Query 037764
Match_columns 155
No_of_seqs 149 out of 1059
Neff 6.5
Searched_HMMs 13730
Date Mon Mar 25 06:27:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037764.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/037764hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1f7la_ d.150.1.2 (A:) Holo-(a 12.5 1.4E+02 0.01 18.5 4.4 36 92-129 55-91 (118)
2 d2vqei1 d.14.1.1 (I:2-128) Rib 11.6 48 0.0035 21.7 1.7 21 86-106 69-89 (127)
3 d1ftha_ d.150.1.2 (A:) Holo-(a 11.1 1.5E+02 0.011 18.4 4.1 34 92-128 55-89 (117)
4 d1b77a1 d.131.1.2 (A:1-110) gp 10.6 1.6E+02 0.012 18.5 4.1 38 3-40 9-46 (110)
5 d1txga1 a.100.1.6 (A:181-335) 10.2 34 0.0025 22.9 0.5 14 2-15 8-21 (155)
6 d2rnrb1 b.55.1.9 (B:1-108) TFI 10.0 98 0.0072 19.6 2.8 31 72-105 74-104 (108)
7 d1n1ea1 a.100.1.6 (A:198-357) 9.6 29 0.0021 23.3 -0.1 14 2-15 9-22 (160)
8 d1zq1c3 d.128.1.5 (C:5-276,C:4 8.7 1.1E+02 0.0084 23.0 3.2 22 115-136 172-193 (321)
9 d1vzya1 d.193.1.1 (A:1-233) He 8.2 1.1E+02 0.0081 21.5 2.8 48 91-138 36-88 (233)
10 d1zxoa1 c.55.1.5 (A:3-106) Hyp 8.1 1.1E+02 0.0082 19.0 2.5 21 62-82 47-67 (104)
No 1
>d1f7la_ d.150.1.2 (A:) Holo-(acyl carrier protein) synthase ACPS {Bacillus subtilis [TaxId: 1423]}
Probab=12.50 E-value=1.4e+02 Score=18.47 Aligned_cols=36 Identities=14% Similarity=0.311 Sum_probs=23.8
Q ss_pred HHHHHHHhhcccccccccccC-CceEEEeCCCCeEEEEE
Q 037764 92 LLKQSLAKSLTHYYPFAGRLI-DSFSVDCNDHGAAFIDA 129 (155)
Q Consensus 92 ~Lk~SLs~aL~~yyplAGRL~-~~~~I~cn~~GV~fveA 129 (155)
..|+|+.++|.. .+...+. .+.+|..+..|.+++..
T Consensus 55 AaKEA~~Kalg~--g~~~~~~~~dieI~~~~~G~P~~~~ 91 (118)
T d1f7la_ 55 AAKEAFSKAFGT--GIGRQLSFQDIEIRKDQNGKPYIIC 91 (118)
T ss_dssp HHHHHHHHHHTS--CSBTTBCGGGCEEEECTTSCEEEEE
T ss_pred HHHHHHHHhccc--CCCCCCcccEEEEEECCCCCcEEEe
Confidence 589999999964 2222233 35777777778777654
No 2
>d2vqei1 d.14.1.1 (I:2-128) Ribosomal protein S9 {Thermus thermophilus [TaxId: 274]}
Probab=11.57 E-value=48 Score=21.69 Aligned_cols=21 Identities=29% Similarity=0.521 Sum_probs=18.2
Q ss_pred hhhhHHHHHHHHHhhcccccc
Q 037764 86 LRKKSDLLKQSLAKSLTHYYP 106 (155)
Q Consensus 86 ~~~~~~~Lk~SLs~aL~~yyp 106 (155)
.....+.++.++|++|+.|.|
T Consensus 69 ~~gQa~Air~aIaRaL~~~~~ 89 (127)
T d2vqei1 69 KSGQIDAIKLGIARALVQYNP 89 (127)
T ss_dssp HHHHHHHHHHHHHHHHHHHCG
T ss_pred hhHHHHHHHHHHHHHHHHHCH
Confidence 346789999999999999876
No 3
>d1ftha_ d.150.1.2 (A:) Holo-(acyl carrier protein) synthase ACPS {Streptococcus pneumoniae [TaxId: 1313]}
Probab=11.10 E-value=1.5e+02 Score=18.44 Aligned_cols=34 Identities=21% Similarity=0.317 Sum_probs=25.1
Q ss_pred HHHHHHHhhcccccccccccC-CceEEEeCCCCeEEEE
Q 037764 92 LLKQSLAKSLTHYYPFAGRLI-DSFSVDCNDHGAAFID 128 (155)
Q Consensus 92 ~Lk~SLs~aL~~yyplAGRL~-~~~~I~cn~~GV~fve 128 (155)
..|+|+.++|..- +.| +. .+.+|..+..|.+++.
T Consensus 55 AaKEA~~KAlg~g--~~~-~~~~dIeI~~~~~G~P~~~ 89 (117)
T d1ftha_ 55 SAKEAFSKAMGTG--ISK-LGFQDLEVLNNERGAPYFS 89 (117)
T ss_dssp HHHHHHHHHHTSC--SSS-SCGGGCEEEECTTSCEEEE
T ss_pred HHHHHHHHHhhcC--ccc-cccceEEEEECCCCCEEEE
Confidence 5899999999742 333 43 4688988888998765
No 4
>d1b77a1 d.131.1.2 (A:1-110) gp45 sliding clamp {Bacteriophage RB69 [TaxId: 12353]}
Probab=10.63 E-value=1.6e+02 Score=18.54 Aligned_cols=38 Identities=26% Similarity=0.309 Sum_probs=27.2
Q ss_pred hhhhhhhhhhccceeecceeEEEeccCCCceeeEEEee
Q 037764 3 VILKNIFRITASKLVTNNIQIFTKRSIKTATSDVQIIS 40 (155)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~i~~ 40 (155)
-||||.-.|-++-.+++-..+.+-...+--..+-+|.+
T Consensus 9 ~iLKNFs~IN~sI~~k~Gn~l~TiS~~knilA~a~i~E 46 (110)
T d1b77a1 9 AILKNFASINSGILLSQGKFIMTRAVNGTTYAEANISD 46 (110)
T ss_dssp HHHHHHHTTCSCEEECSEEEEEEECTTSSEEEEEEEEE
T ss_pred HHHHHHHhcCCCeEEcCCCeEEEeecccceEEEEEecc
Confidence 38999999999999999888877655444333344443
No 5
>d1txga1 a.100.1.6 (A:181-335) Glycerol-3-phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=10.19 E-value=34 Score=22.93 Aligned_cols=14 Identities=29% Similarity=0.458 Sum_probs=10.4
Q ss_pred chhhhhhhhhhccc
Q 037764 2 AVILKNIFRITASK 15 (155)
Q Consensus 2 ~~~~~~~~~~~~~~ 15 (155)
+..+|||++|++--
T Consensus 8 ~galKNi~Aia~Gi 21 (155)
T d1txga1 8 TSALKNVYSIAIAW 21 (155)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 34689999988754
No 6
>d2rnrb1 b.55.1.9 (B:1-108) TFIIH basal transcription factor complex p62 subunit (BTF2-p62), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.98 E-value=98 Score=19.57 Aligned_cols=31 Identities=23% Similarity=0.341 Sum_probs=21.0
Q ss_pred cEEEEecCCCcccchhhhHHHHHHHHHhhccccc
Q 037764 72 PLVFFYSTNCKQQDLRKKSDLLKQSLAKSLTHYY 105 (155)
Q Consensus 72 ~~v~fY~~~~~~~~~~~~~~~Lk~SLs~aL~~yy 105 (155)
+.+|-|.+++. .....+.+|+.|++.|..|-
T Consensus 74 s~~F~Ftn~~~---~~~~Rd~iK~~Lq~~i~~~k 104 (108)
T d2rnrb1 74 TTNFHFSNEST---AVKERDAVKDLLQQLLPKFK 104 (108)
T ss_dssp EEEEEECCTTT---HHHHHHHHHHHHHHHHHHHC
T ss_pred eEEEEECChHH---HHHHHHHHHHHHHHHHHHhh
Confidence 46677765432 23446889999999988763
No 7
>d1n1ea1 a.100.1.6 (A:198-357) Glycerol-3-phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}
Probab=9.58 E-value=29 Score=23.33 Aligned_cols=14 Identities=29% Similarity=0.396 Sum_probs=9.8
Q ss_pred chhhhhhhhhhccc
Q 037764 2 AVILKNIFRITASK 15 (155)
Q Consensus 2 ~~~~~~~~~~~~~~ 15 (155)
+-.||||++|++--
T Consensus 9 ~galKNi~Aia~Gi 22 (160)
T d1n1ea1 9 ASAVKNVLAIGSGV 22 (160)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 34688998886543
No 8
>d1zq1c3 d.128.1.5 (C:5-276,C:408-456) Glutamyl-tRNA(Gln) amidotransferase subunit E, GatE {Pyrococcus abyssi [TaxId: 29292]}
Probab=8.70 E-value=1.1e+02 Score=22.97 Aligned_cols=22 Identities=18% Similarity=0.223 Sum_probs=17.2
Q ss_pred eEEEeCCCCeEEEEEEcCCCcc
Q 037764 115 FSVDCNDHGAAFIDANVGCDIS 136 (155)
Q Consensus 115 ~~I~cn~~GV~fveA~~~~~l~ 136 (155)
..+|.|-.|++++|=.+.-++.
T Consensus 172 ~lvD~NRaGvPLiEIVTePd~~ 193 (321)
T d1zq1c3 172 VIYRLDRLGIPLIEISTTPDIH 193 (321)
T ss_dssp EEEESTTTTCEEEEEECCTTBC
T ss_pred eEEeecccCcceEEEecccccc
Confidence 3478899999999988765543
No 9
>d1vzya1 d.193.1.1 (A:1-233) Heat shock protein 33, Hsp33 {Bacillus subtilis [TaxId: 1423]}
Probab=8.23 E-value=1.1e+02 Score=21.50 Aligned_cols=48 Identities=19% Similarity=0.319 Sum_probs=32.8
Q ss_pred HHHHHHHHhhcccccccccccC--Cce--EEEeCCC-CeEEEEEEcCCCcccc
Q 037764 91 DLLKQSLAKSLTHYYPFAGRLI--DSF--SVDCNDH-GAAFIDANVGCDISKF 138 (155)
Q Consensus 91 ~~Lk~SLs~aL~~yyplAGRL~--~~~--~I~cn~~-GV~fveA~~~~~l~dl 138 (155)
......|+++|+.--.|++.++ +++ .+.+++. +-.++|+..+..+--.
T Consensus 36 ~~~~~lLg~~l~a~~LL~~~lK~~g~~tlq~~g~Gpi~~lv~e~~~~g~vRg~ 88 (233)
T d1vzya1 36 PTASAALGRTMTASLMLGAMLKGDDKLTVKIEGGGPIGAIVADANAKGEVRAY 88 (233)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCTTCEEEEEEECSSTTCEEEEEEETTSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCEEEEEEEcCCCcceEEEEecCCCceEEE
Confidence 4457778888888888998888 444 4555553 5667777776655544
No 10
>d1zxoa1 c.55.1.5 (A:3-106) Hypothetical protein BT3618 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=8.12 E-value=1.1e+02 Score=19.04 Aligned_cols=21 Identities=19% Similarity=0.278 Sum_probs=7.3
Q ss_pred cccccccCcccEEEEecCCCc
Q 037764 62 PDQLCSKLYAPLVFFYSTNCK 82 (155)
Q Consensus 62 lD~~~~~~~v~~v~fY~~~~~ 82 (155)
++.....--+..||||-+...
T Consensus 47 ~~~~~~~~~v~~V~FYGAGC~ 67 (104)
T d1zxoa1 47 LLPQLPEGKFNAVYFYGAGCT 67 (104)
T ss_dssp ------------CEEECTTCC
T ss_pred cchhhhhccccEEEEEccCCC
Confidence 333333457889999987654
Done!