Query 037779
Match_columns 310
No_of_seqs 177 out of 1546
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 06:41:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037779.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037779hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3o07_A Pyridoxine biosynthesis 100.0 2.5E-48 8.6E-53 348.4 22.1 277 33-309 9-290 (291)
2 2yzr_A Pyridoxal biosynthesis 100.0 6.2E-45 2.1E-49 335.4 19.8 287 23-309 5-329 (330)
3 4adt_A Pyridoxine biosynthetic 100.0 1.6E-41 5.5E-46 312.9 18.4 281 22-302 8-288 (297)
4 3tsm_A IGPS, indole-3-glycerol 100.0 3.4E-34 1.1E-38 261.1 21.7 208 12-272 59-269 (272)
5 3qja_A IGPS, indole-3-glycerol 100.0 3.7E-34 1.3E-38 261.6 19.9 215 10-279 50-269 (272)
6 4a29_A Engineered retro-aldol 100.0 9.8E-34 3.3E-38 252.9 17.7 200 11-271 45-249 (258)
7 2nv1_A Pyridoxal biosynthesis 100.0 1.2E-32 4E-37 256.0 20.4 287 22-308 8-295 (305)
8 1i4n_A Indole-3-glycerol phosp 100.0 1.6E-31 5.5E-36 240.7 22.7 205 12-271 41-249 (251)
9 1vc4_A Indole-3-glycerol phosp 100.0 5.3E-32 1.8E-36 245.3 17.9 205 11-269 45-253 (254)
10 1pii_A N-(5'phosphoribosyl)ant 100.0 9.2E-32 3.2E-36 260.3 19.3 239 11-305 47-290 (452)
11 2zbt_A Pyridoxal biosynthesis 100.0 2.4E-28 8.2E-33 226.0 22.1 278 28-305 14-291 (297)
12 3q58_A N-acetylmannosamine-6-p 99.9 2.3E-21 8E-26 172.8 18.4 174 46-273 40-228 (229)
13 3igs_A N-acetylmannosamine-6-p 99.9 1.3E-20 4.5E-25 168.3 19.9 175 46-274 40-229 (232)
14 3o63_A Probable thiamine-phosp 99.8 5.1E-18 1.8E-22 152.3 15.6 184 45-274 46-241 (243)
15 2w6r_A Imidazole glycerol phos 99.8 1.8E-17 6.1E-22 150.1 18.5 200 30-268 17-245 (266)
16 1vzw_A Phosphoribosyl isomeras 99.8 8.7E-18 3E-22 150.4 15.2 201 28-268 14-238 (244)
17 1qo2_A Molecule: N-((5-phospho 99.8 4.5E-18 1.5E-22 152.2 12.6 200 28-268 11-239 (241)
18 2y88_A Phosphoribosyl isomeras 99.7 9.1E-18 3.1E-22 150.1 13.7 199 28-266 13-239 (244)
19 1y0e_A Putative N-acetylmannos 99.7 5.4E-17 1.8E-21 143.3 17.0 179 46-272 27-221 (223)
20 1thf_D HISF protein; thermophI 99.7 1.7E-16 5.9E-21 142.5 17.9 186 43-268 30-241 (253)
21 1ka9_F Imidazole glycerol phos 99.7 1.2E-16 4.2E-21 143.4 16.4 183 45-266 34-239 (252)
22 3tdn_A FLR symmetric alpha-bet 99.7 3.1E-17 1.1E-21 147.3 7.5 198 32-268 24-245 (247)
23 2v82_A 2-dehydro-3-deoxy-6-pho 99.7 2E-15 6.8E-20 132.3 17.9 191 26-274 5-202 (212)
24 1yxy_A Putative N-acetylmannos 99.7 4.8E-15 1.7E-19 131.8 20.0 175 45-272 39-232 (234)
25 3nl6_A Thiamine biosynthetic b 99.6 5.6E-15 1.9E-19 146.4 18.8 187 45-275 28-232 (540)
26 4gj1_A 1-(5-phosphoribosyl)-5- 99.6 1.8E-14 6.3E-19 129.2 18.9 211 28-261 12-233 (243)
27 1h5y_A HISF; histidine biosynt 99.6 7.6E-15 2.6E-19 130.8 15.5 184 45-267 36-242 (253)
28 2yw3_A 4-hydroxy-2-oxoglutarat 99.6 8E-14 2.7E-18 122.2 18.1 185 28-273 13-202 (207)
29 1xi3_A Thiamine phosphate pyro 99.6 8.8E-14 3E-18 121.5 17.9 180 45-274 29-212 (215)
30 1tqj_A Ribulose-phosphate 3-ep 99.6 8.9E-15 3.1E-19 130.2 11.4 185 45-272 20-221 (230)
31 3bo9_A Putative nitroalkan dio 99.6 1.1E-13 3.8E-18 129.3 18.7 190 37-272 32-224 (326)
32 2tps_A Protein (thiamin phosph 99.6 9.7E-14 3.3E-18 122.4 17.1 183 45-274 34-222 (227)
33 1h1y_A D-ribulose-5-phosphate 99.6 1.4E-13 4.7E-18 122.2 18.1 188 45-275 22-224 (228)
34 1yad_A Regulatory protein TENI 99.6 1.4E-13 4.7E-18 121.4 17.3 179 46-274 33-214 (221)
35 1wa3_A 2-keto-3-deoxy-6-phosph 99.6 1.3E-13 4.5E-18 120.0 16.8 171 46-274 26-202 (205)
36 3ceu_A Thiamine phosphate pyro 99.6 2.2E-14 7.4E-19 125.9 11.5 176 45-275 16-194 (210)
37 2agk_A 1-(5-phosphoribosyl)-5- 99.5 4.1E-14 1.4E-18 128.2 13.5 212 28-268 11-255 (260)
38 3f4w_A Putative hexulose 6 pho 99.5 1.7E-13 5.7E-18 119.7 16.9 182 46-274 17-209 (211)
39 2fli_A Ribulose-phosphate 3-ep 99.5 1.1E-13 3.7E-18 121.6 14.9 186 45-273 19-219 (220)
40 2z6i_A Trans-2-enoyl-ACP reduc 99.5 5.1E-13 1.7E-17 125.0 19.2 192 37-274 18-212 (332)
41 2h6r_A Triosephosphate isomera 99.5 3.6E-14 1.2E-18 125.4 10.6 163 81-271 42-218 (219)
42 2gjl_A Hypothetical protein PA 99.5 9.2E-13 3.1E-17 123.0 19.6 195 37-274 21-222 (328)
43 1rpx_A Protein (ribulose-phosp 99.5 2.3E-13 7.8E-18 120.6 13.8 188 45-272 26-227 (230)
44 1wv2_A Thiazole moeity, thiazo 99.5 1.7E-12 5.7E-17 115.8 19.2 194 46-281 34-245 (265)
45 1jvn_A Glutamine, bifunctional 99.5 2.8E-13 9.4E-18 135.1 14.8 211 46-268 284-542 (555)
46 3ovp_A Ribulose-phosphate 3-ep 99.5 6E-13 2E-17 118.3 15.0 188 46-275 21-220 (228)
47 3inp_A D-ribulose-phosphate 3- 99.5 4.8E-13 1.6E-17 120.0 14.4 187 46-274 44-245 (246)
48 1w0m_A TIM, triosephosphate is 99.5 5.4E-13 1.9E-17 118.1 14.3 165 81-274 45-224 (226)
49 3bw2_A 2-nitropropane dioxygen 99.5 3.9E-12 1.3E-16 120.6 21.0 197 41-272 21-256 (369)
50 4e38_A Keto-hydroxyglutarate-a 99.5 5.1E-12 1.7E-16 112.2 19.2 158 45-257 49-207 (232)
51 1rd5_A Tryptophan synthase alp 99.5 2.8E-12 9.4E-17 116.0 17.9 196 46-272 36-257 (262)
52 1xm3_A Thiazole biosynthesis p 99.5 1.2E-12 4.1E-17 118.8 15.4 190 46-278 27-233 (264)
53 2htm_A Thiazole biosynthesis p 99.5 9.2E-13 3.2E-17 117.8 14.2 194 45-283 26-238 (268)
54 1hg3_A Triosephosphate isomera 99.4 6.8E-13 2.3E-17 117.4 12.9 162 81-271 48-224 (225)
55 1vhc_A Putative KHG/KDPG aldol 99.4 9.6E-12 3.3E-16 110.2 20.0 157 45-258 32-191 (224)
56 3ctl_A D-allulose-6-phosphate 99.4 1.7E-12 5.7E-17 115.6 15.0 186 46-274 17-219 (231)
57 1geq_A Tryptophan synthase alp 99.4 8.7E-13 3E-17 118.0 12.3 197 45-273 22-242 (248)
58 3vnd_A TSA, tryptophan synthas 99.4 5.1E-12 1.7E-16 114.7 17.4 181 46-257 36-240 (267)
59 1wbh_A KHG/KDPG aldolase; lyas 99.4 1.7E-11 5.8E-16 107.8 20.2 158 45-259 31-191 (214)
60 3nav_A Tryptophan synthase alp 99.4 5.3E-12 1.8E-16 114.8 17.3 179 46-257 38-242 (271)
61 1mxs_A KDPG aldolase; 2-keto-3 99.4 8.7E-12 3E-16 110.5 17.9 157 45-258 41-200 (225)
62 3ajx_A 3-hexulose-6-phosphate 99.4 4.2E-12 1.4E-16 110.4 15.3 177 46-271 17-205 (207)
63 3khj_A Inosine-5-monophosphate 99.4 1.9E-11 6.3E-16 115.6 19.9 185 37-260 51-244 (361)
64 2qjg_A Putative aldolase MJ040 99.4 9.4E-12 3.2E-16 112.9 15.9 182 37-279 39-264 (273)
65 1qop_A Tryptophan synthase alp 99.4 2.8E-11 9.7E-16 109.9 18.4 198 45-273 34-263 (268)
66 1tqx_A D-ribulose-5-phosphate 99.4 1.2E-11 4.2E-16 109.6 15.5 187 45-275 21-224 (227)
67 2ekc_A AQ_1548, tryptophan syn 99.3 2.1E-11 7.1E-16 110.5 15.7 197 45-274 34-258 (262)
68 3lab_A Putative KDPG (2-keto-3 99.3 3.7E-11 1.3E-15 105.2 16.0 173 28-257 13-192 (217)
69 4fo4_A Inosine 5'-monophosphat 99.3 1.5E-10 5.3E-15 109.4 20.8 186 37-260 52-248 (366)
70 3cu2_A Ribulose-5-phosphate 3- 99.3 1.4E-11 4.7E-16 110.0 11.0 182 45-271 29-235 (237)
71 3jr2_A Hexulose-6-phosphate sy 99.3 9.8E-12 3.4E-16 109.4 8.9 184 46-274 23-215 (218)
72 3ffs_A Inosine-5-monophosphate 99.2 5.4E-10 1.8E-14 106.7 19.9 130 104-260 146-283 (400)
73 1ujp_A Tryptophan synthase alp 99.2 1.1E-10 3.8E-15 106.1 14.2 178 46-258 34-235 (271)
74 3r2g_A Inosine 5'-monophosphat 99.2 1.2E-09 3.9E-14 103.0 17.8 179 38-259 49-235 (361)
75 1viz_A PCRB protein homolog; s 99.1 3.9E-10 1.3E-14 100.6 13.2 174 43-273 21-228 (240)
76 3tha_A Tryptophan synthase alp 99.1 4E-10 1.4E-14 101.1 13.2 177 46-257 32-232 (252)
77 1p0k_A Isopentenyl-diphosphate 99.1 2.7E-10 9.4E-15 107.1 12.2 48 209-258 238-286 (349)
78 2p10_A MLL9387 protein; putati 99.1 8E-09 2.7E-13 93.2 18.7 208 46-275 39-281 (286)
79 3b0p_A TRNA-dihydrouridine syn 99.1 1.2E-09 4.1E-14 102.8 13.1 157 46-266 74-239 (350)
80 1ypf_A GMP reductase; GUAC, pu 99.1 5.9E-09 2E-13 97.5 17.8 180 39-258 54-245 (336)
81 2f6u_A GGGPS, (S)-3-O-geranylg 99.0 3.8E-10 1.3E-14 100.2 7.7 162 43-258 21-224 (234)
82 1w8s_A FBP aldolase, fructose- 99.0 1.3E-08 4.6E-13 92.0 17.6 178 41-278 39-257 (263)
83 4avf_A Inosine-5'-monophosphat 99.0 8.8E-09 3E-13 101.1 16.7 129 104-259 231-368 (490)
84 1vhn_A Putative flavin oxidore 98.9 8.2E-09 2.8E-13 95.8 13.1 146 46-267 75-228 (318)
85 3usb_A Inosine-5'-monophosphat 98.9 2.1E-08 7.3E-13 98.8 16.7 182 46-260 197-396 (511)
86 4fxs_A Inosine-5'-monophosphat 98.9 1.7E-08 5.7E-13 99.2 15.9 128 104-259 233-370 (496)
87 1gox_A (S)-2-hydroxy-acid oxid 98.9 1.3E-09 4.3E-14 103.4 6.4 166 45-258 139-315 (370)
88 1jcn_A Inosine monophosphate d 98.9 1.9E-08 6.6E-13 99.2 14.2 134 104-260 257-395 (514)
89 1jub_A Dihydroorotate dehydrog 98.9 1.5E-08 5.3E-13 93.4 12.3 75 209-288 228-305 (311)
90 3glc_A Aldolase LSRF; TIM barr 98.9 2.9E-08 9.8E-13 91.1 13.9 136 106-284 130-289 (295)
91 1q6o_A Humps, 3-keto-L-gulonat 98.8 2.6E-08 9E-13 87.2 12.5 158 81-274 44-213 (216)
92 3vzx_A Heptaprenylglyceryl pho 98.8 3.2E-08 1.1E-12 87.4 12.2 59 209-273 167-226 (228)
93 2uva_G Fatty acid synthase bet 98.8 6.5E-08 2.2E-12 108.2 17.4 194 41-275 593-817 (2060)
94 4af0_A Inosine-5'-monophosphat 98.8 3E-08 1E-12 96.9 12.8 126 104-259 283-420 (556)
95 3w01_A Heptaprenylglyceryl pho 98.8 2.5E-08 8.6E-13 88.3 11.1 47 209-258 173-220 (235)
96 3zwt_A Dihydroorotate dehydrog 98.8 2.4E-08 8E-13 94.5 11.7 74 209-287 284-360 (367)
97 1ep3_A Dihydroorotate dehydrog 98.8 5.6E-08 1.9E-12 89.3 13.9 163 85-265 90-283 (311)
98 2nli_A Lactate oxidase; flavoe 98.8 5.1E-08 1.7E-12 92.3 13.3 98 128-258 219-319 (368)
99 3sr7_A Isopentenyl-diphosphate 98.8 2.3E-08 7.8E-13 94.4 10.7 46 210-257 266-312 (365)
100 2e6f_A Dihydroorotate dehydrog 98.8 9.5E-09 3.2E-13 95.0 7.5 53 210-264 232-286 (314)
101 1vrd_A Inosine-5'-monophosphat 98.8 1.2E-07 4.2E-12 92.9 15.8 129 104-258 239-375 (494)
102 2qr6_A IMP dehydrogenase/GMP r 98.8 1.7E-07 5.8E-12 89.4 15.8 143 85-259 149-313 (393)
103 3sgz_A Hydroxyacid oxidase 2; 98.7 9.2E-08 3.2E-12 89.7 13.4 96 129-257 208-306 (352)
104 2czd_A Orotidine 5'-phosphate 98.7 1.1E-07 3.7E-12 82.8 13.0 148 81-273 40-206 (208)
105 3exr_A RMPD (hexulose-6-phosph 98.7 4.2E-08 1.4E-12 86.5 10.3 161 81-274 46-218 (221)
106 3oix_A Putative dihydroorotate 98.7 9.4E-08 3.2E-12 89.6 13.1 76 209-289 261-339 (345)
107 1eep_A Inosine 5'-monophosphat 98.7 1E-07 3.5E-12 91.2 13.7 128 105-259 156-292 (404)
108 1kbi_A Cytochrome B2, L-LCR; f 98.7 5.1E-08 1.7E-12 96.1 11.6 98 128-258 333-438 (511)
109 3vkj_A Isopentenyl-diphosphate 98.7 3.5E-08 1.2E-12 93.3 10.1 45 211-257 256-301 (368)
110 2nzl_A Hydroxyacid oxidase 1; 98.7 5.6E-08 1.9E-12 92.7 11.5 98 128-258 242-342 (392)
111 3gr7_A NADPH dehydrogenase; fl 98.7 2.8E-07 9.5E-12 86.3 15.9 57 209-267 265-322 (340)
112 3zen_D Fatty acid synthase; tr 98.7 5.6E-08 1.9E-12 111.7 13.1 178 42-260 439-654 (3089)
113 1to3_A Putative aldolase YIHT; 98.7 5.3E-08 1.8E-12 89.9 10.3 138 106-278 113-292 (304)
114 4ef8_A Dihydroorotate dehydrog 98.7 3.2E-08 1.1E-12 93.1 9.0 76 209-289 264-341 (354)
115 1z41_A YQJM, probable NADH-dep 98.7 6.6E-07 2.3E-11 83.6 16.7 56 209-266 265-321 (338)
116 3i65_A Dihydroorotate dehydrog 98.6 1.1E-07 3.8E-12 90.9 9.9 76 209-289 331-409 (415)
117 1gte_A Dihydropyrimidine dehyd 98.6 1.7E-07 5.9E-12 99.6 12.5 159 46-257 652-821 (1025)
118 2c6q_A GMP reductase 2; TIM ba 98.6 3.3E-07 1.1E-11 86.1 12.6 177 40-258 66-258 (351)
119 2uv8_G Fatty acid synthase sub 98.6 4.9E-07 1.7E-11 100.8 15.8 199 35-274 594-823 (2051)
120 1f76_A Dihydroorotate dehydrog 98.6 2.2E-07 7.4E-12 86.7 10.1 51 210-262 276-329 (336)
121 3hgj_A Chromate reductase; TIM 98.6 1.4E-06 5E-11 81.7 15.7 56 209-266 276-332 (349)
122 1zfj_A Inosine monophosphate d 98.5 3.7E-06 1.3E-10 82.2 17.3 182 45-258 173-371 (491)
123 1vcf_A Isopentenyl-diphosphate 98.5 4.8E-07 1.6E-11 84.3 9.6 114 128-257 172-290 (332)
124 1tv5_A Dhodehase, dihydroorota 98.5 1.5E-06 5E-11 84.0 13.2 76 209-289 359-437 (443)
125 1me8_A Inosine-5'-monophosphat 98.4 1.2E-06 4.2E-11 86.1 12.2 128 105-259 245-388 (503)
126 3l5l_A Xenobiotic reductase A; 98.4 4E-06 1.4E-10 79.1 14.3 57 209-267 283-340 (363)
127 1p4c_A L(+)-mandelate dehydrog 98.4 6.1E-07 2.1E-11 85.2 7.9 98 128-258 215-313 (380)
128 3cwo_X Beta/alpha-barrel prote 98.4 6.3E-06 2.2E-10 71.3 13.5 54 209-264 162-215 (237)
129 3kru_A NADH:flavin oxidoreduct 98.3 2.9E-06 9.8E-11 79.5 11.8 56 209-266 265-321 (343)
130 1x1o_A Nicotinate-nucleotide p 98.3 2.6E-06 8.9E-11 77.7 10.7 92 127-259 183-275 (286)
131 1v5x_A PRA isomerase, phosphor 98.3 3.7E-05 1.3E-09 66.7 17.5 185 42-276 8-200 (203)
132 2r14_A Morphinone reductase; H 98.3 4.9E-06 1.7E-10 78.9 12.1 55 209-266 287-342 (377)
133 1nsj_A PRAI, phosphoribosyl an 98.3 6.8E-05 2.3E-09 65.1 18.3 186 42-273 9-203 (205)
134 1mzh_A Deoxyribose-phosphate a 98.3 1E-05 3.4E-10 71.3 12.5 128 46-253 74-205 (225)
135 2gou_A Oxidoreductase, FMN-bin 98.3 9.1E-06 3.1E-10 76.7 12.9 55 209-266 281-336 (365)
136 4aaj_A N-(5'-phosphoribosyl)an 98.2 0.00013 4.4E-09 64.4 19.0 190 30-274 21-225 (228)
137 1ps9_A 2,4-dienoyl-COA reducta 98.2 1.3E-05 4.5E-10 81.2 14.4 55 210-266 269-324 (671)
138 1vyr_A Pentaerythritol tetrani 98.2 1.4E-05 4.9E-10 75.3 13.2 55 209-266 282-337 (364)
139 3l5a_A NADH/flavin oxidoreduct 98.2 1E-05 3.5E-10 77.7 12.0 52 211-265 306-359 (419)
140 1o4u_A Type II quinolic acid p 98.2 3.2E-06 1.1E-10 77.0 7.3 95 126-259 179-275 (285)
141 2b7n_A Probable nicotinate-nuc 98.1 5.6E-06 1.9E-10 75.1 8.5 94 127-259 169-264 (273)
142 3tdn_A FLR symmetric alpha-bet 98.1 1.2E-05 4E-10 71.5 9.8 52 208-261 66-117 (247)
143 1qap_A Quinolinic acid phospho 98.1 1.9E-05 6.6E-10 72.3 10.5 91 126-259 195-287 (296)
144 3iwp_A Copper homeostasis prot 98.1 0.00042 1.4E-08 62.8 18.9 165 43-252 47-238 (287)
145 2hsa_B 12-oxophytodienoate red 98.0 5.5E-05 1.9E-09 72.2 13.6 55 209-266 307-362 (402)
146 3m47_A Orotidine 5'-phosphate 98.0 6.2E-05 2.1E-09 66.4 12.9 47 229-277 179-227 (228)
147 3gka_A N-ethylmaleimide reduct 98.0 7.6E-05 2.6E-09 70.2 14.2 51 213-266 279-330 (361)
148 1qpo_A Quinolinate acid phosph 98.0 1.7E-05 6E-10 72.2 9.4 95 126-259 181-276 (284)
149 3tqv_A Nicotinate-nucleotide p 98.0 2.1E-05 7.3E-10 71.5 9.9 94 125-259 184-277 (287)
150 4ab4_A Xenobiotic reductase B; 98.0 7.7E-05 2.6E-09 70.2 13.7 50 213-265 271-321 (362)
151 3k30_A Histamine dehydrogenase 98.0 8E-05 2.7E-09 75.7 14.7 55 209-265 282-337 (690)
152 1icp_A OPR1, 12-oxophytodienoa 98.0 4.2E-05 1.4E-09 72.4 11.8 51 213-266 293-344 (376)
153 2jbm_A Nicotinate-nucleotide p 98.0 1.2E-05 4E-10 73.9 7.5 93 128-259 185-279 (299)
154 1eix_A Orotidine 5'-monophosph 98.0 9.3E-05 3.2E-09 65.9 12.9 58 213-273 173-242 (245)
155 2yyu_A Orotidine 5'-phosphate 97.9 0.00014 4.9E-09 64.7 13.5 58 213-273 167-236 (246)
156 3vk5_A MOEO5; TIM barrel, tran 97.9 2E-05 6.8E-10 71.2 7.8 50 208-259 212-263 (286)
157 3gnn_A Nicotinate-nucleotide p 97.9 4.7E-05 1.6E-09 69.5 10.2 94 125-259 195-288 (298)
158 1dbt_A Orotidine 5'-phosphate 97.9 9.7E-05 3.3E-09 65.5 12.0 59 213-274 166-236 (239)
159 3l0g_A Nicotinate-nucleotide p 97.9 5.4E-05 1.9E-09 69.0 10.2 93 126-259 194-286 (300)
160 3paj_A Nicotinate-nucleotide p 97.9 5.7E-05 1.9E-09 69.6 10.5 93 126-259 218-310 (320)
161 3c2e_A Nicotinate-nucleotide p 97.9 1.5E-05 5.2E-10 73.0 6.4 94 127-259 186-284 (294)
162 3kts_A Glycerol uptake operon 97.8 0.00069 2.4E-08 57.9 15.6 162 42-259 16-186 (192)
163 1o94_A Tmadh, trimethylamine d 97.8 0.00014 4.9E-09 74.4 13.2 56 209-266 279-335 (729)
164 3oa3_A Aldolase; structural ge 97.8 0.00024 8.2E-09 64.5 12.9 32 220-253 233-264 (288)
165 2cu0_A Inosine-5'-monophosphat 97.8 7.9E-05 2.7E-09 72.8 10.3 128 105-258 231-363 (486)
166 1pii_A N-(5'phosphoribosyl)ant 97.8 0.00033 1.1E-08 67.7 14.4 219 38-275 160-452 (452)
167 3ve9_A Orotidine-5'-phosphate 97.8 0.00021 7.1E-09 62.4 11.3 60 213-276 142-204 (215)
168 3ru6_A Orotidine 5'-phosphate 97.7 0.00076 2.6E-08 61.7 15.0 46 228-274 196-252 (303)
169 4dbe_A Orotidine 5'-phosphate 97.7 0.001 3.4E-08 58.3 14.9 46 228-274 162-209 (222)
170 1vqt_A Orotidine 5'-phosphate 97.7 0.00022 7.5E-09 62.2 10.5 54 214-272 149-212 (213)
171 1twd_A Copper homeostasis prot 97.7 0.0048 1.7E-07 54.9 19.1 167 43-253 9-199 (256)
172 3ngj_A Deoxyribose-phosphate a 97.7 0.0003 1E-08 62.2 10.7 32 220-253 199-230 (239)
173 1ka9_F Imidazole glycerol phos 97.6 0.00012 4.2E-09 64.7 8.2 50 209-260 63-112 (252)
174 2w6r_A Imidazole glycerol phos 97.6 0.00025 8.5E-09 63.3 9.8 48 208-257 61-108 (266)
175 1ub3_A Aldolase protein; schif 97.6 0.00044 1.5E-08 60.6 10.6 36 220-257 175-212 (220)
176 3r12_A Deoxyribose-phosphate a 97.6 0.00073 2.5E-08 60.5 12.1 32 220-253 215-246 (260)
177 1thf_D HISF protein; thermophI 97.6 0.00022 7.4E-09 63.2 8.7 50 209-260 62-111 (253)
178 3tfx_A Orotidine 5'-phosphate 97.6 0.0014 4.8E-08 58.7 13.8 49 228-277 182-241 (259)
179 1qo2_A Molecule: N-((5-phospho 97.5 0.00015 5E-09 64.0 6.3 52 208-262 61-112 (241)
180 3ndo_A Deoxyribose-phosphate a 97.5 0.00035 1.2E-08 61.6 8.5 32 220-253 189-220 (231)
181 1ofd_A Ferredoxin-dependent gl 97.5 0.0004 1.4E-08 75.2 10.6 119 113-258 996-1134(1520)
182 3fok_A Uncharacterized protein 97.5 0.0011 3.6E-08 60.5 11.7 60 214-274 230-297 (307)
183 3tjx_A Dihydroorotate dehydrog 97.4 7.6E-05 2.6E-09 69.9 4.2 76 210-290 265-342 (354)
184 2bdq_A Copper homeostasis prot 97.4 0.0027 9.1E-08 55.5 13.6 176 45-263 11-218 (224)
185 1ea0_A Glutamate synthase [NAD 97.4 0.00041 1.4E-08 75.0 9.7 120 113-257 961-1098(1479)
186 3ih1_A Methylisocitrate lyase; 97.4 0.015 5.3E-07 53.1 18.9 177 40-258 34-249 (305)
187 1n7k_A Deoxyribose-phosphate a 97.3 0.00075 2.6E-08 59.6 8.8 39 216-256 187-227 (234)
188 3b8i_A PA4872 oxaloacetate dec 97.3 0.0067 2.3E-07 55.1 14.8 174 41-259 27-241 (287)
189 1vkf_A Glycerol uptake operon 97.3 0.0063 2.2E-07 51.7 13.4 37 211-253 142-178 (188)
190 3aty_A Tcoye, prostaglandin F2 97.2 0.0011 3.6E-08 62.8 9.2 52 211-266 298-350 (379)
191 3lab_A Putative KDPG (2-keto-3 97.2 0.0028 9.5E-08 55.2 11.1 113 93-250 16-137 (217)
192 1vhc_A Putative KHG/KDPG aldol 97.2 0.018 6.2E-07 50.3 16.5 126 81-251 8-136 (224)
193 1h5y_A HISF; histidine biosynt 97.2 0.00067 2.3E-08 59.4 7.2 49 210-260 66-114 (253)
194 3tr2_A Orotidine 5'-phosphate 97.2 0.0025 8.6E-08 56.4 10.6 45 228-273 182-237 (239)
195 1xg4_A Probable methylisocitra 97.2 0.043 1.5E-06 49.9 19.0 174 41-258 23-241 (295)
196 4a3u_A NCR, NADH\:flavin oxido 97.2 0.0093 3.2E-07 55.8 14.9 51 213-266 278-329 (358)
197 4e38_A Keto-hydroxyglutarate-a 97.1 0.01 3.5E-07 52.2 14.2 124 83-251 27-153 (232)
198 1vzw_A Phosphoribosyl isomeras 97.1 0.0023 7.8E-08 56.2 9.9 46 211-258 65-110 (244)
199 3q94_A Fructose-bisphosphate a 97.1 0.056 1.9E-06 49.0 18.8 194 47-281 37-263 (288)
200 2y88_A Phosphoribosyl isomeras 97.1 0.0024 8.3E-08 55.9 9.7 46 211-258 64-109 (244)
201 1ypf_A GMP reductase; GUAC, pu 97.0 0.011 3.8E-07 54.7 13.6 112 45-166 108-239 (336)
202 1wa3_A 2-keto-3-deoxy-6-phosph 97.0 0.0081 2.8E-07 51.2 11.7 102 106-252 27-131 (205)
203 1gvf_A Tagatose-bisphosphate a 96.9 0.12 4.2E-06 46.7 19.6 195 47-281 34-259 (286)
204 3ldv_A Orotidine 5'-phosphate 96.9 0.0053 1.8E-07 54.9 10.3 141 128-272 69-254 (255)
205 3eoo_A Methylisocitrate lyase; 96.9 0.06 2.1E-06 49.0 17.4 174 41-258 28-245 (298)
206 3r2g_A Inosine 5'-monophosphat 96.9 0.0038 1.3E-07 58.6 9.5 124 91-252 41-169 (361)
207 4fxs_A Inosine-5'-monophosphat 96.9 0.011 3.7E-07 57.8 13.2 113 44-166 232-363 (496)
208 4gj1_A 1-(5-phosphoribosyl)-5- 96.9 0.0023 7.7E-08 56.8 7.7 51 208-260 62-112 (243)
209 2qiw_A PEP phosphonomutase; st 96.9 0.071 2.4E-06 47.5 17.4 170 41-254 26-238 (255)
210 1eep_A Inosine 5'-monophosphat 96.9 0.014 4.7E-07 55.4 13.5 112 45-166 155-285 (404)
211 2ze3_A DFA0005; organic waste 96.9 0.15 5.1E-06 45.9 19.6 172 41-258 22-238 (275)
212 3ffs_A Inosine-5-monophosphate 96.9 0.014 4.7E-07 55.5 13.2 112 45-166 146-275 (400)
213 3khj_A Inosine-5-monophosphate 96.8 0.011 3.9E-07 55.3 12.3 112 45-166 107-236 (361)
214 4avf_A Inosine-5'-monophosphat 96.8 0.017 6E-07 56.2 13.9 112 45-166 231-361 (490)
215 1p1x_A Deoxyribose-phosphate a 96.7 0.0075 2.6E-07 54.0 9.3 26 220-247 197-222 (260)
216 1jcn_A Inosine monophosphate d 96.7 0.022 7.6E-07 55.7 13.5 113 45-167 257-388 (514)
217 1ep3_A Dihydroorotate dehydrog 96.7 0.022 7.4E-07 51.6 12.6 118 46-166 115-270 (311)
218 1vrd_A Inosine-5'-monophosphat 96.6 0.028 9.6E-07 54.6 14.0 112 45-166 239-369 (494)
219 1wv2_A Thiazole moeity, thiazo 96.6 0.013 4.5E-07 52.1 10.5 71 43-119 144-214 (265)
220 1wbh_A KHG/KDPG aldolase; lyas 96.6 0.097 3.3E-06 45.2 15.7 124 83-251 9-135 (214)
221 2a4a_A Deoxyribose-phosphate a 96.6 0.009 3.1E-07 54.0 9.2 26 220-247 224-249 (281)
222 1vcv_A Probable deoxyribose-ph 96.5 0.024 8.2E-07 49.6 11.6 32 221-254 184-222 (226)
223 3sgz_A Hydroxyacid oxidase 2; 96.5 0.02 6.9E-07 53.4 11.7 87 79-166 204-301 (352)
224 3iv3_A Tagatose 1,6-diphosphat 96.5 0.022 7.4E-07 52.7 11.5 45 213-259 237-287 (332)
225 3tsm_A IGPS, indole-3-glycerol 96.5 0.027 9.2E-07 50.7 11.9 84 209-299 108-199 (272)
226 3lye_A Oxaloacetate acetyl hyd 96.5 0.25 8.4E-06 45.1 18.2 195 20-258 6-253 (307)
227 1rvg_A Fructose-1,6-bisphospha 96.5 0.35 1.2E-05 44.1 19.0 196 47-281 33-280 (305)
228 4fo4_A Inosine 5'-monophosphat 96.4 0.04 1.4E-06 51.7 13.0 124 91-252 45-177 (366)
229 1mxs_A KDPG aldolase; 2-keto-3 96.4 0.072 2.5E-06 46.5 13.6 123 84-251 20-145 (225)
230 2v5j_A 2,4-dihydroxyhept-2-ENE 96.3 0.38 1.3E-05 43.4 18.7 186 30-255 30-261 (287)
231 1zlp_A PSR132, petal death pro 96.2 0.55 1.9E-05 43.0 19.1 174 41-258 45-263 (318)
232 2c6q_A GMP reductase 2; TIM ba 96.2 0.063 2.2E-06 50.0 13.0 113 45-167 120-253 (351)
233 2agk_A 1-(5-phosphoribosyl)-5- 96.2 0.014 4.7E-07 52.2 8.0 46 209-258 64-109 (260)
234 3qw3_A Orotidine-5-phosphate d 96.2 0.08 2.7E-06 47.1 13.0 168 82-274 64-250 (255)
235 2qr6_A IMP dehydrogenase/GMP r 96.2 0.043 1.5E-06 51.8 11.9 117 45-166 168-306 (393)
236 3n9r_A Fructose-bisphosphate a 96.2 0.41 1.4E-05 43.6 17.8 195 47-281 33-282 (307)
237 2isw_A Putative fructose-1,6-b 96.1 0.82 2.8E-05 41.9 20.0 178 47-257 34-260 (323)
238 1vc4_A Indole-3-glycerol phosp 96.1 0.05 1.7E-06 48.4 11.2 81 209-297 94-182 (254)
239 1yxy_A Putative N-acetylmannos 96.1 0.084 2.9E-06 45.7 12.5 113 44-166 90-215 (234)
240 1s2w_A Phosphoenolpyruvate pho 96.0 0.48 1.6E-05 43.0 17.8 173 41-258 25-244 (295)
241 4eiv_A Deoxyribose-phosphate a 96.0 0.043 1.5E-06 49.7 10.5 21 221-243 231-252 (297)
242 3o07_A Pyridoxine biosynthesis 96.0 0.037 1.3E-06 49.7 9.8 145 10-180 55-244 (291)
243 1yya_A Triosephosphate isomera 96.0 0.058 2E-06 47.9 11.0 41 221-264 204-245 (250)
244 1gox_A (S)-2-hydroxy-acid oxid 95.9 0.07 2.4E-06 50.0 11.9 86 80-166 213-309 (370)
245 1zfj_A Inosine monophosphate d 95.9 0.052 1.8E-06 52.6 11.4 113 45-167 235-366 (491)
246 3usb_A Inosine-5'-monophosphat 95.9 0.075 2.6E-06 52.0 12.5 112 45-166 258-388 (511)
247 2i9e_A Triosephosphate isomera 95.9 0.026 9E-07 50.3 8.4 41 221-264 202-243 (259)
248 3r8r_A Transaldolase; pentose 95.8 0.41 1.4E-05 41.3 15.6 176 41-257 6-191 (212)
249 1aw2_A Triosephosphate isomera 95.8 0.051 1.8E-06 48.4 9.9 42 222-266 207-249 (256)
250 3s1x_A Probable transaldolase; 95.7 0.57 2E-05 40.7 16.1 193 41-274 6-214 (223)
251 3vk5_A MOEO5; TIM barrel, tran 95.7 0.012 4.2E-07 53.0 5.4 82 43-134 181-272 (286)
252 3qw4_B UMP synthase; N-termina 95.7 0.26 9E-06 47.4 15.2 79 213-294 185-275 (453)
253 2yw3_A 4-hydroxy-2-oxoglutarat 95.6 0.17 5.9E-06 43.4 12.5 120 85-251 8-130 (207)
254 3igs_A N-acetylmannosamine-6-p 95.5 0.046 1.6E-06 47.9 8.4 88 40-133 134-223 (232)
255 3qja_A IGPS, indole-3-glycerol 95.5 0.073 2.5E-06 47.8 9.7 80 210-296 102-189 (272)
256 1tre_A Triosephosphate isomera 95.4 0.12 4E-06 46.0 10.8 43 221-266 204-247 (255)
257 1vcf_A Isopentenyl-diphosphate 95.4 0.078 2.7E-06 48.8 10.0 85 81-166 171-285 (332)
258 3q58_A N-acetylmannosamine-6-p 95.4 0.052 1.8E-06 47.5 8.3 88 40-133 134-223 (229)
259 2ffc_A Orotidine 5-monophospha 95.3 0.23 8E-06 46.2 13.0 58 213-273 280-345 (353)
260 2hjp_A Phosphonopyruvate hydro 95.3 1.5 5.3E-05 39.5 18.3 173 41-258 21-241 (290)
261 2jgq_A Triosephosphate isomera 95.3 0.11 3.9E-06 45.5 10.3 40 221-263 188-228 (233)
262 1nvm_A HOA, 4-hydroxy-2-oxoval 95.3 0.61 2.1E-05 43.0 15.8 169 46-251 34-225 (345)
263 3fa4_A 2,3-dimethylmalate lyas 95.3 1.2 4E-05 40.5 17.2 175 41-258 24-245 (302)
264 2htm_A Thiazole biosynthesis p 95.3 0.094 3.2E-06 46.8 9.5 71 43-119 133-205 (268)
265 1dxe_A 2-dehydro-3-deoxy-galac 95.2 1.5 5E-05 38.7 19.3 175 41-255 26-240 (256)
266 3l21_A DHDPS, dihydrodipicolin 95.1 1.5 5.1E-05 39.7 17.6 92 46-144 40-146 (304)
267 2ftp_A Hydroxymethylglutaryl-C 95.1 1.3 4.4E-05 40.0 17.1 166 46-252 34-235 (302)
268 1aj0_A DHPS, dihydropteroate s 95.1 0.29 9.9E-06 44.1 12.5 85 46-138 42-134 (282)
269 1mo0_A TIM, triosephosphate is 95.1 0.12 4.1E-06 46.4 9.7 42 221-265 222-264 (275)
270 3vav_A 3-methyl-2-oxobutanoate 95.0 1.3 4.3E-05 39.7 16.4 98 41-143 35-146 (275)
271 1p4c_A L(+)-mandelate dehydrog 95.0 0.091 3.1E-06 49.4 9.4 85 80-166 213-307 (380)
272 4af0_A Inosine-5'-monophosphat 95.0 0.26 8.7E-06 48.3 12.4 114 45-168 283-415 (556)
273 1y0e_A Putative N-acetylmannos 94.9 0.056 1.9E-06 46.4 7.1 92 41-133 125-217 (223)
274 2yc6_A Triosephosphate isomera 94.9 0.56 1.9E-05 41.7 13.6 36 221-259 208-244 (257)
275 1r2r_A TIM, triosephosphate is 94.9 0.12 4.2E-06 45.7 9.3 39 221-262 203-242 (248)
276 1o5x_A TIM, triosephosphate is 94.9 0.24 8.3E-06 43.8 11.2 42 221-266 203-245 (248)
277 3pm6_A Putative fructose-bisph 94.9 2.2 7.5E-05 38.8 20.1 174 47-257 43-256 (306)
278 2i1o_A Nicotinate phosphoribos 94.8 0.13 4.6E-06 48.6 10.0 33 226-259 273-305 (398)
279 3bo9_A Putative nitroalkan dio 94.8 0.52 1.8E-05 43.1 13.8 117 91-251 25-150 (326)
280 1xky_A Dihydrodipicolinate syn 94.8 2.2 7.7E-05 38.4 18.6 83 46-135 37-132 (301)
281 2j27_A Triosephosphate isomera 94.7 0.28 9.4E-06 43.5 11.1 42 221-266 205-247 (250)
282 3tjl_A NADPH dehydrogenase; OL 94.7 0.015 5.2E-07 55.3 3.0 50 214-265 306-359 (407)
283 1jvn_A Glutamine, bifunctional 94.7 0.21 7.2E-06 49.3 11.3 87 45-137 455-547 (555)
284 2btm_A TIM, protein (triosepho 94.6 0.13 4.4E-06 45.7 8.8 39 221-262 204-243 (252)
285 3cpr_A Dihydrodipicolinate syn 94.6 2.1 7.1E-05 38.7 17.2 82 46-134 41-135 (304)
286 1izc_A Macrophomate synthase i 94.6 1.8 6.1E-05 39.9 16.9 86 39-133 47-136 (339)
287 1vhn_A Putative flavin oxidore 94.6 0.061 2.1E-06 49.2 6.8 98 28-133 127-226 (318)
288 3flu_A DHDPS, dihydrodipicolin 94.5 2.6 8.9E-05 37.9 19.0 83 46-135 32-127 (297)
289 2vws_A YFAU, 2-keto-3-deoxy su 94.5 2.4 8.3E-05 37.5 20.8 175 40-254 24-239 (267)
290 1m3u_A 3-methyl-2-oxobutanoate 94.5 2.5 8.5E-05 37.6 17.3 98 41-143 23-134 (264)
291 1m6j_A TIM, TPI, triosephospha 94.5 0.17 5.7E-06 45.2 9.1 39 221-262 212-251 (261)
292 3si9_A DHDPS, dihydrodipicolin 94.4 2.9 9.9E-05 38.0 20.4 83 46-135 47-142 (315)
293 3qze_A DHDPS, dihydrodipicolin 94.3 3.1 0.0001 37.8 20.8 83 46-135 48-143 (314)
294 1oy0_A Ketopantoate hydroxymet 94.3 2 6.9E-05 38.5 15.8 92 41-135 40-147 (281)
295 3sr7_A Isopentenyl-diphosphate 94.2 0.18 6.1E-06 47.2 9.2 138 90-254 84-239 (365)
296 1o66_A 3-methyl-2-oxobutanoate 94.2 2.3 8E-05 38.0 16.0 93 41-135 23-129 (275)
297 2vxn_A Triosephosphate isomera 94.2 0.5 1.7E-05 41.8 11.5 42 221-266 206-248 (251)
298 3gr7_A NADPH dehydrogenase; fl 94.1 0.14 4.8E-06 47.4 8.3 90 28-119 210-305 (340)
299 2wkj_A N-acetylneuraminate lya 94.1 2.7 9.3E-05 37.9 16.7 82 46-134 36-130 (303)
300 1vyr_A Pentaerythritol tetrani 94.1 0.41 1.4E-05 44.6 11.4 117 46-166 165-323 (364)
301 3nvt_A 3-deoxy-D-arabino-heptu 94.0 0.88 3E-05 42.8 13.5 175 46-256 160-350 (385)
302 3iwp_A Copper homeostasis prot 94.0 0.42 1.4E-05 43.1 10.7 27 140-166 40-66 (287)
303 2gou_A Oxidoreductase, FMN-bin 93.9 0.66 2.3E-05 43.2 12.5 118 46-166 165-322 (365)
304 2r8w_A AGR_C_1641P; APC7498, d 93.9 3.8 0.00013 37.5 20.8 83 46-135 59-154 (332)
305 1vli_A Spore coat polysacchari 93.8 1.1 3.6E-05 42.2 13.6 92 74-166 141-248 (385)
306 3na8_A Putative dihydrodipicol 93.7 4 0.00014 37.1 20.3 83 46-135 49-144 (315)
307 1me8_A Inosine-5'-monophosphat 93.6 0.31 1.1E-05 47.5 10.0 112 45-166 244-381 (503)
308 3a5f_A Dihydrodipicolinate syn 93.6 3.8 0.00013 36.7 18.9 84 45-135 25-121 (291)
309 1vs1_A 3-deoxy-7-phosphoheptul 93.6 2.4 8.4E-05 37.9 15.2 175 46-256 56-246 (276)
310 3qz6_A HPCH/HPAI aldolase; str 93.5 3.8 0.00013 36.2 17.4 87 38-134 19-108 (261)
311 2wqp_A Polysialic acid capsule 93.5 1.2 4.2E-05 41.2 13.3 92 74-166 131-236 (349)
312 3g8r_A Probable spore coat pol 93.4 1.7 5.6E-05 40.4 14.0 92 74-166 118-225 (350)
313 1b9b_A TIM, protein (triosepho 93.4 0.27 9.1E-06 43.7 8.3 42 221-265 206-250 (255)
314 3eb2_A Putative dihydrodipicol 93.4 3.5 0.00012 37.1 16.0 82 46-134 29-123 (300)
315 1tx2_A DHPS, dihydropteroate s 93.3 0.47 1.6E-05 43.0 10.0 85 46-137 67-159 (297)
316 3b0p_A TRNA-dihydrouridine syn 93.3 0.28 9.7E-06 45.5 8.7 90 28-120 127-224 (350)
317 2vp8_A Dihydropteroate synthas 93.2 0.46 1.6E-05 43.5 9.8 84 46-137 69-160 (318)
318 1ney_A TIM, triosephosphate is 93.2 0.37 1.3E-05 42.6 8.8 41 221-265 202-243 (247)
319 1ydn_A Hydroxymethylglutaryl-C 93.2 1.6 5.6E-05 39.1 13.4 167 46-251 30-230 (295)
320 4a29_A Engineered retro-aldol 93.1 1.4 4.7E-05 39.1 12.4 111 148-299 65-183 (258)
321 1viz_A PCRB protein homolog; s 93.1 0.093 3.2E-06 46.3 4.8 77 32-121 130-211 (240)
322 2v82_A 2-dehydro-3-deoxy-6-pho 93.0 1.9 6.5E-05 36.4 13.1 102 105-251 23-127 (212)
323 3m9y_A Triosephosphate isomera 93.0 1.3 4.3E-05 39.3 12.1 36 221-259 208-244 (254)
324 2vc6_A MOSA, dihydrodipicolina 93.0 4.8 0.00016 36.0 21.2 83 46-135 25-120 (292)
325 3tak_A DHDPS, dihydrodipicolin 93.0 4.8 0.00016 36.0 20.4 83 46-135 26-121 (291)
326 2v9d_A YAGE; dihydrodipicolini 93.0 5.5 0.00019 36.6 19.5 83 46-135 56-151 (343)
327 2ojp_A DHDPS, dihydrodipicolin 92.8 5.1 0.00017 35.9 18.7 83 46-135 26-121 (292)
328 2gjl_A Hypothetical protein PA 92.8 1.2 4.3E-05 40.4 12.3 117 91-251 14-144 (328)
329 3d0c_A Dihydrodipicolinate syn 92.8 4.9 0.00017 36.4 16.1 83 46-135 37-131 (314)
330 3zwt_A Dihydroorotate dehydrog 92.8 0.21 7.2E-06 46.7 7.0 93 27-120 220-326 (367)
331 3e96_A Dihydrodipicolinate syn 92.6 5.6 0.00019 36.0 16.4 83 46-135 37-131 (316)
332 3o1n_A 3-dehydroquinate dehydr 92.6 0.8 2.7E-05 41.1 10.3 113 47-166 57-196 (276)
333 4adt_A Pyridoxine biosynthetic 92.6 0.41 1.4E-05 43.4 8.5 82 141-249 23-104 (297)
334 1xm3_A Thiazole biosynthesis p 92.5 0.6 2E-05 41.5 9.4 71 43-119 135-205 (264)
335 2f6u_A GGGPS, (S)-3-O-geranylg 92.5 0.19 6.5E-06 44.1 5.9 76 31-119 136-216 (234)
336 1twd_A Copper homeostasis prot 92.5 0.71 2.4E-05 40.9 9.6 77 144-253 6-94 (256)
337 2yxg_A DHDPS, dihydrodipicolin 92.4 5.7 0.0002 35.4 18.1 83 46-135 25-120 (289)
338 2wqp_A Polysialic acid capsule 92.2 5.2 0.00018 37.0 15.6 130 82-247 94-231 (349)
339 2yci_X 5-methyltetrahydrofolat 92.2 0.85 2.9E-05 40.8 10.0 89 12-119 10-105 (271)
340 1zco_A 2-dehydro-3-deoxyphosph 92.1 6 0.00021 34.9 16.1 176 46-256 41-231 (262)
341 2rfg_A Dihydrodipicolinate syn 92.1 6.5 0.00022 35.3 18.1 82 46-134 25-119 (297)
342 1z41_A YQJM, probable NADH-dep 92.0 0.39 1.3E-05 44.2 7.8 90 28-119 210-305 (338)
343 2v5b_A Triosephosphate isomera 92.0 3.6 0.00012 36.1 13.6 39 221-263 199-238 (244)
344 2z6i_A Trans-2-enoyl-ACP reduc 91.9 1.7 5.9E-05 39.6 12.0 117 91-251 11-136 (332)
345 1vr6_A Phospho-2-dehydro-3-deo 91.8 3.2 0.00011 38.4 13.7 176 46-257 124-315 (350)
346 1jub_A Dihydroorotate dehydrog 91.8 0.28 9.4E-06 44.4 6.4 90 28-119 159-269 (311)
347 2yr1_A 3-dehydroquinate dehydr 91.5 2 6.9E-05 37.9 11.7 111 46-166 36-176 (257)
348 1w8s_A FBP aldolase, fructose- 91.5 1.3 4.5E-05 39.2 10.4 112 46-166 96-231 (263)
349 2ehh_A DHDPS, dihydrodipicolin 91.4 7.7 0.00026 34.7 18.2 83 46-135 25-120 (294)
350 3s5o_A 4-hydroxy-2-oxoglutarat 91.3 8 0.00027 34.8 20.1 83 46-135 39-136 (307)
351 1i4n_A Indole-3-glycerol phosp 91.2 1.6 5.6E-05 38.5 10.6 85 209-300 89-182 (251)
352 3ih1_A Methylisocitrate lyase; 91.1 2.7 9.3E-05 38.1 12.2 118 46-166 108-243 (305)
353 1xky_A Dihydrodipicolinate syn 91.1 1.6 5.3E-05 39.5 10.7 62 212-274 70-136 (301)
354 2dqw_A Dihydropteroate synthas 91.1 3.6 0.00012 37.1 12.9 84 45-137 55-146 (294)
355 1p0k_A Isopentenyl-diphosphate 91.0 0.89 3.1E-05 41.8 9.1 78 43-120 190-279 (349)
356 1xg4_A Probable methylisocitra 90.9 1.8 6.3E-05 39.1 10.9 118 46-166 98-235 (295)
357 1f76_A Dihydroorotate dehydrog 90.8 0.53 1.8E-05 43.1 7.3 92 28-120 212-317 (336)
358 3b4u_A Dihydrodipicolinate syn 90.6 9.1 0.00031 34.2 19.5 82 46-134 28-123 (294)
359 2nli_A Lactate oxidase; flavoe 90.6 0.76 2.6E-05 42.9 8.2 74 42-120 237-312 (368)
360 2qjg_A Putative aldolase MJ040 90.5 1.1 3.9E-05 39.4 9.1 115 45-166 102-237 (273)
361 3qst_A Triosephosphate isomera 90.4 2.3 7.8E-05 37.7 10.7 34 221-257 207-241 (255)
362 3eoo_A Methylisocitrate lyase; 90.4 2.3 7.9E-05 38.5 11.0 118 46-166 102-239 (298)
363 3krs_A Triosephosphate isomera 90.3 3.9 0.00013 36.4 12.3 37 221-261 226-263 (271)
364 3to5_A CHEY homolog; alpha(5)b 90.3 4.4 0.00015 31.8 11.5 55 209-270 72-129 (134)
365 3h5d_A DHDPS, dihydrodipicolin 90.2 10 0.00035 34.2 21.4 84 45-135 31-128 (311)
366 3noy_A 4-hydroxy-3-methylbut-2 90.2 3.4 0.00012 38.2 12.1 161 93-278 30-206 (366)
367 3qze_A DHDPS, dihydrodipicolin 90.1 1.7 5.8E-05 39.5 10.0 54 220-274 91-147 (314)
368 3gdm_A Orotidine 5'-phosphate 90.1 0.34 1.2E-05 43.3 5.1 39 237-275 219-259 (267)
369 3g3d_A UMP synthase, uridine 5 90.0 0.21 7.2E-06 45.7 3.8 38 238-275 267-306 (312)
370 3flu_A DHDPS, dihydrodipicolin 90.0 2.1 7.2E-05 38.5 10.5 63 211-274 64-131 (297)
371 3th6_A Triosephosphate isomera 89.9 2.3 7.8E-05 37.5 10.3 35 221-258 203-238 (249)
372 3tr9_A Dihydropteroate synthas 89.9 11 0.00039 34.2 16.8 85 46-137 53-148 (314)
373 1f6k_A N-acetylneuraminate lya 89.8 10 0.00036 33.8 19.1 82 46-134 28-123 (293)
374 2yxg_A DHDPS, dihydrodipicolin 89.8 1.7 6E-05 38.9 9.8 63 211-274 57-124 (289)
375 3cpr_A Dihydrodipicolinate syn 89.7 2 6.8E-05 38.9 10.1 62 212-274 74-140 (304)
376 1tv5_A Dhodehase, dihydroorota 89.7 0.58 2E-05 44.9 6.7 91 28-119 297-400 (443)
377 3tak_A DHDPS, dihydrodipicolin 89.6 2.2 7.5E-05 38.3 10.3 63 211-274 58-125 (291)
378 3eww_A Ompdecase, orotidine-5' 89.6 0.26 9E-06 43.9 4.0 39 237-275 214-254 (260)
379 1o5k_A DHDPS, dihydrodipicolin 89.6 11 0.00039 33.8 21.5 92 46-144 37-143 (306)
380 2ehh_A DHDPS, dihydrodipicolin 89.6 1.8 6.2E-05 38.9 9.7 63 211-274 57-124 (294)
381 2e6f_A Dihydroorotate dehydrog 89.4 0.56 1.9E-05 42.4 6.2 90 28-119 161-271 (314)
382 3na8_A Putative dihydrodipicol 89.4 1.7 5.9E-05 39.5 9.5 63 211-274 81-148 (315)
383 4gbu_A NADPH dehydrogenase 1; 89.3 0.26 8.8E-06 46.6 3.9 50 215-266 312-362 (400)
384 1o5k_A DHDPS, dihydrodipicolin 89.3 1.9 6.5E-05 39.0 9.6 63 211-274 69-136 (306)
385 2r8w_A AGR_C_1641P; APC7498, d 89.3 1.9 6.6E-05 39.5 9.8 63 211-274 91-158 (332)
386 2v9d_A YAGE; dihydrodipicolini 89.2 2.1 7.1E-05 39.5 10.0 63 211-274 88-155 (343)
387 3si9_A DHDPS, dihydrodipicolin 89.2 2.1 7.1E-05 39.0 9.9 63 211-274 79-146 (315)
388 3vzx_A Heptaprenylglyceryl pho 89.2 0.9 3.1E-05 39.6 7.0 42 80-122 167-210 (228)
389 2i14_A Nicotinate-nucleotide p 89.1 1 3.6E-05 42.4 8.0 32 226-259 271-302 (395)
390 2fiq_A Putative tagatose 6-pho 89.1 6.9 0.00023 37.1 13.6 49 209-258 236-287 (420)
391 3l21_A DHDPS, dihydrodipicolin 89.1 2 7E-05 38.8 9.7 63 211-274 72-139 (304)
392 1m5w_A Pyridoxal phosphate bio 89.1 9.6 0.00033 33.2 13.4 191 45-273 28-239 (243)
393 2rfg_A Dihydrodipicolinate syn 89.0 1.9 6.3E-05 38.9 9.3 62 212-274 58-124 (297)
394 2ojp_A DHDPS, dihydrodipicolin 89.0 2.6 8.9E-05 37.8 10.3 63 211-274 58-125 (292)
395 3tr9_A Dihydropteroate synthas 89.0 4.7 0.00016 36.7 11.9 112 41-166 111-274 (314)
396 3daq_A DHDPS, dihydrodipicolin 88.9 12 0.00042 33.3 21.1 82 46-134 27-121 (292)
397 3aty_A Tcoye, prostaglandin F2 88.8 3 0.0001 39.0 10.9 116 46-166 178-336 (379)
398 3i65_A Dihydroorotate dehydrog 88.8 0.73 2.5E-05 43.8 6.7 92 28-120 269-373 (415)
399 3dz1_A Dihydrodipicolinate syn 88.8 13 0.00045 33.5 18.9 82 46-134 33-125 (313)
400 3elf_A Fructose-bisphosphate a 88.6 15 0.00051 33.9 15.6 48 209-257 223-281 (349)
401 1vli_A Spore coat polysacchari 88.6 16 0.00054 34.2 16.4 131 81-247 103-243 (385)
402 2cu0_A Inosine-5'-monophosphat 88.6 1.4 4.9E-05 42.4 8.8 110 45-168 230-359 (486)
403 2vc6_A MOSA, dihydrodipicolina 88.5 1.9 6.5E-05 38.7 9.0 63 211-274 57-124 (292)
404 3hgj_A Chromate reductase; TIM 88.5 0.97 3.3E-05 41.7 7.2 72 46-119 243-316 (349)
405 3m5v_A DHDPS, dihydrodipicolin 88.5 13 0.00046 33.2 21.7 83 46-135 32-128 (301)
406 3gk0_A PNP synthase, pyridoxin 88.5 7.4 0.00025 34.6 12.4 189 45-274 56-268 (278)
407 3bw2_A 2-nitropropane dioxygen 88.5 1 3.5E-05 41.8 7.4 73 41-119 151-235 (369)
408 1eye_A DHPS 1, dihydropteroate 88.4 6.4 0.00022 35.2 12.3 84 46-137 33-124 (280)
409 3fa4_A 2,3-dimethylmalate lyas 88.3 8.4 0.00029 34.8 13.1 136 28-165 81-238 (302)
410 1f6k_A N-acetylneuraminate lya 88.3 1.9 6.4E-05 38.8 8.9 63 211-274 61-128 (293)
411 3daq_A DHDPS, dihydrodipicolin 88.3 2.4 8.4E-05 38.0 9.6 61 212-273 60-125 (292)
412 3m5v_A DHDPS, dihydrodipicolin 88.3 2.5 8.4E-05 38.2 9.6 63 211-274 64-132 (301)
413 3kts_A Glycerol uptake operon 88.2 0.43 1.5E-05 40.5 4.2 41 81-121 139-179 (192)
414 3lye_A Oxaloacetate acetyl hyd 88.1 7.5 0.00026 35.3 12.7 136 28-165 89-246 (307)
415 2wkj_A N-acetylneuraminate lya 88.0 2.3 8E-05 38.4 9.3 62 211-273 68-134 (303)
416 3b4u_A Dihydrodipicolinate syn 87.9 2.3 8E-05 38.2 9.2 62 211-273 60-127 (294)
417 4h3d_A 3-dehydroquinate dehydr 87.7 3.7 0.00013 36.2 10.3 111 46-166 36-176 (258)
418 1mzh_A Deoxyribose-phosphate a 87.7 1.4 4.7E-05 38.1 7.3 65 45-118 135-201 (225)
419 2nzl_A Hydroxyacid oxidase 1; 87.4 1.3 4.5E-05 41.6 7.5 62 209-273 240-305 (392)
420 1sfl_A 3-dehydroquinate dehydr 87.4 2.1 7.1E-05 37.4 8.3 111 46-166 21-162 (238)
421 3oix_A Putative dihydroorotate 87.3 1.2 4.1E-05 41.2 7.0 88 28-119 194-302 (345)
422 2pcq_A Putative dihydrodipicol 87.2 15 0.00053 32.5 15.4 66 46-119 23-93 (283)
423 3o63_A Probable thiamine-phosp 87.2 2.5 8.5E-05 37.0 8.7 75 41-119 141-217 (243)
424 3l5l_A Xenobiotic reductase A; 87.1 1.2 4.1E-05 41.3 7.0 72 46-119 250-323 (363)
425 3nav_A Tryptophan synthase alp 87.0 9.3 0.00032 33.9 12.5 109 45-166 115-237 (271)
426 2nv1_A Pyridoxal biosynthesis 86.7 6.2 0.00021 35.4 11.4 127 81-251 10-151 (305)
427 2r14_A Morphinone reductase; H 86.7 0.9 3.1E-05 42.5 5.9 68 46-120 259-327 (377)
428 2vef_A Dihydropteroate synthas 86.7 2.4 8.3E-05 38.6 8.6 85 46-137 37-129 (314)
429 1kbi_A Cytochrome B2, L-LCR; f 86.6 1.5 5.3E-05 42.7 7.7 62 209-273 331-396 (511)
430 3eb2_A Putative dihydrodipicol 86.6 1.4 4.8E-05 39.8 7.0 63 211-274 61-128 (300)
431 1zlp_A PSR132, petal death pro 86.6 7.2 0.00025 35.5 11.7 135 28-166 102-257 (318)
432 3fkr_A L-2-keto-3-deoxyarabona 86.5 4.7 0.00016 36.5 10.4 63 211-274 65-135 (309)
433 2dqw_A Dihydropteroate synthas 85.9 16 0.00054 32.9 13.5 81 105-189 56-150 (294)
434 2rdx_A Mandelate racemase/muco 85.9 16 0.00055 33.6 14.1 47 209-257 225-272 (379)
435 1yad_A Regulatory protein TENI 85.8 1.4 4.8E-05 37.5 6.3 75 41-119 116-190 (221)
436 3qfe_A Putative dihydrodipicol 85.8 20 0.00068 32.4 20.5 67 46-119 36-111 (318)
437 2bdq_A Copper homeostasis prot 85.6 0.99 3.4E-05 39.2 5.1 23 144-166 6-28 (224)
438 3nl6_A Thiamine biosynthetic b 85.6 3.9 0.00013 40.1 10.0 76 41-119 114-207 (540)
439 3f4w_A Putative hexulose 6 pho 85.5 2.7 9.2E-05 35.3 7.9 68 45-119 117-185 (211)
440 2hmc_A AGR_L_411P, dihydrodipi 85.5 22 0.00075 32.6 20.6 67 46-119 51-123 (344)
441 3a5f_A Dihydrodipicolinate syn 85.4 2.1 7.1E-05 38.4 7.4 60 211-271 58-122 (291)
442 3sz8_A 2-dehydro-3-deoxyphosph 85.4 7.2 0.00025 35.0 10.9 141 80-256 79-245 (285)
443 2p10_A MLL9387 protein; putati 85.2 16 0.00053 32.8 12.8 115 45-163 111-256 (286)
444 3d0c_A Dihydrodipicolinate syn 85.2 4.4 0.00015 36.8 9.5 67 211-279 69-140 (314)
445 4ef8_A Dihydroorotate dehydrog 85.0 0.9 3.1E-05 42.2 4.9 90 28-119 194-304 (354)
446 2zbt_A Pyridoxal biosynthesis 85.0 3.8 0.00013 36.5 9.0 43 80-122 195-240 (297)
447 3h5d_A DHDPS, dihydrodipicolin 84.9 5.8 0.0002 35.9 10.2 63 211-274 64-132 (311)
448 1dos_A Aldolase class II; lyas 84.9 24 0.00083 32.6 18.9 48 209-257 237-293 (358)
449 2hmc_A AGR_L_411P, dihydrodipi 84.8 5.6 0.00019 36.6 10.2 53 220-273 91-147 (344)
450 3k13_A 5-methyltetrahydrofolat 84.8 2.7 9.2E-05 38.1 7.8 62 46-119 41-111 (300)
451 3gl9_A Response regulator; bet 84.6 10 0.00035 28.0 11.5 57 209-272 61-120 (122)
452 3txv_A Probable tagatose 6-pho 84.6 23 0.00077 33.8 14.3 47 210-257 244-294 (450)
453 2czd_A Orotidine 5'-phosphate 84.2 5.2 0.00018 33.7 9.1 105 46-166 69-185 (208)
454 2y5s_A DHPS, dihydropteroate s 84.2 3.8 0.00013 37.0 8.5 83 46-136 50-139 (294)
455 3sz8_A 2-dehydro-3-deoxyphosph 84.1 14 0.00048 33.0 12.2 92 74-166 117-243 (285)
456 2fli_A Ribulose-phosphate 3-ep 84.1 6.6 0.00022 33.0 9.7 57 210-270 50-107 (220)
457 2h9a_B CO dehydrogenase/acetyl 84.0 16 0.00054 33.1 12.6 139 12-160 47-199 (310)
458 3nvt_A 3-deoxy-D-arabino-heptu 84.0 5.8 0.0002 37.2 10.0 106 105-252 160-283 (385)
459 1mdl_A Mandelate racemase; iso 84.0 21 0.00072 32.5 13.8 47 209-257 228-275 (359)
460 3fkr_A L-2-keto-3-deoxyarabona 83.9 5.1 0.00017 36.2 9.4 67 46-119 33-108 (309)
461 2qiw_A PEP phosphonomutase; st 83.9 6.9 0.00024 34.5 10.0 129 28-165 81-235 (255)
462 3inp_A D-ribulose-phosphate 3- 83.9 3.9 0.00013 35.9 8.3 88 99-187 38-136 (246)
463 3qfe_A Putative dihydrodipicol 83.9 5.4 0.00018 36.2 9.5 63 211-274 68-137 (318)
464 1zco_A 2-dehydro-3-deoxyphosph 83.8 8.3 0.00028 34.0 10.5 107 105-252 41-165 (262)
465 3e96_A Dihydrodipicolinate syn 83.8 2.8 9.7E-05 38.0 7.6 61 211-274 69-135 (316)
466 2f7f_A Nicotinate phosphoribos 83.7 3.5 0.00012 40.0 8.5 31 226-257 289-321 (494)
467 3vkj_A Isopentenyl-diphosphate 83.6 1.4 4.9E-05 41.1 5.6 139 91-254 58-220 (368)
468 3tml_A 2-dehydro-3-deoxyphosph 83.6 13 0.00044 33.4 11.7 141 80-257 76-247 (288)
469 3ble_A Citramalate synthase fr 83.4 26 0.0009 31.8 15.4 63 46-120 45-115 (337)
470 1xi3_A Thiamine phosphate pyro 83.4 1.9 6.3E-05 36.2 5.9 74 42-119 115-188 (215)
471 2yxb_A Coenzyme B12-dependent 83.4 8.1 0.00028 31.3 9.6 39 210-251 87-127 (161)
472 2ovl_A Putative racemase; stru 83.1 20 0.00068 32.9 13.3 47 209-257 230-277 (371)
473 4hb7_A Dihydropteroate synthas 82.7 14 0.00049 32.7 11.5 83 46-136 34-124 (270)
474 1eye_A DHPS 1, dihydropteroate 82.5 24 0.00083 31.4 13.1 29 139-167 80-109 (280)
475 2oz8_A MLL7089 protein; struct 82.5 15 0.0005 34.1 12.2 45 209-256 231-277 (389)
476 3fs2_A 2-dehydro-3-deoxyphosph 82.4 12 0.00042 33.7 11.1 141 80-257 100-265 (298)
477 3luf_A Two-component system re 82.4 23 0.00078 30.4 16.9 170 81-273 64-244 (259)
478 3cwo_X Beta/alpha-barrel prote 82.4 12 0.00041 31.0 10.7 85 45-135 133-222 (237)
479 1k66_A Phytochrome response re 82.2 14 0.00047 27.8 11.0 59 209-274 77-138 (149)
480 2ze3_A DFA0005; organic waste 81.7 13 0.00046 33.0 11.0 114 45-165 95-231 (275)
481 3s5o_A 4-hydroxy-2-oxoglutarat 81.4 5.7 0.00019 35.8 8.6 63 211-274 71-140 (307)
482 1gte_A Dihydropyrimidine dehyd 81.0 3.2 0.00011 43.8 7.8 89 28-120 704-815 (1025)
483 3ovp_A Ribulose-phosphate 3-ep 81.0 4.7 0.00016 34.8 7.6 88 99-187 15-114 (228)
484 2nql_A AGR_PAT_674P, isomerase 80.7 12 0.00041 34.6 10.9 45 209-255 247-292 (388)
485 1qop_A Tryptophan synthase alp 80.6 28 0.00094 30.4 12.8 109 45-166 112-234 (268)
486 2hjp_A Phosphonopyruvate hydro 80.5 25 0.00087 31.4 12.5 94 139-254 15-112 (290)
487 3f6p_A Transcriptional regulat 80.4 15 0.0005 26.9 11.4 56 210-272 62-117 (120)
488 2pgw_A Muconate cycloisomerase 80.2 15 0.0005 34.0 11.3 109 46-165 153-270 (384)
489 3eul_A Possible nitrate/nitrit 80.0 18 0.00061 27.6 12.4 60 209-275 76-136 (152)
490 3g8r_A Probable spore coat pol 79.9 10 0.00036 35.0 9.9 74 137-250 89-166 (350)
491 3kht_A Response regulator; PSI 79.8 17 0.00059 27.3 11.6 59 209-274 66-128 (144)
492 1mdl_A Mandelate racemase; iso 79.4 24 0.00082 32.1 12.4 111 46-166 150-270 (359)
493 1k68_A Phytochrome response re 79.3 17 0.00057 26.9 11.0 58 209-273 70-130 (140)
494 3r8r_A Transaldolase; pentose 79.3 6.2 0.00021 33.8 7.7 84 82-166 90-186 (212)
495 3gka_A N-ethylmaleimide reduct 79.2 1.8 6.2E-05 40.2 4.6 61 46-120 254-315 (361)
496 3ozy_A Putative mandelate race 79.1 22 0.00075 32.9 12.2 111 46-166 157-277 (389)
497 3gt7_A Sensor protein; structu 79.0 20 0.00067 27.6 12.3 61 209-276 66-129 (154)
498 3o6c_A PNP synthase, pyridoxin 78.9 33 0.0011 30.1 12.7 191 45-257 28-240 (260)
499 3dz1_A Dihydrodipicolinate syn 78.8 8 0.00028 34.9 8.8 57 212-270 66-126 (313)
500 1a3w_A Pyruvate kinase; allost 78.8 31 0.0011 33.4 13.3 142 106-275 198-355 (500)
No 1
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=100.00 E-value=2.5e-48 Score=348.39 Aligned_cols=277 Identities=61% Similarity=1.009 Sum_probs=244.7
Q ss_pred eecCCccccCCCHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHHHHHH
Q 037779 33 MLRGGVIMDVVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEA 112 (310)
Q Consensus 33 ~l~~g~i~~~~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~ 112 (310)
+|++|.|+++.++++|+.++++||.+++.|.++|+|+|.++|..++++++.|++|++.+++||+.+++++|+.++|++++
T Consensus 9 ~~~~~vimdv~~~eqa~iae~aGa~av~~l~~~p~d~r~~gGv~Rm~dp~~I~~I~~aVsIPVm~k~righ~~EAqilea 88 (291)
T 3o07_A 9 MLKGGVIMDVVTPEQAKIAEKSGACAVMALESIPADMRKSGKVCRMSDPKMIKDIMNSVSIPVMAKVRIGHFVEAQIIEA 88 (291)
T ss_dssp -CTTCEEEEESSHHHHHHHHHHTCSEEEECSSCHHHHHTTTCCCCCCCHHHHHHHHTTCSSCEEEEEETTCHHHHHHHHH
T ss_pred cccCCeeeecCCHHHHHHHHHhCchhhhhccCCCchhhhcCCccccCCHHHHHHHHHhCCCCeEEEEecCcHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCeeeecCCCChhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceeccc
Q 037779 113 IGVDYVDESEVLTPADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLR 192 (310)
Q Consensus 113 aGad~v~~~~~~~~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~ 192 (310)
+|+|+|..++.++|.+....+.++.++++++++++|+.|+.++++.||++|++.|+.+||+..+++++.|.++.+++.+.
T Consensus 89 ~GaD~IDesevltpad~~~~I~k~~f~vpfv~~~~~l~EAlrri~eGA~mIrTtge~gtg~v~~av~h~r~~~~~i~~l~ 168 (291)
T 3o07_A 89 LEVDYIDESEVLTPADWTHHIEKDKFKVPFVCGAKDLGEALRRINEGAAMIRTKGEAGTGDVSEAVKHIRRITEEIKACQ 168 (291)
T ss_dssp TTCSEEEEETTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHHTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHH
T ss_pred cCCCEEecccCCCHHHHHHHhhhhcCCCcEEeeCCCHHHHHHHHHCCCCEEEecCcCCCccHHHHHHHHHHHHHHHHHHH
Confidence 99999988888899888888877668899999999999999999999999999999999999999999999999999888
Q ss_pred cc-CchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHH
Q 037779 193 NM-DDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQA 271 (310)
Q Consensus 193 ~~-~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~ 271 (310)
.+ +.+.+..+++...++|++++.+++..++||++|++|||+|++++.+++++|||||+|||++++++||..++++|.++
T Consensus 169 g~~t~~el~~~a~~~~ad~elI~~Ike~~~IPVV~IAnGGI~TpedA~~~le~GaDGVmVGrAI~~s~DP~~~Akafv~A 248 (291)
T 3o07_A 169 QLKSEDDIAKVAEEMRVPVSLLKDVLEKGKLPVVNFAAGGVATPADAALLMQLGCDGVFVGSGIFKSSNPVRLATAVVEA 248 (291)
T ss_dssp TCCCHHHHHHHHHHHTSCHHHHHHHHHHTSCSSCEEBCSSCCSHHHHHHHHHTTCSCEEECGGGGGSSCHHHHHHHHHHH
T ss_pred cCCCHHHhhhcccccCCCHHHHHHHHHccCCCEEEecCCCCCCHHHHHHHHHhCCCEEEEchHHhCCCCHHHHHHHHHHH
Confidence 88 77666555566678999999999988899987899999999999999999999999999999999999999999999
Q ss_pred HHcCCChhhHHhhhhccCCceeccccccc---h-hhhhhccC
Q 037779 272 VTNYSDPDVLAEVSCGLGEAMVGIDLNDV---K-VERYANRS 309 (310)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~ 309 (310)
+++|.+|.+++|+++.+|++|.||+..+. + -||++.|.
T Consensus 249 v~~~~~~~~~~~~s~~l~~~m~g~~~~~~~~~~~~~~~~~rg 290 (291)
T 3o07_A 249 TTHFDNPSKLLEVSSDLGELMGGVSIESISHASNGVRLSEIG 290 (291)
T ss_dssp HHTTTCHHHHHHHHSSCCCC----------------------
T ss_pred HHhccCHHHHHHHHhcccccccCcchhhhccCchHHHHhhcC
Confidence 99999999999999999999999999988 3 45777663
No 2
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=6.2e-45 Score=335.39 Aligned_cols=287 Identities=66% Similarity=0.977 Sum_probs=240.0
Q ss_pred CccccccceeeecCCccccCCCHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeecccc
Q 037779 23 PFSVKVGLAQMLRGGVIMDVVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIG 102 (310)
Q Consensus 23 p~~~~~~~~~~l~~g~i~~~~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~ 102 (310)
.+..+.++.++|+||.|+++..+++|+.|+++||++|+.|+|+|+|+++|+|+.++++++.+++|++.+++||++|+|++
T Consensus 5 ~~~~~~~~~~~~kgGvI~d~~~~e~A~~ae~aGA~aI~~l~~v~~d~~~~~G~arm~~p~~i~~I~~av~iPV~~K~rig 84 (330)
T 2yzr_A 5 TDLLKKGFAKMVKHGVVMDVTNVEQAQIAEEAGAVAVMALERVPADIRAAGGVARMSDPALIEEIMDAVSIPVMAKCRIG 84 (330)
T ss_dssp CTHHHHHHHHTTTTSEEEEESSHHHHHHHHHHTCSEEEECSSCHHHHC--CCCCCCCCHHHHHHHHHHCSSCEEEEEETT
T ss_pred cHHHHHHHHHHccCCceeeCCHHHHHHHHHHcCCCEEEecCCccccccCCcchhhcCCHHHHHHHHHhcCCCeEEEEeec
Confidence 44567788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHcCCCeeeecCCCChhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHH
Q 037779 103 HFVEAQILEAIGVDYVDESEVLTPADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVR 182 (310)
Q Consensus 103 ~~~~~~~~~~aGad~v~~~~~~~~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~ 182 (310)
|++++|+++++|||+|+++..++|.+....+.++.++.++++.++++.|+.+.+..|+++|.++|+.++++++++++|.|
T Consensus 85 ~~~e~qilea~GaD~Id~s~~l~p~d~~~~i~k~~~~~~~~~~a~~lgea~r~~~~Ga~~i~t~ge~g~~~~ve~v~H~r 164 (330)
T 2yzr_A 85 HTTEALVLEAIGVDMIDESEVLTQADPFFHIYKKKFNVPFVCGARNLGEAVRRIWEGAAMIRTKGEAGTGNIVEAVRHMR 164 (330)
T ss_dssp CHHHHHHHHHTTCSEEEEETTSCCSCSSCCCCGGGCSSCEEEECSSHHHHHHHHHHTCSEEEECCCTTSCCTHHHHHHHH
T ss_pred chHHHHHHHHcCCCEEehhccCCHHHHHHHhhhhhcccchhhccccHHHHHHHHhcCcceeeccCCCCcccchhHHHHHH
Confidence 99999999999999999777777766544444444689999999999999999999999999999999999999999988
Q ss_pred HhhcceecccccCchhHHhhhccCCCcH-------------------------------------HHHHHHHhcCCCCEE
Q 037779 183 SVMGDIRVLRNMDDDEVFTFAKNIAAPY-------------------------------------DLVMQTKQLGRLPVV 225 (310)
Q Consensus 183 ~~~~~~~~l~~~~~d~~~~~~~~~~~~~-------------------------------------~l~~~i~~~~~iPVv 225 (310)
.+..+++.+++.+.+.+...+...+.++ ++++.+++..++||+
T Consensus 165 ~~~~~~~~~s~~~~~El~~~A~~~gadyv~~~~~vt~~~G~~~r~Lg~G~Vf~T~TK~~~~~~~lell~~i~~~~~IPVV 244 (330)
T 2yzr_A 165 LMNEAIAQLQRMTDEEVYGVAKFYANRYAELAKTVREGMGLPATVLENEPIYEGFTLAEIIDGLYEVLLEVKKLGRLPVV 244 (330)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHHGGGGHHHHHHHHHTTSCSCCCTTSEEETTEEHHHHHHHHHHHHHHHHHHTSCSSE
T ss_pred HHHHHHHHhccCCHHHHHHHHHHcCCCEeecccchhhhccccccccccccccCCCcccCCCcchHHHHHHHHHhCCCCeE
Confidence 8777777777766655532111112222 888888887789997
Q ss_pred EEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHcCCChhhHHhhhhccCCceeccccccchh-hh
Q 037779 226 HFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTNYSDPDVLAEVSCGLGEAMVGIDLNDVKV-ER 304 (310)
Q Consensus 226 ~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 304 (310)
.|++|||+|++|+.+++++|||||+|||+|++++||...+++|.++++++.+|.+++|+++.+|++|.||+..+.+. +|
T Consensus 245 ~VAeGGI~Tpeda~~~l~~GaDgV~VGsaI~~a~dP~~aar~l~~ai~~~~~~~~~~~~s~~~~~~m~g~~~~~~~~~~~ 324 (330)
T 2yzr_A 245 NFAAGGVATPADAALMMQLGSDGVFVGSGIFKSENPLERARAIVEATYNYDKPDIVAEVSKNLGEAMKGIDITQISEAEK 324 (330)
T ss_dssp EEECSCCCSHHHHHHHHHTTCSCEEESHHHHTSSCHHHHHHHHHHHHHTTTCHHHHHHHHTTCCCCCCC-----------
T ss_pred EEEECCCCCHHHHHHHHHcCcCEEeeHHHHhcCCCHHHHHHHHHHHHHhcCCHHHHHHHHhcccccCcCccccccChhhH
Confidence 66899999999999999999999999999999999999999999999999999999999999999999999999865 48
Q ss_pred hhccC
Q 037779 305 YANRS 309 (310)
Q Consensus 305 ~~~~~ 309 (310)
++.|.
T Consensus 325 ~~~~~ 329 (330)
T 2yzr_A 325 MQYRG 329 (330)
T ss_dssp -----
T ss_pred hhhcC
Confidence 88773
No 3
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=100.00 E-value=1.6e-41 Score=312.90 Aligned_cols=281 Identities=60% Similarity=0.953 Sum_probs=243.4
Q ss_pred CCccccccceeeecCCccccCCCHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccc
Q 037779 22 SPFSVKVGLAQMLRGGVIMDVVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARI 101 (310)
Q Consensus 22 sp~~~~~~~~~~l~~g~i~~~~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i 101 (310)
++++.+.++.+||+||.+++..++++|+.|+++||++|+.|.+.|+|+++|+|..+..+++.|+++++.+++||+++.++
T Consensus 8 ~~~~~~~~~~~~~kggv~~d~~~~e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~v~iPvl~k~~i 87 (297)
T 4adt_A 8 DSILLKHGWCEMLKGGVIMDVKNVEQAKIAEKAGAIGVMILENIPSELRNTDGVARSVDPLKIEEIRKCISINVLAKVRI 87 (297)
T ss_dssp HHHHHHHHHHHTTTTCEEEEESSHHHHHHHHHHTCSEEEECCCCC-----CCCCCCCCCHHHHHHHHTTCCSEEEEEEET
T ss_pred CcHHHHHhHHHHhcCCcccCCCcHHHHHHHHHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHHHhcCCCEEEeccC
Confidence 34566789999999999999999999999999999999999888889999999667778999999999999999999888
Q ss_pred cchHHHHHHHHcCCCeeeecCCCChhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHH
Q 037779 102 GHFVEAQILEAIGVDYVDESEVLTPADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHV 181 (310)
Q Consensus 102 ~~~~~~~~~~~aGad~v~~~~~~~~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~ 181 (310)
++.+++|.++++|||.|..++.+++.++++.+++++++++++++++|.+|++++.+.|+++|+++|..+|+++.++++|.
T Consensus 88 ~~ide~qil~aaGAD~Id~s~~~~~~~li~~i~~~~~g~~vvv~v~~~~Ea~~a~~~Gad~I~v~g~~gTG~~~~~v~h~ 167 (297)
T 4adt_A 88 GHFVEAQILEELKVDMLDESEVLTMADEYNHINKHKFKTPFVCGCTNLGEALRRISEGASMIRTKGEAGTGNIIEAIKHI 167 (297)
T ss_dssp TCHHHHHHHHHTTCSEEEEETTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHHTCSEEEECCCTTSCCCHHHHHHH
T ss_pred CcHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhCCCCEEEECCCcCCCchHHHHHHH
Confidence 87889999999999999655556777777777776678999999999999999999999999999988888889999999
Q ss_pred HHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCH
Q 037779 182 RSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDP 261 (310)
Q Consensus 182 ~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp 261 (310)
+.+...+|++..++.|.+..+++....++++++.+++..++||+++++|||++++++.+++++|||+|+|||+|++++||
T Consensus 168 ~~~~~eir~l~~~~~d~L~t~~~~~~~~~~ll~~i~~~~~iPVivvA~GGI~t~~dv~~~~~~GAdgVlVGsai~~a~dp 247 (297)
T 4adt_A 168 RTVNNEIKYLCSLDESEVYNFAKKLRAPIDLILLTRKLKRLPVVNFAAGGIATPADAAMCMQLGMDGVFVGSGIFESENP 247 (297)
T ss_dssp HHHHHHHHHHHHSCTTTHHHHHHHHTCCHHHHHHHHHHTSCSSEEEEESCCCSHHHHHHHHHTTCSCEEESHHHHTSSCH
T ss_pred HHhhhhhhhhccccccccccccccCCCCHHHHHHHHHhcCCCeEEEecCCCCCHHHHHHHHHcCCCEEEEhHHHHcCCCH
Confidence 99887777888877776544434446689999999887789997668999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChhhHHhhhhccCCceeccccccchh
Q 037779 262 VRRARAIVQAVTNYSDPDVLAEVSCGLGEAMVGIDLNDVKV 302 (310)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (310)
...+++|++.+++|.+|..+.++++.+|++|.||+....+-
T Consensus 248 ~~~~~~l~~ai~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 288 (297)
T 4adt_A 248 QKMASSIVMAVSNFNNPKILLNVSLGLGKAMHGNTKVSNKW 288 (297)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTTTCCCCCCCCCC-----
T ss_pred HHHHHHHHHHHHhhCCHHHHHHHHhhcccCCCCCCcccccc
Confidence 99999999999999999999999999999999999987653
No 4
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=100.00 E-value=3.4e-34 Score=261.06 Aligned_cols=208 Identities=17% Similarity=0.249 Sum_probs=173.6
Q ss_pred ceEEEEeccCCCccccccceeeecCCccccCCCH-HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhh
Q 037779 12 NGAIYETTKKSPFSVKVGLAQMLRGGVIMDVVTP-EQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSS 90 (310)
Q Consensus 12 ~~~i~e~k~~sp~~~~~~~~~~l~~g~i~~~~~~-~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~ 90 (310)
+++|+|+||+|||+ |.|++..+| ++|+.|+++||++||++ ||..+|+|+ ++.++.+++.
T Consensus 59 ~~vIaE~KraSPSk-----------G~i~~~~dp~~~A~~y~~~GA~~IsVl----td~~~f~Gs-----~~~L~~ir~~ 118 (272)
T 3tsm_A 59 FALIAEIKKASPSK-----------GLIRPDFDPPALAKAYEEGGAACLSVL----TDTPSFQGA-----PEFLTAARQA 118 (272)
T ss_dssp CEEEEEECSEETTT-----------EESCSSCCHHHHHHHHHHTTCSEEEEE----CCSTTTCCC-----HHHHHHHHHT
T ss_pred ceEEEEeccCCCCC-----------CccCCCCCHHHHHHHHHHCCCCEEEEe----ccccccCCC-----HHHHHHHHHh
Confidence 79999999999999 999998886 79999999999999998 899999888 9999999999
Q ss_pred cCcceEeeccccchHHHHHHHHcCCCeee-ecCCCChhHHHHHHHh-cCCCCcEEeecCCHHHHHHHHHhCCCEEEEecC
Q 037779 91 VTIPVMAKARIGHFVEAQILEAIGVDYVD-ESEVLTPADEENHINK-HNFRVPFVCGCRNLGESLRRIREGAAMIRTKGE 168 (310)
Q Consensus 91 ~~lPv~~kd~i~~~~~~~~~~~aGad~v~-~~~~~~~~~~~~~~~~-~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~ 168 (310)
+++||++|||+.+..++..+.++|||.|+ +...++..++.+.+.. +..|+.+++++||.+|++++.++|+++|++|++
T Consensus 119 v~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~a~L~~~~l~~l~~~a~~lGl~~lvevh~~eEl~~A~~~ga~iIGinnr 198 (272)
T 3tsm_A 119 CSLPALRKDFLFDPYQVYEARSWGADCILIIMASVDDDLAKELEDTAFALGMDALIEVHDEAEMERALKLSSRLLGVNNR 198 (272)
T ss_dssp SSSCEEEESCCCSTHHHHHHHHTTCSEEEEETTTSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHTTSCCSEEEEECB
T ss_pred cCCCEEECCccCCHHHHHHHHHcCCCEEEEcccccCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCCEEEECCC
Confidence 99999999999765566667789999998 6667776666666655 557899999999999999999999999999854
Q ss_pred CCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCE
Q 037779 169 AGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDG 248 (310)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~Gadg 248 (310)
++.++.. ++....++.+.++. ++|+ |++|||+|++|+.++.++|++|
T Consensus 199 ---------------------~l~t~~~--------dl~~~~~L~~~ip~--~~~v--IaesGI~t~edv~~l~~~Ga~g 245 (272)
T 3tsm_A 199 ---------------------NLRSFEV--------NLAVSERLAKMAPS--DRLL--VGESGIFTHEDCLRLEKSGIGT 245 (272)
T ss_dssp ---------------------CTTTCCB--------CTHHHHHHHHHSCT--TSEE--EEESSCCSHHHHHHHHTTTCCE
T ss_pred ---------------------CCccCCC--------ChHHHHHHHHhCCC--CCcE--EEECCCCCHHHHHHHHHcCCCE
Confidence 2333322 11223344444432 4677 7899999999999999999999
Q ss_pred EEEccccccCCCHHHHHHHHHHHH
Q 037779 249 VFVGSGVFKSGDPVRRARAIVQAV 272 (310)
Q Consensus 249 V~VGsai~~~~dp~~~~~~~~~~~ 272 (310)
|+||++||+++||.+.+++|...-
T Consensus 246 vLVG~almr~~d~~~~~~~l~~g~ 269 (272)
T 3tsm_A 246 FLIGESLMRQHDVAAATRALLTGA 269 (272)
T ss_dssp EEECHHHHTSSCHHHHHHHHHHC-
T ss_pred EEEcHHHcCCcCHHHHHHHHHhcc
Confidence 999999999999999999987643
No 5
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=100.00 E-value=3.7e-34 Score=261.60 Aligned_cols=215 Identities=24% Similarity=0.316 Sum_probs=166.0
Q ss_pred ecceEEEEeccCCCccccccceeeecCCccccCCCH-HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHH
Q 037779 10 YGNGAIYETTKKSPFSVKVGLAQMLRGGVIMDVVTP-EQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIK 88 (310)
Q Consensus 10 ~~~~~i~e~k~~sp~~~~~~~~~~l~~g~i~~~~~~-~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~ 88 (310)
.|.++|+|+||+|||+ |.|....+| ++|+.|+++||++|+++ ||..+|+|+ ++.+++++
T Consensus 50 ~~~~~IaE~K~asPs~-----------g~i~~~~~p~~~A~~y~~~GA~~isvl----td~~~f~Gs-----~~~l~~ir 109 (272)
T 3qja_A 50 PGIGVIAEVKRASPSA-----------GALATIADPAKLAQAYQDGGARIVSVV----TEQRRFQGS-----LDDLDAVR 109 (272)
T ss_dssp SSCEEEEEEC------------------------CHHHHHHHHHHTTCSEEEEE----CCGGGHHHH-----HHHHHHHH
T ss_pred CCCeEEEEEecCCCCC-----------CccCCCCCHHHHHHHHHHcCCCEEEEe----cChhhcCCC-----HHHHHHHH
Confidence 3589999999999999 999998886 79999999999999988 999999988 89999999
Q ss_pred hhcCcceEeeccccchHHHHHHHHcCCCeee-ecCCCChhHHHHHHHh-cCCCCcEEeecCCHHHHHHHHHhCCCEEEEe
Q 037779 89 SSVTIPVMAKARIGHFVEAQILEAIGVDYVD-ESEVLTPADEENHINK-HNFRVPFVCGCRNLGESLRRIREGAAMIRTK 166 (310)
Q Consensus 89 ~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~-~~~~~~~~~~~~~~~~-~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~ 166 (310)
+.+++||+++|++.+..+++.+.++|||+|+ +...+++.++.+.+.. +..|+.+++++||.+|++++.+.|+|+|+++
T Consensus 110 ~~v~lPvl~kdfiid~~qv~~A~~~GAD~VlLi~a~l~~~~l~~l~~~a~~lGl~~lvev~t~ee~~~A~~~Gad~IGv~ 189 (272)
T 3qja_A 110 ASVSIPVLRKDFVVQPYQIHEARAHGADMLLLIVAALEQSVLVSMLDRTESLGMTALVEVHTEQEADRALKAGAKVIGVN 189 (272)
T ss_dssp HHCSSCEEEESCCCSHHHHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEEE
T ss_pred HhCCCCEEECccccCHHHHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHCCCCEEEEC
Confidence 9999999999998764457777889999998 5666666666555544 4478999999999999999999999999998
Q ss_pred cCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcC--CCCEEEEccCCCCCHHHHHHHHHc
Q 037779 167 GEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLG--RLPVVHFAAGGVATPADAAMMMQL 244 (310)
Q Consensus 167 g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~--~iPVv~ia~GGI~t~~di~~~~~~ 244 (310)
+.. +.++. .+.+....+.+.. ++|+ +++|||+|++|+.++.++
T Consensus 190 ~r~---------------------l~~~~------------~dl~~~~~l~~~v~~~~pv--VaegGI~t~edv~~l~~~ 234 (272)
T 3qja_A 190 ARD---------------------LMTLD------------VDRDCFARIAPGLPSSVIR--IAESGVRGTADLLAYAGA 234 (272)
T ss_dssp SBC---------------------TTTCC------------BCTTHHHHHGGGSCTTSEE--EEESCCCSHHHHHHHHHT
T ss_pred CCc---------------------ccccc------------cCHHHHHHHHHhCcccCEE--EEECCCCCHHHHHHHHHc
Confidence 531 11211 1223344444433 5788 678999999999999999
Q ss_pred CCCEEEEccccccCCCHHHHHHHHHHHHHcCCChh
Q 037779 245 GCDGVFVGSGVFKSGDPVRRARAIVQAVTNYSDPD 279 (310)
Q Consensus 245 GadgV~VGsai~~~~dp~~~~~~~~~~~~~~~~~~ 279 (310)
|++||+|||+||+++||.+.+++|.+...+..+|.
T Consensus 235 GadgvlVGsal~~a~dp~~~~~~l~~~~~~~~~~~ 269 (272)
T 3qja_A 235 GADAVLVGEGLVTSGDPRAAVADLVTAGTHPSCPK 269 (272)
T ss_dssp TCSEEEECHHHHTCSCHHHHHHHHHTTTTCSCCCC
T ss_pred CCCEEEEcHHHhCCCCHHHHHHHHHhhhcCCcCCc
Confidence 99999999999999999999999998887766653
No 6
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=100.00 E-value=9.8e-34 Score=252.86 Aligned_cols=200 Identities=20% Similarity=0.250 Sum_probs=162.2
Q ss_pred cceEEEEeccCCCccccccceeeecCCccccCCCH-HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHh
Q 037779 11 GNGAIYETTKKSPFSVKVGLAQMLRGGVIMDVVTP-EQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKS 89 (310)
Q Consensus 11 ~~~~i~e~k~~sp~~~~~~~~~~l~~g~i~~~~~~-~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~ 89 (310)
.+++|+|+||+|||+ |.+. .+| +.|+ +.++||.+||+| ||.++|+|+ +++++++++
T Consensus 45 ~~~iIAEiKraSPSk-----------g~i~--~dp~~iA~-~~~~GA~aiSVL----Td~~~F~Gs-----~~~L~~vr~ 101 (258)
T 4a29_A 45 ITAIIAVYERKSPSG-----------LDVE--RDPIEYAK-FMERYAVGLSIT----TEEKYFNGS-----YETLRKIAS 101 (258)
T ss_dssp CCCEEEEECSBCTTS-----------CBCC--CCHHHHHH-HHTTTCSEEEEE----CCSTTTCCC-----HHHHHHHHT
T ss_pred CcEEEEEEecCCCCC-----------CCcc--CCHHHHHH-HHhCCCeEEEEe----CCCCCCCCC-----HHHHHHHHH
Confidence 468999999999999 8884 355 5665 556899999999 999999999 999999999
Q ss_pred hcCcceEeeccccchHHHHHHHH--cCCCeee-ecCCCChhHHHHHHHh-cCCCCcEEeecCCHHHHHHHHHhCCCEEEE
Q 037779 90 SVTIPVMAKARIGHFVEAQILEA--IGVDYVD-ESEVLTPADEENHINK-HNFRVPFVCGCRNLGESLRRIREGAAMIRT 165 (310)
Q Consensus 90 ~~~lPv~~kd~i~~~~~~~~~~~--aGad~v~-~~~~~~~~~~~~~~~~-~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v 165 (310)
.+++||++|||+.+ ++|++++ +|||.|+ +...++..++.+++.. +..|+.+++++||.+|++++.+.|+++|++
T Consensus 102 ~v~lPvLrKDFiid--~yQI~eAr~~GADaILLI~a~L~~~~l~~l~~~A~~lGl~~LvEVh~~~El~rAl~~~a~iIGI 179 (258)
T 4a29_A 102 SVSIPILMSDFIVK--ESQIDDAYNLGADTVLLIVKILTERELESLLEYARSYGMEPLILINDENDLDIALRIGARFIGI 179 (258)
T ss_dssp TCSSCEEEESCCCS--HHHHHHHHHHTCSEEEEEGGGSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHHTTCSEEEE
T ss_pred hcCCCEeecccccc--HHHHHHHHHcCCCeeehHHhhcCHHHHHHHHHHHHHHhHHHHHhcchHHHHHHHhcCCCcEEEE
Confidence 99999999999984 6666655 9999998 7777887777776665 668899999999999999999999999999
Q ss_pred ecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcC
Q 037779 166 KGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG 245 (310)
Q Consensus 166 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~G 245 (310)
|+ |++.+++.| +....++.+.+++ ++ +.|++|||+|++|+.++.++|
T Consensus 180 NN---------------------RnL~tf~vd--------l~~t~~L~~~ip~--~~--~~VsESGI~t~~dv~~l~~~G 226 (258)
T 4a29_A 180 MS---------------------RDFETGEIN--------KENQRKLISMIPS--NV--VKVAKLGISERNEIEELRKLG 226 (258)
T ss_dssp CS---------------------BCTTTCCBC--------HHHHHHHHTTSCT--TS--EEEEEESSCCHHHHHHHHHTT
T ss_pred eC---------------------CCccccccC--------HHHHHHHHhhCCC--CC--EEEEcCCCCCHHHHHHHHHCC
Confidence 84 456665432 1223344444332 23 337899999999999999999
Q ss_pred CCEEEEccccccCCCHHHHHHHHHHH
Q 037779 246 CDGVFVGSGVFKSGDPVRRARAIVQA 271 (310)
Q Consensus 246 adgV~VGsai~~~~dp~~~~~~~~~~ 271 (310)
++||+||++||+++||. ++|+++
T Consensus 227 ~~a~LVGealmr~~d~~---~~Li~G 249 (258)
T 4a29_A 227 VNAFLISSSLMRNPEKI---KELIEG 249 (258)
T ss_dssp CCEEEECHHHHHCTTHH---HHHHC-
T ss_pred CCEEEECHHHhCCCcHH---HHHHcC
Confidence 99999999999999974 455443
No 7
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=100.00 E-value=1.2e-32 Score=256.03 Aligned_cols=287 Identities=64% Similarity=1.026 Sum_probs=212.2
Q ss_pred CCccccccceeeecCCccccCCCHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccc
Q 037779 22 SPFSVKVGLAQMLRGGVIMDVVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARI 101 (310)
Q Consensus 22 sp~~~~~~~~~~l~~g~i~~~~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i 101 (310)
.++..+.++.+++++|.+++....++++.+.++|+++|++++|+|++.+.++|+.++.+++.++++++.+++|+++++++
T Consensus 8 ~~~~~~~~~~~~~~~g~i~~~~~~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~~~iPv~~k~r~ 87 (305)
T 2nv1_A 8 GTERVKRGMAEMQKGGVIMDVINAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAVSIPVMAKARI 87 (305)
T ss_dssp -CHHHHHHHHHTTTTCEEEEESSHHHHHHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHHCSSCEEEEECT
T ss_pred CcHHHHHHHHHHccCCeeecCCHHHHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHhCCCCEEecccc
Confidence 45666778888999999998777899999999999999888888888888888778888999999999999999999998
Q ss_pred cchHHHHHHHHcCCCeeeecCCCChhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHH
Q 037779 102 GHFVEAQILEAIGVDYVDESEVLTPADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHV 181 (310)
Q Consensus 102 ~~~~~~~~~~~aGad~v~~~~~~~~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~ 181 (310)
++.+.++.+.++|||+|+.+..+++.++.+.+..+.+++++++++++.+|+.++.+.|+|+|.+.|+.+++.+.+++.+.
T Consensus 88 g~~~~~~~~~a~GAd~V~~~~~l~~~~~~~~i~~~~~g~~v~~~~~~~~e~~~a~~~Gad~V~~~G~~g~g~~~~~~~h~ 167 (305)
T 2nv1_A 88 GHIVEARVLEAMGVDYIDESEVLTPADEEFHLNKNEYTVPFVCGCRDLGEATRRIAEGASMLRTKGEPGTGNIVEAVRHM 167 (305)
T ss_dssp TCHHHHHHHHHHTCSEEEECTTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHTTCSEEEECCCTTSCCTHHHHHHH
T ss_pred cchHHHHHHHHCCCCEEEEeccCCHHHHHHHHHHhccCCcEEEEeCCHHHHHHHHHCCCCEEEeccccCccchHHHHhhh
Confidence 77778899999999999865555555544444333467899999999999999999999999998877667777887777
Q ss_pred HHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCH
Q 037779 182 RSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDP 261 (310)
Q Consensus 182 ~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp 261 (310)
+.+..++..+..++.+.+..+......++++++.+++..++||+.+++|||.|++++.+++++||++|+|||+|++++||
T Consensus 168 rt~~~~i~~l~gi~~~~~~~~~~~~~~~~~~i~~i~~~~~iPvi~~a~GGI~~~~d~~~~~~~GadgV~vGsai~~~~~p 247 (305)
T 2nv1_A 168 RKVNAQVRKVVAMSEDELMTEAKNLGAPYELLLQIKKDGKLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSDNP 247 (305)
T ss_dssp HHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHTSCSSCEEBCSCCCSHHHHHHHHHTTCSCEEECGGGGGSSCH
T ss_pred hhhhccchhhccccchhhhcccccccccHHHHHHHHHhcCCCEEEEeccCCCCHHHHHHHHHcCCCEEEEcHHHHcCCCH
Confidence 65433333333333332211111124467888888887789995448999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChhhHHhhhhccCCceeccccccchhh-hhhcc
Q 037779 262 VRRARAIVQAVTNYSDPDVLAEVSCGLGEAMVGIDLNDVKVE-RYANR 308 (310)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 308 (310)
...+++|.+.+.++.++..+.++++..|.+|.+|...+.+-| |+++|
T Consensus 248 ~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 295 (305)
T 2nv1_A 248 AKFAKAIVEATTHFTDYKLIAELSKELGTAMKGIEISNLLPEQRMQER 295 (305)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHTSCC---------------------
T ss_pred HHHHHHHHHHHHHhcChhhHHHHHHHhhhhhcCCChhhcchHHHHHhh
Confidence 999999999999999999999999999999999999999764 88877
No 8
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=100.00 E-value=1.6e-31 Score=240.72 Aligned_cols=205 Identities=17% Similarity=0.222 Sum_probs=168.6
Q ss_pred ceEEEEeccCCCccccccceeeecCCccccCCCH-HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhh
Q 037779 12 NGAIYETTKKSPFSVKVGLAQMLRGGVIMDVVTP-EQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSS 90 (310)
Q Consensus 12 ~~~i~e~k~~sp~~~~~~~~~~l~~g~i~~~~~~-~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~ 90 (310)
+++|+|+||+|||+ |.|++..++ ++|+.|+++ |.+|++| ||.++|+|+ +++++++++.
T Consensus 41 ~~vIaE~K~aSPSk-----------G~i~~~~~~~~iA~~y~~~-A~~IsVl----Td~~~F~gs-----~~dL~~ir~~ 99 (251)
T 1i4n_A 41 VKIIAEFKKASPSA-----------GDINADASLEDFIRMYDEL-ADAISIL----TEKHYFKGD-----PAFVRAARNL 99 (251)
T ss_dssp CEEEEEECSBCSSS-----------CBSCTTCCHHHHHHHHHHH-CSEEEEE----CCCSSSCCC-----THHHHHHHTT
T ss_pred ceEEEeecCCCCCC-----------CccCCCCCHHHHHHHHHHh-CCceEEE----ecccccCCC-----HHHHHHHHHh
Confidence 78999999999999 999988886 799999999 9999999 999999998 9999999999
Q ss_pred cCcceEeeccccchHHHHHHHHcCCCeee-ecCCCChhHHHHHHHh-cCCCCcEEeecCCHHHHHHHHHh-CCCEEEEec
Q 037779 91 VTIPVMAKARIGHFVEAQILEAIGVDYVD-ESEVLTPADEENHINK-HNFRVPFVCGCRNLGESLRRIRE-GAAMIRTKG 167 (310)
Q Consensus 91 ~~lPv~~kd~i~~~~~~~~~~~aGad~v~-~~~~~~~~~~~~~~~~-~~~~l~v~~~v~t~~ea~~a~~~-Gad~I~v~g 167 (310)
+++||++|||+.+..++..+.++|||.|+ +...++..++.+.+.. +..|+.+++++||.+|++++.++ |+++|++|.
T Consensus 100 v~lPvLrKDfi~~~~qi~ea~~~GAD~ilLi~a~l~~~~l~~l~~~a~~lGl~~lvEv~~~eE~~~A~~l~g~~iIGinn 179 (251)
T 1i4n_A 100 TCRPILAKDFYIDTVQVKLASSVGADAILIIARILTAEQIKEIYEAAEELGMDSLVEVHSREDLEKVFSVIRPKIIGINT 179 (251)
T ss_dssp CCSCEEEECCCCSTHHHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHTTTCEEEEEECSHHHHHHHHTTCCCSEEEEEC
T ss_pred CCCCEEEeeCCCCHHHHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCCCEEEEeC
Confidence 99999999999743344446679999998 6666666667666665 66899999999999999999999 999999995
Q ss_pred CCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCC
Q 037779 168 EAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCD 247 (310)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~Gad 247 (310)
+. +.++.. ++....++.+.++. ++++ |++|||+|++|+.++.++ ++
T Consensus 180 r~---------------------l~t~~~--------d~~~~~~l~~~ip~--~~~v--IaEsGI~t~edv~~~~~~-a~ 225 (251)
T 1i4n_A 180 RD---------------------LDTFEI--------KKNVLWELLPLVPD--DTVV--VAESGIKDPRELKDLRGK-VN 225 (251)
T ss_dssp BC---------------------TTTCCB--------CTTHHHHHGGGSCT--TSEE--EEESCCCCGGGHHHHTTT-CS
T ss_pred cc---------------------cccCCC--------CHHHHHHHHHhCCC--CCEE--EEeCCCCCHHHHHHHHHh-CC
Confidence 42 233221 11212233333221 3455 789999999999999999 99
Q ss_pred EEEEccccccCCCHHHHHHHHHHH
Q 037779 248 GVFVGSGVFKSGDPVRRARAIVQA 271 (310)
Q Consensus 248 gV~VGsai~~~~dp~~~~~~~~~~ 271 (310)
+|+||++||+++||.+.+++|..+
T Consensus 226 avLVG~aimr~~d~~~~~~~l~~~ 249 (251)
T 1i4n_A 226 AVLVGTSIMKAENPRRFLEEMRAW 249 (251)
T ss_dssp EEEECHHHHHCSSHHHHHHHHHHH
T ss_pred EEEEcHHHcCCcCHHHHHHHHHhC
Confidence 999999999999999999998765
No 9
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=99.98 E-value=5.3e-32 Score=245.28 Aligned_cols=205 Identities=19% Similarity=0.234 Sum_probs=166.8
Q ss_pred cceEEEEeccCCCccccccceeeecCCccccCCCH-HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHh
Q 037779 11 GNGAIYETTKKSPFSVKVGLAQMLRGGVIMDVVTP-EQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKS 89 (310)
Q Consensus 11 ~~~~i~e~k~~sp~~~~~~~~~~l~~g~i~~~~~~-~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~ 89 (310)
+.++|+|+||+|||+ |+|++ .+| ++|+.|+++||++||++ |+..+|.|+ ++.++.+++
T Consensus 45 ~~~~IaE~k~aSPsk-----------g~i~~-~~p~~~A~~~~~~GA~~isvl----t~~~~f~G~-----~~~l~~i~~ 103 (254)
T 1vc4_A 45 GLSVIAEVKRQSPSE-----------GLIRE-VDPVEAALAYARGGARAVSVL----TEPHRFGGS-----LLDLKRVRE 103 (254)
T ss_dssp SCEEEEEECSCCTTT-----------CCCCS-CCHHHHHHHHHHTTCSEEEEE----CCCSSSCCC-----HHHHHHHHH
T ss_pred CCcEEeeecCCCcCC-----------CcCCC-CCHHHHHHHHHHcCCCEEEEe----cchhhhccC-----HHHHHHHHH
Confidence 588999999999999 99999 775 89999999999999988 888899888 999999999
Q ss_pred hcCcceEeeccccchHHHHHHHHcCCCeee-ecCCCChhHHHHHHHh-cCCCCcEEeecCCHHHHHHHHHhCCCEEEEec
Q 037779 90 SVTIPVMAKARIGHFVEAQILEAIGVDYVD-ESEVLTPADEENHINK-HNFRVPFVCGCRNLGESLRRIREGAAMIRTKG 167 (310)
Q Consensus 90 ~~~lPv~~kd~i~~~~~~~~~~~aGad~v~-~~~~~~~~~~~~~~~~-~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g 167 (310)
.+++||+++||+.+..++..+.++|||.|+ +...++ .++.+.+.. +.+|+.+++++|+.+|+.++.+.|+++++++.
T Consensus 104 ~v~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~~~l~-~~l~~l~~~a~~lGl~~lvev~~~~E~~~a~~~gad~IGvn~ 182 (254)
T 1vc4_A 104 AVDLPLLRKDFVVDPFMLEEARAFGASAALLIVALLG-ELTGAYLEEARRLGLEALVEVHTERELEIALEAGAEVLGINN 182 (254)
T ss_dssp HCCSCEEEESCCCSHHHHHHHHHTTCSEEEEEHHHHG-GGHHHHHHHHHHHTCEEEEEECSHHHHHHHHHHTCSEEEEES
T ss_pred hcCCCEEECCcCCCHHHHHHHHHcCCCEEEECccchH-HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCCEEEEcc
Confidence 999999999999865566667889999998 554444 555555543 34679999999999999999999999999985
Q ss_pred CCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcC-CCCEEEEccCCCCCHHHHHHHHHcCC
Q 037779 168 EAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQLGC 246 (310)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~-~iPVv~ia~GGI~t~~di~~~~~~Ga 246 (310)
..+ .++.. ++....++.+.++... ++|+ |++|||+|++|+.++.+ |+
T Consensus 183 ~~l---------------------~~~~~--------dl~~~~~L~~~i~~~~~~~~v--IAegGI~s~~dv~~l~~-Ga 230 (254)
T 1vc4_A 183 RDL---------------------ATLHI--------NLETAPRLGRLARKRGFGGVL--VAESGYSRKEELKALEG-LF 230 (254)
T ss_dssp BCT---------------------TTCCB--------CTTHHHHHHHHHHHTTCCSEE--EEESCCCSHHHHHTTTT-TC
T ss_pred ccC---------------------cCCCC--------CHHHHHHHHHhCccccCCCeE--EEEcCCCCHHHHHHHHc-CC
Confidence 432 22211 2222334455554311 4677 67999999999999999 99
Q ss_pred CEEEEccccccCCCHHHHHHHHH
Q 037779 247 DGVFVGSGVFKSGDPVRRARAIV 269 (310)
Q Consensus 247 dgV~VGsai~~~~dp~~~~~~~~ 269 (310)
+||+|||+||+++||.+.+++|+
T Consensus 231 ~gvlVGsAl~~~~d~~~~~~~l~ 253 (254)
T 1vc4_A 231 DAVLIGTSLMRAPDLEAALRELV 253 (254)
T ss_dssp SEEEECHHHHTSSCHHHHHHHHH
T ss_pred CEEEEeHHHcCCCCHHHHHHHHh
Confidence 99999999999999999998875
No 10
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=99.98 E-value=9.2e-32 Score=260.35 Aligned_cols=239 Identities=19% Similarity=0.218 Sum_probs=189.3
Q ss_pred cceEEEEeccCCCccccccceeeecCCccccCCCH-HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHh
Q 037779 11 GNGAIYETTKKSPFSVKVGLAQMLRGGVIMDVVTP-EQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKS 89 (310)
Q Consensus 11 ~~~~i~e~k~~sp~~~~~~~~~~l~~g~i~~~~~~-~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~ 89 (310)
+.++|+|+||+|||+ |.|++..++ ++|+.|+++ |.+||+| ||.++|+|+ +++++++|+
T Consensus 47 ~~~vIaEvKraSPSk-----------G~i~~~~~~~~iA~~y~~~-A~~IsvL----Td~~~F~gs-----~~dL~~vr~ 105 (452)
T 1pii_A 47 RTAFILECKKASPSK-----------GVIRDDFDPARIAAIYKHY-ASAISVL----TDEKYFQGS-----FNFLPIVSQ 105 (452)
T ss_dssp SCEEEEEECSEETTT-----------EESCSSCCHHHHHHHHTTT-CSEEEEE----CCSTTTCCC-----TTHHHHHHH
T ss_pred CCceEEEecCCCCCC-----------CccCCCCCHHHHHHHHHhh-CcEEEEE----ecccccCCC-----HHHHHHHHH
Confidence 589999999999999 999988886 789999998 9999999 999999998 899999999
Q ss_pred hcCcceEeeccccchHHHHHHHHcCCCeee-ecCCCChhHHHHHHHh-cCCCCcEEeecCCHHHHHHHHHhCCCEEEEec
Q 037779 90 SVTIPVMAKARIGHFVEAQILEAIGVDYVD-ESEVLTPADEENHINK-HNFRVPFVCGCRNLGESLRRIREGAAMIRTKG 167 (310)
Q Consensus 90 ~~~lPv~~kd~i~~~~~~~~~~~aGad~v~-~~~~~~~~~~~~~~~~-~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g 167 (310)
.+++||++|||+.+..++..+.++|||.|+ +...++..++.+.+.. +..|+.+++++||.+|++++.++|+++|++|.
T Consensus 106 ~v~lPvLrKDFI~d~~Qi~ea~~~GAD~ILLi~a~l~~~~l~~l~~~a~~lgm~~LvEvh~~eE~~~A~~lga~iIGinn 185 (452)
T 1pii_A 106 IAPQPILCKDFIIDPYQIYLARYYQADACLLMLSVLDDDQYRQLAAVAHSLEMGVLTEVSNEEEQERAIALGAKVVGINN 185 (452)
T ss_dssp HCCSCEEEESCCCSHHHHHHHHHTTCSEEEEETTTCCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHTTCSEEEEES
T ss_pred hcCCCeEEEeccCCHHHHHHHHHcCCCEEEEEcccCCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHCCCCEEEEeC
Confidence 999999999999743333335569999998 6667776666666655 55799999999999999999999999999985
Q ss_pred CCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCC
Q 037779 168 EAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCD 247 (310)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~Gad 247 (310)
+ ++.+++. ++....++.+.++. ++++ |++|||+|++|+.++.++ ++
T Consensus 186 r---------------------~L~t~~~--------dl~~~~~L~~~ip~--~~~v--IaEsGI~t~edv~~~~~~-a~ 231 (452)
T 1pii_A 186 R---------------------DLRDLSI--------DLNRTRELAPKLGH--NVTV--ISESGINTYAQVRELSHF-AN 231 (452)
T ss_dssp E---------------------ETTTTEE--------CTHHHHHHHHHHCT--TSEE--EEESCCCCHHHHHHHTTT-CS
T ss_pred C---------------------CCCCCCC--------CHHHHHHHHHhCCC--CCeE--EEECCCCCHHHHHHHHHh-CC
Confidence 4 3333322 22223455555543 3555 789999999999999999 99
Q ss_pred EEEEccccccCCCHHHHHHHHHHHHHc--CCChhhHHhhhhccCCceeccccccchhhhh
Q 037779 248 GVFVGSGVFKSGDPVRRARAIVQAVTN--YSDPDVLAEVSCGLGEAMVGIDLNDVKVERY 305 (310)
Q Consensus 248 gV~VGsai~~~~dp~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (310)
+|+||++||+++||.+.+++|.....+ +-.-.--.+.+...|.++.|+.|- -+-.||
T Consensus 232 avLVGealmr~~d~~~~~~~l~~~~~KICGit~~eda~~a~~~Gad~iGfIf~-~~SpR~ 290 (452)
T 1pii_A 232 GFLIGSALMAHDDLHAAVRRVLLGENKVCGLTRGQDAKAAYDAGAIYGGLIFV-ATSPRC 290 (452)
T ss_dssp EEEECHHHHTCSCHHHHHHHHHHCSCEECCCCSHHHHHHHHHHTCSEEEEECC-TTCTTB
T ss_pred EEEEcHHHcCCcCHHHHHHHHHHHhccccCCCcHHHHHHHHhcCCCEEEeecC-CCCCCC
Confidence 999999999999999999998753111 001122256667789999999983 234455
No 11
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=99.96 E-value=2.4e-28 Score=225.97 Aligned_cols=278 Identities=72% Similarity=1.126 Sum_probs=208.0
Q ss_pred ccceeeecCCccccCCCHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHH
Q 037779 28 VGLAQMLRGGVIMDVVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEA 107 (310)
Q Consensus 28 ~~~~~~l~~g~i~~~~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~ 107 (310)
.++.++|+++.|..+...++++.+.++|+++|+..+.+|++.++++|..+..+++.++++++.+++|++++..+++.+++
T Consensus 14 ~~~~~~~~~~~i~~~~~~~~a~~~~~~Ga~~i~~~e~v~~~~~~~~G~~~~~~~~~i~~i~~~~~~Pvi~~~~~~~~~~~ 93 (297)
T 2zbt_A 14 TGFAEMFKGGVIMDVTTPEQAVIAEEAGAVAVMALERVPADIRAQGGVARMSDPKIIKEIMAAVSIPVMAKVRIGHFVEA 93 (297)
T ss_dssp CSSSGGGTTEEEEEESSHHHHHHHHHHTCSEEEECSSCHHHHHHTTCCCCCCCHHHHHHHHTTCSSCEEEEEETTCHHHH
T ss_pred HHHHHHhhCCeeeeechHHHHHHHHHCCCcEEEeccccchHHHhhcCCccCCCHHHHHHHHHhcCCCeEEEeccCCHHHH
Confidence 34457889999888888999999999999999543467788788888777888999999999999999988777766889
Q ss_pred HHHHHcCCCeeeecCCCChhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcc
Q 037779 108 QILEAIGVDYVDESEVLTPADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGD 187 (310)
Q Consensus 108 ~~~~~aGad~v~~~~~~~~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~ 187 (310)
+.+.++|||.|+.+...++.++.+.+.++.+++.++++++|++++..+.+.|+|+|+++|+...+.+.++..+.+.+...
T Consensus 94 ~~~~~aGad~v~~~~~~~~~~~~~~~~~~~~~i~l~~~v~~~~~~~~a~~~Gad~I~v~G~~~~g~~~e~~~~~~~~~~~ 173 (297)
T 2zbt_A 94 MILEAIGVDFIDESEVLTPADEEHHIDKWKFKVPFVCGARNLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHARTMWKE 173 (297)
T ss_dssp HHHHHTTCSEEEEETTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHTTCSEEEECCCSSSCCTHHHHHHHHHHHHH
T ss_pred HHHHHCCCCEEeeeCCCChHHHHHHHHHhCCCceEEeecCCHHHHHHHHHcCCCEEEEcccccCcchHHHHhhHHHHHHH
Confidence 99999999999744433444444445444457888889999999999999999999999876555666676665554443
Q ss_pred eecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHH
Q 037779 188 IRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARA 267 (310)
Q Consensus 188 ~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~ 267 (310)
++.+...++....+........++.++.+++..++|+++++.|||+|++++.+++++|||+|++||+|++++||...+++
T Consensus 174 i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~~~~~~pvi~~a~GGI~~~e~i~~~~~aGadgvvvGsai~~~~dp~~~~~~ 253 (297)
T 2zbt_A 174 IRYVQSLREDELMAYAKEIGAPFELVKWVHDHGRLPVVNFAAGGIATPADAALMMHLGMDGVFVGSGIFKSGDPRKRARA 253 (297)
T ss_dssp HHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHSSCSSCEEBCSSCCSHHHHHHHHHTTCSEEEECGGGGGSSCHHHHHHH
T ss_pred HHHcCCcCCCCchhhhhcchhhHHHHHHHHHhcCCCcEEEeeCCCCCHHHHHHHHHcCCCEEEEchHHhCCCCHHHHHHH
Confidence 33222122111000000123467788888877778984338999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCChhhHHhhhhccCCceeccccccchhhhh
Q 037779 268 IVQAVTNYSDPDVLAEVSCGLGEAMVGIDLNDVKVERY 305 (310)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (310)
|++.++.+.+|..+.++++.+|.++.++++...|-|.+
T Consensus 254 l~~~i~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 291 (297)
T 2zbt_A 254 IVRAVAHYNDPEVLAEVSEDLGEPMVGINLDQLKEEER 291 (297)
T ss_dssp HHHHHHTTTCHHHHHHHHTTCCCCC-------------
T ss_pred HHHHHHHHhchHhhhHHHHhcCceeEEeechhcccccc
Confidence 99999999999999999999999999999998776543
No 12
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=99.87 E-value=2.3e-21 Score=172.79 Aligned_cols=174 Identities=22% Similarity=0.286 Sum_probs=135.4
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEe---ec------ccc-chHHHHHHHHcCC
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMA---KA------RIG-HFVEAQILEAIGV 115 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~---kd------~i~-~~~~~~~~~~aGa 115 (310)
++|++|.++|+.+|+. ++ ++.++++|+.+++|++. ++ ++. +.++++.+.++||
T Consensus 40 ~~A~a~~~~Ga~~i~~------------~~-----~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGa 102 (229)
T 3q58_A 40 AMAQAAASAGAVAVRI------------EG-----IENLRTVRPHLSVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGA 102 (229)
T ss_dssp HHHHHHHHTTCSEEEE------------ES-----HHHHHHHGGGCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTC
T ss_pred HHHHHHHHCCCcEEEE------------CC-----HHHHHHHHHhcCCCEEEEEeecCCCCceEeCccHHHHHHHHHcCC
Confidence 7899999999999842 12 78999999999999983 33 222 2357788899999
Q ss_pred Ceee-ec-CCCCh---hHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceec
Q 037779 116 DYVD-ES-EVLTP---ADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRV 190 (310)
Q Consensus 116 d~v~-~~-~~~~~---~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~ 190 (310)
|.|+ +. ....| .++.+.+++ .++.++++++|.++++++.+.|+|+|+++...+++.
T Consensus 103 d~I~l~~~~~~~p~~l~~~i~~~~~--~g~~v~~~v~t~eea~~a~~~Gad~Ig~~~~g~t~~----------------- 163 (229)
T 3q58_A 103 DIIAFDASFRSRPVDIDSLLTRIRL--HGLLAMADCSTVNEGISCHQKGIEFIGTTLSGYTGP----------------- 163 (229)
T ss_dssp SEEEEECCSSCCSSCHHHHHHHHHH--TTCEEEEECSSHHHHHHHHHTTCSEEECTTTTSSSS-----------------
T ss_pred CEEEECccccCChHHHHHHHHHHHH--CCCEEEEecCCHHHHHHHHhCCCCEEEecCccCCCC-----------------
Confidence 9987 33 22233 455555544 479999999999999999999999998764433321
Q ss_pred ccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHH
Q 037779 191 LRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQ 270 (310)
Q Consensus 191 l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~ 270 (310)
.. ...+++++++.+++. ++|| |++|||+|++|+.+++++||+||+|||+|++ |...+++|.+
T Consensus 164 -~~-----------~~~~~~~li~~l~~~-~ipv--IA~GGI~t~~d~~~~~~~GadgV~VGsai~~---p~~~~~~f~~ 225 (229)
T 3q58_A 164 -IT-----------PVEPDLAMVTQLSHA-GCRV--IAEGRYNTPALAANAIEHGAWAVTVGSAITR---IEHICQWFSH 225 (229)
T ss_dssp -CC-----------CSSCCHHHHHHHHTT-TCCE--EEESSCCSHHHHHHHHHTTCSEEEECHHHHC---HHHHHHHHHH
T ss_pred -Cc-----------CCCCCHHHHHHHHHc-CCCE--EEECCCCCHHHHHHHHHcCCCEEEEchHhcC---hHHHHHHHHH
Confidence 00 123468888888876 8999 6799999999999999999999999999997 7888888888
Q ss_pred HHH
Q 037779 271 AVT 273 (310)
Q Consensus 271 ~~~ 273 (310)
+++
T Consensus 226 ~~~ 228 (229)
T 3q58_A 226 AVK 228 (229)
T ss_dssp HHC
T ss_pred HHh
Confidence 764
No 13
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=99.86 E-value=1.3e-20 Score=168.28 Aligned_cols=175 Identities=23% Similarity=0.256 Sum_probs=135.9
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEe---ec------ccc-chHHHHHHHHcCC
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMA---KA------RIG-HFVEAQILEAIGV 115 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~---kd------~i~-~~~~~~~~~~aGa 115 (310)
++|++|.++|+.+|+. ++ ++.++++++.+++|++. ++ ++. +.++++.+.++||
T Consensus 40 ~~A~a~~~~Ga~~i~~------------~~-----~~~i~~ir~~v~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Ga 102 (232)
T 3igs_A 40 AMALAAEQAGAVAVRI------------EG-----IDNLRMTRSLVSVPIIGIIKRDLDESPVRITPFLDDVDALAQAGA 102 (232)
T ss_dssp HHHHHHHHTTCSEEEE------------ES-----HHHHHHHHTTCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTC
T ss_pred HHHHHHHHCCCeEEEE------------CC-----HHHHHHHHHhcCCCEEEEEeecCCCcceEeCccHHHHHHHHHcCC
Confidence 7899999999999842 12 78999999999999974 33 222 3357788899999
Q ss_pred Ceee-ecC-CCCh---hHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceec
Q 037779 116 DYVD-ESE-VLTP---ADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRV 190 (310)
Q Consensus 116 d~v~-~~~-~~~~---~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~ 190 (310)
|.|+ +.. ...| .++.+.+++ .++.++++++|.++++++.+.|+|+|+++...+++.
T Consensus 103 d~V~l~~~~~~~p~~l~~~i~~~~~--~g~~v~~~v~t~eea~~a~~~Gad~Ig~~~~g~t~~----------------- 163 (232)
T 3igs_A 103 AIIAVDGTARQRPVAVEALLARIHH--HHLLTMADCSSVDDGLACQRLGADIIGTTMSGYTTP----------------- 163 (232)
T ss_dssp SEEEEECCSSCCSSCHHHHHHHHHH--TTCEEEEECCSHHHHHHHHHTTCSEEECTTTTSSSS-----------------
T ss_pred CEEEECccccCCHHHHHHHHHHHHH--CCCEEEEeCCCHHHHHHHHhCCCCEEEEcCccCCCC-----------------
Confidence 9987 332 2233 455555544 479999999999999999999999998764333321
Q ss_pred ccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHH
Q 037779 191 LRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQ 270 (310)
Q Consensus 191 l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~ 270 (310)
. +...+++++++.+++. ++|| |++|||+|++|+.+++++||+||+|||+|++ |...+++|.+
T Consensus 164 -~-----------~~~~~~~~~i~~l~~~-~ipv--IA~GGI~t~~d~~~~~~~GadgV~VGsal~~---p~~~~~~~~~ 225 (232)
T 3igs_A 164 -D-----------TPEEPDLPLVKALHDA-GCRV--IAEGRYNSPALAAEAIRYGAWAVTVGSAITR---LEHICGWYND 225 (232)
T ss_dssp -S-----------CCSSCCHHHHHHHHHT-TCCE--EEESCCCSHHHHHHHHHTTCSEEEECHHHHC---HHHHHHHHHH
T ss_pred -C-----------CCCCCCHHHHHHHHhc-CCcE--EEECCCCCHHHHHHHHHcCCCEEEEehHhcC---HHHHHHHHHH
Confidence 0 0123468888888876 8999 6799999999999999999999999999996 8888899988
Q ss_pred HHHc
Q 037779 271 AVTN 274 (310)
Q Consensus 271 ~~~~ 274 (310)
.++.
T Consensus 226 ~i~~ 229 (232)
T 3igs_A 226 ALKK 229 (232)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8763
No 14
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=99.77 E-value=5.1e-18 Score=152.33 Aligned_cols=184 Identities=15% Similarity=0.131 Sum_probs=131.8
Q ss_pred HHHHHHHHHcCCcEEEeccccc---------chhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCC
Q 037779 45 PEQARIAEEAGACAVMALERVP---------ADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGV 115 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~---------~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGa 115 (310)
.+.++.+.++|+++| +|+... .+.+.+ ......++++++..++|++++|.+ +.+.++||
T Consensus 46 ~~~~~~al~~Gv~~v-qlR~K~~~~~~~~~~l~~~~~-----~~~a~~l~~l~~~~~~~liInd~~------~lA~~~gA 113 (243)
T 3o63_A 46 AQFAEAALAGGVDII-QLRDKGSPGELRFGPLQARDE-----LAACEILADAAHRYGALFAVNDRA------DIARAAGA 113 (243)
T ss_dssp HHHHHHHHHTTCSEE-EECCTTCHHHHHHCSCCHHHH-----HHHHHHHHHHHHHTTCEEEEESCH------HHHHHHTC
T ss_pred HHHHHHHHHCCCCEE-EEccCCCCccccccCCCHHHH-----HHHHHHHHHHHHhhCCEEEEeCHH------HHHHHhCC
Confidence 478889999999998 563111 001111 111344556667779999998764 35778999
Q ss_pred Ceee-ecCCCChhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceeccccc
Q 037779 116 DYVD-ESEVLTPADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNM 194 (310)
Q Consensus 116 d~v~-~~~~~~~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~ 194 (310)
|+|+ ....++..++.+. .+.+..+.+++||.+|+.++.+.|+|||+++ +.+.+ .
T Consensus 114 dGVHLg~~dl~~~~~r~~---~~~~~~iG~S~ht~~Ea~~A~~~GaDyI~vg-pvf~T---------------------~ 168 (243)
T 3o63_A 114 DVLHLGQRDLPVNVARQI---LAPDTLIGRSTHDPDQVAAAAAGDADYFCVG-PCWPT---------------------P 168 (243)
T ss_dssp SEEEECTTSSCHHHHHHH---SCTTCEEEEEECSHHHHHHHHHSSCSEEEEC-CSSCC---------------------C
T ss_pred CEEEecCCcCCHHHHHHh---hCCCCEEEEeCCCHHHHHHHhhCCCCEEEEc-CccCC---------------------C
Confidence 9999 4455554444332 3457889999999999999999999999995 32211 1
Q ss_pred CchhHHhhhccCCCcHHHHHHHHhc--CCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHH
Q 037779 195 DDDEVFTFAKNIAAPYDLVMQTKQL--GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAV 272 (310)
Q Consensus 195 ~~d~~~~~~~~~~~~~~l~~~i~~~--~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~ 272 (310)
++.. .....++.++++.+. .++||+ +.||| +++++.+++++||+||+|||+|++++||.+.+++|++.+
T Consensus 169 tK~~------~~~~gl~~l~~~~~~~~~~iPvv--AiGGI-~~~ni~~~~~aGa~gvav~sai~~a~dp~~a~~~l~~~~ 239 (243)
T 3o63_A 169 TKPG------RAAPGLGLVRVAAELGGDDKPWF--AIGGI-NAQRLPAVLDAGARRIVVVRAITSADDPRAAAEQLRSAL 239 (243)
T ss_dssp C-----------CCCHHHHHHHHTC---CCCEE--EESSC-CTTTHHHHHHTTCCCEEESHHHHTCSSHHHHHHHHHHHH
T ss_pred CCCC------cchhhHHHHHHHHHhccCCCCEE--EecCC-CHHHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHH
Confidence 1100 012356777877765 479995 56999 799999999999999999999999999999999999888
Q ss_pred Hc
Q 037779 273 TN 274 (310)
Q Consensus 273 ~~ 274 (310)
++
T Consensus 240 ~~ 241 (243)
T 3o63_A 240 TA 241 (243)
T ss_dssp HT
T ss_pred Hh
Confidence 64
No 15
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=99.77 E-value=1.8e-17 Score=150.14 Aligned_cols=200 Identities=17% Similarity=0.188 Sum_probs=133.7
Q ss_pred ceeeecCCccccCCC-HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHH
Q 037779 30 LAQMLRGGVIMDVVT-PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQ 108 (310)
Q Consensus 30 ~~~~l~~g~i~~~~~-~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~ 108 (310)
..+++.+|......+ .++++.+.++|+++|+.. |.... |.....+.+.++++++.+++|+++++++.+.++++
T Consensus 17 ~~v~~~~g~~~~~~~~~~~a~~~~~~Ga~~i~v~-----d~~~~-~~~~g~~~~~i~~i~~~~~iPvi~~ggi~~~~~i~ 90 (266)
T 2w6r_A 17 FMVFTHSGKKNTGILLRDWVVEVEKRGAGEILLT-----SIDRD-GTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFL 90 (266)
T ss_dssp EEEEETTTTEEEEEEHHHHHHHHHHHTCSEEEEE-----ETTTS-SCSSCCCHHHHHHHGGGCCSCEEEESCCCSTHHHH
T ss_pred EEEEEcCCeeccCCCHHHHHHHHHHCCCCEEEEE-----ecCcc-cCCCcccHHHHHHHHHhcCCCEEEECCCCCHHHHH
Confidence 567788887755445 489999999999999543 33211 11123468999999999999999999988777888
Q ss_pred HHHHcCCCeee-ecCCC----ChhHHHHHHHhcC--C-CCcEEeecC-------------------CHHH-HHHHHHhCC
Q 037779 109 ILEAIGVDYVD-ESEVL----TPADEENHINKHN--F-RVPFVCGCR-------------------NLGE-SLRRIREGA 160 (310)
Q Consensus 109 ~~~~aGad~v~-~~~~~----~~~~~~~~~~~~~--~-~l~v~~~v~-------------------t~~e-a~~a~~~Ga 160 (310)
.+.++|||.++ .+..+ ++..+.+.++..+ . .+.+.++++ +..| ++++.+.|+
T Consensus 91 ~~~~~Gad~v~lg~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~ 170 (266)
T 2w6r_A 91 EAFLAGADKALAASVFHFREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVVEVEKRGA 170 (266)
T ss_dssp HHHHHTCSEEECCCCC------CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHTTC
T ss_pred HHHHcCCcHhhhhHHHHhCCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHHHHHHHcCC
Confidence 88899999998 44444 4555555443333 1 133455552 3344 577778899
Q ss_pred CEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHH
Q 037779 161 AMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAM 240 (310)
Q Consensus 161 d~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~ 240 (310)
+.|.+++...++. ..+.++++++.+++..++|| |++|||++++|+.+
T Consensus 171 ~~i~~t~~~~~g~-------------------------------~~g~~~~~i~~l~~~~~ipv--ia~GGI~~~ed~~~ 217 (266)
T 2w6r_A 171 GEILLTSIDRDGT-------------------------------KSGYDTEMIRFVRPLTTLPI--IASGGAGKMEHFLE 217 (266)
T ss_dssp SEEEEEETTTTTT-------------------------------CSCCCHHHHHHHGGGCCSCE--EEESCCCSHHHHHH
T ss_pred CEEEEEeecCCCC-------------------------------cCCCCHHHHHHHHHHcCCCE--EEeCCCCCHHHHHH
Confidence 9888763211110 12346888899988788999 67899999999999
Q ss_pred HHHcCCCEEEEccccccCCCHHHHHHHH
Q 037779 241 MMQLGCDGVFVGSGVFKSGDPVRRARAI 268 (310)
Q Consensus 241 ~~~~GadgV~VGsai~~~~dp~~~~~~~ 268 (310)
++++||+||+|||+|++.+++...++++
T Consensus 218 ~~~~Gadgv~vgsal~~~~~~~~~~~~~ 245 (266)
T 2w6r_A 218 AFLAGADAALAASVFHFREIDMRELKEY 245 (266)
T ss_dssp HHHHTCSEEEESTTTC------------
T ss_pred HHHcCCHHHHccHHHHcCCCCHHHHHHH
Confidence 9999999999999999998765544443
No 16
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=99.76 E-value=8.7e-18 Score=150.41 Aligned_cols=201 Identities=23% Similarity=0.203 Sum_probs=136.4
Q ss_pred ccceeeecCCccccC---CCH-HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccc
Q 037779 28 VGLAQMLRGGVIMDV---VTP-EQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGH 103 (310)
Q Consensus 28 ~~~~~~l~~g~i~~~---~~~-~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~ 103 (310)
.+.+++|.+|..... .++ +.++.++++|+++++.. ..-..|.+. ..+ +.++++++.+++|++++.++.+
T Consensus 14 ~g~~V~~~~g~~~~~~~~~d~~~~a~~~~~~Gad~i~v~----~~d~~~~~~--~~~-~~i~~i~~~~~ipv~v~ggI~~ 86 (244)
T 1vzw_A 14 DGQAVRLVHGESGTETSYGSPLEAALAWQRSGAEWLHLV----DLDAAFGTG--DNR-ALIAEVAQAMDIKVELSGGIRD 86 (244)
T ss_dssp TTEEBC--------CCBCCCHHHHHHHHHHTTCSEEEEE----EHHHHHTSC--CCH-HHHHHHHHHCSSEEEEESSCCS
T ss_pred CCEEEEeeccccccceecCCHHHHHHHHHHcCCCEEEEe----cCchhhcCC--ChH-HHHHHHHHhcCCcEEEECCcCC
Confidence 566777777765433 244 78999999999999654 111234333 334 7899999999999999999987
Q ss_pred hHHHHHHHHcCCCeeee-cCCC-ChhHHHHHHHhcCCCCcEEeecC--------------CHHH-HHHHHHhCCCEEEEe
Q 037779 104 FVEAQILEAIGVDYVDE-SEVL-TPADEENHINKHNFRVPFVCGCR--------------NLGE-SLRRIREGAAMIRTK 166 (310)
Q Consensus 104 ~~~~~~~~~aGad~v~~-~~~~-~~~~~~~~~~~~~~~l~v~~~v~--------------t~~e-a~~a~~~Gad~I~v~ 166 (310)
.++++.+.++|||.|+. +..+ .|..+.+.++..+..+.+.++++ +..| ++.+.+.|++.|.++
T Consensus 87 ~~~~~~~l~~Gad~V~lg~~~l~~p~~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~~G~~~i~~~ 166 (244)
T 1vzw_A 87 DDTLAAALATGCTRVNLGTAALETPEWVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNKEGCARYVVT 166 (244)
T ss_dssp HHHHHHHHHTTCSEEEECHHHHHCHHHHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHHTTCCCEEEE
T ss_pred HHHHHHHHHcCCCEEEECchHhhCHHHHHHHHHHcCCcEEEEEEccCCEEEEcCcccCCCCHHHHHHHHHhCCCCEEEEe
Confidence 78888899999999983 3222 34445555544432344555654 5444 577788899988776
Q ss_pred cCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHc--
Q 037779 167 GEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQL-- 244 (310)
Q Consensus 167 g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~-- 244 (310)
+....+ . ..+.+++.++.+++..++|| +++|||++++++.+++++
T Consensus 167 ~~~~~~--------------------------~-----~~g~~~~~~~~i~~~~~ipv--ia~GGI~~~~d~~~~~~~~~ 213 (244)
T 1vzw_A 167 DIAKDG--------------------------T-----LQGPNLELLKNVCAATDRPV--VASGGVSSLDDLRAIAGLVP 213 (244)
T ss_dssp EC--------------------------------------CCCHHHHHHHHHTCSSCE--EEESCCCSHHHHHHHHTTGG
T ss_pred ccCccc--------------------------c-----cCCCCHHHHHHHHHhcCCCE--EEECCCCCHHHHHHHHhhcc
Confidence 321110 0 11346788888888778999 678999999999999998
Q ss_pred -CCCEEEEccccccCCCHHHHHHHH
Q 037779 245 -GCDGVFVGSGVFKSGDPVRRARAI 268 (310)
Q Consensus 245 -GadgV~VGsai~~~~dp~~~~~~~ 268 (310)
||++|++||+|+.+++....+.++
T Consensus 214 ~Gadgv~vG~al~~~~~~~~~~~~~ 238 (244)
T 1vzw_A 214 AGVEGAIVGKALYAKAFTLEEALEA 238 (244)
T ss_dssp GTEEEEEECHHHHTTSSCHHHHHHH
T ss_pred CCCceeeeeHHHHcCCCCHHHHHHH
Confidence 999999999999988665444443
No 17
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=99.76 E-value=4.5e-18 Score=152.19 Aligned_cols=200 Identities=16% Similarity=0.143 Sum_probs=144.3
Q ss_pred ccceeeecCCccccC----CC-HHHHHHHHHcCCcEEEecccccchhhh-cCCCCCCCChHHHHHHHhhcCcceEeeccc
Q 037779 28 VGLAQMLRGGVIMDV----VT-PEQARIAEEAGACAVMALERVPADIRA-QGGVARMSDPQLIKQIKSSVTIPVMAKARI 101 (310)
Q Consensus 28 ~~~~~~l~~g~i~~~----~~-~~~a~~~~~~Ga~~I~~l~~~~~d~r~-~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i 101 (310)
.+.++++++|+.... .+ .++++.+.++|+++|+.. |... +.+ ...+.+.+++++ .+++|+++.+++
T Consensus 11 ~g~~vk~~~G~~~~~~~~~~~~~~~a~~~~~~Gad~i~v~-----d~~~~~~~--~~~~~~~i~~i~-~~~ipvi~~Ggi 82 (241)
T 1qo2_A 11 RGKVARMIKGRKENTIFYEKDPVELVEKLIEEGFTLIHVV-----DLSNAIEN--SGENLPVLEKLS-EFAEHIQIGGGI 82 (241)
T ss_dssp TTEEEEEGGGCGGGEEEESSCHHHHHHHHHHTTCCCEEEE-----EHHHHHHC--CCTTHHHHHHGG-GGGGGEEEESSC
T ss_pred CCEEEEEeccccccceecCcCHHHHHHHHHHcCCCEEEEe-----cccccccC--CchhHHHHHHHH-hcCCcEEEECCC
Confidence 567888999987665 34 489999999999998543 3221 111 234588899999 889999999999
Q ss_pred cchHHHHHHHHcCCCeeee-cCCCChhHHHHHHHhcCCCCcEEeecC---------------CHHH-HHHHHHhCCCEEE
Q 037779 102 GHFVEAQILEAIGVDYVDE-SEVLTPADEENHINKHNFRVPFVCGCR---------------NLGE-SLRRIREGAAMIR 164 (310)
Q Consensus 102 ~~~~~~~~~~~aGad~v~~-~~~~~~~~~~~~~~~~~~~l~v~~~v~---------------t~~e-a~~a~~~Gad~I~ 164 (310)
.+.++++.+.++|||.|+. +..+..+++...++..+..+.+.++++ +..| ++++.+.|++.+.
T Consensus 83 ~~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~g~~i~~~~d~~~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~ 162 (241)
T 1qo2_A 83 RSLDYAEKLRKLGYRRQIVSSKVLEDPSFLKSLREIDVEPVFSLDTRGGRVAFKGWLAEEEIDPVSLLKRLKEYGLEEIV 162 (241)
T ss_dssp CSHHHHHHHHHTTCCEEEECHHHHHCTTHHHHHHTTTCEEEEEEEEETTEECCTTCSSCSCCCHHHHHHHHHTTTCCEEE
T ss_pred CCHHHHHHHHHCCCCEEEECchHhhChHHHHHHHHcCCcEEEEEEecCCEEEECCceecCCCCHHHHHHHHHhCCCCEEE
Confidence 8888888899999999983 322222333344443432245556663 5555 4567788999887
Q ss_pred EecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHc
Q 037779 165 TKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQL 244 (310)
Q Consensus 165 v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~ 244 (310)
+++. ++|+. ..+.++++++.+++..++|| |++|||++++|+.+++++
T Consensus 163 ~t~~--------------------------~~~g~-----~~g~~~~~i~~l~~~~~iPv--ia~GGI~~~~d~~~~~~~ 209 (241)
T 1qo2_A 163 HTEI--------------------------EKDGT-----LQEHDFSLTKKIAIEAEVKV--LAAGGISSENSLKTAQKV 209 (241)
T ss_dssp EEET--------------------------THHHH-----TCCCCHHHHHHHHHHHTCEE--EEESSCCSHHHHHHHHHH
T ss_pred EEee--------------------------ccccc-----CCcCCHHHHHHHHHhcCCcE--EEECCCCCHHHHHHHHhc
Confidence 7632 11111 12346888898888778999 678999999999999998
Q ss_pred -----C-CCEEEEccccccCCCHHHHHHHH
Q 037779 245 -----G-CDGVFVGSGVFKSGDPVRRARAI 268 (310)
Q Consensus 245 -----G-adgV~VGsai~~~~dp~~~~~~~ 268 (310)
| +|||+|||+|++++.+...++++
T Consensus 210 ~~~~~G~adgv~vgsal~~~~~~~~~~~~~ 239 (241)
T 1qo2_A 210 HTETNGLLKGVIVGRAFLEGILTVEVMKRY 239 (241)
T ss_dssp HHHTTTSEEEEEECHHHHTTSSCHHHHHHH
T ss_pred ccccCCeEeEEEeeHHHHcCCCCHHHHHHH
Confidence 9 99999999999988766555443
No 18
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=99.75 E-value=9.1e-18 Score=150.09 Aligned_cols=199 Identities=20% Similarity=0.170 Sum_probs=140.8
Q ss_pred ccceeeecCCccccC---CCH-HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccc
Q 037779 28 VGLAQMLRGGVIMDV---VTP-EQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGH 103 (310)
Q Consensus 28 ~~~~~~l~~g~i~~~---~~~-~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~ 103 (310)
.+.++++.+|..... .++ +.++.+.++|+++|+.. ..-..|.+. ... +.++++++.+++|+++++++.+
T Consensus 13 ~g~~V~~~~g~~~~~~~~~d~~~~a~~~~~~Gad~i~v~----~~d~~~~~~--~~~-~~i~~i~~~~~ipv~v~ggi~~ 85 (244)
T 2y88_A 13 EGRAVRLVQGKAGSQTEYGSAVDAALGWQRDGAEWIHLV----DLDAAFGRG--SNH-ELLAEVVGKLDVQVELSGGIRD 85 (244)
T ss_dssp TTEEEEEETTEEEEEEEEEEHHHHHHHHHHTTCSEEEEE----EHHHHTTSC--CCH-HHHHHHHHHCSSEEEEESSCCS
T ss_pred CCEEEEeeccccccceecCCHHHHHHHHHHcCCCEEEEE----cCcccccCC--ChH-HHHHHHHHhcCCcEEEECCCCC
Confidence 566777777765433 244 78999999999999755 111234332 233 8899999999999999999988
Q ss_pred hHHHHHHHHcCCCeeee-cCCC-ChhHHHHHHHhcCCCCcEEeecC------------------C-HHHHHHHHHhCCCE
Q 037779 104 FVEAQILEAIGVDYVDE-SEVL-TPADEENHINKHNFRVPFVCGCR------------------N-LGESLRRIREGAAM 162 (310)
Q Consensus 104 ~~~~~~~~~aGad~v~~-~~~~-~~~~~~~~~~~~~~~l~v~~~v~------------------t-~~ea~~a~~~Gad~ 162 (310)
.++++.+.++|||.|+. ...+ .|..+.+.++..+..+.+.++++ + .+.++.+.+.|++.
T Consensus 86 ~~~~~~~l~~Gad~V~lg~~~l~~p~~~~~~~~~~g~~~~~~ld~~~~~~~~~v~~~g~~~~~~~~~e~~~~~~~~G~~~ 165 (244)
T 2y88_A 86 DESLAAALATGCARVNVGTAALENPQWCARVIGEHGDQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDSEGCSR 165 (244)
T ss_dssp HHHHHHHHHTTCSEEEECHHHHHCHHHHHHHHHHHGGGEEEEEEEEEETTEEEEEEGGGTEEEEEHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHcCCCEEEECchHhhChHHHHHHHHHcCCCEEEEEeccccCCCCEEEECCccCCCCCHHHHHHHHHhCCCCE
Confidence 78889999999999983 3222 34444444444332244444544 2 45567788889998
Q ss_pred EEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHH
Q 037779 163 IRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMM 242 (310)
Q Consensus 163 I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~ 242 (310)
|.+++....+. ..+.+++.++.+++..++|| |++|||++++|+.+++
T Consensus 166 i~~~~~~~~~~-------------------------------~~g~~~~~~~~l~~~~~ipv--ia~GGI~~~~d~~~~~ 212 (244)
T 2y88_A 166 FVVTDITKDGT-------------------------------LGGPNLDLLAGVADRTDAPV--IASGGVSSLDDLRAIA 212 (244)
T ss_dssp EEEEETTTTTT-------------------------------TSCCCHHHHHHHHTTCSSCE--EEESCCCSHHHHHHHH
T ss_pred EEEEecCCccc-------------------------------cCCCCHHHHHHHHHhCCCCE--EEECCCCCHHHHHHHH
Confidence 88764311110 01336788888888778999 6789999999999999
Q ss_pred Hc---CCCEEEEccccccCCCHHHHHH
Q 037779 243 QL---GCDGVFVGSGVFKSGDPVRRAR 266 (310)
Q Consensus 243 ~~---GadgV~VGsai~~~~dp~~~~~ 266 (310)
++ |+++|++||+|+.+++....+.
T Consensus 213 ~~~~~Gad~v~vG~al~~~~~~~~~~~ 239 (244)
T 2y88_A 213 TLTHRGVEGAIVGKALYARRFTLPQAL 239 (244)
T ss_dssp TTGGGTEEEEEECHHHHTTSSCHHHHH
T ss_pred hhccCCCCEEEEcHHHHCCCcCHHHHH
Confidence 98 9999999999999886654433
No 19
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=99.74 E-value=5.4e-17 Score=143.26 Aligned_cols=179 Identities=22% Similarity=0.230 Sum_probs=132.6
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEe---ecc------cc-chHHHHHHHHcCC
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMA---KAR------IG-HFVEAQILEAIGV 115 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~---kd~------i~-~~~~~~~~~~aGa 115 (310)
++++++.++|+++++.. +++.++++++.+++|++. +++ +. +.+.++.+.++|+
T Consensus 27 ~~a~~~~~~Ga~~i~~~-----------------~~~~i~~i~~~~~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Ga 89 (223)
T 1y0e_A 27 KMALAAYEGGAVGIRAN-----------------TKEDILAIKETVDLPVIGIVKRDYDHSDVFITATSKEVDELIESQC 89 (223)
T ss_dssp HHHHHHHHHTCSEEEEE-----------------SHHHHHHHHHHCCSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTC
T ss_pred HHHHHHHHCCCeeeccC-----------------CHHHHHHHHHhcCCCEEeeeccCCCccccccCCcHHHHHHHHhCCC
Confidence 78999999999998421 167899999999999962 221 11 2356778889999
Q ss_pred Ceee-ecCCC-----ChhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhccee
Q 037779 116 DYVD-ESEVL-----TPADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIR 189 (310)
Q Consensus 116 d~v~-~~~~~-----~~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~ 189 (310)
|.|+ ..... +..++++.+++..+++.++++++|.+|+.++.+.|+|+++++...+++..
T Consensus 90 d~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~~t~~e~~~~~~~G~d~i~~~~~g~t~~~--------------- 154 (223)
T 1y0e_A 90 EVIALDATLQQRPKETLDELVSYIRTHAPNVEIMADIATVEEAKNAARLGFDYIGTTLHGYTSYT--------------- 154 (223)
T ss_dssp SEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTCSEEECTTTTSSTTS---------------
T ss_pred CEEEEeeecccCcccCHHHHHHHHHHhCCCceEEecCCCHHHHHHHHHcCCCEEEeCCCcCcCCC---------------
Confidence 9987 32221 23577777777545788999999999999999999999987543333210
Q ss_pred cccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHH
Q 037779 190 VLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIV 269 (310)
Q Consensus 190 ~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~ 269 (310)
.... .....++.++.+++..++|| +++|||++++++.+++++|||+|++||+|++ |...+++|+
T Consensus 155 --~~~~---------~~~~~~~~~~~~~~~~~ipv--ia~GGI~~~~~~~~~~~~Gad~v~vG~al~~---p~~~~~~~~ 218 (223)
T 1y0e_A 155 --QGQL---------LYQNDFQFLKDVLQSVDAKV--IAEGNVITPDMYKRVMDLGVHCSVVGGAITR---PKEITKRFV 218 (223)
T ss_dssp --TTCC---------TTHHHHHHHHHHHHHCCSEE--EEESSCCSHHHHHHHHHTTCSEEEECHHHHC---HHHHHHHHH
T ss_pred --CCCC---------CCcccHHHHHHHHhhCCCCE--EEecCCCCHHHHHHHHHcCCCEEEEChHHcC---cHHHHHHHH
Confidence 0000 01224667777777667899 6789999999999999999999999999997 777888887
Q ss_pred HHH
Q 037779 270 QAV 272 (310)
Q Consensus 270 ~~~ 272 (310)
+.+
T Consensus 219 ~~~ 221 (223)
T 1y0e_A 219 QVM 221 (223)
T ss_dssp HTT
T ss_pred HHh
Confidence 654
No 20
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=99.72 E-value=1.7e-16 Score=142.52 Aligned_cols=186 Identities=18% Similarity=0.202 Sum_probs=131.0
Q ss_pred CCH-HHHHHHHHcCCcEEEecccccchhh-hcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeeee
Q 037779 43 VTP-EQARIAEEAGACAVMALERVPADIR-AQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVDE 120 (310)
Q Consensus 43 ~~~-~~a~~~~~~Ga~~I~~l~~~~~d~r-~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~~ 120 (310)
.++ ++++.++++|+++++... .. .+.+ ...+.+.++++++.+++|+++++++.+.++++.+.++|||.|+.
T Consensus 30 ~d~~~~a~~~~~~Gad~i~v~d-----~~~~~~~--~~~~~~~i~~i~~~~~ipvi~~ggI~~~~~~~~~~~~Gad~V~l 102 (253)
T 1thf_D 30 GDPVELGKFYSEIGIDELVFLD-----ITASVEK--RKTMLELVEKVAEQIDIPFTVGGGIHDFETASELILRGADKVSI 102 (253)
T ss_dssp TCHHHHHHHHHHTTCCEEEEEE-----SSCSSSH--HHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred cCHHHHHHHHHHcCCCEEEEEC-----CchhhcC--CcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCCEEEE
Confidence 454 789999999999986552 11 1111 12236778899998999999999998878888899999999984
Q ss_pred c-CCC-ChhHHHHHHHhcCCC-CcEEeecC-------------------C-HHHHHHHHHhCCCEEEEecCCCCCchHHH
Q 037779 121 S-EVL-TPADEENHINKHNFR-VPFVCGCR-------------------N-LGESLRRIREGAAMIRTKGEAGTGNIVEA 177 (310)
Q Consensus 121 ~-~~~-~~~~~~~~~~~~~~~-l~v~~~v~-------------------t-~~ea~~a~~~Gad~I~v~g~~~~~~~~~~ 177 (310)
. ..+ .|..+.+.++..+.. +.+.++++ + .+.++.+.+.|++.+.++....++.
T Consensus 103 g~~~l~~p~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~g~---- 178 (253)
T 1thf_D 103 NTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGT---- 178 (253)
T ss_dssp SHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHTTCSEEEEEETTTTTS----
T ss_pred ChHHHhChHHHHHHHHHcCCCcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHHHHCCCCEEEEEeccCCCC----
Confidence 3 222 333444444443322 34555653 2 3446777788998877753211110
Q ss_pred HHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEcccccc
Q 037779 178 VRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 178 ~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~ 257 (310)
..+.++++++.+++..++|| |++|||++++|+.+++++|+|+|++||+|++
T Consensus 179 ---------------------------~~g~~~~~~~~l~~~~~ipv--ia~GGI~~~~d~~~~~~~Gadgv~vGsal~~ 229 (253)
T 1thf_D 179 ---------------------------KSGYDTEMIRFVRPLTTLPI--IASGGAGKMEHFLEAFLAGADAALAASVFHF 229 (253)
T ss_dssp ---------------------------CSCCCHHHHHHHGGGCCSCE--EEESCCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred ---------------------------CCCCCHHHHHHHHHhcCCCE--EEECCCCCHHHHHHHHHcCChHHHHHHHHHc
Confidence 12346888888888778999 6789999999999999999999999999999
Q ss_pred CC-CHHHHHHHH
Q 037779 258 SG-DPVRRARAI 268 (310)
Q Consensus 258 ~~-dp~~~~~~~ 268 (310)
++ ++.+..+.+
T Consensus 230 ~~~~~~~~~~~l 241 (253)
T 1thf_D 230 REIDVRELKEYL 241 (253)
T ss_dssp TCSCHHHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 98 665555544
No 21
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=99.72 E-value=1.2e-16 Score=143.43 Aligned_cols=183 Identities=21% Similarity=0.241 Sum_probs=128.5
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeeee-cCC
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVDE-SEV 123 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~~-~~~ 123 (310)
.++++.+.++|+++|+.. |.... +.....+.+.++++++.+++|+++..++.+.++++.+.++|||.|+. +..
T Consensus 34 ~~~a~~~~~~Gad~i~v~-----d~~~~-~~~~~~~~~~i~~i~~~~~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~ 107 (252)
T 1ka9_F 34 VEAARAYDEAGADELVFL-----DISAT-HEERAILLDVVARVAERVFIPLTVGGGVRSLEDARKLLLSGADKVSVNSAA 107 (252)
T ss_dssp HHHHHHHHHHTCSCEEEE-----ECCSS-TTCHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHHTCSEEEECHHH
T ss_pred HHHHHHHHHcCCCEEEEE-----cCCcc-ccCccccHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEChHH
Confidence 488999999999998554 22111 11112236678999999999999999998888899999999999983 322
Q ss_pred C-ChhHHHHHHHhcCCC-CcEEeecC--------------------CHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHH
Q 037779 124 L-TPADEENHINKHNFR-VPFVCGCR--------------------NLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHV 181 (310)
Q Consensus 124 ~-~~~~~~~~~~~~~~~-l~v~~~v~--------------------t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~ 181 (310)
+ .+..+.+.....+.. +.+.++++ +.+.++++.+.|++.+.+++...++.
T Consensus 108 l~~p~~~~~~~~~~~~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~g~-------- 179 (252)
T 1ka9_F 108 VRRPELIRELADHFGAQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVELGAGEILLTSMDRDGT-------- 179 (252)
T ss_dssp HHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHHTCCEEEEEETTTTTT--------
T ss_pred HhCcHHHHHHHHHcCCCcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHHHcCCCEEEEecccCCCC--------
Confidence 2 233343433333322 34555553 24567788889999877763211110
Q ss_pred HHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCH
Q 037779 182 RSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDP 261 (310)
Q Consensus 182 ~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp 261 (310)
..+.++++++.+++..++|| |++|||++++|+.+++++|+|||+|||+|++++++
T Consensus 180 -----------------------~~g~~~~~i~~l~~~~~ipv--ia~GGI~~~~d~~~~~~~Gadgv~vgsal~~~~~~ 234 (252)
T 1ka9_F 180 -----------------------KEGYDLRLTRMVAEAVGVPV--IASGGAGRMEHFLEAFQAGAEAALAASVFHFGEIP 234 (252)
T ss_dssp -----------------------CSCCCHHHHHHHHHHCSSCE--EEESCCCSHHHHHHHHHTTCSEEEESHHHHTTSSC
T ss_pred -----------------------cCCCCHHHHHHHHHHcCCCE--EEeCCCCCHHHHHHHHHCCCHHHHHHHHHHcCCCC
Confidence 12346888899988778999 67899999999999999999999999999999844
Q ss_pred HHHHH
Q 037779 262 VRRAR 266 (310)
Q Consensus 262 ~~~~~ 266 (310)
...+.
T Consensus 235 ~~~~~ 239 (252)
T 1ka9_F 235 IPKLK 239 (252)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 43333
No 22
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=99.68 E-value=3.1e-17 Score=147.34 Aligned_cols=198 Identities=16% Similarity=0.209 Sum_probs=66.2
Q ss_pred eeecCCccccCCC-HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHHHH
Q 037779 32 QMLRGGVIMDVVT-PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQIL 110 (310)
Q Consensus 32 ~~l~~g~i~~~~~-~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~ 110 (310)
+..++|.-....+ .++++.++++|+++|+.. +.... +.....+.+.++++++.+++||++..++.+.+.++.+
T Consensus 24 v~~~~~~~~~~~~~~~~a~~~~~~G~~~i~v~-----d~~~~-~~~~~~~~~~i~~i~~~~~ipvi~~Ggi~~~~~~~~~ 97 (247)
T 3tdn_A 24 VFTYSGKKNTGILLRDWVVEVEKRGAGEILLT-----SIDRD-GTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEA 97 (247)
T ss_dssp EEETTTTEEEEEEHHHHHHHHHHTTCSEEEEE-----ETTTT-TCSSCCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHH
T ss_pred EEEcCCeecCCCCHHHHHHHHHHcCCCEEEEE-----ecCcc-cCCCcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHH
Confidence 3444444333334 489999999999999543 22111 1112346889999999999999999999887888888
Q ss_pred HHcCCCeee-ecCCC-ChhHHHHHHHhcCCC-CcEEeecCCH--------------------HHHHHHHHhCCCEEEEec
Q 037779 111 EAIGVDYVD-ESEVL-TPADEENHINKHNFR-VPFVCGCRNL--------------------GESLRRIREGAAMIRTKG 167 (310)
Q Consensus 111 ~~aGad~v~-~~~~~-~~~~~~~~~~~~~~~-l~v~~~v~t~--------------------~ea~~a~~~Gad~I~v~g 167 (310)
.++|||.|+ .+..+ .|..+.+.....+.. +.+.+++++. +.++.+.+.|++.+.++.
T Consensus 98 l~~Gad~V~ig~~~l~dp~~~~~~~~~~g~~~iv~~ld~~~~~~~~~v~~~g~~~~~~~~~~~~a~~~~~~G~~~i~~t~ 177 (247)
T 3tdn_A 98 FLRGADKVSINTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTS 177 (247)
T ss_dssp HHTTCSEECCSHHHHHCTHHHHHHHHHHC---------------------------------------------------
T ss_pred HHcCCCeeehhhHHhhChHHHHHHHHHhCCCcEEEEEEeccCCCCEEEEECCCcccCCCCHHHHHHHHHhcCCCEEEEec
Confidence 999999998 33322 233333333333322 3333444321 112333345555554432
Q ss_pred CCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCC
Q 037779 168 EAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCD 247 (310)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~Gad 247 (310)
.++++. ..+.++++++.+++..++|| |++|||++++|+.+++++|||
T Consensus 178 --------------------------~~~~g~-----~~g~~~~~~~~i~~~~~iPv--ia~GGI~~~~d~~~~~~~Gad 224 (247)
T 3tdn_A 178 --------------------------IDRDGT-----KSGYDTEMIRFVRPLTTLPI--IASGGAGKMEHFLEAFLRGAD 224 (247)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------ccCCCC-----cCCCCHHHHHHHHHhCCCCE--EEECCCCCHHHHHHHHHcCCc
Confidence 122211 11335677788877778999 678999999999999999999
Q ss_pred EEEEccccccCCCHHHHHHHH
Q 037779 248 GVFVGSGVFKSGDPVRRARAI 268 (310)
Q Consensus 248 gV~VGsai~~~~dp~~~~~~~ 268 (310)
+|+|||+|+.++|+...+++.
T Consensus 225 ~v~vg~al~~~p~~~~~~~~~ 245 (247)
T 3tdn_A 225 KVSINTAAVENPSLITQIAQT 245 (247)
T ss_dssp ---------------------
T ss_pred HhhccHHHHcCcHHHHHHHHh
Confidence 999999999999988766554
No 23
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=99.67 E-value=2e-15 Score=132.30 Aligned_cols=191 Identities=20% Similarity=0.272 Sum_probs=134.3
Q ss_pred ccccceeeecCCccccCCCHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeec-cccch
Q 037779 26 VKVGLAQMLRGGVIMDVVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKA-RIGHF 104 (310)
Q Consensus 26 ~~~~~~~~l~~g~i~~~~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd-~i~~~ 104 (310)
+..++...++.-...+ -.+.++.+.++|+++|+ ++ ... ....+.++++++.+++|+++.. .+.+.
T Consensus 5 ~~~~i~~~i~~~d~~~--~~~~~~~~~~~G~~~i~-l~-------~~~----~~~~~~i~~i~~~~~~~l~vg~g~~~~~ 70 (212)
T 2v82_A 5 TKLPLIAILRGITPDE--ALAHVGAVIDAGFDAVE-IP-------LNS----PQWEQSIPAIVDAYGDKALIGAGTVLKP 70 (212)
T ss_dssp SSSCEEEECTTCCHHH--HHHHHHHHHHHTCCEEE-EE-------TTS----TTHHHHHHHHHHHHTTTSEEEEECCCSH
T ss_pred CCCCEEEEEeCCCHHH--HHHHHHHHHHCCCCEEE-Ee-------CCC----hhHHHHHHHHHHhCCCCeEEEeccccCH
Confidence 3456666666622110 03679999999999984 31 111 1124677788877788887742 22344
Q ss_pred HHHHHHHHcCCCeeeecCCCChhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHh
Q 037779 105 VEAQILEAIGVDYVDESEVLTPADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSV 184 (310)
Q Consensus 105 ~~~~~~~~aGad~v~~~~~~~~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~ 184 (310)
+.++.+.++|||+|+... ...++.+.++. .+..++++++|++|+..+.+.|+|++.++.. .
T Consensus 71 ~~i~~a~~~Gad~V~~~~--~~~~~~~~~~~--~g~~~~~g~~t~~e~~~a~~~G~d~v~v~~t---~------------ 131 (212)
T 2v82_A 71 EQVDALARMGCQLIVTPN--IHSEVIRRAVG--YGMTVCPGCATATEAFTALEAGAQALKIFPS---S------------ 131 (212)
T ss_dssp HHHHHHHHTTCCEEECSS--CCHHHHHHHHH--TTCEEECEECSHHHHHHHHHTTCSEEEETTH---H------------
T ss_pred HHHHHHHHcCCCEEEeCC--CCHHHHHHHHH--cCCCEEeecCCHHHHHHHHHCCCCEEEEecC---C------------
Confidence 678899999999998332 23455555554 3566677799999999999999999997410 0
Q ss_pred hcceecccccCchhHHhhhccCCCcHHHHHHHHhcC--CCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccC----
Q 037779 185 MGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLG--RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKS---- 258 (310)
Q Consensus 185 ~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~--~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~---- 258 (310)
. ...+.++.+.+.. ++|| ++.|||+ ++++.+++++|+++|++||+|+++
T Consensus 132 -------------~---------~g~~~~~~l~~~~~~~ipv--ia~GGI~-~~~i~~~~~~Ga~gv~vGsai~~~~~~~ 186 (212)
T 2v82_A 132 -------------A---------FGPQYIKALKAVLPSDIAV--FAVGGVT-PENLAQWIDAGCAGAGLGSDLYRAGQSV 186 (212)
T ss_dssp -------------H---------HCHHHHHHHHTTSCTTCEE--EEESSCC-TTTHHHHHHHTCSEEEECTTTCCTTCCH
T ss_pred -------------C---------CCHHHHHHHHHhccCCCeE--EEeCCCC-HHHHHHHHHcCCCEEEEChHHhCCCCCH
Confidence 0 0235556666544 3888 6789995 999999999999999999999998
Q ss_pred CCHHHHHHHHHHHHHc
Q 037779 259 GDPVRRARAIVQAVTN 274 (310)
Q Consensus 259 ~dp~~~~~~~~~~~~~ 274 (310)
+||.+.+++|++.+++
T Consensus 187 ~d~~~~~~~l~~~~~~ 202 (212)
T 2v82_A 187 ERTAQQAAAFVKAYRE 202 (212)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6899999988887753
No 24
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=99.67 E-value=4.8e-15 Score=131.77 Aligned_cols=175 Identities=21% Similarity=0.321 Sum_probs=132.2
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEe---ecc------cc-chHHHHHHHHcC
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMA---KAR------IG-HFVEAQILEAIG 114 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~---kd~------i~-~~~~~~~~~~aG 114 (310)
.++++.+.++|+++++ + . +++.++.+++.+++|++. +++ +. ..++++.+.++|
T Consensus 39 ~~~a~~~~~~G~~~i~-~-------~---------~~~~i~~i~~~~~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~G 101 (234)
T 1yxy_A 39 PLMAKAAQEAGAVGIR-A-------N---------SVRDIKEIQAITDLPIIGIIKKDYPPQEPFITATMTEVDQLAALN 101 (234)
T ss_dssp HHHHHHHHHHTCSEEE-E-------E---------SHHHHHHHHTTCCSCEEEECBCCCTTSCCCBSCSHHHHHHHHTTT
T ss_pred HHHHHHHHHCCCcEee-c-------C---------CHHHHHHHHHhCCCCEEeeEcCCCCccccccCChHHHHHHHHHcC
Confidence 5789999999999984 2 1 167899999999999952 222 22 236778888999
Q ss_pred CCeeeec-CC------CChhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEE--EecCCCCCchHHHHHHHHHhh
Q 037779 115 VDYVDES-EV------LTPADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIR--TKGEAGTGNIVEAVRHVRSVM 185 (310)
Q Consensus 115 ad~v~~~-~~------~~~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~--v~g~~~~~~~~~~~~~~~~~~ 185 (310)
||.|+.+ .. ....++++.+++...++.++++++|.+++..+.+.|+|+|+ +.+... +.
T Consensus 102 ad~V~l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~~t~~ea~~a~~~Gad~i~~~v~g~~~-~~------------ 168 (234)
T 1yxy_A 102 IAVIAMDCTKRDRHDGLDIASFIRQVKEKYPNQLLMADISTFDEGLVAHQAGIDFVGTTLSGYTP-YS------------ 168 (234)
T ss_dssp CSEEEEECCSSCCTTCCCHHHHHHHHHHHCTTCEEEEECSSHHHHHHHHHTTCSEEECTTTTSST-TS------------
T ss_pred CCEEEEcccccCCCCCccHHHHHHHHHHhCCCCeEEEeCCCHHHHHHHHHcCCCEEeeeccccCC-CC------------
Confidence 9999732 21 12356777777754578899999999999999999999993 433211 10
Q ss_pred cceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHH
Q 037779 186 GDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRA 265 (310)
Q Consensus 186 ~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~ 265 (310)
.. .....+++++.+.+. ++|| +++|||+|++++.+++++|||+|++||+|++ |...+
T Consensus 169 -----~~------------~~~~~~~~i~~~~~~-~ipv--ia~GGI~s~~~~~~~~~~Gad~v~vGsal~~---p~~~~ 225 (234)
T 1yxy_A 169 -----RQ------------EAGPDVALIEALCKA-GIAV--IAEGKIHSPEEAKKINDLGVAGIVVGGAITR---PKEIA 225 (234)
T ss_dssp -----CC------------SSSCCHHHHHHHHHT-TCCE--EEESCCCSHHHHHHHHTTCCSEEEECHHHHC---HHHHH
T ss_pred -----cC------------CCCCCHHHHHHHHhC-CCCE--EEECCCCCHHHHHHHHHCCCCEEEEchHHhC---hHHHH
Confidence 00 013356778888776 8999 6789999999999999999999999999998 88888
Q ss_pred HHHHHHH
Q 037779 266 RAIVQAV 272 (310)
Q Consensus 266 ~~~~~~~ 272 (310)
++|++.+
T Consensus 226 ~~l~~~~ 232 (234)
T 1yxy_A 226 ERFIEAL 232 (234)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 8887765
No 25
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=99.64 E-value=5.6e-15 Score=146.44 Aligned_cols=187 Identities=15% Similarity=0.155 Sum_probs=130.6
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeee-ecCC
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVD-ESEV 123 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~-~~~~ 123 (310)
.+.++++.++|+++| +++....+.+.+ ......++++++..++|++++|++. .+.++|||+|| ..+.
T Consensus 28 ~~~ve~al~~Gv~~v-QlR~K~~~~~~~-----~~~a~~l~~l~~~~~v~liIND~~d------lA~~~gAdGVHLgq~d 95 (540)
T 3nl6_A 28 YGQVEAGLQNGVTLV-QIREKDADTKFF-----IEEALQIKELCHAHNVPLIINDRID------VAMAIGADGIHVGQDD 95 (540)
T ss_dssp HHHHHHHHHTTCSEE-EECCSSSCTTHH-----HHHHHHHHHHHHHTTCCEEECSCSH------HHHHTTCSEEEECTTS
T ss_pred HHHHHHHHHCCCCEE-EEecCCCCHHHH-----HHHHHHHHHHHHhcCCEEEEeCcHH------HHHHcCCCEEEEChhh
Confidence 378999999999999 553111111111 1113345566677799999998754 57789999999 4455
Q ss_pred CChhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhC---CCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHH
Q 037779 124 LTPADEENHINKHNFRVPFVCGCRNLGESLRRIREG---AAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVF 200 (310)
Q Consensus 124 ~~~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~G---ad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~ 200 (310)
++..+..+.+ +.+..+.+++||.+|+..+.+.| +|||++. +.|.+ .++...
T Consensus 96 l~~~~ar~~l---g~~~iiG~S~ht~eea~~A~~~G~~~aDYv~~G-pvf~T---------------------~tK~~~- 149 (540)
T 3nl6_A 96 MPIPMIRKLV---GPDMVIGWSVGFPEEVDELSKMGPDMVDYIGVG-TLFPT---------------------LTKKNP- 149 (540)
T ss_dssp SCHHHHHHHH---CTTSEEEEEECSHHHHHHHHHTCC--CCEEEES-CCSCC---------------------CCCC---
T ss_pred cCHHHHHHHh---CCCCEEEEECCCHHHHHHHHHcCCCCCCEEEEc-CCCCC---------------------CCCCCc-
Confidence 5544444333 46789999999999999999999 9999984 43321 111000
Q ss_pred hhhccCCCcHHHHHHHHhc------CCCCEEEEccCCCCCHHHHHHHHH--------cCCCEEEEccccccCCCHHHHHH
Q 037779 201 TFAKNIAAPYDLVMQTKQL------GRLPVVHFAAGGVATPADAAMMMQ--------LGCDGVFVGSGVFKSGDPVRRAR 266 (310)
Q Consensus 201 ~~~~~~~~~~~l~~~i~~~------~~iPVv~ia~GGI~t~~di~~~~~--------~GadgV~VGsai~~~~dp~~~~~ 266 (310)
......++.++.+.+. .++|+++ -||| +++++.++++ +|++||.|+|+|++++||.+.++
T Consensus 150 ---~~~~~G~~~l~~i~~~~~~~~~~~iPvvA--IGGI-~~~ni~~v~~~~~~~g~~~GadgvAVvsaI~~a~dp~~a~~ 223 (540)
T 3nl6_A 150 ---KKAPMGTAGAIRVLDALERNNAHWCRTVG--IGGL-HPDNIERVLYQCVSSNGKRSLDGICVVSDIIASLDAAKSTK 223 (540)
T ss_dssp -----CCCHHHHHHHHHHHHHHTTCTTCEEEE--ESSC-CTTTHHHHHHHCBCTTSSCBCSCEEESHHHHTCTTHHHHHH
T ss_pred ---CCCCCCHHHHHHHHHHHHhhccCCCCEEE--EcCC-CHHHHHHHHHhhcccccccCceEEEEeHHHhcCCCHHHHHH
Confidence 0001124444444432 4789965 4999 6999999998 89999999999999999999999
Q ss_pred HHHHHHHcC
Q 037779 267 AIVQAVTNY 275 (310)
Q Consensus 267 ~~~~~~~~~ 275 (310)
+|++.++..
T Consensus 224 ~l~~~~~~~ 232 (540)
T 3nl6_A 224 ILRGLIDKT 232 (540)
T ss_dssp HHHHHHHCC
T ss_pred HHHHHHHhC
Confidence 999999874
No 26
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=99.63 E-value=1.8e-14 Score=129.23 Aligned_cols=211 Identities=17% Similarity=0.139 Sum_probs=142.6
Q ss_pred ccceeeecCCcccc----CCCH-HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeecccc
Q 037779 28 VGLAQMLRGGVIMD----VVTP-EQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIG 102 (310)
Q Consensus 28 ~~~~~~l~~g~i~~----~~~~-~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~ 102 (310)
.+.+++|.+|.... ..+| ++|+.|.+.|+++++.+ +.+. .+.|. ..+.+.++++.+.+.+|+.+...+.
T Consensus 12 ~G~vVrlv~G~~~~~~~~~~dP~~~a~~~~~~gad~lhvv---Dld~-a~~~~--~~~~~~i~~i~~~~~~pl~vGGGIr 85 (243)
T 4gj1_A 12 DGEVVRLVKGDYEQKKVYKYNPLKKFKEYEKAGAKELHLV---DLTG-AKDPS--KRQFALIEKLAKEVSVNLQVGGGIR 85 (243)
T ss_dssp TTEEEEEECSSSCEEEECCCCHHHHHHHHHHHTCCEEEEE---EHHH-HHCGG--GCCHHHHHHHHHHCCSEEEEESSCC
T ss_pred CCeEEEEEccCcCCCcEeCCCHHHHHHHHHHCCCCEEEEE---ecCc-ccccc--hhHHHHHHHHHHhcCCCeEeccccc
Confidence 56777887776543 3566 89999999999998665 1122 22222 4568999999999999999999998
Q ss_pred chHHHHHHHHcCCCeee-ecCCCChhHHHHHH-HhcCCC-CcEEeecCCHHHHHHHHHhCCCEEEEecCCC-C-CchHHH
Q 037779 103 HFVEAQILEAIGVDYVD-ESEVLTPADEENHI-NKHNFR-VPFVCGCRNLGESLRRIREGAAMIRTKGEAG-T-GNIVEA 177 (310)
Q Consensus 103 ~~~~~~~~~~aGad~v~-~~~~~~~~~~~~~~-~~~~~~-l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~-~-~~~~~~ 177 (310)
+.+.++.+.++||+.|. .+.....+++++.+ +..+.. +.+.+++... +--++.++|+.. + ....+.
T Consensus 86 s~e~~~~~l~~GadkVii~t~a~~~p~li~e~~~~~g~q~iv~~iD~~~~---------~~~~v~~~gw~~~~~~~~~~~ 156 (243)
T 4gj1_A 86 SKEEVKALLDCGVKRVVIGSMAIKDATLCLEILKEFGSEAIVLALDTILK---------EDYVVAVNAWQEASDKKLMEV 156 (243)
T ss_dssp CHHHHHHHHHTTCSEEEECTTTTTCHHHHHHHHHHHCTTTEEEEEEEEES---------SSEEEC--------CCBHHHH
T ss_pred cHHHHHHHHHcCCCEEEEccccccCCchHHHHHhcccCceEEEEEEEEeC---------CCCEEEecCceecccchHHHH
Confidence 88899999999999988 55555555555444 434333 3333443110 101344555432 2 234456
Q ss_pred HHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhc-CCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccc
Q 037779 178 VRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQL-GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVF 256 (310)
Q Consensus 178 ~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~-~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~ 256 (310)
++...+.+.....++.+++|++. .+.+.++++.+.+. .++|| |++||+++.+|+.++ +.+++|+++||+|+
T Consensus 157 ~~~~~~~g~~eil~t~Id~DGt~-----~G~d~~l~~~l~~~~~~ipv--iasGGv~~~~Dl~~l-~~~~~gvivg~Al~ 228 (243)
T 4gj1_A 157 LDFYSNKGLKHILCTDISKDGTM-----QGVNVRLYKLIHEIFPNICI--QASGGVASLKDLENL-KGICSGVIVGKALL 228 (243)
T ss_dssp HHHHHTTTCCEEEEEETTC----------CCCHHHHHHHHHHCTTSEE--EEESCCCSHHHHHHT-TTTCSEEEECHHHH
T ss_pred HHHHhhcCCcEEEeeeecccccc-----cCCCHHHHHHHHHhcCCCCE--EEEcCCCCHHHHHHH-HccCchhehHHHHH
Confidence 66666666667778888888873 56789999999875 46899 789999999999987 55799999999999
Q ss_pred cCCCH
Q 037779 257 KSGDP 261 (310)
Q Consensus 257 ~~~dp 261 (310)
...=.
T Consensus 229 ~g~i~ 233 (243)
T 4gj1_A 229 DGVFS 233 (243)
T ss_dssp TTSSC
T ss_pred CCCCC
Confidence 87633
No 27
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=99.62 E-value=7.6e-15 Score=130.80 Aligned_cols=184 Identities=19% Similarity=0.202 Sum_probs=125.5
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeeeec-CC
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVDES-EV 123 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~~~-~~ 123 (310)
.+.++.+.++|+++++... .. ..+.....+.+.++++++.+++|+++.+++.+.+.++.+.++|||.|+.. ..
T Consensus 36 ~~~a~~~~~~G~d~i~v~~-----~~-~~~~~~~~~~~~i~~i~~~~~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~~~~ 109 (253)
T 1h5y_A 36 VEMAVRYEEEGADEIAILD-----IT-AAPEGRATFIDSVKRVAEAVSIPVLVGGGVRSLEDATTLFRAGADKVSVNTAA 109 (253)
T ss_dssp HHHHHHHHHTTCSCEEEEE-----CC-CCTTTHHHHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHHTCSEEEESHHH
T ss_pred HHHHHHHHHcCCCEEEEEe-----CC-ccccCCcccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEEChHH
Confidence 4789999999999985441 11 00000112367889999999999999999887778888889999999843 22
Q ss_pred C-ChhHHHHHHHhcCCC-CcEEeecC-------------------C-HHHHHHHHHhCCCEEEEecCCCCCchHHHHHHH
Q 037779 124 L-TPADEENHINKHNFR-VPFVCGCR-------------------N-LGESLRRIREGAAMIRTKGEAGTGNIVEAVRHV 181 (310)
Q Consensus 124 ~-~~~~~~~~~~~~~~~-l~v~~~v~-------------------t-~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~ 181 (310)
+ .+..+.+..+..+.. +.+.++++ + .+.++.+.+.|+|+|.+++...++.
T Consensus 110 ~~~~~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~~~G~d~i~~~~~~~~g~-------- 181 (253)
T 1h5y_A 110 VRNPQLVALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEELGAGEILLTSIDRDGT-------- 181 (253)
T ss_dssp HHCTHHHHHHHHHHCGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHHHHTCSEEEEEETTTTTT--------
T ss_pred hhCcHHHHHHHHHcCCCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHHhCCCCEEEEecccCCCC--------
Confidence 2 233344444433321 22333332 2 3456777889999998874322111
Q ss_pred HHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCH
Q 037779 182 RSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDP 261 (310)
Q Consensus 182 ~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp 261 (310)
..+.+++.++.+++..++|+ +++|||++++++.+++++||++|++||+|++.+++
T Consensus 182 -----------------------~~~~~~~~i~~l~~~~~~pv--ia~GGi~~~~~~~~~~~~Ga~~v~vgsal~~~~~~ 236 (253)
T 1h5y_A 182 -----------------------GLGYDVELIRRVADSVRIPV--IASGGAGRVEHFYEAAAAGADAVLAASLFHFRVLS 236 (253)
T ss_dssp -----------------------CSCCCHHHHHHHHHHCSSCE--EEESCCCSHHHHHHHHHTTCSEEEESHHHHTTSSC
T ss_pred -----------------------cCcCCHHHHHHHHHhcCCCE--EEeCCCCCHHHHHHHHHcCCcHHHHHHHHHcCCCC
Confidence 01235677788877678899 67899998999999999999999999999998865
Q ss_pred HHHHHH
Q 037779 262 VRRARA 267 (310)
Q Consensus 262 ~~~~~~ 267 (310)
.+.+.+
T Consensus 237 ~~~~~~ 242 (253)
T 1h5y_A 237 IAQVKR 242 (253)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444433
No 28
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=99.58 E-value=8e-14 Score=122.16 Aligned_cols=185 Identities=15% Similarity=0.123 Sum_probs=128.5
Q ss_pred ccceeeecCCccccCCC-HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHH
Q 037779 28 VGLAQMLRGGVIMDVVT-PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVE 106 (310)
Q Consensus 28 ~~~~~~l~~g~i~~~~~-~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~ 106 (310)
.++...+++-. ..+ .+.++++.++|+++| ++ +.+. ....+.++.+++ .++.+.....+ +.++
T Consensus 13 ~~ii~vi~~~~---~~~~~~~~~~l~~gGv~~i-el-------~~k~----~~~~~~i~~~~~-~~~~~gag~vl-~~d~ 75 (207)
T 2yw3_A 13 SRLLPLLTVRG---GEDLLGLARVLEEEGVGAL-EI-------TLRT----EKGLEALKALRK-SGLLLGAGTVR-SPKE 75 (207)
T ss_dssp HCEEEEECCCS---CCCHHHHHHHHHHTTCCEE-EE-------ECSS----THHHHHHHHHTT-SSCEEEEESCC-SHHH
T ss_pred CCEEEEEeCCC---HHHHHHHHHHHHHcCCCEE-EE-------eCCC----hHHHHHHHHHhC-CCCEEEeCeEe-eHHH
Confidence 34555555521 122 578999999999998 45 2111 011456677777 56666555533 4588
Q ss_pred HHHHHHcCCCeeeecCCCChhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhc
Q 037779 107 AQILEAIGVDYVDESEVLTPADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMG 186 (310)
Q Consensus 107 ~~~~~~aGad~v~~~~~~~~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~ 186 (310)
++.+.++|||+++.+. ...++.+..+.. +++++.+++|+.|+.++.+.|+||++++....
T Consensus 76 ~~~A~~~GAd~v~~~~--~d~~v~~~~~~~--g~~~i~G~~t~~e~~~A~~~Gad~v~~fpa~~---------------- 135 (207)
T 2yw3_A 76 AEAALEAGAAFLVSPG--LLEEVAALAQAR--GVPYLPGVLTPTEVERALALGLSALKFFPAEP---------------- 135 (207)
T ss_dssp HHHHHHHTCSEEEESS--CCHHHHHHHHHH--TCCEEEEECSHHHHHHHHHTTCCEEEETTTTT----------------
T ss_pred HHHHHHcCCCEEEcCC--CCHHHHHHHHHh--CCCEEecCCCHHHHHHHHHCCCCEEEEecCcc----------------
Confidence 9999999999998543 234555555553 46677789999999999999999999852100
Q ss_pred ceecccccCchhHHhhhccCCCcHHHHHHHHhcC-CCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCC---HH
Q 037779 187 DIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGD---PV 262 (310)
Q Consensus 187 ~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~-~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~d---p~ 262 (310)
. ...+.++.++... ++|+ ++.||| +++++.+++++|+++|.+||+|+. +| +.
T Consensus 136 -------------------~-gG~~~lk~l~~~~~~ipv--vaiGGI-~~~n~~~~l~aGa~~vavgSai~~-~d~~~i~ 191 (207)
T 2yw3_A 136 -------------------F-QGVRVLRAYAEVFPEVRF--LPTGGI-KEEHLPHYAALPNLLAVGGSWLLQ-GNLEAVR 191 (207)
T ss_dssp -------------------T-THHHHHHHHHHHCTTCEE--EEBSSC-CGGGHHHHHTCSSBSCEEESGGGS-SCHHHHH
T ss_pred -------------------c-cCHHHHHHHHhhCCCCcE--EEeCCC-CHHHHHHHHhCCCcEEEEehhhhC-CCHHHHH
Confidence 0 0234556666543 7899 467999 499999999999999999999999 78 56
Q ss_pred HHHHHHHHHHH
Q 037779 263 RRARAIVQAVT 273 (310)
Q Consensus 263 ~~~~~~~~~~~ 273 (310)
+.+++|.+.++
T Consensus 192 ~~a~~~~~~~~ 202 (207)
T 2yw3_A 192 AKVRAAKALLS 202 (207)
T ss_dssp HHHHHHHHHC-
T ss_pred HHHHHHHHHhc
Confidence 67777766653
No 29
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=99.58 E-value=8.8e-14 Score=121.46 Aligned_cols=180 Identities=19% Similarity=0.212 Sum_probs=123.6
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHH---hhcCcceEeeccccchHHHHHHHHcCCCeeeec
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIK---SSVTIPVMAKARIGHFVEAQILEAIGVDYVDES 121 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~---~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~~~ 121 (310)
.+.++.+.++|+++|+...+.. ..+.. .+.+++++ ...++|+++++. ++.+.++|+|+|+..
T Consensus 29 ~~~~~~~~~~G~~~i~l~~~~~-~~~~~--------~~~~~~l~~~~~~~~v~v~v~~~------~~~a~~~gad~v~l~ 93 (215)
T 1xi3_A 29 VESVREALEGGATAIQMRIKNA-PTREM--------YEIGKTLRQLTREYDALFFVDDR------VDVALAVDADGVQLG 93 (215)
T ss_dssp HHHHHHHHHTTCSEEEECCCSC-CHHHH--------HHHHHHHHHHHHHTTCEEEEESC------HHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHCCCCEEEECCCCC-CHHHH--------HHHHHHHHHHHHHcCCeEEEcCh------HHHHHHcCCCEEEEC
Confidence 4789999999999984321100 01100 33344443 345678877633 457788999999854
Q ss_pred -CCCChhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHH
Q 037779 122 -EVLTPADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVF 200 (310)
Q Consensus 122 -~~~~~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~ 200 (310)
...++.. .+.+ . .++.+.++++|.+|+..+.+.|+|++.+.+...++.- +.
T Consensus 94 ~~~~~~~~-~~~~--~-~~~~~~v~~~t~~e~~~~~~~g~d~i~~~~~~~~~~~-----------------~~------- 145 (215)
T 1xi3_A 94 PEDMPIEV-AKEI--A-PNLIIGASVYSLEEALEAEKKGADYLGAGSVFPTKTK-----------------ED------- 145 (215)
T ss_dssp TTSCCHHH-HHHH--C-TTSEEEEEESSHHHHHHHHHHTCSEEEEECSSCC---------------------C-------
T ss_pred CccCCHHH-HHHh--C-CCCEEEEecCCHHHHHHHHhcCCCEEEEcCCccCCCC-----------------CC-------
Confidence 2233332 2222 2 4677888899999999888999999998632111100 00
Q ss_pred hhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHc
Q 037779 201 TFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTN 274 (310)
Q Consensus 201 ~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~ 274 (310)
.....++.++.+.+..++|+ +++|||+ ++++.+++++|+++|.+||+|++++||.+.+++|++.++.
T Consensus 146 ----~~~~~~~~l~~l~~~~~~pv--ia~GGI~-~~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~~ 212 (215)
T 1xi3_A 146 ----ARVIGLEGLRKIVESVKIPV--VAIGGIN-KDNAREVLKTGVDGIAVISAVMGAEDVRKATEELRKIVEE 212 (215)
T ss_dssp ----CCCCHHHHHHHHHHHCSSCE--EEESSCC-TTTHHHHHTTTCSEEEESHHHHTSSSHHHHHHHHHHHHHH
T ss_pred ----CCCcCHHHHHHHHHhCCCCE--EEECCcC-HHHHHHHHHcCCCEEEEhHHHhCCCCHHHHHHHHHHHHhh
Confidence 01235677777776567899 5689996 9999999999999999999999999999999999988763
No 30
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=99.57 E-value=8.9e-15 Score=130.24 Aligned_cols=185 Identities=14% Similarity=0.132 Sum_probs=125.8
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCC---CCCCChHHHHHHHhhcCcceEeeccccch-HHHHHHHHcCCCeeee
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGV---ARMSDPQLIKQIKSSVTIPVMAKARIGHF-VEAQILEAIGVDYVDE 120 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~---~~~~~~~~i~~i~~~~~lPv~~kd~i~~~-~~~~~~~~aGad~v~~ 120 (310)
.+.++.+.++|+++++ +. + ..|. ...-.++.++++|+.++.|+.+...+.+. ..++.+.++|||+++.
T Consensus 20 ~~~i~~~~~~Gad~ih-ld-----i--~DG~fvp~~~~g~~~v~~lr~~~~~~~~vhlmv~dp~~~i~~~~~aGadgv~v 91 (230)
T 1tqj_A 20 GEEIKAVDEAGADWIH-VD-----V--MDGRFVPNITIGPLIVDAIRPLTKKTLDVHLMIVEPEKYVEDFAKAGADIISV 91 (230)
T ss_dssp HHHHHHHHHTTCSEEE-EE-----E--EBSSSSSCBCBCHHHHHHHGGGCCSEEEEEEESSSGGGTHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHcCCCEEE-EE-----E--EecCCCcchhhhHHHHHHHHhhcCCcEEEEEEccCHHHHHHHHHHcCCCEEEE
Confidence 4789999999999984 31 1 1111 01112688999999888888776666532 2467889999999974
Q ss_pred cCC----CChhHHHHHHHhcCCCCcEEeec--CCHHHHHHHHHhCCCEEEEecC--CCCCchHHHHHHHHHhhcceeccc
Q 037779 121 SEV----LTPADEENHINKHNFRVPFVCGC--RNLGESLRRIREGAAMIRTKGE--AGTGNIVEAVRHVRSVMGDIRVLR 192 (310)
Q Consensus 121 ~~~----~~~~~~~~~~~~~~~~l~v~~~v--~t~~ea~~a~~~Gad~I~v~g~--~~~~~~~~~~~~~~~~~~~~~~l~ 192 (310)
+.. ..+.+..+.++++ ++.+++.+ +|+.+..+....++|+|.+... .+++.
T Consensus 92 h~e~~~~~~~~~~~~~i~~~--g~~~gv~~~p~t~~e~~~~~~~~~D~v~~msv~pg~ggq------------------- 150 (230)
T 1tqj_A 92 HVEHNASPHLHRTLCQIREL--GKKAGAVLNPSTPLDFLEYVLPVCDLILIMSVNPGFGGQ------------------- 150 (230)
T ss_dssp ECSTTTCTTHHHHHHHHHHT--TCEEEEEECTTCCGGGGTTTGGGCSEEEEESSCC----C-------------------
T ss_pred CcccccchhHHHHHHHHHHc--CCcEEEEEeCCCcHHHHHHHHhcCCEEEEEEeccccCCc-------------------
Confidence 422 2455666666554 45555554 7887777777779999976422 11110
Q ss_pred ccCchhHHhhhccCCCcHHHHHHHHhcC-----CCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHH
Q 037779 193 NMDDDEVFTFAKNIAAPYDLVMQTKQLG-----RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARA 267 (310)
Q Consensus 193 ~~~~d~~~~~~~~~~~~~~l~~~i~~~~-----~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~ 267 (310)
.+ .....+.++++++.. ++|+. +.|||+ .+++.++.++|||++++||+|++++||.+.+++
T Consensus 151 ~~-----------~~~~~~~i~~lr~~~~~~~~~~~I~--v~GGI~-~~~~~~~~~aGad~vvvGSai~~a~d~~~~~~~ 216 (230)
T 1tqj_A 151 SF-----------IPEVLPKIRALRQMCDERGLDPWIE--VDGGLK-PNNTWQVLEAGANAIVAGSAVFNAPNYAEAIAG 216 (230)
T ss_dssp CC-----------CGGGHHHHHHHHHHHHHHTCCCEEE--EESSCC-TTTTHHHHHHTCCEEEESHHHHTSSCHHHHHHH
T ss_pred cC-----------cHHHHHHHHHHHHHHHhcCCCCcEE--EECCcC-HHHHHHHHHcCCCEEEECHHHHCCCCHHHHHHH
Confidence 00 011345555555543 68884 579996 699999999999999999999999999999999
Q ss_pred HHHHH
Q 037779 268 IVQAV 272 (310)
Q Consensus 268 ~~~~~ 272 (310)
|++.+
T Consensus 217 l~~~~ 221 (230)
T 1tqj_A 217 VRNSK 221 (230)
T ss_dssp HHTCC
T ss_pred HHHHH
Confidence 87644
No 31
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=99.57 E-value=1.1e-13 Score=129.26 Aligned_cols=190 Identities=18% Similarity=0.184 Sum_probs=138.2
Q ss_pred CccccCCCHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeecccc---chHHHHHHHHc
Q 037779 37 GVIMDVVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIG---HFVEAQILEAI 113 (310)
Q Consensus 37 g~i~~~~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~---~~~~~~~~~~a 113 (310)
+.|....+++++.++.++|+-++......+.+ .. .+.++++++.++.|+.++.++. ..+.++.+.++
T Consensus 32 apM~gvs~~~la~av~~aGglG~i~~~~~~~~--~l--------~~~i~~i~~~~~~p~gVnl~~~~~~~~~~~~~~~~~ 101 (326)
T 3bo9_A 32 GGMAWAGTPTLAAAVSEAGGLGIIGSGAMKPD--DL--------RKAISELRQKTDKPFGVNIILVSPWADDLVKVCIEE 101 (326)
T ss_dssp CCCTTTSCHHHHHHHHHTTSBEEEECTTCCHH--HH--------HHHHHHHHTTCSSCEEEEEETTSTTHHHHHHHHHHT
T ss_pred CCCCCCCCHHHHHHHHhCCCcEEeCCCCCCHH--HH--------HHHHHHHHHhcCCCEEEEEeccCCCHHHHHHHHHHC
Confidence 45556778999999999998776322111110 00 2456677777778998887662 13566788889
Q ss_pred CCCeeeecCCCChhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccc
Q 037779 114 GVDYVDESEVLTPADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRN 193 (310)
Q Consensus 114 Gad~v~~~~~~~~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~ 193 (310)
|+|.|..+.. .|.++.+.++. .+++++..+++.+++.++.+.|+|+|.+.|...+++.
T Consensus 102 g~d~V~l~~g-~p~~~~~~l~~--~g~~v~~~v~s~~~a~~a~~~GaD~i~v~g~~~GG~~------------------- 159 (326)
T 3bo9_A 102 KVPVVTFGAG-NPTKYIRELKE--NGTKVIPVVASDSLARMVERAGADAVIAEGMESGGHI------------------- 159 (326)
T ss_dssp TCSEEEEESS-CCHHHHHHHHH--TTCEEEEEESSHHHHHHHHHTTCSCEEEECTTSSEEC-------------------
T ss_pred CCCEEEECCC-CcHHHHHHHHH--cCCcEEEEcCCHHHHHHHHHcCCCEEEEECCCCCccC-------------------
Confidence 9999985444 35677777765 4688888999999999999999999999865443320
Q ss_pred cCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHH
Q 037779 194 MDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAV 272 (310)
Q Consensus 194 ~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~ 272 (310)
+...++++++.+.+..++|| |++|||++++++.+++++||++|++||+|+.+++. ...+.+++.+
T Consensus 160 -----------G~~~~~~ll~~i~~~~~iPv--iaaGGI~~~~dv~~al~~GA~gV~vGs~~~~~~e~-~~~~~~k~~~ 224 (326)
T 3bo9_A 160 -----------GEVTTFVLVNKVSRSVNIPV--IAAGGIADGRGMAAAFALGAEAVQMGTRFVASVES-DVHPVYKEKI 224 (326)
T ss_dssp -----------CSSCHHHHHHHHHHHCSSCE--EEESSCCSHHHHHHHHHHTCSEEEESHHHHTBSSC-CSCHHHHHHH
T ss_pred -----------CCccHHHHHHHHHHHcCCCE--EEECCCCCHHHHHHHHHhCCCEEEechHHHcCccc-cccHHHHHHH
Confidence 01235778888877678999 67899999999999999999999999999998763 2334455555
No 32
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=99.56 E-value=9.7e-14 Score=122.41 Aligned_cols=183 Identities=16% Similarity=0.220 Sum_probs=122.4
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCCCC-----CChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeee
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVARM-----SDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVD 119 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~-----~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~ 119 (310)
.+.++.+.++|+++|+ ++ .+.++... .....+++++...++|+++++. ++.+.++|+|+|+
T Consensus 34 ~~~~~~~~~~G~~~i~-l~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~v~v~v~~~------~~~a~~~gad~v~ 99 (227)
T 2tps_A 34 VTVVQKALKGGATLYQ-FR-------EKGGDALTGEARIKFAEKAQAACREAGVPFIVNDD------VELALNLKADGIH 99 (227)
T ss_dssp HHHHHHHHHHTCSEEE-EC-------CCSTTCCCHHHHHHHHHHHHHHHHHHTCCEEEESC------HHHHHHHTCSEEE
T ss_pred HHHHHHHHHCCCCEEE-Ee-------cCCCCHhHHHHHHHHHHHHHHHHHHcCCeEEEcCH------HHHHHHcCCCEEE
Confidence 4679999999999984 42 11111100 0122333444455788888643 3467889999998
Q ss_pred ecCCCChhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhH
Q 037779 120 ESEVLTPADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEV 199 (310)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~ 199 (310)
.... + ..+.+..+..+. +.+.++++|.+|+..+.+.|+|++.+. +.+.+. ...+
T Consensus 100 l~~~-~-~~~~~~~~~~g~-~~~~~s~~t~~e~~~a~~~g~d~v~~~-~v~~t~---------------------~~~~- 153 (227)
T 2tps_A 100 IGQE-D-ANAKEVRAAIGD-MILGVSAHTMSEVKQAEEDGADYVGLG-PIYPTE---------------------TKKD- 153 (227)
T ss_dssp ECTT-S-SCHHHHHHHHTT-SEEEEEECSHHHHHHHHHHTCSEEEEC-CSSCCC---------------------SSSS-
T ss_pred ECCC-c-cCHHHHHHhcCC-cEEEEecCCHHHHHHHHhCCCCEEEEC-CCcCCC---------------------CCCC-
Confidence 4322 1 122222222344 667777899999988999999999873 222110 0000
Q ss_pred HhhhccCCCcHHHHHHHHhcCC-CCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHc
Q 037779 200 FTFAKNIAAPYDLVMQTKQLGR-LPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTN 274 (310)
Q Consensus 200 ~~~~~~~~~~~~l~~~i~~~~~-iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~ 274 (310)
......++.++.+++..+ +|+ ++.|||+ ++++.+++++|+++|.+||+|++++||.+.+++|++.++.
T Consensus 154 ----~~~~~~~~~l~~~~~~~~~~pv--ia~GGI~-~~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~~ 222 (227)
T 2tps_A 154 ----TRAVQGVSLIEAVRRQGISIPI--VGIGGIT-IDNAAPVIQAGADGVSMISAISQAEDPESAARKFREEIQT 222 (227)
T ss_dssp ----CCCCCTTHHHHHHHHTTCCCCE--EEESSCC-TTTSHHHHHTTCSEEEESHHHHTSSCHHHHHHHHHHHHHH
T ss_pred ----CCCccCHHHHHHHHHhCCCCCE--EEEcCCC-HHHHHHHHHcCCCEEEEhHHhhcCCCHHHHHHHHHHHHHh
Confidence 001224677777777666 899 5689996 9999999999999999999999999998999999988764
No 33
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=99.56 E-value=1.4e-13 Score=122.19 Aligned_cols=188 Identities=13% Similarity=0.090 Sum_probs=126.7
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCC---CCCChHHHHHHHhhcCcceEeeccccc-hHHHHHHHHcCCCeeee
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVA---RMSDPQLIKQIKSSVTIPVMAKARIGH-FVEAQILEAIGVDYVDE 120 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~---~~~~~~~i~~i~~~~~lPv~~kd~i~~-~~~~~~~~~aGad~v~~ 120 (310)
.+.++.+.++|+++++.- + ..|.. ..-.++.++++++.++.|+.+..++.+ .+.++.+.++|+|.|..
T Consensus 22 ~~~i~~~~~~Gad~i~l~------i--~Dg~fv~~~~~~~~~~~~lr~~~~~~~~v~lmv~d~~~~i~~~~~agad~v~v 93 (228)
T 1h1y_A 22 AAEADRMVRLGADWLHMD------I--MDGHFVPNLTIGAPVIQSLRKHTKAYLDCHLMVTNPSDYVEPLAKAGASGFTF 93 (228)
T ss_dssp HHHHHHHHHTTCSEEEEE------E--EBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEESSCGGGGHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEEE------E--ecCCcCcchhhCHHHHHHHHhhcCCcEEEEEEecCHHHHHHHHHHcCCCEEEE
Confidence 478999999999998422 1 11110 011278899999888777776666653 23467888899999953
Q ss_pred c--CCCCh-hHHHHHHHhcCCCCcEEeec--CCHHHHHHHHHh---CCCEEEEecC--CCCCchHHHHHHHHHhhcceec
Q 037779 121 S--EVLTP-ADEENHINKHNFRVPFVCGC--RNLGESLRRIRE---GAAMIRTKGE--AGTGNIVEAVRHVRSVMGDIRV 190 (310)
Q Consensus 121 ~--~~~~~-~~~~~~~~~~~~~l~v~~~v--~t~~ea~~a~~~---Gad~I~v~g~--~~~~~~~~~~~~~~~~~~~~~~ 190 (310)
+ ....+ ....+.+++. ++.+++.+ +|..+..+.... ++|++.+... .+++.
T Consensus 94 H~~~~~~~~~~~~~~i~~~--g~~igv~~~p~t~~e~~~~~~~~~~~~d~vl~~sv~pg~~g~----------------- 154 (228)
T 1h1y_A 94 HIEVSRDNWQELIQSIKAK--GMRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQ----------------- 154 (228)
T ss_dssp EGGGCTTTHHHHHHHHHHT--TCEEEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCTTCSSC-----------------
T ss_pred CCCCcccHHHHHHHHHHHc--CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEeecCCCCcc-----------------
Confidence 3 22234 5556666654 45555554 666565555555 9999987422 12111
Q ss_pred ccccCchhHHhhhccCCCcHHHHHHHHhcC-CCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHH
Q 037779 191 LRNMDDDEVFTFAKNIAAPYDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIV 269 (310)
Q Consensus 191 l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~-~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~ 269 (310)
.+. ....+.++++++.. ++|+ ++.|||+ ++++.++.++|+|++++||+|++++||.+.+++|+
T Consensus 155 --~~~-----------~~~l~~i~~~~~~~~~~pi--~v~GGI~-~~ni~~~~~aGaD~vvvGsai~~~~d~~~~~~~l~ 218 (228)
T 1h1y_A 155 --KFM-----------PEMMEKVRALRKKYPSLDI--EVDGGLG-PSTIDVAASAGANCIVAGSSIFGAAEPGEVISALR 218 (228)
T ss_dssp --CCC-----------GGGHHHHHHHHHHCTTSEE--EEESSCS-TTTHHHHHHHTCCEEEESHHHHTSSCHHHHHHHHH
T ss_pred --cCC-----------HHHHHHHHHHHHhcCCCCE--EEECCcC-HHHHHHHHHcCCCEEEECHHHHCCCCHHHHHHHHH
Confidence 000 11345556666654 7888 4579995 79999999999999999999999999999999999
Q ss_pred HHHHcC
Q 037779 270 QAVTNY 275 (310)
Q Consensus 270 ~~~~~~ 275 (310)
+.++..
T Consensus 219 ~~~~~~ 224 (228)
T 1h1y_A 219 KSVEGS 224 (228)
T ss_dssp HHHHHC
T ss_pred HHHHHh
Confidence 887643
No 34
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=99.56 E-value=1.4e-13 Score=121.36 Aligned_cols=179 Identities=18% Similarity=0.183 Sum_probs=119.7
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcC--cceEeeccccchHHHHHHHHcCCCeeeecCC
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVT--IPVMAKARIGHFVEAQILEAIGVDYVDESEV 123 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~--lPv~~kd~i~~~~~~~~~~~aGad~v~~~~~ 123 (310)
+.++.+.++|++++ +++....+...+ .+.++++++... .++++++ .++.+.++|+|.|+.+..
T Consensus 33 ~~~~~~~~~G~~~v-~lr~~~~~~~~~--------~~~~~~l~~~~~~~~~l~v~~------~~~~a~~~gad~v~l~~~ 97 (221)
T 1yad_A 33 ARIIITIQNEVDFI-HIRERSKSAADI--------LKLLDLIFEGGIDKRKLVMNG------RVDIALFSTIHRVQLPSG 97 (221)
T ss_dssp HHHHHHHGGGCSEE-EECCTTSCHHHH--------HHHHHHHHHTTCCGGGEEEES------CHHHHHTTTCCEEEECTT
T ss_pred HHHHHHHHCCCCEE-EEccCCCCHHHH--------HHHHHHHHHhcCcCCeEEEeC------hHHHHHHcCCCEEEeCCC
Confidence 44778888999998 442100001000 344555654321 1344442 446788899999985432
Q ss_pred -CChhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhh
Q 037779 124 -LTPADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTF 202 (310)
Q Consensus 124 -~~~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~ 202 (310)
.+...+ +.+ . .++.+.++++|.+++..+.+.|+|++.+.. .+.+. ...+
T Consensus 98 ~~~~~~~-~~~--~-~~~~ig~sv~t~~~~~~a~~~gaD~i~~~~-~f~~~---------------------~~~g---- 147 (221)
T 1yad_A 98 SFSPKQI-RAR--F-PHLHIGRSVHSLEEAVQAEKEDADYVLFGH-VFETD---------------------CKKG---- 147 (221)
T ss_dssp SCCHHHH-HHH--C-TTCEEEEEECSHHHHHHHHHTTCSEEEEEC-CC--------------------------------
T ss_pred ccCHHHH-HHH--C-CCCEEEEEcCCHHHHHHHHhCCCCEEEECC-ccccC---------------------CCCC----
Confidence 333222 222 2 267888899999999999999999998853 22110 0000
Q ss_pred hccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHc
Q 037779 203 AKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTN 274 (310)
Q Consensus 203 ~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~ 274 (310)
.....++.++.+.+..++|| ++.||| +++++.+++++|+++|.+||+|++++||.+.+++|++.++.
T Consensus 148 --~~~~~~~~l~~~~~~~~~pv--ia~GGI-~~~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~~ 214 (221)
T 1yad_A 148 --LEGRGVSLLSDIKQRISIPV--IAIGGM-TPDRLRDVKQAGADGIAVMSGIFSSAEPLEAARRYSRKLKE 214 (221)
T ss_dssp -----CHHHHHHHHHHHCCSCE--EEESSC-CGGGHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHHHHH
T ss_pred --CCCCCHHHHHHHHHhCCCCE--EEECCC-CHHHHHHHHHcCCCEEEEhHHhhCCCCHHHHHHHHHHHHHH
Confidence 01224677777766567899 567999 79999999999999999999999999999999999988864
No 35
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=99.56 E-value=1.3e-13 Score=119.97 Aligned_cols=171 Identities=17% Similarity=0.195 Sum_probs=125.5
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhc--CcceEeeccccchHHHHHHHHcCCCeeeecCC
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSV--TIPVMAKARIGHFVEAQILEAIGVDYVDESEV 123 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~--~lPv~~kd~i~~~~~~~~~~~aGad~v~~~~~ 123 (310)
++++.+.++|++++... .+.. + ..+.++.+|+.+ ++++.+. .+.+.++++.+.++|||++ ....
T Consensus 26 ~~~~~~~~~G~~~iev~------~~~~-~-----~~~~i~~ir~~~~~~~~ig~~-~v~~~~~~~~a~~~Gad~i-v~~~ 91 (205)
T 1wa3_A 26 EKALAVFEGGVHLIEIT------FTVP-D-----ADTVIKELSFLKEKGAIIGAG-TVTSVEQCRKAVESGAEFI-VSPH 91 (205)
T ss_dssp HHHHHHHHTTCCEEEEE------TTST-T-----HHHHHHHTHHHHHTTCEEEEE-SCCSHHHHHHHHHHTCSEE-ECSS
T ss_pred HHHHHHHHCCCCEEEEe------CCCh-h-----HHHHHHHHHHHCCCCcEEEec-ccCCHHHHHHHHHcCCCEE-EcCC
Confidence 67999999999998432 1110 0 145678888775 3444332 2234567888888999999 4443
Q ss_pred CChhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhh
Q 037779 124 LTPADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFA 203 (310)
Q Consensus 124 ~~~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~ 203 (310)
. +.++.+.+++ .+++++.+++|..|+.++.+.|+|+++++.. .
T Consensus 92 ~-~~~~~~~~~~--~g~~vi~g~~t~~e~~~a~~~Gad~vk~~~~----~------------------------------ 134 (205)
T 1wa3_A 92 L-DEEISQFCKE--KGVFYMPGVMTPTELVKAMKLGHTILKLFPG----E------------------------------ 134 (205)
T ss_dssp C-CHHHHHHHHH--HTCEEECEECSHHHHHHHHHTTCCEEEETTH----H------------------------------
T ss_pred C-CHHHHHHHHH--cCCcEECCcCCHHHHHHHHHcCCCEEEEcCc----c------------------------------
Confidence 3 3566676665 4688899999999999999999999998621 0
Q ss_pred ccCCCcHHHHHHHHhcC-CCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCC---HHHHHHHHHHHHHc
Q 037779 204 KNIAAPYDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGD---PVRRARAIVQAVTN 274 (310)
Q Consensus 204 ~~~~~~~~l~~~i~~~~-~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~d---p~~~~~~~~~~~~~ 274 (310)
....+.++.+.+.. ++|+ ++.|||+ ++++.+++++|+++|.+||+|++ +| |.+.+++|.+.++.
T Consensus 135 ---~~g~~~~~~l~~~~~~~pv--ia~GGI~-~~~~~~~~~~Ga~~v~vGs~i~~-~d~~~~~~~~~~~~~~~~~ 202 (205)
T 1wa3_A 135 ---VVGPQFVKAMKGPFPNVKF--VPTGGVN-LDNVCEWFKAGVLAVGVGSALVK-GTPDEVREKAKAFVEKIRG 202 (205)
T ss_dssp ---HHHHHHHHHHHTTCTTCEE--EEBSSCC-TTTHHHHHHHTCSCEEECHHHHC-SCHHHHHHHHHHHHHHHHH
T ss_pred ---ccCHHHHHHHHHhCCCCcE--EEcCCCC-HHHHHHHHHCCCCEEEECccccC-CCHHHHHHHHHHHHHHHHh
Confidence 00134455565544 6888 6789995 89999999999999999999999 89 99999999988764
No 36
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.55 E-value=2.2e-14 Score=125.90 Aligned_cols=176 Identities=10% Similarity=0.117 Sum_probs=119.5
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeeee-cCC
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVDE-SEV 123 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~~-~~~ 123 (310)
.+.++.+.++|+++| +++....+.... .+.++++++..+.++++++.. +.+.++|+|+|+. ...
T Consensus 16 ~~~~~~a~~~Gv~~v-~lr~k~~~~~~~--------~~~i~~l~~~~~~~livnd~~------~~A~~~gadgvhl~~~~ 80 (210)
T 3ceu_A 16 DKIITALFEEGLDIL-HLRKPETPAMYS--------ERLLTLIPEKYHRRIVTHEHF------YLKEEFNLMGIHLNARN 80 (210)
T ss_dssp HHHHHHHHHTTCCEE-EECCSSCCHHHH--------HHHHHHSCGGGGGGEEESSCT------THHHHTTCSEEECCSSS
T ss_pred HHHHHHHHHCCCCEE-EEccCCCCHHHH--------HHHHHHHHHHhCCeEEEeCCH------HHHHHcCCCEEEECccc
Confidence 477899999999998 452100001111 334566666678888887554 4678899999983 222
Q ss_pred CChhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhh
Q 037779 124 LTPADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFA 203 (310)
Q Consensus 124 ~~~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~ 203 (310)
.+... ..+..++++++|.+|+..+. .|+||+.+. +.+... ++.+
T Consensus 81 ~~~~~--------~~~~~ig~s~~t~~e~~~A~-~GaDyv~~g-~vf~t~---------------------sk~~----- 124 (210)
T 3ceu_A 81 PSEPH--------DYAGHVSCSCHSVEEVKNRK-HFYDYVFMS-PIYDSI---------------------SKVN----- 124 (210)
T ss_dssp CSCCT--------TCCSEEEEEECSHHHHHTTG-GGSSEEEEC-CCC---------------------------------
T ss_pred ccccc--------ccCCEEEEecCCHHHHHHHh-hCCCEEEEC-CcCCCC---------------------CCCC-----
Confidence 22111 12578999999999999888 999999984 333110 0000
Q ss_pred ccCCCcHHHHHHHHhc--CCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHcC
Q 037779 204 KNIAAPYDLVMQTKQL--GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTNY 275 (310)
Q Consensus 204 ~~~~~~~~l~~~i~~~--~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~~ 275 (310)
......++.++.+.+. .++||+ +.|||+ ++++.+++++|++||.|+|+|++++||.+. ++|++.++.+
T Consensus 125 ~~~~~g~~~l~~~~~~~~~~iPvi--aiGGI~-~~nv~~~~~~Ga~gVav~s~i~~~~d~~~~-~~~~~~v~~~ 194 (210)
T 3ceu_A 125 YYSTYTAEELREAQKAKIIDSKVM--ALGGIN-EDNLLEIKDFGFGGAVVLGDLWNKFDACLD-QNYLAVIEHF 194 (210)
T ss_dssp --CCCCHHHHHHHHHTTCSSTTEE--EESSCC-TTTHHHHHHTTCSEEEESHHHHTTCCTTTS-SCCHHHHHHH
T ss_pred CCCCCCHHHHHHHHHhcCCCCCEE--EECCCC-HHHHHHHHHhCCCEEEEhHHhHcCCCHHHH-HHHHHHHHHH
Confidence 0012246777777765 579994 569995 999999999999999999999999999765 6666666544
No 37
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=99.55 E-value=4.1e-14 Score=128.21 Aligned_cols=212 Identities=13% Similarity=0.118 Sum_probs=134.8
Q ss_pred ccceeeecCCcccc------------CCCH-HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcc
Q 037779 28 VGLAQMLRGGVIMD------------VVTP-EQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIP 94 (310)
Q Consensus 28 ~~~~~~l~~g~i~~------------~~~~-~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lP 94 (310)
.+.++++.+|.... ..+| ++|+.|.+.|+++++.+ |... .+.+.++++++.+.+|
T Consensus 11 ~G~~V~~~~G~~~~~~~~~~~~~~~~~~dp~~~A~~~~~~Ga~~l~vv-----DL~~-------~n~~~i~~i~~~~~~p 78 (260)
T 2agk_A 11 NGEVKQIVGGTLTSKKEDVPKTNFVSQHPSSYYAKLYKDRDVQGCHVI-----KLGP-------NNDDAAREALQESPQF 78 (260)
T ss_dssp TTEECC--------------------CCCHHHHHHHHHHTTCTTCEEE-----EESS-------SCHHHHHHHHHHSTTT
T ss_pred CCEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCCEEEEE-----eCCC-------CCHHHHHHHHhcCCce
Confidence 45666776665432 2355 89999999999998554 2221 3488999999999999
Q ss_pred eEeeccccchHHHHHHHHcCCCeee-ecCCC-C-----hhHHHHHHHhcC-CCCcEEeecCCHHHHHHHHHhCCCEEEEe
Q 037779 95 VMAKARIGHFVEAQILEAIGVDYVD-ESEVL-T-----PADEENHINKHN-FRVPFVCGCRNLGESLRRIREGAAMIRTK 166 (310)
Q Consensus 95 v~~kd~i~~~~~~~~~~~aGad~v~-~~~~~-~-----~~~~~~~~~~~~-~~l~v~~~v~t~~ea~~a~~~Gad~I~v~ 166 (310)
+++...+... .++.+. +||+.|. .+..+ + |+.+.+.+++.+ -.+.+.++++.. +.+.-.+.++
T Consensus 79 v~vgGGir~~-~~~~~l-~Ga~~Viigs~a~~~~g~~~p~~~~~~~~~~g~~~ivv~iD~k~~-------~~~g~~V~~~ 149 (260)
T 2agk_A 79 LQVGGGINDT-NCLEWL-KWASKVIVTSWLFTKEGHFQLKRLERLTELCGKDRIVVDLSCRKT-------QDGRWIVAMN 149 (260)
T ss_dssp SEEESSCCTT-THHHHT-TTCSCEEECGGGBCTTCCBCHHHHHHHHHHHCGGGEEEEEEEEEE-------ETTEEEEEET
T ss_pred EEEeCCCCHH-HHHHHh-cCCCEEEECcHHHhhcCCCCHHHHHHHHHHhCcCcEEEEEEeeec-------CCCceEEEEc
Confidence 9997777654 777777 9999987 44433 3 444444444433 224555555421 0001144555
Q ss_pred cCCC-CC-chH-HHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcC----CCCEEEEccCCCCCHHHHH
Q 037779 167 GEAG-TG-NIV-EAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLG----RLPVVHFAAGGVATPADAA 239 (310)
Q Consensus 167 g~~~-~~-~~~-~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~----~iPVv~ia~GGI~t~~di~ 239 (310)
|+.. ++ +.. +.++.+.+. .+...+..+++|+.. .+.++++++.+.+.. ++|| |++|||+|++|+.
T Consensus 150 gw~~~t~~~~~~e~a~~~~~~-a~~il~t~i~~dG~~-----~G~d~eli~~l~~~~~~~~~iPV--IasGGi~s~ed~~ 221 (260)
T 2agk_A 150 KWQTLTDLELNADTFRELRKY-TNEFLIHAADVEGLC-----GGIDELLVSKLFEWTKDYDDLKI--VYAGGAKSVDDLK 221 (260)
T ss_dssp TTTEEEEEEESHHHHHHHTTT-CSEEEEEC------------CCCCHHHHHHHHHHHTTCSSCEE--EEESCCCCTHHHH
T ss_pred CCccccCccHHHHHHHHHHHh-cCEEEEEeeccccCc-----CCCCHHHHHHHHHhhcccCCceE--EEeCCCCCHHHHH
Confidence 5532 11 334 666666667 665556666666542 356899999999887 8999 7899999999999
Q ss_pred HHHHc--CCCEEEEcccc--ccCC-CHHHHHHHH
Q 037779 240 MMMQL--GCDGVFVGSGV--FKSG-DPVRRARAI 268 (310)
Q Consensus 240 ~~~~~--GadgV~VGsai--~~~~-dp~~~~~~~ 268 (310)
++++. |+++|++||++ +..+ .....+.++
T Consensus 222 ~l~~~~~G~~gvivg~al~l~~g~~~~~~~~~~~ 255 (260)
T 2agk_A 222 LVDELSHGKVDLTFGSSLDIFGGNLVKFEDCCRW 255 (260)
T ss_dssp HHHHHHTTCEEEECCTTBGGGTCSSBCHHHHHHH
T ss_pred HHHHhcCCCCEEEeeCCHHHcCCCCCCHHHHHHH
Confidence 99987 99999999997 8776 555555444
No 38
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=99.55 E-value=1.7e-13 Score=119.71 Aligned_cols=182 Identities=23% Similarity=0.210 Sum_probs=126.0
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhh-cCcceEeeccccc-hH-HHHHHHHcCCCeeeecC
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSS-VTIPVMAKARIGH-FV-EAQILEAIGVDYVDESE 122 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~-~~lPv~~kd~i~~-~~-~~~~~~~aGad~v~~~~ 122 (310)
+.++.+. .|++.+.+.. |.- -.++ ++.++++|+. .++|+.++-.+.+ .+ .++.+.++|||+++.+.
T Consensus 17 ~~~~~~~-~~~diie~G~--p~~-~~~g-------~~~i~~ir~~~~~~~i~~~~~~~~~~~~~~~~~~~~Gad~v~v~~ 85 (211)
T 3f4w_A 17 VFMDKVV-DDVDIIEVGT--PFL-IREG-------VNAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGADYVTVLG 85 (211)
T ss_dssp HHHHHHG-GGCSEEEECH--HHH-HHHT-------THHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEET
T ss_pred HHHHHhh-cCccEEEeCc--HHH-Hhcc-------HHHHHHHHHhCCCCEEEEEEEeccchHHHHHHHHhcCCCEEEEeC
Confidence 4566664 5888875431 110 1222 6889999988 5899977544432 12 37888999999998654
Q ss_pred CCC---hhHHHHHHHhcCCCCcEEee---cCCH-HHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccC
Q 037779 123 VLT---PADEENHINKHNFRVPFVCG---CRNL-GESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMD 195 (310)
Q Consensus 123 ~~~---~~~~~~~~~~~~~~l~v~~~---v~t~-~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 195 (310)
... +.++.+.++++ ++.++++ +.|+ ++++.+.+.|+|+|.++ +.+++. ..
T Consensus 86 ~~~~~~~~~~~~~~~~~--g~~~~v~~~~~~t~~~~~~~~~~~g~d~i~v~-~g~~g~-------------------~~- 142 (211)
T 3f4w_A 86 VTDVLTIQSCIRAAKEA--GKQVVVDMICVDDLPARVRLLEEAGADMLAVH-TGTDQQ-------------------AA- 142 (211)
T ss_dssp TSCHHHHHHHHHHHHHH--TCEEEEECTTCSSHHHHHHHHHHHTCCEEEEE-CCHHHH-------------------HT-
T ss_pred CCChhHHHHHHHHHHHc--CCeEEEEecCCCCHHHHHHHHHHcCCCEEEEc-CCCccc-------------------cc-
Confidence 322 24555555554 4555544 3454 45788889999999886 222211 00
Q ss_pred chhHHhhhccCCCcHHHHHHHHhc-CCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHc
Q 037779 196 DDEVFTFAKNIAAPYDLVMQTKQL-GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTN 274 (310)
Q Consensus 196 ~d~~~~~~~~~~~~~~l~~~i~~~-~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~ 274 (310)
.....+.++.+++. .++|+ +++|||+ ++++.+++++|||+|++||+|++++||.+.+++|++.+++
T Consensus 143 ----------~~~~~~~i~~l~~~~~~~~i--~~~gGI~-~~~~~~~~~~Gad~vvvGsai~~~~d~~~~~~~l~~~~~~ 209 (211)
T 3f4w_A 143 ----------GRKPIDDLITMLKVRRKARI--AVAGGIS-SQTVKDYALLGPDVVIVGSAITHAADPAGEARKISQVLLQ 209 (211)
T ss_dssp ----------TCCSHHHHHHHHHHCSSCEE--EEESSCC-TTTHHHHHTTCCSEEEECHHHHTCSSHHHHHHHHHHHHHH
T ss_pred ----------CCCCHHHHHHHHHHcCCCcE--EEECCCC-HHHHHHHHHcCCCEEEECHHHcCCCCHHHHHHHHHHHHhh
Confidence 01245667777775 37888 5689995 9999999999999999999999999999999999998875
No 39
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=99.54 E-value=1.1e-13 Score=121.64 Aligned_cols=186 Identities=12% Similarity=0.073 Sum_probs=124.9
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCC---CCCChHHHHHHHhhcCcceEeeccccch-HHHHHHHHcCCCeeee
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVA---RMSDPQLIKQIKSSVTIPVMAKARIGHF-VEAQILEAIGVDYVDE 120 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~---~~~~~~~i~~i~~~~~lPv~~kd~i~~~-~~~~~~~~aGad~v~~ 120 (310)
.+.++.+.++|+++++.. .+.|+. ....++.++++++.++.|+.+..++.+. +.++.+.++|+|+|+.
T Consensus 19 ~~~~~~~~~~G~~~i~~~--------~~dg~~~~~~~~g~~~i~~i~~~~~~~~~v~l~v~d~~~~i~~~~~~gad~v~v 90 (220)
T 2fli_A 19 ASELARIEETDAEYVHID--------IMDGQFVPNISFGADVVASMRKHSKLVFDCHLMVVDPERYVEAFAQAGADIMTI 90 (220)
T ss_dssp HHHHHHHHHTTCCEEEEE--------EEBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEESSSGGGGHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEEE--------eecCCCCCccccCHHHHHHHHHhCCCCEEEEEeecCHHHHHHHHHHcCCCEEEE
Confidence 478999999999997421 122221 1122789999998888888887776542 3568889999999963
Q ss_pred c--CCCChhHHHHHHHhcCCCCcEEeec--CCHHHHHHHHHhCCCEEEEe--cCCCCCchHHHHHHHHHhhcceeccccc
Q 037779 121 S--EVLTPADEENHINKHNFRVPFVCGC--RNLGESLRRIREGAAMIRTK--GEAGTGNIVEAVRHVRSVMGDIRVLRNM 194 (310)
Q Consensus 121 ~--~~~~~~~~~~~~~~~~~~l~v~~~v--~t~~ea~~a~~~Gad~I~v~--g~~~~~~~~~~~~~~~~~~~~~~~l~~~ 194 (310)
+ ....+....+.+++. +..+++.+ +|..|..+....++|++.+. ++.+++. ..
T Consensus 91 h~~~~~~~~~~~~~~~~~--g~~i~~~~~~~t~~e~~~~~~~~~d~vl~~~~~~g~~g~-------------------~~ 149 (220)
T 2fli_A 91 HTESTRHIHGALQKIKAA--GMKAGVVINPGTPATALEPLLDLVDQVLIMTVNPGFGGQ-------------------AF 149 (220)
T ss_dssp EGGGCSCHHHHHHHHHHT--TSEEEEEECTTSCGGGGGGGTTTCSEEEEESSCTTCSSC-------------------CC
T ss_pred ccCccccHHHHHHHHHHc--CCcEEEEEcCCCCHHHHHHHHhhCCEEEEEEECCCCccc-------------------cc
Confidence 3 223455666666654 44455554 66666655666678988542 2333331 00
Q ss_pred CchhHHhhhccCCCcHHHHHHHHhcC-----CCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHH
Q 037779 195 DDDEVFTFAKNIAAPYDLVMQTKQLG-----RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIV 269 (310)
Q Consensus 195 ~~d~~~~~~~~~~~~~~l~~~i~~~~-----~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~ 269 (310)
. ....+.++.+++.. ++|+ ++.|||+ ++++.++.++|+|+++|||+|++++||.+.+++|+
T Consensus 150 ~-----------~~~~~~i~~~~~~~~~~~~~~~i--~v~GGI~-~~~~~~~~~~Gad~vvvGsai~~~~d~~~a~~~~~ 215 (220)
T 2fli_A 150 I-----------PECLEKVATVAKWRDEKGLSFDI--EVDGGVD-NKTIRACYEAGANVFVAGSYLFKASDLVSQVQTLR 215 (220)
T ss_dssp C-----------GGGHHHHHHHHHHHHHTTCCCEE--EEESSCC-TTTHHHHHHHTCCEEEESHHHHTSSCHHHHHHHHH
T ss_pred C-----------HHHHHHHHHHHHHHHhcCCCceE--EEECcCC-HHHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHH
Confidence 1 01123333333321 5787 5689996 99999999999999999999999999999999998
Q ss_pred HHHH
Q 037779 270 QAVT 273 (310)
Q Consensus 270 ~~~~ 273 (310)
+.++
T Consensus 216 ~~~~ 219 (220)
T 2fli_A 216 TALN 219 (220)
T ss_dssp HHHC
T ss_pred HHhc
Confidence 7653
No 40
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=99.52 E-value=5.1e-13 Score=125.03 Aligned_cols=192 Identities=20% Similarity=0.222 Sum_probs=137.0
Q ss_pred CccccCCCHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeecccc--c-hHHHHHHHHc
Q 037779 37 GVIMDVVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIG--H-FVEAQILEAI 113 (310)
Q Consensus 37 g~i~~~~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~--~-~~~~~~~~~a 113 (310)
+.|....+++++..+.++|+-++......+.+ .. .+.++++++.++.|+.++.+.. . .+.++.+.++
T Consensus 18 apM~g~s~~~la~av~~aG~lG~i~~~~~~~~--~~--------~~~i~~i~~~~~~p~gvnl~~~~~~~~~~~~~a~~~ 87 (332)
T 2z6i_A 18 GGMAWVADGDLAGAVSKAGGLGIIGGGNAPKE--VV--------KANIDKIKSLTDKPFGVNIMLLSPFVEDIVDLVIEE 87 (332)
T ss_dssp CCCTTTCCHHHHHHHHHHTSBEEEECTTCCHH--HH--------HHHHHHHHHHCCSCEEEEECTTSTTHHHHHHHHHHT
T ss_pred CCCCCCCcHHHHHHHHhCCCcEEeCCCCCCHH--HH--------HHHHHHHHHhcCCCEEEEecCCCCCHHHHHHHHHHC
Confidence 34445667999999999998665332111110 00 3346667777788998887762 2 2456788889
Q ss_pred CCCeeeecCCCChhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccc
Q 037779 114 GVDYVDESEVLTPADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRN 193 (310)
Q Consensus 114 Gad~v~~~~~~~~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~ 193 (310)
|+|.|..+.. .|.++.+.+++. ++++++.+.+.++++.+.+.|+|++.+.|...+++.
T Consensus 88 g~d~V~~~~g-~p~~~i~~l~~~--g~~v~~~v~~~~~a~~~~~~GaD~i~v~g~~~GG~~------------------- 145 (332)
T 2z6i_A 88 GVKVVTTGAG-NPSKYMERFHEA--GIIVIPVVPSVALAKRMEKIGADAVIAEGMEAGGHI------------------- 145 (332)
T ss_dssp TCSEEEECSS-CGGGTHHHHHHT--TCEEEEEESSHHHHHHHHHTTCSCEEEECTTSSEEC-------------------
T ss_pred CCCEEEECCC-ChHHHHHHHHHc--CCeEEEEeCCHHHHHHHHHcCCCEEEEECCCCCCCC-------------------
Confidence 9999986544 466777777763 688888999999999999999999999765322210
Q ss_pred cCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHH
Q 037779 194 MDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVT 273 (310)
Q Consensus 194 ~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~ 273 (310)
+...++++++.+++..++|| |++|||++++++.+++++|||+|.+||+|+.+++. ...+.+++.+.
T Consensus 146 -----------g~~~~~~ll~~i~~~~~iPV--iaaGGI~~~~~~~~al~~GAdgV~vGs~~l~~~e~-~~~~~~k~~~~ 211 (332)
T 2z6i_A 146 -----------GKLTTMTLVRQVATAISIPV--IAAGGIADGEGAAAGFMLGAEAVQVGTRFVVAKES-NAHPNYKEKIL 211 (332)
T ss_dssp -----------CSSCHHHHHHHHHHHCSSCE--EEESSCCSHHHHHHHHHTTCSEEEECHHHHTBTTC-CSCHHHHHHHH
T ss_pred -----------CCccHHHHHHHHHHhcCCCE--EEECCCCCHHHHHHHHHcCCCEEEecHHHhcCccc-cccHHHHHHHH
Confidence 11235778888887778999 67899999999999999999999999999997643 12344445544
Q ss_pred c
Q 037779 274 N 274 (310)
Q Consensus 274 ~ 274 (310)
.
T Consensus 212 ~ 212 (332)
T 2z6i_A 212 K 212 (332)
T ss_dssp H
T ss_pred h
Confidence 3
No 41
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=99.52 E-value=3.6e-14 Score=125.44 Aligned_cols=163 Identities=21% Similarity=0.274 Sum_probs=113.2
Q ss_pred hHHHHHHHhhcCcceEeeccccc-------hHHHHHHHHcCCCeeeecC---CCChhHHHHHHHh-cCCCCcEEeecCCH
Q 037779 81 PQLIKQIKSSVTIPVMAKARIGH-------FVEAQILEAIGVDYVDESE---VLTPADEENHINK-HNFRVPFVCGCRNL 149 (310)
Q Consensus 81 ~~~i~~i~~~~~lPv~~kd~i~~-------~~~~~~~~~aGad~v~~~~---~~~~~~~~~~~~~-~~~~l~v~~~v~t~ 149 (310)
+..++.+++.+++|++++|.--. ...++.+.++|||+|+..+ .++..++.+.+.. +..|+.+++++++.
T Consensus 42 ~~~l~~v~~~~~~~v~aqd~~~~~~ga~tGei~~~~~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~~Gl~~iv~v~~~ 121 (219)
T 2h6r_A 42 FVDLRMIVENVNIPVYAQHIDNINPGSHTGHILAEAIKDCGCKGTLINHSEKRMLLADIEAVINKCKNLGLETIVCTNNI 121 (219)
T ss_dssp TTTHHHHHHHCCSCBEESCCCSCCSBSCTTCCCHHHHHHHTCCEEEESBTTBCCBHHHHHHHHHHHHHHTCEEEEEESSS
T ss_pred HHHHHHHHHHcCCcEEEEECChhhcCCccCchHHHHHHHcCCCEEEECCccccCCHHHHHHHHHHHHHCCCeEEEEeCCc
Confidence 67788888888999999873210 0127789999999998433 3455555555444 34589999999999
Q ss_pred HHHHHHHHhCCCEEEEecCC--CCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcC-CCCEEE
Q 037779 150 GESLRRIREGAAMIRTKGEA--GTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLG-RLPVVH 226 (310)
Q Consensus 150 ~ea~~a~~~Gad~I~v~g~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~-~iPVv~ 226 (310)
.+.+++.+.++++++++... +||. .+.+.++| ...+..+.+++.. ++|+
T Consensus 122 ~e~~~~~~~~~~~i~~~~~~~iGtG~----------------~~~t~~~~----------~~~~~~~~ir~~~~~~~i-- 173 (219)
T 2h6r_A 122 NTSKAVAALSPDCIAVEPPELIGTGI----------------PVSKANPE----------VVEGTVRAVKEINKDVKV-- 173 (219)
T ss_dssp HHHHHHTTTCCSEEEECCCC----------------------------------------CSHHHHHHHHHHCTTCEE--
T ss_pred hHHHHHHhCCCCEEEEEeccccccCC----------------CCccCCHH----------HHHHHHHHHHhccCCCeE--
Confidence 89888888899999987432 2220 00011111 0123333344432 5788
Q ss_pred EccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHH
Q 037779 227 FAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQA 271 (310)
Q Consensus 227 ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~ 271 (310)
+++|||++++++..+.+.|+|||+|||++++++||.+.+++|++.
T Consensus 174 i~ggGI~~~~~~~~~~~~gaDgvlVGsAi~~~~d~~~~~~~l~~~ 218 (219)
T 2h6r_A 174 LCGAGISKGEDVKAALDLGAEGVLLASGVVKAKNVEEAIRELIKF 218 (219)
T ss_dssp EECSSCCSHHHHHHHHTTTCCCEEESHHHHTCSSHHHHHHHHCC-
T ss_pred EEEeCcCcHHHHHHHhhCCCCEEEEcHHHhCcccHHHHHHHHHHh
Confidence 679999999999999999999999999999999999998887653
No 42
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=99.51 E-value=9.2e-13 Score=122.98 Aligned_cols=195 Identities=18% Similarity=0.233 Sum_probs=137.2
Q ss_pred CccccCCCHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeecccc------c-hHHHHH
Q 037779 37 GVIMDVVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIG------H-FVEAQI 109 (310)
Q Consensus 37 g~i~~~~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~------~-~~~~~~ 109 (310)
+.|....+++++.++.++|+-++......+ ..+.. .+.++++++.++.|+.++.++. . .+.++.
T Consensus 21 apM~gvs~~~la~av~~aGglG~i~~~~~~-s~~~l--------~~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~~~~~~ 91 (328)
T 2gjl_A 21 GGMQWVGRAEMAAAVANAGGLATLSALTQP-SPEAL--------AAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAA 91 (328)
T ss_dssp CCCTTTCSHHHHHHHHHTTSBCEEETTTSS-SHHHH--------HHHHHHHHHHCSSCCEEEEEECCCSSCCCHHHHHHH
T ss_pred CCCCCCCcHHHHHHHHHCCCeEEeCCCCCC-CHHHH--------HHHHHHHHHhcCCCeEEEEeccccccCccHHHHHHH
Confidence 444556789999999999986653221000 01110 2446677777778887776654 1 256788
Q ss_pred HHHcCCCeeeecCCCChhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhccee
Q 037779 110 LEAIGVDYVDESEVLTPADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIR 189 (310)
Q Consensus 110 ~~~aGad~v~~~~~~~~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~ 189 (310)
+.++|+|.|..+.. .|.++.+.+++. +++++..+++.+++.++.+.|+|++.+.|...+++.
T Consensus 92 ~~~~g~d~V~~~~g-~p~~~~~~l~~~--gi~vi~~v~t~~~a~~~~~~GaD~i~v~g~~~GG~~--------------- 153 (328)
T 2gjl_A 92 IIEAGIRVVETAGN-DPGEHIAEFRRH--GVKVIHKCTAVRHALKAERLGVDAVSIDGFECAGHP--------------- 153 (328)
T ss_dssp HHHTTCCEEEEEES-CCHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTCSEEEEECTTCSBCC---------------
T ss_pred HHhcCCCEEEEcCC-CcHHHHHHHHHc--CCCEEeeCCCHHHHHHHHHcCCCEEEEECCCCCcCC---------------
Confidence 88899999985433 246777777664 688888899999999999999999998765433320
Q ss_pred cccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHH
Q 037779 190 VLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIV 269 (310)
Q Consensus 190 ~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~ 269 (310)
.. ....++++++.+++..++|| +++|||++++++.+++++|||+|++||+|+.+++. ...+.++
T Consensus 154 --G~-----------~~~~~~~~l~~v~~~~~iPv--iaaGGI~~~~~v~~al~~GAdgV~vGs~~~~~~e~-~~~~~~k 217 (328)
T 2gjl_A 154 --GE-----------DDIPGLVLLPAAANRLRVPI--IASGGFADGRGLVAALALGADAINMGTRFLATREC-PIHPAVK 217 (328)
T ss_dssp --CS-----------SCCCHHHHHHHHHTTCCSCE--EEESSCCSHHHHHHHHHHTCSEEEESHHHHTSSSS-CSCHHHH
T ss_pred --CC-----------ccccHHHHHHHHHHhcCCCE--EEECCCCCHHHHHHHHHcCCCEEEECHHHHcCccc-cccHHHH
Confidence 00 00236788888887778999 67899999999999999999999999999998763 2334455
Q ss_pred HHHHc
Q 037779 270 QAVTN 274 (310)
Q Consensus 270 ~~~~~ 274 (310)
+.+.+
T Consensus 218 ~~~~~ 222 (328)
T 2gjl_A 218 AAIRA 222 (328)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 55433
No 43
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=99.50 E-value=2.3e-13 Score=120.64 Aligned_cols=188 Identities=15% Similarity=0.154 Sum_probs=122.7
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccch-HHHHHHHHcCCCeeeecCC
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHF-VEAQILEAIGVDYVDESEV 123 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~-~~~~~~~~aGad~v~~~~~ 123 (310)
.+.++.+.++|+++++.-- .|....... ...++.++++++.++.|+.+..++.+. +.++.+.++|+|+++.+..
T Consensus 26 ~~~i~~~~~~G~d~i~l~~---~dg~f~~~~--~~~~~~i~~l~~~~~~~~~v~l~vnd~~~~v~~~~~~Gad~v~vh~~ 100 (230)
T 1rpx_A 26 GEQVKAIEQAGCDWIHVDV---MDGRFVPNI--TIGPLVVDSLRPITDLPLDVHLMIVEPDQRVPDFIKAGADIVSVHCE 100 (230)
T ss_dssp HHHHHHHHHTTCCCEEEEE---EBSSSSSCB--CCCHHHHHHHGGGCCSCEEEEEESSSHHHHHHHHHHTTCSEEEEECS
T ss_pred HHHHHHHHHCCCCEEEEee---ccCCccccc--ccCHHHHHHHHhccCCcEEEEEEecCHHHHHHHHHHcCCCEEEEEec
Confidence 4778999999999984310 011000000 112788999998888888777666643 3677888899999974432
Q ss_pred ----CChhHHHHHHHhcCCCCcEEeec--CCHHHHHHHHHhCCCEEEEec--CCCCCchHHHHHHHHHhhcceecccccC
Q 037779 124 ----LTPADEENHINKHNFRVPFVCGC--RNLGESLRRIREGAAMIRTKG--EAGTGNIVEAVRHVRSVMGDIRVLRNMD 195 (310)
Q Consensus 124 ----~~~~~~~~~~~~~~~~l~v~~~v--~t~~ea~~a~~~Gad~I~v~g--~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 195 (310)
..+.++.+.++++ ++.+++.+ +|..+...+...++|++.+.+ +.+++. ++.
T Consensus 101 ~~~~~~~~~~~~~~~~~--g~~ig~~~~p~t~~e~~~~~~~~~d~vl~~~~~pg~~g~-------------------~~~ 159 (230)
T 1rpx_A 101 QSSTIHLHRTINQIKSL--GAKAGVVLNPGTPLTAIEYVLDAVDLVLIMSVNPGFGGQ-------------------SFI 159 (230)
T ss_dssp TTTCSCHHHHHHHHHHT--TSEEEEEECTTCCGGGGTTTTTTCSEEEEESSCTTCSSC-------------------CCC
T ss_pred CccchhHHHHHHHHHHc--CCcEEEEeCCCCCHHHHHHHHhhCCEEEEEEEcCCCCCc-------------------ccc
Confidence 2344566666554 45555554 566666556667899984432 233321 000
Q ss_pred chhHHhhhccCCCcHHHHHHHHhcC-----CCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHH
Q 037779 196 DDEVFTFAKNIAAPYDLVMQTKQLG-----RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQ 270 (310)
Q Consensus 196 ~d~~~~~~~~~~~~~~l~~~i~~~~-----~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~ 270 (310)
....+.++.+++.. ++|+ ++.|||+ ++++.+++++|||+|+|||+|++++||.+.+++|++
T Consensus 160 -----------~~~~~~i~~l~~~~~~~~~~~pi--~v~GGI~-~~n~~~~~~aGad~vvvgSaI~~a~dp~~a~~~l~~ 225 (230)
T 1rpx_A 160 -----------ESQVKKISDLRKICAERGLNPWI--EVDGGVG-PKNAYKVIEAGANALVAGSAVFGAPDYAEAIKGIKT 225 (230)
T ss_dssp -----------TTHHHHHHHHHHHHHHHTCCCEE--EEESSCC-TTTHHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHT
T ss_pred -----------HHHHHHHHHHHHHHHhcCCCceE--EEECCCC-HHHHHHHHHcCCCEEEEChhhhCCCCHHHHHHHHHH
Confidence 11233344444432 6788 4579995 999999999999999999999999999999998875
Q ss_pred HH
Q 037779 271 AV 272 (310)
Q Consensus 271 ~~ 272 (310)
.+
T Consensus 226 ~~ 227 (230)
T 1rpx_A 226 SK 227 (230)
T ss_dssp CC
T ss_pred HH
Confidence 43
No 44
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=99.50 E-value=1.7e-12 Score=115.83 Aligned_cols=194 Identities=19% Similarity=0.255 Sum_probs=126.7
Q ss_pred HHHHHHHHcCCcEEE-ecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeecccc-chH----HHHHHHH-c-CCCe
Q 037779 46 EQARIAEEAGACAVM-ALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIG-HFV----EAQILEA-I-GVDY 117 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~-~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~-~~~----~~~~~~~-a-Gad~ 117 (310)
.+.+++...|+..+. -+++++...... ....+..+. ..++.++-+.-.. +.+ .++..-+ + |-+.
T Consensus 34 ~~~~a~~asg~e~vtva~rR~~~~~~~~-------~~~~~~~i~-~~~~~~lpNTag~~ta~eAv~~a~lare~~~~~~~ 105 (265)
T 1wv2_A 34 ETRRAIEASGAEIVTVAVRRTNIGQNPD-------EPNLLDVIP-PDRYTILPNTAGCYDAVEAVRTCRLARELLDGHNL 105 (265)
T ss_dssp HHHHHHHHSCCSEEEEEGGGCCC--------------------C-TTTSEEEEECTTCCSHHHHHHHHHHHHTTTTSCCE
T ss_pred HHHHHHHHhCCCeEEEEEEeeccccCCC-------cchHHhhhh-hcCCEECCcCCCCCCHHHHHHHHHHHHHHcCCCCe
Confidence 567778888998772 343433210000 122333343 3455666654333 222 2344444 3 5555
Q ss_pred ee---ecC--C--CChhHHHHHHHh-cCCCCcEE-eecCCHHHHHHHHHhCCCEEEEecC-CCCCchHHHHHHHHHhhcc
Q 037779 118 VD---ESE--V--LTPADEENHINK-HNFRVPFV-CGCRNLGESLRRIREGAAMIRTKGE-AGTGNIVEAVRHVRSVMGD 187 (310)
Q Consensus 118 v~---~~~--~--~~~~~~~~~~~~-~~~~l~v~-~~v~t~~ea~~a~~~Gad~I~v~g~-~~~~~~~~~~~~~~~~~~~ 187 (310)
|- +++ . ..+.+.++..+. ...|+.++ ..+.++..+++..+.|+++|..+|. .+++.
T Consensus 106 iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~~~akrl~~~G~~aVmPlg~pIGsG~-------------- 171 (265)
T 1wv2_A 106 VKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAEIGCIAVMPLAGLIGSGL-------------- 171 (265)
T ss_dssp EEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHSCCSEEEECSSSTTCCC--------------
T ss_pred EEEEeecCccccCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCCCEEEeCCccCCCCC--------------
Confidence 53 221 1 124455555554 33567777 4788999999999999999988654 44431
Q ss_pred eecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHH
Q 037779 188 IRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARA 267 (310)
Q Consensus 188 ~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~ 267 (310)
++ .++++++.+.+..++|| |++|||+||+|+.+++++|||||+|||+|++++||..++++
T Consensus 172 -----------------Gi-~~~~lI~~I~e~~~vPV--I~eGGI~TPsDAa~AmeLGAdgVlVgSAI~~a~dP~~ma~a 231 (265)
T 1wv2_A 172 -----------------GI-CNPYNLRIILEEAKVPV--LVDAGVGTASDAAIAMELGCEAVLMNTAIAHAKDPVMMAEA 231 (265)
T ss_dssp -----------------CC-SCHHHHHHHHHHCSSCB--EEESCCCSHHHHHHHHHHTCSEEEESHHHHTSSSHHHHHHH
T ss_pred -----------------Cc-CCHHHHHHHHhcCCCCE--EEeCCCCCHHHHHHHHHcCCCEEEEChHHhCCCCHHHHHHH
Confidence 11 24778888888788999 67999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCChhhH
Q 037779 268 IVQAVTNYSDPDVL 281 (310)
Q Consensus 268 ~~~~~~~~~~~~~~ 281 (310)
|.+++++.+.....
T Consensus 232 f~~Av~aGr~a~~a 245 (265)
T 1wv2_A 232 MKHAIVAGRLAYLA 245 (265)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc
Confidence 99999876654433
No 45
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=99.48 E-value=2.8e-13 Score=135.05 Aligned_cols=211 Identities=17% Similarity=0.188 Sum_probs=130.4
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhc-CCC-CCCCChHHHHHHHhhcCcceEeeccccch-----------HHHHHHHH
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQ-GGV-ARMSDPQLIKQIKSSVTIPVMAKARIGHF-----------VEAQILEA 112 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~-~G~-~~~~~~~~i~~i~~~~~lPv~~kd~i~~~-----------~~~~~~~~ 112 (310)
++|+.|.++||++++.++ ...+ .|. .+..+.+.++++++.+.+|+++...+.+. +.++.+.+
T Consensus 284 ~~A~~~~~~Ga~~l~~~d-----l~~~~~~~~~~~~~~~~i~~i~~~~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~ 358 (555)
T 1jvn_A 284 QLAQKYYQQGADEVTFLN-----ITSFRDCPLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYFR 358 (555)
T ss_dssp HHHHHHHHTTCSEEEEEE-----EC---CCCGGGCHHHHHHHHHTTTCCSCEEEESSCSCEECTTCCEECHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEe-----CCccccccCCCchHHHHHHHHHhhCCCcEEEeCccccchhcccccchHHHHHHHHHH
Confidence 799999999999986652 2221 111 12234778899998899999988777654 45888999
Q ss_pred cCCCeeee-cCCC-------------ChhHHHHHHHh-cCC-CCcEEeecCC-----HHHH----HHHH---HhCCC---
Q 037779 113 IGVDYVDE-SEVL-------------TPADEENHINK-HNF-RVPFVCGCRN-----LGES----LRRI---REGAA--- 161 (310)
Q Consensus 113 aGad~v~~-~~~~-------------~~~~~~~~~~~-~~~-~l~v~~~v~t-----~~ea----~~a~---~~Gad--- 161 (310)
+|||.|.+ +... +.+++++.+.+ .+. .+.+.++++. +... .... ..|-.
T Consensus 359 aGad~V~igt~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ivv~iD~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 438 (555)
T 1jvn_A 359 SGADKVSIGTDAVYAAEKYYELGNRGDGTSPIETISKAYGAQAVVISVDPKRVYVNSQADTKNKVFETEYPGPNGEKYCW 438 (555)
T ss_dssp HTCSEEEECHHHHHHHHHHHHTTSCCCSCSHHHHHHHHHCGGGEEEEECEEEEEESSGGGCSSCCEECSSCCTTCCCEEE
T ss_pred cCCCEEEECCHHhhCchhhccccccccCHHHHHHHHHHhCCCcEEEEEEccccccccccccccccccccccCCCCCccee
Confidence 99999873 2211 11344555544 221 1444444431 0000 0000 00100
Q ss_pred -EEEEecCCC-CC-chHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHH
Q 037779 162 -MIRTKGEAG-TG-NIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADA 238 (310)
Q Consensus 162 -~I~v~g~~~-~~-~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di 238 (310)
.+.++|+.. ++ +..+..+.+.+++.+...+..+++|+. ..+.++++++.+++..++|| ||+|||+|++|+
T Consensus 439 ~~v~~~Gw~~~~~~~~~e~a~~~~~~Ga~~il~t~~~~dG~-----~~G~d~~li~~l~~~~~iPV--IasGGi~s~~d~ 511 (555)
T 1jvn_A 439 YQCTIKGGRESRDLGVWELTRACEALGAGEILLNCIDKDGS-----NSGYDLELIEHVKDAVKIPV--IASSGAGVPEHF 511 (555)
T ss_dssp EEEEETTTTEEEEEEHHHHHHHHHHTTCCEEEECCGGGTTT-----CSCCCHHHHHHHHHHCSSCE--EECSCCCSHHHH
T ss_pred EEEEEecCccCCCCCHHHHHHHHHHcCCCEEEEeCCCCCCC-----CCCCCHHHHHHHHHhCCccE--EEECCCCCHHHH
Confidence 223333321 10 123444444445555444444444443 13458999999999889999 789999999999
Q ss_pred HHHHH-cCCCEEEEccccccCCCHHHHHHHH
Q 037779 239 AMMMQ-LGCDGVFVGSGVFKSGDPVRRARAI 268 (310)
Q Consensus 239 ~~~~~-~GadgV~VGsai~~~~dp~~~~~~~ 268 (310)
.++++ .|+++|++||+|+..+.....++++
T Consensus 512 ~~~~~~~G~~gvivg~a~~~~~~~~~e~~~~ 542 (555)
T 1jvn_A 512 EEAFLKTRADACLGAGMFHRGEFTVNDVKEY 542 (555)
T ss_dssp HHHHHHSCCSEEEESHHHHTTSCCHHHHHHH
T ss_pred HHHHHhcCChHHHHHHHHHcCCCCHHHHHHH
Confidence 99998 8999999999999998877666554
No 46
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=99.48 E-value=6e-13 Score=118.26 Aligned_cols=188 Identities=14% Similarity=0.124 Sum_probs=128.6
Q ss_pred HHHHHHHHcCCcEEEe----cccccchhhhcCCCCCCCChHHHHHHHhh--cCcceEeeccccch-HHHHHHHHcCCCee
Q 037779 46 EQARIAEEAGACAVMA----LERVPADIRAQGGVARMSDPQLIKQIKSS--VTIPVMAKARIGHF-VEAQILEAIGVDYV 118 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~----l~~~~~d~r~~~G~~~~~~~~~i~~i~~~--~~lPv~~kd~i~~~-~~~~~~~~aGad~v 118 (310)
+.++.+.++|+++++. .+++|. . .|+ +..++++|+. .++|+.++.++.+. ..++.+.++|||.|
T Consensus 21 ~~i~~l~~~g~d~~h~DVmDg~Fvpn-~-~~G-------~~~v~~ir~~~~~~~~~dvhLmv~~p~~~i~~~~~aGad~i 91 (228)
T 3ovp_A 21 AECLRMLDSGADYLHLDVMDGHFVPN-I-TFG-------HPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQY 91 (228)
T ss_dssp HHHHHHHHTTCSCEEEEEEBSSSSSC-B-CBC-------HHHHHHHHHHHCSSSCEEEEEECSCGGGGHHHHHHHTCSEE
T ss_pred HHHHHHHHcCCCEEEEEecCCCcCcc-c-ccC-------HHHHHHHHHhhCCCCcEEEEEEeCCHHHHHHHHHHcCCCEE
Confidence 6789999999999743 224443 2 233 7899999998 58999888777543 34677888999998
Q ss_pred eec--CCCChhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEe--cCCCCCchHHHHHHHHHhhcceeccccc
Q 037779 119 DES--EVLTPADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTK--GEAGTGNIVEAVRHVRSVMGDIRVLRNM 194 (310)
Q Consensus 119 ~~~--~~~~~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~--g~~~~~~~~~~~~~~~~~~~~~~~l~~~ 194 (310)
..+ ....+.+.++.+++++....+.+...|+.+....+...+|+|.+. .+++++- . +
T Consensus 92 tvH~Ea~~~~~~~i~~i~~~G~k~gval~p~t~~e~l~~~l~~~D~Vl~msv~pGf~Gq------------------~-f 152 (228)
T 3ovp_A 92 TFHLEATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQ------------------K-F 152 (228)
T ss_dssp EEEGGGCSCHHHHHHHHHHTTCEEEEEECTTSCGGGTGGGGGGCSEEEEESSCTTTCSC------------------C-C
T ss_pred EEccCCchhHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHhccCCeEEEeeecCCCCCc------------------c-c
Confidence 843 223456677777765544444444455554443433457888653 2333321 0 0
Q ss_pred CchhHHhhhccCCCcHHHHHHHHhc-CCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHH
Q 037779 195 DDDEVFTFAKNIAAPYDLVMQTKQL-GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVT 273 (310)
Q Consensus 195 ~~d~~~~~~~~~~~~~~l~~~i~~~-~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~ 273 (310)
.....+.++.+++. .++|+ .+.||| +++++.++.++|||.+++||+|++++||.+.++++++.++
T Consensus 153 -----------~~~~l~ki~~lr~~~~~~~I--~VdGGI-~~~t~~~~~~aGAd~~VvGsaIf~a~dp~~~~~~l~~~~~ 218 (228)
T 3ovp_A 153 -----------MEDMMPKVHWLRTQFPSLDI--EVDGGV-GPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCS 218 (228)
T ss_dssp -----------CGGGHHHHHHHHHHCTTCEE--EEESSC-STTTHHHHHHHTCCEEEESHHHHTCSCHHHHHHHHHHHHH
T ss_pred -----------CHHHHHHHHHHHHhcCCCCE--EEeCCc-CHHHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHHH
Confidence 11134455666654 25677 458999 5999999999999999999999999999999999998876
Q ss_pred cC
Q 037779 274 NY 275 (310)
Q Consensus 274 ~~ 275 (310)
++
T Consensus 219 ~~ 220 (228)
T 3ovp_A 219 EA 220 (228)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 47
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=99.48 E-value=4.8e-13 Score=119.96 Aligned_cols=187 Identities=14% Similarity=0.154 Sum_probs=127.0
Q ss_pred HHHHHHHHcCCcEEEe----cccccchhhhcCCCCCCCChHHHHHHHhhc-CcceEeeccccch-HHHHHHHHcCCCeee
Q 037779 46 EQARIAEEAGACAVMA----LERVPADIRAQGGVARMSDPQLIKQIKSSV-TIPVMAKARIGHF-VEAQILEAIGVDYVD 119 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~----l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~-~lPv~~kd~i~~~-~~~~~~~~aGad~v~ 119 (310)
+.++.+.++|+++++. .+++|. . .|+ +..++++|+.+ ++|+.++-.+.+. ..++.+.++|||.+.
T Consensus 44 ~~i~~l~~~G~d~lHvDVmDg~FVpn-i-t~G-------~~~v~~lr~~~p~~~ldvHLmv~~p~~~i~~~~~aGAd~it 114 (246)
T 3inp_A 44 DDVKAVLAAGADNIHFDVMDNHYVPN-L-TFG-------PMVLKALRDYGITAGMDVHLMVKPVDALIESFAKAGATSIV 114 (246)
T ss_dssp HHHHHHHHTTCCCEEEEEEBSSSSSC-B-CCC-------HHHHHHHHHHTCCSCEEEEEECSSCHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHcCCCEEEEEecCCCcCcc-h-hcC-------HHHHHHHHHhCCCCeEEEEEeeCCHHHHHHHHHHcCCCEEE
Confidence 7799999999999732 224442 1 233 78999999998 9999998777644 345778889999998
Q ss_pred ec--CCCChhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEe--cCCCCCchHHHHHHHHHhhcceecccccC
Q 037779 120 ES--EVLTPADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTK--GEAGTGNIVEAVRHVRSVMGDIRVLRNMD 195 (310)
Q Consensus 120 ~~--~~~~~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~--g~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 195 (310)
.+ ....+.+.++.+++.+....+.+...|+.+..+......|+|.+. .+++++- +.
T Consensus 115 vH~Ea~~~~~~~i~~ir~~G~k~Gvalnp~Tp~e~l~~~l~~vD~VlvMsV~PGfgGQ------------------~f-- 174 (246)
T 3inp_A 115 FHPEASEHIDRSLQLIKSFGIQAGLALNPATGIDCLKYVESNIDRVLIMSVNPGFGGQ------------------KF-- 174 (246)
T ss_dssp ECGGGCSCHHHHHHHHHTTTSEEEEEECTTCCSGGGTTTGGGCSEEEEECSCTTC--C------------------CC--
T ss_pred EccccchhHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHhcCCEEEEeeecCCCCCc------------------cc--
Confidence 43 223456777777665444444444456555544444478888653 2333321 00
Q ss_pred chhHHhhhccCCCcHHHHHHHHhc-----CCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHH
Q 037779 196 DDEVFTFAKNIAAPYDLVMQTKQL-----GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQ 270 (310)
Q Consensus 196 ~d~~~~~~~~~~~~~~l~~~i~~~-----~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~ 270 (310)
.....+.++++++. .++++ -+.|||+ ++++.++.++|||.+++||+|++++||.+.++++++
T Consensus 175 ----------i~~~l~KI~~lr~~~~~~~~~~~I--~VDGGI~-~~ti~~~~~aGAD~~V~GSaIf~a~dp~~~i~~l~~ 241 (246)
T 3inp_A 175 ----------IPAMLDKAKEISKWISSTDRDILL--EIDGGVN-PYNIAEIAVCGVNAFVAGSAIFNSDSYKQTIDKMRD 241 (246)
T ss_dssp ----------CTTHHHHHHHHHHHHHHHTSCCEE--EEESSCC-TTTHHHHHTTTCCEEEESHHHHTSSCHHHHHHHHHH
T ss_pred ----------chHHHHHHHHHHHHHHhcCCCeeE--EEECCcC-HHHHHHHHHcCCCEEEEehHHhCCCCHHHHHHHHHH
Confidence 11123334444332 24666 4579995 999999999999999999999999999999999998
Q ss_pred HHHc
Q 037779 271 AVTN 274 (310)
Q Consensus 271 ~~~~ 274 (310)
.+.+
T Consensus 242 ~i~~ 245 (246)
T 3inp_A 242 ELNK 245 (246)
T ss_dssp HHHT
T ss_pred HHhh
Confidence 7753
No 48
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=99.48 E-value=5.4e-13 Score=118.05 Aligned_cols=165 Identities=20% Similarity=0.290 Sum_probs=122.5
Q ss_pred hHHHHHHHhhcCcceEeeccccchHH---------HHHHHHcCCCeee-ecCC--CChhHHHHHHHh-cCCCCcEEeecC
Q 037779 81 PQLIKQIKSSVTIPVMAKARIGHFVE---------AQILEAIGVDYVD-ESEV--LTPADEENHINK-HNFRVPFVCGCR 147 (310)
Q Consensus 81 ~~~i~~i~~~~~lPv~~kd~i~~~~~---------~~~~~~aGad~v~-~~~~--~~~~~~~~~~~~-~~~~l~v~~~v~ 147 (310)
+..+..+++.+++|+.++| + ++.+ +..+.++||++|+ +++. +...++.+.+.. +..|+.++++++
T Consensus 45 ~~~L~~v~~~~~i~v~aQd-v-~~~~~Ga~TGeis~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~GL~~ivcVg 122 (226)
T 1w0m_A 45 HLELGLVSQSVDIPVYAQG-A-DVEAGGAHTAHVSLENIKEAGGSGVILNHSEAPLKLNDLARLVAKAKSLGLDVVVCAP 122 (226)
T ss_dssp GGGHHHHHTTCSSCBEESC-C-SBSSCSSCTTCCBHHHHHHHTCCEEEECCTTSCCBHHHHHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHhcCCceEeeE-C-ChhhCCCccCCCCHHHHHHcCCCEEEEeeeeccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 7788999988899999998 3 2234 7788999999998 5544 444555555554 557899999999
Q ss_pred CHHHHHHHHHhCCCEEEEecC--CCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEE
Q 037779 148 NLGESLRRIREGAAMIRTKGE--AGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVV 225 (310)
Q Consensus 148 t~~ea~~a~~~Gad~I~v~g~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv 225 (310)
+..|...+...++++|.++.. .+||..+ .+.++|.+ ....++++.+.+ ++++
T Consensus 123 e~~e~~~~~~~~~~iIayep~waiGtG~~v----------------~t~~~d~~-------~~~~~~ir~~~~--~~~i- 176 (226)
T 1w0m_A 123 DPRTSLAAAALGPHAVAVEPPELIGTGRAV----------------SRYKPEAI-------VETVGLVSRHFP--EVSV- 176 (226)
T ss_dssp SHHHHHHHHHTCCSEEEECCGGGTTTSCCH----------------HHHCHHHH-------HHHHHHHHHHCT--TSEE-
T ss_pred CHHHHHHHhcCCCCEEEEcChhhhccCCCC----------------CCCChhHH-------HHHHHHHHhccC--CCEE-
Confidence 999998888889999999844 3444110 11122211 112344444432 4566
Q ss_pred EEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHc
Q 037779 226 HFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTN 274 (310)
Q Consensus 226 ~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~ 274 (310)
+++|||++.+++..+.+.|+||++||+++++++||.+.++++..++.+
T Consensus 177 -lyggsV~~~n~~~~~~~~giDG~LVG~a~l~a~~~~~~i~~l~~~~~~ 224 (226)
T 1w0m_A 177 -ITGAGIESGDDVAAALRLGTRGVLLASAAVKAKDPYAKIVELAKPLSE 224 (226)
T ss_dssp -EEESSCCSHHHHHHHHHTTCSEEEECHHHHTCSSHHHHHHHHHHHHHH
T ss_pred -EEeCCCCcHHHHHHHHhCCCCEEEECHHHHCCcCHHHHHHHHHHHHHh
Confidence 789999999999999999999999999999999999999999888754
No 49
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=99.47 E-value=3.9e-12 Score=120.61 Aligned_cols=197 Identities=18% Similarity=0.167 Sum_probs=130.4
Q ss_pred cCCCHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeecccc------------------
Q 037779 41 DVVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIG------------------ 102 (310)
Q Consensus 41 ~~~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~------------------ 102 (310)
...+++++.++.++|+-++...+..+.+. . .+.++++++.++-|+-++.+..
T Consensus 21 gvs~~~la~av~~aGglG~i~~~~~s~~~--l--------~~~i~~~~~~~~~p~gVnl~~~~~~~~~~~~~~~~~~~l~ 90 (369)
T 3bw2_A 21 GVSVPQLAAAVCEAGGLGFLAAGYKTADG--M--------YQEIKRLRGLTGRPFGVNVFMPQPELAESGAVEVYAHQLA 90 (369)
T ss_dssp TTSCHHHHHHHHHTTSBEEEECTTSCHHH--H--------HHHHHHHHHHCCSCEEEEEECCCCCC---CHHHHHHHHTH
T ss_pred CCCcHHHHHHHHHCCCEEEcCCCCCCHHH--H--------HHHHHHHHHhCCCCeEEEEecCCCCcccHHHHHHHHHHHH
Confidence 36789999999999987763221111000 0 2345566666666665553321
Q ss_pred --------------------chHHHHHHHHcCCCeeeecCCCChhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCE
Q 037779 103 --------------------HFVEAQILEAIGVDYVDESEVLTPADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAM 162 (310)
Q Consensus 103 --------------------~~~~~~~~~~aGad~v~~~~~~~~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~ 162 (310)
..+.++.+.+.|++.|..+...++.++++.+++ .+++++..++|.+++.++.+.|+|+
T Consensus 91 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~V~~~~g~~~~~~i~~~~~--~g~~v~~~v~t~~~a~~a~~~GaD~ 168 (369)
T 3bw2_A 91 GEAAWYETELGDPDGGRDDGYDAKLAVLLDDPVPVVSFHFGVPDREVIARLRR--AGTLTLVTATTPEEARAVEAAGADA 168 (369)
T ss_dssp HHHHHTTCCCCCSCSCSSTTHHHHHHHHHHSCCSEEEEESSCCCHHHHHHHHH--TTCEEEEEESSHHHHHHHHHTTCSE
T ss_pred HHHHHcCCCcCcccccccccHHHHHHHHHhcCCCEEEEeCCCCcHHHHHHHHH--CCCeEEEECCCHHHHHHHHHcCCCE
Confidence 023457778899999875533334566677765 4678899999999999999999999
Q ss_pred EEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccC-CCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHH
Q 037779 163 IRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNI-AAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMM 241 (310)
Q Consensus 163 I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~-~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~ 241 (310)
|.+.|+.++++. .+..++.. .... ...+++++.+++..++|| |++|||.+++++.++
T Consensus 169 i~v~g~~~GGh~-----------------g~~~~~~~---~~~~~~~~~~~l~~i~~~~~iPV--iaaGGI~~~~~~~~~ 226 (369)
T 3bw2_A 169 VIAQGVEAGGHQ-----------------GTHRDSSE---DDGAGIGLLSLLAQVREAVDIPV--VAAGGIMRGGQIAAV 226 (369)
T ss_dssp EEEECTTCSEEC-----------------CCSSCCGG---GTTCCCCHHHHHHHHHHHCSSCE--EEESSCCSHHHHHHH
T ss_pred EEEeCCCcCCcC-----------------CCcccccc---cccccccHHHHHHHHHHhcCceE--EEECCCCCHHHHHHH
Confidence 999765433321 00000000 0000 113788888887678999 678999999999999
Q ss_pred HHcCCCEEEEccccccCCCHHHHHHHHHHHH
Q 037779 242 MQLGCDGVFVGSGVFKSGDPVRRARAIVQAV 272 (310)
Q Consensus 242 ~~~GadgV~VGsai~~~~dp~~~~~~~~~~~ 272 (310)
+++|||+|.+||+|+.++++.. .+.+++.+
T Consensus 227 l~~GAd~V~vGs~~~~~~e~~~-~~~~k~~i 256 (369)
T 3bw2_A 227 LAAGADAAQLGTAFLATDESGA-PGPHKRAL 256 (369)
T ss_dssp HHTTCSEEEESHHHHTSTTCCC-CHHHHHHT
T ss_pred HHcCCCEEEEChHHhCCcccCc-cHHHHHHH
Confidence 9999999999999999887642 23444443
No 50
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=99.46 E-value=5.1e-12 Score=112.17 Aligned_cols=158 Identities=12% Similarity=0.146 Sum_probs=115.8
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeeeecCCC
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVDESEVL 124 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~~~~~~ 124 (310)
.++++++.++|++.| .+ +... ....+.++++++.+.-.++.-.-+.+.++++.+.++||++|+.+.
T Consensus 49 ~~~a~al~~gGi~~i-Ev-------t~~t----~~a~e~I~~l~~~~~~~~iGaGTVlt~~~a~~Ai~AGA~fIvsP~-- 114 (232)
T 4e38_A 49 IPLGKVLAENGLPAA-EI-------TFRS----DAAVEAIRLLRQAQPEMLIGAGTILNGEQALAAKEAGATFVVSPG-- 114 (232)
T ss_dssp HHHHHHHHHTTCCEE-EE-------ETTS----TTHHHHHHHHHHHCTTCEEEEECCCSHHHHHHHHHHTCSEEECSS--
T ss_pred HHHHHHHHHCCCCEE-EE-------eCCC----CCHHHHHHHHHHhCCCCEEeECCcCCHHHHHHHHHcCCCEEEeCC--
Confidence 478999999999998 33 1111 112678888888763223222223356889999999999998543
Q ss_pred ChhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhc
Q 037779 125 TPADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAK 204 (310)
Q Consensus 125 ~~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~ 204 (310)
...++.+.+++ .+++++.++.|+.|+.+|.++|+|+++++....
T Consensus 115 ~~~~vi~~~~~--~gi~~ipGv~TptEi~~A~~~Gad~vK~FPa~~---------------------------------- 158 (232)
T 4e38_A 115 FNPNTVRACQE--IGIDIVPGVNNPSTVEAALEMGLTTLKFFPAEA---------------------------------- 158 (232)
T ss_dssp CCHHHHHHHHH--HTCEEECEECSHHHHHHHHHTTCCEEEECSTTT----------------------------------
T ss_pred CCHHHHHHHHH--cCCCEEcCCCCHHHHHHHHHcCCCEEEECcCcc----------------------------------
Confidence 24566666665 378999999999999999999999999863210
Q ss_pred cCCCcHHHHHHHHhc-CCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEcccccc
Q 037779 205 NIAAPYDLVMQTKQL-GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 205 ~~~~~~~l~~~i~~~-~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~ 257 (310)
....++++.++.- .++|+ ++.||| +++++.+++++|+.++++||.++.
T Consensus 159 --~gG~~~lkal~~p~p~ip~--~ptGGI-~~~n~~~~l~aGa~~~vgGs~l~~ 207 (232)
T 4e38_A 159 --SGGISMVKSLVGPYGDIRL--MPTGGI-TPSNIDNYLAIPQVLACGGTWMVD 207 (232)
T ss_dssp --TTHHHHHHHHHTTCTTCEE--EEBSSC-CTTTHHHHHTSTTBCCEEECGGGC
T ss_pred --ccCHHHHHHHHHHhcCCCe--eeEcCC-CHHHHHHHHHCCCeEEEECchhcC
Confidence 0124566666653 46888 578999 599999999999999999999985
No 51
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=99.46 E-value=2.8e-12 Score=116.01 Aligned_cols=196 Identities=16% Similarity=0.219 Sum_probs=120.7
Q ss_pred HHHHHHHHcCCcEEEecccccchh------------hh-cCCCCCCCChHHHHHHHhhcCcceEeeccccch--HHHHHH
Q 037779 46 EQARIAEEAGACAVMALERVPADI------------RA-QGGVARMSDPQLIKQIKSSVTIPVMAKARIGHF--VEAQIL 110 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~------------r~-~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~--~~~~~~ 110 (310)
+.++.+.++|+++|+.-.|.. |+ +. ..|......++.++++++.+++|+++.+..+.. ..++.+
T Consensus 36 ~~~~~l~~~Gad~ielg~p~~-dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~~~Pv~~m~~~~~~~~~~~~~a 114 (262)
T 1rd5_A 36 EALRLLDGCGADVIELGVPCS-DPYIDGPIIQASVARALASGTTMDAVLEMLREVTPELSCPVVLLSYYKPIMFRSLAKM 114 (262)
T ss_dssp HHHHHHHHTTCSSEEEECCCS-CCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGCSSCEEEECCSHHHHSCCTHHH
T ss_pred HHHHHHHHcCCCEEEECCCCC-CcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEEEEecCcHHHHHHHHHH
Confidence 679999999999984321222 10 00 011111112567888998899999876433210 012348
Q ss_pred HHcCCCeeeecCCC--ChhHHHHHHHhcCCCCcEEeecCCHH-HHHHHHHhCCCEEEEec-CCCCCchHHHHHHHHHhhc
Q 037779 111 EAIGVDYVDESEVL--TPADEENHINKHNFRVPFVCGCRNLG-ESLRRIREGAAMIRTKG-EAGTGNIVEAVRHVRSVMG 186 (310)
Q Consensus 111 ~~aGad~v~~~~~~--~~~~~~~~~~~~~~~l~v~~~v~t~~-ea~~a~~~Gad~I~v~g-~~~~~~~~~~~~~~~~~~~ 186 (310)
.++|+|+++.++.. ...++.+.+++++....+++..++.. .++...+.+.+++.+.. ..+++.-
T Consensus 115 ~~aGadgv~v~d~~~~~~~~~~~~~~~~g~~~i~~~a~~t~~e~~~~~~~~~~g~v~~~s~~G~tG~~------------ 182 (262)
T 1rd5_A 115 KEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDRMKEITKASEGFVYLVSVNGVTGPR------------ 182 (262)
T ss_dssp HHTTCCEEECTTCBTTTHHHHHHHHHHTTCEECEEECTTSCHHHHHHHHHHCCSCEEEECSSCCBCTT------------
T ss_pred HHcCCCEEEEcCCChhhHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHhcCCCeEEEecCCCCCCCC------------
Confidence 88999998865431 24455666666665555555555544 44555666667775542 2223210
Q ss_pred ceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCC----CHH
Q 037779 187 DIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSG----DPV 262 (310)
Q Consensus 187 ~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~----dp~ 262 (310)
..+ .....++++.+++..++|| ++.|||+|++++.+++++|||+|+|||+|++.. +|.
T Consensus 183 -----~~~-----------~~~~~~~i~~v~~~~~~pI--~vgGGI~~~e~~~~~~~~GAdgvvVGSai~~~~~~~~~~~ 244 (262)
T 1rd5_A 183 -----ANV-----------NPRVESLIQEVKKVTNKPV--AVGFGISKPEHVKQIAQWGADGVIIGSAMVRQLGEAASPK 244 (262)
T ss_dssp -----SCB-----------CTHHHHHHHHHHHHCSSCE--EEESCCCSHHHHHHHHHTTCSEEEECHHHHHHHHSSSSHH
T ss_pred -----cCC-----------CchHHHHHHHHHhhcCCeE--EEECCcCCHHHHHHHHHcCCCEEEEChHHHhHHHhccChh
Confidence 000 0113457778877678999 568999999999999999999999999999853 344
Q ss_pred H---HHHHHHHHH
Q 037779 263 R---RARAIVQAV 272 (310)
Q Consensus 263 ~---~~~~~~~~~ 272 (310)
. .+++|.+.+
T Consensus 245 ~~~~~~~~~~~~l 257 (262)
T 1rd5_A 245 QGLRRLEEYARGM 257 (262)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3 445555444
No 52
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=99.46 E-value=1.2e-12 Score=118.76 Aligned_cols=190 Identities=19% Similarity=0.222 Sum_probs=119.0
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcC-CCCCCCChHHHHHHHhhcCcceEeecccc-chH----HHHHHHHcCCCee-
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQG-GVARMSDPQLIKQIKSSVTIPVMAKARIG-HFV----EAQILEAIGVDYV- 118 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~-G~~~~~~~~~i~~i~~~~~lPv~~kd~i~-~~~----~~~~~~~aGad~v- 118 (310)
+..+.+.++|++.| .+. . +|.-. |... .+.++.++ ..+.+++.+.... ..+ .++.+.++|.+.+
T Consensus 27 ~~~~~l~~~Gad~i-elg-~---pr~~~~g~~~---~~~~~~l~-~~~~~~~pn~~~~~~~~~~~~f~~~a~~agg~~~i 97 (264)
T 1xm3_A 27 IQKEAVAVSESDIL-TFA-V---RRMNIFEASQ---PNFLEQLD-LSKYTLLPNTAGASTAEEAVRIARLAKASGLCDMI 97 (264)
T ss_dssp HHHHHHHHHTCSEE-EEE-T---TSSTTC----------CTTCC-GGGSEEEEECTTCSSHHHHHHHHHHHHHTTCCSSE
T ss_pred HHHHHHHHcCCeEE-EEc-c---cccccCCCCH---HHHHHHHH-hcCCeEcCCccccCCHHHHHHHHHHHHHcCCCCeE
Confidence 56789999999998 331 1 11100 1100 11122222 2345555554321 112 4556666654443
Q ss_pred e---ecCC----CChhHHHHHHHhc-CCCCcEE-eecCCHHHHHHHHHhCCCEEEEecCC-CCCchHHHHHHHHHhhcce
Q 037779 119 D---ESEV----LTPADEENHINKH-NFRVPFV-CGCRNLGESLRRIREGAAMIRTKGEA-GTGNIVEAVRHVRSVMGDI 188 (310)
Q Consensus 119 ~---~~~~----~~~~~~~~~~~~~-~~~l~v~-~~v~t~~ea~~a~~~Gad~I~v~g~~-~~~~~~~~~~~~~~~~~~~ 188 (310)
. ..+. ....++.+.+++. +.++.++ ..++|.++++++.+.|+|+|...+.. +++.
T Consensus 98 ~l~i~~d~~~~~~e~~~~~~~a~~~~~~g~~vi~~~~~~~~~a~~~~~~gad~v~~~~~~~Gt~~--------------- 162 (264)
T 1xm3_A 98 KVEVIGCSRSLLPDPVETLKASEQLLEEGFIVLPYTSDDVVLARKLEELGVHAIMPGASPIGSGQ--------------- 162 (264)
T ss_dssp EECCBCCTTTCCBCHHHHHHHHHHHHHTTCCEEEEECSCHHHHHHHHHHTCSCBEECSSSTTCCC---------------
T ss_pred EEeecCCCcccccchHHHHHHHHHHHCCCeEEEEEcCCCHHHHHHHHHhCCCEEEECCcccCCCC---------------
Confidence 2 2222 1223555656552 3366666 67788999999999999999543221 1110
Q ss_pred ecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHH
Q 037779 189 RVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAI 268 (310)
Q Consensus 189 ~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~ 268 (310)
+. ...+.++++++..++|| ++.|||++++|+.+++++|||||+|||+|++++||.+++++|
T Consensus 163 ----------------~~-~~~~~l~~i~~~~~iPv--iv~gGI~t~eda~~~~~~GAdgViVGSAi~~a~dp~~~~~~l 223 (264)
T 1xm3_A 163 ----------------GI-LNPLNLSFIIEQAKVPV--IVDAGIGSPKDAAYAMELGADGVLLNTAVSGADDPVKMARAM 223 (264)
T ss_dssp ----------------CC-SCHHHHHHHHHHCSSCB--EEESCCCSHHHHHHHHHTTCSEEEESHHHHTSSSHHHHHHHH
T ss_pred ----------------CC-CCHHHHHHHHhcCCCCE--EEEeCCCCHHHHHHHHHcCCCEEEEcHHHhCCCCHHHHHHHH
Confidence 11 13556777777678999 567999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCh
Q 037779 269 VQAVTNYSDP 278 (310)
Q Consensus 269 ~~~~~~~~~~ 278 (310)
++.+++.+..
T Consensus 224 ~~~v~~~~~~ 233 (264)
T 1xm3_A 224 KLAVEAGRLS 233 (264)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9998764433
No 53
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=99.45 E-value=9.2e-13 Score=117.80 Aligned_cols=194 Identities=19% Similarity=0.196 Sum_probs=123.9
Q ss_pred HHHHHHHHHcCCcEE-EecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeecccc-chHHHHH----HHH-cCCCe
Q 037779 45 PEQARIAEEAGACAV-MALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIG-HFVEAQI----LEA-IGVDY 117 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I-~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~-~~~~~~~----~~~-aGad~ 117 (310)
..+.+++..+|+..+ ..+++++.. ... ....+..+. +++++.++--. +.+++.. ..+ .|-+.
T Consensus 26 ~~~~~ai~asg~eivtva~rR~~~~-~~~-------~~~~~~~i~---~~~~lpntaG~~taeeAv~~a~lare~~gt~~ 94 (268)
T 2htm_A 26 GVMREAIAAAKAEVVTVSVRRVELK-APG-------HVGLLEALE---GVRLLPNTAGARTAEEAVRLARLGRLLTGERW 94 (268)
T ss_dssp HHHHHHHHHTTCSEEEEEEEECC---------------CHHHHTT---TSEEEEBCTTCCSHHHHHHHHHHHHHHHCCSE
T ss_pred HHHHHHHHHhCCCEEEEEccccCCC-CCC-------cccHHHHHh---hhhccCcccCCCCHHHHHHHHHhhhHhcCcce
Confidence 357888888999987 223333210 000 022333333 66666665443 3333322 222 45555
Q ss_pred ee---e--cCCC--ChhHHHHHHHhc-CCCCcEE-eecCCHHHHHHHHHhCCCEEEEecC-CCCCchHHHHHHHHHhhcc
Q 037779 118 VD---E--SEVL--TPADEENHINKH-NFRVPFV-CGCRNLGESLRRIREGAAMIRTKGE-AGTGNIVEAVRHVRSVMGD 187 (310)
Q Consensus 118 v~---~--~~~~--~~~~~~~~~~~~-~~~l~v~-~~v~t~~ea~~a~~~Gad~I~v~g~-~~~~~~~~~~~~~~~~~~~ 187 (310)
|- + +..+ .+.+.++..+.. .-|+.++ ....++..+++..+.|+++|..++. ++++.
T Consensus 95 iKlEvi~d~~~l~pD~~~tv~aa~~L~k~Gf~Vlpy~~~D~~~ak~l~~~G~~aVmPlg~pIGsG~-------------- 160 (268)
T 2htm_A 95 VKLEVIPDPTYLLPDPLETLKAAERLIEEDFLVLPYMGPDLVLAKRLAALGTATVMPLAAPIGSGW-------------- 160 (268)
T ss_dssp EBCCCCSCTTTTCCCHHHHHHHHHHHHHTTCEECCEECSCHHHHHHHHHHTCSCBEEBSSSTTTCC--------------
T ss_pred eeeeeccCccccCcCHHHHHHHHHHHHHCCCEEeeccCCCHHHHHHHHhcCCCEEEecCccCcCCc--------------
Confidence 42 1 1222 233444444441 2245555 3457888889999999999988644 45441
Q ss_pred eecccccCchhHHhhhccCCCcHHHHHHHHh-cCC-CCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHH
Q 037779 188 IRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQ-LGR-LPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRA 265 (310)
Q Consensus 188 ~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~-~~~-iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~ 265 (310)
++. ..++++.+.+ ..+ +|| |++|||++|+|+.+++++|||||+|||+|++++||..++
T Consensus 161 -----------------Gi~-~~~~L~~i~~~~~~~vPV--I~~GGI~tpsDAa~AmeLGAdgVlVgSAI~~a~dP~~ma 220 (268)
T 2htm_A 161 -----------------GVR-TRALLELFAREKASLPPV--VVDAGLGLPSHAAEVMELGLDAVLVNTAIAEAQDPPAMA 220 (268)
T ss_dssp -----------------CST-THHHHHHHHHTTTTSSCB--EEESCCCSHHHHHHHHHTTCCEEEESHHHHTSSSHHHHH
T ss_pred -----------------ccC-CHHHHHHHHHhcCCCCeE--EEeCCCCCHHHHHHHHHcCCCEEEEChHHhCCCCHHHHH
Confidence 122 3556777777 567 999 569999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhHHh
Q 037779 266 RAIVQAVTNYSDPDVLAE 283 (310)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~ 283 (310)
++|++++++.+.......
T Consensus 221 ~af~~Av~agr~a~~ag~ 238 (268)
T 2htm_A 221 EAFRLAVEAGRKAYLAGP 238 (268)
T ss_dssp HHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHcCC
Confidence 999999998766544433
No 54
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=99.45 E-value=6.8e-13 Score=117.40 Aligned_cols=162 Identities=22% Similarity=0.288 Sum_probs=119.0
Q ss_pred hHHHHHHHhhcCcceEeeccccchHH---------HHHHHHcCCCeee-ecCC--CChhHHHHHHHh-cCCCCcEEeecC
Q 037779 81 PQLIKQIKSSVTIPVMAKARIGHFVE---------AQILEAIGVDYVD-ESEV--LTPADEENHINK-HNFRVPFVCGCR 147 (310)
Q Consensus 81 ~~~i~~i~~~~~lPv~~kd~i~~~~~---------~~~~~~aGad~v~-~~~~--~~~~~~~~~~~~-~~~~l~v~~~v~ 147 (310)
+..+..+++.+++|+.++| + ++.+ +..+.++|||+|+ +++. +...++.+.+.. +..|+.++++++
T Consensus 48 ~~~L~~v~~~~~i~v~aQd-v-~~~~~Ga~TGeis~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~GL~~ivcVg 125 (225)
T 1hg3_A 48 LVDLRMIAESVEIPVFAQH-I-DPIKPGSHTGHVLPEAVKEAGAVGTLLNHSENRMILADLEAAIRRAEEVGLMTMVCSN 125 (225)
T ss_dssp HHHHHHHHHSCSSCBEESC-C-CSCCSBSCTTCCCHHHHHHTTCCEEEESCGGGCCBHHHHHHHHHHHHHHTCEEEEEES
T ss_pred HHHHHHHHHhcCCceeeee-C-CcccCCCccCcccHHHHHHcCCCEEEECcchhcCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 8899999998999999998 3 2234 7788999999998 5543 444455555544 556899999999
Q ss_pred CHHHHHHHHHhCCCEEEEecC--CCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEE
Q 037779 148 NLGESLRRIREGAAMIRTKGE--AGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVV 225 (310)
Q Consensus 148 t~~ea~~a~~~Gad~I~v~g~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv 225 (310)
+..|...+...++++|.++.. .+||.. ..+.++|.+ ....++++.+.+ ++++
T Consensus 126 e~~e~~~~~~~~~~iIayep~waiGtG~~----------------v~t~~~d~~-------~~~~~~ir~~~~--~~~i- 179 (225)
T 1hg3_A 126 NPAVSAAVAALNPDYVAVEPPELIGTGIP----------------VSKAKPEVI-------TNTVELVKKVNP--EVKV- 179 (225)
T ss_dssp SHHHHHHHHTTCCSEEEECCTTTTTTSCC----------------TTTSCTHHH-------HHHHHHHHHHCT--TSEE-
T ss_pred CHHHHHHHhcCCCCEEEEeChhhhccCCC----------------CCCCChhHH-------HHHHHHHHhccC--CCEE-
Confidence 999998888889999999844 233310 012222211 112344444432 4556
Q ss_pred EEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHH
Q 037779 226 HFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQA 271 (310)
Q Consensus 226 ~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~ 271 (310)
+++|||++.+++..+.+.|+||++||+++++++||.+.++++.++
T Consensus 180 -lyggsV~~~n~~~~~~~~~vDG~LVG~a~l~a~~~~~~i~~l~~~ 224 (225)
T 1hg3_A 180 -LCGAGISTGEDVKKAIELGTVGVLLASGVTKAKDPEKAIWDLVSG 224 (225)
T ss_dssp -EEESSCCSHHHHHHHHHTTCSEEEESHHHHTCSSHHHHHHHHHHT
T ss_pred -EEeCCCCcHHHHHHHHhCCCCEEEeCHHHHCCcCHHHHHHHHHhh
Confidence 789999999999999999999999999999999999998888754
No 55
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=99.44 E-value=9.6e-12 Score=110.15 Aligned_cols=157 Identities=10% Similarity=0.113 Sum_probs=112.7
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhc-CcceEeeccccchHHHHHHHHcCCCeeeecCC
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSV-TIPVMAKARIGHFVEAQILEAIGVDYVDESEV 123 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~-~lPv~~kd~i~~~~~~~~~~~aGad~v~~~~~ 123 (310)
.+.++++.++|++.+ ++ +.+. ....+.++++++.+ ++.+.....+ ..++++.+.++|||+++.+.
T Consensus 32 ~~~~~al~~gGv~~i-el-------~~k~----~~~~~~i~~l~~~~~~l~vgaGtvl-~~d~~~~A~~aGAd~v~~p~- 97 (224)
T 1vhc_A 32 LPLADTLAKNGLSVA-EI-------TFRS----EAAADAIRLLRANRPDFLIAAGTVL-TAEQVVLAKSSGADFVVTPG- 97 (224)
T ss_dssp HHHHHHHHHTTCCEE-EE-------ETTS----TTHHHHHHHHHHHCTTCEEEEESCC-SHHHHHHHHHHTCSEEECSS-
T ss_pred HHHHHHHHHcCCCEE-EE-------eccC----chHHHHHHHHHHhCcCcEEeeCcEe-eHHHHHHHHHCCCCEEEECC-
Confidence 478999999999998 44 2211 11255677777776 4444444432 45889999999999998442
Q ss_pred CChhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhh
Q 037779 124 LTPADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFA 203 (310)
Q Consensus 124 ~~~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~ 203 (310)
...++.+..++ .+.+.+.+++|+.|+.++.+.|+||++++.. .
T Consensus 98 -~d~~v~~~ar~--~g~~~i~Gv~t~~e~~~A~~~Gad~vk~Fpa-~--------------------------------- 140 (224)
T 1vhc_A 98 -LNPKIVKLCQD--LNFPITPGVNNPMAIEIALEMGISAVKFFPA-E--------------------------------- 140 (224)
T ss_dssp -CCHHHHHHHHH--TTCCEECEECSHHHHHHHHHTTCCEEEETTT-T---------------------------------
T ss_pred -CCHHHHHHHHH--hCCCEEeccCCHHHHHHHHHCCCCEEEEeeC-c---------------------------------
Confidence 23455555655 4566777899999999999999999999621 0
Q ss_pred ccCCCcHHHHHHHHhcC-CCCEEEEccCCCCCHHHHHHHHHc-CCCEEEEccccccC
Q 037779 204 KNIAAPYDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQL-GCDGVFVGSGVFKS 258 (310)
Q Consensus 204 ~~~~~~~~l~~~i~~~~-~iPVv~ia~GGI~t~~di~~~~~~-GadgV~VGsai~~~ 258 (310)
.....+.++.++... ++|+ ++.||| +++++.+++++ |+++|. ||+|+.+
T Consensus 141 --~~gG~~~lk~l~~~~~~ipv--vaiGGI-~~~N~~~~l~agga~~v~-gS~i~~~ 191 (224)
T 1vhc_A 141 --ASGGVKMIKALLGPYAQLQI--MPTGGI-GLHNIRDYLAIPNIVACG-GSWFVEK 191 (224)
T ss_dssp --TTTHHHHHHHHHTTTTTCEE--EEBSSC-CTTTHHHHHTSTTBCCEE-ECGGGCH
T ss_pred --cccCHHHHHHHHhhCCCCeE--EEECCc-CHHHHHHHHhcCCCEEEE-EchhcCc
Confidence 001245566666654 6899 456999 59999999999 999999 9999984
No 56
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=99.44 E-value=1.7e-12 Score=115.58 Aligned_cols=186 Identities=18% Similarity=0.197 Sum_probs=127.8
Q ss_pred HHHHHHHHcCCcEEE-e---cccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchH-HHHHHHHcCCCeeee
Q 037779 46 EQARIAEEAGACAVM-A---LERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFV-EAQILEAIGVDYVDE 120 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~-~---l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~-~~~~~~~aGad~v~~ 120 (310)
+.++.+ ++|+++++ + .+++|. . .|+ +..++++|+.++.|+.+...+.+.+ .++.+.++|||.+..
T Consensus 17 ~~i~~~-~~gad~lHvDvmDG~fvpn-~-t~G-------~~~v~~lr~~~~~~~dvhLmv~dp~~~i~~~~~aGAd~itv 86 (231)
T 3ctl_A 17 EQIEFI-DSHADYFHIDIMDGHFVPN-L-TLS-------PFFVSQVKKLATKPLDCHLMVTRPQDYIAQLARAGADFITL 86 (231)
T ss_dssp HHHHHH-HTTCSCEEEEEECSSSSSC-C-CBC-------HHHHHHHHTTCCSCEEEEEESSCGGGTHHHHHHHTCSEEEE
T ss_pred HHHHHH-HcCCCEEEEEEEeCccCcc-c-hhc-------HHHHHHHHhccCCcEEEEEEecCHHHHHHHHHHcCCCEEEE
Confidence 667788 99999962 2 224442 2 343 7899999999899998887776433 357888999999874
Q ss_pred c--C-CCChhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEe--cCCCCCchHHHHHHHHHhhcceecccccC
Q 037779 121 S--E-VLTPADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTK--GEAGTGNIVEAVRHVRSVMGDIRVLRNMD 195 (310)
Q Consensus 121 ~--~-~~~~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~--g~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 195 (310)
+ . ...+.+.++.+++++....+.+...|+.+..+.+..++|+|.+. .+++++- ..
T Consensus 87 h~Ea~~~~~~~~i~~i~~~G~k~gv~lnp~tp~~~~~~~l~~~D~VlvmsV~pGfggQ------------------~f-- 146 (231)
T 3ctl_A 87 HPETINGQAFRLIDEIRRHDMKVGLILNPETPVEAMKYYIHKADKITVMTVDPGFAGQ------------------PF-- 146 (231)
T ss_dssp CGGGCTTTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGGGCSEEEEESSCTTCSSC------------------CC--
T ss_pred CcccCCccHHHHHHHHHHcCCeEEEEEECCCcHHHHHHHHhcCCEEEEeeeccCcCCc------------------cc--
Confidence 3 2 23466777777775544445555567666655555689988643 2333321 00
Q ss_pred chhHHhhhccCCCcHHHHHHHHhc-----CCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEc-cccccCCC-HHHHHHHH
Q 037779 196 DDEVFTFAKNIAAPYDLVMQTKQL-----GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVG-SGVFKSGD-PVRRARAI 268 (310)
Q Consensus 196 ~d~~~~~~~~~~~~~~l~~~i~~~-----~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VG-sai~~~~d-p~~~~~~~ 268 (310)
.....+.++.+++. .++++ -+.||| +++++.++.++|||.+++| |+|++++| |.+.+++|
T Consensus 147 ----------~~~~l~kI~~lr~~~~~~~~~~~I--~VdGGI-~~~~~~~~~~aGAd~~V~G~saif~~~d~~~~~~~~l 213 (231)
T 3ctl_A 147 ----------IPEMLDKLAELKAWREREGLEYEI--EVDGSC-NQATYEKLMAAGADVFIVGTSGLFNHAENIDEAWRIM 213 (231)
T ss_dssp ----------CTTHHHHHHHHHHHHHHHTCCCEE--EEESCC-STTTHHHHHHHTCCEEEECTTTTGGGCSSHHHHHHHH
T ss_pred ----------cHHHHHHHHHHHHHHhccCCCceE--EEECCc-CHHHHHHHHHcCCCEEEEccHHHhCCCCcHHHHHHHH
Confidence 11123333444332 24676 458999 5999999999999999999 99999989 99999999
Q ss_pred HHHHHc
Q 037779 269 VQAVTN 274 (310)
Q Consensus 269 ~~~~~~ 274 (310)
++.++.
T Consensus 214 ~~~~~~ 219 (231)
T 3ctl_A 214 TAQILA 219 (231)
T ss_dssp HHHHHC
T ss_pred HHHHHH
Confidence 887764
No 57
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=99.43 E-value=8.7e-13 Score=118.03 Aligned_cols=197 Identities=18% Similarity=0.196 Sum_probs=126.3
Q ss_pred HHHHHHHHHcCCcEEEeccccc---chhhh---------cCCCCCCCChHHHHHHHhhcCcceEeeccccc------hHH
Q 037779 45 PEQARIAEEAGACAVMALERVP---ADIRA---------QGGVARMSDPQLIKQIKSSVTIPVMAKARIGH------FVE 106 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~---~d~r~---------~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~------~~~ 106 (310)
.+.++.+.++ +++|+.-=|.. .|... ..|.......+.++++++.+++|+.+....+. .+.
T Consensus 22 ~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~~~pv~~~~~~~~~~~~~~~~~ 100 (248)
T 1geq_A 22 LNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSSTPIVLMTYYNPIYRAGVRNF 100 (248)
T ss_dssp HHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCCCCEEEEECHHHHHHHCHHHH
T ss_pred HHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhCCCCEEEEeccchhhhcCHHHH
Confidence 3679999998 99984320110 01100 01111111266888999988999877653332 357
Q ss_pred HHHHHHcCCCeeeecCC--CChhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCC-EEEEec-CCCCCchHHHHHHHH
Q 037779 107 AQILEAIGVDYVDESEV--LTPADEENHINKHNFRVPFVCGCRNLGESLRRIREGAA-MIRTKG-EAGTGNIVEAVRHVR 182 (310)
Q Consensus 107 ~~~~~~aGad~v~~~~~--~~~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad-~I~v~g-~~~~~~~~~~~~~~~ 182 (310)
++.+.++|||+|+.++. ..+.++.+.+++++....+.++.+|..|..+....++| ++.+.. ++.++.-
T Consensus 101 ~~~~~~~Gad~v~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~t~~e~~~~~~~~~d~~i~~~~~~G~~g~~-------- 172 (248)
T 1geq_A 101 LAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVIDDMTTGFVYLVSLYGTTGAR-------- 172 (248)
T ss_dssp HHHHHHHTCCEEEETTCCGGGHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHHHCSSEEEEECCC--------------
T ss_pred HHHHHHCCCCEEEECCCChhhHHHHHHHHHHhCCCeEEEECCCCHHHHHHHHHhcCCCeEEEEECCccCCCC--------
Confidence 78889999999986532 12345666666666556667777788887777766677 765431 1111110
Q ss_pred HhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCC--C
Q 037779 183 SVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSG--D 260 (310)
Q Consensus 183 ~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~--d 260 (310)
.... ....+.++.+++..++|| +++|||++++++.+++++|+|+|+|||+|+++. +
T Consensus 173 ---------~~~~-----------~~~~~~i~~l~~~~~~pi--~~~GGI~~~e~i~~~~~~Gad~vivGsai~~~~~~~ 230 (248)
T 1geq_A 173 ---------EEIP-----------KTAYDLLRRAKRICRNKV--AVGFGVSKREHVVSLLKEGANGVVVGSALVKIIGEK 230 (248)
T ss_dssp ----------CCC-----------HHHHHHHHHHHHHCSSCE--EEESCCCSHHHHHHHHHTTCSEEEECHHHHHHHHHH
T ss_pred ---------CCCC-----------hhHHHHHHHHHhhcCCCE--EEEeecCCHHHHHHHHHcCCCEEEEcHHHHhhHhhC
Confidence 0000 112567777777667899 578999988999999999999999999999863 4
Q ss_pred HHHHHHHHHHHHH
Q 037779 261 PVRRARAIVQAVT 273 (310)
Q Consensus 261 p~~~~~~~~~~~~ 273 (310)
+ +.+++|.+.+.
T Consensus 231 ~-~~~~~~~~~~~ 242 (248)
T 1geq_A 231 G-REATEFLKKKV 242 (248)
T ss_dssp G-GGCHHHHHHHH
T ss_pred h-HHHHHHHHHHH
Confidence 5 66677776664
No 58
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=99.43 E-value=5.1e-12 Score=114.66 Aligned_cols=181 Identities=16% Similarity=0.120 Sum_probs=118.6
Q ss_pred HHHHHHHHcCCcEEEeccccc-------chhhhc-----CCCCCCCChHHHHHHHhh-cCcceEeecccc------chHH
Q 037779 46 EQARIAEEAGACAVMALERVP-------ADIRAQ-----GGVARMSDPQLIKQIKSS-VTIPVMAKARIG------HFVE 106 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~-------~d~r~~-----~G~~~~~~~~~i~~i~~~-~~lPv~~kd~i~------~~~~ 106 (310)
+.++.+.++|+|+|..--|.. .-.+.. .|.....-++.++++|+. +++|+......+ ...+
T Consensus 36 ~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e~f 115 (267)
T 3vnd_A 36 KIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVFANGIDEF 115 (267)
T ss_dssp HHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHHHCHHHH
T ss_pred HHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHhhHHHH
Confidence 679999999999983321211 111111 232222236788899987 899988754332 2346
Q ss_pred HHHHHHcCCCeeeecCCCChh---HHHHHHHhcCCCCcEEee-cCCHHHHHHHHHhCCCEEEEe-cCCCCCchHHHHHHH
Q 037779 107 AQILEAIGVDYVDESEVLTPA---DEENHINKHNFRVPFVCG-CRNLGESLRRIREGAAMIRTK-GEAGTGNIVEAVRHV 181 (310)
Q Consensus 107 ~~~~~~aGad~v~~~~~~~~~---~~~~~~~~~~~~l~v~~~-v~t~~ea~~a~~~Gad~I~v~-g~~~~~~~~~~~~~~ 181 (310)
++.+.++|+|.+++++. +++ ++.+.+++++.....++. ..+.+.++...+.+.++|..- ....||.-
T Consensus 116 ~~~~~~aGvdgvii~Dl-p~ee~~~~~~~~~~~gl~~i~liaP~t~~eri~~i~~~~~gfvY~vS~~GvTG~~------- 187 (267)
T 3vnd_A 116 YTKAQAAGVDSVLIADV-PVEESAPFSKAAKAHGIAPIFIAPPNADADTLKMVSEQGEGYTYLLSRAGVTGTE------- 187 (267)
T ss_dssp HHHHHHHTCCEEEETTS-CGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCCSCEEESCCCCCC----------
T ss_pred HHHHHHcCCCEEEeCCC-CHhhHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHhCCCcEEEEecCCCCCCc-------
Confidence 78899999999987654 333 556666666666444444 445566677777777777653 22223310
Q ss_pred HHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEcccccc
Q 037779 182 RSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 182 ~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~ 257 (310)
..+ .....++++.+++..++|| +++|||++++++++.++.|||||+|||+|++
T Consensus 188 ----------~~~-----------~~~~~~~v~~vr~~~~~pv--~vGfGI~~~e~~~~~~~~gADgvVVGSaiv~ 240 (267)
T 3vnd_A 188 ----------SKA-----------GEPIENILTQLAEFNAPPP--LLGFGIAEPEQVRAAIKAGAAGAISGSAVVK 240 (267)
T ss_dssp --------------------------CHHHHHHHHHTTTCCCE--EECSSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred ----------cCC-----------cHHHHHHHHHHHHhcCCCE--EEECCcCCHHHHHHHHHcCCCEEEECHHHHH
Confidence 000 1123678888888778999 5699999999999999999999999999997
No 59
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=99.43 E-value=1.7e-11 Score=107.84 Aligned_cols=158 Identities=12% Similarity=0.093 Sum_probs=113.7
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhc-CcceEeeccccchHHHHHHHHcCCCeeeecCC
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSV-TIPVMAKARIGHFVEAQILEAIGVDYVDESEV 123 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~-~lPv~~kd~i~~~~~~~~~~~aGad~v~~~~~ 123 (310)
.+.++++.++|++.+ ++ +.+. ....+.++++++.+ ++.+.... +.+.++++.+.++|||+++.+.
T Consensus 31 ~~~~~al~~gGv~~i-el-------~~k~----~~~~~~i~~l~~~~~~~~vgagt-vi~~d~~~~A~~aGAd~v~~p~- 96 (214)
T 1wbh_A 31 VPMAKALVAGGVRVL-NV-------TLRT----ECAVDAIRAIAKEVPEAIVGAGT-VLNPQQLAEVTEAGAQFAISPG- 96 (214)
T ss_dssp HHHHHHHHHTTCCEE-EE-------ESCS----TTHHHHHHHHHHHCTTSEEEEES-CCSHHHHHHHHHHTCSCEEESS-
T ss_pred HHHHHHHHHcCCCEE-EE-------eCCC----hhHHHHHHHHHHHCcCCEEeeCE-EEEHHHHHHHHHcCCCEEEcCC-
Confidence 478999999999998 44 2211 11155677777776 34444444 3345889999999999998542
Q ss_pred CChhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhh
Q 037779 124 LTPADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFA 203 (310)
Q Consensus 124 ~~~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~ 203 (310)
...++.+..+. .+.+.+.+++|+.|+.++.+.|+||++++.. .
T Consensus 97 -~d~~v~~~~~~--~g~~~i~G~~t~~e~~~A~~~Gad~v~~Fpa-~--------------------------------- 139 (214)
T 1wbh_A 97 -LTEPLLKAATE--GTIPLIPGISTVSELMLGMDYGLKEFKFFPA-E--------------------------------- 139 (214)
T ss_dssp -CCHHHHHHHHH--SSSCEEEEESSHHHHHHHHHTTCCEEEETTT-T---------------------------------
T ss_pred -CCHHHHHHHHH--hCCCEEEecCCHHHHHHHHHCCCCEEEEecC-c---------------------------------
Confidence 23455555555 4567777899999999999999999999621 0
Q ss_pred ccCCCcHHHHHHHHhcC-CCCEEEEccCCCCCHHHHHHHHHc-CCCEEEEccccccCC
Q 037779 204 KNIAAPYDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQL-GCDGVFVGSGVFKSG 259 (310)
Q Consensus 204 ~~~~~~~~l~~~i~~~~-~iPVv~ia~GGI~t~~di~~~~~~-GadgV~VGsai~~~~ 259 (310)
.....+.++.++... ++|+ ++.||| +++++.+++++ |+++|. ||+|+.++
T Consensus 140 --~~gG~~~lk~i~~~~~~ipv--vaiGGI-~~~n~~~~l~agg~~~v~-gS~i~~~~ 191 (214)
T 1wbh_A 140 --ANGGVKALQAIAGPFSQVRF--CPTGGI-SPANYRDYLALKSVLCIG-GSWLVPAD 191 (214)
T ss_dssp --TTTHHHHHHHHHTTCTTCEE--EEBSSC-CTTTHHHHHTSTTBSCEE-EGGGSCHH
T ss_pred --cccCHHHHHHHhhhCCCCeE--EEECCC-CHHHHHHHHhcCCCeEEE-eccccChh
Confidence 001245566676654 7899 456999 59999999999 999999 99999854
No 60
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=99.42 E-value=5.3e-12 Score=114.76 Aligned_cols=179 Identities=20% Similarity=0.142 Sum_probs=118.1
Q ss_pred HHHHHHHHcCCcEEEecc-cccchhh------------hc-CCCCCCCChHHHHHHHhh-cCcceEeeccc------cch
Q 037779 46 EQARIAEEAGACAVMALE-RVPADIR------------AQ-GGVARMSDPQLIKQIKSS-VTIPVMAKARI------GHF 104 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~-~~~~d~r------------~~-~G~~~~~~~~~i~~i~~~-~~lPv~~kd~i------~~~ 104 (310)
+.++.+.++|+|.| -+. |.. |+- +. .|......++.++++|+. .++|++..... +..
T Consensus 38 ~~~~~l~~~GaD~i-ElGiPfS-DP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~ 115 (271)
T 3nav_A 38 AIMQTLIDAGADAL-ELGMPFS-DPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMYANLVYARGID 115 (271)
T ss_dssp HHHHHHHHTTCSSE-EEECCCC-CGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEECHHHHHHTCHH
T ss_pred HHHHHHHHcCCCEE-EECCCCC-CCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHhHH
Confidence 67999999999998 343 221 111 11 132222335678888887 79999875432 223
Q ss_pred HHHHHHHHcCCCeeeecCCCChh---HHHHHHHhcCCCCcEEeec-CCHHHHHHHHHhCCCEEEEe-cCCCCCchHHHHH
Q 037779 105 VEAQILEAIGVDYVDESEVLTPA---DEENHINKHNFRVPFVCGC-RNLGESLRRIREGAAMIRTK-GEAGTGNIVEAVR 179 (310)
Q Consensus 105 ~~~~~~~~aGad~v~~~~~~~~~---~~~~~~~~~~~~l~v~~~v-~t~~ea~~a~~~Gad~I~v~-g~~~~~~~~~~~~ 179 (310)
.+++.+.++|+|++++++. +++ ++.+.+++++.....++.. .+.+.++...+.+.++|..- ....||.-
T Consensus 116 ~f~~~~~~aGvdGvIipDl-p~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~~~gfiY~vs~~GvTG~~----- 189 (271)
T 3nav_A 116 DFYQRCQKAGVDSVLIADV-PTNESQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQLGKGYTYLLSRAGVTGAE----- 189 (271)
T ss_dssp HHHHHHHHHTCCEEEETTS-CGGGCHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHHCCSCEEECCCC-----------
T ss_pred HHHHHHHHCCCCEEEECCC-CHHHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHHCCCeEEEEeccCCCCcc-----
Confidence 5678999999999887654 333 4555566666664444544 44566777778888888653 22223310
Q ss_pred HHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEcccccc
Q 037779 180 HVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 180 ~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~ 257 (310)
..+. ....++++.+++..++|| ++++||++++++.+.++.|||||+|||+|++
T Consensus 190 ------------~~~~-----------~~~~~~v~~vr~~~~~Pv--~vGfGIst~e~~~~~~~~gADgvIVGSAiv~ 242 (271)
T 3nav_A 190 ------------TKAN-----------MPVHALLERLQQFDAPPA--LLGFGISEPAQVKQAIEAGAAGAISGSAVVK 242 (271)
T ss_dssp --------------CC-----------HHHHHHHHHHHHTTCCCE--EECSSCCSHHHHHHHHHTTCSEEEESHHHHH
T ss_pred ------------cCCc-----------hhHHHHHHHHHHhcCCCE--EEECCCCCHHHHHHHHHcCCCEEEECHHHHH
Confidence 0000 113567888888778999 5699999999999999999999999999997
No 61
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=99.42 E-value=8.7e-12 Score=110.50 Aligned_cols=157 Identities=14% Similarity=0.060 Sum_probs=111.6
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhc-CcceEeeccccchHHHHHHHHcCCCeeeecCC
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSV-TIPVMAKARIGHFVEAQILEAIGVDYVDESEV 123 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~-~lPv~~kd~i~~~~~~~~~~~aGad~v~~~~~ 123 (310)
.+.++++.++|++.+ ++ +.+. ....+.++++++.+ ++.+..... ...++++.+.++|||+++.+.
T Consensus 41 ~~~~~al~~gGv~~i-el-------~~k~----~~~~~~i~~l~~~~~~~~igagtv-l~~d~~~~A~~aGAd~v~~p~- 106 (225)
T 1mxs_A 41 LPLADALAAGGIRTL-EV-------TLRS----QHGLKAIQVLREQRPELCVGAGTV-LDRSMFAAVEAAGAQFVVTPG- 106 (225)
T ss_dssp HHHHHHHHHTTCCEE-EE-------ESSS----THHHHHHHHHHHHCTTSEEEEECC-CSHHHHHHHHHHTCSSEECSS-
T ss_pred HHHHHHHHHCCCCEE-EE-------ecCC----ccHHHHHHHHHHhCcccEEeeCeE-eeHHHHHHHHHCCCCEEEeCC-
Confidence 478999999999998 44 2111 01145677677665 454444443 345789999999999998442
Q ss_pred CChhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhh
Q 037779 124 LTPADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFA 203 (310)
Q Consensus 124 ~~~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~ 203 (310)
...++.+..+. .++..+.+++|+.|+..+.+.|+||++++.. .
T Consensus 107 -~d~~v~~~~~~--~g~~~i~G~~t~~e~~~A~~~Gad~vk~FPa----~------------------------------ 149 (225)
T 1mxs_A 107 -ITEDILEAGVD--SEIPLLPGISTPSEIMMGYALGYRRFKLFPA----E------------------------------ 149 (225)
T ss_dssp -CCHHHHHHHHH--CSSCEECEECSHHHHHHHHTTTCCEEEETTH----H------------------------------
T ss_pred -CCHHHHHHHHH--hCCCEEEeeCCHHHHHHHHHCCCCEEEEccC----c------------------------------
Confidence 23455555554 4567777899999999999999999999520 0
Q ss_pred ccCCCcHHHHHHHHhcC-CCCEEEEccCCCCCHHHHHHHHH-cCCCEEEEccccccC
Q 037779 204 KNIAAPYDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQ-LGCDGVFVGSGVFKS 258 (310)
Q Consensus 204 ~~~~~~~~l~~~i~~~~-~iPVv~ia~GGI~t~~di~~~~~-~GadgV~VGsai~~~ 258 (310)
.. ...+.++.++... ++|++ +.||| +++++.++++ .|+++|. ||+|+.+
T Consensus 150 -~~-~G~~~lk~i~~~~~~ipvv--aiGGI-~~~N~~~~l~~~Ga~~v~-gSai~~~ 200 (225)
T 1mxs_A 150 -IS-GGVAAIKAFGGPFGDIRFC--PTGGV-NPANVRNYMALPNVMCVG-TTWMLDS 200 (225)
T ss_dssp -HH-THHHHHHHHHTTTTTCEEE--EBSSC-CTTTHHHHHHSTTBCCEE-ECTTSCH
T ss_pred -cc-cCHHHHHHHHhhCCCCeEE--EECCC-CHHHHHHHHhccCCEEEE-EchhcCc
Confidence 00 0234566666644 78994 56999 6999999999 6999999 9999984
No 62
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=99.41 E-value=4.2e-12 Score=110.43 Aligned_cols=177 Identities=20% Similarity=0.188 Sum_probs=113.5
Q ss_pred HHHHHHHHcCCcEEEecccccchhh--hcCCCCCCCChHHHHHHHhhc-CcceEeeccccc-hH-HHHHHHHcCCCeeee
Q 037779 46 EQARIAEEAGACAVMALERVPADIR--AQGGVARMSDPQLIKQIKSSV-TIPVMAKARIGH-FV-EAQILEAIGVDYVDE 120 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r--~~~G~~~~~~~~~i~~i~~~~-~lPv~~kd~i~~-~~-~~~~~~~aGad~v~~ 120 (310)
+.++.+.+ |++++- + .+.. .++ ++.++++++.+ +.|+.+..++.+ .+ .++.+.++|||+++.
T Consensus 17 ~~~~~~~~-~v~~ie-v----~~~~~~~~g-------~~~i~~l~~~~~~~~i~~~l~~~di~~~~~~~a~~~Gad~v~v 83 (207)
T 3ajx_A 17 ELAGKVAE-YVDIIE-L----GTPLIKAEG-------LSVITAVKKAHPDKIVFADMKTMDAGELEADIAFKAGADLVTV 83 (207)
T ss_dssp HHHHHHGG-GCSEEE-E----CHHHHHHHC-------THHHHHHHHHSTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHhhc-cCCEEE-E----CcHHHHhhC-------HHHHHHHHHhCCCCeEEEEEEecCccHHHHHHHHhCCCCEEEE
Confidence 44566655 778873 3 1221 233 67899999887 889887544433 23 467888999999975
Q ss_pred cCCCC---hhHHHHHHHhcCCCCcEEeecC---CHHH-HHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccc
Q 037779 121 SEVLT---PADEENHINKHNFRVPFVCGCR---NLGE-SLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRN 193 (310)
Q Consensus 121 ~~~~~---~~~~~~~~~~~~~~l~v~~~v~---t~~e-a~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~ 193 (310)
+.... ..++.+.++++ ++.++++++ |+.+ +..+.+.|+|++++.. ..++. ...
T Consensus 84 h~~~~~~~~~~~~~~~~~~--g~~~gv~~~s~~~p~~~~~~~~~~g~d~v~~~~-~~~~~-----------------~~g 143 (207)
T 3ajx_A 84 LGSADDSTIAGAVKAAQAH--NKGVVVDLIGIEDKATRAQEVRALGAKFVEMHA-GLDEQ-----------------AKP 143 (207)
T ss_dssp ETTSCHHHHHHHHHHHHHH--TCEEEEECTTCSSHHHHHHHHHHTTCSEEEEEC-CHHHH-----------------TST
T ss_pred eccCChHHHHHHHHHHHHc--CCceEEEEecCCChHHHHHHHHHhCCCEEEEEe-ccccc-----------------ccC
Confidence 43322 23344555443 444555554 6666 5555677999996641 11100 000
Q ss_pred cCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHH
Q 037779 194 MDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQA 271 (310)
Q Consensus 194 ~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~ 271 (310)
. . ... +.++.+.+. ++|++ +.|||+ ++++.+++++|||+|+|||+|++++||.+.+++|++.
T Consensus 144 ~----------~-~~~-~~i~~~~~~-~~pi~--v~GGI~-~~~~~~~~~aGad~vvvGsaI~~~~dp~~~~~~~~~~ 205 (207)
T 3ajx_A 144 G----------F-DLN-GLLAAGEKA-RVPFS--VAGGVK-VATIPAVQKAGAEVAVAGGAIYGAADPAAAAKELRAA 205 (207)
T ss_dssp T----------C-CTH-HHHHHHHHH-TSCEE--EESSCC-GGGHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHT
T ss_pred C----------C-chH-HHHHHhhCC-CCCEE--EECCcC-HHHHHHHHHcCCCEEEEeeeccCCCCHHHHHHHHHHH
Confidence 0 0 011 334444332 57984 579995 9999999999999999999999999999999998764
No 63
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=99.40 E-value=1.9e-11 Score=115.64 Aligned_cols=185 Identities=15% Similarity=0.198 Sum_probs=122.1
Q ss_pred CccccCCCHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCC
Q 037779 37 GVIMDVVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVD 116 (310)
Q Consensus 37 g~i~~~~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad 116 (310)
+.|....++++|.++.+.|.-.+... ..+.+. ..+.++++++..++|+.++......+.++.+.++|+|
T Consensus 51 apM~~vt~~~lA~avA~~GGlgii~~-~~s~e~----------~~~~I~~vk~~~~~pvga~ig~~~~e~a~~l~eaGad 119 (361)
T 3khj_A 51 SAMDTVTEHLMAVGMARLGGIGIIHK-NMDMES----------QVNEVLKVKNSGGLRVGAAIGVNEIERAKLLVEAGVD 119 (361)
T ss_dssp CSSTTTCSHHHHHHHHHTTCEEEECS-SSCHHH----------HHHHHHHHHHTTCCCCEEEECTTCHHHHHHHHHTTCS
T ss_pred ecCCCCCcHHHHHHHHHcCCCeEEec-CCCHHH----------HHHHHHHHHhccCceEEEEeCCCHHHHHHHHHHcCcC
Confidence 34455667899998777666654221 111111 1456777777778999888766555778899999999
Q ss_pred eeeec-CCCChhH---HHHHHHhcCCCCcEEe-ecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecc
Q 037779 117 YVDES-EVLTPAD---EENHINKHNFRVPFVC-GCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVL 191 (310)
Q Consensus 117 ~v~~~-~~~~~~~---~~~~~~~~~~~l~v~~-~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l 191 (310)
.|++. ....+.. .++.+++. .++++++ .+.|.++++.+.+.|+|+|.+....++...- +.+
T Consensus 120 ~I~ld~a~G~~~~~~~~i~~i~~~-~~~~Vivg~v~t~e~A~~l~~aGaD~I~VG~~~Gs~~~t-------------r~~ 185 (361)
T 3khj_A 120 VIVLDSAHGHSLNIIRTLKEIKSK-MNIDVIVGNVVTEEATKELIENGADGIKVGIGPGSICTT-------------RIV 185 (361)
T ss_dssp EEEECCSCCSBHHHHHHHHHHHHH-CCCEEEEEEECSHHHHHHHHHTTCSEEEECSSCCTTCCH-------------HHH
T ss_pred eEEEeCCCCCcHHHHHHHHHHHHh-cCCcEEEccCCCHHHHHHHHHcCcCEEEEecCCCcCCCc-------------ccc
Confidence 98742 2223333 34444443 3788886 7899999999999999999984111110000 000
Q ss_pred cccCchhHHhhhccC-CCcHHHHHHHHh---cCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCC
Q 037779 192 RNMDDDEVFTFAKNI-AAPYDLVMQTKQ---LGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGD 260 (310)
Q Consensus 192 ~~~~~d~~~~~~~~~-~~~~~l~~~i~~---~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~d 260 (310)
. +. .+....+..+.+ ..++|| |++|||.+++|+.+++++||++|++||+|+.+++
T Consensus 186 ~------------g~g~p~~~~i~~v~~~~~~~~iPV--IA~GGI~~~~di~kala~GAd~V~vGs~~~~t~E 244 (361)
T 3khj_A 186 A------------GVGVPQITAIEKCSSVASKFGIPI--IADGGIRYSGDIGKALAVGASSVMIGSILAGTEE 244 (361)
T ss_dssp T------------CBCCCHHHHHHHHHHHHHHHTCCE--EEESCCCSHHHHHHHHHHTCSEEEESTTTTTBTT
T ss_pred c------------CCCCCcHHHHHHHHHHHhhcCCeE--EEECCCCCHHHHHHHHHcCCCEEEEChhhhcCCc
Confidence 0 11 123444455433 246899 6789999999999999999999999999999764
No 64
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=99.38 E-value=9.4e-12 Score=112.91 Aligned_cols=182 Identities=20% Similarity=0.258 Sum_probs=119.3
Q ss_pred CccccCCCH-HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHh--hcCcceEeeccccc----------
Q 037779 37 GVIMDVVTP-EQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKS--SVTIPVMAKARIGH---------- 103 (310)
Q Consensus 37 g~i~~~~~~-~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~--~~~lPv~~kd~i~~---------- 103 (310)
|.+....++ ++++.+.+.|+++|... . ..++.+++ ..++|++++..-+.
T Consensus 39 ~p~~~~~~~~~~~~~~~~~g~~~i~~~------~------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~ 100 (273)
T 2qjg_A 39 GPIKGLIDIRKTVNDVAEGGANAVLLH------K------------GIVRHGHRGYGKDVGLIIHLSGGTAISPNPLKKV 100 (273)
T ss_dssp CSCTTSSSHHHHHHHHHHHTCSEEEEC------H------------HHHHSCCCSSSCCCEEEEECEECCTTSSSTTCCE
T ss_pred CCCcchhhHHHHHHHHHhcCCCEEEeC------H------------HHHHHHHHhhcCCCCEEEEEcCCCcCCCCcccch
Confidence 445555565 68999999999998421 1 11111111 12456665422111
Q ss_pred -hHHHHHHHHcCCCee--e-ecCCCChhH-------HHHHHHhcCCCCcEEeec----------CCH---HHH-HHHHHh
Q 037779 104 -FVEAQILEAIGVDYV--D-ESEVLTPAD-------EENHINKHNFRVPFVCGC----------RNL---GES-LRRIRE 158 (310)
Q Consensus 104 -~~~~~~~~~aGad~v--~-~~~~~~~~~-------~~~~~~~~~~~l~v~~~v----------~t~---~ea-~~a~~~ 158 (310)
.+.++.+.++|++.| . .....+..+ +.+.+++ .++++++.+ .+. +++ +.+.+.
T Consensus 101 ~~~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~--~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~ 178 (273)
T 2qjg_A 101 IVTTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEY--WGMPLIAMMYPRGKHIQNERDPELVAHAARLGAEL 178 (273)
T ss_dssp ECSCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHH--HTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHH--cCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHc
Confidence 356778889999999 3 222223222 2333332 355555544 333 455 677789
Q ss_pred CCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCC--HH
Q 037779 159 GAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVAT--PA 236 (310)
Q Consensus 159 Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t--~~ 236 (310)
|+|+|+++. + .+++.++.+.+..++|| ++.|||++ .+
T Consensus 179 Gad~i~~~~---~------------------------------------~~~~~l~~i~~~~~ipv--va~GGi~~~~~~ 217 (273)
T 2qjg_A 179 GADIVKTSY---T------------------------------------GDIDSFRDVVKGCPAPV--VVAGGPKTNTDE 217 (273)
T ss_dssp TCSEEEECC---C------------------------------------SSHHHHHHHHHHCSSCE--EEECCSCCSSHH
T ss_pred CCCEEEECC---C------------------------------------CCHHHHHHHHHhCCCCE--EEEeCCCCCCHH
Confidence 999999861 0 13556666666567899 56899984 66
Q ss_pred H----HHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHcCCChh
Q 037779 237 D----AAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTNYSDPD 279 (310)
Q Consensus 237 d----i~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~~~~~~ 279 (310)
+ +.+++++|++||++||+|++++||.+.+++|.+.++....+.
T Consensus 218 ~~~~~~~~~~~~Ga~gv~vg~~i~~~~~~~~~~~~l~~~~~~~~~~~ 264 (273)
T 2qjg_A 218 EFLQMIKDAMEAGAAGVAVGRNIFQHDDVVGITRAVCKIVHENADVE 264 (273)
T ss_dssp HHHHHHHHHHHHTCSEEECCHHHHTSSSHHHHHHHHHHHHHHCCCHH
T ss_pred HHHHHHHHHHHcCCcEEEeeHHhhCCCCHHHHHHHHHHHHhcCCCHH
Confidence 6 777778999999999999999999999999999998776543
No 65
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=99.37 E-value=2.8e-11 Score=109.88 Aligned_cols=198 Identities=20% Similarity=0.161 Sum_probs=123.2
Q ss_pred HHHHHHHHHcCCcEEEecccccchhh------------h-cCCCCCCCChHHHHHHHhh-cCcceEeeccc------cch
Q 037779 45 PEQARIAEEAGACAVMALERVPADIR------------A-QGGVARMSDPQLIKQIKSS-VTIPVMAKARI------GHF 104 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r------------~-~~G~~~~~~~~~i~~i~~~-~~lPv~~kd~i------~~~ 104 (310)
.+.++.+.++|+|+|..--|.. |+. . .+|......++.++++++. +++|+.+.... +..
T Consensus 34 ~~~~~~l~~~GaD~ieig~P~s-dp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y~n~v~~~g~~ 112 (268)
T 1qop_A 34 LKIIDTLIDAGADALELGVPFS-DPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMYANLVFNNGID 112 (268)
T ss_dssp HHHHHHHHHTTCSSEEEECCCS-CCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEECHHHHHTTCHH
T ss_pred HHHHHHHHHCCCCEEEECCCCC-CccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEEcccHHHHhhHH
Confidence 3679999999999984321221 110 0 0121111124678999998 89998763211 123
Q ss_pred HHHHHHHHcCCCeeeecCCC--ChhHHHHHHHhcCCCC-cEEeecCCHHHHHHHHHhCCCEEEEecC-CCCCchHHHHHH
Q 037779 105 VEAQILEAIGVDYVDESEVL--TPADEENHINKHNFRV-PFVCGCRNLGESLRRIREGAAMIRTKGE-AGTGNIVEAVRH 180 (310)
Q Consensus 105 ~~~~~~~~aGad~v~~~~~~--~~~~~~~~~~~~~~~l-~v~~~v~t~~ea~~a~~~Gad~I~v~g~-~~~~~~~~~~~~ 180 (310)
.+++.+.++|+|+++.++.. ...++.+.+++++... .++....+.+.++...+.+..++.+... ++||..
T Consensus 113 ~~~~~~~~aGadgii~~d~~~e~~~~~~~~~~~~g~~~i~l~~p~t~~~~i~~i~~~~~g~v~~~s~~G~tG~~------ 186 (268)
T 1qop_A 113 AFYARCEQVGVDSVLVADVPVEESAPFRQAALRHNIAPIFICPPNADDDLLRQVASYGRGYTYLLSRSGVTGAE------ 186 (268)
T ss_dssp HHHHHHHHHTCCEEEETTCCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCCSCEEEESSSSCCCSS------
T ss_pred HHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHhhCCCcEEEEecCCcCCCc------
Confidence 56788899999998866542 2345666666666553 3333445556666666666656643221 233310
Q ss_pred HHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccC--
Q 037779 181 VRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKS-- 258 (310)
Q Consensus 181 ~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~-- 258 (310)
.. ......++++.+++..++|| +++|||+|++++.+++..|||+|+|||+|++.
T Consensus 187 -----------~~-----------~~~~~~~~i~~lr~~~~~pi--~vggGI~t~e~~~~~~~agAD~vVVGSai~~~~~ 242 (268)
T 1qop_A 187 -----------NR-----------GALPLHHLIEKLKEYHAAPA--LQGFGISSPEQVSAAVRAGAAGAISGSAIVKIIE 242 (268)
T ss_dssp -----------SC-----------C--CCHHHHHHHHHTTCCCE--EEESSCCSHHHHHHHHHTTCSEEEECHHHHHHHH
T ss_pred -----------cC-----------CCchHHHHHHHHHhccCCcE--EEECCCCCHHHHHHHHHcCCCEEEEChHHhhhHh
Confidence 00 01224678888888778898 56999999999999999999999999999875
Q ss_pred ---CCHH---HHHHHHHHHHH
Q 037779 259 ---GDPV---RRARAIVQAVT 273 (310)
Q Consensus 259 ---~dp~---~~~~~~~~~~~ 273 (310)
.+|. +.+++|.+.+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~l~ 263 (268)
T 1qop_A 243 KNLASPKQMLAELRSFVSAMK 263 (268)
T ss_dssp HTTTCHHHHHHHHHHHHHHHH
T ss_pred hcccCchHHHHHHHHHHHHHH
Confidence 2323 34555655554
No 66
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=99.37 E-value=1.2e-11 Score=109.65 Aligned_cols=187 Identities=15% Similarity=0.171 Sum_probs=122.0
Q ss_pred HHHHHHHHHcCCcEEE-e---cccccchhhhcCCCCCCCChHHHHHHHhhc-CcceEeeccccchHHH-HHHHHcCCCee
Q 037779 45 PEQARIAEEAGACAVM-A---LERVPADIRAQGGVARMSDPQLIKQIKSSV-TIPVMAKARIGHFVEA-QILEAIGVDYV 118 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~-~---l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~-~lPv~~kd~i~~~~~~-~~~~~aGad~v 118 (310)
.+.++.++++|+++++ + .+++|. . .|+ +..++++|+.+ +.|+.+.-.+.+.+.+ +.+.. ||.+
T Consensus 21 ~~~i~~~~~~g~d~iHvDvmDg~fvpn-~-t~G-------~~~v~~lr~~~p~~~~dvhLmv~dp~~~i~~~~~--Ad~i 89 (227)
T 1tqx_A 21 AEETQRMESLGAEWIHLDVMDMHFVPN-L-SFG-------PPVINNLKKYTKSIFFDVHLMVEYPEKYVPLLKT--SNQL 89 (227)
T ss_dssp HHHHHHHHHTTCSEEEEEEEBSSSSSC-B-CCC-------HHHHHHHGGGCSSCEEEEEEESSCGGGGGGGCTT--SSEE
T ss_pred HHHHHHHHHcCCCEEEEEEEeCCcCcc-h-hcC-------HHHHHHHHHhCCCCcEEEEEEEcCHHHHHHHHHh--CCEE
Confidence 3778899999999973 1 123331 1 333 78999999998 8999888777643322 22222 8887
Q ss_pred eec--CCC-ChhHHHH---HHHhcCCCCcEEeecCCHHHHHHHH-Hh-CCCEEEEe--cCCCCCchHHHHHHHHHhhcce
Q 037779 119 DES--EVL-TPADEEN---HINKHNFRVPFVCGCRNLGESLRRI-RE-GAAMIRTK--GEAGTGNIVEAVRHVRSVMGDI 188 (310)
Q Consensus 119 ~~~--~~~-~~~~~~~---~~~~~~~~l~v~~~v~t~~ea~~a~-~~-Gad~I~v~--g~~~~~~~~~~~~~~~~~~~~~ 188 (310)
..+ ... .+...++ .+++.+....+.+..+|+.+..+.. +. .+|+|.+. .+++++-
T Consensus 90 tvH~ea~~~~~~~~i~~~~~i~~~G~k~gvalnp~tp~~~~~~~l~~g~~D~VlvmsV~pGf~gq--------------- 154 (227)
T 1tqx_A 90 TFHFEALNEDTERCIQLAKEIRDNNLWCGISIKPKTDVQKLVPILDTNLINTVLVMTVEPGFGGQ--------------- 154 (227)
T ss_dssp EEEGGGGTTCHHHHHHHHHHHHTTTCEEEEEECTTSCGGGGHHHHTTTCCSEEEEESSCTTCSSC---------------
T ss_pred EEeecCCccCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHhhcCCcCEEEEeeeccCCCCc---------------
Confidence 522 222 4566777 6665443333333445665554444 44 49999543 2333321
Q ss_pred ecccccCchhHHhhhccCCCcHHHHHHHHhcC-CCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHH
Q 037779 189 RVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARA 267 (310)
Q Consensus 189 ~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~-~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~ 267 (310)
.+ .....+.++++++.. ++++ .+.||| +++++.++.++|||.+++||+|++++||.+.+++
T Consensus 155 ----~f-----------~~~~l~ki~~lr~~~~~~~I--~VdGGI-~~~ti~~~~~aGAd~~V~GsaIf~~~d~~~~i~~ 216 (227)
T 1tqx_A 155 ----SF-----------MHDMMGKVSFLRKKYKNLNI--QVDGGL-NIETTEISASHGANIIVAGTSIFNAEDPKYVIDT 216 (227)
T ss_dssp ----CC-----------CGGGHHHHHHHHHHCTTCEE--EEESSC-CHHHHHHHHHHTCCEEEESHHHHTCSSHHHHHHH
T ss_pred ----cc-----------chHHHHHHHHHHHhccCCeE--EEECCC-CHHHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHH
Confidence 00 112345555565543 5677 457999 5999999999999999999999999999999999
Q ss_pred HHHHHHcC
Q 037779 268 IVQAVTNY 275 (310)
Q Consensus 268 ~~~~~~~~ 275 (310)
|++.++..
T Consensus 217 l~~~~~~~ 224 (227)
T 1tqx_A 217 MRVSVQKY 224 (227)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHH
Confidence 98877643
No 67
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=99.34 E-value=2.1e-11 Score=110.46 Aligned_cols=197 Identities=15% Similarity=0.119 Sum_probs=121.7
Q ss_pred HHHHHHHHHcCCcEEEecc-cccchhh------------h-cCCCCCCCChHHHHHHHhhc-CcceEeecccc------c
Q 037779 45 PEQARIAEEAGACAVMALE-RVPADIR------------A-QGGVARMSDPQLIKQIKSSV-TIPVMAKARIG------H 103 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~-~~~~d~r------------~-~~G~~~~~~~~~i~~i~~~~-~lPv~~kd~i~------~ 103 (310)
.+.++.+.++|+|+| .+. |.. |+. . ..|.....-++.++++++.+ ++|+.+....+ .
T Consensus 34 ~~~~~~l~~~G~D~I-ElG~P~s-dP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~m~y~n~v~~~g~ 111 (262)
T 2ekc_A 34 LKAFKEVLKNGTDIL-EIGFPFS-DPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLLMTYYNPIFRIGL 111 (262)
T ss_dssp HHHHHHHHHTTCSEE-EEECCCS-CCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEECCHHHHHHHCH
T ss_pred HHHHHHHHHcCCCEE-EECCCCC-CcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEEEecCcHHHHhhH
Confidence 367999999999998 343 321 110 0 11221111246788999888 99998842221 1
Q ss_pred hHHHHHHHHcCCCeeeecCCCChhH---HHHHHHhcCCCCcEEe-ecCCHHHHHHHHHhCCCEEEEecC-CCCCchHHHH
Q 037779 104 FVEAQILEAIGVDYVDESEVLTPAD---EENHINKHNFRVPFVC-GCRNLGESLRRIREGAAMIRTKGE-AGTGNIVEAV 178 (310)
Q Consensus 104 ~~~~~~~~~aGad~v~~~~~~~~~~---~~~~~~~~~~~l~v~~-~v~t~~ea~~a~~~Gad~I~v~g~-~~~~~~~~~~ 178 (310)
..+++.+.++|+|+++.++. ++++ +.+.+++++..+..++ ..++.+.+....+.+..++...+. ..+|..
T Consensus 112 ~~f~~~~~~aG~dgvii~dl-~~ee~~~~~~~~~~~gl~~i~l~~p~t~~~rl~~ia~~a~gfiy~vs~~g~TG~~---- 186 (262)
T 2ekc_A 112 EKFCRLSREKGIDGFIVPDL-PPEEAEELKAVMKKYVLSFVPLGAPTSTRKRIKLICEAADEMTYFVSVTGTTGAR---- 186 (262)
T ss_dssp HHHHHHHHHTTCCEEECTTC-CHHHHHHHHHHHHHTTCEECCEECTTCCHHHHHHHHHHCSSCEEEESSCC---------
T ss_pred HHHHHHHHHcCCCEEEECCC-CHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhCCCCEEEEecCCccCCC----
Confidence 24567888999999987654 3443 3444555655533333 344555566666665556543222 122210
Q ss_pred HHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccC
Q 037779 179 RHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKS 258 (310)
Q Consensus 179 ~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~ 258 (310)
.. .......++++.+++..++|| +++|||++++++.+ +..|||+|+|||+|++.
T Consensus 187 ----------------~~-------~~~~~~~~~v~~vr~~~~~pv--~vG~GI~t~e~~~~-~~~gADgvIVGSai~~~ 240 (262)
T 2ekc_A 187 ----------------EK-------LPYERIKKKVEEYRELCDKPV--VVGFGVSKKEHARE-IGSFADGVVVGSALVKL 240 (262)
T ss_dssp ---------------------------CHHHHHHHHHHHHHCCSCE--EEESSCCSHHHHHH-HHTTSSEEEECHHHHHH
T ss_pred ----------------CC-------cCcccHHHHHHHHHhhcCCCE--EEeCCCCCHHHHHH-HHcCCCEEEECHHHHhh
Confidence 00 000112467788887778898 56999999999999 78889999999999987
Q ss_pred --CCHHHHHHHHHHHHHc
Q 037779 259 --GDPVRRARAIVQAVTN 274 (310)
Q Consensus 259 --~dp~~~~~~~~~~~~~ 274 (310)
+++.+.+++|.+.++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~ 258 (262)
T 2ekc_A 241 AGQKKIEDLGNLVKELKE 258 (262)
T ss_dssp HHTTCHHHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHHHHHHH
Confidence 5566777888777753
No 68
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=99.33 E-value=3.7e-11 Score=105.24 Aligned_cols=173 Identities=11% Similarity=0.101 Sum_probs=122.3
Q ss_pred ccceeeecCCccccCCCHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHH
Q 037779 28 VGLAQMLRGGVIMDVVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEA 107 (310)
Q Consensus 28 ~~~~~~l~~g~i~~~~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~ 107 (310)
.|+...+|+-...+ -..+++++.++|+..+ -+ .... ..-.+.|+++++.+.-+++.-.-+.+.+++
T Consensus 13 ~~vi~Vir~~~~~~--a~~~a~al~~gGi~~i-Ev-------t~~t----~~a~~~I~~l~~~~p~~~IGAGTVlt~~~a 78 (217)
T 3lab_A 13 KPLIPVIVIDDLVH--AIPMAKALVAGGVHLL-EV-------TLRT----EAGLAAISAIKKAVPEAIVGAGTVCTADDF 78 (217)
T ss_dssp CSEEEEECCSCGGG--HHHHHHHHHHTTCCEE-EE-------ETTS----TTHHHHHHHHHHHCTTSEEEEECCCSHHHH
T ss_pred CCEEEEEEcCCHHH--HHHHHHHHHHcCCCEE-EE-------eCCC----ccHHHHHHHHHHHCCCCeEeeccccCHHHH
Confidence 45666666611110 1478999999999987 22 1100 111678888888774444433334466889
Q ss_pred HHHHHcCCCeeeecCCCChhHHHHHHHhcCCCC------cEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHH
Q 037779 108 QILEAIGVDYVDESEVLTPADEENHINKHNFRV------PFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHV 181 (310)
Q Consensus 108 ~~~~~aGad~v~~~~~~~~~~~~~~~~~~~~~l------~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~ 181 (310)
+.+.++||+++..+.. .+++++..+++ ++ +++.++.|+.|+.++.++|+|+++++....
T Consensus 79 ~~ai~AGA~fivsP~~--~~evi~~~~~~--~v~~~~~~~~~PG~~TptE~~~A~~~Gad~vK~FPa~~----------- 143 (217)
T 3lab_A 79 QKAIDAGAQFIVSPGL--TPELIEKAKQV--KLDGQWQGVFLPGVATASEVMIAAQAGITQLKCFPASA----------- 143 (217)
T ss_dssp HHHHHHTCSEEEESSC--CHHHHHHHHHH--HHHCSCCCEEEEEECSHHHHHHHHHTTCCEEEETTTTT-----------
T ss_pred HHHHHcCCCEEEeCCC--cHHHHHHHHHc--CCCccCCCeEeCCCCCHHHHHHHHHcCCCEEEECcccc-----------
Confidence 9999999999976543 45677777663 57 899999999999999999999999862110
Q ss_pred HHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhc-CCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEcccccc
Q 037779 182 RSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQL-GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 182 ~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~-~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~ 257 (310)
....++++.++.- .++|+ ++.|||+ ++++.+++++|+..++.||.++.
T Consensus 144 -------------------------~gG~~~lkal~~p~p~i~~--~ptGGI~-~~N~~~~l~aGa~~~vgGs~l~~ 192 (217)
T 3lab_A 144 -------------------------IGGAKLLKAWSGPFPDIQF--CPTGGIS-KDNYKEYLGLPNVICAGGSWLTE 192 (217)
T ss_dssp -------------------------TTHHHHHHHHHTTCTTCEE--EEBSSCC-TTTHHHHHHSTTBCCEEESGGGC
T ss_pred -------------------------ccCHHHHHHHHhhhcCceE--EEeCCCC-HHHHHHHHHCCCEEEEEChhhcC
Confidence 0023556666653 36788 6789995 99999999999999999998885
No 69
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=99.32 E-value=1.5e-10 Score=109.38 Aligned_cols=186 Identities=15% Similarity=0.159 Sum_probs=118.6
Q ss_pred CccccCCCHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccc--cchHHHHHHHHcC
Q 037779 37 GVIMDVVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARI--GHFVEAQILEAIG 114 (310)
Q Consensus 37 g~i~~~~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i--~~~~~~~~~~~aG 114 (310)
+.|..+.++++|.++.++|.-.+... ..+.+. ..+.++++++...+++.+.... ...+.++.+.++|
T Consensus 52 apM~~vs~~~lA~avA~aGGlg~i~~-~~s~e~----------~~~~i~~vk~~~~l~vga~vg~~~~~~~~~~~lieaG 120 (366)
T 4fo4_A 52 ASMDTVTEARLAIALAQEGGIGFIHK-NMSIEQ----------QAAQVHQVKISGGLRVGAAVGAAPGNEERVKALVEAG 120 (366)
T ss_dssp CCCTTTCSHHHHHHHHHTTCEEEECS-SSCHHH----------HHHHHHHHHTTTSCCCEEECCSCTTCHHHHHHHHHTT
T ss_pred CCCCCCChHHHHHHHHHcCCceEeec-CCCHHH----------HHHHHHHHHhcCceeEEEEeccChhHHHHHHHHHhCC
Confidence 44556677899988888877665221 111111 0345666665544444433222 2347788999999
Q ss_pred CCeeee-cCCCChhH---HHHHHHhcCCCCcEEe-ecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhccee
Q 037779 115 VDYVDE-SEVLTPAD---EENHINKHNFRVPFVC-GCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIR 189 (310)
Q Consensus 115 ad~v~~-~~~~~~~~---~~~~~~~~~~~l~v~~-~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~ 189 (310)
+|.|.+ +....+.. .++.++++.+++++++ .+.|.++++.+.++|+|+|.+. ...+++. .+ +
T Consensus 121 vd~I~idta~G~~~~~~~~I~~ik~~~p~v~Vi~G~v~t~e~A~~a~~aGAD~I~vG-~gpGs~~-~t-----------r 187 (366)
T 4fo4_A 121 VDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVG-IGPGSIC-TT-----------R 187 (366)
T ss_dssp CSEEEEECSCTTSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEEC-SSCSTTB-CH-----------H
T ss_pred CCEEEEeCCCCCCHHHHHHHHHHHHhcCCCceEeeeeCCHHHHHHHHHcCCCEEEEe-cCCCCCC-Cc-----------c
Confidence 999874 22222333 3455665555777766 5899999999999999999983 2111110 00 0
Q ss_pred cccccCchhHHhhhccCC-CcHHHHHHHHh---cCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCC
Q 037779 190 VLRNMDDDEVFTFAKNIA-APYDLVMQTKQ---LGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGD 260 (310)
Q Consensus 190 ~l~~~~~d~~~~~~~~~~-~~~~l~~~i~~---~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~d 260 (310)
... +.. +....+..+.+ ..++|| |++|||.++.++.+++++||++|++||+|+.++.
T Consensus 188 ~~~------------g~g~p~~~~l~~v~~~~~~~~iPV--IA~GGI~~~~di~kala~GAd~V~vGs~f~~t~E 248 (366)
T 4fo4_A 188 IVT------------GVGVPQITAIADAAGVANEYGIPV--IADGGIRFSGDISKAIAAGASCVMVGSMFAGTEE 248 (366)
T ss_dssp HHH------------CCCCCHHHHHHHHHHHHGGGTCCE--EEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTT
T ss_pred ccc------------CcccchHHHHHHHHHHHhhcCCeE--EEeCCCCCHHHHHHHHHcCCCEEEEChHhhcCCC
Confidence 000 111 23445555543 347999 6789999999999999999999999999998754
No 70
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=99.29 E-value=1.4e-11 Score=109.96 Aligned_cols=182 Identities=14% Similarity=0.030 Sum_probs=115.5
Q ss_pred HHHHHHHHHcCCcEEEe-c---ccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccc-hHHHHHHHHcCCCeee
Q 037779 45 PEQARIAEEAGACAVMA-L---ERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGH-FVEAQILEAIGVDYVD 119 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~-l---~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~-~~~~~~~~~aGad~v~ 119 (310)
.+.++.+.++|+++++. . +++|. . .|+ +..++++|+.+.. -++..+.+ ...++.+.++|||.+.
T Consensus 29 ~~~i~~~~~~gad~lhvDvmDG~fvpn-~-t~G-------~~~v~~lr~~~~~--DvhLMv~~p~~~i~~~~~aGAd~it 97 (237)
T 3cu2_A 29 NEEVTTLLENQINVLHFDIADGQFSSL-F-TVG-------AIGIKYFPTHCFK--DVHLMVRNQLEVAKAVVANGANLVT 97 (237)
T ss_dssp HHHHHHHHHTTCCEEEEEEEBSSSSSC-B-CBC-------THHHHTSCTTSEE--EEEEECSCHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHcCCCEEEEEEecCccccc-h-hhh-------HHHHHHHhhhCCC--CeEEEEECHHHHHHHHHHcCCCEEE
Confidence 36789999999999732 1 12221 1 222 5788888887643 33333332 2356889999999965
Q ss_pred ec--CCCChhHHHHHHHhcCC-------CCcEEee--cCCHHHHHHHHHhCCCEEEEe--cCCCCCchHHHHHHHHHhhc
Q 037779 120 ES--EVLTPADEENHINKHNF-------RVPFVCG--CRNLGESLRRIREGAAMIRTK--GEAGTGNIVEAVRHVRSVMG 186 (310)
Q Consensus 120 ~~--~~~~~~~~~~~~~~~~~-------~l~v~~~--v~t~~ea~~a~~~Gad~I~v~--g~~~~~~~~~~~~~~~~~~~ 186 (310)
.+ ....+.+.++.+++++. ++.+++. .+|+.+..+....++|+|.+. ++.+++-
T Consensus 98 vH~ea~~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp~~~l~~~l~~~D~vlvMsv~pgfggq------------- 164 (237)
T 3cu2_A 98 LQLEQYHDFALTIEWLAKQKTTYANQVYPVLIGACLCPETPISELEPYLDQIDVIQLLTLDPRNGTK------------- 164 (237)
T ss_dssp EETTCTTSHHHHHHHHTTCEEEETTEEEECEEEEEECTTSCGGGGTTTTTTCSEEEEESEETTTTEE-------------
T ss_pred EecCCcccHHHHHHHHHhcccccccccCCceEEEEEeCCChHHHHHHHhhcCceeeeeeeccCcCCe-------------
Confidence 33 22235566666655300 4555554 467777666666689998652 3444331
Q ss_pred ceecccccCchhHHhhhccCCCcHHHHHHHHhcC-----CCCEEEEccCCCCCHHHHHHHHH--cCCCEEEEccccccCC
Q 037779 187 DIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLG-----RLPVVHFAAGGVATPADAAMMMQ--LGCDGVFVGSGVFKSG 259 (310)
Q Consensus 187 ~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~-----~iPVv~ia~GGI~t~~di~~~~~--~GadgV~VGsai~~~~ 259 (310)
.+. ....+.++++++.. ++|+ .+.||| +++++.++.+ +|||++++||+|+++
T Consensus 165 ------~f~-----------~~~l~ki~~lr~~~~~~~~~~~I--~vdGGI-~~~~~~~~~~~~aGad~~VvGSaIf~~- 223 (237)
T 3cu2_A 165 ------YPS-----------ELILDRVIQVEKRLGNRRVEKLI--NIDGSM-TLELAKYFKQGTHQIDWLVSGSALFSG- 223 (237)
T ss_dssp ------CCH-----------HHHHHHHHHHHHHHGGGGGGCEE--EEESSC-CHHHHHHHHHSSSCCCCEEECGGGGSS-
T ss_pred ------ecC-----------hhHHHHHHHHHHHHHhcCCCceE--EEECCc-CHHHHHHHHHhCCCCcEEEEeeHHhCC-
Confidence 000 00123333333321 4677 457999 5999999999 999999999999999
Q ss_pred CHHHHHHHHHHH
Q 037779 260 DPVRRARAIVQA 271 (310)
Q Consensus 260 dp~~~~~~~~~~ 271 (310)
||.+.+++|++.
T Consensus 224 d~~~~~~~l~~~ 235 (237)
T 3cu2_A 224 ELKTNLKVWKSS 235 (237)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHh
Confidence 999999998765
No 71
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=99.27 E-value=9.8e-12 Score=109.45 Aligned_cols=184 Identities=13% Similarity=0.157 Sum_probs=116.5
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhh-cCcceEe--eccccchHHHHHHHHcCCCeeeecC
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSS-VTIPVMA--KARIGHFVEAQILEAIGVDYVDESE 122 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~-~~lPv~~--kd~i~~~~~~~~~~~aGad~v~~~~ 122 (310)
+.++.+ +.|++++ .+.. +. ...++ ++.++++|+. .+.|+.. +........++.+.++|||++..+.
T Consensus 23 ~~~~~~-~~~vd~i-e~g~-~~-~~~~G-------~~~i~~lr~~~~~~~i~ld~~l~d~p~~~~~~~~~aGad~i~vh~ 91 (218)
T 3jr2_A 23 AVASNV-ASYVDVI-EVGT-IL-AFAEG-------MKAVSTLRHNHPNHILVCDMKTTDGGAILSRMAFEAGADWITVSA 91 (218)
T ss_dssp HHHHHH-GGGCSEE-EECH-HH-HHHHT-------THHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHHTCSEEEEET
T ss_pred HHHHHh-cCCceEE-EeCc-HH-HHhcC-------HHHHHHHHHhCCCCcEEEEEeecccHHHHHHHHHhcCCCEEEEec
Confidence 445554 5678887 3310 10 11233 6889999988 4666654 3221122356788899999998654
Q ss_pred CCCh---hHHHHHHHhcCCCCcE-EeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchh
Q 037779 123 VLTP---ADEENHINKHNFRVPF-VCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDE 198 (310)
Q Consensus 123 ~~~~---~~~~~~~~~~~~~l~v-~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~ 198 (310)
.... .++.+.+++++....+ +..+.|.+++..+.+.|+|++.+. ...++. .
T Consensus 92 ~~~~~~~~~~~~~~~~~g~~~~~d~l~~~T~~~~~~~~~~g~d~v~~~-~~~~~~-----------------~------- 146 (218)
T 3jr2_A 92 AAHIATIAACKKVADELNGEIQIEIYGNWTMQDAKAWVDLGITQAIYH-RSRDAE-----------------L------- 146 (218)
T ss_dssp TSCHHHHHHHHHHHHHHTCEEEEECCSSCCHHHHHHHHHTTCCEEEEE-CCHHHH-----------------H-------
T ss_pred CCCHHHHHHHHHHHHHhCCccceeeeecCCHHHHHHHHHcCccceeee-eccccc-----------------c-------
Confidence 4222 3444555554432232 445678888888888899998763 111000 0
Q ss_pred HHhhhccCCCcHHHHHHHHhc--CCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHc
Q 037779 199 VFTFAKNIAAPYDLVMQTKQL--GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTN 274 (310)
Q Consensus 199 ~~~~~~~~~~~~~l~~~i~~~--~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~ 274 (310)
.+.....+.++.+++. .++|+ ++.||| +++++.+++++|||+++|||+|++++||.+.+ +|++.+++
T Consensus 147 -----~g~~~~~~~l~~i~~~~~~~~pi--~v~GGI-~~~~~~~~~~aGAd~vvvGsaI~~a~dp~~a~-~l~~~~~~ 215 (218)
T 3jr2_A 147 -----AGIGWTTDDLDKMRQLSALGIEL--SITGGI-VPEDIYLFEGIKTKTFIAGRALAGAEGQQTAA-ALREQIDR 215 (218)
T ss_dssp -----HTCCSCHHHHHHHHHHHHTTCEE--EEESSC-CGGGGGGGTTSCEEEEEESGGGSHHHHHHHHH-HHHHHHHH
T ss_pred -----CCCcCCHHHHHHHHHHhCCCCCE--EEECCC-CHHHHHHHHHcCCCEEEEchhhcCCCCHHHHH-HHHHHHHh
Confidence 0011122233334332 36788 457999 59999999999999999999999999999999 99888764
No 72
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=99.24 E-value=5.4e-10 Score=106.70 Aligned_cols=130 Identities=18% Similarity=0.279 Sum_probs=88.8
Q ss_pred hHHHHHHHHcCCCeeee-cCCCChh---HHHHHHHhcCCCCcEEe-ecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHH
Q 037779 104 FVEAQILEAIGVDYVDE-SEVLTPA---DEENHINKHNFRVPFVC-GCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAV 178 (310)
Q Consensus 104 ~~~~~~~~~aGad~v~~-~~~~~~~---~~~~~~~~~~~~l~v~~-~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~ 178 (310)
.+.++.+.++|+|.|.. +....+. +.++.+++. .++++++ .+.|.++++.+.++|+|+|.+. ... +++..
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~-~~i~Vi~g~V~t~e~A~~a~~aGAD~I~vG-~g~-Gs~~~-- 220 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSK-MNIDVIVGNVVTEEATKELIENGADGIKVG-IGP-GSICT-- 220 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTT-CCCEEEEEEECSHHHHHHHHHTTCSEEEEC-C----------
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhc-CCCeEEEeecCCHHHHHHHHHcCCCEEEEe-CCC-CcCcc--
Confidence 46788999999999874 2222333 444555543 3788876 7999999999999999999984 211 11100
Q ss_pred HHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhc---CCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEcccc
Q 037779 179 RHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQL---GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGV 255 (310)
Q Consensus 179 ~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~---~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai 255 (310)
.+..... + .+.+.++..+.+. .++|| |++|||.+++|+.+++++||++|++||+|
T Consensus 221 ---------tr~~~g~----------g-~p~~~al~~v~~~~~~~~IPV--IA~GGI~~~~di~kalalGAd~V~vGt~f 278 (400)
T 3ffs_A 221 ---------TRIVAGV----------G-VPQITAIEKCSSVASKFGIPI--IADGGIRYSGDIGKALAVGASSVMIGSIL 278 (400)
T ss_dssp -----------CCSCB----------C-CCHHHHHHHHHHHHTTTTCCE--EEESCCCSHHHHHHHHTTTCSEEEECGGG
T ss_pred ---------ccccccc----------c-hhHHHHHHHHHHHHHhcCCCE--EecCCCCCHHHHHHHHHcCCCEEEEChHH
Confidence 0011000 0 1235566666542 47899 78999999999999999999999999999
Q ss_pred ccCCC
Q 037779 256 FKSGD 260 (310)
Q Consensus 256 ~~~~d 260 (310)
+.++.
T Consensus 279 ~~t~E 283 (400)
T 3ffs_A 279 AGTEE 283 (400)
T ss_dssp TTBTT
T ss_pred hcCCC
Confidence 99653
No 73
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=99.23 E-value=1.1e-10 Score=106.15 Aligned_cols=178 Identities=17% Similarity=0.149 Sum_probs=110.7
Q ss_pred HHHHHHHHcCCcEEEecc-cccchh------------hh-cCCCCCCCChHHHHHHHhhcCcceEeeccc------cchH
Q 037779 46 EQARIAEEAGACAVMALE-RVPADI------------RA-QGGVARMSDPQLIKQIKSSVTIPVMAKARI------GHFV 105 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~-~~~~d~------------r~-~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i------~~~~ 105 (310)
+.++.+.++ +|+| .+. |.. |+ +. ..|......++.++++|+.+++|+++.... +...
T Consensus 34 ~~~~~l~~~-aD~I-ElG~Pfs-dP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~~~~Pii~m~y~n~v~~~g~~~ 110 (271)
T 1ujp_A 34 QAVEEVLPY-ADLL-EIGLPYS-DPLGDGPVIQRASELALRKGMSVQGALELVREVRALTEKPLFLMTYLNPVLAWGPER 110 (271)
T ss_dssp HHHHHHGGG-CSSE-EEECCCC-C----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCCSCEEEECCHHHHHHHCHHH
T ss_pred HHHHHHHhc-CCEE-EECCCCC-CcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEEEEecCcHHHHhhHHH
Confidence 678888998 9987 332 221 11 00 112211112567889998889999884322 2235
Q ss_pred HHHHHHHcCCCeeeecCCC--ChhHHHHHHHhcCCC-CcEEeecCCHHHHHHHHHhCCCEEEEe-cCCCCCchHHHHHHH
Q 037779 106 EAQILEAIGVDYVDESEVL--TPADEENHINKHNFR-VPFVCGCRNLGESLRRIREGAAMIRTK-GEAGTGNIVEAVRHV 181 (310)
Q Consensus 106 ~~~~~~~aGad~v~~~~~~--~~~~~~~~~~~~~~~-l~v~~~v~t~~ea~~a~~~Gad~I~v~-g~~~~~~~~~~~~~~ 181 (310)
+++.+.++|+|+++..+.. +..++.+.+++++.. +.++....+.+.++...+.+..++... ..+.||.-
T Consensus 111 f~~~~~~aG~dGviv~Dl~~ee~~~~~~~~~~~gl~~i~liap~s~~eri~~ia~~~~gfiy~vs~~G~TG~~------- 183 (271)
T 1ujp_A 111 FFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFLLAPTSTDARIATVVRHATGFVYAVSVTGVTGMR------- 183 (271)
T ss_dssp HHHHHHHHTCCEEECTTCCGGGCHHHHHHHHHHTCEEECEECTTCCHHHHHHHHTTCCSCEEEECC--------------
T ss_pred HHHHHHHcCCCEEEecCCCHHHHHHHHHHHHHcCCceEEEeCCCCCHHHHHHHHHhCCCCEEEEecCcccCCC-------
Confidence 6778899999998865542 234556666666655 444445556665555555555554332 11233310
Q ss_pred HHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccC
Q 037779 182 RSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKS 258 (310)
Q Consensus 182 ~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~ 258 (310)
.. ......++++.+++..++|| +++|||+|++++.++ .|||||+|||+|++.
T Consensus 184 ----------~~-----------~~~~~~~~v~~vr~~~~~Pv--~vGfGI~t~e~a~~~--~~ADgVIVGSAi~~~ 235 (271)
T 1ujp_A 184 ----------ER-----------LPEEVKDLVRRIKARTALPV--AVGFGVSGKATAAQA--AVADGVVVGSALVRA 235 (271)
T ss_dssp --------------------------CCHHHHHHHHTTCCSCE--EEESCCCSHHHHHHH--TTSSEEEECHHHHHH
T ss_pred ----------CC-----------CCccHHHHHHHHHhhcCCCE--EEEcCCCCHHHHHHh--cCCCEEEEChHHhcc
Confidence 00 01224678889988778999 679999999999996 999999999999985
No 74
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=99.16 E-value=1.2e-09 Score=103.03 Aligned_cols=179 Identities=15% Similarity=0.170 Sum_probs=114.9
Q ss_pred ccccCCCHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeecccc--chHHHHHHHHcCC
Q 037779 38 VIMDVVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIG--HFVEAQILEAIGV 115 (310)
Q Consensus 38 ~i~~~~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~--~~~~~~~~~~aGa 115 (310)
.|....++++|.++.++|.-.+ + ..+ .+++.+.+..+.+..++.+..... ..+.++.+.++|+
T Consensus 49 pM~~vte~~lA~A~a~~Gg~gv--i-------~~~------~s~ee~~~~i~~~~~~~~~~~g~~~~~~e~~~~a~~aGv 113 (361)
T 3r2g_A 49 NMDTITESNMANFMHSKGAMGA--L-------HRF------MTIEENIQEFKKCKGPVFVSVGCTENELQRAEALRDAGA 113 (361)
T ss_dssp CSTTTCSHHHHHHHHHTTCEEB--C-------CSC------SCHHHHHHHHHTCCSCCBEEECSSHHHHHHHHHHHHTTC
T ss_pred CCCCchHHHHHHHHHHcCCCEE--E-------eCC------CCHHHHHHHHhhcceEEEEEcCCCHHHHHHHHHHHHcCC
Confidence 3556677899999999997664 3 111 124444433333333333322221 3356788899999
Q ss_pred Ceeeec--CCCC--hhHHHHHHHhcCCCCcEEe-ecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceec
Q 037779 116 DYVDES--EVLT--PADEENHINKHNFRVPFVC-GCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRV 190 (310)
Q Consensus 116 d~v~~~--~~~~--~~~~~~~~~~~~~~l~v~~-~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~ 190 (310)
|.|.++ ...+ ..+.++.+++..+++++++ .+.|+++++.+.+.|+|+|.+.... +....+ +.
T Consensus 114 dvI~id~a~G~~~~~~e~I~~ir~~~~~~~Vi~G~V~T~e~A~~a~~aGaD~I~Vg~g~--G~~~~t-----------r~ 180 (361)
T 3r2g_A 114 DFFCVDVAHAHAKYVGKTLKSLRQLLGSRCIMAGNVATYAGADYLASCGADIIKAGIGG--GSVCST-----------RI 180 (361)
T ss_dssp CEEEEECSCCSSHHHHHHHHHHHHHHTTCEEEEEEECSHHHHHHHHHTTCSEEEECCSS--SSCHHH-----------HH
T ss_pred CEEEEeCCCCCcHhHHHHHHHHHHhcCCCeEEEcCcCCHHHHHHHHHcCCCEEEEcCCC--CcCccc-----------cc
Confidence 987642 2211 2245666666545788999 5999999999999999999984211 111000 00
Q ss_pred ccccCchhHHhhhccCC-CcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCC
Q 037779 191 LRNMDDDEVFTFAKNIA-APYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSG 259 (310)
Q Consensus 191 l~~~~~d~~~~~~~~~~-~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~ 259 (310)
. .+.. +..+.+..+.+... || |+.|||.++.|+.+++++|||+|++||.|+.++
T Consensus 181 ~------------~g~g~p~l~aI~~~~~~~~-PV--IAdGGI~~~~di~kALa~GAd~V~iGr~f~~t~ 235 (361)
T 3r2g_A 181 K------------TGFGVPMLTCIQDCSRADR-SI--VADGGIKTSGDIVKALAFGADFVMIGGMLAGSA 235 (361)
T ss_dssp H------------HCCCCCHHHHHHHHTTSSS-EE--EEESCCCSHHHHHHHHHTTCSEEEESGGGTTBT
T ss_pred c------------CCccHHHHHHHHHHHHhCC-CE--EEECCCCCHHHHHHHHHcCCCEEEEChHHhCCc
Confidence 0 0111 13445555554333 88 678999999999999999999999999999875
No 75
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=99.15 E-value=3.9e-10 Score=100.58 Aligned_cols=174 Identities=20% Similarity=0.240 Sum_probs=108.3
Q ss_pred CCHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeeeecC
Q 037779 43 VTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVDESE 122 (310)
Q Consensus 43 ~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~~~~ 122 (310)
.+.+.++.+.++|+|+|... . ..|......++.++++|+ +++|++.-.... .. ..+|+|.++.++
T Consensus 21 ~t~~~~~~l~~~GaD~ielG------~--S~Gvt~~~~~~~v~~ir~-~~~Pivlm~y~~--n~----i~~G~dg~iiPd 85 (240)
T 1viz_A 21 LPDEQLEILCESGTDAVIIG------G--SDGVTEDNVLRMMSKVRR-FLVPCVLEVSAI--EA----IVPGFDLYFIPS 85 (240)
T ss_dssp CCHHHHHHHHTSCCSEEEEC------C------CHHHHHHHHHHHTT-SSSCEEEECSCG--GG----CCSCCSEEEEEE
T ss_pred ccHHHHHHHHHcCCCEEEEC------C--CCCCCHHHHHHHHHHhhC-cCCCEEEecCcc--cc----ccCCCCEEEEcc
Confidence 34688999999999998322 1 122222223778899998 899998754431 11 167999998665
Q ss_pred CCCh--hHH-----HHHHHhcC-----CCCcE----EeecC-------------CHHHHHHHHHhCC----CEEEEecCC
Q 037779 123 VLTP--ADE-----ENHINKHN-----FRVPF----VCGCR-------------NLGESLRRIREGA----AMIRTKGEA 169 (310)
Q Consensus 123 ~~~~--~~~-----~~~~~~~~-----~~l~v----~~~v~-------------t~~ea~~a~~~Ga----d~I~v~g~~ 169 (310)
..+. .++ ...+++++ ..+.. ++... +++.+.+..+.|. .++...+ .
T Consensus 86 Lp~ee~~~~~~g~~~~a~~~~g~~~~~l~~i~~gy~l~~P~~~~~rl~~~d~~~~~~~~~~~a~~g~~~~~~~VYl~s-~ 164 (240)
T 1viz_A 86 VLNSKNADWIVGMHQKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVAYARVSELLQLPIFYLEY-S 164 (240)
T ss_dssp ETTBSSGGGTTHHHHHHHHHCHHHHHHSCEEEEEEEECCTTSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCSEEEEEC-T
T ss_pred cCcccChhhhcchhHHHHHHcCCCCcceeeeecccEEECCCCceEEeeccCCCCCHHHHHHHHHhCcccCCCEEEEeC-C
Confidence 4321 233 34555544 44332 32222 2334444443332 3333322 0
Q ss_pred CCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcC-CCCEEEEccCCCCCHHHHHHHHHcCCCE
Q 037779 170 GTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQLGCDG 248 (310)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~-~iPVv~ia~GGI~t~~di~~~~~~Gadg 248 (310)
+.....++++.+++.. ++|+ +++|||+|+++++++++ |||+
T Consensus 165 -----------------------------------G~~~~~~~i~~i~~~~~~~Pv--~vGgGI~t~e~a~~~~~-gAd~ 206 (240)
T 1viz_A 165 -----------------------------------GVLGDIEAVKKTKAVLETSTL--FYGGGIKDAETAKQYAE-HADV 206 (240)
T ss_dssp -----------------------------------TSCCCHHHHHHHHHTCSSSEE--EEESSCCSHHHHHHHHT-TCSE
T ss_pred -----------------------------------CccChHHHHHHHHHhcCCCCE--EEEeccCCHHHHHHHHh-CCCE
Confidence 1133578889998877 8999 67999999999999999 9999
Q ss_pred EEEccccccCCCHHHHHHHHHHHHH
Q 037779 249 VFVGSGVFKSGDPVRRARAIVQAVT 273 (310)
Q Consensus 249 V~VGsai~~~~dp~~~~~~~~~~~~ 273 (310)
|+|||++++ +|...+++ .++++
T Consensus 207 VIVGSa~v~--~~~~~~~~-v~~~~ 228 (240)
T 1viz_A 207 IVVGNAVYE--DFDRALKT-VAAVK 228 (240)
T ss_dssp EEECTHHHH--CHHHHHTH-HHHHH
T ss_pred EEEChHHHh--CHHHHHHH-HHHHH
Confidence 999999998 45435555 44444
No 76
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=99.15 E-value=4e-10 Score=101.09 Aligned_cols=177 Identities=17% Similarity=0.144 Sum_probs=112.1
Q ss_pred HHHHHHHHcCCcEEEecc-ccc-------chh----hhc-CCCCCCCChHHHHHHHhhcCcceEeecccc------chHH
Q 037779 46 EQARIAEEAGACAVMALE-RVP-------ADI----RAQ-GGVARMSDPQLIKQIKSSVTIPVMAKARIG------HFVE 106 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~-~~~-------~d~----r~~-~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~------~~~~ 106 (310)
+.++.+.++|||.| -|. |.. +-. |+. +|.....-++.++++|.. +|++.....+ ...+
T Consensus 32 ~~~~~l~~~GaD~i-ElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~--~Pivlm~Y~N~i~~~G~e~F 108 (252)
T 3tha_A 32 AFLQRLDQSPIDIL-ELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIKTK--KALVFMVYYNLIFSYGLEKF 108 (252)
T ss_dssp HHHHTGGGSSCSEE-EEECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCCCS--SEEEEECCHHHHHHHCHHHH
T ss_pred HHHHHHHHcCCCEE-EECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHhcC--CCEEEEeccCHHHHhhHHHH
Confidence 67889999999987 443 211 111 111 133222224445555533 7987764433 2346
Q ss_pred HHHHHHcCCCeeeecCCCChh---HHHHHHHhcCCCCcEEeecCC-HHHHHHHHHhCCCEEEEecC-CCCCchHHHHHHH
Q 037779 107 AQILEAIGVDYVDESEVLTPA---DEENHINKHNFRVPFVCGCRN-LGESLRRIREGAAMIRTKGE-AGTGNIVEAVRHV 181 (310)
Q Consensus 107 ~~~~~~aGad~v~~~~~~~~~---~~~~~~~~~~~~l~v~~~v~t-~~ea~~a~~~Gad~I~v~g~-~~~~~~~~~~~~~ 181 (310)
++.+.++|+|++++++. +++ ++.+.+++++.....++..+| .+.+++..+.+..+|..... +.||.-.
T Consensus 109 ~~~~~~aGvdG~IipDL-P~eE~~~~~~~~~~~Gl~~I~lvaP~t~~eRi~~ia~~a~gFiY~Vs~~GvTG~~~------ 181 (252)
T 3tha_A 109 VKKAKSLGICALIVPEL-SFEESDDLIKECERYNIALITLVSVTTPKERVKKLVKHAKGFIYLLASIGITGTKS------ 181 (252)
T ss_dssp HHHHHHTTEEEEECTTC-CGGGCHHHHHHHHHTTCEECEEEETTSCHHHHHHHHTTCCSCEEEECCSCSSSCSH------
T ss_pred HHHHHHcCCCEEEeCCC-CHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHhCCCeEEEEecCCCCCccc------
Confidence 78899999999997765 433 455556667776666566555 55566666666677754422 2233100
Q ss_pred HHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEcccccc
Q 037779 182 RSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 182 ~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~ 257 (310)
.. .....++++.+++..++|+ ++++||++++++.++.+ +||||+|||+|++
T Consensus 182 ----------------~~------~~~~~~~v~~vr~~~~~Pv--~vGfGIst~e~a~~~~~-~ADGVIVGSAiVk 232 (252)
T 3tha_A 182 ----------------VE------EAILQDKVKEIRSFTNLPI--FVGFGIQNNQDVKRMRK-VADGVIVGTSIVK 232 (252)
T ss_dssp ----------------HH------HHHHHHHHHHHHTTCCSCE--EEESSCCSHHHHHHHTT-TSSEEEECHHHHH
T ss_pred ----------------CC------CHHHHHHHHHHHHhcCCcE--EEEcCcCCHHHHHHHHh-cCCEEEECHHHHH
Confidence 00 0112567888888778999 56999999999999876 5999999999987
No 77
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=99.14 E-value=2.7e-10 Score=107.07 Aligned_cols=48 Identities=17% Similarity=0.205 Sum_probs=40.2
Q ss_pred cHHHHHHHHhcC-CCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccC
Q 037779 209 PYDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKS 258 (310)
Q Consensus 209 ~~~l~~~i~~~~-~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~ 258 (310)
.++.++.+.+.. ++|| |++|||.+++|+.+++.+|||+|++|++++..
T Consensus 238 ~~~~l~~v~~~~~~ipv--ia~GGI~~~~d~~k~l~~GAd~V~iG~~~l~~ 286 (349)
T 1p0k_A 238 TAASLAEIRSEFPASTM--IASGGLQDALDVAKAIALGASCTGMAGHFLKA 286 (349)
T ss_dssp HHHHHHHHHHHCTTSEE--EEESSCCSHHHHHHHHHTTCSEEEECHHHHHH
T ss_pred HHHHHHHHHHhcCCCeE--EEECCCCCHHHHHHHHHcCCCEEEEcHHHHHH
Confidence 345556665543 7899 67999999999999999999999999999985
No 78
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=99.08 E-value=8e-09 Score=93.20 Aligned_cols=208 Identities=16% Similarity=0.211 Sum_probs=128.7
Q ss_pred HHHHHHHHcCCcEEEecc--cccchhhh-cCCCCCCCC-hHHHH----HHHhhc-CcceEeeccc-c---c-hHHHHHHH
Q 037779 46 EQARIAEEAGACAVMALE--RVPADIRA-QGGVARMSD-PQLIK----QIKSSV-TIPVMAKARI-G---H-FVEAQILE 111 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~--~~~~d~r~-~~G~~~~~~-~~~i~----~i~~~~-~lPv~~kd~i-~---~-~~~~~~~~ 111 (310)
=.|+..+.+|+|.|..+| +..-..|. ..|-.-..| .+.+. ++-..+ ++||+....- + + ....+.+.
T Consensus 39 lsAk~~e~gGaDlii~ynsGrfR~~G~~slag~lpygnaN~iv~e~~~evlp~v~~iPV~Agv~~~DP~~~~g~~Le~lk 118 (286)
T 2p10_A 39 LSAKSEEAGDIDLIVIYNSGRYRMAGRGSLAGLLAYGNANQIVVDMAREVLPVVRHTPVLAGVNGTDPFMVMSTFLRELK 118 (286)
T ss_dssp HHHHHHHHTTCSEEEECHHHHHHHTTCCGGGGGBTEEEHHHHHHHHHHHHGGGCSSSCEEEEECTTCTTCCHHHHHHHHH
T ss_pred hhhHHHHhCCCCEEEEeccchhhhcCccchhhhccccCHHHHHHHHHHhhhccCCCCCEEEEECCcCCCcCHHHHHHHHH
Confidence 458999999999997776 11100010 001000111 22233 333333 7999987211 1 2 13447888
Q ss_pred HcCCCeeeecC----------------CCChhHHHHHHHh-cCCCCcEEeecCCHHHHHHHHHhCCCEEEEecC-CCCCc
Q 037779 112 AIGVDYVDESE----------------VLTPADEENHINK-HNFRVPFVCGCRNLGESLRRIREGAAMIRTKGE-AGTGN 173 (310)
Q Consensus 112 ~aGad~v~~~~----------------~~~~~~~~~~~~~-~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~-~~~~~ 173 (310)
++|+.+++.+. .+...+..+.+++ +..++..++.+.|+++++...++|+|+|.++.+ ..++.
T Consensus 119 ~~Gf~Gv~N~ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~~gL~Ti~~v~~~eeA~amA~agpDiI~~h~glT~ggl 198 (286)
T 2p10_A 119 EIGFAGVQNFPTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKLDLLTTPYVFSPEDAVAMAKAGADILVCHMGLTTGGA 198 (286)
T ss_dssp HHTCCEEEECSCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHTTCEECCEECSHHHHHHHHHHTCSEEEEECSCC----
T ss_pred HhCCceEEECCCcccccchhhhhHhhcCCCHHHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHcCCCEEEECCCCCCCCc
Confidence 99999997432 2345566666666 667899999999999999999999999999833 11111
Q ss_pred hHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhc-CCCCEEEEccCCCCCHHHHHHHHHc--CCCEEE
Q 037779 174 IVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQL-GRLPVVHFAAGGVATPADAAMMMQL--GCDGVF 250 (310)
Q Consensus 174 ~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~-~~iPVv~ia~GGI~t~~di~~~~~~--GadgV~ 250 (310)
+- .+ ...+.+. + ...-.++.+.+++. .++.|+ ..+|||.+++|++.+++. |++|+.
T Consensus 199 IG----------~~----~avs~~~----~--~e~i~~i~~a~~~vnpdvivL-c~gGpIstpeDv~~~l~~t~G~~G~~ 257 (286)
T 2p10_A 199 IG----------AR----SGKSMDD----C--VSLINECIEAARTIRDDIIIL-SHGGPIANPEDARFILDSCQGCHGFY 257 (286)
T ss_dssp -------------------CCCHHH----H--HHHHHHHHHHHHHHCSCCEEE-EESTTCCSHHHHHHHHHHCTTCCEEE
T ss_pred cc----------CC----CcccHHH----h--HHHHHHHHHHHHHhCCCcEEE-ecCCCCCCHHHHHHHHhcCCCccEEE
Confidence 10 00 0001000 0 00012233333443 345443 456699999999999998 999999
Q ss_pred EccccccCCCHHHHHHHHHHHHHcC
Q 037779 251 VGSGVFKSGDPVRRARAIVQAVTNY 275 (310)
Q Consensus 251 VGsai~~~~dp~~~~~~~~~~~~~~ 275 (310)
.+|++.+.+ |++.++++.+.+++.
T Consensus 258 gASsier~p-~e~ai~~~~~~fk~~ 281 (286)
T 2p10_A 258 GASSMERLP-AEEAIRSQTLAFKAI 281 (286)
T ss_dssp ESHHHHHHH-HHHHHHHHHHHHHTC
T ss_pred eehhhhcCC-HHHHHHHHHHHHHhc
Confidence 999999998 999999998888764
No 79
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=99.06 E-value=1.2e-09 Score=102.83 Aligned_cols=157 Identities=20% Similarity=0.233 Sum_probs=99.8
Q ss_pred HHHHHHHHcCCcEEEecc-cccch--hhhcCCCCCCCChHHHH----HHHhhcCcceEeeccccchHHHHHHHHcCCCee
Q 037779 46 EQARIAEEAGACAVMALE-RVPAD--IRAQGGVARMSDPQLIK----QIKSSVTIPVMAKARIGHFVEAQILEAIGVDYV 118 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~-~~~~d--~r~~~G~~~~~~~~~i~----~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v 118 (310)
+.++.+.++|+++| ++| .+|.. .+...|+..+..++.+. ++++.+++||++|.+++..+
T Consensus 74 ~aA~~a~~~G~D~I-eIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~~------------- 139 (350)
T 3b0p_A 74 EAARIGEAFGYDEI-NLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEG------------- 139 (350)
T ss_dssp HHHHHHHHTTCSEE-EEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCBTT-------------
T ss_pred HHHHHHHHcCCCEE-EECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCcCc-------------
Confidence 56888888999998 787 44432 22223454556666554 55666789999987765211
Q ss_pred eecCCCChhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCC-CchHHHHHHHHHhhcceecccccCch
Q 037779 119 DESEVLTPADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGT-GNIVEAVRHVRSVMGDIRVLRNMDDD 197 (310)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~d 197 (310)
..+..+. .+.++.+.+.|+|+|.+++.... +.. .....
T Consensus 140 ----~~~~~~~-------------------~~~a~~l~~aG~d~I~V~~r~~~~g~~-----------------g~~~~- 178 (350)
T 3b0p_A 140 ----KETYRGL-------------------AQSVEAMAEAGVKVFVVHARSALLALS-----------------TKANR- 178 (350)
T ss_dssp ----CCCHHHH-------------------HHHHHHHHHTTCCEEEEECSCBC---------------------------
T ss_pred ----cccHHHH-------------------HHHHHHHHHcCCCEEEEecCchhcccC-----------------ccccc-
Confidence 0011111 12344556778888888754211 000 00000
Q ss_pred hHHhhhccCCCcHHHHHHHHhcC-CCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHH
Q 037779 198 EVFTFAKNIAAPYDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRAR 266 (310)
Q Consensus 198 ~~~~~~~~~~~~~~l~~~i~~~~-~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~ 266 (310)
......+++++.+++.. ++|| |++|||.|++++.++++ |||+|++|++++..++....++
T Consensus 179 ------~~~~~~~~~i~~ik~~~~~iPV--ianGgI~s~eda~~~l~-GaD~V~iGRa~l~~P~l~~~i~ 239 (350)
T 3b0p_A 179 ------EIPPLRHDWVHRLKGDFPQLTF--VTNGGIRSLEEALFHLK-RVDGVMLGRAVYEDPFVLEEAD 239 (350)
T ss_dssp -------CCCCCHHHHHHHHHHCTTSEE--EEESSCCSHHHHHHHHT-TSSEEEECHHHHHCGGGGTTHH
T ss_pred ------CCCcccHHHHHHHHHhCCCCeE--EEECCcCCHHHHHHHHh-CCCEEEECHHHHhCcHHHHHHH
Confidence 00123578888888876 8999 67999999999999998 9999999999998776554443
No 80
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=99.06 E-value=5.9e-09 Score=97.53 Aligned_cols=180 Identities=16% Similarity=0.144 Sum_probs=112.9
Q ss_pred cccCCCHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeecccc--chHHHHHHHHcC--
Q 037779 39 IMDVVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIG--HFVEAQILEAIG-- 114 (310)
Q Consensus 39 i~~~~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~--~~~~~~~~~~aG-- 114 (310)
+....+.++++.+.+.|.-.+... .+. .. ..+.++++++ .++|+.+..... ..+.++.+.++|
T Consensus 54 mag~s~~~la~a~~~~gg~g~~~~----~~~-~~-------~~~~i~~~~~-~g~~v~v~~g~~~~~~~~a~~~~~~g~~ 120 (336)
T 1ypf_A 54 MQTIIDERIATYLAENNYFYIMHR----FQP-EK-------RISFIRDMQS-RGLIASISVGVKEDEYEFVQQLAAEHLT 120 (336)
T ss_dssp STTTCCHHHHHHHHHTTCCCCCCC----SSG-GG-------HHHHHHHHHH-TTCCCEEEECCSHHHHHHHHHHHHTTCC
T ss_pred CCCCChHHHHHHHHhCCCEEEecC----CCC-HH-------HHHHHHHHHh-cCCeEEEeCCCCHHHHHHHHHHHhcCCC
Confidence 344556788887666654433111 111 10 1334555553 356777663221 224456677889
Q ss_pred CCeeeec--CCC--ChhHHHHHHHhcCCCCcEEee-cCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhccee
Q 037779 115 VDYVDES--EVL--TPADEENHINKHNFRVPFVCG-CRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIR 189 (310)
Q Consensus 115 ad~v~~~--~~~--~~~~~~~~~~~~~~~l~v~~~-v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~ 189 (310)
++.+... ... ...+.++.+++...+.+++.+ +.+.++++++.+.|+|.|.+.+..+.. .
T Consensus 121 ~~~i~i~~~~G~~~~~~~~i~~lr~~~~~~~vi~G~v~s~e~A~~a~~aGad~Ivvs~hgG~~--~-------------- 184 (336)
T 1ypf_A 121 PEYITIDIAHGHSNAVINMIQHIKKHLPESFVIAGNVGTPEAVRELENAGADATKVGIGPGKV--C-------------- 184 (336)
T ss_dssp CSEEEEECSSCCSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTT--C--------------
T ss_pred CCEEEEECCCCCcHHHHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEecCCCce--e--------------
Confidence 8887532 111 123556666664445667777 889999999999999999885332110 0
Q ss_pred cccccCchhHHhhhccCC-C--cHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccC
Q 037779 190 VLRNMDDDEVFTFAKNIA-A--PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKS 258 (310)
Q Consensus 190 ~l~~~~~d~~~~~~~~~~-~--~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~ 258 (310)
.+.. . .... + +++.+..+.+..++|| |++|||.++.|+.+++.+||++|++|++++.+
T Consensus 185 --~~~~---~----~~~g~~g~~~~~l~~v~~~~~ipV--Ia~GGI~~g~Dv~kalalGAdaV~iGr~~l~t 245 (336)
T 1ypf_A 185 --ITKI---K----TGFGTGGWQLAALRWCAKAASKPI--IADGGIRTNGDVAKSIRFGATMVMIGSLFAGH 245 (336)
T ss_dssp --HHHH---H----HSCSSTTCHHHHHHHHHHTCSSCE--EEESCCCSTHHHHHHHHTTCSEEEESGGGTTC
T ss_pred --eccc---c----cCcCCchhHHHHHHHHHHHcCCcE--EEeCCCCCHHHHHHHHHcCCCEEEeChhhhcc
Confidence 0000 0 0111 1 4677888887778999 67999999999999999999999999999953
No 81
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=99.03 E-value=3.8e-10 Score=100.25 Aligned_cols=162 Identities=19% Similarity=0.232 Sum_probs=99.8
Q ss_pred CCHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeeeecC
Q 037779 43 VTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVDESE 122 (310)
Q Consensus 43 ~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~~~~ 122 (310)
.+.+.++.+.++|+|.|... . ..|.....-++.++++|+ +++|++.-.... .. .++|+|++++++
T Consensus 21 ~t~~~~~~l~~~GaD~IelG------~--S~g~t~~~~~~~v~~ir~-~~~Pivl~~y~~--n~----i~~gvDg~iipd 85 (234)
T 2f6u_A 21 NTDEIIKAVADSGTDAVMIS------G--TQNVTYEKARTLIEKVSQ-YGLPIVVEPSDP--SN----VVYDVDYLFVPT 85 (234)
T ss_dssp CCHHHHHHHHTTTCSEEEEC------C--CTTCCHHHHHHHHHHHTT-SCCCEEECCSSC--CC----CCCCSSEEEEEE
T ss_pred ccHHHHHHHHHcCCCEEEEC------C--CCCCCHHHHHHHHHHhcC-CCCCEEEecCCc--ch----hhcCCCEEEEcc
Confidence 34578999999999998332 1 123222223667888888 899998754441 11 168999998664
Q ss_pred CCC--hhHHH-----HHH-------HhcC-----CCCcE----EeecC-------------CHHHHHHHHHhCC-----C
Q 037779 123 VLT--PADEE-----NHI-------NKHN-----FRVPF----VCGCR-------------NLGESLRRIREGA-----A 161 (310)
Q Consensus 123 ~~~--~~~~~-----~~~-------~~~~-----~~l~v----~~~v~-------------t~~ea~~a~~~Ga-----d 161 (310)
.++ ..++. +.+ ++++ ..+.. ++... +++.++...+.|. .
T Consensus 86 Lp~ee~~~~~~g~~~~~~~~~~~~~~~~g~~~~~l~~I~~gYil~~P~~~~~rl~~g~~~~~~e~~~~~a~~g~~~l~~~ 165 (234)
T 2f6u_A 86 VLNSADGDWITGKHAQWVRMHYENLQKFTEIIESEFIQIEGYIVLNPDSAVARVTKALCNIDKELAASYALVGEKLFNLP 165 (234)
T ss_dssp ETTBSBGGGTTHHHHHHHHTTGGGHHHHHHHHHSTTEEEEEEEECCTTSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCCS
T ss_pred cCCCCCHHHHhhhHHHHHHhhhhhHHHcCCcccceeeeecceEEECCCCceEEeecCCCCCCHHHHHHHHHhhhhhcCCC
Confidence 432 12222 222 2233 33222 22221 2222333333333 3
Q ss_pred EEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcC-CCCEEEEccCCCCCHHHHHH
Q 037779 162 MIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLG-RLPVVHFAAGGVATPADAAM 240 (310)
Q Consensus 162 ~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~-~iPVv~ia~GGI~t~~di~~ 240 (310)
+|...+ . +.....++++.+++.. ++|+ +++|||+|++++++
T Consensus 166 ~Vyl~~---------------------------~---------G~~~~~~~i~~i~~~~~~~Pv--~vGgGI~s~e~a~~ 207 (234)
T 2f6u_A 166 IIYIEY---------------------------S---------GTYGNPELVAEVKKVLDKARL--FYGGGIDSREKARE 207 (234)
T ss_dssp EEEEEC---------------------------T---------TSCCCHHHHHHHHHHCSSSEE--EEESCCCSHHHHHH
T ss_pred EEEEeC---------------------------C---------CCcchHHHHHHHHHhCCCCCE--EEEecCCCHHHHHH
Confidence 333221 0 1233678889998877 8999 67999999999999
Q ss_pred HHHcCCCEEEEccccccC
Q 037779 241 MMQLGCDGVFVGSGVFKS 258 (310)
Q Consensus 241 ~~~~GadgV~VGsai~~~ 258 (310)
+++ |||+|+|||++++.
T Consensus 208 ~~~-gAd~VIVGSa~v~~ 224 (234)
T 2f6u_A 208 MLR-YADTIIVGNVIYEK 224 (234)
T ss_dssp HHH-HSSEEEECHHHHHH
T ss_pred HHh-CCCEEEEChHHHhC
Confidence 999 99999999999984
No 82
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=99.02 E-value=1.3e-08 Score=92.00 Aligned_cols=178 Identities=20% Similarity=0.237 Sum_probs=107.4
Q ss_pred cCCCH-HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeec--cc---c------chHHHH
Q 037779 41 DVVTP-EQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKA--RI---G------HFVEAQ 108 (310)
Q Consensus 41 ~~~~~-~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd--~i---~------~~~~~~ 108 (310)
...++ +.++.+.+.|++++ .++ +..++... ..+.+++++. .. + ....++
T Consensus 39 ~~~di~~~~~~a~~~~~~av-~v~-----------------~~~v~~~~-~~~~~liv~~~~~~~~~g~~~~~~~~~~ve 99 (263)
T 1w8s_A 39 DSADPEYILRLARDAGFDGV-VFQ-----------------RGIAEKYY-DGSVPLILKLNGKTTLYNGEPVSVANCSVE 99 (263)
T ss_dssp GGGCHHHHHHHHHHHTCSEE-EEC-----------------HHHHHHHC-CSSSCEEEECEECCTTCCSSCCCEESSCHH
T ss_pred chhhHHHHHHHHHhhCCCEE-EEC-----------------HHHHHHhh-cCCCcEEEEEeCCCCcCCCCccchHHHHHH
Confidence 34444 67999999999998 331 22333333 3345544431 11 1 113567
Q ss_pred HHHHcCCCeeeecC---CCChhHHHHHHHh-----cCCCCcEEeecC----------CHHHH----HHHHHhCCCEEEEe
Q 037779 109 ILEAIGVDYVDESE---VLTPADEENHINK-----HNFRVPFVCGCR----------NLGES----LRRIREGAAMIRTK 166 (310)
Q Consensus 109 ~~~~aGad~v~~~~---~~~~~~~~~~~~~-----~~~~l~v~~~v~----------t~~ea----~~a~~~Gad~I~v~ 166 (310)
.+.+.||+.|.... .....+..+.+.+ +..++++++.+. +.++. +.+.+.|+|||++.
T Consensus 100 ~Ai~~Ga~~v~~~~nig~~~~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~~GAD~vkt~ 179 (263)
T 1w8s_A 100 EAVSLGASAVGYTIYPGSGFEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYAARIALELGADAMKIK 179 (263)
T ss_dssp HHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHCCCCEEEEEEecCCcCHHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHHHHHHHHcCCCEEEEc
Confidence 78889999986221 1122222222211 223566666542 34433 34567899999985
Q ss_pred cCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCC-CEEEEccCCCC--CHHHHHHHH-
Q 037779 167 GEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRL-PVVHFAAGGVA--TPADAAMMM- 242 (310)
Q Consensus 167 g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~i-PVv~ia~GGI~--t~~di~~~~- 242 (310)
. ++ ..+.++.+.+..+. || +++|||+ +.+++.+.+
T Consensus 180 -~--~~------------------------------------~~e~~~~~~~~~~~~pV--~asGGi~~~~~~~~l~~i~ 218 (263)
T 1w8s_A 180 -Y--TG------------------------------------DPKTFSWAVKVAGKVPV--LMSGGPKTKTEEDFLKQVE 218 (263)
T ss_dssp -C--CS------------------------------------SHHHHHHHHHHTTTSCE--EEECCSCCSSHHHHHHHHH
T ss_pred -C--CC------------------------------------CHHHHHHHHHhCCCCeE--EEEeCCCCCCHHHHHHHHH
Confidence 1 11 22344555554455 98 4579998 777655444
Q ss_pred ---HcCCCEEEEccccccCCCHHHHHHHHHHHHHcCCCh
Q 037779 243 ---QLGCDGVFVGSGVFKSGDPVRRARAIVQAVTNYSDP 278 (310)
Q Consensus 243 ---~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~~~~~ 278 (310)
++||+|+.+|++|++++||.++++++.+.++....+
T Consensus 219 ~~~~aGA~GvsvgraI~~~~dp~~~~~~l~~~v~~~~~~ 257 (263)
T 1w8s_A 219 GVLEAGALGIAVGRNVWQRRDALKFARALAELVYGGKKL 257 (263)
T ss_dssp HHHHTTCCEEEESHHHHTSTTHHHHHHHHHHHHC-----
T ss_pred HHHHcCCeEEEEehhhcCCcCHHHHHHHHHHHHhcCCCH
Confidence 899999999999999999999999999999865544
No 83
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.00 E-value=8.8e-09 Score=101.08 Aligned_cols=129 Identities=18% Similarity=0.181 Sum_probs=90.1
Q ss_pred hHHHHHHHHcCCCeeeec-CCCChh---HHHHHHHhcCCCCcEEee-cCCHHHHHHHHHhCCCEEEEecCCCCCchHHHH
Q 037779 104 FVEAQILEAIGVDYVDES-EVLTPA---DEENHINKHNFRVPFVCG-CRNLGESLRRIREGAAMIRTKGEAGTGNIVEAV 178 (310)
Q Consensus 104 ~~~~~~~~~aGad~v~~~-~~~~~~---~~~~~~~~~~~~l~v~~~-v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~ 178 (310)
.+.++.+.++|+|.|.+. ....+. +.++.+++..+++++++. +.|.++++.+.++|+|+|.+....++...-
T Consensus 231 ~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~vg~g~Gs~~~t--- 307 (490)
T 4avf_A 231 GERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGNIATAEAAKALAEAGADAVKVGIGPGSICTT--- 307 (490)
T ss_dssp HHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTCHH---
T ss_pred HHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHHCCCceEEEeeeCcHHHHHHHHHcCCCEEEECCCCCcCCCc---
Confidence 467788889999998732 222233 566666665557777775 899999999999999999984211111000
Q ss_pred HHHHHhhcceecccccCchhHHhhhccC-CCcHHHHHHHHhc---CCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccc
Q 037779 179 RHVRSVMGDIRVLRNMDDDEVFTFAKNI-AAPYDLVMQTKQL---GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSG 254 (310)
Q Consensus 179 ~~~~~~~~~~~~l~~~~~d~~~~~~~~~-~~~~~l~~~i~~~---~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsa 254 (310)
+... +. .+.++.+..+.+. .++|| |++|||.+++|+.+++++||++|++||+
T Consensus 308 ----------~~~~------------g~g~p~~~~l~~v~~~~~~~~iPV--Ia~GGI~~~~di~kal~~GAd~V~vGs~ 363 (490)
T 4avf_A 308 ----------RIVA------------GVGVPQISAIANVAAALEGTGVPL--IADGGIRFSGDLAKAMVAGAYCVMMGSM 363 (490)
T ss_dssp ----------HHHT------------CBCCCHHHHHHHHHHHHTTTTCCE--EEESCCCSHHHHHHHHHHTCSEEEECTT
T ss_pred ----------cccC------------CCCccHHHHHHHHHHHhccCCCcE--EEeCCCCCHHHHHHHHHcCCCeeeecHH
Confidence 0000 11 1235555555552 36899 7899999999999999999999999999
Q ss_pred cccCC
Q 037779 255 VFKSG 259 (310)
Q Consensus 255 i~~~~ 259 (310)
|+.++
T Consensus 364 ~~~~~ 368 (490)
T 4avf_A 364 FAGTE 368 (490)
T ss_dssp TTTBT
T ss_pred HhcCC
Confidence 99865
No 84
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=98.93 E-value=8.2e-09 Score=95.79 Aligned_cols=146 Identities=22% Similarity=0.321 Sum_probs=94.8
Q ss_pred HHHHHHHHcCCcEEEecc-cccch--hhhcCCCCCCCChHHH----HHHHhhcCcceEeeccccchHHHHHHHHcCCCee
Q 037779 46 EQARIAEEAGACAVMALE-RVPAD--IRAQGGVARMSDPQLI----KQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYV 118 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~-~~~~d--~r~~~G~~~~~~~~~i----~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v 118 (310)
+.|+.+.++ +++| ++| .+|.. .+...|+..++.++.+ +.+++.+++||.+|.+.+..
T Consensus 75 ~aa~~a~~~-~d~I-ein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~G~~-------------- 138 (318)
T 1vhn_A 75 EAARILSEK-YKWI-DLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWE-------------- 138 (318)
T ss_dssp HHHHHHTTT-CSEE-EEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEESCSS--------------
T ss_pred HHHHHHHHh-CCEE-EEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhCCCEEEEecCCCC--------------
Confidence 467888888 9998 787 44432 2222344455556654 55666778999999765420
Q ss_pred eecCCCChhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchh
Q 037779 119 DESEVLTPADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDE 198 (310)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~ 198 (310)
.. + +.+.++.+.+.|+|+|.+++...... ..
T Consensus 139 ---~~-~----------------------~~~~a~~l~~~G~d~i~v~g~~~~~~--------------------~~--- 169 (318)
T 1vhn_A 139 ---KN-E----------------------VEEIYRILVEEGVDEVFIHTRTVVQS--------------------FT--- 169 (318)
T ss_dssp ---SC-C----------------------HHHHHHHHHHTTCCEEEEESSCTTTT--------------------TS---
T ss_pred ---hH-H----------------------HHHHHHHHHHhCCCEEEEcCCCcccc--------------------CC---
Confidence 00 0 01234555667888887774321100 00
Q ss_pred HHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHH-cCCCEEEEccccccCCCHHHHHHH
Q 037779 199 VFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQ-LGCDGVFVGSGVFKSGDPVRRARA 267 (310)
Q Consensus 199 ~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~-~GadgV~VGsai~~~~dp~~~~~~ 267 (310)
-...+++++.+++ ++|| |++|||.|++++.++++ .|||+|++|++++..++....++.
T Consensus 170 -------~~~~~~~i~~i~~--~ipV--i~~GgI~s~~da~~~l~~~gad~V~iGR~~l~~P~l~~~~~~ 228 (318)
T 1vhn_A 170 -------GRAEWKALSVLEK--RIPT--FVSGDIFTPEDAKRALEESGCDGLLVARGAIGRPWIFKQIKD 228 (318)
T ss_dssp -------SCCCGGGGGGSCC--SSCE--EEESSCCSHHHHHHHHHHHCCSEEEESGGGTTCTTHHHHHHH
T ss_pred -------CCcCHHHHHHHHc--CCeE--EEECCcCCHHHHHHHHHcCCCCEEEECHHHHhCcchHHHHHH
Confidence 0123455555655 7899 67999999999999998 799999999999998887665544
No 85
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=98.93 E-value=2.1e-08 Score=98.80 Aligned_cols=182 Identities=15% Similarity=0.178 Sum_probs=112.3
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhh-------cCcceEeecccc--chHHHHHHHHcCCC
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSS-------VTIPVMAKARIG--HFVEAQILEAIGVD 116 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~-------~~lPv~~kd~i~--~~~~~~~~~~aGad 116 (310)
+..+.+.+.+...+.+++ +....-|- ....+.++.+... ..+++.+..... ..+.++.+.++|+|
T Consensus 197 eal~~m~~~~i~~lpVVD----e~g~l~Gi--IT~~Dil~~~~~p~a~~D~~~rl~V~aavg~~~d~~era~aLveaGvd 270 (511)
T 3usb_A 197 EAEKILQKYKIEKLPLVD----NNGVLQGL--ITIKDIEKVIEFPNSAKDKQGRLLVGAAVGVTADAMTRIDALVKASVD 270 (511)
T ss_dssp HHHHHHHHHTCSEEEEEC----TTSBEEEE--EEHHHHHHHHHCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEEEe----CCCCEeee--ccHHHHHHhhhcccchhhhccceeeeeeeeeccchHHHHHHHHhhccc
Confidence 678888888888764441 11111122 2223455555431 123444333222 34667788999999
Q ss_pred eeeec-CCC---ChhHHHHHHHhcCCCCcEEe-ecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecc
Q 037779 117 YVDES-EVL---TPADEENHINKHNFRVPFVC-GCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVL 191 (310)
Q Consensus 117 ~v~~~-~~~---~~~~~~~~~~~~~~~l~v~~-~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l 191 (310)
.+.+. ... ...+.++.+++..+++++++ ++.|.++++.+.+.|+|+|.+. ...+. +... +..
T Consensus 271 ~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v~t~e~a~~~~~aGad~i~vg-~g~gs-i~~~-----------~~~ 337 (511)
T 3usb_A 271 AIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNVATAEATKALIEAGANVVKVG-IGPGS-ICTT-----------RVV 337 (511)
T ss_dssp EEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEEC-SSCST-TCCH-----------HHH
T ss_pred eEEecccccchhhhhhHHHHHHHhCCCceEEeeeeccHHHHHHHHHhCCCEEEEC-CCCcc-cccc-----------ccc
Confidence 98742 221 12356666666555676666 7999999999999999999884 21111 1000 000
Q ss_pred cccCchhHHhhhccC-CCcHHHHHHHHh---cCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCC
Q 037779 192 RNMDDDEVFTFAKNI-AAPYDLVMQTKQ---LGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGD 260 (310)
Q Consensus 192 ~~~~~d~~~~~~~~~-~~~~~l~~~i~~---~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~d 260 (310)
. ++ .+....+..+.+ ..++|| |++|||.+++|+.+++++||++|++||+|..+..
T Consensus 338 ~------------g~g~p~~~~l~~v~~~~~~~~iPV--Ia~GGI~~~~di~kala~GA~~V~vGs~~~~~~e 396 (511)
T 3usb_A 338 A------------GVGVPQLTAVYDCATEARKHGIPV--IADGGIKYSGDMVKALAAGAHVVMLGSMFAGVAE 396 (511)
T ss_dssp H------------CCCCCHHHHHHHHHHHHHTTTCCE--EEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTT
T ss_pred c------------CCCCCcHHHHHHHHHHHHhCCCcE--EEeCCCCCHHHHHHHHHhCchhheecHHHhcCcc
Confidence 0 11 123444444432 236899 7899999999999999999999999999977653
No 86
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=98.93 E-value=1.7e-08 Score=99.23 Aligned_cols=128 Identities=15% Similarity=0.188 Sum_probs=90.0
Q ss_pred hHHHHHHHHcCCCeeeec-CCCCh---hHHHHHHHhcCCCCcEEe-ecCCHHHHHHHHHhCCCEEEEe-cCCCCCchHHH
Q 037779 104 FVEAQILEAIGVDYVDES-EVLTP---ADEENHINKHNFRVPFVC-GCRNLGESLRRIREGAAMIRTK-GEAGTGNIVEA 177 (310)
Q Consensus 104 ~~~~~~~~~aGad~v~~~-~~~~~---~~~~~~~~~~~~~l~v~~-~v~t~~ea~~a~~~Gad~I~v~-g~~~~~~~~~~ 177 (310)
.+.++.+.++|+|.|.+. ..... .+.++.+++..+++++++ .+.+.++++.+.++|+|+|.+. |+... ...
T Consensus 233 ~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~Vg~g~Gs~-~~t-- 309 (496)
T 4fxs_A 233 EERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVGIGPGSI-CTT-- 309 (496)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEEEEECSHHHHHHHHHHTCSEEEECSSCCTT-BCH--
T ss_pred HHHHHHHHhccCceEEeccccccchHHHHHHHHHHHHCCCceEEEcccCcHHHHHHHHHhCCCEEEECCCCCcC-ccc--
Confidence 467888899999998742 22122 256666666555778777 4899999999999999999986 33211 100
Q ss_pred HHHHHHhhcceecccccCchhHHhhhccC-CCcHHHHHHHHhc---CCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEcc
Q 037779 178 VRHVRSVMGDIRVLRNMDDDEVFTFAKNI-AAPYDLVMQTKQL---GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGS 253 (310)
Q Consensus 178 ~~~~~~~~~~~~~l~~~~~d~~~~~~~~~-~~~~~l~~~i~~~---~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGs 253 (310)
+... +. .+.+..+..+.+. .++|| |++|||.+++|+.+++++|||+|++||
T Consensus 310 -----------r~~~------------g~g~p~~~~i~~v~~~~~~~~iPV--Ia~GGI~~~~di~kala~GAd~V~iGs 364 (496)
T 4fxs_A 310 -----------RIVT------------GVGVPQITAIADAAGVANEYGIPV--IADGGIRFSGDISKAIAAGASCVMVGS 364 (496)
T ss_dssp -----------HHHH------------CCCCCHHHHHHHHHHHHGGGTCCE--EEESCCCSHHHHHHHHHTTCSEEEEST
T ss_pred -----------cccc------------CCCccHHHHHHHHHHHhccCCCeE--EEeCCCCCHHHHHHHHHcCCCeEEecH
Confidence 0000 11 1234455555442 36899 789999999999999999999999999
Q ss_pred ccccCC
Q 037779 254 GVFKSG 259 (310)
Q Consensus 254 ai~~~~ 259 (310)
+|..++
T Consensus 365 ~f~~t~ 370 (496)
T 4fxs_A 365 MFAGTE 370 (496)
T ss_dssp TTTTBT
T ss_pred HHhcCC
Confidence 999865
No 87
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=98.90 E-value=1.3e-09 Score=103.42 Aligned_cols=166 Identities=25% Similarity=0.305 Sum_probs=101.5
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEe--eccccchHHHHH-HHHcCCCeee--
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMA--KARIGHFVEAQI-LEAIGVDYVD-- 119 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~--kd~i~~~~~~~~-~~~aGad~v~-- 119 (310)
.+.++.+.++|++++ .++ .|...++ ...+.++....+|+.+ +.+... ..+. ....|++...
T Consensus 139 ~~~~~~a~~~G~~ai-~it---~d~p~~g--------~r~~d~r~~~~~p~~~~~~~~~~~--~~~~~~~~~g~~~~~~v 204 (370)
T 1gox_A 139 AQLVRRAERAGFKAI-ALT---VDTPRLG--------RREADIKNRFVLPPFLTLKNFEGI--DLGKMDKANDSGLSSYV 204 (370)
T ss_dssp HHHHHHHHHTTCCEE-EEE---CSCSSCC--------CCHHHHHTTCCCCTTCCCGGGSSS--CCC---------HHHHH
T ss_pred HHHHHHHHHCCCCEE-EEe---CCCCccc--------ccHHHHHhccCCCcccchhhhhhh--hhhccccccCccHHHHH
Confidence 367999999999998 342 2222222 1344556666677543 222210 0000 0124444311
Q ss_pred ---ecCCCChhHHHHHHHhcCCCCcEEe-ecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccC
Q 037779 120 ---ESEVLTPADEENHINKHNFRVPFVC-GCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMD 195 (310)
Q Consensus 120 ---~~~~~~~~~~~~~~~~~~~~l~v~~-~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 195 (310)
.+..... +.++.+++. .++++++ .+.+.++++.+.+.|+|+|.+.+..+. .+.
T Consensus 205 ~~~~~~~~~~-~~i~~l~~~-~~~pv~vK~~~~~e~a~~a~~~Gad~I~vs~~ggr------------------~~~--- 261 (370)
T 1gox_A 205 AGQIDRSLSW-KDVAWLQTI-TSLPILVKGVITAEDARLAVQHGAAGIIVSNHGAR------------------QLD--- 261 (370)
T ss_dssp HHTBCTTCCH-HHHHHHHHH-CCSCEEEECCCSHHHHHHHHHTTCSEEEECCGGGT------------------SST---
T ss_pred HhhcCccchH-HHHHHHHHH-hCCCEEEEecCCHHHHHHHHHcCCCEEEECCCCCc------------------cCC---
Confidence 1112222 334555543 3688887 688999999999999999999643210 000
Q ss_pred chhHHhhhccCCCcHHHHHHHHhcC--CCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccC
Q 037779 196 DDEVFTFAKNIAAPYDLVMQTKQLG--RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKS 258 (310)
Q Consensus 196 ~d~~~~~~~~~~~~~~l~~~i~~~~--~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~ 258 (310)
.....++.+..+.+.. ++|| |++|||.+++|+.+++++|||+|++|++++.+
T Consensus 262 ---------~~~~~~~~l~~v~~~~~~~ipv--ia~GGI~~~~D~~k~l~~GAdaV~iGr~~l~~ 315 (370)
T 1gox_A 262 ---------YVPATIMALEEVVKAAQGRIPV--FLDGGVRRGTDVFKALALGAAGVFIGRPVVFS 315 (370)
T ss_dssp ---------TCCCHHHHHHHHHHHTTTSSCE--EEESSCCSHHHHHHHHHHTCSEEEECHHHHHH
T ss_pred ---------CcccHHHHHHHHHHHhCCCCEE--EEECCCCCHHHHHHHHHcCCCEEeecHHHHHH
Confidence 0123566677776654 7899 67999999999999999999999999999864
No 88
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.88 E-value=1.9e-08 Score=99.18 Aligned_cols=134 Identities=14% Similarity=0.144 Sum_probs=91.6
Q ss_pred hHHHHHHHHcCCCeeeec--CCCC--hhHHHHHHHhcCCCCcEEe-ecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHH
Q 037779 104 FVEAQILEAIGVDYVDES--EVLT--PADEENHINKHNFRVPFVC-GCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAV 178 (310)
Q Consensus 104 ~~~~~~~~~aGad~v~~~--~~~~--~~~~~~~~~~~~~~l~v~~-~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~ 178 (310)
.+.++.+.++|+|.|.++ ...+ ..+.++.+++..+++++++ ++.+.++++++.+.|+|+|.+. ...+++..
T Consensus 257 ~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~~~~pvi~~~v~t~~~a~~l~~aGad~I~vg-~~~G~~~~--- 332 (514)
T 1jcn_A 257 KYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAGVDGLRVG-MGCGSICI--- 332 (514)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEEC-SSCSCCBT---
T ss_pred HHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhCCCCceEecccchHHHHHHHHHcCCCEEEEC-CCCCcccc---
Confidence 356678888999999842 2212 2356666766434788887 6999999999999999999883 21111100
Q ss_pred HHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccC
Q 037779 179 RHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKS 258 (310)
Q Consensus 179 ~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~ 258 (310)
.+....... ........+..+.+..++|| |++|||.++.++.+++++|||+|++|++|+.+
T Consensus 333 ---------t~~~~~~g~--------~~~~~~~~~~~~~~~~~ipV--ia~GGI~~~~di~kala~GAd~V~iG~~~l~~ 393 (514)
T 1jcn_A 333 ---------TQEVMACGR--------PQGTAVYKVAEYARRFGVPI--IADGGIQTVGHVVKALALGASTVMMGSLLAAT 393 (514)
T ss_dssp ---------TBCCCSCCC--------CHHHHHHHHHHHHGGGTCCE--EEESCCCSHHHHHHHHHTTCSEEEESTTTTTS
T ss_pred ---------cccccCCCc--------cchhHHHHHHHHHhhCCCCE--EEECCCCCHHHHHHHHHcCCCeeeECHHHHcC
Confidence 000000000 00123556666766668999 67899999999999999999999999999986
Q ss_pred CC
Q 037779 259 GD 260 (310)
Q Consensus 259 ~d 260 (310)
++
T Consensus 394 ~e 395 (514)
T 1jcn_A 394 TE 395 (514)
T ss_dssp TT
T ss_pred Cc
Confidence 53
No 89
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=98.87 E-value=1.5e-08 Score=93.40 Aligned_cols=75 Identities=13% Similarity=0.129 Sum_probs=53.9
Q ss_pred cHHHHHHHHhcC--CCCEEEEccCCCCCHHHHHHHHHcCCCEEEEcccccc-CCCHHHHHHHHHHHHHcCCChhhHHhhh
Q 037779 209 PYDLVMQTKQLG--RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFK-SGDPVRRARAIVQAVTNYSDPDVLAEVS 285 (310)
Q Consensus 209 ~~~l~~~i~~~~--~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~-~~dp~~~~~~~~~~~~~~~~~~~~~~~~ 285 (310)
.++.++.+++.. ++|| |+.|||.|++|+.+++++|||+|++||+++. .++ ..+++.+.+..+.....+..++
T Consensus 228 ~~~~i~~v~~~~~~~ipv--i~~GGI~~~~da~~~l~~GAd~V~vg~~~l~~~p~---~~~~i~~~l~~~l~~~g~~si~ 302 (311)
T 1jub_A 228 ALANVRAFYTRLKPEIQI--IGTGGIETGQDAFEHLLCGATMLQIGTALHKEGPA---IFDRIIKELEEIMNQKGYQSIA 302 (311)
T ss_dssp HHHHHHHHHTTSCTTSEE--EEESSCCSHHHHHHHHHHTCSEEEECHHHHHHCTH---HHHHHHHHHHHHHHHHTCCSGG
T ss_pred HHHHHHHHHHhcCCCCCE--EEECCCCCHHHHHHHHHcCCCEEEEchHHHhcCcH---HHHHHHHHHHHHHHHcCCCCHH
Confidence 356778888766 7999 6789999999999999999999999999996 654 3444444444443334444444
Q ss_pred hcc
Q 037779 286 CGL 288 (310)
Q Consensus 286 ~~~ 288 (310)
+..
T Consensus 303 e~~ 305 (311)
T 1jub_A 303 DFH 305 (311)
T ss_dssp GTT
T ss_pred HHh
Confidence 433
No 90
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=98.86 E-value=2.9e-08 Score=91.10 Aligned_cols=136 Identities=18% Similarity=0.193 Sum_probs=91.1
Q ss_pred HHHHHHHcCCCeeeecCCC-C--hhH----HHHHHHh-cCCCCcEEeec-------CCHH----HHHHHHHhCCCEEEEe
Q 037779 106 EAQILEAIGVDYVDESEVL-T--PAD----EENHINK-HNFRVPFVCGC-------RNLG----ESLRRIREGAAMIRTK 166 (310)
Q Consensus 106 ~~~~~~~aGad~v~~~~~~-~--~~~----~~~~~~~-~~~~l~v~~~v-------~t~~----ea~~a~~~Gad~I~v~ 166 (310)
.++.+.+.|||.|...-.. + ..+ +.+.... +..++++++.. ++.+ .++.+.++|||+|++.
T Consensus 130 ~ve~Av~~GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~GlpvIie~~~G~~~~~d~e~i~~aariA~elGAD~VKt~ 209 (295)
T 3glc_A 130 SMDDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKTY 209 (295)
T ss_dssp CHHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHTTTCCEEEEECC----CCSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHCCCCEEEEEEECCCCcHHHHHHHHHHHHHHHHHcCCEEEEECCCCCccCCCHHHHHHHHHHHHHhCCCEEEeC
Confidence 5677889999998732111 1 111 2222222 34567777732 1322 3455668899999985
Q ss_pred cCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCH-----HHHHHH
Q 037779 167 GEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATP-----ADAAMM 241 (310)
Q Consensus 167 g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~-----~di~~~ 241 (310)
+++ +..+++.+..++|| +++||+.+. +.++.+
T Consensus 210 ---~t~--------------------------------------e~~~~vv~~~~vPV--v~~GG~~~~~~~~l~~v~~a 246 (295)
T 3glc_A 210 ---YVE--------------------------------------KGFERIVAGCPVPI--VIAGGKKLPEREALEMCWQA 246 (295)
T ss_dssp ---CCT--------------------------------------TTHHHHHHTCSSCE--EEECCSCCCHHHHHHHHHHH
T ss_pred ---CCH--------------------------------------HHHHHHHHhCCCcE--EEEECCCCCHHHHHHHHHHH
Confidence 111 01233444457899 458999743 357788
Q ss_pred HHcCCCEEEEccccccCCCHHHHHHHHHHHHHcCCChhhHHhh
Q 037779 242 MQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTNYSDPDVLAEV 284 (310)
Q Consensus 242 ~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~~~~~~~~~~~ 284 (310)
+++||+|+++|+.|++++||..+++++...++....+.-..++
T Consensus 247 i~aGA~Gv~vGRnI~q~~dp~~~~~al~~ivh~~~s~~eA~~~ 289 (295)
T 3glc_A 247 IDQGASGVDMGRNIFQSDHPVAMMKAVQAVVHHNETADRAYEL 289 (295)
T ss_dssp HHTTCSEEEESHHHHTSSSHHHHHHHHHHHHHHCCCHHHHHHH
T ss_pred HHhCCeEEEeHHHHhcCcCHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 8999999999999999999999999999999988877555443
No 91
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=98.85 E-value=2.6e-08 Score=87.22 Aligned_cols=158 Identities=12% Similarity=0.107 Sum_probs=95.9
Q ss_pred hHHHHHHHhhc---CcceEeeccccchHHHHHHHHcCCCeeeecCCCCh---hHHHHHHHhcCCCCcEEe----ecCCHH
Q 037779 81 PQLIKQIKSSV---TIPVMAKARIGHFVEAQILEAIGVDYVDESEVLTP---ADEENHINKHNFRVPFVC----GCRNLG 150 (310)
Q Consensus 81 ~~~i~~i~~~~---~lPv~~kd~i~~~~~~~~~~~aGad~v~~~~~~~~---~~~~~~~~~~~~~l~v~~----~v~t~~ 150 (310)
+..++.+++.. .+++-+|........++.+.++|||.+..+..... ..+++.+++. +..+++ .++ ..
T Consensus 44 ~~~i~~l~~~~p~~~v~lD~kl~dip~t~~~~~~~~Gad~itvh~~~g~~~l~~~~~~~~~~--g~~~~~~ll~~~t-~~ 120 (216)
T 1q6o_A 44 VRAVRDLKALYPHKIVLADAKIADAGKILSRMCFEANADWVTVICCADINTAKGALDVAKEF--NGDVQIELTGYWT-WE 120 (216)
T ss_dssp THHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHT--TCEEEEEECSCCC-HH
T ss_pred HHHHHHHHHhCCCCeEEEEEEecccHHHHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHHc--CCCceeeeeeCCC-hh
Confidence 67899998873 44444554422222345778899999875533332 2344444443 444332 332 34
Q ss_pred HHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcC--CCCEEEEc
Q 037779 151 ESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLG--RLPVVHFA 228 (310)
Q Consensus 151 ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~--~iPVv~ia 228 (310)
......+.|.+.+..+....+ + + .+.....+.++.+++.. ++|+ ++
T Consensus 121 ~~~~l~~~~~~~~vl~~a~~~------~----------------~--------~G~~g~~~~i~~lr~~~~~~~~i--~v 168 (216)
T 1q6o_A 121 QAQQWRDAGIGQVVYHRSRDA------Q----------------A--------AGVAWGEADITAIKRLSDMGFKV--TV 168 (216)
T ss_dssp HHHHHHHTTCCEEEEECCHHH------H----------------H--------TTCCCCHHHHHHHHHHHHTTCEE--EE
T ss_pred hHHHHHhcCcHHHHHHHHHHH------H----------------h--------cCCCCCHHHHHHHHHhcCCCCcE--EE
Confidence 445555567765555311000 0 0 01111123334443322 5667 45
Q ss_pred cCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHc
Q 037779 229 AGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTN 274 (310)
Q Consensus 229 ~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~ 274 (310)
.|||+ ++++.+++++|||++++||+|++++||.+.+++|++.++.
T Consensus 169 ~GGI~-~~~~~~~~~aGad~ivvG~~I~~a~dp~~~~~~~~~~i~~ 213 (216)
T 1q6o_A 169 TGGLA-LEDLPLFKGIPIHVFIAGRSIRDAASPVEAARQFKRSIAE 213 (216)
T ss_dssp ESSCC-GGGGGGGTTSCCSEEEESHHHHTSSCHHHHHHHHHHHHHH
T ss_pred ECCcC-hhhHHHHHHcCCCEEEEeehhcCCCCHHHHHHHHHHHHHh
Confidence 79996 9999999999999999999999999999999999888764
No 92
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=98.83 E-value=3.2e-08 Score=87.43 Aligned_cols=59 Identities=29% Similarity=0.359 Sum_probs=49.6
Q ss_pred cHHHHHHHHhcC-CCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHH
Q 037779 209 PYDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVT 273 (310)
Q Consensus 209 ~~~l~~~i~~~~-~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~ 273 (310)
+.++++.+++.. ++|+ +++|||+|++++++++ .|||+|+|||++++ || +.++++.++++
T Consensus 167 ~~~~i~~i~~~~~~~Pv--~vGGGI~t~e~a~~~~-~gAD~VVVGSa~v~--~p-~~~~~~v~a~~ 226 (228)
T 3vzx_A 167 DIEAVKKTKAVLETSTL--FYGGGIKDAETAKQYA-EHADVIVVGNAVYE--DF-DRALKTVAAVK 226 (228)
T ss_dssp CHHHHHHHHHHCSSSEE--EEESSCCSHHHHHHHH-TTCSEEEECTHHHH--CH-HHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCCCE--EEeCCCCCHHHHHHHH-hCCCEEEEChHHhc--CH-HHHHHHHHHHh
Confidence 678889998877 7899 6799999999999998 69999999999999 33 45666666664
No 93
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=98.82 E-value=6.5e-08 Score=108.20 Aligned_cols=194 Identities=11% Similarity=0.111 Sum_probs=131.5
Q ss_pred cCCCHHHHHHHHHcCCcEEE-ecccccchhhhcCCCCCCCChHHHHHHHhhc--CcceEeecccc-ch------HHHHHH
Q 037779 41 DVVTPEQARIAEEAGACAVM-ALERVPADIRAQGGVARMSDPQLIKQIKSSV--TIPVMAKARIG-HF------VEAQIL 110 (310)
Q Consensus 41 ~~~~~~~a~~~~~~Ga~~I~-~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~--~lPv~~kd~i~-~~------~~~~~~ 110 (310)
.+.++++|.++.++|.-++. -....+ +... .+.|+++++.. +.|+.++.+.- .. +.++.+
T Consensus 593 ~vs~~~LaaAva~aGglG~i~g~g~~~--~e~l--------~~~i~~vk~~~~~~~p~gvN~~~~~p~~~~~~~~~~~~~ 662 (2060)
T 2uva_G 593 TTVPWDFVAATMNAGYHIELAGGGYYN--AQKM--------SDAISKIEKAIPPGRGITVNLIYVNPRAMGWQIPLLGRL 662 (2060)
T ss_dssp TTCSHHHHHHHHHTTCEECEEGGGCCS--HHHH--------HHHHHHHGGGSCTTCCEEEEEETTCTTHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHCCCEEEECcCCCCC--HHHH--------HHHHHHHHhhcccCCCeEecccccCcccchhHHHHHHHH
Confidence 46678999999999998863 111111 1111 34577778777 68998886652 11 345777
Q ss_pred HHcCCCe--eeecCCC-ChhHHHHHHHhcCCCCcEEeecCCHHHHHHH----HHhCCCEEE---EecCCCCCchHHHHHH
Q 037779 111 EAIGVDY--VDESEVL-TPADEENHINKHNFRVPFVCGCRNLGESLRR----IREGAAMIR---TKGEAGTGNIVEAVRH 180 (310)
Q Consensus 111 ~~aGad~--v~~~~~~-~~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a----~~~Gad~I~---v~g~~~~~~~~~~~~~ 180 (310)
.+.|++. |...... +.+++.+.++.+ ++.++..+.+..++.++ .+.|+|++. +.|...+|+.
T Consensus 663 ~~~gv~i~gv~~~~G~p~~e~~~~~l~~~--gi~~i~~v~~~~~a~~~v~~l~~aG~D~iV~~q~~G~eaGGH~------ 734 (2060)
T 2uva_G 663 RADGVPIEGLTIGAGVPSIEVANEYIQTL--GIRHISFKPGSVDAIQQVINIAKANPTFPIILQWTGGRGGGHH------ 734 (2060)
T ss_dssp HTTTCCEEEEEEESSCCCHHHHHHHHHHS--CCSEEEECCCSHHHHHHHHHHHHHCTTSCEEEEECCTTSSSSC------
T ss_pred HHcCCCcceEeecCCCCCHHHHHHHHHHc--CCeEEEecCCHHHHHHHHHHHHHcCCCEEEEeeeEcccCCCCC------
Confidence 8899999 7655443 334577777765 57777777788888777 789999887 6665444431
Q ss_pred HHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHH-----------HcCCCEE
Q 037779 181 VRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMM-----------QLGCDGV 249 (310)
Q Consensus 181 ~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~-----------~~GadgV 249 (310)
....+ . .....+++.+++..++|| |++|||.+++++.+++ .+|||||
T Consensus 735 ---------g~~d~-~----------~~~l~lv~~i~~~~~ipv--iaaGGI~~g~~i~aaltg~ws~~~g~palGAdgV 792 (2060)
T 2uva_G 735 ---------SFEDF-H----------QPILLMYSRIRKCSNIVL--VAGSGFGGSEDTYPYLTGSWSTKFGYPPMPFDGC 792 (2060)
T ss_dssp ---------CSCCS-H----------HHHHHHHHHHHTSTTEEE--EEESSCCSHHHHHHHHHTCGGGTTTSCCCCCSCE
T ss_pred ---------Ccccc-c----------chHHHHHHHHHHHcCCCE--EEeCCCCCHHHHHHHhcCcchhhcCCCCCCCCEE
Confidence 00000 0 113568888888777888 7899999999999999 9999999
Q ss_pred EEccccccCCCHHHHHHHHHHHHHcC
Q 037779 250 FVGSGVFKSGDPVRRARAIVQAVTNY 275 (310)
Q Consensus 250 ~VGsai~~~~dp~~~~~~~~~~~~~~ 275 (310)
++||.|+.+..- .....+++++.+.
T Consensus 793 ~~GT~f~~t~Ea-~~s~~~K~~lv~a 817 (2060)
T 2uva_G 793 MFGSRMMTAKEA-HTSKQAKQAIVDA 817 (2060)
T ss_dssp EESGGGGGBTTS-CCCHHHHHHHHTS
T ss_pred EEchhhhcCcCC-CCCHHHHHHHHhC
Confidence 999999997641 1234455555443
No 94
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=98.82 E-value=3e-08 Score=96.90 Aligned_cols=126 Identities=17% Similarity=0.222 Sum_probs=90.5
Q ss_pred hHHHHHHHHcCCCeeeec--CC--CChhHHHHHHHhcCCCCcEEee-cCCHHHHHHHHHhCCCEEEEe-cC--CCCCchH
Q 037779 104 FVEAQILEAIGVDYVDES--EV--LTPADEENHINKHNFRVPFVCG-CRNLGESLRRIREGAAMIRTK-GE--AGTGNIV 175 (310)
Q Consensus 104 ~~~~~~~~~aGad~v~~~--~~--~~~~~~~~~~~~~~~~l~v~~~-v~t~~ea~~a~~~Gad~I~v~-g~--~~~~~~~ 175 (310)
++.++.+.++|+|.+.+. .. ....+.++.+++..+++.++++ +-|.+.++..++.|||.|+|. |+ .++..
T Consensus 283 ~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~~p~~~viaGNVaT~e~a~~Li~aGAD~vkVGiGpGSiCtTr-- 360 (556)
T 4af0_A 283 KDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIAGNVVTREQAAQLIAAGADGLRIGMGSGSICITQ-- 360 (556)
T ss_dssp HHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTBCCT--
T ss_pred HHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHhhCCcceEEeccccCHHHHHHHHHcCCCEEeecCCCCcccccc--
Confidence 467788999999998732 22 2345677777777788888885 889999999999999999986 44 23321
Q ss_pred HHHHHHHHhhcceecccccCchhHHhhhccCCCc-HHHHHHH---HhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEE
Q 037779 176 EAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAP-YDLVMQT---KQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFV 251 (310)
Q Consensus 176 ~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~-~~l~~~i---~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~V 251 (310)
... +.+.| ...+..+ .+...+|| ||.|||.++.|+.+++.+|||.||+
T Consensus 361 --------------~v~------------GvG~PQ~tAi~~~a~~a~~~~vpv--IADGGI~~sGDi~KAlaaGAd~VMl 412 (556)
T 4af0_A 361 --------------EVM------------AVGRPQGTAVYAVAEFASRFGIPC--IADGGIGNIGHIAKALALGASAVMM 412 (556)
T ss_dssp --------------TTC------------CSCCCHHHHHHHHHHHHGGGTCCE--EEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred --------------ccc------------CCCCcHHHHHHHHHHHHHHcCCCE--EecCCcCcchHHHHHhhcCCCEEEE
Confidence 111 12222 1122222 22246899 7899999999999999999999999
Q ss_pred ccccccCC
Q 037779 252 GSGVFKSG 259 (310)
Q Consensus 252 Gsai~~~~ 259 (310)
||.|.+++
T Consensus 413 GsllAGt~ 420 (556)
T 4af0_A 413 GGLLAGTT 420 (556)
T ss_dssp STTTTTBT
T ss_pred chhhcccc
Confidence 99998864
No 95
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=98.81 E-value=2.5e-08 Score=88.30 Aligned_cols=47 Identities=21% Similarity=0.323 Sum_probs=42.5
Q ss_pred cHHHHHHHHhcC-CCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccC
Q 037779 209 PYDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKS 258 (310)
Q Consensus 209 ~~~l~~~i~~~~-~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~ 258 (310)
+.++++.+++.. ++|+ +++|||+++++++++.+ |||+|+|||+|++.
T Consensus 173 ~~~~v~~ir~~~~~~pv--~vGfGI~~~e~a~~~~~-gAD~VVVGSai~~~ 220 (235)
T 3w01_A 173 DVSKVQAVSEHLTETQL--FYGGGISSEQQATEMAA-IADTIIVGDIIYKD 220 (235)
T ss_dssp CHHHHHHHHTTCSSSEE--EEESCCCSHHHHHHHHT-TSSEEEECTHHHHC
T ss_pred CHHHHHHHHHhcCCCCE--EEECCcCCHHHHHHHHc-CCCEEEECCceecC
Confidence 678899998876 7899 67999999999999888 99999999999993
No 96
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=98.81 E-value=2.4e-08 Score=94.53 Aligned_cols=74 Identities=15% Similarity=0.187 Sum_probs=52.2
Q ss_pred cHHHHHHHHhcC--CCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccc-cCCCHHHHHHHHHHHHHcCCChhhHHhhh
Q 037779 209 PYDLVMQTKQLG--RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVF-KSGDPVRRARAIVQAVTNYSDPDVLAEVS 285 (310)
Q Consensus 209 ~~~l~~~i~~~~--~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~-~~~dp~~~~~~~~~~~~~~~~~~~~~~~~ 285 (310)
.++.++.+++.. ++|| |+.|||.|++|+.+++++|||+|++||+++ +.++ ..+++.+.+..+..-.++..++
T Consensus 284 a~~~v~~i~~~v~~~ipv--I~~GGI~s~~da~~~l~~GAd~V~vgra~l~~gP~---~~~~i~~~l~~~m~~~G~~~i~ 358 (367)
T 3zwt_A 284 STQTIREMYALTQGRVPI--IGVGGVSSGQDALEKIRAGASLVQLYTALTFWGPP---VVGKVKRELEALLKEQGFGGVT 358 (367)
T ss_dssp HHHHHHHHHHHTTTCSCE--EEESSCCSHHHHHHHHHHTCSEEEESHHHHHHCTH---HHHHHHHHHHHHHHHTTCSSHH
T ss_pred HHHHHHHHHHHcCCCceE--EEECCCCCHHHHHHHHHcCCCEEEECHHHHhcCcH---HHHHHHHHHHHHHHHcCCCCHH
Confidence 357778887765 7999 678999999999999999999999999994 5444 3344444444433333333343
Q ss_pred hc
Q 037779 286 CG 287 (310)
Q Consensus 286 ~~ 287 (310)
+.
T Consensus 359 e~ 360 (367)
T 3zwt_A 359 DA 360 (367)
T ss_dssp HH
T ss_pred Hh
Confidence 33
No 97
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=98.81 E-value=5.6e-08 Score=89.30 Aligned_cols=163 Identities=15% Similarity=0.168 Sum_probs=96.0
Q ss_pred HHHHh-hcCcceEeeccccchH---H-HHHHHH-cCCCeeeecCC------------CCh---hHHHHHHHhcCCCCcEE
Q 037779 85 KQIKS-SVTIPVMAKARIGHFV---E-AQILEA-IGVDYVDESEV------------LTP---ADEENHINKHNFRVPFV 143 (310)
Q Consensus 85 ~~i~~-~~~lPv~~kd~i~~~~---~-~~~~~~-aGad~v~~~~~------------~~~---~~~~~~~~~~~~~l~v~ 143 (310)
+.+++ ..+.|+.++.+....+ . ++.+.+ +|+|.|.++-. ..+ .++++.+++. .+++++
T Consensus 90 ~~~~~~~~~~p~~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~-~~~pv~ 168 (311)
T 1ep3_A 90 PWLNENFPELPIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAV-SKVPLY 168 (311)
T ss_dssp HHHHHHCTTSCEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHH-CSSCEE
T ss_pred HHHHhcCCCCcEEEEEcCCCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHh-cCCCEE
Confidence 34554 3378998876554222 2 234444 89998853210 122 3444555442 256666
Q ss_pred e----ecCCHHH-HHHHHHhCCCEEEEecCCCCCch-HHHHHHHHHhhcceecc----cccCchhHHhhhccCCCcHHHH
Q 037779 144 C----GCRNLGE-SLRRIREGAAMIRTKGEAGTGNI-VEAVRHVRSVMGDIRVL----RNMDDDEVFTFAKNIAAPYDLV 213 (310)
Q Consensus 144 ~----~v~t~~e-a~~a~~~Gad~I~v~g~~~~~~~-~~~~~~~~~~~~~~~~l----~~~~~d~~~~~~~~~~~~~~l~ 213 (310)
+ ++.+..+ ++.+.+.|+|+|.+.+...+..+ .++ .. ..+ ...+... ......+++
T Consensus 169 vk~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~--------~~-~~~~~~~~g~~g~~------~~~~~~~~i 233 (311)
T 1ep3_A 169 VKLSPNVTDIVPIAKAVEAAGADGLTMINTLMGVRFDLKT--------RQ-PILANITGGLSGPA------IKPVALKLI 233 (311)
T ss_dssp EEECSCSSCSHHHHHHHHHTTCSEEEECCCEEECCBCTTT--------CS-BSSTTSCEEEESGG------GHHHHHHHH
T ss_pred EEECCChHHHHHHHHHHHHcCCCEEEEeCCCcccccCccc--------CC-ccccCCCCcccCcc------chHHHHHHH
Confidence 6 4446556 67778899999988532111000 000 00 000 0000000 000124677
Q ss_pred HHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHH
Q 037779 214 MQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRA 265 (310)
Q Consensus 214 ~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~ 265 (310)
+.+++..++|| |++|||.+++++.+++++|||+|++||+++..++....+
T Consensus 234 ~~i~~~~~ipv--ia~GGI~~~~d~~~~l~~GAd~V~vg~~~l~~p~~~~~i 283 (311)
T 1ep3_A 234 HQVAQDVDIPI--IGMGGVANAQDVLEMYMAGASAVAVGTANFADPFVCPKI 283 (311)
T ss_dssp HHHHTTCSSCE--EECSSCCSHHHHHHHHHHTCSEEEECTHHHHCTTHHHHH
T ss_pred HHHHHhcCCCE--EEECCcCCHHHHHHHHHcCCCEEEECHHHHcCcHHHHHH
Confidence 78887778999 679999999999999999999999999999977655444
No 98
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=98.79 E-value=5.1e-08 Score=92.28 Aligned_cols=98 Identities=20% Similarity=0.285 Sum_probs=72.8
Q ss_pred HHHHHHHhcCCCCcEEe-ecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccC
Q 037779 128 DEENHINKHNFRVPFVC-GCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNI 206 (310)
Q Consensus 128 ~~~~~~~~~~~~l~v~~-~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~ 206 (310)
+.++.+++. .++++++ ++.+.++++++.+.|+|+|.+++..+. .+. .-
T Consensus 219 ~~i~~lr~~-~~~PvivK~v~~~e~a~~a~~~Gad~I~vs~~ggr------------------~~~------------~g 267 (368)
T 2nli_A 219 RDIEEIAGH-SGLPVFVKGIQHPEDADMAIKRGASGIWVSNHGAR------------------QLY------------EA 267 (368)
T ss_dssp HHHHHHHHH-SSSCEEEEEECSHHHHHHHHHTTCSEEEECCGGGT------------------SCS------------SC
T ss_pred HHHHHHHHH-cCCCEEEEcCCCHHHHHHHHHcCCCEEEEcCCCcC------------------CCC------------CC
Confidence 345566553 2567666 578999999999999999999754221 000 01
Q ss_pred CCcHHHHHHHHhcC--CCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccC
Q 037779 207 AAPYDLVMQTKQLG--RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKS 258 (310)
Q Consensus 207 ~~~~~l~~~i~~~~--~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~ 258 (310)
..+++.+..+++.. ++|| |++|||.+++|+.+++.+|||+|++|+.++.+
T Consensus 268 ~~~~~~l~~v~~~v~~~ipV--ia~GGI~~g~D~~kalalGAd~V~iGr~~l~~ 319 (368)
T 2nli_A 268 PGSFDTLPAIAERVNKRVPI--VFDSGVRRGEHVAKALASGADVVALGRPVLFG 319 (368)
T ss_dssp CCHHHHHHHHHHHHTTSSCE--EECSSCCSHHHHHHHHHTTCSEEEECHHHHHH
T ss_pred CChHHHHHHHHHHhCCCCeE--EEECCCCCHHHHHHHHHcCCCEEEECHHHHHH
Confidence 23566777776643 6899 78999999999999999999999999998874
No 99
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=98.79 E-value=2.3e-08 Score=94.43 Aligned_cols=46 Identities=20% Similarity=0.468 Sum_probs=37.5
Q ss_pred HHHHHHHHhc-CCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEcccccc
Q 037779 210 YDLVMQTKQL-GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 210 ~~l~~~i~~~-~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~ 257 (310)
.+.+..+... .++|| |++|||.++.|+.+++.+|||+|++|++++.
T Consensus 266 ~~~L~~v~~~~~~ipv--ia~GGI~~g~Dv~KaLalGAdaV~ig~~~l~ 312 (365)
T 3sr7_A 266 AQVLLNAQPLMDKVEI--LASGGIRHPLDIIKALVLGAKAVGLSRTMLE 312 (365)
T ss_dssp HHHHHHHGGGTTTSEE--EECSSCCSHHHHHHHHHHTCSEEEESHHHHH
T ss_pred HHHHHHHHHhcCCCeE--EEeCCCCCHHHHHHHHHcCCCEEEECHHHHH
Confidence 3444445443 26888 7899999999999999999999999999986
No 100
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=98.77 E-value=9.5e-09 Score=94.96 Aligned_cols=53 Identities=25% Similarity=0.228 Sum_probs=44.7
Q ss_pred HHHHHHHHhcC-CCCEEEEccCCCCCHHHHHHHHHcCCCEEEEcccccc-CCCHHHH
Q 037779 210 YDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFK-SGDPVRR 264 (310)
Q Consensus 210 ~~l~~~i~~~~-~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~-~~dp~~~ 264 (310)
++.++.+++.. ++|| |+.|||.|++|+.+++++|||+|++||+++. .++....
T Consensus 232 ~~~i~~v~~~~~~ipv--i~~GGI~~~~da~~~l~~GAd~V~ig~~~l~~~p~~~~~ 286 (314)
T 2e6f_A 232 LANVNAFYRRCPDKLV--FGCGGVYSGEDAFLHILAGASMVQVGTALQEEGPGIFTR 286 (314)
T ss_dssp HHHHHHHHHHCTTSEE--EEESSCCSHHHHHHHHHHTCSSEEECHHHHHHCTTHHHH
T ss_pred HHHHHHHHHhcCCCCE--EEECCCCCHHHHHHHHHcCCCEEEEchhhHhcCcHHHHH
Confidence 56777777766 8999 6789999999999999999999999999995 7664433
No 101
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.77 E-value=1.2e-07 Score=92.91 Aligned_cols=129 Identities=19% Similarity=0.263 Sum_probs=86.5
Q ss_pred hHHHHHHHHcCCCeeeec--CCCC--hhHHHHHHHhcCCCCcEEe-ecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHH
Q 037779 104 FVEAQILEAIGVDYVDES--EVLT--PADEENHINKHNFRVPFVC-GCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAV 178 (310)
Q Consensus 104 ~~~~~~~~~aGad~v~~~--~~~~--~~~~~~~~~~~~~~l~v~~-~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~ 178 (310)
.+.+..+.++|+|.+.++ .... ..+.++.+++..+++++++ .+.+.++++.+.+.|+|+|.+.+..++....
T Consensus 239 ~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~p~~pvi~g~~~t~e~a~~l~~~G~d~I~v~~~~G~~~~~--- 315 (494)
T 1vrd_A 239 MERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVAGNVATPEGTEALIKAGADAVKVGVGPGSICTT--- 315 (494)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTSCEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTCHH---
T ss_pred HHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHHCCCceEEeCCcCCHHHHHHHHHcCCCEEEEcCCCCccccc---
Confidence 356778888999998742 2222 3455666666434677665 4889999999999999999985332221100
Q ss_pred HHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhc---CCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEcccc
Q 037779 179 RHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQL---GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGV 255 (310)
Q Consensus 179 ~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~---~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai 255 (310)
+.+... . .+....+..+.+. .++|| |++|||.++.++.+++++|||+|++|++|
T Consensus 316 ----------~~~~~~----------g-~p~~~~l~~v~~~~~~~~ipv--ia~GGI~~~~di~kala~GAd~V~iGr~~ 372 (494)
T 1vrd_A 316 ----------RVVAGV----------G-VPQLTAVMECSEVARKYDVPI--IADGGIRYSGDIVKALAAGAESVMVGSIF 372 (494)
T ss_dssp ----------HHHHCC----------C-CCHHHHHHHHHHHHHTTTCCE--EEESCCCSHHHHHHHHHTTCSEEEESHHH
T ss_pred ----------cccCCC----------C-ccHHHHHHHHHHHHhhcCCCE--EEECCcCCHHHHHHHHHcCCCEEEECHHH
Confidence 000000 0 1223344444332 47899 77999999999999999999999999999
Q ss_pred ccC
Q 037779 256 FKS 258 (310)
Q Consensus 256 ~~~ 258 (310)
+.+
T Consensus 373 l~~ 375 (494)
T 1vrd_A 373 AGT 375 (494)
T ss_dssp HTB
T ss_pred hcC
Confidence 753
No 102
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=98.76 E-value=1.7e-07 Score=89.37 Aligned_cols=143 Identities=17% Similarity=0.217 Sum_probs=89.4
Q ss_pred HHHHhhcCcceEeecccc-chHHHHHHHHcCCCeeeec--C----CC----ChhHHHHHHHhcCCCCcEEe-ecCCHHHH
Q 037779 85 KQIKSSVTIPVMAKARIG-HFVEAQILEAIGVDYVDES--E----VL----TPADEENHINKHNFRVPFVC-GCRNLGES 152 (310)
Q Consensus 85 ~~i~~~~~lPv~~kd~i~-~~~~~~~~~~aGad~v~~~--~----~~----~~~~~~~~~~~~~~~l~v~~-~v~t~~ea 152 (310)
+++++. +.|++++.... ..+.++.+.++|+|.+..+ . .. +..++ ..+.+. .++++++ .+.|.+++
T Consensus 149 ~~~~~~-g~~v~~~v~~~~~~e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i-~~l~~~-~~~pvi~ggi~t~e~a 225 (393)
T 2qr6_A 149 AQVRDS-GEIVAVRVSPQNVREIAPIVIKAGADLLVIQGTLISAEHVNTGGEALNL-KEFIGS-LDVPVIAGGVNDYTTA 225 (393)
T ss_dssp HHHHHT-TSCCEEEECTTTHHHHHHHHHHTTCSEEEEECSSCCSSCCCC-----CH-HHHHHH-CSSCEEEECCCSHHHH
T ss_pred HHHhhc-CCeEEEEeCCccHHHHHHHHHHCCCCEEEEeCCccccccCCCcccHHHH-HHHHHh-cCCCEEECCcCCHHHH
Confidence 344443 67777654332 2345567778999987532 1 11 22333 334332 3677777 68899999
Q ss_pred HHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhc-------C---CC
Q 037779 153 LRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQL-------G---RL 222 (310)
Q Consensus 153 ~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~-------~---~i 222 (310)
+++.+.|+|.|.+. ....+. +.+... + .+..+.+..+.+. . ++
T Consensus 226 ~~~~~~Gad~i~vg-~Gg~~~---------------~~~~~~----------g-~~~~~~l~~v~~~~~~~~~~~~~~~i 278 (393)
T 2qr6_A 226 LHMMRTGAVGIIVG-GGENTN---------------SLALGM----------E-VSMATAIADVAAARRDYLDETGGRYV 278 (393)
T ss_dssp HHHHTTTCSEEEES-CCSCCH---------------HHHTSC----------C-CCHHHHHHHHHHHHHHHHHHHTSCCC
T ss_pred HHHHHcCCCEEEEC-CCcccc---------------cccCCC----------C-CChHHHHHHHHHHHHHhHhhcCCcce
Confidence 99999999999983 321110 001110 0 1234444433332 2 28
Q ss_pred CEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCC
Q 037779 223 PVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSG 259 (310)
Q Consensus 223 PVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~ 259 (310)
|| |++|||.++.|+.+++.+||++|++|++|+.+.
T Consensus 279 pv--ia~GGI~~~~dv~kalalGA~~V~iG~~~l~~~ 313 (393)
T 2qr6_A 279 HI--IADGSIENSGDVVKAIACGADAVVLGSPLARAE 313 (393)
T ss_dssp EE--EECSSCCSHHHHHHHHHHTCSEEEECGGGGGST
T ss_pred EE--EEECCCCCHHHHHHHHHcCCCEEEECHHHHcCC
Confidence 99 789999999999999999999999999997754
No 103
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=98.75 E-value=9.2e-08 Score=89.71 Aligned_cols=96 Identities=20% Similarity=0.352 Sum_probs=71.7
Q ss_pred HHHHHHhcCCCCcEEe-ecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCC
Q 037779 129 EENHINKHNFRVPFVC-GCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIA 207 (310)
Q Consensus 129 ~~~~~~~~~~~l~v~~-~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~ 207 (310)
.++.+++. .++++++ .+.+.++++++.+.|+|.|.+.+..++. + + ...
T Consensus 208 ~i~~lr~~-~~~PvivK~v~~~e~A~~a~~~GaD~I~vsn~GG~~------------------~---d---------~~~ 256 (352)
T 3sgz_A 208 DLSLLQSI-TRLPIILKGILTKEDAELAMKHNVQGIVVSNHGGRQ------------------L---D---------EVS 256 (352)
T ss_dssp HHHHHHHH-CCSCEEEEEECSHHHHHHHHHTTCSEEEECCGGGTS------------------S---C---------SSC
T ss_pred HHHHHHHh-cCCCEEEEecCcHHHHHHHHHcCCCEEEEeCCCCCc------------------c---C---------CCc
Confidence 45555543 3566665 4789999999999999999997653211 0 0 012
Q ss_pred CcHHHHHHHHhcC--CCCEEEEccCCCCCHHHHHHHHHcCCCEEEEcccccc
Q 037779 208 APYDLVMQTKQLG--RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 208 ~~~~l~~~i~~~~--~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~ 257 (310)
.+++.+..+.+.. ++|| |++|||.++.|+.+++.+||++|++|++++.
T Consensus 257 ~~~~~L~~i~~av~~~ipV--ia~GGI~~g~Dv~kaLalGA~aV~iGr~~l~ 306 (352)
T 3sgz_A 257 ASIDALREVVAAVKGKIEV--YMDGGVRTGTDVLKALALGARCIFLGRPILW 306 (352)
T ss_dssp CHHHHHHHHHHHHTTSSEE--EEESSCCSHHHHHHHHHTTCSEEEESHHHHH
T ss_pred cHHHHHHHHHHHhCCCCeE--EEECCCCCHHHHHHHHHcCCCEEEECHHHHH
Confidence 3566777776543 6899 6799999999999999999999999999885
No 104
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=98.75 E-value=1.1e-07 Score=82.78 Aligned_cols=148 Identities=18% Similarity=0.188 Sum_probs=92.6
Q ss_pred hHHHHHHHhh--cCcceEeecc--ccch-HHHHHHHHcCCCeeeecCCCChhHHHHHHHhcCCCCcEEeecCCHH--H--
Q 037779 81 PQLIKQIKSS--VTIPVMAKAR--IGHF-VEAQILEAIGVDYVDESEVLTPADEENHINKHNFRVPFVCGCRNLG--E-- 151 (310)
Q Consensus 81 ~~~i~~i~~~--~~lPv~~kd~--i~~~-~~~~~~~~aGad~v~~~~~~~~~~~~~~~~~~~~~l~v~~~v~t~~--e-- 151 (310)
++.++++++. +.+++-+|-. ..+. ..++.+.++|||.+..+.... .+.++.+++.+ ++.+..++.+.. +
T Consensus 40 ~~~i~~lr~~~~~~v~~D~kl~DI~~t~~~~v~~~~~~Gad~vtvh~~~g-~~~i~~~~~~~-gv~vl~~t~~~~~~~~~ 117 (208)
T 2czd_A 40 VDIIRRLKEETGVEIIADLKLADIPNTNRLIARKVFGAGADYVIVHTFVG-RDSVMAVKELG-EIIMVVEMSHPGALEFI 117 (208)
T ss_dssp TTHHHHHHHHHCCEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESTTC-HHHHHHHHTTS-EEEEECCCCSGGGGTTT
T ss_pred HHHHHHHHHcCCCEEEEEeeeCchHHHHHHHHHHHHhcCCCEEEEeccCC-HHHHHHHHHhC-CcEEEEecCCcchhhHH
Confidence 5688888887 4455555543 3332 234677789999987554333 34456666544 566655543321 1
Q ss_pred -------HHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCC-CC
Q 037779 152 -------SLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGR-LP 223 (310)
Q Consensus 152 -------a~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~-iP 223 (310)
+..+.+.|++.+.+... ..+.++.+++... -+
T Consensus 118 ~~~v~~~~~~a~~~G~~G~~~~~~----------------------------------------~~~~i~~lr~~~~~~~ 157 (208)
T 2czd_A 118 NPLTDRFIEVANEIEPFGVIAPGT----------------------------------------RPERIGYIRDRLKEGI 157 (208)
T ss_dssp GGGHHHHHHHHHHHCCSEEECCCS----------------------------------------STHHHHHHHHHSCTTC
T ss_pred HHHHHHHHHHHHHhCCcEEEECCC----------------------------------------ChHHHHHHHHhCCCCe
Confidence 23344556655543210 0112233443322 24
Q ss_pred EEEEccCCCCCHH--HHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHH
Q 037779 224 VVHFAAGGVATPA--DAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVT 273 (310)
Q Consensus 224 Vv~ia~GGI~t~~--di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~ 273 (310)
+ ++.|||+ ++ ++.+++++|+|.+++||+|++++||.+.++++++.++
T Consensus 158 ~--iv~gGI~-~~g~~~~~~~~aGad~vvvGr~I~~a~dp~~~~~~l~~~i~ 206 (208)
T 2czd_A 158 K--ILAPGIG-AQGGKAKDAVKAGADYIIVGRAIYNAPNPREAAKAIYDEIR 206 (208)
T ss_dssp E--EEECCCC-SSTTHHHHHHHHTCSEEEECHHHHTSSSHHHHHHHHHHHHC
T ss_pred E--EEECCCC-CCCCCHHHHHHcCCCEEEEChHHhcCCCHHHHHHHHHHHHh
Confidence 4 3579996 55 8999999999999999999999999999999988764
No 105
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=98.74 E-value=4.2e-08 Score=86.49 Aligned_cols=161 Identities=14% Similarity=0.101 Sum_probs=99.9
Q ss_pred hHHHHHHHhhc-CcceEe--eccccchHHHHHHHHcCCCeeeecCCCC---hhHHHHHHHhcC-CCCcEEeecCC---HH
Q 037779 81 PQLIKQIKSSV-TIPVMA--KARIGHFVEAQILEAIGVDYVDESEVLT---PADEENHINKHN-FRVPFVCGCRN---LG 150 (310)
Q Consensus 81 ~~~i~~i~~~~-~lPv~~--kd~i~~~~~~~~~~~aGad~v~~~~~~~---~~~~~~~~~~~~-~~l~v~~~v~t---~~ 150 (310)
++.++++++.. +.++.. |..-.....++.+.++|||.+..+.... ....++.+++.+ ....+.+++.| .+
T Consensus 46 ~~~v~~l~~~~p~~~iflDlKl~Dip~t~~~~~~~~Gad~vtVH~~~g~~~l~~a~~~~~~~g~~~~~~~Vt~lts~~~~ 125 (221)
T 3exr_A 46 SELVEVLRSLFPDKIIVADTKCADAGGTVAKNNAVRGADWMTCICSATIPTMKAARKAIEDINPDKGEIQVELYGDWTYD 125 (221)
T ss_dssp THHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHTTTCSEEEEETTSCHHHHHHHHHHHHHHCTTTCEEEEECCSSCCHH
T ss_pred HHHHHHHHHhCCCCcEEEEEEeeccHHHHHHHHHHcCCCEEEEeccCCHHHHHHHHHHHHhcCCCcceEEEEEcCCCCHH
Confidence 67899998864 545544 4331111234567789999976543322 234444454443 22455555433 55
Q ss_pred HHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhc--CCCCEEEEc
Q 037779 151 ESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQL--GRLPVVHFA 228 (310)
Q Consensus 151 ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~--~~iPVv~ia 228 (310)
++....+.+.+.+.++-. ... . .+ +...+.+-++.+++. .++++ .+
T Consensus 126 ~~~~~~~~~~~~~v~~~a-~~~--------------------~--~~-------Gvv~s~~e~~~ir~~~~~~~~i--~v 173 (221)
T 3exr_A 126 QAQQWLDAGISQAIYHQS-RDA--------------------L--LA-------GETWGEKDLNKVKKLIEMGFRV--SV 173 (221)
T ss_dssp HHHHHHHTTCCEEEEECC-HHH--------------------H--HH-------TCCCCHHHHHHHHHHHHHTCEE--EE
T ss_pred HHHHHHcCCHHHHHHHHH-Hhc--------------------C--CC-------ccccCHHHHHHHHHhhcCCceE--EE
Confidence 666666778888776511 100 0 01 111222333444442 24565 45
Q ss_pred cCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHc
Q 037779 229 AGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTN 274 (310)
Q Consensus 229 ~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~ 274 (310)
.||| +++++..+.++|||.+++||+|++++||.+.++++++.++.
T Consensus 174 ~gGI-~~~~~~~~~~aGad~~VvG~~I~~a~dp~~a~~~~~~~~~~ 218 (221)
T 3exr_A 174 TGGL-SVDTLKLFEGVDVFTFIAGRGITEAKNPAGAARAFKDEIKR 218 (221)
T ss_dssp ESSC-CGGGGGGGTTCCCSEEEECHHHHTSSSHHHHHHHHHHHHHH
T ss_pred ECCC-CHHHHHHHHHCCCCEEEECchhhCCCCHHHHHHHHHHHHHH
Confidence 7999 59999999999999999999999999999999999888763
No 106
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=98.74 E-value=9.4e-08 Score=89.63 Aligned_cols=76 Identities=16% Similarity=0.092 Sum_probs=55.5
Q ss_pred cHHHHHHHHhcC--CCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccc-cccCCCHHHHHHHHHHHHHcCCChhhHHhhh
Q 037779 209 PYDLVMQTKQLG--RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSG-VFKSGDPVRRARAIVQAVTNYSDPDVLAEVS 285 (310)
Q Consensus 209 ~~~l~~~i~~~~--~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsa-i~~~~dp~~~~~~~~~~~~~~~~~~~~~~~~ 285 (310)
.++.++.+++.. ++|| |+.|||.|++|+.+++++|||+|++|++ ++..++ .++++.+.++.+..-..+..++
T Consensus 261 a~~~v~~i~~~~~~~ipI--Ig~GGI~s~~da~~~l~aGAd~V~igra~~~~gP~---~~~~i~~~L~~~l~~~G~~si~ 335 (345)
T 3oix_A 261 ALANVHAFYKRLNPSIQI--IGTGGVXTGRDAFEHILCGASMVQIGTALHQEGPQ---IFKRITKELXAIMTEKGYETLE 335 (345)
T ss_dssp HHHHHHHHHTTSCTTSEE--EEESSCCSHHHHHHHHHHTCSEEEESHHHHHHCTH---HHHHHHHHHHHHHHHHTCCSGG
T ss_pred HHHHHHHHHHHcCCCCcE--EEECCCCChHHHHHHHHhCCCEEEEChHHHhcChH---HHHHHHHHHHHHHHHcCCCCHH
Confidence 367788888865 6899 6789999999999999999999999999 676544 3455555555444444444444
Q ss_pred hccC
Q 037779 286 CGLG 289 (310)
Q Consensus 286 ~~~~ 289 (310)
+..|
T Consensus 336 e~~G 339 (345)
T 3oix_A 336 DFRG 339 (345)
T ss_dssp GTTT
T ss_pred HHHh
Confidence 4444
No 107
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=98.74 E-value=1e-07 Score=91.22 Aligned_cols=128 Identities=16% Similarity=0.203 Sum_probs=85.4
Q ss_pred HHHHHHHHcCCCeeee-cCCCChh---HHHHHHHhcCCCCcEEe-ecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHH
Q 037779 105 VEAQILEAIGVDYVDE-SEVLTPA---DEENHINKHNFRVPFVC-GCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVR 179 (310)
Q Consensus 105 ~~~~~~~~aGad~v~~-~~~~~~~---~~~~~~~~~~~~l~v~~-~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~ 179 (310)
+.++.+.++|+|.|.+ .....+. ++++.+++...++++++ .+.+.++++.+.+.|+|+|.+. ... +.+...
T Consensus 156 ~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~~~~~pviv~~v~~~~~a~~a~~~Gad~I~vg-~~~-G~~~~~-- 231 (404)
T 1eep_A 156 ERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCLKVG-IGP-GSICTT-- 231 (404)
T ss_dssp HHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHTTTCSEEEEC-SSC-STTSHH--
T ss_pred HHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHHCCCCeEEEcCCCcHHHHHHHHhcCCCEEEEC-CCC-CcCcCc--
Confidence 4566778899999874 2122333 34455555433678886 7899999999999999999983 211 111000
Q ss_pred HHHHhhcceecccccCchhHHhhhccC-CCcHHHHHHHHh---cCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEcccc
Q 037779 180 HVRSVMGDIRVLRNMDDDEVFTFAKNI-AAPYDLVMQTKQ---LGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGV 255 (310)
Q Consensus 180 ~~~~~~~~~~~l~~~~~d~~~~~~~~~-~~~~~l~~~i~~---~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai 255 (310)
+... +. .+.++.+..+.+ ..++|| |++|||.+++|+.+++++|||+|++|++|
T Consensus 232 ---------~~~~------------~~g~p~~~~l~~v~~~~~~~~ipV--ia~GGI~~~~d~~~ala~GAd~V~iG~~~ 288 (404)
T 1eep_A 232 ---------RIVA------------GVGVPQITAICDVYEACNNTNICI--IADGGIRFSGDVVKAIAAGADSVMIGNLF 288 (404)
T ss_dssp ---------HHHH------------CCCCCHHHHHHHHHHHHTTSSCEE--EEESCCCSHHHHHHHHHHTCSEEEECHHH
T ss_pred ---------cccC------------CCCcchHHHHHHHHHHHhhcCceE--EEECCCCCHHHHHHHHHcCCCHHhhCHHH
Confidence 0000 11 113444455544 347899 67899999999999999999999999999
Q ss_pred ccCC
Q 037779 256 FKSG 259 (310)
Q Consensus 256 ~~~~ 259 (310)
+.++
T Consensus 289 l~~~ 292 (404)
T 1eep_A 289 AGTK 292 (404)
T ss_dssp HTBT
T ss_pred hcCC
Confidence 8754
No 108
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=98.73 E-value=5.1e-08 Score=96.05 Aligned_cols=98 Identities=22% Similarity=0.390 Sum_probs=70.2
Q ss_pred HHHHHHHhcCCCCcEEe-ecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccC
Q 037779 128 DEENHINKHNFRVPFVC-GCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNI 206 (310)
Q Consensus 128 ~~~~~~~~~~~~l~v~~-~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~ 206 (310)
+.++.+++. .++++++ .+.+.++++++.+.|+|+|.+.+..++. +.. .
T Consensus 333 ~~i~~lr~~-~~~PvivKgv~~~e~A~~a~~aGad~I~vs~hgG~~------------------~d~------------~ 381 (511)
T 1kbi_A 333 KDIEELKKK-TKLPIVIKGVQRTEDVIKAAEIGVSGVVLSNHGGRQ------------------LDF------------S 381 (511)
T ss_dssp HHHHHHHHH-CSSCEEEEEECSHHHHHHHHHTTCSEEEECCTTTTS------------------STT------------C
T ss_pred HHHHHHHHH-hCCcEEEEeCCCHHHHHHHHHcCCCEEEEcCCCCcc------------------CCC------------C
Confidence 345556553 2566666 4778899999999999999996543321 000 1
Q ss_pred CCcHHHHHHHHhcC-------CCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccC
Q 037779 207 AAPYDLVMQTKQLG-------RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKS 258 (310)
Q Consensus 207 ~~~~~l~~~i~~~~-------~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~ 258 (310)
..+++.+..+.+.. ++|| |++|||.++.|+.+++.+|||+|++|++++.+
T Consensus 382 ~~~~~~l~~v~~~v~~~~~~~~ipV--ia~GGI~~g~Dv~kaLalGAdaV~iGr~~l~~ 438 (511)
T 1kbi_A 382 RAPIEVLAETMPILEQRNLKDKLEV--FVDGGVRRGTDVLKALCLGAKGVGLGRPFLYA 438 (511)
T ss_dssp CCHHHHHHHHHHHHHTTTCBTTBEE--EEESSCCSHHHHHHHHHHTCSEEEECHHHHHH
T ss_pred CchHHHHHHHHHHHHhhccCCCcEE--EEECCCCCHHHHHHHHHcCCCEEEECHHHHHH
Confidence 12355555554432 6899 67999999999999999999999999998874
No 109
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=98.73 E-value=3.5e-08 Score=93.32 Aligned_cols=45 Identities=24% Similarity=0.275 Sum_probs=37.5
Q ss_pred HHHHHHHhcC-CCCEEEEccCCCCCHHHHHHHHHcCCCEEEEcccccc
Q 037779 211 DLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 211 ~l~~~i~~~~-~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~ 257 (310)
..+..+.+.. ++|| |++|||.++.|+.+++.+|||+|++|+.++.
T Consensus 256 ~~l~~v~~~~~~ipv--ia~GGI~~~~d~~kal~lGA~~v~ig~~~l~ 301 (368)
T 3vkj_A 256 ASIMEVRYSVPDSFL--VGSGGIRSGLDAAKAIALGADIAGMALPVLK 301 (368)
T ss_dssp HHHHHHHHHSTTCEE--EEESSCCSHHHHHHHHHHTCSEEEECHHHHH
T ss_pred HHHHHHHHHcCCCcE--EEECCCCCHHHHHHHHHcCCCEEEEcHHHHH
Confidence 3445555544 5888 7899999999999999999999999999885
No 110
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=98.73 E-value=5.6e-08 Score=92.72 Aligned_cols=98 Identities=20% Similarity=0.369 Sum_probs=71.2
Q ss_pred HHHHHHHhcCCCCcEEe-ecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccC
Q 037779 128 DEENHINKHNFRVPFVC-GCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNI 206 (310)
Q Consensus 128 ~~~~~~~~~~~~l~v~~-~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~ 206 (310)
+.++.+++. .++++++ .+.+.++++++.+.|+|.|.+.+..+.. .+ .-
T Consensus 242 ~~i~~lr~~-~~~PvivKgv~~~e~A~~a~~aGad~I~vs~~ggr~---------------------~~---------~g 290 (392)
T 2nzl_A 242 EDIKWLRRL-TSLPIVAKGILRGDDAREAVKHGLNGILVSNHGARQ---------------------LD---------GV 290 (392)
T ss_dssp HHHHHHC---CCSCEEEEEECCHHHHHHHHHTTCCEEEECCGGGTS---------------------ST---------TC
T ss_pred HHHHHHHHh-hCCCEEEEecCCHHHHHHHHHcCCCEEEeCCCCCCc---------------------CC---------CC
Confidence 335555542 3567776 5788999999999999999996432210 00 01
Q ss_pred CCcHHHHHHHHhcC--CCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccC
Q 037779 207 AAPYDLVMQTKQLG--RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKS 258 (310)
Q Consensus 207 ~~~~~l~~~i~~~~--~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~ 258 (310)
.++++.+..+.+.. ++|| |++|||.+++|+.+++.+|||+|++|++++.+
T Consensus 291 ~~~~~~l~~v~~av~~~ipV--ia~GGI~~g~Dv~kalalGAd~V~iGr~~l~~ 342 (392)
T 2nzl_A 291 PATIDVLPEIVEAVEGKVEV--FLDGGVRKGTDVLKALALGAKAVFVGRPIVWG 342 (392)
T ss_dssp CCHHHHHHHHHHHHTTSSEE--EECSSCCSHHHHHHHHHTTCSEEEECHHHHHH
T ss_pred cChHHHHHHHHHHcCCCCEE--EEECCCCCHHHHHHHHHhCCCeeEECHHHHHH
Confidence 23466667776543 5899 77999999999999999999999999999874
No 111
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=98.72 E-value=2.8e-07 Score=86.32 Aligned_cols=57 Identities=19% Similarity=0.200 Sum_probs=48.8
Q ss_pred cHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcC-CCEEEEccccccCCCHHHHHHH
Q 037779 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVFKSGDPVRRARA 267 (310)
Q Consensus 209 ~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~G-adgV~VGsai~~~~dp~~~~~~ 267 (310)
.+++++.+++..++|| |+.|||.+++++.++++.| ||.|++|++++..+|....+++
T Consensus 265 ~~~~~~~ik~~~~iPV--i~~GgI~s~e~a~~~L~~G~aD~V~iGR~~lanPdl~~ki~~ 322 (340)
T 3gr7_A 265 QVPFAELIRREADIPT--GAVGLITSGWQAEEILQNGRADLVFLGRELLRNPYWPYAAAR 322 (340)
T ss_dssp THHHHHHHHHHTTCCE--EEESSCCCHHHHHHHHHTTSCSEEEECHHHHHCTTHHHHHHH
T ss_pred cHHHHHHHHHHcCCcE--EeeCCCCCHHHHHHHHHCCCeeEEEecHHHHhCchHHHHHHH
Confidence 4677888888778999 6789999999999999998 9999999999998886655443
No 112
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=98.72 E-value=5.6e-08 Score=111.72 Aligned_cols=178 Identities=16% Similarity=0.207 Sum_probs=117.4
Q ss_pred CCCHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhc--CcceEeeccccc--h--------HHHHH
Q 037779 42 VVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSV--TIPVMAKARIGH--F--------VEAQI 109 (310)
Q Consensus 42 ~~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~--~lPv~~kd~i~~--~--------~~~~~ 109 (310)
..++++|.+..++|.-+..--.... ..... .+.|+++++.+ +.|+-++...-. + ..++.
T Consensus 439 ~s~~~LaaAVs~AGglG~l~~~g~~-~~~~l--------~~~i~~~r~~~~~~~p~~vNl~~~~p~~~~~~~g~~~~~~~ 509 (3089)
T 3zen_D 439 TVDAKIVAAAANAGHWAELAGGGQV-TEQIF--------NDRIAELETLLEPGRAIQFNTLFLDPYLWKLQVGGKRLVQR 509 (3089)
T ss_dssp HTSHHHHHHHHHTTCEEEECSTTCC-SHHHH--------HHHHHHHHHHSCTTCCCEEEEECSCHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHhCCCceeecCCCCC-CHHHH--------HHHHHHHHHhcCCCCceeechhhcChhhhhhccCHHHHHHH
Confidence 4468999999999998762110000 00011 34567777777 677766644321 1 34677
Q ss_pred HHHcC--CCeeeecCCCCh-hHHHHHHHh-cCCCCcEEe-ecCCHHHHHHHHHhCCC------EEEEecCCCCCchHHHH
Q 037779 110 LEAIG--VDYVDESEVLTP-ADEENHINK-HNFRVPFVC-GCRNLGESLRRIREGAA------MIRTKGEAGTGNIVEAV 178 (310)
Q Consensus 110 ~~~aG--ad~v~~~~~~~~-~~~~~~~~~-~~~~l~v~~-~v~t~~ea~~a~~~Gad------~I~v~g~~~~~~~~~~~ 178 (310)
+.+.| +|.|.....+++ ++....+.. +..|+.++. .+.|.++++++.+.|+| +|.+.|...+++..
T Consensus 510 ~~~~g~~vdgv~~~aG~P~~ee~~~~i~~l~~~Gi~~i~~~~~t~~~a~~~~~i~~d~~~~~y~vv~~G~eaGGH~g--- 586 (3089)
T 3zen_D 510 ARQSGAPIDGLVVSAGIPDLEEAVDIIDELNEVGISHVVFKPGTVEQIRSVIRIAAEVPTKPVIVHIEGGRAGGHHS--- 586 (3089)
T ss_dssp HHHTTCSCCEEEEESSCCCHHHHHHHHTSTTHHHHCSEEECCCSHHHHHHHHHHHTTSTTSCEEEEECCSSSSEECC---
T ss_pred HHHcCCCceEEEEeCCCCchhHhHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHhhhhcCCCcEEEEEeCCCcCCCCC---
Confidence 88899 777876655553 333333332 223454444 78899999999998888 67777765555410
Q ss_pred HHHHHhhcceecccccCchhHHhhhccCCCcHHHH----HHHHhcCCCCEEEEccCCCCCHHHHHHHH-----------H
Q 037779 179 RHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLV----MQTKQLGRLPVVHFAAGGVATPADAAMMM-----------Q 243 (310)
Q Consensus 179 ~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~----~~i~~~~~iPVv~ia~GGI~t~~di~~~~-----------~ 243 (310)
......++ ..+++..++|| |++|||.+++++..++ .
T Consensus 587 ---------------------------~~~~~~ll~~~~~~ir~~~~iPV--iaaGGI~d~~~vaaal~g~ws~~~~~p~ 637 (3089)
T 3zen_D 587 ---------------------------WEDLDDLLLATYSELRSRSNITI--CVGGGIGTPERSAEYLSGRWAEVHGYPL 637 (3089)
T ss_dssp ---------------------------SCCHHHHHHHHHHHHTTCTTEEE--EEESSCCCTTTTHHHHHTGGGGTTTCCC
T ss_pred ---------------------------cccHHHHHHHHHHHHhhcCCCeE--EEEeCCCCHHHHHHHhccccccccCccC
Confidence 01122333 66776677898 7899999999999999 9
Q ss_pred cCCCEEEEccccccCCC
Q 037779 244 LGCDGVFVGSGVFKSGD 260 (310)
Q Consensus 244 ~GadgV~VGsai~~~~d 260 (310)
+|||||+|||+|+.+..
T Consensus 638 lGAdGV~vGTrfl~t~E 654 (3089)
T 3zen_D 638 MPIDGILVGTAAMATLE 654 (3089)
T ss_dssp CCCSEEECSSTTTTCTT
T ss_pred CCCCEEEecHHHHhCcc
Confidence 99999999999999763
No 113
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=98.71 E-value=5.3e-08 Score=89.85 Aligned_cols=138 Identities=14% Similarity=0.120 Sum_probs=86.4
Q ss_pred HHHHHHHcCCCeee----ecCCCChh----HHHHHHHh-cCCCCcEEeecC----------C----HHH-HHHHHHhCCC
Q 037779 106 EAQILEAIGVDYVD----ESEVLTPA----DEENHINK-HNFRVPFVCGCR----------N----LGE-SLRRIREGAA 161 (310)
Q Consensus 106 ~~~~~~~aGad~v~----~~~~~~~~----~~~~~~~~-~~~~l~v~~~v~----------t----~~e-a~~a~~~Gad 161 (310)
.++.+.++|||.|- .....+.. .+.+.... +..++++++++. + ..+ ++.+.++|+|
T Consensus 113 ~ve~a~~~GAdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~lGaD 192 (304)
T 1to3_A 113 NAQAVKRDGAKALKLLVLWRSDEDAQQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDSGAD 192 (304)
T ss_dssp CHHHHHHTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTSSCS
T ss_pred hHHHHHHcCCCEEEEEEEcCCCccHHHHHHHHHHHHHHHHHcCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHcCCC
Confidence 56788999999985 11111111 22222222 346777776641 1 233 4556678999
Q ss_pred EEEEecCCCC-CchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCC-EEEEccCCCCCH----
Q 037779 162 MIRTKGEAGT-GNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLP-VVHFAAGGVATP---- 235 (310)
Q Consensus 162 ~I~v~g~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iP-Vv~ia~GGI~t~---- 235 (310)
++++..+.+. +. .+. ..+..+.....+++| | +++||+ ++
T Consensus 193 ~iKv~~~~~~~g~----------------------~~~----------~~~vv~~~~~~~~~P~V--v~aGG~-~~~~~~ 237 (304)
T 1to3_A 193 LYKVEMPLYGKGA----------------------RSD----------LLTASQRLNGHINMPWV--ILSSGV-DEKLFP 237 (304)
T ss_dssp EEEECCGGGGCSC----------------------HHH----------HHHHHHHHHHTCCSCEE--ECCTTS-CTTTHH
T ss_pred EEEeCCCcCCCCC----------------------HHH----------HHHHHHhccccCCCCeE--EEecCC-CHHHHH
Confidence 9998632110 00 000 011222222225789 7 568999 56
Q ss_pred HHHHHHHHcCCCEEEEccccccC----CCHHHHH--------HHHHHHHHcCCCh
Q 037779 236 ADAAMMMQLGCDGVFVGSGVFKS----GDPVRRA--------RAIVQAVTNYSDP 278 (310)
Q Consensus 236 ~di~~~~~~GadgV~VGsai~~~----~dp~~~~--------~~~~~~~~~~~~~ 278 (310)
+.++.+++.|++||+||++|+++ +||.+++ +++.+.++....|
T Consensus 238 ~~~~~a~~aGa~Gv~vGRaI~q~~~~~~dp~~~~~~~~~~~~~~l~~iv~~~~~~ 292 (304)
T 1to3_A 238 RAVRVAMEAGASGFLAGRAVWSSVIGLPDTELMLRDVSAPKLQRLGEIVDEMMGK 292 (304)
T ss_dssp HHHHHHHHTTCCEEEESHHHHGGGTTCSCHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCeEEEEehHHhCccccCCCHHHHHHhhchHHHHHHHHHHhcCCCh
Confidence 45888999999999999999999 9999999 9999888764443
No 114
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=98.71 E-value=3.2e-08 Score=93.06 Aligned_cols=76 Identities=16% Similarity=0.113 Sum_probs=56.1
Q ss_pred cHHHHHHHHhcC-CCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccC-CCHHHHHHHHHHHHHcCCChhhHHhhhh
Q 037779 209 PYDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKS-GDPVRRARAIVQAVTNYSDPDVLAEVSC 286 (310)
Q Consensus 209 ~~~l~~~i~~~~-~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~-~dp~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (310)
.++.+..+++.. ++|| |+.|||.|++|+.+++.+|||+|++|++++.. ++. ++++.+.++.+..-..+..+++
T Consensus 264 a~~~i~~v~~~~~~ipI--I~~GGI~s~~da~~~l~aGAd~V~vgra~l~~GP~~---~~~i~~~l~~~m~~~G~~si~e 338 (354)
T 4ef8_A 264 ALANINAFYRRCPGKLI--FGCGGVYTGEDAFLHVLAGASMVQVGTALQEEGPSI---FERLTSELLGVMAKKRYQTLDE 338 (354)
T ss_dssp HHHHHHHHHHHCTTSEE--EEESCCCSHHHHHHHHHHTEEEEEECHHHHHHCTTH---HHHHHHHHHHHHHHHTCCSGGG
T ss_pred HHHHHHHHHHhCCCCCE--EEECCcCCHHHHHHHHHcCCCEEEEhHHHHHhCHHH---HHHHHHHHHHHHHHcCCCCHHH
Confidence 477788887764 7899 67899999999999999999999999999985 553 4445555554444444555554
Q ss_pred ccC
Q 037779 287 GLG 289 (310)
Q Consensus 287 ~~~ 289 (310)
..|
T Consensus 339 l~G 341 (354)
T 4ef8_A 339 FRG 341 (354)
T ss_dssp TTT
T ss_pred HHH
Confidence 444
No 115
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=98.67 E-value=6.6e-07 Score=83.62 Aligned_cols=56 Identities=18% Similarity=0.252 Sum_probs=47.5
Q ss_pred cHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcC-CCEEEEccccccCCCHHHHHH
Q 037779 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVFKSGDPVRRAR 266 (310)
Q Consensus 209 ~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~G-adgV~VGsai~~~~dp~~~~~ 266 (310)
.+++++.+++..++|| |+.|||.|++++.++++.| ||.|++|++++..+|....++
T Consensus 265 ~~~~~~~ir~~~~iPV--i~~Ggi~s~~~a~~~l~~G~aD~V~iGR~~i~nPdl~~ki~ 321 (338)
T 1z41_A 265 QVSFAEKIREQADMAT--GAVGMITDGSMAEEILQNGRADLIFIGRELLRDPFFARTAA 321 (338)
T ss_dssp THHHHHHHHHHHCCEE--EECSSCCSHHHHHHHHHTTSCSEEEECHHHHHCTTHHHHHH
T ss_pred hHHHHHHHHHHCCCCE--EEECCCCCHHHHHHHHHcCCceEEeecHHHHhCchHHHHHH
Confidence 4567777877678899 6789999999999999998 999999999999888665443
No 116
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=98.62 E-value=1.1e-07 Score=90.92 Aligned_cols=76 Identities=14% Similarity=0.185 Sum_probs=54.0
Q ss_pred cHHHHHHHHhcC--CCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccC-CCHHHHHHHHHHHHHcCCChhhHHhhh
Q 037779 209 PYDLVMQTKQLG--RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKS-GDPVRRARAIVQAVTNYSDPDVLAEVS 285 (310)
Q Consensus 209 ~~~l~~~i~~~~--~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~-~dp~~~~~~~~~~~~~~~~~~~~~~~~ 285 (310)
..++++.+++.. ++|| |+.|||.|++|+.+++.+|||+|++||+++.. ++ .++++.+.+..+..-..+..++
T Consensus 331 al~~I~~v~~~v~~~iPI--Ig~GGI~s~eDa~e~l~aGAd~VqIgra~l~~GP~---~~~~i~~~L~~~l~~~G~~si~ 405 (415)
T 3i65_A 331 STKFICEMYNYTNKQIPI--IASGGIFSGLDALEKIEAGASVCQLYSCLVFNGMK---SAVQIKRELNHLLYQRGYYNLK 405 (415)
T ss_dssp HHHHHHHHHHHTTTCSCE--EECSSCCSHHHHHHHHHHTEEEEEESHHHHHHGGG---HHHHHHHHHHHHHHHTTCSSST
T ss_pred HHHHHHHHHHHhCCCCCE--EEECCCCCHHHHHHHHHcCCCEEEEcHHHHhcCHH---HHHHHHHHHHHHHHHcCCCCHH
Confidence 356777777765 7999 67899999999999999999999999999764 44 3444555555443334444444
Q ss_pred hccC
Q 037779 286 CGLG 289 (310)
Q Consensus 286 ~~~~ 289 (310)
+..|
T Consensus 406 e~~G 409 (415)
T 3i65_A 406 EAIG 409 (415)
T ss_dssp TTTT
T ss_pred HHhC
Confidence 4433
No 117
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.62 E-value=1.7e-07 Score=99.55 Aligned_cols=159 Identities=20% Similarity=0.256 Sum_probs=89.9
Q ss_pred HHHHHHHHcCCcEEEecc-cccchhhhc-CCCCCCCChH----HHHHHHhhcCcceEeeccccc---hHHHHHHHHcCCC
Q 037779 46 EQARIAEEAGACAVMALE-RVPADIRAQ-GGVARMSDPQ----LIKQIKSSVTIPVMAKARIGH---FVEAQILEAIGVD 116 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~-~~~~d~r~~-~G~~~~~~~~----~i~~i~~~~~lPv~~kd~i~~---~~~~~~~~~aGad 116 (310)
+.++.+.++|+++| .+| .+|...+.. .|+..+.+++ .++.+++.+++||++|...+. .+.++.+.++|+|
T Consensus 652 ~~a~~~~~~g~d~i-ein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~Pv~vK~~~~~~~~~~~a~~~~~~G~d 730 (1025)
T 1gte_A 652 ELSRKAEASGADAL-ELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGAD 730 (1025)
T ss_dssp HHHHHHHHTTCSEE-EEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCSSCEEEEECSCSSCHHHHHHHHHHHTCS
T ss_pred HHHHHHHhcCCCEE-EEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhCCceEEEeCCChHHHHHHHHHHHHcCCC
Confidence 56888888999998 777 444432211 2333444455 456667778999999865431 2345667778888
Q ss_pred eeeecCCCChhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEecC-CCCCchHHHHHHHHHhhcceecccccC
Q 037779 117 YVDESEVLTPADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTKGE-AGTGNIVEAVRHVRSVMGDIRVLRNMD 195 (310)
Q Consensus 117 ~v~~~~~~~~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~-~~~~~~~~~~~~~~~~~~~~~~l~~~~ 195 (310)
+|..+...... .+..+.. + +...+..++. ..++ +. .
T Consensus 731 ~i~v~Nt~~~~--------~~~~~~~-----~----------~~~~~~~~gr~~~gg------------------~s--g 767 (1025)
T 1gte_A 731 GVTATNTVSGL--------MGLKADG-----T----------PWPAVGAGKRTTYGG------------------VS--G 767 (1025)
T ss_dssp EEEECCCEEEC--------CCBCTTS-----C----------BSSCBTTTTBBCCEE------------------EE--S
T ss_pred EEEEecccccc--------ccccccc-----c----------ccccccccccccCCC------------------CC--c
Confidence 87643211000 0000000 0 0000000000 0000 00 0
Q ss_pred chhHHhhhccCCCcHHHHHHHHhcC-CCCEEEEccCCCCCHHHHHHHHHcCCCEEEEcccccc
Q 037779 196 DDEVFTFAKNIAAPYDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 196 ~d~~~~~~~~~~~~~~l~~~i~~~~-~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~ 257 (310)
+ .......+.++.+++.. ++|| |++|||.|++|+.+++++||++|++|++++.
T Consensus 768 ~-------~~~~~~~~~v~~v~~~~~~ipv--i~~GGI~s~~da~~~l~~Ga~~v~vg~~~l~ 821 (1025)
T 1gte_A 768 T-------AIRPIALRAVTTIARALPGFPI--LATGGIDSAESGLQFLHSGASVLQVCSAVQN 821 (1025)
T ss_dssp G-------GGHHHHHHHHHHHHHHSTTCCE--EEESSCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred c-------cchhHHHHHHHHHHHHcCCCCE--EEecCcCCHHHHHHHHHcCCCEEEEeecccc
Confidence 0 00011245677777665 7999 6789999999999999999999999999997
No 118
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=98.60 E-value=3.3e-07 Score=86.15 Aligned_cols=177 Identities=16% Similarity=0.127 Sum_probs=103.2
Q ss_pred ccCCCHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcC--cceEeecccc--chHHHHHHHHc--
Q 037779 40 MDVVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVT--IPVMAKARIG--HFVEAQILEAI-- 113 (310)
Q Consensus 40 ~~~~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~--lPv~~kd~i~--~~~~~~~~~~a-- 113 (310)
.....+++|.++.++|.-.+ +. . + +...+....+++.-. .++.+..... ..+.++.+.+.
T Consensus 66 ~~~~~~~lA~Ava~~Gglg~--i~------~--~----~s~e~~~~~i~~~p~~l~~v~~~~g~~~~~~~~~~~l~~~~~ 131 (351)
T 2c6q_A 66 DTVGTFEMAKVLCKFSLFTA--VH------K--H----YSLVQWQEFAGQNPDCLEHLAASSGTGSSDFEQLEQILEAIP 131 (351)
T ss_dssp TTTSCHHHHHHHHHTTCEEE--CC------T--T----CCHHHHHHHHHHCGGGCTTEEEEECSSHHHHHHHHHHHHHCT
T ss_pred CCCCcHHHHHHHHHCCCEEE--Ec------C--C----CCHHHHHHHHhhCchhhheeEeecCCChHHHHHHHHHHhccC
Confidence 34456899999999997665 20 0 0 111222334432111 1233222221 23455566665
Q ss_pred CCCeeeec-CCCChh---HHHHHHHhcCCCCcEEe-ecCCHHHHHHHHHhCCCEEEEe-cCCCCCchHHHHHHHHHhhcc
Q 037779 114 GVDYVDES-EVLTPA---DEENHINKHNFRVPFVC-GCRNLGESLRRIREGAAMIRTK-GEAGTGNIVEAVRHVRSVMGD 187 (310)
Q Consensus 114 Gad~v~~~-~~~~~~---~~~~~~~~~~~~l~v~~-~v~t~~ea~~a~~~Gad~I~v~-g~~~~~~~~~~~~~~~~~~~~ 187 (310)
|++.+..+ ..-.+. +.++.+++..+++++++ .+.|.++++++.+.|+|+|.+. +..+....
T Consensus 132 g~~~i~i~~~~g~~~~~~~~i~~lr~~~~~~~vi~g~v~t~e~A~~a~~aGaD~I~v~~g~G~~~~~------------- 198 (351)
T 2c6q_A 132 QVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTT------------- 198 (351)
T ss_dssp TCCEEEEECSCTTBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTBCH-------------
T ss_pred CCCEEEEEecCCCcHHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHhCCCEEEECCCCCcCcCc-------------
Confidence 99987532 111233 34555555444677765 5889999999999999999874 22110000
Q ss_pred eecccccCchhHHhhhccCC-CcHHHHHHHHh---cCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccC
Q 037779 188 IRVLRNMDDDEVFTFAKNIA-APYDLVMQTKQ---LGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKS 258 (310)
Q Consensus 188 ~~~l~~~~~d~~~~~~~~~~-~~~~l~~~i~~---~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~ 258 (310)
+.+. ++. +....+..+.+ ..++|| |++|||.++.|+.+++.+||++|++|+.|+.+
T Consensus 199 -r~~~------------g~~~p~~~~l~~v~~~~~~~~ipv--Ia~GGI~~g~di~kAlalGA~~V~vG~~fl~~ 258 (351)
T 2c6q_A 199 -RKKT------------GVGYPQLSAVMECADAAHGLKGHI--ISDGGCSCPGDVAKAFGAGADFVMLGGMLAGH 258 (351)
T ss_dssp -HHHH------------CBCCCHHHHHHHHHHHHHHTTCEE--EEESCCCSHHHHHHHHHTTCSEEEESTTTTTB
T ss_pred -cccC------------CCCccHHHHHHHHHHHHhhcCCcE--EEeCCCCCHHHHHHHHHcCCCceeccHHHhcC
Confidence 0000 111 12233333322 236899 77999999999999999999999999999864
No 119
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=98.60 E-value=4.9e-07 Score=100.84 Aligned_cols=199 Identities=11% Similarity=0.111 Sum_probs=124.7
Q ss_pred cCCccccCCCHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcC--cceEeeccccc-------hH
Q 037779 35 RGGVIMDVVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVT--IPVMAKARIGH-------FV 105 (310)
Q Consensus 35 ~~g~i~~~~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~--lPv~~kd~i~~-------~~ 105 (310)
.+|+.....++++|.+..++|.-++.--....+ ...+ -+.|+++++.++ .|+-++...-+ .+
T Consensus 594 ~~gM~~~~~~~~lvaAvsnAGglg~l~~~~~~~-~e~l--------~~~I~~~~~~t~~~~~~gvN~~~~~~~~~~~~~~ 664 (2051)
T 2uv8_G 594 VPGMTPCTVSPDFVAATTNAGYTIELAGGGYFS-AAGM--------TAAIDSVVSQIEKGSTFGINLIYVNPFMLQWGIP 664 (2051)
T ss_dssp ECCCHHHHTCHHHHHHHHHTTCEEEEEGGGCCS-HHHH--------HHHHHHHHHHSCTTCCEEEEEETTCTTHHHHHHH
T ss_pred cCCCccccccHHHHHHHHcCCcEEEEccCCCCC-HHHH--------HHHHHHHHHhcCCCCceEEEEeecChhhhhhhHH
Confidence 333333455789999999999988631100000 0011 235666777664 68888855431 14
Q ss_pred HHHHHHHcCCCe--eeecCCC-ChhHHHHHHHhcCCCCcEEeecC----CHHHHHHHHHhCCCEE---EEecCCCCCchH
Q 037779 106 EAQILEAIGVDY--VDESEVL-TPADEENHINKHNFRVPFVCGCR----NLGESLRRIREGAAMI---RTKGEAGTGNIV 175 (310)
Q Consensus 106 ~~~~~~~aGad~--v~~~~~~-~~~~~~~~~~~~~~~l~v~~~v~----t~~ea~~a~~~Gad~I---~v~g~~~~~~~~ 175 (310)
.++.+.+.|+.. |...... .++...+.+... |+.++.-+. ....+.++.++|+|++ .+.|...+||..
T Consensus 665 ~~~~~~~~gv~i~~v~~~ag~p~~~~~~~~i~~l--G~~vi~~~~~~~~a~~~~~~~~~~g~d~~ii~~~~G~eaGGH~g 742 (2051)
T 2uv8_G 665 LIKELRSKGYPIQFLTIGAGVPSLEVASEYIETL--GLKYLGLKPGSIDAISQVINIAKAHPNFPIALQWTGGRGGGHHS 742 (2051)
T ss_dssp HHHHHHHTTCSEEEEEEESSCCCHHHHHHHHHHS--CCSCEEECCCSHHHHHHHHHHHHHSTTSCEEEEECCSSCSEECC
T ss_pred HHHHHHHcCCCcceEEecCCCCchhhHHHHHHHc--CCEEEEecCchHHHHHHHHHHHHhCCCceeEEEEEccCcCCCCC
Confidence 457778899988 6644442 334555666554 666665333 2334567778899983 444555555421
Q ss_pred HHHHHHHHhhcceecccccCchhHHhhhccCC-CcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHH-----------H
Q 037779 176 EAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIA-APYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMM-----------Q 243 (310)
Q Consensus 176 ~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~-~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~-----------~ 243 (310)
. + ++. ....++..+.+..++|| ||+|||.+++++..++ .
T Consensus 743 -----------------~-~---------d~~~~~l~l~~~v~~~~~ipv--iaaGGi~dg~~~~aaL~g~w~~~~g~~~ 793 (2051)
T 2uv8_G 743 -----------------F-E---------DAHTPMLQMYSKIRRHPNIML--IFGSGFGSADDTYPYLTGEWSTKFDYPP 793 (2051)
T ss_dssp -----------------S-C---------CSSHHHHHHHHHHTTCTTBCC--EEESSCCSHHHHTHHHHTCGGGTTTCCC
T ss_pred -----------------c-c---------cccccHHHHHHHHHhcCCceE--EEeCCCCCHHHHHHHHccccccccCccC
Confidence 0 0 011 13456788888788999 7899999999999999 8
Q ss_pred cCCCEEEEccccccCCCHHHHHHHHHHHHHc
Q 037779 244 LGCDGVFVGSGVFKSGDPVRRARAIVQAVTN 274 (310)
Q Consensus 244 ~GadgV~VGsai~~~~dp~~~~~~~~~~~~~ 274 (310)
+|||||.|||.|+-+..- .....+++++-+
T Consensus 794 lgadGv~~GTrf~~t~Ea-~~~~~~K~~iv~ 823 (2051)
T 2uv8_G 794 MPFDGFLFGSRVMIAKEV-KTSPDAKKCIAA 823 (2051)
T ss_dssp CCCSCEECSGGGTTSTTS-CCCHHHHHHHHT
T ss_pred CCCceeeechHHHhCccc-ccCHHHHHHHHh
Confidence 999999999999997642 223445555444
No 120
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=98.56 E-value=2.2e-07 Score=86.68 Aligned_cols=51 Identities=20% Similarity=0.264 Sum_probs=42.1
Q ss_pred HHHHHHHHhcC--CCCEEEEccCCCCCHHHHHHHHHcCCCEEEEcccccc-CCCHH
Q 037779 210 YDLVMQTKQLG--RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFK-SGDPV 262 (310)
Q Consensus 210 ~~l~~~i~~~~--~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~-~~dp~ 262 (310)
.+.++.+++.. ++|| |+.|||.|++++.+++++|||+|++|++++. .++..
T Consensus 276 ~~~i~~i~~~~~~~ipV--i~~GGI~~~~da~~~l~~GAd~V~igr~~l~~~P~~~ 329 (336)
T 1f76_A 276 TEIIRRLSLELNGRLPI--IGVGGIDSVIAAREKIAAGASLVQIYSGFIFKGPPLI 329 (336)
T ss_dssp HHHHHHHHHHHTTSSCE--EEESSCCSHHHHHHHHHHTCSEEEESHHHHHHCHHHH
T ss_pred HHHHHHHHHHhCCCCCE--EEECCCCCHHHHHHHHHCCCCEEEeeHHHHhcCcHHH
Confidence 45666776654 7999 6789999999999999999999999999886 55444
No 121
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=98.56 E-value=1.4e-06 Score=81.68 Aligned_cols=56 Identities=23% Similarity=0.239 Sum_probs=47.6
Q ss_pred cHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcC-CCEEEEccccccCCCHHHHHH
Q 037779 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVFKSGDPVRRAR 266 (310)
Q Consensus 209 ~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~G-adgV~VGsai~~~~dp~~~~~ 266 (310)
..++++.+++..++|| |+.|||.+++++.++++.| ||.|++|++++..+|....++
T Consensus 276 ~~~~~~~ir~~~~iPV--i~~Ggi~t~e~a~~~l~~G~aD~V~iGR~~lanPdl~~k~~ 332 (349)
T 3hgj_A 276 QVPFADAVRKRVGLRT--GAVGLITTPEQAETLLQAGSADLVLLGRVLLRDPYFPLRAA 332 (349)
T ss_dssp THHHHHHHHHHHCCEE--EECSSCCCHHHHHHHHHTTSCSEEEESTHHHHCTTHHHHHH
T ss_pred cHHHHHHHHHHcCceE--EEECCCCCHHHHHHHHHCCCceEEEecHHHHhCchHHHHHH
Confidence 4667788887667899 6789999999999999998 999999999999888665544
No 122
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.49 E-value=3.7e-06 Score=82.18 Aligned_cols=182 Identities=15% Similarity=0.149 Sum_probs=107.2
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhh-----cCcceEeeccc----cchHHHHHHHHcCC
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSS-----VTIPVMAKARI----GHFVEAQILEAIGV 115 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~-----~~lPv~~kd~i----~~~~~~~~~~~aGa 115 (310)
.+.++.+.+.+...+.+++ +....-|. ....+.++.+... ...++.+...+ ...+.++.+.++|+
T Consensus 173 ~~a~~~m~~~~~~~lpVVd----~~g~lvGi--vt~~Dil~~~~~~~~~~d~~~~~~vg~~i~~~~~~~~~a~~l~~~G~ 246 (491)
T 1zfj_A 173 ETAERILHEHRIEKLPLVD----NSGRLSGL--ITIKDIEKVIEFPHAAKDEFGRLLVAAAVGVTSDTFERAEALFEAGA 246 (491)
T ss_dssp HHHHHHHHHTTCSEEEEEC----TTSBEEEE--EEHHHHHHHHHCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCCEEEEEc----CCCcEEEE--EEHHHHHHHHhccccccCcCCcEEEEEeccCchhHHHHHHHHHHcCC
Confidence 3789999999988775441 11111122 1224455555430 11122222122 23467788889999
Q ss_pred Ceeeec-CCCChh---HHHHHHHhcCCCCcEEe-ecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceec
Q 037779 116 DYVDES-EVLTPA---DEENHINKHNFRVPFVC-GCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRV 190 (310)
Q Consensus 116 d~v~~~-~~~~~~---~~~~~~~~~~~~l~v~~-~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~ 190 (310)
|.+..+ ..-... +.++.+.+..++++++. .+.+.+.+..+.++|+|.|.+. ..++ .+..+ +.
T Consensus 247 d~ivi~~a~g~~~~~~~~i~~l~~~~p~~pvi~G~v~t~~~a~~~~~~Gad~I~vg-~g~g-~~~~t-----------r~ 313 (491)
T 1zfj_A 247 DAIVIDTAHGHSAGVLRKIAEIRAHFPNRTLIAGNIATAEGARALYDAGVDVVKVG-IGPG-SICTT-----------RV 313 (491)
T ss_dssp SEEEECCSCTTCHHHHHHHHHHHHHCSSSCEEEEEECSHHHHHHHHHTTCSEEEEC-SSCC-TTBCH-----------HH
T ss_pred CeEEEeeecCcchhHHHHHHHHHHHCCCCcEeCCCccCHHHHHHHHHcCCCEEEEC-ccCC-cceEE-----------ee
Confidence 998733 211222 34444444333566665 4788999999999999999884 2111 11000 00
Q ss_pred ccccCchhHHhhhccCCCcHHHHHHHHh---cCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccC
Q 037779 191 LRNMDDDEVFTFAKNIAAPYDLVMQTKQ---LGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKS 258 (310)
Q Consensus 191 l~~~~~d~~~~~~~~~~~~~~l~~~i~~---~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~ 258 (310)
+... ..+..+.++.+.+ ..++|| |++|||.++.|+.+++++||++|++|++|+.+
T Consensus 314 ~~~~-----------~~p~~~~l~~~~~~~~~~~ipv--ia~GGi~~~~di~kal~~GA~~v~vG~~~~~~ 371 (491)
T 1zfj_A 314 VAGV-----------GVPQVTAIYDAAAVAREYGKTI--IADGGIKYSGDIVKALAAGGNAVMLGSMFAGT 371 (491)
T ss_dssp HTCC-----------CCCHHHHHHHHHHHHHHTTCEE--EEESCCCSHHHHHHHHHTTCSEEEESTTTTTB
T ss_pred ecCC-----------CCCcHHHHHHHHHHHhhcCCCE--EeeCCCCCHHHHHHHHHcCCcceeeCHHhhCC
Confidence 0010 0123344444433 246898 78999999999999999999999999999864
No 123
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=98.47 E-value=4.8e-07 Score=84.32 Aligned_cols=114 Identities=18% Similarity=0.205 Sum_probs=74.6
Q ss_pred HHHHHHHhcCCCCcEEee-c---CCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhh
Q 037779 128 DEENHINKHNFRVPFVCG-C---RNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFA 203 (310)
Q Consensus 128 ~~~~~~~~~~~~l~v~~~-v---~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~ 203 (310)
+.++.+++ .++++++. + .++++++.+.+.|+|+|.+.+..++. +. .++..+.. +.....++. +
T Consensus 172 ~~i~~vr~--~~~Pv~vK~v~~g~~~e~a~~~~~~G~d~I~vs~~ggt~-~~-~~~~~r~~--~~~~~~~~~-~------ 238 (332)
T 1vcf_A 172 ERLAELLP--LPFPVMVKEVGHGLSREAALALRDLPLAAVDVAGAGGTS-WA-RVEEWVRF--GEVRHPELC-E------ 238 (332)
T ss_dssp HHHHHHCS--CSSCEEEECSSSCCCHHHHHHHTTSCCSEEECCCBTSCC-HH-HHHHTC----------CCT-T------
T ss_pred HHHHHHHc--CCCCEEEEecCCCCCHHHHHHHHHcCCCEEEeCCCCCCc-ch-hHHHhhcc--ccchhhhHh-h------
Confidence 34444443 57888887 7 79999999999999999987553321 11 00000000 000000000 0
Q ss_pred ccCCCcHHHHHHHHhcC-CCCEEEEccCCCCCHHHHHHHHHcCCCEEEEcccccc
Q 037779 204 KNIAAPYDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 204 ~~~~~~~~l~~~i~~~~-~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~ 257 (310)
.-.+.++.+..+++.. ++|| |++|||.+++|+.+++.+|||+|++|++++.
T Consensus 239 -~g~~~~~~l~~v~~~~~~ipv--ia~GGI~~~~d~~kal~~GAd~V~igr~~l~ 290 (332)
T 1vcf_A 239 -IGIPTARAILEVREVLPHLPL--VASGGVYTGTDGAKALALGADLLAVARPLLR 290 (332)
T ss_dssp -CSCBHHHHHHHHHHHCSSSCE--EEESSCCSHHHHHHHHHHTCSEEEECGGGHH
T ss_pred -ccccHHHHHHHHHHhcCCCeE--EEECCCCCHHHHHHHHHhCCChHhhhHHHHH
Confidence 0123466777777765 7999 6789999999999999999999999999995
No 124
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=98.46 E-value=1.5e-06 Score=84.03 Aligned_cols=76 Identities=14% Similarity=0.186 Sum_probs=52.7
Q ss_pred cHHHHHHHHhcC--CCCEEEEccCCCCCHHHHHHHHHcCCCEEEEcccccc-CCCHHHHHHHHHHHHHcCCChhhHHhhh
Q 037779 209 PYDLVMQTKQLG--RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFK-SGDPVRRARAIVQAVTNYSDPDVLAEVS 285 (310)
Q Consensus 209 ~~~l~~~i~~~~--~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~-~~dp~~~~~~~~~~~~~~~~~~~~~~~~ 285 (310)
.+++++.+++.. ++|| |+.|||.|++|+.+++++|||+|++||+++. .++. .+.+.+.+..+....++..++
T Consensus 359 sl~~i~~v~~~v~~~iPV--Ig~GGI~s~~DA~e~l~aGAd~Vqigrall~~gP~l---~~~i~~~l~~~l~~~G~~si~ 433 (443)
T 1tv5_A 359 STKFICEMYNYTNKQIPI--IASGGIFSGLDALEKIEAGASVCQLYSCLVFNGMKS---AVQIKRELNHLLYQRGYYNLK 433 (443)
T ss_dssp HHHHHHHHHHHTTTCSCE--EEESSCCSHHHHHHHHHTTEEEEEESHHHHHHGGGH---HHHHHHHHHHHHHHHTCSSSG
T ss_pred HHHHHHHHHHHcCCCCcE--EEECCCCCHHHHHHHHHcCCCEEEEcHHHHhcChHH---HHHHHHHHHHHHHHhCCCCHH
Confidence 356778887765 8999 6789999999999999999999999999764 4443 344444444333333333444
Q ss_pred hccC
Q 037779 286 CGLG 289 (310)
Q Consensus 286 ~~~~ 289 (310)
+..|
T Consensus 434 e~~G 437 (443)
T 1tv5_A 434 EAIG 437 (443)
T ss_dssp GGTT
T ss_pred HHhh
Confidence 4333
No 125
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=98.44 E-value=1.2e-06 Score=86.11 Aligned_cols=128 Identities=16% Similarity=0.142 Sum_probs=83.0
Q ss_pred HHHHHHHHcCCCeeeec--CCCC--hhHHHHHHHhcCCC-CcEEe-ecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHH
Q 037779 105 VEAQILEAIGVDYVDES--EVLT--PADEENHINKHNFR-VPFVC-GCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAV 178 (310)
Q Consensus 105 ~~~~~~~~aGad~v~~~--~~~~--~~~~~~~~~~~~~~-l~v~~-~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~ 178 (310)
+.++.+.+.|++.+..+ .... ..+.++.++++.++ +++++ .+.+.++++.+.++|+|++.+ |...++. ..
T Consensus 245 e~~~~l~e~gv~~l~Vd~~~g~~~~~~~~i~~lk~~~~~~~~Vi~G~V~t~~~a~~l~~aGad~I~V-g~~~g~~-~~-- 320 (503)
T 1me8_A 245 ERVPALVEAGADVLCIDSSDGFSEWQKITIGWIREKYGDKVKVGAGNIVDGEGFRYLADAGADFIKI-GIGGGSI-CI-- 320 (503)
T ss_dssp HHHHHHHHHTCSEEEECCSCCCSHHHHHHHHHHHHHHGGGSCEEEEEECSHHHHHHHHHHTCSEEEE-CSSCSTT-CC--
T ss_pred HHHHHHHhhhccceEEecccCcccchhhHHHHHHHhCCCCceEeeccccCHHHHHHHHHhCCCeEEe-cccCCcC-cc--
Confidence 45677778899987642 2212 12344555554345 66665 588999999999999999988 4433211 00
Q ss_pred HHHHHhhcceecccccCchhHHhhhccCCC-cHHHHHHHHhcC---------CCCEEEEccCCCCCHHHHHHHHHcCCCE
Q 037779 179 RHVRSVMGDIRVLRNMDDDEVFTFAKNIAA-PYDLVMQTKQLG---------RLPVVHFAAGGVATPADAAMMMQLGCDG 248 (310)
Q Consensus 179 ~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~-~~~l~~~i~~~~---------~iPVv~ia~GGI~t~~di~~~~~~Gadg 248 (310)
.+.+. +++. ....+..+.+.. ++|| |++|||.++.|+.+++++||++
T Consensus 321 ---------~r~~~------------~~g~p~~~~l~~v~~~~~~~~~~~~~~ipv--ia~GGi~~~~di~kAlalGA~~ 377 (503)
T 1me8_A 321 ---------TREQK------------GIGRGQATAVIDVVAERNKYFEETGIYIPV--CSDGGIVYDYHMTLALAMGADF 377 (503)
T ss_dssp ---------STTTT------------CCCCCHHHHHHHHHHHHHHHHHHHSEECCE--EEESCCCSHHHHHHHHHTTCSE
T ss_pred ---------ccccc------------CCCCchHHHHHHHHHHHHHHhhhcCCCceE--EEeCCCCCHHHHHHHHHcCCCE
Confidence 00000 1111 233333433221 5899 7899999999999999999999
Q ss_pred EEEccccccCC
Q 037779 249 VFVGSGVFKSG 259 (310)
Q Consensus 249 V~VGsai~~~~ 259 (310)
|++|+.|..+.
T Consensus 378 V~iG~~~~~~~ 388 (503)
T 1me8_A 378 IMLGRYFARFE 388 (503)
T ss_dssp EEESHHHHTBT
T ss_pred EEECchhhccc
Confidence 99999997643
No 126
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=98.40 E-value=4e-06 Score=79.06 Aligned_cols=57 Identities=25% Similarity=0.184 Sum_probs=48.0
Q ss_pred cHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcC-CCEEEEccccccCCCHHHHHHH
Q 037779 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVFKSGDPVRRARA 267 (310)
Q Consensus 209 ~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~G-adgV~VGsai~~~~dp~~~~~~ 267 (310)
..++++.+++..++|| |+.|||.+++++.++++.| ||.|++|++++..+|....++.
T Consensus 283 ~~~~~~~ir~~~~iPV--i~~GgI~s~e~a~~~l~~G~aD~V~iGR~~lanPdl~~k~~~ 340 (363)
T 3l5l_A 283 MGPIAERVRREAKLPV--TSAWGFGTPQLAEAALQANQLDLVSVGRAHLADPHWAYFAAK 340 (363)
T ss_dssp THHHHHHHHHHHTCCE--EECSSTTSHHHHHHHHHTTSCSEEECCHHHHHCTTHHHHHHH
T ss_pred hHHHHHHHHHHcCCcE--EEeCCCCCHHHHHHHHHCCCccEEEecHHHHhCchHHHHHHH
Confidence 4567777877678999 6789999999999999998 9999999999998886655443
No 127
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=98.37 E-value=6.1e-07 Score=85.25 Aligned_cols=98 Identities=19% Similarity=0.316 Sum_probs=71.7
Q ss_pred HHHHHHHhcCCCCcEEe-ecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccC
Q 037779 128 DEENHINKHNFRVPFVC-GCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNI 206 (310)
Q Consensus 128 ~~~~~~~~~~~~l~v~~-~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~ 206 (310)
+.++.+++. .++++++ .+.+.++++.+.+.|+|.|.+.+..++. + |. .
T Consensus 215 ~~i~~i~~~-~~~Pv~vkgv~t~e~a~~a~~aGad~I~vs~~gg~~------------------~-----d~-------~ 263 (380)
T 1p4c_A 215 EALRWLRDL-WPHKLLVKGLLSAEDADRCIAEGADGVILSNHGGRQ------------------L-----DC-------A 263 (380)
T ss_dssp HHHHHHHHH-CCSEEEEEEECCHHHHHHHHHTTCSEEEECCGGGTS------------------C-----TT-------C
T ss_pred HHHHHHHHh-cCCCEEEEecCcHHHHHHHHHcCCCEEEEcCCCCCc------------------C-----CC-------C
Confidence 455555543 3567665 5789999999999999999985332110 0 00 0
Q ss_pred CCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccC
Q 037779 207 AAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKS 258 (310)
Q Consensus 207 ~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~ 258 (310)
..+++.++.+++..++|| |++|||.+++|+.+++.+||++|++|++++..
T Consensus 264 ~~~~~~l~~v~~~~~~pV--ia~GGI~~~~dv~kal~~GAdaV~iGr~~l~~ 313 (380)
T 1p4c_A 264 ISPMEVLAQSVAKTGKPV--LIDSGFRRGSDIVKALALGAEAVLLGRATLYG 313 (380)
T ss_dssp CCGGGTHHHHHHHHCSCE--EECSSCCSHHHHHHHHHTTCSCEEESHHHHHH
T ss_pred cCHHHHHHHHHHHcCCeE--EEECCCCCHHHHHHHHHhCCcHhhehHHHHHH
Confidence 124556666666556699 78999999999999999999999999999874
No 128
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=98.36 E-value=6.3e-06 Score=71.29 Aligned_cols=54 Identities=20% Similarity=0.274 Sum_probs=45.0
Q ss_pred cHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHH
Q 037779 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRR 264 (310)
Q Consensus 209 ~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~ 264 (310)
..+.+..+++..++|+ |+.||+++++++.++++.|++++++||+|+..+.....
T Consensus 162 ~~~~i~~~~~~~~~Pv--ia~~g~~~~~~~~~~~~~G~~~~~vg~a~~~~~~~~~~ 215 (237)
T 3cwo_X 162 DTEMIRFVRPLTTLPI--IASGGAGKMEHFLEAFLAGADAALAASVFHFREIDVRE 215 (237)
T ss_dssp CHHHHHHHGGGCCSCE--EEESCCCSHHHHHHHHHHTCSEEEESHHHHTTSSCHHH
T ss_pred cHHHHHHHHHhcCCCE--EecCCCCCHHHHHHHHHcCcHHHhhhHHHHcCCCCHHH
Confidence 3677888887778999 55799999999999999999999999999877644333
No 129
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=98.35 E-value=2.9e-06 Score=79.48 Aligned_cols=56 Identities=16% Similarity=0.083 Sum_probs=48.2
Q ss_pred cHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcC-CCEEEEccccccCCCHHHHHH
Q 037779 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVFKSGDPVRRAR 266 (310)
Q Consensus 209 ~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~G-adgV~VGsai~~~~dp~~~~~ 266 (310)
.+++.+.+++..++|| |+.|||.+++++.++++.| ||.|++|++++..+|....++
T Consensus 265 ~~~~~~~ir~~~~iPV--i~~Ggi~t~e~Ae~~l~~G~aD~V~iGR~~lanPdl~~k~~ 321 (343)
T 3kru_A 265 QVKYAETIKKRCNIKT--SAVGLITTQELAEEILSNERADLVALGRELLRNPYWVLHTY 321 (343)
T ss_dssp THHHHHHHHHHHTCEE--EEESSCCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHTC
T ss_pred eehHHHHHHHhcCccc--ceeeeeeHHHHHHHHHhchhhHHHHHHHHHhcCCeEEEEEe
Confidence 4667778887777899 6789999999999999997 999999999999888776554
No 130
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=98.33 E-value=2.6e-06 Score=77.73 Aligned_cols=92 Identities=21% Similarity=0.214 Sum_probs=66.6
Q ss_pred hHHHHHHHh-cCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhcc
Q 037779 127 ADEENHINK-HNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKN 205 (310)
Q Consensus 127 ~~~~~~~~~-~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~ 205 (310)
...++.+++ .+....+.++++|.+|++.+.+.|+|||.+... + ++.
T Consensus 183 ~~av~~ar~~~~~~~~IgVev~t~eea~eA~~aGaD~I~ld~~-~-------------------------~~~------- 229 (286)
T 1x1o_A 183 GEAVRRAKARAPHYLKVEVEVRSLEELEEALEAGADLILLDNF-P-------------------------LEA------- 229 (286)
T ss_dssp HHHHHHHHHHSCTTSCEEEEESSHHHHHHHHHHTCSEEEEESC-C-------------------------HHH-------
T ss_pred HHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHcCCCEEEECCC-C-------------------------HHH-------
Confidence 445555655 344578999999999999999999999998621 1 000
Q ss_pred CCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCC
Q 037779 206 IAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSG 259 (310)
Q Consensus 206 ~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~ 259 (310)
..+..+.++ .++|+ .++||| +++++.++.++|+|+|.||+.++.++
T Consensus 230 ---~k~av~~v~--~~ipi--~AsGGI-t~eni~~~a~tGvD~IsVgs~~~~a~ 275 (286)
T 1x1o_A 230 ---LREAVRRVG--GRVPL--EASGNM-TLERAKAAAEAGVDYVSVGALTHSAK 275 (286)
T ss_dssp ---HHHHHHHHT--TSSCE--EEESSC-CHHHHHHHHHHTCSEEECTHHHHSCC
T ss_pred ---HHHHHHHhC--CCCeE--EEEcCC-CHHHHHHHHHcCCCEEEEcHHHcCCC
Confidence 012222232 25798 567999 69999999999999999999887654
No 131
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=98.33 E-value=3.7e-05 Score=66.65 Aligned_cols=185 Identities=18% Similarity=0.201 Sum_probs=112.0
Q ss_pred CCCHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcC-cceEeecccc-chHH-HHHHHHcCCCee
Q 037779 42 VVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVT-IPVMAKARIG-HFVE-AQILEAIGVDYV 118 (310)
Q Consensus 42 ~~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~-lPv~~kd~i~-~~~~-~~~~~~aGad~v 118 (310)
..+++.++.+.++|++++-.. ..| .|-+.-+++..+++.+... -+..+..|++ ..+. .+.+..++.|.|
T Consensus 8 it~~eda~~a~~~GaD~iGfi-f~~-------~SpR~V~~~~a~~i~~~~~~~~~~VgVfvn~~~~~i~~~~~~~~ld~v 79 (203)
T 1v5x_A 8 ITRLEDALLAEALGAFALGFV-LAP-------GSRRRIAPEAARAIGEALGPFVVRVGVFRDQPPEEVLRLMEEARLQVA 79 (203)
T ss_dssp CCCHHHHHHHHHHTCSEEEEE-CCT-------TCTTBCCHHHHHHHHHHSCSSSEEEEEESSCCHHHHHHHHHHTTCSEE
T ss_pred CCcHHHHHHHHHcCCCEEEEE-ecC-------CCCCcCCHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHhhCCCEE
Confidence 466899999999999998322 122 2333445788888876643 1222333444 2334 356677999999
Q ss_pred eecCCCChhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEecC-CCCCchHHHHHHHHHhhcceecccccCch
Q 037779 119 DESEVLTPADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTKGE-AGTGNIVEAVRHVRSVMGDIRVLRNMDDD 197 (310)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 197 (310)
..+-..++. ..+.+.. +..+.-.+.+++..++ .+....+|++-+... .++|
T Consensus 80 QLHG~e~~~-~~~~l~~-~~~vika~~v~~~~~l-~~~~~~~d~~LlD~~~gGtG------------------------- 131 (203)
T 1v5x_A 80 QLHGEEPPE-WAEAVGR-FYPVIKAFPLEGPARP-EWADYPAQALLLDGKRPGSG------------------------- 131 (203)
T ss_dssp EECSCCCHH-HHHHHTT-TSCEEEEEECSSSCCG-GGGGSSCSEEEEECSSTTSC-------------------------
T ss_pred EECCCCCHH-HHHHhcc-CCCEEEEEEcCChHhh-hhhhcCCCEEEEcCCCCCCC-------------------------
Confidence 755444454 4444432 2222222344444333 332333787766532 2222
Q ss_pred hHHhhhccCCCcHHHHHH-HHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCC---CHHHHHHHHHHHHH
Q 037779 198 EVFTFAKNIAAPYDLVMQ-TKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSG---DPVRRARAIVQAVT 273 (310)
Q Consensus 198 ~~~~~~~~~~~~~~l~~~-i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~---dp~~~~~~~~~~~~ 273 (310)
..-+|++++. .. .+.|+ +.+||| +|+|+.+++..++.||=|.|.+-.++ | .+.+++|.+.++
T Consensus 132 --------~~fdW~~l~~~~~--~~~p~--~LAGGL-~peNV~~ai~~~p~gVDvsSGvE~~pG~KD-~~ki~~fi~~~r 197 (203)
T 1v5x_A 132 --------EAYPRAWAKPLLA--TGRRV--ILAGGI-APENLEEVLALRPYALDLASGVEEAPGVKS-AEKLRALFARLA 197 (203)
T ss_dssp --------CCCCGGGGHHHHH--TTSCE--EECSSC-CSTTHHHHHHHCCSEEEESGGGEEETTEEC-HHHHHHHHHHHH
T ss_pred --------CccCHHHHHhhhc--cCCcE--EEECCC-CHHHHHHHHhcCCCEEEeCCceecCCCCcC-HHHHHHHHHHHH
Confidence 1225555554 32 24698 569999 69999887777999999999998632 4 457788888887
Q ss_pred cCC
Q 037779 274 NYS 276 (310)
Q Consensus 274 ~~~ 276 (310)
.++
T Consensus 198 ~~~ 200 (203)
T 1v5x_A 198 SLR 200 (203)
T ss_dssp HTC
T ss_pred Hhh
Confidence 654
No 132
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=98.29 E-value=4.9e-06 Score=78.91 Aligned_cols=55 Identities=20% Similarity=0.166 Sum_probs=46.1
Q ss_pred cHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcC-CCEEEEccccccCCCHHHHHH
Q 037779 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVFKSGDPVRRAR 266 (310)
Q Consensus 209 ~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~G-adgV~VGsai~~~~dp~~~~~ 266 (310)
++++++.+++..++|| |+.||| +++++.++++.| ||+|++|++++..++....++
T Consensus 287 ~~~~~~~ik~~~~iPv--i~~Ggi-~~~~a~~~l~~g~aD~V~igR~~l~~P~l~~k~~ 342 (377)
T 2r14_A 287 PEGFREQMRQRFKGGL--IYCGNY-DAGRAQARLDDNTADAVAFGRPFIANPDLPERFR 342 (377)
T ss_dssp CTTHHHHHHHHCCSEE--EEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHH
T ss_pred hHHHHHHHHHHCCCCE--EEECCC-CHHHHHHHHHCCCceEEeecHHHHhCchHHHHHH
Confidence 3456777887778899 678999 699999999987 999999999999888765554
No 133
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=98.29 E-value=6.8e-05 Score=65.10 Aligned_cols=186 Identities=16% Similarity=0.123 Sum_probs=113.1
Q ss_pred CCCHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcC-cceEeecccc-chHH-HHHHHHcCCCee
Q 037779 42 VVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVT-IPVMAKARIG-HFVE-AQILEAIGVDYV 118 (310)
Q Consensus 42 ~~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~-lPv~~kd~i~-~~~~-~~~~~~aGad~v 118 (310)
..+++.++.+.++|++++-.. ..| .|-+.-+++..+++.+... -+..+..|++ ..+. .+.+...+.|.|
T Consensus 9 it~~eda~~a~~~GaD~iGfi-f~~-------~SpR~V~~~~a~~i~~~~~~~~~~VgVfvn~~~~~i~~~~~~~~ld~v 80 (205)
T 1nsj_A 9 ITNLEDALFSVESGADAVGFV-FYP-------KSKRYISPEDARRISVELPPFVFRVGVFVNEEPEKILDVASYVQLNAV 80 (205)
T ss_dssp CCSHHHHHHHHHHTCSEEEEE-CCT-------TCTTBCCHHHHHHHHHHSCSSSEEEEEESSCCHHHHHHHHHHHTCSEE
T ss_pred CCcHHHHHHHHHcCCCEEEEE-ecC-------CCCCcCCHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHhhCCCEE
Confidence 466899999999999998322 122 2333445788888876643 2222333444 2334 356677999999
Q ss_pred eecCCCChhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCC--CCCchHHHHHHHHHhhcceecccccCc
Q 037779 119 DESEVLTPADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEA--GTGNIVEAVRHVRSVMGDIRVLRNMDD 196 (310)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~ 196 (310)
..+-..++ +..+.++. ...+.-.+.+++..++..+.+..+|++-+.... ++|+
T Consensus 81 QLHG~e~~-~~~~~l~~-~~~vika~~v~~~~~l~~~~~~~~d~~LlD~~~~~~GGt----------------------- 135 (205)
T 1nsj_A 81 QLHGEEPI-ELCRKIAE-RILVIKAVGVSNERDMERALNYREFPILLDTKTPEYGGS----------------------- 135 (205)
T ss_dssp EECSCCCH-HHHHHHHT-TSEEEEEEEESSHHHHHHHGGGTTSCEEEEESCSSSSSC-----------------------
T ss_pred EECCCCCH-HHHHHHhc-CCCEEEEEEcCCHHHHHHHHHcCCCEEEECCCCCCCCCC-----------------------
Confidence 75544444 44444532 122333345667666655544458887665321 1121
Q ss_pred hhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHH-cCCCEEEEccccccCC---CHHHHHHHHHHHH
Q 037779 197 DEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQ-LGCDGVFVGSGVFKSG---DPVRRARAIVQAV 272 (310)
Q Consensus 197 d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~-~GadgV~VGsai~~~~---dp~~~~~~~~~~~ 272 (310)
+..-+|++++.+. ..+.|+ +.+||| +|+|+.++++ .++.||=|.|.+-.++ | .+.+++|.+.+
T Consensus 136 --------G~~fdw~~l~~~~-~~~~p~--~LAGGL-~peNV~~ai~~~~p~gVDvsSGvE~~pG~KD-~~ki~~fi~~~ 202 (205)
T 1nsj_A 136 --------GKTFDWSLILPYR-DRFRYL--VLSGGL-NPENVRSAIDVVRPFAVDVSSGVEAFPGKKD-HDSIKMFIKNA 202 (205)
T ss_dssp --------CSCCCGGGTGGGG-GGSSCE--EEESSC-CTTTHHHHHHHHCCSEEEESGGGEEETTEEC-HHHHHHHHHHH
T ss_pred --------CCccCHHHHHhhh-cCCCcE--EEECCC-CHHHHHHHHHhcCCCEEEECCceecCCCCcC-HHHHHHHHHHH
Confidence 1122455544431 124698 558999 6999988776 6999999999998642 4 45678888776
Q ss_pred H
Q 037779 273 T 273 (310)
Q Consensus 273 ~ 273 (310)
+
T Consensus 203 r 203 (205)
T 1nsj_A 203 K 203 (205)
T ss_dssp H
T ss_pred h
Confidence 5
No 134
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=98.25 E-value=1e-05 Score=71.31 Aligned_cols=128 Identities=20% Similarity=0.168 Sum_probs=77.5
Q ss_pred HHHHHHHHcCCcEEEe-cc-cccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeeeecCC
Q 037779 46 EQARIAEEAGACAVMA-LE-RVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVDESEV 123 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~-l~-~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~~~~~ 123 (310)
..++.+.+.|+++|.. +| .+ . ..|.. ..-.+.++++++.++ |+++|..+.. ..
T Consensus 74 ~~~~~A~~~Gad~Id~viN~g~---~--~~~~~-~~~~~~i~~v~~a~~-pv~vKvi~e~------------------~~ 128 (225)
T 1mzh_A 74 KEAVEAVRDGAQELDIVWNLSA---F--KSEKY-DFVVEELKEIFRETP-SAVHKVIVET------------------PY 128 (225)
T ss_dssp HHHHHHHHTTCSEEEEECCHHH---H--HTTCH-HHHHHHHHHHHHTCT-TSEEEEECCG------------------GG
T ss_pred HHHHHHHHcCCCEEEEEecHHH---H--hcCCh-HHHHHHHHHHHHHhc-CceEEEEEeC------------------CC
Confidence 5577888899999832 44 11 0 11110 001346778888877 8887764321 01
Q ss_pred CChhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhh
Q 037779 124 LTPADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFA 203 (310)
Q Consensus 124 ~~~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~ 203 (310)
++.+++. +-++.+.++|+|+|.++.-.+++
T Consensus 129 l~~~~~~-------------------~~a~~a~eaGad~I~tstg~~~g------------------------------- 158 (225)
T 1mzh_A 129 LNEEEIK-------------------KAVEICIEAGADFIKTSTGFAPR------------------------------- 158 (225)
T ss_dssp CCHHHHH-------------------HHHHHHHHHTCSEEECCCSCSSS-------------------------------
T ss_pred CCHHHHH-------------------HHHHHHHHhCCCEEEECCCCCCC-------------------------------
Confidence 1222221 12445667899999765211111
Q ss_pred ccCCCcHHHHHHHHhcC--CCCEEEEccCCCCCHHHHHHHHHcCCCEEEEcc
Q 037779 204 KNIAAPYDLVMQTKQLG--RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGS 253 (310)
Q Consensus 204 ~~~~~~~~l~~~i~~~~--~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGs 253 (310)
+.+++.++.+++.. ++|| +++|||.|++++.+++++||+.|.+++
T Consensus 159 ---ga~~~~i~~v~~~v~~~ipV--ia~GGI~t~~da~~~l~aGA~~iG~s~ 205 (225)
T 1mzh_A 159 ---GTTLEEVRLIKSSAKGRIKV--KASGGIRDLETAISMIEAGADRIGTSS 205 (225)
T ss_dssp ---CCCHHHHHHHHHHHTTSSEE--EEESSCCSHHHHHHHHHTTCSEEEESC
T ss_pred ---CCCHHHHHHHHHHhCCCCcE--EEECCCCCHHHHHHHHHhCchHHHHcc
Confidence 22456666666643 6899 679999999999999999999655554
No 135
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=98.25 E-value=9.1e-06 Score=76.71 Aligned_cols=55 Identities=18% Similarity=0.169 Sum_probs=46.9
Q ss_pred cHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcC-CCEEEEccccccCCCHHHHHH
Q 037779 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVFKSGDPVRRAR 266 (310)
Q Consensus 209 ~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~G-adgV~VGsai~~~~dp~~~~~ 266 (310)
++++++.+++..++|| |+.||| +++++.++++.| ||+|++|++++..++....++
T Consensus 281 ~~~~~~~i~~~~~iPv--i~~Ggi-~~~~a~~~l~~g~aD~V~igR~~i~~P~l~~~~~ 336 (365)
T 2gou_A 281 PVSFKRALREAYQGVL--IYAGRY-NAEKAEQAINDGLADMIGFGRPFIANPDLPERLR 336 (365)
T ss_dssp CHHHHHHHHHHCCSEE--EEESSC-CHHHHHHHHHTTSCSEEECCHHHHHCTTHHHHHH
T ss_pred cHHHHHHHHHHCCCcE--EEeCCC-CHHHHHHHHHCCCcceehhcHHHHhCchHHHHHH
Confidence 4567788888778999 668999 899999999998 999999999999888765543
No 136
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=98.23 E-value=0.00013 Score=64.37 Aligned_cols=190 Identities=22% Similarity=0.264 Sum_probs=112.0
Q ss_pred ceeeecCCccccCCCHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEee-ccccchHHHH
Q 037779 30 LAQMLRGGVIMDVVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAK-ARIGHFVEAQ 108 (310)
Q Consensus 30 ~~~~l~~g~i~~~~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~k-d~i~~~~~~~ 108 (310)
|.++.+| ..+++.++ +.++|++++-.+ ..| +|-|.-+++..+++.+....|+... .+.+..+..+
T Consensus 21 M~VKICG-----it~~ed~~-a~~~gaD~iGfI-f~~-------~SpR~V~~~~A~~i~~~~~~~~~~v~v~v~~~ei~~ 86 (228)
T 4aaj_A 21 MFVKICG-----IKSLEELE-IVEKHADATGVV-VNS-------NSKRRIPLEKAREIIENSAIPVFLVSTMVGFSEWAM 86 (228)
T ss_dssp CEEEECC-----CCSHHHHH-HHHTTCSEEEEE-CSS-------SSTTBCCHHHHHHHHHHCSSCEEEEECCCCHHHHHH
T ss_pred eEEEECC-----CCcHHHHH-HHHcCCCEEEEE-ecC-------CCCCCCCHHHHHHHHHhhCCCCEEEeccCchHHHHH
Confidence 4555666 34577776 467899998322 222 3334445888888887776666543 3333223345
Q ss_pred HHHHcCCCeeeecCCCChhHHHHHHHhcCCCCcEE--eecCC----H-HHHH----HHHHhCCCEEEEecCCCCCchHHH
Q 037779 109 ILEAIGVDYVDESEVLTPADEENHINKHNFRVPFV--CGCRN----L-GESL----RRIREGAAMIRTKGEAGTGNIVEA 177 (310)
Q Consensus 109 ~~~~aGad~v~~~~~~~~~~~~~~~~~~~~~l~v~--~~v~t----~-~ea~----~a~~~Gad~I~v~g~~~~~~~~~~ 177 (310)
.+...+.|.|-.+-..++ +..+.+++. ++++++ ..+.+ . +++. ......+|++-+....++|.
T Consensus 87 ~i~~~~ld~vQLHG~E~~-~~~~~l~~~-~~~~viKa~~v~~~~~~~~~~~~~~~~~~~~~~~d~~LlDs~GGtG~---- 160 (228)
T 4aaj_A 87 AIERTGAQYIQVHSNALP-QTIDTLKKE-FGVFVMKAFRVPTISKNPEEDANRLLSEISRYNADMVLLDTGAGSGK---- 160 (228)
T ss_dssp HHHHHTCSEEEECSCCCH-HHHHHHHHH-HCCEEEEEEECCSSCSCHHHHHHHHHHHHHHSCCSEEEEEC----------
T ss_pred HHHhccchheecccccCH-HHHHHHhhc-cCceEEEEEEecccccchhhhHHHHHHHHhccCCCEEccCCCCCCcC----
Confidence 667799999865544344 444445442 133333 22221 1 2222 22345678876653333331
Q ss_pred HHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHH-cCCCEEEEccccc
Q 037779 178 VRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQ-LGCDGVFVGSGVF 256 (310)
Q Consensus 178 ~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~-~GadgV~VGsai~ 256 (310)
.-+|++++.+.. +.|+ +.+||+ +|+|+.++++ .++.||=|.|.+=
T Consensus 161 -----------------------------~fDW~~~~~~~~--~~p~--iLAGGL-~peNV~~Ai~~~~P~gVDVsSGVE 206 (228)
T 4aaj_A 161 -----------------------------LHDLRVSSLVAR--KIPV--IVAGGL-NAENVEEVIKVVKPYGVDVSSGVE 206 (228)
T ss_dssp ------------------------------CCCHHHHHHHH--HSCE--EEESSC-CTTTHHHHHHHHCCSEEEESGGGE
T ss_pred -----------------------------cCChHHHHHhhh--cCCe--EEECCC-CHHHHHHHHHHhCCCEEEeCCCCC
Confidence 225777776654 3688 458999 6999999886 6999999999997
Q ss_pred cCC--CHHHHHHHHHHHHHc
Q 037779 257 KSG--DPVRRARAIVQAVTN 274 (310)
Q Consensus 257 ~~~--dp~~~~~~~~~~~~~ 274 (310)
... | .+.+++|++.+++
T Consensus 207 s~G~KD-~~KI~~Fi~~vr~ 225 (228)
T 4aaj_A 207 KYGIKD-PKLVEEFVRRAKN 225 (228)
T ss_dssp ETTEEC-HHHHHHHHHHHHH
T ss_pred CCCCcC-HHHHHHHHHHHhc
Confidence 532 4 3567888887763
No 137
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.23 E-value=1.3e-05 Score=81.20 Aligned_cols=55 Identities=16% Similarity=0.210 Sum_probs=47.7
Q ss_pred HHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcC-CCEEEEccccccCCCHHHHHH
Q 037779 210 YDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVFKSGDPVRRAR 266 (310)
Q Consensus 210 ~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~G-adgV~VGsai~~~~dp~~~~~ 266 (310)
.++++.+++..++|| ++.|||.+++++.++++.| ||+|++|++++..+|....++
T Consensus 269 ~~~~~~i~~~~~iPv--i~~Ggi~~~~~a~~~l~~g~aD~V~~gR~~l~~P~l~~k~~ 324 (671)
T 1ps9_A 269 SWVTRKLKGHVSLPL--VTTNRINDPQVADDILSRGDADMVSMARPFLADAELLSKAQ 324 (671)
T ss_dssp HHHHHHHTTSCSSCE--EECSSCCSHHHHHHHHHTTSCSEEEESTHHHHCTTHHHHHH
T ss_pred HHHHHHHHHhcCceE--EEeCCCCCHHHHHHHHHcCCCCEEEeCHHHHhCcHHHHHHH
Confidence 567888888778999 6789999999999999998 999999999999888765443
No 138
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=98.21 E-value=1.4e-05 Score=75.34 Aligned_cols=55 Identities=20% Similarity=0.212 Sum_probs=47.0
Q ss_pred cHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcC-CCEEEEccccccCCCHHHHHH
Q 037779 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVFKSGDPVRRAR 266 (310)
Q Consensus 209 ~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~G-adgV~VGsai~~~~dp~~~~~ 266 (310)
++++++.+++..++|| |+.||| +++++.++++.| ||+|++|++++..++....++
T Consensus 282 ~~~~~~~v~~~~~iPv--i~~Ggi-t~~~a~~~l~~g~aD~V~~gR~~l~~P~~~~~~~ 337 (364)
T 1vyr_A 282 SEAFRQKVRERFHGVI--IGAGAY-TAEKAEDLIGKGLIDAVAFGRDYIANPDLVARLQ 337 (364)
T ss_dssp CHHHHHHHHHHCCSEE--EEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHH
T ss_pred cHHHHHHHHHHCCCCE--EEECCc-CHHHHHHHHHCCCccEEEECHHHHhChhHHHHHH
Confidence 4667788888778999 668999 899999999987 999999999999888765544
No 139
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=98.19 E-value=1e-05 Score=77.73 Aligned_cols=52 Identities=25% Similarity=0.291 Sum_probs=42.7
Q ss_pred HHHHHHHhcC--CCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHH
Q 037779 211 DLVMQTKQLG--RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRA 265 (310)
Q Consensus 211 ~l~~~i~~~~--~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~ 265 (310)
++.+.+++.. ++|| |+.|||.|++++.++++. ||.|++|++++..++....+
T Consensus 306 ~~a~~Ik~~v~~~iPV--I~~GgI~t~e~Ae~~L~~-aDlVaiGR~~IanPdlv~ki 359 (419)
T 3l5a_A 306 PVNQIVYEHLAGRIPL--IASGGINSPESALDALQH-ADMVGMSSPFVTEPDFVHKL 359 (419)
T ss_dssp BHHHHHHHHHTTSSCE--EECSSCCSHHHHHHHGGG-CSEEEESTHHHHCTTHHHHH
T ss_pred HHHHHHHHHcCCCCeE--EEECCCCCHHHHHHHHHh-CCcHHHHHHHHHCcHHHHHH
Confidence 4556666643 6899 678999999999999999 99999999999988765444
No 140
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=98.15 E-value=3.2e-06 Score=76.99 Aligned_cols=95 Identities=16% Similarity=0.153 Sum_probs=68.6
Q ss_pred hhHHHHHHHhcCCC-CcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhc
Q 037779 126 PADEENHINKHNFR-VPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAK 204 (310)
Q Consensus 126 ~~~~~~~~~~~~~~-l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~ 204 (310)
....++.+++..+. ..+.++++|++|++.+.+.|+|+|.+... +++.
T Consensus 179 i~~av~~ar~~~~~~~~I~VEV~tleea~eA~~aGaD~I~LDn~--------------------------~~e~------ 226 (285)
T 1o4u_A 179 AERAVQEVRKIIPFTTKIEVEVENLEDALRAVEAGADIVMLDNL--------------------------SPEE------ 226 (285)
T ss_dssp HHHHHHHHHTTSCTTSCEEEEESSHHHHHHHHHTTCSEEEEESC--------------------------CHHH------
T ss_pred HHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCCEEEECCC--------------------------CHHH------
Confidence 44556666664333 78999999999999999999999998621 1111
Q ss_pred cCCCcHHHHHHHHh-cCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCC
Q 037779 205 NIAAPYDLVMQTKQ-LGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSG 259 (310)
Q Consensus 205 ~~~~~~~l~~~i~~-~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~ 259 (310)
-.+.++.++. ..++|+ .++||| |++++.++.++|+|++.+|+.++.++
T Consensus 227 ----l~~av~~l~~~~~~v~i--eASGGI-t~eni~~~a~tGVD~IsvGslt~sa~ 275 (285)
T 1o4u_A 227 ----VKDISRRIKDINPNVIV--EVSGGI-TEENVSLYDFETVDVISSSRLTLQEV 275 (285)
T ss_dssp ----HHHHHHHHHHHCTTSEE--EEEECC-CTTTGGGGCCTTCCEEEEGGGTSSCC
T ss_pred ----HHHHHHHhhccCCCceE--EEECCC-CHHHHHHHHHcCCCEEEEeHHHcCCC
Confidence 0122333332 124677 678999 69999999999999999999988765
No 141
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=98.14 E-value=5.6e-06 Score=75.10 Aligned_cols=94 Identities=14% Similarity=0.162 Sum_probs=67.3
Q ss_pred hHHHHHHHhcCCC-CcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhcc
Q 037779 127 ADEENHINKHNFR-VPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKN 205 (310)
Q Consensus 127 ~~~~~~~~~~~~~-l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~ 205 (310)
.+.++.+++..+. ..+.++++|++|++.+.+.|+|+|++... + ++.+
T Consensus 169 ~~ai~~~r~~~~~~~~i~vev~tlee~~~A~~aGaD~I~ld~~--~------------------------~~~l------ 216 (273)
T 2b7n_A 169 KSFLTHARKNLPFTAKIEIECESFEEAKNAMNAGADIVMCDNL--S------------------------VLET------ 216 (273)
T ss_dssp HHHHHHHGGGSCTTCCEEEEESSHHHHHHHHHHTCSEEEEETC--C------------------------HHHH------
T ss_pred HHHHHHHHHhCCCCceEEEEcCCHHHHHHHHHcCCCEEEECCC--C------------------------HHHH------
Confidence 4555666654333 68899999999999999999999998521 0 1000
Q ss_pred CCCcHHHHHHHHh-cCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCC
Q 037779 206 IAAPYDLVMQTKQ-LGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSG 259 (310)
Q Consensus 206 ~~~~~~l~~~i~~-~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~ 259 (310)
.+..+.+.. ..++|+ .++||| +++++.++.++|+|++.+|+.++.++
T Consensus 217 ----~~~v~~l~~~~~~~~i--~AsGGI-~~~ni~~~~~aGaD~i~vGs~i~~a~ 264 (273)
T 2b7n_A 217 ----KEIAAYRDAHYPFVLL--EASGNI-SLESINAYAKSGVDAISVGALIHQAT 264 (273)
T ss_dssp ----HHHHHHHHHHCTTCEE--EEESSC-CTTTHHHHHTTTCSEEECTHHHHTCC
T ss_pred ----HHHHHHhhccCCCcEE--EEECCC-CHHHHHHHHHcCCcEEEEcHHhcCCC
Confidence 112222322 234788 578999 79999999999999999999988654
No 142
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.11 E-value=1.2e-05 Score=71.53 Aligned_cols=52 Identities=17% Similarity=0.278 Sum_probs=46.0
Q ss_pred CcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCH
Q 037779 208 APYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDP 261 (310)
Q Consensus 208 ~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp 261 (310)
..+++++.+++..++|| ++.|||.+++++.++++.|||+|++|++++..++.
T Consensus 66 ~~~~~i~~i~~~~~ipv--i~~Ggi~~~~~~~~~l~~Gad~V~ig~~~l~dp~~ 117 (247)
T 3tdn_A 66 YDTEMIRFVRPLTTLPI--IASGGAGKMEHFLEAFLRGADKVSINTAAVENPSL 117 (247)
T ss_dssp CCHHHHHHHGGGCCSCE--EEESCCCSHHHHHHHHHTTCSEECCSHHHHHCTHH
T ss_pred ccHHHHHHHHHhCCCCE--EEeCCCCCHHHHHHHHHcCCCeeehhhHHhhChHH
Confidence 45788889988888999 67899999999999999999999999999986653
No 143
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=98.06 E-value=1.9e-05 Score=72.31 Aligned_cols=91 Identities=19% Similarity=0.142 Sum_probs=65.5
Q ss_pred hhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhcc
Q 037779 126 PADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKN 205 (310)
Q Consensus 126 ~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~ 205 (310)
..+.++.+++..+...+.++++|.+|++.+.+.|+|+|++...
T Consensus 195 i~~ai~~~r~~~~~~kI~vev~tlee~~eA~~aGaD~I~ld~~------------------------------------- 237 (296)
T 1qap_A 195 VRQAVEKAFWLHPDVPVEVEVENLDELDDALKAGADIIMLDNF------------------------------------- 237 (296)
T ss_dssp HHHHHHHHHHHSTTSCEEEEESSHHHHHHHHHTTCSEEEESSC-------------------------------------
T ss_pred HHHHHHHHHHhCCCCcEEEEeCCHHHHHHHHHcCCCEEEECCC-------------------------------------
Confidence 3445555555333347889999999999999999999998521
Q ss_pred CCCcHHHHHHHHhc--CCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCC
Q 037779 206 IAAPYDLVMQTKQL--GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSG 259 (310)
Q Consensus 206 ~~~~~~l~~~i~~~--~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~ 259 (310)
+.+.++.+.+. .++|+ .|+||| +++++.++.++|+|++.+|+.++.++
T Consensus 238 ---~~e~l~~~v~~~~~~~~I--~ASGGI-t~~~i~~~a~~GvD~isvGsli~~a~ 287 (296)
T 1qap_A 238 ---NTDQMREAVKRVNGQARL--EVSGNV-TAETLREFAETGVDFISVGALTKHVR 287 (296)
T ss_dssp ---CHHHHHHHHHTTCTTCCE--EECCCS-CHHHHHHHHHTTCSEEECSHHHHEEE
T ss_pred ---CHHHHHHHHHHhCCCCeE--EEECCC-CHHHHHHHHHcCCCEEEEeHHHcCCC
Confidence 11112222222 25788 679999 79999999999999999999776543
No 144
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=98.05 E-value=0.00042 Score=62.78 Aligned_cols=165 Identities=18% Similarity=0.217 Sum_probs=100.9
Q ss_pred CCHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEee------ccccc-------hHHHHH
Q 037779 43 VTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAK------ARIGH-------FVEAQI 109 (310)
Q Consensus 43 ~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~k------d~i~~-------~~~~~~ 109 (310)
.+++-+..++++||+.| .|. +--..+|. -+++..++.+++.+++||.+. +|+-+ .++++.
T Consensus 47 ~s~~~a~~A~~gGAdRI-ELc----~~l~~GGl--TPS~g~i~~a~~~~~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~ 119 (287)
T 3iwp_A 47 DSVESAVNAERGGADRI-ELC----SGLSEGGT--TPSMGVLQVVKQSVQIPVFVMIRPRGGDFLYSDREIEVMKADIRL 119 (287)
T ss_dssp SSHHHHHHHHHHTCSEE-EEC----BCGGGTCB--CCCHHHHHHHHTTCCSCEEEECCSSSSCSCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCCEE-EEC----CCCCCCCC--CCCHHHHHHHHHhcCCCeEEEEecCCCCcccCHHHHHHHHHHHHH
Confidence 45788999999999999 451 22223343 456889999999999998763 23321 136677
Q ss_pred HHHcCCCeeeec----CC-CChhHHHHHHHhcCCCCcEEee-----cCCHHHHHH-HHHhCCCEEEEecCCCCCchHHHH
Q 037779 110 LEAIGVDYVDES----EV-LTPADEENHINKHNFRVPFVCG-----CRNLGESLR-RIREGAAMIRTKGEAGTGNIVEAV 178 (310)
Q Consensus 110 ~~~aGad~v~~~----~~-~~~~~~~~~~~~~~~~l~v~~~-----v~t~~ea~~-a~~~Gad~I~v~g~~~~~~~~~~~ 178 (310)
+.++|||+|+.. +. +......+++...+ ++.+..- +.++.++.. .+++|.+-|-+.|...+
T Consensus 120 ~~~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~-~l~vTFHRAFD~~~d~~~Ale~Li~lGvdrILTSG~~~~------- 191 (287)
T 3iwp_A 120 AKLYGADGLVFGALTEDGHIDKELCMSLMAICR-PLPVTFHRAFDMVHDPMAALETLLTLGFERVLTSGCDSS------- 191 (287)
T ss_dssp HHHTTCSEEEECCBCTTSCBCHHHHHHHHHHHT-TSCEEECGGGGGCSCHHHHHHHHHHHTCSEEEECTTSSS-------
T ss_pred HHHcCCCEEEEeeeCCCCCcCHHHHHHHHHHcC-CCcEEEECchhccCCHHHHHHHHHHcCCCEEECCCCCCC-------
Confidence 788999998832 21 34445555555422 2333321 234555443 44668877766543111
Q ss_pred HHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhc--CCCCEEEEccCCCCCHHHHHHHHH-cCCCEEEEc
Q 037779 179 RHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQL--GRLPVVHFAAGGVATPADAAMMMQ-LGCDGVFVG 252 (310)
Q Consensus 179 ~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~--~~iPVv~ia~GGI~t~~di~~~~~-~GadgV~VG 252 (310)
.....+.++.+.+. .+++| ++.||| +++++.++++ +|++.+=..
T Consensus 192 ---------------------------a~~Gl~~Lk~Lv~~a~~rI~I--maGGGV-~~~Ni~~l~~~tG~~~~H~S 238 (287)
T 3iwp_A 192 ---------------------------ALEGLPLIKRLIEQAKGRIVV--MPGGGI-TDRNLQRILEGSGATEFHCS 238 (287)
T ss_dssp ---------------------------TTTTHHHHHHHHHHHTTSSEE--EECTTC-CTTTHHHHHHHHCCSEEEEC
T ss_pred ---------------------------hHHhHHHHHHHHHHhCCCCEE--EECCCc-CHHHHHHHHHhhCCCEEeEC
Confidence 01123444444332 35677 679999 5999999987 899887654
No 145
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=98.04 E-value=5.5e-05 Score=72.22 Aligned_cols=55 Identities=20% Similarity=0.149 Sum_probs=46.4
Q ss_pred cHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcC-CCEEEEccccccCCCHHHHHH
Q 037779 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVFKSGDPVRRAR 266 (310)
Q Consensus 209 ~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~G-adgV~VGsai~~~~dp~~~~~ 266 (310)
++++++.+++..++|| |+.||| +++++.++++.| ||.|++|++++..++....++
T Consensus 307 ~~~~~~~vk~~~~iPv--i~~G~i-~~~~a~~~l~~g~aD~V~igR~~l~dP~l~~k~~ 362 (402)
T 2hsa_B 307 EARLMRTLRNAYQGTF--ICSGGY-TRELGIEAVAQGDADLVSYGRLFISNPDLVMRIK 362 (402)
T ss_dssp HHHHHHHHHHHCSSCE--EEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHH
T ss_pred hHHHHHHHHHHCCCCE--EEeCCC-CHHHHHHHHHCCCCceeeecHHHHhCchHHHHHH
Confidence 3566777888778999 678999 899999999987 999999999999888765543
No 146
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=98.03 E-value=6.2e-05 Score=66.39 Aligned_cols=47 Identities=17% Similarity=0.348 Sum_probs=32.8
Q ss_pred cCCCCCHH--HHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHcCCC
Q 037779 229 AGGVATPA--DAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTNYSD 277 (310)
Q Consensus 229 ~GGI~t~~--di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~~~~ 277 (310)
..||+ ++ +. +++++|+|.+++||+|++++||.+.++++++.++..-+
T Consensus 179 ~PGI~-~~g~~p-~~~~aGad~iVvGr~I~~a~dp~~a~~~~~~~~~~~~~ 227 (228)
T 3m47_A 179 SPGVG-AQGGDP-GETLRFADAIIVGRSIYLADNPAAAAAGAIESIKDLLN 227 (228)
T ss_dssp ECC-----------CGGGTCSEEEECHHHHTSSCHHHHHHHHHHHC-----
T ss_pred ecCcC-cCCCCH-hHHHcCCCEEEECHHHhCCCCHHHHHHHHHHHHHHHhC
Confidence 48886 54 66 78899999999999999999999999999988875443
No 147
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=98.03 E-value=7.6e-05 Score=70.23 Aligned_cols=51 Identities=24% Similarity=0.157 Sum_probs=41.4
Q ss_pred HHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcC-CCEEEEccccccCCCHHHHHH
Q 037779 213 VMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVFKSGDPVRRAR 266 (310)
Q Consensus 213 ~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~G-adgV~VGsai~~~~dp~~~~~ 266 (310)
++.+++..++|| |+.||| +++++.++++.| ||.|++|++++..+|....++
T Consensus 279 ~~~ik~~~~iPv--i~~Ggi-t~e~a~~~l~~G~aD~V~iGR~~ladPdl~~k~~ 330 (361)
T 3gka_A 279 GQQLKAAFGGPF--IVNENF-TLDSAQAALDAGQADAVAWGKLFIANPDLPRRFK 330 (361)
T ss_dssp HHHHHHHHCSCE--EEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHH
T ss_pred HHHHHHHcCCCE--EEeCCC-CHHHHHHHHHcCCccEEEECHHhHhCcHHHHHHH
Confidence 445555556899 568999 899999999987 999999999999888665443
No 148
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=98.02 E-value=1.7e-05 Score=72.16 Aligned_cols=95 Identities=15% Similarity=0.093 Sum_probs=68.9
Q ss_pred hhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhcc
Q 037779 126 PADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKN 205 (310)
Q Consensus 126 ~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~ 205 (310)
....++.+++..+..++.+++.|.+|++.+++.|+|+|..... +++.
T Consensus 181 i~~av~~ar~~~~~~~I~Vev~t~eea~eal~aGaD~I~LDn~--------------------------~~~~------- 227 (284)
T 1qpo_A 181 VVDALRAVRNAAPDLPCEVEVDSLEQLDAVLPEKPELILLDNF--------------------------AVWQ------- 227 (284)
T ss_dssp HHHHHHHHHHHCTTSCEEEEESSHHHHHHHGGGCCSEEEEETC--------------------------CHHH-------
T ss_pred HHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHcCCCEEEECCC--------------------------CHHH-------
Confidence 3556666666444458999999999999999999999998631 1111
Q ss_pred CCCcHHHHHHHHhc-CCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCC
Q 037779 206 IAAPYDLVMQTKQL-GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSG 259 (310)
Q Consensus 206 ~~~~~~l~~~i~~~-~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~ 259 (310)
-.+.++.++.. .++++ .++||| |++++.++.++|+|.+.+|+.++.++
T Consensus 228 ---~~~~v~~l~~~~~~v~i--eaSGGI-t~~~i~~~a~tGVD~isvG~l~~~a~ 276 (284)
T 1qpo_A 228 ---TQTAVQRRDSRAPTVML--ESSGGL-SLQTAATYAETGVDYLAVGALTHSVR 276 (284)
T ss_dssp ---HHHHHHHHHHHCTTCEE--EEESSC-CTTTHHHHHHTTCSEEECGGGTSSBC
T ss_pred ---HHHHHHHhhccCCCeEE--EEECCC-CHHHHHHHHhcCCCEEEECHHHcCCC
Confidence 11233333331 24566 679999 69999999999999999999888765
No 149
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=98.02 E-value=2.1e-05 Score=71.46 Aligned_cols=94 Identities=15% Similarity=0.113 Sum_probs=69.2
Q ss_pred ChhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhc
Q 037779 125 TPADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAK 204 (310)
Q Consensus 125 ~~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~ 204 (310)
+..+.++.+++..+..++.+++.|.+|++.+++.|+|+|..... +++.
T Consensus 184 ~i~~Av~~ar~~~~~~~IeVEv~tl~ea~eAl~aGaD~I~LDn~--------------------------~~~~------ 231 (287)
T 3tqv_A 184 GIAKAVTKAKKLDSNKVVEVEVTNLDELNQAIAAKADIVMLDNF--------------------------SGED------ 231 (287)
T ss_dssp CHHHHHHHHHHHCTTSCEEEEESSHHHHHHHHHTTCSEEEEESC--------------------------CHHH------
T ss_pred CHHHHHHHHHhhCCCCcEEEEeCCHHHHHHHHHcCCCEEEEcCC--------------------------CHHH------
Confidence 35566677766666789999999999999999999999998521 1110
Q ss_pred cCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCC
Q 037779 205 NIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSG 259 (310)
Q Consensus 205 ~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~ 259 (310)
-.+.++.+. .++++ .++||| +++++.++.+.|+|.+.+|+.....+
T Consensus 232 ----l~~av~~~~--~~v~i--eaSGGI-t~~~i~~~a~tGVD~IsvGalt~sa~ 277 (287)
T 3tqv_A 232 ----IDIAVSIAR--GKVAL--EVSGNI-DRNSIVAIAKTGVDFISVGAITKHIK 277 (287)
T ss_dssp ----HHHHHHHHT--TTCEE--EEESSC-CTTTHHHHHTTTCSEEECSHHHHSBC
T ss_pred ----HHHHHHhhc--CCceE--EEECCC-CHHHHHHHHHcCCCEEEEChhhcCCc
Confidence 011222222 24566 679999 69999999999999999998776654
No 150
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=98.00 E-value=7.7e-05 Score=70.24 Aligned_cols=50 Identities=20% Similarity=0.104 Sum_probs=41.0
Q ss_pred HHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcC-CCEEEEccccccCCCHHHHH
Q 037779 213 VMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVFKSGDPVRRA 265 (310)
Q Consensus 213 ~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~G-adgV~VGsai~~~~dp~~~~ 265 (310)
.+.+++..++|| |+.||| +++++.++++.| ||.|++|++++..+|....+
T Consensus 271 ~~~ik~~~~iPv--i~~Ggi-t~e~a~~~l~~g~aD~V~iGR~~lanPdl~~k~ 321 (362)
T 4ab4_A 271 GPLIKEAFGGPY--IVNERF-DKASANAALASGKADAVAFGVPFIANPDLPARL 321 (362)
T ss_dssp HHHHHHHHCSCE--EEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHH
T ss_pred HHHHHHHCCCCE--EEeCCC-CHHHHHHHHHcCCccEEEECHHhHhCcHHHHHH
Confidence 445555556899 668999 899999999987 99999999999988866444
No 151
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.99 E-value=8e-05 Score=75.67 Aligned_cols=55 Identities=16% Similarity=0.170 Sum_probs=47.2
Q ss_pred cHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcC-CCEEEEccccccCCCHHHHH
Q 037779 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVFKSGDPVRRA 265 (310)
Q Consensus 209 ~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~G-adgV~VGsai~~~~dp~~~~ 265 (310)
..++...+++..++|| |+.|||.+++++.++++.| ||.|++|++++..+|....+
T Consensus 282 ~~~~~~~i~~~~~~pv--i~~G~i~~~~~a~~~l~~g~~d~v~~gR~~~~~P~~~~~~ 337 (690)
T 3k30_A 282 QEEFVAGLKKLTTKPV--VGVGRFTSPDAMVRQIKAGILDLIGAARPSIADPFLPNKI 337 (690)
T ss_dssp THHHHTTSGGGCSSCE--EECSCCCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHH
T ss_pred cHHHHHHHHHHcCCeE--EEeCCCCCHHHHHHHHHCCCcceEEEcHHhHhCccHHHHH
Confidence 3567777888788999 6789999999999999987 99999999999988876554
No 152
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=97.99 E-value=4.2e-05 Score=72.41 Aligned_cols=51 Identities=18% Similarity=0.165 Sum_probs=42.3
Q ss_pred HHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcC-CCEEEEccccccCCCHHHHHH
Q 037779 213 VMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVFKSGDPVRRAR 266 (310)
Q Consensus 213 ~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~G-adgV~VGsai~~~~dp~~~~~ 266 (310)
++.+++..++|| |+.||| +++++.++++.| ||.|++|++++..++....++
T Consensus 293 ~~~vr~~~~iPv--i~~G~i-~~~~a~~~l~~g~aD~V~~gR~~l~~P~l~~k~~ 344 (376)
T 1icp_A 293 LVPMRKAYKGTF--IVAGGY-DREDGNRALIEDRADLVAYGRLFISNPDLPKRFE 344 (376)
T ss_dssp SHHHHHHCCSCE--EEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHH
T ss_pred HHHHHHHcCCCE--EEeCCC-CHHHHHHHHHCCCCcEEeecHHHHhCccHHHHHH
Confidence 455566667899 678999 899999999987 999999999999888765543
No 153
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=97.98 E-value=1.2e-05 Score=73.91 Aligned_cols=93 Identities=16% Similarity=0.203 Sum_probs=65.4
Q ss_pred HHHHHHHh-cCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccC
Q 037779 128 DEENHINK-HNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNI 206 (310)
Q Consensus 128 ~~~~~~~~-~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~ 206 (310)
+.++.+++ .+....+.++++|++|+..+.+.|+|+|++... + ++.+
T Consensus 185 ~ai~~~r~~~~~~~~i~vev~tlee~~~A~~aGaD~I~ld~~--~------------------------~~~l------- 231 (299)
T 2jbm_A 185 KAVRAARQAADFALKVEVECSSLQEAVQAAEAGADLVLLDNF--K------------------------PEEL------- 231 (299)
T ss_dssp HHHHHHHHHHTTTSCEEEEESSHHHHHHHHHTTCSEEEEESC--C------------------------HHHH-------
T ss_pred HHHHHHHHhCCcCCeEEEecCCHHHHHHHHHcCCCEEEECCC--C------------------------HHHH-------
Confidence 34444444 333478899999999999999999999998521 0 0000
Q ss_pred CCcHHHHHHHHh-cCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCC
Q 037779 207 AAPYDLVMQTKQ-LGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSG 259 (310)
Q Consensus 207 ~~~~~l~~~i~~-~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~ 259 (310)
.+..+.+.. ..++|+ .++||| +++++.++.++|+|++.+|+.++.++
T Consensus 232 ---~~~v~~l~~~~~~~~I--~ASGGI-t~~ni~~~~~aGaD~i~vGs~i~~a~ 279 (299)
T 2jbm_A 232 ---HPTATVLKAQFPSVAV--EASGGI-TLDNLPQFCGPHIDVISMGMLTQAAP 279 (299)
T ss_dssp ---HHHHHHHHHHCTTSEE--EEESSC-CTTTHHHHCCTTCCEEECTHHHHSCC
T ss_pred ---HHHHHHhhccCCCeeE--EEECCC-CHHHHHHHHHCCCCEEEEChhhcCCC
Confidence 112223332 234677 578999 79999999999999999999887654
No 154
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=97.96 E-value=9.3e-05 Score=65.86 Aligned_cols=58 Identities=24% Similarity=0.387 Sum_probs=45.9
Q ss_pred HHHHHhc-CCCCEEEEccCCCCCHH-----------HHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHH
Q 037779 213 VMQTKQL-GRLPVVHFAAGGVATPA-----------DAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVT 273 (310)
Q Consensus 213 ~~~i~~~-~~iPVv~ia~GGI~t~~-----------di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~ 273 (310)
++.+++. .+.++ ++.|||+ ++ ++.+++++|+|.+++||+|++++||.+.++++++.++
T Consensus 173 i~~lr~~~~~~~i--~v~gGI~-~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~a~dp~~a~~~l~~~i~ 242 (245)
T 1eix_A 173 AVRFKQVFGQEFK--LVTPGIR-PQGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVDPAQTLKAINASLQ 242 (245)
T ss_dssp HHHHHHHHCSSSE--EEECCBC-CTTCCCTTCCSCBCHHHHHHTTCSEEEECHHHHTSSSHHHHHHHHHHHTC
T ss_pred HHHHHHhcCCCCE--EEECCcC-CCCCCccchhccCCHHHHHHcCCCEEEECHHHcCCCCHHHHHHHHHHHHH
Confidence 4444443 23455 4579996 67 7999999999999999999999999999999987654
No 155
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=97.93 E-value=0.00014 Score=64.68 Aligned_cols=58 Identities=17% Similarity=0.211 Sum_probs=46.2
Q ss_pred HHHHHhcC-CCCEEEEccCCCCCHH-----------HHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHH
Q 037779 213 VMQTKQLG-RLPVVHFAAGGVATPA-----------DAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVT 273 (310)
Q Consensus 213 ~~~i~~~~-~iPVv~ia~GGI~t~~-----------di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~ 273 (310)
++.+++.. ..++ ++.|||+ ++ ++.+++++|+|.+++||+|++++||.+.++++++.++
T Consensus 167 i~~lr~~~~~~~i--~V~gGI~-~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~a~dp~~a~~~l~~~i~ 236 (246)
T 2yyu_A 167 AAFIKERCGASFL--AVTPGIR-FADDAAHDQVRVVTPRKARALGSDYIVIGRSLTRAADPLRTYARLQHEWN 236 (246)
T ss_dssp HHHHHHHHCTTSE--EEECCCC-CCC-------CCCCHHHHHHHTCSEEEECHHHHTSSSHHHHHHHHHHHCC
T ss_pred HHHHHHhcCCCCE--EEeCCcC-CCCCCcccccccCCHHHHHHcCCCEEEECHhhcCCCCHHHHHHHHHHHHH
Confidence 44555432 2344 4579996 66 7999999999999999999999999999999988765
No 156
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=97.93 E-value=2e-05 Score=71.22 Aligned_cols=50 Identities=16% Similarity=0.195 Sum_probs=44.8
Q ss_pred CcHHHHHHHHhcC--CCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCC
Q 037779 208 APYDLVMQTKQLG--RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSG 259 (310)
Q Consensus 208 ~~~~l~~~i~~~~--~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~ 259 (310)
...++++.+++.. ++|+ +++|||+|++++++++++|||+|+|||++++.+
T Consensus 212 v~~e~V~~I~~~~~~~iPV--~vGGGIrs~Eda~~ll~aGAD~VVVGSAav~d~ 263 (286)
T 3vk5_A 212 VPPEVVRHFRKGLGPDQVL--FVSGNVRSGRQVTEYLDSGADYVGFAGALEQPD 263 (286)
T ss_dssp CCHHHHHHHHHHSCTTCEE--EEESSCCSHHHHHHHHHTTCSEEEESGGGSSTT
T ss_pred CCHHHHHHHHHhcCCCCCE--EEEeCCCCHHHHHHHHHcCCCEEEECchhhcCC
Confidence 3578889998877 8999 679999999999999999999999999999853
No 157
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=97.92 E-value=4.7e-05 Score=69.55 Aligned_cols=94 Identities=19% Similarity=0.178 Sum_probs=66.1
Q ss_pred ChhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhc
Q 037779 125 TPADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAK 204 (310)
Q Consensus 125 ~~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~ 204 (310)
+..+.++.+++..+..++.+++.|.+|++.+++.|+|+|..... +++.+
T Consensus 195 ~i~~Av~~~r~~~p~~~ieVEvdtlde~~eAl~aGaD~I~LDn~--------------------------~~~~l----- 243 (298)
T 3gnn_A 195 GVGEALDAAFALNAEVPVQIEVETLDQLRTALAHGARSVLLDNF--------------------------TLDMM----- 243 (298)
T ss_dssp CHHHHHHHHHHHC--CCCEEEESSHHHHHHHHHTTCEEEEEESC--------------------------CHHHH-----
T ss_pred CHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHcCCCEEEECCC--------------------------CHHHH-----
Confidence 34566666666555678889999999999999999999998521 11100
Q ss_pred cCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCC
Q 037779 205 NIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSG 259 (310)
Q Consensus 205 ~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~ 259 (310)
.+.++.+. .++++ .++||| +++++.++.++|+|.+.||+..+.++
T Consensus 244 -----~~av~~i~--~~v~i--eaSGGI-~~~~i~~~a~tGVD~isvG~lt~sa~ 288 (298)
T 3gnn_A 244 -----RDAVRVTE--GRAVL--EVSGGV-NFDTVRAIAETGVDRISIGALTKDVR 288 (298)
T ss_dssp -----HHHHHHHT--TSEEE--EEESSC-STTTHHHHHHTTCSEEECGGGGTSCC
T ss_pred -----HHHHHHhC--CCCeE--EEEcCC-CHHHHHHHHHcCCCEEEECCeecCCC
Confidence 11222221 24455 789999 69999999999999999999776654
No 158
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=97.91 E-value=9.7e-05 Score=65.46 Aligned_cols=59 Identities=19% Similarity=0.237 Sum_probs=47.0
Q ss_pred HHHHHhcC-CCCEEEEccCCCCCHHHH-----------HHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHc
Q 037779 213 VMQTKQLG-RLPVVHFAAGGVATPADA-----------AMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTN 274 (310)
Q Consensus 213 ~~~i~~~~-~iPVv~ia~GGI~t~~di-----------~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~ 274 (310)
++.+++.. +.++ ++.|||+ ++.. .+++++|+|.+++||+|++++||.+.++++++.++.
T Consensus 166 i~~lr~~~~~~~i--~v~gGI~-~~~~~~~dq~rv~tp~~a~~aGad~iVvGr~I~~a~dp~~a~~~l~~~i~~ 236 (239)
T 1dbt_A 166 AKAIYQAVSPSFL--TVTPGIR-MSEDAANDQVRVATPAIAREKGSSAIVVGRSITKAEDPVKAYKAVRLEWEG 236 (239)
T ss_dssp HHHHTTTSCTTCE--EEECCBC-CTTSCCTTCSSCBCHHHHHHTTCSEEEECHHHHTSSCHHHHHHHHHHHHHT
T ss_pred HHHHHHhcCCCcE--EEeCCcC-CCCCCccceeccCCHHHHHHcCCCEEEEChhhcCCCCHHHHHHHHHHHHHH
Confidence 34455533 3455 4579996 6776 888999999999999999999999999999988763
No 159
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=97.90 E-value=5.4e-05 Score=69.00 Aligned_cols=93 Identities=14% Similarity=0.098 Sum_probs=67.6
Q ss_pred hhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhcc
Q 037779 126 PADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKN 205 (310)
Q Consensus 126 ~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~ 205 (310)
..+.++.+++..+..++.+++.|++|++.++++|+|+|..... +++.+
T Consensus 194 i~~Av~~ar~~~p~~kIeVEv~tl~e~~eAl~aGaDiImLDn~--------------------------s~~~l------ 241 (300)
T 3l0g_A 194 ITLAIQRLRKNLKNEYIAIECDNISQVEESLSNNVDMILLDNM--------------------------SISEI------ 241 (300)
T ss_dssp HHHHHHHHHHHSSSCCEEEEESSHHHHHHHHHTTCSEEEEESC--------------------------CHHHH------
T ss_pred HHHHHHHHHHhCCCCCEEEEECCHHHHHHHHHcCCCEEEECCC--------------------------CHHHH------
Confidence 4566666766556789999999999999999999999988521 11110
Q ss_pred CCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCC
Q 037779 206 IAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSG 259 (310)
Q Consensus 206 ~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~ 259 (310)
.+.++.+. .++.+ .++||| |++++.++.+.|+|.+.+|+....++
T Consensus 242 ----~~av~~~~--~~v~l--eaSGGI-t~~~i~~~A~tGVD~IsvGalthsa~ 286 (300)
T 3l0g_A 242 ----KKAVDIVN--GKSVL--EVSGCV-NIRNVRNIALTGVDYISIGCITNSFQ 286 (300)
T ss_dssp ----HHHHHHHT--TSSEE--EEESSC-CTTTHHHHHTTTCSEEECGGGTSSCC
T ss_pred ----HHHHHhhc--CceEE--EEECCC-CHHHHHHHHHcCCCEEEeCccccCCC
Confidence 12222232 24445 689999 69999999999999999998766543
No 160
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=97.90 E-value=5.7e-05 Score=69.63 Aligned_cols=93 Identities=18% Similarity=0.137 Sum_probs=66.6
Q ss_pred hhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhcc
Q 037779 126 PADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKN 205 (310)
Q Consensus 126 ~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~ 205 (310)
..+.++.+++..+..++.+++.|.+|++.+++.|+|+|..... +++.+
T Consensus 218 i~~Av~~ar~~~p~~kIeVEVdtldea~eAl~aGaD~I~LDn~--------------------------~~~~l------ 265 (320)
T 3paj_A 218 IRQAISTAKQLNPGKPVEVETETLAELEEAISAGADIIMLDNF--------------------------SLEMM------ 265 (320)
T ss_dssp HHHHHHHHHHHSTTSCEEEEESSHHHHHHHHHTTCSEEEEESC--------------------------CHHHH------
T ss_pred HHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHcCCCEEEECCC--------------------------CHHHH------
Confidence 4556666666556678889999999999999999999998521 11100
Q ss_pred CCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCC
Q 037779 206 IAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSG 259 (310)
Q Consensus 206 ~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~ 259 (310)
.+.++.+. .++++ .++||| +++++.++.++|+|.+.+|+....++
T Consensus 266 ----~~av~~l~--~~v~i--eaSGGI-t~~~I~~~a~tGVD~isvGalt~sa~ 310 (320)
T 3paj_A 266 ----REAVKINA--GRAAL--ENSGNI-TLDNLKECAETGVDYISVGALTKHLK 310 (320)
T ss_dssp ----HHHHHHHT--TSSEE--EEESSC-CHHHHHHHHTTTCSEEECTHHHHSBC
T ss_pred ----HHHHHHhC--CCCeE--EEECCC-CHHHHHHHHHcCCCEEEECceecCCC
Confidence 11222222 24566 679999 69999999999999999999665443
No 161
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=97.89 E-value=1.5e-05 Score=72.96 Aligned_cols=94 Identities=16% Similarity=0.101 Sum_probs=56.2
Q ss_pred hHHHHHHHh-cCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhcc
Q 037779 127 ADEENHINK-HNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKN 205 (310)
Q Consensus 127 ~~~~~~~~~-~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~ 205 (310)
.+.++.+++ .+....+.++++|++|+..+.+.|+|+|++... +. +.
T Consensus 186 ~~ai~~~r~~~~~~~~i~vev~tlee~~~A~~aGaD~I~ld~~--~~------------------------~~------- 232 (294)
T 3c2e_A 186 TNAVKNARAVCGFAVKIEVECLSEDEATEAIEAGADVIMLDNF--KG------------------------DG------- 232 (294)
T ss_dssp HHHHHHHHHHHCTTSCEEEECSSSHHHHHHHHHTCSEEECCC--------------------------------------
T ss_pred HHHHHHHHHhcCcCCeEEEecCCHHHHHHHHHcCCCEEEECCC--CH------------------------HH-------
Confidence 344444544 333478899999999999999999999997521 00 00
Q ss_pred CCCcHHHHHHHHhc----CCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCC
Q 037779 206 IAAPYDLVMQTKQL----GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSG 259 (310)
Q Consensus 206 ~~~~~~l~~~i~~~----~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~ 259 (310)
-.+..+.+... .++|+ .++||| +++++.++.++|+|++.+|+.++.++
T Consensus 233 ---l~~~v~~l~~~~~g~~~v~I--~ASGGI-t~~ni~~~~~~GvD~i~vGs~i~~a~ 284 (294)
T 3c2e_A 233 ---LKMCAQSLKNKWNGKKHFLL--ECSGGL-NLDNLEEYLCDDIDIYSTSSIHQGTP 284 (294)
T ss_dssp -------------------CCEE--EEECCC-CC------CCCSCSEEECGGGTSSCC
T ss_pred ---HHHHHHHhcccccCCCCeEE--EEECCC-CHHHHHHHHHcCCCEEEEechhcCCC
Confidence 01111222221 23677 678999 79999999999999999999987654
No 162
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=97.84 E-value=0.00069 Score=57.95 Aligned_cols=162 Identities=13% Similarity=0.104 Sum_probs=94.8
Q ss_pred CCCHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeecccc----chHHHHHHH-HcCCC
Q 037779 42 VVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIG----HFVEAQILE-AIGVD 116 (310)
Q Consensus 42 ~~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~----~~~~~~~~~-~aGad 116 (310)
+.+.+..+.+.+..+..+..+. .++ ..-.+.++.++++...+++--|.+. +.+-++-+. ..++|
T Consensus 16 vr~~~~l~~al~s~~~~ifll~---g~i--------~~l~~~v~~lk~~~K~v~Vh~Dli~Gls~d~~ai~fL~~~~~pd 84 (192)
T 3kts_A 16 AHNQKDMEKILELDLTYMVMLE---THV--------AQLKALVKYAQAGGKKVLLHADLVNGLKNDDYAIDFLCTEICPD 84 (192)
T ss_dssp ESSSHHHHHHTTSSCCEEEECS---EET--------TTHHHHHHHHHHTTCEEEEEGGGEETCCCSHHHHHHHHHTTCCS
T ss_pred ecCHHHHHHHHcCCCCEEEEec---CcH--------HHHHHHHHHHHHcCCeEEEecCchhccCCcHHHHHHHHhCCCCC
Confidence 3456777888887788774441 112 2225667788887776665444442 212222222 35888
Q ss_pred eeeecCCCChhHHHHHHHhcCCC-C--cEEeecCCHHHHH-HHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceeccc
Q 037779 117 YVDESEVLTPADEENHINKHNFR-V--PFVCGCRNLGESL-RRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLR 192 (310)
Q Consensus 117 ~v~~~~~~~~~~~~~~~~~~~~~-l--~v~~~v~t~~ea~-~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~ 192 (310)
+++.+ ....++.+++.+.- + .++++..+.+-.. ...+..+|++-+. |
T Consensus 85 GIIsT----k~~~i~~Ak~~gL~tIqR~FliDS~al~~~~~~i~~~~PD~iEiL-------------------------P 135 (192)
T 3kts_A 85 GIIST----RGNAIMKAKQHKMLAIQRLFMIDSSAYNKGVALIQKVQPDCIELL-------------------------P 135 (192)
T ss_dssp EEEES----CHHHHHHHHHTTCEEEEEEECCSHHHHHHHHHHHHHHCCSEEEEE-------------------------C
T ss_pred EEEeC----cHHHHHHHHHCCCeEEEEEEEEEcchHHHHHHHHhhcCCCEEEEC-------------------------C
Confidence 88643 23455555554321 1 1122221212111 1223345554332 1
Q ss_pred ccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCC
Q 037779 193 NMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSG 259 (310)
Q Consensus 193 ~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~ 259 (310)
. ...+.++.+++..++|+ ||+|+|.+.+++.+++++||++|..|+.-....
T Consensus 136 G--------------i~p~iI~~i~~~~~~Pi--IaGGlI~~~edv~~al~aGA~aVsTs~~~LW~~ 186 (192)
T 3kts_A 136 G--------------IIPEQVQKMTQKLHIPV--IAGGLIETSEQVNQVIASGAIAVTTSNKHLWEG 186 (192)
T ss_dssp T--------------TCHHHHHHHHHHHCCCE--EEESSCCSHHHHHHHHTTTEEEEEECCGGGGTT
T ss_pred c--------------hhHHHHHHHHHhcCCCE--EEECCcCCHHHHHHHHHcCCeEEEeCCHHHhCc
Confidence 1 12357788888778999 789999999999999999999999999766644
No 163
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.83 E-value=0.00014 Score=74.35 Aligned_cols=56 Identities=16% Similarity=0.186 Sum_probs=48.4
Q ss_pred cHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcC-CCEEEEccccccCCCHHHHHH
Q 037779 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVFKSGDPVRRAR 266 (310)
Q Consensus 209 ~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~G-adgV~VGsai~~~~dp~~~~~ 266 (310)
.+.+.+.+++..++|| |+.|||.+++++.++++.| ||.|++|++++..++....++
T Consensus 279 ~~~~~~~i~~~~~~pv--i~~G~i~~~~~a~~~l~~g~aD~V~~gR~~l~~P~~~~~~~ 335 (729)
T 1o94_A 279 TIPWVKLVKQVSKKPV--LGVGRYTDPEKMIEIVTKGYADIIGCARPSIADPFLPQKVE 335 (729)
T ss_dssp THHHHHHHHTTCSSCE--ECCSCCCCHHHHHHHHHTTSCSBEEESHHHHHCTTHHHHHH
T ss_pred cHHHHHHHHHHCCCEE--EEeCCCCCHHHHHHHHHCCCCCEEEeCchhhcCchHHHHHH
Confidence 4677888888888999 7899999999999999987 999999999999888765443
No 164
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=97.82 E-value=0.00024 Score=64.49 Aligned_cols=32 Identities=25% Similarity=0.365 Sum_probs=26.6
Q ss_pred CCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEcc
Q 037779 220 GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGS 253 (310)
Q Consensus 220 ~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGs 253 (310)
.++|| .++|||.|.+++.+++++||+-+-..+
T Consensus 233 ~~v~V--KAAGGIrt~edAl~mi~aGA~RiGtS~ 264 (288)
T 3oa3_A 233 SETRV--KASGGIRTIEDCVKMVRAGAERLGASA 264 (288)
T ss_dssp SCCEE--EEESSCCSHHHHHHHHHTTCSEEEESC
T ss_pred CCceE--EEeCCCCCHHHHHHHHHcCCceeehhh
Confidence 46788 579999999999999999999554444
No 165
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=97.80 E-value=7.9e-05 Score=72.81 Aligned_cols=128 Identities=18% Similarity=0.206 Sum_probs=76.7
Q ss_pred HHHHHHHHcCCCeeee-cCCCChh---HHHHHHHhcCCCCcEEe-ecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHH
Q 037779 105 VEAQILEAIGVDYVDE-SEVLTPA---DEENHINKHNFRVPFVC-GCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVR 179 (310)
Q Consensus 105 ~~~~~~~~aGad~v~~-~~~~~~~---~~~~~~~~~~~~l~v~~-~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~ 179 (310)
+.+..+.+.|+|.+.. ...-... +.++.++.. .++++++ ++.+.+.+..+. |+|.|.+ |...+. +...
T Consensus 231 ~~a~~l~~~gvd~lvvdta~G~~~~~L~~I~~l~~~-~~vpvi~k~v~~~~~a~~l~--G~d~v~v-g~g~g~-~~~~-- 303 (486)
T 2cu0_A 231 KRAIELDKAGVDVIVVDTAHAHNLKAIKSMKEMRQK-VDADFIVGNIANPKAVDDLT--FADAVKV-GIGPGS-ICTT-- 303 (486)
T ss_dssp HHHHHHHHTTCSEEEEECSCCCCHHHHHHHHHHHHT-CCSEEEEEEECCHHHHTTCT--TSSEEEE-CSSCST-TBCH--
T ss_pred HHHHHHHHhcCCceEEEecCCcEeehhhHHHHHHHH-hCCccccCCcCCHHHHHHhh--CCCeEEE-eeeecc-ceee--
Confidence 4566778899998752 2211122 223444443 3677777 477887776666 9999998 332221 1000
Q ss_pred HHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccC
Q 037779 180 HVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKS 258 (310)
Q Consensus 180 ~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~ 258 (310)
|.+..... +. ......++.+.+..++|| |++|||.+..|+.+++.+|||+|++|+.|..+
T Consensus 304 ---------r~~~~~g~-------~~-~~~l~~~~~~~~~~~vpV--ia~GGi~~~~di~kalalGA~~v~~g~~~~~~ 363 (486)
T 2cu0_A 304 ---------RIVAGVGV-------PQ-ITAVAMVADRAQEYGLYV--IADGGIRYSGDIVKAIAAGADAVMLGNLLAGT 363 (486)
T ss_dssp ---------HHHTCCCC-------CH-HHHHHHHHHHHHHHTCEE--EEESCCCSHHHHHHHHHTTCSEEEESTTTTTB
T ss_pred ---------eEEeecCc-------ch-HHHHHHHHHHHHHcCCcE--EecCCCCCHHHHHHHHHcCCCceeeChhhhcC
Confidence 00000000 00 011223333333346899 78999999999999999999999999999975
No 166
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=97.80 E-value=0.00033 Score=67.69 Aligned_cols=219 Identities=18% Similarity=0.203 Sum_probs=131.2
Q ss_pred ccccCCCHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhc--CcceEeeccccchHHHHHHHHcCC
Q 037779 38 VIMDVVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSV--TIPVMAKARIGHFVEAQILEAIGV 115 (310)
Q Consensus 38 ~i~~~~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~--~lPv~~kd~i~~~~~~~~~~~aGa 115 (310)
.+.++.+.+.++.+.+.|++.|. .|+ -+.+.|. .+++...++...+ +++++.-.++.+.+++..+.++ +
T Consensus 160 ~LvEvh~~eE~~~A~~lga~iIG-inn--r~L~t~~-----~dl~~~~~L~~~ip~~~~vIaEsGI~t~edv~~~~~~-a 230 (452)
T 1pii_A 160 VLTEVSNEEEQERAIALGAKVVG-INN--RDLRDLS-----IDLNRTRELAPKLGHNVTVISESGINTYAQVRELSHF-A 230 (452)
T ss_dssp EEEEECSHHHHHHHHHTTCSEEE-EES--EETTTTE-----ECTHHHHHHHHHHCTTSEEEEESCCCCHHHHHHHTTT-C
T ss_pred EEEEeCCHHHHHHHHHCCCCEEE-EeC--CCCCCCC-----CCHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHHh-C
Confidence 35677888999999999999873 331 1122221 2355666666554 6778887888777888889999 9
Q ss_pred Ceee-ecCCC---ChhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchH--HH------------
Q 037779 116 DYVD-ESEVL---TPADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIV--EA------------ 177 (310)
Q Consensus 116 d~v~-~~~~~---~~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~--~~------------ 177 (310)
|.++ ++..+ .+....+.+.. +..=+|++++++++..+.++|+|++++.-...++..+ +.
T Consensus 231 ~avLVGealmr~~d~~~~~~~l~~---~~~KICGit~~eda~~a~~~Gad~iGfIf~~~SpR~V~~~~a~~i~~~~~v~~ 307 (452)
T 1pii_A 231 NGFLIGSALMAHDDLHAAVRRVLL---GENKVCGLTRGQDAKAAYDAGAIYGGLIFVATSPRCVNVEQAQEVMAAAPLQY 307 (452)
T ss_dssp SEEEECHHHHTCSCHHHHHHHHHH---CSCEECCCCSHHHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHCCCEE
T ss_pred CEEEEcHHHcCCcCHHHHHHHHHH---HhccccCCCcHHHHHHHHhcCCCEEEeecCCCCCCCCCHHHHHHHHhcCCCCE
Confidence 9998 33222 34444443332 3456789999999999999999999864111222111 11
Q ss_pred ------------HHHHHHhhcceecccc-----------------------------cC------chhH-Hhh---hccC
Q 037779 178 ------------VRHVRSVMGDIRVLRN-----------------------------MD------DDEV-FTF---AKNI 206 (310)
Q Consensus 178 ------------~~~~~~~~~~~~~l~~-----------------------------~~------~d~~-~~~---~~~~ 206 (310)
.+.++++.-+...+.. +. .|.. +|. ..+.
T Consensus 308 VgVFvn~~~~~i~~~~~~~~ld~vQLHG~E~~~~~~~l~~~~p~~~~iika~~v~~~~~~~~~~~~d~~LlD~~~GGtG~ 387 (452)
T 1pii_A 308 VGVFRNHDIADVVDKAKVLSLAAVQLHGNEEQLYIDTLREALPAHVAIWKALSVGETLPAREFQHVDKYVLDNGQGGSGQ 387 (452)
T ss_dssp EEEESSCCHHHHHHHHHHHTCSEEEECSCCCHHHHHHHHHHSCTTSEEEEEEECSSSCCCCCCTTCCEEEEESCSCCSSC
T ss_pred EEEEeCCCHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHhhccCCCcEEEEEecCCccchhhhhcccEEEecCCCCCCCC
Confidence 1111111111000100 00 0000 110 0111
Q ss_pred CCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCC---CHHHHHHHHHHHHHcC
Q 037779 207 AAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSG---DPVRRARAIVQAVTNY 275 (310)
Q Consensus 207 ~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~---dp~~~~~~~~~~~~~~ 275 (310)
.-+|.+++ .....|+ +.+||+ +|+|+.++++.|+.||=|.|.+=.++ | ...+++|.+.++.|
T Consensus 388 ~fdW~~l~---~~~~~p~--iLAGGL-~p~NV~~ai~~~p~gvDvsSGVE~~pG~KD-~~ki~~f~~~~r~~ 452 (452)
T 1pii_A 388 RFDWSLLN---GQSLGNV--LLAGGL-GADNCVEAAQTGCAGLDFNSAVESQPGIKD-ARLLASVFQTLRAY 452 (452)
T ss_dssp CCCGGGGT---TSCCTTE--EEESSC-CTTTHHHHHTTCCSEEEECGGGEEETTEEC-HHHHHHHHHHHHCC
T ss_pred ccCHHHhh---cccCCcE--EEEcCC-CHHHHHHHHhcCCCEEEeCCceeCCCCCCC-HHHHHHHHHHHhhC
Confidence 22455432 2235688 458999 69999888889999999999997542 4 45678888887754
No 167
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=97.76 E-value=0.00021 Score=62.45 Aligned_cols=60 Identities=25% Similarity=0.388 Sum_probs=47.8
Q ss_pred HHHHHhc-CCCCEEEEccCCCCCHH--HHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHcCC
Q 037779 213 VMQTKQL-GRLPVVHFAAGGVATPA--DAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTNYS 276 (310)
Q Consensus 213 ~~~i~~~-~~iPVv~ia~GGI~t~~--di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~~~ 276 (310)
++.+++. .+ .+ +..+||+ ++ +..++++.|+|-++||+.|++++||.+.++++++.++.+-
T Consensus 142 ~~~ir~~~~~-f~--~v~pGI~-~~g~~~~~a~~~Gad~iVvGr~I~~a~dp~~a~~~i~~~i~~~~ 204 (215)
T 3ve9_A 142 ISRVKGDFPD-KL--VISPGVG-TQGAKPGIALCHGADYEIVGRSVYQSADPVRKLEEIVRSQEEVL 204 (215)
T ss_dssp HHHHHHHCTT-SE--EEECCTT-STTCCTTHHHHTTCSEEEECHHHHTSSSHHHHHHHHHHHHHHHC
T ss_pred HHHHHHhCCC-cE--EEcCCCC-cCcCCHHHHHHcCCCEEEeCHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 3445543 33 33 3479996 66 7888999999999999999999999999999999987643
No 168
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=97.73 E-value=0.00076 Score=61.75 Aligned_cols=46 Identities=22% Similarity=0.366 Sum_probs=40.3
Q ss_pred ccCCCCCHH-----------HHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHc
Q 037779 228 AAGGVATPA-----------DAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTN 274 (310)
Q Consensus 228 a~GGI~t~~-----------di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~ 274 (310)
+.+||. ++ ++.+++++|+|.+++||+|++++||.+.++++++.++.
T Consensus 196 VTPGIr-~qG~~~~DQ~Rv~t~~~a~~aGAd~iVvGr~I~~a~dp~~a~~~i~~~i~~ 252 (303)
T 3ru6_A 196 LTPGIR-PFGETNDDQKRVANLAMARENLSDYIVVGRPIYKNENPRAVCEKILNKIHR 252 (303)
T ss_dssp EECCCC-TTC--------CCSHHHHHHTTCSEEEECHHHHTSSCHHHHHHHHHHHHC-
T ss_pred ECCCcC-cccCCcccccccCCHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHHHHh
Confidence 469996 44 57788899999999999999999999999999998876
No 169
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=97.71 E-value=0.001 Score=58.35 Aligned_cols=46 Identities=17% Similarity=0.419 Sum_probs=40.5
Q ss_pred ccCCCCCHH--HHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHc
Q 037779 228 AAGGVATPA--DAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTN 274 (310)
Q Consensus 228 a~GGI~t~~--di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~ 274 (310)
...||+ ++ +..++++.|+|.++||+.|++++||.+.++++++.++.
T Consensus 162 vtPGI~-~~g~tp~~a~~~Gad~iVVGR~I~~A~dP~~aa~~i~~~i~~ 209 (222)
T 4dbe_A 162 VSPGMG-SQGGSYGDAVCAGADYEIIGRSIYNAGNPLTALRTINKIIED 209 (222)
T ss_dssp EECCBS-TTSBCTTHHHHHTCSEEEECHHHHTSSSHHHHHHHHHHHHHH
T ss_pred EcCCcc-cCccCHHHHHHcCCCEEEECHHhcCCCCHHHHHHHHHHHHHH
Confidence 469996 55 67788899999999999999999999999999998874
No 170
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=97.70 E-value=0.00022 Score=62.19 Aligned_cols=54 Identities=11% Similarity=0.123 Sum_probs=38.4
Q ss_pred HHHHhcCCCCEEEEccCCCCCHHH----------HHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHH
Q 037779 214 MQTKQLGRLPVVHFAAGGVATPAD----------AAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAV 272 (310)
Q Consensus 214 ~~i~~~~~iPVv~ia~GGI~t~~d----------i~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~ 272 (310)
+.+++....|++ .+||+ ++. ..+ +++|+|.++||+.|++++||.+.++++++.+
T Consensus 149 ~~ir~~~~~~~v---~pGI~-~~~~~~dq~rv~t~~~-i~aGad~iVvGR~I~~a~dP~~aa~~i~~~i 212 (213)
T 1vqt_A 149 KALREKIKGKIL---VPGIR-MEVKADDQKDVVTLEE-MKGIANFAVLGREIYLSENPREKIKRIKEMR 212 (213)
T ss_dssp HHHTTTCCSCEE---ECCBC----------CCBCHHH-HTTTCSEEEESHHHHTSSCHHHHHHHHTC--
T ss_pred HHHHHHCCCCEE---ECCCC-CCCCccchhhcCCHHH-HHCCCCEEEEChhhcCCCCHHHHHHHHHHHh
Confidence 344444333543 48995 544 578 8999999999999999999999999887654
No 171
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=97.69 E-value=0.0048 Score=54.88 Aligned_cols=167 Identities=19% Similarity=0.202 Sum_probs=98.6
Q ss_pred CCHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeec------cccc-------hHHHHH
Q 037779 43 VTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKA------RIGH-------FVEAQI 109 (310)
Q Consensus 43 ~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd------~i~~-------~~~~~~ 109 (310)
.+++-+..+.++||+.| -|. ... .-+|- -++...++.+++.+++||.+.. |.-+ .++++.
T Consensus 9 ~s~~~a~~A~~~GAdRI-ELc---~~L-~~GGl--TPS~g~i~~~~~~~~ipv~vMIRPR~GdF~Ys~~E~~~M~~Di~~ 81 (256)
T 1twd_A 9 YSMECALTAQQNGADRV-ELC---AAP-KEGGL--TPSLGVLKSVRQRVTIPVHPIIRPRGGDFCYSDGEFAAILEDVRT 81 (256)
T ss_dssp SSHHHHHHHHHTTCSEE-EEC---BCG-GGTCB--CCCHHHHHHHHHHCCSCEEEBCCSSSSCSCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCEE-EEc---CCc-ccCCC--CCCHHHHHHHHHHcCCceEEEECCCCCCCcCCHHHHHHHHHHHHH
Confidence 45788999999999998 452 112 23343 4668899999999999987742 3211 135566
Q ss_pred HHHcCCCeeee---c-CC-CChhHHHHHHHhcCCCCcEEe-----ecCCHHHHH-HHHHhCCCEEEEecCCCCCchHHHH
Q 037779 110 LEAIGVDYVDE---S-EV-LTPADEENHINKHNFRVPFVC-----GCRNLGESL-RRIREGAAMIRTKGEAGTGNIVEAV 178 (310)
Q Consensus 110 ~~~aGad~v~~---~-~~-~~~~~~~~~~~~~~~~l~v~~-----~v~t~~ea~-~a~~~Gad~I~v~g~~~~~~~~~~~ 178 (310)
+.++|+|.+.. + +. +..+...+.+...+ ++++.. .+.++.++. ...++|.+-|-+.|...+
T Consensus 82 ~~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~-~~~vTFHRAfD~~~d~~~ale~L~~lG~~rILTSG~~~~------- 153 (256)
T 1twd_A 82 VRELGFPGLVTGVLDVDGNVDMPRMEKIMAAAG-PLAVTFHRAFDMCANPLYTLNNLAELGIARVLTSGQKSD------- 153 (256)
T ss_dssp HHHTTCSEEEECCBCTTSSBCHHHHHHHHHHHT-TSEEEECGGGGGCSCHHHHHHHHHHHTCCEEEECTTSSS-------
T ss_pred HHHcCCCEEEEeeECCCCCcCHHHHHHHHHHhC-CCcEEEECchhccCCHHHHHHHHHHcCCCEEECCCCCCC-------
Confidence 77799999872 1 11 22333333333211 233322 134555443 344667765555432110
Q ss_pred HHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEcc
Q 037779 179 RHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGS 253 (310)
Q Consensus 179 ~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGs 253 (310)
.....+.++.+.+... .+.+++.||| +++++.+++++|+..+=.++
T Consensus 154 ---------------------------a~~g~~~L~~Lv~~a~-~i~Im~GgGv-~~~Ni~~l~~tGv~e~H~Sa 199 (256)
T 1twd_A 154 ---------------------------ALQGLSKIMELIAHRD-APIIMAGAGV-RAENLHHFLDAGVLEVHSSA 199 (256)
T ss_dssp ---------------------------TTTTHHHHHHHHTSSS-CCEEEEESSC-CTTTHHHHHHHTCSEEEECC
T ss_pred ---------------------------HHHHHHHHHHHHHhhC-CcEEEecCCc-CHHHHHHHHHcCCCeEeECC
Confidence 1113445555544333 3334789999 59999999988998887654
No 172
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=97.65 E-value=0.0003 Score=62.24 Aligned_cols=32 Identities=31% Similarity=0.354 Sum_probs=26.5
Q ss_pred CCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEcc
Q 037779 220 GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGS 253 (310)
Q Consensus 220 ~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGs 253 (310)
.+++| -++|||.|.+++.+++++||+.+-..+
T Consensus 199 ~~v~V--KasGGIrt~~da~~~i~aGA~riGtS~ 230 (239)
T 3ngj_A 199 DKALV--KAAGGIRTFDDAMKMINNGASRIGASA 230 (239)
T ss_dssp GGSEE--EEESSCCSHHHHHHHHHTTEEEEEESC
T ss_pred CCceE--EEeCCCCCHHHHHHHHHhcccceeccc
Confidence 35788 579999999999999999999655544
No 173
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=97.64 E-value=0.00012 Score=64.71 Aligned_cols=50 Identities=26% Similarity=0.371 Sum_probs=43.3
Q ss_pred cHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCC
Q 037779 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGD 260 (310)
Q Consensus 209 ~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~d 260 (310)
..++++.+++..++|+ ++.|||.+++++.++++.|||+|++|+.++..++
T Consensus 63 ~~~~i~~i~~~~~iPv--i~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~~p~ 112 (252)
T 1ka9_F 63 LLDVVARVAERVFIPL--TVGGGVRSLEDARKLLLSGADKVSVNSAAVRRPE 112 (252)
T ss_dssp HHHHHHHHHTTCCSCE--EEESSCCSHHHHHHHHHHTCSEEEECHHHHHCTH
T ss_pred cHHHHHHHHHhCCCCE--EEECCcCCHHHHHHHHHcCCCEEEEChHHHhCcH
Confidence 3567778887778999 5689999999999999999999999999998553
No 174
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=97.61 E-value=0.00025 Score=63.30 Aligned_cols=48 Identities=19% Similarity=0.261 Sum_probs=41.2
Q ss_pred CcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEcccccc
Q 037779 208 APYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 208 ~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~ 257 (310)
...+.++.+++..++|+ ++.|||++++++.++++.|||+|++|+.++.
T Consensus 61 ~~~~~i~~i~~~~~iPv--i~~ggi~~~~~i~~~~~~Gad~v~lg~~~~~ 108 (266)
T 2w6r_A 61 YDTEMIRFVRPLTTLPI--IASGGAGKMEHFLEAFLAGADKALAASVFHF 108 (266)
T ss_dssp CCHHHHHHHGGGCCSCE--EEESCCCSTHHHHHHHHHTCSEEECCCCC--
T ss_pred ccHHHHHHHHHhcCCCE--EEECCCCCHHHHHHHHHcCCcHhhhhHHHHh
Confidence 35778888888778999 5689999999999999999999999999993
No 175
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=97.58 E-value=0.00044 Score=60.60 Aligned_cols=36 Identities=33% Similarity=0.506 Sum_probs=29.4
Q ss_pred CCCCEEEEccCCCCCHHHHHHHHHcCCC--EEEEcccccc
Q 037779 220 GRLPVVHFAAGGVATPADAAMMMQLGCD--GVFVGSGVFK 257 (310)
Q Consensus 220 ~~iPVv~ia~GGI~t~~di~~~~~~Gad--gV~VGsai~~ 257 (310)
.++|| -++|||.|.+++.+++++|++ |+..|..|++
T Consensus 175 ~~v~V--kaaGGirt~~~al~~i~aGa~RiG~S~g~~I~~ 212 (220)
T 1ub3_A 175 GRAQV--KAAGGIRDRETALRMLKAGASRLGTSSGVALVA 212 (220)
T ss_dssp TSSEE--EEESSCCSHHHHHHHHHTTCSEEEETTHHHHHC
T ss_pred CCCeE--EEECCCCCHHHHHHHHHCCCcccchhHHHHHHH
Confidence 46888 468999999999999999999 6666666554
No 176
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=97.57 E-value=0.00073 Score=60.47 Aligned_cols=32 Identities=34% Similarity=0.445 Sum_probs=26.0
Q ss_pred CCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEcc
Q 037779 220 GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGS 253 (310)
Q Consensus 220 ~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGs 253 (310)
.+++| -++|||.|.+++.+++++||+-+...+
T Consensus 215 ~~v~V--KaAGGIrt~~~al~mi~aGA~RiGtS~ 246 (260)
T 3r12_A 215 DEMGV--KASGGIRTFEDAVKMIMYGADRIGTSS 246 (260)
T ss_dssp TTSEE--EEESSCCSHHHHHHHHHTTCSEEEESC
T ss_pred CCceE--EEeCCCCCHHHHHHHHHcCCceeecch
Confidence 46788 569999999999999999999544433
No 177
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=97.57 E-value=0.00022 Score=63.17 Aligned_cols=50 Identities=18% Similarity=0.293 Sum_probs=43.1
Q ss_pred cHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCC
Q 037779 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGD 260 (310)
Q Consensus 209 ~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~d 260 (310)
..+.++.+++..++|+ ++.|||.+++++.+++++|||+|++|+..+..++
T Consensus 62 ~~~~i~~i~~~~~ipv--i~~ggI~~~~~~~~~~~~Gad~V~lg~~~l~~p~ 111 (253)
T 1thf_D 62 MLELVEKVAEQIDIPF--TVGGGIHDFETASELILRGADKVSINTAAVENPS 111 (253)
T ss_dssp HHHHHHHHHTTCCSCE--EEESSCCSHHHHHHHHHTTCSEEEESHHHHHCTH
T ss_pred cHHHHHHHHHhCCCCE--EEeCCCCCHHHHHHHHHcCCCEEEEChHHHhChH
Confidence 4567777877778999 5689999999999999999999999999998543
No 178
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=97.55 E-value=0.0014 Score=58.72 Aligned_cols=49 Identities=22% Similarity=0.335 Sum_probs=42.0
Q ss_pred ccCCCCCHH-----------HHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHcCCC
Q 037779 228 AAGGVATPA-----------DAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTNYSD 277 (310)
Q Consensus 228 a~GGI~t~~-----------di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~~~~ 277 (310)
...||. +. +..++.++|+|.+++||+|++++||.+.++++++.+++|..
T Consensus 182 vtPGIr-~~g~~~gDQ~Rv~T~~~a~~aGad~iVvGr~I~~a~dp~~a~~~i~~~~~~~~~ 241 (259)
T 3tfx_A 182 VTPGIR-PAGNAKDDQSRVATPKMAKEWGSSAIVVGRPITLASDPKAAYEAIKKEFNAENL 241 (259)
T ss_dssp EECCCC-CC-----------CHHHHHHTTCSEEEECHHHHTSSSHHHHHHHHHHHHTCTTC
T ss_pred EcCCcC-CCCCCcCCccccCCHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 368886 43 27788999999999999999999999999999999887653
No 179
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=97.48 E-value=0.00015 Score=64.04 Aligned_cols=52 Identities=15% Similarity=0.134 Sum_probs=44.0
Q ss_pred CcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHH
Q 037779 208 APYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPV 262 (310)
Q Consensus 208 ~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~ 262 (310)
..++.++.++ ..++|+ ++.|||.+++++.++++.|||+|++|+.++..++..
T Consensus 61 ~~~~~i~~i~-~~~ipv--i~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~~p~~~ 112 (241)
T 1qo2_A 61 ENLPVLEKLS-EFAEHI--QIGGGIRSLDYAEKLRKLGYRRQIVSSKVLEDPSFL 112 (241)
T ss_dssp TTHHHHHHGG-GGGGGE--EEESSCCSHHHHHHHHHTTCCEEEECHHHHHCTTHH
T ss_pred hhHHHHHHHH-hcCCcE--EEECCCCCHHHHHHHHHCCCCEEEECchHhhChHHH
Confidence 3567777777 567899 568999999999999999999999999999876543
No 180
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=97.47 E-value=0.00035 Score=61.59 Aligned_cols=32 Identities=34% Similarity=0.475 Sum_probs=25.9
Q ss_pred CCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEcc
Q 037779 220 GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGS 253 (310)
Q Consensus 220 ~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGs 253 (310)
.+++| -++|||.|.+++.+++++||+-+-..+
T Consensus 189 ~~v~V--KaaGGIrt~~~a~~~i~aGa~RiGtS~ 220 (231)
T 3ndo_A 189 ERLGV--KASGGIRTAEQAAAMLDAGATRLGLSG 220 (231)
T ss_dssp TTSEE--EEESSCCSHHHHHHHHHTTCSEEEESS
T ss_pred CCceE--EEeCCCCCHHHHHHHHHhcchhcccch
Confidence 46788 568999999999999999999544433
No 181
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=97.47 E-value=0.0004 Score=75.25 Aligned_cols=119 Identities=16% Similarity=0.153 Sum_probs=73.9
Q ss_pred cCCCeee---ecCCCChh---HHHHHHHhcCCCCcEEee----cCCHHHHHHHHHhCCCEEEEecCCCCCc--hHHHHHH
Q 037779 113 IGVDYVD---ESEVLTPA---DEENHINKHNFRVPFVCG----CRNLGESLRRIREGAAMIRTKGEAGTGN--IVEAVRH 180 (310)
Q Consensus 113 aGad~v~---~~~~~~~~---~~~~~~~~~~~~l~v~~~----v~t~~ea~~a~~~Gad~I~v~g~~~~~~--~~~~~~~ 180 (310)
.|.+.+. .++..+++ ++++.++...++.++++. +....++..+.++|+|+|.+.|..+++. .....
T Consensus 996 ~Gv~lisP~~~~d~~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~kAGAD~IvVsG~eGGTgasp~~~~-- 1073 (1520)
T 1ofd_A 996 PGVTLISPPPHHDIYSIEDLAQLIYDLHQINPEAQVSVKLVAEIGIGTIAAGVAKANADIIQISGHDGGTGASPLSSI-- 1073 (1520)
T ss_dssp TTCCEECCSSCTTCSSHHHHHHHHHHHHHHCTTSEEEEEEECSTTHHHHHHHHHHTTCSEEEEECTTCCCSSEEHHHH--
T ss_pred CCCCeeCCCCCcCcCCHHHHHHHHHHHHHhCCCCCEEEEecCCCChHHHHHHHHHcCCCEEEEeCCCCccCCCcchhh--
Confidence 4556553 11233444 344555554445665554 2346688888999999999987643221 10000
Q ss_pred HHHhhcceecccccCchhHHhhhccCCC-cHHHHHHHHhc-------CCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEc
Q 037779 181 VRSVMGDIRVLRNMDDDEVFTFAKNIAA-PYDLVMQTKQL-------GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVG 252 (310)
Q Consensus 181 ~~~~~~~~~~l~~~~~d~~~~~~~~~~~-~~~l~~~i~~~-------~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VG 252 (310)
.+.+. ....+..+.+. .++|| |++|||.+..|+.+++.+||++|.+|
T Consensus 1074 -----------------------~~~GlPt~~aL~ev~~al~~~glr~~IpV--IAdGGIrtG~DVakALaLGAdaV~iG 1128 (1520)
T 1ofd_A 1074 -----------------------KHAGSPWELGVTEVHRVLMENQLRDRVLL--RADGGLKTGWDVVMAALMGAEEYGFG 1128 (1520)
T ss_dssp -----------------------HHBCCCHHHHHHHHHHHHHHTTCGGGCEE--EEESSCCSHHHHHHHHHTTCSEEECS
T ss_pred -----------------------cCCchhHHHHHHHHHHHHHhcCCCCCceE--EEECCCCCHHHHHHHHHcCCCeeEEc
Confidence 00111 23344444332 25888 77999999999999999999999999
Q ss_pred cccccC
Q 037779 253 SGVFKS 258 (310)
Q Consensus 253 sai~~~ 258 (310)
++++.+
T Consensus 1129 TafL~a 1134 (1520)
T 1ofd_A 1129 SIAMIA 1134 (1520)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998664
No 182
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=97.45 E-value=0.0011 Score=60.54 Aligned_cols=60 Identities=17% Similarity=0.280 Sum_probs=45.7
Q ss_pred HHHHhcCCCCEEEEccCCCC-CHHH----HHHHHH-cCCCEEEEcccccc--CCCHHHHHHHHHHHHHc
Q 037779 214 MQTKQLGRLPVVHFAAGGVA-TPAD----AAMMMQ-LGCDGVFVGSGVFK--SGDPVRRARAIVQAVTN 274 (310)
Q Consensus 214 ~~i~~~~~iPVv~ia~GGI~-t~~d----i~~~~~-~GadgV~VGsai~~--~~dp~~~~~~~~~~~~~ 274 (310)
+.+.+.+.+||+ ++.|+-. +.++ ++.+++ .|+.|+++|+.+++ .+||.++++++...++.
T Consensus 230 ~~Vv~a~~vPVV-iaGG~k~~~~~e~L~~v~~A~~~aGa~Gv~vGRNIfQ~~~~dp~~~v~al~~iVH~ 297 (307)
T 3fok_A 230 ERVMESTTMPTL-LLGGEGGNDPDATFASWEHALTLPGVRGLTVGRTLLYPQDGDVAAAVDTAARLVHT 297 (307)
T ss_dssp HHHGGGCSSCEE-EECCSCC--CHHHHHHHHHHTTSTTEEEEEECTTTSSCSSSCHHHHHHHHHHHHCC
T ss_pred HHHHHhCCCCEE-EeCCCCCCCHHHHHHHHHHHHHhCCCeEEeechhhccCCCCCHHHHHHHHHHHHHh
Confidence 455566679997 4555542 3333 456667 69999999999999 99999999999998873
No 183
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=97.45 E-value=7.6e-05 Score=69.93 Aligned_cols=76 Identities=16% Similarity=0.114 Sum_probs=53.3
Q ss_pred HHHHHHHHhc-CCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEcccc-ccCCCHHHHHHHHHHHHHcCCChhhHHhhhhc
Q 037779 210 YDLVMQTKQL-GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGV-FKSGDPVRRARAIVQAVTNYSDPDVLAEVSCG 287 (310)
Q Consensus 210 ~~l~~~i~~~-~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai-~~~~dp~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (310)
.+++..+.+. .++|| |..|||.|++|+.+.+.+||+.|+|||++ ++.+.. ++++.+.+..+.....+..+++.
T Consensus 265 ~~~v~~~~~~~~~~pI--Ig~GGI~s~~Da~e~i~aGAs~Vqv~Ta~~y~GP~~---~~~I~~~L~~~L~~~G~~si~e~ 339 (354)
T 3tjx_A 265 LANINAFYRRCPGKLI--FGCGGVYTGEDAFLHVLAGASMVQVGTALQEEGPSI---FERLTSELLGVMAKKRYQTLDEF 339 (354)
T ss_dssp HHHHHHHHHHCTTSEE--EEESSCCSHHHHHHHHHHTEEEEEECHHHHHHCTTH---HHHHHHHHHHHHHHHTCCSGGGT
T ss_pred HHHHHHHHHhcCCCcE--EEeCCcCCHHHHHHHHHcCCCEEEEChhhhhcCchH---HHHHHHHHHHHHHHcCCCCHHHH
Confidence 3444455443 46788 67899999999999999999999999996 565554 34455555555555566666665
Q ss_pred cCC
Q 037779 288 LGE 290 (310)
Q Consensus 288 ~~~ 290 (310)
.|.
T Consensus 340 ~G~ 342 (354)
T 3tjx_A 340 RGK 342 (354)
T ss_dssp TTC
T ss_pred hCh
Confidence 554
No 184
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=97.44 E-value=0.0027 Score=55.50 Aligned_cols=176 Identities=16% Similarity=0.174 Sum_probs=97.0
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHH---hhcCcceEeec------cccc-------hHHHH
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIK---SSVTIPVMAKA------RIGH-------FVEAQ 108 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~---~~~~lPv~~kd------~i~~-------~~~~~ 108 (310)
++-+..+.++||+.| -|. ... .-+|- -++...++.++ +.+++||.+.. |.-+ .++++
T Consensus 11 ~~~a~~A~~~GAdRI-ELc---~~L-~~GGl--TPS~g~i~~~~~~~~~~~ipV~vMIRPR~GdF~Ys~~E~~~M~~Di~ 83 (224)
T 2bdq_A 11 LTDLTRLDKAIISRV-ELC---DNL-AVGGT--TPSYGVIKEANQYLHEKGISVAVMIRPRGGNFVYNDLELRIMEEDIL 83 (224)
T ss_dssp TTTGGGCCTTTCCEE-EEE---BCG-GGTCB--CCCHHHHHHHHHHHHHTTCEEEEECCSSSSCSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEE-EEc---CCc-ccCCc--CCCHHHHHHHHHhhhhcCCceEEEECCCCCCCcCCHHHHHHHHHHHH
Confidence 455777888999998 451 112 22343 45688899998 88899987642 3211 13556
Q ss_pred HHHHcCCCeeee---c-CC-CChhHHHHHHHhcCCCCcEEe----e-c--CCHHHHH-HHHHhCCCEEEEecCCCCCchH
Q 037779 109 ILEAIGVDYVDE---S-EV-LTPADEENHINKHNFRVPFVC----G-C--RNLGESL-RRIREGAAMIRTKGEAGTGNIV 175 (310)
Q Consensus 109 ~~~~aGad~v~~---~-~~-~~~~~~~~~~~~~~~~l~v~~----~-v--~t~~ea~-~a~~~Gad~I~v~g~~~~~~~~ 175 (310)
.+.++|+|.+.. + +. +..+...+.+...+ ++++.. + + .++.++. ...++|.+-|-++|-..+.+.
T Consensus 84 ~~~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~-~~~vTFHRAFD~~~~~d~~~ale~L~~lGv~rILTSG~~~~~~a- 161 (224)
T 2bdq_A 84 RAVELESDALVLGILTSNNHIDTEAIEQLLPATQ-GLPLVFHMAFDVIPKSDQKKSIDQLVALGFTRILLHGSSNGEPI- 161 (224)
T ss_dssp HHHHTTCSEEEECCBCTTSSBCHHHHHHHHHHHT-TCCEEECGGGGGSCTTTHHHHHHHHHHTTCCEEEECSCSSCCCG-
T ss_pred HHHHcCCCEEEEeeECCCCCcCHHHHHHHHHHhC-CCeEEEECchhccCCcCHHHHHHHHHHcCCCEEECCCCCCCCcH-
Confidence 677799999872 1 11 23333444443321 343332 1 3 4555544 345677776665543221100
Q ss_pred HHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHh-c-CCCCEEEEccCCCCCHHHHHHHH-HcCCCEEEEc
Q 037779 176 EAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQ-L-GRLPVVHFAAGGVATPADAAMMM-QLGCDGVFVG 252 (310)
Q Consensus 176 ~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~-~-~~iPVv~ia~GGI~t~~di~~~~-~~GadgV~VG 252 (310)
....+.++.+.+ . .++-| ++.||| +++++.++. ++|++.+=..
T Consensus 162 -------------------------------~~g~~~L~~Lv~~a~~ri~I--m~GgGV-~~~Ni~~l~~~tGv~e~H~s 207 (224)
T 2bdq_A 162 -------------------------------IENIKHIKALVEYANNRIEI--MVGGGV-TAENYQYICQETGVKQAHGT 207 (224)
T ss_dssp -------------------------------GGGHHHHHHHHHHHTTSSEE--EECSSC-CTTTHHHHHHHHTCCEEEET
T ss_pred -------------------------------HHHHHHHHHHHHhhCCCeEE--EeCCCC-CHHHHHHHHHhhCCCEEccc
Confidence 112334444433 2 24444 689999 599999998 5799999987
Q ss_pred cccccCCCHHH
Q 037779 253 SGVFKSGDPVR 263 (310)
Q Consensus 253 sai~~~~dp~~ 263 (310)
+.+.++.+|.+
T Consensus 208 ~i~~~~~~~~~ 218 (224)
T 2bdq_A 208 RITQMAGDPLE 218 (224)
T ss_dssp TCC--------
T ss_pred cccCCCCCcch
Confidence 77777778764
No 185
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=97.41 E-value=0.00041 Score=74.98 Aligned_cols=120 Identities=14% Similarity=0.125 Sum_probs=74.2
Q ss_pred cCCCeee---ecCCCChh---HHHHHHHhcCCCCcEEee----cCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHH
Q 037779 113 IGVDYVD---ESEVLTPA---DEENHINKHNFRVPFVCG----CRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVR 182 (310)
Q Consensus 113 aGad~v~---~~~~~~~~---~~~~~~~~~~~~l~v~~~----v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~ 182 (310)
.|.+.+. .++..++. ++++.++...++.++++. +....++..+.++|+|+|.+.|..+++...
T Consensus 961 ~Gv~lisP~~~~d~~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~~AGAD~IvVsG~eGGTgas------- 1033 (1479)
T 1ea0_A 961 PGVMLISPPPHHDIYSIEDLAQLIYDLKQINPDAKVTVKLVSRSGIGTIAAGVAKANADIILISGNSGGTGAS------- 1033 (1479)
T ss_dssp TTCCEECCSSCTTCSSHHHHHHHHHHHHHHCTTCEEEEEEECCTTHHHHHHHHHHTTCSEEEEECTTCCCSSE-------
T ss_pred CCCCccCCCCCcCcCCHHHHHHHHHHHHHhCCCCCEEEEEcCCCChHHHHHHHHHcCCcEEEEcCCCCCCCCC-------
Confidence 5666654 11333444 344555554445665553 234668888899999999998764322100
Q ss_pred HhhcceecccccCchhHHhhhccCCC-cHHHHHHHHhc-------CCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccc
Q 037779 183 SVMGDIRVLRNMDDDEVFTFAKNIAA-PYDLVMQTKQL-------GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSG 254 (310)
Q Consensus 183 ~~~~~~~~l~~~~~d~~~~~~~~~~~-~~~l~~~i~~~-------~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsa 254 (310)
.+... .+.+. ....+..+.+. .++|| |++|||.+..|+.+++.+||++|.+|++
T Consensus 1034 -------p~~~~---------~~~G~Pt~~aL~ev~~al~~~glr~~VpV--IAdGGIrtG~DVakALaLGAdaV~iGTa 1095 (1479)
T 1ea0_A 1034 -------PQTSI---------KFAGLPWEMGLSEVHQVLTLNRLRHRVRL--RTDGGLKTGRDIVIAAMLGAEEFGIGTA 1095 (1479)
T ss_dssp -------ETTHH---------HHSCCCHHHHHHHHHHHHHTTTCTTTSEE--EEESSCCSHHHHHHHHHTTCSEEECCHH
T ss_pred -------chhhh---------cCCchhHHHHHHHHHHHHHHcCCCCCceE--EEECCCCCHHHHHHHHHcCCCeeeEcHH
Confidence 00000 01112 23344444432 26888 7799999999999999999999999999
Q ss_pred ccc
Q 037779 255 VFK 257 (310)
Q Consensus 255 i~~ 257 (310)
++.
T Consensus 1096 fL~ 1098 (1479)
T 1ea0_A 1096 SLI 1098 (1479)
T ss_dssp HHH
T ss_pred HHH
Confidence 965
No 186
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=97.40 E-value=0.015 Score=53.15 Aligned_cols=177 Identities=13% Similarity=0.095 Sum_probs=102.5
Q ss_pred ccCCCHHHHHHHHHcCCcEEEecc-cccchhhhcC-CCCCCCC----hHHHHHHHhhcCcceEeeccc--cch----HHH
Q 037779 40 MDVVTPEQARIAEEAGACAVMALE-RVPADIRAQG-GVARMSD----PQLIKQIKSSVTIPVMAKARI--GHF----VEA 107 (310)
Q Consensus 40 ~~~~~~~~a~~~~~~Ga~~I~~l~-~~~~d~r~~~-G~~~~~~----~~~i~~i~~~~~lPv~~kd~i--~~~----~~~ 107 (310)
..+.|+-.|+.++++|+++|-.-- .+.. ..+ -+...-. ...++.|++.+++||++..-. +.. .-+
T Consensus 34 ~~ayD~~sA~l~e~aG~dai~vs~~s~a~---~~G~pD~~~vt~~em~~~~~~I~r~~~~pviaD~d~Gyg~~~~v~~~v 110 (305)
T 3ih1_A 34 PGAHDAMAALVARNTGFLALYLSGAAYTA---SKGLPDLGIVTSTEVAERARDLVRATDLPVLVDIDTGFGGVLNVARTA 110 (305)
T ss_dssp EBCSSHHHHHHHHHTTCSCEEECHHHHHH---HHTCCSSSCSCHHHHHHHHHHHHHHHCCCEEEECTTCSSSHHHHHHHH
T ss_pred ecCcCHHHHHHHHHcCCCEEEECcHHHHH---hCCCCCCCcCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCHHHHHHHH
Confidence 345677889999999999972210 0000 011 0111111 234567777789999885322 322 335
Q ss_pred HHHHHcCCCeeeecCC--------------CChhHHHHHHHh---cCCCCcEEeecCCH-----H----HHHHHHHhCCC
Q 037779 108 QILEAIGVDYVDESEV--------------LTPADEENHINK---HNFRVPFVCGCRNL-----G----ESLRRIREGAA 161 (310)
Q Consensus 108 ~~~~~aGad~v~~~~~--------------~~~~~~~~~~~~---~~~~l~v~~~v~t~-----~----ea~~a~~~Gad 161 (310)
..+.++||++|.+-+. .+..+....++. .+.+..+..-+... + .++...++|||
T Consensus 111 ~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A~~~~~I~ARtda~~~~g~~~ai~Ra~ay~eAGAD 190 (305)
T 3ih1_A 111 VEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEVAPSLYIVARTDARGVEGLDEAIERANAYVKAGAD 190 (305)
T ss_dssp HHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHHCTTSEEEEEECCHHHHCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHcCCCeEEEEeeccccccCHHHHHHHHHHHHHcCCC
Confidence 6677899999983222 223344444433 34445555554432 2 23334467888
Q ss_pred EEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEE-EccCCCCCHHHHHH
Q 037779 162 MIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVH-FAAGGVATPADAAM 240 (310)
Q Consensus 162 ~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~-ia~GGI~t~~di~~ 240 (310)
.|.+.+. .+.+.++.+.+..++|+++ +.++|-.-.-...+
T Consensus 191 ~i~~e~~---------------------------------------~~~~~~~~i~~~~~~P~~~n~~~~g~tp~~~~~e 231 (305)
T 3ih1_A 191 AIFPEAL---------------------------------------QSEEEFRLFNSKVNAPLLANMTEFGKTPYYSAEE 231 (305)
T ss_dssp EEEETTC---------------------------------------CSHHHHHHHHHHSCSCBEEECCTTSSSCCCCHHH
T ss_pred EEEEcCC---------------------------------------CCHHHHHHHHHHcCCCEEEeecCCCCCCCCCHHH
Confidence 8777521 1345566666666789853 24566422235788
Q ss_pred HHHcCCCEEEEccccccC
Q 037779 241 MMQLGCDGVFVGSGVFKS 258 (310)
Q Consensus 241 ~~~~GadgV~VGsai~~~ 258 (310)
+.++|+.-|..|..++++
T Consensus 232 L~~lGv~~v~~~~~~~ra 249 (305)
T 3ih1_A 232 FANMGFQMVIYPVTSLRV 249 (305)
T ss_dssp HHHTTCSEEEECSHHHHH
T ss_pred HHHcCCCEEEEchHHHHH
Confidence 899999999999988874
No 187
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=97.32 E-value=0.00075 Score=59.61 Aligned_cols=39 Identities=26% Similarity=0.333 Sum_probs=29.0
Q ss_pred HHhcCCCCEEEEccCCCCCHHHHHHHHHcCCC--EEEEccccc
Q 037779 216 TKQLGRLPVVHFAAGGVATPADAAMMMQLGCD--GVFVGSGVF 256 (310)
Q Consensus 216 i~~~~~iPVv~ia~GGI~t~~di~~~~~~Gad--gV~VGsai~ 256 (310)
+++...+|| -++|||.+.+++.+++++|++ |+..|..|+
T Consensus 187 m~~~v~v~V--KaaGGirt~~~al~~i~aGa~RiG~S~g~~I~ 227 (234)
T 1n7k_A 187 LAKPLGMGV--KASGGIRSGIDAVLAVGAGADIIGTSSAVKVL 227 (234)
T ss_dssp HHGGGTCEE--EEESSCCSHHHHHHHHHTTCSEEEETTHHHHH
T ss_pred HHHHHCCCE--EEecCCCCHHHHHHHHHcCccccchHHHHHHH
Confidence 344323788 468999999999999999999 555555444
No 188
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=97.27 E-value=0.0067 Score=55.09 Aligned_cols=174 Identities=18% Similarity=0.201 Sum_probs=103.2
Q ss_pred cCCCHHHHHHHHHcCCcEEEecccccchh--h-hcCCC--CCCCC----hHHHHHHHhhcCcceEeecc--ccch----H
Q 037779 41 DVVTPEQARIAEEAGACAVMALERVPADI--R-AQGGV--ARMSD----PQLIKQIKSSVTIPVMAKAR--IGHF----V 105 (310)
Q Consensus 41 ~~~~~~~a~~~~~~Ga~~I~~l~~~~~d~--r-~~~G~--~~~~~----~~~i~~i~~~~~lPv~~kd~--i~~~----~ 105 (310)
.+.|+-.|+.++++|++++-.- +- - ...|- ...-. ...++.|++.+++||++..- .+.. .
T Consensus 27 ~a~D~~sA~i~e~aGf~ai~vs-----~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~Gyg~~~~~~~ 101 (287)
T 3b8i_A 27 SVFDPMSARIAADLGFECGILG-----GSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPVIADADHGYGNALNVMR 101 (287)
T ss_dssp ECCSHHHHHHHHHTTCSCEEEC-----HHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTTCSSCEEEECTTCSSSHHHHHH
T ss_pred cCCCHHHHHHHHHcCCCEEEeC-----cHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCHHHHHH
Confidence 4567788999999999997221 11 0 00111 11111 23456777888999887422 2322 3
Q ss_pred HHHHHHHcCCCeeeecCCC-------------ChhHHHHHHHh---cC--CCCcEEeecCC----HH----HHHHHHHhC
Q 037779 106 EAQILEAIGVDYVDESEVL-------------TPADEENHINK---HN--FRVPFVCGCRN----LG----ESLRRIREG 159 (310)
Q Consensus 106 ~~~~~~~aGad~v~~~~~~-------------~~~~~~~~~~~---~~--~~l~v~~~v~t----~~----ea~~a~~~G 159 (310)
.+..+.++||.+|.+-+.. +..+....++. .+ .+..+..-+.. .+ .++...++|
T Consensus 102 ~v~~l~~aGa~gv~iED~~~pKrcgh~~gkl~~~~e~~~~I~aa~~a~~~~~~~i~aRtdaa~~gl~~ai~Ra~ay~eAG 181 (287)
T 3b8i_A 102 TVVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARVDPALTIIARTNAELIDVDAVIQRTLAYQEAG 181 (287)
T ss_dssp HHHHHHHHTCSEEEEECBCCSCCTTTCTTCBCCHHHHHHHHHHHHHHCCSTTSEEEEEEETTTSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhCCeEEEEcCCCCccccCCCCCCccCHHHHHHHHHHHHHcCCCCCcEEEEechhhhcCHHHHHHHHHHHHHcC
Confidence 4566777999999843322 22234444432 22 23444443221 12 233444678
Q ss_pred CCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHH
Q 037779 160 AAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAA 239 (310)
Q Consensus 160 ad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~ 239 (310)
||.|.+.+. .+.+.++.+.+..++|++ |.++|-...-+..
T Consensus 182 Ad~i~~e~~---------------------------------------~~~~~~~~i~~~~~~P~i-i~~~g~~~~~~~~ 221 (287)
T 3b8i_A 182 ADGICLVGV---------------------------------------RDFAHLEAIAEHLHIPLM-LVTYGNPQLRDDA 221 (287)
T ss_dssp CSEEEEECC---------------------------------------CSHHHHHHHHTTCCSCEE-EECTTCGGGCCHH
T ss_pred CCEEEecCC---------------------------------------CCHHHHHHHHHhCCCCEE-EeCCCCCCCCCHH
Confidence 888777521 134566777777789998 6777753334688
Q ss_pred HHHHcCCCEEEEccccccCC
Q 037779 240 MMMQLGCDGVFVGSGVFKSG 259 (310)
Q Consensus 240 ~~~~~GadgV~VGsai~~~~ 259 (310)
++.++|+.-|..|..++++-
T Consensus 222 eL~~lGv~~v~~~~~~~raa 241 (287)
T 3b8i_A 222 RLARLGVRVVVNGHAAYFAA 241 (287)
T ss_dssp HHHHTTEEEEECCCHHHHHH
T ss_pred HHHHcCCcEEEEChHHHHHH
Confidence 99999999999999888744
No 189
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=97.25 E-value=0.0063 Score=51.72 Aligned_cols=37 Identities=22% Similarity=0.160 Sum_probs=31.2
Q ss_pred HHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEcc
Q 037779 211 DLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGS 253 (310)
Q Consensus 211 ~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGs 253 (310)
+.++.+ .++|+ ||+|+|.+++++.+ +++||++|..|+
T Consensus 142 ~~I~~v---~~~Pi--IaGGlI~t~edv~~-l~aGA~aIsTs~ 178 (188)
T 1vkf_A 142 KVARKI---PGRTV--IAAGLVETEEEARE-ILKHVSAISTSS 178 (188)
T ss_dssp HHHTTS---TTSEE--EEESCCCSHHHHHH-HTTTSSEEEECC
T ss_pred HHHHHh---cCCCE--EEECCcCCHHHHHH-HHCCCeEEEeCC
Confidence 444444 46788 78999999999999 999999999987
No 190
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=97.22 E-value=0.0011 Score=62.83 Aligned_cols=52 Identities=19% Similarity=0.095 Sum_probs=44.5
Q ss_pred HHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcC-CCEEEEccccccCCCHHHHHH
Q 037779 211 DLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVFKSGDPVRRAR 266 (310)
Q Consensus 211 ~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~G-adgV~VGsai~~~~dp~~~~~ 266 (310)
+ ++.+++..++|| |+.||| +++++.++++.| ||.|++|++++..++....++
T Consensus 298 ~-~~~ir~~~~iPv--i~~G~i-t~~~a~~~l~~g~aD~V~igR~~l~~P~l~~k~~ 350 (379)
T 3aty_A 298 V-VAWVRGSYSGVK--ISNLRY-DFEEADQQIREGKVDAVAFGAKFIANPDLVERAQ 350 (379)
T ss_dssp H-HHHHHTTCCSCE--EEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHH
T ss_pred H-HHHHHHHCCCcE--EEECCC-CHHHHHHHHHcCCCeEEEecHHHHhCcHHHHHHH
Confidence 5 778888778999 668999 899999999987 999999999999887665543
No 191
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=97.21 E-value=0.0028 Score=55.25 Aligned_cols=113 Identities=23% Similarity=0.244 Sum_probs=77.9
Q ss_pred cceEeeccccch-HHHHHHHHcCCCeeeec-CCCChhHHHHHHHhcCCCCcEEee-cCCHHHHHHHHHhCCCEEEEecCC
Q 037779 93 IPVMAKARIGHF-VEAQILEAIGVDYVDES-EVLTPADEENHINKHNFRVPFVCG-CRNLGESLRRIREGAAMIRTKGEA 169 (310)
Q Consensus 93 lPv~~kd~i~~~-~~~~~~~~aGad~v~~~-~~~~~~~~~~~~~~~~~~l~v~~~-v~t~~ea~~a~~~Gad~I~v~g~~ 169 (310)
+||++.+...+. ..++.+.+.|++.+-++ ......+.++.++++.+++.+.++ +.|.++++.+.++|++++.. +.
T Consensus 16 i~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~AGA~fivs--P~ 93 (217)
T 3lab_A 16 IPVIVIDDLVHAIPMAKALVAGGVHLLEVTLRTEAGLAAISAIKKAVPEAIVGAGTVCTADDFQKAIDAGAQFIVS--PG 93 (217)
T ss_dssp EEEECCSCGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSEEEE--SS
T ss_pred EEEEEcCCHHHHHHHHHHHHHcCCCEEEEeCCCccHHHHHHHHHHHCCCCeEeeccccCHHHHHHHHHcCCCEEEe--CC
Confidence 566555444332 34578888999998644 222355677777776567777775 78999999999999999865 21
Q ss_pred CCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCC------CEEEEccCCCCCHHHHHHHHH
Q 037779 170 GTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRL------PVVHFAAGGVATPADAAMMMQ 243 (310)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~i------PVv~ia~GGI~t~~di~~~~~ 243 (310)
. +.++++..++. .+ |+ + =|+.|++++.++++
T Consensus 94 ~--------------------------------------~~evi~~~~~~-~v~~~~~~~~--~--PG~~TptE~~~A~~ 130 (217)
T 3lab_A 94 L--------------------------------------TPELIEKAKQV-KLDGQWQGVF--L--PGVATASEVMIAAQ 130 (217)
T ss_dssp C--------------------------------------CHHHHHHHHHH-HHHCSCCCEE--E--EEECSHHHHHHHHH
T ss_pred C--------------------------------------cHHHHHHHHHc-CCCccCCCeE--e--CCCCCHHHHHHHHH
Confidence 1 22333433332 35 77 4 47789999999999
Q ss_pred cCCCEEE
Q 037779 244 LGCDGVF 250 (310)
Q Consensus 244 ~GadgV~ 250 (310)
+|+|.|=
T Consensus 131 ~Gad~vK 137 (217)
T 3lab_A 131 AGITQLK 137 (217)
T ss_dssp TTCCEEE
T ss_pred cCCCEEE
Confidence 9999994
No 192
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=97.21 E-value=0.018 Score=50.32 Aligned_cols=126 Identities=17% Similarity=0.231 Sum_probs=82.9
Q ss_pred hHHHHHHHhhcCcceEeeccccc-hHHHHHHHHcCCCeeeec-CCCChhHHHHHHHhcCCCCcEEee-cCCHHHHHHHHH
Q 037779 81 PQLIKQIKSSVTIPVMAKARIGH-FVEAQILEAIGVDYVDES-EVLTPADEENHINKHNFRVPFVCG-CRNLGESLRRIR 157 (310)
Q Consensus 81 ~~~i~~i~~~~~lPv~~kd~i~~-~~~~~~~~~aGad~v~~~-~~~~~~~~~~~~~~~~~~l~v~~~-v~t~~ea~~a~~ 157 (310)
.+.+..+++.-=+||++...... .+.++.+.+.|++.+-.. ......+.++.+.+..+++.+.++ +.+.+++..+.+
T Consensus 8 ~~~~~~l~~~~ii~vir~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~l~vgaGtvl~~d~~~~A~~ 87 (224)
T 1vhc_A 8 QQIIEKLRELKIVPVIALDNADDILPLADTLAKNGLSVAEITFRSEAAADAIRLLRANRPDFLIAAGTVLTAEQVVLAKS 87 (224)
T ss_dssp HHHHHHHHHHCEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEESCCSHHHHHHHHH
T ss_pred HHHHHHHHHCCeEEEEeCCCHHHHHHHHHHHHHcCCCEEEEeccCchHHHHHHHHHHhCcCcEEeeCcEeeHHHHHHHHH
Confidence 34555565554477776644432 245678888999998643 222344566656555456777665 457889999999
Q ss_pred hCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHH
Q 037779 158 EGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPAD 237 (310)
Q Consensus 158 ~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~d 237 (310)
.|||++... . . +.+.++..++ ...|++ + |+.|+++
T Consensus 88 aGAd~v~~p-~-~--------------------------------------d~~v~~~ar~-~g~~~i-~---Gv~t~~e 122 (224)
T 1vhc_A 88 SGADFVVTP-G-L--------------------------------------NPKIVKLCQD-LNFPIT-P---GVNNPMA 122 (224)
T ss_dssp HTCSEEECS-S-C--------------------------------------CHHHHHHHHH-TTCCEE-C---EECSHHH
T ss_pred CCCCEEEEC-C-C--------------------------------------CHHHHHHHHH-hCCCEE-e---ccCCHHH
Confidence 999998431 1 0 2233344444 456774 2 4999999
Q ss_pred HHHHHHcCCCEEEE
Q 037779 238 AAMMMQLGCDGVFV 251 (310)
Q Consensus 238 i~~~~~~GadgV~V 251 (310)
+.++.++|+|.|.+
T Consensus 123 ~~~A~~~Gad~vk~ 136 (224)
T 1vhc_A 123 IEIALEMGISAVKF 136 (224)
T ss_dssp HHHHHHTTCCEEEE
T ss_pred HHHHHHCCCCEEEE
Confidence 99999999999998
No 193
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=97.19 E-value=0.00067 Score=59.38 Aligned_cols=49 Identities=27% Similarity=0.447 Sum_probs=41.5
Q ss_pred HHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCC
Q 037779 210 YDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGD 260 (310)
Q Consensus 210 ~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~d 260 (310)
.+.++.+++..++|+ ++.|||.+++++.+++++|||+|.+|+.++..++
T Consensus 66 ~~~i~~i~~~~~ipv--i~~g~i~~~~~~~~~~~~Gad~V~i~~~~~~~~~ 114 (253)
T 1h5y_A 66 IDSVKRVAEAVSIPV--LVGGGVRSLEDATTLFRAGADKVSVNTAAVRNPQ 114 (253)
T ss_dssp HHHHHHHHHHCSSCE--EEESSCCSHHHHHHHHHHTCSEEEESHHHHHCTH
T ss_pred HHHHHHHHHhcCCCE--EEECCCCCHHHHHHHHHcCCCEEEEChHHhhCcH
Confidence 556777777678999 5689999999999999999999999999886443
No 194
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=97.16 E-value=0.0025 Score=56.41 Aligned_cols=45 Identities=22% Similarity=0.388 Sum_probs=36.3
Q ss_pred ccCCCCCHHH-----------HHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHH
Q 037779 228 AAGGVATPAD-----------AAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVT 273 (310)
Q Consensus 228 a~GGI~t~~d-----------i~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~ 273 (310)
...||. ++. ..+++++|+|.+++||+|++++||.+.++++++.++
T Consensus 182 vtPGIr-~~g~~~~dQ~rv~t~~~~~~aGad~lVvGr~I~~a~dp~~a~~~i~~~i~ 237 (239)
T 3tr2_A 182 VTPGIR-LETDEKGDQKRVMTPRAAIQAGSDYLVIGRPITQSTDPLKALEAIDKDIK 237 (239)
T ss_dssp EECCBC-----------CCBCHHHHHHHTCSEEEECHHHHTSSSHHHHHHHHHHHC-
T ss_pred ECCCcC-CCCCCcCcccccCCHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHHHh
Confidence 368886 432 567889999999999999999999999999988764
No 195
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=97.16 E-value=0.043 Score=49.93 Aligned_cols=174 Identities=14% Similarity=0.187 Sum_probs=100.4
Q ss_pred cCCCHHHHHHHHHcCCcEEEecccccchh--hh-cCCC--CCCCC----hHHHHHHHhhcCcceEeecc--cc-c----h
Q 037779 41 DVVTPEQARIAEEAGACAVMALERVPADI--RA-QGGV--ARMSD----PQLIKQIKSSVTIPVMAKAR--IG-H----F 104 (310)
Q Consensus 41 ~~~~~~~a~~~~~~Ga~~I~~l~~~~~d~--r~-~~G~--~~~~~----~~~i~~i~~~~~lPv~~kd~--i~-~----~ 104 (310)
.+.|+-.|+.++++|+++|- + ++- -. ..|. ...-. ...++.|++.+++||++..- .+ . .
T Consensus 23 ~a~D~~sA~~~~~aG~~ai~-v----s~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~~~~ 97 (295)
T 1xg4_A 23 GTINANHALLAQRAGYQAIY-L----SGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCSLPLLVDADIGFGSSAFNVA 97 (295)
T ss_dssp ECSSHHHHHHHHHTTCSCEE-E----CHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHCCSCEEEECTTCSSSSHHHHH
T ss_pred cCcCHHHHHHHHHcCCCEEE-E----CchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEecCCcccCCCHHHHH
Confidence 45677889999999999972 2 111 00 1121 01111 23456777788999888532 23 2 2
Q ss_pred HHHHHHHHcCCCeeeecCC--------------CChhHHHHHHHh---c--CCCCcEEeecCCH-----H----HHHHHH
Q 037779 105 VEAQILEAIGVDYVDESEV--------------LTPADEENHINK---H--NFRVPFVCGCRNL-----G----ESLRRI 156 (310)
Q Consensus 105 ~~~~~~~~aGad~v~~~~~--------------~~~~~~~~~~~~---~--~~~l~v~~~v~t~-----~----ea~~a~ 156 (310)
.-+..+.++||++|.+-+. .+..+....++. . +.+..+..-+... + .++...
T Consensus 98 ~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~gl~~ai~ra~ay~ 177 (295)
T 1xg4_A 98 RTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAIERAQAYV 177 (295)
T ss_dssp HHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhhhcCHHHHHHHHHHHH
Confidence 3456677899999983221 223334333322 1 2334454444332 2 233445
Q ss_pred HhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEE-EccCCCCCH
Q 037779 157 REGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVH-FAAGGVATP 235 (310)
Q Consensus 157 ~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~-ia~GGI~t~ 235 (310)
++|||.|.+.+. .+.+.++.+.+..++|+++ +.++|-...
T Consensus 178 eAGAd~i~~e~~---------------------------------------~~~~~~~~i~~~~~iP~~~N~~~~g~~p~ 218 (295)
T 1xg4_A 178 EAGAEMLFPEAI---------------------------------------TELAMYRQFADAVQVPILANITEFGATPL 218 (295)
T ss_dssp HTTCSEEEETTC---------------------------------------CSHHHHHHHHHHHCSCBEEECCSSSSSCC
T ss_pred HcCCCEEEEeCC---------------------------------------CCHHHHHHHHHHcCCCEEEEecccCCCCC
Confidence 678888877531 1345666676666789842 223443223
Q ss_pred HHHHHHHHcCCCEEEEccccccC
Q 037779 236 ADAAMMMQLGCDGVFVGSGVFKS 258 (310)
Q Consensus 236 ~di~~~~~~GadgV~VGsai~~~ 258 (310)
-+..++.++|++.|++|...+++
T Consensus 219 ~~~~eL~~~G~~~v~~~~~~~~a 241 (295)
T 1xg4_A 219 FTTDELRSAHVAMALYPLSAFRA 241 (295)
T ss_dssp CCHHHHHHTTCSEEEESSHHHHH
T ss_pred CCHHHHHHcCCCEEEEChHHHHH
Confidence 46788899999999999998874
No 196
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=97.15 E-value=0.0093 Score=55.81 Aligned_cols=51 Identities=20% Similarity=0.180 Sum_probs=39.9
Q ss_pred HHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcC-CCEEEEccccccCCCHHHHHH
Q 037779 213 VMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVFKSGDPVRRAR 266 (310)
Q Consensus 213 ~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~G-adgV~VGsai~~~~dp~~~~~ 266 (310)
.+.+++....|++ .||+.+++.+.++++.| ||.|.+|+.++..+|...+++
T Consensus 278 a~~ik~~~~~~v~---~~g~~~~~~ae~~l~~G~aD~V~~gR~~ladPdlp~k~~ 329 (358)
T 4a3u_A 278 SPEIRKVFKPPLV---LNQDYTFETAQAALDSGVADAISFGRPFIGNPDLPRRFF 329 (358)
T ss_dssp HHHHHHHCCSCEE---EESSCCHHHHHHHHHHTSCSEEEESHHHHHCTTHHHHHH
T ss_pred HHHHHHhcCCcEE---EeCCCCHHHHHHHHHcCCceEeHhhHHHHhChhHHHHHH
Confidence 4455555556763 37778999999999988 999999999999888765543
No 197
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=97.14 E-value=0.01 Score=52.22 Aligned_cols=124 Identities=15% Similarity=0.228 Sum_probs=84.1
Q ss_pred HHHHHHhhcCcceEeeccccc-hHHHHHHHHcCCCeeeec-CCCChhHHHHHHHhcCCCCcEEee-cCCHHHHHHHHHhC
Q 037779 83 LIKQIKSSVTIPVMAKARIGH-FVEAQILEAIGVDYVDES-EVLTPADEENHINKHNFRVPFVCG-CRNLGESLRRIREG 159 (310)
Q Consensus 83 ~i~~i~~~~~lPv~~kd~i~~-~~~~~~~~~aGad~v~~~-~~~~~~~~~~~~~~~~~~l~v~~~-v~t~~ea~~a~~~G 159 (310)
.++.+++.-=+||++.+.... ...++.+.+.|++.+-++ ......+.++.+++..+++.+.++ +-|.++++.+.++|
T Consensus 27 ~~~~l~~~~vv~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~~~~~~iGaGTVlt~~~a~~Ai~AG 106 (232)
T 4e38_A 27 INNQLKALKVIPVIAIDNAEDIIPLGKVLAENGLPAAEITFRSDAAVEAIRLLRQAQPEMLIGAGTILNGEQALAAKEAG 106 (232)
T ss_dssp HHHHHHHHCEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEECCCSHHHHHHHHHHT
T ss_pred HHHHHHhCCEEEEEEcCCHHHHHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHhCCCCEEeECCcCCHHHHHHHHHcC
Confidence 344444433367776655443 245678888999998643 223455677777765456777764 77899999999999
Q ss_pred CCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHH
Q 037779 160 AAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAA 239 (310)
Q Consensus 160 ad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~ 239 (310)
|+++..-+ .+.++++...+. .+|+ + =|+.|++++.
T Consensus 107 A~fIvsP~----------------------------------------~~~~vi~~~~~~-gi~~--i--pGv~TptEi~ 141 (232)
T 4e38_A 107 ATFVVSPG----------------------------------------FNPNTVRACQEI-GIDI--V--PGVNNPSTVE 141 (232)
T ss_dssp CSEEECSS----------------------------------------CCHHHHHHHHHH-TCEE--E--CEECSHHHHH
T ss_pred CCEEEeCC----------------------------------------CCHHHHHHHHHc-CCCE--E--cCCCCHHHHH
Confidence 99986411 123344444442 5787 4 4788999999
Q ss_pred HHHHcCCCEEEE
Q 037779 240 MMMQLGCDGVFV 251 (310)
Q Consensus 240 ~~~~~GadgV~V 251 (310)
+++++|+|.|-+
T Consensus 142 ~A~~~Gad~vK~ 153 (232)
T 4e38_A 142 AALEMGLTTLKF 153 (232)
T ss_dssp HHHHTTCCEEEE
T ss_pred HHHHcCCCEEEE
Confidence 999999999976
No 198
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=97.12 E-value=0.0023 Score=56.24 Aligned_cols=46 Identities=22% Similarity=0.400 Sum_probs=40.8
Q ss_pred HHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccC
Q 037779 211 DLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKS 258 (310)
Q Consensus 211 ~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~ 258 (310)
+.++.+++..++|+ ++.|||.+++++..++++|||+|.+|+..+..
T Consensus 65 ~~i~~i~~~~~ipv--~v~ggI~~~~~~~~~l~~Gad~V~lg~~~l~~ 110 (244)
T 1vzw_A 65 ALIAEVAQAMDIKV--ELSGGIRDDDTLAAALATGCTRVNLGTAALET 110 (244)
T ss_dssp HHHHHHHHHCSSEE--EEESSCCSHHHHHHHHHTTCSEEEECHHHHHC
T ss_pred HHHHHHHHhcCCcE--EEECCcCCHHHHHHHHHcCCCEEEECchHhhC
Confidence 67778877778899 56899999999999999999999999998874
No 199
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=97.08 E-value=0.056 Score=48.98 Aligned_cols=194 Identities=14% Similarity=0.171 Sum_probs=118.0
Q ss_pred HHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHh--hcCcceEee-ccccchHHHHHHHHcCCCeeeec-C
Q 037779 47 QARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKS--SVTIPVMAK-ARIGHFVEAQILEAIGVDYVDES-E 122 (310)
Q Consensus 47 ~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~--~~~lPv~~k-d~i~~~~~~~~~~~aGad~v~~~-~ 122 (310)
..+++++.++..|.++- +...+++.|... -...++.+.+ ..++||.++ |.-.+++.+..+.++|-+.|-++ +
T Consensus 37 vi~AAee~~sPvIlq~s--~~~~~~~~g~~~--~~~~v~~~A~~~~~~VPValHlDHg~~~e~i~~ai~~GFtSVMiDgS 112 (288)
T 3q94_A 37 ILAAAEEEKSPVILGVS--EGAARHMTGFKT--VVAMVKALIEEMNITVPVAIHLDHGSSFEKCKEAIDAGFTSVMIDAS 112 (288)
T ss_dssp HHHHHHHTTCCEEEEEE--HHHHHHTSCHHH--HHHHHHHHHHHTTCCSCEEEEEEEECSHHHHHHHHHHTCSEEEECCT
T ss_pred HHHHHHHhCCCEEEECC--hhhhhhcCCHHH--HHHHHHHHHHhcCCCCcEEEECCCCCCHHHHHHHHHcCCCeEEEeCC
Confidence 46777888888876551 111222133200 0234455666 678999986 44335677888899999998643 2
Q ss_pred CCChh-------HHHHHHHhcCCCCcEEee-----------------cCCHHHHHHHH-HhCCCEEEEe-cCCCCCchHH
Q 037779 123 VLTPA-------DEENHINKHNFRVPFVCG-----------------CRNLGESLRRI-REGAAMIRTK-GEAGTGNIVE 176 (310)
Q Consensus 123 ~~~~~-------~~~~~~~~~~~~l~v~~~-----------------v~t~~ea~~a~-~~Gad~I~v~-g~~~~~~~~~ 176 (310)
.++.+ ++.+..++ .++.+=.+ .++++|+.+.. +.|+|.+.+. |..++.
T Consensus 113 ~~p~eeNi~~Tk~vv~~ah~--~gvsVEaElG~vgG~Ed~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~HG~---- 186 (288)
T 3q94_A 113 HHPFEENVETTKKVVEYAHA--RNVSVEAELGTVGGQEDDVIAEGVIYADPAECKHLVEATGIDCLAPALGSVHGP---- 186 (288)
T ss_dssp TSCHHHHHHHHHHHHHHHHT--TTCEEEEEESBCBCSCSSCGGGGCBCCCHHHHHHHHHHHCCSEEEECSSCBSSC----
T ss_pred CCCHHHHHHHHHHHHHHHHH--cCCeEEEEeeeeccccCCcCCccccCCCHHHHHHHHHHHCCCEEEEEcCcccCC----
Confidence 23333 23333333 33322111 36788888766 6899998775 433221
Q ss_pred HHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccc
Q 037779 177 AVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVF 256 (310)
Q Consensus 177 ~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~ 256 (310)
++. ...-++++++.+.+..++|+|.=-++|+ ..+++++++++|..-|=++|.+.
T Consensus 187 --------------Y~~-----------~p~Ld~~~L~~I~~~v~vpLVlHGgSG~-~~e~i~~ai~~Gv~KiNi~Tdl~ 240 (288)
T 3q94_A 187 --------------YKG-----------EPNLGFAEMEQVRDFTGVPLVLHGGTGI-PTADIEKAISLGTSKINVNTENQ 240 (288)
T ss_dssp --------------CSS-----------SCCCCHHHHHHHHHHHCSCEEECCCTTC-CHHHHHHHHHTTEEEEEECHHHH
T ss_pred --------------cCC-----------CCccCHHHHHHHHHhcCCCEEEeCCCCC-CHHHHHHHHHcCCeEEEEChHHH
Confidence 110 0122688889998877899986666677 47899999999999999999775
Q ss_pred cCCCHHHHHHHHHHHHHcC---CChhhH
Q 037779 257 KSGDPVRRARAIVQAVTNY---SDPDVL 281 (310)
Q Consensus 257 ~~~dp~~~~~~~~~~~~~~---~~~~~~ 281 (310)
. ...+.+++.+.+. -+|+.+
T Consensus 241 ~-----a~~~~~r~~~~~~~~~~dpr~~ 263 (288)
T 3q94_A 241 I-----EFTKAVREVLNKDQEVYDPRKF 263 (288)
T ss_dssp H-----HHHHHHHHHHHHCSSCCCTHHH
T ss_pred H-----HHHHHHHHHHHhCCCcCCHHHH
Confidence 4 2344444444432 356555
No 200
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=97.08 E-value=0.0024 Score=55.95 Aligned_cols=46 Identities=22% Similarity=0.370 Sum_probs=40.9
Q ss_pred HHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccC
Q 037779 211 DLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKS 258 (310)
Q Consensus 211 ~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~ 258 (310)
+.++.+++..++|+ ++.|||.+++++..++++|||+|.+|+..+..
T Consensus 64 ~~i~~i~~~~~ipv--~v~ggi~~~~~~~~~l~~Gad~V~lg~~~l~~ 109 (244)
T 2y88_A 64 ELLAEVVGKLDVQV--ELSGGIRDDESLAAALATGCARVNVGTAALEN 109 (244)
T ss_dssp HHHHHHHHHCSSEE--EEESSCCSHHHHHHHHHTTCSEEEECHHHHHC
T ss_pred HHHHHHHHhcCCcE--EEECCCCCHHHHHHHHHcCCCEEEECchHhhC
Confidence 67788877778899 56899999999999999999999999998874
No 201
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=96.98 E-value=0.011 Score=54.71 Aligned_cols=112 Identities=18% Similarity=0.184 Sum_probs=76.2
Q ss_pred HHHHHHHHHcC--CcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeeeecC
Q 037779 45 PEQARIAEEAG--ACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVDESE 122 (310)
Q Consensus 45 ~~~a~~~~~~G--a~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~~~~ 122 (310)
.+.++.+.++| ++++ .+|. . .|. .....+.++.+++.+..|++++..+.+.+.++.+.++|||+|..+.
T Consensus 108 ~~~a~~~~~~g~~~~~i-~i~~-----~--~G~-~~~~~~~i~~lr~~~~~~~vi~G~v~s~e~A~~a~~aGad~Ivvs~ 178 (336)
T 1ypf_A 108 YEFVQQLAAEHLTPEYI-TIDI-----A--HGH-SNAVINMIQHIKKHLPESFVIAGNVGTPEAVRELENAGADATKVGI 178 (336)
T ss_dssp HHHHHHHHHTTCCCSEE-EEEC-----S--SCC-SHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECS
T ss_pred HHHHHHHHhcCCCCCEE-EEEC-----C--CCC-cHHHHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEec
Confidence 36688889999 8887 3421 0 111 0122578899999886555555545566889999999999987421
Q ss_pred -C---C----------C--hhHHHHHHHhcCCCCcEEe--ecCCHHHHHHHHHhCCCEEEEe
Q 037779 123 -V---L----------T--PADEENHINKHNFRVPFVC--GCRNLGESLRRIREGAAMIRTK 166 (310)
Q Consensus 123 -~---~----------~--~~~~~~~~~~~~~~l~v~~--~v~t~~ea~~a~~~Gad~I~v~ 166 (310)
. . + ....+..+.+ ..++++++ ++.+..++.+++.+|||.|.+.
T Consensus 179 hgG~~~~~~~~~~~g~~g~~~~~l~~v~~-~~~ipVIa~GGI~~g~Dv~kalalGAdaV~iG 239 (336)
T 1ypf_A 179 GPGKVCITKIKTGFGTGGWQLAALRWCAK-AASKPIIADGGIRTNGDVAKSIRFGATMVMIG 239 (336)
T ss_dssp SCSTTCHHHHHHSCSSTTCHHHHHHHHHH-TCSSCEEEESCCCSTHHHHHHHHTTCSEEEES
T ss_pred CCCceeecccccCcCCchhHHHHHHHHHH-HcCCcEEEeCCCCCHHHHHHHHHcCCCEEEeC
Confidence 1 0 0 1233333433 23788888 7999999999999999999985
No 202
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=96.97 E-value=0.0081 Score=51.21 Aligned_cols=102 Identities=15% Similarity=0.122 Sum_probs=69.0
Q ss_pred HHHHHHHcCCCeeeec-CCCChhHHHHHHHhc-CCCCcEEe-ecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHH
Q 037779 106 EAQILEAIGVDYVDES-EVLTPADEENHINKH-NFRVPFVC-GCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVR 182 (310)
Q Consensus 106 ~~~~~~~aGad~v~~~-~~~~~~~~~~~~~~~-~~~l~v~~-~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~ 182 (310)
.++.+.+.|++.+..+ ......+.++.+++. +.++.+.+ .++|++++..+.+.|+|++ +. +.+
T Consensus 27 ~~~~~~~~G~~~iev~~~~~~~~~~i~~ir~~~~~~~~ig~~~v~~~~~~~~a~~~Gad~i-v~-~~~------------ 92 (205)
T 1wa3_A 27 KALAVFEGGVHLIEITFTVPDADTVIKELSFLKEKGAIIGAGTVTSVEQCRKAVESGAEFI-VS-PHL------------ 92 (205)
T ss_dssp HHHHHHHTTCCEEEEETTSTTHHHHHHHTHHHHHTTCEEEEESCCSHHHHHHHHHHTCSEE-EC-SSC------------
T ss_pred HHHHHHHCCCCEEEEeCCChhHHHHHHHHHHHCCCCcEEEecccCCHHHHHHHHHcCCCEE-Ec-CCC------------
Confidence 4567777899998643 222333455666553 23566777 5689999999999999999 64 211
Q ss_pred HhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEc
Q 037779 183 SVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVG 252 (310)
Q Consensus 183 ~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VG 252 (310)
+.++++..++ ..+|+ ++ |+.|++++.++.++|+|.|-+-
T Consensus 93 --------------------------~~~~~~~~~~-~g~~v--i~--g~~t~~e~~~a~~~Gad~vk~~ 131 (205)
T 1wa3_A 93 --------------------------DEEISQFCKE-KGVFY--MP--GVMTPTELVKAMKLGHTILKLF 131 (205)
T ss_dssp --------------------------CHHHHHHHHH-HTCEE--EC--EECSHHHHHHHHHTTCCEEEET
T ss_pred --------------------------CHHHHHHHHH-cCCcE--EC--CcCCHHHHHHHHHcCCCEEEEc
Confidence 1223344433 35788 43 7779999999999999998753
No 203
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=96.93 E-value=0.12 Score=46.69 Aligned_cols=195 Identities=13% Similarity=0.109 Sum_probs=116.7
Q ss_pred HHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEee-ccccchHHHHHHHHcCCCeeeec-CCC
Q 037779 47 QARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAK-ARIGHFVEAQILEAIGVDYVDES-EVL 124 (310)
Q Consensus 47 ~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~k-d~i~~~~~~~~~~~aGad~v~~~-~~~ 124 (310)
..+++++.++..|.++- +...+ +.|.. .-...++.+.+.+++||.++ |.-.+++.+..+.++|-+.|-++ +.+
T Consensus 34 vl~AAe~~~sPvIlq~s--~~~~~-y~g~~--~~~~~v~~~a~~~~VPValHlDHg~~~e~i~~ai~~GFtSVMiDgS~l 108 (286)
T 1gvf_A 34 ILEVCSEMRSPVILAGT--PGTFK-HIALE--EIYALCSAYSTTYNMPLALHLDHHESLDDIRRKVHAGVRSAMIDGSHF 108 (286)
T ss_dssp HHHHHHHHTCCCEEEEC--TTHHH-HSCHH--HHHHHHHHHHHHTTSCBEEEEEEECCHHHHHHHHHTTCCEEEECCTTS
T ss_pred HHHHHHHhCCCEEEECC--hhHHh-hcCHH--HHHHHHHHHHHhCCCcEEEEcCCCCCHHHHHHHHHcCCCeEEECCCCC
Confidence 46777777888775551 11222 22310 01234556666788999886 44335677888889999887633 223
Q ss_pred Chh-------HHHHHHHhcCCCCcE----------Ee-------ecCCHHHHHHHH-HhCCCEEEEe-cCCCCCchHHHH
Q 037779 125 TPA-------DEENHINKHNFRVPF----------VC-------GCRNLGESLRRI-REGAAMIRTK-GEAGTGNIVEAV 178 (310)
Q Consensus 125 ~~~-------~~~~~~~~~~~~l~v----------~~-------~v~t~~ea~~a~-~~Gad~I~v~-g~~~~~~~~~~~ 178 (310)
+.+ ++.+..++.+..+.. .+ -.++++|+.+.. +.|+|.+.+. |..++.
T Consensus 109 p~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgg~ed~~~~~~~~~~~T~Peea~~Fv~~TgvD~LAvaiGt~HG~------ 182 (286)
T 1gvf_A 109 PFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFVELTGVDSLAVAIGTAHGL------ 182 (286)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEEESCCC-----------CCSSCCHHHHHHHHHHHCCSEEEECSSCCSSC------
T ss_pred CHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCcccCcccccccccCCCHHHHHHHHHHHCCCEEEeecCccccC------
Confidence 333 333444333321100 00 125677887766 5788888764 433321
Q ss_pred HHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccC
Q 037779 179 RHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKS 258 (310)
Q Consensus 179 ~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~ 258 (310)
++. ...-++++++.+.+..++|+|.=-++|+ ..+++++++++|..-|=++|.+-.
T Consensus 183 ------------Y~~-----------~p~Ld~~~L~~I~~~~~vpLVlHGgSG~-~~e~i~~ai~~Gv~KiNi~Tdl~~- 237 (286)
T 1gvf_A 183 ------------YSK-----------TPKIDFQRLAEIREVVDVPLVLHGASDV-PDEFVRRTIELGVTKVNVATELKI- 237 (286)
T ss_dssp ------------CSS-----------CCCCCHHHHHHHHHHCCSCEEECCCTTC-CHHHHHHHHHTTEEEEEECHHHHH-
T ss_pred ------------cCC-----------CCccCHHHHHHHHHhcCCCEEEECCCCC-CHHHHHHHHHCCCeEEEEChHHHH-
Confidence 110 0123688999999888899976556677 478899999999999999997765
Q ss_pred CCHHHHHHHHHHHHHcC---CChhhH
Q 037779 259 GDPVRRARAIVQAVTNY---SDPDVL 281 (310)
Q Consensus 259 ~dp~~~~~~~~~~~~~~---~~~~~~ 281 (310)
...+.+++.+.+. .+|+.+
T Consensus 238 ----a~~~~~r~~~~~~~~~~dpr~~ 259 (286)
T 1gvf_A 238 ----AFAGAVKAWFAENPQGNDPRYY 259 (286)
T ss_dssp ----HHHHHHHHHHHHCTTCCCHHHH
T ss_pred ----HHHHHHHHHHHhCcccCChHHH
Confidence 2344455544443 257554
No 204
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=96.91 E-value=0.0053 Score=54.85 Aligned_cols=141 Identities=15% Similarity=0.200 Sum_probs=77.8
Q ss_pred HHHHHHHhcCCCCcEEeecCC------HH-HHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcc------eeccccc
Q 037779 128 DEENHINKHNFRVPFVCGCRN------LG-ESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGD------IRVLRNM 194 (310)
Q Consensus 128 ~~~~~~~~~~~~l~v~~~v~t------~~-ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~------~~~l~~~ 194 (310)
+.++.++++ +..++++.+- .. .++.+.++|+|++.+++..+......+++.+++.+.. ...+..+
T Consensus 69 ~~v~~Lk~~--g~~VflDlK~~DIpnTv~~a~~~~~~~gaD~vTVh~~~G~~~~~~a~~~~~~~g~~~~~li~VtvLTS~ 146 (255)
T 3ldv_A 69 DFVRELHKR--GFSVFLDLKFHDIPNTCSKAVKAAAELGVWMVNVHASGGERMMAASREILEPYGKERPLLIGVTVLTSM 146 (255)
T ss_dssp HHHHHHHHT--TCCEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEGGGCHHHHHHHHHHHGGGGGGSCEEEEECSCTTC
T ss_pred HHHHHHHhc--CCCEEEEEecccchhHHHHHHHHHHhcCCCEEEEeccCCHHHHHHHHHHHhhcCCCCceEEEEEEEecC
Confidence 445555553 5667777542 22 2345667899999998654433333444444333211 2234433
Q ss_pred CchhH-------------Hhh---hcc-----CCCcHHHHHHHHhcCCCCEEEEccCCCCCHH-----------HHHHHH
Q 037779 195 DDDEV-------------FTF---AKN-----IAAPYDLVMQTKQLGRLPVVHFAAGGVATPA-----------DAAMMM 242 (310)
Q Consensus 195 ~~d~~-------------~~~---~~~-----~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~-----------di~~~~ 242 (310)
+...+ ... +.+ +..+..-+..+++...-..+ +...||. ++ +..+++
T Consensus 147 s~~~l~~~g~~~~~~~~V~~~A~~a~~aG~~GvV~sa~e~~~iR~~~g~~fl-~VtPGIr-~qg~~~~dQ~Rv~t~~~a~ 224 (255)
T 3ldv_A 147 ESADLQGIGILSAPQDHVLRLATLTKNAGLDGVVCSAQEASLLKQHLGREFK-LVTPGIR-PAGSEQGDQRRIMTPAQAI 224 (255)
T ss_dssp CHHHHHHTTCCSCHHHHHHHHHHHHHHTTCSEEECCHHHHHHHHHHHCTTSE-EEEECCC-CTTSTTSSCSSSCCHHHHH
T ss_pred CHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCEEEECHHHHHHHHHhcCCCcE-EEeCCcc-cCcCCccceeccCCHHHHH
Confidence 32211 111 111 11222233444443211122 2357885 33 156788
Q ss_pred HcCCCEEEEccccccCCCHHHHHHHHHHHH
Q 037779 243 QLGCDGVFVGSGVFKSGDPVRRARAIVQAV 272 (310)
Q Consensus 243 ~~GadgV~VGsai~~~~dp~~~~~~~~~~~ 272 (310)
++|+|.+++||+|++++||.+.++++++.+
T Consensus 225 ~aGad~iVvGr~I~~a~dp~~a~~~i~~ei 254 (255)
T 3ldv_A 225 ASGSDYLVIGRPITQAAHPEVVLEEINSSL 254 (255)
T ss_dssp HTTCSEEEECHHHHTCSCHHHHHHHHHHHC
T ss_pred HcCCCEEEECHHHhCCCCHHHHHHHHHHhh
Confidence 999999999999999999999999887654
No 205
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=96.91 E-value=0.06 Score=49.04 Aligned_cols=174 Identities=16% Similarity=0.213 Sum_probs=101.1
Q ss_pred cCCCHHHHHHHHHcCCcEEEecccccch--hh-hcCCC--CCCCC----hHHHHHHHhhcCcceEeeccc--cc----hH
Q 037779 41 DVVTPEQARIAEEAGACAVMALERVPAD--IR-AQGGV--ARMSD----PQLIKQIKSSVTIPVMAKARI--GH----FV 105 (310)
Q Consensus 41 ~~~~~~~a~~~~~~Ga~~I~~l~~~~~d--~r-~~~G~--~~~~~----~~~i~~i~~~~~lPv~~kd~i--~~----~~ 105 (310)
.+.|+-.|+.++++|+++|- + ++ .- ...|. ...-. ...++.|++.+++||++..-. +. ..
T Consensus 28 ~a~D~~sA~l~e~aGf~ai~-v----s~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~Gyg~~~~v~~ 102 (298)
T 3eoo_A 28 GAITAYAAKMAEAVGFKAVY-L----SGGGVAANSLGIPDLGISTMDDVLVDANRITNATNLPLLVDIDTGWGGAFNIAR 102 (298)
T ss_dssp ECSSHHHHHHHHHHTCSCEE-E----CHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHCCSCEEEECTTCSSSHHHHHH
T ss_pred cCCCHHHHHHHHHcCCCEEE-E----CcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhhcCCeEEEECCCCCCCHHHHHH
Confidence 45677889999999999872 2 11 00 11121 11112 334567777889999885322 22 13
Q ss_pred HHHHHHHcCCCeeeecC--------------CCChhHHHHHHHh-----cCCCCcEEeecCCH-----HH----HHHHHH
Q 037779 106 EAQILEAIGVDYVDESE--------------VLTPADEENHINK-----HNFRVPFVCGCRNL-----GE----SLRRIR 157 (310)
Q Consensus 106 ~~~~~~~aGad~v~~~~--------------~~~~~~~~~~~~~-----~~~~l~v~~~v~t~-----~e----a~~a~~ 157 (310)
.+..+.++||.+|++-+ ..+..+....++. .+.++.+.+-+... +| ++...+
T Consensus 103 ~v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~~~gldeai~Ra~ay~~ 182 (298)
T 3eoo_A 103 TIRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAAAAEGIDAAIERAIAYVE 182 (298)
T ss_dssp HHHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhhhhcCHHHHHHHHHhhHh
Confidence 45667789999998321 1234455555532 23445666655543 12 233446
Q ss_pred hCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEE-EccCCCCCHH
Q 037779 158 EGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVH-FAAGGVATPA 236 (310)
Q Consensus 158 ~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~-ia~GGI~t~~ 236 (310)
+|||.|.+.+. .+.+.++.+.+..++|+++ +.++|-...-
T Consensus 183 AGAD~if~~~~---------------------------------------~~~ee~~~~~~~~~~Pl~~n~~~~g~tp~~ 223 (298)
T 3eoo_A 183 AGADMIFPEAM---------------------------------------KTLDDYRRFKEAVKVPILANLTEFGSTPLF 223 (298)
T ss_dssp TTCSEEEECCC---------------------------------------CSHHHHHHHHHHHCSCBEEECCTTSSSCCC
T ss_pred cCCCEEEeCCC---------------------------------------CCHHHHHHHHHHcCCCeEEEeccCCCCCCC
Confidence 78888887632 0233344444444578742 2345532124
Q ss_pred HHHHHHHcCCCEEEEccccccC
Q 037779 237 DAAMMMQLGCDGVFVGSGVFKS 258 (310)
Q Consensus 237 di~~~~~~GadgV~VGsai~~~ 258 (310)
+..++.++|+.-|..|...+++
T Consensus 224 ~~~eL~~lGv~~v~~~~~~~ra 245 (298)
T 3eoo_A 224 TLDELKGANVDIALYCCGAYRA 245 (298)
T ss_dssp CHHHHHHTTCCEEEECSHHHHH
T ss_pred CHHHHHHcCCeEEEEchHHHHH
Confidence 6888999999999999998874
No 206
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=96.89 E-value=0.0038 Score=58.59 Aligned_cols=124 Identities=21% Similarity=0.218 Sum_probs=80.4
Q ss_pred cCcceEee--ccccchHHHHHHHHcCCCeeeecCCCChhHHHHHHHhcCCCCcEEeec--CCHHHHHHHHHhCCCEEEEe
Q 037779 91 VTIPVMAK--ARIGHFVEAQILEAIGVDYVDESEVLTPADEENHINKHNFRVPFVCGC--RNLGESLRRIREGAAMIRTK 166 (310)
Q Consensus 91 ~~lPv~~k--d~i~~~~~~~~~~~aGad~v~~~~~~~~~~~~~~~~~~~~~l~v~~~v--~t~~ea~~a~~~Gad~I~v~ 166 (310)
.++|++.- +.+.....+..+..+|.-+++. ...+++++.+.+++...-+...+.. .+.+.++++.++|+|+|.+.
T Consensus 41 l~~Pii~ApM~~vte~~lA~A~a~~Gg~gvi~-~~~s~ee~~~~i~~~~~~~~~~~g~~~~~~e~~~~a~~aGvdvI~id 119 (361)
T 3r2g_A 41 LNLPVISANMDTITESNMANFMHSKGAMGALH-RFMTIEENIQEFKKCKGPVFVSVGCTENELQRAEALRDAGADFFCVD 119 (361)
T ss_dssp ESSCEEECCSTTTCSHHHHHHHHHTTCEEBCC-SCSCHHHHHHHHHTCCSCCBEEECSSHHHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCEEECCCCCchHHHHHHHHHHcCCCEEEe-CCCCHHHHHHHHhhcceEEEEEcCCCHHHHHHHHHHHHcCCCEEEEe
Confidence 57888764 3334445666777788777653 3467888888877632112222222 23445677788999999886
Q ss_pred cCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhc-CCCCEEEEccCCCCCHHHHHHHHHcC
Q 037779 167 GEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQL-GRLPVVHFAAGGVATPADAAMMMQLG 245 (310)
Q Consensus 167 g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~-~~iPVv~ia~GGI~t~~di~~~~~~G 245 (310)
...+.. ...++.++.+++. .++||+ .|++.|+++++.+.++|
T Consensus 120 ~a~G~~----------------------------------~~~~e~I~~ir~~~~~~~Vi---~G~V~T~e~A~~a~~aG 162 (361)
T 3r2g_A 120 VAHAHA----------------------------------KYVGKTLKSLRQLLGSRCIM---AGNVATYAGADYLASCG 162 (361)
T ss_dssp CSCCSS----------------------------------HHHHHHHHHHHHHHTTCEEE---EEEECSHHHHHHHHHTT
T ss_pred CCCCCc----------------------------------HhHHHHHHHHHHhcCCCeEE---EcCcCCHHHHHHHHHcC
Confidence 321100 0024566677664 367884 27799999999999999
Q ss_pred CCEEEEc
Q 037779 246 CDGVFVG 252 (310)
Q Consensus 246 adgV~VG 252 (310)
+|+|.||
T Consensus 163 aD~I~Vg 169 (361)
T 3r2g_A 163 ADIIKAG 169 (361)
T ss_dssp CSEEEEC
T ss_pred CCEEEEc
Confidence 9999995
No 207
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=96.89 E-value=0.011 Score=57.82 Aligned_cols=113 Identities=17% Similarity=0.231 Sum_probs=76.8
Q ss_pred CHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhc-CcceEeeccccchHHHHHHHHcCCCeeeec-
Q 037779 44 TPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSV-TIPVMAKARIGHFVEAQILEAIGVDYVDES- 121 (310)
Q Consensus 44 ~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~-~lPv~~kd~i~~~~~~~~~~~aGad~v~~~- 121 (310)
..+.++.+.++|++.| .++ .. .|.. ....+.++++++.+ ++||++... .+.+.++.+.++|||+|...
T Consensus 232 ~~~~a~~l~~aG~d~I-~id-----~a--~g~~-~~~~~~i~~ir~~~p~~~Vi~g~v-~t~e~a~~l~~aGaD~I~Vg~ 301 (496)
T 4fxs_A 232 NEERVKALVEAGVDVL-LID-----SS--HGHS-EGVLQRIRETRAAYPHLEIIGGNV-ATAEGARALIEAGVSAVKVGI 301 (496)
T ss_dssp CHHHHHHHHHTTCSEE-EEE-----CS--CTTS-HHHHHHHHHHHHHCTTCCEEEEEE-CSHHHHHHHHHHTCSEEEECS
T ss_pred hHHHHHHHHhccCceE-Eec-----cc--cccc-hHHHHHHHHHHHHCCCceEEEccc-CcHHHHHHHHHhCCCEEEECC
Confidence 3688999999999988 442 11 1110 01157888999887 899988433 34578889999999999731
Q ss_pred ----C---------CCChhHHHHHHHh--cCCCCcEEe--ecCCHHHHHHHHHhCCCEEEEe
Q 037779 122 ----E---------VLTPADEENHINK--HNFRVPFVC--GCRNLGESLRRIREGAAMIRTK 166 (310)
Q Consensus 122 ----~---------~~~~~~~~~~~~~--~~~~l~v~~--~v~t~~ea~~a~~~Gad~I~v~ 166 (310)
. ..+....+..+.+ +..++++++ ++.+..++.+++.+|||.+.+.
T Consensus 302 g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GAd~V~iG 363 (496)
T 4fxs_A 302 GPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMVG 363 (496)
T ss_dssp SCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred CCCcCcccccccCCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHHHHHcCCCeEEec
Confidence 1 0111222222322 224688888 6999999999999999999885
No 208
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=96.89 E-value=0.0023 Score=56.78 Aligned_cols=51 Identities=16% Similarity=0.337 Sum_probs=44.2
Q ss_pred CcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCC
Q 037779 208 APYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGD 260 (310)
Q Consensus 208 ~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~d 260 (310)
...++++.+.+...+|+ -+.|||.|.+++.+++++||+-|++||+.++.++
T Consensus 62 ~~~~~i~~i~~~~~~pl--~vGGGIrs~e~~~~~l~~GadkVii~t~a~~~p~ 112 (243)
T 4gj1_A 62 RQFALIEKLAKEVSVNL--QVGGGIRSKEEVKALLDCGVKRVVIGSMAIKDAT 112 (243)
T ss_dssp CCHHHHHHHHHHCCSEE--EEESSCCCHHHHHHHHHTTCSEEEECTTTTTCHH
T ss_pred hHHHHHHHHHHhcCCCe--EeccccccHHHHHHHHHcCCCEEEEccccccCCc
Confidence 35778888888788999 5699999999999999999999999999888443
No 209
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=96.87 E-value=0.071 Score=47.47 Aligned_cols=170 Identities=19% Similarity=0.143 Sum_probs=95.2
Q ss_pred cCCCHHHHHHHHHcCCcEEEecccccch--hhhcCCC--CCCCC----hHHHHHHHhhcCcceEeeccccc----hHHHH
Q 037779 41 DVVTPEQARIAEEAGACAVMALERVPAD--IRAQGGV--ARMSD----PQLIKQIKSSVTIPVMAKARIGH----FVEAQ 108 (310)
Q Consensus 41 ~~~~~~~a~~~~~~Ga~~I~~l~~~~~d--~r~~~G~--~~~~~----~~~i~~i~~~~~lPv~~kd~i~~----~~~~~ 108 (310)
.+-|+-.|+.++++|+++|-.- + .-...|. ...-. ...++.|++.+++||++..-.++ ..-+.
T Consensus 26 ~ayD~~sA~~~~~aG~dai~vg-----~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~~~pviaD~~~Gyg~~~~~~~~ 100 (255)
T 2qiw_A 26 TVWDTWSAGLVEEAGFSGLTIG-----SHPVADATGSSDGENMNFADYMAVVKKITSAVSIPVSVDVESGYGLSPADLIA 100 (255)
T ss_dssp EESSHHHHHHHHHTTCSCEEEC-----HHHHHHHTTCCTTTCSCHHHHHHHHHHHHHHCSSCEEEECTTCTTCCHHHHHH
T ss_pred cCcCHHHHHHHHHcCCCEEEEC-----hHHHHHhCCCCCCCCcCHHHHHHHHHHHHhcCCCCEEeccCCCcCcHHHHHHH
Confidence 4567788999999999997321 1 1111121 11111 22456777788899998533321 34456
Q ss_pred HHHHcCCCeeeecCC--------CChhHHHHHHHh---c----CCCCcEEeecCC-----------HHH----HHHHHHh
Q 037779 109 ILEAIGVDYVDESEV--------LTPADEENHINK---H----NFRVPFVCGCRN-----------LGE----SLRRIRE 158 (310)
Q Consensus 109 ~~~~aGad~v~~~~~--------~~~~~~~~~~~~---~----~~~l~v~~~v~t-----------~~e----a~~a~~~ 158 (310)
.+.++||+.|.+-+. .+..+..+.++. . +....+..-+.. .++ ++...++
T Consensus 101 ~l~~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~~~~~~~~~~ai~ra~a~~eA 180 (255)
T 2qiw_A 101 QILEAGAVGINVEDVVHSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGADVFEDPMVEAIKRIKLMEQA 180 (255)
T ss_dssp HHHHTTCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCTTTSSSHHHHHHHHHHHHHHH
T ss_pred HHHHcCCcEEEECCCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhhccCCcchHHHHHHHHHHHHHHHc
Confidence 677899999984322 223344444432 1 222223332221 122 2233356
Q ss_pred CCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCH-HH
Q 037779 159 GAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATP-AD 237 (310)
Q Consensus 159 Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~-~d 237 (310)
|||.|.+.+. .+.+..+.+.+..++|+.+....|-.+| -.
T Consensus 181 GAd~i~~e~~---------------------------------------~~~~~~~~i~~~~~~P~n~~~~~~~~~p~~~ 221 (255)
T 2qiw_A 181 GARSVYPVGL---------------------------------------STAEQVERLVDAVSVPVNITAHPVDGHGAGD 221 (255)
T ss_dssp TCSEEEECCC---------------------------------------CSHHHHHHHHTTCSSCBEEECBTTTBBTTBC
T ss_pred CCcEEEEcCC---------------------------------------CCHHHHHHHHHhCCCCEEEEecCCCCCCCCC
Confidence 7766665421 1345677777777789875432332122 35
Q ss_pred HHHHHHcCCCEEEEccc
Q 037779 238 AAMMMQLGCDGVFVGSG 254 (310)
Q Consensus 238 i~~~~~~GadgV~VGsa 254 (310)
+.++.++|+.-|..|..
T Consensus 222 ~~eL~~lGv~~v~~~~~ 238 (255)
T 2qiw_A 222 LATLAGLGVRRVTFGPL 238 (255)
T ss_dssp HHHHHHTTCCEEECTTH
T ss_pred HHHHHHcCCCEEEEHHH
Confidence 78889999999999987
No 210
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=96.87 E-value=0.014 Score=55.44 Aligned_cols=112 Identities=18% Similarity=0.193 Sum_probs=75.9
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhc-CcceEeeccccchHHHHHHHHcCCCeeeec--
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSV-TIPVMAKARIGHFVEAQILEAIGVDYVDES-- 121 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~-~lPv~~kd~i~~~~~~~~~~~aGad~v~~~-- 121 (310)
.+.++.+.++|++.+ .+|....+.+ ...+.++.+++.+ ++||++.. +.+.+.++.+.++|+|+|...
T Consensus 155 ~~~a~~~~~~G~d~i-~i~~~~g~~~--------~~~e~i~~ir~~~~~~pviv~~-v~~~~~a~~a~~~Gad~I~vg~~ 224 (404)
T 1eep_A 155 IERVEELVKAHVDIL-VIDSAHGHST--------RIIELIKKIKTKYPNLDLIAGN-IVTKEAALDLISVGADCLKVGIG 224 (404)
T ss_dssp HHHHHHHHHTTCSEE-EECCSCCSSH--------HHHHHHHHHHHHCTTCEEEEEE-ECSHHHHHHHHTTTCSEEEECSS
T ss_pred HHHHHHHHHCCCCEE-EEeCCCCChH--------HHHHHHHHHHHHCCCCeEEEcC-CCcHHHHHHHHhcCCCEEEECCC
Confidence 577888999999998 3431111111 1156778888888 89998743 234577888999999998651
Q ss_pred -----------C-CCChhHHHHHHHh--cCCCCcEEe--ecCCHHHHHHHHHhCCCEEEEe
Q 037779 122 -----------E-VLTPADEENHINK--HNFRVPFVC--GCRNLGESLRRIREGAAMIRTK 166 (310)
Q Consensus 122 -----------~-~~~~~~~~~~~~~--~~~~l~v~~--~v~t~~ea~~a~~~Gad~I~v~ 166 (310)
. ..+....+..+.+ ...++++++ ++.+.+++.+++.+|||.|.+.
T Consensus 225 ~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~ala~GAd~V~iG 285 (404)
T 1eep_A 225 PGSICTTRIVAGVGVPQITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVMIG 285 (404)
T ss_dssp CSTTSHHHHHHCCCCCHHHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHHHTCSEEEEC
T ss_pred CCcCcCccccCCCCcchHHHHHHHHHHHhhcCceEEEECCCCCHHHHHHHHHcCCCHHhhC
Confidence 1 1112223333433 234688888 6999999999999999999885
No 211
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=96.86 E-value=0.15 Score=45.87 Aligned_cols=172 Identities=20% Similarity=0.188 Sum_probs=95.4
Q ss_pred cCCCHHHHHHHHHcCCcEEEecccccch-hhhcCCC--CCCCC----hHHHHHHHhhcCcceEeeccc--c-ch----HH
Q 037779 41 DVVTPEQARIAEEAGACAVMALERVPAD-IRAQGGV--ARMSD----PQLIKQIKSSVTIPVMAKARI--G-HF----VE 106 (310)
Q Consensus 41 ~~~~~~~a~~~~~~Ga~~I~~l~~~~~d-~r~~~G~--~~~~~----~~~i~~i~~~~~lPv~~kd~i--~-~~----~~ 106 (310)
.+.|+-.|+.++++|+++|-.- .+ .-...|- ...-. ...++.|++.+++||++..-. + .. ..
T Consensus 22 ~a~D~~sA~~~~~aG~~ai~vs----g~s~a~~~G~pD~~~vt~~em~~~~~~I~~~~~~pviaD~d~Gyg~~~~~~~~~ 97 (275)
T 2ze3_A 22 NAWDVASARLLEAAGFTAIGTT----SAGIAHARGRTDGQTLTRDEMGREVEAIVRAVAIPVNADIEAGYGHAPEDVRRT 97 (275)
T ss_dssp EESSHHHHHHHHHHTCSCEEEC----HHHHHHHSCCCSSSSSCHHHHHHHHHHHHHHCSSCEEEECTTCSSSSHHHHHHH
T ss_pred cccCHHHHHHHHHcCCCEEEEC----cHHHHHhCCCCCCCCCCHHHHHHHHHHHHhhcCCCEEeecCCCCCCCHHHHHHH
Confidence 3457788999999999997221 00 1111121 11111 234567777889999985322 2 22 34
Q ss_pred HHHHHHcCCCeeeecCC--------CChhHHHHHHHh---c----CCCCcEEeecCC------------HHHH----HHH
Q 037779 107 AQILEAIGVDYVDESEV--------LTPADEENHINK---H----NFRVPFVCGCRN------------LGES----LRR 155 (310)
Q Consensus 107 ~~~~~~aGad~v~~~~~--------~~~~~~~~~~~~---~----~~~l~v~~~v~t------------~~ea----~~a 155 (310)
+..+.++||.+|++-+. .+..+....++. . +....+..-+.. .+++ +..
T Consensus 98 v~~l~~aGaagv~iED~~~~~~k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~~~~~~~~ai~Ra~ay 177 (275)
T 2ze3_A 98 VEHFAALGVAGVNLEDATGLTPTELYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGATDEERLAETVRRGQAY 177 (275)
T ss_dssp HHHHHHTTCSEEEEECBCSSSSSCBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCcEEEECCCcCCCCCccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhccccccchhhHHHHHHHHHHH
Confidence 56677899999984322 223344433332 1 223333332222 1221 222
Q ss_pred HHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCH
Q 037779 156 IREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATP 235 (310)
Q Consensus 156 ~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~ 235 (310)
.++|||.|.+.+ ..+.+.++.+.+..++|+.+....+.
T Consensus 178 ~eAGAd~i~~e~---------------------------------------~~~~~~~~~i~~~~~~P~n~~~~~~~--- 215 (275)
T 2ze3_A 178 ADAGADGIFVPL---------------------------------------ALQSQDIRALADALRVPLNVMAFPGS--- 215 (275)
T ss_dssp HHTTCSEEECTT---------------------------------------CCCHHHHHHHHHHCSSCEEEECCTTS---
T ss_pred HHCCCCEEEECC---------------------------------------CCCHHHHHHHHHhcCCCEEEecCCCC---
Confidence 345666655532 11345667777767789865433333
Q ss_pred HHHHHHHHcCCCEEEEccccccC
Q 037779 236 ADAAMMMQLGCDGVFVGSGVFKS 258 (310)
Q Consensus 236 ~di~~~~~~GadgV~VGsai~~~ 258 (310)
-...++.++|+.-|..|...+++
T Consensus 216 ~~~~eL~~lGv~~v~~~~~~~ra 238 (275)
T 2ze3_A 216 PVPRALLDAGAARVSFGQSLMLA 238 (275)
T ss_dssp CCHHHHHHTTCSEEECTTHHHHH
T ss_pred CCHHHHHHcCCcEEEEChHHHHH
Confidence 34588899999999999988874
No 212
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=96.85 E-value=0.014 Score=55.50 Aligned_cols=112 Identities=22% Similarity=0.292 Sum_probs=76.8
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeeeec---
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVDES--- 121 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~~~--- 121 (310)
.+.++.+.++|++.|+ + |. .+ |.. ....+.++.+++.+++||+++.. .+.+.++.+.++|||+|...
T Consensus 146 ~e~~~~lveaGvdvIv-l-----dt-a~-G~~-~~~~e~I~~ik~~~~i~Vi~g~V-~t~e~A~~a~~aGAD~I~vG~g~ 215 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIV-L-----DS-AH-GHS-LNIIRTLKEIKSKMNIDVIVGNV-VTEEATKELIENGADGIKVGIGP 215 (400)
T ss_dssp CHHHHHHHHHTCSEEE-E-----CC-SC-CSB-HHHHHHHHHHHTTCCCEEEEEEE-CSHHHHHHHHHTTCSEEEECC--
T ss_pred HHHHHHHHHcCCCEEE-E-----eC-CC-CCc-ccHHHHHHHHHhcCCCeEEEeec-CCHHHHHHHHHcCCCEEEEeCCC
Confidence 6889999999999883 3 11 11 110 00156788888888999987432 34578899999999998741
Q ss_pred ------C-----CCChhHHHHHHHh--cCCCCcEEe--ecCCHHHHHHHHHhCCCEEEEe
Q 037779 122 ------E-----VLTPADEENHINK--HNFRVPFVC--GCRNLGESLRRIREGAAMIRTK 166 (310)
Q Consensus 122 ------~-----~~~~~~~~~~~~~--~~~~l~v~~--~v~t~~ea~~a~~~Gad~I~v~ 166 (310)
. ..+....+..+.+ ...++++++ ++.+..++.+++.+||+.|.+.
T Consensus 216 Gs~~~tr~~~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~kalalGAd~V~vG 275 (400)
T 3ffs_A 216 GSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMIG 275 (400)
T ss_dssp -------CCSCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHTTTCSEEEEC
T ss_pred CcCcccccccccchhHHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcCCCEEEEC
Confidence 0 0122233333432 235788888 5999999999999999999874
No 213
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=96.83 E-value=0.011 Score=55.33 Aligned_cols=112 Identities=21% Similarity=0.264 Sum_probs=75.3
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeeeec--C
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVDES--E 122 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~~~--~ 122 (310)
.+.++.+.++|++.| .++ . -.|.. ....+.++++++.+++|++++.. .+.+.++.+.++|||+|... .
T Consensus 107 ~e~a~~l~eaGad~I-~ld-----~--a~G~~-~~~~~~i~~i~~~~~~~Vivg~v-~t~e~A~~l~~aGaD~I~VG~~~ 176 (361)
T 3khj_A 107 IERAKLLVEAGVDVI-VLD-----S--AHGHS-LNIIRTLKEIKSKMNIDVIVGNV-VTEEATKELIENGADGIKVGIGP 176 (361)
T ss_dssp HHHHHHHHHTTCSEE-EEC-----C--SCCSB-HHHHHHHHHHHHHCCCEEEEEEE-CSHHHHHHHHHTTCSEEEECSSC
T ss_pred HHHHHHHHHcCcCeE-EEe-----C--CCCCc-HHHHHHHHHHHHhcCCcEEEccC-CCHHHHHHHHHcCcCEEEEecCC
Confidence 788999999999988 442 1 01110 00146778888888999987433 34578889999999998731 0
Q ss_pred ------------CCChhHHHHHHHh--cCCCCcEEe--ecCCHHHHHHHHHhCCCEEEEe
Q 037779 123 ------------VLTPADEENHINK--HNFRVPFVC--GCRNLGESLRRIREGAAMIRTK 166 (310)
Q Consensus 123 ------------~~~~~~~~~~~~~--~~~~l~v~~--~v~t~~ea~~a~~~Gad~I~v~ 166 (310)
..+....+..+.+ ...++++++ ++.+..++.+++.+|||.|.+.
T Consensus 177 Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~vG 236 (361)
T 3khj_A 177 GSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMIG 236 (361)
T ss_dssp CTTCCHHHHTCBCCCHHHHHHHHHHHHHHHTCCEEEESCCCSHHHHHHHHHHTCSEEEES
T ss_pred CcCCCcccccCCCCCcHHHHHHHHHHHhhcCCeEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 0122223333322 123578888 5999999999999999999875
No 214
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=96.80 E-value=0.017 Score=56.23 Aligned_cols=112 Identities=17% Similarity=0.208 Sum_probs=77.1
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhc-CcceEeeccccchHHHHHHHHcCCCeeeec--
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSV-TIPVMAKARIGHFVEAQILEAIGVDYVDES-- 121 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~-~lPv~~kd~i~~~~~~~~~~~aGad~v~~~-- 121 (310)
.+.++.+.++|++.| .++ .. .|.. ....+.++++++.+ ++|+++.+. .+.+.++.+.++|||+|...
T Consensus 231 ~~~a~~l~~aG~d~I-~id-----~a--~g~~-~~~~~~v~~i~~~~p~~~Vi~g~v-~t~e~a~~l~~aGaD~I~vg~g 300 (490)
T 4avf_A 231 GERVAALVAAGVDVV-VVD-----TA--HGHS-KGVIERVRWVKQTFPDVQVIGGNI-ATAEAAKALAEAGADAVKVGIG 300 (490)
T ss_dssp HHHHHHHHHTTCSEE-EEE-----CS--CCSB-HHHHHHHHHHHHHCTTSEEEEEEE-CSHHHHHHHHHTTCSEEEECSS
T ss_pred HHHHHHHhhcccceE-Eec-----cc--CCcc-hhHHHHHHHHHHHCCCceEEEeee-CcHHHHHHHHHcCCCEEEECCC
Confidence 578999999999988 442 11 1110 11157888999887 889988543 34578889999999999731
Q ss_pred ---C-------C--CChhHHHHHHHh--cCCCCcEEe--ecCCHHHHHHHHHhCCCEEEEe
Q 037779 122 ---E-------V--LTPADEENHINK--HNFRVPFVC--GCRNLGESLRRIREGAAMIRTK 166 (310)
Q Consensus 122 ---~-------~--~~~~~~~~~~~~--~~~~l~v~~--~v~t~~ea~~a~~~Gad~I~v~ 166 (310)
. . .+....+..+.+ +..++++++ ++.+..++.+++.+||+.+.+.
T Consensus 301 ~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal~~GAd~V~vG 361 (490)
T 4avf_A 301 PGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDLAKAMVAGAYCVMMG 361 (490)
T ss_dssp CSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHHHTCSEEEEC
T ss_pred CCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHHHcCCCeeeec
Confidence 1 0 112222333333 235788888 6999999999999999999885
No 215
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=96.65 E-value=0.0075 Score=53.98 Aligned_cols=26 Identities=27% Similarity=0.359 Sum_probs=22.3
Q ss_pred CCCCEEEEccCCCCCHHHHHHHHHcCCC
Q 037779 220 GRLPVVHFAAGGVATPADAAMMMQLGCD 247 (310)
Q Consensus 220 ~~iPVv~ia~GGI~t~~di~~~~~~Gad 247 (310)
.+++| -++|||.|.+++.+++++|++
T Consensus 197 ~~v~V--KaaGGIrt~~~al~~i~aga~ 222 (260)
T 1p1x_A 197 KTVGF--KPAGGVRTAEDAQKYLAIADE 222 (260)
T ss_dssp TTCEE--ECBSSCCSHHHHHHHHHHHHH
T ss_pred CCceE--EEeCCCCCHHHHHHHHHhhhh
Confidence 35788 579999999999999999765
No 216
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=96.65 E-value=0.022 Score=55.67 Aligned_cols=113 Identities=17% Similarity=0.268 Sum_probs=76.4
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhc-CcceEeeccccchHHHHHHHHcCCCeeeecC-
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSV-TIPVMAKARIGHFVEAQILEAIGVDYVDESE- 122 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~-~lPv~~kd~i~~~~~~~~~~~aGad~v~~~~- 122 (310)
.+.++.+.++|++.|. ++ ...|.. ....+.++.+++.+ ++||+++.. .+.+.++.+.++|||+|....
T Consensus 257 ~~~a~~~~~aG~d~v~-i~-------~~~G~~-~~~~~~i~~i~~~~~~~pvi~~~v-~t~~~a~~l~~aGad~I~vg~~ 326 (514)
T 1jcn_A 257 KYRLDLLTQAGVDVIV-LD-------SSQGNS-VYQIAMVHYIKQKYPHLQVIGGNV-VTAAQAKNLIDAGVDGLRVGMG 326 (514)
T ss_dssp HHHHHHHHHTTCSEEE-EC-------CSCCCS-HHHHHHHHHHHHHCTTCEEEEEEE-CSHHHHHHHHHHTCSEEEECSS
T ss_pred HHHHHHHHHcCCCEEE-ee-------ccCCcc-hhHHHHHHHHHHhCCCCceEeccc-chHHHHHHHHHcCCCEEEECCC
Confidence 4778999999999983 31 111220 01147789999988 899988643 345778899999999986311
Q ss_pred -------------CCChhHHHHHHHh--cCCCCcEEe--ecCCHHHHHHHHHhCCCEEEEec
Q 037779 123 -------------VLTPADEENHINK--HNFRVPFVC--GCRNLGESLRRIREGAAMIRTKG 167 (310)
Q Consensus 123 -------------~~~~~~~~~~~~~--~~~~l~v~~--~v~t~~ea~~a~~~Gad~I~v~g 167 (310)
..+.......+.+ ...++++++ ++.+..++.+++.+|||.+.+..
T Consensus 327 ~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~~ipVia~GGI~~~~di~kala~GAd~V~iG~ 388 (514)
T 1jcn_A 327 CGSICITQEVMACGRPQGTAVYKVAEYARRFGVPIIADGGIQTVGHVVKALALGASTVMMGS 388 (514)
T ss_dssp CSCCBTTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEEST
T ss_pred CCcccccccccCCCccchhHHHHHHHHHhhCCCCEEEECCCCCHHHHHHHHHcCCCeeeECH
Confidence 1111212222222 224688888 69999999999999999999863
No 217
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=96.65 E-value=0.022 Score=51.64 Aligned_cols=118 Identities=19% Similarity=0.251 Sum_probs=74.2
Q ss_pred HHHHHHHH-cCCcEEEecc-cccchh---hhcCCCCCCCChHHHHHHHhhcCcceEeecccc--c-hHHHHHHHHcCCCe
Q 037779 46 EQARIAEE-AGACAVMALE-RVPADI---RAQGGVARMSDPQLIKQIKSSVTIPVMAKARIG--H-FVEAQILEAIGVDY 117 (310)
Q Consensus 46 ~~a~~~~~-~Ga~~I~~l~-~~~~d~---r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~--~-~~~~~~~~~aGad~ 117 (310)
+.++.+.+ +|+++| .+| .+|... ..+++. .....+.++++++.+++||++|...+ + .+.++.+.++|+|+
T Consensus 115 ~~a~~~~~~~g~d~i-ei~~~~p~~~~g~~~~g~~-~~~~~eii~~v~~~~~~pv~vk~~~~~~~~~~~a~~l~~~G~d~ 192 (311)
T 1ep3_A 115 AVCAKIGDAANVKAI-ELNISCPNVKHGGQAFGTD-PEVAAALVKACKAVSKVPLYVKLSPNVTDIVPIAKAVEAAGADG 192 (311)
T ss_dssp HHHHHHTTSTTEEEE-EEECCSEEGGGTTEEGGGC-HHHHHHHHHHHHHHCSSCEEEEECSCSSCSHHHHHHHHHTTCSE
T ss_pred HHHHHHhccCCCCEE-EEeCCCCCCCCchhhhcCC-HHHHHHHHHHHHHhcCCCEEEEECCChHHHHHHHHHHHHcCCCE
Confidence 45666666 899988 566 333210 111111 00014566777877899999985433 2 24478889999999
Q ss_pred eeecC--------C--C-----------C-h------hHHHHHHHhcCCCCcEEe--ecCCHHHHHHHHHhCCCEEEEe
Q 037779 118 VDESE--------V--L-----------T-P------ADEENHINKHNFRVPFVC--GCRNLGESLRRIREGAAMIRTK 166 (310)
Q Consensus 118 v~~~~--------~--~-----------~-~------~~~~~~~~~~~~~l~v~~--~v~t~~ea~~a~~~Gad~I~v~ 166 (310)
|+.+. . . + + .++++.+++. .++++++ +++|.+++.++++.|||.|.+.
T Consensus 193 i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~-~~ipvia~GGI~~~~d~~~~l~~GAd~V~vg 270 (311)
T 1ep3_A 193 LTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQD-VDIPIIGMGGVANAQDVLEMYMAGASAVAVG 270 (311)
T ss_dssp EEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTT-CSSCEEECSSCCSHHHHHHHHHHTCSEEEEC
T ss_pred EEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHh-cCCCEEEECCcCCHHHHHHHHHcCCCEEEEC
Confidence 88521 1 0 0 1 1344444442 4677776 4899999999999999999885
No 218
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=96.63 E-value=0.028 Score=54.64 Aligned_cols=112 Identities=18% Similarity=0.259 Sum_probs=77.4
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhc-CcceEeeccccchHHHHHHHHcCCCeeeecC-
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSV-TIPVMAKARIGHFVEAQILEAIGVDYVDESE- 122 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~-~lPv~~kd~i~~~~~~~~~~~aGad~v~~~~- 122 (310)
.+.++.+.++|++.+. ++ ...|. .....+.++.+++.+ ++||+++.. .+.+.++.+.++|+|+|....
T Consensus 239 ~~~a~~l~~aGvd~v~-i~-------~~~G~-~~~~~e~i~~i~~~~p~~pvi~g~~-~t~e~a~~l~~~G~d~I~v~~~ 308 (494)
T 1vrd_A 239 MERVEKLVKAGVDVIV-ID-------TAHGH-SRRVIETLEMIKADYPDLPVVAGNV-ATPEGTEALIKAGADAVKVGVG 308 (494)
T ss_dssp HHHHHHHHHTTCSEEE-EC-------CSCCS-SHHHHHHHHHHHHHCTTSCEEEEEE-CSHHHHHHHHHTTCSEEEECSS
T ss_pred HHHHHHHHHhCCCEEE-EE-------ecCCc-hHHHHHHHHHHHHHCCCceEEeCCc-CCHHHHHHHHHcCCCEEEEcCC
Confidence 4789999999999984 31 11121 011267888999888 799988643 345778899999999997421
Q ss_pred -------------CCChhHHHHHHHh--cCCCCcEEe--ecCCHHHHHHHHHhCCCEEEEe
Q 037779 123 -------------VLTPADEENHINK--HNFRVPFVC--GCRNLGESLRRIREGAAMIRTK 166 (310)
Q Consensus 123 -------------~~~~~~~~~~~~~--~~~~l~v~~--~v~t~~ea~~a~~~Gad~I~v~ 166 (310)
..+.......+.+ ...++++++ ++.+..++.+++.+|||.+.+.
T Consensus 309 ~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipvia~GGI~~~~di~kala~GAd~V~iG 369 (494)
T 1vrd_A 309 PGSICTTRVVAGVGVPQLTAVMECSEVARKYDVPIIADGGIRYSGDIVKALAAGAESVMVG 369 (494)
T ss_dssp CSTTCHHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred CCccccccccCCCCccHHHHHHHHHHHHhhcCCCEEEECCcCCHHHHHHHHHcCCCEEEEC
Confidence 1122233333332 234688888 6999999999999999999875
No 219
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=96.62 E-value=0.013 Score=52.13 Aligned_cols=71 Identities=30% Similarity=0.404 Sum_probs=56.7
Q ss_pred CCHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeee
Q 037779 43 VTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVD 119 (310)
Q Consensus 43 ~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~ 119 (310)
.++..++++++.|+++++.+ +..+ ..| .-..++++|+.+++..++||++..+|++.+++..+.++|+|.|+
T Consensus 144 dd~~~akrl~~~G~~aVmPl---g~pI--GsG-~Gi~~~~lI~~I~e~~~vPVI~eGGI~TPsDAa~AmeLGAdgVl 214 (265)
T 1wv2_A 144 DDPIIARQLAEIGCIAVMPL---AGLI--GSG-LGICNPYNLRIILEEAKVPVLVDAGVGTASDAAIAMELGCEAVL 214 (265)
T ss_dssp SCHHHHHHHHHSCCSEEEEC---SSST--TCC-CCCSCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHHTCSEEE
T ss_pred CCHHHHHHHHHhCCCEEEeC---CccC--CCC-CCcCCHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHHHcCCCEEE
Confidence 45899999999999998644 1111 112 12456999999999999999999999988899999999999988
No 220
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=96.58 E-value=0.097 Score=45.25 Aligned_cols=124 Identities=19% Similarity=0.223 Sum_probs=79.1
Q ss_pred HHHHHHhhcCcceEeeccccc-hHHHHHHHHcCCCeeeec-CCCChhHHHHHHHhcCCCCcEEee-cCCHHHHHHHHHhC
Q 037779 83 LIKQIKSSVTIPVMAKARIGH-FVEAQILEAIGVDYVDES-EVLTPADEENHINKHNFRVPFVCG-CRNLGESLRRIREG 159 (310)
Q Consensus 83 ~i~~i~~~~~lPv~~kd~i~~-~~~~~~~~~aGad~v~~~-~~~~~~~~~~~~~~~~~~l~v~~~-v~t~~ea~~a~~~G 159 (310)
.+..+++.-=+||+....... .+.++.+.+.|++.+-.. ......+.++.+.++..++.+.++ +.+.++++.+.+.|
T Consensus 9 ~~~~l~~~~~i~v~r~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~~~vgagtvi~~d~~~~A~~aG 88 (214)
T 1wbh_A 9 AESILTTGPVVPVIVVKKLEHAVPMAKALVAGGVRVLNVTLRTECAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAG 88 (214)
T ss_dssp HHHHHHSCSEEEEECCSSGGGHHHHHHHHHHTTCCEEEEESCSTTHHHHHHHHHHHCTTSEEEEESCCSHHHHHHHHHHT
T ss_pred HHHHHHHCCEEEEEECCCHHHHHHHHHHHHHcCCCEEEEeCCChhHHHHHHHHHHHCcCCEEeeCEEEEHHHHHHHHHcC
Confidence 444454333356655533332 245678888999998643 222344566656554456666554 56778999999999
Q ss_pred CCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHH
Q 037779 160 AAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAA 239 (310)
Q Consensus 160 ad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~ 239 (310)
||++...+ . +.+..+..++ ..+|++ + |++|++++.
T Consensus 89 Ad~v~~p~--~--------------------------------------d~~v~~~~~~-~g~~~i-~---G~~t~~e~~ 123 (214)
T 1wbh_A 89 AQFAISPG--L--------------------------------------TEPLLKAATE-GTIPLI-P---GISTVSELM 123 (214)
T ss_dssp CSCEEESS--C--------------------------------------CHHHHHHHHH-SSSCEE-E---EESSHHHHH
T ss_pred CCEEEcCC--C--------------------------------------CHHHHHHHHH-hCCCEE-E---ecCCHHHHH
Confidence 99886421 0 1223333333 346774 2 499999999
Q ss_pred HHHHcCCCEEEE
Q 037779 240 MMMQLGCDGVFV 251 (310)
Q Consensus 240 ~~~~~GadgV~V 251 (310)
++.++|+|.|.+
T Consensus 124 ~A~~~Gad~v~~ 135 (214)
T 1wbh_A 124 LGMDYGLKEFKF 135 (214)
T ss_dssp HHHHTTCCEEEE
T ss_pred HHHHCCCCEEEE
Confidence 999999999998
No 221
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=96.56 E-value=0.009 Score=54.00 Aligned_cols=26 Identities=15% Similarity=0.305 Sum_probs=22.1
Q ss_pred CCCCEEEEccCCCCCHHHHHHHHHcCCC
Q 037779 220 GRLPVVHFAAGGVATPADAAMMMQLGCD 247 (310)
Q Consensus 220 ~~iPVv~ia~GGI~t~~di~~~~~~Gad 247 (310)
.+++| -++|||.|.+++.+++++|++
T Consensus 224 ~~vgV--KaaGGIrt~e~al~~i~aga~ 249 (281)
T 2a4a_A 224 NKIGL--KVSGGISDLNTASHYILLARR 249 (281)
T ss_dssp TCCEE--EEESSCCSHHHHHHHHHHHHH
T ss_pred CCceE--EEeCCCCCHHHHHHHHHHhhh
Confidence 35788 468999999999999998776
No 222
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=96.55 E-value=0.024 Score=49.64 Aligned_cols=32 Identities=31% Similarity=0.380 Sum_probs=26.4
Q ss_pred CCCEEEEccCCCCCHHHHHHHHHc---CCC----EEEEccc
Q 037779 221 RLPVVHFAAGGVATPADAAMMMQL---GCD----GVFVGSG 254 (310)
Q Consensus 221 ~iPVv~ia~GGI~t~~di~~~~~~---Gad----gV~VGsa 254 (310)
++|| -++|||.|.+++.+++++ |++ -+-..+.
T Consensus 184 ~v~v--KaaGGirt~~~al~~i~a~~~Ga~~~~fRiGtS~~ 222 (226)
T 1vcv_A 184 RLGV--KMAGGIRTREQAKAIVDAIGWGEDPARVRLGTSTP 222 (226)
T ss_dssp CCEE--EEESSCCSHHHHHHHHHHHCSCSCTTTEEEEESCG
T ss_pred CceE--EEeCCCCCHHHHHHHHHHHHCCCCcCCceEecCch
Confidence 5788 468999999999999999 999 6655543
No 223
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=96.55 E-value=0.02 Score=53.42 Aligned_cols=87 Identities=15% Similarity=0.106 Sum_probs=65.0
Q ss_pred CChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeeeec-------C-CCChhHHHHHHHh-cCCCCcEEee--cC
Q 037779 79 SDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVDES-------E-VLTPADEENHINK-HNFRVPFVCG--CR 147 (310)
Q Consensus 79 ~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~~~-------~-~~~~~~~~~~~~~-~~~~l~v~~~--v~ 147 (310)
...+.++.+++.+++||++|... +.+.++.+.++|+|+|..+ + ..+..+.+..+.+ .+..++++++ ++
T Consensus 204 ~~w~~i~~lr~~~~~PvivK~v~-~~e~A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~~ipVia~GGI~ 282 (352)
T 3sgz_A 204 FCWNDLSLLQSITRLPIILKGIL-TKEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVR 282 (352)
T ss_dssp CCHHHHHHHHHHCCSCEEEEEEC-SHHHHHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTTSSEEEEESSCC
T ss_pred CCHHHHHHHHHhcCCCEEEEecC-cHHHHHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHhCCCCeEEEECCCC
Confidence 34678999999999999999764 4478899999999998731 1 1122344444433 2335777774 99
Q ss_pred CHHHHHHHHHhCCCEEEEe
Q 037779 148 NLGESLRRIREGAAMIRTK 166 (310)
Q Consensus 148 t~~ea~~a~~~Gad~I~v~ 166 (310)
+..++.+++.+||+.|.+.
T Consensus 283 ~g~Dv~kaLalGA~aV~iG 301 (352)
T 3sgz_A 283 TGTDVLKALALGARCIFLG 301 (352)
T ss_dssp SHHHHHHHHHTTCSEEEES
T ss_pred CHHHHHHHHHcCCCEEEEC
Confidence 9999999999999999985
No 224
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=96.50 E-value=0.022 Score=52.71 Aligned_cols=45 Identities=18% Similarity=0.401 Sum_probs=32.7
Q ss_pred HHHHHhcCCCCEEEEccCCCCCHHHH----HHHHHcCC--CEEEEccccccCC
Q 037779 213 VMQTKQLGRLPVVHFAAGGVATPADA----AMMMQLGC--DGVFVGSGVFKSG 259 (310)
Q Consensus 213 ~~~i~~~~~iPVv~ia~GGI~t~~di----~~~~~~Ga--dgV~VGsai~~~~ 259 (310)
.+.+.+.+++|+| +.+||.+ .++. +.++++|+ .||++|+++++..
T Consensus 237 f~~~~~a~~~P~v-~lsgG~~-~~~fl~~v~~A~~aGa~f~Gv~~GRnvwq~~ 287 (332)
T 3iv3_A 237 FREQEASTDLPYI-YLSAGVS-AELFQETLVFAHKAGAKFNGVLCGRATWAGS 287 (332)
T ss_dssp HHHHHHTCSSCEE-EECTTCC-HHHHHHHHHHHHHHTCCCCEEEECHHHHTTH
T ss_pred HHHHHhcCCCCEE-EECCCCC-HHHHHHHHHHHHHcCCCcceEEeeHHHHHhh
Confidence 3444455789986 3589984 5443 45567899 9999999999963
No 225
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=96.49 E-value=0.027 Score=50.70 Aligned_cols=84 Identities=13% Similarity=0.182 Sum_probs=61.0
Q ss_pred cHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHcCC--------Chhh
Q 037779 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTNYS--------DPDV 280 (310)
Q Consensus 209 ~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~~~--------~~~~ 280 (310)
..+.++.+++..++||+ .-.+|.++.++.++..+|||+|+++.+.+. ...+++|.+..+... ++.-
T Consensus 108 s~~~L~~ir~~v~lPVl--~Kdfi~d~~qi~ea~~~GAD~VlLi~a~L~----~~~l~~l~~~a~~lGl~~lvevh~~eE 181 (272)
T 3tsm_A 108 APEFLTAARQACSLPAL--RKDFLFDPYQVYEARSWGADCILIIMASVD----DDLAKELEDTAFALGMDALIEVHDEAE 181 (272)
T ss_dssp CHHHHHHHHHTSSSCEE--EESCCCSTHHHHHHHHTTCSEEEEETTTSC----HHHHHHHHHHHHHTTCEEEEEECSHHH
T ss_pred CHHHHHHHHHhcCCCEE--ECCccCCHHHHHHHHHcCCCEEEEcccccC----HHHHHHHHHHHHHcCCeEEEEeCCHHH
Confidence 45667778877889995 467788899999999999999999998774 245666666655542 2222
Q ss_pred HHhhhhccCCceecccccc
Q 037779 281 LAEVSCGLGEAMVGIDLND 299 (310)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~ 299 (310)
.+.+...|.++.|+.-.|
T Consensus 182 -l~~A~~~ga~iIGinnr~ 199 (272)
T 3tsm_A 182 -MERALKLSSRLLGVNNRN 199 (272)
T ss_dssp -HHHHTTSCCSEEEEECBC
T ss_pred -HHHHHhcCCCEEEECCCC
Confidence 244557799999987544
No 226
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=96.47 E-value=0.25 Score=45.15 Aligned_cols=195 Identities=15% Similarity=0.104 Sum_probs=105.5
Q ss_pred cCCCccccccceeeecC-C-c--cccCCCHHHHHHHHHcCCcEEEecccccch-hh-hcCCC--CCCCCh----HHHHHH
Q 037779 20 KKSPFSVKVGLAQMLRG-G-V--IMDVVTPEQARIAEEAGACAVMALERVPAD-IR-AQGGV--ARMSDP----QLIKQI 87 (310)
Q Consensus 20 ~~sp~~~~~~~~~~l~~-g-~--i~~~~~~~~a~~~~~~Ga~~I~~l~~~~~d-~r-~~~G~--~~~~~~----~~i~~i 87 (310)
+.||+.....+.++|.. | . +..+.|.-.|+.++++|+++|-.-- + .- ...|- ..+-.. ..++.|
T Consensus 6 ~~~~~~~a~~lr~ll~~~~~~i~~~~a~D~~sA~l~e~aGf~ai~vsG----~~~a~s~~G~pD~~~vt~~em~~~~~~i 81 (307)
T 3lye_A 6 EDEPFSGAKKLRHLLENTDELIVCPGVYDGLSARTAMELGFKSLYMTG----AGTTASRLGQPDLAIAQLHDMRDNADMI 81 (307)
T ss_dssp --CTTCHHHHHHHHHHHCCCCEEEEEECSHHHHHHHHHTTCSCEEECH----HHHHHHHHCCCSSSCSCHHHHHHHHHHH
T ss_pred CCCchhHHHHHHHHHhCCCCeEEEecCcCHHHHHHHHHcCCCEEEecc----HHHHHHhcCCCCCCCCCHHHHHHHHHhh
Confidence 35565555566666754 3 2 2356778899999999999973200 0 00 00111 111112 244566
Q ss_pred Hhhc--CcceEeeccc--cch----HHHHHHHHcCCCeeeecCC--------------CChhHHHHHHHh-------cCC
Q 037779 88 KSSV--TIPVMAKARI--GHF----VEAQILEAIGVDYVDESEV--------------LTPADEENHINK-------HNF 138 (310)
Q Consensus 88 ~~~~--~lPv~~kd~i--~~~----~~~~~~~~aGad~v~~~~~--------------~~~~~~~~~~~~-------~~~ 138 (310)
++.+ ++||++..-. +.. ..+..+.++||..|.+-+. .+..+....++. .+.
T Consensus 82 ~r~~~~~~PviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~ 161 (307)
T 3lye_A 82 ANLDPFGPPLIADMDTGYGGPIMVARTVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRS 161 (307)
T ss_dssp HTSSTTSCCEEEECTTCSSSHHHHHHHHHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTTC
T ss_pred hccCCCCCcEEEECCCCCCCHHHHHHHHHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCC
Confidence 6655 4999885322 222 3456777899999983222 233344444422 134
Q ss_pred CCcEEeecCCH-----HHH----HHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCc
Q 037779 139 RVPFVCGCRNL-----GES----LRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAP 209 (310)
Q Consensus 139 ~l~v~~~v~t~-----~ea----~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~ 209 (310)
++.+.+-+... +|+ +...++|||.|.+.+. .+
T Consensus 162 d~~I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~ifi~~~---------------------------------------~~ 202 (307)
T 3lye_A 162 DFVLIARTDALQSLGYEECIERLRAARDEGADVGLLEGF---------------------------------------RS 202 (307)
T ss_dssp CCEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEEEECCC---------------------------------------SC
T ss_pred CeEEEEechhhhccCHHHHHHHHHHHHHCCCCEEEecCC---------------------------------------CC
Confidence 55555555442 222 2234577777777532 02
Q ss_pred HHHHHHHHhcC-CCCEEE-EccCCCCCH-HHHHHHHHcCCCEEEEccccccC
Q 037779 210 YDLVMQTKQLG-RLPVVH-FAAGGVATP-ADAAMMMQLGCDGVFVGSGVFKS 258 (310)
Q Consensus 210 ~~l~~~i~~~~-~iPVv~-ia~GGI~t~-~di~~~~~~GadgV~VGsai~~~ 258 (310)
.+.++.+.+.. ++|+++ +..+|- +| -...++.++|+.-|+.+..++++
T Consensus 203 ~~~~~~i~~~~~~~Pv~~n~~~~g~-~p~~t~~eL~~lGv~~v~~~~~~~ra 253 (307)
T 3lye_A 203 KEQAAAAVAALAPWPLLLNSVENGH-SPLITVEEAKAMGFRIMIFSFATLAP 253 (307)
T ss_dssp HHHHHHHHHHHTTSCBEEEEETTSS-SCCCCHHHHHHHTCSEEEEETTTHHH
T ss_pred HHHHHHHHHHccCCceeEEeecCCC-CCCCCHHHHHHcCCeEEEEChHHHHH
Confidence 22333443332 367743 235653 23 35788889999999999987763
No 227
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=96.45 E-value=0.35 Score=44.08 Aligned_cols=196 Identities=17% Similarity=0.132 Sum_probs=115.6
Q ss_pred HHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEee-ccccchHHHHHHHHcCCCeeeec-CCC
Q 037779 47 QARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAK-ARIGHFVEAQILEAIGVDYVDES-EVL 124 (310)
Q Consensus 47 ~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~k-d~i~~~~~~~~~~~aGad~v~~~-~~~ 124 (310)
..+++++.++..|.++- +... .+.|... ....++...+ .++||.++ |.-.+++.+..+.++|-+.|-++ +.+
T Consensus 33 il~AAee~~sPvIlq~s--~g~~-~y~g~~~--~~~~v~~~a~-~~VPValHlDHg~~~e~~~~ai~~GFtSVMiDgS~~ 106 (305)
T 1rvg_A 33 VLEAAEEQRSPVILALS--EGAM-KYGGRAL--TLMAVELAKE-ARVPVAVHLDHGSSYESVLRALRAGFTSVMIDKSHE 106 (305)
T ss_dssp HHHHHHHTTCCEEEEEE--HHHH-HHHHHHH--HHHHHHHHHH-CSSCEEEEEEEECSHHHHHHHHHTTCSEEEECCTTS
T ss_pred HHHHHHHhCCCEEEECC--hhHH-hhCCHHH--HHHHHHHHHh-CCCcEEEECCCCCCHHHHHHHHHcCCCeeeeCCCCC
Confidence 46777778888875551 1111 2222100 0234455555 89999886 44335677888888999998633 223
Q ss_pred Chh-------HHHHHHHhcCCCC----------c----EEe---ecCCHHHHHHHH-HhCCCEEEEe-cCCCCCchHHHH
Q 037779 125 TPA-------DEENHINKHNFRV----------P----FVC---GCRNLGESLRRI-REGAAMIRTK-GEAGTGNIVEAV 178 (310)
Q Consensus 125 ~~~-------~~~~~~~~~~~~l----------~----v~~---~v~t~~ea~~a~-~~Gad~I~v~-g~~~~~~~~~~~ 178 (310)
+.+ ++.+..++.+..+ . ... -.++++|+.+.. +.|+|.+.+. |..++..
T Consensus 107 p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg~Ed~~~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~HG~Y----- 181 (305)
T 1rvg_A 107 DFETNVRETRRVVEAAHAVGVTVEAELGRLAGIEEHVAVDEKDALLTNPEEARIFMERTGADYLAVAIGTSHGAY----- 181 (305)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCSCC------CCTTCCCHHHHHHHHHHHCCSEEEECSSCCSSSB-----
T ss_pred CHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCccCCccccccccccCCHHHHHHHHHHHCCCEEEEecCcccccc-----
Confidence 333 3334444333211 1 000 025688888766 5799988765 4433211
Q ss_pred HHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccC---------------------CCCCHHH
Q 037779 179 RHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAG---------------------GVATPAD 237 (310)
Q Consensus 179 ~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~G---------------------GI~t~~d 237 (310)
+. +. ...-++++++.+.+..++|+|.=-++ |+ ..++
T Consensus 182 -------------k~-~g--------~p~L~~~~L~~I~~~~~vpLVlHGgSsv~~~~~~~~~~~gg~~~~~~G~-p~e~ 238 (305)
T 1rvg_A 182 -------------KG-KG--------RPFIDHARLERIARLVPAPLVLHGASAVPPELVERFRASGGEIGEAAGI-HPED 238 (305)
T ss_dssp -------------CS-SS--------SCCCCHHHHHHHHHHCCSCEEECSCCCCCHHHHHHHHHTTCCCCSCBCC-CHHH
T ss_pred -------------CC-CC--------CCccCHHHHHHHHHhcCCCEEEeCCCCCcHHHHHHHHhhccccccCCCC-CHHH
Confidence 10 00 01226888888888778998765555 77 4799
Q ss_pred HHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHcC---CChhhH
Q 037779 238 AAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTNY---SDPDVL 281 (310)
Q Consensus 238 i~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~~---~~~~~~ 281 (310)
+++++++|..-|=++|.+-. .+.+.+++.+.+. .+|+.+
T Consensus 239 i~~ai~~GV~KiNi~Tdl~~-----A~~~~vr~~~~~~~~~~dpr~~ 280 (305)
T 1rvg_A 239 IKKAISLGIAKINTDTDLRL-----AFTALIREALNKNPKEFDPRKY 280 (305)
T ss_dssp HHHHHHTTEEEEEECHHHHH-----HHHHHHHHHHHHCTTCCCTHHH
T ss_pred HHHHHHCCCeEEEEChHHHH-----HHHHHHHHHHHhCccccChHHH
Confidence 99999999999999997754 3444555555443 357654
No 228
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=96.42 E-value=0.04 Score=51.71 Aligned_cols=124 Identities=15% Similarity=0.195 Sum_probs=75.3
Q ss_pred cCcceEee--ccccchHHHHHHHHcCCCeeeecCCCChhHHHHHHHh-cCC-CCcEEeec----CCHHHHHHHHHhCCCE
Q 037779 91 VTIPVMAK--ARIGHFVEAQILEAIGVDYVDESEVLTPADEENHINK-HNF-RVPFVCGC----RNLGESLRRIREGAAM 162 (310)
Q Consensus 91 ~~lPv~~k--d~i~~~~~~~~~~~aGad~v~~~~~~~~~~~~~~~~~-~~~-~l~v~~~v----~t~~ea~~a~~~Gad~ 162 (310)
.++|++.. +.+...+.+..+..+|.=.++. ..++++++.+.+++ +.. .+.+.+.+ .+.+.+..+.+.|+|+
T Consensus 45 l~~Pii~apM~~vs~~~lA~avA~aGGlg~i~-~~~s~e~~~~~i~~vk~~~~l~vga~vg~~~~~~~~~~~lieaGvd~ 123 (366)
T 4fo4_A 45 LNIPMVSASMDTVTEARLAIALAQEGGIGFIH-KNMSIEQQAAQVHQVKISGGLRVGAAVGAAPGNEERVKALVEAGVDV 123 (366)
T ss_dssp ESSSEEECCCTTTCSHHHHHHHHHTTCEEEEC-SSSCHHHHHHHHHHHHTTTSCCCEEECCSCTTCHHHHHHHHHTTCSE
T ss_pred cCCCEEeCCCCCCChHHHHHHHHHcCCceEee-cCCCHHHHHHHHHHHHhcCceeEEEEeccChhHHHHHHHHHhCCCCE
Confidence 46797664 3333444554555566544432 33577776666654 221 23333322 4567788888999999
Q ss_pred EEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcC-CCCEEEEccCCCCCHHHHHHH
Q 037779 163 IRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLG-RLPVVHFAAGGVATPADAAMM 241 (310)
Q Consensus 163 I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~-~iPVv~ia~GGI~t~~di~~~ 241 (310)
|.++.....+ ....+.++.+++.. ++||+ .|.+.|+++++++
T Consensus 124 I~idta~G~~----------------------------------~~~~~~I~~ik~~~p~v~Vi---~G~v~t~e~A~~a 166 (366)
T 4fo4_A 124 LLIDSSHGHS----------------------------------EGVLQRIRETRAAYPHLEII---GGNVATAEGARAL 166 (366)
T ss_dssp EEEECSCTTS----------------------------------HHHHHHHHHHHHHCTTCEEE---EEEECSHHHHHHH
T ss_pred EEEeCCCCCC----------------------------------HHHHHHHHHHHHhcCCCceE---eeeeCCHHHHHHH
Confidence 9875221100 00134456666543 67774 2678899999999
Q ss_pred HHcCCCEEEEc
Q 037779 242 MQLGCDGVFVG 252 (310)
Q Consensus 242 ~~~GadgV~VG 252 (310)
.++|||+|.+|
T Consensus 167 ~~aGAD~I~vG 177 (366)
T 4fo4_A 167 IEAGVSAVKVG 177 (366)
T ss_dssp HHHTCSEEEEC
T ss_pred HHcCCCEEEEe
Confidence 99999999995
No 229
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=96.36 E-value=0.072 Score=46.47 Aligned_cols=123 Identities=17% Similarity=0.179 Sum_probs=77.9
Q ss_pred HHHHHhhcCcceEeeccccc-hHHHHHHHHcCCCeeeecCC-CChhHHHHHHHhcCCCCcEEee-cCCHHHHHHHHHhCC
Q 037779 84 IKQIKSSVTIPVMAKARIGH-FVEAQILEAIGVDYVDESEV-LTPADEENHINKHNFRVPFVCG-CRNLGESLRRIREGA 160 (310)
Q Consensus 84 i~~i~~~~~lPv~~kd~i~~-~~~~~~~~~aGad~v~~~~~-~~~~~~~~~~~~~~~~l~v~~~-v~t~~ea~~a~~~Ga 160 (310)
+..+++.-=+||+....... .+.++.+.+.|++.+-...- ....+.++.+.+..+++.+.++ +.+.+++..+.+.||
T Consensus 20 ~~~l~~~~ii~V~r~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~~~igagtvl~~d~~~~A~~aGA 99 (225)
T 1mxs_A 20 DAICEKARILPVITIAREEDILPLADALAAGGIRTLEVTLRSQHGLKAIQVLREQRPELCVGAGTVLDRSMFAAVEAAGA 99 (225)
T ss_dssp HHHHHHHSEEEEECCSCGGGHHHHHHHHHHTTCCEEEEESSSTHHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTC
T ss_pred HHHHHHCCEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEecCCccHHHHHHHHHHhCcccEEeeCeEeeHHHHHHHHHCCC
Confidence 34444333356665543332 24567888899999864321 2234555655554456776664 557789999999999
Q ss_pred CEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHH
Q 037779 161 AMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAM 240 (310)
Q Consensus 161 d~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~ 240 (310)
|++...+ . +.+..+..++ ..+|++ -|++|++++.+
T Consensus 100 d~v~~p~--~--------------------------------------d~~v~~~~~~-~g~~~i----~G~~t~~e~~~ 134 (225)
T 1mxs_A 100 QFVVTPG--I--------------------------------------TEDILEAGVD-SEIPLL----PGISTPSEIMM 134 (225)
T ss_dssp SSEECSS--C--------------------------------------CHHHHHHHHH-CSSCEE----CEECSHHHHHH
T ss_pred CEEEeCC--C--------------------------------------CHHHHHHHHH-hCCCEE----EeeCCHHHHHH
Confidence 9985421 1 1223333333 346773 25999999999
Q ss_pred HHHcCCCEEEE
Q 037779 241 MMQLGCDGVFV 251 (310)
Q Consensus 241 ~~~~GadgV~V 251 (310)
+.++|+|.|.+
T Consensus 135 A~~~Gad~vk~ 145 (225)
T 1mxs_A 135 GYALGYRRFKL 145 (225)
T ss_dssp HHTTTCCEEEE
T ss_pred HHHCCCCEEEE
Confidence 99999999988
No 230
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=96.34 E-value=0.38 Score=43.38 Aligned_cols=186 Identities=12% Similarity=0.037 Sum_probs=101.5
Q ss_pred ceeeecCCc-----cccCCCHHHHHHHHHcCCcEE-EecccccchhhhcCCCCCCCChHHHHHHH---hhcCcceEeecc
Q 037779 30 LAQMLRGGV-----IMDVVTPEQARIAEEAGACAV-MALERVPADIRAQGGVARMSDPQLIKQIK---SSVTIPVMAKAR 100 (310)
Q Consensus 30 ~~~~l~~g~-----i~~~~~~~~a~~~~~~Ga~~I-~~l~~~~~d~r~~~G~~~~~~~~~i~~i~---~~~~lPv~~kd~ 100 (310)
+.++|+.|. .....+++.++.+...|+|++ .+++..|.+ .+.+.... +..+.|++++..
T Consensus 30 ~k~~l~~G~~~~gl~~~~~~p~~~e~a~~~GaD~v~lDlEh~~~~------------~~~~~~~l~a~~~~~~~~~VRv~ 97 (287)
T 2v5j_A 30 FKAALKAGRPQIGLWLGLSSSYSAELLAGAGFDWLLIDGEHAPNN------------VQTVLTQLQAIAPYPSQPVVRPS 97 (287)
T ss_dssp HHHHHHTTCCEEEEEECSCCHHHHHHHHTSCCSEEEEESSSSSCC------------HHHHHHHHHHHTTSSSEEEEECS
T ss_pred HHHHHHCCCcEEEEEEECCCHHHHHHHHhCCCCEEEEeCCCccch------------HHHHHHHHHHHHhcCCCEEEEEC
Confidence 445555554 455677999999999999987 334222221 22332222 233667776644
Q ss_pred ccchHHHHHHHHcCCCeeeecCCCChhHHHHHHHh-cC-------C----------------------CCcEEeecCCHH
Q 037779 101 IGHFVEAQILEAIGVDYVDESEVLTPADEENHINK-HN-------F----------------------RVPFVCGCRNLG 150 (310)
Q Consensus 101 i~~~~~~~~~~~aGad~v~~~~~~~~~~~~~~~~~-~~-------~----------------------~l~v~~~v~t~~ 150 (310)
-.+..+++.+..+|++.|..+...+++++.+.... +. . .+.+++-+.|++
T Consensus 98 ~~d~~di~~~ld~ga~~ImlP~V~saeea~~~~~~~~~~p~G~Rg~g~~~~ra~~~g~~~~y~~~~~~~~~vi~mIEt~~ 177 (287)
T 2v5j_A 98 WNDPVQIKQLLDVGTQTLLVPMVQNADEAREAVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCVLVQIETRE 177 (287)
T ss_dssp SSCHHHHHHHHHTTCCEEEESCCCSHHHHHHHHHHTSCTTTSCCCGGGTTTGGGTTTTSTTHHHHHHHHCEEEEEECSHH
T ss_pred CCCHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHHhccCccCccccccchhhhhhccchhhhHhhcCCCcEEEEEECcHH
Confidence 33334667778899999988777677776655443 11 0 145666667766
Q ss_pred HHHHHHH----hCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHh---cCCCC
Q 037779 151 ESLRRIR----EGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQ---LGRLP 223 (310)
Q Consensus 151 ea~~a~~----~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~---~~~iP 223 (310)
-+..+.+ .|.|.+.+. + .+...+++. ..+.. .+. -...++.+.. ...+|
T Consensus 178 av~n~deIaa~~~vD~l~iG-~---------~DLs~~lg~----~~~~~-~p~---------v~~a~~~iv~aaraaG~~ 233 (287)
T 2v5j_A 178 AMKNLPQILDVEGVDGVFIG-P---------ADLSADMGY----AGNPQ-HPE---------VQAAIEQAIVQIRESGKA 233 (287)
T ss_dssp HHHTHHHHHTSTTEEEEEEC-H---------HHHHHHTTS----TTCCC-SHH---------HHHHHHHHHHHHHHTTSE
T ss_pred HHHHHHHHhCcCCCCEEEEC-H---------HHHHHHhCC----CCCCC-CHH---------HHHHHHHHHHHHHHcCCe
Confidence 4433322 256666663 2 011111110 00000 000 0122222211 23567
Q ss_pred EEEEccCCCCCHHHHHHHHHcCCCEEEEcccc
Q 037779 224 VVHFAAGGVATPADAAMMMQLGCDGVFVGSGV 255 (310)
Q Consensus 224 Vv~ia~GGI~t~~di~~~~~~GadgV~VGsai 255 (310)
+.++ . .+++.+..+++.|++.+.+|+-.
T Consensus 234 ~gv~--~--~d~~~a~~~~~~G~~~~s~~~d~ 261 (287)
T 2v5j_A 234 PGIL--I--ANEQLAKRYLELGALFVAVGVDT 261 (287)
T ss_dssp EEEE--C--CCHHHHHHHHHTTCSEEEEEEHH
T ss_pred eEEe--c--CCHHHHHHHHHhCCCEEEECcHH
Confidence 6433 2 27999999999999999999943
No 231
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=96.21 E-value=0.55 Score=43.04 Aligned_cols=174 Identities=13% Similarity=0.088 Sum_probs=100.4
Q ss_pred cCCCHHHHHHHHHcCCcEEEecccccch--hh-hcCCC--CCCCC----hHHHHHHHhhc-CcceEeeccc--cc----h
Q 037779 41 DVVTPEQARIAEEAGACAVMALERVPAD--IR-AQGGV--ARMSD----PQLIKQIKSSV-TIPVMAKARI--GH----F 104 (310)
Q Consensus 41 ~~~~~~~a~~~~~~Ga~~I~~l~~~~~d--~r-~~~G~--~~~~~----~~~i~~i~~~~-~lPv~~kd~i--~~----~ 104 (310)
.+.|+-.|+.++++|+++|- + ++ .- ...|. ...-. ...++.|++.+ ++||++..-. +. .
T Consensus 45 ~ayD~~sA~i~e~aGfdai~-v----s~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~~PviaD~d~Gyg~~~~v~ 119 (318)
T 1zlp_A 45 GVQDALSAAVVEKTGFHAAF-V----SGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAAPNLCVVVDGDTGGGGPLNVQ 119 (318)
T ss_dssp EECSHHHHHHHHHTTCSEEE-E----CHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHHSSSSEEEEECTTCSSSHHHHH
T ss_pred cCCCHHHHHHHHHcCCCEEE-E----CcHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhhccCCCEEEeCCCCCCCHHHHH
Confidence 45677889999999999982 2 12 11 11111 11111 23456777788 9999985332 32 2
Q ss_pred HHHHHHHHcCCCeeeecCC--------------CChhHHHHHHHh-----cCCCCcEEeecCCHH---------HHHHHH
Q 037779 105 VEAQILEAIGVDYVDESEV--------------LTPADEENHINK-----HNFRVPFVCGCRNLG---------ESLRRI 156 (310)
Q Consensus 105 ~~~~~~~~aGad~v~~~~~--------------~~~~~~~~~~~~-----~~~~l~v~~~v~t~~---------ea~~a~ 156 (310)
..+..+.++||.+|.+-+. .+..+....++. ...+..+..-+.... .++...
T Consensus 120 ~tv~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARtda~a~~gl~~ai~Ra~Ay~ 199 (318)
T 1zlp_A 120 RFIRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVARTDARAPHGLEEGIRRANLYK 199 (318)
T ss_dssp HHHHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEECTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEeeHHhhhcCHHHHHHHHHHHH
Confidence 3456677899999983221 222233333322 123345555443321 223344
Q ss_pred HhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEE-EccCCCCCH
Q 037779 157 REGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVH-FAAGGVATP 235 (310)
Q Consensus 157 ~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~-ia~GGI~t~ 235 (310)
++|||.|.+.+. .+.+.++.+.+..++|+++ +.++|-...
T Consensus 200 eAGAd~i~~e~~---------------------------------------~~~e~~~~i~~~l~~P~lan~~~~g~~~~ 240 (318)
T 1zlp_A 200 EAGADATFVEAP---------------------------------------ANVDELKEVSAKTKGLRIANMIEGGKTPL 240 (318)
T ss_dssp HTTCSEEEECCC---------------------------------------CSHHHHHHHHHHSCSEEEEEECTTSSSCC
T ss_pred HcCCCEEEEcCC---------------------------------------CCHHHHHHHHHhcCCCEEEEeccCCCCCC
Confidence 678887776521 1345666676666789842 335553223
Q ss_pred HHHHHHHHcCCCEEEEccccccC
Q 037779 236 ADAAMMMQLGCDGVFVGSGVFKS 258 (310)
Q Consensus 236 ~di~~~~~~GadgV~VGsai~~~ 258 (310)
-+..++.++|+.-|..|...+++
T Consensus 241 ~~~~eL~~lGv~~v~~~~~~~ra 263 (318)
T 1zlp_A 241 HTPEEFKEMGFHLIAHSLTAVYA 263 (318)
T ss_dssp CCHHHHHHHTCCEEEECSHHHHH
T ss_pred CCHHHHHHcCCeEEEEchHHHHH
Confidence 45788999999999999998874
No 232
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=96.18 E-value=0.063 Score=49.99 Aligned_cols=113 Identities=19% Similarity=0.222 Sum_probs=73.4
Q ss_pred HHHHHHHHHc--CCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhc-CcceEeeccccchHHHHHHHHcCCCeeeec
Q 037779 45 PEQARIAEEA--GACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSV-TIPVMAKARIGHFVEAQILEAIGVDYVDES 121 (310)
Q Consensus 45 ~~~a~~~~~~--Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~-~lPv~~kd~i~~~~~~~~~~~aGad~v~~~ 121 (310)
.+.++.+.+. |++.+. + +. .+ |.. ....+.++.+++.+ ++||+++... +.+.++.+.++|||+|...
T Consensus 120 ~~~~~~l~~~~~g~~~i~-i-----~~-~~-g~~-~~~~~~i~~lr~~~~~~~vi~g~v~-t~e~A~~a~~aGaD~I~v~ 189 (351)
T 2c6q_A 120 FEQLEQILEAIPQVKYIC-L-----DV-AN-GYS-EHFVEFVKDVRKRFPQHTIMAGNVV-TGEMVEELILSGADIIKVG 189 (351)
T ss_dssp HHHHHHHHHHCTTCCEEE-E-----EC-SC-TTB-HHHHHHHHHHHHHCTTSEEEEEEEC-SHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHhccCCCCEEE-E-----Ee-cC-CCc-HHHHHHHHHHHHhcCCCeEEEEeCC-CHHHHHHHHHhCCCEEEEC
Confidence 3567777776 899863 2 11 11 110 01146788888888 8999876543 4578889999999999532
Q ss_pred C--------------CCChhHHHHHHHh--cCCCCcEEe--ecCCHHHHHHHHHhCCCEEEEec
Q 037779 122 E--------------VLTPADEENHINK--HNFRVPFVC--GCRNLGESLRRIREGAAMIRTKG 167 (310)
Q Consensus 122 ~--------------~~~~~~~~~~~~~--~~~~l~v~~--~v~t~~ea~~a~~~Gad~I~v~g 167 (310)
. ..+....+..+.+ ...++++++ ++.|..++.+++.+||+.|.+..
T Consensus 190 ~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~~~ipvIa~GGI~~g~di~kAlalGA~~V~vG~ 253 (351)
T 2c6q_A 190 IGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGG 253 (351)
T ss_dssp SSCSTTBCHHHHHCBCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEEST
T ss_pred CCCCcCcCccccCCCCccHHHHHHHHHHHHhhcCCcEEEeCCCCCHHHHHHHHHcCCCceeccH
Confidence 1 0111112222211 124688888 79999999999999999998853
No 233
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=96.17 E-value=0.014 Score=52.22 Aligned_cols=46 Identities=17% Similarity=0.135 Sum_probs=38.6
Q ss_pred cHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccC
Q 037779 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKS 258 (310)
Q Consensus 209 ~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~ 258 (310)
..+.++.+.+..++|+. ..|||.+. ++.+++ +||+-|++||+.++.
T Consensus 64 n~~~i~~i~~~~~~pv~--vgGGir~~-~~~~~l-~Ga~~Viigs~a~~~ 109 (260)
T 2agk_A 64 NDDAAREALQESPQFLQ--VGGGINDT-NCLEWL-KWASKVIVTSWLFTK 109 (260)
T ss_dssp CHHHHHHHHHHSTTTSE--EESSCCTT-THHHHT-TTCSCEEECGGGBCT
T ss_pred CHHHHHHHHhcCCceEE--EeCCCCHH-HHHHHh-cCCCEEEECcHHHhh
Confidence 35667777776778994 59999876 999999 999999999999984
No 234
>3qw3_A Orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative (OMPDCASE-OPRTASE,...; orotidine monophosphate decarboxylase; 1.70A {Leishmania infantum}
Probab=96.17 E-value=0.08 Score=47.12 Aligned_cols=168 Identities=13% Similarity=0.168 Sum_probs=85.2
Q ss_pred HHHHHHHhh--cCcceEeecccc----chHH-HHHHH-HcCCCeeeecCCCChhHHHHHHHhcCCCCcEEeecCCHH--H
Q 037779 82 QLIKQIKSS--VTIPVMAKARIG----HFVE-AQILE-AIGVDYVDESEVLTPADEENHINKHNFRVPFVCGCRNLG--E 151 (310)
Q Consensus 82 ~~i~~i~~~--~~lPv~~kd~i~----~~~~-~~~~~-~aGad~v~~~~~~~~~~~~~~~~~~~~~l~v~~~v~t~~--e 151 (310)
+.++++.+. .+.+|+..-..+ +... ++.+. ..|+|.+..+......-+...+...+.++.+++.+.+.. +
T Consensus 64 ~~l~~l~~~~~~g~~VflDlK~~DI~nTv~~~a~~~~~~lg~d~vTvh~~~G~~~l~~~~~~~~~gv~vL~~tS~~~~~~ 143 (255)
T 3qw3_A 64 AALSEVIRAVPAGIPVVLDAKRGDIADTADAYATSAFKHLNAHAITASPYMGSDSLQPFMRYPDKAVFVLCKTSNKGSND 143 (255)
T ss_dssp HHHHHHHHHSCTTCCBEEEEEECCCHHHHHHHHHHHHTTSCCSEEEECCTTCHHHHHHHHTCTTSEEEEEEECCSGGGGT
T ss_pred HHHHHHHHHhcCCCeEEEEeecCCcHHHHHHHHHHHHHHcCCCEEEEcccCCHHHHHHHHHhhCCceEEEEeCCCccHHH
Confidence 355555543 467887754443 2222 34555 499999987665554444433332334466666665542 1
Q ss_pred HHHHHHhCCCEEEEecCCCCCchHHHHHHHHH-hhcceecccccCchhHHhhhccCCCcHHHHHHHHhc-CCCCEEEEcc
Q 037779 152 SLRRIREGAAMIRTKGEAGTGNIVEAVRHVRS-VMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQL-GRLPVVHFAA 229 (310)
Q Consensus 152 a~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~-~~iPVv~ia~ 229 (310)
.. +. .+.+ .+.....++.++. .. ....++++ .+-..+.+ +..+++. .+.+++ +
T Consensus 144 ~q---~~-----~~~~---~~~~~~V~~~a~~~~~-------~~g~~GvV---~~at~~~e-~~~ir~~~~~~~~l-~-- 198 (255)
T 3qw3_A 144 LQ---CL-----RVGD---RYLYEAVAERAEGPWN-------VNGNVGLV---VGATDPVA-LARVRARAPTLWFL-V-- 198 (255)
T ss_dssp TT---TS-----EETT---EEHHHHHHHHHHTGGG-------GGSCEEEE---ECSSCHHH-HHHHHHHCSSCCEE-E--
T ss_pred HH---hc-----ccCC---CCHHHHHHHHHHHHhh-------hhCCeEEE---ECCCCHHH-HHHHHHHCCCCeEE-E--
Confidence 10 00 1110 0111223333322 10 00111110 00011233 3455543 344553 2
Q ss_pred CCCCC-HHHHHHHHHcCCC----E--EEEccccccCCCHHHHHHHHHHHHHc
Q 037779 230 GGVAT-PADAAMMMQLGCD----G--VFVGSGVFKSGDPVRRARAIVQAVTN 274 (310)
Q Consensus 230 GGI~t-~~di~~~~~~Gad----g--V~VGsai~~~~dp~~~~~~~~~~~~~ 274 (310)
=||+. ..+..++++.|+| + ++||+.|++++||.+.++++.+.++.
T Consensus 199 PGIg~qg~tp~~a~~~G~d~~~~~~livvGR~I~~A~dp~~aa~~i~~~i~~ 250 (255)
T 3qw3_A 199 PGIGAQGGSLKASLDAGLRADGSGMLINVSRGLARAADPRAAAKELCEEINA 250 (255)
T ss_dssp CCC-----CHHHHHHHHCCTTSCCEEEEESHHHHTSSCHHHHHHHHHHHHHH
T ss_pred CCcCCCCCCHHHHHHcCCCcccCeeEEEeChhhcCCCCHHHHHHHHHHHHHH
Confidence 44431 2356777788999 5 99999999999999999999988874
No 235
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=96.17 E-value=0.043 Score=51.77 Aligned_cols=117 Identities=17% Similarity=0.164 Sum_probs=73.9
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeeeecC--
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVDESE-- 122 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~~~~-- 122 (310)
.+.++.+.++|++.+. ++..+. ...+.+. ....+.++.+++.+++||+++.. .+.+.++.+.++|||.|....
T Consensus 168 ~e~a~~~~~agad~i~-i~~~~~-~~~~~~~--~~~~~~i~~l~~~~~~pvi~ggi-~t~e~a~~~~~~Gad~i~vg~Gg 242 (393)
T 2qr6_A 168 REIAPIVIKAGADLLV-IQGTLI-SAEHVNT--GGEALNLKEFIGSLDVPVIAGGV-NDYTTALHMMRTGAVGIIVGGGE 242 (393)
T ss_dssp HHHHHHHHHTTCSEEE-EECSSC-CSSCCCC-------CHHHHHHHCSSCEEEECC-CSHHHHHHHHTTTCSEEEESCCS
T ss_pred HHHHHHHHHCCCCEEE-EeCCcc-ccccCCC--cccHHHHHHHHHhcCCCEEECCc-CCHHHHHHHHHcCCCEEEECCCc
Confidence 4678888889999873 320000 0011111 01355688899999999999643 345788889999999987432
Q ss_pred ---------CCChhHHHHHHHh--------cCC-CCcEEe--ecCCHHHHHHHHHhCCCEEEEe
Q 037779 123 ---------VLTPADEENHINK--------HNF-RVPFVC--GCRNLGESLRRIREGAAMIRTK 166 (310)
Q Consensus 123 ---------~~~~~~~~~~~~~--------~~~-~l~v~~--~v~t~~ea~~a~~~Gad~I~v~ 166 (310)
..+..+.+..+.+ .+. .+++++ ++++..++.+++.+|||.|.+.
T Consensus 243 ~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~~~dv~kalalGA~~V~iG 306 (393)
T 2qr6_A 243 NTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIENSGDVVKAIACGADAVVLG 306 (393)
T ss_dssp CCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCSHHHHHHHHHHTCSEEEEC
T ss_pred ccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 1222233322222 121 277877 4999999999999999999885
No 236
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=96.15 E-value=0.41 Score=43.61 Aligned_cols=195 Identities=12% Similarity=0.062 Sum_probs=111.4
Q ss_pred HHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhh-cCcceEee-ccccchHHHHHHHHcCCCeeeec-CC
Q 037779 47 QARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSS-VTIPVMAK-ARIGHFVEAQILEAIGVDYVDES-EV 123 (310)
Q Consensus 47 ~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~-~~lPv~~k-d~i~~~~~~~~~~~aGad~v~~~-~~ 123 (310)
..+++++.++..|.++- + ....+.|.... ...++...+. .++||.++ |.-.+++....+.++|-+.|-++ +.
T Consensus 33 vi~AAee~~sPvIlq~s--~-g~~~y~g~~~~--~~~v~~aa~~~~~VPValHLDHg~~~e~~~~ai~~GFtSVMiDgS~ 107 (307)
T 3n9r_A 33 IFEAGNEENSPLFIQAS--E-GAIKYMGIDMA--VGMVKIMCERYPHIPVALHLDHGTTFESCEKAVKAGFTSVMIDASH 107 (307)
T ss_dssp HHHHHHHHTCCEEEEEE--H-HHHHHHCHHHH--HHHHHHHHHHSTTSCEEEEEEEECSHHHHHHHHHHTCSEEEECCTT
T ss_pred HHHHHHHhCCCEEEEcC--h-hhhhhCCHHHH--HHHHHHHHHhcCCCcEEEECCCCCCHHHHHHHHHhCCCcEEEECCC
Confidence 46677777888775551 1 11122221000 1223344444 68999886 44335677788889999888643 22
Q ss_pred CChh-------HHHHHHHhcCCCCcEEe-------------------ecCCHHHHHHHH-HhCCCEEEEe-cCCCCCchH
Q 037779 124 LTPA-------DEENHINKHNFRVPFVC-------------------GCRNLGESLRRI-REGAAMIRTK-GEAGTGNIV 175 (310)
Q Consensus 124 ~~~~-------~~~~~~~~~~~~l~v~~-------------------~v~t~~ea~~a~-~~Gad~I~v~-g~~~~~~~~ 175 (310)
++.+ ++.+..++.+ +.+=. -.++++|+.+.. +.|+|.+.+. |..++.
T Consensus 108 ~p~eeNi~~Tk~vv~~ah~~g--vsVEaELG~igG~Ed~~~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~HG~--- 182 (307)
T 3n9r_A 108 HAFEENLELTSKVVKMAHNAG--VSVEAELGRLMGIEDNISVDEKDAVLVNPKEAEQFVKESQVDYLAPAIGTSHGA--- 182 (307)
T ss_dssp SCHHHHHHHHHHHHHHHHHTT--CEEEEEESCCCCC----------CCSCCHHHHHHHHHHHCCSEEEECSSCCSSS---
T ss_pred CCHHHHHHHHHHHHHHHHHcC--CeEEEEeeeeccccCCcccccccccCCCHHHHHHHHHHHCCCEEEEecCCcccc---
Confidence 3333 3333443333 21111 125788888765 5899998764 443221
Q ss_pred HHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccC---------------------CCCC
Q 037779 176 EAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAG---------------------GVAT 234 (310)
Q Consensus 176 ~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~G---------------------GI~t 234 (310)
++. .. ...-++++++.+++..++|+|.=-++ |+ .
T Consensus 183 ---------------Yk~-~~--------~p~Ld~~~L~~I~~~~~~PLVlHGgS~vp~~~~~~~~~~gg~~~~~~G~-p 237 (307)
T 3n9r_A 183 ---------------FKF-KG--------EPKLDFERLQEVKRLTNIPLVLHGASAIPDNVRKSYLDAGGDLKGSKGV-P 237 (307)
T ss_dssp ---------------BCC-SS--------SCCCCHHHHHHHHHHHCSCEEESSCCCCCHHHHHHHHHTTCCCTTCBCC-C
T ss_pred ---------------cCC-CC--------CCccCHHHHHHHHhcCCCCeEEeCCCCcchHHHHHHHHhcCccCCCCCC-C
Confidence 010 00 01225777777766567888654344 87 4
Q ss_pred HHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHcC---CChhhH
Q 037779 235 PADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTNY---SDPDVL 281 (310)
Q Consensus 235 ~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~~---~~~~~~ 281 (310)
.+++++++++|..-|=++|.+-. .+.+.+++.+.+. -+|+.+
T Consensus 238 ~e~i~~ai~~GV~KiNi~Tdl~~-----a~~~~vr~~~~~~~~~~dpr~~ 282 (307)
T 3n9r_A 238 FEFLQESVKGGINKVNTDTDLRI-----AFIAEVRKVANEDKSQFDLRKF 282 (307)
T ss_dssp HHHHHHHHHTTEEEEEECHHHHH-----HHHHHHHHHHHHCTTCCCHHHH
T ss_pred HHHHHHHHHcCceEEEechHHHH-----HHHHHHHHHHHhCCCcCCHHHH
Confidence 89999999999999999997754 2344444444332 356555
No 237
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=96.11 E-value=0.82 Score=41.94 Aligned_cols=178 Identities=11% Similarity=0.088 Sum_probs=103.8
Q ss_pred HHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhh-cCcceEee-ccccchHHHHHHHHcCCCeeeec-CC
Q 037779 47 QARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSS-VTIPVMAK-ARIGHFVEAQILEAIGVDYVDES-EV 123 (310)
Q Consensus 47 ~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~-~~lPv~~k-d~i~~~~~~~~~~~aGad~v~~~-~~ 123 (310)
..+++++.++..|.++- +. ...+.|...+ ...++...+. .++||.++ |.-.+++.+..+.++|-+.|-++ +.
T Consensus 34 il~AAee~~sPvIlq~s--~g-~~~y~g~~~~--~~~v~~aa~~~~~VPValHlDHg~~~e~i~~ai~~GFtSVMiDgS~ 108 (323)
T 2isw_A 34 IMKAVVQLKSPVILQCS--RG-ALKYSDMIYL--KKLCEAALEKHPDIPICIHLDHGDTLESVKMAIDLGFSSVMIDASH 108 (323)
T ss_dssp HHHHHHHTTCCEEEEEE--HH-HHHHTTTHHH--HHHHHHHHHHCTTSCEEEEEEEECSHHHHHHHHHTTCSEEEECCTT
T ss_pred HHHHHHHhCCCEEEECC--hh-HHHhCCHHHH--HHHHHHHHHhcCCCcEEEECCCCCCHHHHHHHHHcCCCeEEecCCC
Confidence 46777778888876651 11 1223332000 2234444445 78999886 44335677888899999988633 22
Q ss_pred CChh-------HHHHHHHhcCCCCcEEe----------------ecCCHHHHHHHH-HhCCCEEEEe-cCCCCCchHHHH
Q 037779 124 LTPA-------DEENHINKHNFRVPFVC----------------GCRNLGESLRRI-REGAAMIRTK-GEAGTGNIVEAV 178 (310)
Q Consensus 124 ~~~~-------~~~~~~~~~~~~l~v~~----------------~v~t~~ea~~a~-~~Gad~I~v~-g~~~~~~~~~~~ 178 (310)
++.+ ++.+..++ .|+.+=. -.++++|+.+.. +.|+|.+.+. |..++..
T Consensus 109 ~p~eENi~~Tk~vv~~ah~--~gvsVEaELG~vgg~Ed~v~~~~~yTdPeea~~Fv~~TgvD~LAvaiGt~HG~Y----- 181 (323)
T 2isw_A 109 HPFDENVRITKEVVAYAHA--RSVSVEAELGTLGGIEEDVQNTVQLTEPQDAKKFVELTGVDALAVAIGTSHGAY----- 181 (323)
T ss_dssp SCHHHHHHHHHHHHHHHHT--TTCEEEEEESCC----------CCCCCHHHHHHHHHHHCCSEEEECSSCCSSSB-----
T ss_pred CCHHHHHHHHHHHHHHHHH--cCCeEEEEeCCccCCccCcccccccCCHHHHHHHHHHHCCCEEEEecCcccccc-----
Confidence 3333 23333332 2222211 126788888766 6899988765 4433211
Q ss_pred HHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccC---------------------CCCCHHH
Q 037779 179 RHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAG---------------------GVATPAD 237 (310)
Q Consensus 179 ~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~G---------------------GI~t~~d 237 (310)
+. +.++ ...-++++++.+.+..++|+|.=-++ |+ ..++
T Consensus 182 -------------k~-~~~p------~~~L~~~~L~~I~~~~~vpLVlHGgSsvp~~~~~~~~~~gg~~~~~~Gv-p~e~ 240 (323)
T 2isw_A 182 -------------KF-KSES------DIRLAIDRVKTISDLTGIPLVMHGSSSVPKDVKDMINKYGGKMPDAVGV-PIES 240 (323)
T ss_dssp -------------CC-CC----------CCCCHHHHHHHHHHCSCEEECSCCCCCHHHHHHHHHTTCCCTTCBCC-CHHH
T ss_pred -------------CC-CCCc------ccccCHHHHHHHHHHhCCCeEEECCCCCCHHHHHHHHHhccccccCCCC-CHHH
Confidence 10 0000 10124677888877668898653233 88 5899
Q ss_pred HHHHHHcCCCEEEEcccccc
Q 037779 238 AAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 238 i~~~~~~GadgV~VGsai~~ 257 (310)
+++++++|..-|=++|.+-.
T Consensus 241 i~~ai~~GV~KiNi~Tdl~~ 260 (323)
T 2isw_A 241 IVHAIGEGVCKINVDSDSRM 260 (323)
T ss_dssp HHHHHHTTEEEEEECHHHHH
T ss_pred HHHHHHCCCeEEEEChHHHH
Confidence 99999999999999997754
No 238
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=96.08 E-value=0.05 Score=48.36 Aligned_cols=81 Identities=14% Similarity=0.168 Sum_probs=55.9
Q ss_pred cHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHcC--------CChhh
Q 037779 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTNY--------SDPDV 280 (310)
Q Consensus 209 ~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~~--------~~~~~ 280 (310)
..+.++.+++..++|| ..-++|.++.++.+++++|||+|++|...+. +. ++++.+..+.+ ++..-
T Consensus 94 ~~~~l~~i~~~v~lPv--l~kdfI~d~~qi~~a~~~GAD~VlL~~~~l~-~~----l~~l~~~a~~lGl~~lvev~~~~E 166 (254)
T 1vc4_A 94 SLLDLKRVREAVDLPL--LRKDFVVDPFMLEEARAFGASAALLIVALLG-EL----TGAYLEEARRLGLEALVEVHTERE 166 (254)
T ss_dssp CHHHHHHHHHHCCSCE--EEESCCCSHHHHHHHHHTTCSEEEEEHHHHG-GG----HHHHHHHHHHHTCEEEEEECSHHH
T ss_pred CHHHHHHHHHhcCCCE--EECCcCCCHHHHHHHHHcCCCEEEECccchH-HH----HHHHHHHHHHCCCeEEEEECCHHH
Confidence 4556677777778999 4588999999999999999999999999887 43 34444322221 22222
Q ss_pred HHhhhhccCCceecccc
Q 037779 281 LAEVSCGLGEAMVGIDL 297 (310)
Q Consensus 281 ~~~~~~~~~~~~~~~~~ 297 (310)
+ +.+..+|.++.|+..
T Consensus 167 ~-~~a~~~gad~IGvn~ 182 (254)
T 1vc4_A 167 L-EIALEAGAEVLGINN 182 (254)
T ss_dssp H-HHHHHHTCSEEEEES
T ss_pred H-HHHHHcCCCEEEEcc
Confidence 2 345566888888744
No 239
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=96.06 E-value=0.084 Score=45.74 Aligned_cols=113 Identities=16% Similarity=0.158 Sum_probs=72.1
Q ss_pred CHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhc-CcceEeeccccchHHHHHHHHcCCCee--ee
Q 037779 44 TPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSV-TIPVMAKARIGHFVEAQILEAIGVDYV--DE 120 (310)
Q Consensus 44 ~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~-~lPv~~kd~i~~~~~~~~~~~aGad~v--~~ 120 (310)
+.+.++.+.++|++.|. +. .... .... -....+.++.+++.. +.++.+.. .+.++++.+.++|+|+| ..
T Consensus 90 ~~~~i~~~~~~Gad~V~-l~---~~~~-~~~~-~~~~~~~i~~i~~~~~~~~v~~~~--~t~~ea~~a~~~Gad~i~~~v 161 (234)
T 1yxy_A 90 TMTEVDQLAALNIAVIA-MD---CTKR-DRHD-GLDIASFIRQVKEKYPNQLLMADI--STFDEGLVAHQAGIDFVGTTL 161 (234)
T ss_dssp SHHHHHHHHTTTCSEEE-EE---CCSS-CCTT-CCCHHHHHHHHHHHCTTCEEEEEC--SSHHHHHHHHHTTCSEEECTT
T ss_pred hHHHHHHHHHcCCCEEE-Ec---cccc-CCCC-CccHHHHHHHHHHhCCCCeEEEeC--CCHHHHHHHHHcCCCEEeeec
Confidence 46889999999999983 31 0000 0000 001146788888776 67776643 34467888889999999 31
Q ss_pred c---CC---CCh--hHHHHHHHhcCCCCcEEe--ecCCHHHHHHHHHhCCCEEEEe
Q 037779 121 S---EV---LTP--ADEENHINKHNFRVPFVC--GCRNLGESLRRIREGAAMIRTK 166 (310)
Q Consensus 121 ~---~~---~~~--~~~~~~~~~~~~~l~v~~--~v~t~~ea~~a~~~Gad~I~v~ 166 (310)
. .. ... .+..+.+.+. ++++++ +++|.+++..+.+.|+|.+.+.
T Consensus 162 ~g~~~~~~~~~~~~~~~i~~~~~~--~ipvia~GGI~s~~~~~~~~~~Gad~v~vG 215 (234)
T 1yxy_A 162 SGYTPYSRQEAGPDVALIEALCKA--GIAVIAEGKIHSPEEAKKINDLGVAGIVVG 215 (234)
T ss_dssp TTSSTTSCCSSSCCHHHHHHHHHT--TCCEEEESCCCSHHHHHHHHTTCCSEEEEC
T ss_pred cccCCCCcCCCCCCHHHHHHHHhC--CCCEEEECCCCCHHHHHHHHHCCCCEEEEc
Confidence 1 11 011 1334445443 577776 4889999999999999999885
No 240
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=96.04 E-value=0.48 Score=42.95 Aligned_cols=173 Identities=17% Similarity=0.115 Sum_probs=92.7
Q ss_pred cCCCHHHHHHHHHcCCcEEEecccccch-hhhcCCC---CCCCC---hHHHHHHHhhcCcceEeecc--ccc----hHHH
Q 037779 41 DVVTPEQARIAEEAGACAVMALERVPAD-IRAQGGV---ARMSD---PQLIKQIKSSVTIPVMAKAR--IGH----FVEA 107 (310)
Q Consensus 41 ~~~~~~~a~~~~~~Ga~~I~~l~~~~~d-~r~~~G~---~~~~~---~~~i~~i~~~~~lPv~~kd~--i~~----~~~~ 107 (310)
.+.|+-.|+.++++|+++|-.- .+ .-...|. ....- ...++.|++.+++||++..- .+. ...+
T Consensus 25 ~a~D~~sA~~~~~aG~~ai~vs----g~~~a~~lG~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~v~~~v 100 (295)
T 1s2w_A 25 EAHNGLSARIVQEAGFKGIWGS----GLSVSAQLGVRDSNEASWTQVVEVLEFMSDASDVPILLDADTGYGNFNNARRLV 100 (295)
T ss_dssp EECSHHHHHHHHHHTCSCEEEC----CHHHHHTC---------CHHHHHHHHHHHHTCSSCEEEECCSSCSSHHHHHHHH
T ss_pred cCCCHHHHHHHHHcCCCEEEeC----hHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEecCCCCCCCHHHHHHHH
Confidence 4567888999999999987221 00 1111111 00111 23456777788999887532 232 2345
Q ss_pred HHHHHcCCCeeeecCC----------------CChhHHHHHHHh---c--CCCCcEEeecCCH------HH----HHHHH
Q 037779 108 QILEAIGVDYVDESEV----------------LTPADEENHINK---H--NFRVPFVCGCRNL------GE----SLRRI 156 (310)
Q Consensus 108 ~~~~~aGad~v~~~~~----------------~~~~~~~~~~~~---~--~~~l~v~~~v~t~------~e----a~~a~ 156 (310)
..+.++||.+|++-+. .+..+....++. . ..+..+..-+... ++ ++...
T Consensus 101 ~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~ai~Ra~ay~ 180 (295)
T 1s2w_A 101 RKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARVEAFIAGWGLDEALKRAEAYR 180 (295)
T ss_dssp HHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEECTTTTTCCHHHHHHHHHHHH
T ss_pred HHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHHhccccHHHHHHHHHHHH
Confidence 6677899999983222 122233333322 1 2234444433222 32 23334
Q ss_pred HhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCC--CCEEEEc-cCCCC
Q 037779 157 REGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGR--LPVVHFA-AGGVA 233 (310)
Q Consensus 157 ~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~--iPVv~ia-~GGI~ 233 (310)
++|||.|.+.+. ..+.+.++.+.+..+ +|+++.. ++|-.
T Consensus 181 eAGAd~i~~e~~--------------------------------------~~~~~~~~~i~~~~~~~~P~i~~~~~~~~~ 222 (295)
T 1s2w_A 181 NAGADAILMHSK--------------------------------------KADPSDIEAFMKAWNNQGPVVIVPTKYYKT 222 (295)
T ss_dssp HTTCSEEEECCC--------------------------------------SSSSHHHHHHHHHHTTCSCEEECCSTTTTS
T ss_pred HcCCCEEEEcCC--------------------------------------CCCHHHHHHHHHHcCCCCCEEEeCCCCCCC
Confidence 567777666410 011334444444433 8985321 13322
Q ss_pred CHHHHHHHHHcCCCEEEEccccccC
Q 037779 234 TPADAAMMMQLGCDGVFVGSGVFKS 258 (310)
Q Consensus 234 t~~di~~~~~~GadgV~VGsai~~~ 258 (310)
.+.++.++|+.-|..|...+++
T Consensus 223 ---~~~eL~~lGv~~v~~~~~~~ra 244 (295)
T 1s2w_A 223 ---PTDHFRDMGVSMVIWANHNLRA 244 (295)
T ss_dssp ---CHHHHHHHTCCEEEECSHHHHH
T ss_pred ---CHHHHHHcCCcEEEEChHHHHH
Confidence 3788999999999999998874
No 241
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=96.03 E-value=0.043 Score=49.69 Aligned_cols=21 Identities=24% Similarity=0.352 Sum_probs=17.4
Q ss_pred CCCEEEEcc-CCCCCHHHHHHHHH
Q 037779 221 RLPVVHFAA-GGVATPADAAMMMQ 243 (310)
Q Consensus 221 ~iPVv~ia~-GGI~t~~di~~~~~ 243 (310)
++.|- ++ |||.|.+++.++++
T Consensus 231 ~vgvK--As~GGIrt~e~A~~~i~ 252 (297)
T 4eiv_A 231 CIGIK--IEVGDVHMAETADFLMQ 252 (297)
T ss_dssp CCEEE--EECTTCCHHHHHHHHHH
T ss_pred ceeEE--ecCCCCCCHHHHHHHHH
Confidence 45664 57 99999999999998
No 242
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=95.98 E-value=0.037 Score=49.71 Aligned_cols=145 Identities=14% Similarity=0.163 Sum_probs=90.4
Q ss_pred ecceEEEEeccCCCccccccceeeecCCccccCCCHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHh
Q 037779 10 YGNGAIYETTKKSPFSVKVGLAQMLRGGVIMDVVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKS 89 (310)
Q Consensus 10 ~~~~~i~e~k~~sp~~~~~~~~~~l~~g~i~~~~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~ 89 (310)
.++..|-|++.+- ..|+..+-|.|+ ...|+.+++.|+|.| +- ++. +...+.+..|.+
T Consensus 55 ~dp~~I~~I~~aV----sIPVm~k~righ------~~EAqilea~GaD~I-De----sev--------ltpad~~~~I~k 111 (291)
T 3o07_A 55 SDPKMIKDIMNSV----SIPVMAKVRIGH------FVEAQIIEALEVDYI-DE----SEV--------LTPADWTHHIEK 111 (291)
T ss_dssp CCHHHHHHHHTTC----SSCEEEEEETTC------HHHHHHHHHTTCSEE-EE----ETT--------SCCSCSSCCCCG
T ss_pred CCHHHHHHHHHhC----CCCeEEEEecCc------HHHHHHHHHcCCCEE-ec----ccC--------CCHHHHHHHhhh
Confidence 3445555655432 356777777755 788999999999988 43 222 112334444444
Q ss_pred -hcCcceEeeccccchHHHHHHHHcCCCeeeec-C------------------------CC--------------ChhHH
Q 037779 90 -SVTIPVMAKARIGHFVEAQILEAIGVDYVDES-E------------------------VL--------------TPADE 129 (310)
Q Consensus 90 -~~~lPv~~kd~i~~~~~~~~~~~aGad~v~~~-~------------------------~~--------------~~~~~ 129 (310)
..++|+++... +..++....+.||+.|-.. . .+ .+.++
T Consensus 112 ~~f~vpfv~~~~--~l~EAlrri~eGA~mIrTtge~gtg~v~~av~h~r~~~~~i~~l~g~~t~~el~~~a~~~~ad~el 189 (291)
T 3o07_A 112 DKFKVPFVCGAK--DLGEALRRINEGAAMIRTKGEAGTGDVSEAVKHIRRITEEIKACQQLKSEDDIAKVAEEMRVPVSL 189 (291)
T ss_dssp GGCSSCEEEEES--SHHHHHHHHHHTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHH
T ss_pred hcCCCcEEeeCC--CHHHHHHHHHCCCCEEEecCcCCCccHHHHHHHHHHHHHHHHHHHcCCCHHHhhhcccccCCCHHH
Confidence 35789987644 3467778888999998632 0 11 22345
Q ss_pred HHHHHhcCCCCcEE----eecCCHHHHHHHHHhCCCEEEEecC-CCCCchHHHHHH
Q 037779 130 ENHINKHNFRVPFV----CGCRNLGESLRRIREGAAMIRTKGE-AGTGNIVEAVRH 180 (310)
Q Consensus 130 ~~~~~~~~~~l~v~----~~v~t~~ea~~a~~~Gad~I~v~g~-~~~~~~~~~~~~ 180 (310)
++.+++. ..++++ -++.|++++..+.+.|+|.|.+... ...+++....++
T Consensus 190 I~~Ike~-~~IPVV~IAnGGI~TpedA~~~le~GaDGVmVGrAI~~s~DP~~~Aka 244 (291)
T 3o07_A 190 LKDVLEK-GKLPVVNFAAGGVATPADAALLMQLGCDGVFVGSGIFKSSNPVRLATA 244 (291)
T ss_dssp HHHHHHH-TSCSSCEEBCSSCCSHHHHHHHHHTTCSCEEECGGGGGSSCHHHHHHH
T ss_pred HHHHHHc-cCCCEEEecCCCCCCHHHHHHHHHhCCCEEEEchHHhCCCCHHHHHHH
Confidence 5555543 456653 2588999999999999999988633 333444444433
No 243
>1yya_A Triosephosphate isomerase; riken structural genomics/proteom initiative, RSGI, structural genomics; 1.60A {Thermus thermophilus}
Probab=95.97 E-value=0.058 Score=47.87 Aligned_cols=41 Identities=22% Similarity=0.412 Sum_probs=33.8
Q ss_pred CCCEEEEccCCCCCHHHHHHHHHc-CCCEEEEccccccCCCHHHH
Q 037779 221 RLPVVHFAAGGVATPADAAMMMQL-GCDGVFVGSGVFKSGDPVRR 264 (310)
Q Consensus 221 ~iPVv~ia~GGI~t~~di~~~~~~-GadgV~VGsai~~~~dp~~~ 264 (310)
.++| +..|+++ ++|+.++++. ++||++||++-.+++++...
T Consensus 204 ~vrI--lYGGSV~-~~N~~~l~~~~diDG~LVGgAsL~a~~F~~i 245 (250)
T 1yya_A 204 RVRI--LYGGSVN-PKNFADLLSMPNVDGGLVGGASLELESFLAL 245 (250)
T ss_dssp TCEE--EEESSCC-TTTHHHHHTSTTCCEEEESGGGSSHHHHHHH
T ss_pred ceeE--EEcCCCC-HHHHHHHHcCCCCCeeEeeHHHhChHHHHHH
Confidence 5777 6799995 8999999987 99999999999986554443
No 244
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=95.90 E-value=0.07 Score=50.01 Aligned_cols=86 Identities=17% Similarity=0.194 Sum_probs=63.8
Q ss_pred ChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeeeecC--------CCChhHHHHHHHh-cCCCCcEEe--ecCC
Q 037779 80 DPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVDESE--------VLTPADEENHINK-HNFRVPFVC--GCRN 148 (310)
Q Consensus 80 ~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~~~~--------~~~~~~~~~~~~~-~~~~l~v~~--~v~t 148 (310)
+.+.++.+++.+++|+++|... +.+.++.+.++|+|+|..+. ..+..+.+..+.+ ...++++++ ++++
T Consensus 213 ~~~~i~~l~~~~~~pv~vK~~~-~~e~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~ipvia~GGI~~ 291 (370)
T 1gox_A 213 SWKDVAWLQTITSLPILVKGVI-TAEDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLDGGVRR 291 (370)
T ss_dssp CHHHHHHHHHHCCSCEEEECCC-SHHHHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCEEEESSCCS
T ss_pred hHHHHHHHHHHhCCCEEEEecC-CHHHHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCCCCEEEEECCCCC
Confidence 3678999999999999998654 34788899999999987421 0122234444444 222577777 4999
Q ss_pred HHHHHHHHHhCCCEEEEe
Q 037779 149 LGESLRRIREGAAMIRTK 166 (310)
Q Consensus 149 ~~ea~~a~~~Gad~I~v~ 166 (310)
.+++.+++.+|||.|.+.
T Consensus 292 ~~D~~k~l~~GAdaV~iG 309 (370)
T 1gox_A 292 GTDVFKALALGAAGVFIG 309 (370)
T ss_dssp HHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEeec
Confidence 999999999999999985
No 245
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=95.90 E-value=0.052 Score=52.63 Aligned_cols=113 Identities=19% Similarity=0.237 Sum_probs=75.1
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhc-CcceEeeccccchHHHHHHHHcCCCeeeecC-
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSV-TIPVMAKARIGHFVEAQILEAIGVDYVDESE- 122 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~-~lPv~~kd~i~~~~~~~~~~~aGad~v~~~~- 122 (310)
.+.++.+.++|++.+. +. + ..|.. ....+.++.+++.+ ++|++.+ .+.+.+.+..+.++|||.|....
T Consensus 235 ~~~a~~l~~~G~d~iv-i~---~----a~g~~-~~~~~~i~~l~~~~p~~pvi~G-~v~t~~~a~~~~~~Gad~I~vg~g 304 (491)
T 1zfj_A 235 FERAEALFEAGADAIV-ID---T----AHGHS-AGVLRKIAEIRAHFPNRTLIAG-NIATAEGARALYDAGVDVVKVGIG 304 (491)
T ss_dssp HHHHHHHHHHTCSEEE-EC---C----SCTTC-HHHHHHHHHHHHHCSSSCEEEE-EECSHHHHHHHHHTTCSEEEECSS
T ss_pred HHHHHHHHHcCCCeEE-Ee---e----ecCcc-hhHHHHHHHHHHHCCCCcEeCC-CccCHHHHHHHHHcCCCEEEECcc
Confidence 4789999999999983 31 1 11110 11256788888887 8999854 33445677888999999985321
Q ss_pred -------------CCChhHHHHHHHh--cCCCCcEEe--ecCCHHHHHHHHHhCCCEEEEec
Q 037779 123 -------------VLTPADEENHINK--HNFRVPFVC--GCRNLGESLRRIREGAAMIRTKG 167 (310)
Q Consensus 123 -------------~~~~~~~~~~~~~--~~~~l~v~~--~v~t~~ea~~a~~~Gad~I~v~g 167 (310)
..+.......+.. ...++++++ ++++..++.+++.+||+.+.+..
T Consensus 305 ~g~~~~tr~~~~~~~p~~~~l~~~~~~~~~~~ipvia~GGi~~~~di~kal~~GA~~v~vG~ 366 (491)
T 1zfj_A 305 PGSICTTRVVAGVGVPQVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKALAAGGNAVMLGS 366 (491)
T ss_dssp CCTTBCHHHHTCCCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEEST
T ss_pred CCcceEEeeecCCCCCcHHHHHHHHHHHhhcCCCEEeeCCCCCHHHHHHHHHcCCcceeeCH
Confidence 1112222222222 124678888 59999999999999999999853
No 246
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=95.89 E-value=0.075 Score=52.03 Aligned_cols=112 Identities=13% Similarity=0.204 Sum_probs=75.1
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhc-CcceEeeccccchHHHHHHHHcCCCeeeec--
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSV-TIPVMAKARIGHFVEAQILEAIGVDYVDES-- 121 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~-~lPv~~kd~i~~~~~~~~~~~aGad~v~~~-- 121 (310)
.+.++.+.++|++.+ .++ +......+ ..+.++++++.. ++|+++++. .+.+.++.+.++|||+|...
T Consensus 258 ~era~aLveaGvd~I-~Id---~a~g~~~~-----v~~~i~~i~~~~~~~~vi~g~v-~t~e~a~~~~~aGad~i~vg~g 327 (511)
T 3usb_A 258 MTRIDALVKASVDAI-VLD---TAHGHSQG-----VIDKVKEVRAKYPSLNIIAGNV-ATAEATKALIEAGANVVKVGIG 327 (511)
T ss_dssp HHHHHHHHHTTCSEE-EEE---CSCTTSHH-----HHHHHHHHHHHCTTSEEEEEEE-CSHHHHHHHHHHTCSEEEECSS
T ss_pred HHHHHHHHhhccceE-Eec---ccccchhh-----hhhHHHHHHHhCCCceEEeeee-ccHHHHHHHHHhCCCEEEECCC
Confidence 577999999999998 341 10000111 156788888876 588887653 35578889999999998621
Q ss_pred --C--------C--CChhHHHHHHHh--cCCCCcEEe--ecCCHHHHHHHHHhCCCEEEEe
Q 037779 122 --E--------V--LTPADEENHINK--HNFRVPFVC--GCRNLGESLRRIREGAAMIRTK 166 (310)
Q Consensus 122 --~--------~--~~~~~~~~~~~~--~~~~l~v~~--~v~t~~ea~~a~~~Gad~I~v~ 166 (310)
. . .+....+..+.+ ...++++++ ++.+..++.+++.+||+.+.+.
T Consensus 328 ~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GA~~V~vG 388 (511)
T 3usb_A 328 PGSICTTRVVAGVGVPQLTAVYDCATEARKHGIPVIADGGIKYSGDMVKALAAGAHVVMLG 388 (511)
T ss_dssp CSTTCCHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred CccccccccccCCCCCcHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHHhCchhheec
Confidence 0 1 122222223222 234688888 5999999999999999999885
No 247
>2i9e_A Triosephosphate isomerase; 2.00A {Tenebrio molitor}
Probab=95.89 E-value=0.026 Score=50.34 Aligned_cols=41 Identities=22% Similarity=0.242 Sum_probs=32.9
Q ss_pred CCCEEEEccCCCCCHHHHHHHHH-cCCCEEEEccccccCCCHHHH
Q 037779 221 RLPVVHFAAGGVATPADAAMMMQ-LGCDGVFVGSGVFKSGDPVRR 264 (310)
Q Consensus 221 ~iPVv~ia~GGI~t~~di~~~~~-~GadgV~VGsai~~~~dp~~~ 264 (310)
.++| +..|+| +++++.+++. .++||++||++-.+++++...
T Consensus 202 ~vrI--lYGGSV-~~~N~~~l~~~~diDG~LVGgAsL~a~~F~~I 243 (259)
T 2i9e_A 202 SIRI--QYGGSV-TAANCKELASQPDIDGFLVGGASLKPEFVDII 243 (259)
T ss_dssp HCEE--EECSCC-CTTTHHHHHTSTTCCEEEESGGGGSTHHHHHH
T ss_pred cccE--EEcCCC-CHhhHHHHhcCCCCCeeeechHhhChHHHHHH
Confidence 3677 679999 5899988885 699999999999997655443
No 248
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=95.85 E-value=0.41 Score=41.31 Aligned_cols=176 Identities=16% Similarity=0.134 Sum_probs=104.6
Q ss_pred cCCCHHHHHHHHHcCC-cEEEecccccchhhhcC-CCCCCCChHHHHHHHhhcCcceEeeccccc----hHHHHHHHHcC
Q 037779 41 DVVTPEQARIAEEAGA-CAVMALERVPADIRAQG-GVARMSDPQLIKQIKSSVTIPVMAKARIGH----FVEAQILEAIG 114 (310)
Q Consensus 41 ~~~~~~~a~~~~~~Ga-~~I~~l~~~~~d~r~~~-G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~----~~~~~~~~~aG 114 (310)
+..+.+..+.+.+.|. +++. =| |+=. .+. |. .-.+.+++|++.++-||.....-.+ ..++..+.+.+
T Consensus 6 DtAn~~ei~~~~~~g~i~GVT-TN--Psli-~k~~g~---~~~~~~~eI~~~v~G~Vs~EV~a~d~e~mi~ea~~l~~~~ 78 (212)
T 3r8r_A 6 DTANIDEIREANELGILAGVT-TN--PSLV-AKEANV---SFHDRLREITDVVKGSVSAEVISLKAEEMIEEGKELAKIA 78 (212)
T ss_dssp ECCCHHHHHHHHHTTCEEEEE-CC--HHHH-HTSCSS---CHHHHHHHHHHHCCSCEEEECCCSSHHHHHHHHHHHHTTC
T ss_pred ecCCHHHHHHHHhcCCccccc-CC--HHHH-HHccCC---CHHHHHHHHHHhcCCCEEEEEecCCHHHHHHHHHHHHHhC
Confidence 4567788888888886 6762 22 2323 233 32 1257788999888778876543222 24566677776
Q ss_pred CCeee-ecCCCChhHHHHHHHhcCCCCcEEee-cCCHHHHHHHHHhCCCEEEEe-cCCCCCchHHHHHHHHHhhcceecc
Q 037779 115 VDYVD-ESEVLTPADEENHINKHNFRVPFVCG-CRNLGESLRRIREGAAMIRTK-GEAGTGNIVEAVRHVRSVMGDIRVL 191 (310)
Q Consensus 115 ad~v~-~~~~~~~~~~~~~~~~~~~~l~v~~~-v~t~~ea~~a~~~Gad~I~v~-g~~~~~~~~~~~~~~~~~~~~~~~l 191 (310)
-..++ ++....--...+.+.++| +.+-+. +-++.++..|.++||+||.+. |+..
T Consensus 79 ~nv~IKIP~T~eGl~A~~~L~~~G--I~vn~TlifS~~Qa~~Aa~AGa~yISPfvgRi~--------------------- 135 (212)
T 3r8r_A 79 PNITVKIPMTSDGLKAVRALTDLG--IKTNVTLIFNANQALLAARAGATYVSPFLGRLD--------------------- 135 (212)
T ss_dssp TTEEEEEESSHHHHHHHHHHHHTT--CCEEEEEECSHHHHHHHHHHTCSEEEEBHHHHH---------------------
T ss_pred CCEEEEeCCCHHHHHHHHHHHHCC--CcEEEEEeCCHHHHHHHHHcCCeEEEeccchhh---------------------
Confidence 55544 544322224455555544 444333 678999999999999999875 4311
Q ss_pred cccCchhHHhhhccCCCcHHHHHHHHhcC-CCCEEEEccCCCCCHHHHHHHHHcCCCEEEEcccccc
Q 037779 192 RNMDDDEVFTFAKNIAAPYDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 192 ~~~~~d~~~~~~~~~~~~~~l~~~i~~~~-~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~ 257 (310)
....|++ ..-.++....+... +.-| + ...+.++.++.++..+|||.+-+.-.+++
T Consensus 136 -d~~~dG~-------~~v~~i~~~~~~~~~~t~i--l-aAS~R~~~~v~~~a~~G~d~~Tip~~vl~ 191 (212)
T 3r8r_A 136 -DIGHNGL-------DLISEVKQIFDIHGLDTQI--I-AASIRHPQHVTEAALRGAHIGTMPLKVIH 191 (212)
T ss_dssp -HTTSCHH-------HHHHHHHHHHHHHTCCCEE--E-EBSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred -hcCCChH-------HHHHHHHHHHHHcCCCCEE--E-EecCCCHHHHHHHHHcCCCEEEcCHHHHH
Confidence 0011111 00122222233322 2233 3 46788999999999999999999887665
No 249
>1aw2_A Triosephosphate isomerase; psychrophilic, vibrio marinus; 2.65A {Moritella marina} SCOP: c.1.1.1 PDB: 1aw1_A
Probab=95.79 E-value=0.051 Score=48.39 Aligned_cols=42 Identities=24% Similarity=0.375 Sum_probs=34.5
Q ss_pred CCEEEEccCCCCCHHHHHHHHHc-CCCEEEEccccccCCCHHHHHH
Q 037779 222 LPVVHFAAGGVATPADAAMMMQL-GCDGVFVGSGVFKSGDPVRRAR 266 (310)
Q Consensus 222 iPVv~ia~GGI~t~~di~~~~~~-GadgV~VGsai~~~~dp~~~~~ 266 (310)
++| +..|+++ ++|+.++++. ++||++||++-.+++++...++
T Consensus 207 vrI--lYGGSV~-~~N~~~l~~~~diDG~LVGgAsL~a~~F~~Ii~ 249 (256)
T 1aw2_A 207 VVI--QYGGSVK-PENAAAYFAQPDIDGALVGGAALDAKSFAAIAK 249 (256)
T ss_dssp CEE--EECSCCC-TTTHHHHTTSTTCCEEEESGGGGCHHHHHHHHH
T ss_pred ccE--EEcCCCC-HHHHHHHHcCCCCCeeeecHHHhChHHHHHHHH
Confidence 677 6799995 8999999987 9999999999999666554444
No 250
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=95.72 E-value=0.57 Score=40.70 Aligned_cols=193 Identities=16% Similarity=0.175 Sum_probs=113.8
Q ss_pred cCCCHHHHHHHHHcCC-cEEEecccccchhhhcC---CCCCCCChHHHHHHHhhcCcceEeecccc----chHHHHHHHH
Q 037779 41 DVVTPEQARIAEEAGA-CAVMALERVPADIRAQG---GVARMSDPQLIKQIKSSVTIPVMAKARIG----HFVEAQILEA 112 (310)
Q Consensus 41 ~~~~~~~a~~~~~~Ga-~~I~~l~~~~~d~r~~~---G~~~~~~~~~i~~i~~~~~lPv~~kd~i~----~~~~~~~~~~ 112 (310)
+..+.+..+.+.+.|. +++. =| |+=.+ +. |. .-.+.+++|++.++-||.....-. ...+++.+.+
T Consensus 6 DtAn~~ei~~~~~~g~i~GVT-TN--Psli~-k~~~~g~---~~~~~~~ei~~~v~G~Vs~EV~a~d~e~mi~eA~~L~~ 78 (223)
T 3s1x_A 6 DTANIDEIRTGVNWGIVDGVT-TN--PTLIS-KEAVNGK---KYGDIIREILKIVDGPVSVEVVSTKYEGMVEEARKIHG 78 (223)
T ss_dssp ECCCHHHHHHHHHHTCCCEEE-CC--HHHHH-HHSCTTC---CHHHHHHHHHHHCSSCEEEECCCCSHHHHHHHHHHHHH
T ss_pred ecCCHHHHHHHHhcCCccccc-CC--HHHHH-hhhccCC---CHHHHHHHHHHhCCCCEEEEEccCCHHHHHHHHHHHHH
Confidence 4557788888888885 7762 22 22221 22 21 125678889888877887753322 2356677777
Q ss_pred cCCCeee-ecCCCChhHHHHHHHhcCCCCcEEee-cCCHHHHHHHHHhCCCEEEEe-cCCCCCchHHHHHHHHHhhccee
Q 037779 113 IGVDYVD-ESEVLTPADEENHINKHNFRVPFVCG-CRNLGESLRRIREGAAMIRTK-GEAGTGNIVEAVRHVRSVMGDIR 189 (310)
Q Consensus 113 aGad~v~-~~~~~~~~~~~~~~~~~~~~l~v~~~-v~t~~ea~~a~~~Gad~I~v~-g~~~~~~~~~~~~~~~~~~~~~~ 189 (310)
.+-..++ ++....--...+.+.+++ +.+-+. +-++.++..|.++||+||.+. |+..
T Consensus 79 ~~~nv~IKIP~T~eGl~A~~~L~~~G--I~vn~TlifS~~QA~~Aa~AGa~yISPfvgRi~------------------- 137 (223)
T 3s1x_A 79 LGDNAVVKIPMTEDGLRAIKTLSSEH--INTNCTLVFNPIQALLAAKAGVTYVSPFVGRLD------------------- 137 (223)
T ss_dssp TCTTEEEEEESSHHHHHHHHHHHHTT--CCEEEEEECSHHHHHHHHHTTCSEEEEBSHHHH-------------------
T ss_pred hCCCEEEEeCCCHHHHHHHHHHHHCC--CcEEEEEeCCHHHHHHHHHcCCeEEEeecchHh-------------------
Confidence 7755544 544322224455555544 444333 678999999999999999875 4311
Q ss_pred cccccCchhHHhhhccCCCcHHHHHHHHhcC-CCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccC--CCHH--HH
Q 037779 190 VLRNMDDDEVFTFAKNIAAPYDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKS--GDPV--RR 264 (310)
Q Consensus 190 ~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~-~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~--~dp~--~~ 264 (310)
....|++ ..-.++....+... +..| + ...+.++.++.++..+|||.+-+.-.+++. .+|. ..
T Consensus 138 ---d~g~dG~-------~~v~~i~~~~~~~~~~T~I--l-aAS~Rn~~~v~~aa~~G~d~~Tip~~vl~~l~~hpltd~~ 204 (223)
T 3s1x_A 138 ---DIGEDGM-------QIIDMIRTIFNNYIIKTQI--L-VASIRNPIHVLRSAVIGADVVTVPFNVLKSLMKHPKTDEG 204 (223)
T ss_dssp ---HTTSCTH-------HHHHHHHHHHHHTTCCSEE--E-EBSCCSHHHHHHHHHHTCSEEEECHHHHHHTTCCHHHHHH
T ss_pred ---hcCCCHH-------HHHHHHHHHHHHcCCCCEE--E-EEeCCCHHHHHHHHHcCCCEEEeCHHHHHHHHcCCcHHHH
Confidence 0011111 00122222233322 2234 3 466889999999999999999999877753 2443 45
Q ss_pred HHHHHHHHHc
Q 037779 265 ARAIVQAVTN 274 (310)
Q Consensus 265 ~~~~~~~~~~ 274 (310)
++.|.+-+++
T Consensus 205 ~~~F~~Dw~~ 214 (223)
T 3s1x_A 205 LAKFLEDWKK 214 (223)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6677766654
No 251
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=95.68 E-value=0.012 Score=53.04 Aligned_cols=82 Identities=12% Similarity=0.168 Sum_probs=58.0
Q ss_pred CCHHHH--HHHHHcCCc---EEEecccccchhhhcCCCCCCCChHHHHHHHhhc--CcceEeeccccchHHHHHHHHcCC
Q 037779 43 VTPEQA--RIAEEAGAC---AVMALERVPADIRAQGGVARMSDPQLIKQIKSSV--TIPVMAKARIGHFVEAQILEAIGV 115 (310)
Q Consensus 43 ~~~~~a--~~~~~~Ga~---~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~--~lPv~~kd~i~~~~~~~~~~~aGa 115 (310)
.+++.+ .+|..+|++ .+.+| |... +..+.+.++++++.+ ++|+++..+|.+.++++.+.++||
T Consensus 181 ~~~e~A~~~aYa~~gad~G~~lV~L-----D~~~-----~~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aGA 250 (286)
T 3vk5_A 181 STASTEEIDRYLHVARAFGFHMVYL-----YSRN-----EHVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSGA 250 (286)
T ss_dssp CCSSSHHHHHHHHHHHHTTCSEEEE-----ECSS-----SCCCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHcCCCEEEE-----cCCC-----CcCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcCC
Confidence 345555 666666554 34466 3321 355689999999999 899999999988889999999999
Q ss_pred Ceee-ecCCCCh--hHHHHHHH
Q 037779 116 DYVD-ESEVLTP--ADEENHIN 134 (310)
Q Consensus 116 d~v~-~~~~~~~--~~~~~~~~ 134 (310)
|.|. .+..... +++++.+.
T Consensus 251 D~VVVGSAav~d~~Pelv~e~a 272 (286)
T 3vk5_A 251 DYVGFAGALEQPDWRSALAEIA 272 (286)
T ss_dssp SEEEESGGGSSTTHHHHHHHHH
T ss_pred CEEEECchhhcCCCHHHHHHHH
Confidence 9998 5544444 45554443
No 252
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=95.67 E-value=0.26 Score=47.41 Aligned_cols=79 Identities=14% Similarity=0.193 Sum_probs=51.1
Q ss_pred HHHHHhc-CCCCEEEEccCCCCC-HHHHHHHHHcCCCE------EEEccccccCCCHHHHHHHHHHHHHcCCC----hhh
Q 037779 213 VMQTKQL-GRLPVVHFAAGGVAT-PADAAMMMQLGCDG------VFVGSGVFKSGDPVRRARAIVQAVTNYSD----PDV 280 (310)
Q Consensus 213 ~~~i~~~-~~iPVv~ia~GGI~t-~~di~~~~~~Gadg------V~VGsai~~~~dp~~~~~~~~~~~~~~~~----~~~ 280 (310)
++.+++. .+.+++ + =||+. ..+..++++.|+|. ++||+.|++++||.+.++++.+.++..+. ...
T Consensus 185 ~~~ir~~~~~~~~l-~--PGig~qg~tp~~a~~~g~d~~~~~~livvgR~I~~A~dp~~aa~~i~~~i~~~r~~~~~~~~ 261 (453)
T 3qw4_B 185 LARVRARAPTLWFL-V--PGIGAQGGSLKASLDAGLRADGSGMLINVSRGLARAADPRAAAKELCEEINAIRFAKGASVE 261 (453)
T ss_dssp HHHHHHHCSSCCEE-E--CCSSTTCCCHHHHHHHHCCTTSCCEEEEESHHHHSCSCHHHHHHHHHHHHHHHHSCCSCCHH
T ss_pred HHHHHHhCCCCeEE-E--CCcCCCCCCHHHHHHhcCCcccCCceEecChhhccCCCHHHHHHHHHHHHHHHHhcccHHHH
Confidence 3455543 344553 3 33321 23566777788887 99999999999999999998888876432 344
Q ss_pred HHhhhhccCCceec
Q 037779 281 LAEVSCGLGEAMVG 294 (310)
Q Consensus 281 ~~~~~~~~~~~~~~ 294 (310)
+.++....|....|
T Consensus 262 ~~~~l~~~~a~~~g 275 (453)
T 3qw4_B 262 LAKALVDSHCVRFG 275 (453)
T ss_dssp HHHHHHHTTSEEES
T ss_pred HHHHHHHCCCCEEC
Confidence 44454444554444
No 253
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=95.65 E-value=0.17 Score=43.36 Aligned_cols=120 Identities=18% Similarity=0.212 Sum_probs=73.9
Q ss_pred HHHHhhcCcceEeeccccc-hHHHHHHHHcCCCeeeecC-CCChhHHHHHHHhcCCCCcEEee-cCCHHHHHHHHHhCCC
Q 037779 85 KQIKSSVTIPVMAKARIGH-FVEAQILEAIGVDYVDESE-VLTPADEENHINKHNFRVPFVCG-CRNLGESLRRIREGAA 161 (310)
Q Consensus 85 ~~i~~~~~lPv~~kd~i~~-~~~~~~~~~aGad~v~~~~-~~~~~~~~~~~~~~~~~l~v~~~-v~t~~ea~~a~~~Gad 161 (310)
..+++.-=+|++....... .+.++.+.+.|++.+-... ..+..+.++.+++ .++.+.++ +-+.+++..+.+.|+|
T Consensus 8 ~~l~~~~ii~vi~~~~~~~~~~~~~~l~~gGv~~iel~~k~~~~~~~i~~~~~--~~~~~gag~vl~~d~~~~A~~~GAd 85 (207)
T 2yw3_A 8 AVLAESRLLPLLTVRGGEDLLGLARVLEEEGVGALEITLRTEKGLEALKALRK--SGLLLGAGTVRSPKEAEAALEAGAA 85 (207)
T ss_dssp HHHHHHCEEEEECCCSCCCHHHHHHHHHHTTCCEEEEECSSTHHHHHHHHHTT--SSCEEEEESCCSHHHHHHHHHHTCS
T ss_pred HHHHhCCEEEEEeCCCHHHHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHhC--CCCEEEeCeEeeHHHHHHHHHcCCC
Confidence 3344333355554433332 2456778889999986432 1223345555544 55666665 4467889999999999
Q ss_pred EEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHH
Q 037779 162 MIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMM 241 (310)
Q Consensus 162 ~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~ 241 (310)
++... . . +.+..+..++ ..+|++ + |++|++++.++
T Consensus 86 ~v~~~-~-~--------------------------------------d~~v~~~~~~-~g~~~i-~---G~~t~~e~~~A 120 (207)
T 2yw3_A 86 FLVSP-G-L--------------------------------------LEEVAALAQA-RGVPYL-P---GVLTPTEVERA 120 (207)
T ss_dssp EEEES-S-C--------------------------------------CHHHHHHHHH-HTCCEE-E---EECSHHHHHHH
T ss_pred EEEcC-C-C--------------------------------------CHHHHHHHHH-hCCCEE-e---cCCCHHHHHHH
Confidence 98542 1 1 1223333333 246774 2 48899999999
Q ss_pred HHcCCCEEEE
Q 037779 242 MQLGCDGVFV 251 (310)
Q Consensus 242 ~~~GadgV~V 251 (310)
.+.|+|.|.+
T Consensus 121 ~~~Gad~v~~ 130 (207)
T 2yw3_A 121 LALGLSALKF 130 (207)
T ss_dssp HHTTCCEEEE
T ss_pred HHCCCCEEEE
Confidence 9999999988
No 254
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=95.49 E-value=0.046 Score=47.94 Aligned_cols=88 Identities=15% Similarity=0.077 Sum_probs=61.2
Q ss_pred ccCCCHHHHHHHHHcCCcEEEe-cccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCee
Q 037779 40 MDVVTPEQARIAEEAGACAVMA-LERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYV 118 (310)
Q Consensus 40 ~~~~~~~~a~~~~~~Ga~~I~~-l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v 118 (310)
.++.+.+.++.+.+.|++.|.. +....+..+ ....+++.++++++. ++|++....+.+.+.+..+.++|||.|
T Consensus 134 ~~v~t~eea~~a~~~Gad~Ig~~~~g~t~~~~-----~~~~~~~~i~~l~~~-~ipvIA~GGI~t~~d~~~~~~~GadgV 207 (232)
T 3igs_A 134 ADCSSVDDGLACQRLGADIIGTTMSGYTTPDT-----PEEPDLPLVKALHDA-GCRVIAEGRYNSPALAAEAIRYGAWAV 207 (232)
T ss_dssp EECCSHHHHHHHHHTTCSEEECTTTTSSSSSC-----CSSCCHHHHHHHHHT-TCCEEEESCCCSHHHHHHHHHTTCSEE
T ss_pred EeCCCHHHHHHHHhCCCCEEEEcCccCCCCCC-----CCCCCHHHHHHHHhc-CCcEEEECCCCCHHHHHHHHHcCCCEE
Confidence 4566789999999999999832 111111111 113458899999988 999999999977788888899999999
Q ss_pred e-ecCCCChhHHHHHH
Q 037779 119 D-ESEVLTPADEENHI 133 (310)
Q Consensus 119 ~-~~~~~~~~~~~~~~ 133 (310)
. ++....|.+..+.+
T Consensus 208 ~VGsal~~p~~~~~~~ 223 (232)
T 3igs_A 208 TVGSAITRLEHICGWY 223 (232)
T ss_dssp EECHHHHCHHHHHHHH
T ss_pred EEehHhcCHHHHHHHH
Confidence 8 44444455444433
No 255
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=95.45 E-value=0.073 Score=47.83 Aligned_cols=80 Identities=11% Similarity=0.149 Sum_probs=55.0
Q ss_pred HHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHcC--------CChhhH
Q 037779 210 YDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTNY--------SDPDVL 281 (310)
Q Consensus 210 ~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~~--------~~~~~~ 281 (310)
.+.++.+++..++||+. -+.|-++.++.++.++|||+|+++.+.+. ...++++.+..+.+ +++.-+
T Consensus 102 ~~~l~~ir~~v~lPvl~--kdfiid~~qv~~A~~~GAD~VlLi~a~l~----~~~l~~l~~~a~~lGl~~lvev~t~ee~ 175 (272)
T 3qja_A 102 LDDLDAVRASVSIPVLR--KDFVVQPYQIHEARAHGADMLLLIVAALE----QSVLVSMLDRTESLGMTALVEVHTEQEA 175 (272)
T ss_dssp HHHHHHHHHHCSSCEEE--ESCCCSHHHHHHHHHTTCSEEEEEGGGSC----HHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred HHHHHHHHHhCCCCEEE--CccccCHHHHHHHHHcCCCEEEEecccCC----HHHHHHHHHHHHHCCCcEEEEcCCHHHH
Confidence 45667777767899963 45555788999999999999999988775 23355666655543 233333
Q ss_pred HhhhhccCCceeccc
Q 037779 282 AEVSCGLGEAMVGID 296 (310)
Q Consensus 282 ~~~~~~~~~~~~~~~ 296 (310)
. .+...|.++.|+.
T Consensus 176 ~-~A~~~Gad~IGv~ 189 (272)
T 3qja_A 176 D-RALKAGAKVIGVN 189 (272)
T ss_dssp H-HHHHHTCSEEEEE
T ss_pred H-HHHHCCCCEEEEC
Confidence 2 3345688888876
No 256
>1tre_A Triosephosphate isomerase; intramolecular oxidoreductase; 2.60A {Escherichia coli} SCOP: c.1.1.1 PDB: 1tmh_A
Probab=95.43 E-value=0.12 Score=46.04 Aligned_cols=43 Identities=21% Similarity=0.326 Sum_probs=35.1
Q ss_pred CCCEEEEccCCCCCHHHHHHHHH-cCCCEEEEccccccCCCHHHHHH
Q 037779 221 RLPVVHFAAGGVATPADAAMMMQ-LGCDGVFVGSGVFKSGDPVRRAR 266 (310)
Q Consensus 221 ~iPVv~ia~GGI~t~~di~~~~~-~GadgV~VGsai~~~~dp~~~~~ 266 (310)
.++| +..|++ +++|+.++++ .++||++||++-.+++++...++
T Consensus 204 ~vrI--lYGGSV-~~~N~~~l~~~~diDG~LVGgAsL~a~~F~~Ii~ 247 (255)
T 1tre_A 204 QVII--QYGGSV-NASNAAELFAQPDIDGALVGGASLKADAFAVIVK 247 (255)
T ss_dssp HCEE--EECSCC-CTTTHHHHHTSTTCCEEEESGGGGCHHHHHHHHH
T ss_pred cccE--EEcCCC-CHHHHHHHHcCCCCCeeEecHHHhChHHHHHHHH
Confidence 3677 679999 5889999997 69999999999999766555544
No 257
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=95.41 E-value=0.078 Score=48.82 Aligned_cols=85 Identities=16% Similarity=0.167 Sum_probs=60.5
Q ss_pred hHHHHHHHhhcCcceEeecc-c-cchHHHHHHHHcCCCeeeec--CC--------------------C----ChhHHHHH
Q 037779 81 PQLIKQIKSSVTIPVMAKAR-I-GHFVEAQILEAIGVDYVDES--EV--------------------L----TPADEENH 132 (310)
Q Consensus 81 ~~~i~~i~~~~~lPv~~kd~-i-~~~~~~~~~~~aGad~v~~~--~~--------------------~----~~~~~~~~ 132 (310)
.+.++.+++ +++||++|.. . .+.+.++.+.++|+|+|..+ -. . +..+.+..
T Consensus 171 ~~~i~~vr~-~~~Pv~vK~v~~g~~~e~a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~ 249 (332)
T 1vcf_A 171 VERLAELLP-LPFPVMVKEVGHGLSREAALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILE 249 (332)
T ss_dssp HHHHHHHCS-CSSCEEEECSSSCCCHHHHHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHH
T ss_pred HHHHHHHHc-CCCCEEEEecCCCCCHHHHHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHH
Confidence 578899999 9999999942 1 24567888899999999732 11 0 11123334
Q ss_pred HHhcCCCCcEEe--ecCCHHHHHHHHHhCCCEEEEe
Q 037779 133 INKHNFRVPFVC--GCRNLGESLRRIREGAAMIRTK 166 (310)
Q Consensus 133 ~~~~~~~l~v~~--~v~t~~ea~~a~~~Gad~I~v~ 166 (310)
+.+.-.++++++ ++++.+++.+++.+|||.|.+.
T Consensus 250 v~~~~~~ipvia~GGI~~~~d~~kal~~GAd~V~ig 285 (332)
T 1vcf_A 250 VREVLPHLPLVASGGVYTGTDGAKALALGADLLAVA 285 (332)
T ss_dssp HHHHCSSSCEEEESSCCSHHHHHHHHHHTCSEEEEC
T ss_pred HHHhcCCCeEEEECCCCCHHHHHHHHHhCCChHhhh
Confidence 433212577777 5999999999999999999985
No 258
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=95.36 E-value=0.052 Score=47.50 Aligned_cols=88 Identities=16% Similarity=0.075 Sum_probs=61.2
Q ss_pred ccCCCHHHHHHHHHcCCcEEEe-cccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCee
Q 037779 40 MDVVTPEQARIAEEAGACAVMA-LERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYV 118 (310)
Q Consensus 40 ~~~~~~~~a~~~~~~Ga~~I~~-l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v 118 (310)
.++.+.+.++.+.+.|++.|.. +....+..+ ....+++.++++++. ++|++....+.+.+.+..+.++|||.|
T Consensus 134 ~~v~t~eea~~a~~~Gad~Ig~~~~g~t~~~~-----~~~~~~~li~~l~~~-~ipvIA~GGI~t~~d~~~~~~~GadgV 207 (229)
T 3q58_A 134 ADCSTVNEGISCHQKGIEFIGTTLSGYTGPIT-----PVEPDLAMVTQLSHA-GCRVIAEGRYNTPALAANAIEHGAWAV 207 (229)
T ss_dssp EECSSHHHHHHHHHTTCSEEECTTTTSSSSCC-----CSSCCHHHHHHHHTT-TCCEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred EecCCHHHHHHHHhCCCCEEEecCccCCCCCc-----CCCCCHHHHHHHHHc-CCCEEEECCCCCHHHHHHHHHcCCCEE
Confidence 4566789999999999999832 111111001 113457889999988 999999999987788888899999999
Q ss_pred e-ecCCCChhHHHHHH
Q 037779 119 D-ESEVLTPADEENHI 133 (310)
Q Consensus 119 ~-~~~~~~~~~~~~~~ 133 (310)
. ++....|....+.+
T Consensus 208 ~VGsai~~p~~~~~~f 223 (229)
T 3q58_A 208 TVGSAITRIEHICQWF 223 (229)
T ss_dssp EECHHHHCHHHHHHHH
T ss_pred EEchHhcChHHHHHHH
Confidence 8 44444455444443
No 259
>2ffc_A Orotidine 5-monophosphate decarboxylase; PV-PF10_0225, SGC, structural genomics, struc genomics consortium, lyase; HET: U5P; 1.70A {Plasmodium vivax} SCOP: c.1.2.3 PDB: 2guu_A*
Probab=95.34 E-value=0.23 Score=46.16 Aligned_cols=58 Identities=28% Similarity=0.389 Sum_probs=43.2
Q ss_pred HHHHHhc-CCCCEEEEccCCCCC-HHHHHHHHHcCCC------EEEEccccccCCCHHHHHHHHHHHHH
Q 037779 213 VMQTKQL-GRLPVVHFAAGGVAT-PADAAMMMQLGCD------GVFVGSGVFKSGDPVRRARAIVQAVT 273 (310)
Q Consensus 213 ~~~i~~~-~~iPVv~ia~GGI~t-~~di~~~~~~Gad------gV~VGsai~~~~dp~~~~~~~~~~~~ 273 (310)
+..+++. .+.+++ .-||+. ..|..++++.|+| -++||++|+++.||.+.++++++.+.
T Consensus 280 l~~IR~~~~~~~iL---tPGIgaqGGD~~~a~~~Gad~~~~~~iIvVGR~I~~A~dp~~AA~~i~~ei~ 345 (353)
T 2ffc_A 280 IKKIRELFPDCYIL---APGVGAQKGDLRKMLCNGYSKNYEKVLINVGRAITKSGSPQQAAREYHQQIK 345 (353)
T ss_dssp HHHHHHHCTTCCEE---ECCBSTTCBCHHHHHHHHCCSSGGGEEEEECHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCeEE---eCcccCCCCCHHHHHHcCCCcccCcEEEEECHHHcCCCCHHHHHHHHHHHHH
Confidence 3444443 345654 377741 2456677888998 89999999999999999999999886
No 260
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=95.33 E-value=1.5 Score=39.48 Aligned_cols=173 Identities=18% Similarity=0.215 Sum_probs=95.8
Q ss_pred cCCCHHHHHHHHHcCCcEEEecccccch--hhhcCCC--CCCCC----hHHHHHHHhhcCcceEeeccc--cc----hHH
Q 037779 41 DVVTPEQARIAEEAGACAVMALERVPAD--IRAQGGV--ARMSD----PQLIKQIKSSVTIPVMAKARI--GH----FVE 106 (310)
Q Consensus 41 ~~~~~~~a~~~~~~Ga~~I~~l~~~~~d--~r~~~G~--~~~~~----~~~i~~i~~~~~lPv~~kd~i--~~----~~~ 106 (310)
.+.|+-.|+.++++|+++|- + ++ .-.-.|- ...-. ...++.|++.+++||++..-. +. ...
T Consensus 21 ~a~D~~sA~~~~~aG~~ai~-v----s~~~~a~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~~~~~ 95 (290)
T 2hjp_A 21 AAHNPLVAKLAEQAGFGGIW-G----SGFELSASYAVPDANILSMSTHLEMMRAIASTVSIPLIADIDTGFGNAVNVHYV 95 (290)
T ss_dssp ECSSHHHHHHHHHHTCSEEE-E----CHHHHHHHTTSCTTTCSCHHHHHHHHHHHHTTCSSCEEEECTTTTSSHHHHHHH
T ss_pred cCCCHHHHHHHHHcCCCEEE-E----ChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCHHHHHHH
Confidence 45678889999999999982 2 11 1000121 01111 234567778889998874222 32 234
Q ss_pred HHHHHHcCCCeeeecCC----------------CChhHHHHHHHh---c--CCCCcEEeecCCH------HHH----HHH
Q 037779 107 AQILEAIGVDYVDESEV----------------LTPADEENHINK---H--NFRVPFVCGCRNL------GES----LRR 155 (310)
Q Consensus 107 ~~~~~~aGad~v~~~~~----------------~~~~~~~~~~~~---~--~~~l~v~~~v~t~------~ea----~~a 155 (310)
+..+.++||.+|.+-+. .+..+....++. . ..+..+..-+... +++ +..
T Consensus 96 v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~ai~Ra~ay 175 (290)
T 2hjp_A 96 VPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVEALIAGLGQQEAVRRGQAY 175 (290)
T ss_dssp HHHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTTTTTCCHHHHHHHHHHH
T ss_pred HHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHhhccccHHHHHHHHHHH
Confidence 56677799999983221 122233444432 1 1334455443332 333 334
Q ss_pred HHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCC--CCEEEEccCCCC
Q 037779 156 IREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGR--LPVVHFAAGGVA 233 (310)
Q Consensus 156 ~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~--iPVv~ia~GGI~ 233 (310)
.++|||.|.+.+. + .+.+.++.+.+..+ +|+++-...+ .
T Consensus 176 ~eAGAd~i~~e~~-------------------------------------~-~~~~~~~~i~~~~~~~vP~i~n~~~~-~ 216 (290)
T 2hjp_A 176 EEAGADAILIHSR-------------------------------------Q-KTPDEILAFVKSWPGKVPLVLVPTAY-P 216 (290)
T ss_dssp HHTTCSEEEECCC-------------------------------------C-SSSHHHHHHHHHCCCSSCEEECGGGC-T
T ss_pred HHcCCcEEEeCCC-------------------------------------C-CCHHHHHHHHHHcCCCCCEEEeccCC-C
Confidence 4678888777531 0 11234455555555 8985321111 1
Q ss_pred CHHHHHHHHHcC-CCEEEEccccccC
Q 037779 234 TPADAAMMMQLG-CDGVFVGSGVFKS 258 (310)
Q Consensus 234 t~~di~~~~~~G-adgV~VGsai~~~ 258 (310)
.-...++.++| +.-|..|...+++
T Consensus 217 -~~~~~eL~~lG~v~~v~~~~~~~ra 241 (290)
T 2hjp_A 217 -QLTEADIAALSKVGIVIYGNHAIRA 241 (290)
T ss_dssp -TSCHHHHHTCTTEEEEEECSHHHHH
T ss_pred -CCCHHHHHhcCCeeEEEechHHHHH
Confidence 12568889999 9999999998874
No 261
>2jgq_A Triosephosphate isomerase; glycolysis, pentose shunt, gluconeogenesis, lipid synthesis, fatty acid biosynthesis; HET: QGA; 2.3A {Helicobacter pylori}
Probab=95.33 E-value=0.11 Score=45.49 Aligned_cols=40 Identities=20% Similarity=0.415 Sum_probs=32.3
Q ss_pred CCCEEEEccCCCCCHHHHHHHHH-cCCCEEEEccccccCCCHHH
Q 037779 221 RLPVVHFAAGGVATPADAAMMMQ-LGCDGVFVGSGVFKSGDPVR 263 (310)
Q Consensus 221 ~iPVv~ia~GGI~t~~di~~~~~-~GadgV~VGsai~~~~dp~~ 263 (310)
.++| +..|+| +++++.+++. .++||++||++-++++++..
T Consensus 188 ~vrI--lYGGSV-~~~N~~~l~~~~diDG~LVGgAsl~a~~f~~ 228 (233)
T 2jgq_A 188 KTPL--LYGGSV-NTQNAKEILGIDSVDGLLIGSASWELENFKT 228 (233)
T ss_dssp TSCE--EEESSC-CTTTHHHHHTSTTCCEEEESGGGGSHHHHHH
T ss_pred CCcE--EEcCCc-ChhhHHHHhcCCCCCeeEecHHHhChHHHHH
Confidence 5788 679999 5889888885 69999999999998655443
No 262
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=95.30 E-value=0.61 Score=43.05 Aligned_cols=169 Identities=14% Similarity=0.082 Sum_probs=94.6
Q ss_pred HHHHHHHHcCCcEEEecc--ccc-chhhhcCCCCCCCChHHHHHHHhh-cCcceEeec--cccchHHHHHHHHcCCCeee
Q 037779 46 EQARIAEEAGACAVMALE--RVP-ADIRAQGGVARMSDPQLIKQIKSS-VTIPVMAKA--RIGHFVEAQILEAIGVDYVD 119 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~--~~~-~d~r~~~G~~~~~~~~~i~~i~~~-~~lPv~~kd--~i~~~~~~~~~~~aGad~v~ 119 (310)
++++.+.++|++.|-.-. ..| .++.+ |.......+.++++++. .+.|+.+-. ..+..+.++.+.++|+|.+.
T Consensus 34 ~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~--g~~~~~~~e~l~~i~~~~~~~~i~~l~~p~~~~~~~i~~a~~aGvd~v~ 111 (345)
T 1nvm_A 34 AIARALDKAKVDSIEVAHGDGLQGSSFNY--GFGRHTDLEYIEAVAGEISHAQIATLLLPGIGSVHDLKNAYQAGARVVR 111 (345)
T ss_dssp HHHHHHHHHTCSEEECSCTTSTTCCBTTT--BCCSSCHHHHHHHHHTTCSSSEEEEEECBTTBCHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHcCCCEEEEecCCCCCCCCCcc--cCCCCCHHHHHHHHHhhCCCCEEEEEecCCcccHHHHHHHHhCCcCEEE
Confidence 679999999999982210 000 01111 22233456778888765 366665431 12234678888999999987
Q ss_pred ecCCC----ChhHHHHHHHhcCCCCcEEee---cCCHHH----HHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcce
Q 037779 120 ESEVL----TPADEENHINKHNFRVPFVCG---CRNLGE----SLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDI 188 (310)
Q Consensus 120 ~~~~~----~~~~~~~~~~~~~~~l~v~~~---v~t~~e----a~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~ 188 (310)
+.... ...+.++.+++++..+.+.++ -.+++. ++.+.+.|++.|.+....+..
T Consensus 112 I~~~~s~~~~~~~~i~~ak~~G~~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~i~l~DT~G~~---------------- 175 (345)
T 1nvm_A 112 VATHCTEADVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESYGATCIYMADSGGAM---------------- 175 (345)
T ss_dssp EEEETTCGGGGHHHHHHHHHHTCEEEEEEESTTSSCHHHHHHHHHHHHHHTCSEEEEECTTCCC----------------
T ss_pred EEEeccHHHHHHHHHHHHHHCCCEEEEEEEeCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCcc----------------
Confidence 43221 234555666666554444431 123442 334556788888775322211
Q ss_pred ecccccCchhHHhhhccCCCcHHHHHHHHhcC--CCCEEEEc----cCCCCCHHHHHHHHHcCCCEEEE
Q 037779 189 RVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLG--RLPVVHFA----AGGVATPADAAMMMQLGCDGVFV 251 (310)
Q Consensus 189 ~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~--~iPVv~ia----~GGI~t~~di~~~~~~GadgV~V 251 (310)
.++. ..++++.+++.. ++|+- . .-|.. ..+...++++||+.|=.
T Consensus 176 ------~P~~----------v~~lv~~l~~~~~~~~pi~--~H~Hn~~G~a-vAn~laA~~aGa~~vd~ 225 (345)
T 1nvm_A 176 ------SMND----------IRDRMRAFKAVLKPETQVG--MHAHHNLSLG-VANSIVAVEEGCDRVDA 225 (345)
T ss_dssp ------CHHH----------HHHHHHHHHHHSCTTSEEE--EECBCTTSCH-HHHHHHHHHTTCCEEEE
T ss_pred ------CHHH----------HHHHHHHHHHhcCCCceEE--EEECCCccHH-HHHHHHHHHcCCCEEEe
Confidence 1110 245566666654 56662 1 13764 78888889999887643
No 263
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=95.28 E-value=1.2 Score=40.55 Aligned_cols=175 Identities=17% Similarity=0.128 Sum_probs=95.2
Q ss_pred cCCCHHHHHHHHHcCCcEEEecccccch-hh-hcCCC--CCCCCh----HHHHHHHhhc-CcceEeecccc--ch----H
Q 037779 41 DVVTPEQARIAEEAGACAVMALERVPAD-IR-AQGGV--ARMSDP----QLIKQIKSSV-TIPVMAKARIG--HF----V 105 (310)
Q Consensus 41 ~~~~~~~a~~~~~~Ga~~I~~l~~~~~d-~r-~~~G~--~~~~~~----~~i~~i~~~~-~lPv~~kd~i~--~~----~ 105 (310)
.+.|.-.|+.++++|++++-.-- + .- ...|- ...-.. ..++.|++.+ ++||++..-.+ .. .
T Consensus 24 ~a~D~~sA~l~e~aGf~ai~vsG----~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~~PviaD~d~Gyg~~~~v~~ 99 (302)
T 3fa4_A 24 GVYDGLSARVALSAGFDALYMTG----AGTAASVHGQADLGICTLNDMRANAEMISNISPSTPVIADADTGYGGPIMVAR 99 (302)
T ss_dssp EECSHHHHHHHHTTTCSCEEECH----HHHHHHHHSCCSSSCCCHHHHHHHHHHHHTTSTTSCEEEECTTTTSSHHHHHH
T ss_pred cCcCHHHHHHHHHcCCCEEEeCc----HHHHHHHcCCCCCCcCCHHHHHHHHHHHHhhccCCCEEEECCCCCCCHHHHHH
Confidence 56778899999999999973200 0 00 00111 111112 2345666654 89998853222 22 3
Q ss_pred HHHHHHHcCCCeeeecCC--------------CChhHHHHHHHh-------cCCCCcEEeecCCH-----HHH----HHH
Q 037779 106 EAQILEAIGVDYVDESEV--------------LTPADEENHINK-------HNFRVPFVCGCRNL-----GES----LRR 155 (310)
Q Consensus 106 ~~~~~~~aGad~v~~~~~--------------~~~~~~~~~~~~-------~~~~l~v~~~v~t~-----~ea----~~a 155 (310)
.+..+.++||.+|.+-+. .+.++....++. .+.++.+++-+... +|+ +..
T Consensus 100 tv~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~Ra~ay 179 (302)
T 3fa4_A 100 TTEQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIARTDSLQTHGYEESVARLRAA 179 (302)
T ss_dssp HHHHHHHTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECCHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEEEEecccccCCHHHHHHHHHHH
Confidence 356677899999983222 133344444432 13445555555443 222 223
Q ss_pred HHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcC-CCCEEE-EccCCCC
Q 037779 156 IREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLG-RLPVVH-FAAGGVA 233 (310)
Q Consensus 156 ~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~-~iPVv~-ia~GGI~ 233 (310)
.++|||.|.+.+. . +.+.++.+.+.. ..|+++ +..+|-.
T Consensus 180 ~eAGAD~ifi~g~--------------------------------------~-~~~ei~~~~~~~~~~Pl~~n~~~~g~~ 220 (302)
T 3fa4_A 180 RDAGADVGFLEGI--------------------------------------T-SREMARQVIQDLAGWPLLLNMVEHGAT 220 (302)
T ss_dssp HTTTCSEEEETTC--------------------------------------C-CHHHHHHHHHHTTTSCEEEECCTTSSS
T ss_pred HHcCCCEEeecCC--------------------------------------C-CHHHHHHHHHHhcCCceeEEEecCCCC
Confidence 3567777766532 1 122334444432 467743 2345532
Q ss_pred CHHHHHHHHHcCCCEEEEccccccC
Q 037779 234 TPADAAMMMQLGCDGVFVGSGVFKS 258 (310)
Q Consensus 234 t~~di~~~~~~GadgV~VGsai~~~ 258 (310)
..-...++.++|+.-|+.+..++++
T Consensus 221 p~~~~~eL~~lGv~~v~~~~~~~ra 245 (302)
T 3fa4_A 221 PSISAAEAKEMGFRIIIFPFAALGP 245 (302)
T ss_dssp CCCCHHHHHHHTCSEEEETTTTHHH
T ss_pred CCCCHHHHHHcCCCEEEEchHHHHH
Confidence 1235788889999999999988873
No 264
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=95.25 E-value=0.094 Score=46.76 Aligned_cols=71 Identities=24% Similarity=0.268 Sum_probs=55.6
Q ss_pred CCHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHh-hcC-cceEeeccccchHHHHHHHHcCCCeee
Q 037779 43 VTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKS-SVT-IPVMAKARIGHFVEAQILEAIGVDYVD 119 (310)
Q Consensus 43 ~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~-~~~-lPv~~kd~i~~~~~~~~~~~aGad~v~ 119 (310)
.|++.++.+++.|+++|+.+ +..+ ..| .-..+++.++.+++ ..+ +||++-.+|++.+++..+.++|||.|+
T Consensus 133 ~D~~~ak~l~~~G~~aVmPl---g~pI--GsG-~Gi~~~~~L~~i~~~~~~~vPVI~~GGI~tpsDAa~AmeLGAdgVl 205 (268)
T 2htm_A 133 PDLVLAKRLAALGTATVMPL---AAPI--GSG-WGVRTRALLELFAREKASLPPVVVDAGLGLPSHAAEVMELGLDAVL 205 (268)
T ss_dssp SCHHHHHHHHHHTCSCBEEB---SSST--TTC-CCSTTHHHHHHHHHTTTTSSCBEEESCCCSHHHHHHHHHTTCCEEE
T ss_pred CCHHHHHHHHhcCCCEEEec---CccC--cCC-cccCCHHHHHHHHHhcCCCCeEEEeCCCCCHHHHHHHHHcCCCEEE
Confidence 46899999999999998654 1111 111 12346888999998 678 999999899888889999999999988
No 265
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=95.24 E-value=1.5 Score=38.66 Aligned_cols=175 Identities=14% Similarity=0.034 Sum_probs=96.2
Q ss_pred cCCCHHHHHHHHHcCCcEE-EecccccchhhhcCCCCCCCChHHHHHHH---hhcCcceEeeccccchHHHHHHHHcCCC
Q 037779 41 DVVTPEQARIAEEAGACAV-MALERVPADIRAQGGVARMSDPQLIKQIK---SSVTIPVMAKARIGHFVEAQILEAIGVD 116 (310)
Q Consensus 41 ~~~~~~~a~~~~~~Ga~~I-~~l~~~~~d~r~~~G~~~~~~~~~i~~i~---~~~~lPv~~kd~i~~~~~~~~~~~aGad 116 (310)
...+++.++.+...|+|++ .+++..|.+ .+..+... +..+.|++++..-.+...++.+..+|++
T Consensus 26 ~v~~p~~~e~a~~~gaD~v~lDlEd~p~~------------~~~a~~~~~~~~~~~~~~~VRv~~~~~~~i~~~l~~g~~ 93 (256)
T 1dxe_A 26 ALSNPISTEVLGLAGFDWLVLDGEHAPND------------ISTFIPQLMALKGSASAPVVRVPTNEPVIIKRLLDIGFY 93 (256)
T ss_dssp CSCSHHHHHHHTTSCCSEEEEESSSSSCC------------HHHHHHHHHHTTTCSSEEEEECSSSCHHHHHHHHHTTCC
T ss_pred eCCCHHHHHHHHhCCCCEEEEcCCCCCCC------------HHHHHHHHHHHHhCCCcEEEECCCCCHHHHHHHHhcCCc
Confidence 4567999999999999987 334221222 22222222 2245667666433333446777789999
Q ss_pred eeeecCCCChhHHHHHHHhcC-----------------------------CCCcEEeecCCHHHHHHHHH----hCCCEE
Q 037779 117 YVDESEVLTPADEENHINKHN-----------------------------FRVPFVCGCRNLGESLRRIR----EGAAMI 163 (310)
Q Consensus 117 ~v~~~~~~~~~~~~~~~~~~~-----------------------------~~l~v~~~v~t~~ea~~a~~----~Gad~I 163 (310)
.|..+...++.++........ ..+.+++-+.|++-+..+.+ .|.|.+
T Consensus 94 gI~~P~V~s~~ev~~~~~~~~~~p~g~Rg~~~~~~~~~~g~~~~~~~~~~~~~~v~~~IEt~~av~~~~eIa~~~~vd~l 173 (256)
T 1dxe_A 94 NFLIPFVETKEEAELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGVDNVDAIAATEGVDGI 173 (256)
T ss_dssp EEEESCCCSHHHHHHHHHTTSCTTTCCCCCCSSSGGGGGGTSTTHHHHHTTSCEEEEEECSHHHHHTHHHHHTSTTCCEE
T ss_pred eeeecCcCCHHHHHHHHHHhcCCCCCccCCCcchhhhhcCchHHHHHhcCcccEEEEEECCHHHHHhHHHHhCCCCCCEE
Confidence 998877767777655443311 12556666777764433322 267777
Q ss_pred EEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHh---cCCCCEEEEccCCCCCHHHHHH
Q 037779 164 RTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQ---LGRLPVVHFAAGGVATPADAAM 240 (310)
Q Consensus 164 ~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~---~~~iPVv~ia~GGI~t~~di~~ 240 (310)
.+... +...+++. ......+ .-...+..+.. ...+|+.++ .+ +++.+..
T Consensus 174 ~iG~~----------DL~~~lg~-----~~~~~~p---------~v~~a~~~iv~aa~a~G~~~~v~--~~--d~~~~~~ 225 (256)
T 1dxe_A 174 FVGPS----------DLAAALGH-----LGNASHP---------DVQKAIQHIFNRASAHGKPSGIL--AP--VEADARR 225 (256)
T ss_dssp EECHH----------HHHHHTTC-----TTCTTSH---------HHHHHHHHHHHHHHHTTCCEEEE--CC--SHHHHHH
T ss_pred EEChH----------HHHHHhCC-----CCCCCCH---------HHHHHHHHHHHHHHHhCCceEEe--cC--CHHHHHH
Confidence 76411 11111110 0000000 01122222221 246777533 22 6999999
Q ss_pred HHHcCCCEEEEcccc
Q 037779 241 MMQLGCDGVFVGSGV 255 (310)
Q Consensus 241 ~~~~GadgV~VGsai 255 (310)
+++.|++.+.+|+-.
T Consensus 226 ~~~~G~~~~s~~~d~ 240 (256)
T 1dxe_A 226 YLEWGATFVAVGSDL 240 (256)
T ss_dssp HHHTTCCEEEEEEHH
T ss_pred HHHcCCCEEEechHH
Confidence 999999999999843
No 266
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=95.11 E-value=1.5 Score=39.72 Aligned_cols=92 Identities=15% Similarity=0.152 Sum_probs=51.5
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCCh---HHHHHHHhhc--CcceEeeccccc----hHHHHHHHHcCCC
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDP---QLIKQIKSSV--TIPVMAKARIGH----FVEAQILEAIGVD 116 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~---~~i~~i~~~~--~lPv~~kd~i~~----~~~~~~~~~aGad 116 (310)
+.++.+.+.|+++|..+. .| +-+..+... +.++.+.+.+ ++||++...-.. .+.++.+.++|||
T Consensus 40 ~lv~~li~~Gv~gi~v~G--tt-----GE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gad 112 (304)
T 3l21_A 40 RLANHLVDQGCDGLVVSG--TT-----GESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAH 112 (304)
T ss_dssp HHHHHHHHTTCSEEEESS--TT-----TTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHcCCCEEEeCc--cc-----cchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCC
Confidence 678889999999985441 01 000112222 2344444443 589998754332 2456777889999
Q ss_pred eee-ecCC---CChhHHHHHHHh--cCCCCcEEe
Q 037779 117 YVD-ESEV---LTPADEENHINK--HNFRVPFVC 144 (310)
Q Consensus 117 ~v~-~~~~---~~~~~~~~~~~~--~~~~l~v~~ 144 (310)
+++ .+.. .+.+.+.+.++. ...++++++
T Consensus 113 avlv~~P~y~~~s~~~l~~~f~~va~a~~lPiil 146 (304)
T 3l21_A 113 GLLVVTPYYSKPPQRGLQAHFTAVADATELPMLL 146 (304)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHTSCSSCEEE
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Confidence 988 3322 245566666654 223455443
No 267
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=95.10 E-value=1.3 Score=40.02 Aligned_cols=166 Identities=13% Similarity=-0.003 Sum_probs=88.0
Q ss_pred HHHHHHHHcCCcEEEecccc-cchhhhcCCCCCCCCh-HHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeeeecCC
Q 037779 46 EQARIAEEAGACAVMALERV-PADIRAQGGVARMSDP-QLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVDESEV 123 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~-~~d~r~~~G~~~~~~~-~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~~~~~ 123 (310)
++++.+.+.|++.|-..-++ |.....+ .+. +.++.+++..++|+.+.. ...+.++.+.++|++.|.+...
T Consensus 34 ~i~~~L~~~Gv~~IE~g~~~~~~~~~~~------~d~~~~~~~~~~~~~~~~~~l~--~~~~~i~~a~~aG~~~v~i~~~ 105 (302)
T 2ftp_A 34 RLVDDLSAAGLDYIEVGSFVSPKWVPQM------AGSAEVFAGIRQRPGVTYAALA--PNLKGFEAALESGVKEVAVFAA 105 (302)
T ss_dssp HHHHHHHHTTCSEEEEEECSCTTTCGGG------TTHHHHHHHSCCCTTSEEEEEC--CSHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHcCcCEEEECCCcCccccccc------cCHHHHHHHhhhcCCCEEEEEe--CCHHHHHHHHhCCcCEEEEEEe
Confidence 67999999999988332111 1112211 112 334555544466665433 2446788899999999874221
Q ss_pred CCh------------------hHHHHHHHhcCCCCcEEee---------cCCHHHHHH----HHHhCCCEEEEecCCCCC
Q 037779 124 LTP------------------ADEENHINKHNFRVPFVCG---------CRNLGESLR----RIREGAAMIRTKGEAGTG 172 (310)
Q Consensus 124 ~~~------------------~~~~~~~~~~~~~l~v~~~---------v~t~~ea~~----a~~~Gad~I~v~g~~~~~ 172 (310)
.+. .+.++.+++++..+...+. -.+++++.+ +.+.|+|.+.+--..+.
T Consensus 106 ~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~DT~G~- 184 (302)
T 2ftp_A 106 ASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCYEVSLGDTIGV- 184 (302)
T ss_dssp SCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTTCSEEEEEESSSC-
T ss_pred cCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCC-
Confidence 121 2233334443322211111 134554433 23567776665310000
Q ss_pred chHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcC-CCCEEEEc--cCCCCCHHHHHHHHHcCCCEE
Q 037779 173 NIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLG-RLPVVHFA--AGGVATPADAAMMMQLGCDGV 249 (310)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~-~iPVv~ia--~GGI~t~~di~~~~~~GadgV 249 (310)
..+. ...++++.+++.. ++|+.+=. ..|.. ..+...++++|++-|
T Consensus 185 ---------------------~~P~----------~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla-~An~laAv~aGa~~v 232 (302)
T 2ftp_A 185 ---------------------GTAG----------ATRRLIEAVASEVPRERLAGHFHDTYGQA-LANIYASLLEGIAVF 232 (302)
T ss_dssp ---------------------CCHH----------HHHHHHHHHTTTSCGGGEEEEEBCTTSCH-HHHHHHHHHTTCCEE
T ss_pred ---------------------cCHH----------HHHHHHHHHHHhCCCCeEEEEeCCCccHH-HHHHHHHHHhCCCEE
Confidence 0110 1255666666654 47776444 58884 788999999999977
Q ss_pred EEc
Q 037779 250 FVG 252 (310)
Q Consensus 250 ~VG 252 (310)
=+.
T Consensus 233 d~t 235 (302)
T 2ftp_A 233 DSS 235 (302)
T ss_dssp EEB
T ss_pred Eec
Confidence 653
No 268
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=95.09 E-value=0.29 Score=44.15 Aligned_cols=85 Identities=11% Similarity=0.142 Sum_probs=50.1
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCC-------hHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCee
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSD-------PQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYV 118 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~-------~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v 118 (310)
+.++.+.+.||+.| +++...|.+ |+..... ...++.+++.+++|+++..+ ..+-++.+.++|++.|
T Consensus 42 ~~a~~~v~~GAdiI-DIGgestrP----ga~~v~~~eE~~rv~pvi~~l~~~~~~piSIDT~--~~~va~aAl~aGa~iI 114 (282)
T 1aj0_A 42 KHANLMINAGATII-DVGGESTRP----GAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTS--KPEVIRESAKVGAHII 114 (282)
T ss_dssp HHHHHHHHHTCSEE-EEESSCCST----TCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECC--CHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHCCCCEE-EECCCcCCC----CCCcCCHHHHHHHHHHHHHHHHhhcCCeEEEeCC--CHHHHHHHHHcCCCEE
Confidence 67899999999998 664212211 1111111 22344555556899988654 3366778888999999
Q ss_pred e-ecCCCChhHHHHHHHhcCC
Q 037779 119 D-ESEVLTPADEENHINKHNF 138 (310)
Q Consensus 119 ~-~~~~~~~~~~~~~~~~~~~ 138 (310)
- ++.. ..++....+.+++.
T Consensus 115 Ndvsg~-~d~~~~~~~a~~~~ 134 (282)
T 1aj0_A 115 NDIRSL-SEPGALEAAAETGL 134 (282)
T ss_dssp EETTTT-CSTTHHHHHHHHTC
T ss_pred EECCCC-CCHHHHHHHHHhCC
Confidence 7 3322 34455555555443
No 269
>1mo0_A TIM, triosephosphate isomerase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; 1.70A {Caenorhabditis elegans} SCOP: c.1.1.1
Probab=95.05 E-value=0.12 Score=46.42 Aligned_cols=42 Identities=24% Similarity=0.247 Sum_probs=33.4
Q ss_pred CCCEEEEccCCCCCHHHHHHHHH-cCCCEEEEccccccCCCHHHHH
Q 037779 221 RLPVVHFAAGGVATPADAAMMMQ-LGCDGVFVGSGVFKSGDPVRRA 265 (310)
Q Consensus 221 ~iPVv~ia~GGI~t~~di~~~~~-~GadgV~VGsai~~~~dp~~~~ 265 (310)
.++| +..|+| +++++.+++. .++||++||++-.+++++...+
T Consensus 222 ~vrI--LYGGSV-~~~N~~el~~~~diDG~LVGgASLka~~F~~Ii 264 (275)
T 1mo0_A 222 ATRI--IYGGSV-TADNAAELGKKPDIDGFLVGGASLKPDFVKIIN 264 (275)
T ss_dssp HSCE--EEESSC-CTTTHHHHTTSTTCCEEEESGGGGSTHHHHHHH
T ss_pred cccE--EEcCCC-CHhhHHHHhcCCCCCeeEechHHhChHHHHHHH
Confidence 3688 579999 5899988885 6999999999999976554443
No 270
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=95.03 E-value=1.3 Score=39.73 Aligned_cols=98 Identities=12% Similarity=0.041 Sum_probs=54.3
Q ss_pred cCCCHHHHHHHHHcCCcEEEecccccchhhhcCCC--CCCCChH----HHHHHHhhc-CcceEeeccc---cchHH----
Q 037779 41 DVVTPEQARIAEEAGACAVMALERVPADIRAQGGV--ARMSDPQ----LIKQIKSSV-TIPVMAKARI---GHFVE---- 106 (310)
Q Consensus 41 ~~~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~--~~~~~~~----~i~~i~~~~-~lPv~~kd~i---~~~~~---- 106 (310)
.+-|+-.|+.++++|++.|..--.. .....|. ...-..+ ..+.|++.+ +.||++..-. ++.+.
T Consensus 35 tayDa~sA~l~e~aG~d~ilvGdSl---~~~~lG~~dt~~vtldem~~h~~aV~r~~~~~~vvaD~pfgsY~s~~~a~~~ 111 (275)
T 3vav_A 35 TCYDASFAALLDRANVDVQLIGDSL---GNVLQGQTTTLPVTLDDIAYHTACVARAQPRALIVADLPFGTYGTPADAFAS 111 (275)
T ss_dssp ECCSHHHHHHHHHTTCSEEEECTTH---HHHTTCCSSSTTCCHHHHHHHHHHHHHTCCSSEEEEECCTTSCSSHHHHHHH
T ss_pred eCcCHHHHHHHHHcCCCEEEECcHH---HHHHcCCCCCCccCHHHHHHHHHHHHhcCCCCCEEEecCCCCCCCHHHHHHH
Confidence 4567889999999999998432000 0001111 1111222 345677777 4778775322 22222
Q ss_pred HHHHHHcCCCeeeecCCCChhHHHHHHHhcCCCCcEE
Q 037779 107 AQILEAIGVDYVDESEVLTPADEENHINKHNFRVPFV 143 (310)
Q Consensus 107 ~~~~~~aGad~v~~~~~~~~~~~~~~~~~~~~~l~v~ 143 (310)
+..+.++||+.|.+-+...+.+.++.+.+. +++++
T Consensus 112 a~rl~kaGa~aVklEdg~~~~~~i~~l~~~--GIpv~ 146 (275)
T 3vav_A 112 AVKLMRAGAQMVKFEGGEWLAETVRFLVER--AVPVC 146 (275)
T ss_dssp HHHHHHTTCSEEEEECCGGGHHHHHHHHHT--TCCEE
T ss_pred HHHHHHcCCCEEEECCchhHHHHHHHHHHC--CCCEE
Confidence 345566899999844443456667777654 34443
No 271
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=95.03 E-value=0.091 Score=49.43 Aligned_cols=85 Identities=15% Similarity=0.128 Sum_probs=62.3
Q ss_pred ChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeeeecC--C------CChhHHHHHHHhcCCCCcEEe--ecCCH
Q 037779 80 DPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVDESE--V------LTPADEENHINKHNFRVPFVC--GCRNL 149 (310)
Q Consensus 80 ~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~~~~--~------~~~~~~~~~~~~~~~~l~v~~--~v~t~ 149 (310)
+.+.++.+++.+++||++|. +.+.+.++.+.++|+|.|..+. . .+..+.+..+.+. .+.++++ ++++.
T Consensus 213 ~~~~i~~i~~~~~~Pv~vkg-v~t~e~a~~a~~aGad~I~vs~~gg~~~d~~~~~~~~l~~v~~~-~~~pVia~GGI~~~ 290 (380)
T 1p4c_A 213 NWEALRWLRDLWPHKLLVKG-LLSAEDADRCIAEGADGVILSNHGGRQLDCAISPMEVLAQSVAK-TGKPVLIDSGFRRG 290 (380)
T ss_dssp CHHHHHHHHHHCCSEEEEEE-ECCHHHHHHHHHTTCSEEEECCGGGTSCTTCCCGGGTHHHHHHH-HCSCEEECSSCCSH
T ss_pred cHHHHHHHHHhcCCCEEEEe-cCcHHHHHHHHHcCCCEEEEcCCCCCcCCCCcCHHHHHHHHHHH-cCCeEEEECCCCCH
Confidence 46788999999999999985 4456788999999999987421 1 1122344444431 2346666 48999
Q ss_pred HHHHHHHHhCCCEEEEe
Q 037779 150 GESLRRIREGAAMIRTK 166 (310)
Q Consensus 150 ~ea~~a~~~Gad~I~v~ 166 (310)
+++.+++.+|||.+.+.
T Consensus 291 ~dv~kal~~GAdaV~iG 307 (380)
T 1p4c_A 291 SDIVKALALGAEAVLLG 307 (380)
T ss_dssp HHHHHHHHTTCSCEEES
T ss_pred HHHHHHHHhCCcHhheh
Confidence 99999999999999985
No 272
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=94.95 E-value=0.26 Score=48.32 Aligned_cols=114 Identities=24% Similarity=0.298 Sum_probs=75.6
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhc-CcceEeeccccchHHHHHHHHcCCCeeee---
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSV-TIPVMAKARIGHFVEAQILEAIGVDYVDE--- 120 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~-~lPv~~kd~i~~~~~~~~~~~aGad~v~~--- 120 (310)
.+-++++.++|++.| ++ |.. .|.. ..-.+.++.+++.. ++||++.... +.+.++.+..+|||.|..
T Consensus 283 ~eR~~aLv~AGvD~i-vi-----D~a--hGhs-~~v~~~i~~ik~~~p~~~viaGNVa-T~e~a~~Li~aGAD~vkVGiG 352 (556)
T 4af0_A 283 KDRLKLLAEAGLDVV-VL-----DSS--QGNS-VYQIEFIKWIKQTYPKIDVIAGNVV-TREQAAQLIAAGADGLRIGMG 352 (556)
T ss_dssp HHHHHHHHHTTCCEE-EE-----CCS--CCCS-HHHHHHHHHHHHHCTTSEEEEEEEC-SHHHHHHHHHHTCSEEEECSS
T ss_pred HHHHHHHHhcCCcEE-EE-----ecc--cccc-HHHHHHHHHHHhhCCcceEEecccc-CHHHHHHHHHcCCCEEeecCC
Confidence 367999999999988 44 222 1221 11256778888776 7888776544 446788899999999861
Q ss_pred c-C--------CCChhHH--HHHHH-h-cCCCCcEEee--cCCHHHHHHHHHhCCCEEEEecC
Q 037779 121 S-E--------VLTPADE--ENHIN-K-HNFRVPFVCG--CRNLGESLRRIREGAAMIRTKGE 168 (310)
Q Consensus 121 ~-~--------~~~~~~~--~~~~~-~-~~~~l~v~~~--v~t~~ea~~a~~~Gad~I~v~g~ 168 (310)
+ . ....+++ +..+. . +..+++++++ +++.-++.+|+.+|||+|++.+.
T Consensus 353 pGSiCtTr~v~GvG~PQ~tAi~~~a~~a~~~~vpvIADGGI~~sGDi~KAlaaGAd~VMlGsl 415 (556)
T 4af0_A 353 SGSICITQEVMAVGRPQGTAVYAVAEFASRFGIPCIADGGIGNIGHIAKALALGASAVMMGGL 415 (556)
T ss_dssp CSTTBCCTTTCCSCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTT
T ss_pred CCcccccccccCCCCcHHHHHHHHHHHHHHcCCCEEecCCcCcchHHHHHhhcCCCEEEEchh
Confidence 1 0 0111222 11121 1 3467889885 89999999999999999998643
No 273
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=94.91 E-value=0.056 Score=46.42 Aligned_cols=92 Identities=20% Similarity=0.175 Sum_probs=59.5
Q ss_pred cCCCHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeee-
Q 037779 41 DVVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVD- 119 (310)
Q Consensus 41 ~~~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~- 119 (310)
++.+++.++.+.+.|++.|..-++..++.. +.+.....+.+.++++++.+++|+++...+.+.+.+..+.++|||.+.
T Consensus 125 ~~~t~~e~~~~~~~G~d~i~~~~~g~t~~~-~~~~~~~~~~~~~~~~~~~~~ipvia~GGI~~~~~~~~~~~~Gad~v~v 203 (223)
T 1y0e_A 125 DIATVEEAKNAARLGFDYIGTTLHGYTSYT-QGQLLYQNDFQFLKDVLQSVDAKVIAEGNVITPDMYKRVMDLGVHCSVV 203 (223)
T ss_dssp ECSSHHHHHHHHHTTCSEEECTTTTSSTTS-TTCCTTHHHHHHHHHHHHHCCSEEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred cCCCHHHHHHHHHcCCCEEEeCCCcCcCCC-CCCCCCcccHHHHHHHHhhCCCCEEEecCCCCHHHHHHHHHcCCCEEEE
Confidence 445677888899999999853322122211 111001123567888888889999999998766788888899999997
Q ss_pred ecCCCChhHHHHHH
Q 037779 120 ESEVLTPADEENHI 133 (310)
Q Consensus 120 ~~~~~~~~~~~~~~ 133 (310)
.+....+....+.+
T Consensus 204 G~al~~p~~~~~~~ 217 (223)
T 1y0e_A 204 GGAITRPKEITKRF 217 (223)
T ss_dssp CHHHHCHHHHHHHH
T ss_pred ChHHcCcHHHHHHH
Confidence 44433444444443
No 274
>2yc6_A Triosephosphate isomerase; glycolysis; HET: PGA; 1.45A {Giardia intestinalis} PDB: 2dp3_A 2yc7_A* 3pf3_A 2yc8_A
Probab=94.91 E-value=0.56 Score=41.68 Aligned_cols=36 Identities=19% Similarity=0.375 Sum_probs=31.5
Q ss_pred CCCEEEEccCCCCCHHHHHHHHHc-CCCEEEEccccccCC
Q 037779 221 RLPVVHFAAGGVATPADAAMMMQL-GCDGVFVGSGVFKSG 259 (310)
Q Consensus 221 ~iPVv~ia~GGI~t~~di~~~~~~-GadgV~VGsai~~~~ 259 (310)
.++| +..|++ +++|+.++++. ++||++||++-++++
T Consensus 208 ~vrI--lYGGSV-~~~N~~~l~~~~diDG~LVGgAsL~a~ 244 (257)
T 2yc6_A 208 HIRI--IYGGSA-NGSNNEKLGQCPNIDGFLVGGASLKPE 244 (257)
T ss_dssp TCEE--EEESSC-CTTTHHHHHTSTTCCEEEESGGGGSTH
T ss_pred cceE--EEcCcc-CHHHHHHHHcCCCCCeeeecHHHHHHH
Confidence 5777 679999 58999999987 999999999999865
No 275
>1r2r_A TIM, triosephosphate isomerase; closed loop conformation in the ligand-free state, conformational heterogeneity, TIM-barrel; 1.50A {Oryctolagus cuniculus} SCOP: c.1.1.1 PDB: 1r2s_A 1r2t_A 2jk2_A 1wyi_A 1hti_A 2vom_A 1tph_1* 8tim_A 1sw3_A 1spq_A 1tpb_1* 1tpw_A* 1sw7_A 1tpu_A* 1tpc_1* 1ssd_A 1ssg_A 1sw0_A 1sq7_A 1tpv_A* ...
Probab=94.90 E-value=0.12 Score=45.72 Aligned_cols=39 Identities=23% Similarity=0.265 Sum_probs=32.1
Q ss_pred CCCEEEEccCCCCCHHHHHHHHH-cCCCEEEEccccccCCCHH
Q 037779 221 RLPVVHFAAGGVATPADAAMMMQ-LGCDGVFVGSGVFKSGDPV 262 (310)
Q Consensus 221 ~iPVv~ia~GGI~t~~di~~~~~-~GadgV~VGsai~~~~dp~ 262 (310)
.++| +..|++ +++++.+++. .++||++||++-++++++.
T Consensus 203 ~vrI--lYGGSV-~~~N~~~l~~~~diDG~LVGgAsL~a~~F~ 242 (248)
T 1r2r_A 203 STRI--IYGGSV-TGATCKELASQPDVDGFLVGGASLKPEFVD 242 (248)
T ss_dssp HCCE--EECSCC-CTTTHHHHHTSTTCCEEEESGGGGSTHHHH
T ss_pred cccE--EEcCCc-CHhHHHHHHcCCCCCeeEechHHhChHHHH
Confidence 3688 569999 5899988885 6999999999999966544
No 276
>1o5x_A TIM, triosephosphate isomerase; 2- phosphoglycerate, META-phosphate, catalytic LOOP6; HET: 2PG; 1.10A {Plasmodium falciparum} SCOP: c.1.1.1 PDB: 1lzo_A 1m7o_A* 1m7p_A* 1lyx_A* 1ydv_A 2vfi_A* 3psw_A 3psv_A 3pwa_A 2vfh_A* 2vff_A 2vfg_A* 1vga_A 1woa_A* 1wob_A 3pvf_A 3py2_A 2vfd_A 2vfe_A*
Probab=94.88 E-value=0.24 Score=43.78 Aligned_cols=42 Identities=21% Similarity=0.413 Sum_probs=35.4
Q ss_pred CCCEEEEccCCCCCHHHHHHHHH-cCCCEEEEccccccCCCHHHHHH
Q 037779 221 RLPVVHFAAGGVATPADAAMMMQ-LGCDGVFVGSGVFKSGDPVRRAR 266 (310)
Q Consensus 221 ~iPVv~ia~GGI~t~~di~~~~~-~GadgV~VGsai~~~~dp~~~~~ 266 (310)
.++| +..|++ +++|+.++++ .++||++||++-.+ +++...++
T Consensus 203 ~vrI--lYGGSV-~~~N~~~l~~~~diDG~LVGgAsL~-~~F~~ii~ 245 (248)
T 1o5x_A 203 QIRI--LYGGSV-NTENCSSLIQQEDIDGFLVGNASLK-ESFVDIIK 245 (248)
T ss_dssp HSEE--EECSCC-CTTTHHHHHTSTTCCEEEECGGGGS-TTHHHHHH
T ss_pred cceE--EEcCCC-CHHHHHHHHcCCCCCeeEeeHHHHH-HHHHHHHH
Confidence 3677 679999 5889999997 79999999999999 88776554
No 277
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=94.87 E-value=2.2 Score=38.76 Aligned_cols=174 Identities=14% Similarity=0.101 Sum_probs=105.7
Q ss_pred HHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEee-ccccchHHHHHHHHc--------CCCe
Q 037779 47 QARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAK-ARIGHFVEAQILEAI--------GVDY 117 (310)
Q Consensus 47 ~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~k-d~i~~~~~~~~~~~a--------Gad~ 117 (310)
..+++++.++..|.++- +...++.++. -...++.+.+..++||.++ |.-..++.+..+.++ |-+.
T Consensus 43 vl~AAee~~sPvIlq~s--~g~~~y~g~~----~~~~~~~~A~~~~VPVaLHlDHg~~~e~i~~ai~~~~~~~~~~GFtS 116 (306)
T 3pm6_A 43 IIRAAEHKRSPAMILLF--PWAIQYADSL----LVRTAASACRAASVPITLHLDHAQDPEIIKRAADLSRSETHEPGFDS 116 (306)
T ss_dssp HHHHHHHTTCCEEEEEC--HHHHHHHTTH----HHHHHHHHHHHCSSCEEEEEEEECCHHHHHHHHHTC------CCCSE
T ss_pred HHHHHHHhCCCEEEEcC--hhHHhhccHH----HHHHHHHHHHHCCCCEEEEcCCCCCHHHHHHHHHhhhhccCCCCCCE
Confidence 46777788888876651 1112222221 1344555666689999886 333345677778888 9888
Q ss_pred eeec-CCCChh-------HHHHHHHhcCCCCcEEe--------------------ecCCHHHHHHHHHhCCCEEEEe-cC
Q 037779 118 VDES-EVLTPA-------DEENHINKHNFRVPFVC--------------------GCRNLGESLRRIREGAAMIRTK-GE 168 (310)
Q Consensus 118 v~~~-~~~~~~-------~~~~~~~~~~~~l~v~~--------------------~v~t~~ea~~a~~~Gad~I~v~-g~ 168 (310)
|-++ +.++.+ ++++.+++.+ +.+=+ ..++++|+.+..+.|+|.+.+. |.
T Consensus 117 VMiDgS~~p~eENi~~Tk~vv~~ah~~g--vsVEaElG~igG~Edgv~~~~~~~~~yT~Peea~~Fv~TgvD~LAvaiGt 194 (306)
T 3pm6_A 117 IMVDMSHFSKEENLRLTRELVAYCNARG--IATEAEPGRIEGGEDGVQDTVDLEGVLTTPEESEEFVATGINWLAPAFGN 194 (306)
T ss_dssp EEECCTTSCHHHHHHHHHHHHHHHHTTT--CEEEECSSBCCCCBTTBCCCTTCCCBCCCHHHHHHHHTTTCSEECCCSSC
T ss_pred EEEeCCCCCHHHHHHHHHHHHHHHHHcC--CeEEEEeeeeccccCCccccccccccCCCHHHHHHHHHcCCCEEEEEcCc
Confidence 7633 223333 2333333322 21111 1357889988778899988664 33
Q ss_pred CCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcC--CCCEEEEccCCCCCHHHHHHHHHcCC
Q 037779 169 AGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLG--RLPVVHFAAGGVATPADAAMMMQLGC 246 (310)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~--~iPVv~ia~GGI~t~~di~~~~~~Ga 246 (310)
.++. ++. . ...-++++++.+.+.. ++|+|.=-++|+ ..+++++++++|.
T Consensus 195 ~HG~------------------Yk~--~--------~p~Ld~~~L~~I~~~v~~~vpLVlHGgSG~-p~e~i~~ai~~GV 245 (306)
T 3pm6_A 195 VHGN------------------YGP--R--------GVQLDYERLQRINEAVGERVGLVLHGADPF-TKEIFEKCIERGV 245 (306)
T ss_dssp CSSC------------------CCT--T--------CCCCCHHHHHHHHHHHTTTSEEEECSCTTC-CHHHHHHHHHTTE
T ss_pred cccC------------------cCC--C--------CCccCHHHHHHHHHHhCCCCCEEeeCCCCC-CHHHHHHHHHcCC
Confidence 3221 000 0 0122578888887764 699876555677 4788999999999
Q ss_pred CEEEEcccccc
Q 037779 247 DGVFVGSGVFK 257 (310)
Q Consensus 247 dgV~VGsai~~ 257 (310)
.-|=++|.+..
T Consensus 246 ~KiNi~Tdl~~ 256 (306)
T 3pm6_A 246 AKVNVNRAVNN 256 (306)
T ss_dssp EEEEESHHHHH
T ss_pred eEEEeChHHHH
Confidence 99999997653
No 278
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A
Probab=94.84 E-value=0.13 Score=48.64 Aligned_cols=33 Identities=15% Similarity=0.327 Sum_probs=29.3
Q ss_pred EEccCCCCCHHHHHHHHHcCCCEEEEccccccCC
Q 037779 226 HFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSG 259 (310)
Q Consensus 226 ~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~ 259 (310)
++++||| +++++.++.+.|+|.+.||+.++..+
T Consensus 273 I~aSggl-~~~~i~~l~~~GvD~~gvGt~l~~~~ 305 (398)
T 2i1o_A 273 IMVSGGL-DENTVKKLREAGAEAFGVGTSISSAK 305 (398)
T ss_dssp EEEESSC-CHHHHHHHHHTTCCEEEECHHHHTCC
T ss_pred EEEeCCC-CHHHHHHHHHcCCCEEEeCcccCCCC
Confidence 3789999 69999999999999999999888643
No 279
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=94.82 E-value=0.52 Score=43.14 Aligned_cols=117 Identities=19% Similarity=0.169 Sum_probs=74.4
Q ss_pred cCcceEeeccc--cchHHHHHHHHcCCCeeeecCCCChhHHHHHHHh-cC-CCCcEEee--c--CC-HHHHHHHHHhCCC
Q 037779 91 VTIPVMAKARI--GHFVEAQILEAIGVDYVDESEVLTPADEENHINK-HN-FRVPFVCG--C--RN-LGESLRRIREGAA 161 (310)
Q Consensus 91 ~~lPv~~kd~i--~~~~~~~~~~~aGad~v~~~~~~~~~~~~~~~~~-~~-~~l~v~~~--v--~t-~~ea~~a~~~Gad 161 (310)
...|++.-.+- .+.+.+..+..+|+-.++.....+++.+.+.+++ .. .+.++.+. + .+ .+.+..+.+.|+|
T Consensus 25 ~~~Pii~apM~gvs~~~la~av~~aGglG~i~~~~~~~~~l~~~i~~i~~~~~~p~gVnl~~~~~~~~~~~~~~~~~g~d 104 (326)
T 3bo9_A 25 IEHPILMGGMAWAGTPTLAAAVSEAGGLGIIGSGAMKPDDLRKAISELRQKTDKPFGVNIILVSPWADDLVKVCIEEKVP 104 (326)
T ss_dssp CSSSEEECCCTTTSCHHHHHHHHHTTSBEEEECTTCCHHHHHHHHHHHHTTCSSCEEEEEETTSTTHHHHHHHHHHTTCS
T ss_pred CCCCEEECCCCCCCCHHHHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHhcCCCEEEEEeccCCCHHHHHHHHHHCCCC
Confidence 46788775433 3556777888899877765544567666555544 21 22344443 2 12 3445566788999
Q ss_pred EEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHH
Q 037779 162 MIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMM 241 (310)
Q Consensus 162 ~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~ 241 (310)
+|.+++. .+.++++.+++. .+||+ .++.+++++.++
T Consensus 105 ~V~l~~g---------------------------------------~p~~~~~~l~~~-g~~v~----~~v~s~~~a~~a 140 (326)
T 3bo9_A 105 VVTFGAG---------------------------------------NPTKYIRELKEN-GTKVI----PVVASDSLARMV 140 (326)
T ss_dssp EEEEESS---------------------------------------CCHHHHHHHHHT-TCEEE----EEESSHHHHHHH
T ss_pred EEEECCC---------------------------------------CcHHHHHHHHHc-CCcEE----EEcCCHHHHHHH
Confidence 9887621 123445555553 46663 367889999999
Q ss_pred HHcCCCEEEE
Q 037779 242 MQLGCDGVFV 251 (310)
Q Consensus 242 ~~~GadgV~V 251 (310)
.+.|+|+|++
T Consensus 141 ~~~GaD~i~v 150 (326)
T 3bo9_A 141 ERAGADAVIA 150 (326)
T ss_dssp HHTTCSCEEE
T ss_pred HHcCCCEEEE
Confidence 9999999999
No 280
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=94.78 E-value=2.2 Score=38.44 Aligned_cols=83 Identities=17% Similarity=0.229 Sum_probs=47.0
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCCh---HHHHHHHhhc--CcceEeeccccc----hHHHHHHHHcCCC
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDP---QLIKQIKSSV--TIPVMAKARIGH----FVEAQILEAIGVD 116 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~---~~i~~i~~~~--~lPv~~kd~i~~----~~~~~~~~~aGad 116 (310)
+.++.+.+.|+++|..+- .| +-+..+... +.++.+.+.+ ++||++...-.. .+.++.+.++|||
T Consensus 37 ~lv~~li~~Gv~gl~v~G--tT-----GE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gad 109 (301)
T 1xky_A 37 KLVNYLIDNGTTAIVVGG--TT-----GESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVD 109 (301)
T ss_dssp HHHHHHHHTTCCEEEESS--TT-----TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEECc--cc-----cChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCC
Confidence 678888999999985441 01 001112222 2344444443 589998754432 2455677789999
Q ss_pred eee-ecCC---CChhHHHHHHHh
Q 037779 117 YVD-ESEV---LTPADEENHINK 135 (310)
Q Consensus 117 ~v~-~~~~---~~~~~~~~~~~~ 135 (310)
+++ .+.. .+.+.+.+.++.
T Consensus 110 avlv~~P~y~~~s~~~l~~~f~~ 132 (301)
T 1xky_A 110 AVMLVAPYYNKPSQEGMYQHFKA 132 (301)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHH
T ss_pred EEEEcCCCCCCCCHHHHHHHHHH
Confidence 987 3322 244555555544
No 281
>2j27_A Triosephosphate isomerase glycosomal; TIM, 2PG, LOOP7, glycosome, TIM-barrel, gluconeogenesis, lipid synthesis, atomic resolution; 1.15A {Trypanosoma brucei brucei} PDB: 2j24_A 1kv5_A 1tpe_A 1tsi_A* 3tim_A 2v2c_A 2v0t_A 1tri_A 1tti_A 1mss_A 1ttj_A* 2wsq_A 2y70_A 2y6z_A* 1ml1_A 2wsr_A 3q37_A 2v2h_A 2v2d_A 1dkw_A ...
Probab=94.74 E-value=0.28 Score=43.48 Aligned_cols=42 Identities=24% Similarity=0.385 Sum_probs=35.0
Q ss_pred CCCEEEEccCCCCCHHHHHHHH-HcCCCEEEEccccccCCCHHHHHH
Q 037779 221 RLPVVHFAAGGVATPADAAMMM-QLGCDGVFVGSGVFKSGDPVRRAR 266 (310)
Q Consensus 221 ~iPVv~ia~GGI~t~~di~~~~-~~GadgV~VGsai~~~~dp~~~~~ 266 (310)
.++| +..|++ +++|+.+++ +.++||++||++-.+ +++...++
T Consensus 205 ~vrI--lYGGSV-~~~N~~~l~~~~diDG~LVGgAsL~-~~F~~ii~ 247 (250)
T 2j27_A 205 ELRI--LYGGSV-NGKNARTLYQQRDVNGFLVGGASLK-PEFVDIIK 247 (250)
T ss_dssp HCCE--EEESSC-CTTTHHHHHTSTTCCEEEESGGGGS-TTHHHHHH
T ss_pred cccE--EEcCCC-CHHHHHHHHcCCCCCeeeeehHHHH-HHHHHHHH
Confidence 3688 579999 588999999 569999999999999 88765543
No 282
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=94.67 E-value=0.015 Score=55.30 Aligned_cols=50 Identities=10% Similarity=-0.064 Sum_probs=38.0
Q ss_pred HHHHhcCCCCEEEEccCCCCCHHHHHHHHHc----CCCEEEEccccccCCCHHHHH
Q 037779 214 MQTKQLGRLPVVHFAAGGVATPADAAMMMQL----GCDGVFVGSGVFKSGDPVRRA 265 (310)
Q Consensus 214 ~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~----GadgV~VGsai~~~~dp~~~~ 265 (310)
..+++..++|| |++|||.+.+++.++++. +||.|++|++++..+|....+
T Consensus 306 ~~ir~~~~~Pv--I~~Ggi~~~~dA~~~i~~~~~g~aDlVa~GR~~iaNPdL~~ri 359 (407)
T 3tjl_A 306 EFVSKIWKGVI--LKAGNYSYDAPEFKTLKEDIADKRTLVGFSRYFTSNPNLVWKL 359 (407)
T ss_dssp HHHHHHCCSEE--EEESCGGGGTTTTHHHHHHHTTSSEEEECSHHHHHCTTHHHHH
T ss_pred HHHHHHhCCCE--EecCCCCCHHHHHHHHHhhccCCCeEEEeChhhhhCchHHHHH
Confidence 34455456798 678999877767666654 599999999999999876554
No 283
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=94.66 E-value=0.21 Score=49.32 Aligned_cols=87 Identities=25% Similarity=0.250 Sum_probs=62.3
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHHHHHH-cCCCeeeec--
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEA-IGVDYVDES-- 121 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~-aGad~v~~~-- 121 (310)
.+.++.+++.|++.|. + +++. ..|...-.+.++++++++.+++||++...+.+.+++..+.+ .|++.++..
T Consensus 455 ~e~a~~~~~~Ga~~il-~----t~~~-~dG~~~G~d~~li~~l~~~~~iPVIasGGi~s~~d~~~~~~~~G~~gvivg~a 528 (555)
T 1jvn_A 455 WELTRACEALGAGEIL-L----NCID-KDGSNSGYDLELIEHVKDAVKIPVIASSGAGVPEHFEEAFLKTRADACLGAGM 528 (555)
T ss_dssp HHHHHHHHHTTCCEEE-E----CCGG-GTTTCSCCCHHHHHHHHHHCSSCEEECSCCCSHHHHHHHHHHSCCSEEEESHH
T ss_pred HHHHHHHHHcCCCEEE-E----eCCC-CCCCCCCCCHHHHHHHHHhCCccEEEECCCCCHHHHHHHHHhcCChHHHHHHH
Confidence 5899999999999983 4 3331 22222224689999999999999999999988788877777 899998732
Q ss_pred ---CCCChhHHHHHHHhcC
Q 037779 122 ---EVLTPADEENHINKHN 137 (310)
Q Consensus 122 ---~~~~~~~~~~~~~~~~ 137 (310)
......++.+.++..+
T Consensus 529 ~~~~~~~~~e~~~~l~~~g 547 (555)
T 1jvn_A 529 FHRGEFTVNDVKEYLLEHG 547 (555)
T ss_dssp HHTTSCCHHHHHHHHHHTT
T ss_pred HHcCCCCHHHHHHHHHHCC
Confidence 2234555666555543
No 284
>2btm_A TIM, protein (triosephosphate isomerase); thermophilic triose-phosphate, glycolysis; 2.40A {Geobacillus stearothermophilus} SCOP: c.1.1.1 PDB: 1btm_A
Probab=94.65 E-value=0.13 Score=45.65 Aligned_cols=39 Identities=21% Similarity=0.386 Sum_probs=32.1
Q ss_pred CCCEEEEccCCCCCHHHHHHHH-HcCCCEEEEccccccCCCHH
Q 037779 221 RLPVVHFAAGGVATPADAAMMM-QLGCDGVFVGSGVFKSGDPV 262 (310)
Q Consensus 221 ~iPVv~ia~GGI~t~~di~~~~-~~GadgV~VGsai~~~~dp~ 262 (310)
.++| +..|++ +++|+.+++ +.++||++||++-++++++.
T Consensus 204 ~vrI--lYGGSV-~~~N~~~l~~~~diDG~LVGgAsL~a~~F~ 243 (252)
T 2btm_A 204 AIRI--QYGGSV-KPDNIRDFLAQQQIDGALVGGASLEPASFL 243 (252)
T ss_dssp TSEE--EEESSC-CTTTHHHHHTSTTCCEEEESGGGSSHHHHH
T ss_pred ceeE--EEcCCC-CHHHHHHHHcCCCCCeeEecHHHhChHHHH
Confidence 5777 679999 489999999 56999999999999854443
No 285
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=94.63 E-value=2.1 Score=38.72 Aligned_cols=82 Identities=15% Similarity=0.161 Sum_probs=46.2
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCCh---HHHHHHHhhc--CcceEeeccccc----hHHHHHHHHcCCC
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDP---QLIKQIKSSV--TIPVMAKARIGH----FVEAQILEAIGVD 116 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~---~~i~~i~~~~--~lPv~~kd~i~~----~~~~~~~~~aGad 116 (310)
+.++.+.+.|++++..+. ..+-+..+... +.++.+.+.+ ++||++...-.. .+.++.+.++|||
T Consensus 41 ~lv~~li~~Gv~gl~v~G-------ttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gad 113 (304)
T 3cpr_A 41 EVAAYLVDKGLDSLVLAG-------TTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGAD 113 (304)
T ss_dssp HHHHHHHHTTCCEEEESS-------TTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEECc-------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCC
Confidence 678889999999985441 01101112222 2344444443 589988754432 2455677789999
Q ss_pred eee-ecCC---CChhHHHHHHH
Q 037779 117 YVD-ESEV---LTPADEENHIN 134 (310)
Q Consensus 117 ~v~-~~~~---~~~~~~~~~~~ 134 (310)
+++ .+.. .+.+.+.+.++
T Consensus 114 avlv~~P~y~~~~~~~l~~~f~ 135 (304)
T 3cpr_A 114 GLLVVTPYYSKPSQEGLLAHFG 135 (304)
T ss_dssp EEEEECCCSSCCCHHHHHHHHH
T ss_pred EEEECCCCCCCCCHHHHHHHHH
Confidence 987 3322 23445555444
No 286
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=94.63 E-value=1.8 Score=39.93 Aligned_cols=86 Identities=9% Similarity=-0.013 Sum_probs=50.0
Q ss_pred cccCCCHHHHHHHHHcCCcEE-EecccccchhhhcCCCCCCCChHHHHHHHhhcC---cceEeeccccchHHHHHHHHcC
Q 037779 39 IMDVVTPEQARIAEEAGACAV-MALERVPADIRAQGGVARMSDPQLIKQIKSSVT---IPVMAKARIGHFVEAQILEAIG 114 (310)
Q Consensus 39 i~~~~~~~~a~~~~~~Ga~~I-~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~---lPv~~kd~i~~~~~~~~~~~aG 114 (310)
.....+++.++.+...|++++ .+++..+.+... -...++.+. ..+ .+++++..-.+..+++.+..+|
T Consensus 47 ~l~i~~p~~~e~a~~~GaD~vilDlEha~~~~e~--------~~~~l~a~~-~~~~~~~~~~VRv~~~~~~di~~~LdaG 117 (339)
T 1izc_A 47 AHGIPSTFVTKVLAATKPDFVWIDVEHGMFNRLE--------LHDAIHAAQ-HHSEGRSLVIVRVPKHDEVSLSTALDAG 117 (339)
T ss_dssp EECSCCHHHHHHHHHTCCSEEEEETTTSCCCHHH--------HHHHHHHHH-HHTTTCSEEEEECCTTCHHHHHHHHHHT
T ss_pred EEECCCHHHHHHHHhCCCCEEEEECCCCCCcHHH--------HHHHHHHhh-hcCCCCCeEEEEeCCCCHHHHHHHHhCC
Confidence 334567899999999999987 334311111110 012233332 123 6666653322335677788899
Q ss_pred CCeeeecCCCChhHHHHHH
Q 037779 115 VDYVDESEVLTPADEENHI 133 (310)
Q Consensus 115 ad~v~~~~~~~~~~~~~~~ 133 (310)
++.|..+...++.++....
T Consensus 118 a~gImlP~V~saee~~~~~ 136 (339)
T 1izc_A 118 AAGIVIPHVETVEEVREFV 136 (339)
T ss_dssp CSEEEETTCCCHHHHHHHH
T ss_pred CCEEEeCCCCCHHHHHHHH
Confidence 9998887776777665443
No 287
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=94.58 E-value=0.061 Score=49.21 Aligned_cols=98 Identities=17% Similarity=0.083 Sum_probs=62.6
Q ss_pred ccceeeecCCccccCCCHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHH
Q 037779 28 VGLAQMLRGGVIMDVVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEA 107 (310)
Q Consensus 28 ~~~~~~l~~g~i~~~~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~ 107 (310)
.|+..+++.|+-.. ...+.++.+.++|+++|.+-.+...+ .+.| ..+.+.++++++ ++||+++..+.+.+++
T Consensus 127 ~pv~vKir~G~~~~-~~~~~a~~l~~~G~d~i~v~g~~~~~--~~~~---~~~~~~i~~i~~--~ipVi~~GgI~s~~da 198 (318)
T 1vhn_A 127 GKFSVKTRLGWEKN-EVEEIYRILVEEGVDEVFIHTRTVVQ--SFTG---RAEWKALSVLEK--RIPTFVSGDIFTPEDA 198 (318)
T ss_dssp SEEEEEEESCSSSC-CHHHHHHHHHHTTCCEEEEESSCTTT--TTSS---CCCGGGGGGSCC--SSCEEEESSCCSHHHH
T ss_pred CCEEEEecCCCChH-HHHHHHHHHHHhCCCEEEEcCCCccc--cCCC---CcCHHHHHHHHc--CCeEEEECCcCCHHHH
Confidence 46778888775321 12489999999999998543111111 1111 234567777777 8999999988777777
Q ss_pred HHHHH-cCCCeee-ecCCCChhHHHHHH
Q 037779 108 QILEA-IGVDYVD-ESEVLTPADEENHI 133 (310)
Q Consensus 108 ~~~~~-aGad~v~-~~~~~~~~~~~~~~ 133 (310)
+.+.+ .|||.|. ....+..+++...+
T Consensus 199 ~~~l~~~gad~V~iGR~~l~~P~l~~~~ 226 (318)
T 1vhn_A 199 KRALEESGCDGLLVARGAIGRPWIFKQI 226 (318)
T ss_dssp HHHHHHHCCSEEEESGGGTTCTTHHHHH
T ss_pred HHHHHcCCCCEEEECHHHHhCcchHHHH
Confidence 76666 7999997 33333333444434
No 288
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=94.49 E-value=2.6 Score=37.90 Aligned_cols=83 Identities=20% Similarity=0.262 Sum_probs=46.6
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCCh---HHHHHHHhhc--CcceEeeccccc----hHHHHHHHHcCCC
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDP---QLIKQIKSSV--TIPVMAKARIGH----FVEAQILEAIGVD 116 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~---~~i~~i~~~~--~lPv~~kd~i~~----~~~~~~~~~aGad 116 (310)
+.++.+.+.|++++..+- .| +-+..+... +.++.+.+.+ ++||++...-.. .+.++.+.++|||
T Consensus 32 ~lv~~li~~Gv~gl~~~G--tt-----GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gad 104 (297)
T 3flu_A 32 DLIDWHIENGTDGIVAVG--TT-----GESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGAD 104 (297)
T ss_dssp HHHHHHHHTTCCEEEESS--TT-----TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEeCc--cc-----cCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCC
Confidence 678889999999985441 01 001112222 2344444443 589998754332 2456677889999
Q ss_pred eee-ecCC---CChhHHHHHHHh
Q 037779 117 YVD-ESEV---LTPADEENHINK 135 (310)
Q Consensus 117 ~v~-~~~~---~~~~~~~~~~~~ 135 (310)
+++ .+.. .+.+.+.+.++.
T Consensus 105 avlv~~P~y~~~~~~~l~~~f~~ 127 (297)
T 3flu_A 105 YTLSVVPYYNKPSQEGIYQHFKT 127 (297)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCCHHHHHHHHHH
Confidence 987 4322 234445555443
No 289
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=94.48 E-value=2.4 Score=37.52 Aligned_cols=175 Identities=13% Similarity=0.024 Sum_probs=96.5
Q ss_pred ccCCCHHHHHHHHHcCCcEE-EecccccchhhhcCCCCCCCChHHHHHHH---hhcCcceEeeccccchHHHHHHHHcCC
Q 037779 40 MDVVTPEQARIAEEAGACAV-MALERVPADIRAQGGVARMSDPQLIKQIK---SSVTIPVMAKARIGHFVEAQILEAIGV 115 (310)
Q Consensus 40 ~~~~~~~~a~~~~~~Ga~~I-~~l~~~~~d~r~~~G~~~~~~~~~i~~i~---~~~~lPv~~kd~i~~~~~~~~~~~aGa 115 (310)
....+++.++.+...|+|++ .+++..|.+ .+.++... +..+.|++++..-.+...++.+..+|+
T Consensus 24 ~~~~~p~~~e~a~~~GaD~v~lDlE~~~~~------------~~~~~~~~~a~~~~~~~~~VRv~~~~~~~i~~~l~~g~ 91 (267)
T 2vws_A 24 LSSTTAYMAEIAATSGYDWLLIDGEHAPNT------------IQDLYHQLQAVAPYASQPVIRPVEGSKPLIKQVLDIGA 91 (267)
T ss_dssp ECSCCHHHHHHHHTTCCSEEEEETTTSCCC------------HHHHHHHHHHHTTSSSEEEEECSSCCHHHHHHHHHTTC
T ss_pred EeCCCHHHHHHHHhCCCCEEEEcCCCCCCC------------HHHHHHHHHHHHhCCCcEEEEeCCCCHHHHHHHHHhCC
Confidence 34567899999999999987 334211111 22222221 223567777644334456677788999
Q ss_pred CeeeecCCCChhHHHHHHHh-cCC-----------------------------CCcEEeecCCHHHHHHHH---H-hCCC
Q 037779 116 DYVDESEVLTPADEENHINK-HNF-----------------------------RVPFVCGCRNLGESLRRI---R-EGAA 161 (310)
Q Consensus 116 d~v~~~~~~~~~~~~~~~~~-~~~-----------------------------~l~v~~~v~t~~ea~~a~---~-~Gad 161 (310)
+.|..+...+++++...... +.+ .+.+++-+.|++-+..+. . .|.|
T Consensus 92 ~~I~~P~V~s~ee~~~~~~~~~~~p~G~Rg~~~~~~~~~~~g~~~~y~~~~~~~~~v~~~IEt~~av~~~~eIa~~~gvd 171 (267)
T 2vws_A 92 QTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGID 171 (267)
T ss_dssp CEEEECCCCSHHHHHHHHHHTSCTTTSCCCSCGGGSGGGGGGTSTTHHHHHHHHCEEEEECCSHHHHHTHHHHHTSTTCC
T ss_pred CEEEeCCCCCHHHHHHHHHHHcCCCCCccccccchhhhhhcCcchhhhhhcccccEEEEEECCHHHHHHHHHHhCCCCCC
Confidence 99988777677776655433 110 145666677776443322 2 3677
Q ss_pred EEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHH---hcCCCCEEEEccCCCCCHHHH
Q 037779 162 MIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTK---QLGRLPVVHFAAGGVATPADA 238 (310)
Q Consensus 162 ~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~---~~~~iPVv~ia~GGI~t~~di 238 (310)
.+.+. + .+...+++. ..+.. .+. -...+.++. +...+|+.+. . .+++.+
T Consensus 172 ~l~iG-~---------~DL~~~lg~----~~~~~-~p~---------v~~a~~~iv~aa~aaG~~~~v~--~--~d~~~a 223 (267)
T 2vws_A 172 GVFIG-P---------ADLSASLGY----PDNAG-HPE---------VQRIIETSIRRIRAAGKAAGFL--A--VAPDMA 223 (267)
T ss_dssp EEEEC-H---------HHHHHHTTC----SSSCC-THH---------HHHHHHHHHHHHHHTTCEEEEE--C--SSHHHH
T ss_pred EEEEC-h---------HHHHHHhCC----CCCCC-CHH---------HHHHHHHHHHHHHHhCCeEEEe--c--CCHHHH
Confidence 77764 1 011111110 00000 000 011222221 1235676533 2 379999
Q ss_pred HHHHHcCCCEEEEccc
Q 037779 239 AMMMQLGCDGVFVGSG 254 (310)
Q Consensus 239 ~~~~~~GadgV~VGsa 254 (310)
..+++.|++.+.+|+-
T Consensus 224 ~~~~~~G~~~~s~~~d 239 (267)
T 2vws_A 224 QQCLAWGANFVAVGVD 239 (267)
T ss_dssp HHHHHTTCCEEEEEEH
T ss_pred HHHHHCCCCEEEEchH
Confidence 9999999999999984
No 290
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=94.48 E-value=2.5 Score=37.61 Aligned_cols=98 Identities=8% Similarity=0.037 Sum_probs=50.8
Q ss_pred cCCCHHHHHHHHHcCCcEEEecccccchhhhcCC--CCCCCChH----HHHHHHhhcCcceEeecc-cc---chHH----
Q 037779 41 DVVTPEQARIAEEAGACAVMALERVPADIRAQGG--VARMSDPQ----LIKQIKSSVTIPVMAKAR-IG---HFVE---- 106 (310)
Q Consensus 41 ~~~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G--~~~~~~~~----~i~~i~~~~~lPv~~kd~-i~---~~~~---- 106 (310)
.+-|+-.|+.++++|++.|...-. .-. ...| +...-..+ ..+.|++.++.|+++-|. .+ +.++
T Consensus 23 tayD~~sA~l~e~aG~d~ilvGds--l~~-~~lG~~dt~~vtldemi~h~~aV~r~~~~~~vvaD~pfgsy~~~~~a~~~ 99 (264)
T 1m3u_A 23 TAYDYSFAKLFADEGLNVMLVGDS--LGM-TVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADLPFMAYATPEQAFEN 99 (264)
T ss_dssp ECCSHHHHHHHHHHTCCEEEECTT--HHH-HTTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEEEECCTTSSSSHHHHHHH
T ss_pred eCcCHHHHHHHHHcCCCEEEECHH--HHH-HHcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEEEECCCCCcCCHHHHHHH
Confidence 456788999999999999843200 000 0111 11111223 345677777766555442 22 2222
Q ss_pred HHHHHHcCCCeeeecCCCChhHHHHHHHhcCCCCcEE
Q 037779 107 AQILEAIGVDYVDESEVLTPADEENHINKHNFRVPFV 143 (310)
Q Consensus 107 ~~~~~~aGad~v~~~~~~~~~~~~~~~~~~~~~l~v~ 143 (310)
+..+..+||+.|.+-+.....+.++.+... +++++
T Consensus 100 a~rl~kaGa~aVklEgg~e~~~~I~al~~a--gipV~ 134 (264)
T 1m3u_A 100 AATVMRAGANMVKIEGGEWLVETVQMLTER--AVPVC 134 (264)
T ss_dssp HHHHHHTTCSEEECCCSGGGHHHHHHHHHT--TCCEE
T ss_pred HHHHHHcCCCEEEECCcHHHHHHHHHHHHC--CCCeE
Confidence 235666999999743332233444444443 34443
No 291
>1m6j_A TIM, TPI, triosephosphate isomerase; asymmetry, monomer stability; 1.50A {Entamoeba histolytica} SCOP: c.1.1.1
Probab=94.45 E-value=0.17 Score=45.18 Aligned_cols=39 Identities=21% Similarity=0.353 Sum_probs=31.6
Q ss_pred CCCEEEEccCCCCCHHHHHHHHH-cCCCEEEEccccccCCCHH
Q 037779 221 RLPVVHFAAGGVATPADAAMMMQ-LGCDGVFVGSGVFKSGDPV 262 (310)
Q Consensus 221 ~iPVv~ia~GGI~t~~di~~~~~-~GadgV~VGsai~~~~dp~ 262 (310)
.++| +..|++ +++++.+++. .++||++||++-.+++++.
T Consensus 212 ~vrI--lYGGSV-~~~N~~~l~~~~diDG~LVGgAsL~a~~F~ 251 (261)
T 1m6j_A 212 ATRI--QYGGSV-NPANCNELAKKADIDGFLVGGASLDAAKFK 251 (261)
T ss_dssp HSCE--EECSCC-CTTTHHHHHTSTTCCEEEESGGGGSHHHHH
T ss_pred cccE--EEcCCc-CHhhHHHHhcCCCCCeeEecHHHhChHHHH
Confidence 3688 679999 5899988885 5999999999999855443
No 292
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=94.39 E-value=2.9 Score=38.02 Aligned_cols=83 Identities=18% Similarity=0.172 Sum_probs=46.8
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCCh---HHHHHHHhhc--CcceEeeccccc----hHHHHHHHHcCCC
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDP---QLIKQIKSSV--TIPVMAKARIGH----FVEAQILEAIGVD 116 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~---~~i~~i~~~~--~lPv~~kd~i~~----~~~~~~~~~aGad 116 (310)
+.++.+.+.|++++..+. ..+-+..+... +.++.+.+.+ ++||++...-.. .+.++.+.++|||
T Consensus 47 ~li~~li~~Gv~Gl~v~G-------tTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gad 119 (315)
T 3si9_A 47 NFVEWQITQGINGVSPVG-------TTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGAD 119 (315)
T ss_dssp HHHHHHHHTTCSEEECSS-------TTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEeCc-------cccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCC
Confidence 678889999999984431 00101112222 2344444443 589998754332 2455677889999
Q ss_pred eee-ecCC---CChhHHHHHHHh
Q 037779 117 YVD-ESEV---LTPADEENHINK 135 (310)
Q Consensus 117 ~v~-~~~~---~~~~~~~~~~~~ 135 (310)
+++ .+.. .+.+.+.+.++.
T Consensus 120 avlv~~P~y~~~~~~~l~~~f~~ 142 (315)
T 3si9_A 120 AVLVVTPYYNRPNQRGLYTHFSS 142 (315)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCCHHHHHHHHHH
Confidence 988 3322 234455555543
No 293
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=94.27 E-value=3.1 Score=37.83 Aligned_cols=83 Identities=18% Similarity=0.211 Sum_probs=46.5
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCCh---HHHHHHHhhc--CcceEeeccccc----hHHHHHHHHcCCC
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDP---QLIKQIKSSV--TIPVMAKARIGH----FVEAQILEAIGVD 116 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~---~~i~~i~~~~--~lPv~~kd~i~~----~~~~~~~~~aGad 116 (310)
+.++.+.+.|++++..+. .|.+ +..+... +.++.+.+.+ ++||++...-.. .+.++.+.++|||
T Consensus 48 ~lv~~li~~Gv~Gl~v~G--tTGE-----~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gad 120 (314)
T 3qze_A 48 KLVDFHLQEGTNAIVAVG--TTGE-----SATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGAD 120 (314)
T ss_dssp HHHHHHHHHTCCEEEESS--GGGT-----GGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEECc--cccC-----hhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCC
Confidence 678888999999985441 0100 0112122 2344444443 589998754432 2456677889999
Q ss_pred eee-ecCC---CChhHHHHHHHh
Q 037779 117 YVD-ESEV---LTPADEENHINK 135 (310)
Q Consensus 117 ~v~-~~~~---~~~~~~~~~~~~ 135 (310)
+++ .+.. .+.+.+.+.++.
T Consensus 121 avlv~~P~y~~~s~~~l~~~f~~ 143 (314)
T 3qze_A 121 ACLLVTPYYNKPTQEGMYQHFRH 143 (314)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHH
T ss_pred EEEEcCCCCCCCCHHHHHHHHHH
Confidence 988 3322 234455555543
No 294
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=94.26 E-value=2 Score=38.54 Aligned_cols=92 Identities=14% Similarity=0.086 Sum_probs=49.6
Q ss_pred cCCCHHHHHHHHHcCCcEEEecccccchhhhcCCC--C----CCCChHHHHHHHhhcCcceEeeccc-cc----hHH---
Q 037779 41 DVVTPEQARIAEEAGACAVMALERVPADIRAQGGV--A----RMSDPQLIKQIKSSVTIPVMAKARI-GH----FVE--- 106 (310)
Q Consensus 41 ~~~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~--~----~~~~~~~i~~i~~~~~lPv~~kd~i-~~----~~~--- 106 (310)
.+-|+-.|+.++++|++.|...-.. .....|. . ...-....+.|++.++.|+++-|.- +. .++
T Consensus 40 tayDa~sA~l~e~aG~d~ilvGdSl---~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~~ 116 (281)
T 1oy0_A 40 TAYDYSTARIFDEAGIPVLLVGDSA---ANVVYGYDTTVPISIDELIPLVRGVVRGAPHALVVADLPFGSYEAGPTAALA 116 (281)
T ss_dssp ECCSHHHHHHHHTTTCCEEEECTTH---HHHTTCCSSSSSCCGGGTHHHHHHHHHHCTTSEEEEECCTTSSTTCHHHHHH
T ss_pred eCcCHHHHHHHHHcCCCEEEECHHH---HHHHcCCCCCCCCCHHHHHHHHHHHHhcCCCCeEEEECCCCcccCCHHHHHH
Confidence 4567889999999999998432000 0000010 0 1111445677888888777765432 22 222
Q ss_pred --HHHHHHcCCCeeeecCCCChhHHHHHHHh
Q 037779 107 --AQILEAIGVDYVDESEVLTPADEENHINK 135 (310)
Q Consensus 107 --~~~~~~aGad~v~~~~~~~~~~~~~~~~~ 135 (310)
.+.+.++||+.|.+-+.....+.++.+..
T Consensus 117 na~rl~~eaGa~aVklEdg~e~~~~I~al~~ 147 (281)
T 1oy0_A 117 AATRFLKDGGAHAVKLEGGERVAEQIACLTA 147 (281)
T ss_dssp HHHHHHHTTCCSEEEEEBSGGGHHHHHHHHH
T ss_pred HHHHHHHHhCCeEEEECCcHHHHHHHHHHHH
Confidence 23444599999974333223344444444
No 295
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=94.22 E-value=0.18 Score=47.22 Aligned_cols=138 Identities=14% Similarity=0.161 Sum_probs=73.5
Q ss_pred hcCcceEeecccc--------chHHHHHHHHcCCCeeeec--CCCChhHHHHH-HHhcCCCCcEEeecC---CHHHHHHH
Q 037779 90 SVTIPVMAKARIG--------HFVEAQILEAIGVDYVDES--EVLTPADEENH-INKHNFRVPFVCGCR---NLGESLRR 155 (310)
Q Consensus 90 ~~~lPv~~kd~i~--------~~~~~~~~~~aGad~v~~~--~~~~~~~~~~~-~~~~~~~l~v~~~v~---t~~ea~~a 155 (310)
....|+++.-.-+ ....++.+.++|+-....+ ..+..++...+ +.+..++.++++.+. +.+++.++
T Consensus 84 ~l~~Pi~iapMtgg~~~~~~in~~lA~~a~~~G~~~~vGs~~~~le~~~~~~~~v~r~~P~~~~ianig~~~~~e~~~~~ 163 (365)
T 3sr7_A 84 DFDFPFYINAMTGGSQKGKEVNEKLAQVADTCGLLFVTGSYSTALKNPDDTSYQVKKSRPHLLLATNIGLDKPYQAGLQA 163 (365)
T ss_dssp EESSSEEEECC----CCCHHHHHHHHHHHHHHTCCEEC-----------------------CCEEEEEETTSCHHHHHHH
T ss_pred EccCceEeccccCCCcchhHHHHHHHHHHHHcCCCeecccccccccCccccceEehhhCCCCcEEEEeCCCCCHHHHHHH
Confidence 3467988865432 1235677888999887732 11111111111 222224566655543 56677776
Q ss_pred H-HhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCC--
Q 037779 156 I-REGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGV-- 232 (310)
Q Consensus 156 ~-~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI-- 232 (310)
. ..|+|.+.++-... .+. ..+.-+ +++..-.+.++.+++..++||++ .|+
T Consensus 164 ve~~~adal~ihln~~----qe~------------~~p~Gd--------~~~~~~~~~I~~l~~~~~~PViv---K~vg~ 216 (365)
T 3sr7_A 164 VRDLQPLFLQVHINLM----QEL------------LMPEGE--------REFRSWKKHLSDYAKKLQLPFIL---KEVGF 216 (365)
T ss_dssp HHHHCCSCEEEEECHH----HHH------------TSSSSC--------CCCHHHHHHHHHHHHHCCSCEEE---EECSS
T ss_pred HHhcCCCEEEEecccc----ccc------------cCCCCC--------CcHHHHHHHHHHHHHhhCCCEEE---EECCC
Confidence 6 67999988862200 000 000000 01111125677787777899963 345
Q ss_pred -CCHHHHHHHHHcCCCEEEEccc
Q 037779 233 -ATPADAAMMMQLGCDGVFVGSG 254 (310)
Q Consensus 233 -~t~~di~~~~~~GadgV~VGsa 254 (310)
.+++++..+.++|+|+|.|+..
T Consensus 217 g~s~e~A~~l~~aGad~I~V~g~ 239 (365)
T 3sr7_A 217 GMDVKTIQTAIDLGVKTVDISGR 239 (365)
T ss_dssp CCCHHHHHHHHHHTCCEEECCCB
T ss_pred CCCHHHHHHHHHcCCCEEEEeCC
Confidence 5899999999999999999543
No 296
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=94.21 E-value=2.3 Score=37.99 Aligned_cols=93 Identities=13% Similarity=0.121 Sum_probs=48.4
Q ss_pred cCCCHHHHHHHHHcCCcEEEecccccchhhhcC-CCCCCCChH----HHHHHHhhcCcceEeecc-ccc----hHH----
Q 037779 41 DVVTPEQARIAEEAGACAVMALERVPADIRAQG-GVARMSDPQ----LIKQIKSSVTIPVMAKAR-IGH----FVE---- 106 (310)
Q Consensus 41 ~~~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~-G~~~~~~~~----~i~~i~~~~~lPv~~kd~-i~~----~~~---- 106 (310)
.+-|+-.|+.++++|++.|..--.. -.-..+ -+...-.++ ..+.|++.++.|+++-|. ++. .++
T Consensus 23 tayDa~sA~l~e~aG~d~ilvGdSl--~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~~n 100 (275)
T 1o66_A 23 TAYESSFAALMDDAGVEMLLVGDSL--GMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQSKEQAFAA 100 (275)
T ss_dssp ECCSHHHHHHHHHTTCCEEEECTTH--HHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEECCTTSSSSCHHHHHHH
T ss_pred eCcCHHHHHHHHHcCCCEEEECHHH--HHHHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEECCCCCccCCHHHHHHH
Confidence 4567899999999999998432000 000001 111112233 345677777776655542 222 222
Q ss_pred HHHHHHcCCCeeeecCCCChhHHHHHHHh
Q 037779 107 AQILEAIGVDYVDESEVLTPADEENHINK 135 (310)
Q Consensus 107 ~~~~~~aGad~v~~~~~~~~~~~~~~~~~ 135 (310)
+..+..+||+.|.+-+.....+.++.+..
T Consensus 101 a~rl~kaGa~aVklEdg~e~~~~I~al~~ 129 (275)
T 1o66_A 101 AAELMAAGAHMVKLEGGVWMAETTEFLQM 129 (275)
T ss_dssp HHHHHHTTCSEEEEECSGGGHHHHHHHHH
T ss_pred HHHHHHcCCcEEEECCcHHHHHHHHHHHH
Confidence 23566699999974333223344444444
No 297
>2vxn_A Triosephosphate isomerase; fatty acid biosynthesis, transition state analogue, glycolysis, pentose shunt, gluconeogenesis, TIM, glycosome; HET: PGH PGA; 0.82A {Leishmania mexicana} PDB: 1if2_A* 1qds_A 1n55_A* 2y61_A 2y62_A 2y63_A 1amk_A 1tpf_A 1iig_A 1ag1_O* 1iih_A 1tpd_A 1trd_A* 2v5l_A 4tim_A* 5tim_A 6tim_A*
Probab=94.17 E-value=0.5 Score=41.83 Aligned_cols=42 Identities=24% Similarity=0.365 Sum_probs=34.2
Q ss_pred CCCEEEEccCCCCCHHHHHHHHH-cCCCEEEEccccccCCCHHHHHH
Q 037779 221 RLPVVHFAAGGVATPADAAMMMQ-LGCDGVFVGSGVFKSGDPVRRAR 266 (310)
Q Consensus 221 ~iPVv~ia~GGI~t~~di~~~~~-~GadgV~VGsai~~~~dp~~~~~ 266 (310)
.++| +..|++ +++++.+++. .++||++||++-++ +++...++
T Consensus 206 ~vrI--lYGGSV-~~~N~~~l~~~~diDG~LVGgAsL~-~~F~~Ii~ 248 (251)
T 2vxn_A 206 KLRI--LYGGSV-NAANAATLYAKPDINGFLVGGASLK-PEFRDIID 248 (251)
T ss_dssp HCEE--EEESSC-CTTTHHHHHTSTTCCEEEESGGGGS-TTHHHHHH
T ss_pred cccE--EEcCCc-CHhHHHHHhcCCCCCeeeecHHHHH-HHHHHHHH
Confidence 3677 679999 5899988885 69999999999999 88765543
No 298
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=94.14 E-value=0.14 Score=47.37 Aligned_cols=90 Identities=17% Similarity=-0.006 Sum_probs=59.5
Q ss_pred ccceeeecCCcccc----CCC-HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeecccc
Q 037779 28 VGLAQMLRGGVIMD----VVT-PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIG 102 (310)
Q Consensus 28 ~~~~~~l~~g~i~~----~~~-~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~ 102 (310)
.++..+|+..+..+ ..+ .++++.++++|++.|+..+....+.....+. ..+.+.++++++.+++||+....+.
T Consensus 210 ~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~--~~~~~~~~~ik~~~~iPVi~~GgI~ 287 (340)
T 3gr7_A 210 GPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYP--GYQVPFAELIRREADIPTGAVGLIT 287 (340)
T ss_dssp SCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCT--TTTHHHHHHHHHHTTCCEEEESSCC
T ss_pred CceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCc--cccHHHHHHHHHHcCCcEEeeCCCC
Confidence 35666776543221 122 4789999999999985542100000000000 1146788999999999999998887
Q ss_pred chHHHHHHHHcC-CCeee
Q 037779 103 HFVEAQILEAIG-VDYVD 119 (310)
Q Consensus 103 ~~~~~~~~~~aG-ad~v~ 119 (310)
+.+.++.+.+.| ||.|.
T Consensus 288 s~e~a~~~L~~G~aD~V~ 305 (340)
T 3gr7_A 288 SGWQAEEILQNGRADLVF 305 (340)
T ss_dssp CHHHHHHHHHTTSCSEEE
T ss_pred CHHHHHHHHHCCCeeEEE
Confidence 778888888888 99987
No 299
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=94.10 E-value=2.7 Score=37.92 Aligned_cols=82 Identities=13% Similarity=0.112 Sum_probs=45.9
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCCh---HHHHHHHhhc--CcceEeeccccc----hHHHHHHHHcCCC
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDP---QLIKQIKSSV--TIPVMAKARIGH----FVEAQILEAIGVD 116 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~---~~i~~i~~~~--~lPv~~kd~i~~----~~~~~~~~~aGad 116 (310)
+.++.+.+.|+++|..+. .| +-+..+... +.++.+.+.+ ++||++...-.. .+.++.+.++|||
T Consensus 36 ~lv~~li~~Gv~Gl~v~G--tT-----GE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gad 108 (303)
T 2wkj_A 36 RLVQFNIQQGIDGLYVGG--ST-----GEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFD 108 (303)
T ss_dssp HHHHHHHHTTCSEEEESS--TT-----TTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHcCCCEEEECe--ec-----cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCC
Confidence 678888999999985441 00 001112222 2344444443 589988754422 2455677789999
Q ss_pred eee-ecCC---CChhHHHHHHH
Q 037779 117 YVD-ESEV---LTPADEENHIN 134 (310)
Q Consensus 117 ~v~-~~~~---~~~~~~~~~~~ 134 (310)
+++ .+.. .+.+.+.+.++
T Consensus 109 avlv~~P~y~~~s~~~l~~~f~ 130 (303)
T 2wkj_A 109 AVSAVTPFYYPFSFEEHCDHYR 130 (303)
T ss_dssp EEEEECCCSSCCCHHHHHHHHH
T ss_pred EEEecCCCCCCCCHHHHHHHHH
Confidence 987 3322 24445555443
No 300
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=94.08 E-value=0.41 Score=44.65 Aligned_cols=117 Identities=15% Similarity=0.128 Sum_probs=71.6
Q ss_pred HHHHHHHHcCCcEEEeccc----------ccc---hhhhcCCCCCCC----ChHHHHHHHhhcC-cceEeecccc-----
Q 037779 46 EQARIAEEAGACAVMALER----------VPA---DIRAQGGVARMS----DPQLIKQIKSSVT-IPVMAKARIG----- 102 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~----------~~~---d~r~~~G~~~~~----~~~~i~~i~~~~~-lPv~~kd~i~----- 102 (310)
+.|+.+.++|+++| .+|. .|. -...++|+. .+ ..+.++++|+.++ -||.+|....
T Consensus 165 ~aA~~a~~aGfDgV-eih~a~GyLl~qFlsp~~N~R~D~yGGsl-enr~r~~~eiv~avr~~vg~~~v~vrls~~~~~~~ 242 (364)
T 1vyr_A 165 QAVANAREAGFDLV-ELHSAHGYLLHQFLSPSSNQRTDQYGGSV-ENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQN 242 (364)
T ss_dssp HHHHHHHHTTCSEE-EEEECTTSHHHHHHCTTTCCCCSTTSSSH-HHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBTT
T ss_pred HHHHHHHHcCCCEE-EEcCccchHHHhccCCcccccCCcCCcch-hcChhhHHHHHHHHHHhcCCCcEEEEEcccccccc
Confidence 55778899999998 5541 121 011244541 11 1334677888773 2888853332
Q ss_pred ------ch----HHHHHHHHcCCCeeeecCC------CChhHHHHHHHhcCCCCcEEe--ecCCHHHHHHHHHhC-CCEE
Q 037779 103 ------HF----VEAQILEAIGVDYVDESEV------LTPADEENHINKHNFRVPFVC--GCRNLGESLRRIREG-AAMI 163 (310)
Q Consensus 103 ------~~----~~~~~~~~aGad~v~~~~~------~~~~~~~~~~~~~~~~l~v~~--~v~t~~ea~~a~~~G-ad~I 163 (310)
+. ..++.+.++|+|++..+.. ..+.++.+.+++. ..+++++ ++ |.++++.+++.| +|+|
T Consensus 243 ~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~-~~iPvi~~Ggi-t~~~a~~~l~~g~aD~V 320 (364)
T 1vyr_A 243 VDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRER-FHGVIIGAGAY-TAEKAEDLIGKGLIDAV 320 (364)
T ss_dssp BCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHH-CCSEEEEESSC-CHHHHHHHHHTTSCSEE
T ss_pred ccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCCCcccHHHHHHHHHH-CCCCEEEECCc-CHHHHHHHHHCCCccEE
Confidence 11 2356778899999984421 1133455556553 3456555 36 899999999887 8999
Q ss_pred EEe
Q 037779 164 RTK 166 (310)
Q Consensus 164 ~v~ 166 (310)
.+.
T Consensus 321 ~~g 323 (364)
T 1vyr_A 321 AFG 323 (364)
T ss_dssp EES
T ss_pred EEC
Confidence 985
No 301
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=94.00 E-value=0.88 Score=42.79 Aligned_cols=175 Identities=13% Similarity=0.121 Sum_probs=96.1
Q ss_pred HHHHHHHHcCCcEEEecc-ccc-chhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeeeec-C
Q 037779 46 EQARIAEEAGACAVMALE-RVP-ADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVDES-E 122 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~-~~~-~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~~~-~ 122 (310)
++++.+.++|++.+ ... ..| |.+..|.|-. ......++++++..++|++.-.+- ...++.+.+. +|.+-+. .
T Consensus 160 ~~a~~~k~aGa~~v-k~q~fkprts~~~f~gl~-~egl~~L~~~~~~~Gl~~~te~~d--~~~~~~l~~~-vd~lkIgs~ 234 (385)
T 3nvt_A 160 AVAESIKAKGLKLI-RGGAFKPRTSPYDFQGLG-LEGLKILKRVSDEYGLGVISEIVT--PADIEVALDY-VDVIQIGAR 234 (385)
T ss_dssp HHHHHHHHTTCCEE-ECBSSCCCSSTTSCCCCT-HHHHHHHHHHHHHHTCEEEEECCS--GGGHHHHTTT-CSEEEECGG
T ss_pred HHHHHHHHcCCCeE-EcccccCCCChHhhcCCC-HHHHHHHHHHHHHcCCEEEEecCC--HHHHHHHHhh-CCEEEECcc
Confidence 67899999999987 222 111 1111232221 122345666777789999775432 2455556666 8887644 3
Q ss_pred CCChhHHHHHHHhcCCCCcEEeec---CCHHHHHHHHH----hCC-CEEEEe-cCCCCCchHHHHHHHHHhhcceecccc
Q 037779 123 VLTPADEENHINKHNFRVPFVCGC---RNLGESLRRIR----EGA-AMIRTK-GEAGTGNIVEAVRHVRSVMGDIRVLRN 193 (310)
Q Consensus 123 ~~~~~~~~~~~~~~~~~l~v~~~v---~t~~ea~~a~~----~Ga-d~I~v~-g~~~~~~~~~~~~~~~~~~~~~~~l~~ 193 (310)
......+.+.+.+ .+.+++++. .|++|...+++ .|. +++-.+ |.. .+++
T Consensus 235 ~~~n~~LL~~~a~--~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s--------------------~yp~ 292 (385)
T 3nvt_A 235 NMQNFELLKAAGR--VDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCERGIR--------------------TYEK 292 (385)
T ss_dssp GTTCHHHHHHHHT--SSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBC--------------------CSCC
T ss_pred cccCHHHHHHHHc--cCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCC--------------------CCCC
Confidence 3345566666654 467777763 67888766653 465 455444 221 1111
Q ss_pred cCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHH----HHHHHHHcCCCEEEEccccc
Q 037779 194 MDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPA----DAAMMMQLGCDGVFVGSGVF 256 (310)
Q Consensus 194 ~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~----di~~~~~~GadgV~VGsai~ 256 (310)
... ...+...+..+++..++||+.-.+=|++..+ -...+..+||+|+++=.-+.
T Consensus 293 ~~~---------~~ldl~~i~~lk~~~~lpV~~D~th~~G~r~~v~~~a~AAvA~GA~gl~iE~H~~ 350 (385)
T 3nvt_A 293 ATR---------NTLDISAVPILKKETHLPVMVDVTHSTGRKDLLLPCAKAALAIEADGVMAEVHPD 350 (385)
T ss_dssp SSS---------SBCCTTHHHHHHHHBSSCEEEEHHHHHCCGGGHHHHHHHHHHTTCSEEEEEBCSC
T ss_pred CCc---------cccCHHHHHHHHHhcCCCEEEcCCCCCCccchHHHHHHHHHHhCCCEEEEEecCC
Confidence 111 0123444566666567898432222222222 24456789999999987444
No 302
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=93.98 E-value=0.42 Score=43.13 Aligned_cols=27 Identities=15% Similarity=0.106 Sum_probs=22.3
Q ss_pred CcEEeecCCHHHHHHHHHhCCCEEEEe
Q 037779 140 VPFVCGCRNLGESLRRIREGAAMIRTK 166 (310)
Q Consensus 140 l~v~~~v~t~~ea~~a~~~Gad~I~v~ 166 (310)
+.+=+.+.|.+++..|.+.|||-|=..
T Consensus 40 ~~lEvc~~s~~~a~~A~~gGAdRIELc 66 (287)
T 3iwp_A 40 FLMEVCVDSVESAVNAERGGADRIELC 66 (287)
T ss_dssp SEEEEEESSHHHHHHHHHHTCSEEEEC
T ss_pred ceEEEEeCCHHHHHHHHHhCCCEEEEC
Confidence 555667789999999999999988664
No 303
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=93.94 E-value=0.66 Score=43.23 Aligned_cols=118 Identities=19% Similarity=0.220 Sum_probs=71.7
Q ss_pred HHHHHHHHcCCcEEEeccc-c---------cc---hhhhcCCCC--CC-CChHHHHHHHhhcCc-ceEeecccc------
Q 037779 46 EQARIAEEAGACAVMALER-V---------PA---DIRAQGGVA--RM-SDPQLIKQIKSSVTI-PVMAKARIG------ 102 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~-~---------~~---d~r~~~G~~--~~-~~~~~i~~i~~~~~l-Pv~~kd~i~------ 102 (310)
+.|+.+.++|+++| .+|. + |. -...++|+. +. -..+.++++|+.++- ||.+|....
T Consensus 165 ~aA~~a~~aGfDgV-eih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~~~~ 243 (365)
T 2gou_A 165 QAALNAMEAGFDGI-ELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLNGT 243 (365)
T ss_dssp HHHHHHHHTTCSEE-EEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCTTSC
T ss_pred HHHHHHHHcCCCEE-EEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccccCCC
Confidence 45777899999998 5541 0 11 011244541 00 012446778877632 888864331
Q ss_pred ----ch----HHHHHHHHcCCCeeeecCC------CChhHHHHHHHhcCCCCcEEe--ecCCHHHHHHHHHhC-CCEEEE
Q 037779 103 ----HF----VEAQILEAIGVDYVDESEV------LTPADEENHINKHNFRVPFVC--GCRNLGESLRRIREG-AAMIRT 165 (310)
Q Consensus 103 ----~~----~~~~~~~~aGad~v~~~~~------~~~~~~~~~~~~~~~~l~v~~--~v~t~~ea~~a~~~G-ad~I~v 165 (310)
.. ..++.+.++|+|+++.+.. ..+.++.+.+++. .++++++ ++ |.++++.+++.| ||.|.+
T Consensus 244 ~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~i~~~-~~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~i 321 (365)
T 2gou_A 244 VDADPILTYTAAAALLNKHRIVYLHIAEVDWDDAPDTPVSFKRALREA-YQGVLIYAGRY-NAEKAEQAINDGLADMIGF 321 (365)
T ss_dssp CCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHH-CCSEEEEESSC-CHHHHHHHHHTTSCSEEEC
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCCCCccHHHHHHHHHH-CCCcEEEeCCC-CHHHHHHHHHCCCcceehh
Confidence 11 2356778899999984422 1123555666653 3455555 36 899999999988 999998
Q ss_pred e
Q 037779 166 K 166 (310)
Q Consensus 166 ~ 166 (310)
.
T Consensus 322 g 322 (365)
T 2gou_A 322 G 322 (365)
T ss_dssp C
T ss_pred c
Confidence 5
No 304
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=93.86 E-value=3.8 Score=37.48 Aligned_cols=83 Identities=18% Similarity=0.103 Sum_probs=46.6
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCCh---HHHHHHHhhc--CcceEeeccccc----hHHHHHHHHcCCC
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDP---QLIKQIKSSV--TIPVMAKARIGH----FVEAQILEAIGVD 116 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~---~~i~~i~~~~--~lPv~~kd~i~~----~~~~~~~~~aGad 116 (310)
+.++.+.+.|+++|..+. ..+-+..+... +.++.+.+.+ .+||++...-.. .+.++.+.++|||
T Consensus 59 ~lv~~li~~Gv~Gl~v~G-------tTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gad 131 (332)
T 2r8w_A 59 ALIARLDAAEVDSVGILG-------STGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGAD 131 (332)
T ss_dssp HHHHHHHHHTCSEEEESS-------TTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHcCCCEEEECc-------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCC
Confidence 678888999999985441 00001112222 2344444443 589998754432 2455677789999
Q ss_pred eee-ecCC---CChhHHHHHHHh
Q 037779 117 YVD-ESEV---LTPADEENHINK 135 (310)
Q Consensus 117 ~v~-~~~~---~~~~~~~~~~~~ 135 (310)
+++ .+.. .+...+.+.++.
T Consensus 132 avlv~~P~Y~~~s~~~l~~~f~~ 154 (332)
T 2r8w_A 132 ALLLAPVSYTPLTQEEAYHHFAA 154 (332)
T ss_dssp EEEECCCCSSCCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCCHHHHHHHHHH
Confidence 998 3322 244455555543
No 305
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=93.83 E-value=1.1 Score=42.20 Aligned_cols=92 Identities=11% Similarity=0.104 Sum_probs=61.5
Q ss_pred CCCCCCChHHHHHHHhhcCcceEeeccccchHHH----HHHHHcCC-Ceee---ecCCCChh-----HHHHHHHhcCCCC
Q 037779 74 GVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEA----QILEAIGV-DYVD---ESEVLTPA-----DEENHINKHNFRV 140 (310)
Q Consensus 74 G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~----~~~~~aGa-d~v~---~~~~~~~~-----~~~~~~~~~~~~l 140 (310)
||..+.|+.+|+.+.+ ++.||+++.+..+.+++ +.+.+.|. +.++ .+...++. ..+..+++..+++
T Consensus 141 gS~~~~N~pLL~~va~-~gKPViLStGmaTl~Ei~~Ave~i~~~Gn~~iiLlhc~s~YPtp~~~~nL~aI~~Lk~~f~~l 219 (385)
T 1vli_A 141 ASYEINHLPLLKYVAR-LNRPMIFSTAGAEISDVHEAWRTIRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPMLAAAFPEA 219 (385)
T ss_dssp CGGGTTCHHHHHHHHT-TCSCEEEECTTCCHHHHHHHHHHHHTTTCCCEEEEEECSSSSCCGGGCCTTHHHHHHHHSTTS
T ss_pred CcccccCHHHHHHHHh-cCCeEEEECCCCCHHHHHHHHHHHHHCCCCcEEEEeccCCCCCChhhcCHHHHHHHHHHcCCC
Confidence 5666889999999885 69999999877654443 34445787 5555 22222222 2345555543378
Q ss_pred cEEeecCC---HHHHHHHHHhCCCEEEEe
Q 037779 141 PFVCGCRN---LGESLRRIREGAAMIRTK 166 (310)
Q Consensus 141 ~v~~~v~t---~~ea~~a~~~Gad~I~v~ 166 (310)
+++.+-|+ ..-+..|..+||++|=.+
T Consensus 220 pVG~SdHt~G~~~~~~AAvAlGA~iIEkH 248 (385)
T 1vli_A 220 VIGFSDHSEHPTEAPCAAVRLGAKLIEKH 248 (385)
T ss_dssp EEEEEECCSSSSHHHHHHHHTTCSEEEEE
T ss_pred CEEeCCCCCCchHHHHHHHHcCCCEEEeC
Confidence 88888777 556677889999988665
No 306
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=93.68 E-value=4 Score=37.07 Aligned_cols=83 Identities=20% Similarity=0.230 Sum_probs=46.9
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCCh---HHHHHHHhhc--CcceEeeccccc----hHHHHHHHHcCCC
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDP---QLIKQIKSSV--TIPVMAKARIGH----FVEAQILEAIGVD 116 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~---~~i~~i~~~~--~lPv~~kd~i~~----~~~~~~~~~aGad 116 (310)
+.++.+.+.|++++..+- .|.+ ...+... +.++.+.+.+ ++||++...-.. .+.++.+.++|||
T Consensus 49 ~lv~~li~~Gv~Gi~v~G--tTGE-----~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gad 121 (315)
T 3na8_A 49 RSIERLIDGGVHAIAPLG--STGE-----GAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAE 121 (315)
T ss_dssp HHHHHHHHTTCSEEECSS--GGGT-----GGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEECc--cccC-----hhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCC
Confidence 678889999999984431 0100 0112112 2344444443 589998754332 2455677889999
Q ss_pred eee-ecCC---CChhHHHHHHHh
Q 037779 117 YVD-ESEV---LTPADEENHINK 135 (310)
Q Consensus 117 ~v~-~~~~---~~~~~~~~~~~~ 135 (310)
+++ .+.. .+.+++.+.++.
T Consensus 122 avlv~~P~y~~~s~~~l~~~f~~ 144 (315)
T 3na8_A 122 AVMVLPISYWKLNEAEVFQHYRA 144 (315)
T ss_dssp EEEECCCCSSCCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCCHHHHHHHHHH
Confidence 998 3322 244555555543
No 307
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=93.63 E-value=0.31 Score=47.46 Aligned_cols=112 Identities=20% Similarity=0.107 Sum_probs=72.6
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhc-C-cceEeeccccchHHHHHHHHcCCCeeeecC
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSV-T-IPVMAKARIGHFVEAQILEAIGVDYVDESE 122 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~-~-lPv~~kd~i~~~~~~~~~~~aGad~v~~~~ 122 (310)
.+.++.+.++|++.+..- .. .|.. ....+.++.+++.. + +|++++... +.+.++.+.++|+|.+....
T Consensus 244 ~e~~~~l~e~gv~~l~Vd------~~--~g~~-~~~~~~i~~lk~~~~~~~~Vi~G~V~-t~~~a~~l~~aGad~I~Vg~ 313 (503)
T 1me8_A 244 RERVPALVEAGADVLCID------SS--DGFS-EWQKITIGWIREKYGDKVKVGAGNIV-DGEGFRYLADAGADFIKIGI 313 (503)
T ss_dssp HHHHHHHHHHTCSEEEEC------CS--CCCS-HHHHHHHHHHHHHHGGGSCEEEEEEC-SHHHHHHHHHHTCSEEEECS
T ss_pred HHHHHHHHhhhccceEEe------cc--cCcc-cchhhHHHHHHHhCCCCceEeecccc-CHHHHHHHHHhCCCeEEecc
Confidence 467889999999987331 11 1110 00156677788776 5 888876544 34678889999999985211
Q ss_pred -C-------------CChh----HHHHHHHh----cCCCCcEEe--ecCCHHHHHHHHHhCCCEEEEe
Q 037779 123 -V-------------LTPA----DEENHINK----HNFRVPFVC--GCRNLGESLRRIREGAAMIRTK 166 (310)
Q Consensus 123 -~-------------~~~~----~~~~~~~~----~~~~l~v~~--~v~t~~ea~~a~~~Gad~I~v~ 166 (310)
. .+.. ++.+.+.. ++.++++++ ++.+..++.+|+.+||+.|.+.
T Consensus 314 ~~g~~~~~r~~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~~~~di~kAlalGA~~V~iG 381 (503)
T 1me8_A 314 GGGSICITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIVYDYHMTLALAMGADFIMLG 381 (503)
T ss_dssp SCSTTCCSTTTTCCCCCHHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred cCCcCcccccccCCCCchHHHHHHHHHHHHHHhhhcCCCceEEEeCCCCCHHHHHHHHHcCCCEEEEC
Confidence 0 1111 22222221 122588999 7999999999999999999885
No 308
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=93.63 E-value=3.8 Score=36.66 Aligned_cols=84 Identities=20% Similarity=0.215 Sum_probs=47.0
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCCh---HHHHHHHhhc--CcceEeeccccc----hHHHHHHHHcCC
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDP---QLIKQIKSSV--TIPVMAKARIGH----FVEAQILEAIGV 115 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~---~~i~~i~~~~--~lPv~~kd~i~~----~~~~~~~~~aGa 115 (310)
.+.++.+.+.|++++..+. .|.+ +..+... +.++.+.+.+ ++||++...-.. .+.++.+.++||
T Consensus 25 ~~lv~~li~~Gv~gl~~~G--ttGE-----~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Ga 97 (291)
T 3a5f_A 25 SELIEWHIKSKTDAIIVCG--TTGE-----ATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGV 97 (291)
T ss_dssp HHHHHHHHHTTCCEEEESS--GGGT-----GGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCEEEECc--cccC-----hhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcCC
Confidence 3678889999999985441 0100 1112222 2344444443 589988754432 245567788999
Q ss_pred Ceee-ecCC---CChhHHHHHHHh
Q 037779 116 DYVD-ESEV---LTPADEENHINK 135 (310)
Q Consensus 116 d~v~-~~~~---~~~~~~~~~~~~ 135 (310)
|+++ .+.. .+.+.+.+.++.
T Consensus 98 davlv~~P~y~~~s~~~l~~~f~~ 121 (291)
T 3a5f_A 98 DGLLVITPYYNKTTQKGLVKHFKA 121 (291)
T ss_dssp SEEEEECCCSSCCCHHHHHHHC-C
T ss_pred CEEEEcCCCCCCCCHHHHHHHHHH
Confidence 9987 3322 244555555543
No 309
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=93.61 E-value=2.4 Score=37.87 Aligned_cols=175 Identities=17% Similarity=0.189 Sum_probs=98.0
Q ss_pred HHHHHHHHcCCcEEE-ecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeeeec-CC
Q 037779 46 EQARIAEEAGACAVM-ALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVDES-EV 123 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~-~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~~~-~~ 123 (310)
++++.+.++|++.+- +.....|.+..|.|.. ...+..+++.++..++|++.--+ +...++.+.+. +|.+-+. ..
T Consensus 56 ~~a~~~k~~ga~~~k~~~~kprts~~~f~g~g-~~gl~~l~~~~~~~Gl~~~te~~--d~~~~~~l~~~-vd~~kIgs~~ 131 (276)
T 1vs1_A 56 EAALAVKEAGAHMLRGGAFKPRTSPYSFQGLG-LEGLKLLRRAGDEAGLPVVTEVL--DPRHVETVSRY-ADMLQIGARN 131 (276)
T ss_dssp HHHHHHHHHTCSEEECBSSCCCSSTTSCCCCT-HHHHHHHHHHHHHHTCCEEEECC--CGGGHHHHHHH-CSEEEECGGG
T ss_pred HHHHHHHHhCCCEEEeEEEeCCCChhhhcCCC-HHHHHHHHHHHHHcCCcEEEecC--CHHHHHHHHHh-CCeEEECccc
Confidence 678999999999862 1111111111232221 12244566777778999976533 22456667777 8888744 33
Q ss_pred CChhHHHHHHHhcCCCCcEEee--cC-CHHHHHHHHH----hCC-CEEEEe-cC-CCCCchHHHHHHHHHhhcceecccc
Q 037779 124 LTPADEENHINKHNFRVPFVCG--CR-NLGESLRRIR----EGA-AMIRTK-GE-AGTGNIVEAVRHVRSVMGDIRVLRN 193 (310)
Q Consensus 124 ~~~~~~~~~~~~~~~~l~v~~~--v~-t~~ea~~a~~----~Ga-d~I~v~-g~-~~~~~~~~~~~~~~~~~~~~~~l~~ 193 (310)
.....+.+.+.+ .+.+++++ .. |++|...+++ .|. +++-.+ |. .|.+
T Consensus 132 ~~n~~ll~~~a~--~~kPV~lk~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~--------------------- 188 (276)
T 1vs1_A 132 MQNFPLLREVGR--SGKPVLLKRGFGNTVEELLAAAEYILLEGNWQVVLVERGIRTFEP--------------------- 188 (276)
T ss_dssp TTCHHHHHHHHH--HTCCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCC---------------------
T ss_pred ccCHHHHHHHHc--cCCeEEEcCCCCCCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCC---------------------
Confidence 445556666655 35677665 43 6687776654 465 566555 32 1211
Q ss_pred cCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEcc--CCCCC--HHHHHHHHHcCCCEEEEccccc
Q 037779 194 MDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAA--GGVAT--PADAAMMMQLGCDGVFVGSGVF 256 (310)
Q Consensus 194 ~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~--GGI~t--~~di~~~~~~GadgV~VGsai~ 256 (310)
-+ ....+...+..+++..++||+..++ +|... ..-......+||+|+++=+-+.
T Consensus 189 y~---------~~~vdl~~i~~lk~~~~lpVi~dssH~~g~~~~~~~~~~aAva~Ga~Gl~IE~H~~ 246 (276)
T 1vs1_A 189 ST---------RFTLDVAAVAVLKEATHLPVIVDPSHPAGRRSLVPALAKAGLAAGADGLIVEVHPN 246 (276)
T ss_dssp SS---------SSBCBHHHHHHHHHHBSSCEEECCHHHHCSGGGHHHHHHHHHHTTCSEEEEEBCSS
T ss_pred cC---------cchhCHHHHHHHHHHhCCCEEEeCCCCCCccchHHHHHHHHHHcCCCEEEEEecCC
Confidence 00 0122455566677655789842222 14221 2334455678999999998874
No 310
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=93.49 E-value=3.8 Score=36.19 Aligned_cols=87 Identities=17% Similarity=0.164 Sum_probs=50.9
Q ss_pred ccccC-CCHHHHHHHHHcCCcEE-Eecc-cccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHHHHHHcC
Q 037779 38 VIMDV-VTPEQARIAEEAGACAV-MALE-RVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIG 114 (310)
Q Consensus 38 ~i~~~-~~~~~a~~~~~~Ga~~I-~~l~-~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aG 114 (310)
..... .+|+.++.+...|+|++ .+++ .++...+ -...++.+. ..+.+++++.--.+...++.+.++|
T Consensus 19 ~~~~~~~~p~~~e~a~~~g~D~vilDlEhav~~~~k---------~~~~l~a~~-~~~~~~~VRVn~~~~~di~~~ld~G 88 (261)
T 3qz6_A 19 TMLNLVYNPDIVRIYAEAGLDYFIVDCEHAAYTFRE---------INHLVSVAK-NAGVSVLVRIPQVDRAHVQRLLDIG 88 (261)
T ss_dssp EEESSCCCTTHHHHHHHTTCSEEEEESSSSCCCHHH---------HHHHHHHHH-HHTCEEEEECSSCCHHHHHHHHHHT
T ss_pred EEEecCCCHHHHHHHhcCCcCEEEEeccCCCCCHHH---------HHHHHHHHh-hcCCeEEEEeCCCCHHHHHHHHhcC
Confidence 33444 67899999999999997 3453 1111110 012232222 2355555543222334677778899
Q ss_pred CCeeeecCCCChhHHHHHHH
Q 037779 115 VDYVDESEVLTPADEENHIN 134 (310)
Q Consensus 115 ad~v~~~~~~~~~~~~~~~~ 134 (310)
++.|..+...+++++.....
T Consensus 89 ~~gI~lP~v~saed~~~~~~ 108 (261)
T 3qz6_A 89 AEGFMIPGVQSAETMRETVR 108 (261)
T ss_dssp CCEEEETTCCSHHHHHHHHH
T ss_pred CCEEEECCcCCHHHHHHHHH
Confidence 99999887767776655443
No 311
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=93.48 E-value=1.2 Score=41.23 Aligned_cols=92 Identities=17% Similarity=0.221 Sum_probs=61.6
Q ss_pred CCCCCCChHHHHHHHhhcCcceEeeccccchHHH----HHHHHcCCCeee---ecCCCChh-----HHHHHHHhcCCCCc
Q 037779 74 GVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEA----QILEAIGVDYVD---ESEVLTPA-----DEENHINKHNFRVP 141 (310)
Q Consensus 74 G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~----~~~~~aGad~v~---~~~~~~~~-----~~~~~~~~~~~~l~ 141 (310)
||..+.|+.+|+++.+ ++.||+++.+..+.+++ +.+.+.|.+.++ .+...++. ..+..+++..++++
T Consensus 131 ~S~~~~n~~LL~~va~-~gkPviLstGmat~~Ei~~Ave~i~~~G~~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f~~lp 209 (349)
T 2wqp_A 131 GSGECNNYPLIKLVAS-FGKPIILSTGMNSIESIKKSVEIIREAGVPYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAI 209 (349)
T ss_dssp CGGGTTCHHHHHHHHT-TCSCEEEECTTCCHHHHHHHHHHHHHHTCCEEEEECCCCSSCCGGGCCTHHHHHHHHHCTTSE
T ss_pred CcccccCHHHHHHHHh-cCCeEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeccCCCCCChhhcCHHHHHHHHHHCCCCC
Confidence 5666889999999885 69999999877654333 444557888776 22222222 33455555433788
Q ss_pred EEeecCCH--HHHHHHHHhCCCEEEEe
Q 037779 142 FVCGCRNL--GESLRRIREGAAMIRTK 166 (310)
Q Consensus 142 v~~~v~t~--~ea~~a~~~Gad~I~v~ 166 (310)
++.+-|+. .-+..|..+||++|=.|
T Consensus 210 Vg~sdHt~G~~~~~AAvAlGA~iIEkH 236 (349)
T 2wqp_A 210 IGLSDHTLDNYACLGAVALGGSILERH 236 (349)
T ss_dssp EEEECCSSSSHHHHHHHHHTCCEEEEE
T ss_pred EEeCCCCCcHHHHHHHHHhCCCEEEeC
Confidence 88877773 35567779999988766
No 312
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=93.45 E-value=1.7 Score=40.36 Aligned_cols=92 Identities=15% Similarity=0.161 Sum_probs=61.2
Q ss_pred CCCCCCChHHHHHHHhhcCcceEeeccccchHHHH----HHHHcCCCeee--e-cCCCChh-----HHHHHHHhcCCCCc
Q 037779 74 GVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQ----ILEAIGVDYVD--E-SEVLTPA-----DEENHINKHNFRVP 141 (310)
Q Consensus 74 G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~----~~~~aGad~v~--~-~~~~~~~-----~~~~~~~~~~~~l~ 141 (310)
||..+.|+.+|+.+.+ ++.||+++.+..+.++++ .+.+.|.+.++ . +...++. ..+..+++..++++
T Consensus 118 ~S~~~~N~pLL~~va~-~gKPviLstGmstl~Ei~~Ave~i~~~g~~viLlhC~s~YPt~~~~~nL~aI~~Lk~~fp~lp 196 (350)
T 3g8r_A 118 ASCSFTDWPLLERIAR-SDKPVVASTAGARREDIDKVVSFMLHRGKDLTIMHCVAEYPTPDDHLHLARIKTLRQQYAGVR 196 (350)
T ss_dssp CSSSTTCHHHHHHHHT-SCSCEEEECTTCCHHHHHHHHHHHHTTTCCEEEEECCCCSSCCGGGCCTTHHHHHHHHCTTSE
T ss_pred CcccccCHHHHHHHHh-hCCcEEEECCCCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCcccCCHHHHHHHHHHCCCCC
Confidence 5667889999999985 699999998876544443 33446877666 2 2222222 24455555544788
Q ss_pred EEeecCCH----HHHHHHHHhCCCEEEEe
Q 037779 142 FVCGCRNL----GESLRRIREGAAMIRTK 166 (310)
Q Consensus 142 v~~~v~t~----~ea~~a~~~Gad~I~v~ 166 (310)
++.+-|+. .-+..|..+||++|=.+
T Consensus 197 VG~SdHt~g~~~~~~~AAvAlGA~vIEkH 225 (350)
T 3g8r_A 197 IGYSTHEDPDLMEPIMLAVAQGATVFEKH 225 (350)
T ss_dssp EEEEECCCSSCCHHHHHHHHTTCCEEEEE
T ss_pred EEcCCCCCCCccHHHHHHHHcCCCEEEEe
Confidence 88887774 23457889999988665
No 313
>1b9b_A TIM, protein (triosephosphate isomerase); thermophilic; 2.85A {Thermotoga maritima} SCOP: c.1.1.1
Probab=93.39 E-value=0.27 Score=43.70 Aligned_cols=42 Identities=21% Similarity=0.402 Sum_probs=33.7
Q ss_pred CCCEEEEccCCCCCHHHHHHHH-HcCCCEEEEccccccCC--CHHHHH
Q 037779 221 RLPVVHFAAGGVATPADAAMMM-QLGCDGVFVGSGVFKSG--DPVRRA 265 (310)
Q Consensus 221 ~iPVv~ia~GGI~t~~di~~~~-~~GadgV~VGsai~~~~--dp~~~~ 265 (310)
.++| +..|++ +++|+.+++ +.++||++||++-.+++ ++...+
T Consensus 206 ~vrI--lYGGSV-~~~N~~~l~~~~diDG~LVGgASLka~~~~F~~ii 250 (255)
T 1b9b_A 206 SIRI--LYGGSI-KPDNFLGLIVQKDIDGGLVGGASLKESFIELARIM 250 (255)
T ss_dssp HSEE--EEESSC-CHHHHTTTSSSTTCCEEEESGGGTSTHHHHHHHHH
T ss_pred cceE--EEcCcC-CHHHHHHHHcCCCCCeeEeehHhhcCccccHHHHH
Confidence 3677 679999 589999999 56999999999999976 554433
No 314
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=93.36 E-value=3.5 Score=37.15 Aligned_cols=82 Identities=20% Similarity=0.261 Sum_probs=45.8
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCCh---HHHHHHHhhc--CcceEeeccccc----hHHHHHHHHcCCC
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDP---QLIKQIKSSV--TIPVMAKARIGH----FVEAQILEAIGVD 116 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~---~~i~~i~~~~--~lPv~~kd~i~~----~~~~~~~~~aGad 116 (310)
+.++.+.+.|++++..+. .| +-+..+... +.++.+.+.+ ++||++...-.. .+.++.+.++|||
T Consensus 29 ~lv~~li~~Gv~gl~v~G--tt-----GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gad 101 (300)
T 3eb2_A 29 RLCDDLIQAGVHGLTPLG--ST-----GEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLGAD 101 (300)
T ss_dssp HHHHHHHHTTCSCBBTTS--GG-----GTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHcCCCEEEECc--cc-----cCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCC
Confidence 678889999999983331 01 001112222 2344444443 589998744322 2456677889999
Q ss_pred eee-ecCC---CChhHHHHHHH
Q 037779 117 YVD-ESEV---LTPADEENHIN 134 (310)
Q Consensus 117 ~v~-~~~~---~~~~~~~~~~~ 134 (310)
+++ .+.. .+.+.+.+.++
T Consensus 102 avlv~~P~y~~~~~~~l~~~f~ 123 (300)
T 3eb2_A 102 GILAILEAYFPLKDAQIESYFR 123 (300)
T ss_dssp EEEEEECCSSCCCHHHHHHHHH
T ss_pred EEEEcCCCCCCCCHHHHHHHHH
Confidence 988 3322 24445555544
No 315
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=93.32 E-value=0.47 Score=43.05 Aligned_cols=85 Identities=13% Similarity=0.175 Sum_probs=48.6
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChH-------HHHHHHhhcCcceEeeccccchHHHHHHHHcCCCee
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQ-------LIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYV 118 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~-------~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v 118 (310)
+.|+.+.+.||+.| +++...|.+ |.......+ .++.+++.+++|+++..+ ..+-++.+.++|++.|
T Consensus 67 ~~a~~~v~~GAdiI-DIGgeStrP----ga~~v~~~eE~~RvvpvI~~l~~~~~vpiSIDT~--~~~V~~aAl~aGa~iI 139 (297)
T 1tx2_A 67 RHAKEMRDEGAHII-DIGGESTRP----GFAKVSVEEEIKRVVPMIQAVSKEVKLPISIDTY--KAEVAKQAIEAGAHII 139 (297)
T ss_dssp HHHHHHHHTTCSEE-EEESCC--------CCCCCHHHHHHHHHHHHHHHHHHSCSCEEEECS--CHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHcCCCEE-EECCCcCCC----CCCCCCHHHHHHHHHHHHHHHHhcCCceEEEeCC--CHHHHHHHHHcCCCEE
Confidence 66899999999998 665222211 111111122 234556666899988655 3356677888899999
Q ss_pred e-ecCCCChhHHHHHHHhcC
Q 037779 119 D-ESEVLTPADEENHINKHN 137 (310)
Q Consensus 119 ~-~~~~~~~~~~~~~~~~~~ 137 (310)
- ++.....++....+.+++
T Consensus 140 Ndvsg~~~d~~m~~~aa~~g 159 (297)
T 1tx2_A 140 NDIWGAKAEPKIAEVAAHYD 159 (297)
T ss_dssp EETTTTSSCTHHHHHHHHHT
T ss_pred EECCCCCCCHHHHHHHHHhC
Confidence 6 332211345555555543
No 316
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=93.26 E-value=0.28 Score=45.45 Aligned_cols=90 Identities=17% Similarity=0.126 Sum_probs=60.1
Q ss_pred ccceeeecCCccccCC--C-HHHHHHHHHcCCcEEEecccccchhhhcCCC----CCCCChHHHHHHHhhc-CcceEeec
Q 037779 28 VGLAQMLRGGVIMDVV--T-PEQARIAEEAGACAVMALERVPADIRAQGGV----ARMSDPQLIKQIKSSV-TIPVMAKA 99 (310)
Q Consensus 28 ~~~~~~l~~g~i~~~~--~-~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~----~~~~~~~~i~~i~~~~-~lPv~~kd 99 (310)
.|+..++|.|.-.... + .++++.+.++|+++|.+-.+... . .+.|. ....+.+.++++++.+ ++||+++.
T Consensus 127 ~PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d~I~V~~r~~~-~-g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianG 204 (350)
T 3b0p_A 127 VPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSAL-L-ALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNG 204 (350)
T ss_dssp SCEEEEEESCBTTCCCHHHHHHHHHHHHHTTCCEEEEECSCBC------------CCCCCHHHHHHHHHHCTTSEEEEES
T ss_pred CceEEEEecCcCccccHHHHHHHHHHHHHcCCCEEEEecCchh-c-ccCcccccCCCcccHHHHHHHHHhCCCCeEEEEC
Confidence 5777888876543321 1 47899999999999843311100 0 01111 0112578899999998 99999999
Q ss_pred cccchHHHHHHHHcCCCeeee
Q 037779 100 RIGHFVEAQILEAIGVDYVDE 120 (310)
Q Consensus 100 ~i~~~~~~~~~~~aGad~v~~ 120 (310)
.+.+.+.++.+.+ |||.|.+
T Consensus 205 gI~s~eda~~~l~-GaD~V~i 224 (350)
T 3b0p_A 205 GIRSLEEALFHLK-RVDGVML 224 (350)
T ss_dssp SCCSHHHHHHHHT-TSSEEEE
T ss_pred CcCCHHHHHHHHh-CCCEEEE
Confidence 9987778877777 9999973
No 317
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=93.20 E-value=0.46 Score=43.55 Aligned_cols=84 Identities=14% Similarity=0.122 Sum_probs=48.0
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChH-------HHHHHHhhc-CcceEeeccccchHHHHHHHHcCCCe
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQ-------LIKQIKSSV-TIPVMAKARIGHFVEAQILEAIGVDY 117 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~-------~i~~i~~~~-~lPv~~kd~i~~~~~~~~~~~aGad~ 117 (310)
+.|+.+.+.||+.| +++...|.+ | ......+ .++.+++.+ ++|+++..+ +.+-++.+.++|++.
T Consensus 69 ~~A~~~v~~GAdII-DIGgeSTrP----G-~~v~~~eEl~Rv~pvI~~l~~~~~~vpISIDT~--~~~VaeaAl~aGa~i 140 (318)
T 2vp8_A 69 DAVHRAVADGADVI-DVGGVKAGP----G-ERVDVDTEITRLVPFIEWLRGAYPDQLISVDTW--RAQVAKAACAAGADL 140 (318)
T ss_dssp HHHHHHHHTTCSEE-EEC---------------CHHHHHHHHHHHHHHHHHHSTTCEEEEECS--CHHHHHHHHHHTCCE
T ss_pred HHHHHHHHCCCCEE-EECCCcCCC----C-CCCCHHHHHHHHHHHHHHHHhhCCCCeEEEeCC--CHHHHHHHHHhCCCE
Confidence 67999999999998 765211111 1 0011122 245556665 889887644 335677888899998
Q ss_pred eeecCCCChhHHHHHHHhcC
Q 037779 118 VDESEVLTPADEENHINKHN 137 (310)
Q Consensus 118 v~~~~~~~~~~~~~~~~~~~ 137 (310)
|-.......++....+.+++
T Consensus 141 INDVsg~~d~~m~~vaa~~g 160 (318)
T 2vp8_A 141 INDTWGGVDPAMPEVAAEFG 160 (318)
T ss_dssp EEETTSSSSTTHHHHHHHHT
T ss_pred EEECCCCCchHHHHHHHHhC
Confidence 86222223445555555543
No 318
>1ney_A TIM, triosephosphate isomerase; yeast, DHAP, dihydroxyacetone phosphate, michaelis complex; HET: FTR 13P; 1.20A {Saccharomyces cerevisiae} SCOP: c.1.1.1 PDB: 1nf0_A* 1i45_A* 1ypi_A 2ypi_A 7tim_A* 3ypi_A*
Probab=93.18 E-value=0.37 Score=42.61 Aligned_cols=41 Identities=22% Similarity=0.357 Sum_probs=32.9
Q ss_pred CCCEEEEccCCCCCHHHHHHHHH-cCCCEEEEccccccCCCHHHHH
Q 037779 221 RLPVVHFAAGGVATPADAAMMMQ-LGCDGVFVGSGVFKSGDPVRRA 265 (310)
Q Consensus 221 ~iPVv~ia~GGI~t~~di~~~~~-~GadgV~VGsai~~~~dp~~~~ 265 (310)
.++| +..|++ +++++.+++. .++||++||++-.+ +++...+
T Consensus 202 ~vrI--lYGGSV-~~~N~~~l~~~~diDG~LVGgAsL~-~~F~~Ii 243 (247)
T 1ney_A 202 ELRI--LYGGSA-NGSNAVTFKDKADVDGFLVGGASLK-PEFVDII 243 (247)
T ss_dssp HCCE--EEESSC-CTTTGGGGTTCTTCCEEEESGGGGS-THHHHHH
T ss_pred cceE--EEcCCc-CHhHHHHHHcCCCCCeeEeehHHHH-HHHHHHH
Confidence 4788 579999 5888888885 69999999999999 7665443
No 319
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=93.16 E-value=1.6 Score=39.07 Aligned_cols=167 Identities=9% Similarity=-0.014 Sum_probs=87.1
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeeeecC---
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVDESE--- 122 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~~~~--- 122 (310)
++++.+.+.|++.|-..-+.. .++... .....+.++.+++..++|+.+-. ...+.++.+.++|++.|.+..
T Consensus 30 ~i~~~L~~~Gv~~IE~g~~~~--~~~~p~--~~~~~e~~~~i~~~~~~~v~~l~--~n~~~i~~a~~~G~~~V~i~~~~S 103 (295)
T 1ydn_A 30 ALINRLSDCGYARIEATSFVS--PKWVPQ--LADSREVMAGIRRADGVRYSVLV--PNMKGYEAAAAAHADEIAVFISAS 103 (295)
T ss_dssp HHHHHHTTTTCSEEEEEECSC--TTTCGG--GTTHHHHHHHSCCCSSSEEEEEC--SSHHHHHHHHHTTCSEEEEEEESC
T ss_pred HHHHHHHHcCcCEEEEccCcC--cccccc--ccCHHHHHHHHHhCCCCEEEEEe--CCHHHHHHHHHCCCCEEEEEEecC
Confidence 679999999999873221111 111100 00124556666655466765433 334678889999999987431
Q ss_pred --------CCChhHH-------HHHHHhcCCCCcEEee---------cCCHHHHHH----HHHhCCCEEEEecCCCCCch
Q 037779 123 --------VLTPADE-------ENHINKHNFRVPFVCG---------CRNLGESLR----RIREGAAMIRTKGEAGTGNI 174 (310)
Q Consensus 123 --------~~~~~~~-------~~~~~~~~~~l~v~~~---------v~t~~ea~~----a~~~Gad~I~v~g~~~~~~~ 174 (310)
..+..+. ++.+++++..+...+. -.+++++.. +.+.|+|.+.+.-..+.
T Consensus 104 ~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~Dt~G~--- 180 (295)
T 1ydn_A 104 EGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEVSLGDTIGR--- 180 (295)
T ss_dssp HHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHTCSEEEEEETTSC---
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEecCCCCC---
Confidence 1222222 2333333322210011 134444332 22466666655311000
Q ss_pred HHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCC-CCEEEEc--cCCCCCHHHHHHHHHcCCCEEEE
Q 037779 175 VEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGR-LPVVHFA--AGGVATPADAAMMMQLGCDGVFV 251 (310)
Q Consensus 175 ~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~-iPVv~ia--~GGI~t~~di~~~~~~GadgV~V 251 (310)
..+. ...++++.+++..+ +|+.+=. ..|.. ..+...++++|++-|-+
T Consensus 181 -------------------~~P~----------~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla-~an~l~Ai~aG~~~vd~ 230 (295)
T 1ydn_A 181 -------------------GTPD----------TVAAMLDAVLAIAPAHSLAGHYHDTGGRA-LDNIRVSLEKGLRVFDA 230 (295)
T ss_dssp -------------------CCHH----------HHHHHHHHHHTTSCGGGEEEEEBCTTSCH-HHHHHHHHHHTCCEEEE
T ss_pred -------------------cCHH----------HHHHHHHHHHHhCCCCeEEEEECCCcchH-HHHHHHHHHhCCCEEEe
Confidence 0110 12556666666544 6775444 57874 78889999999998776
No 320
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=93.13 E-value=1.4 Score=39.09 Aligned_cols=111 Identities=15% Similarity=0.244 Sum_probs=73.5
Q ss_pred CHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEE
Q 037779 148 NLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHF 227 (310)
Q Consensus 148 t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~i 227 (310)
++.++.+.++.||..+.|.... .+ +..+.+.+..+++..++||+.
T Consensus 65 dp~~iA~~~~~GA~aiSVLTd~----------------------~~------------F~Gs~~~L~~vr~~v~lPvLr- 109 (258)
T 4a29_A 65 DPIEYAKFMERYAVGLSITTEE----------------------KY------------FNGSYETLRKIASSVSIPILM- 109 (258)
T ss_dssp CHHHHHHHHTTTCSEEEEECCS----------------------TT------------TCCCHHHHHHHHTTCSSCEEE-
T ss_pred CHHHHHHHHhCCCeEEEEeCCC----------------------CC------------CCCCHHHHHHHHHhcCCCEee-
Confidence 5667667778899999886220 00 123566777888878899864
Q ss_pred ccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHcC-CC-------hhhHHhhhhccCCceecccccc
Q 037779 228 AAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTNY-SD-------PDVLAEVSCGLGEAMVGIDLND 299 (310)
Q Consensus 228 a~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~ 299 (310)
=..=| ++-++.++..+|||+|++--++.. ...+++|.+..+.. .+ +.-+ +.+-..|..+.||.=.|
T Consensus 110 KDFii-d~yQI~eAr~~GADaILLI~a~L~----~~~l~~l~~~A~~lGl~~LvEVh~~~El-~rAl~~~a~iIGINNRn 183 (258)
T 4a29_A 110 SDFIV-KESQIDDAYNLGADTVLLIVKILT----ERELESLLEYARSYGMEPLILINDENDL-DIALRIGARFIGIMSRD 183 (258)
T ss_dssp ESCCC-SHHHHHHHHHHTCSEEEEEGGGSC----HHHHHHHHHHHHHTTCCCEEEESSHHHH-HHHHHTTCSEEEECSBC
T ss_pred ccccc-cHHHHHHHHHcCCCeeehHHhhcC----HHHHHHHHHHHHHHhHHHHHhcchHHHH-HHHhcCCCcEEEEeCCC
Confidence 34444 799999999999999998777765 23456666655443 23 2222 33445799999985333
No 321
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=93.07 E-value=0.093 Score=46.29 Aligned_cols=77 Identities=14% Similarity=0.151 Sum_probs=55.7
Q ss_pred eeecCCccccCCCHHHHHHHHHcCC-c--EEEecccccchhhhcCCCCCCCChHHHHHHHhhc-CcceEeeccccchHHH
Q 037779 32 QMLRGGVIMDVVTPEQARIAEEAGA-C--AVMALERVPADIRAQGGVARMSDPQLIKQIKSSV-TIPVMAKARIGHFVEA 107 (310)
Q Consensus 32 ~~l~~g~i~~~~~~~~a~~~~~~Ga-~--~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~-~lPv~~kd~i~~~~~~ 107 (310)
++|..|+.. .+++.++.+.+.|. . .+.++ +- .|. ..+.+.++++++.+ ++|+++..+|.+.+++
T Consensus 130 ~rl~~~d~~--~~~~~~~~~a~~g~~~~~~~VYl-----~s---~G~--~~~~~~i~~i~~~~~~~Pv~vGgGI~t~e~a 197 (240)
T 1viz_A 130 AALTEADAD--LNMDDIVAYARVSELLQLPIFYL-----EY---SGV--LGDIEAVKKTKAVLETSTLFYGGGIKDAETA 197 (240)
T ss_dssp HHHTTBCCC--CCHHHHHHHHHHHHHTTCSEEEE-----EC---TTS--CCCHHHHHHHHHTCSSSEEEEESSCCSHHHH
T ss_pred EEeeccCCC--CCHHHHHHHHHhCcccCCCEEEE-----eC---CCc--cChHHHHHHHHHhcCCCCEEEEeccCCHHHH
Confidence 344444433 46788888888874 2 23355 11 232 44689999999999 9999999999888888
Q ss_pred HHHHHcCCCeee-ec
Q 037779 108 QILEAIGVDYVD-ES 121 (310)
Q Consensus 108 ~~~~~aGad~v~-~~ 121 (310)
+.+.+ |||.|+ .+
T Consensus 198 ~~~~~-gAd~VIVGS 211 (240)
T 1viz_A 198 KQYAE-HADVIVVGN 211 (240)
T ss_dssp HHHHT-TCSEEEECT
T ss_pred HHHHh-CCCEEEECh
Confidence 88888 999987 44
No 322
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=93.05 E-value=1.9 Score=36.35 Aligned_cols=102 Identities=14% Similarity=0.091 Sum_probs=61.3
Q ss_pred HHHHHHHHcCCCeeeecCC-CChhHHHHHHHh-cCCCCcEEe-ecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHH
Q 037779 105 VEAQILEAIGVDYVDESEV-LTPADEENHINK-HNFRVPFVC-GCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHV 181 (310)
Q Consensus 105 ~~~~~~~~aGad~v~~~~~-~~~~~~~~~~~~-~~~~l~v~~-~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~ 181 (310)
+.++.+.+.|++.+..... ....+.++.+.+ .+..+.+.. .+.+.+++..+.+.|+|.|.+. .
T Consensus 23 ~~~~~~~~~G~~~i~l~~~~~~~~~~i~~i~~~~~~~l~vg~g~~~~~~~i~~a~~~Gad~V~~~-~------------- 88 (212)
T 2v82_A 23 AHVGAVIDAGFDAVEIPLNSPQWEQSIPAIVDAYGDKALIGAGTVLKPEQVDALARMGCQLIVTP-N------------- 88 (212)
T ss_dssp HHHHHHHHHTCCEEEEETTSTTHHHHHHHHHHHHTTTSEEEEECCCSHHHHHHHHHTTCCEEECS-S-------------
T ss_pred HHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHhCCCCeEEEeccccCHHHHHHHHHcCCCEEEeC-C-------------
Confidence 4556777789999874322 122233333333 222333322 3567788899999999988532 1
Q ss_pred HHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEE
Q 037779 182 RSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFV 251 (310)
Q Consensus 182 ~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~V 251 (310)
.+.++++..++. ..++ +. | ++|++++.++.+.|+|.|.+
T Consensus 89 --------------------------~~~~~~~~~~~~-g~~~--~~-g-~~t~~e~~~a~~~G~d~v~v 127 (212)
T 2v82_A 89 --------------------------IHSEVIRRAVGY-GMTV--CP-G-CATATEAFTALEAGAQALKI 127 (212)
T ss_dssp --------------------------CCHHHHHHHHHT-TCEE--EC-E-ECSHHHHHHHHHTTCSEEEE
T ss_pred --------------------------CCHHHHHHHHHc-CCCE--Ee-e-cCCHHHHHHHHHCCCCEEEE
Confidence 012233444432 3455 21 3 88999999999999999986
No 323
>3m9y_A Triosephosphate isomerase; TIM barrel, glycolysis, gluconeogenesis, pentose; HET: CIT; 1.90A {Staphylococcus aureus} SCOP: c.1.1.1 PDB: 3uwv_A* 3uwu_A* 3uww_A* 3uwy_A 3uwz_A*
Probab=93.04 E-value=1.3 Score=39.32 Aligned_cols=36 Identities=28% Similarity=0.409 Sum_probs=30.9
Q ss_pred CCCEEEEccCCCCCHHHHHHHH-HcCCCEEEEccccccCC
Q 037779 221 RLPVVHFAAGGVATPADAAMMM-QLGCDGVFVGSGVFKSG 259 (310)
Q Consensus 221 ~iPVv~ia~GGI~t~~di~~~~-~~GadgV~VGsai~~~~ 259 (310)
.++| +..|++ +++++.+++ +.+.||++||++-.+++
T Consensus 208 ~~rI--lYGGSV-~~~N~~~l~~~~diDG~LVGgASL~~~ 244 (254)
T 3m9y_A 208 ATRI--QYGGSV-KPNNIKEYMAQTDIDGALVGGASLKVE 244 (254)
T ss_dssp TSEE--EECSCC-CTTTHHHHHTSTTCCEEEESGGGSSHH
T ss_pred CccE--EEcCCc-CHHHHHHHHcCCCCCeEEeeHHhhCHH
Confidence 5778 679999 799999999 56999999999998843
No 324
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=93.03 E-value=4.8 Score=36.04 Aligned_cols=83 Identities=18% Similarity=0.197 Sum_probs=46.9
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCCh---HHHHHHHhhc--CcceEeeccccc----hHHHHHHHHcCCC
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDP---QLIKQIKSSV--TIPVMAKARIGH----FVEAQILEAIGVD 116 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~---~~i~~i~~~~--~lPv~~kd~i~~----~~~~~~~~~aGad 116 (310)
+.++.+.+.|++++..+. .| +-+..+... +.++.+.+.+ ++||++...-.. .+.++.+.++|||
T Consensus 25 ~lv~~li~~Gv~gl~~~G--tt-----GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gad 97 (292)
T 2vc6_A 25 DLVEWQIEEGSFGLVPCG--TT-----GESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGAD 97 (292)
T ss_dssp HHHHHHHHTTCSEEETTS--GG-----GTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEECc--cc-----cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCC
Confidence 678889999999984331 01 001112222 2344444443 589988754432 2455677789999
Q ss_pred eee-ecCC---CChhHHHHHHHh
Q 037779 117 YVD-ESEV---LTPADEENHINK 135 (310)
Q Consensus 117 ~v~-~~~~---~~~~~~~~~~~~ 135 (310)
+++ .+.. .+..++.+.++.
T Consensus 98 avlv~~P~y~~~s~~~l~~~f~~ 120 (292)
T 2vc6_A 98 GVLIVSPYYNKPTQEGIYQHFKA 120 (292)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHH
T ss_pred EEEEcCCCCCCCCHHHHHHHHHH
Confidence 987 3322 244556655543
No 325
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=93.00 E-value=4.8 Score=36.00 Aligned_cols=83 Identities=19% Similarity=0.233 Sum_probs=46.6
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCCh---HHHHHHHhhc--CcceEeeccccc----hHHHHHHHHcCCC
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDP---QLIKQIKSSV--TIPVMAKARIGH----FVEAQILEAIGVD 116 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~---~~i~~i~~~~--~lPv~~kd~i~~----~~~~~~~~~aGad 116 (310)
+.++.+.+.|++++..+. ..+-+..+... +.++.+.+.+ ++||++...-.+ .+.++.+.++|||
T Consensus 26 ~lv~~li~~Gv~gl~~~G-------ttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gad 98 (291)
T 3tak_A 26 KLVEWHIEQGTNSIVAVG-------TTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGAD 98 (291)
T ss_dssp HHHHHHHHHTCCEEEESS-------TTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHCCCCEEEECc-------cccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCC
Confidence 678888999999985431 00100112222 2344444443 589998754332 2456677889999
Q ss_pred eee-ecCC---CChhHHHHHHHh
Q 037779 117 YVD-ESEV---LTPADEENHINK 135 (310)
Q Consensus 117 ~v~-~~~~---~~~~~~~~~~~~ 135 (310)
+++ .+.. .+.+.+.+.++.
T Consensus 99 avlv~~P~y~~~~~~~l~~~f~~ 121 (291)
T 3tak_A 99 AALLVTPYYNKPTQEGLYQHYKA 121 (291)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHH
T ss_pred EEEEcCCCCCCCCHHHHHHHHHH
Confidence 988 3322 234455555543
No 326
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=92.96 E-value=5.5 Score=36.61 Aligned_cols=83 Identities=13% Similarity=0.126 Sum_probs=47.2
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCC---hHHHHHHHhhc--CcceEeeccccc----hHHHHHHHHcCCC
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSD---PQLIKQIKSSV--TIPVMAKARIGH----FVEAQILEAIGVD 116 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~---~~~i~~i~~~~--~lPv~~kd~i~~----~~~~~~~~~aGad 116 (310)
+.++.+.+.|+++|..+- .| +-+..+.. .+.++.+.+.+ .+||++...-.. .+.++.+.++|||
T Consensus 56 ~lv~~li~~Gv~Gl~v~G--tT-----GE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gad 128 (343)
T 2v9d_A 56 ALIDDLIKAGVDGLFFLG--SG-----GEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGAD 128 (343)
T ss_dssp HHHHHHHHTTCSCEEESS--TT-----TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHcCCCEEEeCc--cc-----cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCC
Confidence 678888999999985441 00 00011212 22344444443 589998754332 2455677789999
Q ss_pred eee-ecCC---CChhHHHHHHHh
Q 037779 117 YVD-ESEV---LTPADEENHINK 135 (310)
Q Consensus 117 ~v~-~~~~---~~~~~~~~~~~~ 135 (310)
+++ .+.. .+.+.+.+.++.
T Consensus 129 avlv~~P~Y~~~s~~~l~~~f~~ 151 (343)
T 2v9d_A 129 GIVVINPYYWKVSEANLIRYFEQ 151 (343)
T ss_dssp EEEEECCSSSCCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCCHHHHHHHHHH
Confidence 987 3322 244556655544
No 327
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=92.84 E-value=5.1 Score=35.86 Aligned_cols=83 Identities=13% Similarity=0.139 Sum_probs=46.4
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCCh---HHHHHHHhhc--CcceEeeccccch----HHHHHHHHcCCC
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDP---QLIKQIKSSV--TIPVMAKARIGHF----VEAQILEAIGVD 116 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~---~~i~~i~~~~--~lPv~~kd~i~~~----~~~~~~~~aGad 116 (310)
+.++.+.+.|++++..+- .| +-+..+... +.++.+.+.+ ++||++...-... +.++.+.++|||
T Consensus 26 ~lv~~li~~Gv~gl~~~G--tt-----GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gad 98 (292)
T 2ojp_A 26 KLIDYHVASGTSAIVSVG--TT-----GESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIV 98 (292)
T ss_dssp HHHHHHHHHTCCEEEESS--TT-----TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCS
T ss_pred HHHHHHHHcCCCEEEECc--cc-----cchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCC
Confidence 678888999999985441 00 001112222 2344444443 5899887544322 344556669999
Q ss_pred eee-ecCC---CChhHHHHHHHh
Q 037779 117 YVD-ESEV---LTPADEENHINK 135 (310)
Q Consensus 117 ~v~-~~~~---~~~~~~~~~~~~ 135 (310)
+++ .+.. .+.+.+.+.++.
T Consensus 99 avlv~~P~y~~~s~~~l~~~f~~ 121 (292)
T 2ojp_A 99 GCLTVTPYYNRPSQEGLYQHFKA 121 (292)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCCHHHHHHHHHH
Confidence 987 3322 245556665554
No 328
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=92.83 E-value=1.2 Score=40.42 Aligned_cols=117 Identities=18% Similarity=0.163 Sum_probs=72.1
Q ss_pred cCcceEeeccc--cchHHHHHHHHcCCCeeeecCCCC-hhHHHHHHH---hc---CCCCcEEee----cCCH-HHHHHHH
Q 037779 91 VTIPVMAKARI--GHFVEAQILEAIGVDYVDESEVLT-PADEENHIN---KH---NFRVPFVCG----CRNL-GESLRRI 156 (310)
Q Consensus 91 ~~lPv~~kd~i--~~~~~~~~~~~aGad~v~~~~~~~-~~~~~~~~~---~~---~~~l~v~~~----v~t~-~ea~~a~ 156 (310)
.+.|++..... .+.+.+..+..+|+-.++....++ +.++.+.++ +. .+++.+++. -.+. +.++.+.
T Consensus 14 ~~~Pii~apM~gvs~~~la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~~~~~~~~ 93 (328)
T 2gjl_A 14 VEHPIMQGGMQWVGRAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAII 93 (328)
T ss_dssp CSSSEEECCCTTTCSHHHHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHCSSCCEEEEEECCCSSCCCHHHHHHHHH
T ss_pred CCCCEEECCCCCCCcHHHHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEeccccccCccHHHHHHHHH
Confidence 46788775433 345667777888876665332233 555444333 21 123444443 1233 4556677
Q ss_pred HhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHH
Q 037779 157 REGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPA 236 (310)
Q Consensus 157 ~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~ 236 (310)
+.|+|+|.++.. .+.++++.+++. .+|++ ..+.+++
T Consensus 94 ~~g~d~V~~~~g---------------------------------------~p~~~~~~l~~~-gi~vi----~~v~t~~ 129 (328)
T 2gjl_A 94 EAGIRVVETAGN---------------------------------------DPGEHIAEFRRH-GVKVI----HKCTAVR 129 (328)
T ss_dssp HTTCCEEEEEES---------------------------------------CCHHHHHHHHHT-TCEEE----EEESSHH
T ss_pred hcCCCEEEEcCC---------------------------------------CcHHHHHHHHHc-CCCEE----eeCCCHH
Confidence 889999887621 124455666654 56774 3477899
Q ss_pred HHHHHHHcCCCEEEE
Q 037779 237 DAAMMMQLGCDGVFV 251 (310)
Q Consensus 237 di~~~~~~GadgV~V 251 (310)
++..+.+.|+|+|++
T Consensus 130 ~a~~~~~~GaD~i~v 144 (328)
T 2gjl_A 130 HALKAERLGVDAVSI 144 (328)
T ss_dssp HHHHHHHTTCSEEEE
T ss_pred HHHHHHHcCCCEEEE
Confidence 999999999999999
No 329
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=92.76 E-value=4.9 Score=36.44 Aligned_cols=83 Identities=14% Similarity=0.123 Sum_probs=46.0
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCCh---HHHHHHHhhc--CcceEeeccccc---hHHHHHHHHcCCCe
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDP---QLIKQIKSSV--TIPVMAKARIGH---FVEAQILEAIGVDY 117 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~---~~i~~i~~~~--~lPv~~kd~i~~---~~~~~~~~~aGad~ 117 (310)
+.++.+.+.|++++..+. .| +-+..+... +.++.+.+.+ ++||++...-.. .+.++.+.++|||+
T Consensus 37 ~lv~~li~~Gv~gl~v~G--tT-----GE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~st~~ai~la~~A~~~Gada 109 (314)
T 3d0c_A 37 DNVEFLLQNGIEVIVPNG--NT-----GEFYALTIEEAKQVATRVTELVNGRATVVAGIGYSVDTAIELGKSAIDSGADC 109 (314)
T ss_dssp HHHHHHHHTTCSEECTTS--GG-----GTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHcCCCEEEECc--cc-----CChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCcCHHHHHHHHHHHHHcCCCE
Confidence 678889999999984331 01 001112222 2344444443 589998754422 23556677799999
Q ss_pred ee-ecCC---CChhHHHHHHHh
Q 037779 118 VD-ESEV---LTPADEENHINK 135 (310)
Q Consensus 118 v~-~~~~---~~~~~~~~~~~~ 135 (310)
++ .+.. .+...+.+.++.
T Consensus 110 vlv~~P~y~~~s~~~l~~~f~~ 131 (314)
T 3d0c_A 110 VMIHQPVHPYITDAGAVEYYRN 131 (314)
T ss_dssp EEECCCCCSCCCHHHHHHHHHH
T ss_pred EEECCCCCCCCCHHHHHHHHHH
Confidence 98 3322 244455555443
No 330
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=92.76 E-value=0.21 Score=46.74 Aligned_cols=93 Identities=13% Similarity=0.157 Sum_probs=61.0
Q ss_pred cccceeeecCCccccCCCHHHHHHHHHcCCcEEEecccccc--hh------hhcCC---CC-CCCChHHHHHHHhhc--C
Q 037779 27 KVGLAQMLRGGVIMDVVTPEQARIAEEAGACAVMALERVPA--DI------RAQGG---VA-RMSDPQLIKQIKSSV--T 92 (310)
Q Consensus 27 ~~~~~~~l~~g~i~~~~~~~~a~~~~~~Ga~~I~~l~~~~~--d~------r~~~G---~~-~~~~~~~i~~i~~~~--~ 92 (310)
..|+.++++-+.- +..-.++|+.++++|+++|+..|.... +. ...+| .. .....+.++++++.+ +
T Consensus 220 ~~Pv~vKi~p~~~-~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ 298 (367)
T 3zwt_A 220 RPAVLVKIAPDLT-SQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGR 298 (367)
T ss_dssp CCEEEEEECSCCC-HHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTC
T ss_pred CceEEEEeCCCCC-HHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCC
Confidence 4577777765421 101146899999999999976652110 00 01111 10 011246788999998 8
Q ss_pred cceEeeccccchHHHHHHHHcCCCeeee
Q 037779 93 IPVMAKARIGHFVEAQILEAIGVDYVDE 120 (310)
Q Consensus 93 lPv~~kd~i~~~~~~~~~~~aGad~v~~ 120 (310)
+||+....|.+.+++..+..+|||.|.+
T Consensus 299 ipvI~~GGI~s~~da~~~l~~GAd~V~v 326 (367)
T 3zwt_A 299 VPIIGVGGVSSGQDALEKIRAGASLVQL 326 (367)
T ss_dssp SCEEEESSCCSHHHHHHHHHHTCSEEEE
T ss_pred ceEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 9999999998878888888899999973
No 331
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=92.63 E-value=5.6 Score=36.03 Aligned_cols=83 Identities=13% Similarity=0.059 Sum_probs=46.6
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCCh---HHHHHHHhhc--CcceEeeccccc---hHHHHHHHHcCCCe
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDP---QLIKQIKSSV--TIPVMAKARIGH---FVEAQILEAIGVDY 117 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~---~~i~~i~~~~--~lPv~~kd~i~~---~~~~~~~~~aGad~ 117 (310)
+.++.+.+.|+++|..+- .|.+ +..+... +.++.+.+.+ .+||++...-.. .+.++.+.++|||+
T Consensus 37 ~lv~~li~~Gv~Gl~v~G--tTGE-----~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~~t~~ai~la~~A~~~Gada 109 (316)
T 3e96_A 37 ETVDRIVDNGIDVIVPCG--NTSE-----FYALSLEEAKEEVRRTVEYVHGRALVVAGIGYATSTAIELGNAAKAAGADA 109 (316)
T ss_dssp HHHHHHHTTTCCEECTTS--GGGT-----GGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHcCCCEEEeCc--cccC-----cccCCHHHHHHHHHHHHHHhCCCCcEEEEeCcCHHHHHHHHHHHHhcCCCE
Confidence 678889999999984331 0100 1112222 2344444443 589998754332 24556777899999
Q ss_pred eee-cCC---CChhHHHHHHHh
Q 037779 118 VDE-SEV---LTPADEENHINK 135 (310)
Q Consensus 118 v~~-~~~---~~~~~~~~~~~~ 135 (310)
++. +.. .+.+.+.+.++.
T Consensus 110 vlv~~P~y~~~s~~~l~~~f~~ 131 (316)
T 3e96_A 110 VMIHMPIHPYVTAGGVYAYFRD 131 (316)
T ss_dssp EEECCCCCSCCCHHHHHHHHHH
T ss_pred EEEcCCCCCCCCHHHHHHHHHH
Confidence 983 222 244555555543
No 332
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=92.56 E-value=0.8 Score=41.07 Aligned_cols=113 Identities=19% Similarity=0.151 Sum_probs=58.7
Q ss_pred HHHHHHHcCCcEEEecccccchhhhcCCCCC-CCChHHHHHHHhhc-CcceEeeccc----c----ch----HHHHHHHH
Q 037779 47 QARIAEEAGACAVMALERVPADIRAQGGVAR-MSDPQLIKQIKSSV-TIPVMAKARI----G----HF----VEAQILEA 112 (310)
Q Consensus 47 ~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~-~~~~~~i~~i~~~~-~lPv~~kd~i----~----~~----~~~~~~~~ 112 (310)
.++.+.+.|+|.| .++ ...+..... ..-.+.+..+|+.. ++|++.-.+- | .. +.++.+..
T Consensus 57 ~~~~~~~~gaD~V-ElR-----vD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~~~~~~ll~~~l~ 130 (276)
T 3o1n_A 57 EALAYREADFDIL-EWR-----VDHFANVTTAESVLEAAGAIREIITDKPLLFTFRSAKEGGEQALTTGQYIDLNRAAVD 130 (276)
T ss_dssp HHHHHTTSCCSEE-EEE-----GGGCTTTTCHHHHHHHHHHHHHHCCSSCEEEECCBGGGTCSBCCCHHHHHHHHHHHHH
T ss_pred HHHHHhhCCCCEE-EEE-----eccccccCcHHHHHHHHHHHHHhcCCCCEEEEEEEhhhCCCCCCCHHHHHHHHHHHHh
Confidence 3555666899987 442 112221100 00023455677776 8999874322 1 11 23344455
Q ss_pred cC-CCeeeecCCCChhHHHHHHHh--cCCCCcEEeecCCH------HHH----HHHHHhCCCEEEEe
Q 037779 113 IG-VDYVDESEVLTPADEENHINK--HNFRVPFVCGCRNL------GES----LRRIREGAAMIRTK 166 (310)
Q Consensus 113 aG-ad~v~~~~~~~~~~~~~~~~~--~~~~l~v~~~v~t~------~ea----~~a~~~Gad~I~v~ 166 (310)
.| +|+|.+.-. .+.+..+.+.. +..+..++++.|++ ++. .++.+.|||++++-
T Consensus 131 ~g~~dyIDvEl~-~~~~~~~~l~~~a~~~~~kvI~S~Hdf~~tP~~~el~~~~~~~~~~GaDIvKia 196 (276)
T 3o1n_A 131 SGLVDMIDLELF-TGDDEVKATVGYAHQHNVAVIMSNHDFHKTPAAEEIVQRLRKMQELGADIPKIA 196 (276)
T ss_dssp HTCCSEEEEEGG-GCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred cCCCCEEEEECc-CCHHHHHHHHHHHHhCCCEEEEEeecCCCCcCHHHHHHHHHHHHHcCCCEEEEE
Confidence 78 999974321 22333333321 23457777776632 233 34556799999875
No 333
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=92.56 E-value=0.41 Score=43.44 Aligned_cols=82 Identities=15% Similarity=0.135 Sum_probs=57.1
Q ss_pred cEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcC
Q 037779 141 PFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLG 220 (310)
Q Consensus 141 ~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~ 220 (310)
.++.++.+++.++.+.+.||+.+.+.-...+ . ...+. + .....+.+.++.+++..
T Consensus 23 gv~~d~~~~e~A~~ye~~GA~~lsvLe~~~~-D-----------------i~~~~--g-----~~R~~~~~~i~~i~~~v 77 (297)
T 4adt_A 23 GVIMDVKNVEQAKIAEKAGAIGVMILENIPS-E-----------------LRNTD--G-----VARSVDPLKIEEIRKCI 77 (297)
T ss_dssp CEEEEESSHHHHHHHHHHTCSEEEECCCCC-----------------------CC--C-----CCCCCCHHHHHHHHTTC
T ss_pred CcccCCCcHHHHHHHHHcCCCEEEEecCCCC-c-----------------chhcC--C-----cccCCCHHHHHHHHHhc
Confidence 4666888999999999999999887511000 0 00000 0 00123688889999988
Q ss_pred CCCEEEEccCCCCCHHHHHHHHHcCCCEE
Q 037779 221 RLPVVHFAAGGVATPADAAMMMQLGCDGV 249 (310)
Q Consensus 221 ~iPVv~ia~GGI~t~~di~~~~~~GadgV 249 (310)
++||+ +-++|...+.++.+.++|||.|
T Consensus 78 ~iPvl--~k~~i~~ide~qil~aaGAD~I 104 (297)
T 4adt_A 78 SINVL--AKVRIGHFVEAQILEELKVDML 104 (297)
T ss_dssp CSEEE--EEEETTCHHHHHHHHHTTCSEE
T ss_pred CCCEE--EeccCCcHHHHHHHHHcCCCEE
Confidence 99994 4578887888888889999999
No 334
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=92.53 E-value=0.6 Score=41.45 Aligned_cols=71 Identities=27% Similarity=0.264 Sum_probs=51.3
Q ss_pred CCHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeee
Q 037779 43 VTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVD 119 (310)
Q Consensus 43 ~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~ 119 (310)
.+++.++.+.+.|++.|..+.. .++......+++.++.+++.+++|+++...|.+.+.+..+.++|||+|+
T Consensus 135 ~~~~~a~~~~~~gad~v~~~~~------~~Gt~~~~~~~~~l~~i~~~~~iPviv~gGI~t~eda~~~~~~GAdgVi 205 (264)
T 1xm3_A 135 DDVVLARKLEELGVHAIMPGAS------PIGSGQGILNPLNLSFIIEQAKVPVIVDAGIGSPKDAAYAMELGADGVL 205 (264)
T ss_dssp SCHHHHHHHHHHTCSCBEECSS------STTCCCCCSCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHTTCSEEE
T ss_pred CCHHHHHHHHHhCCCEEEECCc------ccCCCCCCCCHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHcCCCEEE
Confidence 3467788888888887632210 0110011234788999999889999999888877888888999999998
No 335
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=92.49 E-value=0.19 Score=44.09 Aligned_cols=76 Identities=13% Similarity=0.181 Sum_probs=57.3
Q ss_pred eeeecCCccccCCCHHHHHHHHHcCCc----EEEecccccchhhhcCCCCCCCChHHHHHHHhhc-CcceEeeccccchH
Q 037779 31 AQMLRGGVIMDVVTPEQARIAEEAGAC----AVMALERVPADIRAQGGVARMSDPQLIKQIKSSV-TIPVMAKARIGHFV 105 (310)
Q Consensus 31 ~~~l~~g~i~~~~~~~~a~~~~~~Ga~----~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~-~lPv~~kd~i~~~~ 105 (310)
+++|.+|... .+++.++.+.+.|.. .+.++ +. .|. ..+.+.++++++.+ ++|+++..+|.+.+
T Consensus 136 ~~rl~~g~~~--~~~e~~~~~a~~g~~~l~~~~Vyl-----~~---~G~--~~~~~~i~~i~~~~~~~Pv~vGgGI~s~e 203 (234)
T 2f6u_A 136 VARVTKALCN--IDKELAASYALVGEKLFNLPIIYI-----EY---SGT--YGNPELVAEVKKVLDKARLFYGGGIDSRE 203 (234)
T ss_dssp HHHHTTBCCC--CCHHHHHHHHHHHHHTTCCSEEEE-----EC---TTS--CCCHHHHHHHHHHCSSSEEEEESCCCSHH
T ss_pred eEEeecCCCC--CCHHHHHHHHHhhhhhcCCCEEEE-----eC---CCC--cchHHHHHHHHHhCCCCCEEEEecCCCHH
Confidence 4455555554 367889999998872 33355 22 222 45689999999999 99999999998888
Q ss_pred HHHHHHHcCCCeee
Q 037779 106 EAQILEAIGVDYVD 119 (310)
Q Consensus 106 ~~~~~~~aGad~v~ 119 (310)
+++.+.+ |||.|+
T Consensus 204 ~a~~~~~-gAd~VI 216 (234)
T 2f6u_A 204 KAREMLR-YADTII 216 (234)
T ss_dssp HHHHHHH-HSSEEE
T ss_pred HHHHHHh-CCCEEE
Confidence 8888888 999987
No 336
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=92.48 E-value=0.71 Score=40.91 Aligned_cols=77 Identities=17% Similarity=0.295 Sum_probs=46.9
Q ss_pred eecCCHHHHHHHHHhCCCEEEEecC-CCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCC
Q 037779 144 CGCRNLGESLRRIREGAAMIRTKGE-AGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRL 222 (310)
Q Consensus 144 ~~v~t~~ea~~a~~~Gad~I~v~g~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~i 222 (310)
+.+.|.+++..|.+.|||=|=.... ..+ ++.+++.+++.+++..++
T Consensus 6 vc~~s~~~a~~A~~~GAdRIELc~~L~~G---------------------------------GlTPS~g~i~~~~~~~~i 52 (256)
T 1twd_A 6 ICCYSMECALTAQQNGADRVELCAAPKEG---------------------------------GLTPSLGVLKSVRQRVTI 52 (256)
T ss_dssp EEESSHHHHHHHHHTTCSEEEECBCGGGT---------------------------------CBCCCHHHHHHHHHHCCS
T ss_pred EEeCCHHHHHHHHHcCCCEEEEcCCcccC---------------------------------CCCCCHHHHHHHHHHcCC
Confidence 4567899999999999997765421 111 123455566666665667
Q ss_pred CEEEEc---cCCC-CCH-------HHHHHHHHcCCCEEEEcc
Q 037779 223 PVVHFA---AGGV-ATP-------ADAAMMMQLGCDGVFVGS 253 (310)
Q Consensus 223 PVv~ia---~GGI-~t~-------~di~~~~~~GadgV~VGs 253 (310)
||.++. .|+- .|. +|+..+.++|+|||++|-
T Consensus 53 pv~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV~G~ 94 (256)
T 1twd_A 53 PVHPIIRPRGGDFCYSDGEFAAILEDVRTVRELGFPGLVTGV 94 (256)
T ss_dssp CEEEBCCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECC
T ss_pred ceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEEEee
Confidence 765442 2222 222 245666677888887774
No 337
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=92.40 E-value=5.7 Score=35.43 Aligned_cols=83 Identities=22% Similarity=0.283 Sum_probs=46.7
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCCh---HHHHHHHhhc--CcceEeeccccc----hHHHHHHHHcCCC
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDP---QLIKQIKSSV--TIPVMAKARIGH----FVEAQILEAIGVD 116 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~---~~i~~i~~~~--~lPv~~kd~i~~----~~~~~~~~~aGad 116 (310)
+.++.+.+.|++++..+. .| +-+..+... +.++.+.+.+ ++||++...-.. .+.++.+.++|||
T Consensus 25 ~lv~~li~~Gv~gl~~~G--tt-----GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gad 97 (289)
T 2yxg_A 25 ENINFLIENGVSGIVAVG--TT-----GESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGAD 97 (289)
T ss_dssp HHHHHHHHTTCSEEEESS--TT-----TTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHCCCCEEEECc--cc-----cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCC
Confidence 678888999999985441 00 001112222 2344444443 589988754432 2455677789999
Q ss_pred eee-ecCC---CChhHHHHHHHh
Q 037779 117 YVD-ESEV---LTPADEENHINK 135 (310)
Q Consensus 117 ~v~-~~~~---~~~~~~~~~~~~ 135 (310)
+++ .+.. .+.+.+.+.++.
T Consensus 98 avlv~~P~y~~~s~~~l~~~f~~ 120 (289)
T 2yxg_A 98 AVLSITPYYNKPTQEGLRKHFGK 120 (289)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCCHHHHHHHHHH
Confidence 987 3322 244455555543
No 338
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=92.23 E-value=5.2 Score=36.97 Aligned_cols=130 Identities=8% Similarity=0.007 Sum_probs=78.7
Q ss_pred HHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeeee-cCCCChhHHHHHHHhcCCCCcEEee--cCCHHHHHHHHH-
Q 037779 82 QLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVDE-SEVLTPADEENHINKHNFRVPFVCG--CRNLGESLRRIR- 157 (310)
Q Consensus 82 ~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~~-~~~~~~~~~~~~~~~~~~~l~v~~~--v~t~~ea~~a~~- 157 (310)
..+.+.++..+++++.--+ +...++.+.+.|+|.+-+ +..++...+++.+.+ .+.+++++ ..|.+|...+++
T Consensus 94 ~~L~~~~~~~Gi~~~st~~--d~~svd~l~~~~v~~~KI~S~~~~n~~LL~~va~--~gkPviLstGmat~~Ei~~Ave~ 169 (349)
T 2wqp_A 94 IKLKEYVESKGMIFISTLF--SRAAALRLQRMDIPAYKIGSGECNNYPLIKLVAS--FGKPIILSTGMNSIESIKKSVEI 169 (349)
T ss_dssp HHHHHHHHHTTCEEEEEEC--SHHHHHHHHHHTCSCEEECGGGTTCHHHHHHHHT--TCSCEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCeEEEeeC--CHHHHHHHHhcCCCEEEECcccccCHHHHHHHHh--cCCeEEEECCCCCHHHHHHHHHH
Confidence 3455667778898876544 335667788899999863 344556667776765 35666664 678888876653
Q ss_pred ---hCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcC-CCCEEEEccCCCC
Q 037779 158 ---EGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLG-RLPVVHFAAGGVA 233 (310)
Q Consensus 158 ---~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~-~iPVv~ia~GGI~ 233 (310)
.|.+++-.++.. .+++ +++ ..+...+..+++.. ++||. ..+=..+
T Consensus 170 i~~~G~~iiLlhc~s--------------------~Yp~-~~~---------~~nL~ai~~lk~~f~~lpVg-~sdHt~G 218 (349)
T 2wqp_A 170 IREAGVPYALLHCTN--------------------IYPT-PYE---------DVRLGGMNDLSEAFPDAIIG-LSDHTLD 218 (349)
T ss_dssp HHHHTCCEEEEECCC--------------------CSSC-CGG---------GCCTHHHHHHHHHCTTSEEE-EECCSSS
T ss_pred HHHcCCCEEEEeccC--------------------CCCC-Chh---------hcCHHHHHHHHHHCCCCCEE-eCCCCCc
Confidence 577777665321 1121 111 12445667777765 78984 3322222
Q ss_pred CHHHHHHHHHcCCC
Q 037779 234 TPADAAMMMQLGCD 247 (310)
Q Consensus 234 t~~di~~~~~~Gad 247 (310)
..-...+..+||+
T Consensus 219 -~~~~~AAvAlGA~ 231 (349)
T 2wqp_A 219 -NYACLGAVALGGS 231 (349)
T ss_dssp -SHHHHHHHHHTCC
T ss_pred -HHHHHHHHHhCCC
Confidence 3445566789999
No 339
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=92.23 E-value=0.85 Score=40.76 Aligned_cols=89 Identities=19% Similarity=0.176 Sum_probs=55.2
Q ss_pred ceEEEEeccCCCccccccceeeecCCccccCCC--HHHHHHHHHcCCcEEEecccccc---hhhhcCCCCCCCChHHHHH
Q 037779 12 NGAIYETTKKSPFSVKVGLAQMLRGGVIMDVVT--PEQARIAEEAGACAVMALERVPA---DIRAQGGVARMSDPQLIKQ 86 (310)
Q Consensus 12 ~~~i~e~k~~sp~~~~~~~~~~l~~g~i~~~~~--~~~a~~~~~~Ga~~I~~l~~~~~---d~r~~~G~~~~~~~~~i~~ 86 (310)
.-+|.|+--.+|-++ ..|......+ .+.|+.+.+.||+.| +++-.+. +.... ...++.
T Consensus 10 ~~iigEilN~Tpdsf--------~dg~~~~~~~~a~~~a~~~v~~GAdiI-DIg~~s~~~eE~~rv--------~~vi~~ 72 (271)
T 2yci_X 10 FIMIGERINGMFKDI--------REAILNKDPRPIQEWARRQAEKGAHYL-DVNTGPTADDPVRVM--------EWLVKT 72 (271)
T ss_dssp CEEEEEEEETTSHHH--------HHHHHTTCCHHHHHHHHHHHHTTCSEE-EEECCSCSSCHHHHH--------HHHHHH
T ss_pred CEEEEEecCCChhhH--------HHhhhhCCHHHHHHHHHHHHHCCCCEE-EEcCCcCchhHHHHH--------HHHHHH
Confidence 457899888888331 1122111122 367999999999998 6641111 11111 334567
Q ss_pred HHhhcCcceEeeccccchHHHHHHHHc--CCCeee
Q 037779 87 IKSSVTIPVMAKARIGHFVEAQILEAI--GVDYVD 119 (310)
Q Consensus 87 i~~~~~lPv~~kd~i~~~~~~~~~~~a--Gad~v~ 119 (310)
+++.+++|+++-.. +.+-++.+.++ |++.|.
T Consensus 73 l~~~~~~pisIDT~--~~~v~~aal~a~~Ga~iIN 105 (271)
T 2yci_X 73 IQEVVDLPCCLDST--NPDAIEAGLKVHRGHAMIN 105 (271)
T ss_dssp HHHHCCCCEEEECS--CHHHHHHHHHHCCSCCEEE
T ss_pred HHHhCCCeEEEeCC--CHHHHHHHHHhCCCCCEEE
Confidence 77777999988655 34566777777 999997
No 340
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=92.08 E-value=6 Score=34.95 Aligned_cols=176 Identities=13% Similarity=0.122 Sum_probs=96.0
Q ss_pred HHHHHHHHcCCcEEEeccccc-chhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeeeec-CC
Q 037779 46 EQARIAEEAGACAVMALERVP-ADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVDES-EV 123 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~-~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~~~-~~ 123 (310)
++++.+.++|++++-.--+.| |.+..|.|.. ......++++++..++|++.-.+- ...++.+.+. +|.+-+. ..
T Consensus 41 ~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~-~egl~~l~~~~~~~Gl~~~te~~d--~~~~~~l~~~-vd~~kIga~~ 116 (262)
T 1zco_A 41 KVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYG-EKALRWMREAADEYGLVTVTEVMD--TRHVELVAKY-SDILQIGARN 116 (262)
T ss_dssp HHHHHHHHTTCCEEECBSSCCCSSTTSCCCCT-HHHHHHHHHHHHHHTCEEEEECCC--GGGHHHHHHH-CSEEEECGGG
T ss_pred HHHHHHHHcCCCEEEEEecccCCCcccccCcc-HHHHHHHHHHHHHcCCcEEEeeCC--HHhHHHHHhh-CCEEEECccc
Confidence 679999999999872110111 1111112211 122445667777789999775332 2346667777 8888744 33
Q ss_pred CChhHHHHHHHhcCCCCcEEee--cC-CHHHHHHHHH----hCC-CEEEEe-cCCCCCchHHHHHHHHHhhcceeccccc
Q 037779 124 LTPADEENHINKHNFRVPFVCG--CR-NLGESLRRIR----EGA-AMIRTK-GEAGTGNIVEAVRHVRSVMGDIRVLRNM 194 (310)
Q Consensus 124 ~~~~~~~~~~~~~~~~l~v~~~--v~-t~~ea~~a~~----~Ga-d~I~v~-g~~~~~~~~~~~~~~~~~~~~~~~l~~~ 194 (310)
.....+.+.+.+ .+.++++. .. |++|+..+++ .|. +++-.+ |-...+ .+
T Consensus 117 ~~n~~ll~~~a~--~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~-------------------~y- 174 (262)
T 1zco_A 117 SQNFELLKEVGK--VENPVLLKRGMGNTIQELLYSAEYIMAQGNENVILCERGIRTFE-------------------TA- 174 (262)
T ss_dssp TTCHHHHHHHTT--SSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSC-------------------CS-
T ss_pred ccCHHHHHHHHh--cCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCC-------------------Cc-
Confidence 344455555544 56777775 44 7888877663 455 454444 210100 11
Q ss_pred CchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCH----HHHHHHHHcCCCEEEEccccc
Q 037779 195 DDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATP----ADAAMMMQLGCDGVFVGSGVF 256 (310)
Q Consensus 195 ~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~----~di~~~~~~GadgV~VGsai~ 256 (310)
+. ...+...+..+++..++||+..++=+-+.. .-...+..+|++|+++=+-+.
T Consensus 175 ~~---------~~v~L~ai~~lk~~~~~pVi~d~sH~~g~~~~v~~~~~aAva~Ga~Gl~iE~H~~ 231 (262)
T 1zco_A 175 TR---------FTLDISAVPVVKELSHLPIIVDPSHPAGRRSLVIPLAKAAYAIGADGIMVEVHPE 231 (262)
T ss_dssp SS---------SBCCTTHHHHHHHHBSSCEEECSSTTTCSGGGHHHHHHHHHHTTCSEEEEEBCSS
T ss_pred Ch---------hhcCHHHHHHHHhhhCCCEEEEcCCCCCccchHHHHHHHHHHcCCCEEEEEecCC
Confidence 10 112333455566655689854332222221 224556789999999999864
No 341
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=92.07 E-value=6.5 Score=35.28 Aligned_cols=82 Identities=15% Similarity=0.173 Sum_probs=46.0
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCCh---HHHHHHHhhc--CcceEeeccccc----hHHHHHHHHcCCC
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDP---QLIKQIKSSV--TIPVMAKARIGH----FVEAQILEAIGVD 116 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~---~~i~~i~~~~--~lPv~~kd~i~~----~~~~~~~~~aGad 116 (310)
+.++.+.+.|++++..+. .|.+ +..+... +.++.+.+.+ ++||++...-.. .+.++.+.++|||
T Consensus 25 ~lv~~li~~Gv~gi~v~G--ttGE-----~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gad 97 (297)
T 2rfg_A 25 GLVDWQIKHGAHGLVPVG--TTGE-----SPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGAD 97 (297)
T ss_dssp HHHHHHHHTTCSEEECSS--GGGT-----GGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHcCCCEEEECc--cccc-----hhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcCCC
Confidence 678888999999984431 0100 1112222 2344444443 589988754432 2455677789999
Q ss_pred eee-ecCC---CChhHHHHHHH
Q 037779 117 YVD-ESEV---LTPADEENHIN 134 (310)
Q Consensus 117 ~v~-~~~~---~~~~~~~~~~~ 134 (310)
+++ .+.. .+.+.+.+.++
T Consensus 98 avlv~~P~y~~~s~~~l~~~f~ 119 (297)
T 2rfg_A 98 AVLCVAGYYNRPSQEGLYQHFK 119 (297)
T ss_dssp EEEECCCTTTCCCHHHHHHHHH
T ss_pred EEEEcCCCCCCCCHHHHHHHHH
Confidence 998 3322 23445555444
No 342
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=92.02 E-value=0.39 Score=44.24 Aligned_cols=90 Identities=12% Similarity=-0.027 Sum_probs=58.5
Q ss_pred ccceeeecCCccccC-CC----HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeecccc
Q 037779 28 VGLAQMLRGGVIMDV-VT----PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIG 102 (310)
Q Consensus 28 ~~~~~~l~~g~i~~~-~~----~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~ 102 (310)
.++..+|+.....+. .+ .++++.++++|+++|...++.........+. ..+.+.++++++.+++||+....+.
T Consensus 210 ~pv~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~--~~~~~~~~~ir~~~~iPVi~~Ggi~ 287 (338)
T 1z41_A 210 GPLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFP--GYQVSFAEKIREQADMATGAVGMIT 287 (338)
T ss_dssp SCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCT--TTTHHHHHHHHHHHCCEEEECSSCC
T ss_pred CcEEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCc--cchHHHHHHHHHHCCCCEEEECCCC
Confidence 356666665432221 12 3679999999999985542110000000010 1136788999999999999998887
Q ss_pred chHHHHHHHHcC-CCeee
Q 037779 103 HFVEAQILEAIG-VDYVD 119 (310)
Q Consensus 103 ~~~~~~~~~~aG-ad~v~ 119 (310)
+.+.++.+.+.| ||.|.
T Consensus 288 s~~~a~~~l~~G~aD~V~ 305 (338)
T 1z41_A 288 DGSMAEEILQNGRADLIF 305 (338)
T ss_dssp SHHHHHHHHHTTSCSEEE
T ss_pred CHHHHHHHHHcCCceEEe
Confidence 777888888888 99987
No 343
>2v5b_A Triosephosphate isomerase; TIM, unfolding, monotctim, glycosome, gluconeogenesis, lipid synthesis, monomeric mutant, glycolysis, pentose shunt; 2.00A {Trypanosoma cruzi}
Probab=91.99 E-value=3.6 Score=36.08 Aligned_cols=39 Identities=28% Similarity=0.500 Sum_probs=31.9
Q ss_pred CCCEEEEccCCCCCHHHHHHHHHc-CCCEEEEccccccCCCHHH
Q 037779 221 RLPVVHFAAGGVATPADAAMMMQL-GCDGVFVGSGVFKSGDPVR 263 (310)
Q Consensus 221 ~iPVv~ia~GGI~t~~di~~~~~~-GadgV~VGsai~~~~dp~~ 263 (310)
.++| +..|++ +++++.+++.. ..||++||++=.+ ++...
T Consensus 199 ~vrI--lYGGSV-~~~N~~~l~~~~diDG~LVGgASL~-~~F~~ 238 (244)
T 2v5b_A 199 QLRI--LYGGSV-TAKNARTLYQMRDINGFLVGGASLK-PEFVE 238 (244)
T ss_dssp HCEE--EECSCC-CHHHHHHHHTSTTCCEEEESGGGSS-TTHHH
T ss_pred cccE--EEcCCC-CHhHHHHHhcCCCCCeeeechHHHH-HHHHH
Confidence 3677 678999 59999999974 8999999999888 66443
No 344
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=91.86 E-value=1.7 Score=39.62 Aligned_cols=117 Identities=18% Similarity=0.131 Sum_probs=69.4
Q ss_pred cCcceEeeccc--cchHHHHHHHHcCCCeeeecCCCChhHHHHHHHh-c-CCCCcEEeec----CCH-HHHHHHHHhCCC
Q 037779 91 VTIPVMAKARI--GHFVEAQILEAIGVDYVDESEVLTPADEENHINK-H-NFRVPFVCGC----RNL-GESLRRIREGAA 161 (310)
Q Consensus 91 ~~lPv~~kd~i--~~~~~~~~~~~aGad~v~~~~~~~~~~~~~~~~~-~-~~~l~v~~~v----~t~-~ea~~a~~~Gad 161 (310)
...|++...+. .+.+.+..+.++|+-.++.....++..+.+.+++ . ..+.++.+.+ .+. +.++.+.+.|+|
T Consensus 11 ~~~Pii~apM~g~s~~~la~av~~aG~lG~i~~~~~~~~~~~~~i~~i~~~~~~p~gvnl~~~~~~~~~~~~~a~~~g~d 90 (332)
T 2z6i_A 11 IDYPIFQGGMAWVADGDLAGAVSKAGGLGIIGGGNAPKEVVKANIDKIKSLTDKPFGVNIMLLSPFVEDIVDLVIEEGVK 90 (332)
T ss_dssp CSSSEEECCCTTTCCHHHHHHHHHHTSBEEEECTTCCHHHHHHHHHHHHHHCCSCEEEEECTTSTTHHHHHHHHHHTTCS
T ss_pred CCCCEEeCCCCCCCcHHHHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHhcCCCEEEEecCCCCCHHHHHHHHHHCCCC
Confidence 46787664333 3456667777788865554444466555444433 1 1123344432 222 345667789999
Q ss_pred EEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHH
Q 037779 162 MIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMM 241 (310)
Q Consensus 162 ~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~ 241 (310)
+|.+++. . +.++++.+++. .+||+ ..+.+++.+..+
T Consensus 91 ~V~~~~g----~-----------------------------------p~~~i~~l~~~-g~~v~----~~v~~~~~a~~~ 126 (332)
T 2z6i_A 91 VVTTGAG----N-----------------------------------PSKYMERFHEA-GIIVI----PVVPSVALAKRM 126 (332)
T ss_dssp EEEECSS----C-----------------------------------GGGTHHHHHHT-TCEEE----EEESSHHHHHHH
T ss_pred EEEECCC----C-----------------------------------hHHHHHHHHHc-CCeEE----EEeCCHHHHHHH
Confidence 9988631 1 12234445442 56774 236788999999
Q ss_pred HHcCCCEEEE
Q 037779 242 MQLGCDGVFV 251 (310)
Q Consensus 242 ~~~GadgV~V 251 (310)
.+.|+|++.+
T Consensus 127 ~~~GaD~i~v 136 (332)
T 2z6i_A 127 EKIGADAVIA 136 (332)
T ss_dssp HHTTCSCEEE
T ss_pred HHcCCCEEEE
Confidence 9999999999
No 345
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=91.85 E-value=3.2 Score=38.41 Aligned_cols=176 Identities=13% Similarity=0.114 Sum_probs=96.7
Q ss_pred HHHHHHHHcCCcEEEeccccc-chhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeeeec-CC
Q 037779 46 EQARIAEEAGACAVMALERVP-ADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVDES-EV 123 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~-~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~~~-~~ 123 (310)
++|+.+.++|++.+-.--+.| |.+..|.|.. ...+..+++.++..++|++.-.+ +...++.+.+. +|.+-+. ..
T Consensus 124 ~~a~~~k~aGa~~vr~q~fKprTs~~~f~glg-~egl~~l~~~~~e~Gl~~~te~~--d~~~~~~l~~~-vd~lkIgAr~ 199 (350)
T 1vr6_A 124 ETAHFLSELGVKVLRGGAYKPRTSPYSFQGLG-EKGLEYLREAADKYGMYVVTEAL--GEDDLPKVAEY-ADIIQIGARN 199 (350)
T ss_dssp HHHHHHHHTTCCEEECBSCCCCCSTTSCCCCT-HHHHHHHHHHHHHHTCEEEEECS--SGGGHHHHHHH-CSEEEECGGG
T ss_pred HHHHHHHHcCCCeeeeeEEeCCCChHhhcCCC-HHHHHHHHHHHHHcCCcEEEEeC--CHHHHHHHHHh-CCEEEECccc
Confidence 679999999999861110111 1122233321 12245566777788999977533 22455666677 8888744 33
Q ss_pred CChhHHHHHHHhcCCCCcEEee--cC-CHHHHHHHHH----hCC-CEEEEe-cC-CCCCchHHHHHHHHHhhcceecccc
Q 037779 124 LTPADEENHINKHNFRVPFVCG--CR-NLGESLRRIR----EGA-AMIRTK-GE-AGTGNIVEAVRHVRSVMGDIRVLRN 193 (310)
Q Consensus 124 ~~~~~~~~~~~~~~~~l~v~~~--v~-t~~ea~~a~~----~Ga-d~I~v~-g~-~~~~~~~~~~~~~~~~~~~~~~l~~ 193 (310)
.....+.+.+.+ .+.+++++ .. |++|...+++ .|. +++-.. |. .|.+
T Consensus 200 ~~n~~LL~~va~--~~kPVilk~G~~~tl~ei~~Ave~i~~~GN~~viLceRG~~typ~--------------------- 256 (350)
T 1vr6_A 200 AQNFRLLSKAGS--YNKPVLLKRGFMNTIEEFLLSAEYIANSGNTKIILCERGIRTFEK--------------------- 256 (350)
T ss_dssp TTCHHHHHHHHT--TCSCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCC---------------------
T ss_pred ccCHHHHHHHHc--cCCcEEEcCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCC---------------------
Confidence 445556666654 46777775 44 6677776654 465 554432 22 1211
Q ss_pred cCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEcc--CCCCC--HHHHHHHHHcCCCEEEEcccccc
Q 037779 194 MDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAA--GGVAT--PADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 194 ~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~--GGI~t--~~di~~~~~~GadgV~VGsai~~ 257 (310)
-+. ...+...+..+++..++||+..++ +|-.. +.-...+..+||+|+++=+-+.-
T Consensus 257 ~~~---------~~vdl~ai~~lk~~~~lpVi~dssHs~G~~~~v~~~a~AAvA~GA~Gl~IE~H~~p 315 (350)
T 1vr6_A 257 ATR---------NTLDISAVPIIRKESHLPILVDPSHSGGRRDLVIPLSRAAIAVGAHGIIVEVHPEP 315 (350)
T ss_dssp SSS---------SBCCTTHHHHHHHHBSSCEEECHHHHHCSGGGHHHHHHHHHHHTCSEEEEEBCSCG
T ss_pred cCh---------hhhhHHHHHHHHHhhCCCEEEeCCCCCcccchHHHHHHHHHHhCCCEEEEEecCCc
Confidence 000 112334455566655689843222 13211 22344556789999999987753
No 346
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=91.77 E-value=0.28 Score=44.42 Aligned_cols=90 Identities=16% Similarity=0.104 Sum_probs=57.8
Q ss_pred ccceeeecCCccccCCC-HHHHHHHHHcCCcEEEecccc----cchhh----------hcC---CCC-CCCChHHHHHHH
Q 037779 28 VGLAQMLRGGVIMDVVT-PEQARIAEEAGACAVMALERV----PADIR----------AQG---GVA-RMSDPQLIKQIK 88 (310)
Q Consensus 28 ~~~~~~l~~g~i~~~~~-~~~a~~~~~~Ga~~I~~l~~~----~~d~r----------~~~---G~~-~~~~~~~i~~i~ 88 (310)
.|+..+++.+. +..+ .++++.+.++|+++|...|.. ..+.+ .++ |.. .....+.+++++
T Consensus 159 ~Pv~vKi~~~~--~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~ 236 (311)
T 1jub_A 159 KPLGVKLPPYF--DLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFY 236 (311)
T ss_dssp SCEEEEECCCC--SHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHH
T ss_pred CCEEEEECCCC--CHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHH
Confidence 46666666542 1111 356999999999998554421 01100 111 210 001256788899
Q ss_pred hhc--CcceEeeccccchHHHHHHHHcCCCeee
Q 037779 89 SSV--TIPVMAKARIGHFVEAQILEAIGVDYVD 119 (310)
Q Consensus 89 ~~~--~lPv~~kd~i~~~~~~~~~~~aGad~v~ 119 (310)
+.+ ++||+....+.+.+++..+..+|||.|.
T Consensus 237 ~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~ 269 (311)
T 1jub_A 237 TRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQ 269 (311)
T ss_dssp TTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEE
T ss_pred HhcCCCCCEEEECCCCCHHHHHHHHHcCCCEEE
Confidence 888 8999999999877788777789999997
No 347
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=91.55 E-value=2 Score=37.92 Aligned_cols=111 Identities=13% Similarity=0.058 Sum_probs=58.8
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCCh----HHHHHHHhhc-CcceEeeccc---------cch----HHH
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDP----QLIKQIKSSV-TIPVMAKARI---------GHF----VEA 107 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~----~~i~~i~~~~-~lPv~~kd~i---------~~~----~~~ 107 (310)
+.++.+.+.|+|.+ -++ ...+.. ..+. +.+..+++.. ++|++.-.+- +.. +.+
T Consensus 36 ~~~~~~~~~~~D~v-ElR-----vD~l~~---~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~~~~~~~ll 106 (257)
T 2yr1_A 36 REAEEVCRKQPDLL-EWR-----ADFFRA---IDDQERVLATANGLRNIAGEIPILFTIRSEREGGQPIPLNEAEVRRLI 106 (257)
T ss_dssp HHHHHHHHSCCSEE-EEE-----GGGCTT---TTCHHHHHHHHHHHHHHSSSCCEEEECCCTTTTCCCCSSCHHHHHHHH
T ss_pred HHHHHHhhcCCCEE-EEE-----eecccc---cCcHHHHHHHHHHHHHhccCCCEEEEEeecccCCCCCCCCHHHHHHHH
Confidence 44666677899987 442 112211 1112 2445677776 8999874321 111 233
Q ss_pred HHHHHcC-CCeeeecCCCChhHHHHHHHh-cCCCCcEEeecCC----H--HHH----HHHHHhCCCEEEEe
Q 037779 108 QILEAIG-VDYVDESEVLTPADEENHINK-HNFRVPFVCGCRN----L--GES----LRRIREGAAMIRTK 166 (310)
Q Consensus 108 ~~~~~aG-ad~v~~~~~~~~~~~~~~~~~-~~~~l~v~~~v~t----~--~ea----~~a~~~Gad~I~v~ 166 (310)
+.+...| +|+|.+.-... ..+.+.+.. +..+..++++-|+ + ++. .++.+.|||++++-
T Consensus 107 ~~~~~~g~~d~iDvEl~~~-~~~~~l~~~~~~~~~kvI~S~Hdf~~tP~~~el~~~~~~~~~~gaDivKia 176 (257)
T 2yr1_A 107 EAICRSGAIDLVDYELAYG-ERIADVRRMTEECSVWLVVSRHYFDGTPRKETLLADMRQAERYGADIAKVA 176 (257)
T ss_dssp HHHHHHTCCSEEEEEGGGT-THHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHcCCCCEEEEECCCC-hhHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHHHHHHhcCCCEEEEE
Confidence 4445578 99997321111 122222321 2345777777663 3 333 34556899999875
No 348
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=91.54 E-value=1.3 Score=39.23 Aligned_cols=112 Identities=20% Similarity=0.146 Sum_probs=61.5
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCC-CCCChHHHHHHHh---hcCcceEeecccc--------chH---H-HHH
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVA-RMSDPQLIKQIKS---SVTIPVMAKARIG--------HFV---E-AQI 109 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~-~~~~~~~i~~i~~---~~~lPv~~kd~i~--------~~~---~-~~~ 109 (310)
..++.+.+.|+++|+.. .+-|+. .....+.++++++ ..++|+++..... +.+ . ++.
T Consensus 96 ~~ve~Ai~~Ga~~v~~~--------~nig~~~~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~ 167 (263)
T 1w8s_A 96 CSVEEAVSLGASAVGYT--------IYPGSGFEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYAARI 167 (263)
T ss_dssp SCHHHHHHTTCSEEEEE--------ECTTSTTHHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEE--------EecCCcCHHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHHHHH
Confidence 56888889999999432 111110 0001334444443 3479998876551 111 2 356
Q ss_pred HHHcCCCeeeecCCCChhHHHHHHHhcCCCCcEEe--ecC--CHHHHHHHH----HhCCCEEEEe
Q 037779 110 LEAIGVDYVDESEVLTPADEENHINKHNFRVPFVC--GCR--NLGESLRRI----REGAAMIRTK 166 (310)
Q Consensus 110 ~~~aGad~v~~~~~~~~~~~~~~~~~~~~~l~v~~--~v~--t~~ea~~a~----~~Gad~I~v~ 166 (310)
+.++|||+|-.+-..++ +.++.+.+.-..+++.+ +++ |.+++.... +.|++-+.+.
T Consensus 168 a~~~GAD~vkt~~~~~~-e~~~~~~~~~~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~Gvsvg 231 (263)
T 1w8s_A 168 ALELGADAMKIKYTGDP-KTFSWAVKVAGKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVG 231 (263)
T ss_dssp HHHHTCSEEEEECCSSH-HHHHHHHHHTTTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEES
T ss_pred HHHcCCCEEEEcCCCCH-HHHHHHHHhCCCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 67799999864321133 33444443222225444 477 788776555 7899966553
No 349
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=91.35 E-value=7.7 Score=34.69 Aligned_cols=83 Identities=13% Similarity=0.089 Sum_probs=46.7
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCCh---HHHHHHHhhc--CcceEeeccccc----hHHHHHHHHcCCC
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDP---QLIKQIKSSV--TIPVMAKARIGH----FVEAQILEAIGVD 116 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~---~~i~~i~~~~--~lPv~~kd~i~~----~~~~~~~~~aGad 116 (310)
+.++.+.+.|++++..+. .| +-+..+... +.++.+.+.+ .+||++...-.. .+.++.+.++|||
T Consensus 25 ~lv~~li~~Gv~gl~~~G--tt-----GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gad 97 (294)
T 2ehh_A 25 NLIEFHVDNGTDAILVCG--TT-----GESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGAD 97 (294)
T ss_dssp HHHHHHHTTTCCEEEESS--TT-----TTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHCCCCEEEECc--cc-----cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCC
Confidence 678888999999985441 01 001112222 2344444443 589988754432 2455677789999
Q ss_pred eee-ecCC---CChhHHHHHHHh
Q 037779 117 YVD-ESEV---LTPADEENHINK 135 (310)
Q Consensus 117 ~v~-~~~~---~~~~~~~~~~~~ 135 (310)
+++ .+.. .+.+.+.+.++.
T Consensus 98 avlv~~P~y~~~s~~~l~~~f~~ 120 (294)
T 2ehh_A 98 GALVVVPYYNKPTQRGLYEHFKT 120 (294)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCCHHHHHHHHHH
Confidence 987 3322 244555555543
No 350
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=91.32 E-value=8 Score=34.85 Aligned_cols=83 Identities=8% Similarity=0.075 Sum_probs=46.9
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCC---hHHHHHHHhhc--CcceEeeccccc----hHHHHHHHHcCCC
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSD---PQLIKQIKSSV--TIPVMAKARIGH----FVEAQILEAIGVD 116 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~---~~~i~~i~~~~--~lPv~~kd~i~~----~~~~~~~~~aGad 116 (310)
+.++.+.+.|++++..+- .|.+ +..+.. .+.++.+.+.+ ++||++...-.. .+.++.+.++|||
T Consensus 39 ~lv~~li~~Gv~Gl~v~G--tTGE-----~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gad 111 (307)
T 3s5o_A 39 ENLHKLGTFPFRGFVVQG--SNGE-----FPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGAD 111 (307)
T ss_dssp HHHHHHTTSCCSEEEESS--GGGT-----GGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEECc--cccc-----hhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCC
Confidence 568888899999985441 0100 111212 23445555554 589988744322 2455677889999
Q ss_pred eee-ecCCC-----ChhHHHHHHHh
Q 037779 117 YVD-ESEVL-----TPADEENHINK 135 (310)
Q Consensus 117 ~v~-~~~~~-----~~~~~~~~~~~ 135 (310)
+++ .+... +.+.+.+.++.
T Consensus 112 avlv~~P~y~~~~~s~~~l~~~f~~ 136 (307)
T 3s5o_A 112 AAMVVTPCYYRGRMSSAALIHHYTK 136 (307)
T ss_dssp EEEEECCCTTGGGCCHHHHHHHHHH
T ss_pred EEEEcCCCcCCCCCCHHHHHHHHHH
Confidence 998 33222 34455555543
No 351
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=91.20 E-value=1.6 Score=38.47 Aligned_cols=85 Identities=13% Similarity=0.262 Sum_probs=60.5
Q ss_pred cHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHcCC--------Chhh
Q 037779 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTNYS--------DPDV 280 (310)
Q Consensus 209 ~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~~~--------~~~~ 280 (310)
+.+.+..+++..++||+. =...+ ++-++.++..+|||+|++--+... + ..+++|.+..+... +..-
T Consensus 89 s~~dL~~ir~~v~lPvLr-KDfi~-~~~qi~ea~~~GAD~ilLi~a~l~---~-~~l~~l~~~a~~lGl~~lvEv~~~eE 162 (251)
T 1i4n_A 89 DPAFVRAARNLTCRPILA-KDFYI-DTVQVKLASSVGADAILIIARILT---A-EQIKEIYEAAEELGMDSLVEVHSRED 162 (251)
T ss_dssp CTHHHHHHHTTCCSCEEE-ECCCC-STHHHHHHHHTTCSEEEEEGGGSC---H-HHHHHHHHHHHTTTCEEEEEECSHHH
T ss_pred CHHHHHHHHHhCCCCEEE-eeCCC-CHHHHHHHHHcCCCEEEEecccCC---H-HHHHHHHHHHHHcCCeEEEEeCCHHH
Confidence 456677888878899974 46666 567899999999999998877654 2 56777777766642 2222
Q ss_pred HHhhhhcc-CCceeccccccc
Q 037779 281 LAEVSCGL-GEAMVGIDLNDV 300 (310)
Q Consensus 281 ~~~~~~~~-~~~~~~~~~~~~ 300 (310)
.+.+..+ |.++.|+...|.
T Consensus 163 -~~~A~~l~g~~iIGinnr~l 182 (251)
T 1i4n_A 163 -LEKVFSVIRPKIIGINTRDL 182 (251)
T ss_dssp -HHHHHTTCCCSEEEEECBCT
T ss_pred -HHHHHhcCCCCEEEEeCccc
Confidence 3445566 999999987654
No 352
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=91.12 E-value=2.7 Score=38.14 Aligned_cols=118 Identities=17% Similarity=0.161 Sum_probs=62.7
Q ss_pred HHHHHHHHcCCcEEEeccc--ccchhhhcCCCCCCCChHHHHHHHhhc--CcceEeeccccc---------hHHHHHHHH
Q 037779 46 EQARIAEEAGACAVMALER--VPADIRAQGGVARMSDPQLIKQIKSSV--TIPVMAKARIGH---------FVEAQILEA 112 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~--~~~d~r~~~G~~~~~~~~~i~~i~~~~--~lPv~~kd~i~~---------~~~~~~~~~ 112 (310)
+.++.+.++|+.++ .++. .|+-.-+.+|..+.+..+.+.+|++.+ +.++.+..+.+. .+.++.+.+
T Consensus 108 ~~v~~l~~aGaagv-~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A~~~~~I~ARtda~~~~g~~~ai~Ra~ay~e 186 (305)
T 3ih1_A 108 RTAVEMVEAKVAAV-QIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEVAPSLYIVARTDARGVEGLDEAIERANAYVK 186 (305)
T ss_dssp HHHHHHHHTTCSEE-EEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHHCTTSEEEEEECCHHHHCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCcEE-EECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHcCCCeEEEEeeccccccCHHHHHHHHHHHHH
Confidence 66899999999998 4641 111000111222222233444554432 566666544431 246678888
Q ss_pred cCCCeeeecCCCChhHHHHHHHhcCCCCcEEeec----CCH-HHHHHHHHhCCCEEEEe
Q 037779 113 IGVDYVDESEVLTPADEENHINKHNFRVPFVCGC----RNL-GESLRRIREGAAMIRTK 166 (310)
Q Consensus 113 aGad~v~~~~~~~~~~~~~~~~~~~~~l~v~~~v----~t~-~ea~~a~~~Gad~I~v~ 166 (310)
+|||.|......++.++.+.... ..+++++.. .++ -......++|...|...
T Consensus 187 AGAD~i~~e~~~~~~~~~~i~~~--~~~P~~~n~~~~g~tp~~~~~eL~~lGv~~v~~~ 243 (305)
T 3ih1_A 187 AGADAIFPEALQSEEEFRLFNSK--VNAPLLANMTEFGKTPYYSAEEFANMGFQMVIYP 243 (305)
T ss_dssp HTCSEEEETTCCSHHHHHHHHHH--SCSCBEEECCTTSSSCCCCHHHHHHTTCSEEEEC
T ss_pred cCCCEEEEcCCCCHHHHHHHHHH--cCCCEEEeecCCCCCCCCCHHHHHHcCCCEEEEc
Confidence 99999986544344555444444 234554322 111 12344556799888764
No 353
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=91.09 E-value=1.6 Score=39.50 Aligned_cols=62 Identities=16% Similarity=0.222 Sum_probs=39.1
Q ss_pred HHHHHHhc--CCCCEEEEccCCCCCHHHHH---HHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHc
Q 037779 212 LVMQTKQL--GRLPVVHFAAGGVATPADAA---MMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTN 274 (310)
Q Consensus 212 l~~~i~~~--~~iPVv~ia~GGI~t~~di~---~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~ 274 (310)
+++.+.+. .++||+ +-.|+.++.+.+. .+.++|||++++..-.|..++.....+-|....++
T Consensus 70 v~~~~~~~~~grvpVi-aGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a 136 (301)
T 1xky_A 70 LYRHVVSVVDKRVPVI-AGTGSNNTHASIDLTKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAES 136 (301)
T ss_dssp HHHHHHHHHTTSSCEE-EECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCceEE-eCCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHh
Confidence 44444432 478996 3445554444333 34467999999999999888776666555555444
No 354
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=91.07 E-value=3.6 Score=37.14 Aligned_cols=84 Identities=18% Similarity=0.177 Sum_probs=47.8
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCC-------hHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCe
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVARMSD-------PQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDY 117 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~-------~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~ 117 (310)
.+.|+.+.+.||+.| +++-.+|.+ |+..... ...++.+++. ++|+++..+ +.+-++.+.++|++.
T Consensus 55 ~~~a~~~v~~GAdII-DIGgeSTrP----ga~~v~~~eE~~Rv~pvI~~l~~~-~vpiSIDT~--~~~Va~aAl~aGa~i 126 (294)
T 2dqw_A 55 LERAREMVAEGADIL-DLGAESTRP----GAAPVPVEEEKRRLLPVLEAVLSL-GVPVSVDTR--KPEVAEEALKLGAHL 126 (294)
T ss_dssp HHHHHHHHHHTCSEE-EEECC---------------CCHHHHHHHHHHHHHTT-CSCEEEECS--CHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHCCCCEE-EECCCcCCC----CCCCCCHHHHHHHHHHHHHHHHhC-CCeEEEECC--CHHHHHHHHHhCCCE
Confidence 478999999999998 665222211 1100001 2233444444 889987644 335677888899998
Q ss_pred ee-ecCCCChhHHHHHHHhcC
Q 037779 118 VD-ESEVLTPADEENHINKHN 137 (310)
Q Consensus 118 v~-~~~~~~~~~~~~~~~~~~ 137 (310)
|- ++.. ..++....+.+++
T Consensus 127 INdVsg~-~d~~m~~v~a~~~ 146 (294)
T 2dqw_A 127 LNDVTGL-RDERMVALAARHG 146 (294)
T ss_dssp EECSSCS-CCHHHHHHHHHHT
T ss_pred EEECCCC-CChHHHHHHHHhC
Confidence 86 3333 4455666555543
No 355
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=91.02 E-value=0.89 Score=41.82 Aligned_cols=78 Identities=19% Similarity=0.146 Sum_probs=52.6
Q ss_pred CCHHHHHHHHHcCCcEEEecc--cc---cchh-hhc-----CCCCCCCChHHHHHHHhhc-CcceEeeccccchHHHHHH
Q 037779 43 VTPEQARIAEEAGACAVMALE--RV---PADI-RAQ-----GGVARMSDPQLIKQIKSSV-TIPVMAKARIGHFVEAQIL 110 (310)
Q Consensus 43 ~~~~~a~~~~~~Ga~~I~~l~--~~---~~d~-r~~-----~G~~~~~~~~~i~~i~~~~-~lPv~~kd~i~~~~~~~~~ 110 (310)
.+++.++.+.++|+++|...| .. +.+. +.. ....-.+..+.++++++.+ ++||+....+.+.+++..+
T Consensus 190 ~~~~~a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~~~d~~k~ 269 (349)
T 1p0k_A 190 MSKASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEFPASTMIASGGLQDALDVAKA 269 (349)
T ss_dssp CCHHHHHHHHHHTCSEEEEEC---------------CCGGGGTTCSCCHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHH
T ss_pred CCHHHHHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhcCCCeEEEECCCCCHHHHHHH
Confidence 358999999999999985543 10 0000 110 0011134567788888876 8999999888877788888
Q ss_pred HHcCCCeeee
Q 037779 111 EAIGVDYVDE 120 (310)
Q Consensus 111 ~~aGad~v~~ 120 (310)
.++|||.|.+
T Consensus 270 l~~GAd~V~i 279 (349)
T 1p0k_A 270 IALGASCTGM 279 (349)
T ss_dssp HHTTCSEEEE
T ss_pred HHcCCCEEEE
Confidence 8899999973
No 356
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=90.92 E-value=1.8 Score=39.07 Aligned_cols=118 Identities=15% Similarity=0.121 Sum_probs=64.5
Q ss_pred HHHHHHHHcCCcEEEeccc--ccchhhhcCCCCCCCChHHHHHHHhhc----CcceEeeccccc---------hHHHHHH
Q 037779 46 EQARIAEEAGACAVMALER--VPADIRAQGGVARMSDPQLIKQIKSSV----TIPVMAKARIGH---------FVEAQIL 110 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~--~~~d~r~~~G~~~~~~~~~i~~i~~~~----~lPv~~kd~i~~---------~~~~~~~ 110 (310)
+.++.++++|+.+| .++. .|+-..+.+|..+.+..+.+.+|+..+ +.++.++.+.+. .+.++.+
T Consensus 98 ~~v~~l~~aGa~gv-~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~gl~~ai~ra~ay 176 (295)
T 1xg4_A 98 RTVKSMIKAGAAGL-HIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAIERAQAY 176 (295)
T ss_dssp HHHHHHHHHTCSEE-EEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEE-EECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhhhcCHHHHHHHHHHH
Confidence 67899999999999 5641 111111222343444445555555443 345555544431 2456788
Q ss_pred HHcCCCeeeecCCCChhHHHHHHHhcCCCCcEEeecC----CH-HHHHHHHHhCCCEEEEe
Q 037779 111 EAIGVDYVDESEVLTPADEENHINKHNFRVPFVCGCR----NL-GESLRRIREGAAMIRTK 166 (310)
Q Consensus 111 ~~aGad~v~~~~~~~~~~~~~~~~~~~~~l~v~~~v~----t~-~ea~~a~~~Gad~I~v~ 166 (310)
.++|||.|......+.+++.+..... .+|+++... ++ -......++|.+.+.+.
T Consensus 177 ~eAGAd~i~~e~~~~~~~~~~i~~~~--~iP~~~N~~~~g~~p~~~~~eL~~~G~~~v~~~ 235 (295)
T 1xg4_A 177 VEAGAEMLFPEAITELAMYRQFADAV--QVPILANITEFGATPLFTTDELRSAHVAMALYP 235 (295)
T ss_dssp HHTTCSEEEETTCCSHHHHHHHHHHH--CSCBEEECCSSSSSCCCCHHHHHHTTCSEEEES
T ss_pred HHcCCCEEEEeCCCCHHHHHHHHHHc--CCCEEEEecccCCCCCCCHHHHHHcCCCEEEEC
Confidence 88999999855442234444433332 355543221 11 12344556799988764
No 357
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=90.78 E-value=0.53 Score=43.06 Aligned_cols=92 Identities=15% Similarity=0.216 Sum_probs=57.3
Q ss_pred ccceeeecCCccccCCCHHHHHHHHHcCCcEEEeccccc--chh------hhcC---CCC-CCCChHHHHHHHhhc--Cc
Q 037779 28 VGLAQMLRGGVIMDVVTPEQARIAEEAGACAVMALERVP--ADI------RAQG---GVA-RMSDPQLIKQIKSSV--TI 93 (310)
Q Consensus 28 ~~~~~~l~~g~i~~~~~~~~a~~~~~~Ga~~I~~l~~~~--~d~------r~~~---G~~-~~~~~~~i~~i~~~~--~l 93 (310)
.|+..+++.+. ......++++.++++|+++|..-|... .+. ..++ |.. .....+.++++++.+ ++
T Consensus 212 ~Pv~vKi~~~~-~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~i 290 (336)
T 1f76_A 212 VPIAVKIAPDL-SEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRL 290 (336)
T ss_dssp CCEEEECCSCC-CHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSS
T ss_pred CceEEEecCCC-CHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCC
Confidence 45566655431 100114679999999999996544110 000 0111 100 001236788888888 89
Q ss_pred ceEeeccccchHHHHHHHHcCCCeeee
Q 037779 94 PVMAKARIGHFVEAQILEAIGVDYVDE 120 (310)
Q Consensus 94 Pv~~kd~i~~~~~~~~~~~aGad~v~~ 120 (310)
||+....+.+.+++..+.++|||.|-+
T Consensus 291 pVi~~GGI~~~~da~~~l~~GAd~V~i 317 (336)
T 1f76_A 291 PIIGVGGIDSVIAAREKIAAGASLVQI 317 (336)
T ss_dssp CEEEESSCCSHHHHHHHHHHTCSEEEE
T ss_pred CEEEECCCCCHHHHHHHHHCCCCEEEe
Confidence 999999998778888888899999973
No 358
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=90.57 E-value=9.1 Score=34.20 Aligned_cols=82 Identities=7% Similarity=0.049 Sum_probs=46.2
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCCh---HHHHHHHhhc--CcceEeeccccc----hHHHHHHHHcCCC
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDP---QLIKQIKSSV--TIPVMAKARIGH----FVEAQILEAIGVD 116 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~---~~i~~i~~~~--~lPv~~kd~i~~----~~~~~~~~~aGad 116 (310)
+.++.+.+.|++++..+. ..+-+..+... +.++.+.+.+ ++||++...-.. .+.++.+.++|||
T Consensus 28 ~lv~~li~~Gv~gl~~~G-------ttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gad 100 (294)
T 3b4u_A 28 AHARRCLSNGCDSVTLFG-------TTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGAR 100 (294)
T ss_dssp HHHHHHHHTTCSEEEESS-------TTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEECc-------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCC
Confidence 678889999999985441 00001112222 2344455544 489988754432 2455677789999
Q ss_pred eee-ecCC----CChhHHHHHHH
Q 037779 117 YVD-ESEV----LTPADEENHIN 134 (310)
Q Consensus 117 ~v~-~~~~----~~~~~~~~~~~ 134 (310)
+++ .+.. .+...+.+.++
T Consensus 101 avlv~~P~y~~~~s~~~l~~~f~ 123 (294)
T 3b4u_A 101 NILLAPPSYFKNVSDDGLFAWFS 123 (294)
T ss_dssp EEEECCCCSSCSCCHHHHHHHHH
T ss_pred EEEEcCCcCCCCCCHHHHHHHHH
Confidence 998 3322 23345555444
No 359
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=90.55 E-value=0.76 Score=42.90 Aligned_cols=74 Identities=19% Similarity=0.204 Sum_probs=53.6
Q ss_pred CCCHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhc--CcceEeeccccchHHHHHHHHcCCCeee
Q 037779 42 VVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSV--TIPVMAKARIGHFVEAQILEAIGVDYVD 119 (310)
Q Consensus 42 ~~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~--~lPv~~kd~i~~~~~~~~~~~aGad~v~ 119 (310)
+.+++.++.+.++|+++|.+-|. ..+... .-....+.+.++++.+ ++||+....+.+..++..+.++|||.|.
T Consensus 237 v~~~e~a~~a~~~Gad~I~vs~~---ggr~~~--~g~~~~~~l~~v~~~v~~~ipVia~GGI~~g~D~~kalalGAd~V~ 311 (368)
T 2nli_A 237 IQHPEDADMAIKRGASGIWVSNH---GARQLY--EAPGSFDTLPAIAERVNKRVPIVFDSGVRRGEHVAKALASGADVVA 311 (368)
T ss_dssp ECSHHHHHHHHHTTCSEEEECCG---GGTSCS--SCCCHHHHHHHHHHHHTTSSCEEECSSCCSHHHHHHHHHTTCSEEE
T ss_pred CCCHHHHHHHHHcCCCEEEEcCC---CcCCCC--CCCChHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEE
Confidence 35689999999999999954320 011111 1134467888888877 6999999888776777777889999997
Q ss_pred e
Q 037779 120 E 120 (310)
Q Consensus 120 ~ 120 (310)
+
T Consensus 312 i 312 (368)
T 2nli_A 312 L 312 (368)
T ss_dssp E
T ss_pred E
Confidence 4
No 360
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=90.55 E-value=1.1 Score=39.36 Aligned_cols=115 Identities=19% Similarity=0.133 Sum_probs=60.7
Q ss_pred HHHHHHHHHcCCcEEE-ecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeecc---------cc-c-hHHH-HHHH
Q 037779 45 PEQARIAEEAGACAVM-ALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKAR---------IG-H-FVEA-QILE 111 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~-~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~---------i~-~-~~~~-~~~~ 111 (310)
.+.++.+.++|++.|. ++|....+...+ ......+.+.++..++|+++... .. + ..++ +.+.
T Consensus 102 ~~~v~~a~~~Ga~~v~~~l~~~~~~~~~~-----~~~~~~v~~~~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~ 176 (273)
T 2qjg_A 102 VTTVEEAIRMGADAVSIHVNVGSDEDWEA-----YRDLGMIAETCEYWGMPLIAMMYPRGKHIQNERDPELVAHAARLGA 176 (273)
T ss_dssp CSCHHHHHHTTCSEEEEEEEETSTTHHHH-----HHHHHHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEEecCCCCHHHH-----HHHHHHHHHHHHHcCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHH
Confidence 4678889999999982 122000000000 00122333344446888887431 11 1 1233 6677
Q ss_pred HcCCCeeeecCCCChhHHHHHHHhcCCCCcEEe--ecC--CHHH----HHHHHHhCCCEEEEe
Q 037779 112 AIGVDYVDESEVLTPADEENHINKHNFRVPFVC--GCR--NLGE----SLRRIREGAAMIRTK 166 (310)
Q Consensus 112 ~aGad~v~~~~~~~~~~~~~~~~~~~~~l~v~~--~v~--t~~e----a~~a~~~Gad~I~v~ 166 (310)
++|+|+|..+....+. ..+.+.+. .++++++ +++ +.++ +..+.+.|++.+.+.
T Consensus 177 ~~Gad~i~~~~~~~~~-~l~~i~~~-~~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~vg 237 (273)
T 2qjg_A 177 ELGADIVKTSYTGDID-SFRDVVKG-CPAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAVG 237 (273)
T ss_dssp HTTCSEEEECCCSSHH-HHHHHHHH-CSSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEECC
T ss_pred HcCCCEEEECCCCCHH-HHHHHHHh-CCCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEee
Confidence 8999998754323333 33444332 2455555 365 4666 555567899988764
No 361
>3qst_A Triosephosphate isomerase, putative; TIM barrel; 1.75A {Trichomonas vaginalis} PDB: 3qsr_A
Probab=90.40 E-value=2.3 Score=37.66 Aligned_cols=34 Identities=21% Similarity=0.505 Sum_probs=28.9
Q ss_pred CCCEEEEccCCCCCHHHHHHHHH-cCCCEEEEcccccc
Q 037779 221 RLPVVHFAAGGVATPADAAMMMQ-LGCDGVFVGSGVFK 257 (310)
Q Consensus 221 ~iPVv~ia~GGI~t~~di~~~~~-~GadgV~VGsai~~ 257 (310)
.++| +..|++ +++++.+++. .++||++||++-.+
T Consensus 207 ~vrI--lYGGSV-~~~N~~~l~~~~diDG~LVGgASL~ 241 (255)
T 3qst_A 207 KVRI--LYGGSV-KPNNCNELAACPDVDGFLVGGASLE 241 (255)
T ss_dssp HCEE--EECSCC-CTTTHHHHHHSTTCCEEEECGGGGS
T ss_pred cccE--EEcCCc-CHhHHHHHhcCCCCCEEEeeHHHhh
Confidence 4677 679999 5899988886 69999999999888
No 362
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=90.35 E-value=2.3 Score=38.49 Aligned_cols=118 Identities=18% Similarity=0.127 Sum_probs=64.7
Q ss_pred HHHHHHHHcCCcEEEecccccchhhh--cCCCCCCCChHHHHHHHhhc----CcceEeeccccc---------hHHHHHH
Q 037779 46 EQARIAEEAGACAVMALERVPADIRA--QGGVARMSDPQLIKQIKSSV----TIPVMAKARIGH---------FVEAQIL 110 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~--~~G~~~~~~~~~i~~i~~~~----~lPv~~kd~i~~---------~~~~~~~ 110 (310)
+.++.+.++|+.++ .++......++ ..|..+.+..+.+.+|+... +.++++..+.+. .+.++.+
T Consensus 102 ~~v~~l~~aGaagv-~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~~~gldeai~Ra~ay 180 (298)
T 3eoo_A 102 RTIRSFIKAGVGAV-HLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAAAAEGIDAAIERAIAY 180 (298)
T ss_dssp HHHHHHHHTTCSEE-EEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCeEE-EECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhhhhcCHHHHHHHHHhh
Confidence 66899999999998 46411110111 11222333344455554432 345555544431 2456778
Q ss_pred HHcCCCeeeecCCCChhHHHHHHHhcCCCCcEEeecC----CH-HHHHHHHHhCCCEEEEe
Q 037779 111 EAIGVDYVDESEVLTPADEENHINKHNFRVPFVCGCR----NL-GESLRRIREGAAMIRTK 166 (310)
Q Consensus 111 ~~aGad~v~~~~~~~~~~~~~~~~~~~~~l~v~~~v~----t~-~ea~~a~~~Gad~I~v~ 166 (310)
.++|||.|......+++++.+..+.. ..++++.+. ++ -......++|...|...
T Consensus 181 ~~AGAD~if~~~~~~~ee~~~~~~~~--~~Pl~~n~~~~g~tp~~~~~eL~~lGv~~v~~~ 239 (298)
T 3eoo_A 181 VEAGADMIFPEAMKTLDDYRRFKEAV--KVPILANLTEFGSTPLFTLDELKGANVDIALYC 239 (298)
T ss_dssp HHTTCSEEEECCCCSHHHHHHHHHHH--CSCBEEECCTTSSSCCCCHHHHHHTTCCEEEEC
T ss_pred HhcCCCEEEeCCCCCHHHHHHHHHHc--CCCeEEEeccCCCCCCCCHHHHHHcCCeEEEEc
Confidence 88999999865554566666655553 245544321 11 12334556798888764
No 363
>3krs_A Triosephosphate isomerase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, I structural genomics; 1.55A {Cryptosporidium parvum iowa II}
Probab=90.35 E-value=3.9 Score=36.45 Aligned_cols=37 Identities=27% Similarity=0.488 Sum_probs=30.5
Q ss_pred CCCEEEEccCCCCCHHHHHHHHH-cCCCEEEEccccccCCCH
Q 037779 221 RLPVVHFAAGGVATPADAAMMMQ-LGCDGVFVGSGVFKSGDP 261 (310)
Q Consensus 221 ~iPVv~ia~GGI~t~~di~~~~~-~GadgV~VGsai~~~~dp 261 (310)
.++| +..|++ +++++.+++. .++||++||++-.+ ++.
T Consensus 226 ~vrI--LYGGSV-~~~N~~el~~~~diDG~LVGgASL~-~~F 263 (271)
T 3krs_A 226 NLRI--IYGGSV-TPDNCNELIKCADIDGFLVGGASLK-PTF 263 (271)
T ss_dssp HCCE--EECSCC-CTTTHHHHHHSTTCCEEEESGGGGS-TTH
T ss_pred CccE--EEcCCc-CHHHHHHHhcCCCCCEEEeeHHhhh-HHH
Confidence 4788 569999 5899998886 69999999999998 443
No 364
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=90.32 E-value=4.4 Score=31.80 Aligned_cols=55 Identities=18% Similarity=0.188 Sum_probs=38.0
Q ss_pred cHHHHHHHHhc---CCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHH
Q 037779 209 PYDLVMQTKQL---GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQ 270 (310)
Q Consensus 209 ~~~l~~~i~~~---~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~ 270 (310)
.+++++.+++. .++||+++ .+-.+.++..+++++|+++++ .++-++.+....+.+
T Consensus 72 G~el~~~ir~~~~~~~ipvI~l--Ta~~~~~~~~~~~~~Ga~~yl-----~KP~~~~~L~~~i~~ 129 (134)
T 3to5_A 72 GIDLLKNIRADEELKHLPVLMI--TAEAKREQIIEAAQAGVNGYI-----VKPFTAATLKEKLDK 129 (134)
T ss_dssp HHHHHHHHHHSTTTTTCCEEEE--ESSCCHHHHHHHHHTTCCEEE-----ESSCCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCeEEEE--ECCCCHHHHHHHHHCCCCEEE-----ECCCCHHHHHHHHHH
Confidence 46777877653 46899755 455579999999999999874 455555554444433
No 365
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=90.25 E-value=10 Score=34.25 Aligned_cols=84 Identities=8% Similarity=0.072 Sum_probs=47.2
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCCh---HHHHHHHhhc--CcceEeeccccc----hHHHHHHHHcCC
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDP---QLIKQIKSSV--TIPVMAKARIGH----FVEAQILEAIGV 115 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~---~~i~~i~~~~--~lPv~~kd~i~~----~~~~~~~~~aGa 115 (310)
.+.++.+.+.|++++..+. .| +-+..+... +.++.+.+.+ ++||++...-.. .+.++.+.++|+
T Consensus 31 ~~lv~~li~~Gv~Gl~v~G--tT-----GE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga 103 (311)
T 3h5d_A 31 PALIEHLLAHHTDGILLAG--TT-----AESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGG 103 (311)
T ss_dssp HHHHHHHHHTTCCCEEESS--TT-----TTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHcCCCEEEECc--cc-----cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCC
Confidence 4789999999999985441 01 101112222 2344445544 589998754332 245567777897
Q ss_pred -Ceee-ecCC---CChhHHHHHHHh
Q 037779 116 -DYVD-ESEV---LTPADEENHINK 135 (310)
Q Consensus 116 -d~v~-~~~~---~~~~~~~~~~~~ 135 (310)
|+++ .+.. .+.+.+.+.++.
T Consensus 104 ~davlv~~P~y~~~s~~~l~~~f~~ 128 (311)
T 3h5d_A 104 FAAGLAIVPYYNKPSQEGMYQHFKA 128 (311)
T ss_dssp CSEEEEECCCSSCCCHHHHHHHHHH
T ss_pred CcEEEEcCCCCCCCCHHHHHHHHHH
Confidence 9987 3322 234555555544
No 366
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=90.25 E-value=3.4 Score=38.24 Aligned_cols=161 Identities=15% Similarity=0.164 Sum_probs=88.3
Q ss_pred cceEeecccc--------chHHHHHHHHcCCCeeeecCC-CChhHHHHHHHhcCCCCcEEeec-CCHHHHHHHHHhCCCE
Q 037779 93 IPVMAKARIG--------HFVEAQILEAIGVDYVDESEV-LTPADEENHINKHNFRVPFVCGC-RNLGESLRRIREGAAM 162 (310)
Q Consensus 93 lPv~~kd~i~--------~~~~~~~~~~aGad~v~~~~~-~~~~~~~~~~~~~~~~l~v~~~v-~t~~ea~~a~~~Gad~ 162 (310)
-|+.++.... +..++..+.++|+|.|-.+-. ....+.+..+++. ..+|+++++ -+...+..+++.|+|.
T Consensus 30 ~Pi~VQSMtnt~T~D~~atv~Qi~~l~~aG~diVRvavp~~~~a~al~~I~~~-~~vPlvaDiHf~~~lal~a~e~G~dk 108 (366)
T 3noy_A 30 APIVVQSMTSTKTHDVEATLNQIKRLYEAGCEIVRVAVPHKEDVEALEEIVKK-SPMPVIADIHFAPSYAFLSMEKGVHG 108 (366)
T ss_dssp SCCEEEEECCSCTTCHHHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHH-CSSCEEEECCSCHHHHHHHHHTTCSE
T ss_pred CcEEEEEecCCCCcCHHHHHHHHHHHHHcCCCEEEeCCCChHHHHHHHHHHhc-CCCCEEEeCCCCHHHHHHHHHhCCCe
Confidence 4666665443 235778888999999974321 1223444455443 569999997 5888999999999999
Q ss_pred EEEe-cCCCC-CchHHHHHHHHHhhcceec---ccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCC-HH
Q 037779 163 IRTK-GEAGT-GNIVEAVRHVRSVMGDIRV---LRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVAT-PA 236 (310)
Q Consensus 163 I~v~-g~~~~-~~~~~~~~~~~~~~~~~~~---l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t-~~ 236 (310)
+.+| |-.+. ..+.+.++.+++...-+|. ...++ .+++...-. ..| ++=+.| .+
T Consensus 109 lRINPGNig~~~~~~~vv~~ak~~~~piRIGvN~GSL~--------------~~ll~~yg~--~~~-----eamVeSAl~ 167 (366)
T 3noy_A 109 IRINPGNIGKEEIVREIVEEAKRRGVAVRIGVNSGSLE--------------KDLLEKYGY--PSA-----EALAESALR 167 (366)
T ss_dssp EEECHHHHSCHHHHHHHHHHHHHHTCEEEEEEEGGGCC--------------HHHHHHHSS--CCH-----HHHHHHHHH
T ss_pred EEECCcccCchhHHHHHHHHHHHcCCCEEEecCCcCCC--------------HHHHHhcCC--CCH-----HHHHHHHHH
Confidence 9998 22111 1123444444444333331 11111 111111100 000 000111 23
Q ss_pred HHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHcCCCh
Q 037779 237 DAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTNYSDP 278 (310)
Q Consensus 237 di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~~~~~ 278 (310)
.++.+-+.|++-+++. +++.|+..+++.++..-+...-|
T Consensus 168 ~~~~~e~~gf~~iviS---~K~S~v~~~i~ayr~la~~~dyP 206 (366)
T 3noy_A 168 WSEKFEKWGFTNYKVS---IKGSDVLQNVRANLIFAERTDVP 206 (366)
T ss_dssp HHHHHHHTTCCCEEEE---EECSSHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHhCCCCeEEEe---eecCChHHHHHHHHHHHhccCCC
Confidence 4455556788777743 45567888888877776665444
No 367
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=90.10 E-value=1.7 Score=39.54 Aligned_cols=54 Identities=15% Similarity=0.234 Sum_probs=35.6
Q ss_pred CCCCEEEEccCCCCCHHHH---HHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHc
Q 037779 220 GRLPVVHFAAGGVATPADA---AMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTN 274 (310)
Q Consensus 220 ~~iPVv~ia~GGI~t~~di---~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~ 274 (310)
.++||++ -.|+.++.+.+ +.+.++|||++++..-.|..++.....+-|....++
T Consensus 91 grvpVia-Gvg~~st~eai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a 147 (314)
T 3qze_A 91 GRIPVIA-GTGANSTREAVALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEA 147 (314)
T ss_dssp TSSCEEE-ECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHH
T ss_pred CCCcEEE-eCCCcCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHh
Confidence 4789963 44554443333 334468999999999999888776665555555444
No 368
>3gdm_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, K93R mutant, lyase, phosphoprotein; 1.60A {Saccharomyces cerevisiae} SCOP: c.1.2.3 PDB: 3gdl_A* 3gdk_A* 3gdt_A* 3gdr_A* 1dqw_A 1dqx_A*
Probab=90.08 E-value=0.34 Score=43.35 Aligned_cols=39 Identities=23% Similarity=0.361 Sum_probs=32.8
Q ss_pred HHHHHHHcCCCEEEEcccccc-CCCHHHHHHHHHHH-HHcC
Q 037779 237 DAAMMMQLGCDGVFVGSGVFK-SGDPVRRARAIVQA-VTNY 275 (310)
Q Consensus 237 di~~~~~~GadgV~VGsai~~-~~dp~~~~~~~~~~-~~~~ 275 (310)
+-.++++.|+|-++||+.|++ ++||.+.++++++. +++|
T Consensus 219 TP~~Ai~~GaD~iVVGRpI~~~a~dP~~aa~~i~~~~w~ay 259 (267)
T 3gdm_A 219 TVDDVVSTGSDIIIVGRGLFAKGRDAKVEGERYRKAGWEAY 259 (267)
T ss_dssp EHHHHHHTTCSEEEECGGGTSTTCCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHcCCCEEEEChhhccCCCCHHHHHHHHHHHHHHHH
Confidence 355677999999999999999 99999999998765 5544
No 369
>3g3d_A UMP synthase, uridine 5'-monophosphate synthase; C-terminal domain, orotidine 5'-monophosphate decarboxylase, human, 5-fluoro-6-azido-UMP; HET: 5FU; 1.70A {Homo sapiens} PDB: 3bvj_A* 3mw7_A* 4hib_A* 4hkp_A* 2p1f_A 2eaw_A 3bgg_A* 3bgj_A*
Probab=90.03 E-value=0.21 Score=45.66 Aligned_cols=38 Identities=24% Similarity=0.424 Sum_probs=32.5
Q ss_pred HHHHH-HcCCCEEEEccccccCCCHHHHHHHHHHH-HHcC
Q 037779 238 AAMMM-QLGCDGVFVGSGVFKSGDPVRRARAIVQA-VTNY 275 (310)
Q Consensus 238 i~~~~-~~GadgV~VGsai~~~~dp~~~~~~~~~~-~~~~ 275 (310)
-.+++ +.|+|-++||+.|++++||.+.++++++. |++|
T Consensus 267 P~~Ai~~~GaD~iVVGRpIt~A~dP~~aa~~i~~~~w~ay 306 (312)
T 3g3d_A 267 PQEVIGKRGSDIIIVGRGIISAADRLEAAEMYRKAAWEAY 306 (312)
T ss_dssp HHHHHHTTCCSEEEESHHHHTSSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCEEEEChhhcCCCCHHHHHHHHHHHHHHHH
Confidence 56777 89999999999999999999999998765 5544
No 370
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=90.03 E-value=2.1 Score=38.53 Aligned_cols=63 Identities=11% Similarity=0.102 Sum_probs=38.8
Q ss_pred HHHHHHHhc--CCCCEEEEccCCCCCHHHH---HHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHc
Q 037779 211 DLVMQTKQL--GRLPVVHFAAGGVATPADA---AMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTN 274 (310)
Q Consensus 211 ~l~~~i~~~--~~iPVv~ia~GGI~t~~di---~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~ 274 (310)
++++.+.+. .++||++ -.|+.++.+.+ +.+.++|||++++..-.|..++.....+-|....++
T Consensus 64 ~v~~~~~~~~~grvpvia-Gvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a 131 (297)
T 3flu_A 64 AVIEAVVKHVAKRVPVIA-GTGANNTVEAIALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEA 131 (297)
T ss_dssp HHHHHHHHHHTTSSCEEE-ECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCcEEE-eCCCcCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh
Confidence 344444432 4789963 34555443333 344468999999999998877776655555554444
No 371
>3th6_A Triosephosphate isomerase; alpha/beta barrel, embryogenesis, glycolysis; 2.40A {Rhipicephalus microplus}
Probab=89.90 E-value=2.3 Score=37.51 Aligned_cols=35 Identities=20% Similarity=0.390 Sum_probs=29.2
Q ss_pred CCCEEEEccCCCCCHHHHHHHHH-cCCCEEEEccccccC
Q 037779 221 RLPVVHFAAGGVATPADAAMMMQ-LGCDGVFVGSGVFKS 258 (310)
Q Consensus 221 ~iPVv~ia~GGI~t~~di~~~~~-~GadgV~VGsai~~~ 258 (310)
.++| +..|++ +++++.+++. .++||++||++-.++
T Consensus 203 ~vrI--lYGGSV-~~~N~~~l~~~~diDG~LVGgASL~~ 238 (249)
T 3th6_A 203 KVRI--QYGGSV-NAGNCKELGRKPDIDGFLVGGASLKP 238 (249)
T ss_dssp HCCE--EECSCC-CTTTHHHHHTSTTCCEEEECGGGGST
T ss_pred cccE--EEcCcc-CHhHHHHHhcCCCCCEEEeehHhhhH
Confidence 3788 579999 5899888885 699999999998874
No 372
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=89.86 E-value=11 Score=34.18 Aligned_cols=85 Identities=14% Similarity=0.108 Sum_probs=49.5
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCC----CCCC-------hHHHHHHHhhcCcceEeeccccchHHHHHHHHcC
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVA----RMSD-------PQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIG 114 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~----~~~~-------~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aG 114 (310)
+.|+.+.+.||+.| +++..+|-+ |+. .... ...++.+++.+++|+++-.+ ..+.++.+.++|
T Consensus 53 ~~A~~~v~~GAdII-DIGgeSTrP----ga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~vpISIDT~--~~~Va~aAl~aG 125 (314)
T 3tr9_A 53 RTAEKMVDEGADIL-DIGGEATNP----FVDIKTDSPSTQIELDRLLPVIDAIKKRFPQLISVDTS--RPRVMREAVNTG 125 (314)
T ss_dssp HHHHHHHHTTCSEE-EEECCCSCT----TC-----CHHHHHHHHHHHHHHHHHHHHCCSEEEEECS--CHHHHHHHHHHT
T ss_pred HHHHHHHHCCCCEE-EECCCCCCC----CcccccCCCCHHHHHHHHHHHHHHHHhhCCCeEEEeCC--CHHHHHHHHHcC
Confidence 66999999999988 664211111 110 0000 12345556667889987755 335677888899
Q ss_pred CCeeeecCCCChhHHHHHHHhcC
Q 037779 115 VDYVDESEVLTPADEENHINKHN 137 (310)
Q Consensus 115 ad~v~~~~~~~~~~~~~~~~~~~ 137 (310)
++.|-.......++....+.+.+
T Consensus 126 a~iINDVsg~~~~~m~~v~a~~g 148 (314)
T 3tr9_A 126 ADMINDQRALQLDDALTTVSALK 148 (314)
T ss_dssp CCEEEETTTTCSTTHHHHHHHHT
T ss_pred CCEEEECCCCCchHHHHHHHHhC
Confidence 99987322323345555555544
No 373
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=89.82 E-value=10 Score=33.75 Aligned_cols=82 Identities=9% Similarity=0.077 Sum_probs=45.8
Q ss_pred HHHHHHHH-cCCcEEEecccccchhhhcCCCCCCCCh---HHHHHHHhhc--CcceEeeccccc----hHHHHHHHHcCC
Q 037779 46 EQARIAEE-AGACAVMALERVPADIRAQGGVARMSDP---QLIKQIKSSV--TIPVMAKARIGH----FVEAQILEAIGV 115 (310)
Q Consensus 46 ~~a~~~~~-~Ga~~I~~l~~~~~d~r~~~G~~~~~~~---~~i~~i~~~~--~lPv~~kd~i~~----~~~~~~~~~aGa 115 (310)
+.++.+.+ .|++++..+. .|.+ +..+... +.++.+.+.+ ++||++...-.. .+.++.+.++||
T Consensus 28 ~lv~~li~~~Gv~gl~~~G--ttGE-----~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Ga 100 (293)
T 1f6k_A 28 QIIRHNIDKMKVDGLYVGG--STGE-----NFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGY 100 (293)
T ss_dssp HHHHHHHHTSCCSEEEESS--GGGT-----GGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhhCCCcEEEeCc--cccc-----hhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCC
Confidence 67888899 9999985441 0100 1112222 2344444443 589988754432 245567778999
Q ss_pred Ceee-ecCC---CChhHHHHHHH
Q 037779 116 DYVD-ESEV---LTPADEENHIN 134 (310)
Q Consensus 116 d~v~-~~~~---~~~~~~~~~~~ 134 (310)
|+++ .+.. .+.+.+.+.++
T Consensus 101 davlv~~P~y~~~~~~~l~~~f~ 123 (293)
T 1f6k_A 101 DCLSAVTPFYYKFSFPEIKHYYD 123 (293)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCCHHHHHHHHH
Confidence 9987 3322 23444554443
No 374
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=89.82 E-value=1.7 Score=38.89 Aligned_cols=63 Identities=14% Similarity=0.242 Sum_probs=39.0
Q ss_pred HHHHHHHhc--CCCCEEEEccCCCCCHHHH---HHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHc
Q 037779 211 DLVMQTKQL--GRLPVVHFAAGGVATPADA---AMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTN 274 (310)
Q Consensus 211 ~l~~~i~~~--~~iPVv~ia~GGI~t~~di---~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~ 274 (310)
++++.+.+. .++||+ +-.|+.++.+.+ +.+.++|||++++..-.|..++.....+-|....++
T Consensus 57 ~v~~~~~~~~~gr~pvi-aGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a 124 (289)
T 2yxg_A 57 KVIEKVVDVVNGRVQVI-AGAGSNCTEEAIELSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAES 124 (289)
T ss_dssp HHHHHHHHHHTTSSEEE-EECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCcEE-EeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh
Confidence 344444432 468996 345555444433 334457999999999999877776665555554444
No 375
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=89.73 E-value=2 Score=38.88 Aligned_cols=62 Identities=13% Similarity=0.159 Sum_probs=38.4
Q ss_pred HHHHHHhc--CCCCEEEEccCCCCCHHHH---HHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHc
Q 037779 212 LVMQTKQL--GRLPVVHFAAGGVATPADA---AMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTN 274 (310)
Q Consensus 212 l~~~i~~~--~~iPVv~ia~GGI~t~~di---~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~ 274 (310)
+++.+.+. .++||+ +-.|+.++.+.+ +.+.++|||++++..-.|..++.....+-|....++
T Consensus 74 v~~~~~~~~~grvpvi-aGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a 140 (304)
T 3cpr_A 74 LLKAVREEVGDRAKLI-AGVGTNNTRTSVELAEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAA 140 (304)
T ss_dssp HHHHHHHHHTTTSEEE-EECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCcEE-ecCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh
Confidence 44444432 468986 344555444433 334457999999999999877766655555554444
No 376
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=89.67 E-value=0.58 Score=44.87 Aligned_cols=91 Identities=16% Similarity=0.163 Sum_probs=59.4
Q ss_pred cc-ceeeecCCccccCCCHHHHHHHHHcCCcEEEecccccc--hhh----hcCC---CC-CCCChHHHHHHHhhc--Ccc
Q 037779 28 VG-LAQMLRGGVIMDVVTPEQARIAEEAGACAVMALERVPA--DIR----AQGG---VA-RMSDPQLIKQIKSSV--TIP 94 (310)
Q Consensus 28 ~~-~~~~l~~g~i~~~~~~~~a~~~~~~Ga~~I~~l~~~~~--d~r----~~~G---~~-~~~~~~~i~~i~~~~--~lP 94 (310)
.| +..+++.+. ....-.++|+.++++|+++|+..|.... +.. ..+| .. .....+.++++++.+ ++|
T Consensus 297 ~P~V~vKispd~-~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iP 375 (443)
T 1tv5_A 297 KPLVFVKLAPDL-NQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP 375 (443)
T ss_dssp CCEEEEEECSCC-CHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSC
T ss_pred CCeEEEEeCCCC-CHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCc
Confidence 46 677776542 1001146799999999999966652110 110 0111 00 001246788999988 899
Q ss_pred eEeeccccchHHHHHHHHcCCCeee
Q 037779 95 VMAKARIGHFVEAQILEAIGVDYVD 119 (310)
Q Consensus 95 v~~kd~i~~~~~~~~~~~aGad~v~ 119 (310)
|+....|.+.+++.....+|||.|-
T Consensus 376 VIg~GGI~s~~DA~e~l~aGAd~Vq 400 (443)
T 1tv5_A 376 IIASGGIFSGLDALEKIEAGASVCQ 400 (443)
T ss_dssp EEEESSCCSHHHHHHHHHTTEEEEE
T ss_pred EEEECCCCCHHHHHHHHHcCCCEEE
Confidence 9999999888888888889999996
No 377
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=89.65 E-value=2.2 Score=38.26 Aligned_cols=63 Identities=11% Similarity=0.219 Sum_probs=38.9
Q ss_pred HHHHHHHhc--CCCCEEEEccCCCCCHHHH---HHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHc
Q 037779 211 DLVMQTKQL--GRLPVVHFAAGGVATPADA---AMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTN 274 (310)
Q Consensus 211 ~l~~~i~~~--~~iPVv~ia~GGI~t~~di---~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~ 274 (310)
++++.+.+. .++||++ -.|+.++.+.+ +.+.++|+|++++....|..++.....+-|....++
T Consensus 58 ~v~~~~~~~~~gr~pvia-Gvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a 125 (291)
T 3tak_A 58 QVIKEIIRVANKRIPIIA-GTGANSTREAIELTKAAKDLGADAALLVTPYYNKPTQEGLYQHYKAIAEA 125 (291)
T ss_dssp HHHHHHHHHHTTSSCEEE-ECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCeEEE-eCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHh
Confidence 344444442 4789953 34444433333 334467999999999998887776665555555444
No 378
>3eww_A Ompdecase, orotidine-5'-phosphate decarboxylase; TIM barrel, unusual catalysis, disease mutati glycosyltransferase, lyase, multifunctional enzyme; HET: U1P; 1.10A {Homo sapiens} PDB: 2qcl_A* 2qcm_A* 3ewu_A* 2qcf_A* 3ex6_A* 3ex4_A* 2qcd_A* 2qcc_A 2qcg_A* 2qch_A* 2qcn_A* 2qce_A* 3ewz_A* 3ex1_A* 3ex2_A* 3ex3_A* 3ex0_A* 3ex5_A* 3l0k_A* 3l0n_A* ...
Probab=89.63 E-value=0.26 Score=43.89 Aligned_cols=39 Identities=23% Similarity=0.417 Sum_probs=33.0
Q ss_pred HHHHHH-HcCCCEEEEccccccCCCHHHHHHHHHHH-HHcC
Q 037779 237 DAAMMM-QLGCDGVFVGSGVFKSGDPVRRARAIVQA-VTNY 275 (310)
Q Consensus 237 di~~~~-~~GadgV~VGsai~~~~dp~~~~~~~~~~-~~~~ 275 (310)
+..+++ +.|+|.++||+.|++++||.+.++++++. |++|
T Consensus 214 tp~~a~~~aGad~iVvGR~I~~a~dp~~a~~~~~~~~w~ay 254 (260)
T 3eww_A 214 SPQEVIGKRGSDIIIVGRGIISAADRLEAAEMYRKAAWEAY 254 (260)
T ss_dssp CHHHHHTTSCCSEEEESHHHHTSSCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHhcCCCEEEEChhhcCCCCHHHHHHHHHHHHHHHH
Confidence 366778 89999999999999999999999998754 5544
No 379
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=89.59 E-value=11 Score=33.80 Aligned_cols=92 Identities=18% Similarity=0.195 Sum_probs=51.1
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCC---hHHHHHHHhhc--CcceEeeccccc----hHHHHHHHHcCCC
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSD---PQLIKQIKSSV--TIPVMAKARIGH----FVEAQILEAIGVD 116 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~---~~~i~~i~~~~--~lPv~~kd~i~~----~~~~~~~~~aGad 116 (310)
+.++.+.+.|++++..+- .|.+ +..+.. .+.++.+.+.+ ++||++...-.. .+.++.+.++|||
T Consensus 37 ~lv~~li~~Gv~gl~v~G--tTGE-----~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gad 109 (306)
T 1o5k_A 37 RLVRYQLENGVNALIVLG--TTGE-----SPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGAN 109 (306)
T ss_dssp HHHHHHHHTTCCEEEESS--GGGT-----GGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHcCCCEEEeCc--cccc-----hhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCC
Confidence 678888999999985441 0100 011211 22344444443 589988754432 2455677789999
Q ss_pred eee-ecCC---CChhHHHHHHHh--cCCCCcEEe
Q 037779 117 YVD-ESEV---LTPADEENHINK--HNFRVPFVC 144 (310)
Q Consensus 117 ~v~-~~~~---~~~~~~~~~~~~--~~~~l~v~~ 144 (310)
+++ .+.. .+.+.+.+.++. ...++++++
T Consensus 110 avlv~~P~y~~~s~~~l~~~f~~va~a~~lPiil 143 (306)
T 1o5k_A 110 GVLVVTPYYNKPTQEGLYQHYKYISERTDLGIVV 143 (306)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEE
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEE
Confidence 988 3322 245556665554 223455443
No 380
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=89.58 E-value=1.8 Score=38.86 Aligned_cols=63 Identities=19% Similarity=0.259 Sum_probs=39.0
Q ss_pred HHHHHHHhc--CCCCEEEEccCCCCCHHHH---HHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHc
Q 037779 211 DLVMQTKQL--GRLPVVHFAAGGVATPADA---AMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTN 274 (310)
Q Consensus 211 ~l~~~i~~~--~~iPVv~ia~GGI~t~~di---~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~ 274 (310)
++++.+.+. .++||+ +-.|+.++.+.+ +.+.++|||++++..-.|..++.....+-|....++
T Consensus 57 ~v~~~~~~~~~grvpvi-aGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a 124 (294)
T 2ehh_A 57 KVIEFAVKRAAGRIKVI-AGTGGNATHEAVHLTAHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQE 124 (294)
T ss_dssp HHHHHHHHHHTTSSEEE-EECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCcEE-EecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh
Confidence 344444432 468986 345555444443 333467999999999999877776655555554443
No 381
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=89.43 E-value=0.56 Score=42.41 Aligned_cols=90 Identities=13% Similarity=0.051 Sum_probs=57.1
Q ss_pred ccceeeecCCccccCCC-HHHHHHHHHcC-CcEEEeccccc----chhh----------hcC---CCCC-CCChHHHHHH
Q 037779 28 VGLAQMLRGGVIMDVVT-PEQARIAEEAG-ACAVMALERVP----ADIR----------AQG---GVAR-MSDPQLIKQI 87 (310)
Q Consensus 28 ~~~~~~l~~g~i~~~~~-~~~a~~~~~~G-a~~I~~l~~~~----~d~r----------~~~---G~~~-~~~~~~i~~i 87 (310)
.|+..+++.+. +..+ .++++.+.++| +++|...|... .|.+ .++ |... ....+.++++
T Consensus 161 ~Pv~vK~~~~~--~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v 238 (314)
T 2e6f_A 161 LPFGVKMPPYF--DIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAF 238 (314)
T ss_dssp SCEEEEECCCC--CHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHH
T ss_pred CCEEEEECCCC--CHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHH
Confidence 45666666542 1111 24589999999 99985444210 1100 111 1100 0124678889
Q ss_pred Hhhc-CcceEeeccccchHHHHHHHHcCCCeee
Q 037779 88 KSSV-TIPVMAKARIGHFVEAQILEAIGVDYVD 119 (310)
Q Consensus 88 ~~~~-~lPv~~kd~i~~~~~~~~~~~aGad~v~ 119 (310)
++.+ ++||+....+.+.+++..+..+|||.|-
T Consensus 239 ~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~ 271 (314)
T 2e6f_A 239 YRRCPDKLVFGCGGVYSGEDAFLHILAGASMVQ 271 (314)
T ss_dssp HHHCTTSEEEEESSCCSHHHHHHHHHHTCSSEE
T ss_pred HHhcCCCCEEEECCCCCHHHHHHHHHcCCCEEE
Confidence 9888 9999999999877788777789999986
No 382
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=89.41 E-value=1.7 Score=39.50 Aligned_cols=63 Identities=14% Similarity=0.131 Sum_probs=39.6
Q ss_pred HHHHHHHhc--CCCCEEEEccCCCCCHHHHH---HHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHc
Q 037779 211 DLVMQTKQL--GRLPVVHFAAGGVATPADAA---MMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTN 274 (310)
Q Consensus 211 ~l~~~i~~~--~~iPVv~ia~GGI~t~~di~---~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~ 274 (310)
++++.+.+. .++||++ -.|+-++.+.+. .+.++|||++++..-.|..++.....+-|....++
T Consensus 81 ~v~~~~v~~~~grvpVia-Gvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a 148 (315)
T 3na8_A 81 EVVDFTLKTVAHRVPTIV-SVSDLTTAKTVRRAQFAESLGAEAVMVLPISYWKLNEAEVFQHYRAVGEA 148 (315)
T ss_dssp HHHHHHHHHHTTSSCBEE-ECCCSSHHHHHHHHHHHHHTTCSEEEECCCCSSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCcEEE-ecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh
Confidence 344444442 4789953 344454433333 44468999999999999888776666555555554
No 383
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=89.31 E-value=0.26 Score=46.62 Aligned_cols=50 Identities=18% Similarity=0.060 Sum_probs=37.3
Q ss_pred HHHhcCCCCEEEEccCCCCCHHHHHHHH-HcCCCEEEEccccccCCCHHHHHH
Q 037779 215 QTKQLGRLPVVHFAAGGVATPADAAMMM-QLGCDGVFVGSGVFKSGDPVRRAR 266 (310)
Q Consensus 215 ~i~~~~~iPVv~ia~GGI~t~~di~~~~-~~GadgV~VGsai~~~~dp~~~~~ 266 (310)
.+++..++|| |+.|||.+..++.+.+ +-++|.|.+|+.++..+|...+++
T Consensus 312 ~ir~~~~~pv--i~~G~~~~~~~~~~~~~~~~aDlV~~gR~~iadPdl~~k~~ 362 (400)
T 4gbu_A 312 FVYSIWKGPV--IRAGNFALHPEVVREEVKDKRTLIGYGRFFISNPDLVDRLE 362 (400)
T ss_dssp HHHHHCCSCE--EEESSCTTCHHHHHHHTTSTTEEEECCHHHHHCTTHHHHHH
T ss_pred HHHHHhCCCE--EEeCCCCChHHHHHHHHcCCCeEhHHHHHHHHCcHHHHHHH
Confidence 3455567899 5679998766655444 568999999999999888765543
No 384
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=89.30 E-value=1.9 Score=39.03 Aligned_cols=63 Identities=22% Similarity=0.321 Sum_probs=38.9
Q ss_pred HHHHHHHhc--CCCCEEEEccCCCCCHHHH---HHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHc
Q 037779 211 DLVMQTKQL--GRLPVVHFAAGGVATPADA---AMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTN 274 (310)
Q Consensus 211 ~l~~~i~~~--~~iPVv~ia~GGI~t~~di---~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~ 274 (310)
++++.+.+. .++||+ +-.|+.++.+.+ +.+.++|||++++..-.|..++.....+-|....++
T Consensus 69 ~vi~~~~~~~~grvpVi-aGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a 136 (306)
T 1o5k_A 69 KLVSRTLEIVDGKIPVI-VGAGTNSTEKTLKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISER 136 (306)
T ss_dssp HHHHHHHHHHTTSSCEE-EECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCCeEE-EcCCCccHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh
Confidence 344444432 478996 344555444433 333457999999999999888776655555554443
No 385
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=89.28 E-value=1.9 Score=39.51 Aligned_cols=63 Identities=10% Similarity=0.145 Sum_probs=39.1
Q ss_pred HHHHHHHhc--CCCCEEEEccCCCCCHHHH---HHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHc
Q 037779 211 DLVMQTKQL--GRLPVVHFAAGGVATPADA---AMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTN 274 (310)
Q Consensus 211 ~l~~~i~~~--~~iPVv~ia~GGI~t~~di---~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~ 274 (310)
++++.+.+. .++||++ -.|+.++.+.+ +.+.++|||++++..-.|..++.....+-|....++
T Consensus 91 ~vi~~~ve~~~grvpVia-Gvg~~st~eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a 158 (332)
T 2r8w_A 91 RAIEAAATILRGRRTLMA-GIGALRTDEAVALAKDAEAAGADALLLAPVSYTPLTQEEAYHHFAAVAGA 158 (332)
T ss_dssp HHHHHHHHHHTTSSEEEE-EECCSSHHHHHHHHHHHHHHTCSEEEECCCCSSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCcEEE-ecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh
Confidence 344444432 3689963 44555444433 334457999999999999887776655555554444
No 386
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=89.25 E-value=2.1 Score=39.49 Aligned_cols=63 Identities=19% Similarity=0.247 Sum_probs=39.3
Q ss_pred HHHHHHHhc--CCCCEEEEccCCCCCHHHHH---HHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHc
Q 037779 211 DLVMQTKQL--GRLPVVHFAAGGVATPADAA---MMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTN 274 (310)
Q Consensus 211 ~l~~~i~~~--~~iPVv~ia~GGI~t~~di~---~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~ 274 (310)
++++.+.+. .++||+ +-.|+.++.+.+. .+.++|||++++..-.|..++.....+-|....++
T Consensus 88 ~vi~~~ve~~~grvpVi-aGvg~~st~eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a 155 (343)
T 2v9d_A 88 AIARFAIDHVDRRVPVL-IGTGGTNARETIELSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADS 155 (343)
T ss_dssp HHHHHHHHHHTTSSCEE-EECCSSCHHHHHHHHHHHHHHTCSEEEEECCSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCcEE-EecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh
Confidence 344444432 478996 3445554444333 33457999999999999888776666555555444
No 387
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=89.24 E-value=2.1 Score=39.00 Aligned_cols=63 Identities=17% Similarity=0.213 Sum_probs=39.0
Q ss_pred HHHHHHHhc--CCCCEEEEccCCCCCHHHH---HHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHc
Q 037779 211 DLVMQTKQL--GRLPVVHFAAGGVATPADA---AMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTN 274 (310)
Q Consensus 211 ~l~~~i~~~--~~iPVv~ia~GGI~t~~di---~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~ 274 (310)
++++.+.+. .++||++ -.|+-++.+.+ +.+.++|||++++..-.|..++.....+-|....++
T Consensus 79 ~v~~~~v~~~~grvpVia-Gvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a 146 (315)
T 3si9_A 79 RIIELCVEQVAKRVPVVA-GAGSNSTSEAVELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKA 146 (315)
T ss_dssp HHHHHHHHHHTTSSCBEE-ECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCcEEE-eCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHc
Confidence 344444442 4789953 34444433333 344468999999999999888776665555554444
No 388
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=89.17 E-value=0.9 Score=39.60 Aligned_cols=42 Identities=17% Similarity=0.131 Sum_probs=36.3
Q ss_pred ChHHHHHHHhhc-CcceEeeccccchHHHHHHHHcCCCeee-ecC
Q 037779 80 DPQLIKQIKSSV-TIPVMAKARIGHFVEAQILEAIGVDYVD-ESE 122 (310)
Q Consensus 80 ~~~~i~~i~~~~-~lPv~~kd~i~~~~~~~~~~~aGad~v~-~~~ 122 (310)
+.+.++++++.+ ++|+++..+|.+.++++.+. .|||.|. ++.
T Consensus 167 ~~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVGSa 210 (228)
T 3vzx_A 167 DIEAVKKTKAVLETSTLFYGGGIKDAETAKQYA-EHADVIVVGNA 210 (228)
T ss_dssp CHHHHHHHHHHCSSSEEEEESSCCSHHHHHHHH-TTCSEEEECTH
T ss_pred CHHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHH-hCCCEEEEChH
Confidence 699999999999 89999999998888887776 6999988 443
No 389
>2i14_A Nicotinate-nucleotide pyrophosphorylase; ligand binding, phosphoribosylpyrophosphate, Zn metal ION, structural genomics, PSI; HET: PCP; 2.90A {Pyrococcus furiosus} SCOP: c.1.17.1 d.41.2.1
Probab=89.13 E-value=1 Score=42.43 Aligned_cols=32 Identities=19% Similarity=0.382 Sum_probs=28.1
Q ss_pred EEccCCCCCHHHHHHHHHcCCCEEEEccccccCC
Q 037779 226 HFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSG 259 (310)
Q Consensus 226 ~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~ 259 (310)
++++||| +.+++.++.+. +|.+.||+.++..+
T Consensus 271 I~aSggl-~~~~i~~l~~~-vD~~gvGt~l~~~~ 302 (395)
T 2i14_A 271 IFVSGGL-DEEKIKEIVDV-VDAFGVGGAIASAK 302 (395)
T ss_dssp EEEESSC-CHHHHHTTGGG-CSEEEECHHHHTCC
T ss_pred EEEECCC-CHHHHHHHHHh-CCEEEeCcccCCCC
Confidence 3789999 69999999999 99999999887643
No 390
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=89.11 E-value=6.9 Score=37.10 Aligned_cols=49 Identities=10% Similarity=-0.121 Sum_probs=37.7
Q ss_pred cHHHHHHHHhcCCCC-EEE--EccCCCCCHHHHHHHHHcCCCEEEEccccccC
Q 037779 209 PYDLVMQTKQLGRLP-VVH--FAAGGVATPADAAMMMQLGCDGVFVGSGVFKS 258 (310)
Q Consensus 209 ~~~l~~~i~~~~~iP-Vv~--ia~GGI~t~~di~~~~~~GadgV~VGsai~~~ 258 (310)
+++.++.+.+..++| +|. =...|+ +.++++++.+.|..-+=||+.+..+
T Consensus 236 d~e~l~~I~~~v~~P~LVle~HGgSg~-~~e~l~~~v~~Gi~kiNV~t~l~~a 287 (420)
T 2fiq_A 236 QPQEAQALAQWIENTRMVYEAHSTDYQ-TRTAYWELVRDHFAILKVGPALTFA 287 (420)
T ss_dssp CGGGGHHHHHHHTTSSCEEEESCCTTC-CHHHHHHHHHTTEEEEEECHHHHHH
T ss_pred CHHHHHHHHHhcCCCCEEEecCCCCCC-CHHHHHHHHHcCCCEEEECHHHHHH
Confidence 456667777766679 763 245677 5899999999999999999988763
No 391
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=89.09 E-value=2 Score=38.80 Aligned_cols=63 Identities=14% Similarity=0.160 Sum_probs=39.3
Q ss_pred HHHHHHHhc--CCCCEEEEccCCCCCHHHH---HHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHc
Q 037779 211 DLVMQTKQL--GRLPVVHFAAGGVATPADA---AMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTN 274 (310)
Q Consensus 211 ~l~~~i~~~--~~iPVv~ia~GGI~t~~di---~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~ 274 (310)
++++.+.+. .++||++ -.|+.++.+.+ +.+.++|||++++..-.|..++.....+-|....++
T Consensus 72 ~v~~~~~~~~~grvpvia-Gvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a 139 (304)
T 3l21_A 72 ELLRAVLEAVGDRARVIA-GAGTYDTAHSIRLAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADA 139 (304)
T ss_dssp HHHHHHHHHHTTTSEEEE-ECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHhCCCCeEEE-eCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh
Confidence 344444442 4789963 34555443333 334457999999999998888776666555555454
No 392
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=89.09 E-value=9.6 Score=33.24 Aligned_cols=191 Identities=14% Similarity=0.128 Sum_probs=111.9
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeee-ecC-
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVD-ESE- 122 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~-~~~- 122 (310)
.+.|..++++||++|..- + ..|.|.- ..++++.+++.++.|+=.-... +.+..+++.+.--+.+. .++
T Consensus 28 v~aA~~ae~aGAdgITvH-l-ReDrRHI-------~d~Dv~~L~~~~~~~lNlE~a~-t~emi~ia~~~kP~~vtLVPE~ 97 (243)
T 1m5w_A 28 VQAAFIAEQAGADGITVH-L-REDRRHI-------TDRDVRILRQTLDTRMNLEMAV-TEEMLAIAVETKPHFCCLVPEK 97 (243)
T ss_dssp HHHHHHHHTTTCSEEEEE-C-CTTCSSS-------CHHHHHHHHHHCSSEEEEEECS-SHHHHHHHHHHCCSEEEECCCC
T ss_pred HHHHHHHHHcCCCEEEeC-C-CCCcccC-------CHHHHHHHHHhcCCCEEeccCC-CHHHHHHHHHcCCCEEEECCCC
Confidence 378999999999998432 1 1244443 3788999998887777332222 22566788888888876 332
Q ss_pred --------CCCh-------hHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcc
Q 037779 123 --------VLTP-------ADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGD 187 (310)
Q Consensus 123 --------~~~~-------~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~ 187 (310)
.+.. ..+++.++..+..+-++++. +++.++.+.+.|+++|=.+ |+.+.++.
T Consensus 98 r~e~TTegGldv~~~~~~l~~~i~~L~~~GIrVSLFIDp-d~~qi~aA~~~GA~~IELh----TG~Ya~a~--------- 163 (243)
T 1m5w_A 98 RQEVTTEGGLDVAGQRDKMRDACKRLADAGIQVSLFIDA-DEEQIKAAAEVGAPFIEIH----TGCYADAK--------- 163 (243)
T ss_dssp SSCSSCCSCCCSGGGHHHHHHHHHHHHHTTCEEEEEECS-CHHHHHHHHHTTCSEEEEE----CHHHHHCC---------
T ss_pred CCCcCCCcchhHHhhHHHHHHHHHHHHHCCCEEEEEeCC-CHHHHHHHHHhCcCEEEEe----chhhhcCC---------
Confidence 1111 24455565556556667763 7788889999999999876 11111100
Q ss_pred eecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHc-CCCEEEEccccccCC---CHHH
Q 037779 188 IRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQL-GCDGVFVGSGVFKSG---DPVR 263 (310)
Q Consensus 188 ~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~-GadgV~VGsai~~~~---dp~~ 263 (310)
.....+. .+..-.+.... .....+-| =|.-|+ +.+++..+.+. +..-+-+|-+|+..- -..+
T Consensus 164 ----~~~~~~~------el~~i~~aa~~-A~~lGL~V--nAGHgL-~y~Nv~~ia~ip~i~ElnIGHaiia~Al~~Gl~~ 229 (243)
T 1m5w_A 164 ----TDAEQAQ------ELARIAKAATF-AASLGLKV--NAGHGL-TYHNVKAIAAIPEMHELNIGHAIIGRAVMTGLKD 229 (243)
T ss_dssp ----SHHHHHH------HHHHHHHHHHH-HHHTTCEE--EEESSC-CTTTHHHHHTCTTEEEEEECHHHHHHHHHHCHHH
T ss_pred ----CchhHHH------HHHHHHHHHHH-HHHcCCEE--ecCCCC-CHHHHHHHhhCCCCeEEccCHHHHHHHHHHhHHH
Confidence 0000000 00000001111 11134566 568899 58999988764 788899998877521 1345
Q ss_pred HHHHHHHHHH
Q 037779 264 RARAIVQAVT 273 (310)
Q Consensus 264 ~~~~~~~~~~ 273 (310)
++++|++.+.
T Consensus 230 aV~~m~~~~~ 239 (243)
T 1m5w_A 230 AVAEMKRLML 239 (243)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6666666654
No 393
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=89.04 E-value=1.9 Score=38.93 Aligned_cols=62 Identities=19% Similarity=0.250 Sum_probs=38.5
Q ss_pred HHHHHHhc--CCCCEEEEccCCCCCHHHH---HHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHc
Q 037779 212 LVMQTKQL--GRLPVVHFAAGGVATPADA---AMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTN 274 (310)
Q Consensus 212 l~~~i~~~--~~iPVv~ia~GGI~t~~di---~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~ 274 (310)
+++.+.+. .++||+ +-.|+.++.+.+ +.+.++|||++++..-.|..++.....+-|....++
T Consensus 58 v~~~~~~~~~grvpvi-aGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a 124 (297)
T 2rfg_A 58 VVALVAEQAQGRVPVI-AGAGSNNPVEAVRYAQHAQQAGADAVLCVAGYYNRPSQEGLYQHFKMVHDA 124 (297)
T ss_dssp HHHHHHHHHTTSSCBE-EECCCSSHHHHHHHHHHHHHHTCSEEEECCCTTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCeEE-EccCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHh
Confidence 44444432 468996 344555444433 334457999999999999877776665555554443
No 394
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=89.03 E-value=2.6 Score=37.80 Aligned_cols=63 Identities=22% Similarity=0.317 Sum_probs=38.6
Q ss_pred HHHHHHHhc--CCCCEEEEccCCCCCHHHHHHHH---HcCCCEEEEccccccCCCHHHHHHHHHHHHHc
Q 037779 211 DLVMQTKQL--GRLPVVHFAAGGVATPADAAMMM---QLGCDGVFVGSGVFKSGDPVRRARAIVQAVTN 274 (310)
Q Consensus 211 ~l~~~i~~~--~~iPVv~ia~GGI~t~~di~~~~---~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~ 274 (310)
++++.+.+. .++||+ +-.|+.++.+.+.... ++|||++++..-.|..++.....+-|....++
T Consensus 58 ~v~~~~~~~~~gr~pvi-aGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a 125 (292)
T 2ojp_A 58 DVVMMTLDLADGRIPVI-AGTGANATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEH 125 (292)
T ss_dssp HHHHHHHHHHTTSSCEE-EECCCSSHHHHHHHHHHTTTSSCSEEEEECCCSSCCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCCcEE-EecCCccHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh
Confidence 344444432 468996 3455554444443333 46999999999999887776655555554443
No 395
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=88.98 E-value=4.7 Score=36.74 Aligned_cols=112 Identities=20% Similarity=0.176 Sum_probs=65.2
Q ss_pred cCCCHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccc-----------------
Q 037779 41 DVVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGH----------------- 103 (310)
Q Consensus 41 ~~~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~----------------- 103 (310)
+..+++.++++.++|++.| .|+..+. .+.+..+.+.++.|+++...-+.
T Consensus 111 DT~~~~Va~aAl~aGa~iI-------NDVsg~~-------~~~m~~v~a~~g~~vVlMh~~G~P~tmq~~~~ydvv~ev~ 176 (314)
T 3tr9_A 111 DTSRPRVMREAVNTGADMI-------NDQRALQ-------LDDALTTVSALKTPVCLMHFPSETRKPGSTTHFYFLQSVK 176 (314)
T ss_dssp ECSCHHHHHHHHHHTCCEE-------EETTTTC-------STTHHHHHHHHTCCEEEECCCCTTCCTTSSCHHHHHHHHH
T ss_pred eCCCHHHHHHHHHcCCCEE-------EECCCCC-------chHHHHHHHHhCCeEEEECCCCCCcccccccccchHHHHH
Confidence 4455899999999999987 3443221 12344555567888887432221
Q ss_pred ---hHHHHHHHHcCCC---eeeec------CCCChh---HHHHHHHh-cCCCCcEEeecCC-----------HH------
Q 037779 104 ---FVEAQILEAIGVD---YVDES------EVLTPA---DEENHINK-HNFRVPFVCGCRN-----------LG------ 150 (310)
Q Consensus 104 ---~~~~~~~~~aGad---~v~~~------~~~~~~---~~~~~~~~-~~~~l~v~~~v~t-----------~~------ 150 (310)
.+.++.+.++|.+ .++.+ ...+.. ++.+.+.. +.++.++++++.. ++
T Consensus 177 ~~l~~~i~~a~~~GI~~~~IilDPG~G~~~F~Kt~~~n~~lL~~l~~l~~lg~PvL~G~SRKsfig~~~~~~~~~R~~~t 256 (314)
T 3tr9_A 177 KELQESIQRCKKAGISEDRIIIDPGFGQGNYGKNVSENFYLLNKLPEFVAMGLPVLSGWSRKSMIGDVLNQPPENRLFGS 256 (314)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEECCCCSGGGCCCHHHHHHHHHTTHHHHTTSSCBEECCTTCHHHHHHHTCCGGGCHHHH
T ss_pred HHHHHHHHHHHHcCCCHhHEEEeCCCCchhhcCCHHHHHHHHHHHHHHhcCCCCEEEEechhhhhhhhcCCChHHhHHHH
Confidence 1345677779996 44422 223333 23333333 3567888887732 11
Q ss_pred --HHHHHHHhCCCEEEEe
Q 037779 151 --ESLRRIREGAAMIRTK 166 (310)
Q Consensus 151 --ea~~a~~~Gad~I~v~ 166 (310)
-...+...|++++.++
T Consensus 257 ~a~~~~a~~~Ga~IvRvH 274 (314)
T 3tr9_A 257 IAADVLAVYHGASIIRTH 274 (314)
T ss_dssp HHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHHcCCcEEEeC
Confidence 1234456899999997
No 396
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=88.89 E-value=12 Score=33.29 Aligned_cols=82 Identities=15% Similarity=0.187 Sum_probs=46.2
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCCh---HHHHHHHhhc--CcceEeeccccc----hHHHHHHHHcCCC
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDP---QLIKQIKSSV--TIPVMAKARIGH----FVEAQILEAIGVD 116 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~---~~i~~i~~~~--~lPv~~kd~i~~----~~~~~~~~~aGad 116 (310)
+.++.+.+.|++++..+- .|.+ +..+... +.++.+.+.+ ++||++...-.. .+.++.+.++|||
T Consensus 27 ~lv~~li~~Gv~gl~v~G--ttGE-----~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gad 99 (292)
T 3daq_A 27 AHVNFLLENNAQAIIVNG--TTAE-----SPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGAD 99 (292)
T ss_dssp HHHHHHHHTTCCEEEESS--GGGT-----GGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHcCCCEEEECc--cccc-----cccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCC
Confidence 678889999999985441 0100 1112112 2344444443 589998754332 2455677789999
Q ss_pred eee-ecCC---CChhHHHHHHH
Q 037779 117 YVD-ESEV---LTPADEENHIN 134 (310)
Q Consensus 117 ~v~-~~~~---~~~~~~~~~~~ 134 (310)
+++ .+.. .+.+.+.+.++
T Consensus 100 avlv~~P~y~~~~~~~l~~~f~ 121 (292)
T 3daq_A 100 AIMLITPYYNKTNQRGLVKHFE 121 (292)
T ss_dssp EEEEECCCSSCCCHHHHHHHHH
T ss_pred EEEECCCCCCCCCHHHHHHHHH
Confidence 988 3322 23444555444
No 397
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=88.84 E-value=3 Score=39.00 Aligned_cols=116 Identities=15% Similarity=0.080 Sum_probs=69.3
Q ss_pred HHHHHHH-HcCCcEEEecccc----------cc-h---hhhcCC-CCCCC----ChHHHHHHHhhcC-cceEeecccc--
Q 037779 46 EQARIAE-EAGACAVMALERV----------PA-D---IRAQGG-VARMS----DPQLIKQIKSSVT-IPVMAKARIG-- 102 (310)
Q Consensus 46 ~~a~~~~-~~Ga~~I~~l~~~----------~~-d---~r~~~G-~~~~~----~~~~i~~i~~~~~-lPv~~kd~i~-- 102 (310)
+.|+.+. ++|+++| .+|.. |. . ...++| +. .+ ..+.++++|+.++ -||.++....
T Consensus 178 ~AA~~a~~~aGfDgV-Eih~a~GYLl~QFlsp~~N~R~~D~yGG~sl-enR~r~~~eiv~aVr~avg~~~v~vRis~~~~ 255 (379)
T 3aty_A 178 EGAKNAIFKAGFDGV-EIHGANGYLLDAFFRESSNKRQSGPYAGTTI-DTRCQLIYDVTKSVCDAVGSDRVGLRISPLNG 255 (379)
T ss_dssp HHHHHHHHTSCCSEE-EEEECTTSHHHHHHSTTTCCCCSSTTCTTSH-HHHHHHHHHHHHHHHHHHCGGGEEEEECTTCC
T ss_pred HHHHHHHHhcCCCEE-EEcCcCchHHhhccCCCCCccccCCCCccCh-hhhHHHHHHHHHHHHHhcCCCeEEEEECcccc
Confidence 4577888 9999998 55410 11 0 123455 41 11 1344667777764 3787752221
Q ss_pred --------c----hHHHHHHHHcCCCeeeecCCC-----ChhHHHHHHHhcCCCCcEEe--ecCCHHHHHHHHHhC-CCE
Q 037779 103 --------H----FVEAQILEAIGVDYVDESEVL-----TPADEENHINKHNFRVPFVC--GCRNLGESLRRIREG-AAM 162 (310)
Q Consensus 103 --------~----~~~~~~~~~aGad~v~~~~~~-----~~~~~~~~~~~~~~~l~v~~--~v~t~~ea~~a~~~G-ad~ 162 (310)
. ...++.+.++|+|+++.+... .+.+ .+.+++. .++++++ .+ |.++++.+++.| +|+
T Consensus 256 ~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~~-~~~ir~~-~~iPvi~~G~i-t~~~a~~~l~~g~aD~ 332 (379)
T 3aty_A 256 VHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVNQQIGDV-VAWVRGS-YSGVKISNLRY-DFEEADQQIREGKVDA 332 (379)
T ss_dssp GGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTSCCCCCH-HHHHHTT-CCSCEEEESSC-CHHHHHHHHHTTSCSE
T ss_pred cccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCCCCccHH-HHHHHHH-CCCcEEEECCC-CHHHHHHHHHcCCCeE
Confidence 1 123466677999999854311 1224 5556553 3556555 36 899999999887 899
Q ss_pred EEEe
Q 037779 163 IRTK 166 (310)
Q Consensus 163 I~v~ 166 (310)
|.+.
T Consensus 333 V~ig 336 (379)
T 3aty_A 333 VAFG 336 (379)
T ss_dssp EEES
T ss_pred EEec
Confidence 9985
No 398
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=88.83 E-value=0.73 Score=43.78 Aligned_cols=92 Identities=16% Similarity=0.147 Sum_probs=60.2
Q ss_pred cc-ceeeecCCccccCCCHHHHHHHHHcCCcEEEeccccc--chhhh----cC---CCC-CCCChHHHHHHHhhc--Ccc
Q 037779 28 VG-LAQMLRGGVIMDVVTPEQARIAEEAGACAVMALERVP--ADIRA----QG---GVA-RMSDPQLIKQIKSSV--TIP 94 (310)
Q Consensus 28 ~~-~~~~l~~g~i~~~~~~~~a~~~~~~Ga~~I~~l~~~~--~d~r~----~~---G~~-~~~~~~~i~~i~~~~--~lP 94 (310)
.| +.++|+-++-. ..-.++|+.++++|+++|+..|... .|... .+ |.. .....+.++++++.+ ++|
T Consensus 269 ~P~V~VKi~pd~~~-~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iP 347 (415)
T 3i65_A 269 KPLVFVKLAPDLNQ-EQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP 347 (415)
T ss_dssp CCEEEEEECSCCCH-HHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSC
T ss_pred CCeEEEEecCCCCH-HHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCC
Confidence 45 66677654310 0114789999999999997666211 11110 11 210 011246788999888 799
Q ss_pred eEeeccccchHHHHHHHHcCCCeeee
Q 037779 95 VMAKARIGHFVEAQILEAIGVDYVDE 120 (310)
Q Consensus 95 v~~kd~i~~~~~~~~~~~aGad~v~~ 120 (310)
|+....|.+.+++..+..+|||.|.+
T Consensus 348 IIg~GGI~s~eDa~e~l~aGAd~VqI 373 (415)
T 3i65_A 348 IIASGGIFSGLDALEKIEAGASVCQL 373 (415)
T ss_dssp EEECSSCCSHHHHHHHHHHTEEEEEE
T ss_pred EEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 99999998878888888899999873
No 399
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=88.76 E-value=13 Score=33.47 Aligned_cols=82 Identities=11% Similarity=0.033 Sum_probs=46.0
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCCh---HHHHHHHhhc-CcceEeeccccc----hHHHHHHHHcCCCe
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDP---QLIKQIKSSV-TIPVMAKARIGH----FVEAQILEAIGVDY 117 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~---~~i~~i~~~~-~lPv~~kd~i~~----~~~~~~~~~aGad~ 117 (310)
+.++.+.+.|+++|..+. .|.+ +..+... +.++.+.+.+ ++||++...-.. .+.++.+.++|||+
T Consensus 33 ~lv~~li~~Gv~Gl~v~G--tTGE-----~~~Lt~~Er~~v~~~~v~~~grvpViaGvg~~~t~~ai~la~~A~~~Gada 105 (313)
T 3dz1_A 33 RLTDFYAEVGCEGVTVLG--ILGE-----APKLDAAEAEAVATRFIKRAKSMQVIVGVSAPGFAAMRRLARLSMDAGAAG 105 (313)
T ss_dssp HHHHHHHHTTCSEEEEST--GGGT-----GGGSCHHHHHHHHHHHHHHCTTSEEEEECCCSSHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHCCCCEEEeCc--cCcC-----hhhCCHHHHHHHHHHHHHHcCCCcEEEecCCCCHHHHHHHHHHHHHcCCCE
Confidence 678899999999985441 0100 1112222 2344444443 689988754322 24566778899999
Q ss_pred eee-cCC--CChhHHHHHHH
Q 037779 118 VDE-SEV--LTPADEENHIN 134 (310)
Q Consensus 118 v~~-~~~--~~~~~~~~~~~ 134 (310)
++. +.. .+.+.+.+.++
T Consensus 106 vlv~~P~~~~s~~~l~~~f~ 125 (313)
T 3dz1_A 106 VMIAPPPSLRTDEQITTYFR 125 (313)
T ss_dssp EEECCCTTCCSHHHHHHHHH
T ss_pred EEECCCCCCCCHHHHHHHHH
Confidence 983 221 23344554443
No 400
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=88.62 E-value=15 Score=33.90 Aligned_cols=48 Identities=15% Similarity=0.194 Sum_probs=36.2
Q ss_pred cHHHHHHHHhcC-----------CCCEEEEccCCCCCHHHHHHHHHcCCCEEEEcccccc
Q 037779 209 PYDLVMQTKQLG-----------RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 209 ~~~l~~~i~~~~-----------~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~ 257 (310)
++++++.+.+.. ++|+|.=-++|+ +.+++++++++|..-|=++|.+-.
T Consensus 223 ~~~~L~~I~~~v~~~~~~~~~~~~vpLVlHGgSG~-p~e~i~~ai~~GV~KiNi~Tdl~~ 281 (349)
T 3elf_A 223 RPDILAQGQQVAAAKLGLPADAKPFDFVFHGGSGS-LKSEIEEALRYGVVKMNVDTDTQY 281 (349)
T ss_dssp CTHHHHHHHHHHHHHHTCCTTCCCCCEEECCCTTC-CHHHHHHHHHTTEEEEEECHHHHH
T ss_pred CHHHHHHHHHHHHhhcCCccccCCCcEEEeCCCCC-CHHHHHHHHHcCCEEEEcchHHHH
Confidence 456666665432 689876556677 478999999999999999997754
No 401
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=88.57 E-value=16 Score=34.17 Aligned_cols=131 Identities=8% Similarity=0.036 Sum_probs=77.7
Q ss_pred hHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeeee-cCCCChhHHHHHHHhcCCCCcEEee--cCCHHHHHHHHH
Q 037779 81 PQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVDE-SEVLTPADEENHINKHNFRVPFVCG--CRNLGESLRRIR 157 (310)
Q Consensus 81 ~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~~-~~~~~~~~~~~~~~~~~~~l~v~~~--v~t~~ea~~a~~ 157 (310)
...+.+.++..+++++.--+ +...++.+.+.|++.+-+ +..++...+++.+.+ .+.+++++ ..|.+|...|++
T Consensus 103 ~~~L~~~~~~~Gi~~~stpf--D~~svd~l~~~~vd~~KIgS~~~~N~pLL~~va~--~gKPViLStGmaTl~Ei~~Ave 178 (385)
T 1vli_A 103 ILPLLDYCREKQVIFLSTVC--DEGSADLLQSTSPSAFKIASYEINHLPLLKYVAR--LNRPMIFSTAGAEISDVHEAWR 178 (385)
T ss_dssp HHHHHHHHHHTTCEEECBCC--SHHHHHHHHTTCCSCEEECGGGTTCHHHHHHHHT--TCSCEEEECTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCcEEEccC--CHHHHHHHHhcCCCEEEECcccccCHHHHHHHHh--cCCeEEEECCCCCHHHHHHHHH
Confidence 45566777778898866543 335667788899999864 334455666776765 35666664 678898877664
Q ss_pred ----hCC-CEEEEecC-CCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcC-CCCEEEEccC
Q 037779 158 ----EGA-AMIRTKGE-AGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLG-RLPVVHFAAG 230 (310)
Q Consensus 158 ----~Ga-d~I~v~g~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~-~iPVv~ia~G 230 (310)
.|. +++-.+.. .| ++ +++ ..+...+..+++.. ++||. ..+=
T Consensus 179 ~i~~~Gn~~iiLlhc~s~Y---------------------Pt-p~~---------~~nL~aI~~Lk~~f~~lpVG-~SdH 226 (385)
T 1vli_A 179 TIRAEGNNQIAIMHCVAKY---------------------PA-PPE---------YSNLSVIPMLAAAFPEAVIG-FSDH 226 (385)
T ss_dssp HHHTTTCCCEEEEEECSSS---------------------SC-CGG---------GCCTTHHHHHHHHSTTSEEE-EEEC
T ss_pred HHHHCCCCcEEEEeccCCC---------------------CC-Chh---------hcCHHHHHHHHHHcCCCCEE-eCCC
Confidence 466 66655522 12 11 111 11334556666665 68884 3222
Q ss_pred CCCCHHHHHHHHHcCCC
Q 037779 231 GVATPADAAMMMQLGCD 247 (310)
Q Consensus 231 GI~t~~di~~~~~~Gad 247 (310)
..+...-...+..+||+
T Consensus 227 t~G~~~~~~AAvAlGA~ 243 (385)
T 1vli_A 227 SEHPTEAPCAAVRLGAK 243 (385)
T ss_dssp CSSSSHHHHHHHHTTCS
T ss_pred CCCchHHHHHHHHcCCC
Confidence 22213445566789999
No 402
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=88.56 E-value=1.4 Score=42.43 Aligned_cols=110 Identities=13% Similarity=0.122 Sum_probs=69.3
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeeeecC--
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVDESE-- 122 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~~~~-- 122 (310)
.+.+..+.+.|++.+..- + -+|.. ..-.+.++.+++..++|++.+... +.+.+..+. |+|.|....
T Consensus 230 ~~~a~~l~~~gvd~lvvd----t----a~G~~-~~~L~~I~~l~~~~~vpvi~k~v~-~~~~a~~l~--G~d~v~vg~g~ 297 (486)
T 2cu0_A 230 IKRAIELDKAGVDVIVVD----T----AHAHN-LKAIKSMKEMRQKVDADFIVGNIA-NPKAVDDLT--FADAVKVGIGP 297 (486)
T ss_dssp HHHHHHHHHTTCSEEEEE----C----SCCCC-HHHHHHHHHHHHTCCSEEEEEEEC-CHHHHTTCT--TSSEEEECSSC
T ss_pred HHHHHHHHHhcCCceEEE----e----cCCcE-eehhhHHHHHHHHhCCccccCCcC-CHHHHHHhh--CCCeEEEeeee
Confidence 567888999999987321 1 11210 111566788888889999887554 334444444 999986310
Q ss_pred ------------CCChh----HHHHHHHhcCCCCcEEe--ecCCHHHHHHHHHhCCCEEEEecC
Q 037779 123 ------------VLTPA----DEENHINKHNFRVPFVC--GCRNLGESLRRIREGAAMIRTKGE 168 (310)
Q Consensus 123 ------------~~~~~----~~~~~~~~~~~~l~v~~--~v~t~~ea~~a~~~Gad~I~v~g~ 168 (310)
..+.. ++.+...+ .++++++ ++.+..++.+++.+|||.+.+..+
T Consensus 298 g~~~~~r~~~~~g~~~~~~l~~~~~~~~~--~~vpVia~GGi~~~~di~kalalGA~~v~~g~~ 359 (486)
T 2cu0_A 298 GSICTTRIVAGVGVPQITAVAMVADRAQE--YGLYVIADGGIRYSGDIVKAIAAGADAVMLGNL 359 (486)
T ss_dssp STTBCHHHHTCCCCCHHHHHHHHHHHHHH--HTCEEEEESCCCSHHHHHHHHHTTCSEEEESTT
T ss_pred ccceeeeEEeecCcchHHHHHHHHHHHHH--cCCcEEecCCCCCHHHHHHHHHcCCCceeeChh
Confidence 00111 11112222 2578888 699999999999999999998644
No 403
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=88.55 E-value=1.9 Score=38.72 Aligned_cols=63 Identities=24% Similarity=0.284 Sum_probs=39.0
Q ss_pred HHHHHHHhc--CCCCEEEEccCCCCCHHHHH---HHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHc
Q 037779 211 DLVMQTKQL--GRLPVVHFAAGGVATPADAA---MMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTN 274 (310)
Q Consensus 211 ~l~~~i~~~--~~iPVv~ia~GGI~t~~di~---~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~ 274 (310)
++++.+.+. .++||+ +-.|+-++.+.+. .+.++|||++++..-.|..++.....+-|....++
T Consensus 57 ~v~~~~~~~~~gr~pvi-aGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a 124 (292)
T 2vc6_A 57 QVVEITIKTANGRVPVI-AGAGSNSTAEAIAFVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAA 124 (292)
T ss_dssp HHHHHHHHHHTTSSCBE-EECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCcEE-EecCCccHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHh
Confidence 344444432 478996 3455554444333 34457999999999999887776665555554443
No 404
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=88.53 E-value=0.97 Score=41.74 Aligned_cols=72 Identities=19% Similarity=0.085 Sum_probs=50.2
Q ss_pred HHHHHHHHcCCcEEEecc-cccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHHHHHHcC-CCeee
Q 037779 46 EQARIAEEAGACAVMALE-RVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIG-VDYVD 119 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~-~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aG-ad~v~ 119 (310)
++++.++++|+++|.+.+ ..........+ ...+.+.++++++.+++||+....+.+.+.++.+.+.| ||.|.
T Consensus 243 ~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~--~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~ 316 (349)
T 3hgj_A 243 AFARRLKELGVDLLDCSSGGVVLRVRIPLA--PGFQVPFADAVRKRVGLRTGAVGLITTPEQAETLLQAGSADLVL 316 (349)
T ss_dssp HHHHHHHHTTCCEEEEECCCSCSSSCCCCC--TTTTHHHHHHHHHHHCCEEEECSSCCCHHHHHHHHHTTSCSEEE
T ss_pred HHHHHHHHcCCCEEEEecCCcCcccccCCC--ccccHHHHHHHHHHcCceEEEECCCCCHHHHHHHHHCCCceEEE
Confidence 679999999999985442 10000000000 01246788999999999999998887777888888888 99987
No 405
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=88.48 E-value=13 Score=33.20 Aligned_cols=83 Identities=18% Similarity=0.139 Sum_probs=46.7
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCCh---HHHHHHHhhc---CcceEeeccccc----hHHHHHHHHcCC
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDP---QLIKQIKSSV---TIPVMAKARIGH----FVEAQILEAIGV 115 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~---~~i~~i~~~~---~lPv~~kd~i~~----~~~~~~~~~aGa 115 (310)
+.++.+.+.|++++..+. .| +-+..+... +.++.+.+.+ ++||++...-.. .+.++.+.++||
T Consensus 32 ~lv~~li~~Gv~gl~v~G--tt-----GE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Ga 104 (301)
T 3m5v_A 32 RLIKRQIENGIDAVVPVG--TT-----GESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGA 104 (301)
T ss_dssp HHHHHHHHTTCCEEECSS--TT-----TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEECc--cc-----cChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCC
Confidence 678889999999984431 01 000112112 2344444443 589998754322 245667788999
Q ss_pred Ceee-ecCC---CChhHHHHHHHh
Q 037779 116 DYVD-ESEV---LTPADEENHINK 135 (310)
Q Consensus 116 d~v~-~~~~---~~~~~~~~~~~~ 135 (310)
|+++ .+.. .+.+.+.+.++.
T Consensus 105 davlv~~P~y~~~s~~~l~~~f~~ 128 (301)
T 3m5v_A 105 DGILSVAPYYNKPTQQGLYEHYKA 128 (301)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHH
T ss_pred CEEEEcCCCCCCCCHHHHHHHHHH
Confidence 9988 3322 234455555543
No 406
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=88.47 E-value=7.4 Score=34.59 Aligned_cols=189 Identities=16% Similarity=0.139 Sum_probs=111.6
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeee-ecCC
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVD-ESEV 123 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~-~~~~ 123 (310)
.+.|..++++||++|..- + ..|.|.- ..++++.+++.++.|+=.-.-. +.+..+++.+.--+.+. .++.
T Consensus 56 v~aA~~ae~aGAdGITvH-l-ReDrRHI-------~d~Dv~~L~~~i~t~lNlEma~-t~emi~ial~~kP~~vtLVPEk 125 (278)
T 3gk0_A 56 VRAALAAEDAGADAITLH-L-REDRRHI-------VDADVRTLRPRVKTRMNLECAV-TPEMLDIACEIRPHDACLVPEK 125 (278)
T ss_dssp HHHHHHHHHTTCSEEEEE-C-CTTCSSS-------CHHHHHHHHHHCSSCEEEEECS-SHHHHHHHHHHCCSEEEECCCS
T ss_pred HHHHHHHHHcCCCEEEec-c-CCCcccC-------CHHHHHHHHHHcCCCEEeecCC-CHHHHHHHHHcCCCEEEECCCC
Confidence 377888999999998432 1 1244433 3778999998888877433222 23566788888888875 3211
Q ss_pred ------------C-C---hhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcc
Q 037779 124 ------------L-T---PADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGD 187 (310)
Q Consensus 124 ------------~-~---~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~ 187 (310)
. . ...+++.++..+..+-++++. +++.++.+.+.|+|+|=.+ |+.+.++
T Consensus 126 reE~TTegGlDv~~~~~~L~~~i~~L~~~GIrVSLFIDp-d~~qI~aA~~~GAd~IELh----TG~YA~a---------- 190 (278)
T 3gk0_A 126 RSELTTEGGLDVVGHFDAVRAACKQLADAGVRVSLFIDP-DEAQIRAAHETGAPVIELH----TGRYADA---------- 190 (278)
T ss_dssp GGGBCSSSSBCTTTTHHHHHHHHHHHHHTTCEEEEEECS-CHHHHHHHHHHTCSEEEEC----CHHHHTC----------
T ss_pred CCCcCCCcchhhhccHHHHHHHHHHHHHCCCEEEEEeCC-CHHHHHHHHHhCcCEEEEe----cchhhcc----------
Confidence 1 1 123445555555556677773 6778889999999999876 1111100
Q ss_pred eecccccCchhHHhhhccCCCcHHHHHHH---HhcCCCCEEEEccCCCCCHHHHHHHHHc-CCCEEEEccccccCC---C
Q 037779 188 IRVLRNMDDDEVFTFAKNIAAPYDLVMQT---KQLGRLPVVHFAAGGVATPADAAMMMQL-GCDGVFVGSGVFKSG---D 260 (310)
Q Consensus 188 ~~~l~~~~~d~~~~~~~~~~~~~~l~~~i---~~~~~iPVv~ia~GGI~t~~di~~~~~~-GadgV~VGsai~~~~---d 260 (310)
. ..+. ....++.+... .....+-| =|.-|+ +.+++..+.+. +..-+-+|-+|+..- -
T Consensus 191 ----~--~~~~-------~~~el~rl~~aA~~A~~lGL~V--nAGHGL-~y~Nv~~ia~ip~i~ElnIGHaiIa~Al~~G 254 (278)
T 3gk0_A 191 ----H--DAAE-------QQREFERIATGVDAGIALGLKV--NAGHGL-HYTNVQAIAALPGIAELNIGHAIVAHAVFVG 254 (278)
T ss_dssp ----S--SHHH-------HHHHHHHHHHHHHHHHHTTCEE--EECTTC-CTTTHHHHHTCTTEEEEEECHHHHHHHHHHC
T ss_pred ----C--Cchh-------HHHHHHHHHHHHHHHHHcCCEE--ecCCCC-CHHHHHHHHhCCCCeEEecCHHHHHHHHHHh
Confidence 0 0000 00001111111 11134556 568899 58999887664 788899998877521 1
Q ss_pred HHHHHHHHHHHHHc
Q 037779 261 PVRRARAIVQAVTN 274 (310)
Q Consensus 261 p~~~~~~~~~~~~~ 274 (310)
..+.++++++.+..
T Consensus 255 l~~AVr~mk~lm~~ 268 (278)
T 3gk0_A 255 WDNAVREMKAIMVA 268 (278)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 34567777777654
No 407
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=88.47 E-value=1 Score=41.78 Aligned_cols=73 Identities=36% Similarity=0.434 Sum_probs=52.6
Q ss_pred cCCCHHHHHHHHHcCCcEEEecccccchhhhcC---CCCC---------CCChHHHHHHHhhcCcceEeeccccchHHHH
Q 037779 41 DVVTPEQARIAEEAGACAVMALERVPADIRAQG---GVAR---------MSDPQLIKQIKSSVTIPVMAKARIGHFVEAQ 108 (310)
Q Consensus 41 ~~~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~---G~~~---------~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~ 108 (310)
.+.+++.++.+.+.|+|.|..-+ ..++ |... ....+.++++++.+++||++-..+.+.+.+.
T Consensus 151 ~v~t~~~a~~a~~~GaD~i~v~g------~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~~iPViaaGGI~~~~~~~ 224 (369)
T 3bw2_A 151 TATTPEEARAVEAAGADAVIAQG------VEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAVDIPVVAAGGIMRGGQIA 224 (369)
T ss_dssp EESSHHHHHHHHHTTCSEEEEEC------TTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHCSSCEEEESSCCSHHHHH
T ss_pred ECCCHHHHHHHHHcCCCEEEEeC------CCcCCcCCCcccccccccccccHHHHHHHHHHhcCceEEEECCCCCHHHHH
Confidence 34567889999999999984311 1122 1110 1226788899988999999998886667777
Q ss_pred HHHHcCCCeee
Q 037779 109 ILEAIGVDYVD 119 (310)
Q Consensus 109 ~~~~aGad~v~ 119 (310)
.+.++|||.|.
T Consensus 225 ~~l~~GAd~V~ 235 (369)
T 3bw2_A 225 AVLAAGADAAQ 235 (369)
T ss_dssp HHHHTTCSEEE
T ss_pred HHHHcCCCEEE
Confidence 88889999987
No 408
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=88.38 E-value=6.4 Score=35.18 Aligned_cols=84 Identities=15% Similarity=0.137 Sum_probs=45.9
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCC---h----HHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCee
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSD---P----QLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYV 118 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~---~----~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v 118 (310)
+.|+.+.+.||+.| +++...|.+ |+..... . ..++.+++. ++|+++..+ ..+-++.+.++|++.|
T Consensus 33 ~~a~~~v~~GAdiI-DIGgestrp----ga~~v~~~eE~~Rv~pvi~~l~~~-~~piSIDT~--~~~va~aAl~aGa~iI 104 (280)
T 1eye_A 33 KHGLAMAAAGAGIV-DVGGESSRP----GATRVDPAVETSRVIPVVKELAAQ-GITVSIDTM--RADVARAALQNGAQMV 104 (280)
T ss_dssp HHHHHHHHTTCSEE-EEECC------------------HHHHHHHHHHHHHT-TCCEEEECS--CHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHCCCCEE-EECCccCCC----CCCCCCHHHHHHHHHHHHHHhhcC-CCEEEEeCC--CHHHHHHHHHcCCCEE
Confidence 67999999999998 665222211 1100111 1 123344433 889987654 3356788888999999
Q ss_pred e-ecCCCChhHHHHHHHhcC
Q 037779 119 D-ESEVLTPADEENHINKHN 137 (310)
Q Consensus 119 ~-~~~~~~~~~~~~~~~~~~ 137 (310)
- ++.....++....+.+++
T Consensus 105 Ndvsg~~~d~~m~~~~a~~~ 124 (280)
T 1eye_A 105 NDVSGGRADPAMGPLLAEAD 124 (280)
T ss_dssp EETTTTSSCTTHHHHHHHHT
T ss_pred EECCCCCCCHHHHHHHHHhC
Confidence 6 332211334555555543
No 409
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=88.34 E-value=8.4 Score=34.82 Aligned_cols=136 Identities=12% Similarity=0.096 Sum_probs=69.7
Q ss_pred ccceeeecCCccccCCCHHHHHHHHHcCCcEEEecccccchhhh--cCCCCCCCChHHHHHHHhhc------CcceEeec
Q 037779 28 VGLAQMLRGGVIMDVVTPEQARIAEEAGACAVMALERVPADIRA--QGGVARMSDPQLIKQIKSSV------TIPVMAKA 99 (310)
Q Consensus 28 ~~~~~~l~~g~i~~~~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~--~~G~~~~~~~~~i~~i~~~~------~lPv~~kd 99 (310)
.|+..=+.-|.-....-.+.++.++++|+.++ .++......|+ ..|....+..+.+.+|+... +.++++.-
T Consensus 81 ~PviaD~d~Gyg~~~~v~~tv~~l~~aGaagv-~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~A 159 (302)
T 3fa4_A 81 TPVIADADTGYGGPIMVARTTEQYSRSGVAAF-HIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIA 159 (302)
T ss_dssp SCEEEECTTTTSSHHHHHHHHHHHHHTTCCEE-EECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEE
T ss_pred CCEEEECCCCCCCHHHHHHHHHHHHHcCCcEE-EECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 35555555553111001366899999999998 46521111111 11222233334455554332 45666654
Q ss_pred cccc---------hHHHHHHHHcCCCeeeecCCCChhHHHHHHHhcCCCCcEEeec----CCHH-HHHHHHHhCCCEEEE
Q 037779 100 RIGH---------FVEAQILEAIGVDYVDESEVLTPADEENHINKHNFRVPFVCGC----RNLG-ESLRRIREGAAMIRT 165 (310)
Q Consensus 100 ~i~~---------~~~~~~~~~aGad~v~~~~~~~~~~~~~~~~~~~~~l~v~~~v----~t~~-ea~~a~~~Gad~I~v 165 (310)
+.+. .+.++.+.++|||.|......+++++.+..+... +.++.+.+ .++. ......++|...+..
T Consensus 160 RTDa~~~~gldeAi~Ra~ay~eAGAD~ifi~g~~~~~ei~~~~~~~~-~~Pl~~n~~~~g~~p~~~~~eL~~lGv~~v~~ 238 (302)
T 3fa4_A 160 RTDSLQTHGYEESVARLRAARDAGADVGFLEGITSREMARQVIQDLA-GWPLLLNMVEHGATPSISAAEAKEMGFRIIIF 238 (302)
T ss_dssp EECCHHHHCHHHHHHHHHHHHTTTCSEEEETTCCCHHHHHHHHHHTT-TSCEEEECCTTSSSCCCCHHHHHHHTCSEEEE
T ss_pred EecccccCCHHHHHHHHHHHHHcCCCEEeecCCCCHHHHHHHHHHhc-CCceeEEEecCCCCCCCCHHHHHHcCCCEEEE
Confidence 4431 2456777889999998665556666665555421 34544421 1110 233445669887765
No 410
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=88.33 E-value=1.9 Score=38.75 Aligned_cols=63 Identities=10% Similarity=0.090 Sum_probs=38.3
Q ss_pred HHHHHHHhc--CCCCEEEEccCCCCCHHHH---HHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHc
Q 037779 211 DLVMQTKQL--GRLPVVHFAAGGVATPADA---AMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTN 274 (310)
Q Consensus 211 ~l~~~i~~~--~~iPVv~ia~GGI~t~~di---~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~ 274 (310)
++++.+.+. .++||+ +-.|+.++.+.+ +.+.++|||++++..-.|..++.....+-|....++
T Consensus 61 ~v~~~~~~~~~grvpvi-aGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a 128 (293)
T 1f6k_A 61 EIFRIAKDEAKDQIALI-AQVGSVNLKEAVELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAE 128 (293)
T ss_dssp HHHHHHHHHHTTSSEEE-EECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCeEE-EecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh
Confidence 344444432 478996 345555444433 333457999999999999887766555555444443
No 411
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=88.31 E-value=2.4 Score=37.99 Aligned_cols=61 Identities=15% Similarity=0.248 Sum_probs=36.8
Q ss_pred HHHHHHhc--CCCCEEEEccCCCCCHHHH---HHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHH
Q 037779 212 LVMQTKQL--GRLPVVHFAAGGVATPADA---AMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVT 273 (310)
Q Consensus 212 l~~~i~~~--~~iPVv~ia~GGI~t~~di---~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~ 273 (310)
+++.+.+. .++||++ -.|+-++.+.+ +.+.++|||++++..-.|..++.....+-|....+
T Consensus 60 v~~~~~~~~~grvpvia-Gvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~ 125 (292)
T 3daq_A 60 ILKTVIDLVDKRVPVIA-GTGTNDTEKSIQASIQAKALGADAIMLITPYYNKTNQRGLVKHFEAIAD 125 (292)
T ss_dssp HHHHHHHHHTTSSCEEE-ECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCcEEE-eCCcccHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHH
Confidence 44444332 4789953 33444433333 23445799999999998888776655555544444
No 412
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=88.29 E-value=2.5 Score=38.17 Aligned_cols=63 Identities=14% Similarity=0.188 Sum_probs=39.1
Q ss_pred HHHHHHHhc--C-CCCEEEEccCCCCCHHHHH---HHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHc
Q 037779 211 DLVMQTKQL--G-RLPVVHFAAGGVATPADAA---MMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTN 274 (310)
Q Consensus 211 ~l~~~i~~~--~-~iPVv~ia~GGI~t~~di~---~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~ 274 (310)
++++.+.+. . ++||++ -.|+-++.+.+. .+.++|||++++..-.|..++.....+-|....++
T Consensus 64 ~v~~~~~~~~~g~rvpvia-Gvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a 132 (301)
T 3m5v_A 64 TCIEIAVETCKGTKVKVLA-GAGSNATHEAVGLAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQS 132 (301)
T ss_dssp HHHHHHHHHHTTSSCEEEE-ECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCeEEE-eCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHh
Confidence 344444442 4 689953 344554433333 34468999999999999888776665555555444
No 413
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=88.18 E-value=0.43 Score=40.52 Aligned_cols=41 Identities=24% Similarity=0.327 Sum_probs=37.5
Q ss_pred hHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeeeec
Q 037779 81 PQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVDES 121 (310)
Q Consensus 81 ~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~~~ 121 (310)
++.++++++.+++|+++..++.+.++++.+.++||++|..+
T Consensus 139 p~iI~~i~~~~~~PiIaGGlI~~~edv~~al~aGA~aVsTs 179 (192)
T 3kts_A 139 PEQVQKMTQKLHIPVIAGGLIETSEQVNQVIASGAIAVTTS 179 (192)
T ss_dssp HHHHHHHHHHHCCCEEEESSCCSHHHHHHHHTTTEEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCeEEEeC
Confidence 68899999999999999999998899999999999999743
No 414
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=88.14 E-value=7.5 Score=35.25 Aligned_cols=136 Identities=11% Similarity=0.042 Sum_probs=67.9
Q ss_pred ccceeeecCCccccCCCHHHHHHHHHcCCcEEEecccccchhhh--cCCCCCCCChHHHHHHHhh------cCcceEeec
Q 037779 28 VGLAQMLRGGVIMDVVTPEQARIAEEAGACAVMALERVPADIRA--QGGVARMSDPQLIKQIKSS------VTIPVMAKA 99 (310)
Q Consensus 28 ~~~~~~l~~g~i~~~~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~--~~G~~~~~~~~~i~~i~~~------~~lPv~~kd 99 (310)
.|+..=+.-|.-....-.+.++.+.++|+.++ .++......++ ..|..+.+..+.+.+|+.. .+.++++.-
T Consensus 89 ~PviaD~d~Gyg~~~~v~~~v~~l~~aGaagv-~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~A 167 (307)
T 3lye_A 89 PPLIADMDTGYGGPIMVARTVEHYIRSGVAGA-HLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLIA 167 (307)
T ss_dssp CCEEEECTTCSSSHHHHHHHHHHHHHTTCCEE-EECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred CcEEEECCCCCCCHHHHHHHHHHHHHcCCeEE-EEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 45555555553111001366899999999998 46411111111 1122223333444555332 245666654
Q ss_pred cccc---------hHHHHHHHHcCCCeeeecCCCChhHHHHHHHhcCCCCcEEee----cCCHH-HHHHHHHhCCCEEEE
Q 037779 100 RIGH---------FVEAQILEAIGVDYVDESEVLTPADEENHINKHNFRVPFVCG----CRNLG-ESLRRIREGAAMIRT 165 (310)
Q Consensus 100 ~i~~---------~~~~~~~~~aGad~v~~~~~~~~~~~~~~~~~~~~~l~v~~~----v~t~~-ea~~a~~~Gad~I~v 165 (310)
+.+. .+.++.+.++|||.|......++.++.+..+... ++++.+. -.++. ......++|.+.|..
T Consensus 168 RTDa~~~~gldeAi~Ra~ay~eAGAD~ifi~~~~~~~~~~~i~~~~~-~~Pv~~n~~~~g~~p~~t~~eL~~lGv~~v~~ 246 (307)
T 3lye_A 168 RTDALQSLGYEECIERLRAARDEGADVGLLEGFRSKEQAAAAVAALA-PWPLLLNSVENGHSPLITVEEAKAMGFRIMIF 246 (307)
T ss_dssp EECCHHHHCHHHHHHHHHHHHHTTCSEEEECCCSCHHHHHHHHHHHT-TSCBEEEEETTSSSCCCCHHHHHHHTCSEEEE
T ss_pred echhhhccCHHHHHHHHHHHHHCCCCEEEecCCCCHHHHHHHHHHcc-CCceeEEeecCCCCCCCCHHHHHHcCCeEEEE
Confidence 4431 2456778889999998655545556555554432 2444332 11110 133455679988754
No 415
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=88.04 E-value=2.3 Score=38.36 Aligned_cols=62 Identities=13% Similarity=0.152 Sum_probs=37.2
Q ss_pred HHHHHHHhc--CCCCEEEEccCCCCCHHHH---HHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHH
Q 037779 211 DLVMQTKQL--GRLPVVHFAAGGVATPADA---AMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVT 273 (310)
Q Consensus 211 ~l~~~i~~~--~~iPVv~ia~GGI~t~~di---~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~ 273 (310)
++++.+.+. .++||++ -.|+.++.+.+ +.+.++|||++++..-.|..++.....+-|....+
T Consensus 68 ~v~~~~~~~~~grvpVia-Gvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~ 134 (303)
T 2wkj_A 68 QVLEIVAEEAKGKIKLIA-HVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIID 134 (303)
T ss_dssp HHHHHHHHHHTTTSEEEE-ECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCcEEE-ecCCCCHHHHHHHHHHHHhCCCCEEEecCCCCCCCCHHHHHHHHHHHHH
Confidence 344444432 4789963 34554434433 33345799999999999987776655544444333
No 416
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=87.86 E-value=2.3 Score=38.16 Aligned_cols=62 Identities=5% Similarity=-0.056 Sum_probs=37.9
Q ss_pred HHHHHHHhc--CCCCEEEEccCCCCCHHHHH---HHHHcCCCEEEEccccccC-CCHHHHHHHHHHHHH
Q 037779 211 DLVMQTKQL--GRLPVVHFAAGGVATPADAA---MMMQLGCDGVFVGSGVFKS-GDPVRRARAIVQAVT 273 (310)
Q Consensus 211 ~l~~~i~~~--~~iPVv~ia~GGI~t~~di~---~~~~~GadgV~VGsai~~~-~dp~~~~~~~~~~~~ 273 (310)
++++.+.+. .++||+ +-.|+.++.+.+. .+.++|||++++..-.|.. ++.....+-|....+
T Consensus 60 ~v~~~~~~~~~gr~pvi-aGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~ 127 (294)
T 3b4u_A 60 AILSSFIAAGIAPSRIV-TGVLVDSIEDAADQSAEALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFS 127 (294)
T ss_dssp HHHHHHHHTTCCGGGEE-EEECCSSHHHHHHHHHHHHHTTCSEEEECCCCSSCSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCcEE-EeCCCccHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHH
Confidence 445555443 368986 3455554444333 3345799999999999987 676555544444333
No 417
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=87.75 E-value=3.7 Score=36.21 Aligned_cols=111 Identities=16% Similarity=0.216 Sum_probs=57.0
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChH----HHHHHHhhc-CcceEeeccc----c----chHHH----H
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQ----LIKQIKSSV-TIPVMAKARI----G----HFVEA----Q 108 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~----~i~~i~~~~-~lPv~~kd~i----~----~~~~~----~ 108 (310)
+.++.+...|+|.| -+| ...+.. ..+.+ .+..++... ++|++.-.+- | ..+.+ .
T Consensus 36 ~~a~~~~~~~aD~v-ElR-----~D~l~~---~~~~~~v~~~l~~lr~~~~~lPiI~T~Rt~~EGG~~~~~~~~~~~ll~ 106 (258)
T 4h3d_A 36 KEAKELKDACLDII-EWR-----VDFFEN---VENIKEVKEVLYELRSYIHDIPLLFTFRSVVEGGEKLISRDYYTTLNK 106 (258)
T ss_dssp HHHHHHTTSSCSEE-EEE-----GGGCTT---TTCHHHHHHHHHHHHHHCTTSCEEEECCCGGGTCSCCCCHHHHHHHHH
T ss_pred HHHHHHhhcCCCEE-EEe-----eccccc---cCCHHHHHHHHHHHHHhcCCCCEEEEEechhhCCCCCCCHHHHHHHHH
Confidence 45777788899987 442 112211 11223 345556554 6999874322 1 11222 2
Q ss_pred HHHHcC-CCeeeecCCCChhHHHHHH-Hh-cCCCCcEEeecCCH------HHH----HHHHHhCCCEEEEe
Q 037779 109 ILEAIG-VDYVDESEVLTPADEENHI-NK-HNFRVPFVCGCRNL------GES----LRRIREGAAMIRTK 166 (310)
Q Consensus 109 ~~~~aG-ad~v~~~~~~~~~~~~~~~-~~-~~~~l~v~~~v~t~------~ea----~~a~~~Gad~I~v~ 166 (310)
.+...| +|+|.+--. .+.+..+.+ .. +..+..++++.|++ +|. .+..+.|||++++-
T Consensus 107 ~~~~~~~~d~iDvEl~-~~~~~~~~l~~~a~~~~~kiI~S~Hdf~~TP~~~el~~~~~~~~~~gaDIvKia 176 (258)
T 4h3d_A 107 EISNTGLVDLIDVELF-MGDEVIDEVVNFAHKKEVKVIISNHDFNKTPKKEEIVSRLCRMQELGADLPKIA 176 (258)
T ss_dssp HHHHTTCCSEEEEEGG-GCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHhcCCchhhHHhhh-ccHHHHHHHHHHHHhCCCEEEEEEecCCCCCCHHHHHHHHHHHHHhCCCEEEEE
Confidence 333345 899873211 223333322 21 23457777777742 232 34456799998875
No 418
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=87.67 E-value=1.4 Score=38.06 Aligned_cols=65 Identities=28% Similarity=0.249 Sum_probs=48.6
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhc--CcceEeeccccchHHHHHHHHcCCCee
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSV--TIPVMAKARIGHFVEAQILEAIGVDYV 118 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~--~lPv~~kd~i~~~~~~~~~~~aGad~v 118 (310)
.+.++.+.++|+++| ..+ + ....+|. +.+.++.+++.+ ++||+....+.+.+++..+.++||+.|
T Consensus 135 ~~~a~~a~eaGad~I-~ts---t-g~~~gga----~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~aGA~~i 201 (225)
T 1mzh_A 135 KKAVEICIEAGADFI-KTS---T-GFAPRGT----TLEEVRLIKSSAKGRIKVKASGGIRDLETAISMIEAGADRI 201 (225)
T ss_dssp HHHHHHHHHHTCSEE-ECC---C-SCSSSCC----CHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHhCCCEE-EEC---C-CCCCCCC----CHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHHhCchHH
Confidence 467999999999998 221 2 1111232 478899998887 799999988887778877778999976
No 419
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=87.43 E-value=1.3 Score=41.63 Aligned_cols=62 Identities=23% Similarity=0.349 Sum_probs=44.0
Q ss_pred cHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccc----cccCCCHHHHHHHHHHHHH
Q 037779 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSG----VFKSGDPVRRARAIVQAVT 273 (310)
Q Consensus 209 ~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsa----i~~~~dp~~~~~~~~~~~~ 273 (310)
.++.++.+++..++||++ .|+.+++++..+.++|+|+|.|+.. +....-....+.++.+.+.
T Consensus 240 ~~~~i~~lr~~~~~Pviv---Kgv~~~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~ 305 (392)
T 2nzl_A 240 SWEDIKWLRRLTSLPIVA---KGILRGDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVE 305 (392)
T ss_dssp CHHHHHHHC--CCSCEEE---EEECCHHHHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhCCCEEE---EecCCHHHHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcC
Confidence 578888898877899963 5778999999999999999999432 2333334556666666653
No 420
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=87.36 E-value=2.1 Score=37.37 Aligned_cols=111 Identities=12% Similarity=0.120 Sum_probs=55.4
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHH----HHHHHhhc-CcceEeeccc--------cchHHH-HHH-
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQL----IKQIKSSV-TIPVMAKARI--------GHFVEA-QIL- 110 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~----i~~i~~~~-~lPv~~kd~i--------~~~~~~-~~~- 110 (310)
+.++.+.+.|+|.+ -++ ...+.. .+.+. +..+|+.. ++|++.-.+- +..+.+ +.+
T Consensus 21 ~~~~~~~~~~~D~v-ElR-----vD~l~~----~~~~~v~~~~~~lr~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~ 90 (238)
T 1sfl_A 21 IQKINHRIDAIDVL-ELR-----IDQFEN----VTVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFTNDSYLNLIS 90 (238)
T ss_dssp HHHHHHTTTTCSEE-EEE-----CTTSTT----CCHHHHHHHHHHHC---CCSEEEEECCBGGGTSCBCCCHHHHHHHHH
T ss_pred HHHHHhhhcCCCEE-EEE-----eccccc----CCHHHHHHHHHHHHHhccCCCEEEEeeccccCCCCCCCHHHHHHHHH
Confidence 55777778899987 442 112211 01333 34566655 7899874321 122222 222
Q ss_pred --HHc-CCCeeeecCCC-ChhHHHHHH-Hh-cCCCCcEEeecCC----H--HHH----HHHHHhCCCEEEEe
Q 037779 111 --EAI-GVDYVDESEVL-TPADEENHI-NK-HNFRVPFVCGCRN----L--GES----LRRIREGAAMIRTK 166 (310)
Q Consensus 111 --~~a-Gad~v~~~~~~-~~~~~~~~~-~~-~~~~l~v~~~v~t----~--~ea----~~a~~~Gad~I~v~ 166 (310)
.+. ++|+|.+.-.. .+.+..+.+ .. +..+..++++-|+ + ++. .++.+.|||++++-
T Consensus 91 ~~~~~~~~d~iDvEl~~~~~~~~~~~l~~~~~~~~~kvI~S~Hdf~~tp~~~el~~~~~~~~~~gaDivKia 162 (238)
T 1sfl_A 91 DLANINGIDMIDIEWQADIDIEKHQRIITHLQQYNKEVIISHHNFESTPPLDELQFIFFKMQKFNPEYVKLA 162 (238)
T ss_dssp HGGGCTTCCEEEEECCTTSCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHTTCCSEEEEE
T ss_pred HHHHhCCCCEEEEEccCCCChHHHHHHHHHHHhcCCEEEEEecCCCCCcCHHHHHHHHHHHHHcCCCEEEEE
Confidence 334 68998743222 033333222 22 2345777777764 3 343 34446899999875
No 421
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=87.35 E-value=1.2 Score=41.19 Aligned_cols=88 Identities=10% Similarity=0.015 Sum_probs=58.6
Q ss_pred ccceeeecCCccccCCCHHHHHHHHHcCCcEEEecccccc-------hh--------hhcC---CCC-CCCChHHHHHHH
Q 037779 28 VGLAQMLRGGVIMDVVTPEQARIAEEAGACAVMALERVPA-------DI--------RAQG---GVA-RMSDPQLIKQIK 88 (310)
Q Consensus 28 ~~~~~~l~~g~i~~~~~~~~a~~~~~~Ga~~I~~l~~~~~-------d~--------r~~~---G~~-~~~~~~~i~~i~ 88 (310)
.|+..+|+-+. ...++++.++++|+++|..+|..+| +. ..++ |.. .....+.+++++
T Consensus 194 ~PV~vKi~p~~----~~~~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~ 269 (345)
T 3oix_A 194 KPLGIKLPPYF----DIVHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFY 269 (345)
T ss_dssp SCEEEEECCCC----CHHHHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHH
T ss_pred CCeEEEECCCC----CHHHHHHHHHHhCCCceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHH
Confidence 57777777641 3367899999999987743331110 00 0111 111 011146788999
Q ss_pred hhc--CcceEeeccccchHHHHHHHHcCCCeee
Q 037779 89 SSV--TIPVMAKARIGHFVEAQILEAIGVDYVD 119 (310)
Q Consensus 89 ~~~--~lPv~~kd~i~~~~~~~~~~~aGad~v~ 119 (310)
+.+ ++||+....|.+.+++..+..+|||.|.
T Consensus 270 ~~~~~~ipIIg~GGI~s~~da~~~l~aGAd~V~ 302 (345)
T 3oix_A 270 KRLNPSIQIIGTGGVXTGRDAFEHILCGASMVQ 302 (345)
T ss_dssp TTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEE
T ss_pred HHcCCCCcEEEECCCCChHHHHHHHHhCCCEEE
Confidence 988 7999999999887888777889999986
No 422
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=87.23 E-value=15 Score=32.49 Aligned_cols=66 Identities=11% Similarity=0.037 Sum_probs=37.3
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhc-CcceEeeccccc----hHHHHHHHHcCCCeee
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSV-TIPVMAKARIGH----FVEAQILEAIGVDYVD 119 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~-~lPv~~kd~i~~----~~~~~~~~~aGad~v~ 119 (310)
+.++.+.+. ++++..+. ..+-+..+...+..+-++..+ ++||++...-.. .+.++.+.++|||+++
T Consensus 23 ~lv~~li~~-v~gl~v~G-------ttGE~~~Ls~~Er~~v~~~~~~rvpviaGvg~~~t~~ai~la~~A~~~Gadavl 93 (283)
T 2pcq_A 23 ELAQALEPL-VDGLLVYG-------SNGEGVHLTPEERARGLRALRPRKPFLVGLMEETLPQAEGALLEAKAAGAMALL 93 (283)
T ss_dssp HHHHHHGGG-SSCCEETC-------TTTTGGGSCHHHHHHHHHTCCCSSCCEEEECCSSHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHhh-CCEEEECC-------cCcCchhcCHHHHHHHHHHHHhCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 668888888 99874431 011111232233333333222 799988755432 2455677789999987
No 423
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=87.22 E-value=2.5 Score=37.03 Aligned_cols=75 Identities=13% Similarity=0.050 Sum_probs=51.1
Q ss_pred cCCCHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhh--cCcceEeeccccchHHHHHHHHcCCCee
Q 037779 41 DVVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSS--VTIPVMAKARIGHFVEAQILEAIGVDYV 118 (310)
Q Consensus 41 ~~~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~--~~lPv~~kd~i~~~~~~~~~~~aGad~v 118 (310)
++.+++.++.+.+.|++.|..-...||.-+.. . ....++.++++++. .++|+++-..|. .+.+..+.++||++|
T Consensus 141 S~ht~~Ea~~A~~~GaDyI~vgpvf~T~tK~~--~-~~~gl~~l~~~~~~~~~~iPvvAiGGI~-~~ni~~~~~aGa~gv 216 (243)
T 3o63_A 141 STHDPDQVAAAAAGDADYFCVGPCWPTPTKPG--R-AAPGLGLVRVAAELGGDDKPWFAIGGIN-AQRLPAVLDAGARRI 216 (243)
T ss_dssp EECSHHHHHHHHHSSCSEEEECCSSCCCC--------CCCHHHHHHHHTC---CCCEEEESSCC-TTTHHHHHHTTCCCE
T ss_pred eCCCHHHHHHHhhCCCCEEEEcCccCCCCCCC--c-chhhHHHHHHHHHhccCCCCEEEecCCC-HHHHHHHHHcCCCEE
Confidence 56778888888889999984322233322211 0 12347888998876 589999988884 456778899999998
Q ss_pred e
Q 037779 119 D 119 (310)
Q Consensus 119 ~ 119 (310)
.
T Consensus 217 a 217 (243)
T 3o63_A 217 V 217 (243)
T ss_dssp E
T ss_pred E
Confidence 7
No 424
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=87.11 E-value=1.2 Score=41.35 Aligned_cols=72 Identities=17% Similarity=0.116 Sum_probs=50.0
Q ss_pred HHHHHHHHcCCcEEEecccc-cchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHHHHHHcC-CCeee
Q 037779 46 EQARIAEEAGACAVMALERV-PADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIG-VDYVD 119 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~-~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aG-ad~v~ 119 (310)
++++.++++|++.|.+.+.. ........+. ..+.+.++.+++.+++||+....+.+.+.++.+.+.| ||.|.
T Consensus 250 ~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~--~~~~~~~~~ir~~~~iPVi~~GgI~s~e~a~~~l~~G~aD~V~ 323 (363)
T 3l5l_A 250 ELARRFKAGGLDLLSVSVGFTIPDTNIPWGP--AFMGPIAERVRREAKLPVTSAWGFGTPQLAEAALQANQLDLVS 323 (363)
T ss_dssp HHHHHHHHTTCCEEEEEECCCSSCCCCCCCT--TTTHHHHHHHHHHHTCCEEECSSTTSHHHHHHHHHTTSCSEEE
T ss_pred HHHHHHHHcCCCEEEEecCccccccccCCCc--chhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHCCCccEEE
Confidence 67999999999998544210 0000000010 1136778999999999999998887777888888888 99987
No 425
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=87.00 E-value=9.3 Score=33.94 Aligned_cols=109 Identities=16% Similarity=0.145 Sum_probs=63.8
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceE-eeccccchHHHHHHHHcCCCeeee-c-
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVM-AKARIGHFVEAQILEAIGVDYVDE-S- 121 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~-~kd~i~~~~~~~~~~~aGad~v~~-~- 121 (310)
.++++.+.++|++++... ..|.+. .+.+.+..+..++.++ .-......+.++.+.+.+.++|-. +
T Consensus 115 ~~f~~~~~~aGvdGvIip-Dlp~ee-----------~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~~~gfiY~vs~ 182 (271)
T 3nav_A 115 DDFYQRCQKAGVDSVLIA-DVPTNE-----------SQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQLGKGYTYLLSR 182 (271)
T ss_dssp HHHHHHHHHHTCCEEEET-TSCGGG-----------CHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHHCCSCEEECCC
T ss_pred HHHHHHHHHCCCCEEEEC-CCCHHH-----------HHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHHCCCeEEEEec
Confidence 468999999999997432 222211 3344554455555322 111112235666666666666541 1
Q ss_pred ------C-CCC--hhHHHHHHHhcCCCCcEEe--ecCCHHHHHHHHHhCCCEEEEe
Q 037779 122 ------E-VLT--PADEENHINKHNFRVPFVC--GCRNLGESLRRIREGAAMIRTK 166 (310)
Q Consensus 122 ------~-~~~--~~~~~~~~~~~~~~l~v~~--~v~t~~ea~~a~~~Gad~I~v~ 166 (310)
. ..+ ..++++.++++. ++++.+ +++|++++..+...|||.+.+.
T Consensus 183 ~GvTG~~~~~~~~~~~~v~~vr~~~-~~Pv~vGfGIst~e~~~~~~~~gADgvIVG 237 (271)
T 3nav_A 183 AGVTGAETKANMPVHALLERLQQFD-APPALLGFGISEPAQVKQAIEAGAAGAISG 237 (271)
T ss_dssp C--------CCHHHHHHHHHHHHTT-CCCEEECSSCCSHHHHHHHHHTTCSEEEES
T ss_pred cCCCCcccCCchhHHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 1 111 234556665532 566666 5899999998999999998884
No 426
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=86.75 E-value=6.2 Score=35.37 Aligned_cols=127 Identities=15% Similarity=0.079 Sum_probs=74.3
Q ss_pred hHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeee-ec------------CCCChhHHHHHHHhcCCCCcEEeecC
Q 037779 81 PQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVD-ES------------EVLTPADEENHINKHNFRVPFVCGCR 147 (310)
Q Consensus 81 ~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~-~~------------~~~~~~~~~~~~~~~~~~l~v~~~v~ 147 (310)
....+.+.+...-++++. ....+.++.+.++||+.|+ .. ..+...+.++.+.+. .++++++...
T Consensus 10 ~~~~~~~~~~~~~g~i~~--~~~~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~-~~iPv~~k~r 86 (305)
T 2nv1_A 10 ERVKRGMAEMQKGGVIMD--VINAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNA-VSIPVMAKAR 86 (305)
T ss_dssp HHHHHHHHHTTTTCEEEE--ESSHHHHHHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHH-CSSCEEEEEC
T ss_pred HHHHHHHHHHccCCeeec--CCHHHHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHh-CCCCEEeccc
Confidence 333444555555566653 2334677888999999994 21 011234455555442 4678777766
Q ss_pred C--HHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEE
Q 037779 148 N--LGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVV 225 (310)
Q Consensus 148 t--~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv 225 (310)
. .+++..+.+.|+|.|... ...++. ++ .+++. .....++++
T Consensus 87 ~g~~~~~~~~~a~GAd~V~~~-~~l~~~-------------------------------~~---~~~i~--~~~~g~~v~ 129 (305)
T 2nv1_A 87 IGHIVEARVLEAMGVDYIDES-EVLTPA-------------------------------DE---EFHLN--KNEYTVPFV 129 (305)
T ss_dssp TTCHHHHHHHHHHTCSEEEEC-TTSCCS-------------------------------CS---SCCCC--GGGCSSCEE
T ss_pred ccchHHHHHHHHCCCCEEEEe-ccCCHH-------------------------------HH---HHHHH--HhccCCcEE
Confidence 6 788888888999998522 111110 00 00000 011235663
Q ss_pred EEccCCCCCHHHHHHHHHcCCCEEEE
Q 037779 226 HFAAGGVATPADAAMMMQLGCDGVFV 251 (310)
Q Consensus 226 ~ia~GGI~t~~di~~~~~~GadgV~V 251 (310)
-++.+++++.+..+.|+|.|.+
T Consensus 130 ----~~~~~~~e~~~a~~~Gad~V~~ 151 (305)
T 2nv1_A 130 ----CGCRDLGEATRRIAEGASMLRT 151 (305)
T ss_dssp ----EEESSHHHHHHHHHTTCSEEEE
T ss_pred ----EEeCCHHHHHHHHHCCCCEEEe
Confidence 3556888998888999999988
No 427
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=86.74 E-value=0.9 Score=42.52 Aligned_cols=68 Identities=12% Similarity=-0.156 Sum_probs=48.3
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHHHHHHcC-CCeeee
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIG-VDYVDE 120 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aG-ad~v~~ 120 (310)
++++.++++|+++|.+.++.- .. ...+ .+.+.++.+++.+++||+....+ +.+.++.+.+.| ||.|..
T Consensus 259 ~la~~le~~Gvd~i~v~~~~~-~~-~~~~----~~~~~~~~ik~~~~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~i 327 (377)
T 2r14_A 259 YLAGELDRRGLAYLHFNEPDW-IG-GDIT----YPEGFREQMRQRFKGGLIYCGNY-DAGRAQARLDDNTADAVAF 327 (377)
T ss_dssp HHHHHHHHTTCSEEEEECCC--------C----CCTTHHHHHHHHCCSEEEEESSC-CHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHcCCCEEEEeCCcc-cC-CCCc----chHHHHHHHHHHCCCCEEEECCC-CHHHHHHHHHCCCceEEee
Confidence 679999999999985542110 00 0111 13678899999999999998888 467787777777 999873
No 428
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=86.65 E-value=2.4 Score=38.64 Aligned_cols=85 Identities=16% Similarity=0.164 Sum_probs=48.7
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCC-------CCChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCee
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVAR-------MSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYV 118 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~-------~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v 118 (310)
+.|+.+.+.||+.| +++...|.+ |+.. ..-...|+.+++.+++|+++-.+ +.+-++.+.++||+.|
T Consensus 37 ~~a~~~v~~GAdII-DIGgeSTrP----Ga~~v~~~eE~~Rv~pvI~~l~~~~~vpiSIDT~--~~~Va~aAl~aGa~iI 109 (314)
T 2vef_A 37 QQARKLIAEGASML-DIGGESTRP----GSSYVEIEEEIQRVVPVIKAIRKESDVLISIDTW--KSQVAEAALAAGADLV 109 (314)
T ss_dssp HHHHHHHHTTCSEE-EEECCC---------CHHHHHHHHHHHHHHHHHHHHHCCCEEEEECS--CHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHCCCCEE-EECCCcCCC----CCCCCCHHHHHHHHHHHHHHHHhhCCceEEEeCC--CHHHHHHHHHcCCCEE
Confidence 66899999999998 664211111 1000 00023345566667899987655 3366788888999999
Q ss_pred e-ecCCCChhHHHHHHHhcC
Q 037779 119 D-ESEVLTPADEENHINKHN 137 (310)
Q Consensus 119 ~-~~~~~~~~~~~~~~~~~~ 137 (310)
- ++.....++....+.+++
T Consensus 110 NDVsg~~~d~~m~~v~a~~~ 129 (314)
T 2vef_A 110 NDITGLMGDEKMPHVVAEAR 129 (314)
T ss_dssp EETTTTCSCTTHHHHHHHHT
T ss_pred EECCCCCCChHHHHHHHHcC
Confidence 7 333211234555554443
No 429
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=86.65 E-value=1.5 Score=42.66 Aligned_cols=62 Identities=19% Similarity=0.317 Sum_probs=46.7
Q ss_pred cHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEc----cccccCCCHHHHHHHHHHHHH
Q 037779 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVG----SGVFKSGDPVRRARAIVQAVT 273 (310)
Q Consensus 209 ~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VG----sai~~~~dp~~~~~~~~~~~~ 273 (310)
.++.++.+++..++||++ -|+.+++++..+.++|+|+|.|+ +.+....-....+.++.+.+.
T Consensus 331 ~~~~i~~lr~~~~~Pviv---Kgv~~~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~ 396 (511)
T 1kbi_A 331 TWKDIEELKKKTKLPIVI---KGVQRTEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILE 396 (511)
T ss_dssp CHHHHHHHHHHCSSCEEE---EEECSHHHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCcEEE---EeCCCHHHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHH
Confidence 578889998877899963 57778999999999999999994 333333344566677777774
No 430
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=86.62 E-value=1.4 Score=39.78 Aligned_cols=63 Identities=17% Similarity=0.226 Sum_probs=40.3
Q ss_pred HHHHHHHhc--CCCCEEEEccCCCCCHHHHH---HHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHc
Q 037779 211 DLVMQTKQL--GRLPVVHFAAGGVATPADAA---MMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTN 274 (310)
Q Consensus 211 ~l~~~i~~~--~~iPVv~ia~GGI~t~~di~---~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~ 274 (310)
++++.+.+. .++||++ -.|+.++.+.+. .+.++|||++++..-.|..++.....+-|....++
T Consensus 61 ~v~~~~~~~~~grvpvia-Gvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a 128 (300)
T 3eb2_A 61 AVVRATIEAAQRRVPVVA-GVASTSVADAVAQAKLYEKLGADGILAILEAYFPLKDAQIESYFRAIADA 128 (300)
T ss_dssp HHHHHHHHHHTTSSCBEE-EEEESSHHHHHHHHHHHHHHTCSEEEEEECCSSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCcEEE-eCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHH
Confidence 344444442 4789963 445554444433 44467999999999999888877666666555554
No 431
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=86.61 E-value=7.2 Score=35.53 Aligned_cols=135 Identities=15% Similarity=0.019 Sum_probs=67.7
Q ss_pred ccceeeecCCccccCCC-HHHHHHHHHcCCcEEEecccccchhh--hcCCCCCCCChHHHHHHHhhc----CcceEeecc
Q 037779 28 VGLAQMLRGGVIMDVVT-PEQARIAEEAGACAVMALERVPADIR--AQGGVARMSDPQLIKQIKSSV----TIPVMAKAR 100 (310)
Q Consensus 28 ~~~~~~l~~g~i~~~~~-~~~a~~~~~~Ga~~I~~l~~~~~d~r--~~~G~~~~~~~~~i~~i~~~~----~lPv~~kd~ 100 (310)
.|+..=+.-|. -...+ .+.++.++++|+.++ .++......+ +.+|..+.+..+.+.+|+..+ +-++.+..+
T Consensus 102 ~PviaD~d~Gy-g~~~~v~~tv~~l~~aGaagv-~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~AR 179 (318)
T 1zlp_A 102 LCVVVDGDTGG-GGPLNVQRFIRELISAGAKGV-FLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVAR 179 (318)
T ss_dssp SEEEEECTTCS-SSHHHHHHHHHHHHHTTCCEE-EEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEE
T ss_pred CCEEEeCCCCC-CCHHHHHHHHHHHHHcCCcEE-EECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEe
Confidence 35555555552 11111 367999999999998 4541110011 112222333334444544332 233444433
Q ss_pred ccc---------hHHHHHHHHcCCCeeeecCCCChhHHHHHHHhcCCCCcEEeecC----C-HHHHHHHHHhCCCEEEEe
Q 037779 101 IGH---------FVEAQILEAIGVDYVDESEVLTPADEENHINKHNFRVPFVCGCR----N-LGESLRRIREGAAMIRTK 166 (310)
Q Consensus 101 i~~---------~~~~~~~~~aGad~v~~~~~~~~~~~~~~~~~~~~~l~v~~~v~----t-~~ea~~a~~~Gad~I~v~ 166 (310)
... .+.++.+.++|||.|......+++++.+.... ..+++++.+. + .-......++|...+...
T Consensus 180 tda~a~~gl~~ai~Ra~Ay~eAGAd~i~~e~~~~~e~~~~i~~~--l~~P~lan~~~~g~~~~~~~~eL~~lGv~~v~~~ 257 (318)
T 1zlp_A 180 TDARAPHGLEEGIRRANLYKEAGADATFVEAPANVDELKEVSAK--TKGLRIANMIEGGKTPLHTPEEFKEMGFHLIAHS 257 (318)
T ss_dssp ECTHHHHHHHHHHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHH--SCSEEEEEECTTSSSCCCCHHHHHHHTCCEEEEC
T ss_pred eHHhhhcCHHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHh--cCCCEEEEeccCCCCCCCCHHHHHHcCCeEEEEc
Confidence 321 24567888899999985444333444444443 3466654322 1 112345556798887763
No 432
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=86.54 E-value=4.7 Score=36.48 Aligned_cols=63 Identities=19% Similarity=0.100 Sum_probs=37.4
Q ss_pred HHHHHHHhc--CCCCEEEEccCCCCCHHHHH---HHHHcCCCEEEEccccc---cCCCHHHHHHHHHHHHHc
Q 037779 211 DLVMQTKQL--GRLPVVHFAAGGVATPADAA---MMMQLGCDGVFVGSGVF---KSGDPVRRARAIVQAVTN 274 (310)
Q Consensus 211 ~l~~~i~~~--~~iPVv~ia~GGI~t~~di~---~~~~~GadgV~VGsai~---~~~dp~~~~~~~~~~~~~ 274 (310)
++++.+.+. .++||++ -.|+.++.+.+. .+.++|||++++..-.| ..++.....+-|....++
T Consensus 65 ~v~~~~~~~~~grvpvia-Gvg~~~t~~ai~la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a 135 (309)
T 3fkr_A 65 VLTRTILEHVAGRVPVIV-TTSHYSTQVCAARSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDA 135 (309)
T ss_dssp HHHHHHHHHHTTSSCEEE-ECCCSSHHHHHHHHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCcEEE-ecCCchHHHHHHHHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHh
Confidence 344444442 4799952 345555444433 44467999999999987 345655555555554444
No 433
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=85.92 E-value=16 Score=32.86 Aligned_cols=81 Identities=16% Similarity=0.103 Sum_probs=49.0
Q ss_pred HHHHHHHHcCCCeeee-cCC-------CC----hhHHHHHHHh-cCCCCcEEeecCCHHHHHHHHHhCCCEE-EEecCCC
Q 037779 105 VEAQILEAIGVDYVDE-SEV-------LT----PADEENHINK-HNFRVPFVCGCRNLGESLRRIREGAAMI-RTKGEAG 170 (310)
Q Consensus 105 ~~~~~~~~aGad~v~~-~~~-------~~----~~~~~~~~~~-~~~~l~v~~~v~t~~ea~~a~~~Gad~I-~v~g~~~ 170 (310)
+.++...+.|||.|.+ ... .+ ...+...++. ...++++.+++.+++.++.+++.|+++| -++|.
T Consensus 56 ~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~~vpiSIDT~~~~Va~aAl~aGa~iINdVsg~-- 133 (294)
T 2dqw_A 56 ERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSLGVPVSVDTRKPEVAEEALKLGAHLLNDVTGL-- 133 (294)
T ss_dssp HHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTTCSCEEEECSCHHHHHHHHHHTCSEEECSSCS--
T ss_pred HHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHhCCCEEEECCCC--
Confidence 4566777899999872 111 11 1223333333 2127899999999999999999999987 34432
Q ss_pred CCchHHHHHHHHHhhccee
Q 037779 171 TGNIVEAVRHVRSVMGDIR 189 (310)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~ 189 (310)
...+.++.+++++..+.
T Consensus 134 --~d~~m~~v~a~~~~~vV 150 (294)
T 2dqw_A 134 --RDERMVALAARHGVAAV 150 (294)
T ss_dssp --CCHHHHHHHHHHTCEEE
T ss_pred --CChHHHHHHHHhCCCEE
Confidence 22344555555554433
No 434
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=85.89 E-value=16 Score=33.61 Aligned_cols=47 Identities=11% Similarity=0.060 Sum_probs=38.2
Q ss_pred cHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcC-CCEEEEcccccc
Q 037779 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVFK 257 (310)
Q Consensus 209 ~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~G-adgV~VGsai~~ 257 (310)
+++..+.+++..++|| ++.+.+.+++++.++++.| +|.|.+--.-+.
T Consensus 225 ~~~~~~~l~~~~~iPI--~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~G 272 (379)
T 2rdx_A 225 SYEECQQVRRVADQPM--KLDECVTGLHMAQRIVADRGAEICCLKISNLG 272 (379)
T ss_dssp SHHHHHHHHTTCCSCE--EECTTCCSHHHHHHHHHHTCCSEEEEETTTTT
T ss_pred CHHHHHHHHhhCCCCE--EEeCCcCCHHHHHHHHHcCCCCEEEEeccccC
Confidence 6777788888778999 5689999999999999864 899998665544
No 435
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=85.85 E-value=1.4 Score=37.47 Aligned_cols=75 Identities=24% Similarity=0.259 Sum_probs=48.9
Q ss_pred cCCCHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeee
Q 037779 41 DVVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVD 119 (310)
Q Consensus 41 ~~~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~ 119 (310)
.+.+++.++.+.+.|++.|..-+..++. .+.|. ....++.++++++..++|+++-..+ +.+.+..+.++|+++|.
T Consensus 116 sv~t~~~~~~a~~~gaD~i~~~~~f~~~--~~~g~-~~~~~~~l~~~~~~~~~pvia~GGI-~~~nv~~~~~~Ga~gv~ 190 (221)
T 1yad_A 116 SVHSLEEAVQAEKEDADYVLFGHVFETD--CKKGL-EGRGVSLLSDIKQRISIPVIAIGGM-TPDRLRDVKQAGADGIA 190 (221)
T ss_dssp EECSHHHHHHHHHTTCSEEEEECCC-------------CHHHHHHHHHHHCCSCEEEESSC-CGGGHHHHHHTTCSEEE
T ss_pred EcCCHHHHHHHHhCCCCEEEECCccccC--CCCCC-CCCCHHHHHHHHHhCCCCEEEECCC-CHHHHHHHHHcCCCEEE
Confidence 3456788888999999998432111111 11111 0123677888888789999998888 44667777889999987
No 436
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=85.83 E-value=20 Score=32.40 Aligned_cols=67 Identities=18% Similarity=0.223 Sum_probs=40.3
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCCh---HHHHHHHhhc--CcceEeeccccc----hHHHHHHHHcCCC
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDP---QLIKQIKSSV--TIPVMAKARIGH----FVEAQILEAIGVD 116 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~---~~i~~i~~~~--~lPv~~kd~i~~----~~~~~~~~~aGad 116 (310)
+.++.+.+.|+++|..+. .|.+ +..+... +.++.+.+.+ .+||++...-.. .+.++.+.++|||
T Consensus 36 ~lv~~li~~Gv~gl~v~G--tTGE-----~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gad 108 (318)
T 3qfe_A 36 RYYAYLARSGLTGLVILG--TNAE-----AFLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAGAN 108 (318)
T ss_dssp HHHHHHHTTTCSEEEESS--GGGT-----GGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHcCCCEEEeCc--cccC-----hhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCC
Confidence 678889999999985441 0100 1112222 2344444444 589998754332 2456677789999
Q ss_pred eee
Q 037779 117 YVD 119 (310)
Q Consensus 117 ~v~ 119 (310)
+++
T Consensus 109 avl 111 (318)
T 3qfe_A 109 YVL 111 (318)
T ss_dssp EEE
T ss_pred EEE
Confidence 988
No 437
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=85.64 E-value=0.99 Score=39.19 Aligned_cols=23 Identities=13% Similarity=-0.012 Sum_probs=16.8
Q ss_pred eecCCHHHHHHHHHhCCCEEEEe
Q 037779 144 CGCRNLGESLRRIREGAAMIRTK 166 (310)
Q Consensus 144 ~~v~t~~ea~~a~~~Gad~I~v~ 166 (310)
+.+.|.+++..|.+.|||=|=..
T Consensus 6 vc~~s~~~a~~A~~~GAdRIELc 28 (224)
T 2bdq_A 6 FCAENLTDLTRLDKAIISRVELC 28 (224)
T ss_dssp EEEETTTTGGGCCTTTCCEEEEE
T ss_pred EEECCHHHHHHHHHcCCCEEEEc
Confidence 34567778888888999877544
No 438
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=85.61 E-value=3.9 Score=40.06 Aligned_cols=76 Identities=8% Similarity=-0.072 Sum_probs=46.3
Q ss_pred cCCCHHHHHHHHHcC---CcEEEecccccchhhhcCCCC-CCCChHHHHHHHhh------cCcceEeeccccchHHHHHH
Q 037779 41 DVVTPEQARIAEEAG---ACAVMALERVPADIRAQGGVA-RMSDPQLIKQIKSS------VTIPVMAKARIGHFVEAQIL 110 (310)
Q Consensus 41 ~~~~~~~a~~~~~~G---a~~I~~l~~~~~d~r~~~G~~-~~~~~~~i~~i~~~------~~lPv~~kd~i~~~~~~~~~ 110 (310)
++.+++.++.+.+.| +|.|..-.-.||.- +.+.. ....++.++++++. .++|+.+-..|.. +.+..+
T Consensus 114 S~ht~eea~~A~~~G~~~aDYv~~Gpvf~T~t--K~~~~~~~~G~~~l~~i~~~~~~~~~~~iPvvAIGGI~~-~ni~~v 190 (540)
T 3nl6_A 114 SVGFPEEVDELSKMGPDMVDYIGVGTLFPTLT--KKNPKKAPMGTAGAIRVLDALERNNAHWCRTVGIGGLHP-DNIERV 190 (540)
T ss_dssp EECSHHHHHHHHHTCC--CCEEEESCCSCCCC--CC----CCCHHHHHHHHHHHHHHTTCTTCEEEEESSCCT-TTHHHH
T ss_pred ECCCHHHHHHHHHcCCCCCCEEEEcCCCCCCC--CCCcCCCCCCHHHHHHHHHHHHhhccCCCCEEEEcCCCH-HHHHHH
Confidence 456788899999999 99984321122211 11100 01126677777665 4899999888853 345555
Q ss_pred HH--------cCCCeee
Q 037779 111 EA--------IGVDYVD 119 (310)
Q Consensus 111 ~~--------aGad~v~ 119 (310)
.+ +|+++|.
T Consensus 191 ~~~~~~~g~~~GadgvA 207 (540)
T 3nl6_A 191 LYQCVSSNGKRSLDGIC 207 (540)
T ss_dssp HHHCBCTTSSCBCSCEE
T ss_pred HHhhcccccccCceEEE
Confidence 54 7899987
No 439
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=85.55 E-value=2.7 Score=35.26 Aligned_cols=68 Identities=21% Similarity=0.193 Sum_probs=47.9
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhc-CcceEeeccccchHHHHHHHHcCCCeee
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSV-TIPVMAKARIGHFVEAQILEAIGVDYVD 119 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~-~lPv~~kd~i~~~~~~~~~~~aGad~v~ 119 (310)
.+.++.+.+.|++.| .+++-.+ ...+. ....+.++++++.. ++|+.+..++. .+.+..+.++|||++.
T Consensus 117 ~~~~~~~~~~g~d~i-~v~~g~~-g~~~~----~~~~~~i~~l~~~~~~~~i~~~gGI~-~~~~~~~~~~Gad~vv 185 (211)
T 3f4w_A 117 PARVRLLEEAGADML-AVHTGTD-QQAAG----RKPIDDLITMLKVRRKARIAVAGGIS-SQTVKDYALLGPDVVI 185 (211)
T ss_dssp HHHHHHHHHHTCCEE-EEECCHH-HHHTT----CCSHHHHHHHHHHCSSCEEEEESSCC-TTTHHHHHTTCCSEEE
T ss_pred HHHHHHHHHcCCCEE-EEcCCCc-ccccC----CCCHHHHHHHHHHcCCCcEEEECCCC-HHHHHHHHHcCCCEEE
Confidence 377899999999987 3321111 11121 12478899999886 89999888775 4677788899999987
No 440
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=85.49 E-value=22 Score=32.58 Aligned_cols=67 Identities=15% Similarity=0.137 Sum_probs=38.3
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHH--HhhcCcceEeeccccc----hHHHHHHHHcCCCeee
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQI--KSSVTIPVMAKARIGH----FVEAQILEAIGVDYVD 119 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i--~~~~~lPv~~kd~i~~----~~~~~~~~~aGad~v~ 119 (310)
+.++.+.+.|+++|..+- .|.+ +..+...+..+-+ ...-++||++...-.. .+.++.+.++|||+++
T Consensus 51 ~lv~~li~~Gv~Gl~v~G--tTGE-----~~~Ls~eEr~~vi~~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavl 123 (344)
T 2hmc_A 51 RKGKELIADGMSAVVYCG--SMGD-----WPLLTDEQRMEGVERLVKAGIPVIVGTGAVNTASAVAHAVHAQKVGAKGLM 123 (344)
T ss_dssp HHHHHHHHTTCCCEEESS--GGGT-----GGGSCHHHHHHHHHHHHHTTCCEEEECCCSSHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHcCCCEEEeCc--cCcC-----hhhCCHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 678888999999985441 0101 1112222222212 2223689988754432 2455677789999998
No 441
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=85.45 E-value=2.1 Score=38.42 Aligned_cols=60 Identities=17% Similarity=0.253 Sum_probs=36.1
Q ss_pred HHHHHHHhc--CCCCEEEEccCCCCCHHHH---HHHHHcCCCEEEEccccccCCCHHHHHHHHHHH
Q 037779 211 DLVMQTKQL--GRLPVVHFAAGGVATPADA---AMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQA 271 (310)
Q Consensus 211 ~l~~~i~~~--~~iPVv~ia~GGI~t~~di---~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~ 271 (310)
++++.+.+. .++||+ +-.|+.++.+.+ +.+.++|||++++..-.|..++.....+-|...
T Consensus 58 ~v~~~~~~~~~gr~pvi-~Gvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~i 122 (291)
T 3a5f_A 58 ETIKFVIDKVNKRIPVI-AGTGSNNTAASIAMSKWAESIGVDGLLVITPYYNKTTQKGLVKHFKAV 122 (291)
T ss_dssp HHHHHHHHHHTTSSCEE-EECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHC-CT
T ss_pred HHHHHHHHHhCCCCcEE-EeCCcccHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHH
Confidence 344444432 468996 344554434333 334467999999999999877765555444443
No 442
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=85.39 E-value=7.2 Score=34.98 Aligned_cols=141 Identities=16% Similarity=0.159 Sum_probs=77.4
Q ss_pred ChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeeeecC-CCChhHHHHHHHhcCCCCcEEeecC---CHHHHHHH
Q 037779 80 DPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVDESE-VLTPADEENHINKHNFRVPFVCGCR---NLGESLRR 155 (310)
Q Consensus 80 ~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~~~~-~~~~~~~~~~~~~~~~~l~v~~~v~---t~~ea~~a 155 (310)
-+..++++++..++|++--.+ +...++.+.+. +|.+-+.+ .....++.+.+.+ .+.++++... |++|.+.+
T Consensus 79 GL~~L~~~~~e~Glp~~Tev~--d~~~v~~l~~~-vd~lqIgA~~~~n~~LLr~va~--~gkPVilK~G~~~t~~ei~~a 153 (285)
T 3sz8_A 79 GLKIFAEVKARFGVPVITDVH--EAEQAAPVAEI-ADVLQVPAFLARQTDLVVAIAK--AGKPVNVKKPQFMSPTQLKHV 153 (285)
T ss_dssp HHHHHHHHHHHHCCCEEEECC--SGGGHHHHHTT-CSEEEECGGGTTCHHHHHHHHH--TSSCEEEECCTTSCGGGTHHH
T ss_pred HHHHHHHHHHhcCCeEEEEeC--CHHHHHHHHHh-CCEEEECccccCCHHHHHHHHc--cCCcEEEeCCCCCCHHHHHHH
Confidence 456677888888999975433 22455666667 88887442 2344456666654 4577777642 55554443
Q ss_pred H----HhCCC-EEEEe-cCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcC-CCCEEEEc
Q 037779 156 I----REGAA-MIRTK-GEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLG-RLPVVHFA 228 (310)
Q Consensus 156 ~----~~Gad-~I~v~-g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~-~iPVv~ia 228 (310)
+ +.|.+ ++-.+ |..|+.+ +...+...+..+++.. .+||+.-+
T Consensus 154 ve~i~~~Gn~~i~L~erg~~y~~~-------------------------------~~~vdl~~i~~lk~~~~~~pV~~D~ 202 (285)
T 3sz8_A 154 VSKCGEVGNDRVMLCERGSSFGYD-------------------------------NLVVDMLGFRQMAETTGGCPVIFDV 202 (285)
T ss_dssp HHHHHHTTCCCEEEEECCEECSSS-------------------------------CEECCTTHHHHHHHHTTSCCEEEET
T ss_pred HHHHHHcCCCcEEEEeCCCCCCCC-------------------------------cCccCHHHHHHHHHhCCCCCEEEeC
Confidence 3 45664 44443 2222111 0112334455566655 48995311
Q ss_pred c-------------CCCCC--HHHHHHHHHcCCCEEEEccccc
Q 037779 229 A-------------GGVAT--PADAAMMMQLGCDGVFVGSGVF 256 (310)
Q Consensus 229 ~-------------GGI~t--~~di~~~~~~GadgV~VGsai~ 256 (310)
. ||-.. +.-...+..+||||+++=.-+.
T Consensus 203 sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GA~gl~IE~H~~ 245 (285)
T 3sz8_A 203 THSLQCRDPLGDASGGRRRQVLDLARAGIAVGIAGLFLEAHPD 245 (285)
T ss_dssp TTTCC---------------HHHHHHHHHHHCCSEEEEEEESC
T ss_pred CCccccCCCcCCCCCCchhhHHHHHHHHHHhCCCEEEEEeccC
Confidence 1 23110 2334567789999999977665
No 443
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=85.23 E-value=16 Score=32.77 Aligned_cols=115 Identities=14% Similarity=0.053 Sum_probs=64.2
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCC-------CCCCCChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCe
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGG-------VARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDY 117 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G-------~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~ 117 (310)
..+.+.+.++|+.++ +| .||-. ...| ...+...+.++.|+.+..+-+.=-....+.+++....++|+|.
T Consensus 111 g~~Le~lk~~Gf~Gv--~N-~ptvg-lidG~fr~~LEE~gm~~~~eve~I~~A~~~gL~Ti~~v~~~eeA~amA~agpDi 186 (286)
T 2p10_A 111 STFLRELKEIGFAGV--QN-FPTVG-LIDGLFRQNLEETGMSYAQEVEMIAEAHKLDLLTTPYVFSPEDAVAMAKAGADI 186 (286)
T ss_dssp HHHHHHHHHHTCCEE--EE-CSCGG-GCCHHHHHHHHHTTCCHHHHHHHHHHHHHTTCEECCEECSHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHhCCceE--EE-CCCcc-cccchhhhhHhhcCCCHHHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHcCCCE
Confidence 366799999999998 33 12100 0000 0112224455555554433222222233557888888999999
Q ss_pred eeecCC------------CChhH-------HHHHHHhcCCCCcEEee---cCCHHHHHHHHHh--CCCEE
Q 037779 118 VDESEV------------LTPAD-------EENHINKHNFRVPFVCG---CRNLGESLRRIRE--GAAMI 163 (310)
Q Consensus 118 v~~~~~------------~~~~~-------~~~~~~~~~~~l~v~~~---v~t~~ea~~a~~~--Gad~I 163 (310)
|..+-. .+..+ +.+.+++..+++.+++. +.+++|+..+++. |++-+
T Consensus 187 I~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc~gGpIstpeDv~~~l~~t~G~~G~ 256 (286)
T 2p10_A 187 LVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSHGGPIANPEDARFILDSCQGCHGF 256 (286)
T ss_dssp EEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEESTTCCSHHHHHHHHHHCTTCCEE
T ss_pred EEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEecCCCCCCHHHHHHHHhcCCCccEE
Confidence 873221 12222 22333444567777665 4889999999988 77643
No 444
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=85.16 E-value=4.4 Score=36.75 Aligned_cols=67 Identities=16% Similarity=0.215 Sum_probs=42.2
Q ss_pred HHHHHHHhc--CCCCEEEEccCCCCCHHHHH---HHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHcCCChh
Q 037779 211 DLVMQTKQL--GRLPVVHFAAGGVATPADAA---MMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTNYSDPD 279 (310)
Q Consensus 211 ~l~~~i~~~--~~iPVv~ia~GGI~t~~di~---~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~~~~~~ 279 (310)
++++.+.+. .++||++ -.|+ ++.+.+. .+.++|||++++..-.|..++.....+-|....++-.-|-
T Consensus 69 ~vi~~~~~~~~grvpVia-Gvg~-st~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPi 140 (314)
T 3d0c_A 69 QVATRVTELVNGRATVVA-GIGY-SVDTAIELGKSAIDSGADCVMIHQPVHPYITDAGAVEYYRNIIEALDAPS 140 (314)
T ss_dssp HHHHHHHHHHTTSSEEEE-EECS-SHHHHHHHHHHHHHTTCSEEEECCCCCSCCCHHHHHHHHHHHHHHSSSCE
T ss_pred HHHHHHHHHhCCCCeEEe-cCCc-CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCE
Confidence 344444432 4789963 4566 6555443 3345799999999999988877666655655555444453
No 445
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=84.97 E-value=0.9 Score=42.22 Aligned_cols=90 Identities=12% Similarity=0.048 Sum_probs=57.2
Q ss_pred ccceeeecCCccccCCC-HHHHHHHHHcC-CcEEEecccc----cch--h--------hhcCC---CC-CCCChHHHHHH
Q 037779 28 VGLAQMLRGGVIMDVVT-PEQARIAEEAG-ACAVMALERV----PAD--I--------RAQGG---VA-RMSDPQLIKQI 87 (310)
Q Consensus 28 ~~~~~~l~~g~i~~~~~-~~~a~~~~~~G-a~~I~~l~~~----~~d--~--------r~~~G---~~-~~~~~~~i~~i 87 (310)
.|+.++|+-+. +... .+.++.+.++| +++|...|.. ..| . ..++| .. .....+.++++
T Consensus 194 ~PV~vKi~p~~--d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v 271 (354)
T 4ef8_A 194 HSFGVKMPPYF--DFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAF 271 (354)
T ss_dssp SCEEEEECCCC--SHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHH
T ss_pred CCeEEEecCCC--CHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHH
Confidence 57788888753 1111 24567777888 9998654411 001 0 11222 10 01235678888
Q ss_pred Hhhc-CcceEeeccccchHHHHHHHHcCCCeee
Q 037779 88 KSSV-TIPVMAKARIGHFVEAQILEAIGVDYVD 119 (310)
Q Consensus 88 ~~~~-~lPv~~kd~i~~~~~~~~~~~aGad~v~ 119 (310)
++.. ++||+....|.+.+++..+..+|||.|-
T Consensus 272 ~~~~~~ipII~~GGI~s~~da~~~l~aGAd~V~ 304 (354)
T 4ef8_A 272 YRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQ 304 (354)
T ss_dssp HHHCTTSEEEEESCCCSHHHHHHHHHHTEEEEE
T ss_pred HHhCCCCCEEEECCcCCHHHHHHHHHcCCCEEE
Confidence 8876 7999999998877888777789999986
No 446
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=84.97 E-value=3.8 Score=36.53 Aligned_cols=43 Identities=26% Similarity=0.324 Sum_probs=34.5
Q ss_pred ChHHHHHHHhhcCcceE--eeccccchHHHHHHHHcCCCeee-ecC
Q 037779 80 DPQLIKQIKSSVTIPVM--AKARIGHFVEAQILEAIGVDYVD-ESE 122 (310)
Q Consensus 80 ~~~~i~~i~~~~~lPv~--~kd~i~~~~~~~~~~~aGad~v~-~~~ 122 (310)
+.+.++++++.+++|++ +...+.+.+.+..+.++|||.+. .+.
T Consensus 195 ~~~~i~~l~~~~~~pvi~~a~GGI~~~e~i~~~~~aGadgvvvGsa 240 (297)
T 2zbt_A 195 PFELVKWVHDHGRLPVVNFAAGGIATPADAALMMHLGMDGVFVGSG 240 (297)
T ss_dssp CHHHHHHHHHHSSCSSCEEBCSSCCSHHHHHHHHHTTCSEEEECGG
T ss_pred hHHHHHHHHHhcCCCcEEEeeCCCCCHHHHHHHHHcCCCEEEEchH
Confidence 46788999988899988 77777566788888899999987 443
No 447
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=84.88 E-value=5.8 Score=35.87 Aligned_cols=63 Identities=11% Similarity=0.186 Sum_probs=38.9
Q ss_pred HHHHHHHhc--CCCCEEEEccCCCCCHHHHH---HHHHcCC-CEEEEccccccCCCHHHHHHHHHHHHHc
Q 037779 211 DLVMQTKQL--GRLPVVHFAAGGVATPADAA---MMMQLGC-DGVFVGSGVFKSGDPVRRARAIVQAVTN 274 (310)
Q Consensus 211 ~l~~~i~~~--~~iPVv~ia~GGI~t~~di~---~~~~~Ga-dgV~VGsai~~~~dp~~~~~~~~~~~~~ 274 (310)
++++.+.+. .++||++ -.|+.++.+.+. .+.++|+ |++++..-.+..++.....+-|....++
T Consensus 64 ~v~~~~~~~~~grvpVia-Gvg~~~t~~ai~la~~A~~~Ga~davlv~~P~y~~~s~~~l~~~f~~va~a 132 (311)
T 3h5d_A 64 ELFAAVQKVVNGRVPLIA-GVGTNDTRDSIEFVKEVAEFGGFAAGLAIVPYYNKPSQEGMYQHFKAIADA 132 (311)
T ss_dssp HHHHHHHHHSCSSSCEEE-ECCCSSHHHHHHHHHHHHHSCCCSEEEEECCCSSCCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhCCCCcEEE-eCCCcCHHHHHHHHHHHHhcCCCcEEEEcCCCCCCCCHHHHHHHHHHHHHh
Confidence 344444443 4789953 344444333332 3345697 9999999998888776666555555554
No 448
>1dos_A Aldolase class II; lyase, classii fructose 1,6-bisphosphate aldolase, glycolysis; 1.67A {Escherichia coli} SCOP: c.1.10.2 PDB: 1b57_A* 1gyn_A 1zen_A
Probab=84.86 E-value=24 Score=32.58 Aligned_cols=48 Identities=10% Similarity=0.144 Sum_probs=36.5
Q ss_pred cHHHHHHHHhc---------CCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEcccccc
Q 037779 209 PYDLVMQTKQL---------GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 209 ~~~l~~~i~~~---------~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~ 257 (310)
++++++.+.+. .++|+|.=-++|+ +.+++++++++|..-|=++|.+-.
T Consensus 237 ~~~~L~~i~~~i~~~~g~~~~~vpLVlHGgSG~-~~e~i~~ai~~GV~KiNi~Tdl~~ 293 (358)
T 1dos_A 237 TPTILRDSQEYVSKKHNLPHNSLNFVFHGGSGS-TAQEIKDSVSYGVVKMNIDTDTQW 293 (358)
T ss_dssp CTHHHHHHHHHHHHHHTCCTTCSCEEECSCTTC-CHHHHHHHHHTTEEEEEECHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCcEEEeCCCCC-CHHHHHHHHHCCCeEEEEcHHHHH
Confidence 45566666552 4689876555577 478999999999999999997755
No 449
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=84.85 E-value=5.6 Score=36.62 Aligned_cols=53 Identities=19% Similarity=0.323 Sum_probs=34.6
Q ss_pred CCCCEEEEccCCCCCHHHHH---HHHHcCCCEEEEccccccC-CCHHHHHHHHHHHHH
Q 037779 220 GRLPVVHFAAGGVATPADAA---MMMQLGCDGVFVGSGVFKS-GDPVRRARAIVQAVT 273 (310)
Q Consensus 220 ~~iPVv~ia~GGI~t~~di~---~~~~~GadgV~VGsai~~~-~dp~~~~~~~~~~~~ 273 (310)
.++||+ +-.|+.++.+.+. .+.++|||++++..-.|.. ++.....+-|....+
T Consensus 91 grvpVi-aGvg~~st~eai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~IA~ 147 (344)
T 2hmc_A 91 AGIPVI-VGTGAVNTASAVAHAVHAQKVGAKGLMVIPRVLSRGSVIAAQKAHFKAILS 147 (344)
T ss_dssp TTCCEE-EECCCSSHHHHHHHHHHHHHHTCSEEEECCCCSSSTTCHHHHHHHHHHHHH
T ss_pred CCCcEE-EecCCCCHHHHHHHHHHHHhcCCCEEEECCCccCCCCCHHHHHHHHHHHHh
Confidence 578996 3445554343333 3345799999999999987 676655555555555
No 450
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=84.81 E-value=2.7 Score=38.09 Aligned_cols=62 Identities=18% Similarity=0.180 Sum_probs=37.9
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHH----HHH---hhcCcceEeeccccchHHHHHHHH--cCCC
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIK----QIK---SSVTIPVMAKARIGHFVEAQILEA--IGVD 116 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~----~i~---~~~~lPv~~kd~i~~~~~~~~~~~--aGad 116 (310)
+.|+.+.+.||+.| +++- |.......+.++ .++ +.+++|+++-.. .++-++...+ +|++
T Consensus 41 ~~A~~~v~~GAdiI-DIg~---------g~~~v~~~eem~rvv~~i~~~~~~~~vpisIDT~--~~~V~eaaL~~~~Ga~ 108 (300)
T 3k13_A 41 SIARQQVEDGALVI-DVNM---------DDGLLDARTEMTTFLNLIMSEPEIARVPVMIDSS--KWEVIEAGLKCLQGKS 108 (300)
T ss_dssp HHHHHHHHTTCSEE-EEEC---------CCTTSCHHHHHHHHHHHHHTCHHHHTSCEEEECS--CHHHHHHHHHHCSSCC
T ss_pred HHHHHHHHCCCCEE-EECC---------CCCCCCHHHHHHHHHHHHHHhhhcCCCeEEEeCC--CHHHHHHHHHhcCCCC
Confidence 67999999999988 6641 111111122222 232 446899987654 3456666666 7999
Q ss_pred eee
Q 037779 117 YVD 119 (310)
Q Consensus 117 ~v~ 119 (310)
.|-
T Consensus 109 iIN 111 (300)
T 3k13_A 109 IVN 111 (300)
T ss_dssp EEE
T ss_pred EEE
Confidence 876
No 451
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=84.61 E-value=10 Score=27.99 Aligned_cols=57 Identities=16% Similarity=0.312 Sum_probs=38.8
Q ss_pred cHHHHHHHHhc---CCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHH
Q 037779 209 PYDLVMQTKQL---GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAV 272 (310)
Q Consensus 209 ~~~l~~~i~~~---~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~ 272 (310)
..++++.+++. .++|++++ .+-.+.+...++++.|+++++ .++-++.+....+...+
T Consensus 61 g~~~~~~l~~~~~~~~~pii~~--s~~~~~~~~~~~~~~Ga~~~l-----~KP~~~~~L~~~i~~~l 120 (122)
T 3gl9_A 61 GFTVLKKLQEKEEWKRIPVIVL--TAKGGEEDESLALSLGARKVM-----RKPFSPSQFIEEVKHLL 120 (122)
T ss_dssp HHHHHHHHHTSTTTTTSCEEEE--ESCCSHHHHHHHHHTTCSEEE-----ESSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccccCCCEEEE--ecCCchHHHHHHHhcChhhhc-----cCCCCHHHHHHHHHHHh
Confidence 46677777653 46899755 444578899999999999874 45556665555554443
No 452
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=84.59 E-value=23 Score=33.81 Aligned_cols=47 Identities=19% Similarity=0.065 Sum_probs=35.0
Q ss_pred HHHHHHHHhcC-CCC-EEEEccC--CCCCHHHHHHHHHcCCCEEEEcccccc
Q 037779 210 YDLVMQTKQLG-RLP-VVHFAAG--GVATPADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 210 ~~l~~~i~~~~-~iP-Vv~ia~G--GI~t~~di~~~~~~GadgV~VGsai~~ 257 (310)
++.++.+++.. ++| +|.=+.+ |+ +.++++++.+.|+..+=||+.++.
T Consensus 244 ~e~~~~L~~~v~~~P~LVlhghStDy~-~~e~l~~~V~~GiaklNVgp~Lt~ 294 (450)
T 3txv_A 244 RARAEKLSATLGQLHGMVFEAHSTDYQ-TPDALRELVADGFAILKVGPGLTF 294 (450)
T ss_dssp TTTTSHHHHGGGTSTTCEEEESCCTTC-CHHHHHHHHHTTEEEEEECHHHHH
T ss_pred HHHHHHHHHHhccCCCEEEecCCCCCC-CHHHHHHHHHcCCcEEEEChHHHH
Confidence 44555555554 678 7643344 55 689999999999999999999886
No 453
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=84.22 E-value=5.2 Score=33.67 Aligned_cols=105 Identities=17% Similarity=0.087 Sum_probs=57.8
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeecccc--------chH-HHHHHHHcCCC
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIG--------HFV-EAQILEAIGVD 116 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~--------~~~-~~~~~~~aGad 116 (310)
.+++.+.++|++.+.. +...| .+.++.+++..+++++...-.. ..+ .+....+.|++
T Consensus 69 ~~v~~~~~~Gad~vtv--------h~~~g------~~~i~~~~~~~gv~vl~~t~~~~~~~~~~~~v~~~~~~a~~~G~~ 134 (208)
T 2czd_A 69 LIARKVFGAGADYVIV--------HTFVG------RDSVMAVKELGEIIMVVEMSHPGALEFINPLTDRFIEVANEIEPF 134 (208)
T ss_dssp HHHHHHHHTTCSEEEE--------ESTTC------HHHHHHHHTTSEEEEECCCCSGGGGTTTGGGHHHHHHHHHHHCCS
T ss_pred HHHHHHHhcCCCEEEE--------eccCC------HHHHHHHHHhCCcEEEEecCCcchhhHHHHHHHHHHHHHHHhCCc
Confidence 5788999999999843 22322 3457777765444444331111 111 23455668999
Q ss_pred eeeecCCCChhHHHHHHHh-cCCCCcEEe-ecCCH-HHHHHHHHhCCCEEEEe
Q 037779 117 YVDESEVLTPADEENHINK-HNFRVPFVC-GCRNL-GESLRRIREGAAMIRTK 166 (310)
Q Consensus 117 ~v~~~~~~~~~~~~~~~~~-~~~~l~v~~-~v~t~-~ea~~a~~~Gad~I~v~ 166 (310)
++..... .++++ +.+++ .+.+..++. +++.. ..+..+.+.|+|++.+.
T Consensus 135 G~~~~~~-~~~~i-~~lr~~~~~~~~iv~gGI~~~g~~~~~~~~aGad~vvvG 185 (208)
T 2czd_A 135 GVIAPGT-RPERI-GYIRDRLKEGIKILAPGIGAQGGKAKDAVKAGADYIIVG 185 (208)
T ss_dssp EEECCCS-STHHH-HHHHHHSCTTCEEEECCCCSSTTHHHHHHHHTCSEEEEC
T ss_pred EEEECCC-ChHHH-HHHHHhCCCCeEEEECCCCCCCCCHHHHHHcCCCEEEEC
Confidence 9863222 23333 34444 333333322 34431 15667778899998875
No 454
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=84.16 E-value=3.8 Score=36.99 Aligned_cols=83 Identities=10% Similarity=0.116 Sum_probs=47.6
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHH-------HHHHHhhcCcceEeeccccchHHHHHHHHcCCCee
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQL-------IKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYV 118 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~-------i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v 118 (310)
+.|+.+.+.||+.| +++-.+|.+ |+......+. ++.+++. ++|+++-.+ +.+-++.+.++|++.|
T Consensus 50 ~~a~~~v~~GAdiI-DIGgeSTrP----ga~~v~~~eE~~Rv~pvi~~l~~~-~vpiSIDT~--~~~Va~aAl~aGa~iI 121 (294)
T 2y5s_A 50 RRAERMIAEGADLL-DIGGESTRP----GAPPVPLDEELARVIPLVEALRPL-NVPLSIDTY--KPAVMRAALAAGADLI 121 (294)
T ss_dssp HHHHHHHHTTCSEE-EEESSCCST----TCCCCCHHHHHHHHHHHHHHHGGG-CSCEEEECC--CHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHCCCCEE-EECCCcCCC----CCCCCCHHHHHHHHHHHHHHHhhC-CCeEEEECC--CHHHHHHHHHcCCCEE
Confidence 67999999999998 664222211 1111111222 3344433 889877644 3356778888999999
Q ss_pred eecCCCChhHHHHHHHhc
Q 037779 119 DESEVLTPADEENHINKH 136 (310)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~ 136 (310)
-.......++....+.++
T Consensus 122 NdVsg~~d~~m~~~~a~~ 139 (294)
T 2y5s_A 122 NDIWGFRQPGAIDAVRDG 139 (294)
T ss_dssp EETTTTCSTTHHHHHSSS
T ss_pred EECCCCCchHHHHHHHHh
Confidence 732222234555555443
No 455
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=84.12 E-value=14 Score=33.05 Aligned_cols=92 Identities=15% Similarity=0.060 Sum_probs=56.4
Q ss_pred CCCCCCChHHHHHHHhhcCcceEeecccc-c---h-HHHHHHHHcCCCeee-e---cC-CCCh----hHHHHHHHhcCCC
Q 037779 74 GVARMSDPQLIKQIKSSVTIPVMAKARIG-H---F-VEAQILEAIGVDYVD-E---SE-VLTP----ADEENHINKHNFR 139 (310)
Q Consensus 74 G~~~~~~~~~i~~i~~~~~lPv~~kd~i~-~---~-~~~~~~~~aGad~v~-~---~~-~~~~----~~~~~~~~~~~~~ 139 (310)
|+..+.+.++++++. .++.||++|.... + + .-++.+.+.|.+-|. . +. ..+. -..+..+++...+
T Consensus 117 gA~~~~n~~LLr~va-~~gkPVilK~G~~~t~~ei~~ave~i~~~Gn~~i~L~erg~~y~~~~~~vdl~~i~~lk~~~~~ 195 (285)
T 3sz8_A 117 PAFLARQTDLVVAIA-KAGKPVNVKKPQFMSPTQLKHVVSKCGEVGNDRVMLCERGSSFGYDNLVVDMLGFRQMAETTGG 195 (285)
T ss_dssp CGGGTTCHHHHHHHH-HTSSCEEEECCTTSCGGGTHHHHHHHHHTTCCCEEEEECCEECSSSCEECCTTHHHHHHHHTTS
T ss_pred CccccCCHHHHHHHH-ccCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeCCCCCCCCcCccCHHHHHHHHHhCCC
Confidence 445577899999977 5799999987653 2 2 234556678887654 2 11 1111 1233344444336
Q ss_pred CcEEe-ecCC------------------HHHHHHHHHhCCC--EEEEe
Q 037779 140 VPFVC-GCRN------------------LGESLRRIREGAA--MIRTK 166 (310)
Q Consensus 140 l~v~~-~v~t------------------~~ea~~a~~~Gad--~I~v~ 166 (310)
++++. ..|+ ..-+..|..+||| +|=+|
T Consensus 196 ~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GA~gl~IE~H 243 (285)
T 3sz8_A 196 CPVIFDVTHSLQCRDPLGDASGGRRRQVLDLARAGIAVGIAGLFLEAH 243 (285)
T ss_dssp CCEEEETTTTCC---------------HHHHHHHHHHHCCSEEEEEEE
T ss_pred CCEEEeCCCccccCCCcCCCCCCchhhHHHHHHHHHHhCCCEEEEEec
Confidence 88888 5677 3345677789999 55554
No 456
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=84.07 E-value=6.6 Score=32.98 Aligned_cols=57 Identities=16% Similarity=0.077 Sum_probs=40.5
Q ss_pred HHHHHHHHhcCCCCEEEEccCCCCCHH-HHHHHHHcCCCEEEEccccccCCCHHHHHHHHHH
Q 037779 210 YDLVMQTKQLGRLPVVHFAAGGVATPA-DAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQ 270 (310)
Q Consensus 210 ~~l~~~i~~~~~iPVv~ia~GGI~t~~-di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~ 270 (310)
.+.++.+++..+.|+ .+.+.|++++ .+..+.++|+|+|.+...-. +.+....+.+.+
T Consensus 50 ~~~i~~i~~~~~~~~--~v~l~v~d~~~~i~~~~~~gad~v~vh~~~~--~~~~~~~~~~~~ 107 (220)
T 2fli_A 50 ADVVASMRKHSKLVF--DCHLMVVDPERYVEAFAQAGADIMTIHTEST--RHIHGALQKIKA 107 (220)
T ss_dssp HHHHHHHHTTCCSEE--EEEEESSSGGGGHHHHHHHTCSEEEEEGGGC--SCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCE--EEEEeecCHHHHHHHHHHcCCCEEEEccCcc--ccHHHHHHHHHH
Confidence 667788877656677 4568888876 58888899999999976543 456555555543
No 457
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=83.99 E-value=16 Score=33.10 Aligned_cols=139 Identities=15% Similarity=0.026 Sum_probs=72.6
Q ss_pred ceEEEEeccCCC-ccccccceeeecCCccccC-CC-HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHH
Q 037779 12 NGAIYETTKKSP-FSVKVGLAQMLRGGVIMDV-VT-PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIK 88 (310)
Q Consensus 12 ~~~i~e~k~~sp-~~~~~~~~~~l~~g~i~~~-~~-~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~ 88 (310)
+.++.||--.+| |+ ..++. |...+. .. .+.|+.+.+.||+.| +++...+++..+.=+ .....+.++.++
T Consensus 47 p~i~m~I~n~tpdsf-~d~i~-----~~~~~~~~~~~~~A~~~v~~GAdiI-DIg~~StrP~~~~vs-~eee~~vV~~v~ 118 (310)
T 2h9a_B 47 PRFALEVFDTPPTDW-PDILV-----EPFKDVINDPVAWAKKCVEYGADIV-ALRLVSAHPDGQNRS-GAELAEVCKAVA 118 (310)
T ss_dssp CEEEEEEESSCCSSC-CHHHH-----GGGTTTTTCHHHHHHHHHHTTCSEE-EEECGGGCTTTTCCC-HHHHHHHHHHHH
T ss_pred CeEEEEEeeCCCccc-chhhh-----hhhccHHHHHHHHHHHHHHcCCcEE-EEeCccCCCCCCCCC-HHHHHHHHHHHH
Confidence 345777777777 32 11111 122222 23 478999999999998 665222322211000 000133567778
Q ss_pred hhcCcceEeecccc---chHHHHHHHHcCCC---eeeecCCCChhHHHHHHHhcCCCCcEEeecC-CHHHH----HHHHH
Q 037779 89 SSVTIPVMAKARIG---HFVEAQILEAIGVD---YVDESEVLTPADEENHINKHNFRVPFVCGCR-NLGES----LRRIR 157 (310)
Q Consensus 89 ~~~~lPv~~kd~i~---~~~~~~~~~~aGad---~v~~~~~~~~~~~~~~~~~~~~~l~v~~~v~-t~~ea----~~a~~ 157 (310)
+.+++|+++-|--+ +.+-++.+.++|++ .|-.......+++...+.++ +.++++-.. +.+.+ .++.+
T Consensus 119 ~~~~vplsI~DT~~~~~~~~V~eaal~aga~~k~iINdvs~~~~~~~~~~aa~~--g~~vv~m~~~dv~~l~~~~~~a~~ 196 (310)
T 2h9a_B 119 DAIDVPLMIIGCGVEEKDAEIFPVIGEALSGRNCLLSSATKDNYKPIVATCMVH--GHSVVASAPLDINLSKQLNIMIME 196 (310)
T ss_dssp HHCSSCEEEECCSCHHHHHHHHHHHHHHTTTSCCEEEEECTTTHHHHHHHHHHH--TCEEEEECSSCHHHHHHHHHHHHT
T ss_pred HhCCceEEEECCCCCCCCHHHHHHHHHhCCCCCCEEEECCCCccHHHHHHHHHh--CCCEEEEChhHHHHHHHHHHHHHH
Confidence 88899998833211 22456777889997 44422223445666655554 344444322 44433 23445
Q ss_pred hCC
Q 037779 158 EGA 160 (310)
Q Consensus 158 ~Ga 160 (310)
+|.
T Consensus 197 ~Gi 199 (310)
T 2h9a_B 197 MNL 199 (310)
T ss_dssp TTC
T ss_pred CCC
Confidence 676
No 458
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=83.95 E-value=5.8 Score=37.15 Aligned_cols=106 Identities=10% Similarity=0.160 Sum_probs=68.4
Q ss_pred HHHHHHHHcCCCeeeecCC-----------CChhHHHHHHHh--cCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCC
Q 037779 105 VEAQILEAIGVDYVDESEV-----------LTPADEENHINK--HNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGT 171 (310)
Q Consensus 105 ~~~~~~~~aGad~v~~~~~-----------~~~~~~~~~~~~--~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~ 171 (310)
+.++.+.++|++.|-.... ++. +-.+.+.+ ...|++++.++.++..+..+.+. +|++.+...
T Consensus 160 ~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~-egl~~L~~~~~~~Gl~~~te~~d~~~~~~l~~~-vd~lkIgs~--- 234 (385)
T 3nvt_A 160 AVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGL-EGLKILKRVSDEYGLGVISEIVTPADIEVALDY-VDVIQIGAR--- 234 (385)
T ss_dssp HHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTH-HHHHHHHHHHHHHTCEEEEECCSGGGHHHHTTT-CSEEEECGG---
T ss_pred HHHHHHHHcCCCeEEcccccCCCChHhhcCCCH-HHHHHHHHHHHHcCCEEEEecCCHHHHHHHHhh-CCEEEECcc---
Confidence 3456677799999862211 222 33333333 33689999999999988888777 899888521
Q ss_pred CchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCC-CCHHHHHHHH----HcCC
Q 037779 172 GNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGV-ATPADAAMMM----QLGC 246 (310)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI-~t~~di~~~~----~~Ga 246 (310)
....+.+++.+.+ .+.||+ ..=|. .|++++..+. ..|.
T Consensus 235 ----------------------------------~~~n~~LL~~~a~-~gkPVi--lk~G~~~t~~e~~~Ave~i~~~Gn 277 (385)
T 3nvt_A 235 ----------------------------------NMQNFELLKAAGR-VDKPIL--LKRGLSATIEEFIGAAEYIMSQGN 277 (385)
T ss_dssp ----------------------------------GTTCHHHHHHHHT-SSSCEE--EECCTTCCHHHHHHHHHHHHTTTC
T ss_pred ----------------------------------cccCHHHHHHHHc-cCCcEE--EecCCCCCHHHHHHHHHHHHHcCC
Confidence 0124567777765 467995 35666 8898876555 3577
Q ss_pred CEEEEc
Q 037779 247 DGVFVG 252 (310)
Q Consensus 247 dgV~VG 252 (310)
.-+++.
T Consensus 278 ~~i~L~ 283 (385)
T 3nvt_A 278 GKIILC 283 (385)
T ss_dssp CCEEEE
T ss_pred CeEEEE
Confidence 555553
No 459
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=83.95 E-value=21 Score=32.45 Aligned_cols=47 Identities=13% Similarity=0.170 Sum_probs=38.1
Q ss_pred cHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcC-CCEEEEcccccc
Q 037779 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVFK 257 (310)
Q Consensus 209 ~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~G-adgV~VGsai~~ 257 (310)
+++..+.+++..++|| ++.+.+.+++++.++++.| +|.|.+--.-+.
T Consensus 228 ~~~~~~~l~~~~~iPI--~~de~~~~~~~~~~~i~~~~~d~v~ik~~~~G 275 (359)
T 1mdl_A 228 DYEGHQRIQSKLNVPV--QMGENWLGPEEMFKALSIGACRLAMPDAMKIG 275 (359)
T ss_dssp CHHHHHHHHHTCSSCE--EECTTCCSHHHHHHHHHTTCCSEECCBTTTTT
T ss_pred hHHHHHHHHHhCCCCE--EeCCCCCCHHHHHHHHHcCCCCEEeecchhhC
Confidence 5777788888778999 6689999999999999874 899988755444
No 460
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=83.91 E-value=5.1 Score=36.23 Aligned_cols=67 Identities=16% Similarity=0.179 Sum_probs=40.4
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCCh---HHHHHHHhhc--CcceEeeccccc----hHHHHHHHHcCCC
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDP---QLIKQIKSSV--TIPVMAKARIGH----FVEAQILEAIGVD 116 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~---~~i~~i~~~~--~lPv~~kd~i~~----~~~~~~~~~aGad 116 (310)
+.++.+.+.|+++|..+. .|.+ +..+... +.++.+.+.+ ++||++...-.. .+.++.+.++|||
T Consensus 33 ~lv~~li~~Gv~gl~v~G--tTGE-----~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gad 105 (309)
T 3fkr_A 33 RAVDFMIDAGSDGLCILA--NFSE-----QFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLGAA 105 (309)
T ss_dssp HHHHHHHHTTCSCEEESS--GGGT-----GGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEECc--cccC-----cccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcCCC
Confidence 678889999999985441 0100 1112222 2344444443 589998754332 2456677889999
Q ss_pred eee
Q 037779 117 YVD 119 (310)
Q Consensus 117 ~v~ 119 (310)
+++
T Consensus 106 avl 108 (309)
T 3fkr_A 106 MVM 108 (309)
T ss_dssp EEE
T ss_pred EEE
Confidence 998
No 461
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=83.91 E-value=6.9 Score=34.46 Aligned_cols=129 Identities=15% Similarity=0.170 Sum_probs=65.3
Q ss_pred ccceeeecCCccccCCCHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCC---hHHHHHHHhh---cCcceEeeccc
Q 037779 28 VGLAQMLRGGVIMDVVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSD---PQLIKQIKSS---VTIPVMAKARI 101 (310)
Q Consensus 28 ~~~~~~l~~g~i~~~~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~---~~~i~~i~~~---~~lPv~~kd~i 101 (310)
.|+..=+.-| ..... .+.++.+.++|+.+| .++ |.....|....+. .+.|+.+++. .++|+.++.+.
T Consensus 81 ~pviaD~~~G-yg~~~-~~~~~~l~~aGa~gv-~iE----d~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRt 153 (255)
T 2qiw_A 81 IPVSVDVESG-YGLSP-ADLIAQILEAGAVGI-NVE----DVVHSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRT 153 (255)
T ss_dssp SCEEEECTTC-TTCCH-HHHHHHHHHTTCCEE-EEC----SEEGGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEE
T ss_pred CCEEeccCCC-cCcHH-HHHHHHHHHcCCcEE-EEC----CCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 3455555555 22222 788999999999998 453 2211111111111 2344444443 25785554433
Q ss_pred cc---------------hHHHHHHHHcCCCeeeecCCCChhHHHHHHHhcCCCCcEEeec-CCH----HHHHHHHHhCCC
Q 037779 102 GH---------------FVEAQILEAIGVDYVDESEVLTPADEENHINKHNFRVPFVCGC-RNL----GESLRRIREGAA 161 (310)
Q Consensus 102 ~~---------------~~~~~~~~~aGad~v~~~~~~~~~~~~~~~~~~~~~l~v~~~v-~t~----~ea~~a~~~Gad 161 (310)
+. .+.++.+.++|||.|..... +..+..+.+.+. ..+++.+-+ ... -......++|..
T Consensus 154 d~~~~g~~~~~~~~~~ai~ra~a~~eAGAd~i~~e~~-~~~~~~~~i~~~-~~~P~n~~~~~~~~~p~~~~~eL~~lGv~ 231 (255)
T 2qiw_A 154 DAVKLGADVFEDPMVEAIKRIKLMEQAGARSVYPVGL-STAEQVERLVDA-VSVPVNITAHPVDGHGAGDLATLAGLGVR 231 (255)
T ss_dssp CHHHHCTTTSSSHHHHHHHHHHHHHHHTCSEEEECCC-CSHHHHHHHHTT-CSSCBEEECBTTTBBTTBCHHHHHHTTCC
T ss_pred chhhccCCcchHHHHHHHHHHHHHHHcCCcEEEEcCC-CCHHHHHHHHHh-CCCCEEEEecCCCCCCCCCHHHHHHcCCC
Confidence 21 13567788899999985443 323444445441 223322211 110 123445567888
Q ss_pred EEEE
Q 037779 162 MIRT 165 (310)
Q Consensus 162 ~I~v 165 (310)
.|..
T Consensus 232 ~v~~ 235 (255)
T 2qiw_A 232 RVTF 235 (255)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 7765
No 462
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=83.91 E-value=3.9 Score=35.90 Aligned_cols=88 Identities=11% Similarity=0.002 Sum_probs=56.4
Q ss_pred ccccchHHHHHHHHcCCCeeeec--CC------CChhHHHHHHHhcCCCCcEEee--cCCHH-HHHHHHHhCCCEEEEec
Q 037779 99 ARIGHFVEAQILEAIGVDYVDES--EV------LTPADEENHINKHNFRVPFVCG--CRNLG-ESLRRIREGAAMIRTKG 167 (310)
Q Consensus 99 d~i~~~~~~~~~~~aGad~v~~~--~~------~~~~~~~~~~~~~~~~l~v~~~--v~t~~-ea~~a~~~Gad~I~v~g 167 (310)
|+..-.+.++.+.++|+|.++.. +. ---..+++.+++..+.+++-+. +.+++ -++.+.++|||++.++.
T Consensus 38 D~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p~~~ldvHLmv~~p~~~i~~~~~aGAd~itvH~ 117 (246)
T 3inp_A 38 DLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKPVDALIESFAKAGATSIVFHP 117 (246)
T ss_dssp CGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTCCSCEEEEEECSSCHHHHHHHHHHTCSEEEECG
T ss_pred ChhhHHHHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCCCCeEEEEEeeCCHHHHHHHHHHcCCCEEEEcc
Confidence 44433367788888999998731 11 1123667777775445554443 44554 45567789999999986
Q ss_pred CCCCCchHHHHHHHHHhhcc
Q 037779 168 EAGTGNIVEAVRHVRSVMGD 187 (310)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~ 187 (310)
+.. .++.++++++++.+..
T Consensus 118 Ea~-~~~~~~i~~ir~~G~k 136 (246)
T 3inp_A 118 EAS-EHIDRSLQLIKSFGIQ 136 (246)
T ss_dssp GGC-SCHHHHHHHHHTTTSE
T ss_pred ccc-hhHHHHHHHHHHcCCe
Confidence 544 3566777777776654
No 463
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=83.86 E-value=5.4 Score=36.23 Aligned_cols=63 Identities=13% Similarity=0.134 Sum_probs=34.8
Q ss_pred HHHHHHHhc--CCCCEEEEccCCCCCHHHH---HHHHHcCCCEEEEccccccC--CCHHHHHHHHHHHHHc
Q 037779 211 DLVMQTKQL--GRLPVVHFAAGGVATPADA---AMMMQLGCDGVFVGSGVFKS--GDPVRRARAIVQAVTN 274 (310)
Q Consensus 211 ~l~~~i~~~--~~iPVv~ia~GGI~t~~di---~~~~~~GadgV~VGsai~~~--~dp~~~~~~~~~~~~~ 274 (310)
++++.+.+. .++||++ -.|+.++.+.+ +.+.++|||++++..-.|.. .+.....+-|....++
T Consensus 68 ~v~~~~~~~~~grvpvia-Gvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~kp~~~~~l~~~f~~ia~a 137 (318)
T 3qfe_A 68 QLIATARKAVGPDFPIMA-GVGAHSTRQVLEHINDASVAGANYVLVLPPAYFGKATTPPVIKSFFDDVSCQ 137 (318)
T ss_dssp HHHHHHHHHHCTTSCEEE-ECCCSSHHHHHHHHHHHHHHTCSEEEECCCCC---CCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCcEEE-eCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCCHHHHHHHHHHHHhh
Confidence 344444442 4789963 44555444333 34446799999999996543 3555544444444443
No 464
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=83.81 E-value=8.3 Score=34.02 Aligned_cols=107 Identities=11% Similarity=0.207 Sum_probs=66.3
Q ss_pred HHHHHHHHcCCCeeeecCC--C-Ch-------hHHHHHHHh--cCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCC
Q 037779 105 VEAQILEAIGVDYVDESEV--L-TP-------ADEENHINK--HNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTG 172 (310)
Q Consensus 105 ~~~~~~~~aGad~v~~~~~--~-~~-------~~~~~~~~~--~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~ 172 (310)
+.++.+.++|++.|-.... . ++ .+-.+.+.+ ...|++++.++++...+..+.+. +|++.+...
T Consensus 41 ~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~-vd~~kIga~---- 115 (262)
T 1zco_A 41 KVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEYGLVTVTEVMDTRHVELVAKY-SDILQIGAR---- 115 (262)
T ss_dssp HHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCEEEEECCCGGGHHHHHHH-CSEEEECGG----
T ss_pred HHHHHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHcCCcEEEeeCCHHhHHHHHhh-CCEEEECcc----
Confidence 3455666688887752111 0 11 222233332 33679999999999998888888 999998622
Q ss_pred chHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEccCCCC-CHHHHHHHHH----cCC-
Q 037779 173 NIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVA-TPADAAMMMQ----LGC- 246 (310)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia~GGI~-t~~di~~~~~----~Ga- 246 (310)
+ .....+++.+.+ .+.||+ ..=|.. |++++..+.+ .|.
T Consensus 116 ~---------------------------------~~n~~ll~~~a~-~~kPV~--lk~G~~~t~~e~~~Av~~i~~~Gn~ 159 (262)
T 1zco_A 116 N---------------------------------SQNFELLKEVGK-VENPVL--LKRGMGNTIQELLYSAEYIMAQGNE 159 (262)
T ss_dssp G---------------------------------TTCHHHHHHHTT-SSSCEE--EECCTTCCHHHHHHHHHHHHTTTCC
T ss_pred c---------------------------------ccCHHHHHHHHh-cCCcEE--EecCCCCCHHHHHHHHHHHHHCCCC
Confidence 0 123556777766 578995 356665 8988776653 465
Q ss_pred CEEEEc
Q 037779 247 DGVFVG 252 (310)
Q Consensus 247 dgV~VG 252 (310)
+.+++=
T Consensus 160 ~i~L~~ 165 (262)
T 1zco_A 160 NVILCE 165 (262)
T ss_dssp CEEEEE
T ss_pred eEEEEE
Confidence 444443
No 465
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=83.76 E-value=2.8 Score=38.03 Aligned_cols=61 Identities=20% Similarity=0.151 Sum_probs=37.7
Q ss_pred HHHHHHHhc--CCCCEEEEccCCCCCHHHHH----HHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHc
Q 037779 211 DLVMQTKQL--GRLPVVHFAAGGVATPADAA----MMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTN 274 (310)
Q Consensus 211 ~l~~~i~~~--~~iPVv~ia~GGI~t~~di~----~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~ 274 (310)
++++.+.+. .++||+ +.-|= +.++.. .+.++|||++++....+..++.....+-|....++
T Consensus 69 ~v~~~~v~~~~grvpVi--aGvg~-~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a 135 (316)
T 3e96_A 69 EEVRRTVEYVHGRALVV--AGIGY-ATSTAIELGNAAKAAGADAVMIHMPIHPYVTAGGVYAYFRDIIEA 135 (316)
T ss_dssp HHHHHHHHHHTTSSEEE--EEECS-SHHHHHHHHHHHHHHTCSEEEECCCCCSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCcEE--EEeCc-CHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHh
Confidence 344444442 478985 34342 444433 34467999999999998877776665555555444
No 466
>2f7f_A Nicotinate phosphoribosyltransferase, putative; structural genomics, PSI; 2.00A {Enterococcus faecalis} SCOP: c.1.17.1 d.41.2.1
Probab=83.68 E-value=3.5 Score=40.02 Aligned_cols=31 Identities=13% Similarity=0.093 Sum_probs=26.7
Q ss_pred EEccCCCCCHHHHHHHHHcCC--CEEEEcccccc
Q 037779 226 HFAAGGVATPADAAMMMQLGC--DGVFVGSGVFK 257 (310)
Q Consensus 226 ~ia~GGI~t~~di~~~~~~Ga--dgV~VGsai~~ 257 (310)
++++||| +.+.+.++.+.|+ +++.||+.|+.
T Consensus 289 I~aSggl-d~~~i~~l~~~G~~~~sfGvGT~Lt~ 321 (494)
T 2f7f_A 289 IYASNDL-DENTILNLKMQKSKIDVWGVGTKLIT 321 (494)
T ss_dssp EEECSSC-CHHHHHHHHHTTCCCCEEEECHHHHT
T ss_pred EEEECCC-CHHHHHHHHHcCCCEEEEecCccccc
Confidence 3789999 6999999999996 77778888887
No 467
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=83.65 E-value=1.4 Score=41.07 Aligned_cols=139 Identities=14% Similarity=0.191 Sum_probs=78.8
Q ss_pred cCcceEeecccc-ch-------HHHHHHHHcCCCeeeecC--CC-ChhH--HHHHHHhcCCCCcEEee--c------CCH
Q 037779 91 VTIPVMAKARIG-HF-------VEAQILEAIGVDYVDESE--VL-TPAD--EENHINKHNFRVPFVCG--C------RNL 149 (310)
Q Consensus 91 ~~lPv~~kd~i~-~~-------~~~~~~~~aGad~v~~~~--~~-~~~~--~~~~~~~~~~~l~v~~~--v------~t~ 149 (310)
...|+++...-+ +. ..++.+.+.|+-....+- .+ .|.. -.+.+++..++.+++.+ + .+.
T Consensus 58 l~~Pv~ia~MtGgt~~~~~in~~la~~a~~~G~~~~vGs~~~~l~~~~~~~s~~~vr~~ap~~~~~anlg~~ql~~~~~~ 137 (368)
T 3vkj_A 58 ISVPVMVTGMTGGRNELGRINKIIAEVAEKFGIPMGVGSQRVAIEKAEARESFAIVRKVAPTIPIIANLGMPQLVKGYGL 137 (368)
T ss_dssp ESSSEEECCCCCSSHHHHHHHHHHHHHHHHHTCCEECCCCHHHHHCGGGSHHHHHHHHHCSSSCEEEEEEGGGGGTTCCH
T ss_pred ccCCeEEecCCCCCchhhHHHHHHHHHHHHhCCCeeeecchhccCCHHHHhhHHHHHHhCcCcceecCcCeeecCCCCCH
Confidence 467988875543 21 236778889999886321 11 1221 11223333455555442 3 456
Q ss_pred HHHHHHHH-hCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCC-CcHHHHHHHHhcCCCCEEEE
Q 037779 150 GESLRRIR-EGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIA-APYDLVMQTKQLGRLPVVHF 227 (310)
Q Consensus 150 ~ea~~a~~-~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~-~~~~l~~~i~~~~~iPVv~i 227 (310)
+++.++.+ .+++.+.++-. ...+.+ .+.-+ +++. ...+.++.+++..++||++=
T Consensus 138 ~~~~~av~~~~a~al~Ihln----~~~~~~------------~p~g~--------~~~~~~~~~~i~~i~~~~~vPVivK 193 (368)
T 3vkj_A 138 KEFQDAIQMIEADAIAVHLN----PAQEVF------------QPEGE--------PEYQIYALEKLRDISKELSVPIIVK 193 (368)
T ss_dssp HHHHHHHHHTTCSEEEEECC----HHHHHH------------SSSCC--------CBCBTHHHHHHHHHHTTCSSCEEEE
T ss_pred HHHHHHHHHhcCCCeEEEec----chhhhh------------CCCCC--------chhhHHHHHHHHHHHHHcCCCEEEE
Confidence 77777664 57777776511 000000 00000 1111 13667788888778999521
Q ss_pred -ccCCCCCHHHHHHHHHcCCCEEEEccc
Q 037779 228 -AAGGVATPADAAMMMQLGCDGVFVGSG 254 (310)
Q Consensus 228 -a~GGI~t~~di~~~~~~GadgV~VGsa 254 (310)
..+|+ ++++++.+.++|+|+|.|+..
T Consensus 194 ~vG~g~-s~~~A~~l~~aGad~I~V~g~ 220 (368)
T 3vkj_A 194 ESGNGI-SMETAKLLYSYGIKNFDTSGQ 220 (368)
T ss_dssp CSSSCC-CHHHHHHHHHTTCCEEECCCB
T ss_pred eCCCCC-CHHHHHHHHhCCCCEEEEeCC
Confidence 25666 799999999999999999543
No 468
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=83.64 E-value=13 Score=33.36 Aligned_cols=141 Identities=16% Similarity=0.221 Sum_probs=78.1
Q ss_pred ChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeeeecC-CCChhHHHHHHHhcCCCCcEEeec---CCHHHHHHH
Q 037779 80 DPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVDESE-VLTPADEENHINKHNFRVPFVCGC---RNLGESLRR 155 (310)
Q Consensus 80 ~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~~~~-~~~~~~~~~~~~~~~~~l~v~~~v---~t~~ea~~a 155 (310)
-+..++++++..++|++--.+ +...++.+.+. +|.+-+.+ .....++.+.+.+ .+.++++.. .|++|.+.+
T Consensus 76 GL~~L~~~~~e~Glp~~tev~--d~~~v~~l~~~-vd~lkIgA~~~~n~~LLr~~a~--~gkPVilK~G~~~t~~e~~~a 150 (288)
T 3tml_A 76 GLRILSEVKRQLGLPVLTDVH--SIDEIEQVASV-VDVLQTPAFLCRQTDFIHACAR--SGKPVNIKKGQFLAPHDMKNV 150 (288)
T ss_dssp HHHHHHHHHHHHCCCEEEECC--SGGGHHHHHHH-CSEEEECGGGTTCHHHHHHHHT--SSSCEEEECCTTCCTTHHHHH
T ss_pred HHHHHHHHHHhcCCeEEEEeC--CHHHHHHHHHh-CCEEEECcccccCHHHHHHHHc--cCCcEEEeCCCCCCHHHHHHH
Confidence 355677888888999975433 22455666667 88887442 2334455555543 567777763 266665544
Q ss_pred H----HhCC-------CEEEEe-cCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCC
Q 037779 156 I----REGA-------AMIRTK-GEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLP 223 (310)
Q Consensus 156 ~----~~Ga-------d~I~v~-g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iP 223 (310)
+ +.|. +++-.+ |..|+.+ +...+...+..+++ .++|
T Consensus 151 ve~i~~~Gn~~~~~~~~i~L~erg~~y~~~-------------------------------~~~vdl~~i~~lk~-~~~p 198 (288)
T 3tml_A 151 IDKARDAAREAGLSEDRFMACERGVSFGYN-------------------------------NLVSDMRSLAIMRE-TNAP 198 (288)
T ss_dssp HHHHHHHHHTTTCCSCCEEEEECCEECSSS-------------------------------CEECCHHHHHHGGG-GSSC
T ss_pred HHHHHHcCCCccCCCCcEEEEeCCCCCCCC-------------------------------cCcCCHHHHHHHHh-cCCc
Confidence 3 3343 344443 2222110 11124555666776 6789
Q ss_pred EEEEc-------------cCCCCC--HHHHHHHHHcCCCEEEEcccccc
Q 037779 224 VVHFA-------------AGGVAT--PADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 224 Vv~ia-------------~GGI~t--~~di~~~~~~GadgV~VGsai~~ 257 (310)
|+.-+ ++|-.. +.-...+..+||||+++=.-+.-
T Consensus 199 V~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GadGl~iE~H~~p 247 (288)
T 3tml_A 199 VVFDATHSVQLPGGQGTSSGGQREFVPVLARAAVATGVAGLFMETHPNP 247 (288)
T ss_dssp EEEEHHHHTCCCC--------CTTHHHHHHHHHHHHCCSEEEEEEESSG
T ss_pred EEEcCCcccccCCcccCCCCCchhhHHHHHHHHHHcCCCEEEEeeccCh
Confidence 94211 134221 22345677889999999876653
No 469
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=83.44 E-value=26 Score=31.84 Aligned_cols=63 Identities=10% Similarity=0.132 Sum_probs=36.8
Q ss_pred HHHH-HHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhh------c-CcceEeeccccchHHHHHHHHcCCCe
Q 037779 46 EQAR-IAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSS------V-TIPVMAKARIGHFVEAQILEAIGVDY 117 (310)
Q Consensus 46 ~~a~-~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~------~-~lPv~~kd~i~~~~~~~~~~~aGad~ 117 (310)
++++ .+.++|++.|- . -.+. + .....+.++++++. . +..+..-.+ ....++.+.++|++.
T Consensus 45 ~i~~~~L~~~Gv~~IE-~-------g~~~-~-~~~~~~~v~~~~~~~~~~~~~~~~~i~~l~~--~~~~i~~a~~~g~~~ 112 (337)
T 3ble_A 45 NIAKFLLQKLNVDRVE-I-------ASAR-V-SKGELETVQKIMEWAATEQLTERIEILGFVD--GNKTVDWIKDSGAKV 112 (337)
T ss_dssp HHHHHHHHTTCCSEEE-E-------EETT-S-CTTHHHHHHHHHHHHHHTTCGGGEEEEEESS--TTHHHHHHHHHTCCE
T ss_pred HHHHHHHHHcCCCEEE-E-------eCCC-C-ChhHHHHHHHHHhhhhhhccCCCCeEEEEcc--chhhHHHHHHCCCCE
Confidence 6799 99999999872 2 1111 0 01124677777762 2 223332211 123678888999999
Q ss_pred eee
Q 037779 118 VDE 120 (310)
Q Consensus 118 v~~ 120 (310)
|.+
T Consensus 113 v~i 115 (337)
T 3ble_A 113 LNL 115 (337)
T ss_dssp EEE
T ss_pred EEE
Confidence 873
No 470
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=83.40 E-value=1.9 Score=36.21 Aligned_cols=74 Identities=31% Similarity=0.293 Sum_probs=48.5
Q ss_pred CCCHHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeee
Q 037779 42 VVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVD 119 (310)
Q Consensus 42 ~~~~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~ 119 (310)
+.+++.++.+.+.|++.+..-...|+..+ .| .....++.++++++..++|+++-..+. .+.+..+.++|++.+.
T Consensus 115 ~~t~~e~~~~~~~g~d~i~~~~~~~~~~~--~~-~~~~~~~~l~~l~~~~~~pvia~GGI~-~~nv~~~~~~Ga~gv~ 188 (215)
T 1xi3_A 115 VYSLEEALEAEKKGADYLGAGSVFPTKTK--ED-ARVIGLEGLRKIVESVKIPVVAIGGIN-KDNAREVLKTGVDGIA 188 (215)
T ss_dssp ESSHHHHHHHHHHTCSEEEEECSSCC------C-CCCCHHHHHHHHHHHCSSCEEEESSCC-TTTHHHHHTTTCSEEE
T ss_pred cCCHHHHHHHHhcCCCEEEEcCCccCCCC--CC-CCCcCHHHHHHHHHhCCCCEEEECCcC-HHHHHHHHHcCCCEEE
Confidence 45666677788899999832111222111 11 112347788888888899999988776 4566667789999987
No 471
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=83.37 E-value=8.1 Score=31.31 Aligned_cols=39 Identities=31% Similarity=0.561 Sum_probs=25.4
Q ss_pred HHHHHHHHhcC--CCCEEEEccCCCCCHHHHHHHHHcCCCEEEE
Q 037779 210 YDLVMQTKQLG--RLPVVHFAAGGVATPADAAMMMQLGCDGVFV 251 (310)
Q Consensus 210 ~~l~~~i~~~~--~iPVv~ia~GGI~t~~di~~~~~~GadgV~V 251 (310)
.++++.+++.. ++||++ ||.-..++...+.+.|+|++..
T Consensus 87 ~~~i~~L~~~g~~~i~v~v---GG~~~~~~~~~l~~~G~d~v~~ 127 (161)
T 2yxb_A 87 KRLMAKLRELGADDIPVVL---GGTIPIPDLEPLRSLGIREIFL 127 (161)
T ss_dssp HHHHHHHHHTTCTTSCEEE---EECCCHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHhcCCCCCEEEE---eCCCchhcHHHHHHCCCcEEEC
Confidence 34555565542 578852 5554567777778899998663
No 472
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=83.05 E-value=20 Score=32.88 Aligned_cols=47 Identities=6% Similarity=-0.167 Sum_probs=37.1
Q ss_pred cHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcC-CCEEEEcccccc
Q 037779 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVFK 257 (310)
Q Consensus 209 ~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~G-adgV~VGsai~~ 257 (310)
+++..+.+++..++|| ++.+.+.+++++.++++.| +|.|.+--.-+.
T Consensus 230 d~~~~~~l~~~~~iPI--~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~G 277 (371)
T 2ovl_A 230 DLVGNARIVRESGHTI--AGGENLHTLYDFHNAVRAGSLTLPEPDVSNIG 277 (371)
T ss_dssp CHHHHHHHHHHHCSCE--EECTTCCSHHHHHHHHHHTCCSEECCCTTTTT
T ss_pred cHHHHHHHHhhCCCCE--EeCCCCCCHHHHHHHHHcCCCCEEeeCccccC
Confidence 5677777777667999 5689999999999999864 899888765544
No 473
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=82.68 E-value=14 Score=32.73 Aligned_cols=83 Identities=13% Similarity=0.107 Sum_probs=47.5
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHH-------HHHHhhcCcceEeeccccchHHHHHHHHcCCCee
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLI-------KQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYV 118 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i-------~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v 118 (310)
+.++.+.+.||+.| ++....|-+ |+...+..+.+ +.+++ .++|+++..+- .+-++.+.++||+.|
T Consensus 34 ~~a~~m~~~GAdiI-DIGgeSTRP----ga~~vs~eeE~~Rv~pvi~~l~~-~~v~iSIDT~~--~~Va~~al~aGa~iI 105 (270)
T 4hb7_A 34 NRVKAMIDEGADII-DVGGVSTRP----GHEMVTLEEELNRVLPVVEAIVG-FDVKISVDTFR--SEVAEACLKLGVDMI 105 (270)
T ss_dssp HHHHHHHHTTCSEE-EEESCCCST----TCCCCCHHHHHHHHHHHHHHHTT-SSSEEEEECSC--HHHHHHHHHHTCCEE
T ss_pred HHHHHHHHCCCCEE-EECCccCCC----CCCCCchHHHHHHHHHHHHHhhc-CCCeEEEECCC--HHHHHHHHHhcccee
Confidence 66999999999988 663111111 22112222222 33332 46788776553 356788889999998
Q ss_pred e-ecCCCChhHHHHHHHhc
Q 037779 119 D-ESEVLTPADEENHINKH 136 (310)
Q Consensus 119 ~-~~~~~~~~~~~~~~~~~ 136 (310)
- ++.....++..+.+.++
T Consensus 106 NDVs~g~~d~~m~~~va~~ 124 (270)
T 4hb7_A 106 NDQWAGLYDHRMFQIVAKY 124 (270)
T ss_dssp EETTTTSSCTHHHHHHHHT
T ss_pred ccccccccchhHHHHHHHc
Confidence 6 44333334555555543
No 474
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=82.50 E-value=24 Score=31.35 Aligned_cols=29 Identities=14% Similarity=0.242 Sum_probs=25.3
Q ss_pred CCcEEeecCCHHHHHHHHHhCCCEE-EEec
Q 037779 139 RVPFVCGCRNLGESLRRIREGAAMI-RTKG 167 (310)
Q Consensus 139 ~l~v~~~v~t~~ea~~a~~~Gad~I-~v~g 167 (310)
++++.+++.+++.++.+++.|+++| -++|
T Consensus 80 ~~piSIDT~~~~va~aAl~aGa~iINdvsg 109 (280)
T 1eye_A 80 GITVSIDTMRADVARAALQNGAQMVNDVSG 109 (280)
T ss_dssp TCCEEEECSCHHHHHHHHHTTCCEEEETTT
T ss_pred CCEEEEeCCCHHHHHHHHHcCCCEEEECCC
Confidence 7899999999999999999999988 4544
No 475
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=82.46 E-value=15 Score=34.06 Aligned_cols=45 Identities=9% Similarity=-0.018 Sum_probs=35.2
Q ss_pred cHHHHHHHHhcC-CCCEEEEccCCCCCHHHHHHHHHcC-CCEEEEccccc
Q 037779 209 PYDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVF 256 (310)
Q Consensus 209 ~~~l~~~i~~~~-~iPVv~ia~GGI~t~~di~~~~~~G-adgV~VGsai~ 256 (310)
+++..+.+++.. ++|| ++.+.+ +++++.++++.| +|.|.+...|.
T Consensus 231 ~~~~~~~l~~~~~~iPI--a~dE~~-~~~~~~~~i~~~~~d~v~ikGGit 277 (389)
T 2oz8_A 231 DHDGLRTLRHAVTWTQI--NSGEYL-DLQGKRLLLEAHAADILNVHGQVT 277 (389)
T ss_dssp CHHHHHHHHHHCCSSEE--EECTTC-CHHHHHHHHHTTCCSEEEECSCHH
T ss_pred CHHHHHHHHhhCCCCCE--EeCCCC-CHHHHHHHHHcCCCCEEEECcCHH
Confidence 566777777766 7898 567888 999999999875 89999973343
No 476
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=82.44 E-value=12 Score=33.69 Aligned_cols=141 Identities=13% Similarity=0.121 Sum_probs=77.6
Q ss_pred ChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeeeecC-CCChhHHHHHHHhcCCCCcEEeec---CCHHHHHHH
Q 037779 80 DPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVDESE-VLTPADEENHINKHNFRVPFVCGC---RNLGESLRR 155 (310)
Q Consensus 80 ~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~~~~-~~~~~~~~~~~~~~~~~l~v~~~v---~t~~ea~~a 155 (310)
-+..++++++..++|++--.+ +...++.+.+. +|.+-+.+ .....++.+.+.+ .+.++++.. .|++|.+.+
T Consensus 100 GL~~L~~~~~e~GLpv~Tev~--D~~~v~~l~~~-vd~lkIgA~~~~n~~LLr~va~--~gkPVilK~Gms~t~~ei~~a 174 (298)
T 3fs2_A 100 ALEVFSDLKKEYGFPVLTDIH--TEEQCAAVAPV-VDVLQIPAFLCRQTDLLIAAAR--TGRVVNVKKGQFLAPWDMKNV 174 (298)
T ss_dssp HHHHHHHHHHHHCCCEEEECC--SHHHHHHHTTT-CSEEEECGGGTTCHHHHHHHHH--TTSEEEEECCTTCCGGGHHHH
T ss_pred HHHHHHHHHHhcCCeEEEEeC--CHHHHHHHHhh-CCEEEECccccCCHHHHHHHHc--cCCcEEEeCCCCCCHHHHHHH
Confidence 356677888888999975433 33455666666 88876442 2334456665654 467777764 266665544
Q ss_pred H----HhCCC-EEEEe-cCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEEEc-
Q 037779 156 I----REGAA-MIRTK-GEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFA- 228 (310)
Q Consensus 156 ~----~~Gad-~I~v~-g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~ia- 228 (310)
+ +.|.+ ++-.+ |..|+.+ +...+...+..+++ .++||+.-+
T Consensus 175 ve~i~~~Gn~~iiL~erg~~y~~~-------------------------------~~~vdl~~i~~lk~-~~~PV~~D~s 222 (298)
T 3fs2_A 175 LAKITESGNPNVLATERGVSFGYN-------------------------------TLVSDMRALPIMAG-LGAPVIFDAT 222 (298)
T ss_dssp HHHHHTTTCCCEEEEECCEECSSS-------------------------------CEECCTTHHHHHHT-TTSCEEEEHH
T ss_pred HHHHHHcCCCeEEEEECCCCCCCC-------------------------------CCccCHHHHHHHHH-cCCcEEEcCC
Confidence 4 34654 44333 2222111 00113334556666 578995311
Q ss_pred ------------cCCCCC--HHHHHHHHHcCCCEEEEcccccc
Q 037779 229 ------------AGGVAT--PADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 229 ------------~GGI~t--~~di~~~~~~GadgV~VGsai~~ 257 (310)
++|... +.-...+..+||||+++=.-+.-
T Consensus 223 Hsvq~p~~~~~~s~G~r~~v~~~a~AAvAlGAdGl~IE~H~tp 265 (298)
T 3fs2_A 223 HSVQQPGGQGGSTGGQREFVETLARAAVAVGVAGFFIETHEDP 265 (298)
T ss_dssp HHTCCCC--------CGGGHHHHHHHHHHHCCSEEEEEEESSG
T ss_pred CccccCCcccCCCCCchhhHHHHHHHHHHcCCCEEEEEecCCh
Confidence 134211 22345667889999999776653
No 477
>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*
Probab=82.44 E-value=23 Score=30.42 Aligned_cols=170 Identities=8% Similarity=0.028 Sum_probs=85.9
Q ss_pred hHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeeeecCC-CChhHHHHHHHh--cCCCCcEEeecCCHHHH---HH
Q 037779 81 PQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVDESEV-LTPADEENHINK--HNFRVPFVCGCRNLGES---LR 154 (310)
Q Consensus 81 ~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~~~~~-~~~~~~~~~~~~--~~~~l~v~~~v~t~~ea---~~ 154 (310)
.+.++.+++. ++||++-......+....+.++||+..+.-.. .........+.. ....+.+++-=.+.... ..
T Consensus 64 ~~~~~~lr~~-~~pvi~lt~~~~~~~~~~a~~~Ga~dyl~Kp~~~~~~~~~~~~~~~~~~~~~~ILivDD~~~~~~~l~~ 142 (259)
T 3luf_A 64 GEAVKVLLER-GLPVVILTADISEDKREAWLEAGVLDYVMKDSRHSLQYAVGLVHRLYLNQQIEVLVVDDSRTSRHRTMA 142 (259)
T ss_dssp SHHHHHHHHT-TCCEEEEECC-CHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred HHHHHHHHhC-CCCEEEEEccCCHHHHHHHHHCCCcEEEeCCchhHHHHHHHhhhhHhhcCCCcEEEEeCCHHHHHHHHH
Confidence 5678888764 68988765544445566778899988653221 011112222211 01123333322232211 12
Q ss_pred HH-HhCCCEEEEecCCCCCchHHHHHHHHHhh-cceecccccCchhHHhhhccCCCcHHHHHHHHhc---CCCCEEEEcc
Q 037779 155 RI-REGAAMIRTKGEAGTGNIVEAVRHVRSVM-GDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQL---GRLPVVHFAA 229 (310)
Q Consensus 155 a~-~~Gad~I~v~g~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~---~~iPVv~ia~ 229 (310)
.. ..|..+.... +..++++..++.. .|+..+...-+ -...+++++.+++. ..+||+++
T Consensus 143 ~L~~~~~~v~~a~------~~~eal~~l~~~~~~dlvllD~~mP---------~~dG~~l~~~lr~~~~~~~~~ii~~-- 205 (259)
T 3luf_A 143 QLRKQLLQVHEAS------HAREALATLEQHPAIRLVLVDYYMP---------EIDGISLVRMLRERYSKQQLAIIGI-- 205 (259)
T ss_dssp HHHTTTCEEEEES------SHHHHHHHHHHCTTEEEEEECSCCS---------SSCHHHHHHHHHHHCCTTTSEEEEE--
T ss_pred HHHHcCcEEEEeC------CHHHHHHHHhcCCCCCEEEEcCCCC---------CCCHHHHHHHHHhccCCCCCeEEEE--
Confidence 22 2343332221 3345665554432 23221111000 02247788888764 25788644
Q ss_pred CCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHH
Q 037779 230 GGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVT 273 (310)
Q Consensus 230 GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~ 273 (310)
.+-.+.+...+++++||+++ |.++-++.+....+...++
T Consensus 206 s~~~~~~~~~~a~~~Ga~~y-----l~KP~~~~~L~~~i~~~l~ 244 (259)
T 3luf_A 206 SVSDKRGLSARYLKQGANDF-----LNQPFEPEELQCRVSHNLE 244 (259)
T ss_dssp ECSSSSSHHHHHHHTTCSEE-----EESSCCHHHHHHHHHHHHH
T ss_pred EccCCHHHHHHHHhcChhhe-----EcCCCCHHHHHHHHHHHHH
Confidence 44456788889999999987 5566666665555555444
No 478
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=82.41 E-value=12 Score=30.97 Aligned_cols=85 Identities=19% Similarity=0.262 Sum_probs=54.5
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeee-ec--
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVD-ES-- 121 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~-~~-- 121 (310)
.+.++.+...|+..+. + ++. ...|...-...+.+++++...++|++....+...+....+.+.|++.++ .+
T Consensus 133 ~~~i~~~~~~~~~~vl-i----~~~-~~~g~~~g~~~~~i~~~~~~~~~Pvia~~g~~~~~~~~~~~~~G~~~~~vg~a~ 206 (237)
T 3cwo_X 133 RDWVVEVEKRGAGEIL-L----TSI-DRDGTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADAALAASVF 206 (237)
T ss_dssp HHHHHHHHHHTCSEEE-E----EET-TTTTCCSCCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHHTCSEEEESHHH
T ss_pred HHHHHHHhhcCCCeEE-E----Eec-CCCCccccccHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcCcHHHhhhHHH
Confidence 4778888888888652 2 222 1112211123778999998899999998777765666677779999986 32
Q ss_pred --CCCChhHHHHHHHh
Q 037779 122 --EVLTPADEENHINK 135 (310)
Q Consensus 122 --~~~~~~~~~~~~~~ 135 (310)
....+.++.+.+++
T Consensus 207 ~~~~~~~~~~~~~l~~ 222 (237)
T 3cwo_X 207 HFREIDVRELKEYLKK 222 (237)
T ss_dssp HTTSSCHHHHHHHHHT
T ss_pred HcCCCCHHHHHHHHHH
Confidence 22344555555544
No 479
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=82.23 E-value=14 Score=27.76 Aligned_cols=59 Identities=17% Similarity=0.224 Sum_probs=39.4
Q ss_pred cHHHHHHHHhc---CCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHc
Q 037779 209 PYDLVMQTKQL---GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTN 274 (310)
Q Consensus 209 ~~~l~~~i~~~---~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~ 274 (310)
..++++.+++. .++|++++ .+-.+.+...++++.|+++++. ++-++....+.+...++.
T Consensus 77 g~~~~~~l~~~~~~~~~~ii~~--t~~~~~~~~~~~~~~g~~~~l~-----kP~~~~~l~~~i~~~~~~ 138 (149)
T 1k66_A 77 GREVLQEIKQDEVLKKIPVVIM--TTSSNPKDIEICYSYSISSYIV-----KPLEIDRLTETVQTFIKY 138 (149)
T ss_dssp HHHHHHHHTTSTTGGGSCEEEE--ESCCCHHHHHHHHHTTCSEEEE-----CCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCcccCCCeEEEE--eCCCCHHHHHHHHHCCCCEEEe-----CCCCHHHHHHHHHHHHHH
Confidence 35677777664 46898755 4445688999999999999854 444555555555555543
No 480
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=81.68 E-value=13 Score=32.97 Aligned_cols=114 Identities=18% Similarity=0.147 Sum_probs=59.9
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHH---HHHHHhh---cCcceEeeccccc---------------
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQL---IKQIKSS---VTIPVMAKARIGH--------------- 103 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~---i~~i~~~---~~lPv~~kd~i~~--------------- 103 (310)
.+.++.+.++|+.++ .++ |.....|..+.+-.+. |+.+++. .++|+.++.+...
T Consensus 95 ~~~v~~l~~aGaagv-~iE----D~~~~~~k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~~~~~~~~ 169 (275)
T 2ze3_A 95 RRTVEHFAALGVAGV-NLE----DATGLTPTELYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGATDEERLAE 169 (275)
T ss_dssp HHHHHHHHHTTCSEE-EEE----CBCSSSSSCBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSSHHHHHHH
T ss_pred HHHHHHHHHcCCcEE-EEC----CCcCCCCCccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhccccccchhhHHH
Confidence 367999999999998 453 2210011111222233 4444433 2578777544321
Q ss_pred -hHHHHHHHHcCCCeeeecCCCChhHHHHHHHhcCCCCcEEeecCC-HHHHHHHHHhCCCEEEE
Q 037779 104 -FVEAQILEAIGVDYVDESEVLTPADEENHINKHNFRVPFVCGCRN-LGESLRRIREGAAMIRT 165 (310)
Q Consensus 104 -~~~~~~~~~aGad~v~~~~~~~~~~~~~~~~~~~~~l~v~~~v~t-~~ea~~a~~~Gad~I~v 165 (310)
.+.++.+.++|||.|......+.+++.+..+.. .+++.+.+.+ .-......++|...+..
T Consensus 170 ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~--~~P~n~~~~~~~~~~~eL~~lGv~~v~~ 231 (275)
T 2ze3_A 170 TVRRGQAYADAGADGIFVPLALQSQDIRALADAL--RVPLNVMAFPGSPVPRALLDAGAARVSF 231 (275)
T ss_dssp HHHHHHHHHHTTCSEEECTTCCCHHHHHHHHHHC--SSCEEEECCTTSCCHHHHHHTTCSEEEC
T ss_pred HHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHhc--CCCEEEecCCCCCCHHHHHHcCCcEEEE
Confidence 135567778999999754443344454444442 2443332211 11234556779888775
No 481
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=81.36 E-value=5.7 Score=35.84 Aligned_cols=63 Identities=16% Similarity=0.188 Sum_probs=37.1
Q ss_pred HHHHHHHhc--CCCCEEEEccCCCCCHHHH---HHHHHcCCCEEEEccccccC--CCHHHHHHHHHHHHHc
Q 037779 211 DLVMQTKQL--GRLPVVHFAAGGVATPADA---AMMMQLGCDGVFVGSGVFKS--GDPVRRARAIVQAVTN 274 (310)
Q Consensus 211 ~l~~~i~~~--~~iPVv~ia~GGI~t~~di---~~~~~~GadgV~VGsai~~~--~dp~~~~~~~~~~~~~ 274 (310)
++++.+.+. .++||++ -.|+.++.+.+ +.+.++|||++++..-.|.. .+.....+-|....++
T Consensus 71 ~v~~~~~~~~~gr~pvia-Gvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a 140 (307)
T 3s5o_A 71 EVVSRVRQAMPKNRLLLA-GSGCESTQATVEMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADL 140 (307)
T ss_dssp HHHHHHHHTSCTTSEEEE-ECCCSSHHHHHHHHHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCcEEE-ecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhh
Confidence 445555553 4789852 34445443333 34446899999999888763 4555555555544443
No 482
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=81.03 E-value=3.2 Score=43.78 Aligned_cols=89 Identities=24% Similarity=0.248 Sum_probs=57.8
Q ss_pred ccceeeecCCccccCCC-HHHHHHHHHcCCcEEEecccc------cc----------hhh-hcC---CCCC-CCChHHHH
Q 037779 28 VGLAQMLRGGVIMDVVT-PEQARIAEEAGACAVMALERV------PA----------DIR-AQG---GVAR-MSDPQLIK 85 (310)
Q Consensus 28 ~~~~~~l~~g~i~~~~~-~~~a~~~~~~Ga~~I~~l~~~------~~----------d~r-~~~---G~~~-~~~~~~i~ 85 (310)
.|+..+++.+ ..+ .++++.+.++|+++|+..|.. .. ..+ ..+ |... ....+.++
T Consensus 704 ~Pv~vK~~~~----~~~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~ 779 (1025)
T 1gte_A 704 IPFFAKLTPN----VTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVT 779 (1025)
T ss_dssp SCEEEEECSC----SSCHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHH
T ss_pred CceEEEeCCC----hHHHHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHH
Confidence 4556666542 234 578999999999999764410 00 000 111 1100 00035688
Q ss_pred HHHhhc-CcceEeeccccchHHHHHHHHcCCCeeee
Q 037779 86 QIKSSV-TIPVMAKARIGHFVEAQILEAIGVDYVDE 120 (310)
Q Consensus 86 ~i~~~~-~lPv~~kd~i~~~~~~~~~~~aGad~v~~ 120 (310)
++++.+ ++||+....|.+.+++..+.++|||.|.+
T Consensus 780 ~v~~~~~~ipvi~~GGI~s~~da~~~l~~Ga~~v~v 815 (1025)
T 1gte_A 780 TIARALPGFPILATGGIDSAESGLQFLHSGASVLQV 815 (1025)
T ss_dssp HHHHHSTTCCEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHcCCCCEEEecCcCCHHHHHHHHHcCCCEEEE
Confidence 888888 89999999998878888788899999873
No 483
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=81.01 E-value=4.7 Score=34.82 Aligned_cols=88 Identities=15% Similarity=-0.028 Sum_probs=55.4
Q ss_pred ccccchHHHHHHHHcCCCeeee-----cCC--C-ChhHHHHHHHhc-CCCCcEEe--ecCCHH-HHHHHHHhCCCEEEEe
Q 037779 99 ARIGHFVEAQILEAIGVDYVDE-----SEV--L-TPADEENHINKH-NFRVPFVC--GCRNLG-ESLRRIREGAAMIRTK 166 (310)
Q Consensus 99 d~i~~~~~~~~~~~aGad~v~~-----~~~--~-~~~~~~~~~~~~-~~~l~v~~--~v~t~~-ea~~a~~~Gad~I~v~ 166 (310)
|+..-.+.++.+.++|+|.++. +.. + --..+++.++++ +..+++-+ -+.+++ .++.+.++|+|++.++
T Consensus 15 D~~~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~~~~~~~dvhLmv~~p~~~i~~~~~aGad~itvH 94 (228)
T 3ovp_A 15 DLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFH 94 (228)
T ss_dssp CGGGHHHHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHHCSSSCEEEEEECSCGGGGHHHHHHHTCSEEEEE
T ss_pred CchhHHHHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhhCCCCcEEEEEEeCCHHHHHHHHHHcCCCEEEEc
Confidence 4433235677888899998873 211 1 123566777665 24444443 245554 3556778999999999
Q ss_pred cCCCCCchHHHHHHHHHhhcc
Q 037779 167 GEAGTGNIVEAVRHVRSVMGD 187 (310)
Q Consensus 167 g~~~~~~~~~~~~~~~~~~~~ 187 (310)
.+... +..+.++++++.+..
T Consensus 95 ~Ea~~-~~~~~i~~i~~~G~k 114 (228)
T 3ovp_A 95 LEATE-NPGALIKDIRENGMK 114 (228)
T ss_dssp GGGCS-CHHHHHHHHHHTTCE
T ss_pred cCCch-hHHHHHHHHHHcCCC
Confidence 76443 567788888887665
No 484
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=80.74 E-value=12 Score=34.65 Aligned_cols=45 Identities=11% Similarity=-0.051 Sum_probs=37.2
Q ss_pred cHHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcC-CCEEEEcccc
Q 037779 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGV 255 (310)
Q Consensus 209 ~~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~G-adgV~VGsai 255 (310)
+++..+.+++..++|| ++.+.+.+++++.++++.| +|.|.+--.-
T Consensus 247 d~~~~~~l~~~~~iPI--~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~ 292 (388)
T 2nql_A 247 DIAGLEKVSKNTDVPI--AVGEEWRTHWDMRARIERCRIAIVQPEMGH 292 (388)
T ss_dssp CHHHHHHHHTSCCSCE--EECTTCCSHHHHHHHHTTSCCSEECCCHHH
T ss_pred hHHHHHHHHhhCCCCE--EEeCCcCCHHHHHHHHHcCCCCEEEecCCC
Confidence 5778888888778999 5689999999999999875 8998885544
No 485
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=80.56 E-value=28 Score=30.44 Aligned_cols=109 Identities=15% Similarity=0.090 Sum_probs=60.3
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEe-eccccchHHHHHHHHcCCCeee-ec-
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMA-KARIGHFVEAQILEAIGVDYVD-ES- 121 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~-kd~i~~~~~~~~~~~aGad~v~-~~- 121 (310)
.++++.+.++|++++... ..+.+. ..+.++.+++ .++.++. -......+.++.+.+.+..++. .+
T Consensus 112 ~~~~~~~~~aGadgii~~-d~~~e~----------~~~~~~~~~~-~g~~~i~l~~p~t~~~~i~~i~~~~~g~v~~~s~ 179 (268)
T 1qop_A 112 DAFYARCEQVGVDSVLVA-DVPVEE----------SAPFRQAALR-HNIAPIFICPPNADDDLLRQVASYGRGYTYLLSR 179 (268)
T ss_dssp HHHHHHHHHHTCCEEEET-TCCGGG----------CHHHHHHHHH-TTCEEECEECTTCCHHHHHHHHHHCCSCEEEESS
T ss_pred HHHHHHHHHcCCCEEEEc-CCCHHH----------HHHHHHHHHH-cCCcEEEEECCCCCHHHHHHHHhhCCCcEEEEec
Confidence 478999999999998433 111110 1334444443 3443211 1111122444455554444443 11
Q ss_pred C-------C--CChhHHHHHHHhcCCCCcEEe--ecCCHHHHHHHHHhCCCEEEEe
Q 037779 122 E-------V--LTPADEENHINKHNFRVPFVC--GCRNLGESLRRIREGAAMIRTK 166 (310)
Q Consensus 122 ~-------~--~~~~~~~~~~~~~~~~l~v~~--~v~t~~ea~~a~~~Gad~I~v~ 166 (310)
. . .+..+.++.+++.. ++++.+ +++|++.+.++...|||.+.+.
T Consensus 180 ~G~tG~~~~~~~~~~~~i~~lr~~~-~~pi~vggGI~t~e~~~~~~~agAD~vVVG 234 (268)
T 1qop_A 180 SGVTGAENRGALPLHHLIEKLKEYH-AAPALQGFGISSPEQVSAAVRAGAAGAISG 234 (268)
T ss_dssp SSCCCSSSCC--CCHHHHHHHHHTT-CCCEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred CCcCCCccCCCchHHHHHHHHHhcc-CCcEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 1 1 11246667776632 455555 5899999999999999999885
No 486
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=80.49 E-value=25 Score=31.41 Aligned_cols=94 Identities=9% Similarity=0.017 Sum_probs=60.0
Q ss_pred CCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHh
Q 037779 139 RVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQ 218 (310)
Q Consensus 139 ~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~ 218 (310)
+..++.++.|.--++.+.+.|.+.+.+.+...+ +. ++. .+...++-+. -....+.+.+
T Consensus 15 ~~i~~~~a~D~~sA~~~~~aG~~ai~vs~~~~a--------~~--~G~--pD~~~vt~~e----------m~~~~~~I~~ 72 (290)
T 2hjp_A 15 RLFTAMAAHNPLVAKLAEQAGFGGIWGSGFELS--------AS--YAV--PDANILSMST----------HLEMMRAIAS 72 (290)
T ss_dssp CCEEEEECSSHHHHHHHHHHTCSEEEECHHHHH--------HH--TTS--CTTTCSCHHH----------HHHHHHHHHT
T ss_pred CcEEEecCCCHHHHHHHHHcCCCEEEEChHHHH--------Hh--CCC--CCCCCCCHHH----------HHHHHHHHHh
Confidence 467888999999999999999999988642100 00 000 0100111111 1334455555
Q ss_pred cCCCCEEEEccCCCCCHHHH----HHHHHcCCCEEEEccc
Q 037779 219 LGRLPVVHFAAGGVATPADA----AMMMQLGCDGVFVGSG 254 (310)
Q Consensus 219 ~~~iPVv~ia~GGI~t~~di----~~~~~~GadgV~VGsa 254 (310)
..++||++-...|-++++++ .+++++|++||-+=-.
T Consensus 73 ~~~~PviaD~d~Gyg~~~~~~~~v~~l~~aGa~gv~iED~ 112 (290)
T 2hjp_A 73 TVSIPLIADIDTGFGNAVNVHYVVPQYEAAGASAIVMEDK 112 (290)
T ss_dssp TCSSCEEEECTTTTSSHHHHHHHHHHHHHHTCSEEEEECB
T ss_pred cCCCCEEEECCCCCCCHHHHHHHHHHHHHhCCeEEEEcCC
Confidence 56899988888887787664 5677899999987443
No 487
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=80.37 E-value=15 Score=26.88 Aligned_cols=56 Identities=9% Similarity=0.199 Sum_probs=38.4
Q ss_pred HHHHHHHHhcCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHH
Q 037779 210 YDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAV 272 (310)
Q Consensus 210 ~~l~~~i~~~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~ 272 (310)
.++++.+++..++|++++ .+-.+.+...++++.|+++++. ++-++.+....+...+
T Consensus 62 ~~~~~~lr~~~~~~ii~~--t~~~~~~~~~~~~~~ga~~~l~-----KP~~~~~l~~~i~~~l 117 (120)
T 3f6p_A 62 VEVCREVRKKYDMPIIML--TAKDSEIDKVIGLEIGADDYVT-----KPFSTRELLARVKANL 117 (120)
T ss_dssp HHHHHHHHTTCCSCEEEE--EESSCHHHHHHHHHTTCCEEEE-----ESCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCEEEE--ECCCChHHHHHHHhCCcceeEc-----CCCCHHHHHHHHHHHH
Confidence 567777776567898765 3334678888999999998854 5556665555555444
No 488
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=80.24 E-value=15 Score=33.98 Aligned_cols=109 Identities=16% Similarity=0.232 Sum_probs=0.0
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhc-CcceEeeccccch-----HHHHHHHHcCCCeee
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSV-TIPVMAKARIGHF-----VEAQILEAIGVDYVD 119 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~-~lPv~~kd~i~~~-----~~~~~~~~aGad~v~ 119 (310)
+.++.+.+.|++.+ +-+.|.......+.++++|+.+ ++|+.+...-++. +.++.+.++|++.+-
T Consensus 153 ~~a~~~~~~Gf~~i----------Kik~g~~~~~~~e~v~avr~a~gd~~l~vD~n~~~~~~~a~~~~~~l~~~~i~~iE 222 (384)
T 2pgw_A 153 RDAAVGHAQGERVF----------YLKVGRGEKLDLEITAAVRGEIGDARLRLDANEGWSVHDAINMCRKLEKYDIEFIE 222 (384)
T ss_dssp HHHHHHHHTTCCEE----------EEECCSCHHHHHHHHHHHHTTSTTCEEEEECTTCCCHHHHHHHHHHHGGGCCSEEE
T ss_pred HHHHHHHHcCCCEE----------EECcCCCHHHHHHHHHHHHHHcCCcEEEEecCCCCCHHHHHHHHHHHHhcCCCEEe
Q ss_pred ecCCCChhHHHHHHHhcCCCCcEEee--cCCHHHHHHHHHhCC-CEEEE
Q 037779 120 ESEVLTPADEENHINKHNFRVPFVCG--CRNLGESLRRIREGA-AMIRT 165 (310)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~l~v~~~--v~t~~ea~~a~~~Ga-d~I~v 165 (310)
.+-.....+..+.+++. .++++..+ +.+.++++++++.|+ |++.+
T Consensus 223 qP~~~~~~~~~~~l~~~-~~iPI~~de~i~~~~~~~~~i~~~~~d~v~i 270 (384)
T 2pgw_A 223 QPTVSWSIPAMAHVREK-VGIPIVADQAAFTLYDVYEICRQRAADMICI 270 (384)
T ss_dssp CCSCTTCHHHHHHHHHH-CSSCEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred CCCChhhHHHHHHHHhh-CCCCEEEeCCcCCHHHHHHHHHcCCCCEEEE
No 489
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=80.01 E-value=18 Score=27.59 Aligned_cols=60 Identities=13% Similarity=0.176 Sum_probs=42.1
Q ss_pred cHHHHHHHHhc-CCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHcC
Q 037779 209 PYDLVMQTKQL-GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTNY 275 (310)
Q Consensus 209 ~~~l~~~i~~~-~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~~ 275 (310)
..++++.+++. ..+||+++ ++-.+.+.+.+++++|+++++. ++-++......+...+...
T Consensus 76 g~~~~~~l~~~~~~~~ii~~--s~~~~~~~~~~~~~~g~~~~l~-----Kp~~~~~l~~~i~~~~~~~ 136 (152)
T 3eul_A 76 GAQVAAAVRSYELPTRVLLI--SAHDEPAIVYQALQQGAAGFLL-----KDSTRTEIVKAVLDCAKGR 136 (152)
T ss_dssp HHHHHHHHHHTTCSCEEEEE--ESCCCHHHHHHHHHTTCSEEEE-----TTCCHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHhcCCCCeEEEE--EccCCHHHHHHHHHcCCCEEEe-----cCCCHHHHHHHHHHHHcCC
Confidence 35677777664 46788754 4445788899999999999855 5556666666676666654
No 490
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=79.95 E-value=10 Score=34.97 Aligned_cols=74 Identities=16% Similarity=0.125 Sum_probs=55.6
Q ss_pred CCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHHhhcceecccccCchhHHhhhccCCCcHHHHHHH
Q 037779 137 NFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQT 216 (310)
Q Consensus 137 ~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i 216 (310)
..|+.++.++-+.+.+....+.|++++++... + -.++.+++.+
T Consensus 89 ~~Gi~~~st~fD~~svd~l~~~~v~~~KI~S~----~---------------------------------~~N~pLL~~v 131 (350)
T 3g8r_A 89 ANGFKAICTPFDEESVDLIEAHGIEIIKIASC----S---------------------------------FTDWPLLERI 131 (350)
T ss_dssp HTTCEEEEEECSHHHHHHHHHTTCCEEEECSS----S---------------------------------TTCHHHHHHH
T ss_pred HcCCcEEeccCCHHHHHHHHHcCCCEEEECcc----c---------------------------------ccCHHHHHHH
Confidence 36899999999999999988999999998521 1 1256788888
Q ss_pred HhcCCCCEEEEccCCCCCHHHHHHHHH----cCCCEEE
Q 037779 217 KQLGRLPVVHFAAGGVATPADAAMMMQ----LGCDGVF 250 (310)
Q Consensus 217 ~~~~~iPVv~ia~GGI~t~~di~~~~~----~GadgV~ 250 (310)
.+ ...||+ .+=|.+|.+++..+.+ .|.+-++
T Consensus 132 a~-~gKPvi--LstGmstl~Ei~~Ave~i~~~g~~viL 166 (350)
T 3g8r_A 132 AR-SDKPVV--ASTAGARREDIDKVVSFMLHRGKDLTI 166 (350)
T ss_dssp HT-SCSCEE--EECTTCCHHHHHHHHHHHHTTTCCEEE
T ss_pred Hh-hCCcEE--EECCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 76 467995 4777789999877654 4766444
No 491
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=79.83 E-value=17 Score=27.32 Aligned_cols=59 Identities=15% Similarity=0.178 Sum_probs=39.9
Q ss_pred cHHHHHHHHh---cCCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCC-CHHHHHHHHHHHHHc
Q 037779 209 PYDLVMQTKQ---LGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSG-DPVRRARAIVQAVTN 274 (310)
Q Consensus 209 ~~~l~~~i~~---~~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~-dp~~~~~~~~~~~~~ 274 (310)
..++++.+++ ...+|++++ .+-.+.+.+.++++.|+++++. ++- ++....+.+...++.
T Consensus 66 g~~~~~~lr~~~~~~~~pii~~--s~~~~~~~~~~~~~~ga~~~l~-----Kp~~~~~~l~~~i~~~l~~ 128 (144)
T 3kht_A 66 GFEVMSAVRKPGANQHTPIVIL--TDNVSDDRAKQCMAAGASSVVD-----KSSNNVTDFYGRIYAIFSY 128 (144)
T ss_dssp HHHHHHHHHSSSTTTTCCEEEE--ETTCCHHHHHHHHHTTCSEEEE-----CCTTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccccCCCEEEE--eCCCCHHHHHHHHHcCCCEEEE-----CCCCcHHHHHHHHHHHHHH
Confidence 4667777776 246899755 4445789999999999999754 444 555555555555543
No 492
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=79.36 E-value=24 Score=32.08 Aligned_cols=111 Identities=20% Similarity=0.271 Sum_probs=66.4
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhc--CcceEeecccc-ch----HHHHHHHHcCCCee
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSV--TIPVMAKARIG-HF----VEAQILEAIGVDYV 118 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~--~lPv~~kd~i~-~~----~~~~~~~~aGad~v 118 (310)
+.++.+.+.|++.+ -++ ...++ .....+.++++|+.+ ++|+.+...-+ +. +.++.+.++|++.+
T Consensus 150 ~~a~~~~~~Gf~~i-Kik-------~g~~~-~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i 220 (359)
T 1mdl_A 150 ERAVTAAELGFRAV-KTR-------IGYPA-LDQDLAVVRSIRQAVGDDFGIMVDYNQSLDVPAAIKRSQALQQEGVTWI 220 (359)
T ss_dssp HHHHHHHHTTCSEE-EEE-------CCCSS-HHHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHHHHTCSCE
T ss_pred HHHHHHHHcCCCEE-EEe-------cCCCC-HHHHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHHhCCCeE
Confidence 45777888999987 331 10001 011256788888876 67887653322 11 23456677899988
Q ss_pred eecCCCChhHHHHHHHhcCCCCcEEee--cCCHHHHHHHHHhC-CCEEEEe
Q 037779 119 DESEVLTPADEENHINKHNFRVPFVCG--CRNLGESLRRIREG-AAMIRTK 166 (310)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~l~v~~~--v~t~~ea~~a~~~G-ad~I~v~ 166 (310)
-.+-.....+..+.+++ ..++++..+ +.|.+++++.++.+ +|++.+.
T Consensus 221 E~P~~~~~~~~~~~l~~-~~~iPI~~de~~~~~~~~~~~i~~~~~d~v~ik 270 (359)
T 1mdl_A 221 EEPTLQHDYEGHQRIQS-KLNVPVQMGENWLGPEEMFKALSIGACRLAMPD 270 (359)
T ss_dssp ECCSCTTCHHHHHHHHH-TCSSCEEECTTCCSHHHHHHHHHTTCCSEECCB
T ss_pred ECCCChhhHHHHHHHHH-hCCCCEEeCCCCCCHHHHHHHHHcCCCCEEeec
Confidence 54321112233344444 246787774 78899999988776 5888765
No 493
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=79.30 E-value=17 Score=26.86 Aligned_cols=58 Identities=16% Similarity=0.135 Sum_probs=38.3
Q ss_pred cHHHHHHHHhc---CCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHH
Q 037779 209 PYDLVMQTKQL---GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVT 273 (310)
Q Consensus 209 ~~~l~~~i~~~---~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~ 273 (310)
..++++.+++. .++|++++ .+-.+.+...++++.|+++++. ++-++....+.+...++
T Consensus 70 g~~~~~~l~~~~~~~~~pii~l--s~~~~~~~~~~~~~~g~~~~l~-----kP~~~~~l~~~i~~~~~ 130 (140)
T 1k68_A 70 GREVLAEIKSDPTLKRIPVVVL--STSINEDDIFHSYDLHVNCYIT-----KSANLSQLFQIVKGIEE 130 (140)
T ss_dssp HHHHHHHHHHSTTGGGSCEEEE--ESCCCHHHHHHHHHTTCSEEEE-----CCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCcccccccEEEE--ecCCcHHHHHHHHHhchhheec-----CCCCHHHHHHHHHHHHH
Confidence 35667777664 46898755 4444688999999999998754 44455555555555444
No 494
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=79.28 E-value=6.2 Score=33.82 Aligned_cols=84 Identities=12% Similarity=0.137 Sum_probs=52.2
Q ss_pred HHHHHHHhhc--CcceEeeccccchHHHHHHHHcCCCeee-----ecCC-CC----hhHHHHHHHhcCCCC-cEEeecCC
Q 037779 82 QLIKQIKSSV--TIPVMAKARIGHFVEAQILEAIGVDYVD-----ESEV-LT----PADEENHINKHNFRV-PFVCGCRN 148 (310)
Q Consensus 82 ~~i~~i~~~~--~lPv~~kd~i~~~~~~~~~~~aGad~v~-----~~~~-~~----~~~~~~~~~~~~~~l-~v~~~v~t 148 (310)
+-++.++... ++++-+-..+ ...++..+..+||++|. ..+. .+ ..++.+.++.+++.. .+.+++++
T Consensus 90 eGl~A~~~L~~~GI~vn~Tlif-S~~Qa~~Aa~AGa~yISPfvgRi~d~~~dG~~~v~~i~~~~~~~~~~t~ilaAS~R~ 168 (212)
T 3r8r_A 90 DGLKAVRALTDLGIKTNVTLIF-NANQALLAARAGATYVSPFLGRLDDIGHNGLDLISEVKQIFDIHGLDTQIIAASIRH 168 (212)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEC-SHHHHHHHHHHTCSEEEEBHHHHHHTTSCHHHHHHHHHHHHHHHTCCCEEEEBSCCS
T ss_pred HHHHHHHHHHHCCCcEEEEEeC-CHHHHHHHHHcCCeEEEeccchhhhcCCChHHHHHHHHHHHHHcCCCCEEEEecCCC
Confidence 3444444332 4554333222 33566667779999985 1111 12 235555556666664 45668999
Q ss_pred HHHHHHHHHhCCCEEEEe
Q 037779 149 LGESLRRIREGAAMIRTK 166 (310)
Q Consensus 149 ~~ea~~a~~~Gad~I~v~ 166 (310)
+.++..+..+|||++.+.
T Consensus 169 ~~~v~~~a~~G~d~~Tip 186 (212)
T 3r8r_A 169 PQHVTEAALRGAHIGTMP 186 (212)
T ss_dssp HHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEcC
Confidence 999999999999999874
No 495
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=79.23 E-value=1.8 Score=40.23 Aligned_cols=61 Identities=21% Similarity=0.170 Sum_probs=46.2
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHHHHHHcC-CCeeee
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIG-VDYVDE 120 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aG-ad~v~~ 120 (310)
++++.++++|++.|.+.++ .. | .+.++.+++.+++||+....+ +.+.++.+.+.| +|.|..
T Consensus 254 ~la~~l~~~Gvd~i~v~~~------~~-~------~~~~~~ik~~~~iPvi~~Ggi-t~e~a~~~l~~G~aD~V~i 315 (361)
T 3gka_A 254 HVARELGRRRIAFLFARES------FG-G------DAIGQQLKAAFGGPFIVNENF-TLDSAQAALDAGQADAVAW 315 (361)
T ss_dssp HHHHHHHHTTCSEEEEECC------CS-T------TCCHHHHHHHHCSCEEEESSC-CHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHcCCCEEEECCC------CC-C------HHHHHHHHHHcCCCEEEeCCC-CHHHHHHHHHcCCccEEEE
Confidence 6799999999999854311 11 1 246788888899999998888 677887777777 999873
No 496
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=79.11 E-value=22 Score=32.93 Aligned_cols=111 Identities=15% Similarity=0.196 Sum_probs=66.2
Q ss_pred HHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhc--CcceEeecccc-ch----HHHHHHHHcCCCee
Q 037779 46 EQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSV--TIPVMAKARIG-HF----VEAQILEAIGVDYV 118 (310)
Q Consensus 46 ~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~--~lPv~~kd~i~-~~----~~~~~~~~aGad~v 118 (310)
+.++.+.+.|++.+ -++ -|.....+.+.++++|+.+ ++++.+...-+ +. ..++.+.++|.+.+
T Consensus 157 ~~a~~~~~~G~~~i-KiK---------vG~~~~~d~~~v~avR~a~g~d~~l~vDan~~~~~~~A~~~~~~l~~~~i~~i 226 (389)
T 3ozy_A 157 DELAGWVEQGFTAA-KLK---------VGRAPRKDAANLRAMRQRVGADVEILVDANQSLGRHDALAMLRILDEAGCYWF 226 (389)
T ss_dssp HHHHHHHHTTCSEE-EEE---------CCSCHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHCCCCEE-eec---------cCCCHHHHHHHHHHHHHHcCCCceEEEECCCCcCHHHHHHHHHHHHhcCCCEE
Confidence 45777888899987 331 1111111256678888876 57777643222 11 23456677899998
Q ss_pred eecCCCChhHHHHHHHhcCCCCcEEee--cCCHHHHHHHHHhC-CCEEEEe
Q 037779 119 DESEVLTPADEENHINKHNFRVPFVCG--CRNLGESLRRIREG-AAMIRTK 166 (310)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~l~v~~~--v~t~~ea~~a~~~G-ad~I~v~ 166 (310)
-.+-.....+..+.+++...++++..+ +.+..++++.++.| +|++.+.
T Consensus 227 EqP~~~~d~~~~~~l~~~~~~iPIa~dE~i~~~~~~~~~i~~~~~d~v~ik 277 (389)
T 3ozy_A 227 EEPLSIDDIEGHRILRAQGTPVRIATGENLYTRNAFNDYIRNDAIDVLQAD 277 (389)
T ss_dssp ESCSCTTCHHHHHHHHTTCCSSEEEECTTCCHHHHHHHHHHTTCCSEECCC
T ss_pred ECCCCcccHHHHHHHHhcCCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeC
Confidence 643211122334445512246788775 78888999888766 5888765
No 497
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=79.04 E-value=20 Score=27.56 Aligned_cols=61 Identities=20% Similarity=0.258 Sum_probs=42.8
Q ss_pred cHHHHHHHHhc---CCCCEEEEccCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHcCC
Q 037779 209 PYDLVMQTKQL---GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQAVTNYS 276 (310)
Q Consensus 209 ~~~l~~~i~~~---~~iPVv~ia~GGI~t~~di~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~~~~~~~ 276 (310)
..++++.+++. .++|++++ .+-.+.+.+.++++.|+++++ .++-++......+...+....
T Consensus 66 g~~~~~~lr~~~~~~~~pii~~--s~~~~~~~~~~~~~~g~~~~l-----~KP~~~~~l~~~i~~~l~~~~ 129 (154)
T 3gt7_A 66 GYALCRWLKGQPDLRTIPVILL--TILSDPRDVVRSLECGADDFI-----TKPCKDVVLASHVKRLLSGVK 129 (154)
T ss_dssp HHHHHHHHHHSTTTTTSCEEEE--ECCCSHHHHHHHHHHCCSEEE-----ESSCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhCCCcCCCCEEEE--ECCCChHHHHHHHHCCCCEEE-----eCCCCHHHHHHHHHHHHHHHH
Confidence 35677777664 46898755 444578999999999999875 455567766666666665543
No 498
>3o6c_A PNP synthase, pyridoxine 5'-phosphate synthase; structural genomics, IDP90671, center for structural genomic infectious diseases; HET: MSE; 1.87A {Campylobacter jejuni subsp} SCOP: c.1.24.0 PDB: 3o6d_A*
Probab=78.94 E-value=33 Score=30.13 Aligned_cols=191 Identities=15% Similarity=0.091 Sum_probs=104.8
Q ss_pred HHHHHHHHHcCCcEEEecccccchhhhcCCCCCCCChHHHHHHHhhcCcceEeeccccchHHHHHHHHcCCCeee-ecCC
Q 037779 45 PEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKQIKSSVTIPVMAKARIGHFVEAQILEAIGVDYVD-ESEV 123 (310)
Q Consensus 45 ~~~a~~~~~~Ga~~I~~l~~~~~d~r~~~G~~~~~~~~~i~~i~~~~~lPv~~kd~i~~~~~~~~~~~aGad~v~-~~~~ 123 (310)
.+.|..++.+| ++|..- + ..|.|.- ..++++.+++.+.+|+=.-.-. +.+..+.+.+.--+.+. .++.
T Consensus 28 v~aA~~ae~aG-dgITvH-l-ReDrRHI-------~d~Dv~~L~~~~~~~lNlE~a~-t~emi~ial~~kP~~vtLVPEk 96 (260)
T 3o6c_A 28 LEAAFIVARHG-DQITLH-V-REDRRHA-------QDFDLENIIKFCKSPVNLECAL-NDEILNLALKLKPHRVTLVPEK 96 (260)
T ss_dssp HHHHHHHHHHS-SEEEEE-C-CTTCSSS-------CHHHHHHHHHHCSSCEEEEECS-CHHHHHHHHHHCCSEEEECCCS
T ss_pred HHHHHHHHHhC-CeEEEe-e-CCCcccC-------CHHHHHHHHHHcCCCEEeecCC-CHHHHHHHHHcCCCEEEECCCC
Confidence 37788899999 998432 1 1244433 3788999999888887443222 23556777888777765 3211
Q ss_pred --------------CChhHHHHHHHhcCCCCcEEeecCCHHHHHHHHHhCCCEEEEecCCCCCchHHHHHHHHH-hhcce
Q 037779 124 --------------LTPADEENHINKHNFRVPFVCGCRNLGESLRRIREGAAMIRTKGEAGTGNIVEAVRHVRS-VMGDI 188 (310)
Q Consensus 124 --------------~~~~~~~~~~~~~~~~l~v~~~v~t~~ea~~a~~~Gad~I~v~g~~~~~~~~~~~~~~~~-~~~~~ 188 (310)
.....+++.++..+..+-++++. ++++++.+.+.|||+|=.+ ||.+..+..+.-+ +-.--
T Consensus 97 reE~TTegGldv~~~~L~~~i~~L~~~GIrVSLFIDp-d~~qi~aA~~~GAd~IELh----TG~YA~a~~~~~sn~~~~~ 171 (260)
T 3o6c_A 97 REELTTEGGLCLNHAKLKQSIEKLQNANIEVSLFINP-SLEDIEKSKILKAQFIELH----TGHYANLHNALFSNISHTA 171 (260)
T ss_dssp GGGBCTTSSBCTTCTTHHHHHHHHHHTTCEEEEEECS-CHHHHHHHHHTTCSEEEEC----CHHHHHHHHHHHSSGGGST
T ss_pred CCccCCCCChhhCHHHHHHHHHHHHHCCCEEEEEeCC-CHHHHHHHHHhCCCEEEEe----chHhhhhhhcccccccccc
Confidence 11234566666666666777774 6778889999999999876 2222221110000 00000
Q ss_pred ecccccCchhHHhhhccCCCcHHHHHH--H---HhcCCCCEEEEccCCCCCHHHHHHHHHc-CCCEEEEcccccc
Q 037779 189 RVLRNMDDDEVFTFAKNIAAPYDLVMQ--T---KQLGRLPVVHFAAGGVATPADAAMMMQL-GCDGVFVGSGVFK 257 (310)
Q Consensus 189 ~~l~~~~~d~~~~~~~~~~~~~~l~~~--i---~~~~~iPVv~ia~GGI~t~~di~~~~~~-GadgV~VGsai~~ 257 (310)
.-++.++.+.-. .. .....++.+. . .....+-| =|+-|+ +.+++..+.+. +..-+-+|-+|+.
T Consensus 172 ~~~~~l~~~~~~--~~-~~~~~el~~l~~aA~~A~~lGL~V--nAGHGL-~y~Nv~~ia~ip~i~ElnIGHaiIa 240 (260)
T 3o6c_A 172 FALKELDQDKKT--LQ-AQFEKELQNLELCAKKGLELGLKV--AAGHGL-NYKNVKPVVKIKEICELNIGQSIVA 240 (260)
T ss_dssp TCCGGGCSCHHH--HH-HHHHHHHHHHHHHHHHHHHTTCEE--EECTTC-CTTTTHHHHTCTTCCEEEECHHHHH
T ss_pred ccccccccccch--hh-HHHHHHHHHHHHHHHHHHHcCCEE--ecCCCC-CHHHHHHHHhCCCCeEEecCHHHHH
Confidence 001111100000 00 0001111111 1 11134556 578899 58999887664 8999999988775
No 499
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=78.81 E-value=8 Score=34.92 Aligned_cols=57 Identities=12% Similarity=0.090 Sum_probs=32.4
Q ss_pred HHHHHHhc-CCCCEEEEccCCCCCHHHH---HHHHHcCCCEEEEccccccCCCHHHHHHHHHH
Q 037779 212 LVMQTKQL-GRLPVVHFAAGGVATPADA---AMMMQLGCDGVFVGSGVFKSGDPVRRARAIVQ 270 (310)
Q Consensus 212 l~~~i~~~-~~iPVv~ia~GGI~t~~di---~~~~~~GadgV~VGsai~~~~dp~~~~~~~~~ 270 (310)
+++.+.+. .++||++ -.|+.++.+.+ +.+.++|||++++-...+. ++.....+-|..
T Consensus 66 v~~~~v~~~grvpVia-Gvg~~~t~~ai~la~~A~~~Gadavlv~~P~~~-~s~~~l~~~f~~ 126 (313)
T 3dz1_A 66 VATRFIKRAKSMQVIV-GVSAPGFAAMRRLARLSMDAGAAGVMIAPPPSL-RTDEQITTYFRQ 126 (313)
T ss_dssp HHHHHHHHCTTSEEEE-ECCCSSHHHHHHHHHHHHHHTCSEEEECCCTTC-CSHHHHHHHHHH
T ss_pred HHHHHHHHcCCCcEEE-ecCCCCHHHHHHHHHHHHHcCCCEEEECCCCCC-CCHHHHHHHHHH
Confidence 44444333 4789953 34444433333 3344679999999988765 455444444443
No 500
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=78.81 E-value=31 Score=33.35 Aligned_cols=142 Identities=16% Similarity=0.168 Sum_probs=79.2
Q ss_pred HHHHHHHcCCCeeeecCCCChhHHH---HHHHhcCCCCcEEeecCCHHHHH---HHHHhCCCEEEEecCCCCCchHHHHH
Q 037779 106 EAQILEAIGVDYVDESEVLTPADEE---NHINKHNFRVPFVCGCRNLGESL---RRIREGAAMIRTKGEAGTGNIVEAVR 179 (310)
Q Consensus 106 ~~~~~~~aGad~v~~~~~~~~~~~~---~~~~~~~~~l~v~~~v~t~~ea~---~a~~~Gad~I~v~g~~~~~~~~~~~~ 179 (310)
.++.+.+.|+|+|..+...++.++. +.+...+..+.+++-+.|.+-+. ..++. .|.+.+. + +.+
T Consensus 198 DI~~~l~~g~d~I~lpfV~saeDv~~~~~~l~~~~~~i~IiakIEt~eav~nldeI~~~-~DgImvg-r---gDL----- 267 (500)
T 1a3w_A 198 DLRFGVKNGVHMVFASFIRTANDVLTIREVLGEQGKDVKIIVKIENQQGVNNFDEILKV-TDGVMVA-R---GDL----- 267 (500)
T ss_dssp HHHHHHHHTCSEEEECSCCSHHHHHHHHHHHHHHHTTSEEEEEECSSHHHHSHHHHHHH-SSEEEEC-H---HHH-----
T ss_pred HHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHhcCCCcEEEEEECChHHHHhHHHHHHh-CCEEEEC-c---hHh-----
Confidence 4556666899999877666666544 34433334567777776655332 11222 5666663 2 010
Q ss_pred HHHHhhcceecccccCchhHHhhhccCCCcHHHHHHHHhcCCCCEEE-------EccCCCCCHH---HHHHHHHcCCCEE
Q 037779 180 HVRSVMGDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVH-------FAAGGVATPA---DAAMMMQLGCDGV 249 (310)
Q Consensus 180 ~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~l~~~i~~~~~iPVv~-------ia~GGI~t~~---di~~~~~~GadgV 249 (310)
..++ + .+.+. ..-..++....+ ..+|++. ......-+.. |+..+...|+|+|
T Consensus 268 -gvel-------g---~~~v~------~aqk~ii~aara-aGkpvi~ATQMLeSMi~~~~ptraEvsdva~av~~G~d~v 329 (500)
T 1a3w_A 268 -GIEI-------P---APEVL------AVQKKLIAKSNL-AGKPVICATQMLESMTYNPRPTRAEVSDVGNAILDGADCV 329 (500)
T ss_dssp -HHHT-------T---GGGHH------HHHHHHHHHHHH-HTCCEEECSSTTGGGGSCSSCCHHHHHHHHHHHHHTCSEE
T ss_pred -hhhc-------C---cHHHH------HHHHHHHHHHHh-cCCCEEEEeehhhhhccCCCchHHHHHHHHHHHHhCCCEE
Confidence 0000 0 00000 000112222222 3678852 0133433433 7788888999999
Q ss_pred EEccccccCCCHHHHHHHHHHHHHcC
Q 037779 250 FVGSGVFKSGDPVRRARAIVQAVTNY 275 (310)
Q Consensus 250 ~VGsai~~~~dp~~~~~~~~~~~~~~ 275 (310)
++++--.....|.+.++.+.+.....
T Consensus 330 mLs~eta~G~yPveaV~~m~~I~~~a 355 (500)
T 1a3w_A 330 MLSGETAKGNYPINAVTTMAETAVIA 355 (500)
T ss_dssp CBSTTTTTCSCHHHHHHHHHHHHHHH
T ss_pred EecchhhcchhHHHHHHHHHHHHHHh
Confidence 99999989999999888877765543
Done!