Query 037768
Match_columns 111
No_of_seqs 116 out of 1091
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 06:30:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037768.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037768hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wfj_A Putative elicitor-respo 99.9 1.2E-24 4.3E-29 127.0 10.1 102 10-111 28-131 (136)
2 3b7y_A E3 ubiquitin-protein li 99.9 5.8E-23 2E-27 122.1 12.6 101 10-110 38-153 (153)
3 3m7f_B E3 ubiquitin-protein li 99.9 8.1E-23 2.8E-27 124.1 11.9 102 10-111 26-142 (176)
4 2dmh_A Myoferlin; beta-sandwic 99.9 1.7E-22 5.7E-27 118.5 12.9 100 11-111 25-134 (140)
5 3kwu_A MUNC13-1; calcium bindi 99.9 4.5E-22 1.6E-26 117.6 12.9 98 10-110 35-147 (148)
6 2ep6_A MCTP2 protein; beta san 99.9 8E-23 2.7E-27 119.0 8.5 98 10-110 31-132 (133)
7 2fk9_A Protein kinase C, ETA t 99.9 8.6E-22 2.9E-26 117.5 9.5 94 11-109 58-156 (157)
8 1gmi_A Protein kinase C, epsil 99.9 2.4E-21 8.2E-26 113.2 10.6 93 13-110 38-133 (136)
9 2nq3_A Itchy homolog E3 ubiqui 99.9 4.1E-21 1.4E-25 116.4 11.1 99 11-110 55-161 (173)
10 1rlw_A Phospholipase A2, CALB 99.9 1.1E-20 3.8E-25 108.9 11.7 97 10-110 24-125 (126)
11 3pyc_A E3 ubiquitin-protein li 99.8 1.6E-20 5.6E-25 109.0 10.2 98 10-108 23-131 (132)
12 1wfm_A Synaptotagmin XIII; C2 99.8 7E-20 2.4E-24 107.2 9.6 86 10-96 41-134 (138)
13 2b3r_A Phosphatidylinositol-4- 99.8 4.7E-19 1.6E-23 103.2 9.5 84 10-94 37-130 (134)
14 3l9b_A Otoferlin; C2-domain, b 99.8 1.5E-18 5.1E-23 100.9 11.2 101 9-110 33-140 (144)
15 2cjt_A UNC-13 homolog A, MUNC1 99.8 1.5E-19 5.2E-24 105.0 7.0 96 10-108 20-130 (131)
16 2d8k_A Synaptotagmin VII; exoc 99.8 8.7E-19 3E-23 102.8 9.4 87 10-97 44-138 (141)
17 2z0u_A WW domain-containing pr 99.8 1.5E-19 5E-24 107.8 6.0 84 10-93 61-154 (155)
18 2enp_A B/K protein; C2 type 1, 99.8 4.8E-19 1.6E-23 104.5 6.6 86 11-97 52-144 (147)
19 2bwq_A Regulating synaptic mem 99.8 1.2E-18 4.1E-23 100.6 8.1 82 10-93 36-129 (129)
20 3f04_A Synaptotagmin-1; C2A, c 99.8 9.6E-19 3.3E-23 102.8 7.3 83 10-93 52-141 (143)
21 3rdl_A Protein kinase C alpha 99.8 1.2E-18 4.2E-23 101.5 7.7 82 10-93 34-123 (137)
22 2cjs_A UNC-13 homolog A, MUNC1 99.8 4.1E-18 1.4E-22 102.6 10.2 71 10-83 29-101 (167)
23 3fdw_A Synaptotagmin-like prot 99.8 3.6E-19 1.2E-23 105.2 5.5 84 10-94 42-134 (148)
24 3fbk_A RGS3, RGP3, regulator o 99.8 3.6E-19 1.2E-23 105.8 5.1 84 10-93 44-136 (153)
25 1rsy_A Synaptotagmin I; calciu 99.8 2.2E-18 7.4E-23 102.3 8.2 83 10-93 60-149 (152)
26 2r83_A Synaptotagmin-1; C2A-C2 99.8 9.7E-18 3.3E-22 108.1 11.6 100 10-110 37-147 (284)
27 2q3x_A Regulating synaptic mem 99.8 1.2E-18 4.1E-23 105.3 6.8 83 10-93 49-138 (171)
28 1a25_A CALB, protein kinase C 99.8 2.2E-18 7.5E-23 101.9 7.7 82 10-93 49-138 (149)
29 1v27_A Regulating synaptic mem 99.8 7.4E-19 2.5E-23 102.9 5.6 82 10-93 39-132 (141)
30 1dqv_A Synaptotagmin III; beta 99.8 8.1E-18 2.8E-22 109.3 10.3 101 10-110 38-149 (296)
31 1ugk_A Synaptotagmin IV, KIAA1 99.7 6.8E-18 2.3E-22 98.6 8.1 83 11-93 42-132 (138)
32 1rh8_A Piccolo protein; beta-s 99.7 2E-18 6.7E-23 101.3 3.9 84 10-94 36-138 (142)
33 3jzy_A Intersectin 2; C2 domai 99.7 2.8E-17 9.4E-22 113.3 10.1 98 10-109 405-507 (510)
34 2dmg_A KIAA1228 protein; beta- 99.7 7.8E-18 2.7E-22 98.7 6.1 83 10-94 42-135 (142)
35 2chd_A Rabphilin-3A, exophilin 99.7 1.8E-17 6.1E-22 97.2 7.0 83 10-93 47-139 (142)
36 1tjx_A Similar to synaptotagmi 99.7 6.1E-17 2.1E-21 96.6 8.8 84 10-93 43-146 (159)
37 2cm5_A Rabphilin-3A; protein t 99.7 8.4E-17 2.9E-21 96.6 9.0 70 10-79 55-133 (166)
38 3n5a_A Synaptotagmin-7; calciu 99.7 6E-17 2.1E-21 94.3 8.0 70 10-79 34-112 (138)
39 1w15_A Synaptotagmin IV; metal 99.7 2.9E-16 9.9E-21 93.1 9.2 69 10-78 48-125 (153)
40 3nsj_A Perforin-1; pore formin 99.7 3.4E-16 1.2E-20 108.6 10.1 90 9-108 410-502 (540)
41 1djx_A PLC-D1, phosphoinositid 99.6 4.7E-15 1.6E-19 104.6 12.7 96 10-109 517-623 (624)
42 2r83_A Synaptotagmin-1; C2A-C2 99.6 3.7E-15 1.3E-19 96.0 9.2 84 10-93 168-271 (284)
43 1cjy_A CPLA2, protein (cytosol 99.6 1.1E-14 3.6E-19 104.1 10.6 83 10-94 39-126 (749)
44 3bxj_A RAS GTPase-activating p 99.5 3.3E-15 1.1E-19 102.7 0.7 97 14-111 28-158 (483)
45 1dqv_A Synaptotagmin III; beta 99.5 6.1E-15 2.1E-19 95.7 1.6 85 10-94 170-275 (296)
46 3pfq_A PKC-B, PKC-beta, protei 99.4 4E-13 1.4E-17 95.6 5.9 82 10-93 190-279 (674)
47 1yrk_A NPKC-delta, protein kin 99.3 1.2E-11 4E-16 70.2 8.6 91 12-111 26-126 (126)
48 3ohm_B 1-phosphatidylinositol- 99.3 1.2E-11 4E-16 89.9 10.7 91 11-109 740-844 (885)
49 3qr0_A Phospholipase C-beta (P 99.3 3.2E-11 1.1E-15 87.1 12.4 91 11-109 665-770 (816)
50 2zkm_X 1-phosphatidylinositol- 99.3 3E-11 1E-15 87.3 11.5 91 11-109 693-798 (799)
51 2enj_A NPKC-theta, protein kin 99.3 2.7E-11 9.3E-16 69.6 7.3 90 12-110 31-130 (138)
52 2yrb_A Protein fantom; beta sa 96.2 0.061 2.1E-06 31.7 8.1 96 12-108 39-148 (156)
53 3l4c_A Dedicator of cytokinesi 92.6 1.1 3.8E-05 27.8 9.6 54 25-78 78-139 (220)
54 2wxf_A Phosphatidylinositol-4, 85.3 5.1 0.00017 30.3 7.7 67 13-79 235-324 (940)
55 1e7u_A Phosphatidylinositol 3- 84.5 4.3 0.00015 30.8 7.0 67 14-80 239-331 (961)
56 3hhm_A Phosphatidylinositol-4, 71.8 18 0.00061 28.0 7.0 67 13-79 375-455 (1091)
57 2y3a_A Phosphatidylinositol-4, 67.3 15 0.00052 28.4 5.9 34 27-60 391-429 (1092)
58 2kzb_A Autophagy-related prote 26.9 61 0.0021 17.4 2.5 40 36-78 7-46 (118)
No 1
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.92 E-value=1.2e-24 Score=127.03 Aligned_cols=102 Identities=61% Similarity=1.015 Sum_probs=91.3
Q ss_pred cCCCCcEEEEEECCeEEEeeeeC-C-CCCcccceEEEEEcCCCceEEEEEEeCCCCCCCceeEEEEEECcccccCCCCCC
Q 037768 10 AGSVDPYVVLTCRTQEQKSSIGS-G-SGPEWNETFVFTITGDVTELTLKIMDKDTFSNDDYLGEATISLEPLFMEGSLPP 87 (111)
Q Consensus 10 ~~~~dp~v~v~~~~~~~~T~~~~-~-~~P~w~e~~~f~~~~~~~~l~i~v~~~~~~~~~~~lG~~~~~l~~l~~~~~~~~ 87 (111)
.+.+||||++.+....++|++++ + .+|.|+|+|.|.+......|.|+|||++..+++++||++.+++.++...+....
T Consensus 28 ~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~l~~~V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~ 107 (136)
T 1wfj_A 28 LNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDVGTEDDAVGEATIPLEPVFVEGSIPP 107 (136)
T ss_dssp SCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCSSSCTTTCCSEEEEEESHHHHHHSEEEE
T ss_pred CCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECCCCCEEEEEEEECCCCCCCceEEEEEEEHHHhccCCCCCc
Confidence 46799999999998889999998 7 999999999999987667999999999998899999999999999954455567
Q ss_pred eEEEeccCCeEeeEEEEEEEEEeC
Q 037768 88 TAYNVVKNQEYCGEIRVGLTFTPE 111 (111)
Q Consensus 88 ~~~~l~~~~~~~G~l~l~~~~~~~ 111 (111)
.|++|.......|+|+|+++|.|.
T Consensus 108 ~w~~L~~~~~~~G~i~l~l~~~p~ 131 (136)
T 1wfj_A 108 TAYNVVKDEEYKGEIWVALSFKPS 131 (136)
T ss_dssp EEEEEEETTEEEEEEEEEEEEEEC
T ss_pred EEEEeecCCccCEEEEEEEEEEeC
Confidence 899998777889999999999884
No 2
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.90 E-value=5.8e-23 Score=122.10 Aligned_cols=101 Identities=25% Similarity=0.498 Sum_probs=84.6
Q ss_pred cCCCCcEEEEEECC------eEEEeeeeCC-CCCcccceEEEEEcCCCceEEEEEEeCCCCCCCceeEEEEEECcccccC
Q 037768 10 AGSVDPYVVLTCRT------QEQKSSIGSG-SGPEWNETFVFTITGDVTELTLKIMDKDTFSNDDYLGEATISLEPLFME 82 (111)
Q Consensus 10 ~~~~dp~v~v~~~~------~~~~T~~~~~-~~P~w~e~~~f~~~~~~~~l~i~v~~~~~~~~~~~lG~~~~~l~~l~~~ 82 (111)
.|.+||||++.+.. ..++|+++++ .||.|+|+|.|.+......|.|+|||++..+++++||++.+++.++..+
T Consensus 38 ~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~l~~~V~d~d~~~~d~~iG~~~i~l~~l~~~ 117 (153)
T 3b7y_A 38 LGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQQHRLLFEVFDENRLTRDDFLGQVDVPLYPLPTE 117 (153)
T ss_dssp ---CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTTTCEEEEEEEECCSSSCCEEEEEEEEECCSCCBC
T ss_pred CCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCCCCEEEEEEEECCCCcCCCeeEEEEEEHHHcccC
Confidence 47899999999852 4679999999 9999999999999877779999999999998999999999999999755
Q ss_pred CCC-----CCeEEEecc---CCeEeeEEEEEEEEEe
Q 037768 83 GSL-----PPTAYNVVK---NQEYCGEIRVGLTFTP 110 (111)
Q Consensus 83 ~~~-----~~~~~~l~~---~~~~~G~l~l~~~~~~ 110 (111)
... ...|++|.. .....|+|+++++|.|
T Consensus 118 ~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 118 NPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLP 153 (153)
T ss_dssp CTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEECC
T ss_pred CCcccccccccccccccccCCCCcceEEEEEEEEeC
Confidence 432 258999972 3456899999999987
No 3
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.90 E-value=8.1e-23 Score=124.08 Aligned_cols=102 Identities=24% Similarity=0.492 Sum_probs=82.1
Q ss_pred cCCCCcEEEEEECC------eEEEeeeeCC-CCCcccceEEEEEcCCCceEEEEEEeCCCCCCCceeEEEEEECcccccC
Q 037768 10 AGSVDPYVVLTCRT------QEQKSSIGSG-SGPEWNETFVFTITGDVTELTLKIMDKDTFSNDDYLGEATISLEPLFME 82 (111)
Q Consensus 10 ~~~~dp~v~v~~~~------~~~~T~~~~~-~~P~w~e~~~f~~~~~~~~l~i~v~~~~~~~~~~~lG~~~~~l~~l~~~ 82 (111)
.|.+||||++.+.. ..++|+++++ .||.|+|+|.|.+......|.|+|||++..+++++||++.++|.++...
T Consensus 26 ~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~L~~~V~d~d~~~~d~~lG~~~i~l~~l~~~ 105 (176)
T 3m7f_B 26 LGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQRHRILFEVFDENRLTRDDFLGQVDVPLYPLPTE 105 (176)
T ss_dssp CCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTTTCEEEEEEEECC----CEEEEEEEEESCSCCBC
T ss_pred CCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCCCCEEEEEEEECCCCCCCcEEEEEEEEHHHcccc
Confidence 57899999999854 5679999999 9999999999999877779999999999998899999999999999765
Q ss_pred CCC-----CCeEEEec---cCCeEeeEEEEEEEEEeC
Q 037768 83 GSL-----PPTAYNVV---KNQEYCGEIRVGLTFTPE 111 (111)
Q Consensus 83 ~~~-----~~~~~~l~---~~~~~~G~l~l~~~~~~~ 111 (111)
... ...||+|. ...+..|+|+|+++|.|.
T Consensus 106 ~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 106 NPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp ------CCCCEEEECBCSSTTCCCCSEEEEEEEECC-
T ss_pred CCcccccccccEEEccccCCCCccCEEEEEEEEEEeC
Confidence 432 23899998 334568999999999884
No 4
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.90 E-value=1.7e-22 Score=118.50 Aligned_cols=100 Identities=25% Similarity=0.464 Sum_probs=85.9
Q ss_pred CCCCcEEEEEECCeEEEeeeeCC-CCCcccceEEEEEcCC----CceEEEEEEeCCCCCCCceeEEEEEECcccccCCCC
Q 037768 11 GSVDPYVVLTCRTQEQKSSIGSG-SGPEWNETFVFTITGD----VTELTLKIMDKDTFSNDDYLGEATISLEPLFMEGSL 85 (111)
Q Consensus 11 ~~~dp~v~v~~~~~~~~T~~~~~-~~P~w~e~~~f~~~~~----~~~l~i~v~~~~~~~~~~~lG~~~~~l~~l~~~~~~ 85 (111)
+.+||||++.+....++|+++++ .||.|+|+|.|.+... ...|.|+|||++..+++++||++.+++.++..+..
T Consensus 25 g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~- 103 (140)
T 2dmh_A 25 GKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFETIGQNKLIGTATVALKDLTGDQS- 103 (140)
T ss_dssp SCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTCSSSCCCCEEEEEEGGGTCSSSC-
T ss_pred CCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCCCCCCceEEEEEEEHHHhccCCC-
Confidence 67999999999988899999999 9999999999998752 45899999999999889999999999999975443
Q ss_pred CCeEEE---ec--cCCeEeeEEEEEEEEEeC
Q 037768 86 PPTAYN---VV--KNQEYCGEIRVGLTFTPE 111 (111)
Q Consensus 86 ~~~~~~---l~--~~~~~~G~l~l~~~~~~~ 111 (111)
...|++ |. ......|+|+++++|.|.
T Consensus 104 ~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p~ 134 (140)
T 2dmh_A 104 RSLPYKLISLLNEKGQDTGATIDLVIGYDPP 134 (140)
T ss_dssp EEEEEEEEEEECTTCCEEEEEEEEEEEECCC
T ss_pred ceeEEeeeeccCCCCCCCCCEEEEEEEEECC
Confidence 468988 54 234567999999999873
No 5
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.89 E-value=4.5e-22 Score=117.64 Aligned_cols=98 Identities=27% Similarity=0.512 Sum_probs=85.3
Q ss_pred cCCCCcEEEEEECCeEEEeeeeCC-CCCcccceEEEEEcCCCceEEEEEEeCCCC-----------CCCceeEEEEEECc
Q 037768 10 AGSVDPYVVLTCRTQEQKSSIGSG-SGPEWNETFVFTITGDVTELTLKIMDKDTF-----------SNDDYLGEATISLE 77 (111)
Q Consensus 10 ~~~~dp~v~v~~~~~~~~T~~~~~-~~P~w~e~~~f~~~~~~~~l~i~v~~~~~~-----------~~~~~lG~~~~~l~ 77 (111)
.|.+||||++.+++..++|+++++ .||.|+|+|.|.+..+...|.|+|||++.. +++++||++.+++.
T Consensus 35 ~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~l~~~v~d~d~~~~~~~~~~~~~~~~~~lG~~~i~l~ 114 (148)
T 3kwu_A 35 TGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNSSDRIKVRVLDEDDDIKSRVKQRFKRESDDFLGQTIIEVR 114 (148)
T ss_dssp TSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECSTTCEEEEEEEECCCSHHHHHHTTTSSCSSEEEEEEEEEGG
T ss_pred CCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCCCCEEEEEEEECCCCccccccccccCCCCccEEEEEEEHH
Confidence 567999999999999999999999 999999999999987778999999999975 78999999999999
Q ss_pred ccccCCCCCCeEEEecc---CCeEeeEEEEEEEEEe
Q 037768 78 PLFMEGSLPPTAYNVVK---NQEYCGEIRVGLTFTP 110 (111)
Q Consensus 78 ~l~~~~~~~~~~~~l~~---~~~~~G~l~l~~~~~~ 110 (111)
++. .....|++|.. .....|+|+|+++|.-
T Consensus 115 ~l~---~~~~~w~~L~~~~~~~~~~G~i~l~l~~e~ 147 (148)
T 3kwu_A 115 TLS---GEMDVWYNLDKRTDKSAVSGAIRLHISVEI 147 (148)
T ss_dssp GCC---SEEEEEEECBCSSTTCCCCCEEEEEEEEEC
T ss_pred HCc---CCCCEEEEcccCCCCCCCceEEEEEEEEEe
Confidence 983 22478999982 2346799999999863
No 6
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.89 E-value=8e-23 Score=118.99 Aligned_cols=98 Identities=24% Similarity=0.446 Sum_probs=86.3
Q ss_pred cCCCCcEEEEEECCeEEEeeeeCC-CCCcccceEEEEEcCCCceEEEEEEeCCCCCCCceeEEEEEECcccccCCCCCCe
Q 037768 10 AGSVDPYVVLTCRTQEQKSSIGSG-SGPEWNETFVFTITGDVTELTLKIMDKDTFSNDDYLGEATISLEPLFMEGSLPPT 88 (111)
Q Consensus 10 ~~~~dp~v~v~~~~~~~~T~~~~~-~~P~w~e~~~f~~~~~~~~l~i~v~~~~~~~~~~~lG~~~~~l~~l~~~~~~~~~ 88 (111)
.|.+||||++.+++..++|+++++ .||.|+|+|.|.+......|.|+|||++..+++++||++.+++.++..+ ...
T Consensus 31 ~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~---~~~ 107 (133)
T 2ep6_A 31 SGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDIHDVLEVTVFDEDGDKPPDFLGKVAIPLLSIRDG---QPN 107 (133)
T ss_dssp SSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCTTCEEEEEEEEEETTEEEEECCBCEEEGGGCCSS---CCE
T ss_pred CCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCCCCEEEEEEEECCCCCCCCeeEEEEEEHHHccCC---Cce
Confidence 477999999999999999999999 9999999999999877778999999999988899999999999998642 358
Q ss_pred EEEecc---CCeEeeEEEEEEEEEe
Q 037768 89 AYNVVK---NQEYCGEIRVGLTFTP 110 (111)
Q Consensus 89 ~~~l~~---~~~~~G~l~l~~~~~~ 110 (111)
|++|.. .....|+|+|+++|..
T Consensus 108 w~~L~~~~~~~~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 108 CYVLKNKDLEQAFKGVIYLEMDLIY 132 (133)
T ss_dssp ECCCBCSCTTSCCSSEEEEEEEEEE
T ss_pred EEEeecCCCCCccceEEEEEEEEEe
Confidence 999972 2457899999999874
No 7
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.87 E-value=8.6e-22 Score=117.52 Aligned_cols=94 Identities=19% Similarity=0.345 Sum_probs=81.0
Q ss_pred CCCCcEEEEEECCeE-EEeeeeCC-CCCcccceEEEEEcCCCceEEEEEEeCCCCCCCceeEEEEEECcccccC---CCC
Q 037768 11 GSVDPYVVLTCRTQE-QKSSIGSG-SGPEWNETFVFTITGDVTELTLKIMDKDTFSNDDYLGEATISLEPLFME---GSL 85 (111)
Q Consensus 11 ~~~dp~v~v~~~~~~-~~T~~~~~-~~P~w~e~~~f~~~~~~~~l~i~v~~~~~~~~~~~lG~~~~~l~~l~~~---~~~ 85 (111)
|.+||||++.+++.. .+|+++++ .||.|||+|.|.+.. ...|.|+|||++.++++++||++.++++++..+ +..
T Consensus 58 g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~-~~~L~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~ 136 (157)
T 2fk9_A 58 QLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTD-GGHLELAVFHETPLGYDHFVANCTLQFQELLRTTGASDT 136 (157)
T ss_dssp CCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEE-ECEEEEEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSE
T ss_pred CCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCC-CCEEEEEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCc
Confidence 568999999998766 58999999 999999999999874 458999999999999999999999999999754 234
Q ss_pred CCeEEEeccCCeEeeEEEEEEEEE
Q 037768 86 PPTAYNVVKNQEYCGEIRVGLTFT 109 (111)
Q Consensus 86 ~~~~~~l~~~~~~~G~l~l~~~~~ 109 (111)
...|++|.. +|.|+|.++|.
T Consensus 137 ~~~W~~L~~----~G~i~l~l~~~ 156 (157)
T 2fk9_A 137 FEGWVDLEP----EGKVFVVITLT 156 (157)
T ss_dssp EEEEEECBS----SCEEEEEEEEC
T ss_pred ccEEEECCC----CcEEEEEEEEE
Confidence 579999964 79999998874
No 8
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.87 E-value=2.4e-21 Score=113.18 Aligned_cols=93 Identities=20% Similarity=0.455 Sum_probs=80.4
Q ss_pred CCcEEEEEECCeE-EEeeeeCC-CCCcccceEEEEEcCCCceEEEEEEeCCCCCCCceeEEEEEECcccccCCC-CCCeE
Q 037768 13 VDPYVVLTCRTQE-QKSSIGSG-SGPEWNETFVFTITGDVTELTLKIMDKDTFSNDDYLGEATISLEPLFMEGS-LPPTA 89 (111)
Q Consensus 13 ~dp~v~v~~~~~~-~~T~~~~~-~~P~w~e~~~f~~~~~~~~l~i~v~~~~~~~~~~~lG~~~~~l~~l~~~~~-~~~~~ 89 (111)
+||||++.+++.. .+|++.++ .||.|||+|.|.+... ..|.|+|||++..+++++||++.+++.++..++. ....|
T Consensus 38 ~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~-~~L~~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w 116 (136)
T 1gmi_A 38 LDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG-RKIELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDW 116 (136)
T ss_dssp CCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE-CEEEEEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEE
T ss_pred cCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC-CEEEEEEEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEE
Confidence 8999999997765 58888888 9999999999998754 7899999999999999999999999999976433 23789
Q ss_pred EEeccCCeEeeEEEEEEEEEe
Q 037768 90 YNVVKNQEYCGEIRVGLTFTP 110 (111)
Q Consensus 90 ~~l~~~~~~~G~l~l~~~~~~ 110 (111)
++|.. .|+|+|.++|.+
T Consensus 117 ~~L~~----~G~i~l~l~~~~ 133 (136)
T 1gmi_A 117 IDLEP----EGKVYVIIDLSG 133 (136)
T ss_dssp EECBS----SCEEEEEEEEEE
T ss_pred EEcCC----CeEEEEEEEEEe
Confidence 98863 699999999975
No 9
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.86 E-value=4.1e-21 Score=116.38 Aligned_cols=99 Identities=19% Similarity=0.358 Sum_probs=84.3
Q ss_pred CCCCcEEEEEECCeEEEeeeeCC-CCCcccceEEEEEcCCCceEEEEEEeCCCCCCCceeEEEEEECcccccCCCC--C-
Q 037768 11 GSVDPYVVLTCRTQEQKSSIGSG-SGPEWNETFVFTITGDVTELTLKIMDKDTFSNDDYLGEATISLEPLFMEGSL--P- 86 (111)
Q Consensus 11 ~~~dp~v~v~~~~~~~~T~~~~~-~~P~w~e~~~f~~~~~~~~l~i~v~~~~~~~~~~~lG~~~~~l~~l~~~~~~--~- 86 (111)
+.+||||++.+++..++|+++++ +||.|+|+|.|.+. +...|.|+|||++..+++++||++.+++.++...... .
T Consensus 55 ~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~-~~~~L~~~V~D~d~~~~dd~lG~~~i~l~~l~~~~~~~~~~ 133 (173)
T 2nq3_A 55 FGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVT-PVSKLHFRVWSHQTLKSDVLLGTAALDIYETLKSNNMKLEE 133 (173)
T ss_dssp CCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEEC-TTCEEEEEEEECCSSSCCEEEEEEEEEHHHHHHHTTTEESS
T ss_pred CCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeC-CCCEEEEEEEECCCCCCCceEEEEEEEHHHhcccCCCCcce
Confidence 45899999999888899999999 99999999999986 4679999999999998899999999999998643321 2
Q ss_pred -CeEEEecc---CCeEeeEEEEEEEEEe
Q 037768 87 -PTAYNVVK---NQEYCGEIRVGLTFTP 110 (111)
Q Consensus 87 -~~~~~l~~---~~~~~G~l~l~~~~~~ 110 (111)
..|++|.. .....|+|.+.++|.+
T Consensus 134 ~~~~~~L~~~~~~~~~~G~L~v~l~~l~ 161 (173)
T 2nq3_A 134 VVVTLQLGGDKEPTETIGDLSICLDGLQ 161 (173)
T ss_dssp EEEEEEEEESSCTTSEEEEEEEEEESEE
T ss_pred eEEEEECccCCCCCcccEEEEEEEeeee
Confidence 56999983 3457899999999875
No 10
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.86 E-value=1.1e-20 Score=108.86 Aligned_cols=97 Identities=24% Similarity=0.378 Sum_probs=81.2
Q ss_pred cCCCCcEEEEEECC---eEEEeeeeCC-CCCcccceEEEEEcC-CCceEEEEEEeCCCCCCCceeEEEEEECcccccCCC
Q 037768 10 AGSVDPYVVLTCRT---QEQKSSIGSG-SGPEWNETFVFTITG-DVTELTLKIMDKDTFSNDDYLGEATISLEPLFMEGS 84 (111)
Q Consensus 10 ~~~~dp~v~v~~~~---~~~~T~~~~~-~~P~w~e~~~f~~~~-~~~~l~i~v~~~~~~~~~~~lG~~~~~l~~l~~~~~ 84 (111)
.|.+||||++.++. ..++|+++++ .||.|+|+|.|.+.. ....|.|+|||++..+ +++||++.+++.++.. +.
T Consensus 24 ~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~~~-~~~iG~~~i~l~~l~~-~~ 101 (126)
T 1rlw_A 24 LDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANYVM-DETLGTATFTVSSMKV-GE 101 (126)
T ss_dssp HCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCSSC-CEEEEEEEEEGGGSCT-TC
T ss_pred CCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCCCC-CceeEEEEEEHHHccC-CC
Confidence 47899999999974 6789999999 999999999999965 4458999999999875 9999999999999974 34
Q ss_pred CCCeEEEeccCCeEeeEEEEEEEEEe
Q 037768 85 LPPTAYNVVKNQEYCGEIRVGLTFTP 110 (111)
Q Consensus 85 ~~~~~~~l~~~~~~~G~l~l~~~~~~ 110 (111)
....|++|.. ...|.|+++++-.|
T Consensus 102 ~~~~~~~L~~--~~~g~i~~~le~~~ 125 (126)
T 1rlw_A 102 KKEVPFIFNQ--VTEMVLEMSLEVAS 125 (126)
T ss_dssp EEEEEEEETT--TEEEEEEEEEECCC
T ss_pred cEEEEEEcCC--CceEEEEEEEEeCC
Confidence 4578999975 34688888877655
No 11
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.85 E-value=1.6e-20 Score=109.04 Aligned_cols=98 Identities=14% Similarity=0.239 Sum_probs=80.0
Q ss_pred cCCCCcEEEEEECC--eEEEeeeeCC-CCCcccceEEEEEcCCCceEEEEEEeCCCCCC---CceeEEEEEECcccccCC
Q 037768 10 AGSVDPYVVLTCRT--QEQKSSIGSG-SGPEWNETFVFTITGDVTELTLKIMDKDTFSN---DDYLGEATISLEPLFMEG 83 (111)
Q Consensus 10 ~~~~dp~v~v~~~~--~~~~T~~~~~-~~P~w~e~~~f~~~~~~~~l~i~v~~~~~~~~---~~~lG~~~~~l~~l~~~~ 83 (111)
.|.+||||++.+.. ..++|+++++ +||.|+|+|.|.+.... .|.|+|||++..++ +++||++.++++++....
T Consensus 23 ~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-~l~~~v~d~d~~~~~~~d~~lG~~~i~l~~l~~~~ 101 (132)
T 3pyc_A 23 FRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTD-SITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLK 101 (132)
T ss_dssp TCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETTC-CEEEEEEEGGGTTSSTTTTEEEEEEECHHHHHHHT
T ss_pred CCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCCC-EEEEEEEECCCCCCCCCCCceEEEEEeHHHhhccc
Confidence 56789999999964 6789999999 99999999999987654 59999999998776 799999999999884344
Q ss_pred CCCCeEEEeccC-----CeEeeEEEEEEEE
Q 037768 84 SLPPTAYNVVKN-----QEYCGEIRVGLTF 108 (111)
Q Consensus 84 ~~~~~~~~l~~~-----~~~~G~l~l~~~~ 108 (111)
.....|++|... ....|+|.+++++
T Consensus 102 ~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 102 DTGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp TSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred ccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 434688998721 2348999999875
No 12
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.83 E-value=7e-20 Score=107.22 Aligned_cols=86 Identities=20% Similarity=0.276 Sum_probs=72.6
Q ss_pred cCCCCcEEEEEEC---C-eEEEeeeeCC-CCCcccceEEEEEcCC---CceEEEEEEeCCCCCCCceeEEEEEECccccc
Q 037768 10 AGSVDPYVVLTCR---T-QEQKSSIGSG-SGPEWNETFVFTITGD---VTELTLKIMDKDTFSNDDYLGEATISLEPLFM 81 (111)
Q Consensus 10 ~~~~dp~v~v~~~---~-~~~~T~~~~~-~~P~w~e~~~f~~~~~---~~~l~i~v~~~~~~~~~~~lG~~~~~l~~l~~ 81 (111)
.|.+||||++.+. + ..++|+++++ +||.|+|+|.|.+... ...|.|+|||++..+++++||++.+++.++..
T Consensus 41 ~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d~~~~dd~lG~~~i~l~~l~~ 120 (138)
T 1wfm_A 41 DGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDRFSRHSVAGELRLGLDGTSV 120 (138)
T ss_dssp SSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECCSSCTTSCSEEEEEESSSSSS
T ss_pred CCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEECCCCCCCcEEEEEEEEcccccC
Confidence 5789999999983 2 2478999999 9999999999998763 35899999999999999999999999999864
Q ss_pred CCCCCCeEEEeccCC
Q 037768 82 EGSLPPTAYNVVKNQ 96 (111)
Q Consensus 82 ~~~~~~~~~~l~~~~ 96 (111)
+ .....|++|....
T Consensus 121 ~-~~~~~W~~L~~~~ 134 (138)
T 1wfm_A 121 P-LGAAQWGELKTSG 134 (138)
T ss_dssp C-TTCCEEEECCCCS
T ss_pred c-ccccceeeCcCCC
Confidence 3 3468999998543
No 13
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.80 E-value=4.7e-19 Score=103.22 Aligned_cols=84 Identities=21% Similarity=0.427 Sum_probs=71.7
Q ss_pred cCCCCcEEEEEE-----CCeEEEeeeeCC-CCCcccceEEEE-EcC---CCceEEEEEEeCCCCCCCceeEEEEEECccc
Q 037768 10 AGSVDPYVVLTC-----RTQEQKSSIGSG-SGPEWNETFVFT-ITG---DVTELTLKIMDKDTFSNDDYLGEATISLEPL 79 (111)
Q Consensus 10 ~~~~dp~v~v~~-----~~~~~~T~~~~~-~~P~w~e~~~f~-~~~---~~~~l~i~v~~~~~~~~~~~lG~~~~~l~~l 79 (111)
.+.+||||++.+ ....++|+++++ .||.|+|+|.|. +.. ....|.|+|||++..+++++||++.+++.++
T Consensus 37 ~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d~d~~~~~~~lG~~~i~l~~l 116 (134)
T 2b3r_A 37 GADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLSAESLRENFFLGGITLPLKDF 116 (134)
T ss_dssp SCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGS
T ss_pred CCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEEECCCCCCCcEEEEEEEEhhhc
Confidence 467899999998 345689999999 999999999999 764 3468999999999998999999999999999
Q ss_pred ccCCCCCCeEEEecc
Q 037768 80 FMEGSLPPTAYNVVK 94 (111)
Q Consensus 80 ~~~~~~~~~~~~l~~ 94 (111)
..+. ....|++|..
T Consensus 117 ~~~~-~~~~W~~L~~ 130 (134)
T 2b3r_A 117 NLSK-ETVKWYQLTA 130 (134)
T ss_dssp CTTS-CEEEEEECBC
T ss_pred cCCC-CcceeEECCC
Confidence 7544 3579999973
No 14
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.80 E-value=1.5e-18 Score=100.90 Aligned_cols=101 Identities=16% Similarity=0.270 Sum_probs=85.6
Q ss_pred ecCCCCcEEEEEECCeEEEeeeeC-C-CCCcccceEEEEEcC---CCceEEEEEEeCCCCCCCceeEEEEEECcccccCC
Q 037768 9 LAGSVDPYVVLTCRTQEQKSSIGS-G-SGPEWNETFVFTITG---DVTELTLKIMDKDTFSNDDYLGEATISLEPLFMEG 83 (111)
Q Consensus 9 ~~~~~dp~v~v~~~~~~~~T~~~~-~-~~P~w~e~~~f~~~~---~~~~l~i~v~~~~~~~~~~~lG~~~~~l~~l~~~~ 83 (111)
+.+++|||+++.+.+.+++|++++ + .+|.|||.|.|++.. ....|.+.|+|.++++++++||++.++|.++..++
T Consensus 33 Lpg~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v~~nrlIG~~~i~Lq~lv~~~ 112 (144)
T 3l9b_A 33 LRGRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKVFSNKLIGTFRMVLQKVVEEN 112 (144)
T ss_dssp CCSCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTTSCCEEEEEEEEESHHHHHHS
T ss_pred CCCCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccccCCCEEEEEEEEhHHhccCC
Confidence 357799999999999999999998 6 999999999999876 24489999999999999999999999999998766
Q ss_pred CCCCeEEEec--cCCeEeeEEEEEEEEEe
Q 037768 84 SLPPTAYNVV--KNQEYCGEIRVGLTFTP 110 (111)
Q Consensus 84 ~~~~~~~~l~--~~~~~~G~l~l~~~~~~ 110 (111)
.. ..+-+|. +.....++|.++++|.|
T Consensus 113 ~l-~l~~~LvD~n~~~~~a~I~l~l~Y~p 140 (144)
T 3l9b_A 113 RV-EVSDTLIDDNNAIIKTSLSMEVRYQA 140 (144)
T ss_dssp EE-EEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred eE-EEeecccCCCCCccccEEEEEEEecC
Confidence 43 3445565 34445689999999987
No 15
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.80 E-value=1.5e-19 Score=105.02 Aligned_cols=96 Identities=26% Similarity=0.409 Sum_probs=69.0
Q ss_pred cCCCCcEEEEEECCeEEEeeeeC-C-CCCcccceEEEEEcCCCceEEEEEEeCCCCCCCceeEEEEEECcccccCC-CCC
Q 037768 10 AGSVDPYVVLTCRTQEQKSSIGS-G-SGPEWNETFVFTITGDVTELTLKIMDKDTFSNDDYLGEATISLEPLFMEG-SLP 86 (111)
Q Consensus 10 ~~~~dp~v~v~~~~~~~~T~~~~-~-~~P~w~e~~~f~~~~~~~~l~i~v~~~~~~~~~~~lG~~~~~l~~l~~~~-~~~ 86 (111)
.|.+||||++. ....+|++++ + .||.|||+|.|.+......|.|+|||++ .+++++||++.+++.++...+ ...
T Consensus 20 ~g~~DPYv~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~dd~iG~~~i~l~~l~~~~~~~~ 96 (131)
T 2cjt_A 20 QEKFNTYVTLK--VQNVKSTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIWDTMVGTVWIPLRTIRQSNEEGP 96 (131)
T ss_dssp GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEEECCCSSEEEEEEEECC-SSCEEEEEEEEEEGGGSCBCSSCCC
T ss_pred CCCcCeEEEEE--ecCEEEeEecCCCCCceECCEEEEEEeCCCCeEEEEEEECC-CCCCCeEEEEEEEHHHhhhcCCCCc
Confidence 46789999999 2334555554 5 9999999999999876678999999999 888999999999999986443 222
Q ss_pred CeEEEec-----cCCeEeeE-------EEEEEEE
Q 037768 87 PTAYNVV-----KNQEYCGE-------IRVGLTF 108 (111)
Q Consensus 87 ~~~~~l~-----~~~~~~G~-------l~l~~~~ 108 (111)
..|.++. .+++..|+ +.+.+.|
T Consensus 97 ~~~~~~~~~~~~~~g~~~G~~~p~~~~~~~~~~~ 130 (131)
T 2cjt_A 97 GEWLTLDSQAIMADSEICGTKDPTFHRILLDAHF 130 (131)
T ss_dssp CEEEECBC----------CCSCCCCCEEEEEEEE
T ss_pred cccEEcccccccCCCcCcceECCCccEEEEEEEe
Confidence 2455443 33444454 7777766
No 16
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.79 E-value=8.7e-19 Score=102.77 Aligned_cols=87 Identities=25% Similarity=0.428 Sum_probs=72.6
Q ss_pred cCCCCcEEEEEEC---CeEEEeeeeCC-CCCcccceEEEEEcC----CCceEEEEEEeCCCCCCCceeEEEEEECccccc
Q 037768 10 AGSVDPYVVLTCR---TQEQKSSIGSG-SGPEWNETFVFTITG----DVTELTLKIMDKDTFSNDDYLGEATISLEPLFM 81 (111)
Q Consensus 10 ~~~~dp~v~v~~~---~~~~~T~~~~~-~~P~w~e~~~f~~~~----~~~~l~i~v~~~~~~~~~~~lG~~~~~l~~l~~ 81 (111)
.+.+||||++.+. ...++|+++++ .||.|+|+|.|.+.. ....|.|+|||++..+++++||++.+++.++..
T Consensus 44 ~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~l~~ 123 (141)
T 2d8k_A 44 SGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYDRFSRNDPIGEVSIPLNKVDL 123 (141)
T ss_dssp SSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEECCSSSSCEEEEEEEEETTTSCT
T ss_pred CCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEECCCCCCCcEEEEEEEEhhhhcC
Confidence 5678999999983 45689999999 999999999998533 246899999999998889999999999999975
Q ss_pred CCCCCCeEEEeccCCe
Q 037768 82 EGSLPPTAYNVVKNQE 97 (111)
Q Consensus 82 ~~~~~~~~~~l~~~~~ 97 (111)
+. ....|++|.....
T Consensus 124 ~~-~~~~W~~L~~~~~ 138 (141)
T 2d8k_A 124 TQ-MQTFWKDLKPSGP 138 (141)
T ss_dssp TS-CEEEEECCEECCC
T ss_pred CC-CccEEEECcCCCC
Confidence 44 4578999985443
No 17
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.79 E-value=1.5e-19 Score=107.81 Aligned_cols=84 Identities=17% Similarity=0.196 Sum_probs=72.0
Q ss_pred cCCCCcEEEEEECC---e---EEEeeeeCC-CCCcccceEEEEEcCC---CceEEEEEEeCCCCCCCceeEEEEEECccc
Q 037768 10 AGSVDPYVVLTCRT---Q---EQKSSIGSG-SGPEWNETFVFTITGD---VTELTLKIMDKDTFSNDDYLGEATISLEPL 79 (111)
Q Consensus 10 ~~~~dp~v~v~~~~---~---~~~T~~~~~-~~P~w~e~~~f~~~~~---~~~l~i~v~~~~~~~~~~~lG~~~~~l~~l 79 (111)
.|.+||||++.+.. . .++|+++++ +||.|||+|.|.+... ...|.|+|||++..+++++||++.+++.++
T Consensus 61 ~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V~d~d~~~~~d~iG~~~i~l~~l 140 (155)
T 2z0u_A 61 QQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVCTTDRSHLEECLGGAQISLAEV 140 (155)
T ss_dssp SCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEEEEECTTSCEEEEEEEEEECTTS
T ss_pred CCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEEEECCCCCCCcEEEEEEEEHHHc
Confidence 57899999999854 2 589999999 9999999999998752 458999999999999999999999999999
Q ss_pred ccCCCCCCeEEEec
Q 037768 80 FMEGSLPPTAYNVV 93 (111)
Q Consensus 80 ~~~~~~~~~~~~l~ 93 (111)
...+.....||+|.
T Consensus 141 ~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 141 CRSGERSTRWYNLL 154 (155)
T ss_dssp CTTCCCEEEEEEEB
T ss_pred cCCCCccccceEcc
Confidence 64445568999985
No 18
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.78 E-value=4.8e-19 Score=104.53 Aligned_cols=86 Identities=17% Similarity=0.271 Sum_probs=71.4
Q ss_pred CCCCcEEEEEEC---CeEEEeeeeCC-CCCcccceEEEEEcCC---CceEEEEEEeCCCCCCCceeEEEEEECcccccCC
Q 037768 11 GSVDPYVVLTCR---TQEQKSSIGSG-SGPEWNETFVFTITGD---VTELTLKIMDKDTFSNDDYLGEATISLEPLFMEG 83 (111)
Q Consensus 11 ~~~dp~v~v~~~---~~~~~T~~~~~-~~P~w~e~~~f~~~~~---~~~l~i~v~~~~~~~~~~~lG~~~~~l~~l~~~~ 83 (111)
+.+||||++.+. ...++|+++++ .||.|+|+|.|.+... ...|.|+|||++..+++++||++.+++.++....
T Consensus 52 ~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~ 131 (147)
T 2enp_A 52 AHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLLTVVDFDKFSRHCVIGKVSVPLCEVDLVK 131 (147)
T ss_dssp CCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEEEEEECCSTTCCSCCCEEEEEETTTSCTTT
T ss_pred CCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCEEEEEEEECCCCcCCcEEEEEEEechhcCCCC
Confidence 578999999985 34679999999 9999999999987652 3489999999999989999999999999997544
Q ss_pred CCCCeEEEeccCCe
Q 037768 84 SLPPTAYNVVKNQE 97 (111)
Q Consensus 84 ~~~~~~~~l~~~~~ 97 (111)
. ...|+.|.....
T Consensus 132 ~-~~~w~~L~~~~~ 144 (147)
T 2enp_A 132 G-GHWWKALIPSGP 144 (147)
T ss_dssp C-CCEEECCBCCCC
T ss_pred C-ccEEEEeecCCC
Confidence 3 468888874443
No 19
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.78 E-value=1.2e-18 Score=100.63 Aligned_cols=82 Identities=22% Similarity=0.498 Sum_probs=65.0
Q ss_pred cCCCCcEEEEEE-----CCeEEEeeeeCC-CCCcccceEEEEEcC----CCceEEEEEEeCCCCCC--CceeEEEEEECc
Q 037768 10 AGSVDPYVVLTC-----RTQEQKSSIGSG-SGPEWNETFVFTITG----DVTELTLKIMDKDTFSN--DDYLGEATISLE 77 (111)
Q Consensus 10 ~~~~dp~v~v~~-----~~~~~~T~~~~~-~~P~w~e~~~f~~~~----~~~~l~i~v~~~~~~~~--~~~lG~~~~~l~ 77 (111)
.|.+||||++.+ +...++|+++++ .||.|+|+|.|.+.. ....|.|+|||++..++ +++||++.+++.
T Consensus 36 ~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~ 115 (129)
T 2bwq_A 36 GRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQARVREEESEFLGEILIELE 115 (129)
T ss_dssp SCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEEEC-------CEEEEEEEEEGG
T ss_pred CCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEEECCcCcCcCCceeEEEEEEcc
Confidence 466899999998 345689999999 999999999998532 23589999999998887 999999999999
Q ss_pred ccccCCCCCCeEEEec
Q 037768 78 PLFMEGSLPPTAYNVV 93 (111)
Q Consensus 78 ~l~~~~~~~~~~~~l~ 93 (111)
++..++ ..+||+|.
T Consensus 116 ~l~~~~--~~~W~~Lq 129 (129)
T 2bwq_A 116 TALLDD--EPHWYKLQ 129 (129)
T ss_dssp GCCCSS--CEEEEECC
T ss_pred ccCCCc--CCccEECc
Confidence 987543 68999984
No 20
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.77 E-value=9.6e-19 Score=102.76 Aligned_cols=83 Identities=22% Similarity=0.410 Sum_probs=71.3
Q ss_pred cCCCCcEEEEEE---CCeEEEeeeeCC-CCCcccceEEEEEcCC---CceEEEEEEeCCCCCCCceeEEEEEECcccccC
Q 037768 10 AGSVDPYVVLTC---RTQEQKSSIGSG-SGPEWNETFVFTITGD---VTELTLKIMDKDTFSNDDYLGEATISLEPLFME 82 (111)
Q Consensus 10 ~~~~dp~v~v~~---~~~~~~T~~~~~-~~P~w~e~~~f~~~~~---~~~l~i~v~~~~~~~~~~~lG~~~~~l~~l~~~ 82 (111)
.+.+||||++.+ +...++|+++++ .||.|+|+|.|.+... ...|.|+|||++..+++++||++.+++.++..+
T Consensus 52 ~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~ 131 (143)
T 3f04_A 52 GGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFG 131 (143)
T ss_dssp GBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCTT
T ss_pred CCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCCCCCCCceEEEEEEEHHHccCC
Confidence 567899999998 445789999999 9999999999998653 368999999999998999999999999999754
Q ss_pred CCCCCeEEEec
Q 037768 83 GSLPPTAYNVV 93 (111)
Q Consensus 83 ~~~~~~~~~l~ 93 (111)
. ....|++|.
T Consensus 132 ~-~~~~W~~L~ 141 (143)
T 3f04_A 132 H-VTEEWRDLQ 141 (143)
T ss_dssp S-CEEEEEECB
T ss_pred C-CcceEEECc
Confidence 3 357999986
No 21
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.77 E-value=1.2e-18 Score=101.52 Aligned_cols=82 Identities=27% Similarity=0.513 Sum_probs=71.5
Q ss_pred cCCCCcEEEEEE-----CCeEEEeeeeCC-CCCcccceEEEEEcCC--CceEEEEEEeCCCCCCCceeEEEEEECccccc
Q 037768 10 AGSVDPYVVLTC-----RTQEQKSSIGSG-SGPEWNETFVFTITGD--VTELTLKIMDKDTFSNDDYLGEATISLEPLFM 81 (111)
Q Consensus 10 ~~~~dp~v~v~~-----~~~~~~T~~~~~-~~P~w~e~~~f~~~~~--~~~l~i~v~~~~~~~~~~~lG~~~~~l~~l~~ 81 (111)
.|.+||||++.+ ....++|+++++ .||.|+|+|.|.+... ...|.|+|||++..+++++||++.++++++..
T Consensus 34 ~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d~~~~~~~iG~~~i~l~~l~~ 113 (137)
T 3rdl_A 34 NGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWDRTTRNDFMGSLSFGVSELMK 113 (137)
T ss_dssp TSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECCSSSCCEEEEEEEEEHHHHHH
T ss_pred CCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECCCCCCCceEEEEEEeHHHhcc
Confidence 567899999998 455689999999 9999999999998753 24799999999999899999999999999975
Q ss_pred CCCCCCeEEEec
Q 037768 82 EGSLPPTAYNVV 93 (111)
Q Consensus 82 ~~~~~~~~~~l~ 93 (111)
++ ...|++|.
T Consensus 114 ~~--~~~W~~L~ 123 (137)
T 3rdl_A 114 MP--ASGWYKLL 123 (137)
T ss_dssp SC--EEEEEECB
T ss_pred Cc--cCceEECc
Confidence 44 57999997
No 22
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.77 E-value=4.1e-18 Score=102.63 Aligned_cols=71 Identities=25% Similarity=0.404 Sum_probs=59.7
Q ss_pred cCCCCcEEEEEECCeEEEeeeeC-C-CCCcccceEEEEEcCCCceEEEEEEeCCCCCCCceeEEEEEECcccccCC
Q 037768 10 AGSVDPYVVLTCRTQEQKSSIGS-G-SGPEWNETFVFTITGDVTELTLKIMDKDTFSNDDYLGEATISLEPLFMEG 83 (111)
Q Consensus 10 ~~~~dp~v~v~~~~~~~~T~~~~-~-~~P~w~e~~~f~~~~~~~~l~i~v~~~~~~~~~~~lG~~~~~l~~l~~~~ 83 (111)
.+.+||||++. .+.++|++++ + .||.|||+|.|.+......|.|+|||++ .++|++||++.+++.++....
T Consensus 29 ~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~dd~iG~~~i~L~~l~~~~ 101 (167)
T 2cjs_A 29 QEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIWDTMVGTVWIPLRTIRQSN 101 (167)
T ss_dssp GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCCTTSEEEEEEEECC-SSCCEEEEEEEEEGGGSCBCS
T ss_pred CCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeCCCCEEEEEEEECC-CCCCceEEEEEEEHHHhcccC
Confidence 46789999999 3345666665 5 9999999999999876678999999999 788999999999999986443
No 23
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.77 E-value=3.6e-19 Score=105.19 Aligned_cols=84 Identities=20% Similarity=0.362 Sum_probs=71.6
Q ss_pred cCCCCcEEEEEEC-----CeEEEeeeeCC-CCCcccceEEEEEcCC---CceEEEEEEeCCCCCCCceeEEEEEECcccc
Q 037768 10 AGSVDPYVVLTCR-----TQEQKSSIGSG-SGPEWNETFVFTITGD---VTELTLKIMDKDTFSNDDYLGEATISLEPLF 80 (111)
Q Consensus 10 ~~~~dp~v~v~~~-----~~~~~T~~~~~-~~P~w~e~~~f~~~~~---~~~l~i~v~~~~~~~~~~~lG~~~~~l~~l~ 80 (111)
.+.+||||++.+. ...++|+++++ .||.|+|+|.|.+... ...|.|+|||++..+++++||++.+++.++.
T Consensus 42 ~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~ 121 (148)
T 3fdw_A 42 KKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSWK 121 (148)
T ss_dssp TTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEEECGGGCEEEEEEEEEEHHHHH
T ss_pred CCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEEECCCCcCCcEEEEEEEEccccc
Confidence 4678999999984 23679999999 9999999999998764 3379999999999888999999999999997
Q ss_pred cCCCCCCeEEEecc
Q 037768 81 MEGSLPPTAYNVVK 94 (111)
Q Consensus 81 ~~~~~~~~~~~l~~ 94 (111)
.+.. ...|++|..
T Consensus 122 ~~~~-~~~W~~L~~ 134 (148)
T 3fdw_A 122 LDKK-LDHCLPLHG 134 (148)
T ss_dssp HHCC-SEEEEECBC
T ss_pred ccCC-ccceEECcC
Confidence 5543 579999983
No 24
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.77 E-value=3.6e-19 Score=105.78 Aligned_cols=84 Identities=20% Similarity=0.406 Sum_probs=69.6
Q ss_pred cCCCCcEEEEEEC-----CeEEEeeeeCC-CCCcccceEEEEEcC--CCceEEEEEEeCCCCCC-CceeEEEEEECcccc
Q 037768 10 AGSVDPYVVLTCR-----TQEQKSSIGSG-SGPEWNETFVFTITG--DVTELTLKIMDKDTFSN-DDYLGEATISLEPLF 80 (111)
Q Consensus 10 ~~~~dp~v~v~~~-----~~~~~T~~~~~-~~P~w~e~~~f~~~~--~~~~l~i~v~~~~~~~~-~~~lG~~~~~l~~l~ 80 (111)
.|.+||||++.+. ...++|+++++ .||.|+|+|.|.+.. ....|.|+|||++..++ +++||++.+++.++.
T Consensus 44 ~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~~~~~d~~lG~~~i~l~~l~ 123 (153)
T 3fbk_A 44 PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWNRASQSRQSGLIGCMSFGVKSLL 123 (153)
T ss_dssp SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEEECCSSGGGCEEEEEEEEEHHHHT
T ss_pred CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEEEeCCCCCCCCcEEEEEEEEHHHhc
Confidence 3778999999982 34589999999 999999999999843 33579999999998876 999999999999997
Q ss_pred cCCCCCCeEEEec
Q 037768 81 MEGSLPPTAYNVV 93 (111)
Q Consensus 81 ~~~~~~~~~~~l~ 93 (111)
..+.....|++|.
T Consensus 124 ~~~~~~~~W~~L~ 136 (153)
T 3fbk_A 124 TPDKEISGWYYLL 136 (153)
T ss_dssp C--CCEEEEEECB
T ss_pred CCCCccccEEECC
Confidence 4344457999998
No 25
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.77 E-value=2.2e-18 Score=102.28 Aligned_cols=83 Identities=22% Similarity=0.409 Sum_probs=71.1
Q ss_pred cCCCCcEEEEEE---CCeEEEeeeeCC-CCCcccceEEEEEcC---CCceEEEEEEeCCCCCCCceeEEEEEECcccccC
Q 037768 10 AGSVDPYVVLTC---RTQEQKSSIGSG-SGPEWNETFVFTITG---DVTELTLKIMDKDTFSNDDYLGEATISLEPLFME 82 (111)
Q Consensus 10 ~~~~dp~v~v~~---~~~~~~T~~~~~-~~P~w~e~~~f~~~~---~~~~l~i~v~~~~~~~~~~~lG~~~~~l~~l~~~ 82 (111)
.+.+||||++.+ +...++|+++++ .||.|+|+|.|.+.. ....|.|+|||++..+++++||++.+++.++..+
T Consensus 60 ~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~ 139 (152)
T 1rsy_A 60 GGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFG 139 (152)
T ss_dssp TSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCCS
T ss_pred CCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEECCCCCCCcEEEEEEEEchhccCC
Confidence 467899999998 345689999999 999999999998764 2468999999999988899999999999999754
Q ss_pred CCCCCeEEEec
Q 037768 83 GSLPPTAYNVV 93 (111)
Q Consensus 83 ~~~~~~~~~l~ 93 (111)
. ....|++|.
T Consensus 140 ~-~~~~W~~L~ 149 (152)
T 1rsy_A 140 H-VTEEWRDLQ 149 (152)
T ss_dssp S-CEEEEEECB
T ss_pred C-CcceEEECC
Confidence 4 357999986
No 26
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.76 E-value=9.7e-18 Score=108.13 Aligned_cols=100 Identities=24% Similarity=0.426 Sum_probs=83.7
Q ss_pred cCCCCcEEEEEEC---CeEEEeeeeCC-CCCcccceEEEEEcCC---CceEEEEEEeCCCCCCCceeEEEEEECcccccC
Q 037768 10 AGSVDPYVVLTCR---TQEQKSSIGSG-SGPEWNETFVFTITGD---VTELTLKIMDKDTFSNDDYLGEATISLEPLFME 82 (111)
Q Consensus 10 ~~~~dp~v~v~~~---~~~~~T~~~~~-~~P~w~e~~~f~~~~~---~~~l~i~v~~~~~~~~~~~lG~~~~~l~~l~~~ 82 (111)
.|.+||||++.+. ...++|+++++ .||.|+|+|.|.+... ...|.|+|||++..+++++||++.+++.++..+
T Consensus 37 ~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d~~~~~~~lG~~~i~l~~l~~~ 116 (284)
T 2r83_A 37 GGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFG 116 (284)
T ss_dssp SSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEECCSSSCCCEEEEEEEEGGGCCCS
T ss_pred CCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEECCCCCCCceeEEEEEcchhcccC
Confidence 4679999999984 34678999999 9999999999998753 358999999999988899999999999999754
Q ss_pred CCCCCeEEEeccC----CeEeeEEEEEEEEEe
Q 037768 83 GSLPPTAYNVVKN----QEYCGEIRVGLTFTP 110 (111)
Q Consensus 83 ~~~~~~~~~l~~~----~~~~G~l~l~~~~~~ 110 (111)
. ....|++|... ....|+|.+.+.|.|
T Consensus 117 ~-~~~~w~~L~~~~~~~~~~~G~i~l~l~~~p 147 (284)
T 2r83_A 117 H-VTEEWRDLQSAEKEEQEKLGDICFSLRYVP 147 (284)
T ss_dssp S-CEEEEEECBCCSSCCCCCCCEEEEEEEEET
T ss_pred C-cceeEEEeeccccccccccccEEEEEEecC
Confidence 3 35789999732 345799999999976
No 27
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.76 E-value=1.2e-18 Score=105.31 Aligned_cols=83 Identities=20% Similarity=0.319 Sum_probs=71.6
Q ss_pred cCCCCcEEEEEECC-----eEEEeeeeCC-CCCcccceEEEEEcCCCceEEEEEE-eCCCCCCCceeEEEEEECcccccC
Q 037768 10 AGSVDPYVVLTCRT-----QEQKSSIGSG-SGPEWNETFVFTITGDVTELTLKIM-DKDTFSNDDYLGEATISLEPLFME 82 (111)
Q Consensus 10 ~~~~dp~v~v~~~~-----~~~~T~~~~~-~~P~w~e~~~f~~~~~~~~l~i~v~-~~~~~~~~~~lG~~~~~l~~l~~~ 82 (111)
.|.+||||++.+.. ..++|+++++ .||.|+|+|.|.+......|.|+|| |++..+++++||++.+++.++..+
T Consensus 49 ~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l~~~ 128 (171)
T 2q3x_A 49 KSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLS 128 (171)
T ss_dssp -CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCCTTEEEEEEEEEECSTTCSSEEEEEEEECGGGSCTT
T ss_pred CCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecCCCCEEEEEEEEcCCCCCCCCEEEEEEEEHHHcccC
Confidence 47889999998842 2679999999 9999999999998766679999999 999998899999999999999754
Q ss_pred CCCCCeEEEec
Q 037768 83 GSLPPTAYNVV 93 (111)
Q Consensus 83 ~~~~~~~~~l~ 93 (111)
. ....|++|.
T Consensus 129 ~-~~~~W~~L~ 138 (171)
T 2q3x_A 129 S-MVIGWYKLF 138 (171)
T ss_dssp S-CEEEEEECB
T ss_pred C-CcceeEECC
Confidence 4 357999998
No 28
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.76 E-value=2.2e-18 Score=101.93 Aligned_cols=82 Identities=29% Similarity=0.478 Sum_probs=71.2
Q ss_pred cCCCCcEEEEEEC-----CeEEEeeeeCC-CCCcccceEEEEEcCC--CceEEEEEEeCCCCCCCceeEEEEEECccccc
Q 037768 10 AGSVDPYVVLTCR-----TQEQKSSIGSG-SGPEWNETFVFTITGD--VTELTLKIMDKDTFSNDDYLGEATISLEPLFM 81 (111)
Q Consensus 10 ~~~~dp~v~v~~~-----~~~~~T~~~~~-~~P~w~e~~~f~~~~~--~~~l~i~v~~~~~~~~~~~lG~~~~~l~~l~~ 81 (111)
.+.+||||++.+. ...++|+++++ .||.|+|+|.|.+... ...|.|+|||++..+++++||++.+++.++..
T Consensus 49 ~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~ 128 (149)
T 1a25_A 49 NGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQK 128 (149)
T ss_dssp TSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCSSSCCEEEEEEEEEHHHHTT
T ss_pred CCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECCCCCCCCEEEEEEEEHHHhCc
Confidence 4678999999985 35689999999 9999999999998763 34899999999999889999999999999975
Q ss_pred CCCCCCeEEEec
Q 037768 82 EGSLPPTAYNVV 93 (111)
Q Consensus 82 ~~~~~~~~~~l~ 93 (111)
+ . ...||+|.
T Consensus 129 ~-~-~~~W~~L~ 138 (149)
T 1a25_A 129 A-G-VDGWFKLL 138 (149)
T ss_dssp C-C-EEEEEECB
T ss_pred C-c-cCCeEEcc
Confidence 4 2 57899997
No 29
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.76 E-value=7.4e-19 Score=102.89 Aligned_cols=82 Identities=22% Similarity=0.498 Sum_probs=69.4
Q ss_pred cCCCCcEEEEEE-----CCeEEEeeeeCC-CCCcccceEEEEE-cCC---CceEEEEEEeCCCCCC--CceeEEEEEECc
Q 037768 10 AGSVDPYVVLTC-----RTQEQKSSIGSG-SGPEWNETFVFTI-TGD---VTELTLKIMDKDTFSN--DDYLGEATISLE 77 (111)
Q Consensus 10 ~~~~dp~v~v~~-----~~~~~~T~~~~~-~~P~w~e~~~f~~-~~~---~~~l~i~v~~~~~~~~--~~~lG~~~~~l~ 77 (111)
.+.+||||++.+ ....++|+++++ .||.|+|+|.|.+ ... ...|.|+|||++..++ +++||++.+++.
T Consensus 39 ~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~ 118 (141)
T 1v27_A 39 GRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQARVREEESEFLGEILIELE 118 (141)
T ss_dssp SCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEEBCSSSSCCBCCCEEEEEEGG
T ss_pred CCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEECCCCcCCCCceEEEEEEEcc
Confidence 467899999998 345679999999 9999999999984 332 3589999999998887 899999999999
Q ss_pred ccccCCCCCCeEEEec
Q 037768 78 PLFMEGSLPPTAYNVV 93 (111)
Q Consensus 78 ~l~~~~~~~~~~~~l~ 93 (111)
++..++ ...||+|.
T Consensus 119 ~l~~~~--~~~W~~L~ 132 (141)
T 1v27_A 119 TALLDD--EPHWYKLQ 132 (141)
T ss_dssp GCCCSS--EEEEEECB
T ss_pred ccCCCC--CCceEECc
Confidence 987543 57999998
No 30
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.76 E-value=8.1e-18 Score=109.28 Aligned_cols=101 Identities=26% Similarity=0.451 Sum_probs=81.7
Q ss_pred cCCCCcEEEEEE---CCeEEEeeeeCC-CCCcccceEEEEEcCC---CceEEEEEEeCCCCCCCceeEEEEEE-Cccccc
Q 037768 10 AGSVDPYVVLTC---RTQEQKSSIGSG-SGPEWNETFVFTITGD---VTELTLKIMDKDTFSNDDYLGEATIS-LEPLFM 81 (111)
Q Consensus 10 ~~~~dp~v~v~~---~~~~~~T~~~~~-~~P~w~e~~~f~~~~~---~~~l~i~v~~~~~~~~~~~lG~~~~~-l~~l~~ 81 (111)
.|.+||||++.+ +...++|+++++ .||.|+|+|.|.+... ...|.|+|||++.++++++||++.++ +.++..
T Consensus 38 ~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~~l~~~~~ 117 (296)
T 1dqv_A 38 NGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAE 117 (296)
T ss_dssp TSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEECCSSSCCCEEEEEECCCTTGGGS
T ss_pred CCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEEcCCCCCCceEEEEEecccccccc
Confidence 567899999998 456789999999 9999999999998653 34899999999999999999999985 555543
Q ss_pred CCCCCCeEEEecc---CCeEeeEEEEEEEEEe
Q 037768 82 EGSLPPTAYNVVK---NQEYCGEIRVGLTFTP 110 (111)
Q Consensus 82 ~~~~~~~~~~l~~---~~~~~G~l~l~~~~~~ 110 (111)
.......|++|.. .....|+|.+.+.|.|
T Consensus 118 ~~~~~~~w~~L~~~~~~~~~~G~i~vsl~y~~ 149 (296)
T 1dqv_A 118 QPPDRPLWRDILEGGSEKADLGELNFSLCYLP 149 (296)
T ss_dssp SCSSCCCCEECBCCSSCCSCCCEEEEEEEEET
T ss_pred CCccceeeeccccccccccccceEEEEEEecc
Confidence 3334568999972 2345799999999876
No 31
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.75 E-value=6.8e-18 Score=98.60 Aligned_cols=83 Identities=27% Similarity=0.404 Sum_probs=69.2
Q ss_pred CCCCcEEEEEEC---CeEEEeeeeCC-CCCcccceEEEE-EcCC---CceEEEEEEeCCCCCCCceeEEEEEECcccccC
Q 037768 11 GSVDPYVVLTCR---TQEQKSSIGSG-SGPEWNETFVFT-ITGD---VTELTLKIMDKDTFSNDDYLGEATISLEPLFME 82 (111)
Q Consensus 11 ~~~dp~v~v~~~---~~~~~T~~~~~-~~P~w~e~~~f~-~~~~---~~~l~i~v~~~~~~~~~~~lG~~~~~l~~l~~~ 82 (111)
+.+||||++.+. ...++|+++++ .||.|+|+|.|. +... ...|.|+|||++..+++++||++.+++.++..+
T Consensus 42 ~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~ 121 (138)
T 1ugk_A 42 MTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSFDRFSRDDIIGEVLIPLSGIELS 121 (138)
T ss_dssp TBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEEECSSCCCCCCEEEEEECTTCCCT
T ss_pred CCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEECCCCCCCcEEEEEEEehhHccCC
Confidence 678999999984 36789999999 999999999996 6542 348999999999998999999999999999765
Q ss_pred CCCCCeEEEec
Q 037768 83 GSLPPTAYNVV 93 (111)
Q Consensus 83 ~~~~~~~~~l~ 93 (111)
......|++|.
T Consensus 122 ~~~~~~~~~l~ 132 (138)
T 1ugk_A 122 EGKMLMNREII 132 (138)
T ss_dssp TCCEEEEEECB
T ss_pred CCcchhhhhhh
Confidence 44334567776
No 32
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.73 E-value=2e-18 Score=101.27 Aligned_cols=84 Identities=27% Similarity=0.467 Sum_probs=70.6
Q ss_pred cCCCCcEEEEEECCe--------------EEEeeeeCC-CCCcccceEEEE-EcC---CCceEEEEEEeCCCCCCCceeE
Q 037768 10 AGSVDPYVVLTCRTQ--------------EQKSSIGSG-SGPEWNETFVFT-ITG---DVTELTLKIMDKDTFSNDDYLG 70 (111)
Q Consensus 10 ~~~~dp~v~v~~~~~--------------~~~T~~~~~-~~P~w~e~~~f~-~~~---~~~~l~i~v~~~~~~~~~~~lG 70 (111)
.|.+||||++.+... .++|+++++ .||.|+|+|.|. +.. ....|.|+|||++..+++++||
T Consensus 36 ~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~~l~i~V~d~d~~~~~~~lG 115 (142)
T 1rh8_A 36 NGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKKTLEVTVWDYDRFSSNDFLG 115 (142)
T ss_dssp SSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTCEEEEEEEEECSSSCEEEEE
T ss_pred CCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCCEEEEEEEECCCCCCCceEE
Confidence 567899999999652 368899999 999999999997 543 3458999999999998899999
Q ss_pred EEEEECcccccCCCCCCeEEEecc
Q 037768 71 EATISLEPLFMEGSLPPTAYNVVK 94 (111)
Q Consensus 71 ~~~~~l~~l~~~~~~~~~~~~l~~ 94 (111)
++.+++.++.... ....|++|..
T Consensus 116 ~~~i~l~~l~~~~-~~~~W~~L~~ 138 (142)
T 1rh8_A 116 EVLIDLSSTSHLD-NTPRWYPLKE 138 (142)
T ss_dssp EEEEETTSCGGGT-TCCEEEECBC
T ss_pred EEEEeccccccCC-CCCeEEECCc
Confidence 9999999987543 4579999974
No 33
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.73 E-value=2.8e-17 Score=113.30 Aligned_cols=98 Identities=24% Similarity=0.392 Sum_probs=82.3
Q ss_pred cCCCCcEEEEEECCeEEEeeeeCC-CCCcccceEEEEEcCCC-ceEEEEEEeCCCCCCCceeEEEEEECcccccCCC---
Q 037768 10 AGSVDPYVVLTCRTQEQKSSIGSG-SGPEWNETFVFTITGDV-TELTLKIMDKDTFSNDDYLGEATISLEPLFMEGS--- 84 (111)
Q Consensus 10 ~~~~dp~v~v~~~~~~~~T~~~~~-~~P~w~e~~~f~~~~~~-~~l~i~v~~~~~~~~~~~lG~~~~~l~~l~~~~~--- 84 (111)
.|.+||||++.+++..++|+++++ .||.|+++|.|.+.... ..|.|+|||++..+++++||++.++++++..+..
T Consensus 405 ~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~~~~d~lG~~~~~l~~l~~~~~~~~ 484 (510)
T 3jzy_A 405 NGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQFSPDDFLGRTEIPVAKIRTEQESKG 484 (510)
T ss_dssp TSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSSSSCCEEEEEEEEHHHHHHHHHHHC
T ss_pred CCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCCCCCCceEEEEEEHHHhccccCCCC
Confidence 577999999999999999999999 99999999999997654 5799999999999999999999999999974321
Q ss_pred CCCeEEEeccCCeEeeEEEEEEEEE
Q 037768 85 LPPTAYNVVKNQEYCGEIRVGLTFT 109 (111)
Q Consensus 85 ~~~~~~~l~~~~~~~G~l~l~~~~~ 109 (111)
....|+++... ..|+|.+.+++.
T Consensus 485 ~~~~~~~l~~~--~~G~i~l~~~l~ 507 (510)
T 3jzy_A 485 PMTRRLLLHEV--PTGEVWVRFDLQ 507 (510)
T ss_dssp SCCEEEECBSS--SSCEEEEEEEEE
T ss_pred ceeeeecCCCC--CCceEEEEEEEE
Confidence 24688888743 458888777653
No 34
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.72 E-value=7.8e-18 Score=98.74 Aligned_cols=83 Identities=18% Similarity=0.338 Sum_probs=68.2
Q ss_pred cCCCCcEEEEEECC-----eEEEeeeeCC-CCCcccceEEEEEcCC---CceEEEEEEeCCCCCC--CceeEEEEEECcc
Q 037768 10 AGSVDPYVVLTCRT-----QEQKSSIGSG-SGPEWNETFVFTITGD---VTELTLKIMDKDTFSN--DDYLGEATISLEP 78 (111)
Q Consensus 10 ~~~~dp~v~v~~~~-----~~~~T~~~~~-~~P~w~e~~~f~~~~~---~~~l~i~v~~~~~~~~--~~~lG~~~~~l~~ 78 (111)
.| +||||++.+.. ..++|+++++ .||.|+|+|.|.+... ...|.|+|||++..+. +++||++.+++.+
T Consensus 42 ~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~ 120 (142)
T 2dmg_A 42 DG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNSGGFLSKDKGLLGKVLVALAS 120 (142)
T ss_dssp TC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEECCCSSCCSCCCCEEEEEECCC
T ss_pred CC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEECCCccccCCcEEEEEEEeccc
Confidence 45 89999999832 4679999999 9999999999997642 3489999999998753 5799999999999
Q ss_pred cccCCCCCCeEEEecc
Q 037768 79 LFMEGSLPPTAYNVVK 94 (111)
Q Consensus 79 l~~~~~~~~~~~~l~~ 94 (111)
+..+. ....|++|..
T Consensus 121 ~~~~~-~~~~W~~L~~ 135 (142)
T 2dmg_A 121 EELAK-GWTQWYDLTE 135 (142)
T ss_dssp STTTT-CBCCBCCCBC
T ss_pred ccccc-cccceeeccC
Confidence 87544 4578999984
No 35
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.72 E-value=1.8e-17 Score=97.19 Aligned_cols=83 Identities=27% Similarity=0.476 Sum_probs=68.2
Q ss_pred cCCCCcEEEEEECC-----eEEEeeeeCC-CCCcccceEEEE-EcCC---CceEEEEEEeCCCCCCCceeEEEEEECccc
Q 037768 10 AGSVDPYVVLTCRT-----QEQKSSIGSG-SGPEWNETFVFT-ITGD---VTELTLKIMDKDTFSNDDYLGEATISLEPL 79 (111)
Q Consensus 10 ~~~~dp~v~v~~~~-----~~~~T~~~~~-~~P~w~e~~~f~-~~~~---~~~l~i~v~~~~~~~~~~~lG~~~~~l~~l 79 (111)
.|.+||||++.+.. ..++|+++++ .||.|+|+|.|. +... ...|.|+|||++..+++++||++.+++.++
T Consensus 47 ~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l 126 (142)
T 2chd_A 47 NGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKL 126 (142)
T ss_dssp TSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEEEECTTSCEEEEEEEEEEGGGC
T ss_pred CCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEEECCCCCCCcEEEEEEEEHHHc
Confidence 56789999999854 5689999999 999999999998 5432 258999999999998899999999999998
Q ss_pred ccCCCCCCeEEEec
Q 037768 80 FMEGSLPPTAYNVV 93 (111)
Q Consensus 80 ~~~~~~~~~~~~l~ 93 (111)
..+. ....|++|.
T Consensus 127 ~~~~-~~~~~~~L~ 139 (142)
T 2chd_A 127 KANQ-RKNFNICLE 139 (142)
T ss_dssp CTTC-CEEEEEECB
T ss_pred CCCC-ccEEEEecc
Confidence 7543 344556654
No 36
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.71 E-value=6.1e-17 Score=96.63 Aligned_cols=84 Identities=19% Similarity=0.382 Sum_probs=68.5
Q ss_pred cCCCCcEEEEEECC-----eEEEeeeeCC-CCCcccceEEEEEcCC---CceEEEEEEeCCCCCCCceeEEEEEECccc-
Q 037768 10 AGSVDPYVVLTCRT-----QEQKSSIGSG-SGPEWNETFVFTITGD---VTELTLKIMDKDTFSNDDYLGEATISLEPL- 79 (111)
Q Consensus 10 ~~~~dp~v~v~~~~-----~~~~T~~~~~-~~P~w~e~~~f~~~~~---~~~l~i~v~~~~~~~~~~~lG~~~~~l~~l- 79 (111)
.|.+||||++.+.. ..++|+++++ .||.|+|+|.|.+... ...|.|+|||++..+++++||++.+++..+
T Consensus 43 ~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~ 122 (159)
T 1tjx_A 43 GGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTG 122 (159)
T ss_dssp TSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCCH
T ss_pred CCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEECCCCCCCceEEEEEECCCCCC
Confidence 46789999999842 3578999999 9999999999998753 347999999999998999999999999853
Q ss_pred ---------ccC-CCCCCeEEEec
Q 037768 80 ---------FME-GSLPPTAYNVV 93 (111)
Q Consensus 80 ---------~~~-~~~~~~~~~l~ 93 (111)
... +....+|++|.
T Consensus 123 ~~~~~w~~l~~~~~~~~~~W~~L~ 146 (159)
T 1tjx_A 123 AELRHWSDMLANPRRPIAQWHTLQ 146 (159)
T ss_dssp HHHHHHHHHHHSTTCCEEEEEECB
T ss_pred cHHHHHHHHHHCCCCeeeeEEECc
Confidence 212 23346899997
No 37
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.71 E-value=8.4e-17 Score=96.64 Aligned_cols=70 Identities=27% Similarity=0.512 Sum_probs=61.8
Q ss_pred cCCCCcEEEEEECC-----eEEEeeeeCC-CCCcccceEEEEEcCC---CceEEEEEEeCCCCCCCceeEEEEEECccc
Q 037768 10 AGSVDPYVVLTCRT-----QEQKSSIGSG-SGPEWNETFVFTITGD---VTELTLKIMDKDTFSNDDYLGEATISLEPL 79 (111)
Q Consensus 10 ~~~~dp~v~v~~~~-----~~~~T~~~~~-~~P~w~e~~~f~~~~~---~~~l~i~v~~~~~~~~~~~lG~~~~~l~~l 79 (111)
.|.+||||++.+.. ..++|+++++ .||.|+|+|.|.+... ...|.|+|||++..+++++||++.+++.++
T Consensus 55 ~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~ 133 (166)
T 2cm5_A 55 NGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAK 133 (166)
T ss_dssp TSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCC
T ss_pred CCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEECCCCCCCcEEEeEEEecccC
Confidence 46789999999854 5689999999 9999999999998753 348999999999998899999999999985
No 38
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.70 E-value=6e-17 Score=94.34 Aligned_cols=70 Identities=30% Similarity=0.521 Sum_probs=61.0
Q ss_pred cCCCCcEEEEEECC-----eEEEeeeeCC-CCCcccceEEEEEcCCC---ceEEEEEEeCCCCCCCceeEEEEEECccc
Q 037768 10 AGSVDPYVVLTCRT-----QEQKSSIGSG-SGPEWNETFVFTITGDV---TELTLKIMDKDTFSNDDYLGEATISLEPL 79 (111)
Q Consensus 10 ~~~~dp~v~v~~~~-----~~~~T~~~~~-~~P~w~e~~~f~~~~~~---~~l~i~v~~~~~~~~~~~lG~~~~~l~~l 79 (111)
.|.+||||++.+.. ..++|+++++ .||.|+|+|.|.+.... ..|.|+|||++..+++++||++.+++.++
T Consensus 34 ~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~d~~~~~~~~~lG~~~i~l~~~ 112 (138)
T 3n5a_A 34 GGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMDKDKLSRNDVIGKIYLSWKSG 112 (138)
T ss_dssp TTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEEECCSSSCCEEEEEEEESSSSC
T ss_pred CCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEEEECCCCCCCcEEEEEEEccccC
Confidence 56789999999853 3578999999 99999999999987643 48999999999998999999999999875
No 39
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.68 E-value=2.9e-16 Score=93.09 Aligned_cols=69 Identities=22% Similarity=0.445 Sum_probs=59.3
Q ss_pred cCCCCcEEEEEE--CCe---EEEeeeeCC-CCCcccceEEEEEcCCC---ceEEEEEEeCCCCCCCceeEEEEEECcc
Q 037768 10 AGSVDPYVVLTC--RTQ---EQKSSIGSG-SGPEWNETFVFTITGDV---TELTLKIMDKDTFSNDDYLGEATISLEP 78 (111)
Q Consensus 10 ~~~~dp~v~v~~--~~~---~~~T~~~~~-~~P~w~e~~~f~~~~~~---~~l~i~v~~~~~~~~~~~lG~~~~~l~~ 78 (111)
.|.+||||++.+ ... .++|+++++ .||.|+|+|.|.+.... ..|.|+|||++..+++++||++.+++.+
T Consensus 48 ~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~d~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 48 SGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDSERGSRNEVIGRLVLGATA 125 (153)
T ss_dssp --CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEECCTTSCCEEEEEEEESTTC
T ss_pred CCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCCC
Confidence 567899999998 333 569999999 99999999999987642 4799999999999899999999999988
No 40
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.68 E-value=3.4e-16 Score=108.57 Aligned_cols=90 Identities=19% Similarity=0.286 Sum_probs=74.6
Q ss_pred ecCCCCcEEEEEECCeEEEeeeeCC-CCCcccceEEEEEcC--CCceEEEEEEeCCCCCCCceeEEEEEECcccccCCCC
Q 037768 9 LAGSVDPYVVLTCRTQEQKSSIGSG-SGPEWNETFVFTITG--DVTELTLKIMDKDTFSNDDYLGEATISLEPLFMEGSL 85 (111)
Q Consensus 9 ~~~~~dp~v~v~~~~~~~~T~~~~~-~~P~w~e~~~f~~~~--~~~~l~i~v~~~~~~~~~~~lG~~~~~l~~l~~~~~~ 85 (111)
..|.+||||++.+++..++|+++++ +||.|+|+|.|.+.. ....|.|+|||++..++|++||++.++|.. +.
T Consensus 410 ~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~~~~dD~LG~~~~~L~~----g~- 484 (540)
T 3nsj_A 410 YTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDDDLLGSCDRSPHS----GF- 484 (540)
T ss_dssp SCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCSSSCCEEEEEEEECCCS----EE-
T ss_pred cCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCCCCCCCEEEEEEEEeeC----Cc-
Confidence 4678999999999988899999999 999999999998642 456899999999998889999999999883 22
Q ss_pred CCeEEEeccCCeEeeEEEEEEEE
Q 037768 86 PPTAYNVVKNQEYCGEIRVGLTF 108 (111)
Q Consensus 86 ~~~~~~l~~~~~~~G~l~l~~~~ 108 (111)
...|++|. .|.|+++++.
T Consensus 485 ~~~~~~l~-----~G~l~~~~~~ 502 (540)
T 3nsj_A 485 HEVTCELN-----HGRVKFSYHA 502 (540)
T ss_dssp EEEEEECS-----SSEEEEEEEE
T ss_pred EEEEEEcC-----CeEEEEEEEE
Confidence 34677764 4777777664
No 41
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.64 E-value=4.7e-15 Score=104.56 Aligned_cols=96 Identities=21% Similarity=0.376 Sum_probs=78.9
Q ss_pred cCCCCcEEEEEECC-----eEEEeeeeCC--CCCcccceEEEEEcCCC-ceEEEEEEeCCCCCCCceeEEEEEECccccc
Q 037768 10 AGSVDPYVVLTCRT-----QEQKSSIGSG--SGPEWNETFVFTITGDV-TELTLKIMDKDTFSNDDYLGEATISLEPLFM 81 (111)
Q Consensus 10 ~~~~dp~v~v~~~~-----~~~~T~~~~~--~~P~w~e~~~f~~~~~~-~~l~i~v~~~~~~~~~~~lG~~~~~l~~l~~ 81 (111)
.+.+||||++.+.+ ..++|+++++ .||.|||+|.|.+..+. ..|.|+|||++..+++++||++.+++..+..
T Consensus 517 ~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D~D~~~~dd~iG~~~ipl~~L~~ 596 (624)
T 1djx_A 517 NSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVEDYDSSSKNDFIGQSTIPWNSLKQ 596 (624)
T ss_dssp SSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEECCSSSCCEEEEEEEEEGGGBCC
T ss_pred cCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEEcCCCCCCceeEEEEEEHHHcCC
Confidence 46789999999833 5679988877 89999999999998755 4899999999998889999999999999874
Q ss_pred CCCCCCeEEEec-cCCe--EeeEEEEEEEEE
Q 037768 82 EGSLPPTAYNVV-KNQE--YCGEIRVGLTFT 109 (111)
Q Consensus 82 ~~~~~~~~~~l~-~~~~--~~G~l~l~~~~~ 109 (111)
+ .+|++|. ..+. ..+.|.+.++|.
T Consensus 597 G----~r~v~L~d~~g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 597 G----YRHVHLLSKNGDQHPSATLFVKISIQ 623 (624)
T ss_dssp E----EEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred C----cEEEeCCCCCcCCCCceEEEEEEEEE
Confidence 3 3689997 3333 467888888875
No 42
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.61 E-value=3.7e-15 Score=96.03 Aligned_cols=84 Identities=19% Similarity=0.338 Sum_probs=67.9
Q ss_pred cCCCCcEEEEEEC--C---eEEEeeeeCC-CCCcccceEEEEEcCC---CceEEEEEEeCCCCCCCceeEEEEEECcccc
Q 037768 10 AGSVDPYVVLTCR--T---QEQKSSIGSG-SGPEWNETFVFTITGD---VTELTLKIMDKDTFSNDDYLGEATISLEPLF 80 (111)
Q Consensus 10 ~~~~dp~v~v~~~--~---~~~~T~~~~~-~~P~w~e~~~f~~~~~---~~~l~i~v~~~~~~~~~~~lG~~~~~l~~l~ 80 (111)
.|.+||||++.+. + ..++|+++++ .||.|+|+|.|.+... ...|.|+|||++..+++++||++.+++..+.
T Consensus 168 ~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~ 247 (284)
T 2r83_A 168 GGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTG 247 (284)
T ss_dssp TSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEECCSSSCCCEEEEEEEETTCCH
T ss_pred CCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCCCCC
Confidence 4678999999983 2 3468999999 9999999999998764 2379999999999999999999999998632
Q ss_pred -----------cCCCCCCeEEEec
Q 037768 81 -----------MEGSLPPTAYNVV 93 (111)
Q Consensus 81 -----------~~~~~~~~~~~l~ 93 (111)
.......+|++|.
T Consensus 248 ~~~~~w~~~~~~~~~~~~~W~~L~ 271 (284)
T 2r83_A 248 AELRHWSDMLANPRRPIAQWHTLQ 271 (284)
T ss_dssp HHHHHHHHHHHSTTSCEEEEEECB
T ss_pred cHHHHHHHHHHCCCCchheeeecC
Confidence 1122346899997
No 43
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.59 E-value=1.1e-14 Score=104.10 Aligned_cols=83 Identities=24% Similarity=0.415 Sum_probs=72.3
Q ss_pred cCCCCcEEEEEEC---CeEEEeeeeCC-CCCcccceEEEEEcCC-CceEEEEEEeCCCCCCCceeEEEEEECcccccCCC
Q 037768 10 AGSVDPYVVLTCR---TQEQKSSIGSG-SGPEWNETFVFTITGD-VTELTLKIMDKDTFSNDDYLGEATISLEPLFMEGS 84 (111)
Q Consensus 10 ~~~~dp~v~v~~~---~~~~~T~~~~~-~~P~w~e~~~f~~~~~-~~~l~i~v~~~~~~~~~~~lG~~~~~l~~l~~~~~ 84 (111)
.|.+||||++.+. ...++|+++++ .||.|+|+|.|.+... ...|.|+|||++..+ +++||++.+++.++..+ .
T Consensus 39 ~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~D~~~-ddfIG~v~I~L~~L~~g-~ 116 (749)
T 1cjy_A 39 LDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANYVM-DETLGTATFTVSSMKVG-E 116 (749)
T ss_dssp HCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEECCSSS-CEEEEEECCBSTTSCTT-C
T ss_pred CCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEECCCCC-CceeEEEEEEHHHcCCC-C
Confidence 4679999999997 45789999999 9999999999999873 458999999999998 99999999999999744 3
Q ss_pred CCCeEEEecc
Q 037768 85 LPPTAYNVVK 94 (111)
Q Consensus 85 ~~~~~~~l~~ 94 (111)
....|++|..
T Consensus 117 ~~~~w~~L~~ 126 (749)
T 1cjy_A 117 KKEVPFIFNQ 126 (749)
T ss_dssp CCCEEEEETT
T ss_pred ceEEEEecCC
Confidence 4579999974
No 44
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.49 E-value=3.3e-15 Score=102.73 Aligned_cols=97 Identities=19% Similarity=0.283 Sum_probs=16.9
Q ss_pred CcEEEEEECCe-EEEeeeeCC----CCCcccceEEEEEcCCCceEEEEEEeC-C---CCCCCceeEEEEEECcccccCCC
Q 037768 14 DPYVVLTCRTQ-EQKSSIGSG----SGPEWNETFVFTITGDVTELTLKIMDK-D---TFSNDDYLGEATISLEPLFMEGS 84 (111)
Q Consensus 14 dp~v~v~~~~~-~~~T~~~~~----~~P~w~e~~~f~~~~~~~~l~i~v~~~-~---~~~~~~~lG~~~~~l~~l~~~~~ 84 (111)
||||++.+++. ..+|+++++ .||.|||+|.|.+.+....|.++|||+ + ..+++++||++.+++.++..+.
T Consensus 28 dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~~~~L~v~V~d~~d~~~~~~~d~~lG~v~i~l~~l~~~~- 106 (483)
T 3bxj_A 28 RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPAVRALRLHLYRDSDKKRKKDKAGYVGLVTVPVATLAGRH- 106 (483)
T ss_dssp -------------------------------CCEECC-------------------------------------------
T ss_pred CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCCccEEEEEEEecCCccccCCCCceEEEEEEEHHHhcCCC-
Confidence 89999998765 457877754 699999999998655556899999994 3 3577999999999999997543
Q ss_pred CCCeEEEec--cC-----------------------CeEeeEEEEEEEEEeC
Q 037768 85 LPPTAYNVV--KN-----------------------QEYCGEIRVGLTFTPE 111 (111)
Q Consensus 85 ~~~~~~~l~--~~-----------------------~~~~G~l~l~~~~~~~ 111 (111)
....||+|. .. ....|.|+|.+.|.++
T Consensus 107 ~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~v~~~~~ 158 (483)
T 3bxj_A 107 FTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKARYQTM 158 (483)
T ss_dssp CCEECC--------------------------------------CEEEEEEC
T ss_pred CCCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEEEEeeee
Confidence 457999995 21 1236899999999763
No 45
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.48 E-value=6.1e-15 Score=95.75 Aligned_cols=85 Identities=22% Similarity=0.365 Sum_probs=69.2
Q ss_pred cCCCCcEEEEEEC--C---eEEEeeeeCC-CCCcccceEEEEEcCC---CceEEEEEEeCCCCCCCceeEEEEEECcccc
Q 037768 10 AGSVDPYVVLTCR--T---QEQKSSIGSG-SGPEWNETFVFTITGD---VTELTLKIMDKDTFSNDDYLGEATISLEPLF 80 (111)
Q Consensus 10 ~~~~dp~v~v~~~--~---~~~~T~~~~~-~~P~w~e~~~f~~~~~---~~~l~i~v~~~~~~~~~~~lG~~~~~l~~l~ 80 (111)
.|.+||||++++. + ..++|+++++ .||.|+|+|.|.+... ...|.|+|||++..+++++||++.+++..+.
T Consensus 170 ~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~ 249 (296)
T 1dqv_A 170 TGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAAD 249 (296)
T ss_dssp SSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEECCSSSCCEEEEECCCSSCTTC
T ss_pred CCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEEEEEEeCCCCCCCceEEEEEECCccCC
Confidence 5678999999985 2 4579999999 9999999999988764 2479999999999999999999999998763
Q ss_pred c------------CCCCCCeEEEecc
Q 037768 81 M------------EGSLPPTAYNVVK 94 (111)
Q Consensus 81 ~------------~~~~~~~~~~l~~ 94 (111)
. .+....+|+.|..
T Consensus 250 ~~~~~~W~~~~~~~~~~~~~w~~L~~ 275 (296)
T 1dqv_A 250 PHGREHWAEMLANPRKPVEHWHQLVE 275 (296)
T ss_dssp HHHHHHHHTSSSSSSSCSCSCCCCBB
T ss_pred chhHHHHHHHHhCCCCceeEeeeccC
Confidence 2 2233468998873
No 46
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.39 E-value=4e-13 Score=95.55 Aligned_cols=82 Identities=30% Similarity=0.522 Sum_probs=70.3
Q ss_pred cCCCCcEEEEEE-----CCeEEEeeeeCC-CCCcccceEEEEEcCC--CceEEEEEEeCCCCCCCceeEEEEEECccccc
Q 037768 10 AGSVDPYVVLTC-----RTQEQKSSIGSG-SGPEWNETFVFTITGD--VTELTLKIMDKDTFSNDDYLGEATISLEPLFM 81 (111)
Q Consensus 10 ~~~~dp~v~v~~-----~~~~~~T~~~~~-~~P~w~e~~~f~~~~~--~~~l~i~v~~~~~~~~~~~lG~~~~~l~~l~~ 81 (111)
.|.+|||+++.+ ....++|+++++ .||.|+|+|.|.+... ...|.++|||++..+++++||++.+++.++..
T Consensus 190 ~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~~~~dd~iG~~~i~l~~l~~ 269 (674)
T 3pfq_A 190 NGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQK 269 (674)
T ss_dssp TSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCSSSCCEECCBCCCBTTHHHH
T ss_pred ccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeecccccccccccccccchhhhcc
Confidence 578999999998 345679999999 9999999999998753 34799999999999999999999999999975
Q ss_pred CCCCCCeEEEec
Q 037768 82 EGSLPPTAYNVV 93 (111)
Q Consensus 82 ~~~~~~~~~~l~ 93 (111)
.+ ...|+.|.
T Consensus 270 ~~--~~~w~~Ll 279 (674)
T 3pfq_A 270 AG--VDGWFKLL 279 (674)
T ss_dssp CC--EEEEEECB
T ss_pred CC--cccceeec
Confidence 43 37888886
No 47
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=99.34 E-value=1.2e-11 Score=70.19 Aligned_cols=91 Identities=14% Similarity=0.223 Sum_probs=71.2
Q ss_pred CCCcEEEEEECCeE----EEe-eeeCC-CCCcccceEEEEEcCCCceEEEEEEeCCCCCCCceeEEEEEECcccccC---
Q 037768 12 SVDPYVVLTCRTQE----QKS-SIGSG-SGPEWNETFVFTITGDVTELTLKIMDKDTFSNDDYLGEATISLEPLFME--- 82 (111)
Q Consensus 12 ~~dp~v~v~~~~~~----~~T-~~~~~-~~P~w~e~~~f~~~~~~~~l~i~v~~~~~~~~~~~lG~~~~~l~~l~~~--- 82 (111)
..||||.+.+.... -+| ...++ ..|.|+++|.-.+. ..+.|.|.|++... ++++.+++++++|...
T Consensus 26 ~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~-~Gr~l~i~Vfh~a~----~fvAn~tV~~edL~~~c~~ 100 (126)
T 1yrk_A 26 ANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIY-EGRVIQIVLMRAAE----EPVSEVTVGVSVLAERCKK 100 (126)
T ss_dssp SCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECC-TTCEEEEEEEEETT----EEEEEEEEEHHHHHHHHHT
T ss_pred cCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeee-CCEEEEEEEEcCCC----CeeeEEEEEHHHHHhhhcc
Confidence 47999999885443 144 55666 89999999998887 57899999997653 9999999999999733
Q ss_pred -CCCCCeEEEeccCCeEeeEEEEEEEEEeC
Q 037768 83 -GSLPPTAYNVVKNQEYCGEIRVGLTFTPE 111 (111)
Q Consensus 83 -~~~~~~~~~l~~~~~~~G~l~l~~~~~~~ 111 (111)
+.....|..|.+ +|.|++.+.|..+
T Consensus 101 ~~g~~e~WvdLeP----~Gkl~~~i~~~~e 126 (126)
T 1yrk_A 101 NNGKAEFWLDLQP----QAKVLMSVQYFLE 126 (126)
T ss_dssp TTTEEEEEEECBS----SCEEEEEEEEEBC
T ss_pred CCCceEEEEeccc----CcEEEEEEEEeeC
Confidence 234578999974 6889999888653
No 48
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.34 E-value=1.2e-11 Score=89.95 Aligned_cols=91 Identities=11% Similarity=0.223 Sum_probs=70.5
Q ss_pred CCCCcEEEEEECC------eEEEeeeeC-C-CCCcccc-eEEEE-EcCCC-ceEEEEEEeCCCCCCCceeEEEEEECccc
Q 037768 11 GSVDPYVVLTCRT------QEQKSSIGS-G-SGPEWNE-TFVFT-ITGDV-TELTLKIMDKDTFSNDDYLGEATISLEPL 79 (111)
Q Consensus 11 ~~~dp~v~v~~~~------~~~~T~~~~-~-~~P~w~e-~~~f~-~~~~~-~~l~i~v~~~~~~~~~~~lG~~~~~l~~l 79 (111)
..+||||+|.+.+ .+++|+++. + .||.||| +|.|. +..++ ..|.|+|||++ ++++|++.+||..+
T Consensus 740 ~~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~d----ddfiG~~~lpL~~L 815 (885)
T 3ohm_B 740 RKVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEEG----GKFVGHRILPVSAI 815 (885)
T ss_dssp SCCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEETT----TEEEEEEEEETTTC
T ss_pred cCCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcCC----ccEEeeEEEEHHHc
Confidence 3579999999843 246899886 5 9999999 69998 66544 38999999987 89999999999998
Q ss_pred ccCCCCCCeEEEec-cCCe--EeeEEEEEEEEE
Q 037768 80 FMEGSLPPTAYNVV-KNQE--YCGEIRVGLTFT 109 (111)
Q Consensus 80 ~~~~~~~~~~~~l~-~~~~--~~G~l~l~~~~~ 109 (111)
..+ -++++|. ..+. ..|.|.+.+++.
T Consensus 816 ~~G----yR~vpL~~~~g~~l~~atLfv~i~~~ 844 (885)
T 3ohm_B 816 RSG----YHYVCLRNEANQPLCLPALLIYTEAS 844 (885)
T ss_dssp CCE----EEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred CCC----ceEEEecCCCCCccCceEEEEEEEEE
Confidence 743 3457787 2332 468888888875
No 49
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.33 E-value=3.2e-11 Score=87.14 Aligned_cols=91 Identities=12% Similarity=0.224 Sum_probs=69.7
Q ss_pred CCCCcEEEEEECC-------eEEEeeeeC-C-CCCcccce-EEEE-EcCCC-ceEEEEEEeCCCCCCCceeEEEEEECcc
Q 037768 11 GSVDPYVVLTCRT-------QEQKSSIGS-G-SGPEWNET-FVFT-ITGDV-TELTLKIMDKDTFSNDDYLGEATISLEP 78 (111)
Q Consensus 11 ~~~dp~v~v~~~~-------~~~~T~~~~-~-~~P~w~e~-~~f~-~~~~~-~~l~i~v~~~~~~~~~~~lG~~~~~l~~ 78 (111)
...||||++.+.+ .+++|++++ + .||.|||+ |.|. +..++ ..|.|+|||++ ++++|++.+|++.
T Consensus 665 ~~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~D~d----ddfiG~~~ipL~~ 740 (816)
T 3qr0_A 665 KQISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVSEEN----GKFIGHRVMPLDG 740 (816)
T ss_dssp SCCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEEETT----SCEEEEEEEESTT
T ss_pred CCCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEEecC----CCeeeEEEEEHHH
Confidence 3579999999843 467899887 4 99999998 9998 76554 38999999985 7999999999999
Q ss_pred cccCCCCCCeEEEec-cCCe--EeeEEEEEEEEE
Q 037768 79 LFMEGSLPPTAYNVV-KNQE--YCGEIRVGLTFT 109 (111)
Q Consensus 79 l~~~~~~~~~~~~l~-~~~~--~~G~l~l~~~~~ 109 (111)
+..+ -++++|. ..+. ..+.|.+.+++.
T Consensus 741 L~~G----yR~vpL~~~~g~~~~~atLfv~i~~~ 770 (816)
T 3qr0_A 741 IKPG----YRHVPLRNESNRPLGLASVFAHIVAK 770 (816)
T ss_dssp CCCE----EEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred cCCc----ceEEEEeCCCCCCCCceEEEEEEEEE
Confidence 8743 3457787 3333 346777777654
No 50
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.31 E-value=3e-11 Score=87.27 Aligned_cols=91 Identities=21% Similarity=0.305 Sum_probs=70.1
Q ss_pred CCCCcEEEEEECC------eEEEee-eeC-C-CCCcccc-eEEE-EEcCCCc-eEEEEEEeCCCCCCCceeEEEEEECcc
Q 037768 11 GSVDPYVVLTCRT------QEQKSS-IGS-G-SGPEWNE-TFVF-TITGDVT-ELTLKIMDKDTFSNDDYLGEATISLEP 78 (111)
Q Consensus 11 ~~~dp~v~v~~~~------~~~~T~-~~~-~-~~P~w~e-~~~f-~~~~~~~-~l~i~v~~~~~~~~~~~lG~~~~~l~~ 78 (111)
+.+||||+|.+.+ .+++|+ +++ + .||.||| +|.| .+..++. .|.|+|||++ ++++|++.+|++.
T Consensus 693 ~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V~D~d----~d~iG~~~ipl~~ 768 (799)
T 2zkm_X 693 RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVMEEG----NKFLGHRIIPINA 768 (799)
T ss_dssp SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEEEETT----TEEEEEEEEEGGG
T ss_pred cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEEEEeC----CCccceEeeehhh
Confidence 4689999999832 257898 776 4 8999999 6999 7866544 8999999986 8999999999999
Q ss_pred cccCCCCCCeEEEecc-CCe--EeeEEEEEEEEE
Q 037768 79 LFMEGSLPPTAYNVVK-NQE--YCGEIRVGLTFT 109 (111)
Q Consensus 79 l~~~~~~~~~~~~l~~-~~~--~~G~l~l~~~~~ 109 (111)
+..+ -+|++|.. .+. ..+.|.+.+++.
T Consensus 769 L~~G----~r~v~L~~~~g~~~~~~~Lfv~i~~~ 798 (799)
T 2zkm_X 769 LNSG----YHHLCLHSESNMPLTMPALFIFLEMK 798 (799)
T ss_dssp BCCE----EEEEEEECTTCCEEEEEEEEEEEEEE
T ss_pred cCCC----cEEEeccCCCCCCCCceEEEEEEEEE
Confidence 8742 35788872 222 457788888764
No 51
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=99.26 E-value=2.7e-11 Score=69.56 Aligned_cols=90 Identities=17% Similarity=0.251 Sum_probs=69.8
Q ss_pred CCCcEEEEEECCeE----EEe-eeeCC-CCCcccceEEEEEcCCCceEEEEEEeCCCCCCCceeEEEEEECcccccC---
Q 037768 12 SVDPYVVLTCRTQE----QKS-SIGSG-SGPEWNETFVFTITGDVTELTLKIMDKDTFSNDDYLGEATISLEPLFME--- 82 (111)
Q Consensus 12 ~~dp~v~v~~~~~~----~~T-~~~~~-~~P~w~e~~~f~~~~~~~~l~i~v~~~~~~~~~~~lG~~~~~l~~l~~~--- 82 (111)
..||||.+.+.... -+| ...++ ..|.|++.|.-.+. ..+.|.|.|++... +|++.+++++.+|...
T Consensus 31 ~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~-~Gr~l~i~Vfh~a~----~fVAn~tV~~edL~~~ck~ 105 (138)
T 2enj_A 31 AVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHIN-KGRVMQIIVKGKNV----DLISETTVELYSLAERCRK 105 (138)
T ss_dssp CCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCC-SSCEEEEEEECSSC----SCCEEEEEESHHHHHHHHH
T ss_pred cCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEE-CCeEEEEEEEcCCC----CeeeEEEEEHHHHHhhhcc
Confidence 37999999885442 355 55556 89999999998877 57899999997553 9999999999999733
Q ss_pred -CCCCCeEEEeccCCeEeeEEEEEEEEEe
Q 037768 83 -GSLPPTAYNVVKNQEYCGEIRVGLTFTP 110 (111)
Q Consensus 83 -~~~~~~~~~l~~~~~~~G~l~l~~~~~~ 110 (111)
+.....|..|.+ .|.|++.+.|..
T Consensus 106 ~~g~~e~WvdLeP----~Gkl~v~i~~~~ 130 (138)
T 2enj_A 106 NNGKTEIWLELKP----QGRMLMNARYFL 130 (138)
T ss_dssp TTTCEEEEEECBS----SCEEEEEEEECC
T ss_pred CCCceEEEEeccc----CcEEEEEEEEEE
Confidence 334578999974 688888887753
No 52
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=96.22 E-value=0.061 Score=31.69 Aligned_cols=96 Identities=10% Similarity=0.211 Sum_probs=63.4
Q ss_pred CCCc--EEEEEEC-CeEEEeeeeCCCCCcccceEEEEEcCC--------CceEEEEEEeCCCCCCCceeEEEEEECcccc
Q 037768 12 SVDP--YVVLTCR-TQEQKSSIGSGSGPEWNETFVFTITGD--------VTELTLKIMDKDTFSNDDYLGEATISLEPLF 80 (111)
Q Consensus 12 ~~dp--~v~v~~~-~~~~~T~~~~~~~P~w~e~~~f~~~~~--------~~~l~i~v~~~~~~~~~~~lG~~~~~l~~l~ 80 (111)
..+| ||.+.+. -+.+.|.+..+.+|.++-+.+|.+... ...+.+++..-.. +....+|.+.+++.++.
T Consensus 39 d~~p~tF~t~dF~dfEtq~Tpv~~G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~lELhqa~g-~~~~tla~~~I~l~~lL 117 (156)
T 2yrb_A 39 DKEPVTFCTYAFYDFELQTTPVVRGLHPEYNFTSQYLVHVNDLFLQYIQKNTITLEVHQAYS-TEYETIAACQLKFHEIL 117 (156)
T ss_dssp SSCCEEEEEECSTTCCCEECCCEESSSCCCCEEEEEEECCSHHHHHHHHHCCEEEEEEEECS-SCEEEEEEEEECCSHHH
T ss_pred ccCCcEEEEEEEeceEeeecccccCCCCCcceEEEEEEEeCHHHHHHHhcCCEEEEEEEeeC-CCceEEEEEEEEhHHhh
Confidence 3455 4444443 445667777779999999999988652 2377888876543 34678999999999998
Q ss_pred cCCCCCCeEEEec-cCC--eEeeEEEEEEEE
Q 037768 81 MEGSLPPTAYNVV-KNQ--EYCGEIRVGLTF 108 (111)
Q Consensus 81 ~~~~~~~~~~~l~-~~~--~~~G~l~l~~~~ 108 (111)
...+..-...+|. ..+ ..-|.|...+++
T Consensus 118 e~~~~i~g~~~L~g~~g~~~~~G~LeywiRL 148 (156)
T 2yrb_A 118 EKSGRIFCTASLIGTKGDIPNFGTVEYWFRL 148 (156)
T ss_dssp HCCSCEEEEEEECBSSSCCTTSEEEEEEEEE
T ss_pred CcCCceEEEEEEEcCCCCcceEEEEEEEEEE
Confidence 5544222334565 233 356887776665
No 53
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=92.64 E-value=1.1 Score=27.84 Aligned_cols=54 Identities=22% Similarity=0.264 Sum_probs=40.6
Q ss_pred EEEeeeeCC-CCCcccceEEEEEcCC---CceEEEEEEeCCC----CCCCceeEEEEEECcc
Q 037768 25 EQKSSIGSG-SGPEWNETFVFTITGD---VTELTLKIMDKDT----FSNDDYLGEATISLEP 78 (111)
Q Consensus 25 ~~~T~~~~~-~~P~w~e~~~f~~~~~---~~~l~i~v~~~~~----~~~~~~lG~~~~~l~~ 78 (111)
.++|.+... .+|.|+|++.+.++.. ...|.|++++... ...+..+|-+-+||-+
T Consensus 78 e~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~ 139 (220)
T 3l4c_A 78 EYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMR 139 (220)
T ss_dssp CEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBC
T ss_pred eEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEccc
Confidence 368888888 9999999999999873 3378888887432 1224578988888764
No 54
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=85.33 E-value=5.1 Score=30.31 Aligned_cols=67 Identities=18% Similarity=0.130 Sum_probs=43.1
Q ss_pred CCcEEEEEE--CCeE----EEeeeeCC-CCCcccceEEEEEcC---C-CceEEEEEEeCCCC--C----------CCcee
Q 037768 13 VDPYVVLTC--RTQE----QKSSIGSG-SGPEWNETFVFTITG---D-VTELTLKIMDKDTF--S----------NDDYL 69 (111)
Q Consensus 13 ~dp~v~v~~--~~~~----~~T~~~~~-~~P~w~e~~~f~~~~---~-~~~l~i~v~~~~~~--~----------~~~~l 69 (111)
.+-||.+.+ |+.. ..|..+.. .+|.|||.+.|++.- + +..|.|++|+.... + .+..+
T Consensus 235 ~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~~~~~~~~~~~~~~~~~~~~l 314 (940)
T 2wxf_A 235 MKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYAVVEKAKKARSTKKKSKKADCPI 314 (940)
T ss_dssp CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEEEC----------------CEEE
T ss_pred ceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEEecCCccCccccccccccccceE
Confidence 355666655 4432 34555544 789999999998764 2 34899999984221 1 24588
Q ss_pred EEEEEECccc
Q 037768 70 GEATISLEPL 79 (111)
Q Consensus 70 G~~~~~l~~l 79 (111)
|.+.+++-+.
T Consensus 315 g~~~~~lFd~ 324 (940)
T 2wxf_A 315 AWANLMLFDY 324 (940)
T ss_dssp EEEEEESBCT
T ss_pred EEEeeeEECC
Confidence 9888887764
No 55
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=84.45 E-value=4.3 Score=30.78 Aligned_cols=67 Identities=18% Similarity=0.067 Sum_probs=40.5
Q ss_pred CcEEEEEE--CCeE---EEeeeeCC-CCCcccceEEEEEcC---C-CceEEEEEEeCCCC----------------CCCc
Q 037768 14 DPYVVLTC--RTQE---QKSSIGSG-SGPEWNETFVFTITG---D-VTELTLKIMDKDTF----------------SNDD 67 (111)
Q Consensus 14 dp~v~v~~--~~~~---~~T~~~~~-~~P~w~e~~~f~~~~---~-~~~l~i~v~~~~~~----------------~~~~ 67 (111)
+-||.+.+ |+.. .+|..+.- .+|.|||.+.|.+.- + +..|.|++|+.... ++..
T Consensus 239 ~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (961)
T 1e7u_A 239 TVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGAKPALSGKTSAEMPSPESKGKAQ 318 (961)
T ss_dssp EEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEEC--------------------C
T ss_pred eEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecccCccccccccccccccccccce
Confidence 45666544 4443 23433333 679999999998654 2 34889999974211 1245
Q ss_pred eeEEEEEECcccc
Q 037768 68 YLGEATISLEPLF 80 (111)
Q Consensus 68 ~lG~~~~~l~~l~ 80 (111)
.+|.+.+++-+..
T Consensus 319 ~lg~~n~~lfd~~ 331 (961)
T 1e7u_A 319 LLYYVNLLLIDHR 331 (961)
T ss_dssp EEEEEEEESBCTT
T ss_pred eEEEEeeeeecCC
Confidence 7888888876653
No 56
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=71.83 E-value=18 Score=28.00 Aligned_cols=67 Identities=21% Similarity=0.161 Sum_probs=41.9
Q ss_pred CCcEEEEEE--CCeE----EEeeeeCCCCCcccceEEEEEcC----CCceEEEEEEeCCCC----CCCceeEEEEEECcc
Q 037768 13 VDPYVVLTC--RTQE----QKSSIGSGSGPEWNETFVFTITG----DVTELTLKIMDKDTF----SNDDYLGEATISLEP 78 (111)
Q Consensus 13 ~dp~v~v~~--~~~~----~~T~~~~~~~P~w~e~~~f~~~~----~~~~l~i~v~~~~~~----~~~~~lG~~~~~l~~ 78 (111)
.+-||.+.+ |++. .+|..+...+|.|||...|.+.- ....|.|++|+.... ..+..+|.+.+++-+
T Consensus 375 ~~~~V~~~l~hG~~~L~~~~~T~~~~~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~~~~~~~~~~~~~~lg~~n~~lfd 454 (1091)
T 3hhm_A 375 DKIYVRTGIYHGGEPLCDNVNTQRVPCSNPRWNEWLNYDIYIPDLPRAARLCLSICSVKGRKGAKEEHCPLAWGNINLFD 454 (1091)
T ss_dssp CCCCEEEEEESSSCSSCCEECCCCCCTTSCEEEEEEEEEEEGGGCCTTCEEEEEECCCCCCC-------CCEEEEEESBC
T ss_pred ceEEEEEEEEECCEEccCceeccccCCCCCCCCeeEEecCccccCChhcEEEEEEEEecCccCcccccceeEEeeeeeEc
Confidence 456888776 3332 23332322677899999998753 244899999985432 124578988888776
Q ss_pred c
Q 037768 79 L 79 (111)
Q Consensus 79 l 79 (111)
.
T Consensus 455 ~ 455 (1091)
T 3hhm_A 455 Y 455 (1091)
T ss_dssp T
T ss_pred c
Confidence 5
No 57
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=67.31 E-value=15 Score=28.37 Aligned_cols=34 Identities=29% Similarity=0.375 Sum_probs=25.1
Q ss_pred EeeeeCC-CCCcccceEEEEEcC---C-CceEEEEEEeC
Q 037768 27 KSSIGSG-SGPEWNETFVFTITG---D-VTELTLKIMDK 60 (111)
Q Consensus 27 ~T~~~~~-~~P~w~e~~~f~~~~---~-~~~l~i~v~~~ 60 (111)
+|..+.. .+|.|||.+.|.+.- + +..|.|++|+.
T Consensus 391 ~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~~ 429 (1092)
T 2y3a_A 391 VSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYAV 429 (1092)
T ss_dssp BCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCCC
T ss_pred ecccccCCCCCccceeEEeCCccccCChhcEEEEEEEEe
Confidence 4555554 789999999998764 2 34899999985
No 58
>2kzb_A Autophagy-related protein 19; selective autophagy, ATG19, alpha-mannosidase, protein trans; NMR {Saccharomyces cerevisiae}
Probab=26.94 E-value=61 Score=17.44 Aligned_cols=40 Identities=10% Similarity=0.267 Sum_probs=26.5
Q ss_pred CcccceEEEEEcCCCceEEEEEEeCCCCCCCceeEEEEEECcc
Q 037768 36 PEWNETFVFTITGDVTELTLKIMDKDTFSNDDYLGEATISLEP 78 (111)
Q Consensus 36 P~w~e~~~f~~~~~~~~l~i~v~~~~~~~~~~~lG~~~~~l~~ 78 (111)
|.-+..+.+.+...+..|.|.+|+..+ .-+-|.|.+.+..
T Consensus 7 ~pn~~sL~Itvs~rDnsL~F~lyNntn---~~lpGnCtl~fs~ 46 (118)
T 2kzb_A 7 PPNERSLQITMNQRDNSLYFQLFNNTN---SVLAGNCKLKFTD 46 (118)
T ss_dssp CSSCCCEEEEEEEETTEEEEEEEECSS---SCCCSSCEECCCS
T ss_pred CCCCccEEEEEecCCCeEEEEEecCCc---eeccCccEEEEec
Confidence 334455667777667789999998764 3344667776654
Done!