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGI 82
H +VV+ +E + E+ GSL I +L ++ G+
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 83 EYLHNGCDVCILHLDIKPHNILLDHNFVPNVS-------DFGLAKFHPKENDFVSIS--- 132
Y+H+ + ++H+DIKP NI + +PN + D+ K K D ++
Sbjct: 127 RYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRIS 183
Query: 133 ---ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
G ++A E++ N+ T K+D++ + ++ G
Sbjct: 184 SPQVEEGDSRFLANEVLQENY-THLPKADIFALALTVVCAAGA 225
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 66/163 (40%), Gaps = 17/163 (10%)
Query: 23 HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGI 82
H +VV+ +E + E+ GSL I +L ++ G+
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 83 EYLHNGCDVCILHLDIKPHNILLDHNFVPNVS-------DFGLAKFHPKENDFVSIS--- 132
Y+H+ + ++H+DIKP NI + +PN + D+ K K D ++
Sbjct: 127 RYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRIS 183
Query: 133 ---ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
G ++A E++ N+ T K+D++ + ++ G
Sbjct: 184 SPQVEEGDSRFLANEVLQENY-THLPKADIFALALTVVCAAGA 225
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 24/100 (24%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
GI++LH+ I+H D+KP NI++ + + DFGLA+ T GT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-------------TAGTSFM 181
Query: 141 IAPELISRNFGTVSC--------KSDVYGFGMVLLEMTGG 172
+ P +++R + D++ G ++ EM G
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 66/163 (40%), Gaps = 17/163 (10%)
Query: 23 HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEKLHEVASGTAHGI 82
H +VV+ +E + E+ GSL I +L ++ G+
Sbjct: 69 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 128
Query: 83 EYLHNGCDVCILHLDIKPHNILLDHNFVPNVS-------DFGLAKFHPKENDFVSIS--- 132
Y+H+ + ++H+DIKP NI + +PN + D+ K K D ++
Sbjct: 129 RYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRIS 185
Query: 133 ---ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
G ++A E++ N+ T K+D++ + ++ G
Sbjct: 186 SPQVEEGDSRFLANEVLQENY-THLPKADIFALALTVVCAAGA 227
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 16/70 (22%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
GI++LH+ I+H D+KP NI++ + + DFGLA+ T GT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFM 181
Query: 141 IAPELISRNF 150
+ PE+++R +
Sbjct: 182 MEPEVVTRYY 191
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 10/93 (10%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
GI++LH+ I+H D+KP NI++ + + DFGLA+ TR Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTR---YY 191
Query: 141 IAPELISRNFGT-VSCKSDVYGFGMVLLEMTGG 172
APE+I G + D++ G ++ E+ G
Sbjct: 192 RAPEVI---LGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 24/100 (24%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
GI++LH+ I+H D+KP NI++ + + DFGLA+ T GT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFM 181
Query: 141 IAPELISRNFGTVSC--------KSDVYGFGMVLLEMTGG 172
+ P +++R + D++ G ++ EM G
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 24/100 (24%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
GI++LH+ I+H D+KP NI++ + + DFGLA+ T GT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFM 181
Query: 141 IAPELISRNFGTVSC--------KSDVYGFGMVLLEMTGG 172
+ P +++R + D++ G ++ EM G
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 24/100 (24%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
GI++LH+ I+H D+KP NI++ + + DFGLA+ T GT
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFM 182
Query: 141 IAPELISRNFGTVSC--------KSDVYGFGMVLLEMTGG 172
+ P +++R + D++ G ++ EM G
Sbjct: 183 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 24/100 (24%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
GI++LH+ I+H D+KP NI++ + + DFGLA+ T GT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFM 181
Query: 141 IAPELISRNFGTVSC--------KSDVYGFGMVLLEMTGG 172
+ P +++R + D++ G ++ EM G
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 72/176 (40%), Gaps = 37/176 (21%)
Query: 9 AEEFINEVSTIGRIHHVNVVQLLGFCS------EGSKRALVYEFMPNGSLDRHIFPKESR 62
A+ E+ + ++H N++ LL + E LV E M + +L + I
Sbjct: 67 AKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI------ 119
Query: 63 GQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFH 122
E++ + GI++LH+ I+H D+KP NI++ + + DFGLA+
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR-- 174
Query: 123 PKENDFVSISATRGTIGYIAPELISRNFGTVSC--------KSDVYGFGMVLLEMT 170
T GT + P +++R + D++ G ++ EM
Sbjct: 175 -----------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 72/176 (40%), Gaps = 37/176 (21%)
Query: 9 AEEFINEVSTIGRIHHVNVVQLLGFCS------EGSKRALVYEFMPNGSLDRHIFPKESR 62
A+ E+ + ++H N++ LL + E LV E M + +L + I
Sbjct: 67 AKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI------ 119
Query: 63 GQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFH 122
E++ + GI++LH+ I+H D+KP NI++ + + DFGLA+
Sbjct: 120 QMELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR-- 174
Query: 123 PKENDFVSISATRGTIGYIAPELISRNFGTVSC--------KSDVYGFGMVLLEMT 170
T GT + P +++R + D++ G ++ EM
Sbjct: 175 -----------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 72/176 (40%), Gaps = 37/176 (21%)
Query: 9 AEEFINEVSTIGRIHHVNVVQLLGFCS------EGSKRALVYEFMPNGSLDRHIFPKESR 62
A+ E+ + ++H N++ LL + E LV E M + +L + I
Sbjct: 60 AKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI------ 112
Query: 63 GQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFH 122
E++ + GI++LH+ I+H D+KP NI++ + + DFGLA+
Sbjct: 113 QMELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR-- 167
Query: 123 PKENDFVSISATRGTIGYIAPELISRNFGTVSC--------KSDVYGFGMVLLEMT 170
T GT + P +++R + D++ G ++ EM
Sbjct: 168 -----------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 71/171 (41%), Gaps = 19/171 (11%)
Query: 7 FSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSC 66
F AEE + + +V L G EG + E + GSL + + + Q C
Sbjct: 131 FRAEELM----ACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV-----KEQGC 181
Query: 67 SWEKLHEVASGTA-HGIEYLHNGCDVCILHLDIKPHNILLDHNFV-PNVSDFGLAK-FHP 123
E G A G+EYLH+ ILH D+K N+LL + + DFG A P
Sbjct: 182 LPEDRALYYLGQALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQP 238
Query: 124 K--ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMTGG 172
++ GT ++APE++ + K DV+ ++L M G
Sbjct: 239 DGLGKSLLTGDYIPGTETHMAPEVVLGR--SCDAKVDVWSSCCMMLHMLNG 287
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 72/175 (41%), Gaps = 35/175 (20%)
Query: 9 AEEFINEVSTIGRIHHVNVVQLLG-FCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCS 67
A+ E+ + ++H N++ LL F + + ++ +D ++ Q
Sbjct: 67 AKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL------CQVIQ 120
Query: 68 WEKLHEVASGTAH----GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHP 123
E HE S + GI++LH+ I+H D+KP NI++ + + DFGLA+
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR--- 174
Query: 124 KENDFVSISATRGTIGYIAPELISRNFGTVSC--------KSDVYGFGMVLLEMT 170
T GT + P +++R + D++ G ++ EM
Sbjct: 175 ----------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 70/169 (41%), Gaps = 27/169 (15%)
Query: 11 EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKESRGQSCSWEK 70
E IN S + H N+V+ + A+V E+ G L F + S ++
Sbjct: 65 EIINHRS----LRHPNIVRFKEVILTPTHLAIVMEYASGGEL----FERICNAGRFSEDE 116
Query: 71 LHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVP--NVSDFGLAK---FHPKE 125
G+ Y H VC H D+K N LLD + P + FG +K H +
Sbjct: 117 ARFFFQQLISGVSYCH-AMQVC--HRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQP 173
Query: 126 NDFVSISATRGTIGYIAPE-LISRNF-GTVSCKSDVYGFGMVLLEMTGG 172
+T GT YIAPE L+ + + G V +DV+ G+ L M G
Sbjct: 174 K------STVGTPAYIAPEVLLKKEYDGKV---ADVWSCGVTLYVMLVG 213
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 18/117 (15%)
Query: 64 QSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKF-- 121
Q S + + T ++ LH G +V +H D+KP N+L++ N V DFGLA+
Sbjct: 107 QMLSDDHIQYFIYQTLRAVKVLH-GSNV--IHRDLKPSNLLINSNCDLKVCDFGLARIID 163
Query: 122 -------HP--KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 169
P +++ V ATR Y APE++ + S DV+ G +L E+
Sbjct: 164 ESAADNSEPTGQQSGMVEFVATR---WYRAPEVMLTS-AKYSRAMDVWSCGCILAEL 216
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
GI++LH+ I+H D+KP NI++ + + DFGLA+ TR Y
Sbjct: 136 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTR---YY 189
Query: 141 IAPELISRNFGT-VSCKSDVYGFGMVLLEMTGG 172
APE+I G D++ G ++ E+ G
Sbjct: 190 RAPEVI---LGMGYKENVDIWSVGCIMGELVKG 219
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLD-HNFVPNVSDFGLAK-FHPKENDFVSISATRGTI 138
G++Y+H+ +LH D+KP N+ ++ + V + DFGLA+ P + +S T
Sbjct: 132 GLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTK 188
Query: 139 GYIAPE-LISRNFGTVSCKSDVYGFGMVLLEMTGGR 173
Y +P L+S N T + D++ G + EM G+
Sbjct: 189 WYRSPRLLLSPNNYTKAI--DMWAAGCIFAEMLTGK 222
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 24/98 (24%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
GI++LH+ I+H D+KP NI++ + + DFGLA+ T GT
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFM 219
Query: 141 IAPELISRNFGTVSC--------KSDVYGFGMVLLEMT 170
+ P +++R + D++ G ++ EM
Sbjct: 220 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 35.0 bits (79), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 24/98 (24%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
GI++LH+ I+H D+KP NI++ + + DFGLA+ T GT
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFM 182
Query: 141 IAPELISRNFGTVSC--------KSDVYGFGMVLLEMT 170
+ P +++R + D++ G ++ EM
Sbjct: 183 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 53/135 (39%), Gaps = 29/135 (21%)
Query: 57 FPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILL----------D 106
F KE+ Q + +A H + +LH + H D+KP NIL +
Sbjct: 120 FLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYNE 176
Query: 107 H---------NFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKS 157
H N V+DFG A F + + +I ATR Y PE+I C
Sbjct: 177 HKSCEEKSVKNTSIRVADFGSATFDHEHH--TTIVATR---HYRPPEVILELGWAQPC-- 229
Query: 158 DVYGFGMVLLEMTGG 172
DV+ G +L E G
Sbjct: 230 DVWSIGCILFEYYRG 244
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 35.0 bits (79), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 24/98 (24%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
GI++LH+ I+H D+KP NI++ + + DFGLA+ T GT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFM 181
Query: 141 IAPELISRNFGTVSC--------KSDVYGFGMVLLEMT 170
+ P +++R + D++ G ++ EM
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 35.0 bits (79), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 24/98 (24%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
GI++LH+ I+H D+KP NI++ + + DFGLA+ T GT
Sbjct: 137 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFM 180
Query: 141 IAPELISRNFGTVSC--------KSDVYGFGMVLLEMT 170
+ P +++R + D++ G ++ EM
Sbjct: 181 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 218
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 35.0 bits (79), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 24/98 (24%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
GI++LH+ I+H D+KP NI++ + + DFGLA+ T GT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFM 181
Query: 141 IAPELISRNFGTVSC--------KSDVYGFGMVLLEMT 170
+ P +++R + D++ G ++ EM
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 35.0 bits (79), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 24/98 (24%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
GI++LH+ I+H D+KP NI++ + + DFGLA+ T GT
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFM 219
Query: 141 IAPELISRNFGTVSC--------KSDVYGFGMVLLEMT 170
+ P +++R + D++ G ++ EM
Sbjct: 220 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 24/98 (24%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
GI++LH+ I+H D+KP NI++ + + DFGLA+ T GT
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFM 174
Query: 141 IAPELISRNFGTVSC--------KSDVYGFGMVLLEMT 170
+ P +++R + D++ G ++ EM
Sbjct: 175 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 24/98 (24%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
GI++LH+ I+H D+KP NI++ + + DFGLA+ T GT
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFM 175
Query: 141 IAPELISRNFGTVSC--------KSDVYGFGMVLLEMT 170
+ P +++R + D++ G ++ EM
Sbjct: 176 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 53/135 (39%), Gaps = 29/135 (21%)
Query: 57 FPKESRGQSCSWEKLHEVASGTAHGIEYLHNGCDVCILHLDIKPHNILL----------D 106
F KE+ Q + +A H + +LH + H D+KP NIL +
Sbjct: 143 FLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYNE 199
Query: 107 H---------NFVPNVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKS 157
H N V+DFG A F + + +I ATR Y PE+I C
Sbjct: 200 HKSCEEKSVKNTSIRVADFGSATFDHEHH--TTIVATR---HYRPPEVILELGWAQPC-- 252
Query: 158 DVYGFGMVLLEMTGG 172
DV+ G +L E G
Sbjct: 253 DVWSIGCILFEYYRG 267
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 24/98 (24%)
Query: 81 GIEYLHNGCDVCILHLDIKPHNILLDHNFVPNVSDFGLAKFHPKENDFVSISATRGTIGY 140
GI++LH+ I+H D+KP NI++ + + DFGLA+ T GT
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFM 182
Query: 141 IAPELISRNFGTVSC--------KSDVYGFGMVLLEMT 170
+ P +++R + D++ G ++ EM
Sbjct: 183 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,406,170
Number of Sequences: 62578
Number of extensions: 311666
Number of successful extensions: 2342
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 277
Number of HSP's that attempted gapping in prelim test: 768
Number of HSP's gapped (non-prelim): 1109
length of query: 238
length of database: 14,973,337
effective HSP length: 96
effective length of query: 142
effective length of database: 8,965,849
effective search space: 1273150558
effective search space used: 1273150558
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)