Query 037764
Match_columns 155
No_of_seqs 149 out of 1059
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 06:27:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037764.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037764hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g22_A Hydroxycinnamoyl-COA sh 99.9 8.1E-28 2.8E-32 206.5 12.2 119 31-153 3-125 (439)
2 2bgh_A Vinorine synthase; VS, 99.9 4.9E-27 1.7E-31 200.7 11.1 120 34-153 3-124 (421)
3 2e1v_A Acyl transferase; BAHD 99.9 2.5E-23 8.6E-28 178.9 11.4 120 34-154 5-135 (454)
4 2xr7_A Malonyltransferase; xen 99.9 1.3E-23 4.6E-28 180.4 9.1 118 36-154 2-130 (453)
5 2rkv_A Trichothecene 3-O-acety 99.5 9.8E-15 3.4E-19 124.8 7.0 82 57-139 5-102 (451)
6 1u0j_A DNA replication protein 15.5 87 0.003 24.8 2.5 31 71-111 104-134 (267)
7 3u5c_Q RP61R, 40S ribosomal pr 14.1 53 0.0018 23.9 0.8 21 86-106 74-94 (143)
8 1q9j_A PAPA5, polyketide synth 13.6 1.2E+02 0.0042 23.8 2.9 51 55-112 6-58 (422)
9 3j20_K 30S ribosomal protein S 10.7 90 0.0031 22.4 1.1 21 86-106 71-91 (135)
10 3r8n_I 30S ribosomal protein S 10.4 1.3E+02 0.0044 21.3 1.9 22 86-107 69-90 (127)
No 1
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=99.95 E-value=8.1e-28 Score=206.53 Aligned_cols=119 Identities=25% Similarity=0.484 Sum_probs=100.3
Q ss_pred CceeeEEEeeeeEEeCCCCCCCCcceecCCccccccccCcccEEEEecCCCcccchhhhHHHHHHHHHhhcccccccccc
Q 037764 31 TATSDVQIISTEAIKPSSPTPKHLRTYKLSLPDQLCSKLYAPLVFFYSTNCKQQDLRKKSDLLKQSLAKSLTHYYPFAGR 110 (155)
Q Consensus 31 ~~~~~V~i~~~~~V~Ps~ptp~~~~~l~LS~lD~~~~~~~v~~v~fY~~~~~~~~~~~~~~~Lk~SLs~aL~~yyplAGR 110 (155)
+..|+|++.++++|+|+.|||. +.++||+||+.+..+|++.+|||+.+.. .....+++||+|||++|++|||||||
T Consensus 3 m~~~~V~i~~~~~V~P~~~tp~--~~~~LS~lD~~~~~~~~~~~~~y~~~~~--~~~~~~~~Lk~sLs~~L~~f~plAGR 78 (439)
T 4g22_A 3 MGSMKIEVKESTMVRPAQETPG--RNLWNSNVDLVVPNFHTPSVYFYRPTGS--SNFFDAKVLKDALSRALVPFYPMAGR 78 (439)
T ss_dssp ---CCEEEEEEEEECCSSCCCC--CEECCCHHHHSCCTTCCCEEEEECCCSC--TTTTCHHHHHHHHHHHTTTTGGGGCE
T ss_pred CCceEEEEeeeEEEeCCCCCCC--CeecCChhHhCccccceeeEEEEcCCCC--ccccHHHHHHHHHHHHHhhcccccee
Confidence 3448899999999999999875 4699999999877889999999997543 22346899999999999999999999
Q ss_pred cC----CceEEEeCCCCeEEEEEEcCCCccccCCCCChhhhcCCCCC
Q 037764 111 LI----DSFSVDCNDHGAAFIDANVGCDISKFLQPPDMELLQQLIPP 153 (155)
Q Consensus 111 L~----~~~~I~cn~~GV~fveA~~~~~l~dl~~~p~~~~~~~LvP~ 153 (155)
|+ |+++|+|||+||.|+||+++++++|+++..+...+++|+|.
T Consensus 79 l~~~~~g~~~i~c~~~Gv~fv~A~~d~~l~~l~~~~p~~~~~~l~p~ 125 (439)
T 4g22_A 79 LKRDEDGRIEIECNGEGVLFVEAESDGVVDDFGDFAPTLELRRLIPA 125 (439)
T ss_dssp EEECTTSCEEEECCCCCEEEEEEEESSCGGGGTTCCCCGGGGGGSCC
T ss_pred eeeCCCCCEEEEECCCCCEEEEEEcCCcHHHhcCCCCCHHHHhcCCC
Confidence 97 58999999999999999999999999774322356788875
No 2
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=99.94 E-value=4.9e-27 Score=200.71 Aligned_cols=120 Identities=43% Similarity=0.690 Sum_probs=104.1
Q ss_pred eeEEEeeeeEEeCCCCCCCCcceecCCccccccccCcccEEEEecCCCcc-cchhhhHHHHHHHHHhhcccccccccccC
Q 037764 34 SDVQIISTEAIKPSSPTPKHLRTYKLSLPDQLCSKLYAPLVFFYSTNCKQ-QDLRKKSDLLKQSLAKSLTHYYPFAGRLI 112 (155)
Q Consensus 34 ~~V~i~~~~~V~Ps~ptp~~~~~l~LS~lD~~~~~~~v~~v~fY~~~~~~-~~~~~~~~~Lk~SLs~aL~~yyplAGRL~ 112 (155)
|+|++.++++|+|+.|||.+.+.++||+||+.....|++.+|||+.+... .+....+++||+||+++|++||||||||+
T Consensus 3 m~v~v~~~~~V~P~~ptp~~~~~~~LS~lD~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~ 82 (421)
T 2bgh_A 3 PQMEKVSEELILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDSNLDPAQTSQHLKQSLSKVLTHFYPLAGRIN 82 (421)
T ss_dssp -CEEEEEEEEEECSSCCCTTSCCCBCCHHHHTSCSSEEEEEEEECCCSSCCCCHHHHHHHHHHHHHHHTTTSGGGGSEEE
T ss_pred ceEEEeeeEEEeCCCCCCCCCcccCCChHHhcccccccceEEEEeCCCccccchhhHHHHHHHHHHHHhhhcchhccccC
Confidence 67999999999999998875568999999997667899999999865431 12456899999999999999999999999
Q ss_pred CceEEEeCCCCeEEEEEEcCCCccccCCC-CChhhhcCCCCC
Q 037764 113 DSFSVDCNDHGAAFIDANVGCDISKFLQP-PDMELLQQLIPP 153 (155)
Q Consensus 113 ~~~~I~cn~~GV~fveA~~~~~l~dl~~~-p~~~~~~~LvP~ 153 (155)
++++|+|||+||.|+||+++++++|+++. |+...+++|+|.
T Consensus 83 ~~~~i~c~~~Gv~fv~A~~d~~l~~~~~~~p~~~~~~~l~p~ 124 (421)
T 2bgh_A 83 VNSSVDCNDSGVPFVEARVQAQLSQAIQNVVELEKLDQYLPS 124 (421)
T ss_dssp TTTEEECCCCCEEEEEEEESSCHHHHHSCCSSGGGGGGGSSS
T ss_pred CCcEEEEcCCceEEEEEEEcCCHHHHhccCCChHHHHhcCCC
Confidence 88999999999999999999999999875 666567888875
No 3
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=99.89 E-value=2.5e-23 Score=178.88 Aligned_cols=120 Identities=19% Similarity=0.340 Sum_probs=97.6
Q ss_pred eeEEEeeeeEEeCCCCCCCCcceecCCccccccc-cCcccEEEEecCCCcccc-hhhhHHHHHHHHHhhccccccccccc
Q 037764 34 SDVQIISTEAIKPSSPTPKHLRTYKLSLPDQLCS-KLYAPLVFFYSTNCKQQD-LRKKSDLLKQSLAKSLTHYYPFAGRL 111 (155)
Q Consensus 34 ~~V~i~~~~~V~Ps~ptp~~~~~l~LS~lD~~~~-~~~v~~v~fY~~~~~~~~-~~~~~~~Lk~SLs~aL~~yyplAGRL 111 (155)
.+|+|.++++|+|+.+++.. +.++||+||+.+. ..|++.+|||+.+..... ..+.+++||+||+++|++||||||||
T Consensus 5 ~~v~v~~~~~V~P~~~~~~~-~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl 83 (454)
T 2e1v_A 5 PILTVLEQSQVSPPPDTLGD-KSLQLTFFDFFWLRSPPINNLFFYELPITRSQFTETVVPNIKHSLSITLKHFYPFVGKL 83 (454)
T ss_dssp -CEEEEEEEEECCCTTSCCC-EEEECCHHHHTTTTCCCEEEEEEEECCCCHHHHHHTHHHHHHHHHHHHHTTCGGGGSEE
T ss_pred ceEEEEEEEEEeCCCCCCCC-ceecCchHHhhhhccCCccEEEEEeCCCCcchhhHHHHHHHHHHHHHHhhhccccceee
Confidence 46999999999999875433 6899999999755 469999999986542111 34578999999999999999999999
Q ss_pred C--C----ceEEEeC-CCCeEEEEEEcCCCccccCCC-C-ChhhhcCCCCCC
Q 037764 112 I--D----SFSVDCN-DHGAAFIDANVGCDISKFLQP-P-DMELLQQLIPPS 154 (155)
Q Consensus 112 ~--~----~~~I~cn-~~GV~fveA~~~~~l~dl~~~-p-~~~~~~~LvP~~ 154 (155)
+ + +++|+|| ++||.|+||+++++++++.+. + +...+++|+|..
T Consensus 84 ~~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~ 135 (454)
T 2e1v_A 84 VVYPAPTKKPEICYVEGDSVAVTFAECNLDLNELTGNHPRNCDKFYDLVPIL 135 (454)
T ss_dssp EECSSSSSCCEEEECTTCCEEEEEEEECSCGGGTSSSSCEEGGGGGGGSCCC
T ss_pred eeccCCCCCEEEEECCCCcEEEEEEEeCCCHHHhcCCCCCcchhhhcCCCCC
Confidence 7 2 7999999 599999999999999999763 2 344577888864
No 4
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=99.89 E-value=1.3e-23 Score=180.36 Aligned_cols=118 Identities=18% Similarity=0.249 Sum_probs=96.9
Q ss_pred EEEeeeeEEeCCCCCCCCcceecCCccccccc-cCcccEEEEecCCCcccc-hhhhHHHHHHHHHhhcccccccccccC-
Q 037764 36 VQIISTEAIKPSSPTPKHLRTYKLSLPDQLCS-KLYAPLVFFYSTNCKQQD-LRKKSDLLKQSLAKSLTHYYPFAGRLI- 112 (155)
Q Consensus 36 V~i~~~~~V~Ps~ptp~~~~~l~LS~lD~~~~-~~~v~~v~fY~~~~~~~~-~~~~~~~Lk~SLs~aL~~yyplAGRL~- 112 (155)
|+|.++++|+|+.+++.. +.++||+||+.+. ..|++.+|||+.+..... ..+.+++||+||+++|++||||||||+
T Consensus 2 v~v~~~~~V~P~~~~~~~-~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~ 80 (453)
T 2xr7_A 2 ASVIEQCQVVPSPGSATE-LTLPLTYFDHVWLAFHRMRRILFYKLPISRPDFVQTIIPTLKDSLSLTLKYYLPLAGNVAC 80 (453)
T ss_dssp CEEEEESCCCCCTTCCSE-EEEECCHHHHGGGGSCCEEEEEEEECCCCSHHHHHTHHHHHHHHHHHHHTTSGGGGSCCEE
T ss_pred eEEEEEEEecCCCCCCCC-ceECCCHHHhhhhhcCCccEEEEEeCCCCCchhHHHHHHHHHHHHHHHhhhccccCeeEEc
Confidence 889999999999875433 6899999999755 469999999986543111 345789999999999999999999994
Q ss_pred -----CceEEEeC-CCCeEEEEEEcCCCccccCCC--CChhhhcCCCCCC
Q 037764 113 -----DSFSVDCN-DHGAAFIDANVGCDISKFLQP--PDMELLQQLIPPS 154 (155)
Q Consensus 113 -----~~~~I~cn-~~GV~fveA~~~~~l~dl~~~--p~~~~~~~LvP~~ 154 (155)
|+++|+|| ++||.|+||+++++++++.+. .+...+++|+|..
T Consensus 81 ~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~ 130 (453)
T 2xr7_A 81 PQDWSGYPELRYVTGNSVSVIFSESDMDFNYLIGYHPRNTKDFYHFVPQL 130 (453)
T ss_dssp ESSTTCCCEEEEETTCCCEEEEEECCSCHHHHTCSSCCCGGGGGGGSCCC
T ss_pred cCCCCCCEEEEecCCCceEEEEEecCCCHHHhhccCCCChhhhhcCCCCC
Confidence 47999999 599999999999999999753 2445677888864
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=99.53 E-value=9.8e-15 Score=124.77 Aligned_cols=82 Identities=12% Similarity=0.092 Sum_probs=67.8
Q ss_pred ecCCcccccc--ccCcccEEEEecCCCcccchhhhHHHHHHHHHhhcccccccccccC---------CceEEEeCCCCeE
Q 037764 57 YKLSLPDQLC--SKLYAPLVFFYSTNCKQQDLRKKSDLLKQSLAKSLTHYYPFAGRLI---------DSFSVDCNDHGAA 125 (155)
Q Consensus 57 l~LS~lD~~~--~~~~v~~v~fY~~~~~~~~~~~~~~~Lk~SLs~aL~~yyplAGRL~---------~~~~I~cn~~GV~ 125 (155)
++||+||+.. ..+|++.+|||+.+... +..+.+++||+||+++|++||||||||+ |+++|+|++.|+.
T Consensus 5 ~~Ls~lD~~~~~~~~y~~~~~~y~~~~~~-~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~i~~~~~~~~ 83 (451)
T 2rkv_A 5 IQLDTLGQLPGLLSIYTQISLLYPVSDSS-QYPTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFIVPFEDVPR 83 (451)
T ss_dssp EECCGGGGCTTGGGCEEEEEEEEECSCGG-GHHHHHHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEEEECCCSSCE
T ss_pred ccCChhhcCccccccceeEEEEEECCCCC-CHHHHHHHHHHHHHHHHHhCCceeEEEEECCCCCCCCCcEEEeecCCCCe
Confidence 6899999986 57899999999854321 3456789999999999999999999996 2689999887878
Q ss_pred EEEEEcCC-----CccccC
Q 037764 126 FIDANVGC-----DISKFL 139 (155)
Q Consensus 126 fveA~~~~-----~l~dl~ 139 (155)
|++|+++. +++++.
T Consensus 84 ~~va~~~~d~~~p~~~~l~ 102 (451)
T 2rkv_A 84 VVVKDLRDDPSAPTIEGMR 102 (451)
T ss_dssp EEEEECTTCTTSCBHHHHH
T ss_pred EEEEeCCCCCCCCCHHHHH
Confidence 99999875 576664
No 6
>1u0j_A DNA replication protein; AAA+ protein, P-loop atpases, helicase; HET: DNA ADP; 2.10A {Adeno-associated virus - 2} SCOP: c.37.1.20 PDB: 1s9h_A
Probab=15.51 E-value=87 Score=24.76 Aligned_cols=31 Identities=19% Similarity=0.500 Sum_probs=22.4
Q ss_pred ccEEEEecCCCcccchhhhHHHHHHHHHhhccccccccccc
Q 037764 71 APLVFFYSTNCKQQDLRKKSDLLKQSLAKSLTHYYPFAGRL 111 (155)
Q Consensus 71 v~~v~fY~~~~~~~~~~~~~~~Lk~SLs~aL~~yyplAGRL 111 (155)
-..++||.+|... |..|+.+|..++++.|++
T Consensus 104 ~n~~~l~GppgtG----------Kt~~a~ala~~~~l~G~v 134 (267)
T 1u0j_A 104 RNTIWLFGPATTG----------KTNIAEAIAHTVPFYGCV 134 (267)
T ss_dssp CCEEEEECSTTSS----------HHHHHHHHHHHSSCEEEC
T ss_pred CcEEEEECCCCCC----------HHHHHHHHHhhhccccee
Confidence 3479999877664 667777777777777764
No 7
>3u5c_Q RP61R, 40S ribosomal protein S16-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_I 3o30_J 3o2z_J 3u5g_Q 1s1h_I 3jyv_I*
Probab=14.06 E-value=53 Score=23.87 Aligned_cols=21 Identities=24% Similarity=0.309 Sum_probs=17.8
Q ss_pred hhhhHHHHHHHHHhhcccccc
Q 037764 86 LRKKSDLLKQSLAKSLTHYYP 106 (155)
Q Consensus 86 ~~~~~~~Lk~SLs~aL~~yyp 106 (155)
....++.++.++|++|+.||+
T Consensus 74 ~sgQA~AiR~aIArAL~~~~~ 94 (143)
T 3u5c_Q 74 HVSQVYAIRQAIAKGLVAYHQ 94 (143)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred EecHHhHHHHHHHHHHHHHhh
Confidence 345689999999999999964
No 8
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=13.55 E-value=1.2e+02 Score=23.79 Aligned_cols=51 Identities=16% Similarity=0.182 Sum_probs=35.6
Q ss_pred ceecCCccccc-cc-cCcccEEEEecCCCcccchhhhHHHHHHHHHhhcccccccccccC
Q 037764 55 RTYKLSLPDQL-CS-KLYAPLVFFYSTNCKQQDLRKKSDLLKQSLAKSLTHYYPFAGRLI 112 (155)
Q Consensus 55 ~~l~LS~lD~~-~~-~~~v~~v~fY~~~~~~~~~~~~~~~Lk~SLs~aL~~yyplAGRL~ 112 (155)
..++||.+.+. |. .+.+...+-++.+- ..++|+.++.+++..++.|--|+.
T Consensus 6 ~~~pls~~Q~~~~~~~y~~~~~~~l~g~l-------d~~~l~~A~~~lv~rh~~LRt~f~ 58 (422)
T 1q9j_A 6 VIRKLSHSEEVFAQYEVFTSMTIQLRGVI-------DVDALSDAFDALLETHPVLASHLE 58 (422)
T ss_dssp EEEECCHHHHHHHHTTCEEEEEEEEESCC-------CHHHHHHHHHHHHHHCGGGSEEEE
T ss_pred eeecCCHHHHHHHhcCceEEEEEEEecCC-------CHHHHHHHHHHHHHhCccceEEEE
Confidence 46888888774 32 23444444444332 268899999999999999988874
No 9
>3j20_K 30S ribosomal protein S9P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=10.67 E-value=90 Score=22.39 Aligned_cols=21 Identities=10% Similarity=0.301 Sum_probs=17.8
Q ss_pred hhhhHHHHHHHHHhhcccccc
Q 037764 86 LRKKSDLLKQSLAKSLTHYYP 106 (155)
Q Consensus 86 ~~~~~~~Lk~SLs~aL~~yyp 106 (155)
....++.++.++|++|+.|++
T Consensus 71 ~~gQA~AiR~aIarAL~~~~~ 91 (135)
T 3j20_K 71 FMGQAEAARMAIARALVEWTG 91 (135)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC
T ss_pred EechHhHHHHHHHHHHHHhcc
Confidence 345789999999999999973
No 10
>3r8n_I 30S ribosomal protein S9; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_I 3fih_I* 3iy8_I 3j18_I* 2wwl_I 3oar_I 3oaq_I 3ofb_I 3ofa_I 3ofp_I 3ofx_I 3ofy_I 3ofo_I 3r8o_I 4a2i_I 4gd1_I 4gd2_I 2qal_I* 1p6g_I 1p87_I ...
Probab=10.45 E-value=1.3e+02 Score=21.30 Aligned_cols=22 Identities=9% Similarity=0.347 Sum_probs=18.4
Q ss_pred hhhhHHHHHHHHHhhccccccc
Q 037764 86 LRKKSDLLKQSLAKSLTHYYPF 107 (155)
Q Consensus 86 ~~~~~~~Lk~SLs~aL~~yypl 107 (155)
....+..++.++|++|+.|.|-
T Consensus 69 ~~gQa~Air~aIarAL~~~d~~ 90 (127)
T 3r8n_I 69 ISGQAGAIRHGITRALMEYDES 90 (127)
T ss_dssp HHHHHHHHHHHHHTTTTTTCSS
T ss_pred eecHHHHHHHHHHHHHHHHCHH
Confidence 3456899999999999999763
Done!