BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037780
(455 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/298 (40%), Positives = 176/298 (59%), Gaps = 14/298 (4%)
Query: 152 NLRCFSYKALEEATDNF--KEEAGRGSFGIVYKGVIETTRTSTTAVAVKKL-DRVFQDGE 208
L+ FS + L+ A+DNF K GRG FG VYKG + T VAVK+L + Q GE
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRL----ADGTLVAVKRLKEERXQGGE 79
Query: 209 KEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPS----WN 264
+F+ EV +I H+NL+RL GFC RLLVY ++ NG++AS L + W
Sbjct: 80 LQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWP 139
Query: 265 LRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKT 324
R IA ARGL YLH+ C +IIH D+K NILLD+ + A + DFGLAKL+ +
Sbjct: 140 KRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY-KDXH 198
Query: 325 IKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIE--MGEEYAILTD 382
+ A+RGT G++APE+ + K DV+ +GV+LLE+I+ +++FD+ ++ +L D
Sbjct: 199 VXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD 258
Query: 383 WAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEG 440
W + KL+ LV+ D++ + VE+L+ V++ C Q P RP M +V +MLEG
Sbjct: 259 WVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 316
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 119/298 (39%), Positives = 174/298 (58%), Gaps = 14/298 (4%)
Query: 152 NLRCFSYKALEEATDNF--KEEAGRGSFGIVYKGVIETTRTSTTAVAVKKL-DRVFQDGE 208
L+ FS + L+ A+DNF K GRG FG VYKG + VAVK+L + Q GE
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRL----ADGXLVAVKRLKEERTQGGE 71
Query: 209 KEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPS----WN 264
+F+ EV +I H+NL+RL GFC RLLVY ++ NG++AS L + W
Sbjct: 72 LQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWP 131
Query: 265 LRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKT 324
R IA ARGL YLH+ C +IIH D+K NILLD+ + A + DFGLAKL+ +
Sbjct: 132 KRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY-KDXH 190
Query: 325 IKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIE--MGEEYAILTD 382
+ A+RG G++APE+ + K DV+ +GV+LLE+I+ +++FD+ ++ +L D
Sbjct: 191 VXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD 250
Query: 383 WAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEG 440
W + KL+ LV+ D++ + VE+L+ V++ C Q P RP M +V +MLEG
Sbjct: 251 WVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 26/305 (8%)
Query: 150 ETNLRCFSYKALEEATDNFKE--------EAGRGSFGIVYKGVIETTRTSTTAVAVKKL- 200
+T FS+ L+ T+NF E + G G FG+VYKG + + T VAVKKL
Sbjct: 9 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-----NNTTVAVKKLA 63
Query: 201 ---DRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLA---SF 254
D ++ +++F E+ V+ + H+NLV LLGF +G + LVY ++ NG+L S
Sbjct: 64 AMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC 123
Query: 255 LFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLA 314
L G SW++R IA A G+ +LHE+ IH DIK NILLD+ + A+ISDFGLA
Sbjct: 124 LDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLA 180
Query: 315 KLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMG 374
+ + + I GT Y+APE R IT K D+YSFGV+LLEII+ + D E
Sbjct: 181 RASEKFAQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVD-EHR 238
Query: 375 EEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKV 434
E +L ++D ++ M D VE + V+ C+ E + RP ++KV
Sbjct: 239 EPQLLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKV 297
Query: 435 SQMLE 439
Q+L+
Sbjct: 298 QQLLQ 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/305 (37%), Positives = 163/305 (53%), Gaps = 26/305 (8%)
Query: 150 ETNLRCFSYKALEEATDNFKE--------EAGRGSFGIVYKGVIETTRTSTTAVAVKKL- 200
+T FS+ L+ T+NF E + G G FG+VYKG + + T VAVKKL
Sbjct: 9 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-----NNTTVAVKKLA 63
Query: 201 ---DRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLA---SF 254
D ++ +++F E+ V+ + H+NLV LLGF +G + LVY ++ NG+L S
Sbjct: 64 AMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC 123
Query: 255 LFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLA 314
L G SW++R IA A G+ +LHE+ IH DIK NILLD+ + A+ISDFGLA
Sbjct: 124 LDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLA 180
Query: 315 KLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMG 374
+ + I GT Y+APE R IT K D+YSFGV+LLEII+ + D E
Sbjct: 181 RASEKFAQTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVD-EHR 238
Query: 375 EEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKV 434
E +L ++D ++ M D VE + V+ C+ E + RP ++KV
Sbjct: 239 EPQLLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKV 297
Query: 435 SQMLE 439
Q+L+
Sbjct: 298 QQLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/305 (37%), Positives = 163/305 (53%), Gaps = 26/305 (8%)
Query: 150 ETNLRCFSYKALEEATDNFKE--------EAGRGSFGIVYKGVIETTRTSTTAVAVKKL- 200
+T FS+ L+ T+NF E + G G FG+VYKG + + T VAVKKL
Sbjct: 3 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-----NNTTVAVKKLA 57
Query: 201 ---DRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLA---SF 254
D ++ +++F E+ V+ + H+NLV LLGF +G + LVY ++ NG+L S
Sbjct: 58 AMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC 117
Query: 255 LFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLA 314
L G SW++R IA A G+ +LHE+ IH DIK NILLD+ + A+ISDFGLA
Sbjct: 118 LDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLA 174
Query: 315 KLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMG 374
+ + I GT Y+APE R IT K D+YSFGV+LLEII+ + D E
Sbjct: 175 RASEKFAQXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVD-EHR 232
Query: 375 EEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKV 434
E +L ++D ++ M D VE + V+ C+ E + RP ++KV
Sbjct: 233 EPQLLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKV 291
Query: 435 SQMLE 439
Q+L+
Sbjct: 292 QQLLQ 296
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 165/309 (53%), Gaps = 18/309 (5%)
Query: 142 NSPGDGTVETNLRCF-SYKA----LEEATDNFKEE--AGRGSFGIVYKGVIETTRTSTTA 194
NS D + L F SY+ LEEAT+NF + G G FG VYKGV+
Sbjct: 10 NSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR----DGAK 65
Query: 195 VAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASF 254
VA+K+ G +EF+ E+ + H +LV L+GFCDE +L+Y+++ NG L
Sbjct: 66 VALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRH 125
Query: 255 LFGNLKP----SWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISD 310
L+G+ P SW R I ARGL YLH + IIH D+K NILLD+++ +I+D
Sbjct: 126 LYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITD 182
Query: 311 FGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFD 370
FG++K T + ++GT GY+ PE++ K +T K DVYSFGV+L E++ R +
Sbjct: 183 FGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIV 242
Query: 371 IEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPT 430
+ E L +WA + + NG+L+ +V+ ++ + + K ++ C+ RP+
Sbjct: 243 QSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPS 302
Query: 431 MRKVSQMLE 439
M V LE
Sbjct: 303 MGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 165/309 (53%), Gaps = 18/309 (5%)
Query: 142 NSPGDGTVETNLRCF-SYKA----LEEATDNFKEE--AGRGSFGIVYKGVIETTRTSTTA 194
NS D + L F SY+ LEEAT+NF + G G FG VYKGV+
Sbjct: 10 NSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR----DGAK 65
Query: 195 VAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASF 254
VA+K+ G +EF+ E+ + H +LV L+GFCDE +L+Y+++ NG L
Sbjct: 66 VALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRH 125
Query: 255 LFGNLKP----SWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISD 310
L+G+ P SW R I ARGL YLH + IIH D+K NILLD+++ +I+D
Sbjct: 126 LYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITD 182
Query: 311 FGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFD 370
FG++K T + ++GT GY+ PE++ K +T K DVYSFGV+L E++ R +
Sbjct: 183 FGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIV 242
Query: 371 IEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPT 430
+ E L +WA + + NG+L+ +V+ ++ + + K ++ C+ RP+
Sbjct: 243 QSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPS 302
Query: 431 MRKVSQMLE 439
M V LE
Sbjct: 303 MGDVLWKLE 311
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 112/304 (36%), Positives = 156/304 (51%), Gaps = 26/304 (8%)
Query: 151 TNLRCFSYKALEEATDNFKE--------EAGRGSFGIVYKGVIETTRTSTTAVAVKKL-- 200
T FS+ L+ T+NF E + G G FG+VYKG + + T VAVKKL
Sbjct: 1 TRFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-----NNTTVAVKKLAA 55
Query: 201 --DRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLA---SFL 255
D ++ +++F E+ V + H+NLV LLGF +G + LVY + NG+L S L
Sbjct: 56 MVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCL 115
Query: 256 FGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAK 315
G SW+ R IA A G+ +LHE+ IH DIK NILLD+ + A+ISDFGLA+
Sbjct: 116 DGTPPLSWHXRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLAR 172
Query: 316 LLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGE 375
+ I GT Y APE R IT K D+YSFGV+LLEII+ + D E E
Sbjct: 173 ASEKFAQXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVD-EHRE 230
Query: 376 EYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVS 435
+L ++D ++ D VE V+ C+ E + RP ++KV
Sbjct: 231 PQLLLDIKEEIEDEEKTIEDYIDKKXNDA-DSTSVEAXYSVASQCLHEKKNKRPDIKKVQ 289
Query: 436 QMLE 439
Q+L+
Sbjct: 290 QLLQ 293
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 135/293 (46%), Gaps = 40/293 (13%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 226
N KE+ G GSFG V++ S AV + + EF EV ++ + H N+
Sbjct: 40 NIKEKIGAGSFGTVHRA---EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHED 283
V +G + N +V E+L+ G+L L + R ++A+ +A+G+ YLH +
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-N 155
Query: 284 CSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRK 343
+ I+H D+K N+L+D Y ++ DFGL++L + A GT ++APE R
Sbjct: 156 RNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAA--GTPEWMAPEVLRD 213
Query: 344 STITAKVDVYSFGVLLLEIISCRKSF-DIEMGEEYAILTDWAFDCYR-------NGKLDD 395
K DVYSFGV+L E+ + ++ + ++ + A + F C R N ++
Sbjct: 214 EPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAV---GFKCKRLEIPRNLNPQVAA 270
Query: 396 LVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEVDVPP 448
++EG C +P RP+ + +L +++ VPP
Sbjct: 271 IIEG--------------------CWTNEPWKRPSFATIMDLLRPLIKSAVPP 303
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 144/291 (49%), Gaps = 37/291 (12%)
Query: 152 NLRCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEF 211
+L YK +E +E GRG+FG+V K + VA+K+++ + K F
Sbjct: 2 SLHMIDYKEIE-----VEEVVGRGAFGVVCKA-----KWRAKDVAIKQIES--ESERKAF 49
Query: 212 KNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIA 270
E+ + + +H N+V+L G C LV E+ G+L + L G P + ++
Sbjct: 50 IVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMS 107
Query: 271 F--QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNA-RISDFGLAKLLTLNQSKTIKT 327
+ Q ++G+ YLH +IH D+KP N+LL +I DFG T +T T
Sbjct: 108 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG-----TACDIQTHMT 162
Query: 328 AIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 387
+G+ ++APE + S + K DV+S+G++L E+I+ RK FD G + I+ WA
Sbjct: 163 NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM--WAV-- 218
Query: 388 YRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQML 438
NG L++ N K +E L+ C +DPS RP+M ++ +++
Sbjct: 219 -HNGTRPPLIK------NLPKPIESLMTR---CWSKDPSQRPSMEEIVKIM 259
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 144/291 (49%), Gaps = 37/291 (12%)
Query: 152 NLRCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEF 211
+L YK +E +E GRG+FG+V K + VA+K+++ + K F
Sbjct: 1 SLHMIDYKEIE-----VEEVVGRGAFGVVCKA-----KWRAKDVAIKQIES--ESERKAF 48
Query: 212 KNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIA 270
E+ + + +H N+V+L G C LV E+ G+L + L G P + ++
Sbjct: 49 IVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMS 106
Query: 271 F--QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNA-RISDFGLAKLLTLNQSKTIKT 327
+ Q ++G+ YLH +IH D+KP N+LL +I DFG T +T T
Sbjct: 107 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG-----TACDIQTHMT 161
Query: 328 AIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 387
+G+ ++APE + S + K DV+S+G++L E+I+ RK FD G + I+ WA
Sbjct: 162 NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM--WAV-- 217
Query: 388 YRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQML 438
NG L++ N K +E L+ C +DPS RP+M ++ +++
Sbjct: 218 -HNGTRPPLIK------NLPKPIESLMTR---CWSKDPSQRPSMEEIVKIM 258
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 137/295 (46%), Gaps = 44/295 (14%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 226
N KE+ G GSFG V++ S AV + + EF EV ++ + H N+
Sbjct: 40 NIKEKIGAGSFGTVHRA---EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHED 283
V +G + N +V E+L+ G+L L + R ++A+ +A+G+ YLH +
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-N 155
Query: 284 CSSQIIHCDIKPQNILLDDHYNARISDFGLAKL--LTLNQSKTIKTAIRGTKGYVAPEWY 341
+ I+H ++K N+L+D Y ++ DFGL++L T SK+ GT ++APE
Sbjct: 156 RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAA----GTPEWMAPEVL 211
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRKSF-DIEMGEEYAILTDWAFDCYR-------NGKL 393
R K DVYSFGV+L E+ + ++ + ++ + A + F C R N ++
Sbjct: 212 RDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAV---GFKCKRLEIPRNLNPQV 268
Query: 394 DDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEVDVPP 448
++EG C +P RP+ + +L +++ VPP
Sbjct: 269 AAIIEG--------------------CWTNEPWKRPSFATIMDLLRPLIKSAVPP 303
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 107/203 (52%), Gaps = 8/203 (3%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKN 225
+F E GRG FG VY G + AVK L+R+ GE +F E +++ H N
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 226 LVRLLGFCDEGQ-NRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHED 283
++ LLG C + + L+V ++ +G L +F+ P+ Q+A+G+ YL
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 148
Query: 284 CSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTI--KTAIRGTKGYVAPEWY 341
S + +H D+ +N +LD+ + +++DFGLA+ + + ++ KT + ++A E
Sbjct: 149 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESL 208
Query: 342 RKSTITAKVDVYSFGVLLLEIIS 364
+ T K DV+SFGVLL E+++
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 132/284 (46%), Gaps = 26/284 (9%)
Query: 163 EATD-NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT 221
E TD K + G G FG VY+GV + + VAVK L + E EF E V+ +
Sbjct: 9 ERTDITMKHKLGGGQFGEVYEGVW---KKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEI 64
Query: 222 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGLLY 279
H NLV+LLG C ++ EF+ G L +L + S + +A QI+ + Y
Sbjct: 65 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 124
Query: 280 LHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPE 339
L + IH D+ +N L+ +++ +++DFGL++L+T + T + + APE
Sbjct: 125 LEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPE 180
Query: 340 WYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEG 399
+ + K DV++FGVLL EI + S + ++ +L+E
Sbjct: 181 SLAYNKFSIKSDVWAFGVLLWEIATYGMS---------------PYPGIDPSQVYELLEK 225
Query: 400 DMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVE 443
D C EK+ + C Q +PS RP+ ++ Q E + +
Sbjct: 226 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 269
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 107/203 (52%), Gaps = 8/203 (3%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKN 225
+F E GRG FG VY G + AVK L+R+ GE +F E +++ H N
Sbjct: 51 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 110
Query: 226 LVRLLGFCDEGQ-NRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHED 283
++ LLG C + + L+V ++ +G L +F+ P+ Q+A+G+ YL
Sbjct: 111 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 167
Query: 284 CSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTI--KTAIRGTKGYVAPEWY 341
S + +H D+ +N +LD+ + +++DFGLA+ + + ++ KT + ++A E
Sbjct: 168 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 227
Query: 342 RKSTITAKVDVYSFGVLLLEIIS 364
+ T K DV+SFGVLL E+++
Sbjct: 228 QTQKFTTKSDVWSFGVLLWELMT 250
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 107/203 (52%), Gaps = 8/203 (3%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKN 225
+F E GRG FG VY G + AVK L+R+ GE +F E +++ H N
Sbjct: 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 89
Query: 226 LVRLLGFCDEGQ-NRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHED 283
++ LLG C + + L+V ++ +G L +F+ P+ Q+A+G+ YL
Sbjct: 90 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 146
Query: 284 CSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTI--KTAIRGTKGYVAPEWY 341
S + +H D+ +N +LD+ + +++DFGLA+ + + ++ KT + ++A E
Sbjct: 147 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 206
Query: 342 RKSTITAKVDVYSFGVLLLEIIS 364
+ T K DV+SFGVLL E+++
Sbjct: 207 QTQKFTTKSDVWSFGVLLWELMT 229
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 107/203 (52%), Gaps = 8/203 (3%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKN 225
+F E GRG FG VY G + AVK L+R+ GE +F E +++ H N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 226 LVRLLGFCDEGQ-NRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHED 283
++ LLG C + + L+V ++ +G L +F+ P+ Q+A+G+ YL
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 147
Query: 284 CSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTI--KTAIRGTKGYVAPEWY 341
S + +H D+ +N +LD+ + +++DFGLA+ + + ++ KT + ++A E
Sbjct: 148 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 207
Query: 342 RKSTITAKVDVYSFGVLLLEIIS 364
+ T K DV+SFGVLL E+++
Sbjct: 208 QTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 107/203 (52%), Gaps = 8/203 (3%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKN 225
+F E GRG FG VY G + AVK L+R+ GE +F E +++ H N
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 87
Query: 226 LVRLLGFCDEGQ-NRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHED 283
++ LLG C + + L+V ++ +G L +F+ P+ Q+A+G+ YL
Sbjct: 88 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 144
Query: 284 CSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTI--KTAIRGTKGYVAPEWY 341
S + +H D+ +N +LD+ + +++DFGLA+ + + ++ KT + ++A E
Sbjct: 145 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 204
Query: 342 RKSTITAKVDVYSFGVLLLEIIS 364
+ T K DV+SFGVLL E+++
Sbjct: 205 QTQKFTTKSDVWSFGVLLWELMT 227
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 107/203 (52%), Gaps = 8/203 (3%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKN 225
+F E GRG FG VY G + AVK L+R+ GE +F E +++ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 226 LVRLLGFCDEGQ-NRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHED 283
++ LLG C + + L+V ++ +G L +F+ P+ Q+A+G+ YL
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 149
Query: 284 CSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTI--KTAIRGTKGYVAPEWY 341
S + +H D+ +N +LD+ + +++DFGLA+ + + ++ KT + ++A E
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
Query: 342 RKSTITAKVDVYSFGVLLLEIIS 364
+ T K DV+SFGVLL E+++
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 107/203 (52%), Gaps = 8/203 (3%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKN 225
+F E GRG FG VY G + AVK L+R+ GE +F E +++ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 226 LVRLLGFCDEGQ-NRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHED 283
++ LLG C + + L+V ++ +G L +F+ P+ Q+A+G+ YL
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 149
Query: 284 CSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTI--KTAIRGTKGYVAPEWY 341
S + +H D+ +N +LD+ + +++DFGLA+ + + ++ KT + ++A E
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
Query: 342 RKSTITAKVDVYSFGVLLLEIIS 364
+ T K DV+SFGVLL E+++
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMT 232
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 107/203 (52%), Gaps = 8/203 (3%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKN 225
+F E GRG FG VY G + AVK L+R+ GE +F E +++ H N
Sbjct: 52 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 111
Query: 226 LVRLLGFCDEGQ-NRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHED 283
++ LLG C + + L+V ++ +G L +F+ P+ Q+A+G+ YL
Sbjct: 112 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 168
Query: 284 CSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTI--KTAIRGTKGYVAPEWY 341
S + +H D+ +N +LD+ + +++DFGLA+ + + ++ KT + ++A E
Sbjct: 169 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 228
Query: 342 RKSTITAKVDVYSFGVLLLEIIS 364
+ T K DV+SFGVLL E+++
Sbjct: 229 QTQKFTTKSDVWSFGVLLWELMT 251
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 107/203 (52%), Gaps = 8/203 (3%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKN 225
+F E GRG FG VY G + AVK L+R+ GE +F E +++ H N
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 226 LVRLLGFCDEGQ-NRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHED 283
++ LLG C + + L+V ++ +G L +F+ P+ Q+A+G+ YL
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 148
Query: 284 CSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTI--KTAIRGTKGYVAPEWY 341
S + +H D+ +N +LD+ + +++DFGLA+ + + ++ KT + ++A E
Sbjct: 149 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 208
Query: 342 RKSTITAKVDVYSFGVLLLEIIS 364
+ T K DV+SFGVLL E+++
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 107/203 (52%), Gaps = 8/203 (3%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKN 225
+F E GRG FG VY G + AVK L+R+ GE +F E +++ H N
Sbjct: 25 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 84
Query: 226 LVRLLGFCDEGQ-NRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHED 283
++ LLG C + + L+V ++ +G L +F+ P+ Q+A+G+ YL
Sbjct: 85 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 141
Query: 284 CSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTI--KTAIRGTKGYVAPEWY 341
S + +H D+ +N +LD+ + +++DFGLA+ + + ++ KT + ++A E
Sbjct: 142 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 201
Query: 342 RKSTITAKVDVYSFGVLLLEIIS 364
+ T K DV+SFGVLL E+++
Sbjct: 202 QTQKFTTKSDVWSFGVLLWELMT 224
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 117/235 (49%), Gaps = 18/235 (7%)
Query: 145 GDGTVETNLRCFSYKALEEATD----------NFKEEAGRGSFGIVYKGVIETTRTSTTA 194
G GTV +L + + ++ +F E GRG FG VY G +
Sbjct: 1 GPGTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIH 60
Query: 195 VAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKNLVRLLGFCDEGQ-NRLLVYEFLNNGTLA 252
AVK L+R+ GE +F E +++ H N++ LLG C + + L+V ++ +G L
Sbjct: 61 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 120
Query: 253 SFLFGNLK-PSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDF 311
+F+ P+ Q+A+G+ +L S + +H D+ +N +LD+ + +++DF
Sbjct: 121 NFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADF 177
Query: 312 GLAKLLTLNQSKTI--KTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIIS 364
GLA+ + + ++ KT + ++A E + T K DV+SFGVLL E+++
Sbjct: 178 GLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 132/284 (46%), Gaps = 26/284 (9%)
Query: 163 EATD-NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT 221
E TD K + G G +G VY+GV + + VAVK L + E EF E V+ +
Sbjct: 9 ERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEI 64
Query: 222 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGLLY 279
H NLV+LLG C ++ EF+ G L +L + S + +A QI+ + Y
Sbjct: 65 KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 124
Query: 280 LHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPE 339
L + IH D+ +N L+ +++ +++DFGL++L+T + T + + APE
Sbjct: 125 LEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPE 180
Query: 340 WYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEG 399
+ + K DV++FGVLL EI + S + ++ +L+E
Sbjct: 181 SLAYNKFSIKSDVWAFGVLLWEIATYGMS---------------PYPGIDPSQVYELLEK 225
Query: 400 DMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVE 443
D C EK+ + C Q +PS RP+ ++ Q E + +
Sbjct: 226 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 269
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 127/275 (46%), Gaps = 33/275 (12%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 229
E G G FG V+ G T VAVK L + + F E ++ Q H+ LVRL
Sbjct: 21 ERLGAGQFGEVWMGYY----NGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL 75
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+ + ++ E++ NG+L FL +K + N ++A QIA G+ ++ E
Sbjct: 76 YAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RN 131
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVAPEWYRKS 344
IH D++ NIL+ D + +I+DFGLA+L+ N+ TA G K + APE
Sbjct: 132 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX----TAREGAKFPIKWTAPEAINYG 187
Query: 345 TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAM 404
T T K DV+SFG+LL EI++ + + N ++ +E +
Sbjct: 188 TFTIKSDVWSFGILLTEIVTHGRI---------------PYPGMTNPEVIQNLERGYRMV 232
Query: 405 NDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
C E+L + C +E P RPT + +LE
Sbjct: 233 RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 267
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 127/275 (46%), Gaps = 33/275 (12%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 229
E G G FG V+ G T VAVK L + + F E ++ Q H+ LVRL
Sbjct: 19 ERLGAGQFGEVWMGYY----NGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL 73
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+ + ++ E++ NG+L FL +K + N ++A QIA G+ ++ E
Sbjct: 74 YAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RN 129
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVAPEWYRKS 344
IH D++ NIL+ D + +I+DFGLA+L+ N+ TA G K + APE
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX----TAREGAKFPIKWTAPEAINYG 185
Query: 345 TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAM 404
T T K DV+SFG+LL EI++ + + N ++ +E +
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRI---------------PYPGMTNPEVIQNLERGYRMV 230
Query: 405 NDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
C E+L + C +E P RPT + +LE
Sbjct: 231 RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 127/275 (46%), Gaps = 33/275 (12%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 229
E G G FG V+ G T VAVK L + + F E ++ Q H+ LVRL
Sbjct: 27 ERLGAGQFGEVWMGYY----NGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL 81
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+ + ++ E++ NG+L FL +K + N ++A QIA G+ ++ E
Sbjct: 82 YAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RN 137
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVAPEWYRKS 344
IH D++ NIL+ D + +I+DFGLA+L+ N+ TA G K + APE
Sbjct: 138 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX----TAREGAKFPIKWTAPEAINYG 193
Query: 345 TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAM 404
T T K DV+SFG+LL EI++ + + N ++ +E +
Sbjct: 194 TFTIKSDVWSFGILLTEIVTHGRI---------------PYPGMTNPEVIQNLERGYRMV 238
Query: 405 NDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
C E+L + C +E P RPT + +LE
Sbjct: 239 RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 273
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 127/275 (46%), Gaps = 33/275 (12%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 229
E G G FG V+ G T VAVK L + + F E ++ Q H+ LVRL
Sbjct: 28 ERLGAGQFGEVWMGYY----NGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL 82
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+ + ++ E++ NG+L FL +K + N ++A QIA G+ ++ E
Sbjct: 83 YAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RN 138
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVAPEWYRKS 344
IH D++ NIL+ D + +I+DFGLA+L+ N+ TA G K + APE
Sbjct: 139 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX----TAREGAKFPIKWTAPEAINYG 194
Query: 345 TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAM 404
T T K DV+SFG+LL EI++ + + N ++ +E +
Sbjct: 195 TFTIKSDVWSFGILLTEIVTHGRI---------------PYPGMTNPEVIQNLERGYRMV 239
Query: 405 NDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
C E+L + C +E P RPT + +LE
Sbjct: 240 RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 274
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 127/275 (46%), Gaps = 33/275 (12%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 229
E G G FG V+ G T VAVK L + + F E ++ Q H+ LVRL
Sbjct: 25 ERLGAGQFGEVWMGYY----NGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL 79
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+ + ++ E++ NG+L FL +K + N ++A QIA G+ ++ E
Sbjct: 80 YAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RN 135
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVAPEWYRKS 344
IH D++ NIL+ D + +I+DFGLA+L+ N+ TA G K + APE
Sbjct: 136 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX----TAREGAKFPIKWTAPEAINYG 191
Query: 345 TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAM 404
T T K DV+SFG+LL EI++ + + N ++ +E +
Sbjct: 192 TFTIKSDVWSFGILLTEIVTHGRI---------------PYPGMTNPEVIQNLERGYRMV 236
Query: 405 NDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
C E+L + C +E P RPT + +LE
Sbjct: 237 RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 127/275 (46%), Gaps = 33/275 (12%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 229
E G G FG V+ G T VAVK L + + F E ++ Q H+ LVRL
Sbjct: 19 ERLGAGQFGEVWMGYY----NGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL 73
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+ + ++ E++ NG+L FL +K + N ++A QIA G+ ++ E
Sbjct: 74 YAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RN 129
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVAPEWYRKS 344
IH D++ NIL+ D + +I+DFGLA+L+ N+ TA G K + APE
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX----TAREGAKFPIKWTAPEAINYG 185
Query: 345 TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAM 404
T T K DV+SFG+LL EI++ + + N ++ +E +
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRI---------------PYPGMTNPEVIQNLERGYRMV 230
Query: 405 NDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
C E+L + C +E P RPT + +LE
Sbjct: 231 RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 133/284 (46%), Gaps = 26/284 (9%)
Query: 163 EATD-NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT 221
E TD K + G G +G VY+GV + + VAVK L + E EF E V+ +
Sbjct: 12 ERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEI 67
Query: 222 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWN--LRTNIAFQIARGLLY 279
H NLV+LLG C ++ EF+ G L +L + N + +A QI+ + Y
Sbjct: 68 KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 127
Query: 280 LHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPE 339
L + IH D+ +N L+ +++ +++DFGL++L+T + T + + APE
Sbjct: 128 LEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPE 183
Query: 340 WYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEG 399
+ + K DV++FGVLL EI + Y + D ++ +L+E
Sbjct: 184 SLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGIDL---SQVYELLEK 228
Query: 400 DMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVE 443
D C EK+ + C Q +PS RP+ ++ Q E + +
Sbjct: 229 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 272
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 127/275 (46%), Gaps = 33/275 (12%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 229
E G G FG V+ G T VAVK L + + F E ++ Q H+ LVRL
Sbjct: 20 ERLGAGQFGEVWMGYY----NGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL 74
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+ + ++ E++ NG+L FL +K + N ++A QIA G+ ++ E
Sbjct: 75 YAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RN 130
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVAPEWYRKS 344
IH D++ NIL+ D + +I+DFGLA+L+ N+ TA G K + APE
Sbjct: 131 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX----TAREGAKFPIKWTAPEAINYG 186
Query: 345 TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAM 404
T T K DV+SFG+LL EI++ + + N ++ +E +
Sbjct: 187 TFTIKSDVWSFGILLTEIVTHGRI---------------PYPGMTNPEVIQNLERGYRMV 231
Query: 405 NDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
C E+L + C +E P RPT + +LE
Sbjct: 232 RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 266
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 99/211 (46%), Gaps = 14/211 (6%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 226
+E G G FG VY+ + A + + Q E + E + H N+
Sbjct: 10 TLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIEN-VRQEAKLFAMLKHPNI 68
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSS 286
+ L G C + N LV EF G L L G P ++ N A QIARG+ YLH++
Sbjct: 69 IALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPP-DILVNWAVQIARGMNYLHDEAIV 127
Query: 287 QIIHCDIKPQNILL------DDHYNA--RISDFGLAKLLTLNQSKTIKTAIRGTKGYVAP 338
IIH D+K NIL+ D N +I+DFGLA+ +T K + G ++AP
Sbjct: 128 PIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR----EWHRTTKMSAAGAYAWMAP 183
Query: 339 EWYRKSTITAKVDVYSFGVLLLEIISCRKSF 369
E R S + DV+S+GVLL E+++ F
Sbjct: 184 EVIRASMFSKGSDVWSYGVLLWELLTGEVPF 214
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 133/284 (46%), Gaps = 26/284 (9%)
Query: 163 EATD-NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT 221
E TD K + G G +G VY+GV + + VAVK L + E EF E V+ +
Sbjct: 16 ERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEI 71
Query: 222 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWN--LRTNIAFQIARGLLY 279
H NLV+LLG C ++ EF+ G L +L + N + +A QI+ + Y
Sbjct: 72 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 131
Query: 280 LHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPE 339
L + IH D+ +N L+ +++ +++DFGL++L+T + T + + APE
Sbjct: 132 LEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPE 187
Query: 340 WYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEG 399
+ + K DV++FGVLL EI + Y + D ++ +L+E
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGIDL---SQVYELLEK 232
Query: 400 DMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVE 443
D C EK+ + C Q +PS RP+ ++ Q E + +
Sbjct: 233 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 276
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 127/275 (46%), Gaps = 33/275 (12%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 229
E G G FG V+ G T VAVK L + + F E ++ Q H+ LVRL
Sbjct: 29 ERLGAGQFGEVWMGYY----NGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL 83
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+ + ++ E++ NG+L FL +K + N ++A QIA G+ ++ E
Sbjct: 84 YAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RN 139
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVAPEWYRKS 344
IH D++ NIL+ D + +I+DFGLA+L+ N+ TA G K + APE
Sbjct: 140 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY----TAREGAKFPIKWTAPEAINYG 195
Query: 345 TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAM 404
T T K DV+SFG+LL EI++ + + N ++ +E +
Sbjct: 196 TFTIKSDVWSFGILLTEIVTHGRI---------------PYPGMTNPEVIQNLERGYRMV 240
Query: 405 NDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
C E+L + C +E P RPT + +LE
Sbjct: 241 RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 275
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 133/284 (46%), Gaps = 26/284 (9%)
Query: 163 EATD-NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT 221
E TD K + G G +G VY+GV + + VAVK L + E EF E V+ +
Sbjct: 16 ERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEI 71
Query: 222 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWN--LRTNIAFQIARGLLY 279
H NLV+LLG C ++ EF+ G L +L + N + +A QI+ + Y
Sbjct: 72 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 131
Query: 280 LHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPE 339
L + IH D+ +N L+ +++ +++DFGL++L+T + T + + APE
Sbjct: 132 LEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 187
Query: 340 WYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEG 399
+ + K DV++FGVLL EI + Y + D ++ +L+E
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGIDL---SQVYELLEK 232
Query: 400 DMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVE 443
D C EK+ + C Q +PS RP+ ++ Q E + +
Sbjct: 233 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 276
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 127/275 (46%), Gaps = 33/275 (12%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 229
E G G FG V+ G T VAVK L + + F E ++ Q H+ LVRL
Sbjct: 19 ERLGAGQFGEVWMGYY----NGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL 73
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+ + ++ E++ NG+L FL +K + N ++A QIA G+ ++ E
Sbjct: 74 YAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RN 129
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVAPEWYRKS 344
IH D++ NIL+ D + +I+DFGLA+L+ N+ TA G K + APE
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY----TAREGAKFPIKWTAPEAINYG 185
Query: 345 TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAM 404
T T K DV+SFG+LL EI++ + + N ++ +E +
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRI---------------PYPGMTNPEVIQNLERGYRMV 230
Query: 405 NDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
C E+L + C +E P RPT + +LE
Sbjct: 231 RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 133/284 (46%), Gaps = 26/284 (9%)
Query: 163 EATD-NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT 221
E TD K + G G +G VY+GV + + VAVK L + E EF E V+ +
Sbjct: 15 ERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEI 70
Query: 222 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWN--LRTNIAFQIARGLLY 279
H NLV+LLG C ++ EF+ G L +L + N + +A QI+ + Y
Sbjct: 71 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 130
Query: 280 LHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPE 339
L + IH D+ +N L+ +++ +++DFGL++L+T + T + + APE
Sbjct: 131 LEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 186
Query: 340 WYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEG 399
+ + K DV++FGVLL EI + Y + D ++ +L+E
Sbjct: 187 SLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGIDL---SQVYELLEK 231
Query: 400 DMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVE 443
D C EK+ + C Q +PS RP+ ++ Q E + +
Sbjct: 232 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 275
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 127/275 (46%), Gaps = 33/275 (12%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 229
E G G FG V+ G T VAVK L + + F E ++ Q H+ LVRL
Sbjct: 24 ERLGAGQFGEVWMGYY----NGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL 78
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+ + ++ E++ NG+L FL +K + N ++A QIA G+ ++ E
Sbjct: 79 YAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RN 134
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVAPEWYRKS 344
IH D++ NIL+ D + +I+DFGLA+L+ N+ TA G K + APE
Sbjct: 135 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY----TAREGAKFPIKWTAPEAINYG 190
Query: 345 TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAM 404
T T K DV+SFG+LL EI++ + + N ++ +E +
Sbjct: 191 TFTIKSDVWSFGILLTEIVTHGRI---------------PYPGMTNPEVIQNLERGYRMV 235
Query: 405 NDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
C E+L + C +E P RPT + +LE
Sbjct: 236 RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 270
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 133/284 (46%), Gaps = 26/284 (9%)
Query: 163 EATD-NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT 221
E TD K + G G +G VY+GV + + VAVK L + E EF E V+ +
Sbjct: 16 ERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEI 71
Query: 222 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWN--LRTNIAFQIARGLLY 279
H NLV+LLG C ++ EF+ G L +L + N + +A QI+ + Y
Sbjct: 72 KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 131
Query: 280 LHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPE 339
L + IH D+ +N L+ +++ +++DFGL++L+T + T + + APE
Sbjct: 132 LEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 187
Query: 340 WYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEG 399
+ + K DV++FGVLL EI + Y + D ++ +L+E
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGIDL---SQVYELLEK 232
Query: 400 DMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVE 443
D C EK+ + C Q +PS RP+ ++ Q E + +
Sbjct: 233 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 276
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 107/203 (52%), Gaps = 8/203 (3%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKN 225
+F E GRG FG VY G + AVK L+R+ GE +F E +++ H N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 226 LVRLLGFCDEGQ-NRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHED 283
++ LLG C + + L+V ++ +G L +F+ P+ Q+A+G+ +L
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL--- 150
Query: 284 CSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTI--KTAIRGTKGYVAPEWY 341
S + +H D+ +N +LD+ + +++DFGLA+ + + ++ KT + ++A E
Sbjct: 151 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 342 RKSTITAKVDVYSFGVLLLEIIS 364
+ T K DV+SFGVLL E+++
Sbjct: 211 QTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 127/275 (46%), Gaps = 33/275 (12%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 229
E G G FG V+ G T VAVK L + + F E ++ Q H+ LVRL
Sbjct: 25 ERLGAGQFGEVWMGYY----NGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL 79
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+ + ++ E++ NG+L FL +K + N ++A QIA G+ ++ E
Sbjct: 80 YAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RN 135
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVAPEWYRKS 344
IH D++ NIL+ D + +I+DFGLA+L+ N+ TA G K + APE
Sbjct: 136 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY----TAREGAKFPIKWTAPEAINYG 191
Query: 345 TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAM 404
T T K DV+SFG+LL EI++ + + N ++ +E +
Sbjct: 192 TFTIKSDVWSFGILLTEIVTHGRI---------------PYPGMTNPEVIQNLERGYRMV 236
Query: 405 NDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
C E+L + C +E P RPT + +LE
Sbjct: 237 RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 127/275 (46%), Gaps = 33/275 (12%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 229
E G G FG V+ G T VAVK L + + F E ++ Q H+ LVRL
Sbjct: 14 ERLGAGQFGEVWMGYY----NGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL 68
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+ + ++ E++ NG+L FL +K + N ++A QIA G+ ++ E
Sbjct: 69 YAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RN 124
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVAPEWYRKS 344
IH D++ NIL+ D + +I+DFGLA+L+ N+ TA G K + APE
Sbjct: 125 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY----TAREGAKFPIKWTAPEAINYG 180
Query: 345 TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAM 404
T T K DV+SFG+LL EI++ + + N ++ +E +
Sbjct: 181 TFTIKSDVWSFGILLTEIVTHGRI---------------PYPGMTNPEVIQNLERGYRMV 225
Query: 405 NDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
C E+L + C +E P RPT + +LE
Sbjct: 226 RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 260
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 133/284 (46%), Gaps = 26/284 (9%)
Query: 163 EATD-NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT 221
E TD K + G G +G VY+GV + + VAVK L + E EF E V+ +
Sbjct: 16 ERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEI 71
Query: 222 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGLLY 279
H NLV+LLG C ++ EF+ G L +L + S + +A QI+ + Y
Sbjct: 72 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 131
Query: 280 LHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPE 339
L + IH D+ +N L+ +++ +++DFGL++L+T + T + + APE
Sbjct: 132 LEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 187
Query: 340 WYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEG 399
+ + K DV++FGVLL EI + Y + D ++ +L+E
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGIDL---SQVYELLEK 232
Query: 400 DMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVE 443
D C EK+ + C Q +PS RP+ ++ Q E + +
Sbjct: 233 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 276
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 132/282 (46%), Gaps = 30/282 (10%)
Query: 163 EATD-NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT 221
E TD K + G G +G VY+GV + + VAVK L + E EF E V+ +
Sbjct: 11 ERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEI 66
Query: 222 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWN--LRTNIAFQIARGLLY 279
H NLV+LLG C ++ EF+ G L +L + N + +A QI+ + Y
Sbjct: 67 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 126
Query: 280 LHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPE 339
L + IH D+ +N L+ +++ +++DFGL++L+T + T + + APE
Sbjct: 127 LEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 182
Query: 340 WYRKSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYRNGKLDDLV 397
+ + K DV++FGVLL EI + S I++ + Y +L+
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-----------------ELL 225
Query: 398 EGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
E D C EK+ + C Q +PS RP+ ++ Q E
Sbjct: 226 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 133/284 (46%), Gaps = 26/284 (9%)
Query: 163 EATD-NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT 221
E TD K + G G +G VY+GV + + VAVK L + E EF E V+ +
Sbjct: 11 ERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEI 66
Query: 222 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWN--LRTNIAFQIARGLLY 279
H NLV+LLG C ++ EF+ G L +L + N + +A QI+ + Y
Sbjct: 67 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 126
Query: 280 LHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPE 339
L + IH D+ +N L+ +++ +++DFGL++L+T + T + + APE
Sbjct: 127 LEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 182
Query: 340 WYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEG 399
+ + K DV++FGVLL EI + Y + D ++ +L+E
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGIDL---SQVYELLEK 227
Query: 400 DMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVE 443
D C EK+ + C Q +PS RP+ ++ Q E + +
Sbjct: 228 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 132/284 (46%), Gaps = 35/284 (12%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 229
E G+G FG + + T R + + +K+L R ++ ++ F EV V+ H N+++
Sbjct: 16 EVLGKGCFG---QAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKF 72
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSSQI 288
+G + + + E++ GTL + + + W+ R + A IA G+ YLH S I
Sbjct: 73 IGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNI 129
Query: 289 IHCDIKPQNILLDDHYNARISDFGLAKLLTLNQS-----KTIKTAIR-------GTKGYV 336
IH D+ N L+ ++ N ++DFGLA+L+ ++ +++K R G ++
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 337 APEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT-DWAFDCYRNGKLDD 395
APE + KVDV+SFG++L EII + +Y T D+ +
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEIIG-----RVNADPDYLPRTMDFGLN--------- 235
Query: 396 LVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
V G ++ C +++ C DP RP+ K+ LE
Sbjct: 236 -VRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLE 278
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 133/284 (46%), Gaps = 26/284 (9%)
Query: 163 EATD-NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT 221
E TD K + G G +G VY+GV + + VAVK L + E EF E V+ +
Sbjct: 24 ERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEI 79
Query: 222 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWN--LRTNIAFQIARGLLY 279
H NLV+LLG C ++ EF+ G L +L + N + +A QI+ + Y
Sbjct: 80 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 139
Query: 280 LHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPE 339
L + IH D+ +N L+ +++ +++DFGL++L+T + T + + APE
Sbjct: 140 LEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 195
Query: 340 WYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEG 399
+ + K DV++FGVLL EI + Y + D ++ +L+E
Sbjct: 196 SLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGIDL---SQVYELLEK 240
Query: 400 DMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVE 443
D C EK+ + C Q +PS RP+ ++ Q E + +
Sbjct: 241 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 284
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 133/284 (46%), Gaps = 26/284 (9%)
Query: 163 EATD-NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT 221
E TD K + G G +G VY+GV + + VAVK L + E EF E V+ +
Sbjct: 11 ERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEI 66
Query: 222 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGLLY 279
H NLV+LLG C ++ EF+ G L +L + S + +A QI+ + Y
Sbjct: 67 KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 126
Query: 280 LHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPE 339
L + IH D+ +N L+ +++ +++DFGL++L+T + T + + APE
Sbjct: 127 LEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 182
Query: 340 WYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEG 399
+ + K DV++FGVLL EI + Y + D ++ +L+E
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGIDL---SQVYELLEK 227
Query: 400 DMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVE 443
D C EK+ + C Q +PS RP+ ++ Q E + +
Sbjct: 228 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 133/284 (46%), Gaps = 26/284 (9%)
Query: 163 EATD-NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT 221
E TD K + G G +G VY+GV + + VAVK L + E EF E V+ +
Sbjct: 16 ERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEI 71
Query: 222 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWN--LRTNIAFQIARGLLY 279
H NLV+LLG C ++ EF+ G L +L + N + +A QI+ + Y
Sbjct: 72 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 131
Query: 280 LHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPE 339
L + IH D+ +N L+ +++ +++DFGL++L+T + T + + APE
Sbjct: 132 LEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 187
Query: 340 WYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEG 399
+ + K DV++FGVLL EI + Y + D ++ +L+E
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGIDL---SQVYELLEK 232
Query: 400 DMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVE 443
D C EK+ + C Q +PS RP+ ++ Q E + +
Sbjct: 233 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 276
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 133/284 (46%), Gaps = 26/284 (9%)
Query: 163 EATD-NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT 221
E TD K + G G +G VY+GV + + VAVK L + E EF E V+ +
Sbjct: 12 ERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEI 67
Query: 222 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWN--LRTNIAFQIARGLLY 279
H NLV+LLG C ++ EF+ G L +L + N + +A QI+ + Y
Sbjct: 68 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 127
Query: 280 LHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPE 339
L + IH D+ +N L+ +++ +++DFGL++L+T + T + + APE
Sbjct: 128 LEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPE 183
Query: 340 WYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEG 399
+ + K DV++FGVLL EI + Y + D ++ +L+E
Sbjct: 184 SLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGIDL---SQVYELLEK 228
Query: 400 DMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVE 443
D C EK+ + C Q +PS RP+ ++ Q E + +
Sbjct: 229 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 272
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 107/203 (52%), Gaps = 8/203 (3%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKN 225
+F E GRG FG VY G + AVK L+R+ GE +F E +++ H N
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151
Query: 226 LVRLLGFCDEGQ-NRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHED 283
++ LLG C + + L+V ++ +G L +F+ P+ Q+A+G+ +L
Sbjct: 152 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL--- 208
Query: 284 CSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTI--KTAIRGTKGYVAPEWY 341
S + +H D+ +N +LD+ + +++DFGLA+ + + ++ KT + ++A E
Sbjct: 209 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 268
Query: 342 RKSTITAKVDVYSFGVLLLEIIS 364
+ T K DV+SFGVLL E+++
Sbjct: 269 QTQKFTTKSDVWSFGVLLWELMT 291
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 107/203 (52%), Gaps = 8/203 (3%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKN 225
+F E GRG FG VY G + AVK L+R+ GE +F E +++ H N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 226 LVRLLGFCDEGQ-NRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHED 283
++ LLG C + + L+V ++ +G L +F+ P+ Q+A+G+ +L
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL--- 147
Query: 284 CSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTI--KTAIRGTKGYVAPEWY 341
S + +H D+ +N +LD+ + +++DFGLA+ + + ++ KT + ++A E
Sbjct: 148 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 207
Query: 342 RKSTITAKVDVYSFGVLLLEIIS 364
+ T K DV+SFGVLL E+++
Sbjct: 208 QTQKFTTKSDVWSFGVLLWELMT 230
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 133/284 (46%), Gaps = 26/284 (9%)
Query: 163 EATD-NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT 221
E TD K + G G +G VY+GV + + VAVK L + E EF E V+ +
Sbjct: 13 ERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEI 68
Query: 222 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWN--LRTNIAFQIARGLLY 279
H NLV+LLG C ++ EF+ G L +L + N + +A QI+ + Y
Sbjct: 69 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 128
Query: 280 LHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPE 339
L + IH D+ +N L+ +++ +++DFGL++L+T + T + + APE
Sbjct: 129 LEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPE 184
Query: 340 WYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEG 399
+ + K DV++FGVLL EI + Y + D ++ +L+E
Sbjct: 185 SLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGIDL---SQVYELLEK 229
Query: 400 DMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVE 443
D C EK+ + C Q +PS RP+ ++ Q E + +
Sbjct: 230 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 273
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 133/284 (46%), Gaps = 26/284 (9%)
Query: 163 EATD-NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT 221
E TD K + G G +G VY+GV + + VAVK L + E EF E V+ +
Sbjct: 13 ERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEI 68
Query: 222 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWN--LRTNIAFQIARGLLY 279
H NLV+LLG C ++ EF+ G L +L + N + +A QI+ + Y
Sbjct: 69 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 128
Query: 280 LHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPE 339
L + IH D+ +N L+ +++ +++DFGL++L+T + T + + APE
Sbjct: 129 LEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 184
Query: 340 WYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEG 399
+ + K DV++FGVLL EI + Y + D ++ +L+E
Sbjct: 185 SLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGIDL---SQVYELLEK 229
Query: 400 DMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVE 443
D C EK+ + C Q +PS RP+ ++ Q E + +
Sbjct: 230 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 273
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 133/284 (46%), Gaps = 26/284 (9%)
Query: 163 EATD-NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT 221
E TD K + G G +G VY+GV + + VAVK L + E EF E V+ +
Sbjct: 13 ERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEI 68
Query: 222 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWN--LRTNIAFQIARGLLY 279
H NLV+LLG C ++ EF+ G L +L + N + +A QI+ + Y
Sbjct: 69 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 128
Query: 280 LHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPE 339
L + IH D+ +N L+ +++ +++DFGL++L+T + T + + APE
Sbjct: 129 LEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 184
Query: 340 WYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEG 399
+ + K DV++FGVLL EI + Y + D ++ +L+E
Sbjct: 185 SLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGIDL---SQVYELLEK 229
Query: 400 DMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVE 443
D C EK+ + C Q +PS RP+ ++ Q E + +
Sbjct: 230 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 273
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 133/284 (46%), Gaps = 26/284 (9%)
Query: 163 EATD-NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT 221
E TD K + G G +G VY+GV + + VAVK L + E EF E V+ +
Sbjct: 11 ERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEI 66
Query: 222 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGLLY 279
H NLV+LLG C ++ EF+ G L +L + S + +A QI+ + Y
Sbjct: 67 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 126
Query: 280 LHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPE 339
L + IH D+ +N L+ +++ +++DFGL++L+T + T + + APE
Sbjct: 127 LEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 182
Query: 340 WYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEG 399
+ + K DV++FGVLL EI + Y + D ++ +L+E
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGIDL---SQVYELLEK 227
Query: 400 DMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVE 443
D C EK+ + C Q +PS RP+ ++ Q E + +
Sbjct: 228 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 133/287 (46%), Gaps = 37/287 (12%)
Query: 168 FKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNL 226
+E G G FG V +G ++ + VA+K L + + ++ EF +E ++GQ H N+
Sbjct: 20 IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 79
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAFQIARGLLYL 280
+RL G +++ EF+ NG L SFL F ++ LR IA G+ YL
Sbjct: 80 IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRG-----IASGMRYL 134
Query: 281 HEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVA 337
E +H D+ +NIL++ + ++SDFGL++ L N S +T+ G K + A
Sbjct: 135 AE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTA 191
Query: 338 PEWYRKSTITAKVDVYSFGVLLLEIISC--RKSFDIEMGEEYAILTDWAFDCYRNGKLDD 395
PE T+ D +S+G+++ E++S R +D+ N + +
Sbjct: 192 PEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMS-----------------NQDVIN 234
Query: 396 LVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
+E D C L + + C Q+D + RP +V L+ ++
Sbjct: 235 AIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMI 281
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 133/284 (46%), Gaps = 26/284 (9%)
Query: 163 EATD-NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT 221
E TD K + G G +G VY+GV + + VAVK L + E EF E V+ +
Sbjct: 11 ERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEI 66
Query: 222 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGLLY 279
H NLV+LLG C ++ EF+ G L +L + S + +A QI+ + Y
Sbjct: 67 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 126
Query: 280 LHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPE 339
L + IH D+ +N L+ +++ +++DFGL++L+T + T + + APE
Sbjct: 127 LEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 182
Query: 340 WYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEG 399
+ + K DV++FGVLL EI + Y + D ++ +L+E
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGIDL---SQVYELLEK 227
Query: 400 DMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVE 443
D C EK+ + C Q +PS RP+ ++ Q E + +
Sbjct: 228 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 107/203 (52%), Gaps = 8/203 (3%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKN 225
+F E GRG FG VY G + AVK L+R+ GE +F E +++ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 226 LVRLLGFCDEGQ-NRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHED 283
++ LLG C + + L+V ++ +G L +F+ P+ Q+A+G+ +L
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL--- 149
Query: 284 CSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTI--KTAIRGTKGYVAPEWY 341
S + +H D+ +N +LD+ + +++DFGLA+ + + ++ KT + ++A E
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
Query: 342 RKSTITAKVDVYSFGVLLLEIIS 364
+ T K DV+SFGVLL E+++
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 133/284 (46%), Gaps = 26/284 (9%)
Query: 163 EATD-NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT 221
E TD K + G G +G VY+GV + + VAVK L + E EF E V+ +
Sbjct: 11 ERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEI 66
Query: 222 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGLLY 279
H NLV+LLG C ++ EF+ G L +L + S + +A QI+ + Y
Sbjct: 67 KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 126
Query: 280 LHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPE 339
L + IH D+ +N L+ +++ +++DFGL++L+T + T + + APE
Sbjct: 127 LEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 182
Query: 340 WYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEG 399
+ + K DV++FGVLL EI + Y + D ++ +L+E
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGIDL---SQVYELLEK 227
Query: 400 DMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVE 443
D C EK+ + C Q +PS RP+ ++ Q E + +
Sbjct: 228 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 107/203 (52%), Gaps = 8/203 (3%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKN 225
+F E GRG FG VY G + AVK L+R+ GE +F E +++ H N
Sbjct: 38 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 97
Query: 226 LVRLLGFCDEGQ-NRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHED 283
++ LLG C + + L+V ++ +G L +F+ P+ Q+A+G+ +L
Sbjct: 98 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL--- 154
Query: 284 CSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTI--KTAIRGTKGYVAPEWY 341
S + +H D+ +N +LD+ + +++DFGLA+ + + ++ KT + ++A E
Sbjct: 155 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 214
Query: 342 RKSTITAKVDVYSFGVLLLEIIS 364
+ T K DV+SFGVLL E+++
Sbjct: 215 QTQKFTTKSDVWSFGVLLWELMT 237
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 107/203 (52%), Gaps = 8/203 (3%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKN 225
+F E GRG FG VY G + AVK L+R+ GE +F E +++ H N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 226 LVRLLGFCDEGQ-NRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHED 283
++ LLG C + + L+V ++ +G L +F+ P+ Q+A+G+ +L
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL--- 150
Query: 284 CSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTI--KTAIRGTKGYVAPEWY 341
S + +H D+ +N +LD+ + +++DFGLA+ + + ++ KT + ++A E
Sbjct: 151 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 342 RKSTITAKVDVYSFGVLLLEIIS 364
+ T K DV+SFGVLL E+++
Sbjct: 211 QTQKFTTKSDVWSFGVLLWELMT 233
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 141/284 (49%), Gaps = 45/284 (15%)
Query: 171 EAGRGSFGIVYKGVIE--TTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 227
E G+GSFG+VY+GV + T VA+K ++ E+ EF NE V+ + + ++V
Sbjct: 17 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 76
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK-----------PSWNLRTNIAFQIARG 276
RLLG +GQ L++ E + G L S+L +L+ PS + +A +IA G
Sbjct: 77 RLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADG 135
Query: 277 LLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKG-- 334
+ YL+ +++ +H D+ +N ++ + + +I DFG+ + + ++ + +G KG
Sbjct: 136 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIXETDXXR---KGGKGLL 187
Query: 335 ---YVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNG 391
+++PE + T DV+SFGV+L EI A L + + N
Sbjct: 188 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQGLSNE 232
Query: 392 K-LDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKV 434
+ L ++EG + D C + LL + C Q +P +RP+ ++
Sbjct: 233 QVLRFVMEGGLLDKPD-NCPDMLLELMRMCWQYNPKMRPSFLEI 275
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 132/284 (46%), Gaps = 26/284 (9%)
Query: 163 EATD-NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT 221
E TD K + G G +G VY+GV + + VAVK L + E EF E V+ +
Sbjct: 9 ERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEI 64
Query: 222 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGLLY 279
H NLV+LLG C ++ EF+ G L +L + S + +A QI+ + Y
Sbjct: 65 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 124
Query: 280 LHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPE 339
L + IH D+ +N L+ +++ +++DFGL++L+T + T + + APE
Sbjct: 125 LEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTFTAHAGAKFPIKWTAPE 180
Query: 340 WYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEG 399
+ + K DV++FGVLL EI + S + ++ +L+E
Sbjct: 181 SLAYNKFSIKSDVWAFGVLLWEIATYGMS---------------PYPGIDPSQVYELLEK 225
Query: 400 DMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVE 443
D C EK+ + C Q +PS RP+ ++ Q E + +
Sbjct: 226 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 269
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 132/287 (45%), Gaps = 37/287 (12%)
Query: 168 FKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNL 226
+E G G FG V +G ++ + VA+K L + + ++ EF +E ++GQ H N+
Sbjct: 18 IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 77
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAFQIARGLLYL 280
+RL G +++ EF+ NG L SFL F ++ LR IA G+ YL
Sbjct: 78 IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRG-----IASGMRYL 132
Query: 281 HEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVA 337
E +H D+ +NIL++ + ++SDFGL++ L N S T+ G K + A
Sbjct: 133 AE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTA 189
Query: 338 PEWYRKSTITAKVDVYSFGVLLLEIISC--RKSFDIEMGEEYAILTDWAFDCYRNGKLDD 395
PE T+ D +S+G+++ E++S R +D+ N + +
Sbjct: 190 PEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMS-----------------NQDVIN 232
Query: 396 LVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
+E D C L + + C Q+D + RP +V L+ ++
Sbjct: 233 AIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMI 279
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 16/204 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 231
G G++G V V R + AVAVK +D + D + K E+ + +H+N+V+ G
Sbjct: 16 GEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 72
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSSQ 287
EG + L E+ + G L F ++P + A Q+ G++YLH
Sbjct: 73 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 125
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVAPE ++
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 185
Query: 348 AK-VDVYSFGVLLLEIISCRKSFD 370
A+ VDV+S G++L +++ +D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 16/204 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 231
G G++G V V R + AVAVK +D + D + K E+ + +H+N+V+ G
Sbjct: 15 GEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSSQ 287
EG + L E+ + G L F ++P + A Q+ G++YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 124
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVAPE ++
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 348 AK-VDVYSFGVLLLEIISCRKSFD 370
A+ VDV+S G++L +++ +D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 16/204 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 231
G G++G V V R + AVAVK +D + D + K E+ + +H+N+V+ G
Sbjct: 15 GEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSSQ 287
EG + L E+ + G L F ++P + A Q+ G++YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 124
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVAPE ++
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 348 AK-VDVYSFGVLLLEIISCRKSFD 370
A+ VDV+S G++L +++ +D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 16/204 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 231
G G++G V V R + AVAVK +D + D + K E+ + +H+N+V+ G
Sbjct: 15 GEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSSQ 287
EG + L E+ + G L F ++P + A Q+ G++YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 124
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVAPE ++
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 348 AK-VDVYSFGVLLLEIISCRKSFD 370
A+ VDV+S G++L +++ +D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 16/204 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 231
G G++G V V R + AVAVK +D + D + K E+ + +H+N+V+ G
Sbjct: 16 GEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYG 72
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSSQ 287
EG + L E+ + G L F ++P + A Q+ G++YLH
Sbjct: 73 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 125
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVAPE ++
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 348 AK-VDVYSFGVLLLEIISCRKSFD 370
A+ VDV+S G++L +++ +D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 111/217 (51%), Gaps = 17/217 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 231
G G++G V V R + AVAVK +D + D + K E+ + +H+N+V+ G
Sbjct: 15 GEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSSQ 287
EG + L E+ + G L F ++P + A Q+ G++YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 124
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVAPE ++
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 348 AK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDW 383
A+ VDV+S G++L +++ +D + + +DW
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD-QPSDSXQEYSDW 220
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 127/275 (46%), Gaps = 33/275 (12%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 229
E G G FG V+ G T VAVK L + + F E ++ Q H+ LVRL
Sbjct: 15 ERLGAGQFGEVWMGYY----NGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL 69
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+ + ++ E++ NG+L FL +K + N ++A QIA G+ ++ E
Sbjct: 70 YAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RN 125
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVAPEWYRKS 344
IH +++ NIL+ D + +I+DFGLA+L+ N+ TA G K + APE
Sbjct: 126 YIHRNLRAANILVSDTLSCKIADFGLARLIEDNEY----TAREGAKFPIKWTAPEAINYG 181
Query: 345 TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAM 404
T T K DV+SFG+LL EI++ + + N ++ +E +
Sbjct: 182 TFTIKSDVWSFGILLTEIVTHGRI---------------PYPGMTNPEVIQNLERGYRMV 226
Query: 405 NDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
C E+L + C +E P RPT + +LE
Sbjct: 227 RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 261
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 140/284 (49%), Gaps = 45/284 (15%)
Query: 171 EAGRGSFGIVYKGVIE--TTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 227
E G+GSFG+VY+GV + T VA+K ++ E+ EF NE V+ + + ++V
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK-----------PSWNLRTNIAFQIARG 276
RLLG +GQ L++ E + G L S+L +L+ PS + +A +IA G
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADG 144
Query: 277 LLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKG-- 334
+ YL+ +++ +H D+ +N ++ + + +I DFG+ + + ++ + +G KG
Sbjct: 145 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIXETDXXR---KGGKGLL 196
Query: 335 ---YVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNG 391
+++PE + T DV+SFGV+L EI A L + + N
Sbjct: 197 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQGLSNE 241
Query: 392 K-LDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKV 434
+ L ++EG + D C + L + C Q +P +RP+ ++
Sbjct: 242 QVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEI 284
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 138/283 (48%), Gaps = 43/283 (15%)
Query: 171 EAGRGSFGIVYKGVIE--TTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 227
E G+GSFG+VY+GV + T VA+K ++ E+ EF NE V+ + + ++V
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFL------FGN----LKPSWNLRTNIAFQIARGL 277
RLLG +GQ L++ E + G L S+L N PS + +A +IA G+
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 151
Query: 278 LYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKG--- 334
YL+ +++ +H D+ +N ++ + + +I DFG+ + + ++ + +G KG
Sbjct: 152 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYR---KGGKGLLP 203
Query: 335 --YVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGK 392
+++PE + T DV+SFGV+L EI A L + + N +
Sbjct: 204 VRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQGLSNEQ 248
Query: 393 -LDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKV 434
L ++EG + D C + L + C Q +P +RP+ ++
Sbjct: 249 VLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEI 290
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 136/301 (45%), Gaps = 28/301 (9%)
Query: 141 RNSPGDGTVETNLRCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKL 200
RN P V N + +E K + G G +G VY+GV + + VAVK L
Sbjct: 239 RNKPTVYGVSPN---YDKWEMERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTL 292
Query: 201 DRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK 260
+ E EF E V+ + H NLV+LLG C ++ EF+ G L +L +
Sbjct: 293 KEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR 351
Query: 261 PSWN--LRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLT 318
N + +A QI+ + YL + IH ++ +N L+ +++ +++DFGL++L+T
Sbjct: 352 QEVNAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMT 408
Query: 319 LNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYA 378
+ T + + APE + + K DV++FGVLL EI + Y
Sbjct: 409 -GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------------YG 455
Query: 379 ILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQML 438
+ D ++ +L+E D C EK+ + C Q +PS RP+ ++ Q
Sbjct: 456 MSPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 512
Query: 439 E 439
E
Sbjct: 513 E 513
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 16/204 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 231
G G++G V V R + AVAVK +D + D + K E+ + +H+N+V+ G
Sbjct: 15 GEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSSQ 287
EG + L E+ + G L F ++P + A Q+ G++YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 124
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVAPE ++
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 348 AK-VDVYSFGVLLLEIISCRKSFD 370
A+ VDV+S G++L +++ +D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 16/204 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 231
G G++G V V R + AVAVK +D + D + K E+ + +H+N+V+ G
Sbjct: 15 GEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSSQ 287
EG + L E+ + G L F ++P + A Q+ G++YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 124
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVAPE ++
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 348 AK-VDVYSFGVLLLEIISCRKSFD 370
A+ VDV+S G++L +++ +D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 16/204 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 231
G G++G V V R + AVAVK +D + D + K E+ + +H+N+V+ G
Sbjct: 16 GEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSSQ 287
EG + L E+ + G L F ++P + A Q+ G++YLH
Sbjct: 73 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 125
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVAPE ++
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 348 AK-VDVYSFGVLLLEIISCRKSFD 370
A+ VDV+S G++L +++ +D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 136/301 (45%), Gaps = 28/301 (9%)
Query: 141 RNSPGDGTVETNLRCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKL 200
RN P V N + +E K + G G +G VY+GV + + VAVK L
Sbjct: 200 RNKPTIYGVSPN---YDKWEMERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTL 253
Query: 201 DRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF--GN 258
+ E EF E V+ + H NLV+LLG C ++ EF+ G L +L
Sbjct: 254 KEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR 312
Query: 259 LKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLT 318
+ S + +A QI+ + YL + IH ++ +N L+ +++ +++DFGL++L+T
Sbjct: 313 QEVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMT 369
Query: 319 LNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYA 378
+ T + + APE + + K DV++FGVLL EI + Y
Sbjct: 370 -GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------------YG 416
Query: 379 ILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQML 438
+ D ++ +L+E D C EK+ + C Q +PS RP+ ++ Q
Sbjct: 417 MSPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 473
Query: 439 E 439
E
Sbjct: 474 E 474
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 138/283 (48%), Gaps = 43/283 (15%)
Query: 171 EAGRGSFGIVYKGVIE--TTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 227
E G+GSFG+VY+GV + T VA+K ++ E+ EF NE V+ + + ++V
Sbjct: 22 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 81
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFL------FGN----LKPSWNLRTNIAFQIARGL 277
RLLG +GQ L++ E + G L S+L N PS + +A +IA G+
Sbjct: 82 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 141
Query: 278 LYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKG--- 334
YL+ +++ +H D+ +N ++ + + +I DFG+ + + ++ + +G KG
Sbjct: 142 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYR---KGGKGLLP 193
Query: 335 --YVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGK 392
+++PE + T DV+SFGV+L EI A L + + N +
Sbjct: 194 VRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQGLSNEQ 238
Query: 393 -LDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKV 434
L ++EG + D C + L + C Q +P +RP+ ++
Sbjct: 239 VLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEI 280
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 16/204 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 231
G G++G V V R + AVAVK +D + D + K E+ + +H+N+V+ G
Sbjct: 15 GEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSSQ 287
EG + L E+ + G L F ++P + A Q+ G++YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 124
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVAPE ++
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 348 AK-VDVYSFGVLLLEIISCRKSFD 370
A+ VDV+S G++L +++ +D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 16/204 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 231
G G++G V V R + AVAVK +D + D + K E+ + +H+N+V+ G
Sbjct: 16 GEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSSQ 287
EG + L E+ + G L F ++P + A Q+ G++YLH
Sbjct: 73 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 125
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVAPE ++
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 348 AK-VDVYSFGVLLLEIISCRKSFD 370
A+ VDV+S G++L +++ +D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 16/204 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 231
G G++G V V R + AVAVK +D + D + K E+ + +H+N+V+ G
Sbjct: 15 GEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSSQ 287
EG + L E+ + G L F ++P + A Q+ G++YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 124
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVAPE ++
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 348 AK-VDVYSFGVLLLEIISCRKSFD 370
A+ VDV+S G++L +++ +D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 16/204 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 231
G G++G V V R + AVAVK +D + D + K E+ + +H+N+V+ G
Sbjct: 16 GEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSSQ 287
EG + L E+ + G L F ++P + A Q+ G++YLH
Sbjct: 73 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 125
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVAPE ++
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 348 AK-VDVYSFGVLLLEIISCRKSFD 370
A+ VDV+S G++L +++ +D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 16/204 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 231
G G++G V V R + AVAVK +D + D + K E+ + +H+N+V+ G
Sbjct: 16 GEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSSQ 287
EG + L E+ + G L F ++P + A Q+ G++YLH
Sbjct: 73 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 125
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVAPE ++
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 348 AK-VDVYSFGVLLLEIISCRKSFD 370
A+ VDV+S G++L +++ +D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 16/204 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 231
G G++G V V R + AVAVK +D + D + K E+ + +H+N+V+ G
Sbjct: 16 GEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSSQ 287
EG + L E+ + G L F ++P + A Q+ G++YLH
Sbjct: 73 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 125
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVAPE ++
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 348 AK-VDVYSFGVLLLEIISCRKSFD 370
A+ VDV+S G++L +++ +D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 16/204 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 231
G G++G V V R + AVAVK +D + D + K E+ + +H+N+V+ G
Sbjct: 15 GEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSSQ 287
EG + L E+ + G L F ++P + A Q+ G++YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 124
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVAPE ++
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 348 AK-VDVYSFGVLLLEIISCRKSFD 370
A+ VDV+S G++L +++ +D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 16/204 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 231
G G++G V V R + AVAVK +D + D + K E+ + +H+N+V+ G
Sbjct: 15 GEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSSQ 287
EG + L E+ + G L F ++P + A Q+ G++YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 124
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVAPE ++
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 348 AK-VDVYSFGVLLLEIISCRKSFD 370
A+ VDV+S G++L +++ +D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 16/204 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 231
G G++G V V R + AVAVK +D + D + K E+ + +H+N+V+ G
Sbjct: 16 GEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSSQ 287
EG + L E+ + G L F ++P + A Q+ G++YLH
Sbjct: 73 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 125
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVAPE ++
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 348 AK-VDVYSFGVLLLEIISCRKSFD 370
A+ VDV+S G++L +++ +D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 16/204 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 231
G G++G V V R + AVAVK +D + D + K E+ + +H+N+V+ G
Sbjct: 15 GEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSSQ 287
EG + L E+ + G L F ++P + A Q+ G++YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 124
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVAPE ++
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 348 AK-VDVYSFGVLLLEIISCRKSFD 370
A+ VDV+S G++L +++ +D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 136/301 (45%), Gaps = 28/301 (9%)
Query: 141 RNSPGDGTVETNLRCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKL 200
RN P V N + +E K + G G +G VY+GV + + VAVK L
Sbjct: 197 RNKPTVYGVSPNYDKWE---MERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTL 250
Query: 201 DRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK 260
+ E EF E V+ + H NLV+LLG C ++ EF+ G L +L +
Sbjct: 251 KEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR 309
Query: 261 PSWN--LRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLT 318
N + +A QI+ + YL + IH ++ +N L+ +++ +++DFGL++L+T
Sbjct: 310 QEVNAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMT 366
Query: 319 LNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYA 378
+ T + + APE + + K DV++FGVLL EI + Y
Sbjct: 367 -GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------------YG 413
Query: 379 ILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQML 438
+ D ++ +L+E D C EK+ + C Q +PS RP+ ++ Q
Sbjct: 414 MSPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 470
Query: 439 E 439
E
Sbjct: 471 E 471
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 16/204 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 231
G G++G V V R + AVAVK +D + D + K E+ + +H+N+V+ G
Sbjct: 14 GEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 70
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSSQ 287
EG + L E+ + G L F ++P + A Q+ G++YLH
Sbjct: 71 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 123
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVAPE ++
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 183
Query: 348 AK-VDVYSFGVLLLEIISCRKSFD 370
A+ VDV+S G++L +++ +D
Sbjct: 184 AEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 140/284 (49%), Gaps = 45/284 (15%)
Query: 171 EAGRGSFGIVYKGVIE--TTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 227
E G+GSFG+VY+GV + T VA+K ++ E+ EF NE V+ + + ++V
Sbjct: 23 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 82
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK-----------PSWNLRTNIAFQIARG 276
RLLG +GQ L++ E + G L S+L +L+ PS + +A +IA G
Sbjct: 83 RLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADG 141
Query: 277 LLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKG-- 334
+ YL+ +++ +H D+ +N ++ + + +I DFG+ + + ++ + +G KG
Sbjct: 142 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYR---KGGKGLL 193
Query: 335 ---YVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNG 391
+++PE + T DV+SFGV+L EI A L + + N
Sbjct: 194 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQGLSNE 238
Query: 392 K-LDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKV 434
+ L ++EG + D C + L + C Q +P +RP+ ++
Sbjct: 239 QVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEI 281
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 140/284 (49%), Gaps = 45/284 (15%)
Query: 171 EAGRGSFGIVYKGVIE--TTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 227
E G+GSFG+VY+GV + T VA+K ++ E+ EF NE V+ + + ++V
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK-----------PSWNLRTNIAFQIARG 276
RLLG +GQ L++ E + G L S+L +L+ PS + +A +IA G
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADG 143
Query: 277 LLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKG-- 334
+ YL+ +++ +H D+ +N ++ + + +I DFG+ + + ++ + +G KG
Sbjct: 144 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYR---KGGKGLL 195
Query: 335 ---YVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNG 391
+++PE + T DV+SFGV+L EI A L + + N
Sbjct: 196 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQGLSNE 240
Query: 392 K-LDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKV 434
+ L ++EG + D C + L + C Q +P +RP+ ++
Sbjct: 241 QVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEI 283
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 140/284 (49%), Gaps = 45/284 (15%)
Query: 171 EAGRGSFGIVYKGVIE--TTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 227
E G+GSFG+VY+GV + T VA+K ++ E+ EF NE V+ + + ++V
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK-----------PSWNLRTNIAFQIARG 276
RLLG +GQ L++ E + G L S+L +L+ PS + +A +IA G
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADG 150
Query: 277 LLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKG-- 334
+ YL+ +++ +H D+ +N ++ + + +I DFG+ + + ++ + +G KG
Sbjct: 151 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYR---KGGKGLL 202
Query: 335 ---YVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNG 391
+++PE + T DV+SFGV+L EI A L + + N
Sbjct: 203 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQGLSNE 247
Query: 392 K-LDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKV 434
+ L ++EG + D C + L + C Q +P +RP+ ++
Sbjct: 248 QVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEI 290
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 140/284 (49%), Gaps = 45/284 (15%)
Query: 171 EAGRGSFGIVYKGVIE--TTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 227
E G+GSFG+VY+GV + T VA+K ++ E+ EF NE V+ + + ++V
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK-----------PSWNLRTNIAFQIARG 276
RLLG +GQ L++ E + G L S+L +L+ PS + +A +IA G
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADG 144
Query: 277 LLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKG-- 334
+ YL+ +++ +H D+ +N ++ + + +I DFG+ + + ++ + +G KG
Sbjct: 145 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYR---KGGKGLL 196
Query: 335 ---YVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNG 391
+++PE + T DV+SFGV+L EI A L + + N
Sbjct: 197 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQGLSNE 241
Query: 392 K-LDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKV 434
+ L ++EG + D C + L + C Q +P +RP+ ++
Sbjct: 242 QVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEI 284
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 140/284 (49%), Gaps = 45/284 (15%)
Query: 171 EAGRGSFGIVYKGVIE--TTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 227
E G+GSFG+VY+GV + T VA+K ++ E+ EF NE V+ + + ++V
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK-----------PSWNLRTNIAFQIARG 276
RLLG +GQ L++ E + G L S+L +L+ PS + +A +IA G
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 277 LLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKG-- 334
+ YL+ +++ +H D+ +N ++ + + +I DFG+ + + ++ + +G KG
Sbjct: 138 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYR---KGGKGLL 189
Query: 335 ---YVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNG 391
+++PE + T DV+SFGV+L EI A L + + N
Sbjct: 190 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQGLSNE 234
Query: 392 K-LDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKV 434
+ L ++EG + D C + L + C Q +P +RP+ ++
Sbjct: 235 QVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEI 277
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 140/284 (49%), Gaps = 45/284 (15%)
Query: 171 EAGRGSFGIVYKGVIE--TTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 227
E G+GSFG+VY+GV + T VA+K ++ E+ EF NE V+ + + ++V
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK-----------PSWNLRTNIAFQIARG 276
RLLG +GQ L++ E + G L S+L +L+ PS + +A +IA G
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 277 LLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKG-- 334
+ YL+ +++ +H D+ +N + + + +I DFG+ + + ++ + +G KG
Sbjct: 138 MAYLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTR--DIYETDYYR---KGGKGLL 189
Query: 335 ---YVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNG 391
+++PE + T DV+SFGV+L EI A L + + N
Sbjct: 190 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQGLSNE 234
Query: 392 K-LDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKV 434
+ L ++EG + D C + LL + C Q +P +RP+ ++
Sbjct: 235 QVLRFVMEGGLLDKPD-NCPDMLLELMRMCWQYNPKMRPSFLEI 277
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 140/284 (49%), Gaps = 45/284 (15%)
Query: 171 EAGRGSFGIVYKGVIE--TTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 227
E G+GSFG+VY+GV + T VA+K ++ E+ EF NE V+ + + ++V
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK-----------PSWNLRTNIAFQIARG 276
RLLG +GQ L++ E + G L S+L +L+ PS + +A +IA G
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADG 143
Query: 277 LLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKG-- 334
+ YL+ +++ +H D+ +N ++ + + +I DFG+ + + ++ + +G KG
Sbjct: 144 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYR---KGGKGLL 195
Query: 335 ---YVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNG 391
+++PE + T DV+SFGV+L EI A L + + N
Sbjct: 196 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQGLSNE 240
Query: 392 K-LDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKV 434
+ L ++EG + D C + L + C Q +P +RP+ ++
Sbjct: 241 QVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEI 283
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 140/284 (49%), Gaps = 45/284 (15%)
Query: 171 EAGRGSFGIVYKGVIE--TTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 227
E G+GSFG+VY+GV + T VA+K ++ E+ EF NE V+ + + ++V
Sbjct: 54 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 113
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK-----------PSWNLRTNIAFQIARG 276
RLLG +GQ L++ E + G L S+L +L+ PS + +A +IA G
Sbjct: 114 RLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADG 172
Query: 277 LLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKG-- 334
+ YL+ +++ +H D+ +N ++ + + +I DFG+ + + ++ + +G KG
Sbjct: 173 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYR---KGGKGLL 224
Query: 335 ---YVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNG 391
+++PE + T DV+SFGV+L EI A L + + N
Sbjct: 225 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQGLSNE 269
Query: 392 K-LDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKV 434
+ L ++EG + D C + L + C Q +P +RP+ ++
Sbjct: 270 QVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEI 312
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 117/233 (50%), Gaps = 15/233 (6%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDR--VFQDGE-KEFKNEVVVIGQTHHKNLVRL 229
G+GSF VY+ E+ T VA+K +D+ +++ G + +NEV + Q H +++ L
Sbjct: 20 GKGSFAGVYRA--ESIHTGL-EVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILEL 76
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP-SWNLRTNIAFQIARGLLYLHEDCSSQI 288
+ ++ LV E +NG + +L +KP S N + QI G+LYLH S I
Sbjct: 77 YNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---SHGI 133
Query: 289 IHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITA 348
+H D+ N+LL + N +I+DFGLA L + K + GT Y++PE +S
Sbjct: 134 LHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEK--HYTLCGTPNYISPEIATRSAHGL 191
Query: 349 KVDVYSFGVLLLEIISCRKSFDIEMGEEY---AILTDWAFDCYRNGKLDDLVE 398
+ DV+S G + ++ R FD + + +L D+ + + + DL+
Sbjct: 192 ESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIH 244
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 124/272 (45%), Gaps = 27/272 (9%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 229
E G G G V+ G T VAVK L + + F E ++ Q H+ LVRL
Sbjct: 19 ERLGAGQAGEVWMGYY----NGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL 73
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+ + ++ E++ NG+L FL +K + N ++A QIA G+ ++ E
Sbjct: 74 YAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RN 129
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
IH D++ NIL+ D + +I+DFGLA+L+ + T + + + APE T T
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIE-DAEXTAREGAKFPIKWTAPEAINYGTFT 188
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
K DV+SFG+LL EI++ + + N ++ +E +
Sbjct: 189 IKSDVWSFGILLTEIVTHGRI---------------PYPGMTNPEVIQNLERGYRMVRPD 233
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
C E+L + C +E P RPT + +LE
Sbjct: 234 NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 105/204 (51%), Gaps = 16/204 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 231
G G+ G V V R + AVAVK +D + D + K E+ + +H+N+V+ G
Sbjct: 15 GEGAAGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSSQ 287
EG + L E+ + G L F ++P + A Q+ G++YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 124
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVAPE ++
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 348 AK-VDVYSFGVLLLEIISCRKSFD 370
A+ VDV+S G++L +++ +D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 135/295 (45%), Gaps = 41/295 (13%)
Query: 171 EAGRGSFGIVYKGVIE--TTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 227
E G+GSFG+VY+G + T VAVK ++ E+ EF NE V+ ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFLF----------GNLKPSWNLRTNIAFQIARGL 277
RLLG +GQ L+V E + +G L S+L G P+ +A +IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 278 LYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKG--- 334
YL+ + + +H D+ +N ++ + +I DFG+ + + ++ + +G KG
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXR---KGGKGLLP 195
Query: 335 --YVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGK 392
++APE + T D++SFGV+L EI S L + + N +
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQ 240
Query: 393 LDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEVDVP 447
+ V C E++ + C Q +P++RPT ++ +L+ + P
Sbjct: 241 VLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSFP 295
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 125/272 (45%), Gaps = 33/272 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+G FG V+ G T TT VA+K L E F E V+ + H+ LV+L
Sbjct: 27 GQGCFGEVWMG----TWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 81
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGLLYLHEDCSSQIIH 290
E + +V E+++ G+L FL G + L ++A QIA G+ Y+ +H
Sbjct: 82 VSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 137
Query: 291 CDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVAPEWYRKSTIT 347
D++ NIL+ ++ +++DFGLA+L+ N+ TA +G K + APE T
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEX----TARQGAKFPIKWTAPEAALYGRFT 193
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
K DV+SFG+LL E+ + + + N ++ D VE
Sbjct: 194 IKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQVERGYRMPCPP 238
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
+C E L + C ++DP RPT + LE
Sbjct: 239 ECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 134/295 (45%), Gaps = 41/295 (13%)
Query: 171 EAGRGSFGIVYKGVIE--TTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 227
E G+GSFG+VY+G + T VAVK ++ E+ EF NE V+ ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFLF----------GNLKPSWNLRTNIAFQIARGL 277
RLLG +GQ L+V E + +G L S+L G P+ +A +IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 278 LYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKG--- 334
YL+ + + +H D+ +N ++ + +I DFG+ + + ++ + +G KG
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXR---KGGKGLLP 195
Query: 335 --YVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGK 392
++APE + T D++SFGV+L EI S L + + N +
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQ 240
Query: 393 LDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEVDVP 447
+ V C E++ + C Q +P +RPT ++ +L+ + P
Sbjct: 241 VLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP 295
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 134/295 (45%), Gaps = 41/295 (13%)
Query: 171 EAGRGSFGIVYKGVIE--TTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 227
E G+GSFG+VY+G + T VAVK ++ E+ EF NE V+ ++V
Sbjct: 21 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 80
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFLF----------GNLKPSWNLRTNIAFQIARGL 277
RLLG +GQ L+V E + +G L S+L G P+ +A +IA G+
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 278 LYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKG--- 334
YL+ + + +H D+ +N ++ + +I DFG+ + + ++ + +G KG
Sbjct: 141 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXR---KGGKGLLP 192
Query: 335 --YVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGK 392
++APE + T D++SFGV+L EI S L + + N +
Sbjct: 193 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQ 237
Query: 393 LDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEVDVP 447
+ V C E++ + C Q +P +RPT ++ +L+ + P
Sbjct: 238 VLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP 292
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 125/272 (45%), Gaps = 33/272 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+G FG V+ G T TT VA+K L E F E V+ + H+ LV+L
Sbjct: 27 GQGCFGEVWMG----TWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 81
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGLLYLHEDCSSQIIH 290
E + +V E+++ G+L FL G + L ++A QIA G+ Y+ +H
Sbjct: 82 VSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 137
Query: 291 CDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVAPEWYRKSTIT 347
D++ NIL+ ++ +++DFGLA+L+ N+ TA +G K + APE T
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEY----TARQGAKFPIKWTAPEAALYGRFT 193
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
K DV+SFG+LL E+ + + + N ++ D VE
Sbjct: 194 IKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQVERGYRMPCPP 238
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
+C E L + C ++DP RPT + LE
Sbjct: 239 ECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 125/272 (45%), Gaps = 33/272 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+G FG V+ G T TT VA+K L E F E V+ + H+ LV+L
Sbjct: 16 GQGCFGEVWMG----TWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 70
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGLLYLHEDCSSQIIH 290
E + +V E+++ G+L FL G + L ++A QIA G+ Y+ +H
Sbjct: 71 VSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 126
Query: 291 CDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVAPEWYRKSTIT 347
D++ NIL+ ++ +++DFGLA+L+ N+ TA +G K + APE T
Sbjct: 127 RDLRAANILVGENLVCKVADFGLARLIEDNEY----TARQGAKFPIKWTAPEAALYGRFT 182
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
K DV+SFG+LL E+ + + + N ++ D VE
Sbjct: 183 IKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQVERGYRMPCPP 227
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
+C E L + C ++DP RPT + LE
Sbjct: 228 ECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 259
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 125/272 (45%), Gaps = 33/272 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+G FG V+ G T TT VA+K L E F E V+ + H+ LV+L
Sbjct: 18 GQGCFGEVWMG----TWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 72
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGLLYLHEDCSSQIIH 290
E + +V E+++ G+L FL G + L ++A QIA G+ Y+ +H
Sbjct: 73 VSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 128
Query: 291 CDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVAPEWYRKSTIT 347
D++ NIL+ ++ +++DFGLA+L+ N+ TA +G K + APE T
Sbjct: 129 RDLRAANILVGENLVCKVADFGLARLIEDNEY----TARQGAKFPIKWTAPEAALYGRFT 184
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
K DV+SFG+LL E+ + + + N ++ D VE
Sbjct: 185 IKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQVERGYRMPCPP 229
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
+C E L + C ++DP RPT + LE
Sbjct: 230 ECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 261
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 133/297 (44%), Gaps = 45/297 (15%)
Query: 171 EAGRGSFGIVYKGVIE--TTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 227
E G+GSFG+VY+G + T VAVK ++ E+ EF NE V+ ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFLF----------GNLKPSWNLRTNIAFQIARGL 277
RLLG +GQ L+V E + +G L S+L G P+ +A +IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 278 LYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAI--RGTKG- 334
YL+ + + +H D+ +N ++ + +I DFG+ + +TA +G KG
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR-------DIYETAYYRKGGKGL 193
Query: 335 ----YVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN 390
++APE + T D++SFGV+L EI S L + + N
Sbjct: 194 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSN 238
Query: 391 GKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEVDVP 447
++ V C E++ + C Q +P +RPT ++ +L+ + P
Sbjct: 239 EQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP 295
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 125/272 (45%), Gaps = 33/272 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+G FG V+ G T TT VA+K L E F E V+ + H+ LV+L
Sbjct: 27 GQGCFGEVWMG----TWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKIRHEKLVQLYAV 81
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGLLYLHEDCSSQIIH 290
E + +V E+++ G+L FL G + L ++A QIA G+ Y+ +H
Sbjct: 82 VSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 137
Query: 291 CDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVAPEWYRKSTIT 347
D++ NIL+ ++ +++DFGLA+L+ N+ TA +G K + APE T
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEY----TARQGAKFPIKWTAPEAALYGRFT 193
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
K DV+SFG+LL E+ + + + N ++ D VE
Sbjct: 194 IKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQVERGYRMPCPP 238
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
+C E L + C ++DP RPT + LE
Sbjct: 239 ECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 125/272 (45%), Gaps = 33/272 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+G FG V+ G T TT VA+K L E F E V+ + H+ LV+L
Sbjct: 27 GQGCFGEVWMG----TWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 81
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGLLYLHEDCSSQIIH 290
E + +V E+++ G+L FL G + L ++A QIA G+ Y+ +H
Sbjct: 82 VSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 137
Query: 291 CDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVAPEWYRKSTIT 347
D++ NIL+ ++ +++DFGLA+L+ N+ TA +G K + APE T
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEY----TARQGAKFPIKWTAPEAALYGRFT 193
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
K DV+SFG+LL E+ + + + N ++ D VE
Sbjct: 194 IKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQVERGYRMPCPP 238
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
+C E L + C ++DP RPT + LE
Sbjct: 239 ECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 125/272 (45%), Gaps = 33/272 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+G FG V+ G T TT VA+K L E F E V+ + H+ LV+L
Sbjct: 27 GQGCFGEVWMG----TWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 81
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGLLYLHEDCSSQIIH 290
E + +V E+++ G+L FL G + L ++A QIA G+ Y+ +H
Sbjct: 82 VSE-EPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 137
Query: 291 CDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVAPEWYRKSTIT 347
D++ NIL+ ++ +++DFGLA+L+ N+ TA +G K + APE T
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEY----TARQGAKFPIKWTAPEAALYGRFT 193
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
K DV+SFG+LL E+ + + + N ++ D VE
Sbjct: 194 IKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQVERGYRMPCPP 238
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
+C E L + C ++DP RPT + LE
Sbjct: 239 ECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 137/303 (45%), Gaps = 34/303 (11%)
Query: 156 FSYKALEEATDNFKEEA-----------GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVF 204
F+++ EA F +E G G FG V G ++ VA+K L +
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 205 QDGEK-EFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSW 263
+ ++ +F +E ++GQ H N++ L G + +++ EF+ NG+L SFL N
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFT 133
Query: 264 NLR-TNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQS 322
++ + IA G+ YL +H D+ +NIL++ + ++SDFGL++ L + S
Sbjct: 134 VIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS 190
Query: 323 KTIKTAIRGTK---GYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAI 379
T+ G K + APE + T+ DV+S+G+++ E++S Y
Sbjct: 191 DPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS------------YGE 238
Query: 380 LTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
W N + + +E D + C L + + C Q+D + RP ++ L+
Sbjct: 239 RPYWDM---TNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLD 295
Query: 440 GVV 442
++
Sbjct: 296 KMI 298
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 124/272 (45%), Gaps = 33/272 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+G FG V+ G T TT VA+K L E F E V+ + H+ LV+L
Sbjct: 27 GQGCFGEVWMG----TWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 81
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGLLYLHEDCSSQIIH 290
E + +V E+++ G L FL G + L ++A QIA G+ Y+ +H
Sbjct: 82 VSE-EPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 137
Query: 291 CDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVAPEWYRKSTIT 347
D++ NIL+ ++ +++DFGLA+L+ N+ TA +G K + APE T
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEY----TARQGAKFPIKWTAPEAALYGRFT 193
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
K DV+SFG+LL E+ + + + N ++ D VE
Sbjct: 194 IKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQVERGYRMPCPP 238
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
+C E L + C ++DP RPT + LE
Sbjct: 239 ECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 134/295 (45%), Gaps = 41/295 (13%)
Query: 171 EAGRGSFGIVYKGVIE--TTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 227
E G+GSFG+VY+G + T VAVK ++ E+ EF NE V+ ++V
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFLF----------GNLKPSWNLRTNIAFQIARGL 277
RLLG +GQ L+V E + +G L S+L G P+ +A +IA G+
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 278 LYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKG--- 334
YL+ + + +H D+ +N ++ + +I DFG+ + + ++ + +G KG
Sbjct: 143 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYR---KGGKGLLP 194
Query: 335 --YVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGK 392
++APE + T D++SFGV+L EI S L + + N +
Sbjct: 195 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQ 239
Query: 393 LDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEVDVP 447
+ V C E++ + C Q +P +RPT ++ +L+ + P
Sbjct: 240 VLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP 294
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 134/295 (45%), Gaps = 41/295 (13%)
Query: 171 EAGRGSFGIVYKGVIE--TTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 227
E G+GSFG+VY+G + T VAVK ++ E+ EF NE V+ ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFLF----------GNLKPSWNLRTNIAFQIARGL 277
RLLG +GQ L+V E + +G L S+L G P+ +A +IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 278 LYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKG--- 334
YL+ + + +H D+ +N ++ + +I DFG+ + + ++ + +G KG
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYR---KGGKGLLP 195
Query: 335 --YVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGK 392
++APE + T D++SFGV+L EI S L + + N +
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQ 240
Query: 393 LDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEVDVP 447
+ V C E++ + C Q +P +RPT ++ +L+ + P
Sbjct: 241 VLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP 295
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 135/290 (46%), Gaps = 50/290 (17%)
Query: 173 GRGSFGIVYKGVIETTR-TSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLVRLL 230
G G FG VYKG+++T+ VA+K L + + ++ +F E ++GQ H N++RL
Sbjct: 53 GAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLE 112
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAFQIARGLLYLHEDC 284
G + + +++ E++ NG L FL F L+ LR IA G+ YL
Sbjct: 113 GVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRG-----IAAGMKYL---A 164
Query: 285 SSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVAPEWY 341
+ +H D+ +NIL++ + ++SDFGL+++L + T T+ G K + APE
Sbjct: 165 NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTS--GGKIPIRWTAPEAI 222
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDM 401
T+ DV+SFG+++ E+++ Y W + M
Sbjct: 223 SYRKFTSASDVWSFGIVMWEVMT------------YGERPYWELSNHEV----------M 260
Query: 402 EAMND-------IKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEV 444
+A+ND + C + + + C Q++ + RP + +L+ ++
Sbjct: 261 KAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 310
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 124/272 (45%), Gaps = 33/272 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+G FG V+ G T TT VA+K L E F E V+ + H+ LV+L
Sbjct: 27 GQGCFGEVWMG----TWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 81
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGLLYLHEDCSSQIIH 290
E + +V E+++ G L FL G + L ++A QIA G+ Y+ +H
Sbjct: 82 VSE-EPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 137
Query: 291 CDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVAPEWYRKSTIT 347
D++ NIL+ ++ +++DFGLA+L+ N+ TA +G K + APE T
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEY----TARQGAKFPIKWTAPEAALYGRFT 193
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
K DV+SFG+LL E+ + + + N ++ D VE
Sbjct: 194 IKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQVERGYRMPCPP 238
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
+C E L + C ++DP RPT + LE
Sbjct: 239 ECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 124/272 (45%), Gaps = 33/272 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+G FG V+ G T TT VA+K L E F E V+ + H+ LV+L
Sbjct: 27 GQGCFGEVWMG----TWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 81
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGLLYLHEDCSSQIIH 290
E + +V E+++ G+L FL G + L ++A QIA G+ Y+ +H
Sbjct: 82 VSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 137
Query: 291 CDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVAPEWYRKSTIT 347
D+ NIL+ ++ +++DFGLA+L+ N+ TA +G K + APE T
Sbjct: 138 RDLAAANILVGENLVCKVADFGLARLIEDNEY----TARQGAKFPIKWTAPEAALYGRFT 193
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
K DV+SFG+LL E+ + + + N ++ D VE
Sbjct: 194 IKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQVERGYRMPCPP 238
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
+C E L + C ++DP RPT + LE
Sbjct: 239 ECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 134/271 (49%), Gaps = 32/271 (11%)
Query: 173 GRGSFGIVYKGV-IETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 228
G G FG V+KGV I + V +K ++ + G + F+ + ++ IG H ++VR
Sbjct: 40 GSGVFGTVHKGVWIPEGESIKIPVCIKVIED--KSGRQSFQAVTDHMLAIGSLDHAHIVR 97
Query: 229 LLGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCS 285
LLG C G + LV ++L G+L + G L P L N QIA+G+ YL E
Sbjct: 98 LLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGP--QLLLNWGVQIAKGMYYLEEHG- 153
Query: 286 SQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKST 345
++H ++ +N+LL +++DFG+A LL + + + + + ++A E
Sbjct: 154 --MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK 211
Query: 346 ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVE-GDMEAM 404
T + DV+S+GV + E+++ E YA L R ++ DL+E G+ A
Sbjct: 212 YTHQSDVWSYGVTVWELMTFG-------AEPYAGL--------RLAEVPDLLEKGERLAQ 256
Query: 405 NDIKCVEKLLMVSIWCIQEDPSLRPTMRKVS 435
I C + MV + C D ++RPT ++++
Sbjct: 257 PQI-CTIDVYMVMVKCWMIDENIRPTFKELA 286
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 134/271 (49%), Gaps = 32/271 (11%)
Query: 173 GRGSFGIVYKGV-IETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 228
G G FG V+KGV I + V +K ++ + G + F+ + ++ IG H ++VR
Sbjct: 22 GSGVFGTVHKGVWIPEGESIKIPVCIKVIED--KSGRQSFQAVTDHMLAIGSLDHAHIVR 79
Query: 229 LLGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCS 285
LLG C G + LV ++L G+L + G L P L N QIA+G+ YL E
Sbjct: 80 LLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGP--QLLLNWGVQIAKGMYYLEEHG- 135
Query: 286 SQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKST 345
++H ++ +N+LL +++DFG+A LL + + + + + ++A E
Sbjct: 136 --MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK 193
Query: 346 ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVE-GDMEAM 404
T + DV+S+GV + E+++ E YA L R ++ DL+E G+ A
Sbjct: 194 YTHQSDVWSYGVTVWELMTFG-------AEPYAGL--------RLAEVPDLLEKGERLAQ 238
Query: 405 NDIKCVEKLLMVSIWCIQEDPSLRPTMRKVS 435
I C + MV + C D ++RPT ++++
Sbjct: 239 PQI-CTIDVYMVMVKCWMIDENIRPTFKELA 268
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 135/295 (45%), Gaps = 41/295 (13%)
Query: 171 EAGRGSFGIVYKGVIE--TTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 227
E G+GSFG+VY+G + T VAVK ++ E+ EF NE V+ ++V
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFLF----------GNLKPSWNLRTNIAFQIARGL 277
RLLG +GQ L+V E + +G L S+L G P+ +A +IA G+
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 278 LYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKG--- 334
YL+ + + +H ++ +N ++ + +I DFG+ + + ++ + +G KG
Sbjct: 145 AYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYR---KGGKGLLP 196
Query: 335 --YVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGK 392
++APE + T D++SFGV+L EI S L + + N +
Sbjct: 197 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQ 241
Query: 393 LDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEVDVP 447
+ V C E++ + C Q +P++RPT ++ +L+ + P
Sbjct: 242 VLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSFP 296
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 135/295 (45%), Gaps = 41/295 (13%)
Query: 171 EAGRGSFGIVYKGVIE--TTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 227
E G+GSFG+VY+G + T VAVK ++ E+ EF NE V+ ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFLF----------GNLKPSWNLRTNIAFQIARGL 277
RLLG +GQ L+V E + +G L S+L G P+ +A +IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 278 LYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKG--- 334
YL+ + + +H ++ +N ++ + +I DFG+ + + ++ + +G KG
Sbjct: 144 AYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYR---KGGKGLLP 195
Query: 335 --YVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGK 392
++APE + T D++SFGV+L EI S L + + N +
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQ 240
Query: 393 LDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEVDVP 447
+ V C E++ + C Q +P++RPT ++ +L+ + P
Sbjct: 241 VLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSFP 295
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 124/272 (45%), Gaps = 33/272 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+G FG V+ G T TT VA+K L E F E V+ + H+ LV+L
Sbjct: 24 GQGCFGEVWMG----TWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 78
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGLLYLHEDCSSQIIH 290
E + +V E++N G+L FL G L +++ QIA G+ Y+ +H
Sbjct: 79 VSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER---MNYVH 134
Query: 291 CDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVAPEWYRKSTIT 347
D++ NIL+ ++ +++DFGLA+L+ N+ TA +G K + APE T
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEY----TARQGAKFPIKWTAPEAALYGRFT 190
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
K DV+SFG+LL E+ + + + N ++ D VE
Sbjct: 191 IKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQVERGYRMPCPP 235
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
+C E L + C +++P RPT + LE
Sbjct: 236 ECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 124/272 (45%), Gaps = 33/272 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+G FG V+ G T TT VA+K L E F E V+ + H+ LV+L
Sbjct: 194 GQGCFGEVWMG----TWNGTTRVAIKTLKPGNMSPEA-FLQEAQVMKKLRHEKLVQLYAV 248
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGLLYLHEDCSSQIIH 290
E + +V E+++ G+L FL G + L ++A QIA G+ Y+ +H
Sbjct: 249 VSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 304
Query: 291 CDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVAPEWYRKSTIT 347
D++ NIL+ ++ +++DFGL +L+ N+ TA +G K + APE T
Sbjct: 305 RDLRAANILVGENLVCKVADFGLGRLIEDNEY----TARQGAKFPIKWTAPEAALYGRFT 360
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
K DV+SFG+LL E+ + + + N ++ D VE
Sbjct: 361 IKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQVERGYRMPCPP 405
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
+C E L + C ++DP RPT + LE
Sbjct: 406 ECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 437
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 136/294 (46%), Gaps = 35/294 (11%)
Query: 159 KALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 217
K L+ + + G G FG V G ++ +VA+K L + + ++ +F E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 218 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAF 271
+GQ H N++RL G + + ++V E++ NG+L SFL F ++ LR
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG---- 155
Query: 272 QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRG 331
IA G+ YL + +H D+ +NIL++ + ++SDFGLA++L + T RG
Sbjct: 156 -IASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTT--RG 209
Query: 332 TK---GYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 388
K + +PE T+ DV+S+G++L E++S + EM + I
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI--------- 260
Query: 389 RNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
V+ + C L + + C Q+D + RP ++ +L+ ++
Sbjct: 261 ------KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 124/272 (45%), Gaps = 33/272 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+G FG V+ G T TT VA+K L E F E V+ + H+ LV+L
Sbjct: 17 GQGCFGEVWMG----TWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 71
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGLLYLHEDCSSQIIH 290
E + +V E+++ G+L FL G L ++A QIA G+ Y+ +H
Sbjct: 72 VSE-EPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 127
Query: 291 CDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVAPEWYRKSTIT 347
D++ NIL+ ++ +++DFGLA+L+ N+ TA +G K + APE T
Sbjct: 128 RDLRAANILVGENLVCKVADFGLARLIEDNEX----TARQGAKFPIKWTAPEAALYGRFT 183
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
K DV+SFG+LL E+ + + + N ++ D VE
Sbjct: 184 IKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQVERGYRMPCPP 228
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
+C E L + C +++P RPT + LE
Sbjct: 229 ECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 260
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 124/272 (45%), Gaps = 33/272 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+G FG V+ G T TT VA+K L E F E V+ + H+ LV+L
Sbjct: 24 GQGCFGEVWMG----TWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 78
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGLLYLHEDCSSQIIH 290
E + +V E++N G+L FL G L +++ QIA G+ Y+ +H
Sbjct: 79 VSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER---MNYVH 134
Query: 291 CDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVAPEWYRKSTIT 347
D++ NIL+ ++ +++DFGLA+L+ N+ TA +G K + APE T
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEW----TARQGAKFPIKWTAPEAALYGRFT 190
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
K DV+SFG+LL E+ + + + N ++ D VE
Sbjct: 191 IKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQVERGYRMPCPP 235
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
+C E L + C +++P RPT + LE
Sbjct: 236 ECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 125/266 (46%), Gaps = 22/266 (8%)
Query: 173 GRGSFGIVYKGV-IETTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLL 230
G G+FG VYKG+ + T VA+K L+ EF +E +++ H +LVRLL
Sbjct: 24 GSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLL 83
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFGNL-KPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
G C +L V + + +G L ++ + L N QIA+G++YL E +++
Sbjct: 84 GVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE---RRLV 139
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H D+ +N+L+ + +I+DFGLA+LL ++ + + ++A E T +
Sbjct: 140 HRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQ 199
Query: 350 VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKC 409
DV+S+GV + E+++ G+ Y D ++ DL+E C
Sbjct: 200 SDVWSYGVTIWELMTFG-------GKPY--------DGIPTREIPDLLEKGERLPQPPIC 244
Query: 410 VEKLLMVSIWCIQEDPSLRPTMRKVS 435
+ MV + C D RP ++++
Sbjct: 245 TIDVYMVMVKCWMIDADSRPKFKELA 270
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 124/272 (45%), Gaps = 33/272 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+G FG V+ G T TT VA+K L E F E V+ + H+ LV+L
Sbjct: 20 GQGCFGEVWMG----TWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 74
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGLLYLHEDCSSQIIH 290
E + +V E+++ G+L FL G L ++A QIA G+ Y+ +H
Sbjct: 75 VSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 130
Query: 291 CDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVAPEWYRKSTIT 347
D++ NIL+ ++ +++DFGLA+L+ N+ TA +G K + APE T
Sbjct: 131 RDLRAANILVGENLVCKVADFGLARLIEDNEY----TARQGAKFPIKWTAPEAALYGRFT 186
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
K DV+SFG+LL E+ + + + N ++ D VE
Sbjct: 187 IKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQVERGYRMPCPP 231
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
+C E L + C +++P RPT + LE
Sbjct: 232 ECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 263
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 103/200 (51%), Gaps = 12/200 (6%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 226
F +E G G FG+V+ G + VA+K + R E++F E V+ + H L
Sbjct: 13 TFVQEIGSGQFGLVHLGYW----LNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKL 67
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDC 284
V+L G C E LV+EF+ +G L+ +L L + L + + G+ YL E C
Sbjct: 68 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-LGMCLDVCEGMAYLEEAC 126
Query: 285 SSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKS 344
+IH D+ +N L+ ++ ++SDFG+ + + L+ T T + + +PE + S
Sbjct: 127 ---VIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVFSFS 182
Query: 345 TITAKVDVYSFGVLLLEIIS 364
++K DV+SFGVL+ E+ S
Sbjct: 183 RYSSKSDVWSFGVLMWEVFS 202
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 103/200 (51%), Gaps = 12/200 (6%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 226
F +E G G FG+V+ G + VA+K + R E++F E V+ + H L
Sbjct: 10 TFVQEIGSGQFGLVHLGYW----LNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKL 64
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDC 284
V+L G C E LV+EF+ +G L+ +L L + L + + G+ YL E C
Sbjct: 65 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-LGMCLDVCEGMAYLEEAC 123
Query: 285 SSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKS 344
+IH D+ +N L+ ++ ++SDFG+ + + L+ T T + + +PE + S
Sbjct: 124 ---VIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVFSFS 179
Query: 345 TITAKVDVYSFGVLLLEIIS 364
++K DV+SFGVL+ E+ S
Sbjct: 180 RYSSKSDVWSFGVLMWEVFS 199
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 124/272 (45%), Gaps = 33/272 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+G FG V+ G T TT VA+K L E F E V+ + H+ LV+L
Sbjct: 276 GQGCFGEVWMG----TWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 330
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGLLYLHEDCSSQIIH 290
E + +V E+++ G+L FL G L ++A QIA G+ Y+ +H
Sbjct: 331 VSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 386
Query: 291 CDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVAPEWYRKSTIT 347
D++ NIL+ ++ +++DFGLA+L+ N+ TA +G K + APE T
Sbjct: 387 RDLRAANILVGENLVCKVADFGLARLIEDNEY----TARQGAKFPIKWTAPEAALYGRFT 442
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
K DV+SFG+LL E+ + + + N ++ D VE
Sbjct: 443 IKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQVERGYRMPCPP 487
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
+C E L + C +++P RPT + LE
Sbjct: 488 ECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 519
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 103/200 (51%), Gaps = 12/200 (6%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 226
F +E G G FG+V+ G + VA+K + R E++F E V+ + H L
Sbjct: 8 TFVQEIGSGQFGLVHLGYW----LNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKL 62
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDC 284
V+L G C E LV+EF+ +G L+ +L L + L + + G+ YL E C
Sbjct: 63 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-LGMCLDVCEGMAYLEEAC 121
Query: 285 SSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKS 344
+IH D+ +N L+ ++ ++SDFG+ + + L+ T T + + +PE + S
Sbjct: 122 ---VIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVFSFS 177
Query: 345 TITAKVDVYSFGVLLLEIIS 364
++K DV+SFGVL+ E+ S
Sbjct: 178 RYSSKSDVWSFGVLMWEVFS 197
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 125/266 (46%), Gaps = 22/266 (8%)
Query: 173 GRGSFGIVYKGV-IETTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLL 230
G G+FG VYKG+ + T VA+K L+ EF +E +++ H +LVRLL
Sbjct: 47 GSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLL 106
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFGNL-KPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
G C +L V + + +G L ++ + L N QIA+G++YL E +++
Sbjct: 107 GVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE---RRLV 162
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H D+ +N+L+ + +I+DFGLA+LL ++ + + ++A E T +
Sbjct: 163 HRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQ 222
Query: 350 VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKC 409
DV+S+GV + E+++ G+ Y D ++ DL+E C
Sbjct: 223 SDVWSYGVTIWELMTFG-------GKPY--------DGIPTREIPDLLEKGERLPQPPIC 267
Query: 410 VEKLLMVSIWCIQEDPSLRPTMRKVS 435
+ MV + C D RP ++++
Sbjct: 268 TIDVYMVMVKCWMIDADSRPKFKELA 293
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 134/302 (44%), Gaps = 41/302 (13%)
Query: 167 NFKEEAGRGSFGIVYK----GVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH 222
N + GRG+FG V + G+ +T T AV + K + ++I H
Sbjct: 31 NLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 90
Query: 223 HKNLVRLLGFCDE-GQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNI------ 269
H N+V LLG C + G +++ EF G L+++L F K +L +
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 270 ---AFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIK 326
+FQ+A+G+ +L S + IH D+ +NILL + +I DFGLA+ + + K
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 327 TAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWA 384
R ++APE T + DV+SFGVLL EI S S +++ EE+
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF------- 260
Query: 385 FDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEV 444
C R L EG D E + + C +PS RPT ++ + L +++
Sbjct: 261 --CRR------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311
Query: 445 DV 446
+
Sbjct: 312 NA 313
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 132/303 (43%), Gaps = 45/303 (14%)
Query: 167 NFKEEAGRGSFGIVYKGVIETT------RTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIG 219
F + G G+FG V+E T + VAVK L EKE +E+ ++
Sbjct: 49 QFGKTLGAGAFG----KVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 104
Query: 220 QT-HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP----SWNLRTN------ 268
H+N+V LLG C G L++ E+ G L +FL P S+N N
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLS 164
Query: 269 ------IAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQS 322
+ Q+A+G+ +L S IH D+ +N+LL + + A+I DFGLA+ + + +
Sbjct: 165 SRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 221
Query: 323 KTIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTD 382
+K R ++APE T + DV+S+G+LL EI F + + IL
Sbjct: 222 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI------FSLGLNPYPGILV- 274
Query: 383 WAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
N K LV+ + + + + C +P+ RPT +++ L+
Sbjct: 275 -------NSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 327
Query: 443 EVD 445
+ D
Sbjct: 328 QED 330
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 136/294 (46%), Gaps = 35/294 (11%)
Query: 159 KALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 217
K L+ + + G G FG V G ++ +VA+K L + + ++ +F E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 218 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAF 271
+GQ H N++RL G + + ++V E++ NG+L SFL F ++ LR
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG---- 155
Query: 272 QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRG 331
IA G+ YL + +H D+ +NIL++ + ++SDFGL+++L + T RG
Sbjct: 156 -IASGMKYLSD---MGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--RG 209
Query: 332 TK---GYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 388
K + +PE T+ DV+S+G++L E++S + EM + I
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI--------- 260
Query: 389 RNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
V+ + C L + + C Q+D + RP ++ +L+ ++
Sbjct: 261 ------KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 122/299 (40%), Gaps = 39/299 (13%)
Query: 168 FKEEAGRGSFGIVYKGVIET--TRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN 225
K E G G+FG V+ VAVK L + ++F+ E ++ H++
Sbjct: 45 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 104
Query: 226 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN----------------I 269
+VR G C EG+ L+V+E++ +G L FL + P L +
Sbjct: 105 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSH-GPDAKLLAGGEDVAPGPLGLGQLLAV 163
Query: 270 AFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAI 329
A Q+A G++YL +H D+ +N L+ +I DFG+++ + +
Sbjct: 164 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 220
Query: 330 RGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR 389
++ PE T + DV+SFGV+L EI + K Y + A DC
Sbjct: 221 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ------PWYQLSNTEAIDCIT 274
Query: 390 NGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEVDVPP 448
G+ E C ++ + C Q +P R +++ V L+ + + PP
Sbjct: 275 QGR---------ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ--APP 322
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 122/299 (40%), Gaps = 39/299 (13%)
Query: 168 FKEEAGRGSFGIVYKGVIET--TRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN 225
K E G G+FG V+ VAVK L + ++F+ E ++ H++
Sbjct: 22 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 81
Query: 226 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN----------------I 269
+VR G C EG+ L+V+E++ +G L FL + P L +
Sbjct: 82 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSH-GPDAKLLAGGEDVAPGPLGLGQLLAV 140
Query: 270 AFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAI 329
A Q+A G++YL +H D+ +N L+ +I DFG+++ + +
Sbjct: 141 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 197
Query: 330 RGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR 389
++ PE T + DV+SFGV+L EI + K Y + A DC
Sbjct: 198 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ------PWYQLSNTEAIDCIT 251
Query: 390 NGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEVDVPP 448
G+ E C ++ + C Q +P R +++ V L+ + + PP
Sbjct: 252 QGR---------ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ--APP 299
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 124/272 (45%), Gaps = 33/272 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+G FG V+ G T TT VA+K L E F E V+ + H+ LV+L
Sbjct: 193 GQGCFGEVWMG----TWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 247
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGLLYLHEDCSSQIIH 290
E + +V E+++ G+L FL G L ++A QIA G+ Y+ +H
Sbjct: 248 VSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 303
Query: 291 CDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVAPEWYRKSTIT 347
D++ NIL+ ++ +++DFGLA+L+ N+ TA +G K + APE T
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEY----TARQGAKFPIKWTAPEAALYGRFT 359
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
K DV+SFG+LL E+ + + + N ++ D VE
Sbjct: 360 IKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQVERGYRMPCPP 404
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
+C E L + C +++P RPT + LE
Sbjct: 405 ECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 122/299 (40%), Gaps = 39/299 (13%)
Query: 168 FKEEAGRGSFGIVYKGVIET--TRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN 225
K E G G+FG V+ VAVK L + ++F+ E ++ H++
Sbjct: 16 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 75
Query: 226 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN----------------I 269
+VR G C EG+ L+V+E++ +G L FL + P L +
Sbjct: 76 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSH-GPDAKLLAGGEDVAPGPLGLGQLLAV 134
Query: 270 AFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAI 329
A Q+A G++YL +H D+ +N L+ +I DFG+++ + +
Sbjct: 135 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 191
Query: 330 RGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR 389
++ PE T + DV+SFGV+L EI + K Y + A DC
Sbjct: 192 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ------PWYQLSNTEAIDCIT 245
Query: 390 NGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEVDVPP 448
G+ E C ++ + C Q +P R +++ V L+ + + PP
Sbjct: 246 QGR---------ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ--APP 293
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 124/272 (45%), Gaps = 33/272 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+G FG V+ G T TT VA+K L E F E V+ + H+ LV+L
Sbjct: 193 GQGCFGEVWMG----TWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 247
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGLLYLHEDCSSQIIH 290
E + +V E+++ G+L FL G L ++A QIA G+ Y+ +H
Sbjct: 248 VSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 303
Query: 291 CDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVAPEWYRKSTIT 347
D++ NIL+ ++ +++DFGLA+L+ N+ TA +G K + APE T
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEY----TARQGAKFPIKWTAPEAALYGRFT 359
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
K DV+SFG+LL E+ + + + N ++ D VE
Sbjct: 360 IKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQVERGYRMPCPP 404
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
+C E L + C +++P RPT + LE
Sbjct: 405 ECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 136/295 (46%), Gaps = 35/295 (11%)
Query: 159 KALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 217
K L+ + + G G FG V G ++ +VA+K L + + ++ +F E +
Sbjct: 28 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 87
Query: 218 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAF 271
+GQ H N++RL G + + ++V E++ NG+L SFL F ++ LR
Sbjct: 88 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG---- 143
Query: 272 QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRG 331
IA G+ YL + +H D+ +NIL++ + ++SDFGL+++L + T RG
Sbjct: 144 -IASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--RG 197
Query: 332 TK---GYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 388
K + +PE T+ DV+S+G++L E++S + EM + I
Sbjct: 198 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI--------- 248
Query: 389 RNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVE 443
V+ + C L + + C Q+D + RP ++ +L+ ++
Sbjct: 249 ------KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 297
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 131/295 (44%), Gaps = 40/295 (13%)
Query: 173 GRGSFGIVYK----GVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVR 228
GRG+FG V + G+ +T T AV + K + ++I HH N+V
Sbjct: 38 GRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 97
Query: 229 LLGFCDE-GQNRLLVYEFLNNGTLASFL------FGNLKP--------SWNLRTNIAFQI 273
LLG C + G +++ EF G L+++L F KP + +FQ+
Sbjct: 98 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQV 157
Query: 274 ARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK 333
A+G+ +L S + IH D+ +NILL + +I DFGLA+ + + K R
Sbjct: 158 AKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 334 GYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYRNG 391
++APE T + DV+SFGVLL EI S S +++ EE+ C R
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------CRR-- 263
Query: 392 KLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEVDV 446
L EG D E + + C +PS RPT ++ + L +++ +
Sbjct: 264 ----LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 133/299 (44%), Gaps = 38/299 (12%)
Query: 167 NFKEEAGRGSFGIVYK----GVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH 222
N + GRG+FG V + G+ +T T AV + K + ++I H
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 223 HKNLVRLLGFCDE-GQNRLLVYEFLNNGTLASFLFGN---LKPSWNLRTNI--------- 269
H N+V LLG C + G +++ EF G L+++L P +L +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 270 AFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAI 329
+FQ+A+G+ +L S + IH D+ +NILL + +I DFGLA+ + + K
Sbjct: 150 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 206
Query: 330 RGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDC 387
R ++APE T + DV+SFGVLL EI S S +++ EE+ C
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------C 257
Query: 388 YRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEVDV 446
R L EG D E + + C +PS RPT ++ + L +++ +
Sbjct: 258 RR------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 309
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 131/301 (43%), Gaps = 43/301 (14%)
Query: 167 NFKEEAGRGSFGIVYKGVIETT------RTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIG 219
F + G G+FG V+E T + VAVK L EKE +E+ ++
Sbjct: 49 QFGKTLGAGAFG----KVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 104
Query: 220 QT-HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIA---- 274
H+N+V LLG C G L++ E+ G L +FL + S L T+ AF IA
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL---RRKSRVLETDPAFAIANSTA 161
Query: 275 --RGLLYLHED--------CSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKT 324
R LL+ S IH D+ +N+LL + + A+I DFGLA+ + + +
Sbjct: 162 STRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 221
Query: 325 IKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA 384
+K R ++APE T + DV+S+G+LL EI F + + IL
Sbjct: 222 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI------FSLGLNPYPGILV--- 272
Query: 385 FDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEV 444
N K LV+ + + + + C +P+ RPT +++ L+ +
Sbjct: 273 -----NSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327
Query: 445 D 445
D
Sbjct: 328 D 328
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 136/294 (46%), Gaps = 35/294 (11%)
Query: 159 KALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 217
K L+ + + G G FG V G ++ +VA+K L + + ++ +F E +
Sbjct: 38 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 97
Query: 218 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAF 271
+GQ H N++RL G + + ++V E++ NG+L SFL F ++ LR
Sbjct: 98 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG---- 153
Query: 272 QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRG 331
IA G+ YL + +H D+ +NIL++ + ++SDFGL+++L + T RG
Sbjct: 154 -IASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--RG 207
Query: 332 TK---GYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 388
K + +PE T+ DV+S+G++L E++S + EM + I
Sbjct: 208 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI--------- 258
Query: 389 RNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
V+ + C L + + C Q+D + RP ++ +L+ ++
Sbjct: 259 ------KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 306
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 136/294 (46%), Gaps = 35/294 (11%)
Query: 159 KALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 217
K L+ + + G G FG V G ++ +VA+K L + + ++ +F E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 218 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAF 271
+GQ H N++RL G + + ++V E++ NG+L SFL F ++ LR
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG---- 155
Query: 272 QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRG 331
IA G+ YL + +H D+ +NIL++ + ++SDFGL+++L + T RG
Sbjct: 156 -IASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--RG 209
Query: 332 TK---GYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 388
K + +PE T+ DV+S+G++L E++S + EM + I
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI--------- 260
Query: 389 RNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
V+ + C L + + C Q+D + RP ++ +L+ ++
Sbjct: 261 ------KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 136/294 (46%), Gaps = 35/294 (11%)
Query: 159 KALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 217
K L+ + + G G FG V G ++ +VA+K L + + ++ +F E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 218 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAF 271
+GQ H N++RL G + + ++V E++ NG+L SFL F ++ LR
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG---- 155
Query: 272 QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRG 331
IA G+ YL + +H D+ +NIL++ + ++SDFGL+++L + T RG
Sbjct: 156 -IASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--RG 209
Query: 332 TK---GYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 388
K + +PE T+ DV+S+G++L E++S + EM + I
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI--------- 260
Query: 389 RNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
V+ + C L + + C Q+D + RP ++ +L+ ++
Sbjct: 261 ------KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 136/294 (46%), Gaps = 35/294 (11%)
Query: 159 KALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 217
K L+ + + G G FG V G ++ +VA+K L + + ++ +F E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 218 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAF 271
+GQ H N++RL G + + ++V E++ NG+L SFL F ++ LR
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG---- 155
Query: 272 QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRG 331
IA G+ YL + +H D+ +NIL++ + ++SDFGL+++L + T RG
Sbjct: 156 -IASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--RG 209
Query: 332 TK---GYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 388
K + +PE T+ DV+S+G++L E++S + EM + I
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI--------- 260
Query: 389 RNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
V+ + C L + + C Q+D + RP ++ +L+ ++
Sbjct: 261 ------KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 136/294 (46%), Gaps = 35/294 (11%)
Query: 159 KALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 217
K L+ + + G G FG V G ++ +VA+K L + + ++ +F E +
Sbjct: 11 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 70
Query: 218 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAF 271
+GQ H N++RL G + + ++V E++ NG+L SFL F ++ LR
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG---- 126
Query: 272 QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRG 331
IA G+ YL + +H D+ +NIL++ + ++SDFGL+++L + T RG
Sbjct: 127 -IASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--RG 180
Query: 332 TK---GYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 388
K + +PE T+ DV+S+G++L E++S + EM + I
Sbjct: 181 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI--------- 231
Query: 389 RNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
V+ + C L + + C Q+D + RP ++ +L+ ++
Sbjct: 232 ------KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 279
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 131/301 (43%), Gaps = 43/301 (14%)
Query: 167 NFKEEAGRGSFGIVYKGVIETT------RTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIG 219
F + G G+FG V+E T + VAVK L EKE +E+ ++
Sbjct: 49 QFGKTLGAGAFG----KVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 104
Query: 220 QT-HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIA---- 274
H+N+V LLG C G L++ E+ G L +FL + S L T+ AF IA
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL---RRKSRVLETDPAFAIANSTL 161
Query: 275 --RGLLYLHED--------CSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKT 324
R LL+ S IH D+ +N+LL + + A+I DFGLA+ + + +
Sbjct: 162 STRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 221
Query: 325 IKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA 384
+K R ++APE T + DV+S+G+LL EI F + + IL
Sbjct: 222 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI------FSLGLNPYPGILV--- 272
Query: 385 FDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEV 444
N K LV+ + + + + C +P+ RPT +++ L+ +
Sbjct: 273 -----NSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327
Query: 445 D 445
D
Sbjct: 328 D 328
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 124/272 (45%), Gaps = 33/272 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+G FG V+ G T TT VA+K L E F E V+ + H+ LV+L
Sbjct: 193 GQGCFGEVWMG----TWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 247
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGLLYLHEDCSSQIIH 290
E + +V E+++ G+L FL G L ++A QIA G+ Y+ +H
Sbjct: 248 VSE-EPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 303
Query: 291 CDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVAPEWYRKSTIT 347
D++ NIL+ ++ +++DFGLA+L+ N+ TA +G K + APE T
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEY----TARQGAKFPIKWTAPEAALYGRFT 359
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
K DV+SFG+LL E+ + + + N ++ D VE
Sbjct: 360 IKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQVERGYRMPCPP 404
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
+C E L + C +++P RPT + LE
Sbjct: 405 ECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 136/294 (46%), Gaps = 35/294 (11%)
Query: 159 KALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 217
K L+ + + G G FG V G ++ +VA+K L + + ++ +F E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 218 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAF 271
+GQ H N++RL G + + ++V E++ NG+L SFL F ++ LR
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG---- 155
Query: 272 QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRG 331
IA G+ YL + +H D+ +NIL++ + ++SDFGL+++L + T RG
Sbjct: 156 -IASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--RG 209
Query: 332 TK---GYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 388
K + +PE T+ DV+S+G++L E++S + EM + I
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI--------- 260
Query: 389 RNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
V+ + C L + + C Q+D + RP ++ +L+ ++
Sbjct: 261 ------KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 135/294 (45%), Gaps = 35/294 (11%)
Query: 159 KALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 217
K L+ + + G G FG V G ++ +VA+K L + + ++ +F E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 218 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAF 271
+GQ H N++RL G + + ++V E++ NG+L SFL F ++ LR
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG---- 155
Query: 272 QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRG 331
IA G+ YL + +H D+ +NIL++ + ++SDFGL ++L + T RG
Sbjct: 156 -IASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTT--RG 209
Query: 332 TK---GYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 388
K + +PE T+ DV+S+G++L E++S + EM + I
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI--------- 260
Query: 389 RNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
V+ + C L + + C Q+D + RP ++ +L+ ++
Sbjct: 261 ------KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 110/229 (48%), Gaps = 33/229 (14%)
Query: 158 YKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVV 217
Y L+ F++ G G+FG V K I+ A + + +D ++F E+ V
Sbjct: 19 YPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 78
Query: 218 IGQT-HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIA-- 274
+ + HH N++ LLG C+ L E+ +G L FL + S L T+ AF IA
Sbjct: 79 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL----RKSRVLETDPAFAIANS 134
Query: 275 ------------------RGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKL 316
RG+ YL + Q IH D+ +NIL+ ++Y A+I+DFGL++
Sbjct: 135 TASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRG 191
Query: 317 LTLNQSKTI-KTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIIS 364
+ KT+ + +R ++A E S T DV+S+GVLL EI+S
Sbjct: 192 QEVYVKKTMGRLPVR----WMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 132/297 (44%), Gaps = 39/297 (13%)
Query: 167 NFKEEAGRGSFGIVYKGVIETT------RTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIG 219
F + G G+FG V+E T + VAVK L EKE +E+ ++
Sbjct: 41 QFGKTLGAGAFG----KVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 96
Query: 220 QT-HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWN--------LRTNIA 270
H+N+V LLG C G L++ E+ G L +FL + + LR +
Sbjct: 97 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLH 156
Query: 271 F--QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTA 328
F Q+A+G+ +L S IH D+ +N+LL + + A+I DFGLA+ + + + +K
Sbjct: 157 FSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 213
Query: 329 IRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 388
R ++APE T + DV+S+G+LL EI F + + IL
Sbjct: 214 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI------FSLGLNPYPGILV------- 260
Query: 389 RNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEVD 445
N K LV+ + + + + C +P+ RPT +++ L+ + D
Sbjct: 261 -NSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 316
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 110/229 (48%), Gaps = 33/229 (14%)
Query: 158 YKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVV 217
Y L+ F++ G G+FG V K I+ A + + +D ++F E+ V
Sbjct: 9 YPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 68
Query: 218 IGQT-HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIA-- 274
+ + HH N++ LLG C+ L E+ +G L FL + S L T+ AF IA
Sbjct: 69 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL----RKSRVLETDPAFAIANS 124
Query: 275 ------------------RGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKL 316
RG+ YL + Q IH D+ +NIL+ ++Y A+I+DFGL++
Sbjct: 125 TASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRG 181
Query: 317 LTLNQSKTI-KTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIIS 364
+ KT+ + +R ++A E S T DV+S+GVLL EI+S
Sbjct: 182 QEVYVKKTMGRLPVR----WMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 104/198 (52%), Gaps = 10/198 (5%)
Query: 171 EAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKNLVRL 229
E G G+FG V +GV R VA+K L + + + +E E ++ Q + +VRL
Sbjct: 17 ELGCGNFGSVRQGVYRM-RKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRL 75
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLK--PSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+G C + + +LV E G L FL G + P N+ + Q++ G+ YL E
Sbjct: 76 IGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNV-AELLHQVSMGMKYLEE---KN 130
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQS-KTIKTAIRGTKGYVAPEWYRKSTI 346
+H D+ +N+LL + + A+ISDFGL+K L + S T ++A + + APE
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 190
Query: 347 TAKVDVYSFGVLLLEIIS 364
+++ DV+S+GV + E +S
Sbjct: 191 SSRSDVWSYGVTMWEALS 208
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 128/282 (45%), Gaps = 30/282 (10%)
Query: 163 EATD-NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT 221
E TD K + G G +G VY GV + + VAVK L + E EF E V+ +
Sbjct: 30 ERTDITMKHKLGGGQYGEVYVGVW---KKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEI 85
Query: 222 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGLLY 279
H NLV+LLG C +V E++ G L +L + + + +A QI+ + Y
Sbjct: 86 KHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEY 145
Query: 280 LHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPE 339
L + IH D+ +N L+ +++ +++DFGL++L+T + T + + APE
Sbjct: 146 LEK---KNFIHRDLAARNCLVGENHVVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 201
Query: 340 WYRKSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYRNGKLDDLV 397
+T + K DV++FGVLL EI + S I++ + Y DL+
Sbjct: 202 SLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-----------------DLL 244
Query: 398 EGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
E C K+ + C + P+ RP+ + Q E
Sbjct: 245 EKGYRMEQPEGCPPKVYELMRACWKWSPADRPSFAETHQAFE 286
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 132/297 (44%), Gaps = 39/297 (13%)
Query: 167 NFKEEAGRGSFGIVYKGVIETT------RTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIG 219
F + G G+FG V+E T + VAVK L EKE +E+ ++
Sbjct: 49 QFGKTLGAGAFG----KVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 104
Query: 220 QT-HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWN--------LRTNIA 270
H+N+V LLG C G L++ E+ G L +FL + + LR +
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLH 164
Query: 271 F--QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTA 328
F Q+A+G+ +L S IH D+ +N+LL + + A+I DFGLA+ + + + +K
Sbjct: 165 FSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 221
Query: 329 IRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 388
R ++APE T + DV+S+G+LL EI F + + IL
Sbjct: 222 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI------FSLGLNPYPGILV------- 268
Query: 389 RNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEVD 445
N K LV+ + + + + C +P+ RPT +++ L+ + D
Sbjct: 269 -NSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 324
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 102/200 (51%), Gaps = 12/200 (6%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 226
F +E G G FG+V+ G + VA+K + R E++F E V+ + H L
Sbjct: 11 TFVQEIGSGQFGLVHLGYW----LNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKL 65
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDC 284
V+L G C E LV EF+ +G L+ +L L + L + + G+ YL E C
Sbjct: 66 VQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETL-LGMCLDVCEGMAYLEEAC 124
Query: 285 SSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKS 344
+IH D+ +N L+ ++ ++SDFG+ + + L+ T T + + +PE + S
Sbjct: 125 ---VIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVFSFS 180
Query: 345 TITAKVDVYSFGVLLLEIIS 364
++K DV+SFGVL+ E+ S
Sbjct: 181 RYSSKSDVWSFGVLMWEVFS 200
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 128/276 (46%), Gaps = 23/276 (8%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLVRLLG 231
G G FG V G ++ VA+K L + + ++ +F +E ++GQ H N++ L G
Sbjct: 16 GAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEG 75
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIARGLLYLHEDCSSQIIH 290
+ +++ EF+ NG+L SFL N ++ + IA G+ YL + +H
Sbjct: 76 VVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLAD---MNYVH 132
Query: 291 CDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVAPEWYRKSTIT 347
+ +NIL++ + ++SDFGL++ L + S T+ G K + APE + T
Sbjct: 133 RALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFT 192
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
+ DV+S+G+++ E++S Y W N + + +E D +
Sbjct: 193 SASDVWSYGIVMWEVMS------------YGERPYWDMT---NQDVINAIEQDYRLPPPM 237
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVE 443
C L + + C Q+D + RP ++ L+ ++
Sbjct: 238 DCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR 273
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 133/292 (45%), Gaps = 42/292 (14%)
Query: 156 FSYKALEEATDN---FKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE---- 208
F L DN ++++ G+G FG+V+KG + ++ VA+K L +GE
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKS---VVAIKSLILGDSEGETEMI 64
Query: 209 ---KEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP-SWN 264
+EF+ EV ++ +H N+V+L G +V EF+ G L L P W+
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWS 122
Query: 265 LRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNIL---LDDHYN--ARISDFGLAKLLTL 319
++ + IA G+ Y+ ++ + I+H D++ NI LD++ A+++DFGL++
Sbjct: 123 VKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ---- 177
Query: 320 NQSKTIKTAIRGTKGYVAPEWY--RKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY 377
QS + + G ++APE + + T K D YSF ++L I++ FD EY
Sbjct: 178 -QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD-----EY 231
Query: 378 AILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRP 429
+ + R L + D C +L V C DP RP
Sbjct: 232 SYGKIKFINMIREEGLRPTIPED--------CPPRLRNVIELCWSGDPKKRP 275
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 136/294 (46%), Gaps = 35/294 (11%)
Query: 159 KALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 217
K L+ + + G G FG V G ++ +VA+K L + + ++ +F E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 218 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAF 271
+GQ H N++RL G + + ++V E + NG+L SFL F ++ LR
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRG---- 155
Query: 272 QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRG 331
IA G+ YL + + +H D+ +NIL++ + ++SDFGL+++L + T RG
Sbjct: 156 -IASGMKYLSDMGA---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--RG 209
Query: 332 TK---GYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 388
K + +PE T+ DV+S+G++L E++S + EM + I
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI--------- 260
Query: 389 RNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
V+ + C L + + C Q+D + RP ++ +L+ ++
Sbjct: 261 ------KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 102/200 (51%), Gaps = 12/200 (6%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 226
F +E G G FG+V+ G + VA+K + + E +F E V+ + H L
Sbjct: 30 TFVQEIGSGQFGLVHLGYW----LNKDKVAIKTI-KEGSMSEDDFIEEAEVMMKLSHPKL 84
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDC 284
V+L G C E LV+EF+ +G L+ +L L + L + + G+ YL E C
Sbjct: 85 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-LGMCLDVCEGMAYLEEAC 143
Query: 285 SSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKS 344
+IH D+ +N L+ ++ ++SDFG+ + + L+ T T + + +PE + S
Sbjct: 144 ---VIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVFSFS 199
Query: 345 TITAKVDVYSFGVLLLEIIS 364
++K DV+SFGVL+ E+ S
Sbjct: 200 RYSSKSDVWSFGVLMWEVFS 219
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 7/188 (3%)
Query: 195 VAVKKL---DRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL 251
VA+K + R ++ K F+ EV Q H+N+V ++ +E LV E++ TL
Sbjct: 39 VAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTL 98
Query: 252 ASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDF 311
+ ++ + S + N QI G+ + H+ +I+H DIKPQNIL+D + +I DF
Sbjct: 99 SEYIESHGPLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDF 155
Query: 312 GLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDI 371
G+AK L+ S T + GT Y +PE + D+YS G++L E++ F+
Sbjct: 156 GIAKALS-ETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNG 214
Query: 372 EMGEEYAI 379
E AI
Sbjct: 215 ETAVSIAI 222
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 125/291 (42%), Gaps = 33/291 (11%)
Query: 168 FKEEAGRGSFGIVYKGVIET--TRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN 225
K E G G+FG V+ VAVK L + K+F E ++ H++
Sbjct: 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEH 76
Query: 226 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN-----LKPSWNLRT--------NIAFQ 272
+V+ G C EG ++V+E++ +G L FL + L N T +IA Q
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 273 IARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGT 332
IA G++YL S +H D+ +N L+ ++ +I DFG+++ + +
Sbjct: 137 IAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 193
Query: 333 KGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGK 392
++ PE T + DV+S GV+L EI + K Y + + +C G+
Sbjct: 194 IRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQ------PWYQLSNNEVIECITQGR 247
Query: 393 LDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVE 443
+ C +++ + + C Q +P +R ++ + +L+ + +
Sbjct: 248 V---------LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 135/294 (45%), Gaps = 35/294 (11%)
Query: 159 KALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 217
K L+ + + G G FG V G ++ +VA+K L + + ++ +F E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 218 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAF 271
+GQ H N++RL G + + ++V E + NG+L SFL F ++ LR
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRG---- 155
Query: 272 QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRG 331
IA G+ YL + +H D+ +NIL++ + ++SDFGL+++L + T RG
Sbjct: 156 -IASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--RG 209
Query: 332 TK---GYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 388
K + +PE T+ DV+S+G++L E++S + EM + I
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI--------- 260
Query: 389 RNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
V+ + C L + + C Q+D + RP ++ +L+ ++
Sbjct: 261 ------KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 119/281 (42%), Gaps = 37/281 (13%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVR 228
E+ GRG+FG V+ G + R T VAVK D + +F E ++ Q H N+VR
Sbjct: 120 EQIGRGNFGEVFSGRL---RADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVR 176
Query: 229 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQI----ARGLLYLHEDC 284
L+G C + Q +V E + G +FL LR Q+ A G+ YL C
Sbjct: 177 LIGVCTQKQPIYIVMELVQGGDFLTFLRTE---GARLRVKTLLQMVGDAAAGMEYLESKC 233
Query: 285 SSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK----GYVAPEW 340
IH D+ +N L+ + +ISDFG+++ ++ + A G + + APE
Sbjct: 234 C---IHRDLAARNCLVTEKNVLKISDFGMSR----EEADGVXAASGGLRQVPVKWTAPEA 286
Query: 341 YRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGD 400
+++ DV+SFG+LL E S S + N + + VE
Sbjct: 287 LNYGRYSSESDVWSFGILLWETFSLGAS---------------PYPNLSNQQTREFVEKG 331
Query: 401 MEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGV 441
C + + + C +P RP+ + Q L+ +
Sbjct: 332 GRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 135/294 (45%), Gaps = 35/294 (11%)
Query: 159 KALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 217
K L+ + + G G FG V G ++ +VA+K L + + ++ +F E +
Sbjct: 11 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 70
Query: 218 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAF 271
+GQ H N++RL G + + ++V E + NG+L SFL F ++ LR
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRG---- 126
Query: 272 QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRG 331
IA G+ YL + +H D+ +NIL++ + ++SDFGL+++L + T RG
Sbjct: 127 -IASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--RG 180
Query: 332 TK---GYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 388
K + +PE T+ DV+S+G++L E++S + EM + I
Sbjct: 181 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI--------- 231
Query: 389 RNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
V+ + C L + + C Q+D + RP ++ +L+ ++
Sbjct: 232 ------KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 279
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 103/200 (51%), Gaps = 12/200 (6%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 226
F +E G G FG+V+ G + VA+K + R E++F E V+ + H L
Sbjct: 10 TFVQEIGSGQFGLVHLGYW----LNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKL 64
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDC 284
V+L G C E LV+EF+ +G L+ +L L + L + + G+ YL E
Sbjct: 65 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-LGMCLDVCEGMAYLEE-- 121
Query: 285 SSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKS 344
+ +IH D+ +N L+ ++ ++SDFG+ + + L+ T T + + +PE + S
Sbjct: 122 -ASVIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVFSFS 179
Query: 345 TITAKVDVYSFGVLLLEIIS 364
++K DV+SFGVL+ E+ S
Sbjct: 180 RYSSKSDVWSFGVLMWEVFS 199
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 130/302 (43%), Gaps = 44/302 (14%)
Query: 167 NFKEEAGRGSFGIVYK----GVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH 222
N + GRG+FG V + G+ +T T AV + K + ++I H
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 223 HKNLVRLLGFCDE-GQNRLLVYEFLNNGTLASFLFGN---LKPSWNLRTNI--------- 269
H N+V LLG C + G +++ EF G L+++L P +L +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 270 AFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAI 329
+FQ+A+G+ +L S + IH D+ +NILL + +I DFGLA+ + + K
Sbjct: 150 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDA 206
Query: 330 RGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR 389
R ++APE T + DV+SFGVLL EI S S Y
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS------------------PYP 248
Query: 390 NGKLDD-----LVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEV 444
K+D+ L EG D E + + C +PS RPT ++ + L +++
Sbjct: 249 GVKIDEEFXRRLKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 307
Query: 445 DV 446
+
Sbjct: 308 NA 309
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 108/209 (51%), Gaps = 8/209 (3%)
Query: 161 LEEATDNFKEEAGRGSFGIVYKGVIETTRTST-TAVAVKKLDRVFQDGEKEFKNEVVVIG 219
EE F ++ G+G+FG V + + +T VAVKKL ++ ++F+ E+ ++
Sbjct: 10 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 69
Query: 220 QTHHKNLVRLLGFCDEG--QNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIARG 276
H N+V+ G C +N L+ E+L G+L +L + + +++ QI +G
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKG 129
Query: 277 LLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLN-QSKTIKTAIRGTKGY 335
+ YL + + IH D+ +NIL+++ +I DFGL K+L + + +K +
Sbjct: 130 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 186
Query: 336 VAPEWYRKSTITAKVDVYSFGVLLLEIIS 364
APE +S + DV+SFGV+L E+ +
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 119/281 (42%), Gaps = 37/281 (13%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVR 228
E+ GRG+FG V+ G + R T VAVK D + +F E ++ Q H N+VR
Sbjct: 120 EQIGRGNFGEVFSGRL---RADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVR 176
Query: 229 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQI----ARGLLYLHEDC 284
L+G C + Q +V E + G +FL LR Q+ A G+ YL C
Sbjct: 177 LIGVCTQKQPIYIVMELVQGGDFLTFLRTE---GARLRVKTLLQMVGDAAAGMEYLESKC 233
Query: 285 SSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK----GYVAPEW 340
IH D+ +N L+ + +ISDFG+++ ++ + A G + + APE
Sbjct: 234 C---IHRDLAARNCLVTEKNVLKISDFGMSR----EEADGVYAASGGLRQVPVKWTAPEA 286
Query: 341 YRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGD 400
+++ DV+SFG+LL E S S + N + + VE
Sbjct: 287 LNYGRYSSESDVWSFGILLWETFSLGAS---------------PYPNLSNQQTREFVEKG 331
Query: 401 MEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGV 441
C + + + C +P RP+ + Q L+ +
Sbjct: 332 GRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 144/326 (44%), Gaps = 54/326 (16%)
Query: 152 NLRCFSYKALEEATDNFKEE-------AGRGSFGIVYKGVI--ETTRTSTTAVAVKKLDR 202
+L ++K LE+ F + G G FG V K R T VAVK L
Sbjct: 4 SLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE 63
Query: 203 VFQDGE-KEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK- 260
E ++ +E V+ Q +H ++++L G C + LL+ E+ G+L FL + K
Sbjct: 64 NASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKV 123
Query: 261 ------------------PSWNLRT-----NIAFQIARGLLYLHEDCSSQIIHCDIKPQN 297
P T + A+QI++G+ YL E +++H D+ +N
Sbjct: 124 GPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARN 180
Query: 298 ILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGV 357
IL+ + +ISDFGL++ + S ++ R ++A E T + DV+SFGV
Sbjct: 181 ILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGV 240
Query: 358 LLLEIISCRKSFDIEMGEEY-AILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMV 416
LL EI++ G Y I + F+ + G ME ++ C E++ +
Sbjct: 241 LLWEIVTLG-------GNPYPGIPPERLFNLLKTGH-------RMERPDN--CSEEMYRL 284
Query: 417 SIWCIQEDPSLRPTMRKVSQMLEGVV 442
+ C +++P RP +S+ LE ++
Sbjct: 285 MLQCWKQEPDKRPVFADISKDLEKMM 310
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 118/247 (47%), Gaps = 42/247 (17%)
Query: 140 IRNSPGDGTVETNLRCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKK 199
++N+P D T+ Y L+ F++ G G+FG V K I+ A +
Sbjct: 7 VKNNP-DPTI--------YPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRM 57
Query: 200 LDRVFQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN 258
+ +D ++F E+ V+ + HH N++ LLG C+ L E+ +G L FL
Sbjct: 58 KEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL--- 114
Query: 259 LKPSWNLRTNIAFQIA--------------------RGLLYLHEDCSSQIIHCDIKPQNI 298
+ S L T+ AF IA RG+ YL + Q IH ++ +NI
Sbjct: 115 -RKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRNLAARNI 170
Query: 299 LLDDHYNARISDFGLAKLLTLNQSKTI-KTAIRGTKGYVAPEWYRKSTITAKVDVYSFGV 357
L+ ++Y A+I+DFGL++ + KT+ + +R ++A E S T DV+S+GV
Sbjct: 171 LVGENYVAKIADFGLSRGQEVYVKKTMGRLPVR----WMAIESLNYSVYTTNSDVWSYGV 226
Query: 358 LLLEIIS 364
LL EI+S
Sbjct: 227 LLWEIVS 233
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 143/326 (43%), Gaps = 54/326 (16%)
Query: 152 NLRCFSYKALEEATDNFKEE-------AGRGSFGIVYKGVI--ETTRTSTTAVAVKKLDR 202
+L ++K LE+ F + G G FG V K R T VAVK L
Sbjct: 4 SLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE 63
Query: 203 VFQDGE-KEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK- 260
E ++ +E V+ Q +H ++++L G C + LL+ E+ G+L FL + K
Sbjct: 64 NASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKV 123
Query: 261 ------------------PSWNLRT-----NIAFQIARGLLYLHEDCSSQIIHCDIKPQN 297
P T + A+QI++G+ YL E ++H D+ +N
Sbjct: 124 GPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MSLVHRDLAARN 180
Query: 298 ILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGV 357
IL+ + +ISDFGL++ + S ++ R ++A E T + DV+SFGV
Sbjct: 181 ILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGV 240
Query: 358 LLLEIISCRKSFDIEMGEEY-AILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMV 416
LL EI++ G Y I + F+ + G ME ++ C E++ +
Sbjct: 241 LLWEIVTLG-------GNPYPGIPPERLFNLLKTGH-------RMERPDN--CSEEMYRL 284
Query: 417 SIWCIQEDPSLRPTMRKVSQMLEGVV 442
+ C +++P RP +S+ LE ++
Sbjct: 285 MLQCWKQEPDKRPVFADISKDLEKMM 310
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 107/209 (51%), Gaps = 8/209 (3%)
Query: 161 LEEATDNFKEEAGRGSFGIVYKGVIETTRTST-TAVAVKKLDRVFQDGEKEFKNEVVVIG 219
EE F + G+G+FG V + + +T VAVKKL ++ ++F+ E+ ++
Sbjct: 10 FEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 69
Query: 220 QTHHKNLVRLLGFCDEG--QNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIARG 276
H N+V+ G C +N L+ EFL G+L +L + + +++ QI +G
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKG 129
Query: 277 LLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLN-QSKTIKTAIRGTKGY 335
+ YL + + IH D+ +NIL+++ +I DFGL K+L + + +K +
Sbjct: 130 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 186
Query: 336 VAPEWYRKSTITAKVDVYSFGVLLLEIIS 364
APE +S + DV+SFGV+L E+ +
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 144/326 (44%), Gaps = 54/326 (16%)
Query: 152 NLRCFSYKALEEATDNFKEE-------AGRGSFGIVYKGVI--ETTRTSTTAVAVKKLDR 202
+L ++K LE+ F + G G FG V K R T VAVK L
Sbjct: 4 SLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE 63
Query: 203 VFQDGE-KEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK- 260
E ++ +E V+ Q +H ++++L G C + LL+ E+ G+L FL + K
Sbjct: 64 NASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKV 123
Query: 261 ------------------PSWNLRT-----NIAFQIARGLLYLHEDCSSQIIHCDIKPQN 297
P T + A+QI++G+ YL E +++H D+ +N
Sbjct: 124 GPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARN 180
Query: 298 ILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGV 357
IL+ + +ISDFGL++ + S ++ R ++A E T + DV+SFGV
Sbjct: 181 ILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGV 240
Query: 358 LLLEIISCRKSFDIEMGEEY-AILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMV 416
LL EI++ G Y I + F+ + G ME ++ C E++ +
Sbjct: 241 LLWEIVTLG-------GNPYPGIPPERLFNLLKTGH-------RMERPDN--CSEEMYRL 284
Query: 417 SIWCIQEDPSLRPTMRKVSQMLEGVV 442
+ C +++P RP +S+ LE ++
Sbjct: 285 MLQCWKQEPDKRPVFADISKDLEKMM 310
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 104/207 (50%), Gaps = 20/207 (9%)
Query: 173 GRGSFGIVYKGVIE--TTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRL 229
G G+FG VY+G + S VAVK L V+ + E +F E ++I + +H+N+VR
Sbjct: 54 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRC 113
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--------QIARGLLYLH 281
+G + R ++ E + G L SFL +P + +++A IA G YL
Sbjct: 114 IGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 282 EDCSSQIIHCDIKPQNILLD---DHYNARISDFGLAK-LLTLNQSKTIKTAIRGTKGYVA 337
E+ IH DI +N LL A+I DFG+A+ + + + A+ K ++
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMP 228
Query: 338 PEWYRKSTITAKVDVYSFGVLLLEIIS 364
PE + + T+K D +SFGVLL EI S
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 131/292 (44%), Gaps = 42/292 (14%)
Query: 156 FSYKALEEATDN---FKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE---- 208
F L DN ++++ G+G FG+V+KG + ++ VA+K L +GE
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKS---VVAIKSLILGDSEGETEMI 64
Query: 209 ---KEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP-SWN 264
+EF+ EV ++ +H N+V+L G +V EF+ G L L P W+
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWS 122
Query: 265 LRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNIL---LDDHYN--ARISDFGLAKLLTL 319
++ + IA G+ Y+ ++ + I+H D++ NI LD++ A+++DFG T
Sbjct: 123 VKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG-----TS 176
Query: 320 NQSKTIKTAIRGTKGYVAPEWY--RKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY 377
QS + + G ++APE + + T K D YSF ++L I++ FD EY
Sbjct: 177 QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD-----EY 231
Query: 378 AILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRP 429
+ + R L + D C +L V C DP RP
Sbjct: 232 SYGKIKFINMIREEGLRPTIPED--------CPPRLRNVIELCWSGDPKKRP 275
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 104/198 (52%), Gaps = 10/198 (5%)
Query: 171 EAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKNLVRL 229
E G G+FG V +GV R VA+K L + + + +E E ++ Q + +VRL
Sbjct: 343 ELGCGNFGSVRQGVYRM-RKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRL 401
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLK--PSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+G C + + +LV E G L FL G + P N+ + Q++ G+ YL E
Sbjct: 402 IGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNV-AELLHQVSMGMKYLEE---KN 456
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQS-KTIKTAIRGTKGYVAPEWYRKSTI 346
+H ++ +N+LL + + A+ISDFGL+K L + S T ++A + + APE
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 516
Query: 347 TAKVDVYSFGVLLLEIIS 364
+++ DV+S+GV + E +S
Sbjct: 517 SSRSDVWSYGVTMWEALS 534
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 120/272 (44%), Gaps = 33/272 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G G FG V+ G T T VA+K L E F E ++ + H LV+L
Sbjct: 18 GNGQFGEVWMG----TWNGNTKVAIKTLKPGTMSPES-FLEEAQIMKKLKHDKLVQLYAV 72
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGLLYLHEDCSSQIIH 290
E + +V E++N G+L FL + L ++A Q+A G+ Y+ IH
Sbjct: 73 VSE-EPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER---MNYIH 128
Query: 291 CDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVAPEWYRKSTIT 347
D++ NIL+ + +I+DFGLA+L+ N+ TA +G K + APE T
Sbjct: 129 RDLRSANILVGNGLICKIADFGLARLIEDNEX----TARQGAKFPIKWTAPEAALYGRFT 184
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
K DV+SFG+LL E+++ + + N ++ + VE
Sbjct: 185 IKSDVWSFGILLTELVTKGRV---------------PYPGMNNREVLEQVERGYRMPCPQ 229
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
C L + I C ++DP RPT + LE
Sbjct: 230 DCPISLHELMIHCWKKDPEERPTFEYLQSFLE 261
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 108/209 (51%), Gaps = 8/209 (3%)
Query: 161 LEEATDNFKEEAGRGSFGIVYKGVIETTRTST-TAVAVKKLDRVFQDGEKEFKNEVVVIG 219
EE F ++ G+G+FG V + + +T VAVKKL ++ ++F+ E+ ++
Sbjct: 11 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 70
Query: 220 QTHHKNLVRLLGFCDEG--QNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIARG 276
H N+V+ G C +N L+ E+L G+L +L + + +++ QI +G
Sbjct: 71 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 130
Query: 277 LLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLN-QSKTIKTAIRGTKGY 335
+ YL + + IH D+ +NIL+++ +I DFGL K+L + + +K +
Sbjct: 131 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 187
Query: 336 VAPEWYRKSTITAKVDVYSFGVLLLEIIS 364
APE +S + DV+SFGV+L E+ +
Sbjct: 188 YAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 108/209 (51%), Gaps = 8/209 (3%)
Query: 161 LEEATDNFKEEAGRGSFGIVYKGVIETTRTST-TAVAVKKLDRVFQDGEKEFKNEVVVIG 219
EE F ++ G+G+FG V + + +T VAVKKL ++ ++F+ E+ ++
Sbjct: 10 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 69
Query: 220 QTHHKNLVRLLGFCDEG--QNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIARG 276
H N+V+ G C +N L+ E+L G+L +L + + +++ QI +G
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 129
Query: 277 LLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLN-QSKTIKTAIRGTKGY 335
+ YL + + IH D+ +NIL+++ +I DFGL K+L + + +K +
Sbjct: 130 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 186
Query: 336 VAPEWYRKSTITAKVDVYSFGVLLLEIIS 364
APE +S + DV+SFGV+L E+ +
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 108/209 (51%), Gaps = 8/209 (3%)
Query: 161 LEEATDNFKEEAGRGSFGIVYKGVIETTRTST-TAVAVKKLDRVFQDGEKEFKNEVVVIG 219
EE F ++ G+G+FG V + + +T VAVKKL ++ ++F+ E+ ++
Sbjct: 6 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 65
Query: 220 QTHHKNLVRLLGFCDEG--QNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIARG 276
H N+V+ G C +N L+ E+L G+L +L + + +++ QI +G
Sbjct: 66 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 125
Query: 277 LLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLN-QSKTIKTAIRGTKGY 335
+ YL + + IH D+ +NIL+++ +I DFGL K+L + + +K +
Sbjct: 126 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 182
Query: 336 VAPEWYRKSTITAKVDVYSFGVLLLEIIS 364
APE +S + DV+SFGV+L E+ +
Sbjct: 183 YAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 108/209 (51%), Gaps = 8/209 (3%)
Query: 161 LEEATDNFKEEAGRGSFGIVYKGVIETTRTST-TAVAVKKLDRVFQDGEKEFKNEVVVIG 219
EE F ++ G+G+FG V + + +T VAVKKL ++ ++F+ E+ ++
Sbjct: 13 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 72
Query: 220 QTHHKNLVRLLGFCDEG--QNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIARG 276
H N+V+ G C +N L+ E+L G+L +L + + +++ QI +G
Sbjct: 73 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 132
Query: 277 LLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLN-QSKTIKTAIRGTKGY 335
+ YL + + IH D+ +NIL+++ +I DFGL K+L + + +K +
Sbjct: 133 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 189
Query: 336 VAPEWYRKSTITAKVDVYSFGVLLLEIIS 364
APE +S + DV+SFGV+L E+ +
Sbjct: 190 YAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 108/209 (51%), Gaps = 8/209 (3%)
Query: 161 LEEATDNFKEEAGRGSFGIVYKGVIETTRTST-TAVAVKKLDRVFQDGEKEFKNEVVVIG 219
EE F ++ G+G+FG V + + +T VAVKKL ++ ++F+ E+ ++
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 66
Query: 220 QTHHKNLVRLLGFCDEG--QNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIARG 276
H N+V+ G C +N L+ E+L G+L +L + + +++ QI +G
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 277 LLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLN-QSKTIKTAIRGTKGY 335
+ YL + + IH D+ +NIL+++ +I DFGL K+L + + +K +
Sbjct: 127 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 183
Query: 336 VAPEWYRKSTITAKVDVYSFGVLLLEIIS 364
APE +S + DV+SFGV+L E+ +
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 108/209 (51%), Gaps = 8/209 (3%)
Query: 161 LEEATDNFKEEAGRGSFGIVYKGVIETTRTST-TAVAVKKLDRVFQDGEKEFKNEVVVIG 219
EE F ++ G+G+FG V + + +T VAVKKL ++ ++F+ E+ ++
Sbjct: 12 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 71
Query: 220 QTHHKNLVRLLGFCDEG--QNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIARG 276
H N+V+ G C +N L+ E+L G+L +L + + +++ QI +G
Sbjct: 72 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 131
Query: 277 LLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLN-QSKTIKTAIRGTKGY 335
+ YL + + IH D+ +NIL+++ +I DFGL K+L + + +K +
Sbjct: 132 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 188
Query: 336 VAPEWYRKSTITAKVDVYSFGVLLLEIIS 364
APE +S + DV+SFGV+L E+ +
Sbjct: 189 YAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 108/209 (51%), Gaps = 8/209 (3%)
Query: 161 LEEATDNFKEEAGRGSFGIVYKGVIETTRTST-TAVAVKKLDRVFQDGEKEFKNEVVVIG 219
EE F ++ G+G+FG V + + +T VAVKKL ++ ++F+ E+ ++
Sbjct: 38 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 97
Query: 220 QTHHKNLVRLLGFCDEG--QNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIARG 276
H N+V+ G C +N L+ E+L G+L +L + + +++ QI +G
Sbjct: 98 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 157
Query: 277 LLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLN-QSKTIKTAIRGTKGY 335
+ YL + + IH D+ +NIL+++ +I DFGL K+L + + +K +
Sbjct: 158 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 214
Query: 336 VAPEWYRKSTITAKVDVYSFGVLLLEIIS 364
APE +S + DV+SFGV+L E+ +
Sbjct: 215 YAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 108/209 (51%), Gaps = 8/209 (3%)
Query: 161 LEEATDNFKEEAGRGSFGIVYKGVIETTRTST-TAVAVKKLDRVFQDGEKEFKNEVVVIG 219
EE F ++ G+G+FG V + + +T VAVKKL ++ ++F+ E+ ++
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 66
Query: 220 QTHHKNLVRLLGFCDEG--QNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIARG 276
H N+V+ G C +N L+ E+L G+L +L + + +++ QI +G
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 277 LLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLN-QSKTIKTAIRGTKGY 335
+ YL + + IH D+ +NIL+++ +I DFGL K+L + + +K +
Sbjct: 127 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 183
Query: 336 VAPEWYRKSTITAKVDVYSFGVLLLEIIS 364
APE +S + DV+SFGV+L E+ +
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 108/209 (51%), Gaps = 8/209 (3%)
Query: 161 LEEATDNFKEEAGRGSFGIVYKGVIETTRTST-TAVAVKKLDRVFQDGEKEFKNEVVVIG 219
EE F ++ G+G+FG V + + +T VAVKKL ++ ++F+ E+ ++
Sbjct: 14 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 73
Query: 220 QTHHKNLVRLLGFCDEG--QNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIARG 276
H N+V+ G C +N L+ E+L G+L +L + + +++ QI +G
Sbjct: 74 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 133
Query: 277 LLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLN-QSKTIKTAIRGTKGY 335
+ YL + + IH D+ +NIL+++ +I DFGL K+L + + +K +
Sbjct: 134 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 190
Query: 336 VAPEWYRKSTITAKVDVYSFGVLLLEIIS 364
APE +S + DV+SFGV+L E+ +
Sbjct: 191 YAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 108/209 (51%), Gaps = 8/209 (3%)
Query: 161 LEEATDNFKEEAGRGSFGIVYKGVIETTRTST-TAVAVKKLDRVFQDGEKEFKNEVVVIG 219
EE F ++ G+G+FG V + + +T VAVKKL ++ ++F+ E+ ++
Sbjct: 5 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 64
Query: 220 QTHHKNLVRLLGFCDEG--QNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIARG 276
H N+V+ G C +N L+ E+L G+L +L + + +++ QI +G
Sbjct: 65 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 124
Query: 277 LLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLN-QSKTIKTAIRGTKGY 335
+ YL + + IH D+ +NIL+++ +I DFGL K+L + + +K +
Sbjct: 125 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 181
Query: 336 VAPEWYRKSTITAKVDVYSFGVLLLEIIS 364
APE +S + DV+SFGV+L E+ +
Sbjct: 182 YAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 133/310 (42%), Gaps = 52/310 (16%)
Query: 167 NFKEEAGRGSFGIVYKGVIETT------RTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIG 219
F + G G+FG V+E T + VAVK L EKE +E+ ++
Sbjct: 34 QFGKTLGAGAFG----KVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 89
Query: 220 QT-HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF----GNLKPSW----------- 263
H+N+V LLG C G L++ E+ G L +FL L PS
Sbjct: 90 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDK 149
Query: 264 ------NLRTNIAF--QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAK 315
LR + F Q+A+G+ +L S IH D+ +N+LL + + A+I DFGLA+
Sbjct: 150 EDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 206
Query: 316 LLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGE 375
+ + + +K R ++APE T + DV+S+G+LL EI F + +
Sbjct: 207 DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI------FSLGLNP 260
Query: 376 EYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVS 435
IL N K LV+ + + + + C +P+ RPT +++
Sbjct: 261 YPGILV--------NSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQIC 312
Query: 436 QMLEGVVEVD 445
L+ + D
Sbjct: 313 SFLQEQAQED 322
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 132/292 (45%), Gaps = 42/292 (14%)
Query: 156 FSYKALEEATDN---FKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE---- 208
F L DN ++++ G+G FG+V+KG + ++ VA+K L +GE
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKS---VVAIKSLILGDSEGETEMI 64
Query: 209 ---KEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP-SWN 264
+EF+ EV ++ +H N+V+L G +V EF+ G L L P W+
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWS 122
Query: 265 LRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNIL---LDDHYN--ARISDFGLAKLLTL 319
++ + IA G+ Y+ ++ + I+H D++ NI LD++ A+++DF L++
Sbjct: 123 VKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ---- 177
Query: 320 NQSKTIKTAIRGTKGYVAPEWY--RKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY 377
QS + + G ++APE + + T K D YSF ++L I++ FD EY
Sbjct: 178 -QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD-----EY 231
Query: 378 AILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRP 429
+ + R L + D C +L V C DP RP
Sbjct: 232 SYGKIKFINMIREEGLRPTIPED--------CPPRLRNVIELCWSGDPKKRP 275
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 108/209 (51%), Gaps = 8/209 (3%)
Query: 161 LEEATDNFKEEAGRGSFGIVYKGVIETTRTST-TAVAVKKLDRVFQDGEKEFKNEVVVIG 219
EE F ++ G+G+FG V + + +T VAVKKL ++ ++F+ E+ ++
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 84
Query: 220 QTHHKNLVRLLGFCDEG--QNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIARG 276
H N+V+ G C +N L+ E+L G+L +L + + +++ QI +G
Sbjct: 85 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 144
Query: 277 LLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLN-QSKTIKTAIRGTKGY 335
+ YL + + IH D+ +NIL+++ +I DFGL K+L + + +K +
Sbjct: 145 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 201
Query: 336 VAPEWYRKSTITAKVDVYSFGVLLLEIIS 364
APE +S + DV+SFGV+L E+ +
Sbjct: 202 YAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 131/280 (46%), Gaps = 33/280 (11%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKNLVRLLG 231
G+G FG+VY G + A+K L R+ + + E F E +++ +H N++ L+G
Sbjct: 30 GKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIG 89
Query: 232 FC--DEGQNRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHEDCSSQI 288
EG +L+ ++ +G L F+ + P+ + Q+ARG+ YL E +
Sbjct: 90 IMLPPEGLPHVLL-PYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAE---QKF 145
Query: 289 IHCDIKPQNILLDDHYNARISDFGLAK------LLTLNQSKTIKTAIRGTKGYVAPEWYR 342
+H D+ +N +LD+ + +++DFGLA+ ++ Q + + ++ T A E +
Sbjct: 146 VHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWT----ALESLQ 201
Query: 343 KSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDME 402
T K DV+SFGVLL E+++ Y + + + L +G
Sbjct: 202 TYRFTTKSDVWSFGVLLWELLT-------RGAPPYRHIDPFDLTHF-------LAQGRRL 247
Query: 403 AMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
+ C + L V C + DP++RPT R + +E +V
Sbjct: 248 PQPEY-CPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIV 286
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 108/209 (51%), Gaps = 8/209 (3%)
Query: 161 LEEATDNFKEEAGRGSFGIVYKGVIETTRTST-TAVAVKKLDRVFQDGEKEFKNEVVVIG 219
EE F ++ G+G+FG V + + +T VAVKKL ++ ++F+ E+ ++
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 84
Query: 220 QTHHKNLVRLLGFCDEG--QNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIARG 276
H N+V+ G C +N L+ E+L G+L +L + + +++ QI +G
Sbjct: 85 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 144
Query: 277 LLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLN-QSKTIKTAIRGTKGY 335
+ YL + + IH D+ +NIL+++ +I DFGL K+L + + +K +
Sbjct: 145 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 201
Query: 336 VAPEWYRKSTITAKVDVYSFGVLLLEIIS 364
APE +S + DV+SFGV+L E+ +
Sbjct: 202 YAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 134/289 (46%), Gaps = 25/289 (8%)
Query: 159 KALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 217
K +E + + G G FG V G ++ VA+K L + + ++ +F E +
Sbjct: 17 KEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASI 76
Query: 218 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIARG 276
+GQ H N++ L G + + ++V E++ NG+L +FL N ++ + I+ G
Sbjct: 77 MGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAG 136
Query: 277 LLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK--- 333
+ YL + +H D+ +NIL++ + ++SDFGL+++L + T RG K
Sbjct: 137 MKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--RGGKIPI 191
Query: 334 GYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKL 393
+ APE T+ DV+S+G+++ E++S + EM + I
Sbjct: 192 RWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVI-------------- 237
Query: 394 DDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
VE + + C L + + C Q++ + RP ++ ML+ ++
Sbjct: 238 -KAVEEGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKLI 285
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 130/297 (43%), Gaps = 42/297 (14%)
Query: 173 GRGSFGIVYK----GVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVR 228
GRG+FG V + G+ +T T AV + K + ++I HH N+V
Sbjct: 36 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 95
Query: 229 LLGFCDE-GQNRLLVYEFLNNGTLASFLFGN--------------LKPSWNLRTNI--AF 271
LLG C + G +++ EF G L+++L K L I +F
Sbjct: 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 155
Query: 272 QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRG 331
Q+A+G+ +L S + IH D+ +NILL + +I DFGLA+ + + K R
Sbjct: 156 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 332 TKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYR 389
++APE T + DV+SFGVLL EI S S +++ EE+ C R
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------CRR 263
Query: 390 NGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEVDV 446
L EG D E + + C +PS RPT ++ + L +++ +
Sbjct: 264 ------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 130/297 (43%), Gaps = 42/297 (14%)
Query: 173 GRGSFGIVYK----GVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVR 228
GRG+FG V + G+ +T T AV + K + ++I HH N+V
Sbjct: 27 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 86
Query: 229 LLGFCDE-GQNRLLVYEFLNNGTLASFLFGN--------------LKPSWNLRTNI--AF 271
LLG C + G +++ EF G L+++L K L I +F
Sbjct: 87 LLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 146
Query: 272 QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRG 331
Q+A+G+ +L S + IH D+ +NILL + +I DFGLA+ + + K R
Sbjct: 147 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 203
Query: 332 TKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYR 389
++APE T + DV+SFGVLL EI S S +++ EE+ C R
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------CRR 254
Query: 390 NGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEVDV 446
L EG D E + + C +PS RPT ++ + L +++ +
Sbjct: 255 ------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 304
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 130/297 (43%), Gaps = 42/297 (14%)
Query: 173 GRGSFGIVYK----GVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVR 228
GRG+FG V + G+ +T T AV + K + ++I HH N+V
Sbjct: 27 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 86
Query: 229 LLGFCDE-GQNRLLVYEFLNNGTLASFLFGN--------------LKPSWNLRTNI--AF 271
LLG C + G +++ EF G L+++L K L I +F
Sbjct: 87 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 146
Query: 272 QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRG 331
Q+A+G+ +L S + IH D+ +NILL + +I DFGLA+ + + K R
Sbjct: 147 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 203
Query: 332 TKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYR 389
++APE T + DV+SFGVLL EI S S +++ EE+ C R
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------CRR 254
Query: 390 NGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEVDV 446
L EG D E + + C +PS RPT ++ + L +++ +
Sbjct: 255 ------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 304
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 123/264 (46%), Gaps = 43/264 (16%)
Query: 163 EATDNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVI 218
E +NF+ E+ G G++G+VYK + + VA+KK LD + E+ ++
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 63
Query: 219 GQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIA 274
+ +H N+V+LL LV+EFL+ AS L G P L + FQ+
Sbjct: 64 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLL 120
Query: 275 RGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKG 334
+GL + H S +++H D+KPQN+L++ +++DFGLA + +R
Sbjct: 121 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYTH 169
Query: 335 YVAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAF 385
V WYR I + VD++S G + E+++ R F D E+ D F
Sbjct: 170 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLF 221
Query: 386 DCYRN-GKLDDLVEGDMEAMNDIK 408
+R G D++V + +M D K
Sbjct: 222 RIFRTLGTPDEVVWPGVTSMPDYK 245
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 130/297 (43%), Gaps = 42/297 (14%)
Query: 173 GRGSFGIVYK----GVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVR 228
GRG+FG V + G+ +T T AV + K + ++I HH N+V
Sbjct: 36 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 95
Query: 229 LLGFCDE-GQNRLLVYEFLNNGTLASFLFGN--------------LKPSWNLRTNI--AF 271
LLG C + G +++ EF G L+++L K L I +F
Sbjct: 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 155
Query: 272 QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRG 331
Q+A+G+ +L S + IH D+ +NILL + +I DFGLA+ + + K R
Sbjct: 156 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARL 212
Query: 332 TKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYR 389
++APE T + DV+SFGVLL EI S S +++ EE+ C R
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------CRR 263
Query: 390 NGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEVDV 446
L EG D E + + C +PS RPT ++ + L +++ +
Sbjct: 264 ------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 102/194 (52%), Gaps = 10/194 (5%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVR 228
E G+GSFG V+KG+ T+ VA+K +D +D ++ + E+ V+ Q + +
Sbjct: 29 ERIGKGSFGEVFKGIDNRTQQ---VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTK 85
Query: 229 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQI 288
G +G ++ E+L G+ L + + T + +I +GL YLH S +
Sbjct: 86 YYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLK-EILKGLDYLH---SEKK 141
Query: 289 IHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITA 348
IH DIK N+LL + + +++DFG+A LT Q K + GT ++APE ++S +
Sbjct: 142 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK--RNTFVGTPFWMAPEVIQQSAYDS 199
Query: 349 KVDVYSFGVLLLEI 362
K D++S G+ +E+
Sbjct: 200 KADIWSLGITAIEL 213
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 110/226 (48%), Gaps = 21/226 (9%)
Query: 155 CFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTA-VAVKKLDRVFQDGEKEFKN 213
C EE + + G+G+FG V + +T A VAVK+L D +++F+
Sbjct: 1 CQDPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR 60
Query: 214 EVVVIGQTHHKNLVRLLG--FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF 271
E+ ++ H +V+ G + Q+ LV E+L +G L FL R
Sbjct: 61 EIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL---------QRHRARL 111
Query: 272 QIARGLLYLHEDC-------SSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQS-K 323
+R LLY + C S + +H D+ +NIL++ + +I+DFGLAKLL L++
Sbjct: 112 DASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYY 171
Query: 324 TIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIIS-CRKS 368
++ + + APE + + + DV+SFGV+L E+ + C KS
Sbjct: 172 VVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKS 217
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 109/220 (49%), Gaps = 21/220 (9%)
Query: 161 LEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTA-VAVKKLDRVFQDGEKEFKNEVVVIG 219
EE + + G+G+FG V + +T A VAVK+L D +++F+ E+ ++
Sbjct: 4 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 63
Query: 220 QTHHKNLVRLLGFC-DEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGL 277
H +V+ G G+ L LV E+L +G L FL R +R L
Sbjct: 64 ALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFL---------QRHRARLDASRLL 114
Query: 278 LYLHEDC-------SSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQ-SKTIKTAI 329
LY + C S + +H D+ +NIL++ + +I+DFGLAKLL L++ ++
Sbjct: 115 LYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPG 174
Query: 330 RGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIIS-CRKS 368
+ + APE + + + DV+SFGV+L E+ + C KS
Sbjct: 175 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKS 214
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 123/264 (46%), Gaps = 43/264 (16%)
Query: 163 EATDNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVI 218
E +NF+ E+ G G++G+VYK + + VA+KK LD + E+ ++
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 63
Query: 219 GQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIA 274
+ +H N+V+LL LV+EFL+ AS L G P L + FQ+
Sbjct: 64 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLL 120
Query: 275 RGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKG 334
+GL + H S +++H D+KPQN+L++ +++DFGLA + +R
Sbjct: 121 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYTH 169
Query: 335 YVAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAF 385
V WYR I + VD++S G + E+++ R F D E+ D F
Sbjct: 170 EVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLF 221
Query: 386 DCYRN-GKLDDLVEGDMEAMNDIK 408
+R G D++V + +M D K
Sbjct: 222 RIFRTLGTPDEVVWPGVTSMPDYK 245
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 109/220 (49%), Gaps = 21/220 (9%)
Query: 161 LEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTA-VAVKKLDRVFQDGEKEFKNEVVVIG 219
EE + + G+G+FG V + +T A VAVK+L D +++F+ E+ ++
Sbjct: 8 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 67
Query: 220 QTHHKNLVRLLG--FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGL 277
H +V+ G + Q+ LV E+L +G L FL R +R L
Sbjct: 68 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL---------QRHRARLDASRLL 118
Query: 278 LYLHEDC-------SSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQS-KTIKTAI 329
LY + C S + +H D+ +NIL++ + +I+DFGLAKLL L++ ++
Sbjct: 119 LYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPG 178
Query: 330 RGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIIS-CRKS 368
+ + APE + + + DV+SFGV+L E+ + C KS
Sbjct: 179 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKS 218
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 122/280 (43%), Gaps = 31/280 (11%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 229
+E G G FG+V G VAVK + + E EF E + + H LV+
Sbjct: 14 KELGSGQFGVVKLG----KWKGQYDVAVKMI-KEGSMSEDEFFQEAQTMMKLSHPKLVKF 68
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGN---LKPSWNLRTNIAFQIARGLLYLHEDCSS 286
G C + +V E+++NG L ++L + L+PS L + + + G+ +L S
Sbjct: 69 YGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLL--EMCYDVCEGMAFLE---SH 123
Query: 287 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTI 346
Q IH D+ +N L+D ++SDFG+ + + L+ + + APE +
Sbjct: 124 QFIHRDLAARNCLVDRDLCVKVSDFGMTRYV-LDDQYVSSVGTKFPVKWSAPEVFHYFKY 182
Query: 347 TAKVDVYSFGVLLLEIISCRK-SFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMN 405
++K DV++FG+L+ E+ S K +D+ E + YR D + M +
Sbjct: 183 SSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQIMYS-- 240
Query: 406 DIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEVD 445
C E P RPT +++ +E + E D
Sbjct: 241 --------------CWHELPEKRPTFQQLLSSIEPLREKD 266
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 110/226 (48%), Gaps = 21/226 (9%)
Query: 155 CFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTA-VAVKKLDRVFQDGEKEFKN 213
C EE + + G+G+FG V + +T A VAVK+L D +++F+
Sbjct: 14 CQDPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR 73
Query: 214 EVVVIGQTHHKNLVRLLG--FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF 271
E+ ++ H +V+ G + Q+ LV E+L +G L FL R
Sbjct: 74 EIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL---------QRHRARL 124
Query: 272 QIARGLLYLHEDC-------SSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQS-K 323
+R LLY + C S + +H D+ +NIL++ + +I+DFGLAKLL L++
Sbjct: 125 DASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYY 184
Query: 324 TIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIIS-CRKS 368
++ + + APE + + + DV+SFGV+L E+ + C KS
Sbjct: 185 VVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKS 230
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 103/207 (49%), Gaps = 20/207 (9%)
Query: 173 GRGSFGIVYKGVIE--TTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRL 229
G G+FG VY+G + S VAVK L V + E +F E ++I + +H+N+VR
Sbjct: 54 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRC 113
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--------QIARGLLYLH 281
+G + R ++ E + G L SFL +P + +++A IA G YL
Sbjct: 114 IGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 282 EDCSSQIIHCDIKPQNILLD---DHYNARISDFGLAK-LLTLNQSKTIKTAIRGTKGYVA 337
E+ IH DI +N LL A+I DFG+A+ + + + A+ K ++
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMP 228
Query: 338 PEWYRKSTITAKVDVYSFGVLLLEIIS 364
PE + + T+K D +SFGVLL EI S
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 133/293 (45%), Gaps = 33/293 (11%)
Query: 159 KALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 217
K L+ + + G G FG V G ++ AVA+K L + + ++ +F E +
Sbjct: 38 KELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASI 97
Query: 218 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAF 271
+GQ H N+V L G G+ ++V EF+ NG L +FL F ++ LR
Sbjct: 98 MGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRG---- 153
Query: 272 QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRG 331
IA G+ YL +H D+ +NIL++ + ++SDFGL++++ + + + T G
Sbjct: 154 -IAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIE-DDPEAVYTTTGG 208
Query: 332 --TKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR 389
+ APE + T+ DV+S+G+++ E++S Y W
Sbjct: 209 KIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS------------YGERPYWDMS--- 253
Query: 390 NGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
N + +E + C L + + C Q++ + RP ++ +L+ ++
Sbjct: 254 NQDVIKAIEEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGILDKMI 306
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 141/310 (45%), Gaps = 36/310 (11%)
Query: 149 VETNLRCFSYKALEEATDNFKEEA-----------GRGSFGIVYKGVIETTRTSTTAVAV 197
V T + F+++ +A F +E G G FG V G ++ VA+
Sbjct: 3 VRTFVDPFTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAI 62
Query: 198 KKLDRVFQDGEK-EFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF 256
K L + D ++ +F +E ++GQ H N++ L G + + +++ E++ NG+L +FL
Sbjct: 63 KTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR 122
Query: 257 GNLKPSWNLR-TNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAK 315
N ++ + I G+ YL D S+ +H D+ +NIL++ + ++SDFG+++
Sbjct: 123 KNDGRFTVIQLVGMLRGIGSGMKYL-SDMSA--VHRDLAARNILVNSNLVCKVSDFGMSR 179
Query: 316 LLTLNQSKTIKTAIRGTK---GYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIE 372
+L + T RG K + APE T+ DV+S+G+++ E++S
Sbjct: 180 VLEDDPEAAYTT--RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS-------- 229
Query: 373 MGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMR 432
Y W N + +E + C L + + C Q++ S RP
Sbjct: 230 ----YGERPYWDMS---NQDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFG 282
Query: 433 KVSQMLEGVV 442
++ ML+ ++
Sbjct: 283 QIVNMLDKLI 292
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 130/297 (43%), Gaps = 42/297 (14%)
Query: 173 GRGSFGIVYK----GVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVR 228
GRG+FG V + G+ +T T AV + K + ++I HH N+V
Sbjct: 38 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 97
Query: 229 LLGFCDE-GQNRLLVYEFLNNGTLASFLFGN--------------LKPSWNLRTNI--AF 271
LLG C + G +++ EF G L+++L K L I +F
Sbjct: 98 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSF 157
Query: 272 QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRG 331
Q+A+G+ +L S + IH D+ +NILL + +I DFGLA+ + + K R
Sbjct: 158 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 214
Query: 332 TKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYR 389
++APE T + DV+SFGVLL EI S S +++ EE+ C R
Sbjct: 215 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------CRR 265
Query: 390 NGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEVDV 446
L EG D E + + C +PS RPT ++ + L +++ +
Sbjct: 266 ------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 315
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 108/209 (51%), Gaps = 8/209 (3%)
Query: 161 LEEATDNFKEEAGRGSFGIVYKGVIETTRTST-TAVAVKKLDRVFQDGEKEFKNEVVVIG 219
EE F ++ G+G+FG V + + +T VAVKKL ++ ++F+ E+ ++
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 66
Query: 220 QTHHKNLVRLLGFCDEG--QNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIARG 276
H N+V+ G C +N L+ E+L G+L +L + + +++ QI +G
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 277 LLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQS-KTIKTAIRGTKGY 335
+ YL + + IH D+ +NIL+++ +I DFGL K+L ++ +K +
Sbjct: 127 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFW 183
Query: 336 VAPEWYRKSTITAKVDVYSFGVLLLEIIS 364
APE +S + DV+SFGV+L E+ +
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 133/302 (44%), Gaps = 39/302 (12%)
Query: 159 KALEEATDNFKEEAGRGSFGIVYKGVI--ETTRTSTTAVAVKKL-DRVFQDGEKEFKNEV 215
K + + F EE G FG VYKG + T AVA+K L D+ +EF++E
Sbjct: 4 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEA 63
Query: 216 VVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL-----FGNLKPSWNLRT--- 267
++ + H N+V LLG + Q +++ + ++G L FL ++ + + RT
Sbjct: 64 MLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS 123
Query: 268 --------NIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAK-LLT 318
++ QIA G+ YL S ++H D+ +N+L+ D N +ISD GL + +
Sbjct: 124 ALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYA 180
Query: 319 LNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYA 378
+ K + ++ + ++APE + D++S+GV+L E+ S Y
Sbjct: 181 ADYYKLLGNSLLPIR-WMAPEAIMYGKFSIDSDIWSYGVVLWEVFS------------YG 227
Query: 379 ILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQML 438
+ + Y N + +++ C + + I C E PS RP + + L
Sbjct: 228 LQP---YCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL 284
Query: 439 EG 440
Sbjct: 285 RA 286
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 123/263 (46%), Gaps = 43/263 (16%)
Query: 164 ATDNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIG 219
+ +NF+ E+ G G++G+VYK + + VA+KK LD + E+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 220 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIAR 275
+ +H N+V+LL LV+EFL+ AS L G P L + FQ+ +
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLP---LIKSYLFQLLQ 117
Query: 276 GLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGY 335
GL + H S +++H D+KPQN+L++ +++DFGLA + +R
Sbjct: 118 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYXHE 166
Query: 336 VAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFD 386
V WYR I + VD++S G + E+++ R F D E+ D F
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFR 218
Query: 387 CYRN-GKLDDLVEGDMEAMNDIK 408
+R G D++V + +M D K
Sbjct: 219 IFRTLGTPDEVVWPGVTSMPDYK 241
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 123/263 (46%), Gaps = 43/263 (16%)
Query: 164 ATDNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIG 219
+ +NF+ E+ G G++G+VYK + + VA+KK LD + E+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 220 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIAR 275
+ +H N+V+LL LV+EFL+ AS L G P L + FQ+ +
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 117
Query: 276 GLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGY 335
GL + H S +++H D+KPQN+L++ +++DFGLA + +R
Sbjct: 118 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYXHE 166
Query: 336 VAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFD 386
V WYR I + VD++S G + E+++ R F D E+ D F
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFR 218
Query: 387 CYRN-GKLDDLVEGDMEAMNDIK 408
+R G D++V + +M D K
Sbjct: 219 IFRTLGTPDEVVWPGVTSMPDYK 241
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 123/263 (46%), Gaps = 43/263 (16%)
Query: 164 ATDNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIG 219
+ +NF+ E+ G G++G+VYK + + VA+KK LD + E+ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 59
Query: 220 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIAR 275
+ +H N+V+LL LV+EFL+ AS L G P L + FQ+ +
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 116
Query: 276 GLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGY 335
GL + H S +++H D+KPQN+L++ +++DFGLA + +R
Sbjct: 117 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYXHE 165
Query: 336 VAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFD 386
V WYR I + VD++S G + E+++ R F D E+ D F
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFR 217
Query: 387 CYRN-GKLDDLVEGDMEAMNDIK 408
+R G D++V + +M D K
Sbjct: 218 IFRTLGTPDEVVWPGVTSMPDYK 240
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 123/263 (46%), Gaps = 43/263 (16%)
Query: 164 ATDNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIG 219
+ +NF+ E+ G G++G+VYK + + VA+KK LD + E+ ++
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 61
Query: 220 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIAR 275
+ +H N+V+LL LV+EFL+ AS L G P L + FQ+ +
Sbjct: 62 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 118
Query: 276 GLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGY 335
GL + H S +++H D+KPQN+L++ +++DFGLA + +R
Sbjct: 119 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYXHE 167
Query: 336 VAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFD 386
V WYR I + VD++S G + E+++ R F D E+ D F
Sbjct: 168 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFR 219
Query: 387 CYRN-GKLDDLVEGDMEAMNDIK 408
+R G D++V + +M D K
Sbjct: 220 IFRTLGTPDEVVWPGVTSMPDYK 242
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 123/263 (46%), Gaps = 43/263 (16%)
Query: 164 ATDNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIG 219
+ +NF+ E+ G G++G+VYK + + VA+KK LD + E+ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 220 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIAR 275
+ +H N+V+LL LV+EFL+ AS L G P L + FQ+ +
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 114
Query: 276 GLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGY 335
GL + H S +++H D+KPQN+L++ +++DFGLA + +R
Sbjct: 115 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYXHE 163
Query: 336 VAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFD 386
V WYR I + VD++S G + E+++ R F D E+ D F
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFR 215
Query: 387 CYRN-GKLDDLVEGDMEAMNDIK 408
+R G D++V + +M D K
Sbjct: 216 IFRTLGTPDEVVWPGVTSMPDYK 238
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 103/207 (49%), Gaps = 20/207 (9%)
Query: 173 GRGSFGIVYKGVIE--TTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRL 229
G G+FG VY+G + S VAVK L V + E +F E ++I + +H+N+VR
Sbjct: 39 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 98
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--------QIARGLLYLH 281
+G + R ++ E + G L SFL +P + +++A IA G YL
Sbjct: 99 IGVSLQSLPRFILMELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 282 EDCSSQIIHCDIKPQNILLD---DHYNARISDFGLAK-LLTLNQSKTIKTAIRGTKGYVA 337
E+ IH DI +N LL A+I DFG+A+ + + + A+ K ++
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMP 213
Query: 338 PEWYRKSTITAKVDVYSFGVLLLEIIS 364
PE + + T+K D +SFGVLL EI S
Sbjct: 214 PEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 123/263 (46%), Gaps = 43/263 (16%)
Query: 164 ATDNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIG 219
+ +NF+ E+ G G++G+VYK + + VA+KK LD + E+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 220 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIAR 275
+ +H N+V+LL LV+EFL+ AS L G P L + FQ+ +
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 117
Query: 276 GLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGY 335
GL + H S +++H D+KPQN+L++ +++DFGLA + +R
Sbjct: 118 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYXHE 166
Query: 336 VAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFD 386
V WYR I + VD++S G + E+++ R F D E+ D F
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFR 218
Query: 387 CYRN-GKLDDLVEGDMEAMNDIK 408
+R G D++V + +M D K
Sbjct: 219 IFRTLGTPDEVVWPGVTSMPDYK 241
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 123/263 (46%), Gaps = 43/263 (16%)
Query: 164 ATDNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIG 219
+ +NF+ E+ G G++G+VYK + + VA+KK LD + E+ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 220 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIAR 275
+ +H N+V+LL LV+EFL+ AS L G P L + FQ+ +
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 114
Query: 276 GLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGY 335
GL + H S +++H D+KPQN+L++ +++DFGLA + +R
Sbjct: 115 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYXHE 163
Query: 336 VAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFD 386
V WYR I + VD++S G + E+++ R F D E+ D F
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFR 215
Query: 387 CYRN-GKLDDLVEGDMEAMNDIK 408
+R G D++V + +M D K
Sbjct: 216 IFRTLGTPDEVVWPGVTSMPDYK 238
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 123/263 (46%), Gaps = 43/263 (16%)
Query: 164 ATDNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIG 219
+ +NF+ E+ G G++G+VYK + + VA+KK LD + E+ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 59
Query: 220 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIAR 275
+ +H N+V+LL LV+EFL+ AS L G P L + FQ+ +
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 116
Query: 276 GLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGY 335
GL + H S +++H D+KPQN+L++ +++DFGLA + +R
Sbjct: 117 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYXHE 165
Query: 336 VAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFD 386
V WYR I + VD++S G + E+++ R F D E+ D F
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFR 217
Query: 387 CYRN-GKLDDLVEGDMEAMNDIK 408
+R G D++V + +M D K
Sbjct: 218 IFRTLGTPDEVVWPGVTSMPDYK 240
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 123/263 (46%), Gaps = 43/263 (16%)
Query: 164 ATDNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIG 219
+ +NF+ E+ G G++G+VYK + + VA+KK LD + E+ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 220 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIAR 275
+ +H N+V+LL LV+EFL+ AS L G P L + FQ+ +
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 114
Query: 276 GLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGY 335
GL + H S +++H D+KPQN+L++ +++DFGLA + +R
Sbjct: 115 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYXHE 163
Query: 336 VAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFD 386
V WYR I + VD++S G + E+++ R F D E+ D F
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFR 215
Query: 387 CYRN-GKLDDLVEGDMEAMNDIK 408
+R G D++V + +M D K
Sbjct: 216 IFRTLGTPDEVVWPGVTSMPDYK 238
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 130/297 (43%), Gaps = 42/297 (14%)
Query: 173 GRGSFGIVYK----GVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVR 228
GRG+FG V + G+ +T T AV + K + ++I HH N+V
Sbjct: 36 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 95
Query: 229 LLGFCDE-GQNRLLVYEFLNNGTLASFLFGN--------------LKPSWNLRTNI--AF 271
LLG C + G +++ EF G L+++L K L I +F
Sbjct: 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 155
Query: 272 QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRG 331
Q+A+G+ +L S + IH D+ +NILL + +I DFGLA+ + + K R
Sbjct: 156 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 212
Query: 332 TKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYR 389
++APE T + DV+SFGVLL EI S S +++ EE+ C R
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------CRR 263
Query: 390 NGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEVDV 446
L EG D E + + C +PS RPT ++ + L +++ +
Sbjct: 264 ------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 9/201 (4%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
GRG FG V+ ++ T + K + G + E ++ + H + +V L
Sbjct: 194 GRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYA 253
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFG--NLKPSWNLRTNIAF--QIARGLLYLHEDCSSQI 288
+ + LV +N G + ++ P + I + QI GL +LH+ I
Sbjct: 254 FETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNI 310
Query: 289 IHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITA 348
I+ D+KP+N+LLDD N RISD GLA L Q+KT A GT G++APE
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA--GTPGFMAPELLLGEEYDF 368
Query: 349 KVDVYSFGVLLLEIISCRKSF 369
VD ++ GV L E+I+ R F
Sbjct: 369 SVDYFALGVTLYEMIAARGPF 389
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 103/207 (49%), Gaps = 20/207 (9%)
Query: 173 GRGSFGIVYKGVIE--TTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRL 229
G G+FG VY+G + S VAVK L V + E +F E ++I + +H+N+VR
Sbjct: 39 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 98
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--------QIARGLLYLH 281
+G + R ++ E + G L SFL +P + +++A IA G YL
Sbjct: 99 IGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 282 EDCSSQIIHCDIKPQNILLD---DHYNARISDFGLAK-LLTLNQSKTIKTAIRGTKGYVA 337
E+ IH DI +N LL A+I DFG+A+ + + + A+ K ++
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMP 213
Query: 338 PEWYRKSTITAKVDVYSFGVLLLEIIS 364
PE + + T+K D +SFGVLL EI S
Sbjct: 214 PEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 103/207 (49%), Gaps = 20/207 (9%)
Query: 173 GRGSFGIVYKGVIE--TTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRL 229
G G+FG VY+G + S VAVK L V + E +F E ++I + +H+N+VR
Sbjct: 40 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRC 99
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--------QIARGLLYLH 281
+G + R ++ E + G L SFL +P + +++A IA G YL
Sbjct: 100 IGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 282 EDCSSQIIHCDIKPQNILLD---DHYNARISDFGLAK-LLTLNQSKTIKTAIRGTKGYVA 337
E+ IH DI +N LL A+I DFG+A+ + + + A+ K ++
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMP 214
Query: 338 PEWYRKSTITAKVDVYSFGVLLLEIIS 364
PE + + T+K D +SFGVLL EI S
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 123/263 (46%), Gaps = 43/263 (16%)
Query: 164 ATDNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIG 219
+ +NF+ E+ G G++G+VYK + + VA+KK LD + E+ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 58
Query: 220 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIAR 275
+ +H N+V+LL LV+EFL+ AS L G P L + FQ+ +
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 115
Query: 276 GLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGY 335
GL + H S +++H D+KPQN+L++ +++DFGLA + +R
Sbjct: 116 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYTHE 164
Query: 336 VAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFD 386
V WYR I + VD++S G + E+++ R F D E+ D F
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFR 216
Query: 387 CYRN-GKLDDLVEGDMEAMNDIK 408
+R G D++V + +M D K
Sbjct: 217 IFRTLGTPDEVVWPGVTSMPDYK 239
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 133/302 (44%), Gaps = 39/302 (12%)
Query: 159 KALEEATDNFKEEAGRGSFGIVYKGVI--ETTRTSTTAVAVKKL-DRVFQDGEKEFKNEV 215
K + + F EE G FG VYKG + T AVA+K L D+ +EF++E
Sbjct: 21 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEA 80
Query: 216 VVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL-----FGNLKPSWNLRT--- 267
++ + H N+V LLG + Q +++ + ++G L FL ++ + + RT
Sbjct: 81 MLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS 140
Query: 268 --------NIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAK-LLT 318
++ QIA G+ YL S ++H D+ +N+L+ D N +ISD GL + +
Sbjct: 141 ALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYA 197
Query: 319 LNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYA 378
+ K + ++ + ++APE + D++S+GV+L E+ S Y
Sbjct: 198 ADYYKLLGNSLLPIR-WMAPEAIMYGKFSIDSDIWSYGVVLWEVFS------------YG 244
Query: 379 ILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQML 438
+ + Y N + +++ C + + I C E PS RP + + L
Sbjct: 245 LQP---YCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL 301
Query: 439 EG 440
Sbjct: 302 RA 303
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 123/263 (46%), Gaps = 43/263 (16%)
Query: 164 ATDNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIG 219
+ +NF+ E+ G G++G+VYK + + VA+KK LD + E+ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 58
Query: 220 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIAR 275
+ +H N+V+LL LV+EFL+ AS L G P L + FQ+ +
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 115
Query: 276 GLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGY 335
GL + H S +++H D+KPQN+L++ +++DFGLA + +R
Sbjct: 116 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYXHE 164
Query: 336 VAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFD 386
V WYR I + VD++S G + E+++ R F D E+ D F
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFR 216
Query: 387 CYRN-GKLDDLVEGDMEAMNDIK 408
+R G D++V + +M D K
Sbjct: 217 IFRTLGTPDEVVWPGVTSMPDYK 239
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 103/207 (49%), Gaps = 20/207 (9%)
Query: 173 GRGSFGIVYKGVIE--TTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRL 229
G G+FG VY+G + S VAVK L V + E +F E ++I + +H+N+VR
Sbjct: 54 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 113
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--------QIARGLLYLH 281
+G + R ++ E + G L SFL +P + +++A IA G YL
Sbjct: 114 IGVSLQSLPRFILMELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 282 EDCSSQIIHCDIKPQNILLD---DHYNARISDFGLAK-LLTLNQSKTIKTAIRGTKGYVA 337
E+ IH DI +N LL A+I DFG+A+ + + + A+ K ++
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMP 228
Query: 338 PEWYRKSTITAKVDVYSFGVLLLEIIS 364
PE + + T+K D +SFGVLL EI S
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 103/207 (49%), Gaps = 20/207 (9%)
Query: 173 GRGSFGIVYKGVIE--TTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRL 229
G G+FG VY+G + S VAVK L V + E +F E ++I + +H+N+VR
Sbjct: 31 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 90
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--------QIARGLLYLH 281
+G + R ++ E + G L SFL +P + +++A IA G YL
Sbjct: 91 IGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 282 EDCSSQIIHCDIKPQNILLD---DHYNARISDFGLAK-LLTLNQSKTIKTAIRGTKGYVA 337
E+ IH DI +N LL A+I DFG+A+ + + + A+ K ++
Sbjct: 150 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMP 205
Query: 338 PEWYRKSTITAKVDVYSFGVLLLEIIS 364
PE + + T+K D +SFGVLL EI S
Sbjct: 206 PEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 122/261 (46%), Gaps = 43/261 (16%)
Query: 166 DNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIGQT 221
+NF+ E+ G G++G+VYK + + VA+KK LD + E+ ++ +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 222 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIARGL 277
+H N+V+LL LV+EFL+ AS L G P L + FQ+ +GL
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGL 116
Query: 278 LYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVA 337
+ H S +++H D+KPQN+L++ +++DFGLA + +R V
Sbjct: 117 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYTHEVV 165
Query: 338 PEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCY 388
WYR I + VD++S G + E+++ R F D E+ D F +
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIF 217
Query: 389 RN-GKLDDLVEGDMEAMNDIK 408
R G D++V + +M D K
Sbjct: 218 RTLGTPDEVVWPGVTSMPDYK 238
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 122/261 (46%), Gaps = 43/261 (16%)
Query: 166 DNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIGQT 221
+NF+ E+ G G++G+VYK + + VA+KK LD + E+ ++ +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 58
Query: 222 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIARGL 277
+H N+V+LL LV+EFL+ AS L G P L + FQ+ +GL
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGL 115
Query: 278 LYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVA 337
+ H S +++H D+KPQN+L++ +++DFGLA + +R V
Sbjct: 116 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYTHEVV 164
Query: 338 PEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCY 388
WYR I + VD++S G + E+++ R F D E+ D F +
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIF 216
Query: 389 RN-GKLDDLVEGDMEAMNDIK 408
R G D++V + +M D K
Sbjct: 217 RTLGTPDEVVWPGVTSMPDYK 237
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 122/261 (46%), Gaps = 43/261 (16%)
Query: 166 DNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIGQT 221
+NF+ E+ G G++G+VYK + + VA+KK LD + E+ ++ +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 58
Query: 222 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIARGL 277
+H N+V+LL LV+EFL+ AS L G P L + FQ+ +GL
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGL 115
Query: 278 LYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVA 337
+ H S +++H D+KPQN+L++ +++DFGLA + +R V
Sbjct: 116 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYXHEVV 164
Query: 338 PEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCY 388
WYR I + VD++S G + E+++ R F D E+ D F +
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIF 216
Query: 389 RN-GKLDDLVEGDMEAMNDIK 408
R G D++V + +M D K
Sbjct: 217 RTLGTPDEVVWPGVTSMPDYK 237
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 122/261 (46%), Gaps = 43/261 (16%)
Query: 166 DNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIGQT 221
+NF+ E+ G G++G+VYK + + VA+KK LD + E+ ++ +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 58
Query: 222 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIARGL 277
+H N+V+LL LV+EFL+ AS L G P L + FQ+ +GL
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGL 115
Query: 278 LYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVA 337
+ H S +++H D+KPQN+L++ +++DFGLA + +R V
Sbjct: 116 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYXHEVV 164
Query: 338 PEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCY 388
WYR I + VD++S G + E+++ R F D E+ D F +
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIF 216
Query: 389 RN-GKLDDLVEGDMEAMNDIK 408
R G D++V + +M D K
Sbjct: 217 RTLGTPDEVVWPGVTSMPDYK 237
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 123/263 (46%), Gaps = 43/263 (16%)
Query: 164 ATDNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIG 219
+ +NF+ E+ G G++G+VYK + + VA+KK LD + E+ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 220 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIAR 275
+ +H N+V+LL LV+EFL+ AS L G P L + FQ+ +
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 114
Query: 276 GLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGY 335
GL + H S +++H D+KPQN+L++ +++DFGLA + +R
Sbjct: 115 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYXHE 163
Query: 336 VAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFD 386
V WYR I + VD++S G + E+++ R F D E+ D F
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFR 215
Query: 387 CYRN-GKLDDLVEGDMEAMNDIK 408
+R G D++V + +M D K
Sbjct: 216 IFRTLGTPDEVVWPGVTSMPDYK 238
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 130/297 (43%), Gaps = 42/297 (14%)
Query: 173 GRGSFGIVYK----GVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVR 228
GRG+FG V + G+ +T T AV + K + ++I HH N+V
Sbjct: 73 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 132
Query: 229 LLGFCDE-GQNRLLVYEFLNNGTLASFLFGN--------------LKPSWNLRTNI--AF 271
LLG C + G +++ EF G L+++L K L I +F
Sbjct: 133 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 192
Query: 272 QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRG 331
Q+A+G+ +L S + IH D+ +NILL + +I DFGLA+ + + K R
Sbjct: 193 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 249
Query: 332 TKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYR 389
++APE T + DV+SFGVLL EI S S +++ EE+ C R
Sbjct: 250 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------CRR 300
Query: 390 NGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEVDV 446
L EG D E + + C +PS RPT ++ + L +++ +
Sbjct: 301 ------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 350
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 9/201 (4%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
GRG FG V+ ++ T + K + G + E ++ + H + +V L
Sbjct: 194 GRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYA 253
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFG--NLKPSWNLRTNIAF--QIARGLLYLHEDCSSQI 288
+ + LV +N G + ++ P + I + QI GL +LH+ I
Sbjct: 254 FETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNI 310
Query: 289 IHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITA 348
I+ D+KP+N+LLDD N RISD GLA L Q+KT A GT G++APE
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA--GTPGFMAPELLLGEEYDF 368
Query: 349 KVDVYSFGVLLLEIISCRKSF 369
VD ++ GV L E+I+ R F
Sbjct: 369 SVDYFALGVTLYEMIAARGPF 389
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 122/261 (46%), Gaps = 43/261 (16%)
Query: 166 DNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIGQT 221
+NF+ E+ G G++G+VYK + + VA+KK LD + E+ ++ +
Sbjct: 4 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 222 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIARGL 277
+H N+V+LL LV+EFL+ AS L G P L + FQ+ +GL
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGL 117
Query: 278 LYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVA 337
+ H S +++H D+KPQN+L++ +++DFGLA + +R V
Sbjct: 118 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYXHEVV 166
Query: 338 PEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCY 388
WYR I + VD++S G + E+++ R F D E+ D F +
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIF 218
Query: 389 RN-GKLDDLVEGDMEAMNDIK 408
R G D++V + +M D K
Sbjct: 219 RTLGTPDEVVWPGVTSMPDYK 239
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 130/297 (43%), Gaps = 42/297 (14%)
Query: 173 GRGSFGIVYK----GVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVR 228
GRG+FG V + G+ +T T AV + K + ++I HH N+V
Sbjct: 27 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 86
Query: 229 LLGFCDE-GQNRLLVYEFLNNGTLASFLFGN--------------LKPSWNLRTNI--AF 271
LLG C + G +++ EF G L+++L K L I +F
Sbjct: 87 LLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 146
Query: 272 QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRG 331
Q+A+G+ +L S + IH D+ +NILL + +I DFGLA+ + + K R
Sbjct: 147 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 203
Query: 332 TKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYR 389
++APE T + DV+SFGVLL EI S S +++ EE+ C R
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------CRR 254
Query: 390 NGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEVDV 446
L EG D E + + C +PS RPT ++ + L +++ +
Sbjct: 255 ------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 304
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 9/201 (4%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
GRG FG V+ ++ T + K + G + E ++ + H + +V L
Sbjct: 194 GRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYA 253
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFG--NLKPSWNLRTNIAF--QIARGLLYLHEDCSSQI 288
+ + LV +N G + ++ P + I + QI GL +LH+ I
Sbjct: 254 FETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNI 310
Query: 289 IHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITA 348
I+ D+KP+N+LLDD N RISD GLA L Q+KT A GT G++APE
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA--GTPGFMAPELLLGEEYDF 368
Query: 349 KVDVYSFGVLLLEIISCRKSF 369
VD ++ GV L E+I+ R F
Sbjct: 369 SVDYFALGVTLYEMIAARGPF 389
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 130/297 (43%), Gaps = 42/297 (14%)
Query: 173 GRGSFGIVYK----GVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVR 228
GRG+FG V + G+ +T T AV + K + ++I HH N+V
Sbjct: 27 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 86
Query: 229 LLGFCDE-GQNRLLVYEFLNNGTLASFLFGN--------------LKPSWNLRTNI--AF 271
LLG C + G +++ EF G L+++L K L I +F
Sbjct: 87 LLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 146
Query: 272 QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRG 331
Q+A+G+ +L S + IH D+ +NILL + +I DFGLA+ + + K R
Sbjct: 147 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 203
Query: 332 TKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYR 389
++APE T + DV+SFGVLL EI S S +++ EE+ C R
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------CRR 254
Query: 390 NGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEVDV 446
L EG D E + + C +PS RPT ++ + L +++ +
Sbjct: 255 ------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 304
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 122/261 (46%), Gaps = 43/261 (16%)
Query: 166 DNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIGQT 221
+NF+ E+ G G++G+VYK + + VA+KK LD + E+ ++ +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 222 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIARGL 277
+H N+V+LL LV+EFL+ AS L G P L + FQ+ +GL
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGL 116
Query: 278 LYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVA 337
+ H S +++H D+KPQN+L++ +++DFGLA + +R V
Sbjct: 117 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYTHEVV 165
Query: 338 PEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCY 388
WYR I + VD++S G + E+++ R F D E+ D F +
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIF 217
Query: 389 RN-GKLDDLVEGDMEAMNDIK 408
R G D++V + +M D K
Sbjct: 218 RTLGTPDEVVWPGVTSMPDYK 238
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 9/191 (4%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G GS GIV I T + + VAVKK+D Q + NEVV++ HH N+V +
Sbjct: 54 GEGSTGIV---CIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSS 110
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCD 292
G +V EFL G L + + T + + R L YLH + +IH D
Sbjct: 111 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAT-VCLSVLRALSYLH---NQGVIHRD 166
Query: 293 IKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDV 352
IK +ILL ++SDFG ++ K + + GT ++APE + +VD+
Sbjct: 167 IKSDSILLTSDGRIKLSDFGFCAQVSKEVPK--RKXLVGTPYWMAPEVISRLPYGTEVDI 224
Query: 353 YSFGVLLLEII 363
+S G++++E+I
Sbjct: 225 WSLGIMVIEMI 235
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 122/261 (46%), Gaps = 43/261 (16%)
Query: 166 DNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIGQT 221
+NF+ E+ G G++G+VYK + + VA+KK LD + E+ ++ +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 58
Query: 222 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIARGL 277
+H N+V+LL LV+EFL+ AS L G P L + FQ+ +GL
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGL 115
Query: 278 LYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVA 337
+ H S +++H D+KPQN+L++ +++DFGLA + +R V
Sbjct: 116 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYTHEVV 164
Query: 338 PEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCY 388
WYR I + VD++S G + E+++ R F D E+ D F +
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIF 216
Query: 389 RN-GKLDDLVEGDMEAMNDIK 408
R G D++V + +M D K
Sbjct: 217 RTLGTPDEVVWPGVTSMPDYK 237
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 103/207 (49%), Gaps = 20/207 (9%)
Query: 173 GRGSFGIVYKGVIE--TTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRL 229
G G+FG VY+G + S VAVK L V + E +F E ++I + +H+N+VR
Sbjct: 56 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 115
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--------QIARGLLYLH 281
+G + R ++ E + G L SFL +P + +++A IA G YL
Sbjct: 116 IGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 282 EDCSSQIIHCDIKPQNILLD---DHYNARISDFGLAK-LLTLNQSKTIKTAIRGTKGYVA 337
E+ IH DI +N LL A+I DFG+A+ + + + A+ K ++
Sbjct: 175 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMP 230
Query: 338 PEWYRKSTITAKVDVYSFGVLLLEIIS 364
PE + + T+K D +SFGVLL EI S
Sbjct: 231 PEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 9/201 (4%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
GRG FG V+ ++ T + K + G + E ++ + H + +V L
Sbjct: 194 GRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYA 253
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFG--NLKPSWNLRTNIAF--QIARGLLYLHEDCSSQI 288
+ + LV +N G + ++ P + I + QI GL +LH+ I
Sbjct: 254 FETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNI 310
Query: 289 IHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITA 348
I+ D+KP+N+LLDD N RISD GLA L Q+KT A GT G++APE
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA--GTPGFMAPELLLGEEYDF 368
Query: 349 KVDVYSFGVLLLEIISCRKSF 369
VD ++ GV L E+I+ R F
Sbjct: 369 SVDYFALGVTLYEMIAARGPF 389
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 122/261 (46%), Gaps = 43/261 (16%)
Query: 166 DNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIGQT 221
+NF+ E+ G G++G+VYK + + VA+KK LD + E+ ++ +
Sbjct: 7 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 222 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIARGL 277
+H N+V+LL LV+EFL+ AS L G P L + FQ+ +GL
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGL 120
Query: 278 LYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVA 337
+ H S +++H D+KPQN+L++ +++DFGLA + +R V
Sbjct: 121 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYTHEVV 169
Query: 338 PEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCY 388
WYR I + VD++S G + E+++ R F D E+ D F +
Sbjct: 170 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIF 221
Query: 389 RN-GKLDDLVEGDMEAMNDIK 408
R G D++V + +M D K
Sbjct: 222 RTLGTPDEVVWPGVTSMPDYK 242
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 122/261 (46%), Gaps = 43/261 (16%)
Query: 166 DNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIGQT 221
+NF+ E+ G G++G+VYK + + VA+KK LD + E+ ++ +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 222 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIARGL 277
+H N+V+LL LV+EFL+ AS L G P L + FQ+ +GL
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGL 116
Query: 278 LYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVA 337
+ H S +++H D+KPQN+L++ +++DFGLA + +R V
Sbjct: 117 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYTHEVV 165
Query: 338 PEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCY 388
WYR I + VD++S G + E+++ R F D E+ D F +
Sbjct: 166 TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIF 217
Query: 389 RN-GKLDDLVEGDMEAMNDIK 408
R G D++V + +M D K
Sbjct: 218 RTLGTPDEVVWPGVTSMPDYK 238
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 103/207 (49%), Gaps = 20/207 (9%)
Query: 173 GRGSFGIVYKGVIE--TTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRL 229
G G+FG VY+G + S VAVK L V + E +F E ++I + +H+N+VR
Sbjct: 40 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 99
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--------QIARGLLYLH 281
+G + R ++ E + G L SFL +P + +++A IA G YL
Sbjct: 100 IGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 282 EDCSSQIIHCDIKPQNILLD---DHYNARISDFGLAK-LLTLNQSKTIKTAIRGTKGYVA 337
E+ IH DI +N LL A+I DFG+A+ + + + A+ K ++
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMP 214
Query: 338 PEWYRKSTITAKVDVYSFGVLLLEIIS 364
PE + + T+K D +SFGVLL EI S
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 102/211 (48%), Gaps = 23/211 (10%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 229
E RG FG V+K + + ++ D+ Q + E+ EV + H+N+++
Sbjct: 30 EVKARGRFGCVWKAQLLNEYVAVKIFPIQ--DK--QSWQNEY--EVYSLPGMKHENILQF 83
Query: 230 LGFCDEGQ----NRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 285
+G G + L+ F G+L+ FL N+ SWN +IA +ARGL YLHED
Sbjct: 84 IGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANV-VSWNELCHIAETMARGLAYLHEDIP 142
Query: 286 S-------QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAP 338
I H DIK +N+LL ++ A I+DFGLA +S GT+ Y+AP
Sbjct: 143 GLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAP 202
Query: 339 EWYR-----KSTITAKVDVYSFGVLLLEIIS 364
E + ++D+Y+ G++L E+ S
Sbjct: 203 EVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 103/207 (49%), Gaps = 20/207 (9%)
Query: 173 GRGSFGIVYKGVIE--TTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRL 229
G G+FG VY+G + S VAVK L V + E +F E ++I + +H+N+VR
Sbjct: 46 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 105
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--------QIARGLLYLH 281
+G + R ++ E + G L SFL +P + +++A IA G YL
Sbjct: 106 IGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 282 EDCSSQIIHCDIKPQNILLD---DHYNARISDFGLAK-LLTLNQSKTIKTAIRGTKGYVA 337
E+ IH DI +N LL A+I DFG+A+ + + + A+ K ++
Sbjct: 165 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMP 220
Query: 338 PEWYRKSTITAKVDVYSFGVLLLEIIS 364
PE + + T+K D +SFGVLL EI S
Sbjct: 221 PEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 20/207 (9%)
Query: 173 GRGSFGIVYKGVIE--TTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRL 229
G G+FG VY+G + S VAVK L V + E +F E ++I + +H+N+VR
Sbjct: 80 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 139
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--------QIARGLLYLH 281
+G + R ++ E + G L SFL +P + +++A IA G YL
Sbjct: 140 IGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 282 EDCSSQIIHCDIKPQNILLD---DHYNARISDFGLAK-LLTLNQSKTIKTAIRGTKGYVA 337
E+ IH DI +N LL A+I DFG+A+ + + A+ K ++
Sbjct: 199 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK-WMP 254
Query: 338 PEWYRKSTITAKVDVYSFGVLLLEIIS 364
PE + + T+K D +SFGVLL EI S
Sbjct: 255 PEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 20/207 (9%)
Query: 173 GRGSFGIVYKGVIE--TTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRL 229
G G+FG VY+G + S VAVK L V + E +F E ++I + +H+N+VR
Sbjct: 57 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 116
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--------QIARGLLYLH 281
+G + R ++ E + G L SFL +P + +++A IA G YL
Sbjct: 117 IGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 282 EDCSSQIIHCDIKPQNILLD---DHYNARISDFGLAK-LLTLNQSKTIKTAIRGTKGYVA 337
E+ IH DI +N LL A+I DFG+A+ + + A+ K ++
Sbjct: 176 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK-WMP 231
Query: 338 PEWYRKSTITAKVDVYSFGVLLLEIIS 364
PE + + T+K D +SFGVLL EI S
Sbjct: 232 PEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 122/261 (46%), Gaps = 43/261 (16%)
Query: 166 DNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIGQT 221
+NF+ E+ G G++G+VYK + + VA+KK LD + E+ ++ +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 222 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIARGL 277
+H N+V+LL LV+EFL+ AS L G P L + FQ+ +GL
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGL 116
Query: 278 LYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVA 337
+ H S +++H D+KPQN+L++ +++DFGLA + +R V
Sbjct: 117 SFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYTHEVV 165
Query: 338 PEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCY 388
WYR I + VD++S G + E+++ R F D E+ D F +
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIF 217
Query: 389 RN-GKLDDLVEGDMEAMNDIK 408
R G D++V + +M D K
Sbjct: 218 RTLGTPDEVVWPGVTSMPDYK 238
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 124/263 (47%), Gaps = 43/263 (16%)
Query: 164 ATDNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIG 219
+ +NF+ E+ G G++G+VYK + + VA+KK LD + E+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 220 QTHHKNLVRLLGFCDEGQNRLLVYEFLN----NGTLASFLFGNLKPSWNLRTNIAFQIAR 275
+ +H N+V+LL LV+EFL+ + AS L G P L + FQ+ +
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLP---LIKSYLFQLLQ 117
Query: 276 GLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGY 335
GL + H S +++H D+KPQN+L++ +++DFGLA + +R
Sbjct: 118 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYXHE 166
Query: 336 VAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFD 386
V WYR I + VD++S G + E+++ R F D E+ D F
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFR 218
Query: 387 CYRN-GKLDDLVEGDMEAMNDIK 408
+R G D++V + +M D K
Sbjct: 219 IFRTLGTPDEVVWPGVTSMPDYK 241
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 124/263 (47%), Gaps = 43/263 (16%)
Query: 164 ATDNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIG 219
+ +NF+ E+ G G++G+VYK + + VA+KK LD + E+ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 59
Query: 220 QTHHKNLVRLLGFCDEGQNRLLVYEFLN----NGTLASFLFGNLKPSWNLRTNIAFQIAR 275
+ +H N+V+LL LV+EFL+ + AS L G P L + FQ+ +
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLP---LIKSYLFQLLQ 116
Query: 276 GLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGY 335
GL + H S +++H D+KPQN+L++ +++DFGLA + +R
Sbjct: 117 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYXHE 165
Query: 336 VAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFD 386
V WYR I + VD++S G + E+++ R F D E+ D F
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFR 217
Query: 387 CYRN-GKLDDLVEGDMEAMNDIK 408
+R G D++V + +M D K
Sbjct: 218 IFRTLGTPDEVVWPGVTSMPDYK 240
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 103/207 (49%), Gaps = 20/207 (9%)
Query: 173 GRGSFGIVYKGVIE--TTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRL 229
G G+FG VY+G + S VAVK L V + E +F E ++I + +H+N+VR
Sbjct: 40 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 99
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--------QIARGLLYLH 281
+G + R ++ E + G L SFL +P + +++A IA G YL
Sbjct: 100 IGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 282 EDCSSQIIHCDIKPQNILLD---DHYNARISDFGLAK-LLTLNQSKTIKTAIRGTKGYVA 337
E+ IH DI +N LL A+I DFG+A+ + + + A+ K ++
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVK-WMP 214
Query: 338 PEWYRKSTITAKVDVYSFGVLLLEIIS 364
PE + + T+K D +SFGVLL EI S
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 103/197 (52%), Gaps = 16/197 (8%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVR 228
E+ G+GSFG V+KG+ T+ VA+K +D +D ++ + E+ V+ Q + +
Sbjct: 33 EKIGKGSFGEVFKGIDNRTQK---VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTK 89
Query: 229 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHEDCS 285
G + ++ E+L G+ L +P T IA +I +GL YLH S
Sbjct: 90 YYGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLH---S 142
Query: 286 SQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKST 345
+ IH DIK N+LL +H +++DFG+A LT Q K + GT ++APE ++S
Sbjct: 143 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK--RNTFVGTPFWMAPEVIKQSA 200
Query: 346 ITAKVDVYSFGVLLLEI 362
+K D++S G+ +E+
Sbjct: 201 YDSKADIWSLGITAIEL 217
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 129/296 (43%), Gaps = 44/296 (14%)
Query: 168 FKEEAGRGSFGIVYKGVIETTRTSTTA----VAVKKLDRVFQDGEKEFKNEVVVIGQTHH 223
K E G G+FG V+ + E S T VAVK L K+F+ E ++ H
Sbjct: 19 LKRELGEGAFGKVF--LAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQH 76
Query: 224 KNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF------------------GNLKPSWNL 265
+++V+ G C +G ++V+E++ +G L FL G L S L
Sbjct: 77 EHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQML 136
Query: 266 RTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTI 325
+IA QIA G++YL S +H D+ +N L+ + +I DFG+++ + +
Sbjct: 137 --HIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRV 191
Query: 326 KTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAF 385
++ PE T + DV+SFGV+L EI + K ++ I
Sbjct: 192 GGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVI------ 245
Query: 386 DCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGV 441
+C G++ + C +++ V + C Q +P R ++++ ++L +
Sbjct: 246 ECITQGRVLE---------RPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILHAL 292
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 103/207 (49%), Gaps = 20/207 (9%)
Query: 173 GRGSFGIVYKGVIE--TTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRL 229
G G+FG VY+G + S VAVK L V + E +F E ++I + +H+N+VR
Sbjct: 66 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 125
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--------QIARGLLYLH 281
+G + R ++ E + G L SFL +P + +++A IA G YL
Sbjct: 126 IGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 282 EDCSSQIIHCDIKPQNILLD---DHYNARISDFGLAK-LLTLNQSKTIKTAIRGTKGYVA 337
E+ IH DI +N LL A+I DFG+A+ + + + A+ K ++
Sbjct: 185 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMP 240
Query: 338 PEWYRKSTITAKVDVYSFGVLLLEIIS 364
PE + + T+K D +SFGVLL EI S
Sbjct: 241 PEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 133/290 (45%), Gaps = 25/290 (8%)
Query: 159 KALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 217
K ++ + ++ G G FG V G ++ VA+K L + D ++ +F +E +
Sbjct: 3 KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASI 62
Query: 218 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIARG 276
+GQ H N++ L G + + +++ E++ NG+L +FL N ++ + I G
Sbjct: 63 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSG 122
Query: 277 LLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK--- 333
+ YL + +H D+ +NIL++ + ++SDFG++++L + T RG K
Sbjct: 123 MKYLSD---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT--RGGKIPI 177
Query: 334 GYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKL 393
+ APE T+ DV+S+G+++ E++S Y W N +
Sbjct: 178 RWTAPEAIAYRKFTSASDVWSYGIVMWEVMS------------YGERPYWDMS---NQDV 222
Query: 394 DDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVE 443
+E + C L + + C Q++ S RP ++ ML+ ++
Sbjct: 223 IKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIR 272
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 108/209 (51%), Gaps = 8/209 (3%)
Query: 161 LEEATDNFKEEAGRGSFGIVYKGVIETTRTST-TAVAVKKLDRVFQDGEKEFKNEVVVIG 219
EE F ++ G+G+FG V + + +T VAVKKL ++ ++F+ E+ ++
Sbjct: 8 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 67
Query: 220 QTHHKNLVRLLGFCDEG--QNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIARG 276
H N+V+ G C +N L+ E+L G+L +L + + +++ QI +G
Sbjct: 68 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 127
Query: 277 LLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQS-KTIKTAIRGTKGY 335
+ YL + + IH ++ +NIL+++ +I DFGL K+L ++ +K +
Sbjct: 128 MEYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFW 184
Query: 336 VAPEWYRKSTITAKVDVYSFGVLLLEIIS 364
APE +S + DV+SFGV+L E+ +
Sbjct: 185 YAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 136/299 (45%), Gaps = 36/299 (12%)
Query: 154 RCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK-EFK 212
R F+ + +E + + ++ G G G V G + VA+K L + + ++ +F
Sbjct: 40 RSFT-REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFL 98
Query: 213 NEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLR 266
+E ++GQ H N++RL G G+ ++V E++ NG+L +FL F ++ LR
Sbjct: 99 SEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLR 158
Query: 267 TNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIK 326
+ G+ YL + +H D+ +N+L+D + ++SDFGL+++L +
Sbjct: 159 G-----VGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXT 210
Query: 327 TAIRGTK---GYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDW 383
T G K + APE T ++ DV+SFGV++ E+++ Y W
Sbjct: 211 TT--GGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA------------YGERPYW 256
Query: 384 AFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
N + VE + C L + + C +D + RP ++ +L+ ++
Sbjct: 257 NMT---NRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALI 312
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 133/289 (46%), Gaps = 25/289 (8%)
Query: 159 KALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 217
K ++ + ++ G G FG V G ++ VA+K L + D ++ +F +E +
Sbjct: 9 KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASI 68
Query: 218 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIARG 276
+GQ H N++ L G + + +++ E++ NG+L +FL N ++ + I G
Sbjct: 69 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSG 128
Query: 277 LLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK--- 333
+ YL + +H D+ +NIL++ + ++SDFG++++L + T RG K
Sbjct: 129 MKYLSD---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT--RGGKIPI 183
Query: 334 GYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKL 393
+ APE T+ DV+S+G+++ E++S Y W N +
Sbjct: 184 RWTAPEAIAYRKFTSASDVWSYGIVMWEVMS------------YGERPYWDMS---NQDV 228
Query: 394 DDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
+E + C L + + C Q++ S RP ++ ML+ ++
Sbjct: 229 IKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLI 277
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 103/197 (52%), Gaps = 16/197 (8%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVR 228
E+ G+GSFG V+KG+ T+ VA+K +D +D ++ + E+ V+ Q + +
Sbjct: 28 EKIGKGSFGEVFKGIDNRTQK---VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTK 84
Query: 229 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHEDCS 285
G + ++ E+L G+ L +P T IA +I +GL YLH S
Sbjct: 85 YYGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLH---S 137
Query: 286 SQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKST 345
+ IH DIK N+LL +H +++DFG+A LT Q K + GT ++APE ++S
Sbjct: 138 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK--RNXFVGTPFWMAPEVIKQSA 195
Query: 346 ITAKVDVYSFGVLLLEI 362
+K D++S G+ +E+
Sbjct: 196 YDSKADIWSLGITAIEL 212
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 103/197 (52%), Gaps = 16/197 (8%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVR 228
E+ G+GSFG V+KG+ T+ VA+K +D +D ++ + E+ V+ Q + +
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQK---VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTK 69
Query: 229 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHEDCS 285
G + ++ E+L G+ L +P T IA +I +GL YLH S
Sbjct: 70 YYGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLH---S 122
Query: 286 SQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKST 345
+ IH DIK N+LL +H +++DFG+A LT Q K + GT ++APE ++S
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK--RNTFVGTPFWMAPEVIKQSA 180
Query: 346 ITAKVDVYSFGVLLLEI 362
+K D++S G+ +E+
Sbjct: 181 YDSKADIWSLGITAIEL 197
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 136/299 (45%), Gaps = 36/299 (12%)
Query: 154 RCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK-EFK 212
R F+ + +E + + ++ G G G V G + VA+K L + + ++ +F
Sbjct: 40 RSFT-REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFL 98
Query: 213 NEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLR 266
+E ++GQ H N++RL G G+ ++V E++ NG+L +FL F ++ LR
Sbjct: 99 SEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLR 158
Query: 267 TNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIK 326
+ G+ YL + +H D+ +N+L+D + ++SDFGL+++L +
Sbjct: 159 G-----VGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYT 210
Query: 327 TAIRGTK---GYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDW 383
T G K + APE T ++ DV+SFGV++ E+++ Y W
Sbjct: 211 TT--GGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA------------YGERPYW 256
Query: 384 AFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
N + VE + C L + + C +D + RP ++ +L+ ++
Sbjct: 257 NMT---NRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALI 312
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 123/263 (46%), Gaps = 43/263 (16%)
Query: 164 ATDNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIG 219
+ +NF+ E+ G G++G+VYK + + VA+KK LD + E+ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 59
Query: 220 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIAR 275
+ +H N+V+LL LV+EFL+ AS L G P L + FQ+ +
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 116
Query: 276 GLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGY 335
GL + H S +++H D+KP+N+L++ +++DFGLA + +R
Sbjct: 117 GLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLA--------RAFGVPVRTYXHE 165
Query: 336 VAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFD 386
V WYR I + VD++S G + E+++ R F D E+ D F
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFR 217
Query: 387 CYRN-GKLDDLVEGDMEAMNDIK 408
+R G D++V + +M D K
Sbjct: 218 IFRTLGTPDEVVWPGVTSMPDYK 240
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 103/197 (52%), Gaps = 16/197 (8%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVR 228
E+ G+GSFG V+KG+ T+ VA+K +D +D ++ + E+ V+ Q + +
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQK---VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTK 69
Query: 229 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHEDCS 285
G + ++ E+L G+ L +P T IA +I +GL YLH S
Sbjct: 70 YYGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLH---S 122
Query: 286 SQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKST 345
+ IH DIK N+LL +H +++DFG+A LT Q K + GT ++APE ++S
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK--RNXFVGTPFWMAPEVIKQSA 180
Query: 346 ITAKVDVYSFGVLLLEI 362
+K D++S G+ +E+
Sbjct: 181 YDSKADIWSLGITAIEL 197
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 123/263 (46%), Gaps = 43/263 (16%)
Query: 164 ATDNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIG 219
+ +NF+ E+ G G++G+VYK + + VA+KK LD + E+ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 58
Query: 220 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIAR 275
+ +H N+V+LL LV+EFL+ AS L G P L + FQ+ +
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 115
Query: 276 GLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGY 335
GL + H S +++H D+KP+N+L++ +++DFGLA + +R
Sbjct: 116 GLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLA--------RAFGVPVRTYXHE 164
Query: 336 VAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFD 386
V WYR I + VD++S G + E+++ R F D E+ D F
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFR 216
Query: 387 CYRN-GKLDDLVEGDMEAMNDIK 408
+R G D++V + +M D K
Sbjct: 217 IFRTLGTPDEVVWPGVTSMPDYK 239
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 123/263 (46%), Gaps = 43/263 (16%)
Query: 164 ATDNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIG 219
+ +NF+ E+ G G++G+VYK + + VA+KK LD + E+ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 220 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIAR 275
+ +H N+V+LL LV+EFL+ AS L G P L + FQ+ +
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLP---LIKSYLFQLLQ 114
Query: 276 GLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGY 335
GL + H S +++H D+KP+N+L++ +++DFGLA + +R
Sbjct: 115 GLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLA--------RAFGVPVRTYXHE 163
Query: 336 VAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFD 386
V WYR I + VD++S G + E+++ R F D E+ D F
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFR 215
Query: 387 CYRN-GKLDDLVEGDMEAMNDIK 408
+R G D++V + +M D K
Sbjct: 216 IFRTLGTPDEVVWPGVTSMPDYK 238
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 101/201 (50%), Gaps = 16/201 (7%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK--EFKNEVVVIGQTHHKNLV 227
+ G GSFG VYKG VAVK L+ ++ FKNEV V+ +T H N++
Sbjct: 18 QRIGSGSFGTVYKGKWHGD------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 71
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSS 286
+G+ + Q +V ++ +L L + K +IA Q ARG+ YLH +
Sbjct: 72 LFMGYSTKPQ-LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AK 127
Query: 287 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR---K 343
IIH D+K NI L + +I DFGLA + + + G+ ++APE R
Sbjct: 128 SIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 187
Query: 344 STITAKVDVYSFGVLLLEIIS 364
+ + + DVY+FG++L E+++
Sbjct: 188 NPYSFQSDVYAFGIVLYELMT 208
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 120/259 (46%), Gaps = 39/259 (15%)
Query: 166 DNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHH 223
+NF+ E+ G G++G+VYK + T A+ +LD + E+ ++ + +H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALXKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 224 KNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIARGLLY 279
N+V+LL LV+EFL+ AS L G P L + FQ+ +GL +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAF 118
Query: 280 LHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPE 339
H S +++H D+KPQN+L++ +++DFGLA + +R V
Sbjct: 119 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYTHEVVTL 167
Query: 340 WYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRN 390
WYR I + VD++S G + E+++ R F D E+ D F +R
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIFRT 219
Query: 391 -GKLDDLVEGDMEAMNDIK 408
G D++V + +M D K
Sbjct: 220 LGTPDEVVWPGVTSMPDYK 238
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 120/259 (46%), Gaps = 39/259 (15%)
Query: 166 DNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHH 223
+NF+ E+ G G++G+VYK + T A+ +LD + E+ ++ + +H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALXKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 224 KNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIARGLLY 279
N+V+LL LV+EFL+ AS L G P L + FQ+ +GL +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAF 117
Query: 280 LHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPE 339
H S +++H D+KPQN+L++ +++DFGLA + +R V
Sbjct: 118 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYTHEVVTL 166
Query: 340 WYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRN 390
WYR I + VD++S G + E+++ R F D E+ D F +R
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIFRT 218
Query: 391 -GKLDDLVEGDMEAMNDIK 408
G D++V + +M D K
Sbjct: 219 LGTPDEVVWPGVTSMPDYK 237
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 86/160 (53%), Gaps = 9/160 (5%)
Query: 210 EFKNEVVVIGQTHHKNLVRLLGFCDE--GQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT 267
+ K E+ ++ +H+N+V+ G C E G L+ EFL +G+L +L N K NL+
Sbjct: 69 DLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN-KNKINLKQ 127
Query: 268 NI--AFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLL-TLNQSKT 324
+ A QI +G+ YL S Q +H D+ +N+L++ + +I DFGL K + T + T
Sbjct: 128 QLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXT 184
Query: 325 IKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIIS 364
+K + APE +S DV+SFGV L E+++
Sbjct: 185 VKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 128/297 (43%), Gaps = 50/297 (16%)
Query: 173 GRGSFGIVYK----GVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVV------VIGQTH 222
G G+FG V G+ + T VAVK L EK+ + + +IG+
Sbjct: 37 GEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS--DATEKDLSDLISEMEMMKMIGK-- 92
Query: 223 HKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP----SWNLRTNI--------- 269
HKN++ LLG C + ++ E+ + G L +L P S+N N
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 270 ---AFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIK 326
A+Q+ARG+ YL S + IH D+ +N+L+ + +I+DFGLA+ +
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKT 209
Query: 327 TAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAF 385
T R ++APE T + DV+SFGVLL EI + G Y + + F
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG-------GSPYPGVPVEELF 262
Query: 386 DCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
+ G D C +L M+ C PS RPT +++ + L+ +V
Sbjct: 263 KLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 310
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 100/194 (51%), Gaps = 16/194 (8%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 231
G+GSFG VYKG+ T+ VA+K +D +D ++ + E+ V+ Q + R G
Sbjct: 28 GKGSFGEVYKGIDNHTKE---VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFG 84
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHEDCSSQI 288
+ ++ E+L G+ L KP T IA +I +GL YLH S +
Sbjct: 85 SYLKSTKLWIIMEYLGGGSALDLL----KPGPLEETYIATILREILKGLDYLH---SERK 137
Query: 289 IHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITA 348
IH DIK N+LL + + +++DFG+A LT Q K + GT ++APE ++S
Sbjct: 138 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK--RNXFVGTPFWMAPEVIKQSAYDF 195
Query: 349 KVDVYSFGVLLLEI 362
K D++S G+ +E+
Sbjct: 196 KADIWSLGITAIEL 209
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 99/199 (49%), Gaps = 11/199 (5%)
Query: 173 GRGSFGIVYKGVIETTRTST-TAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKNLVRLL 230
G G FG V + +T VAVK L + K E+ ++ +H+N+V+
Sbjct: 18 GEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYK 77
Query: 231 GFCDE--GQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI--AFQIARGLLYLHEDCSS 286
G C E G L+ EFL +G+L +L N K NL+ + A QI +G+ YL S
Sbjct: 78 GICTEDGGNGIKLIMEFLPSGSLKEYLPKN-KNKINLKQQLKYAVQICKGMDYL---GSR 133
Query: 287 QIIHCDIKPQNILLDDHYNARISDFGLAKLL-TLNQSKTIKTAIRGTKGYVAPEWYRKST 345
Q +H D+ +N+L++ + +I DFGL K + T + T+K + APE +S
Sbjct: 134 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSK 193
Query: 346 ITAKVDVYSFGVLLLEIIS 364
DV+SFGV L E+++
Sbjct: 194 FYIASDVWSFGVTLHELLT 212
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 124/293 (42%), Gaps = 42/293 (14%)
Query: 173 GRGSFGIVYK----GVIETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQT-HHKNL 226
G G+FG V G+ + VAVK L D + + +E+ ++ HKN+
Sbjct: 44 GEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNI 103
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI----------------A 270
+ LLG C + ++ E+ + G L +L P +I
Sbjct: 104 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 163
Query: 271 FQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIR 330
+Q+ARG+ YL S + IH D+ +N+L+ ++ RI+DFGLA+ + T R
Sbjct: 164 YQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGR 220
Query: 331 GTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFDCYR 389
++APE T + DV+SFGVL+ EI + G Y I + F +
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-------GSPYPGIPVEELFKLLK 273
Query: 390 NGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
G D C +L M+ C PS RPT +++ + L+ ++
Sbjct: 274 EGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 116/225 (51%), Gaps = 33/225 (14%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQ---DGEKEFKNEVVVIGQTHHKNL 226
++ G+G++GIV+K + R + VAVKK+ FQ D ++ F+ +++ + H+N+
Sbjct: 15 KKLGKGAYGIVWKSI---DRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENI 71
Query: 227 VRLLGF--CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDC 284
V LL D ++ LV++++ A L+P + + +Q+ + + YLH
Sbjct: 72 VNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVH--KQYVVYQLIKVIKYLH--- 126
Query: 285 SSQIIHCDIKPQNILLDDHYNARISDFGLAK------------LLTLNQS-------KTI 325
S ++H D+KP NILL+ + +++DFGL++ L++N++ + I
Sbjct: 127 SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPI 186
Query: 326 KTAIRGTKGYVAPEWYRKST-ITAKVDVYSFGVLLLEIISCRKSF 369
T T+ Y APE ST T +D++S G +L EI+ + F
Sbjct: 187 LTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIF 231
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 123/263 (46%), Gaps = 43/263 (16%)
Query: 164 ATDNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIG 219
+ +NF+ E+ G G++G+VYK + + VA+KK LD + E+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 220 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIAR 275
+ +H N+V+LL LV+EFL+ AS L G P L + FQ+ +
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLP---LIKSYLFQLLQ 117
Query: 276 GLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGY 335
GL + H S +++H D+KP+N+L++ +++DFGLA + +R
Sbjct: 118 GLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLA--------RAFGVPVRTYXHE 166
Query: 336 VAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFD 386
V WYR I + VD++S G + E+++ R F D E+ D F
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFR 218
Query: 387 CYRN-GKLDDLVEGDMEAMNDIK 408
+R G D++V + +M D K
Sbjct: 219 IFRTLGTPDEVVWPGVTSMPDYK 241
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 123/263 (46%), Gaps = 43/263 (16%)
Query: 164 ATDNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIG 219
+ +NF+ E+ G G++G+VYK + + VA+KK LD + E+ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 58
Query: 220 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIAR 275
+ +H N+V+LL LV+EFL+ AS L G P L + FQ+ +
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLP---LIKSYLFQLLQ 115
Query: 276 GLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGY 335
GL + H S +++H D+KP+N+L++ +++DFGLA + +R
Sbjct: 116 GLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLA--------RAFGVPVRTYXHE 164
Query: 336 VAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFD 386
V WYR I + VD++S G + E+++ R F D E+ D F
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFR 216
Query: 387 CYRN-GKLDDLVEGDMEAMNDIK 408
+R G D++V + +M D K
Sbjct: 217 IFRTLGTPDEVVWPGVTSMPDYK 239
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 125/293 (42%), Gaps = 42/293 (14%)
Query: 173 GRGSFGIVYK----GVIETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQT-HHKNL 226
G G+FG V G+ + VAVK L D ++ + +E+ ++ HKN+
Sbjct: 44 GEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNI 103
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI----------------A 270
+ LLG C + ++ E+ + G L +L P +I
Sbjct: 104 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 163
Query: 271 FQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIR 330
+Q+ARG+ YL S + IH D+ +N+L+ ++ +I+DFGLA+ + T R
Sbjct: 164 YQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 331 GTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFDCYR 389
++APE T + DV+SFGVL+ EI + G Y I + F +
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-------GSPYPGIPVEELFKLLK 273
Query: 390 NGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
G D C +L M+ C PS RPT +++ + L+ ++
Sbjct: 274 EGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 129/299 (43%), Gaps = 50/299 (16%)
Query: 173 GRGSFGIVYK----GVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVV------VIGQTH 222
G G+FG V G+ + T VAVK L EK+ + + +IG+
Sbjct: 78 GEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS--DATEKDLSDLISEMEMMKMIGK-- 133
Query: 223 HKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP----SWNLRTNI--------- 269
HKN++ LLG C + ++ E+ + G L +L P S+N N
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 270 ---AFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIK 326
A+Q+ARG+ YL S + IH D+ +N+L+ + +I+DFGLA+ +
Sbjct: 194 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 250
Query: 327 TAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAF 385
T R ++APE T + DV+SFGVLL EI + G Y + + F
Sbjct: 251 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG-------GSPYPGVPVEELF 303
Query: 386 DCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEV 444
+ G D C +L M+ C PS RPT +++ + L+ +V +
Sbjct: 304 KLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 353
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 124/293 (42%), Gaps = 42/293 (14%)
Query: 173 GRGSFGIVYK----GVIETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQT-HHKNL 226
G G+FG V G+ + VAVK L D + + +E+ ++ HKN+
Sbjct: 44 GEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNI 103
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI----------------A 270
+ LLG C + ++ E+ + G L +L P +I
Sbjct: 104 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCT 163
Query: 271 FQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIR 330
+Q+ARG+ YL S + IH D+ +N+L+ ++ +I+DFGLA+ + T R
Sbjct: 164 YQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGR 220
Query: 331 GTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFDCYR 389
++APE T + DV+SFGVL+ EI + G Y I + F +
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-------GSPYPGIPVEELFKLLK 273
Query: 390 NGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
G D C +L M+ C PS RPT +++ + L+ ++
Sbjct: 274 EGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 124/293 (42%), Gaps = 42/293 (14%)
Query: 173 GRGSFGIVYK----GVIETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQT-HHKNL 226
G G+FG V G+ + VAVK L D + + +E+ ++ HKN+
Sbjct: 44 GEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNI 103
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI----------------A 270
+ LLG C + ++ E+ + G L +L P +I
Sbjct: 104 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 163
Query: 271 FQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIR 330
+Q+ARG+ YL S + IH D+ +N+L+ ++ +I+DFGLA+ + T R
Sbjct: 164 YQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGR 220
Query: 331 GTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFDCYR 389
++APE T + DV+SFGVL+ EI + G Y I + F +
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-------GSPYPGIPVEELFKLLK 273
Query: 390 NGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
G D C +L M+ C PS RPT +++ + L+ ++
Sbjct: 274 EGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 128/297 (43%), Gaps = 50/297 (16%)
Query: 173 GRGSFGIVYK----GVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVV------VIGQTH 222
G G+FG V G+ + T VAVK L EK+ + + +IG+
Sbjct: 37 GEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS--DATEKDLSDLISEMEMMKMIGK-- 92
Query: 223 HKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP----SWNLRTNI--------- 269
HKN++ LLG C + ++ E+ + G L +L P S+N N
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 270 ---AFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIK 326
A+Q+ARG+ YL S + IH D+ +N+L+ + +I+DFGLA+ +
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 327 TAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAF 385
T R ++APE T + DV+SFGVLL EI + G Y + + F
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG-------GSPYPGVPVEELF 262
Query: 386 DCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
+ G D C +L M+ C PS RPT +++ + L+ +V
Sbjct: 263 KLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 310
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 128/297 (43%), Gaps = 50/297 (16%)
Query: 173 GRGSFGIVYK----GVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVV------VIGQTH 222
G G+FG V G+ + T VAVK L EK+ + + +IG+
Sbjct: 29 GEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS--DATEKDLSDLISEMEMMKMIGK-- 84
Query: 223 HKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP----SWNLRTNI--------- 269
HKN++ LLG C + ++ E+ + G L +L P S+N N
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 270 ---AFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIK 326
A+Q+ARG+ YL S + IH D+ +N+L+ + +I+DFGLA+ +
Sbjct: 145 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 201
Query: 327 TAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAF 385
T R ++APE T + DV+SFGVLL EI + G Y + + F
Sbjct: 202 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG-------GSPYPGVPVEELF 254
Query: 386 DCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
+ G D C +L M+ C PS RPT +++ + L+ +V
Sbjct: 255 KLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 302
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 128/297 (43%), Gaps = 50/297 (16%)
Query: 173 GRGSFGIVYK----GVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVV------VIGQTH 222
G G+FG V G+ + T VAVK L EK+ + + +IG+
Sbjct: 30 GEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS--DATEKDLSDLISEMEMMKMIGK-- 85
Query: 223 HKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP----SWNLRTNI--------- 269
HKN++ LLG C + ++ E+ + G L +L P S+N N
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 270 ---AFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIK 326
A+Q+ARG+ YL S + IH D+ +N+L+ + +I+DFGLA+ +
Sbjct: 146 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 202
Query: 327 TAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAF 385
T R ++APE T + DV+SFGVLL EI + G Y + + F
Sbjct: 203 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG-------GSPYPGVPVEELF 255
Query: 386 DCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
+ G D C +L M+ C PS RPT +++ + L+ +V
Sbjct: 256 KLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 303
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 128/297 (43%), Gaps = 50/297 (16%)
Query: 173 GRGSFGIVYK----GVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVV------VIGQTH 222
G G+FG V G+ + T VAVK L EK+ + + +IG+
Sbjct: 26 GEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS--DATEKDLSDLISEMEMMKMIGK-- 81
Query: 223 HKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP----SWNLRTNI--------- 269
HKN++ LLG C + ++ E+ + G L +L P S+N N
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 270 ---AFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIK 326
A+Q+ARG+ YL S + IH D+ +N+L+ + +I+DFGLA+ +
Sbjct: 142 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 198
Query: 327 TAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAF 385
T R ++APE T + DV+SFGVLL EI + G Y + + F
Sbjct: 199 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG-------GSPYPGVPVEELF 251
Query: 386 DCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
+ G D C +L M+ C PS RPT +++ + L+ +V
Sbjct: 252 KLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 299
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 128/297 (43%), Gaps = 50/297 (16%)
Query: 173 GRGSFGIVYK----GVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVV------VIGQTH 222
G G+FG V G+ + T VAVK L EK+ + + +IG+
Sbjct: 37 GEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS--DATEKDLSDLISEMEMMKMIGK-- 92
Query: 223 HKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP----SWNLRTNI--------- 269
HKN++ LLG C + ++ E+ + G L +L P S+N N
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 270 ---AFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIK 326
A+Q+ARG+ YL S + IH D+ +N+L+ + +I+DFGLA+ +
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 327 TAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAF 385
T R ++APE T + DV+SFGVLL EI + G Y + + F
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG-------GSPYPGVPVEELF 262
Query: 386 DCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
+ G D C +L M+ C PS RPT +++ + L+ +V
Sbjct: 263 KLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 310
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 133/288 (46%), Gaps = 39/288 (13%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVK--KLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 230
G G FG V +G ++ ++ VAVK KLD Q +EF +E + H N++RLL
Sbjct: 43 GEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLL 102
Query: 231 GFCDEGQNR-----LLVYEFLNNGTLASF-LFGNLKPSWN---LRTNIAFQ--IARGLLY 279
G C E ++ +++ F+ G L ++ L+ L+ L+T + F IA G+ Y
Sbjct: 103 GVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEY 162
Query: 280 LHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLL----TLNQSKTIKTAIRGTKGY 335
L + +H D+ +N +L D ++DFGL+K + Q + K ++ +
Sbjct: 163 L---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVK----W 215
Query: 336 VAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDD 395
+A E T+K DV++FGV + EI + + G + + D+ +R + +D
Sbjct: 216 IAIESLADRVYTSKSDVWAFGVTMWEIAT--RGMTPYPGVQNHEMYDYLLHGHRLKQPED 273
Query: 396 LVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVE 443
C+++L + C + DP RPT + LE ++E
Sbjct: 274 -------------CLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 106/224 (47%), Gaps = 17/224 (7%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 229
EE G G+FG+V++ V + + K ++ + + KNE+ ++ Q HH L+ L
Sbjct: 57 EELGSGAFGVVHRCV---EKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINL 113
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSSQI 288
++ +L+ EFL+ G L + + K S N Q GL ++HE I
Sbjct: 114 HDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS---I 170
Query: 289 IHCDIKPQNILLDDH--YNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTI 346
+H DIKP+NI+ + + +I DFGLA L ++ + TA T + APE + +
Sbjct: 171 VHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTA---TAEFAAPEIVDREPV 227
Query: 347 TAKVDVYSFGVLLLEIISCRKSF----DIEMGEEYAILTDWAFD 386
D+++ GVL ++S F D+E + DW FD
Sbjct: 228 GFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVK-RCDWEFD 270
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 100/201 (49%), Gaps = 16/201 (7%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK--EFKNEVVVIGQTHHKNLV 227
+ G GSFG VYKG VAVK L+ ++ FKNEV V+ +T H N++
Sbjct: 30 QRIGSGSFGTVYKGKWHGD------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSS 286
+G+ + Q +V ++ +L L + K +IA Q ARG+ YLH +
Sbjct: 84 LFMGYSTKPQ-LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AK 139
Query: 287 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR---K 343
IIH D+K NI L + +I DFGLA + + G+ ++APE R
Sbjct: 140 SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 199
Query: 344 STITAKVDVYSFGVLLLEIIS 364
+ + + DVY+FG++L E+++
Sbjct: 200 NPYSFQSDVYAFGIVLYELMT 220
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 124/293 (42%), Gaps = 42/293 (14%)
Query: 173 GRGSFGIVYK----GVIETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQT-HHKNL 226
G G+FG V G+ + VAVK L D + + +E+ ++ HKN+
Sbjct: 44 GEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNI 103
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI----------------A 270
+ LLG C + ++ E+ + G L +L P +I
Sbjct: 104 IHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 163
Query: 271 FQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIR 330
+Q+ARG+ YL S + IH D+ +N+L+ ++ +I+DFGLA+ + T R
Sbjct: 164 YQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 331 GTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFDCYR 389
++APE T + DV+SFGVL+ EI + G Y I + F +
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-------GSPYPGIPVEELFKLLK 273
Query: 390 NGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
G D C +L M+ C PS RPT +++ + L+ ++
Sbjct: 274 EGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 113/241 (46%), Gaps = 18/241 (7%)
Query: 146 DGTVETNLRCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQ 205
+G E++L + Y+ E + G+G++GIVY G ++ +A+K++
Sbjct: 7 EGDCESDLLEYDYEYDENGD---RVVLGKGTYGIVYAG---RDLSNQVRIAIKEIPERDS 60
Query: 206 DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNL 265
+ E+ + HKN+V+ LG E + E + G+L++ L P +
Sbjct: 61 RYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDN 120
Query: 266 RTNIAF---QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNA-RISDFGLAKLLTLNQ 321
I F QI GL YLH++ QI+H DIK N+L++ + +ISDFG +K L
Sbjct: 121 EQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN 177
Query: 322 SKTIKTAIRGTKGYVAPEWYRKST--ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAI 379
T GT Y+APE K D++S G ++E+ + + F E+GE A
Sbjct: 178 PCT--ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF-YELGEPQAA 234
Query: 380 L 380
+
Sbjct: 235 M 235
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 15/214 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+G++GIVY G ++ +A+K++ + E+ + HKN+V+ LG
Sbjct: 17 GKGTYGIVYAG---RDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS 73
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHEDCSSQII 289
E + E + G+L++ L P + I F QI GL YLH++ QI+
Sbjct: 74 FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIV 130
Query: 290 HCDIKPQNILLDDHYNA-RISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKST--I 346
H DIK N+L++ + +ISDFG +K L T GT Y+APE K
Sbjct: 131 HRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT--ETFTGTLQYMAPEIIDKGPRGY 188
Query: 347 TAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 380
D++S G ++E+ + + F E+GE A +
Sbjct: 189 GKAADIWSLGCTIIEMATGKPPF-YELGEPQAAM 221
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 105/235 (44%), Gaps = 28/235 (11%)
Query: 142 NSPGDGTVETNLRCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVK--K 199
S G+G +++ L C + E E+ G GSFG+V +G + T +VAVK K
Sbjct: 1 GSAGEGPLQS-LTCL----IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLK 55
Query: 200 LDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL------- 251
D + Q + +F EV + H+NL+RL G ++ V E G+L
Sbjct: 56 PDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKH 114
Query: 252 -ASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISD 310
FL G L + A Q+A G+ YL S + IH D+ +N+LL +I D
Sbjct: 115 QGHFLLGTL-------SRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGD 164
Query: 311 FGLAKLLTLNQSKTIKTAIRGTK-GYVAPEWYRKSTITAKVDVYSFGVLLLEIIS 364
FGL + L N + R + APE + T + D + FGV L E+ +
Sbjct: 165 FGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 16/201 (7%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK--EFKNEVVVIGQTHHKNLV 227
+ G GSFG VYKG VAVK L+ ++ FKNEV V+ +T H N++
Sbjct: 30 QRIGSGSFGTVYKGKWHGD------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSS 286
+G+ Q +V ++ +L L + K +IA Q ARG+ YLH +
Sbjct: 84 LFMGYSTAPQ-LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AK 139
Query: 287 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR---K 343
IIH D+K NI L + +I DFGLA + + G+ ++APE R
Sbjct: 140 SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 199
Query: 344 STITAKVDVYSFGVLLLEIIS 364
+ + + DVY+FG++L E+++
Sbjct: 200 NPYSFQSDVYAFGIVLYELMT 220
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 125/295 (42%), Gaps = 46/295 (15%)
Query: 173 GRGSFGIVYK----GVIETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQT-HHKNL 226
G G+FG V G+ + VAVK L D + + +E+ ++ HKN+
Sbjct: 44 GEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNI 103
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI----------------A 270
+ LLG C + ++ E+ + G L +L P +I
Sbjct: 104 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 163
Query: 271 FQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIR 330
+Q+ARG+ YL S + IH D+ +N+L+ ++ +I+DFGLA+ +N K
Sbjct: 164 YQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKNTTN 218
Query: 331 G--TKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFDC 387
G ++APE T + DV+SFGVL+ EI + G Y I + F
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-------GSPYPGIPVEELFKL 271
Query: 388 YRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
+ G D C +L M+ C PS RPT +++ + L+ ++
Sbjct: 272 LKEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 124/293 (42%), Gaps = 42/293 (14%)
Query: 173 GRGSFGIVYK----GVIETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQT-HHKNL 226
G G+FG V G+ + VAVK L D + + +E+ ++ HKN+
Sbjct: 44 GEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNI 103
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI----------------A 270
+ LLG C + ++ E+ + G L +L P +I
Sbjct: 104 ITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 163
Query: 271 FQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIR 330
+Q+ARG+ YL S + IH D+ +N+L+ ++ +I+DFGLA+ + T R
Sbjct: 164 YQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 331 GTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFDCYR 389
++APE T + DV+SFGVL+ EI + G Y I + F +
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-------GSPYPGIPVEELFKLLK 273
Query: 390 NGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
G D C +L M+ C PS RPT +++ + L+ ++
Sbjct: 274 EGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 99/204 (48%), Gaps = 10/204 (4%)
Query: 166 DNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN 225
DNF + G GS GIV I T R+S VAVKK+D Q + NEVV++ H+N
Sbjct: 23 DNFIK-IGEGSTGIV---CIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 78
Query: 226 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 285
+V + G +V EFL G L + + + + + + + L LH +
Sbjct: 79 VVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLH---A 134
Query: 286 SQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKST 345
+IH DIK +ILL ++SDFG ++ + + + GT ++APE +
Sbjct: 135 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMAPELISRLP 192
Query: 346 ITAKVDVYSFGVLLLEIISCRKSF 369
+VD++S G++++E++ +
Sbjct: 193 YGPEVDIWSLGIMVIEMVDGEPPY 216
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 114/231 (49%), Gaps = 19/231 (8%)
Query: 165 TDNF--KEEAGRGSFGIVYKGVIETTRTSTTA--VAVKKLD-RVFQDGEKEFKNEVVVIG 219
+DN+ KEE G+G+F +V + V +TT A + KKL R FQ E+E + +
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREAR----ICR 59
Query: 220 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLY 279
+ H N+VRL E LV++ + G L + S ++ QI + Y
Sbjct: 60 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAY 119
Query: 280 LHEDCSSQIIHCDIKPQNILLDDHYNA---RISDFGLAKLLTLNQSKTIKTAIRGTKGYV 336
H S+ I+H ++KP+N+LL +++DFGLA + +N S+ GT GY+
Sbjct: 120 CH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWH-GFAGTPGYL 173
Query: 337 APEWYRKSTITAKVDVYSFGVLLLEIISCRKSF-DIEMGEEYAILTDWAFD 386
+PE +K + VD+++ GV+L ++ F D + YA + A+D
Sbjct: 174 SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 224
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 122/263 (46%), Gaps = 43/263 (16%)
Query: 164 ATDNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIG 219
+ +NF+ E+ G G++G+VYK + + VA+KK LD + E+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 220 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIAR 275
+ +H N+V+LL LV+E ++ AS L G P L + FQ+ +
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 117
Query: 276 GLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGY 335
GL + H S +++H D+KPQN+L++ +++DFGLA + +R
Sbjct: 118 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYXHE 166
Query: 336 VAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFD 386
V WYR I + VD++S G + E+++ R F D E+ D F
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFR 218
Query: 387 CYRN-GKLDDLVEGDMEAMNDIK 408
+R G D++V + +M D K
Sbjct: 219 IFRTLGTPDEVVWPGVTSMPDYK 241
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 166 DNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN 225
DNF + G GS GIV I T R+S VAVKK+D Q + NEVV++ H+N
Sbjct: 34 DNFIK-IGEGSTGIV---CIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 89
Query: 226 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 285
+V + G +V EFL G L + + + + + L LH +
Sbjct: 90 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-AAVCLAVLQALSVLH---A 145
Query: 286 SQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKST 345
+IH DIK +ILL ++SDFG ++ + + + GT ++APE +
Sbjct: 146 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMAPELISRLP 203
Query: 346 ITAKVDVYSFGVLLLEIISCRKSF 369
+VD++S G++++E++ +
Sbjct: 204 YGPEVDIWSLGIMVIEMVDGEPPY 227
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 101/200 (50%), Gaps = 9/200 (4%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 229
E+ G+G+ G VY + T VA+++++ Q ++ NE++V+ + + N+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQE---VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNY 82
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
L G +V E+L G+L + + + + + L +LH S+Q+I
Sbjct: 83 LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA-VCRECLQALEFLH---SNQVI 138
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DIK NILL + +++DFG +T QSK ++ + GT ++APE + K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPK 196
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD++S G++ +E+I +
Sbjct: 197 VDIWSLGIMAIEMIEGEPPY 216
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 117/240 (48%), Gaps = 19/240 (7%)
Query: 156 FSYKALEEATDNF--KEEAGRGSFGIVYKGVIETTRTSTTA--VAVKKLD-RVFQDGEKE 210
F A + +DN+ KEE G+G+F +V + V +TT A + KKL R FQ E+E
Sbjct: 19 FMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLERE 78
Query: 211 FKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA 270
+ + + H N+VRL E LV++ + G L + S ++
Sbjct: 79 AR----ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCI 134
Query: 271 FQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNA---RISDFGLAKLLTLNQSKTIKT 327
QI + Y H S+ I+H ++KP+N+LL +++DFGLA + +N S+
Sbjct: 135 QQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWH- 188
Query: 328 AIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSF-DIEMGEEYAILTDWAFD 386
GT GY++PE +K + VD+++ GV+L ++ F D + YA + A+D
Sbjct: 189 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 248
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 99/204 (48%), Gaps = 10/204 (4%)
Query: 166 DNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN 225
DNF + G GS GIV I T R+S VAVKK+D Q + NEVV++ H+N
Sbjct: 27 DNFIK-IGEGSTGIV---CIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 82
Query: 226 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 285
+V + G +V EFL G L + + + + + + + L LH +
Sbjct: 83 VVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLH---A 138
Query: 286 SQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKST 345
+IH DIK +ILL ++SDFG ++ + + + GT ++APE +
Sbjct: 139 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMAPELISRLP 196
Query: 346 ITAKVDVYSFGVLLLEIISCRKSF 369
+VD++S G++++E++ +
Sbjct: 197 YGPEVDIWSLGIMVIEMVDGEPPY 220
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 128/299 (42%), Gaps = 50/299 (16%)
Query: 173 GRGSFGIVYK----GVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVV------VIGQTH 222
G G+FG V G+ + T VAVK L EK+ + + +IG+
Sbjct: 37 GEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS--DATEKDLSDLISEMEMMKMIGK-- 92
Query: 223 HKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN--------LKPSWNLRTNI----- 269
HKN++ LLG C + ++ E+ + G L +L PS N +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 270 ---AFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIK 326
A+Q+ARG+ YL S + IH D+ +N+L+ + +I+DFGLA+ +
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 327 TAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAF 385
T R ++APE T + DV+SFGVLL EI + G Y + + F
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG-------GSPYPGVPVEELF 262
Query: 386 DCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEV 444
+ G D C +L M+ C PS RPT +++ + L+ +V +
Sbjct: 263 KLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 312
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 114/231 (49%), Gaps = 19/231 (8%)
Query: 165 TDNF--KEEAGRGSFGIVYKGVIETTRTSTTA--VAVKKLD-RVFQDGEKEFKNEVVVIG 219
+DN+ KEE G+G+F +V + V +TT A + KKL R FQ E+E + +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREAR----ICR 60
Query: 220 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLY 279
+ H N+VRL E LV++ + G L + S ++ QI + Y
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAY 120
Query: 280 LHEDCSSQIIHCDIKPQNILLDDHYNA---RISDFGLAKLLTLNQSKTIKTAIRGTKGYV 336
H S+ I+H ++KP+N+LL +++DFGLA + +N S+ GT GY+
Sbjct: 121 CH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWH-GFAGTPGYL 174
Query: 337 APEWYRKSTITAKVDVYSFGVLLLEIISCRKSF-DIEMGEEYAILTDWAFD 386
+PE +K + VD+++ GV+L ++ F D + YA + A+D
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 225
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 121/261 (46%), Gaps = 43/261 (16%)
Query: 166 DNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIGQT 221
+NF+ E+ G G++G+VYK + + VA+KK LD + E+ ++ +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 58
Query: 222 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIARGL 277
+H N+V+LL LV+E ++ AS L G P L + FQ+ +GL
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLP---LIKSYLFQLLQGL 115
Query: 278 LYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVA 337
+ H S +++H D+KPQN+L++ +++DFGLA + +R V
Sbjct: 116 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYTHEVV 164
Query: 338 PEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCY 388
WYR I + VD++S G + E+++ R F D E+ D F +
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIF 216
Query: 389 RN-GKLDDLVEGDMEAMNDIK 408
R G D++V + +M D K
Sbjct: 217 RTLGTPDEVVWPGVTSMPDYK 237
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 103/206 (50%), Gaps = 26/206 (12%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK--EFKNEVVVIGQTHHKNLV 227
+ G GSFG VYKG VAVK L+ ++ FKNEV V+ +T H N++
Sbjct: 19 QRIGSGSFGTVYKGKWHGD------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAFQIARGLLYLH 281
+G+ + Q +V ++ +L L F +K +IA Q A+G+ YLH
Sbjct: 73 LFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIK-----LIDIARQTAQGMDYLH 126
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
+ IIH D+K NI L + +I DFGLA + + + G+ ++APE
Sbjct: 127 ---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 183
Query: 342 R---KSTITAKVDVYSFGVLLLEIIS 364
R K+ + + DVY+FG++L E+++
Sbjct: 184 RMQDKNPYSFQSDVYAFGIVLYELMT 209
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 32/266 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVRL 229
G+G FG VY + + S +A+K L + + E + + EV + H N++RL
Sbjct: 17 GKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
G+ + L+ E+ GT+ L K ++A L Y H S ++I
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVI 130
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DIKP+N+LL +I+DFG +++ + +T + GT Y+ PE K
Sbjct: 131 HRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 186
Query: 350 VDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIK 408
VD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL- 236
Query: 409 CVEKLLMVSIWCIQEDPSLRPTMRKV 434
+ +LL + +PS RP +R+V
Sbjct: 237 -ISRLL-------KHNPSQRPMLREV 254
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 114/231 (49%), Gaps = 19/231 (8%)
Query: 165 TDNF--KEEAGRGSFGIVYKGVIETTRTSTTA--VAVKKLD-RVFQDGEKEFKNEVVVIG 219
+DN+ KEE G+G+F +V + V +TT A + KKL R FQ E+E + +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREAR----ICR 60
Query: 220 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLY 279
+ H N+VRL E LV++ + G L + S ++ QI + Y
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAY 120
Query: 280 LHEDCSSQIIHCDIKPQNILLDDHYNA---RISDFGLAKLLTLNQSKTIKTAIRGTKGYV 336
H S+ I+H ++KP+N+LL +++DFGLA + +N S+ GT GY+
Sbjct: 121 CH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWH-GFAGTPGYL 174
Query: 337 APEWYRKSTITAKVDVYSFGVLLLEIISCRKSF-DIEMGEEYAILTDWAFD 386
+PE +K + VD+++ GV+L ++ F D + YA + A+D
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 225
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 166 DNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN 225
DNF + G GS GIV I T R+S VAVKK+D Q + NEVV++ H+N
Sbjct: 32 DNFIK-IGEGSTGIV---CIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 87
Query: 226 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 285
+V + G +V EFL G L + + + + + L LH +
Sbjct: 88 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-AAVCLAVLQALSVLH---A 143
Query: 286 SQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKST 345
+IH DIK +ILL ++SDFG ++ + + + GT ++APE +
Sbjct: 144 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMAPELISRLP 201
Query: 346 ITAKVDVYSFGVLLLEIISCRKSF 369
+VD++S G++++E++ +
Sbjct: 202 YGPEVDIWSLGIMVIEMVDGEPPY 225
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 103/206 (50%), Gaps = 26/206 (12%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK--EFKNEVVVIGQTHHKNLV 227
+ G GSFG VYKG VAVK L+ ++ FKNEV V+ +T H N++
Sbjct: 14 QRIGSGSFGTVYKGKWHGD------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAFQIARGLLYLH 281
+G+ + Q +V ++ +L L F +K +IA Q A+G+ YLH
Sbjct: 68 LFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIK-----LIDIARQTAQGMDYLH 121
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
+ IIH D+K NI L + +I DFGLA + + + G+ ++APE
Sbjct: 122 ---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 178
Query: 342 R---KSTITAKVDVYSFGVLLLEIIS 364
R K+ + + DVY+FG++L E+++
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMT 204
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 32/266 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVRL 229
G+G FG VY + + S +A+K L + + E + + EV + H N++RL
Sbjct: 43 GKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
G+ + L+ E+ GT+ L K ++A L Y H S ++I
Sbjct: 100 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVI 156
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DIKP+N+LL +I+DFG +++ + +T + GT Y+ PE K
Sbjct: 157 HRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 212
Query: 350 VDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIK 408
VD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 213 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL- 262
Query: 409 CVEKLLMVSIWCIQEDPSLRPTMRKV 434
+ +LL + +PS RP +R+V
Sbjct: 263 -ISRLL-------KHNPSQRPMLREV 280
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 105/235 (44%), Gaps = 28/235 (11%)
Query: 142 NSPGDGTVETNLRCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVK--K 199
S G+G +++ L C + E E+ G GSFG+V +G + T +VAVK K
Sbjct: 1 GSAGEGPLQS-LTCL----IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLK 55
Query: 200 LDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL------- 251
D + Q + +F EV + H+NL+RL G ++ V E G+L
Sbjct: 56 PDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKH 114
Query: 252 -ASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISD 310
FL G L + A Q+A G+ YL S + IH D+ +N+LL +I D
Sbjct: 115 QGHFLLGTL-------SRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGD 164
Query: 311 FGLAKLLTLNQSKTIKTAIRGTK-GYVAPEWYRKSTITAKVDVYSFGVLLLEIIS 364
FGL + L N + R + APE + T + D + FGV L E+ +
Sbjct: 165 FGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 32/266 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVRL 229
G+G FG VY + + S +A+K L + + E + + EV + H N++RL
Sbjct: 20 GKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
G+ + L+ E+ GT+ L K ++A L Y H S ++I
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVI 133
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DIKP+N+LL +I+DFG +++ + + A+ GT Y+ PE K
Sbjct: 134 HRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEK 189
Query: 350 VDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIK 408
VD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL- 239
Query: 409 CVEKLLMVSIWCIQEDPSLRPTMRKV 434
+ +LL + +PS RP +R+V
Sbjct: 240 -ISRLL-------KHNPSQRPMLREV 257
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 104/207 (50%), Gaps = 15/207 (7%)
Query: 158 YKALEEATD--NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG-EKEFKNE 214
+K E+ D +F++ G G+F V ++ + + VA+K + + +G E +NE
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENE 66
Query: 215 VVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIA 274
+ V+ + H N+V L + G + L+ + ++ G L + + + + FQ+
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVL 126
Query: 275 RGLLYLHEDCSSQIIHCDIKPQNIL---LDDHYNARISDFGLAKLLTLNQSKTIKTAIRG 331
+ YLH+ I+H D+KP+N+L LD+ ISDFGL+K+ ++ + G
Sbjct: 127 DAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACG 180
Query: 332 TKGYVAPEWYRKSTITAKVDVYSFGVL 358
T GYVAPE + + VD +S GV+
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 103/206 (50%), Gaps = 26/206 (12%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK--EFKNEVVVIGQTHHKNLV 227
+ G GSFG VYKG VAVK L+ ++ FKNEV V+ +T H N++
Sbjct: 19 QRIGSGSFGTVYKGKWHGD------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAFQIARGLLYLH 281
+G+ + Q +V ++ +L L F +K +IA Q A+G+ YLH
Sbjct: 73 LFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIK-----LIDIARQTAQGMDYLH 126
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
+ IIH D+K NI L + +I DFGLA + + + G+ ++APE
Sbjct: 127 ---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 183
Query: 342 R---KSTITAKVDVYSFGVLLLEIIS 364
R K+ + + DVY+FG++L E+++
Sbjct: 184 RMQDKNPYSFQSDVYAFGIVLYELMT 209
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 127/297 (42%), Gaps = 50/297 (16%)
Query: 173 GRGSFGIVYK----GVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVV------VIGQTH 222
G G+FG V G+ + T VAVK L EK+ + + +IG+
Sbjct: 22 GEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS--DATEKDLSDLISEMEMMKMIGK-- 77
Query: 223 HKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN--------LKPSWNLRTNI----- 269
HKN++ LLG C + ++ E+ + G L +L PS N +
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 270 ---AFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIK 326
A+Q+ARG+ YL S + IH D+ +N+L+ + +I+DFGLA+ +
Sbjct: 138 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 194
Query: 327 TAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAF 385
T R ++APE T + DV+SFGVLL EI + G Y + + F
Sbjct: 195 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG-------GSPYPGVPVEELF 247
Query: 386 DCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
+ G D C +L M+ C PS RPT +++ + L+ +V
Sbjct: 248 KLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 295
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 32/266 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVRL 229
G+G FG VY + + S +A+K L + + E + + EV + H N++RL
Sbjct: 17 GKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
G+ + L+ E+ GT+ L K ++A L Y H S ++I
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVI 130
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DIKP+N+LL +I+DFG +++ + +T + GT Y+ PE K
Sbjct: 131 HRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTELCGTLDYLPPEMIEGRMHDEK 186
Query: 350 VDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIK 408
VD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL- 236
Query: 409 CVEKLLMVSIWCIQEDPSLRPTMRKV 434
+ +LL + +PS RP +R+V
Sbjct: 237 -ISRLL-------KHNPSQRPMLREV 254
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 101/200 (50%), Gaps = 9/200 (4%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 229
E+ G+G+ G VY + T VA+++++ Q ++ NE++V+ + + N+V
Sbjct: 27 EKIGQGASGTVYTAMDVATGQE---VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNY 83
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
L G +V E+L G+L + + + + + L +LH S+Q+I
Sbjct: 84 LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA-VCRECLQALEFLH---SNQVI 139
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DIK NILL + +++DFG +T QSK ++ + GT ++APE + K
Sbjct: 140 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSXMVGTPYWMAPEVVTRKAYGPK 197
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD++S G++ +E+I +
Sbjct: 198 VDIWSLGIMAIEMIEGEPPY 217
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 101/200 (50%), Gaps = 9/200 (4%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 229
E+ G+G+ G VY + T VA+++++ Q ++ NE++V+ + + N+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQE---VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNY 82
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
L G +V E+L G+L + + + + + L +LH S+Q+I
Sbjct: 83 LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA-VCRECLQALEFLH---SNQVI 138
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DIK NILL + +++DFG +T QSK ++ + GT ++APE + K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSEMVGTPYWMAPEVVTRKAYGPK 196
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD++S G++ +E+I +
Sbjct: 197 VDIWSLGIMAIEMIEGEPPY 216
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 103/206 (50%), Gaps = 26/206 (12%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK--EFKNEVVVIGQTHHKNLV 227
+ G GSFG VYKG VAVK L+ ++ FKNEV V+ +T H N++
Sbjct: 16 QRIGSGSFGTVYKGKWHGD------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 69
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAFQIARGLLYLH 281
+G+ + Q +V ++ +L L F +K +IA Q A+G+ YLH
Sbjct: 70 LFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIK-----LIDIARQTAQGMDYLH 123
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
+ IIH D+K NI L + +I DFGLA + + + G+ ++APE
Sbjct: 124 ---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 180
Query: 342 R---KSTITAKVDVYSFGVLLLEIIS 364
R K+ + + DVY+FG++L E+++
Sbjct: 181 RMQDKNPYSFQSDVYAFGIVLYELMT 206
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 101/200 (50%), Gaps = 9/200 (4%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 229
E+ G+G+ G VY + T VA+++++ Q ++ NE++V+ + + N+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQE---VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNY 82
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
L G +V E+L G+L + + + + + L +LH S+Q+I
Sbjct: 83 LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA-VCRECLQALEFLH---SNQVI 138
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DIK NILL + +++DFG +T QSK ++ + GT ++APE + K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSXMVGTPYWMAPEVVTRKAYGPK 196
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD++S G++ +E+I +
Sbjct: 197 VDIWSLGIMAIEMIEGEPPY 216
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 166 DNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN 225
DNF + G GS GIV I T R+S VAVKK+D Q + NEVV++ H+N
Sbjct: 77 DNFIK-IGEGSTGIV---CIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 132
Query: 226 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 285
+V + G +V EFL G L + + + + + L LH +
Sbjct: 133 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-AAVCLAVLQALSVLH---A 188
Query: 286 SQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKST 345
+IH DIK +ILL ++SDFG ++ + + + GT ++APE +
Sbjct: 189 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMAPELISRLP 246
Query: 346 ITAKVDVYSFGVLLLEIISCRKSF 369
+VD++S G++++E++ +
Sbjct: 247 YGPEVDIWSLGIMVIEMVDGEPPY 270
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 32/266 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVRL 229
G+G FG VY + + S +A+K L + + E + + EV + H N++RL
Sbjct: 34 GKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 90
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
G+ + L+ E+ GT+ L K ++A L Y H S ++I
Sbjct: 91 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVI 147
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DIKP+N+LL +I+DFG +++ + +T + GT Y+ PE K
Sbjct: 148 HRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 203
Query: 350 VDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIK 408
VD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 204 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL- 253
Query: 409 CVEKLLMVSIWCIQEDPSLRPTMRKV 434
+ +LL + +PS RP +R+V
Sbjct: 254 -ISRLL-------KHNPSQRPMLREV 271
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 103/206 (50%), Gaps = 26/206 (12%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK--EFKNEVVVIGQTHHKNLV 227
+ G GSFG VYKG VAVK L+ ++ FKNEV V+ +T H N++
Sbjct: 41 QRIGSGSFGTVYKGKWHGD------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 94
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAFQIARGLLYLH 281
+G+ + Q +V ++ +L L F +K +IA Q A+G+ YLH
Sbjct: 95 LFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIK-----LIDIARQTAQGMDYLH 148
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
+ IIH D+K NI L + +I DFGLA + + + G+ ++APE
Sbjct: 149 ---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 205
Query: 342 R---KSTITAKVDVYSFGVLLLEIIS 364
R K+ + + DVY+FG++L E+++
Sbjct: 206 RMQDKNPYSFQSDVYAFGIVLYELMT 231
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 32/266 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVRL 229
G+G FG VY + + S +A+K L + + E + + EV + H N++RL
Sbjct: 22 GKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
G+ + L+ E+ GT+ L K ++A L Y H S ++I
Sbjct: 79 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVI 135
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DIKP+N+LL +I+DFG +++ + +T + GT Y+ PE K
Sbjct: 136 HRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 191
Query: 350 VDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIK 408
VD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL- 241
Query: 409 CVEKLLMVSIWCIQEDPSLRPTMRKV 434
+ +LL + +PS RP +R+V
Sbjct: 242 -ISRLL-------KHNPSQRPMLREV 259
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 32/266 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVRL 229
G+G FG VY + + S +A+K L + + E + + EV + H N++RL
Sbjct: 20 GKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
G+ + L+ E+ GT+ L K ++A L Y H S ++I
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVI 133
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DIKP+N+LL +I+DFG +++ + +T + GT Y+ PE K
Sbjct: 134 HRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 189
Query: 350 VDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIK 408
VD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL- 239
Query: 409 CVEKLLMVSIWCIQEDPSLRPTMRKV 434
+ +LL + +PS RP +R+V
Sbjct: 240 -ISRLL-------KHNPSQRPMLREV 257
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 32/266 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVRL 229
G+G FG VY + + S +A+K L + + E + + EV + H N++RL
Sbjct: 22 GKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
G+ + L+ E+ GT+ L K ++A L Y H S ++I
Sbjct: 79 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVI 135
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DIKP+N+LL +I+DFG +++ + +T + GT Y+ PE K
Sbjct: 136 HRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEXIEGRXHDEK 191
Query: 350 VDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIK 408
VD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL- 241
Query: 409 CVEKLLMVSIWCIQEDPSLRPTMRKV 434
+ +LL + +PS RP +R+V
Sbjct: 242 -ISRLL-------KHNPSQRPXLREV 259
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 103/206 (50%), Gaps = 26/206 (12%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK--EFKNEVVVIGQTHHKNLV 227
+ G GSFG VYKG VAVK L+ ++ FKNEV V+ +T H N++
Sbjct: 42 QRIGSGSFGTVYKGKWHGD------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAFQIARGLLYLH 281
+G+ + Q +V ++ +L L F +K +IA Q A+G+ YLH
Sbjct: 96 LFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIK-----LIDIARQTAQGMDYLH 149
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
+ IIH D+K NI L + +I DFGLA + + + G+ ++APE
Sbjct: 150 ---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 206
Query: 342 R---KSTITAKVDVYSFGVLLLEIIS 364
R K+ + + DVY+FG++L E+++
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELMT 232
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLVR 228
E RG FG V+K + VAVK QD + + + E+ H+NL++
Sbjct: 21 EIKARGRFGCVWKA-----QLMNDFVAVKIFP--LQDKQSWQSEREIFSTPGMKHENLLQ 73
Query: 229 LLGFCDEGQNR----LLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHED- 283
+ G N L+ F + G+L +L GN+ +WN ++A ++RGL YLHED
Sbjct: 74 FIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGNII-TWNELCHVAETMSRGLSYLHEDV 132
Query: 284 --CSSQ-----IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYV 336
C + I H D K +N+LL A ++DFGLA + GT+ Y+
Sbjct: 133 PWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYM 192
Query: 337 APEWYR-----KSTITAKVDVYSFGVLLLEIISCRKSFD 370
APE + ++D+Y+ G++L E++S K+ D
Sbjct: 193 APEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 102/213 (47%), Gaps = 16/213 (7%)
Query: 158 YKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK--EFKNEV 215
Y +E + G GSFG VYKG VAVK L V E+ F+NEV
Sbjct: 30 YWEIEASEVMLSTRIGSGSFGTVYKGKWHGD------VAVKILKVVDPTPEQFQAFRNEV 83
Query: 216 VVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF-GNLKPSWNLRTNIAFQIA 274
V+ +T H N++ +G+ + N +V ++ +L L K +IA Q A
Sbjct: 84 AVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTA 142
Query: 275 RGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKG 334
+G+ YLH + IIH D+K NI L + +I DFGLA + + G+
Sbjct: 143 QGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVL 199
Query: 335 YVAPEWYR---KSTITAKVDVYSFGVLLLEIIS 364
++APE R + + + DVYS+G++L E+++
Sbjct: 200 WMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMT 232
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 118/266 (44%), Gaps = 32/266 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVRL 229
G+G FG VY + + S +A+K L + + E + + EV + H N++RL
Sbjct: 18 GKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
G+ + L+ E+ GT+ L K ++A L Y H S ++I
Sbjct: 75 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVI 131
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DIKP+N+LL +I+DFG + + + +T + GT Y+ PE K
Sbjct: 132 HRDIKPENLLLGSAGELKIADFG----WSCHAPSSRRTTLSGTLDYLPPEMIEGRMHDEK 187
Query: 350 VDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIK 408
VD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 188 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL- 237
Query: 409 CVEKLLMVSIWCIQEDPSLRPTMRKV 434
+ +LL + +PS RP +R+V
Sbjct: 238 -ISRLL-------KHNPSQRPMLREV 255
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 112/222 (50%), Gaps = 17/222 (7%)
Query: 164 ATDNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK-NEVVVIGQ 220
++ FK E+ G G++ VYKG+ +T+ VA+K++ ++G E+ ++ +
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGL---NKTTGVYVALKEVKLDSEEGTPSTAIREISLMKE 59
Query: 221 THHKNLVRLLGFCDEGQNRLLVYEFLNNGT---LASFLFGNLKP--SWNLRTNIAFQIAR 275
H+N+VRL LV+EF++N + S GN NL +Q+ +
Sbjct: 60 LKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQ 119
Query: 276 GLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGY 335
GL + HE+ +I+H D+KPQN+L++ ++ DFGLA+ + + + T Y
Sbjct: 120 GLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV--TLWY 174
Query: 336 VAPEWYRKS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEE 376
AP+ S T + +D++S G +L E+I+ + F EE
Sbjct: 175 RAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE 216
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 123/293 (41%), Gaps = 42/293 (14%)
Query: 173 GRGSFGIVYK----GVIETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQT-HHKNL 226
G G FG V G+ + VAVK L D + + +E+ ++ HKN+
Sbjct: 33 GEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNI 92
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI----------------A 270
+ LLG C + ++ E+ + G L +L P +I
Sbjct: 93 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 152
Query: 271 FQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIR 330
+Q+ARG+ YL S + IH D+ +N+L+ ++ +I+DFGLA+ + T R
Sbjct: 153 YQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 209
Query: 331 GTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFDCYR 389
++APE T + DV+SFGVL+ EI + G Y I + F +
Sbjct: 210 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-------GSPYPGIPVEELFKLLK 262
Query: 390 NGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
G D C +L M+ C PS RPT +++ + L+ ++
Sbjct: 263 EGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 306
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 102/206 (49%), Gaps = 26/206 (12%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK--EFKNEVVVIGQTHHKNLV 227
+ G GSFG VYKG VAVK L+ ++ FKNEV V+ +T H N++
Sbjct: 14 QRIGSGSFGTVYKGKWHGD------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAFQIARGLLYLH 281
+G+ Q +V ++ +L L F +K +IA Q A+G+ YLH
Sbjct: 68 LFMGYSTAPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIK-----LIDIARQTAQGMDYLH 121
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
+ IIH D+K NI L + +I DFGLA + + + G+ ++APE
Sbjct: 122 ---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 178
Query: 342 R---KSTITAKVDVYSFGVLLLEIIS 364
R K+ + + DVY+FG++L E+++
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMT 204
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 123/293 (41%), Gaps = 42/293 (14%)
Query: 173 GRGSFGIVYK----GVIETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQT-HHKNL 226
G G FG V G+ + VAVK L D + + +E+ ++ HKN+
Sbjct: 36 GEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNI 95
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI----------------A 270
+ LLG C + ++ E+ + G L +L P +I
Sbjct: 96 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 155
Query: 271 FQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIR 330
+Q+ARG+ YL S + IH D+ +N+L+ ++ +I+DFGLA+ + T R
Sbjct: 156 YQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 212
Query: 331 GTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFDCYR 389
++APE T + DV+SFGVL+ EI + G Y I + F +
Sbjct: 213 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-------GSPYPGIPVEELFKLLK 265
Query: 390 NGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
G D C +L M+ C PS RPT +++ + L+ ++
Sbjct: 266 EGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 309
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 100/217 (46%), Gaps = 10/217 (4%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKE--FKNEVVVIGQTHHKNLVRLL 230
G+GSFG V+ + T A+KK D V D + E + V+ H L +
Sbjct: 27 GKGSFGKVFLAEFKKTNQFFAIKALKK-DVVLMDDDVECTMVEKRVLSLAWEHPFLTHMF 85
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIH 290
+N V E+LN G L + K + T A +I GL +LH S I++
Sbjct: 86 CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH---SKGIVY 142
Query: 291 CDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAKV 350
D+K NILLD + +I+DFG+ K L +KT GT Y+APE V
Sbjct: 143 RDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT--NEFCGTPDYIAPEILLGQKYNHSV 200
Query: 351 DVYSFGVLLLEIISCRKSFDIEMGEE--YAILTDWAF 385
D +SFGVLL E++ + F + EE ++I D F
Sbjct: 201 DWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPF 237
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 32/266 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVRL 229
G+G FG VY + + S +A+K L + + E + + EV + H N++RL
Sbjct: 21 GKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
G+ + L+ E+ GT+ L K ++A L Y H S ++I
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVI 134
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DIKP+N+LL +I+DFG +++ + +T + GT Y+ PE K
Sbjct: 135 HRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 190
Query: 350 VDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIK 408
VD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 191 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL- 240
Query: 409 CVEKLLMVSIWCIQEDPSLRPTMRKV 434
+ +LL + +PS RP +R+V
Sbjct: 241 -ISRLL-------KHNPSQRPMLREV 258
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 94/207 (45%), Gaps = 23/207 (11%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVK--KLDRVFQ-DGEKEFKNEVVVIGQTHHKNL 226
E+ G GSFG+V +G + T +VAVK K D + Q + +F EV + H+NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTL--------ASFLFGNLKPSWNLRTNIAFQIARGLL 278
+RL G ++ V E G+L FL G L + A Q+A G+
Sbjct: 74 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTL-------SRYAVQVAEGMG 125
Query: 279 YLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK-GYVA 337
YL S + IH D+ +N+LL +I DFGL + L N + R + A
Sbjct: 126 YLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCA 182
Query: 338 PEWYRKSTITAKVDVYSFGVLLLEIIS 364
PE + T + D + FGV L E+ +
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 123/293 (41%), Gaps = 42/293 (14%)
Query: 173 GRGSFGIVYK----GVIETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQT-HHKNL 226
G G FG V G+ + VAVK L D + + +E+ ++ HKN+
Sbjct: 31 GEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNI 90
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI----------------A 270
+ LLG C + ++ E+ + G L +L P +I
Sbjct: 91 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 150
Query: 271 FQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIR 330
+Q+ARG+ YL S + IH D+ +N+L+ ++ +I+DFGLA+ + T R
Sbjct: 151 YQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 207
Query: 331 GTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFDCYR 389
++APE T + DV+SFGVL+ EI + G Y I + F +
Sbjct: 208 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-------GSPYPGIPVEELFKLLK 260
Query: 390 NGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
G D C +L M+ C PS RPT +++ + L+ ++
Sbjct: 261 EGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 304
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 166 DNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN 225
DNF + G GS GIV I T R+S VAVKK+D Q + NEVV++ H+N
Sbjct: 154 DNFIK-IGEGSTGIV---CIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 209
Query: 226 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 285
+V + G +V EFL G L + + + + + L LH +
Sbjct: 210 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-AAVCLAVLQALSVLH---A 265
Query: 286 SQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKST 345
+IH DIK +ILL ++SDFG ++ + + + GT ++APE +
Sbjct: 266 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMAPELISRLP 323
Query: 346 ITAKVDVYSFGVLLLEIISCRKSF 369
+VD++S G++++E++ +
Sbjct: 324 YGPEVDIWSLGIMVIEMVDGEPPY 347
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 12/200 (6%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAV----KKLDRVFQDGEKEFKNEVVVIGQTHHKN 225
+E G G+FG V KG + + T + D +D E E V+ Q +
Sbjct: 33 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD---ELLAEANVMQQLDNPY 89
Query: 226 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 285
+VR++G C E ++ +LV E G L +L N + Q++ G+ YL E
Sbjct: 90 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE--- 145
Query: 286 SQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQS-KTIKTAIRGTKGYVAPEWYRKS 344
S +H D+ +N+LL + A+ISDFGL+K L +++ +T + + APE
Sbjct: 146 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 205
Query: 345 TITAKVDVYSFGVLLLEIIS 364
++K DV+SFGVL+ E S
Sbjct: 206 KFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 12/200 (6%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAV----KKLDRVFQDGEKEFKNEVVVIGQTHHKN 225
+E G G+FG V KG + + T + D +D E E V+ Q +
Sbjct: 33 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD---ELLAEANVMQQLDNPY 89
Query: 226 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 285
+VR++G C E ++ +LV E G L +L N + Q++ G+ YL E
Sbjct: 90 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE--- 145
Query: 286 SQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQS-KTIKTAIRGTKGYVAPEWYRKS 344
S +H D+ +N+LL + A+ISDFGL+K L +++ +T + + APE
Sbjct: 146 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 205
Query: 345 TITAKVDVYSFGVLLLEIIS 364
++K DV+SFGVL+ E S
Sbjct: 206 KFSSKSDVWSFGVLMWEAFS 225
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 104/207 (50%), Gaps = 15/207 (7%)
Query: 158 YKALEEATD--NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG-EKEFKNE 214
+K E+ D +F++ G G+F V ++ + + VA+K + + +G E +NE
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENE 66
Query: 215 VVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIA 274
+ V+ + H N+V L + G + L+ + ++ G L + + + + FQ+
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVL 126
Query: 275 RGLLYLHEDCSSQIIHCDIKPQNIL---LDDHYNARISDFGLAKLLTLNQSKTIKTAIRG 331
+ YLH+ I+H D+KP+N+L LD+ ISDFGL+K+ ++ + G
Sbjct: 127 DAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACG 180
Query: 332 TKGYVAPEWYRKSTITAKVDVYSFGVL 358
T GYVAPE + + VD +S GV+
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 100/217 (46%), Gaps = 10/217 (4%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKE--FKNEVVVIGQTHHKNLVRLL 230
G+GSFG V+ + T A+KK D V D + E + V+ H L +
Sbjct: 26 GKGSFGKVFLAEFKKTNQFFAIKALKK-DVVLMDDDVECTMVEKRVLSLAWEHPFLTHMF 84
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIH 290
+N V E+LN G L + K + T A +I GL +LH S I++
Sbjct: 85 CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH---SKGIVY 141
Query: 291 CDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAKV 350
D+K NILLD + +I+DFG+ K L +KT GT Y+APE V
Sbjct: 142 RDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT--NXFCGTPDYIAPEILLGQKYNHSV 199
Query: 351 DVYSFGVLLLEIISCRKSFDIEMGEE--YAILTDWAF 385
D +SFGVLL E++ + F + EE ++I D F
Sbjct: 200 DWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPF 236
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 12/200 (6%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAV----KKLDRVFQDGEKEFKNEVVVIGQTHHKN 225
+E G G+FG V KG + + T + D +D E E V+ Q +
Sbjct: 17 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD---ELLAEANVMQQLDNPY 73
Query: 226 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 285
+VR++G C E ++ +LV E G L +L N + Q++ G+ YL E
Sbjct: 74 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE--- 129
Query: 286 SQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSK-TIKTAIRGTKGYVAPEWYRKS 344
S +H D+ +N+LL + A+ISDFGL+K L +++ +T + + APE
Sbjct: 130 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYY 189
Query: 345 TITAKVDVYSFGVLLLEIIS 364
++K DV+SFGVL+ E S
Sbjct: 190 KFSSKSDVWSFGVLMWEAFS 209
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 104/207 (50%), Gaps = 15/207 (7%)
Query: 158 YKALEEATD--NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG-EKEFKNE 214
+K E+ D +F++ G G+F V ++ + + VA+K + + +G E +NE
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENE 66
Query: 215 VVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIA 274
+ V+ + H N+V L + G + L+ + ++ G L + + + + FQ+
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVL 126
Query: 275 RGLLYLHEDCSSQIIHCDIKPQNIL---LDDHYNARISDFGLAKLLTLNQSKTIKTAIRG 331
+ YLH+ I+H D+KP+N+L LD+ ISDFGL+K+ ++ + G
Sbjct: 127 DAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACG 180
Query: 332 TKGYVAPEWYRKSTITAKVDVYSFGVL 358
T GYVAPE + + VD +S GV+
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 32/266 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVRL 229
G+G FG VY + + S +A+K L + + E + + EV + H N++RL
Sbjct: 16 GKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 72
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
G+ + L+ E+ GT+ L K ++A L Y H S ++I
Sbjct: 73 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVI 129
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DIKP+N+LL +I+DFG +++ + +T + GT Y+ PE K
Sbjct: 130 HRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 185
Query: 350 VDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIK 408
VD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 186 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL- 235
Query: 409 CVEKLLMVSIWCIQEDPSLRPTMRKV 434
+ +LL + +PS RP +R+V
Sbjct: 236 -ISRLL-------KHNPSQRPMLREV 253
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 120/278 (43%), Gaps = 33/278 (11%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 226
+++ G G FG V+ T T VAVK + E F E V+ H L
Sbjct: 18 KLEKKLGAGQFGEVWMA----TYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKL 72
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIARGLLYLHEDC 284
V+L + + ++ EF+ G+L FL + L I F QIA G+ ++ +
Sbjct: 73 VKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ-- 129
Query: 285 SSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVAPEWY 341
IH D++ NIL+ +I+DFGLA+++ N+ TA G K + APE
Sbjct: 130 -RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY----TAREGAKFPIKWTAPEAI 184
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDM 401
+ T K DV+SFG+LL+EI++ + + N ++ +E
Sbjct: 185 NFGSFTIKSDVWSFGILLMEIVTYGRI---------------PYPGMSNPEVIRALERGY 229
Query: 402 EAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
C E+L + + C + P RPT + +L+
Sbjct: 230 RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 267
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 104/207 (50%), Gaps = 15/207 (7%)
Query: 158 YKALEEATD--NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG-EKEFKNE 214
+K E+ D +F++ G G+F V ++ + + VA+K + + +G E +NE
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKKALEGKEGSMENE 66
Query: 215 VVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIA 274
+ V+ + H N+V L + G + L+ + ++ G L + + + + FQ+
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVL 126
Query: 275 RGLLYLHEDCSSQIIHCDIKPQNIL---LDDHYNARISDFGLAKLLTLNQSKTIKTAIRG 331
+ YLH+ I+H D+KP+N+L LD+ ISDFGL+K+ ++ + G
Sbjct: 127 DAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACG 180
Query: 332 TKGYVAPEWYRKSTITAKVDVYSFGVL 358
T GYVAPE + + VD +S GV+
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 32/266 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVRL 229
G+G FG VY + + S +A+K L + + E + + EV + H N++RL
Sbjct: 17 GKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
G+ + L+ E+ GT+ L K ++A L Y H S ++I
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVI 130
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DIKP+N+LL +I+DFG +++ + + A+ GT Y+ PE K
Sbjct: 131 HRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEK 186
Query: 350 VDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIK 408
VD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL- 236
Query: 409 CVEKLLMVSIWCIQEDPSLRPTMRKV 434
+ +LL + +PS RP +R+V
Sbjct: 237 -ISRLL-------KHNPSQRPMLREV 254
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 119/266 (44%), Gaps = 32/266 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVRL 229
G+G FG VY + + S +A+K L + + E + + EV + H N++RL
Sbjct: 20 GKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
G+ + L+ E+ GT+ L K ++A L Y H S ++I
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVI 133
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DIKP+N+LL +I+DFG +++ + +T + GT Y+ PE K
Sbjct: 134 HRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 189
Query: 350 VDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIK 408
VD++S GVL E + + F+ +E Y ++ F D + EG + ++ +
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDLISRL- 243
Query: 409 CVEKLLMVSIWCIQEDPSLRPTMRKV 434
++ +PS RP +R+V
Sbjct: 244 ------------LKHNPSQRPMLREV 257
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 32/266 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVRL 229
G+G FG VY + + S +A+K L + + E + + EV + H N++RL
Sbjct: 22 GKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
G+ + L+ E+ GT+ L K ++A L Y H S ++I
Sbjct: 79 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVI 135
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DIKP+N+LL +I+DFG +++ + +T + GT Y+ PE K
Sbjct: 136 HRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEK 191
Query: 350 VDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIK 408
VD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL- 241
Query: 409 CVEKLLMVSIWCIQEDPSLRPTMRKV 434
+ +LL + +PS RP +R+V
Sbjct: 242 -ISRLL-------KHNPSQRPMLREV 259
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 118/266 (44%), Gaps = 32/266 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVRL 229
G+G FG VY + + S +A+K L + + E + + EV + H N++RL
Sbjct: 22 GKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
G+ + L+ E+ G + L K ++A L Y H S ++I
Sbjct: 79 YGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH---SKRVI 135
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DIKP+N+LL +I+DFG +++ + +T + GT Y+ PE K
Sbjct: 136 HRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 191
Query: 350 VDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIK 408
VD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL- 241
Query: 409 CVEKLLMVSIWCIQEDPSLRPTMRKV 434
+ +LL + +PS RP +R+V
Sbjct: 242 -ISRLL-------KHNPSQRPMLREV 259
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 118/264 (44%), Gaps = 28/264 (10%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG-EKEFKNEVVVIGQTHHKNLVRLLG 231
G+G FG VY E R A+ V ++ + G E + + EV + H N++RL G
Sbjct: 14 GKGKFGNVYLAR-EKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHC 291
+ + L+ E+ GT+ L K ++A L Y H S ++IH
Sbjct: 73 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 129
Query: 292 DIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVD 351
DIKP+N+LL +I+DFG +++ + +T + GT Y+ PE KVD
Sbjct: 130 DIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 185
Query: 352 VYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCV 410
++S GVL E + + F+ +E Y ++ F D V E D+ +
Sbjct: 186 LWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL--I 234
Query: 411 EKLLMVSIWCIQEDPSLRPTMRKV 434
+LL + +PS RP +R+V
Sbjct: 235 SRLL-------KHNPSQRPMLREV 251
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 171 EAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK----NEVVVIGQTH---H 223
E G G++G V+K + VA+K++ RV Q GE+ EV V+ H
Sbjct: 18 EIGEGAYGKVFKA--RDLKNGGRFVALKRV-RV-QTGEEGMPLSTIREVAVLRHLETFEH 73
Query: 224 KNLVRLLGFC-----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARG 276
N+VRL C D LV+E ++ L ++L +P T ++ FQ+ RG
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHVDQD-LTTYLDKVPEPGVPTETIKDMMFQLLRG 132
Query: 277 LLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYV 336
L +LH S +++H D+KPQNIL+ +++DFGLA++ + + T++ T Y
Sbjct: 133 LDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA---LTSVVVTLWYR 186
Query: 337 APEWYRKSTITAKVDVYSFGVLLLEIISCRKSF 369
APE +S+ VD++S G + E+ + F
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMFRRKPLF 219
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 32/266 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVRL 229
G+G FG VY + + S +A+K L + + E + + EV + H N++RL
Sbjct: 17 GKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
G+ + L+ E+ GT+ L K ++A L Y H S ++I
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVI 130
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DIKP+N+LL +I+DFG +++ + +T + GT Y+ PE K
Sbjct: 131 HRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTXLCGTLDYLPPEMIEGRMHDEK 186
Query: 350 VDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIK 408
VD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL- 236
Query: 409 CVEKLLMVSIWCIQEDPSLRPTMRKV 434
+ +LL + +PS RP +R+V
Sbjct: 237 -ISRLL-------KHNPSQRPMLREV 254
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 12/200 (6%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAV----KKLDRVFQDGEKEFKNEVVVIGQTHHKN 225
+E G G+FG V KG + + T + D +D E E V+ Q +
Sbjct: 31 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD---ELLAEANVMQQLDNPY 87
Query: 226 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 285
+VR++G C E ++ +LV E G L +L N + Q++ G+ YL E
Sbjct: 88 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE--- 143
Query: 286 SQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQS-KTIKTAIRGTKGYVAPEWYRKS 344
S +H D+ +N+LL + A+ISDFGL+K L +++ +T + + APE
Sbjct: 144 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 203
Query: 345 TITAKVDVYSFGVLLLEIIS 364
++K DV+SFGVL+ E S
Sbjct: 204 KFSSKSDVWSFGVLMWEAFS 223
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 114/265 (43%), Gaps = 30/265 (11%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVRL 229
G+G FG VY + + S +A+K L + + E + + EV + H N++RL
Sbjct: 17 GKGKFGNVY---LAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
G+ + L+ E+ GT+ L K ++A L Y H S ++I
Sbjct: 74 YGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKKVI 130
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DIKP+N+LL +I+DFG +++ + + A+ GT Y+ PE K
Sbjct: 131 HRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEK 186
Query: 350 VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKC 409
VD++S GVL E + + F+ + D Y+ + D
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQ----------DTYKRISRVEFTFPDFVTEGARDL 236
Query: 410 VEKLLMVSIWCIQEDPSLRPTMRKV 434
+ +LL + +PS RP +R+V
Sbjct: 237 ISRLL-------KHNPSQRPMLREV 254
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 32/266 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVRL 229
G+G FG VY + + S +A+K L + + E + + EV + H N++RL
Sbjct: 18 GKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
G+ + L+ E+ GT+ L K ++A L Y H S ++I
Sbjct: 75 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVI 131
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DIKP+N+LL +I+DFG +++ + +T + GT Y+ PE K
Sbjct: 132 HRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEK 187
Query: 350 VDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIK 408
VD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 188 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL- 237
Query: 409 CVEKLLMVSIWCIQEDPSLRPTMRKV 434
+ +LL + +PS RP +R+V
Sbjct: 238 -ISRLL-------KHNPSQRPMLREV 255
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 32/266 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVRL 229
G+G FG VY + + S +A+K L + + E + + EV + H N++RL
Sbjct: 17 GKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
G+ + L+ E+ GT+ L K ++A L Y H S ++I
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVI 130
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DIKP+N+LL +I+DFG +++ + +T + GT Y+ PE K
Sbjct: 131 HRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEK 186
Query: 350 VDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIK 408
VD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL- 236
Query: 409 CVEKLLMVSIWCIQEDPSLRPTMRKV 434
+ +LL + +PS RP +R+V
Sbjct: 237 -ISRLL-------KHNPSQRPMLREV 254
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 171 EAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK----NEVVVIGQTH---H 223
E G G++G V+K + VA+K++ RV Q GE+ EV V+ H
Sbjct: 18 EIGEGAYGKVFKA--RDLKNGGRFVALKRV-RV-QTGEEGMPLSTIREVAVLRHLETFEH 73
Query: 224 KNLVRLLGFC-----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARG 276
N+VRL C D LV+E ++ L ++L +P T ++ FQ+ RG
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHVDQD-LTTYLDKVPEPGVPTETIKDMMFQLLRG 132
Query: 277 LLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYV 336
L +LH S +++H D+KPQNIL+ +++DFGLA++ + + T++ T Y
Sbjct: 133 LDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA---LTSVVVTLWYR 186
Query: 337 APEWYRKSTITAKVDVYSFGVLLLEIISCRKSF 369
APE +S+ VD++S G + E+ + F
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMFRRKPLF 219
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 94/207 (45%), Gaps = 23/207 (11%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVK--KLDRVFQ-DGEKEFKNEVVVIGQTHHKNL 226
E+ G GSFG+V +G + T +VAVK K D + Q + +F EV + H+NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTL--------ASFLFGNLKPSWNLRTNIAFQIARGLL 278
+RL G ++ V E G+L FL G L + A Q+A G+
Sbjct: 78 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTL-------SRYAVQVAEGMG 129
Query: 279 YLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK-GYVA 337
YL S + IH D+ +N+LL +I DFGL + L N + R + A
Sbjct: 130 YLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 186
Query: 338 PEWYRKSTITAKVDVYSFGVLLLEIIS 364
PE + T + D + FGV L E+ +
Sbjct: 187 PESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 171 EAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK----NEVVVIGQTH---H 223
E G G++G V+K + VA+K++ RV Q GE+ EV V+ H
Sbjct: 18 EIGEGAYGKVFKA--RDLKNGGRFVALKRV-RV-QTGEEGMPLSTIREVAVLRHLETFEH 73
Query: 224 KNLVRLLGFC-----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARG 276
N+VRL C D LV+E ++ L ++L +P T ++ FQ+ RG
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHVDQD-LTTYLDKVPEPGVPTETIKDMMFQLLRG 132
Query: 277 LLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYV 336
L +LH S +++H D+KPQNIL+ +++DFGLA++ + + T++ T Y
Sbjct: 133 LDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA---LTSVVVTLWYR 186
Query: 337 APEWYRKSTITAKVDVYSFGVLLLEIISCRKSF 369
APE +S+ VD++S G + E+ + F
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMFRRKPLF 219
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 94/207 (45%), Gaps = 23/207 (11%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVK--KLDRVFQ-DGEKEFKNEVVVIGQTHHKNL 226
E+ G GSFG+V +G + T +VAVK K D + Q + +F EV + H+NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTL--------ASFLFGNLKPSWNLRTNIAFQIARGLL 278
+RL G ++ V E G+L FL G L + A Q+A G+
Sbjct: 74 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTL-------SRYAVQVAEGMG 125
Query: 279 YLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK-GYVA 337
YL S + IH D+ +N+LL +I DFGL + L N + R + A
Sbjct: 126 YLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 182
Query: 338 PEWYRKSTITAKVDVYSFGVLLLEIIS 364
PE + T + D + FGV L E+ +
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 94/207 (45%), Gaps = 23/207 (11%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVK--KLDRVFQ-DGEKEFKNEVVVIGQTHHKNL 226
E+ G GSFG+V +G + T +VAVK K D + Q + +F EV + H+NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTL--------ASFLFGNLKPSWNLRTNIAFQIARGLL 278
+RL G ++ V E G+L FL G L + A Q+A G+
Sbjct: 78 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTL-------SRYAVQVAEGMG 129
Query: 279 YLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK-GYVA 337
YL S + IH D+ +N+LL +I DFGL + L N + R + A
Sbjct: 130 YLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 186
Query: 338 PEWYRKSTITAKVDVYSFGVLLLEIIS 364
PE + T + D + FGV L E+ +
Sbjct: 187 PESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 32/266 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVRL 229
G+G FG VY + + S +A+K L + + E + + EV + H N++RL
Sbjct: 17 GKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
G+ + L+ E+ GT+ L K ++A L Y H S ++I
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVI 130
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DIKP+N+LL +I+DFG +++ + +T + GT Y+ PE K
Sbjct: 131 HRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEK 186
Query: 350 VDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIK 408
VD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL- 236
Query: 409 CVEKLLMVSIWCIQEDPSLRPTMRKV 434
+ +LL + +PS RP +R+V
Sbjct: 237 -ISRLL-------KHNPSQRPMLREV 254
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 120/278 (43%), Gaps = 33/278 (11%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 226
+++ G G FG V+ T T VAVK + E F E V+ H L
Sbjct: 191 KLEKKLGAGQFGEVWMA----TYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKL 245
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIARGLLYLHEDC 284
V+L + + ++ EF+ G+L FL + L I F QIA G+ ++ +
Sbjct: 246 VKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ-- 302
Query: 285 SSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVAPEWY 341
IH D++ NIL+ +I+DFGLA+++ N+ TA G K + APE
Sbjct: 303 -RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY----TAREGAKFPIKWTAPEAI 357
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDM 401
+ T K DV+SFG+LL+EI++ + + N ++ +E
Sbjct: 358 NFGSFTIKSDVWSFGILLMEIVTYGRI---------------PYPGMSNPEVIRALERGY 402
Query: 402 EAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
C E+L + + C + P RPT + +L+
Sbjct: 403 RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 440
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 94/207 (45%), Gaps = 23/207 (11%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVK--KLDRVFQ-DGEKEFKNEVVVIGQTHHKNL 226
E+ G GSFG+V +G + T +VAVK K D + Q + +F EV + H+NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTL--------ASFLFGNLKPSWNLRTNIAFQIARGLL 278
+RL G ++ V E G+L FL G L + A Q+A G+
Sbjct: 74 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTL-------SRYAVQVAEGMG 125
Query: 279 YLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK-GYVA 337
YL S + IH D+ +N+LL +I DFGL + L N + R + A
Sbjct: 126 YLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 182
Query: 338 PEWYRKSTITAKVDVYSFGVLLLEIIS 364
PE + T + D + FGV L E+ +
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 12/200 (6%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAV----KKLDRVFQDGEKEFKNEVVVIGQTHHKN 225
+E G G+FG V KG + + T + D +D E E V+ Q +
Sbjct: 17 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD---ELLAEANVMQQLDNPY 73
Query: 226 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 285
+VR++G C E ++ +LV E G L +L N + Q++ G+ YL E
Sbjct: 74 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE--- 129
Query: 286 SQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQS-KTIKTAIRGTKGYVAPEWYRKS 344
S +H D+ +N+LL + A+ISDFGL+K L +++ +T + + APE
Sbjct: 130 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 189
Query: 345 TITAKVDVYSFGVLLLEIIS 364
++K DV+SFGVL+ E S
Sbjct: 190 KFSSKSDVWSFGVLMWEAFS 209
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 12/200 (6%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAV----KKLDRVFQDGEKEFKNEVVVIGQTHHKN 225
+E G G+FG V KG + + T + D +D E E V+ Q +
Sbjct: 11 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD---ELLAEANVMQQLDNPY 67
Query: 226 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 285
+VR++G C E ++ +LV E G L +L N + Q++ G+ YL E
Sbjct: 68 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE--- 123
Query: 286 SQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQS-KTIKTAIRGTKGYVAPEWYRKS 344
S +H D+ +N+LL + A+ISDFGL+K L +++ +T + + APE
Sbjct: 124 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 183
Query: 345 TITAKVDVYSFGVLLLEIIS 364
++K DV+SFGVL+ E S
Sbjct: 184 KFSSKSDVWSFGVLMWEAFS 203
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 12/200 (6%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAV----KKLDRVFQDGEKEFKNEVVVIGQTHHKN 225
+E G G+FG V KG + + T + D +D E E V+ Q +
Sbjct: 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD---ELLAEANVMQQLDNPY 69
Query: 226 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 285
+VR++G C E ++ +LV E G L +L N + Q++ G+ YL E
Sbjct: 70 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE--- 125
Query: 286 SQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQS-KTIKTAIRGTKGYVAPEWYRKS 344
S +H D+ +N+LL + A+ISDFGL+K L +++ +T + + APE
Sbjct: 126 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 185
Query: 345 TITAKVDVYSFGVLLLEIIS 364
++K DV+SFGVL+ E S
Sbjct: 186 KFSSKSDVWSFGVLMWEAFS 205
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 124/295 (42%), Gaps = 39/295 (13%)
Query: 167 NFKEEAGRGSFGIVYK----GVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH 222
+F + G G+FG V + G+I++ T AV + K + E V+ +
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 223 HKNLVRLLGFCDEGQNRLLVYEFLNNGTLA--------SFLFGNLKPS----------WN 264
H N+V LLG C G L++ E+ G L SF+ P+
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 265 LRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKT 324
+ ++Q+A+G+ +L S IH D+ +NILL +I DFGLA+ + + +
Sbjct: 169 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYV 225
Query: 325 IKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA 384
+K R ++APE T + DV+S+G+ L E+ S S M +
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD-------- 277
Query: 385 FDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
K +++ ++ ++ + C DP RPT +++ Q++E
Sbjct: 278 ------SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 12/200 (6%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAV----KKLDRVFQDGEKEFKNEVVVIGQTHHKN 225
+E G G+FG V KG + + T + D +D E E V+ Q +
Sbjct: 23 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD---ELLAEANVMQQLDNPY 79
Query: 226 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 285
+VR++G C E ++ +LV E G L +L N + Q++ G+ YL E
Sbjct: 80 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE--- 135
Query: 286 SQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQS-KTIKTAIRGTKGYVAPEWYRKS 344
S +H D+ +N+LL + A+ISDFGL+K L +++ +T + + APE
Sbjct: 136 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 195
Query: 345 TITAKVDVYSFGVLLLEIIS 364
++K DV+SFGVL+ E S
Sbjct: 196 KFSSKSDVWSFGVLMWEAFS 215
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 95/200 (47%), Gaps = 17/200 (8%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G G FG V+ G ++T VAVK L + + F E ++ H LVRL
Sbjct: 22 GAGQFGEVWMGYY----NNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAV 76
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIARGLLYLHEDCSSQIIH 290
+ ++ E++ G+L FL + L I F QIA G+ Y+ IH
Sbjct: 77 VTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIH 133
Query: 291 CDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVAPEWYRKSTIT 347
D++ N+L+ + +I+DFGLA+++ N+ TA G K + APE T
Sbjct: 134 RDLRAANVLVSESLMCKIADFGLARVIEDNEY----TAREGAKFPIKWTAPEAINFGCFT 189
Query: 348 AKVDVYSFGVLLLEIISCRK 367
K DV+SFG+LL EI++ K
Sbjct: 190 IKSDVWSFGILLYEIVTYGK 209
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 124/295 (42%), Gaps = 39/295 (13%)
Query: 167 NFKEEAGRGSFGIVYK----GVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH 222
+F + G G+FG V + G+I++ T AV + K + E V+ +
Sbjct: 26 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 85
Query: 223 HKNLVRLLGFCDEGQNRLLVYEFLNNGTLA--------SFLFGNLKPS----------WN 264
H N+V LLG C G L++ E+ G L SF+ P+
Sbjct: 86 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 145
Query: 265 LRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKT 324
+ ++Q+A+G+ +L S IH D+ +NILL +I DFGLA+ + + +
Sbjct: 146 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 202
Query: 325 IKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA 384
+K R ++APE T + DV+S+G+ L E+ S S M +
Sbjct: 203 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD-------- 254
Query: 385 FDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
K +++ ++ ++ + C DP RPT +++ Q++E
Sbjct: 255 ------SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 303
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 119/276 (43%), Gaps = 28/276 (10%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKNLVRLLG 231
G G FG V++G+ + AVA+K D +E F E + + Q H ++V+L+G
Sbjct: 19 GEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG 78
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI--AFQIARGLLYLHEDCSSQII 289
E ++ E G L SFL K S +L + I A+Q++ L YL S + +
Sbjct: 79 VITENPV-WIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKG--YVAPEWYRKSTIT 347
H DI +N+L+ + ++ DFGL++ + + T A +G ++APE T
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTXXKASKGKLPIKWMAPESINFRRFT 190
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
+ DV+ FGV + EI+ + F +N + +E
Sbjct: 191 SASDVWMFGVCMWEIL---------------MHGVKPFQGVKNNDVIGRIENGERLPMPP 235
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVE 443
C L + C DPS RP ++ L ++E
Sbjct: 236 NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 271
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 123/293 (41%), Gaps = 42/293 (14%)
Query: 173 GRGSFGIVYK----GVIETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQT-HHKNL 226
G G+FG V G+ + VAVK L D + + +E+ ++ HKN+
Sbjct: 44 GEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNI 103
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI----------------A 270
+ LLG C + ++ + + G L +L P +I
Sbjct: 104 INLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 163
Query: 271 FQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIR 330
+Q+ARG+ YL S + IH D+ +N+L+ ++ +I+DFGLA+ + T R
Sbjct: 164 YQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 331 GTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFDCYR 389
++APE T + DV+SFGVL+ EI + G Y I + F +
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-------GSPYPGIPVEELFKLLK 273
Query: 390 NGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
G D C +L M+ C PS RPT +++ + L+ ++
Sbjct: 274 EGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 32/266 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVRL 229
G+G FG VY + + S +A+K L + + E + + EV + H N++RL
Sbjct: 22 GKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
G+ + L+ E+ G + L K ++A L Y H S ++I
Sbjct: 79 YGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH---SKRVI 135
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DIKP+N+LL +I+DFG +++ + + + GT Y+ PE K
Sbjct: 136 HRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLXGTLDYLPPEMIEGRMHDEK 191
Query: 350 VDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIK 408
VD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL- 241
Query: 409 CVEKLLMVSIWCIQEDPSLRPTMRKV 434
+ +LL + +PS RP +R+V
Sbjct: 242 -ISRLL-------KHNPSQRPMLREV 259
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 123/293 (41%), Gaps = 42/293 (14%)
Query: 173 GRGSFGIVYK----GVIETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQT-HHKNL 226
G G FG V G+ + VAVK L D + + +E+ ++ HKN+
Sbjct: 90 GEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNI 149
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI----------------A 270
+ LLG C + ++ E+ + G L +L P +I
Sbjct: 150 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 209
Query: 271 FQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIR 330
+Q+ARG+ YL S + IH D+ +N+L+ ++ +I+DFGLA+ + T R
Sbjct: 210 YQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 266
Query: 331 GTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFDCYR 389
++APE T + DV+SFGVL+ EI + G Y I + F +
Sbjct: 267 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-------GSPYPGIPVEELFKLLK 319
Query: 390 NGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
G D C +L M+ C PS RPT +++ + L+ ++
Sbjct: 320 EGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 363
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 102/206 (49%), Gaps = 26/206 (12%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK--EFKNEVVVIGQTHHKNLV 227
+ G GSFG VYKG VAVK L+ ++ FKNEV V+ +T H N++
Sbjct: 14 QRIGSGSFGTVYKGKWHGD------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAFQIARGLLYLH 281
+G+ + Q +V ++ +L L F +K +IA Q A+G+ YLH
Sbjct: 68 LFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIK-----LIDIARQTAQGMDYLH 121
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
+ IIH D+K NI L + +I DFGLA + + G+ ++APE
Sbjct: 122 ---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 178
Query: 342 R---KSTITAKVDVYSFGVLLLEIIS 364
R K+ + + DVY+FG++L E+++
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMT 204
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 96/200 (48%), Gaps = 17/200 (8%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G G FG V+ G ++T VAVK L + + F E ++ H LVRL
Sbjct: 21 GAGQFGEVWMGYY----NNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAV 75
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIARGLLYLHEDCSSQIIH 290
+ + ++ EF+ G+L FL + L I F QIA G+ Y+ IH
Sbjct: 76 VTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIH 132
Query: 291 CDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVAPEWYRKSTIT 347
D++ N+L+ + +I+DFGLA+++ N+ TA G K + APE T
Sbjct: 133 RDLRAANVLVSESLMCKIADFGLARVIEDNEY----TAREGAKFPIKWTAPEAINFGCFT 188
Query: 348 AKVDVYSFGVLLLEIISCRK 367
K +V+SFG+LL EI++ K
Sbjct: 189 IKSNVWSFGILLYEIVTYGK 208
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 102/206 (49%), Gaps = 26/206 (12%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK--EFKNEVVVIGQTHHKNLV 227
+ G GSFG VYKG VAVK L+ ++ FKNEV V+ +T H N++
Sbjct: 34 QRIGSGSFGTVYKGKWHGD------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 87
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAFQIARGLLYLH 281
+G+ + Q +V ++ +L L F +K +IA Q A+G+ YLH
Sbjct: 88 LFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIK-----LIDIARQTAQGMDYLH 141
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
+ IIH D+K NI L + +I DFGLA + + G+ ++APE
Sbjct: 142 ---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 198
Query: 342 R---KSTITAKVDVYSFGVLLLEIIS 364
R K+ + + DVY+FG++L E+++
Sbjct: 199 RMQDKNPYSFQSDVYAFGIVLYELMT 224
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 119/276 (43%), Gaps = 28/276 (10%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKNLVRLLG 231
G G FG V++G+ + AVA+K D +E F E + + Q H ++V+L+G
Sbjct: 19 GEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG 78
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI--AFQIARGLLYLHEDCSSQII 289
E ++ E G L SFL K S +L + I A+Q++ L YL S + +
Sbjct: 79 VITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKG--YVAPEWYRKSTIT 347
H DI +N+L+ + ++ DFGL++ + + T A +G ++APE T
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
+ DV+ FGV + EI+ + F +N + +E
Sbjct: 191 SASDVWMFGVCMWEIL---------------MHGVKPFQGVKNNDVIGRIENGERLPMPP 235
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVE 443
C L + C DPS RP ++ L ++E
Sbjct: 236 NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 271
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 101/200 (50%), Gaps = 9/200 (4%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 229
E+ G+G+ G VY + T VA+++++ Q ++ NE++V+ + + N+V
Sbjct: 27 EKIGQGASGTVYTAMDVATGQE---VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNY 83
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
L G +V E+L G+L + + + + + L +LH S+Q+I
Sbjct: 84 LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA-VCRECLQALEFLH---SNQVI 139
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H +IK NILL + +++DFG +T QSK ++ + GT ++APE + K
Sbjct: 140 HRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPK 197
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD++S G++ +E+I +
Sbjct: 198 VDIWSLGIMAIEMIEGEPPY 217
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 124/295 (42%), Gaps = 39/295 (13%)
Query: 167 NFKEEAGRGSFGIVYK----GVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH 222
+F + G G+FG V + G+I++ T AV + K + E V+ +
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 223 HKNLVRLLGFCDEGQNRLLVYEFLNNGTLA--------SFLFGNLKPS----------WN 264
H N+V LLG C G L++ E+ G L SF+ P+
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 265 LRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKT 324
+ ++Q+A+G+ +L S IH D+ +NILL +I DFGLA+ + + +
Sbjct: 169 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 225
Query: 325 IKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA 384
+K R ++APE T + DV+S+G+ L E+ S S M +
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD-------- 277
Query: 385 FDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
K +++ ++ ++ + C DP RPT +++ Q++E
Sbjct: 278 ------SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 119/276 (43%), Gaps = 28/276 (10%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKNLVRLLG 231
G G FG V++G+ + AVA+K D +E F E + + Q H ++V+L+G
Sbjct: 22 GEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG 81
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI--AFQIARGLLYLHEDCSSQII 289
E ++ E G L SFL K S +L + I A+Q++ L YL S + +
Sbjct: 82 VITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLE---SKRFV 136
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKG--YVAPEWYRKSTIT 347
H DI +N+L+ + ++ DFGL++ + + T A +G ++APE T
Sbjct: 137 HRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPESINFRRFT 193
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
+ DV+ FGV + EI+ + F +N + +E
Sbjct: 194 SASDVWMFGVCMWEIL---------------MHGVKPFQGVKNNDVIGRIENGERLPMPP 238
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVE 443
C L + C DPS RP ++ L ++E
Sbjct: 239 NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 274
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 104/217 (47%), Gaps = 19/217 (8%)
Query: 172 AGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKN----EVVVIGQTHHKNLV 227
G GS+G+V K + + VA+KK + D +K K E+ ++ Q H+NLV
Sbjct: 33 VGEGSYGMVMKC---RNKDTGRIVAIKKF--LESDDDKMVKKIAMREIKLLKQLRHENLV 87
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASF-LFGNLKPSWNLRTNIAFQIARGLLYLHEDCSS 286
LL C + + LV+EF+++ L LF N + + FQI G+ + H S
Sbjct: 88 NLLEVCKKKKRWYLVFEFVDHTILDDLELFPN-GLDYQVVQKYLFQIINGIGFCH---SH 143
Query: 287 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTI 346
IIH DIKP+NIL+ ++ DFG A+ TL + T+ Y APE
Sbjct: 144 NIIHRDIKPENILVSQSGVVKLCDFGFAR--TLAAPGEVYDDEVATRWYRAPELLVGDVK 201
Query: 347 TAK-VDVYSFGVLLLEIISCRKSF--DIEMGEEYAIL 380
K VDV++ G L+ E+ F D ++ + Y I+
Sbjct: 202 YGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIM 238
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 102/206 (49%), Gaps = 26/206 (12%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK--EFKNEVVVIGQTHHKNLV 227
+ G GSFG VYKG VAVK L+ ++ FKNEV V+ +T H N++
Sbjct: 42 QRIGSGSFGTVYKGKWHGD------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAFQIARGLLYLH 281
+G+ + Q +V ++ +L L F +K +IA Q A+G+ YLH
Sbjct: 96 LFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIK-----LIDIARQTAQGMDYLH 149
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
+ IIH D+K NI L + +I DFGLA + + G+ ++APE
Sbjct: 150 ---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 206
Query: 342 R---KSTITAKVDVYSFGVLLLEIIS 364
R K+ + + DVY+FG++L E+++
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELMT 232
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 98/204 (48%), Gaps = 18/204 (8%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+G FG V + T ++K + GE NE ++ + + + +V L +
Sbjct: 193 GKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL-AY 251
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDC-------S 285
E ++ L + L NG G+LK F AR + Y E C
Sbjct: 252 AYETKDALCLVLTLMNG-------GDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHR 304
Query: 286 SQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKST 345
+I++ D+KP+NILLDDH + RISD GLA + + + +TIK + GT GY+APE +
Sbjct: 305 ERIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGRV-GTVGYMAPEVVKNER 361
Query: 346 ITAKVDVYSFGVLLLEIISCRKSF 369
T D ++ G LL E+I+ + F
Sbjct: 362 YTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 119/276 (43%), Gaps = 28/276 (10%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKNLVRLLG 231
G G FG V++G+ + AVA+K D +E F E + + Q H ++V+L+G
Sbjct: 47 GEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG 106
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI--AFQIARGLLYLHEDCSSQII 289
E ++ E G L SFL K S +L + I A+Q++ L YL S + +
Sbjct: 107 VITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLE---SKRFV 161
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKG--YVAPEWYRKSTIT 347
H DI +N+L+ + ++ DFGL++ + + T A +G ++APE T
Sbjct: 162 HRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPESINFRRFT 218
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
+ DV+ FGV + EI+ + F +N + +E
Sbjct: 219 SASDVWMFGVCMWEIL---------------MHGVKPFQGVKNNDVIGRIENGERLPMPP 263
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVE 443
C L + C DPS RP ++ L ++E
Sbjct: 264 NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 299
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 100/200 (50%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDR--VFQDGEKEFKN-EVVVIGQTHHKNLVRL 229
G GSFG V+ + +R + A+K L + V + + E N E +++ H ++R+
Sbjct: 15 GTGSFGRVH---LIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRM 71
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
G + Q ++ +++ G L S L + + + A ++ L YLH S II
Sbjct: 72 WGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLH---SKDII 128
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+NILLD + + +I+DFG AK + + + GT Y+APE
Sbjct: 129 YRDLKPENILLDKNGHIKITDFGFAKYVP-----DVTYXLCGTPDYIAPEVVSTKPYNKS 183
Query: 350 VDVYSFGVLLLEIISCRKSF 369
+D +SFG+L+ E+++ F
Sbjct: 184 IDWWSFGILIYEMLAGYTPF 203
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 124/295 (42%), Gaps = 39/295 (13%)
Query: 167 NFKEEAGRGSFGIVYK----GVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH 222
+F + G G+FG V + G+I++ T AV + K + E V+ +
Sbjct: 44 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 103
Query: 223 HKNLVRLLGFCDEGQNRLLVYEFLNNGTLA--------SFLFGNLKPS----------WN 264
H N+V LLG C G L++ E+ G L SF+ P+
Sbjct: 104 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 163
Query: 265 LRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKT 324
+ ++Q+A+G+ +L S IH D+ +NILL +I DFGLA+ + + +
Sbjct: 164 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 220
Query: 325 IKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA 384
+K R ++APE T + DV+S+G+ L E+ S S M +
Sbjct: 221 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD-------- 272
Query: 385 FDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
K +++ ++ ++ + C DP RPT +++ Q++E
Sbjct: 273 ------SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 321
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 119/276 (43%), Gaps = 28/276 (10%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKNLVRLLG 231
G G FG V++G+ + AVA+K D +E F E + + Q H ++V+L+G
Sbjct: 24 GEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG 83
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI--AFQIARGLLYLHEDCSSQII 289
E ++ E G L SFL K S +L + I A+Q++ L YL S + +
Sbjct: 84 VITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLE---SKRFV 138
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRG--TKGYVAPEWYRKSTIT 347
H DI +N+L+ + ++ DFGL++ + + T A +G ++APE T
Sbjct: 139 HRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPESINFRRFT 195
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
+ DV+ FGV + EI+ + F +N + +E
Sbjct: 196 SASDVWMFGVCMWEIL---------------MHGVKPFQGVKNNDVIGRIENGERLPMPP 240
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVE 443
C L + C DPS RP ++ L ++E
Sbjct: 241 NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 276
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 98/204 (48%), Gaps = 18/204 (8%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+G FG V + T ++K + GE NE ++ + + + +V L +
Sbjct: 193 GKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL-AY 251
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDC-------S 285
E ++ L + L NG G+LK F AR + Y E C
Sbjct: 252 AYETKDALCLVLTLMNG-------GDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHR 304
Query: 286 SQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKST 345
+I++ D+KP+NILLDDH + RISD GLA + + + +TIK + GT GY+APE +
Sbjct: 305 ERIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGRV-GTVGYMAPEVVKNER 361
Query: 346 ITAKVDVYSFGVLLLEIISCRKSF 369
T D ++ G LL E+I+ + F
Sbjct: 362 YTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 118/266 (44%), Gaps = 32/266 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVRL 229
G+G FG VY + + S +A+K L + + E + + EV + H N++RL
Sbjct: 19 GKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
G+ + L+ E+ GT+ L K ++A L Y H S ++I
Sbjct: 76 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVI 132
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DIKP+N+LL +I+DFG +++ + + + GT Y+ PE K
Sbjct: 133 HRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEK 188
Query: 350 VDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIK 408
VD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 189 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL- 238
Query: 409 CVEKLLMVSIWCIQEDPSLRPTMRKV 434
+ +LL + +PS RP +R+V
Sbjct: 239 -ISRLL-------KHNPSQRPMLREV 256
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 119/266 (44%), Gaps = 32/266 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVRL 229
G+G FG VY + + S +A+K L + + E + + EV + H N++RL
Sbjct: 19 GKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
G+ + L+ E+ GT+ L K ++A L Y H S ++I
Sbjct: 76 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVI 132
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DIKP+N+LL +I++FG +++ + +T + GT Y+ PE K
Sbjct: 133 HRDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 188
Query: 350 VDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIK 408
VD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 189 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL- 238
Query: 409 CVEKLLMVSIWCIQEDPSLRPTMRKV 434
+ +LL + +PS RP +R+V
Sbjct: 239 -ISRLL-------KHNPSQRPMLREV 256
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 119/276 (43%), Gaps = 28/276 (10%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKNLVRLLG 231
G G FG V++G+ + AVA+K D +E F E + + Q H ++V+L+G
Sbjct: 19 GEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG 78
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI--AFQIARGLLYLHEDCSSQII 289
E ++ E G L SFL K S +L + I A+Q++ L YL S + +
Sbjct: 79 VITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKG--YVAPEWYRKSTIT 347
H DI +N+L+ + ++ DFGL++ + + T A +G ++APE T
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
+ DV+ FGV + EI+ + F +N + +E
Sbjct: 191 SASDVWMFGVCMWEIL---------------MHGVKPFQGVKNNDVIGRIENGERLPMPP 235
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVE 443
C L + C DPS RP ++ L ++E
Sbjct: 236 NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 271
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 119/276 (43%), Gaps = 28/276 (10%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKNLVRLLG 231
G G FG V++G+ + AVA+K D +E F E + + Q H ++V+L+G
Sbjct: 21 GEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG 80
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI--AFQIARGLLYLHEDCSSQII 289
E ++ E G L SFL K S +L + I A+Q++ L YL S + +
Sbjct: 81 VITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLE---SKRFV 135
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKG--YVAPEWYRKSTIT 347
H DI +N+L+ + ++ DFGL++ + + T A +G ++APE T
Sbjct: 136 HRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPESINFRRFT 192
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
+ DV+ FGV + EI+ + F +N + +E
Sbjct: 193 SASDVWMFGVCMWEIL---------------MHGVKPFQGVKNNDVIGRIENGERLPMPP 237
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVE 443
C L + C DPS RP ++ L ++E
Sbjct: 238 NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 273
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 119/276 (43%), Gaps = 28/276 (10%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKNLVRLLG 231
G G FG V++G+ + AVA+K D +E F E + + Q H ++V+L+G
Sbjct: 16 GEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG 75
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI--AFQIARGLLYLHEDCSSQII 289
E ++ E G L SFL K S +L + I A+Q++ L YL S + +
Sbjct: 76 VITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLE---SKRFV 130
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKG--YVAPEWYRKSTIT 347
H DI +N+L+ + ++ DFGL++ + + T A +G ++APE T
Sbjct: 131 HRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPESINFRRFT 187
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
+ DV+ FGV + EI+ + F +N + +E
Sbjct: 188 SASDVWMFGVCMWEIL---------------MHGVKPFQGVKNNDVIGRIENGERLPMPP 232
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVE 443
C L + C DPS RP ++ L ++E
Sbjct: 233 NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 268
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 123/293 (41%), Gaps = 42/293 (14%)
Query: 173 GRGSFGIVYK----GVIETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQT-HHKNL 226
G G+FG V G+ + VAVK L D + + +E+ ++ HKN+
Sbjct: 44 GEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNI 103
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI----------------A 270
+ LLG C + ++ + + G L +L P +I
Sbjct: 104 INLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 163
Query: 271 FQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIR 330
+Q+ARG+ YL S + IH D+ +N+L+ ++ +I+DFGLA+ + T R
Sbjct: 164 YQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 331 GTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFDCYR 389
++APE T + DV+SFGVL+ EI + G Y I + F +
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-------GSPYPGIPVEELFKLLK 273
Query: 390 NGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
G D C +L M+ C PS RPT +++ + L+ ++
Sbjct: 274 EGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 124/295 (42%), Gaps = 39/295 (13%)
Query: 167 NFKEEAGRGSFGIVYK----GVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH 222
+F + G G+FG V + G+I++ T AV + K + E V+ +
Sbjct: 42 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 101
Query: 223 HKNLVRLLGFCDEGQNRLLVYEFLNNGTLA--------SFLFGNLKPS----------WN 264
H N+V LLG C G L++ E+ G L SF+ P+
Sbjct: 102 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 161
Query: 265 LRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKT 324
+ ++Q+A+G+ +L S IH D+ +NILL +I DFGLA+ + + +
Sbjct: 162 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 218
Query: 325 IKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA 384
+K R ++APE T + DV+S+G+ L E+ S S M +
Sbjct: 219 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD-------- 270
Query: 385 FDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
K +++ ++ ++ + C DP RPT +++ Q++E
Sbjct: 271 ------SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 319
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 12/200 (6%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAV----KKLDRVFQDGEKEFKNEVVVIGQTHHKN 225
+E G G+FG V KG + + T + D +D E E V+ Q +
Sbjct: 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD---ELLAEANVMQQLDNPY 431
Query: 226 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 285
+VR++G C E ++ +LV E G L +L N + Q++ G+ YL E
Sbjct: 432 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE--- 487
Query: 286 SQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQS-KTIKTAIRGTKGYVAPEWYRKS 344
S +H D+ +N+LL + A+ISDFGL+K L +++ +T + + APE
Sbjct: 488 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 547
Query: 345 TITAKVDVYSFGVLLLEIIS 364
++K DV+SFGVL+ E S
Sbjct: 548 KFSSKSDVWSFGVLMWEAFS 567
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 119/266 (44%), Gaps = 32/266 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVRL 229
G+G FG VY + + S +A+K L + + E + + EV + H N++RL
Sbjct: 20 GKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
G+ + L+ E+ GT+ L K ++A L Y H S ++I
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVI 133
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DIKP+N+LL +I++FG +++ + +T + GT Y+ PE K
Sbjct: 134 HRDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 189
Query: 350 VDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIK 408
VD++S GVL E + + F+ +E Y ++ F D + EG + ++ +
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDLISRL- 243
Query: 409 CVEKLLMVSIWCIQEDPSLRPTMRKV 434
++ +PS RP +R+V
Sbjct: 244 ------------LKHNPSQRPMLREV 257
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 118/266 (44%), Gaps = 32/266 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVRL 229
G+G FG VY + + S +A+K L + + E + + EV + H N++RL
Sbjct: 18 GKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
G+ + L+ E+ GT+ L K ++A L Y H S ++I
Sbjct: 75 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVI 131
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DIKP+N+LL +I+DFG +++ + + + GT Y+ PE K
Sbjct: 132 HRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEK 187
Query: 350 VDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIK 408
VD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 188 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL- 237
Query: 409 CVEKLLMVSIWCIQEDPSLRPTMRKV 434
+ +LL + +PS RP +R+V
Sbjct: 238 -ISRLL-------KHNPSQRPMLREV 255
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 12/200 (6%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAV----KKLDRVFQDGEKEFKNEVVVIGQTHHKN 225
+E G G+FG V KG + + T + D +D E E V+ Q +
Sbjct: 376 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD---ELLAEANVMQQLDNPY 432
Query: 226 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 285
+VR++G C E ++ +LV E G L +L N + Q++ G+ YL E
Sbjct: 433 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE--- 488
Query: 286 SQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQS-KTIKTAIRGTKGYVAPEWYRKS 344
S +H D+ +N+LL + A+ISDFGL+K L +++ +T + + APE
Sbjct: 489 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 548
Query: 345 TITAKVDVYSFGVLLLEIIS 364
++K DV+SFGVL+ E S
Sbjct: 549 KFSSKSDVWSFGVLMWEAFS 568
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 118/266 (44%), Gaps = 32/266 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVRL 229
G+G FG VY + + S +A+K L + + E + + EV + H N++RL
Sbjct: 17 GKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
G+ + L+ E+ GT+ L K ++A L Y H S ++I
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVI 130
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DIKP+N+LL +I+DFG +++ + + + GT Y+ PE K
Sbjct: 131 HRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEK 186
Query: 350 VDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIK 408
VD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL- 236
Query: 409 CVEKLLMVSIWCIQEDPSLRPTMRKV 434
+ +LL + +PS RP +R+V
Sbjct: 237 -ISRLL-------KHNPSQRPMLREV 254
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 119/276 (43%), Gaps = 28/276 (10%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKNLVRLLG 231
G G FG V++G+ + AVA+K D +E F E + + Q H ++V+L+G
Sbjct: 399 GEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG 458
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI--AFQIARGLLYLHEDCSSQII 289
E ++ E G L SFL K S +L + I A+Q++ L YL S + +
Sbjct: 459 VITENPV-WIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLE---SKRFV 513
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK--GYVAPEWYRKSTIT 347
H DI +N+L+ + ++ DFGL++ + + T A +G ++APE T
Sbjct: 514 HRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
+ DV+ FGV + EI+ + F +N + +E
Sbjct: 571 SASDVWMFGVCMWEIL---------------MHGVKPFQGVKNNDVIGRIENGERLPMPP 615
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVE 443
C L + C DPS RP ++ L ++E
Sbjct: 616 NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVRL 229
G+G FG VY + R S +A+K L + + E + + EV + H N++RL
Sbjct: 21 GKGKFGNVY---LARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
G+ + L+ E+ GT+ L + ++A L Y H S ++I
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCH---SKRVI 134
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DIKP+N+LL + +I+DFG +++ + +T + GT Y+ PE K
Sbjct: 135 HRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 190
Query: 350 VDVYSFGVLLLEIISCRKSFDIEMGEE 376
VD++S GVL E + F+ +E
Sbjct: 191 VDLWSLGVLCYEFLVGMPPFEAHTYQE 217
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 118/266 (44%), Gaps = 32/266 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVRL 229
G+G FG VY + + S +A+K L + + E + + EV + H N++RL
Sbjct: 43 GKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
G+ + L+ E+ GT+ L K ++A L Y H S ++I
Sbjct: 100 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVI 156
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DIKP+N+LL +I+DFG +++ + + + GT Y+ PE K
Sbjct: 157 HRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEK 212
Query: 350 VDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIK 408
VD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 213 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL- 262
Query: 409 CVEKLLMVSIWCIQEDPSLRPTMRKV 434
+ +LL + +PS RP +R+V
Sbjct: 263 -ISRLL-------KHNPSQRPMLREV 280
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 118/266 (44%), Gaps = 32/266 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVRL 229
G+G FG VY + + S +A+K L + + E + + EV + H N++RL
Sbjct: 20 GKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
G+ + L+ E+ GT+ L K ++A L Y H S ++I
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVI 133
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DIKP+N+LL +I+DFG +++ + + + GT Y+ PE K
Sbjct: 134 HRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEK 189
Query: 350 VDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIK 408
VD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL- 239
Query: 409 CVEKLLMVSIWCIQEDPSLRPTMRKV 434
+ +LL + +PS RP +R+V
Sbjct: 240 -ISRLL-------KHNPSQRPMLREV 257
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 94/195 (48%), Gaps = 18/195 (9%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+G FG V G R + AV K D Q F E V+ Q H NLV+LLG
Sbjct: 21 GKGEFGDVMLG---DYRGNKVAVKCIKNDATAQ----AFLAEASVMTQLRHSNLVQLLGV 73
Query: 233 CDEGQNRL-LVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
E + L +V E++ G+L +L G + + + + YL + +
Sbjct: 74 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFV 130
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H D+ +N+L+ + A++SDFGL K + Q T K ++ + APE R++ + K
Sbjct: 131 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-TGKLPVK----WTAPEALREAAFSTK 185
Query: 350 VDVYSFGVLLLEIIS 364
DV+SFG+LL EI S
Sbjct: 186 SDVWSFGILLWEIYS 200
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 118/276 (42%), Gaps = 28/276 (10%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKNLVRLLG 231
G G FG V++G+ + AVA+K D +E F E + + Q H ++V+L+G
Sbjct: 19 GEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG 78
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI--AFQIARGLLYLHEDCSSQII 289
E ++ E G L SFL K S +L + I A+Q++ L YL S + +
Sbjct: 79 VITENPV-WIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKG--YVAPEWYRKSTIT 347
H DI +N+L+ ++ DFGL++ + + T A +G ++APE T
Sbjct: 134 HRDIAARNVLVSATDCVKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
+ DV+ FGV + EI+ + F +N + +E
Sbjct: 191 SASDVWMFGVCMWEIL---------------MHGVKPFQGVKNNDVIGRIENGERLPMPP 235
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVE 443
C L + C DPS RP ++ L ++E
Sbjct: 236 NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 271
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 118/266 (44%), Gaps = 32/266 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVRL 229
G+G FG VY + + S +A+K L + + E + + EV + H N++RL
Sbjct: 20 GKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
G+ + L+ E+ GT+ L K ++A L Y H S ++I
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVI 133
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DIKP+N+LL +I+DFG +++ + + + GT Y+ PE K
Sbjct: 134 HRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEK 189
Query: 350 VDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIK 408
VD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL- 239
Query: 409 CVEKLLMVSIWCIQEDPSLRPTMRKV 434
+ +LL + +PS RP +R+V
Sbjct: 240 -ISRLL-------KHNPSQRPMLREV 257
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 117/268 (43%), Gaps = 27/268 (10%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 226
F +E G G FG+V G VA+K + + E EF E V+ H+ L
Sbjct: 27 TFLKELGTGQFGVVKYG----KWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKL 81
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIARGLLYLHEDC 284
V+L G C + + ++ E++ NG L ++L ++ + + + + + YL
Sbjct: 82 VQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLE--- 137
Query: 285 SSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKS 344
S Q +H D+ +N L++D ++SDFGL++ + L+ +T + + PE S
Sbjct: 138 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEETSSVGSKFPVRWSPPEVLMYS 196
Query: 345 TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAM 404
++K D+++FGVL+ EI S K ++ + N + + + +
Sbjct: 197 KFSSKSDIWAFGVLMWEIYSLGKM---------------PYERFTNSETAEHIAQGLRLY 241
Query: 405 NDIKCVEKLLMVSIWCIQEDPSLRPTMR 432
EK+ + C E RPT +
Sbjct: 242 RPHLASEKVYTIMYSCWHEKADERPTFK 269
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 9/191 (4%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G GS GIV + + S VAVK +D Q + NEVV++ H N+V +
Sbjct: 54 GEGSTGIV---CLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKS 110
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCD 292
G+ ++ EFL G L + ++ + + + + L YLH + +IH D
Sbjct: 111 YLVGEELWVLMEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQALAYLH---AQGVIHRD 166
Query: 293 IKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDV 352
IK +ILL ++SDFG ++ + K + + GT ++APE +S +VD+
Sbjct: 167 IKSDSILLTLDGRVKLSDFGFCAQISKDVPK--RKXLVGTPYWMAPEVISRSLYATEVDI 224
Query: 353 YSFGVLLLEII 363
+S G++++E++
Sbjct: 225 WSLGIMVIEMV 235
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 120/271 (44%), Gaps = 33/271 (12%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 226
F +E G G FG+V G VA+K + + E EF E V+ H+ L
Sbjct: 12 TFLKELGTGQFGVVKYG----KWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKL 66
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIARGLLYLHEDC 284
V+L G C + + ++ E++ NG L ++L ++ + + + + + YL
Sbjct: 67 VQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLE--- 122
Query: 285 SSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK---GYVAPEWY 341
S Q +H D+ +N L++D ++SDFGL++ + ++ T+ RG+K + PE
Sbjct: 123 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY----TSSRGSKFPVRWSPPEVL 178
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDM 401
S ++K D+++FGVL+ EI S K ++ + N + + + +
Sbjct: 179 MYSKFSSKSDIWAFGVLMWEIYSLGKM---------------PYERFTNSETAEHIAQGL 223
Query: 402 EAMNDIKCVEKLLMVSIWCIQEDPSLRPTMR 432
EK+ + C E RPT +
Sbjct: 224 RLYRPHLASEKVYTIMYSCWHEKADERPTFK 254
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 93/195 (47%), Gaps = 18/195 (9%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+G FG V G R + AV K D Q F E V+ Q H NLV+LLG
Sbjct: 30 GKGEFGDVMLG---DYRGNKVAVKCIKNDATAQ----AFLAEASVMTQLRHSNLVQLLGV 82
Query: 233 CDEGQNRL-LVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
E + L +V E++ G+L +L G + + + + YL + +
Sbjct: 83 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFV 139
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H D+ +N+L+ + A++SDFGL K + Q T K ++ + APE R+ + K
Sbjct: 140 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-TGKLPVK----WTAPEALREKKFSTK 194
Query: 350 VDVYSFGVLLLEIIS 364
DV+SFG+LL EI S
Sbjct: 195 SDVWSFGILLWEIYS 209
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 93/195 (47%), Gaps = 18/195 (9%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+G FG V G R + AV K D Q F E V+ Q H NLV+LLG
Sbjct: 202 GKGEFGDVMLG---DYRGNKVAVKCIKNDATAQ----AFLAEASVMTQLRHSNLVQLLGV 254
Query: 233 CDEGQNRL-LVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
E + L +V E++ G+L +L G + + + + YL + +
Sbjct: 255 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFV 311
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H D+ +N+L+ + A++SDFGL K + Q T K ++ T APE R+ + K
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-TGKLPVKWT----APEALREKKFSTK 366
Query: 350 VDVYSFGVLLLEIIS 364
DV+SFG+LL EI S
Sbjct: 367 SDVWSFGILLWEIYS 381
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 118/276 (42%), Gaps = 28/276 (10%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKNLVRLLG 231
G G FG V++G+ + AVA+K D +E F E + + Q H ++V+L+G
Sbjct: 399 GEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG 458
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI--AFQIARGLLYLHEDCSSQII 289
E ++ E G L SFL K S +L + I A+Q++ L YL S + +
Sbjct: 459 VITENPV-WIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLE---SKRFV 513
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK--GYVAPEWYRKSTIT 347
H DI +N+L+ ++ DFGL++ + + T A +G ++APE T
Sbjct: 514 HRDIAARNVLVSATDCVKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
+ DV+ FGV + EI+ + F +N + +E
Sbjct: 571 SASDVWMFGVCMWEIL---------------MHGVKPFQGVKNNDVIGRIENGERLPMPP 615
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVE 443
C L + C DPS RP ++ L ++E
Sbjct: 616 NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 119/266 (44%), Gaps = 24/266 (9%)
Query: 173 GRGSFGIVYKGV-IETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 230
G G+FG VYKG+ I VA+K L + KE +E V+ + RLL
Sbjct: 26 GSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLL 85
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKP--SWNLRTNIAFQIARGLLYLHEDCSSQI 288
G C +L V + + G L + N S +L N QIA+G+ YL + ++
Sbjct: 86 GICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDL-LNWCMQIAKGMSYLED---VRL 140
Query: 289 IHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITA 348
+H D+ +N+L+ + +I+DFGLA+LL +++++ + ++A E + T
Sbjct: 141 VHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTH 200
Query: 349 KVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIK 408
+ DV+S+GV + E+++ +D ++ DL+E
Sbjct: 201 QSDVWSYGVTVWELMTFGAK---------------PYDGIPAREIPDLLEKGERLPQPPI 245
Query: 409 CVEKLLMVSIWCIQEDPSLRPTMRKV 434
C + M+ + C D RP R++
Sbjct: 246 CTIDVYMIMVKCWMIDSECRPRFREL 271
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 93/195 (47%), Gaps = 18/195 (9%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+G FG V G R + AV K D Q F E V+ Q H NLV+LLG
Sbjct: 15 GKGEFGDVMLG---DYRGNKVAVKCIKNDATAQ----AFLAEASVMTQLRHSNLVQLLGV 67
Query: 233 CDEGQNRL-LVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
E + L +V E++ G+L +L G + + + + YL + +
Sbjct: 68 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFV 124
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H D+ +N+L+ + A++SDFGL K + Q T K ++ T APE R+ + K
Sbjct: 125 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-TGKLPVKWT----APEALREKKFSTK 179
Query: 350 VDVYSFGVLLLEIIS 364
DV+SFG+LL EI S
Sbjct: 180 SDVWSFGILLWEIYS 194
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 8/201 (3%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G GSFG V TT + K D + + E+ + H ++++L
Sbjct: 17 GEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV 76
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCD 292
++V E+ N L ++ K S QI + Y H +I+H D
Sbjct: 77 IKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR---HKIVHRD 132
Query: 293 IKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR-KSTITAKVD 351
+KP+N+LLD+H N +I+DFGL+ ++T +KT+ G+ Y APE K +VD
Sbjct: 133 LKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKTSC-GSPNYAAPEVISGKLYAGPEVD 189
Query: 352 VYSFGVLLLEIISCRKSFDIE 372
V+S GV+L ++ R FD E
Sbjct: 190 VWSCGVILYVMLCRRLPFDDE 210
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 8/201 (3%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G GSFG V TT + K D + + E+ + H ++++L
Sbjct: 23 GEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV 82
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCD 292
++V E+ N L ++ K S QI + Y H +I+H D
Sbjct: 83 IKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR---HKIVHRD 138
Query: 293 IKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR-KSTITAKVD 351
+KP+N+LLD+H N +I+DFGL+ ++T +KT+ G+ Y APE K +VD
Sbjct: 139 LKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKTSC-GSPNYAAPEVISGKLYAGPEVD 195
Query: 352 VYSFGVLLLEIISCRKSFDIE 372
V+S GV+L ++ R FD E
Sbjct: 196 VWSCGVILYVMLCRRLPFDDE 216
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 8/201 (3%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G GSFG V TT + K D + + E+ + H ++++L
Sbjct: 13 GEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV 72
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCD 292
++V E+ N L ++ K S QI + Y H +I+H D
Sbjct: 73 IKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR---HKIVHRD 128
Query: 293 IKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR-KSTITAKVD 351
+KP+N+LLD+H N +I+DFGL+ ++T +KT+ G+ Y APE K +VD
Sbjct: 129 LKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKTSC-GSPNYAAPEVISGKLYAGPEVD 185
Query: 352 VYSFGVLLLEIISCRKSFDIE 372
V+S GV+L ++ R FD E
Sbjct: 186 VWSCGVILYVMLCRRLPFDDE 206
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 8/201 (3%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G GSFG V TT + K D + + E+ + H ++++L
Sbjct: 22 GEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV 81
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCD 292
++V E+ N L ++ K S QI + Y H +I+H D
Sbjct: 82 IKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR---HKIVHRD 137
Query: 293 IKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR-KSTITAKVD 351
+KP+N+LLD+H N +I+DFGL+ ++T +KT+ G+ Y APE K +VD
Sbjct: 138 LKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKTSC-GSPNYAAPEVISGKLYAGPEVD 194
Query: 352 VYSFGVLLLEIISCRKSFDIE 372
V+S GV+L ++ R FD E
Sbjct: 195 VWSCGVILYVMLCRRLPFDDE 215
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 116/268 (43%), Gaps = 27/268 (10%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 226
F +E G G FG+V G VA+K + + E EF E V+ H+ L
Sbjct: 27 TFLKELGTGQFGVVKYG----KWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKL 81
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIARGLLYLHEDC 284
V+L G C + + ++ E++ NG L ++L ++ + + + + + YL
Sbjct: 82 VQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLE--- 137
Query: 285 SSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKS 344
S Q +H D+ +N L++D ++SDFGL++ + L+ T + + PE S
Sbjct: 138 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYS 196
Query: 345 TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAM 404
++K D+++FGVL+ EI S K ++ + N + + + +
Sbjct: 197 KFSSKSDIWAFGVLMWEIYSLGKM---------------PYERFTNSETAEHIAQGLRLY 241
Query: 405 NDIKCVEKLLMVSIWCIQEDPSLRPTMR 432
EK+ + C E RPT +
Sbjct: 242 RPHLASEKVYTIMYSCWHEKADERPTFK 269
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 111/224 (49%), Gaps = 20/224 (8%)
Query: 165 TDNFKEEA--GRGSFGIVYKGVIETTRTSTTAVAVKKLDR--VFQDGEKE-FKNEVVVIG 219
+D +K + G+GSFG V ++ + + AVK + + V Q +KE EV ++
Sbjct: 31 SDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 87
Query: 220 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLY 279
Q H N+++L F ++ LV E G L + + S I Q+ G+ Y
Sbjct: 88 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITY 147
Query: 280 LHEDCSSQIIHCDIKPQNILLDDH---YNARISDFGLAKLLTLNQSKTIKTAIRGTKGYV 336
+H++ +I+H D+KP+N+LL+ N RI DFGL+ SK +K I GT Y+
Sbjct: 148 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKMKDKI-GTAYYI 201
Query: 337 APEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 380
APE T K DV+S GV+L ++S F+ EY IL
Sbjct: 202 APEVLH-GTYDEKCDVWSTGVILYILLSGCPPFN--GANEYDIL 242
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 17/208 (8%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAV-KKLDR-VFQDGEKE-FKNEVVVIGQTHHKNLVRL 229
G GS+G K R S + V K+LD + EK+ +EV ++ + H N+VR
Sbjct: 15 GTGSYGRCQK----IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRY 70
Query: 230 LGFCDEGQNRLL--VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+ N L V E+ G LAS + K L ++ L ++C +
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 288 ------IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
++H D+KP N+ LD N ++ DFGLA++ LN + A GT Y++PE
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDTSFAKAFVGTPYYMSPEQM 188
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRKSF 369
+ + K D++S G LL E+ + F
Sbjct: 189 NRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 116/268 (43%), Gaps = 27/268 (10%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 226
F +E G G FG+V G VA+K + + E EF E V+ H+ L
Sbjct: 18 TFLKELGTGQFGVVKYG----KWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKL 72
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIARGLLYLHEDC 284
V+L G C + + ++ E++ NG L ++L ++ + + + + + YL
Sbjct: 73 VQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLE--- 128
Query: 285 SSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKS 344
S Q +H D+ +N L++D ++SDFGL++ + L+ T + + PE S
Sbjct: 129 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYS 187
Query: 345 TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAM 404
++K D+++FGVL+ EI S K ++ + N + + + +
Sbjct: 188 KFSSKSDIWAFGVLMWEIYSLGKM---------------PYERFTNSETAEHIAQGLRLY 232
Query: 405 NDIKCVEKLLMVSIWCIQEDPSLRPTMR 432
EK+ + C E RPT +
Sbjct: 233 RPHLASEKVYTIMYSCWHEKADERPTFK 260
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 116/268 (43%), Gaps = 27/268 (10%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 226
F +E G G FG+V G VA+K + + E EF E V+ H+ L
Sbjct: 11 TFLKELGTGQFGVVKYG----KWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKL 65
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIARGLLYLHEDC 284
V+L G C + + ++ E++ NG L ++L ++ + + + + + YL
Sbjct: 66 VQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLE--- 121
Query: 285 SSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKS 344
S Q +H D+ +N L++D ++SDFGL++ + L+ T + + PE S
Sbjct: 122 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYS 180
Query: 345 TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAM 404
++K D+++FGVL+ EI S K ++ + N + + + +
Sbjct: 181 KFSSKSDIWAFGVLMWEIYSLGKM---------------PYERFTNSETAEHIAQGLRLY 225
Query: 405 NDIKCVEKLLMVSIWCIQEDPSLRPTMR 432
EK+ + C E RPT +
Sbjct: 226 RPHLASEKVYTIMYSCWHEKADERPTFK 253
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 116/268 (43%), Gaps = 27/268 (10%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 226
F +E G G FG+V G VA+K + + E EF E V+ H+ L
Sbjct: 12 TFLKELGTGQFGVVKYG----KWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKL 66
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIARGLLYLHEDC 284
V+L G C + + ++ E++ NG L ++L ++ + + + + + YL
Sbjct: 67 VQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLE--- 122
Query: 285 SSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKS 344
S Q +H D+ +N L++D ++SDFGL++ + L+ T + + PE S
Sbjct: 123 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYS 181
Query: 345 TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAM 404
++K D+++FGVL+ EI S K ++ + N + + + +
Sbjct: 182 KFSSKSDIWAFGVLMWEIYSLGKM---------------PYERFTNSETAEHIAQGLRLY 226
Query: 405 NDIKCVEKLLMVSIWCIQEDPSLRPTMR 432
EK+ + C E RPT +
Sbjct: 227 RPHLASEKVYTIMYSCWHEKADERPTFK 254
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 116/268 (43%), Gaps = 27/268 (10%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 226
F +E G G FG+V G VA+K + + E EF E V+ H+ L
Sbjct: 7 TFLKELGTGQFGVVKYG----KWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKL 61
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIARGLLYLHEDC 284
V+L G C + + ++ E++ NG L ++L ++ + + + + + YL
Sbjct: 62 VQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLE--- 117
Query: 285 SSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKS 344
S Q +H D+ +N L++D ++SDFGL++ + L+ T + + PE S
Sbjct: 118 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYS 176
Query: 345 TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAM 404
++K D+++FGVL+ EI S K ++ + N + + + +
Sbjct: 177 KFSSKSDIWAFGVLMWEIYSLGKM---------------PYERFTNSETAEHIAQGLRLY 221
Query: 405 NDIKCVEKLLMVSIWCIQEDPSLRPTMR 432
EK+ + C E RPT +
Sbjct: 222 RPHLASEKVYTIMYSCWHEKADERPTFK 249
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 13/207 (6%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVRL 229
G+G FG VY + R S +A+K L + + E + + EV + H N++RL
Sbjct: 21 GKGKFGNVY---LARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
G+ + L+ E+ GT+ L + ++A L Y H S ++I
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCH---SKRVI 134
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DIKP+N+LL + +I+DFG +++ + + + GT Y+ PE K
Sbjct: 135 HRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEK 190
Query: 350 VDVYSFGVLLLEIISCRKSFDIEMGEE 376
VD++S GVL E + F+ +E
Sbjct: 191 VDLWSLGVLCYEFLVGMPPFEAHTYQE 217
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 138/310 (44%), Gaps = 27/310 (8%)
Query: 142 NSPGDGTVETNLRCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTST-TAVAVKKL 200
PGD TV F + L++ D G G FG V + T T VAVK L
Sbjct: 20 QGPGDPTV------FHKRYLKKIRD-----LGEGHFGKVSLYCYDPTNDGTGEMVAVKAL 68
Query: 201 DRVFQDGEKE-FKNEVVVIGQTHHKNLVRLLGFC-DEGQNRL-LVYEFLNNGTLASFLFG 257
+ +K E+ ++ +H+++++ G C D G L LV E++ G+L +L
Sbjct: 69 KADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL-- 126
Query: 258 NLKPSWNLRTNIAF--QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAK 315
+ S L + F QI G+ YLH + IH D+ +N+LLD+ +I DFGLAK
Sbjct: 127 -PRHSIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAK 182
Query: 316 LLTL-NQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIIS-CRKSFDIEM 373
+ ++ ++ + APE ++ DV+SFGV L E+++ C S
Sbjct: 183 AVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPT 242
Query: 374 GEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRK 433
++ L A +L +L+E KC ++ + C + + S RPT
Sbjct: 243 --KFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFEN 300
Query: 434 VSQMLEGVVE 443
+ +L+ V E
Sbjct: 301 LIPILKTVHE 310
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 32/213 (15%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKE-----FKNEVVVIGQTHHK 224
E+ G G++G+VYK R VA+K R+ D E E E+ ++ + HH
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRI----VALK---RIRLDAEDEGIPSTAIREISLLKELHHP 79
Query: 225 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI-AFQIARGLLYLHED 283
N+V L+ + LV+EF+ L L N + + I +Q+ RG+ + H+
Sbjct: 80 NIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ- 137
Query: 284 CSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRK 343
+I+H D+KPQN+L++ +++DFGLA+ + +R V WYR
Sbjct: 138 --HRILHRDLKPQNLLINSDGALKLADFGLARAFGI--------PVRSYTHEVVTLWYRA 187
Query: 344 STI-------TAKVDVYSFGVLLLEIISCRKSF 369
+ + VD++S G + E+I+ + F
Sbjct: 188 PDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLF 220
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 88/189 (46%), Gaps = 22/189 (11%)
Query: 209 KEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN 268
+E NE+ ++ H N+++L ++ + LV EF G L + K N
Sbjct: 91 EEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAAN 150
Query: 269 IAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDH---YNARISDFGLAKLLTLNQSKTI 325
I QI G+ YLH+ I+H DIKP+NILL++ N +I DFGL+ SK
Sbjct: 151 IMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF----SKDY 203
Query: 326 KTAIR-GTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSF----------DIEMG 374
K R GT Y+APE +K K DV+S GV++ ++ F +E G
Sbjct: 204 KLRDRLGTAYYIAPEVLKKK-YNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKG 262
Query: 375 EEYAILTDW 383
+ Y DW
Sbjct: 263 KYYFDFNDW 271
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 107/227 (47%), Gaps = 21/227 (9%)
Query: 162 EEATDNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK-----EFKNE 214
E+ D+++ EE G G F IV K + T A +KK R + E + E
Sbjct: 8 EDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKK--RRLSSSRRGVSREEIERE 65
Query: 215 VVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIA 274
V ++ + H N++ L + + +L+ E ++ G L FL + + T QI
Sbjct: 66 VNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQIL 125
Query: 275 RGLLYLHEDCSSQIIHCDIKPQNILLDDHY--NARIS--DFGLA-KLLTLNQSKTIKTAI 329
G+ YLH S +I H D+KP+NI+L D N RI DFG+A K+ N+ K I
Sbjct: 126 DGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNI---- 178
Query: 330 RGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE 376
GT +VAPE + + D++S GV+ ++S F E +E
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE 225
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 32/213 (15%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKE-----FKNEVVVIGQTHHK 224
E+ G G++G+VYK R VA+K R+ D E E E+ ++ + HH
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRI----VALK---RIRLDAEDEGIPSTAIREISLLKELHHP 79
Query: 225 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI-AFQIARGLLYLHED 283
N+V L+ + LV+EF+ L L N + + I +Q+ RG+ + H+
Sbjct: 80 NIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ- 137
Query: 284 CSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRK 343
+I+H D+KPQN+L++ +++DFGLA+ + +R V WYR
Sbjct: 138 --HRILHRDLKPQNLLINSDGALKLADFGLARAFGI--------PVRSYTHEVVTLWYRA 187
Query: 344 STI-------TAKVDVYSFGVLLLEIISCRKSF 369
+ + VD++S G + E+I+ + F
Sbjct: 188 PDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLF 220
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 106/214 (49%), Gaps = 18/214 (8%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDR--VFQDGEKE-FKNEVVVIGQTHHKNLVRL 229
G+GSFG V ++ + + AVK + + V Q +KE EV ++ Q H N+++L
Sbjct: 35 GKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 91
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
F ++ LV E G L + + S I Q+ G+ Y+H++ +I+
Sbjct: 92 YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIV 148
Query: 290 HCDIKPQNILLDDH---YNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTI 346
H D+KP+N+LL+ N RI DFGL+ SK +K I GT Y+APE T
Sbjct: 149 HRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKMKDKI-GTAYYIAPEVLH-GTY 204
Query: 347 TAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 380
K DV+S GV+L ++S F+ EY IL
Sbjct: 205 DEKCDVWSTGVILYILLSGCPPFN--GANEYDIL 236
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 119/267 (44%), Gaps = 26/267 (9%)
Query: 173 GRGSFGIVYKGV-IETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 230
G G+FG VYKG+ I VA+K+L + KE +E V+ + ++ RLL
Sbjct: 28 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 87
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
G C +L++ + + G L ++ N+ + L N QIA+G+ YL + +
Sbjct: 88 GICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---RR 141
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
++H D+ +N+L+ + +I+DFGLAKLL + + + ++A E T
Sbjct: 142 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 201
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
+ DV+S+GV + E+++ +D ++ ++E
Sbjct: 202 HQSDVWSYGVTVWELMTFGSK---------------PYDGIPASEISSILEKGERLPQPP 246
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKV 434
C + M+ + C D RP R++
Sbjct: 247 ICTIDVYMIMVKCWMIDADSRPKFREL 273
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 100/214 (46%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 38 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 95 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 149
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ TA T GYVA WYR
Sbjct: 150 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTADEMT-GYVATRWYR 196
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 100/214 (46%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 38 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 95 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 149
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ TA T GYVA WYR
Sbjct: 150 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTADEMT-GYVATRWYR 196
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 119/267 (44%), Gaps = 26/267 (9%)
Query: 173 GRGSFGIVYKGV-IETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 230
G G+FG VYKG+ I VA+K+L + KE +E V+ + ++ RLL
Sbjct: 27 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 86
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
G C +L++ + + G L ++ N+ + L N QIA+G+ YL + +
Sbjct: 87 GICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---RR 140
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
++H D+ +N+L+ + +I+DFGLAKLL + + + ++A E T
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 200
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
+ DV+S+GV + E+++ +D ++ ++E
Sbjct: 201 HQSDVWSYGVTVWELMTFGSK---------------PYDGIPASEISSILEKGERLPQPP 245
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKV 434
C + M+ + C D RP R++
Sbjct: 246 ICTIDVYMIMVKCWMIDADSRPKFREL 272
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 119/267 (44%), Gaps = 26/267 (9%)
Query: 173 GRGSFGIVYKGV-IETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 230
G G+FG VYKG+ I VA+K+L + KE +E V+ + ++ RLL
Sbjct: 26 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 85
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
G C +L++ + + G L ++ N+ + L N QIA+G+ YL + +
Sbjct: 86 GICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---RR 139
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
++H D+ +N+L+ + +I+DFGLAKLL + + + ++A E T
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 199
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
+ DV+S+GV + E+++ +D ++ ++E
Sbjct: 200 HQSDVWSYGVTVWELMTFGSK---------------PYDGIPASEISSILEKGERLPQPP 244
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKV 434
C + M+ + C D RP R++
Sbjct: 245 ICTIDVYMIMVKCWMIDADSRPKFREL 271
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 119/267 (44%), Gaps = 26/267 (9%)
Query: 173 GRGSFGIVYKGV-IETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 230
G G+FG VYKG+ I VA+K+L + KE +E V+ + ++ RLL
Sbjct: 25 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 84
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
G C +L++ + + G L ++ N+ + L N QIA+G+ YL + +
Sbjct: 85 GICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---RR 138
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
++H D+ +N+L+ + +I+DFGLAKLL + + + ++A E T
Sbjct: 139 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 198
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
+ DV+S+GV + E+++ +D ++ ++E
Sbjct: 199 HQSDVWSYGVTVWELMTFGSK---------------PYDGIPASEISSILEKGERLPQPP 243
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKV 434
C + M+ + C D RP R++
Sbjct: 244 ICTIDVYMIMVKCWMIDADSRPKFREL 270
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 94/204 (46%), Gaps = 20/204 (9%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKN 225
F E GRGSF VYKG+ T T+ + DR E++ FK E + H N
Sbjct: 29 KFDIEIGRGSFKTVYKGL--DTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPN 86
Query: 226 LVRLLGFCDEGQNR-------LLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLL 278
+VR F D ++ +LV E +GTL ++L + + QI +GL
Sbjct: 87 IVR---FYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQ 143
Query: 279 YLHEDCSSQIIHCDIKPQNILLDDHYNA-RISDFGLAKLLTLNQSKTIKTAIRGTKGYVA 337
+LH + IIH D+K NI + + +I D GLA L + + A+ GT + A
Sbjct: 144 FLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL----KRASFAKAVIGTPEFXA 198
Query: 338 PEWYRKSTITAKVDVYSFGVLLLE 361
PE Y + VDVY+FG LE
Sbjct: 199 PEXYEEK-YDESVDVYAFGXCXLE 221
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 100/214 (46%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 38 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 95 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 149
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ TA T GYVA WYR
Sbjct: 150 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTADEMT-GYVATRWYR 196
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 119/267 (44%), Gaps = 26/267 (9%)
Query: 173 GRGSFGIVYKGV-IETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 230
G G+FG VYKG+ I VA+K+L + KE +E V+ + ++ RLL
Sbjct: 25 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 84
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
G C +L++ + + G L ++ N+ + L N QIA+G+ YL + +
Sbjct: 85 GICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---RR 138
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
++H D+ +N+L+ + +I+DFGLAKLL + + + ++A E T
Sbjct: 139 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 198
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
+ DV+S+GV + E+++ +D ++ ++E
Sbjct: 199 HQSDVWSYGVTVWELMTFGSK---------------PYDGIPASEISSILEKGERLPQPP 243
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKV 434
C + M+ + C D RP R++
Sbjct: 244 ICTIDVYMIMVKCWMIDADSRPKFREL 270
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 106/214 (49%), Gaps = 18/214 (8%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDR--VFQDGEKE-FKNEVVVIGQTHHKNLVRL 229
G+GSFG V ++ + + AVK + + V Q +KE EV ++ Q H N+++L
Sbjct: 58 GKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 114
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
F ++ LV E G L + + S I Q+ G+ Y+H++ +I+
Sbjct: 115 YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIV 171
Query: 290 HCDIKPQNILLDDH---YNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTI 346
H D+KP+N+LL+ N RI DFGL+ SK +K I GT Y+APE T
Sbjct: 172 HRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKMKDKI-GTAYYIAPEVLH-GTY 227
Query: 347 TAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 380
K DV+S GV+L ++S F+ EY IL
Sbjct: 228 DEKCDVWSTGVILYILLSGCPPFN--GANEYDIL 259
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 106/214 (49%), Gaps = 18/214 (8%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDR--VFQDGEKE-FKNEVVVIGQTHHKNLVRL 229
G+GSFG V ++ + + AVK + + V Q +KE EV ++ Q H N+++L
Sbjct: 59 GKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 115
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
F ++ LV E G L + + S I Q+ G+ Y+H++ +I+
Sbjct: 116 YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIV 172
Query: 290 HCDIKPQNILLDDH---YNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTI 346
H D+KP+N+LL+ N RI DFGL+ SK +K I GT Y+APE T
Sbjct: 173 HRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKMKDKI-GTAYYIAPEVLH-GTY 228
Query: 347 TAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 380
K DV+S GV+L ++S F+ EY IL
Sbjct: 229 DEKCDVWSTGVILYILLSGCPPFN--GANEYDIL 260
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 100/197 (50%), Gaps = 11/197 (5%)
Query: 173 GRGSFGIVYKGV-IETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 230
G G+FG VYKG+ I VA+K+L + KE +E V+ + ++ RLL
Sbjct: 24 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 83
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
G C +L++ + + G L ++ N+ + L N QIA+G+ YL + +
Sbjct: 84 GICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---RR 137
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
++H D+ +N+L+ + +I+DFGLAKLL + + + ++A E T
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 197
Query: 348 AKVDVYSFGVLLLEIIS 364
+ DV+S+GV + E+++
Sbjct: 198 HQSDVWSYGVTVWELMT 214
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 29/212 (13%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE---KEFKNEVVVIGQTHHKNL 226
E+ G G++G V+K R + VA+K++ R+ D E E+ ++ + HKN+
Sbjct: 8 EKIGEGTYGTVFKA---KNRETHEIVALKRV-RLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASF--LFGNLKPSWNLRTNIAFQIARGLLYLHEDC 284
VRL + LV+EF + F G+L P + + FQ+ +GL + H
Sbjct: 64 VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPE--IVKSFLFQLLKGLGFCH--- 118
Query: 285 SSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKS 344
S ++H D+KPQN+L++ + +++DFGLA+ + +R V WYR
Sbjct: 119 SRNVLHRDLKPQNLLINRNGELKLADFGLARAFGI--------PVRCYSAEVVTLWYRPP 170
Query: 345 TI-------TAKVDVYSFGVLLLEIISCRKSF 369
+ + +D++S G + E+ + +
Sbjct: 171 DVLFGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 118/267 (44%), Gaps = 26/267 (9%)
Query: 173 GRGSFGIVYKGV-IETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 230
G G+FG VYKG+ I VA+K+L + KE +E V+ + ++ RLL
Sbjct: 49 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 108
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
G C +L+ + + G L ++ N+ + L N QIA+G+ YL + +
Sbjct: 109 GICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---RR 162
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
++H D+ +N+L+ + +I+DFGLAKLL + + + ++A E T
Sbjct: 163 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 222
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
+ DV+S+GV + E+++ +D ++ ++E
Sbjct: 223 HQSDVWSYGVTVWELMTFGSK---------------PYDGIPASEISSILEKGERLPQPP 267
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKV 434
C + M+ + C D RP R++
Sbjct: 268 ICTIDVYMIMVKCWMIDADSRPKFREL 294
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 120/267 (44%), Gaps = 26/267 (9%)
Query: 173 GRGSFGIVYKGV-IETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 230
G G+FG VYKG+ I VA+K+L + KE +E V+ + ++ RLL
Sbjct: 24 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 83
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
G C +L+ + + G L ++ N+ + L N QIA+G+ YL + +
Sbjct: 84 GICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---RR 137
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
++H D+ +N+L+ + +I+DFGLAKLL + + + ++A E T
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 197
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
+ DV+S+GV + E+++ G + +D ++ ++E
Sbjct: 198 HQSDVWSYGVTVWELMT--------FGSK-------PYDGIPASEISSILEKGERLPQPP 242
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKV 434
C + M+ + C D RP R++
Sbjct: 243 ICTIDVYMIMVKCWMIDADSRPKFREL 269
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 118/267 (44%), Gaps = 26/267 (9%)
Query: 173 GRGSFGIVYKGV-IETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 230
G G+FG VYKG+ I VA+K+L + KE +E V+ + ++ RLL
Sbjct: 27 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 86
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
G C +L+ + + G L ++ N+ + L N QIA+G+ YL + +
Sbjct: 87 GICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---RR 140
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
++H D+ +N+L+ + +I+DFGLAKLL + + + ++A E T
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 200
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
+ DV+S+GV + E+++ +D ++ ++E
Sbjct: 201 HQSDVWSYGVTVWELMTFGSK---------------PYDGIPASEISSILEKGERLPQPP 245
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKV 434
C + M+ + C D RP R++
Sbjct: 246 ICTIDVYMIMVKCWMIDADSRPKFREL 272
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 118/267 (44%), Gaps = 26/267 (9%)
Query: 173 GRGSFGIVYKGV-IETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 230
G G+FG VYKG+ I VA+K+L + KE +E V+ + ++ RLL
Sbjct: 24 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 83
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
G C +L+ + + G L ++ N+ + L N QIA+G+ YL + +
Sbjct: 84 GICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---RR 137
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
++H D+ +N+L+ + +I+DFGLAKLL + + + ++A E T
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 197
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
+ DV+S+GV + E+++ +D ++ ++E
Sbjct: 198 HQSDVWSYGVTVWELMTFGSK---------------PYDGIPASEISSILEKGERLPQPP 242
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKV 434
C + M+ + C D RP R++
Sbjct: 243 ICTIDVYMIMVKCWMIDADSRPKFREL 269
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 118/267 (44%), Gaps = 26/267 (9%)
Query: 173 GRGSFGIVYKGV-IETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 230
G G+FG VYKG+ I VA+K+L + KE +E V+ + ++ RLL
Sbjct: 26 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 85
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
G C +L+ + + G L ++ N+ + L N QIA+G+ YL + +
Sbjct: 86 GICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---RR 139
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
++H D+ +N+L+ + +I+DFGLAKLL + + + ++A E T
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 199
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
+ DV+S+GV + E+++ +D ++ ++E
Sbjct: 200 HQSDVWSYGVTVWELMTFGSK---------------PYDGIPASEISSILEKGERLPQPP 244
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKV 434
C + M+ + C D RP R++
Sbjct: 245 ICTIDVYMIMVKCWMIDADSRPKFREL 271
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 118/267 (44%), Gaps = 26/267 (9%)
Query: 173 GRGSFGIVYKGV-IETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 230
G G+FG VYKG+ I VA+K+L + KE +E V+ + ++ RLL
Sbjct: 27 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 86
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
G C +L+ + + G L ++ N+ + L N QIA+G+ YL + +
Sbjct: 87 GICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---RR 140
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
++H D+ +N+L+ + +I+DFGLAKLL + + + ++A E T
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 200
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
+ DV+S+GV + E+++ +D ++ ++E
Sbjct: 201 HQSDVWSYGVTVWELMTFGSK---------------PYDGIPASEISSILEKGERLPQPP 245
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKV 434
C + M+ + C D RP R++
Sbjct: 246 ICTIDVYMIMVKCWMIDADSRPKFREL 272
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 120/267 (44%), Gaps = 26/267 (9%)
Query: 173 GRGSFGIVYKGV-IETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 230
G G+FG VYKG+ I VA+K+L + KE +E V+ + ++ RLL
Sbjct: 18 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 77
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
G C +L+ + + G L ++ N+ + L N QIA+G+ YL + +
Sbjct: 78 GICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---RR 131
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
++H D+ +N+L+ + +I+DFGLAKLL + + + ++A E T
Sbjct: 132 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 191
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
+ DV+S+GV + E+++ G + +D ++ ++E
Sbjct: 192 HQSDVWSYGVTVWELMT--------FGSK-------PYDGIPASEISSILEKGERLPQPP 236
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKV 434
C + M+ + C D RP R++
Sbjct: 237 ICTIDVYMIMVKCWMIDADSRPKFREL 263
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 13/202 (6%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRV---FQDGEKEFKNEVVVIGQTHHKNLVRL 229
G G+FG V G E T VAVK L+R D + + E+ + H ++++L
Sbjct: 25 GVGTFGKVKVGKHELT---GHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ +V E+++ G L ++ N + + QI G+ Y H ++
Sbjct: 82 YQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHR---HMVV 138
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITA- 348
H D+KP+N+LLD H NA+I+DFGL+ +++ + ++ + G+ Y APE
Sbjct: 139 HRDLKPENVLLDAHMNAKIADFGLSNMMS--DGEFLRXSC-GSPNYAAPEVISGRLYAGP 195
Query: 349 KVDVYSFGVLLLEIISCRKSFD 370
+VD++S GV+L ++ FD
Sbjct: 196 EVDIWSSGVILYALLCGTLPFD 217
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 99/197 (50%), Gaps = 11/197 (5%)
Query: 173 GRGSFGIVYKGV-IETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 230
G G+FG VYKG+ I VA+K+L + KE +E V+ + ++ RLL
Sbjct: 34 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 93
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
G C +L+ + + G L ++ N+ + L N QIA+G+ YL + +
Sbjct: 94 GICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---RR 147
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
++H D+ +N+L+ + +I+DFGLAKLL + + + ++A E T
Sbjct: 148 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 207
Query: 348 AKVDVYSFGVLLLEIIS 364
+ DV+S+GV + E+++
Sbjct: 208 HQSDVWSYGVTVWELMT 224
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 99/197 (50%), Gaps = 11/197 (5%)
Query: 173 GRGSFGIVYKGV-IETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 230
G G+FG VYKG+ I VA+K+L + KE +E V+ + ++ RLL
Sbjct: 27 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 86
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
G C +L+ + + G L ++ N+ + L N QIA+G+ YL + +
Sbjct: 87 GICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---RR 140
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
++H D+ +N+L+ + +I+DFGLAKLL + + + ++A E T
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 200
Query: 348 AKVDVYSFGVLLLEIIS 364
+ DV+S+GV + E+++
Sbjct: 201 HQSDVWSYGVTVWELMT 217
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 13/195 (6%)
Query: 168 FKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNL 226
FKE G G+F V V+ + + AVK + + + E +NE+ V+ + H+N+
Sbjct: 26 FKETLGTGAFSEV---VLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENI 82
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSS 286
V L + + LV + ++ G L + + + + Q+ + YLH
Sbjct: 83 VALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHR---M 139
Query: 287 QIIHCDIKPQNILL---DDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRK 343
I+H D+KP+N+L D+ ISDFGL+K+ + + TA GT GYVAPE +
Sbjct: 140 GIVHRDLKPENLLYYSQDEESKIMISDFGLSKME--GKGDVMSTAC-GTPGYVAPEVLAQ 196
Query: 344 STITAKVDVYSFGVL 358
+ VD +S GV+
Sbjct: 197 KPYSKAVDCWSIGVI 211
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 120/267 (44%), Gaps = 26/267 (9%)
Query: 173 GRGSFGIVYKGV-IETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 230
G G+FG VYKG+ I VA+K+L + KE +E V+ + ++ RLL
Sbjct: 30 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 89
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
G C +L+ + + G L ++ N+ + L N QIA+G+ YL + +
Sbjct: 90 GICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---RR 143
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
++H D+ +N+L+ + +I+DFGLAKLL + + + ++A E T
Sbjct: 144 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 203
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
+ DV+S+GV + E+++ G + +D ++ ++E
Sbjct: 204 HQSDVWSYGVTVWELMT--------FGSK-------PYDGIPASEISSILEKGERLPQPP 248
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKV 434
C + M+ + C D RP R++
Sbjct: 249 ICTIDVYMIMVKCWMIDADSRPKFREL 275
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 118/267 (44%), Gaps = 26/267 (9%)
Query: 173 GRGSFGIVYKGV-IETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 230
G G+FG VYKG+ I VA+K+L + KE +E V+ + ++ RLL
Sbjct: 31 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 90
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
G C +L+ + + G L ++ N+ + L N QIA+G+ YL + +
Sbjct: 91 GICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---RR 144
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
++H D+ +N+L+ + +I+DFGLAKLL + + + ++A E T
Sbjct: 145 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 204
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
+ DV+S+GV + E+++ +D ++ ++E
Sbjct: 205 HQSDVWSYGVTVWELMTFGSK---------------PYDGIPASEISSILEKGERLPQPP 249
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKV 434
C + M+ + C D RP R++
Sbjct: 250 ICTIDVYMIMVKCWMIDADSRPKFREL 276
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 99/197 (50%), Gaps = 11/197 (5%)
Query: 173 GRGSFGIVYKGV-IETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 230
G G+FG VYKG+ I VA+K+L + KE +E V+ + ++ RLL
Sbjct: 24 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 83
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
G C +L+ + + G L ++ N+ + L N QIA+G+ YL + +
Sbjct: 84 GICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---RR 137
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
++H D+ +N+L+ + +I+DFGLAKLL + + + ++A E T
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 197
Query: 348 AKVDVYSFGVLLLEIIS 364
+ DV+S+GV + E+++
Sbjct: 198 HQSDVWSYGVTVWELMT 214
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 17/215 (7%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 229
+E GRG F +V + + ++T A +KK R QD E +E+ V+ K+ R+
Sbjct: 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRR-GQDCRAEILHEIAVLELA--KSCPRV 91
Query: 230 LGFCDEGQNR---LLVYEFLNNGTLASFLFGNLKP--SWNLRTNIAFQIARGLLYLHEDC 284
+ + +N +L+ E+ G + S L S N + QI G+ YLH++
Sbjct: 92 INLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN- 150
Query: 285 SSQIIHCDIKPQNILLDDHY---NARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
I+H D+KPQNILL Y + +I DFG+++ + + ++ I GT Y+APE
Sbjct: 151 --NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR--KIGHACELR-EIMGTPEYLAPEIL 205
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE 376
IT D+++ G++ +++ F E +E
Sbjct: 206 NYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE 240
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 31 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 88 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 143 --SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT-----------GYVATRWYR 189
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 124/278 (44%), Gaps = 28/278 (10%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDR-VFQDGEKEFKNEVVVIGQTHHKNLVRLLG 231
G G FG VY+GV + VAVK + D +++F +E V++ H ++V+L+G
Sbjct: 21 GEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIG 80
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIARGLLYLHEDCSSQII 289
+E + ++ E G L +L N K S + T + + QI + + YL S +
Sbjct: 81 IIEE-EPTWIIMELYPYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYLE---SINCV 135
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DI +NIL+ ++ DFGL++ + ++ + R +++PE T
Sbjct: 136 HRDIAVRNILVASPECVKLGDFGLSRYIE-DEDYYKASVTRLPIKWMSPESINFRRFTTA 194
Query: 350 VDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
DV+ F V + EI+S K F +E + +L K D L + D+
Sbjct: 195 SDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE----------KGDRLPKPDL------ 238
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEVD 445
C L + C DPS RP ++ L V +++
Sbjct: 239 -CPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 275
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKL-DRVFQDG--EKEFKNEVVVIGQTHHKNL 226
EE G G F +V K ++T A +KK + + G ++ + EV ++ + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSS 286
+ L + + +L+ E + G L FL + T QI G+ YLH S
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 287 QIIHCDIKPQNILLDDHY----NARISDFGLAKLLTL-NQSKTIKTAIRGTKGYVAPEWY 341
QI H D+KP+NI+L D +I DFGLA + N+ K I GT +VAPE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IFGTPAFVAPEIV 189
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRKSF 369
+ + D++S GV+ ++S F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 107/228 (46%), Gaps = 17/228 (7%)
Query: 158 YKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD----GEKEFKN 213
++++ E EE G G F IV K + T A +KK R+ +E +
Sbjct: 20 FQSMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKK-RRLXSSRRGVSREEIER 78
Query: 214 EVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQI 273
EV ++ + H N++ L + + +L+ E ++ G L FL + + T QI
Sbjct: 79 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 138
Query: 274 ARGLLYLHEDCSSQIIHCDIKPQNILLDDHY--NARIS--DFGLA-KLLTLNQSKTIKTA 328
G+ YLH S +I H D+KP+NI+L D N RI DFG+A K+ N+ K I
Sbjct: 139 LDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNI--- 192
Query: 329 IRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE 376
GT +VAPE + + D++S GV+ ++S F E +E
Sbjct: 193 -FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE 239
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 168 FKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHK 224
+E G GSFG K + T + VA+K + R D + E+ + H
Sbjct: 13 IRETLGEGSFG---KVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHP 69
Query: 225 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDC 284
++++L + ++V E+ G L ++ + + + QI + Y H
Sbjct: 70 HIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHR-- 126
Query: 285 SSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR-K 343
+I+H D+KP+N+LLDD+ N +I+DFGL+ ++T +KT+ G+ Y APE K
Sbjct: 127 -HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMT--DGNFLKTSC-GSPNYAAPEVINGK 182
Query: 344 STITAKVDVYSFGVLLLEIISCRKSFDIE 372
+VDV+S G++L ++ R FD E
Sbjct: 183 LYAGPEVDVWSCGIVLYVMLVGRLPFDDE 211
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 124/278 (44%), Gaps = 28/278 (10%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDR-VFQDGEKEFKNEVVVIGQTHHKNLVRLLG 231
G G FG VY+GV + VAVK + D +++F +E V++ H ++V+L+G
Sbjct: 33 GEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIG 92
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIARGLLYLHEDCSSQII 289
+E + ++ E G L +L N K S + T + + QI + + YL S +
Sbjct: 93 IIEE-EPTWIIMELYPYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYLE---SINCV 147
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DI +NIL+ ++ DFGL++ + ++ + R +++PE T
Sbjct: 148 HRDIAVRNILVASPECVKLGDFGLSRYIE-DEDYYKASVTRLPIKWMSPESINFRRFTTA 206
Query: 350 VDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
DV+ F V + EI+S K F +E + +L K D L + D+
Sbjct: 207 SDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE----------KGDRLPKPDL------ 250
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEVD 445
C L + C DPS RP ++ L V +++
Sbjct: 251 -CPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 287
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 108/217 (49%), Gaps = 26/217 (11%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLVR 228
++ G G++ VYKG ++ + VA+K++ ++G EV ++ H N+V
Sbjct: 8 DKLGEGTYATVYKG---KSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVT 64
Query: 229 LLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDCSS 286
L ++ LV+E+L+ L +L GN+ N++ + FQ+ RGL Y H
Sbjct: 65 LHDIIHTEKSLTLVFEYLDKD-LKQYLDDCGNIINMHNVKLFL-FQLLRGLAYCHR---Q 119
Query: 287 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTI 346
+++H D+KPQN+L+++ +++DFGLA+ +K+I T + V WYR I
Sbjct: 120 KVLHRDLKPQNLLINERGELKLADFGLAR------AKSIPTKTYDNE--VVTLWYRPPDI 171
Query: 347 -------TAKVDVYSFGVLLLEIISCRKSFDIEMGEE 376
+ ++D++ G + E+ + R F EE
Sbjct: 172 LLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE 208
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 124/278 (44%), Gaps = 28/278 (10%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDR-VFQDGEKEFKNEVVVIGQTHHKNLVRLLG 231
G G FG VY+GV + VAVK + D +++F +E V++ H ++V+L+G
Sbjct: 17 GEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIG 76
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIARGLLYLHEDCSSQII 289
+E + ++ E G L +L N K S + T + + QI + + YL S +
Sbjct: 77 IIEE-EPTWIIMELYPYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYLE---SINCV 131
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DI +NIL+ ++ DFGL++ + ++ + R +++PE T
Sbjct: 132 HRDIAVRNILVASPECVKLGDFGLSRYIE-DEDYYKASVTRLPIKWMSPESINFRRFTTA 190
Query: 350 VDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
DV+ F V + EI+S K F +E + +L K D L + D+
Sbjct: 191 SDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE----------KGDRLPKPDL------ 234
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEVD 445
C L + C DPS RP ++ L V +++
Sbjct: 235 -CPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 271
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 12/213 (5%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 226
+ EE G G+FG+V++ T R + A K + + ++ + E+ + H L
Sbjct: 160 DIHEELGTGAFGVVHR---VTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCS 285
V L ++ +++YEF++ G L + + K S + Q+ +GL ++HE+
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN-- 274
Query: 286 SQIIHCDIKPQNILLDDHYNARIS--DFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRK 343
+H D+KP+NI+ + + DFGL L QS + T GT + APE
Sbjct: 275 -NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEG 330
Query: 344 STITAKVDVYSFGVLLLEIISCRKSFDIEMGEE 376
+ D++S GVL ++S F E +E
Sbjct: 331 KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE 363
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 12/225 (5%)
Query: 164 ATDNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQ 220
DNF+ G+GSFG V ++ T AV V K D + QD + E E ++
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKET-GDLYAVKVLKKDVILQDDDVECTMTEKRILSL 79
Query: 221 THHKNLVRLLGFCDEGQNRLL-VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLY 279
+ + L C + +RL V EF+N G L + + + A +I L++
Sbjct: 80 ARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMF 139
Query: 280 LHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPE 339
LH+ II+ D+K N+LLD + +++DFG+ K N T GT Y+APE
Sbjct: 140 LHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTT--ATFCGTPDYIAPE 194
Query: 340 WYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY--AILTD 382
++ VD ++ GVLL E++ F+ E ++ AIL D
Sbjct: 195 ILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND 239
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 17/208 (8%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAV-KKLDR-VFQDGEKE-FKNEVVVIGQTHHKNLVRL 229
G GS+G K R S + V K+LD + EK+ +EV ++ + H N+VR
Sbjct: 15 GTGSYGRCQK----IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRY 70
Query: 230 LGFCDEGQNRLL--VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+ N L V E+ G LAS + K L ++ L ++C +
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 288 ------IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
++H D+KP N+ LD N ++ DFGLA++ LN + GT Y++PE
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDTSFAKTFVGTPYYMSPEQM 188
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRKSF 369
+ + K D++S G LL E+ + F
Sbjct: 189 NRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 98/203 (48%), Gaps = 18/203 (8%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G G FG V+K E T T A R +D E E KNE+ V+ Q H NL++L
Sbjct: 98 GGGRFGQVHK--CEETATGLKLAAKIIKTRGMKDKE-EVKNEISVMNQLDHANLIQLYDA 154
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAF--QIARGLLYLHEDCSSQI 288
+ + +LV E+++ G L + + S+NL I F QI G+ ++H+ I
Sbjct: 155 FESKNDIVLVMEYVDGGELFDRI---IDESYNLTELDTILFMKQICEGIRHMHQ---MYI 208
Query: 289 IHCDIKPQNILL--DDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTI 346
+H D+KP+NIL D +I DFGLA+ + + GT ++APE +
Sbjct: 209 LHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF---GTPEFLAPEVVNYDFV 265
Query: 347 TAKVDVYSFGVLLLEIISCRKSF 369
+ D++S GV+ ++S F
Sbjct: 266 SFPTDMWSVGVIAYMLLSGLSPF 288
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 168 FKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDR-VFQDGEKEFKNEVVVIGQTHHKNL 226
FK + G G+FG V+ + R+S +K +++ Q ++ + E+ V+ H N+
Sbjct: 26 FKRKLGSGAFGDVH---LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNI 82
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR----TNIAFQIARGLLYLHE 282
+++ ++ N +V E G L + L + Q+ L Y H
Sbjct: 83 IKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH- 141
Query: 283 DCSSQIIHCDIKPQNILLDD---HYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPE 339
S ++H D+KP+NIL D H +I DFGLA+L +S T GT Y+APE
Sbjct: 142 --SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF---KSDEHSTNAAGTALYMAPE 196
Query: 340 WYRKSTITAKVDVYSFGVLL 359
+++ +T K D++S GV++
Sbjct: 197 VFKRD-VTFKCDIWSAGVVM 215
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK-----EFKNEVVVIGQTHHK 224
EE G G F IV K + T A +KK R + E + EV ++ + H
Sbjct: 11 EELGSGQFAIVRKCRQKGTGKEYAAKFIKK--RRLSSSRRGVSREEIEREVNILREIRHP 68
Query: 225 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDC 284
N++ L + + +L+ E ++ G L FL + + T QI G+ YLH
Sbjct: 69 NIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH--- 125
Query: 285 SSQIIHCDIKPQNILLDDHY--NARIS--DFGLA-KLLTLNQSKTIKTAIRGTKGYVAPE 339
S +I H D+KP+NI+L D N RI DFG+A K+ N+ K I GT +VAPE
Sbjct: 126 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNI----FGTPEFVAPE 181
Query: 340 WYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE 376
+ + D++S GV+ ++S F E +E
Sbjct: 182 IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE 218
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 98/197 (49%), Gaps = 11/197 (5%)
Query: 173 GRGSFGIVYKGV-IETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 230
G G+FG VYKG+ I VA+K+L + KE +E V+ + ++ RLL
Sbjct: 21 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 80
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
G C +L+ + + G L ++ N+ + L N QIA G+ YL + +
Sbjct: 81 GICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAEGMNYLED---RR 134
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
++H D+ +N+L+ + +I+DFGLAKLL + + + ++A E T
Sbjct: 135 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 194
Query: 348 AKVDVYSFGVLLLEIIS 364
+ DV+S+GV + E+++
Sbjct: 195 HQSDVWSYGVTVWELMT 211
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 17/208 (8%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAV-KKLDR-VFQDGEKE-FKNEVVVIGQTHHKNLVRL 229
G GS+G K R S + V K+LD + EK+ +EV ++ + H N+VR
Sbjct: 15 GTGSYGRCQK----IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRY 70
Query: 230 LGFCDEGQNRLL--VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+ N L V E+ G LAS + K L ++ L ++C +
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 288 ------IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
++H D+KP N+ LD N ++ DFGLA++ LN + GT Y++PE
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDEDFAKEFVGTPYYMSPEQM 188
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRKSF 369
+ + K D++S G LL E+ + F
Sbjct: 189 NRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 42 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 98
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 99 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 153
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 154 --SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT-----------GYVATRWYR 200
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 201 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 234
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 105/224 (46%), Gaps = 14/224 (6%)
Query: 153 LRCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLD-RVFQDG--EK 209
+ F + +E+ D EE G G F IV K ++T A +KK R + G +
Sbjct: 2 METFKQQKVEDFYD-IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCRE 60
Query: 210 EFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI 269
E + EV ++ Q H N++ L + + +L+ E ++ G L FL S T+
Sbjct: 61 EIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF 120
Query: 270 AFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHY----NARISDFGLAKLLTLNQSKTI 325
QI G+ YLH + +I H D+KP+NI+L D + ++ DFGLA +
Sbjct: 121 IKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEF 175
Query: 326 KTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSF 369
K I GT +VAPE + + D++S GV+ ++S F
Sbjct: 176 KN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 36 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 93 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 147
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 148 --SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT-----------GYVATRWYR 194
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 105/224 (46%), Gaps = 14/224 (6%)
Query: 153 LRCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLD-RVFQDG--EK 209
+ F + +E+ D EE G G F IV K ++T A +KK R + G +
Sbjct: 2 MEPFKQQKVEDFYD-IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSRE 60
Query: 210 EFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI 269
E + EV ++ Q H N++ L + + +L+ E ++ G L FL S T+
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF 120
Query: 270 AFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHY----NARISDFGLAKLLTLNQSKTI 325
QI G+ YLH + +I H D+KP+NI+L D + ++ DFGLA +
Sbjct: 121 IKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEF 175
Query: 326 KTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSF 369
K I GT +VAPE + + D++S GV+ ++S F
Sbjct: 176 KN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKL-DRVFQDG--EKEFKNEVVVIGQTHHKNL 226
EE G G F +V K ++T A +KK + + G ++ + EV ++ + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSS 286
+ L + + +L+ E + G L FL + T QI G+ YLH S
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 287 QIIHCDIKPQNILLDDHY----NARISDFGLAKLLTL-NQSKTIKTAIRGTKGYVAPEWY 341
QI H D+KP+NI+L D +I DFGLA + N+ K I GT +VAPE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IFGTPEFVAPEIV 189
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRKSF 369
+ + D++S GV+ ++S F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKL-DRVFQDG--EKEFKNEVVVIGQTHHKNL 226
EE G G F +V K ++T A +KK + + G ++ + EV ++ + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSS 286
+ L + + +L+ E + G L FL + T QI G+ YLH S
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 287 QIIHCDIKPQNILLDDHY----NARISDFGLAKLLTL-NQSKTIKTAIRGTKGYVAPEWY 341
QI H D+KP+NI+L D +I DFGLA + N+ K I GT +VAPE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IFGTPEFVAPEIV 189
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRKSF 369
+ + D++S GV+ ++S F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKL-DRVFQDG--EKEFKNEVVVIGQTHHKNL 226
EE G G F +V K ++T A +KK + + G ++ + EV ++ + H N+
Sbjct: 17 EELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSS 286
+ L + + +L+ E + G L FL + T QI G+ YLH S
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 287 QIIHCDIKPQNILLDDHY----NARISDFGLAKLLTL-NQSKTIKTAIRGTKGYVAPEWY 341
QI H D+KP+NI+L D +I DFGLA + N+ K I GT +VAPE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IFGTPEFVAPEIV 189
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRKSF 369
+ + D++S GV+ ++S F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 36 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 93 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 147
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 148 --SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT-----------GYVATRWYR 194
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 12/213 (5%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 226
+ EE G G+FG+V++ T R + A K + + ++ + E+ + H L
Sbjct: 54 DIHEELGTGAFGVVHR---VTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCS 285
V L ++ +++YEF++ G L + + K S + Q+ +GL ++HE+
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN-- 168
Query: 286 SQIIHCDIKPQNILLDDHYNARIS--DFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRK 343
+H D+KP+NI+ + + DFGL L QS + T GT + APE
Sbjct: 169 -NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEG 224
Query: 344 STITAKVDVYSFGVLLLEIISCRKSFDIEMGEE 376
+ D++S GVL ++S F E +E
Sbjct: 225 KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE 257
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKL-DRVFQDG--EKEFKNEVVVIGQTHHKNL 226
EE G G F +V K ++T A +KK + + G ++ + EV ++ + H N+
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSS 286
+ L + + +L+ E + G L FL + T QI G+ YLH S
Sbjct: 76 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 132
Query: 287 QIIHCDIKPQNILLDDHY----NARISDFGLAKLLTL-NQSKTIKTAIRGTKGYVAPEWY 341
QI H D+KP+NI+L D +I DFGLA + N+ K I GT +VAPE
Sbjct: 133 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IFGTPEFVAPEIV 188
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRKSF 369
+ + D++S GV+ ++S F
Sbjct: 189 NYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKL-DRVFQDG--EKEFKNEVVVIGQTHHKNL 226
EE G G F +V K ++T A +KK + + G ++ + EV ++ + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSS 286
+ L + + +L+ E + G L FL + T QI G+ YLH S
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 287 QIIHCDIKPQNILLDDHY----NARISDFGLAKLLTL-NQSKTIKTAIRGTKGYVAPEWY 341
QI H D+KP+NI+L D +I DFGLA + N+ K I GT +VAPE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IFGTPEFVAPEIV 189
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRKSF 369
+ + D++S GV+ ++S F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 98/207 (47%), Gaps = 13/207 (6%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLD-RVFQDG--EKEFKNEVVVIGQTHHKNL 226
EE G G F IV K ++T A +KK R + G +E + EV ++ Q H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSS 286
+ L + + +L+ E ++ G L FL S T+ QI G+ YLH +
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH---TK 134
Query: 287 QIIHCDIKPQNILLDDHY----NARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
+I H D+KP+NI+L D + ++ DFGLA + K I GT +VAPE
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKN-IFGTPEFVAPEIVN 191
Query: 343 KSTITAKVDVYSFGVLLLEIISCRKSF 369
+ + D++S GV+ ++S F
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKL-DRVFQDG--EKEFKNEVVVIGQTHHKNL 226
EE G G F +V K ++T A +KK + + G ++ + EV ++ + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSS 286
+ L + + +L+ E + G L FL + T QI G+ YLH S
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 287 QIIHCDIKPQNILLDDHY----NARISDFGLAKLLTL-NQSKTIKTAIRGTKGYVAPEWY 341
QI H D+KP+NI+L D +I DFGLA + N+ K I GT +VAPE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IFGTPEFVAPEIV 189
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRKSF 369
+ + D++S GV+ ++S F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKL-DRVFQDG--EKEFKNEVVVIGQTHHKNL 226
EE G G F +V K ++T A +KK + + G ++ + EV ++ + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSS 286
+ L + + +L+ E + G L FL + T QI G+ YLH S
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 287 QIIHCDIKPQNILLDDHY----NARISDFGLAKLLTL-NQSKTIKTAIRGTKGYVAPEWY 341
QI H D+KP+NI+L D +I DFGLA + N+ K I GT +VAPE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IFGTPEFVAPEIV 189
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRKSF 369
+ + D++S GV+ ++S F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKL-DRVFQDG--EKEFKNEVVVIGQTHHKNL 226
EE G G F +V K ++T A +KK + + G ++ + EV ++ + H N+
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSS 286
+ L + + +L+ E + G L FL + T QI G+ YLH S
Sbjct: 76 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 132
Query: 287 QIIHCDIKPQNILLDDHY----NARISDFGLAKLLTL-NQSKTIKTAIRGTKGYVAPEWY 341
QI H D+KP+NI+L D +I DFGLA + N+ K I GT +VAPE
Sbjct: 133 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IFGTPEFVAPEIV 188
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRKSF 369
+ + D++S GV+ ++S F
Sbjct: 189 NYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 37 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 94 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 148
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 149 --SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMT-----------GYVATRWYR 195
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 31 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ S L + + +QI RGL Y+H
Sbjct: 88 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGL + + GYVA WYR
Sbjct: 143 --SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMT-----------GYVATRWYR 189
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 98/207 (47%), Gaps = 13/207 (6%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLD-RVFQDG--EKEFKNEVVVIGQTHHKNL 226
EE G G F IV K ++T A +KK R + G +E + EV ++ Q H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSS 286
+ L + + +L+ E ++ G L FL S T+ QI G+ YLH +
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH---TK 134
Query: 287 QIIHCDIKPQNILLDDHY----NARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
+I H D+KP+NI+L D + ++ DFGLA + K I GT +VAPE
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKN-IFGTPEFVAPEIVN 191
Query: 343 KSTITAKVDVYSFGVLLLEIISCRKSF 369
+ + D++S GV+ ++S F
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 33 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 90 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 144
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 145 --SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMT-----------GYVATRWYR 191
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 192 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 129/279 (46%), Gaps = 16/279 (5%)
Query: 173 GRGSFGIVYKGVIETTRTST-TAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKNLVRLL 230
G G FG V + T T VAVK L + +K E+ ++ +H+++++
Sbjct: 23 GEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYK 82
Query: 231 GFC-DEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIARGLLYLHEDCSS 286
G C D+G+ L LV E++ G+L +L + S L + F QI G+ YLH S
Sbjct: 83 GCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLH---SQ 136
Query: 287 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTL-NQSKTIKTAIRGTKGYVAPEWYRKST 345
IH ++ +N+LLD+ +I DFGLAK + ++ ++ + APE ++
Sbjct: 137 HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYK 196
Query: 346 ITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAM 404
DV+SFGV L E+++ C S ++ L A +L +L+E
Sbjct: 197 FYYASDVWSFGVTLYELLTHCDSSQSPPT--KFLELIGIAQGQMTVLRLTELLERGERLP 254
Query: 405 NDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVE 443
KC ++ + C + + S RPT + +L+ V E
Sbjct: 255 RPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHE 293
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 31 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 88 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----------GYVATRWYR 189
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 98/207 (47%), Gaps = 13/207 (6%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLD-RVFQDG--EKEFKNEVVVIGQTHHKNL 226
EE G G F IV K ++T A +KK R + G +E + EV ++ Q H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSS 286
+ L + + +L+ E ++ G L FL S T+ QI G+ YLH +
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH---TK 134
Query: 287 QIIHCDIKPQNILLDDHY----NARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
+I H D+KP+NI+L D + ++ DFGLA + K I GT +VAPE
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKN-IFGTPEFVAPEIVN 191
Query: 343 KSTITAKVDVYSFGVLLLEIISCRKSF 369
+ + D++S GV+ ++S F
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKL-DRVFQDG--EKEFKNEVVVIGQTHHKNL 226
EE G G F +V K ++T A +KK + + G ++ + EV ++ + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSS 286
+ L + + +L+ E + G L FL + T QI G+ YLH S
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 287 QIIHCDIKPQNILLDDHY----NARISDFGLAKLLTL-NQSKTIKTAIRGTKGYVAPEWY 341
QI H D+KP+NI+L D +I DFGLA + N+ K I GT +VAPE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IFGTPEFVAPEIV 189
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRKSF 369
+ + D++S GV+ ++S F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKL-DRVFQDG--EKEFKNEVVVIGQTHHKNL 226
EE G G F +V K ++T A +KK + + G ++ + EV ++ + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSS 286
+ L + + +L+ E + G L FL + T QI G+ YLH S
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 287 QIIHCDIKPQNILLDDHY----NARISDFGLAKLLTL-NQSKTIKTAIRGTKGYVAPEWY 341
QI H D+KP+NI+L D +I DFGLA + N+ K I GT +VAPE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IFGTPEFVAPEIV 189
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRKSF 369
+ + D++S GV+ ++S F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKL-DRVFQDG--EKEFKNEVVVIGQTHHKNL 226
EE G G F +V K ++T A +KK + + G ++ + EV ++ + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSS 286
+ L + + +L+ E + G L FL + T QI G+ YLH S
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 287 QIIHCDIKPQNILLDDHY----NARISDFGLAKLLTL-NQSKTIKTAIRGTKGYVAPEWY 341
QI H D+KP+NI+L D +I DFGLA + N+ K I GT +VAPE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IFGTPEFVAPEIV 189
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRKSF 369
+ + D++S GV+ ++S F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 98/207 (47%), Gaps = 13/207 (6%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLD-RVFQDG--EKEFKNEVVVIGQTHHKNL 226
EE G G F IV K ++T A +KK R + G +E + EV ++ Q H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSS 286
+ L + + +L+ E ++ G L FL S T+ QI G+ YLH +
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH---TK 134
Query: 287 QIIHCDIKPQNILLDDHY----NARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
+I H D+KP+NI+L D + ++ DFGLA + K I GT +VAPE
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKN-IFGTPEFVAPEIVN 191
Query: 343 KSTITAKVDVYSFGVLLLEIISCRKSF 369
+ + D++S GV+ ++S F
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 97/205 (47%), Gaps = 15/205 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKN---EVVVIGQTHHKNLVRL 229
G+GSFG K I + A+K +++ E +N E+ ++ H LV L
Sbjct: 24 GKGSFG---KVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNL 80
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ ++ +V + L G L L N+ ++ L YL + +II
Sbjct: 81 WYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQ---NQRII 137
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY---RKSTI 346
H D+KP NILLD+H + I+DF +A +L +T T + GTK Y+APE + + +
Sbjct: 138 HRDMKPDNILLDEHGHVHITDFNIAAMLP---RETQITTMAGTKPYMAPEMFSSRKGAGY 194
Query: 347 TAKVDVYSFGVLLLEIISCRKSFDI 371
+ VD +S GV E++ R+ + I
Sbjct: 195 SFAVDWWSLGVTAYELLRGRRPYHI 219
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 116/275 (42%), Gaps = 37/275 (13%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 226
+++ G G FG V+ T T VAVK + E F E V+ H L
Sbjct: 185 KLEKKLGAGQFGEVWMA----TYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKL 239
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIARGLLYLHEDC 284
V+L + + ++ EF+ G+L FL + L I F QIA G+ ++ +
Sbjct: 240 VKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ-- 296
Query: 285 SSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKS 344
IH D++ NIL+ +I+DFGLA++ K I+ T APE
Sbjct: 297 -RNYIHRDLRAANILVSASLVCKIADFGLARV-------GAKFPIKWT----APEAINFG 344
Query: 345 TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAM 404
+ T K DV+SFG+LL+EI++ + + N ++ +E
Sbjct: 345 SFTIKSDVWSFGILLMEIVTYGRI---------------PYPGMSNPEVIRALERGYRMP 389
Query: 405 NDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
C E+L + + C + P RPT + +L+
Sbjct: 390 RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 424
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 26/213 (12%)
Query: 171 EAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK----NEVVVIGQTH---H 223
E G G++G VYK S VA+K + RV +GE+ EV ++ + H
Sbjct: 11 EIGVGAYGTVYKA---RDPHSGHFVALKSV-RV-PNGEEGLPISTVREVALLRRLEAFEH 65
Query: 224 KNLVRLLGFC-----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARG 276
N+VRL+ C D LV+E ++ L ++L P T ++ Q RG
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 277 LLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYV 336
L +LH +C I+H D+KP+NIL+ +++DFGLA++ + + + T Y
Sbjct: 125 LDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA---LAPVVVTLWYR 178
Query: 337 APEWYRKSTITAKVDVYSFGVLLLEIISCRKSF 369
APE +ST VD++S G + E+ + F
Sbjct: 179 APEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 211
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKL-DRVFQDG--EKEFKNEVVVIGQTHHKNL 226
EE G G F +V K ++T A +KK + + G ++ + EV ++ + H N+
Sbjct: 17 EELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSS 286
+ L + + +L+ E + G L FL + T QI G+ YLH S
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 287 QIIHCDIKPQNILLDDHY----NARISDFGLAKLLTL-NQSKTIKTAIRGTKGYVAPEWY 341
QI H D+KP+NI+L D +I DFGLA + N+ K I GT +VAPE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IFGTPEFVAPEIV 189
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRKSF 369
+ + D++S GV+ ++S F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 31 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 88 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----------GYVATRWYR 189
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 31 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 88 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----------GYVATRWYR 189
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 99/195 (50%), Gaps = 11/195 (5%)
Query: 175 GSFGIVYKGV-IETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+FG VYKG+ I VA+K+L + KE +E V+ + ++ RLLG
Sbjct: 33 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 92
Query: 233 CDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
C +L++ + + G L ++ N+ + L N QIA+G+ YL + +++
Sbjct: 93 CLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---RRLV 146
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H D+ +N+L+ + +I+DFGLAKLL + + + ++A E T +
Sbjct: 147 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 206
Query: 350 VDVYSFGVLLLEIIS 364
DV+S+GV + E+++
Sbjct: 207 SDVWSYGVTVWELMT 221
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 33 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 90 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 144
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 145 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----------GYVATRWYR 191
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 192 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 105/230 (45%), Gaps = 40/230 (17%)
Query: 159 KALEEATDNFKEEA--GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNE 214
K + E + ++ A G G++G V T+T VAVKKL R FQ K E
Sbjct: 25 KTIWEVPERYQNLAPVGSGAYGSVCAAF--DTKTGHR-VAVKKLSRPFQSIIHAKRTYRE 81
Query: 215 VVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN-- 268
+ ++ H+N++ LL ++ E N+ L + L G N+ L +
Sbjct: 82 LRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 137
Query: 269 --IAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIK 326
+ +QI RGL Y+H S+ IIH D+KP N+ +++ +I DFGLA+ +
Sbjct: 138 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT---- 190
Query: 327 TAIRGTKGYVAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
GYVA WYR I VD++S G ++ E+++ R F
Sbjct: 191 -------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 233
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 11/200 (5%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+GSFG V K T+ + K +D + EV ++ + H N+++L
Sbjct: 31 GKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR-EVELLKKLDHPNIMKLFEI 89
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCD 292
++ + +V E G L + + S + I Q+ G+ Y+H+ I+H D
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK---HNIVHRD 146
Query: 293 IKPQNILLDDHY---NARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+KP+NILL+ + +I DFGL+ Q+ +K I GT Y+APE R T K
Sbjct: 147 LKPENILLESKEKDCDIKIIDFGLST--CFQQNTKMKDRI-GTAYYIAPEVLR-GTYDEK 202
Query: 350 VDVYSFGVLLLEIISCRKSF 369
DV+S GV+L ++S F
Sbjct: 203 CDVWSAGVILYILLSGTPPF 222
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 31 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 88 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----------GYVATRWYR 189
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 106/212 (50%), Gaps = 33/212 (15%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQ-THHKNLVR 228
E G G++G VYKG T +A K+ V D E+E K E+ ++ + +HH+N+
Sbjct: 30 ELVGNGTYGQVYKG----RHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 85
Query: 229 LLG-FCDEGQNRL-----LVYEFLNNGTLASFLF---GN-LKPSWNLRTNIAF---QIAR 275
G F + + LV EF G++ + GN LK W IA+ +I R
Sbjct: 86 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEW-----IAYICREILR 140
Query: 276 GLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGY 335
GL +LH+ ++IH DIK QN+LL ++ ++ DFG++ L+++ + GT +
Sbjct: 141 GLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSA--QLDRTVGRRNTFIGTPYW 195
Query: 336 VAPEWYR-----KSTITAKVDVYSFGVLLLEI 362
+APE +T K D++S G+ +E+
Sbjct: 196 MAPEVIACDENPDATYDFKSDLWSLGITAIEM 227
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 31 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 88 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----------GYVATRWYR 189
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 190 APEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 42 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 98
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 99 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 153
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 154 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----------GYVATRWYR 200
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 201 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 234
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 43 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 99
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 100 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 154
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 155 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----------GYVATRWYR 201
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 202 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 43 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 99
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 100 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 154
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 155 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----------GYVATRWYR 201
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 202 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 31 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 88 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----------GYVATRWYR 189
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 110/245 (44%), Gaps = 42/245 (17%)
Query: 166 DNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKE-FKNE--VVVIGQ 220
DN K E GRG +G VYKG ++ VAVK VF ++ F NE + +
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSLDER-----PVAVK----VFSFANRQNFINEKNIYRVPL 63
Query: 221 THHKNLVRLLG-----FCDEGQNRLLVYEFLNNGTLASFLFGNLKPS-WNLRTNIAFQIA 274
H N+ R + D LLV E+ NG+L +L +L S W +A +
Sbjct: 64 MEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL--SLHTSDWVSSCRLAHSVT 121
Query: 275 RGLLYLHEDC------SSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQ----SKT 324
RGL YLH + I H D+ +N+L+ + ISDFGL+ LT N+ +
Sbjct: 122 RGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEE 181
Query: 325 IKTAIR--GTKGYVAPEWYRKS-------TITAKVDVYSFGVLLLEI-ISCRKSFDIEMG 374
AI GT Y+APE + + +VD+Y+ G++ EI + C F E
Sbjct: 182 DNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV 241
Query: 375 EEYAI 379
EY +
Sbjct: 242 PEYQM 246
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 54 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 110
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 111 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 165
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 166 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----------GYVATRWYR 212
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 213 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 246
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 38 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 95 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 149
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 150 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----------GYVATRWYR 196
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 33 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 90 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 144
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 145 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----------GYVATRWYR 191
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 192 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 37 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 94 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 148
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 149 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----------GYVATRWYR 195
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 120/267 (44%), Gaps = 26/267 (9%)
Query: 173 GRGSFGIVYKGV-IETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 230
G G+FG VYKG+ I VA+K+L + KE +E V+ + ++ RLL
Sbjct: 26 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 85
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
G C +L++ + + G L ++ N+ + L N QIA+G+ YL + +
Sbjct: 86 GICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---RR 139
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
++H D+ +N+L+ + +I+DFG AKLL + + + ++A E T
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 199
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
+ DV+S+GV + E+++ G + +D ++ ++E
Sbjct: 200 HQSDVWSYGVTVWELMT--------FGSK-------PYDGIPASEISSILEKGERLPQPP 244
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKV 434
C + M+ + C D RP R++
Sbjct: 245 ICTIDVYMIMVKCWMIDADSRPKFREL 271
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 36 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 93 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 147
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 148 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----------GYVATRWYR 194
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 31 GSGAYGSVCAAF--DTKTGHR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 88 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----------GYVATRWYR 189
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 31 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 88 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----------GYVATRWYR 189
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 30 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 86
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 87 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 141
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 142 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----------GYVATRWYR 188
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 189 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 222
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 50 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 106
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 107 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 161
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 162 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----------GYVATRWYR 208
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 209 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 242
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 51 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 108 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 162
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 163 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----------GYVATRWYR 209
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 210 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 31 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 88 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----------GYVATRWYR 189
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 11/200 (5%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+GSFG V K T+ + K +D + EV ++ + H N+++L
Sbjct: 31 GKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR-EVELLKKLDHPNIMKLFEI 89
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCD 292
++ + +V E G L + + S + I Q+ G+ Y+H+ I+H D
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK---HNIVHRD 146
Query: 293 IKPQNILLDDHY---NARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+KP+NILL+ + +I DFGL+ Q+ +K I GT Y+APE R T K
Sbjct: 147 LKPENILLESKEKDCDIKIIDFGLST--CFQQNTKMKDRI-GTAYYIAPEVLR-GTYDEK 202
Query: 350 VDVYSFGVLLLEIISCRKSF 369
DV+S GV+L ++S F
Sbjct: 203 CDVWSAGVILYILLSGTPPF 222
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 11/200 (5%)
Query: 165 TDNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH 222
TD+++ EE G+G+F +V + ++ T T A + ++ ++ + E +
Sbjct: 30 TDDYQLFEELGKGAFSVVRR-CVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLK 88
Query: 223 HKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHE 282
H N+VRL E LV++ + G L + S ++ QI + ++H+
Sbjct: 89 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQ 148
Query: 283 DCSSQIIHCDIKPQNILLDDH---YNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPE 339
I+H D+KP+N+LL +++DFGLA + Q A GT GY++PE
Sbjct: 149 ---HDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFA--GTPGYLSPE 203
Query: 340 WYRKSTITAKVDVYSFGVLL 359
RK VD+++ GV+L
Sbjct: 204 VLRKDPYGKPVDIWACGVIL 223
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 110/242 (45%), Gaps = 26/242 (10%)
Query: 169 KEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVR 228
+ E GRG+ IVY+ + + A+K L + +K + E+ V+ + H N+++
Sbjct: 58 ESELGRGATSIVYRC---KQKGTQKPYALKVLKKTVD--KKIVRTEIGVLLRLSHPNIIK 112
Query: 229 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQI 288
L + LV E + G L + S + QI + YLHE+ I
Sbjct: 113 LKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHEN---GI 169
Query: 289 IHCDIKPQNILLD---DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKST 345
+H D+KP+N+L +I+DFGL+K++ + + + + GT GY APE R
Sbjct: 170 VHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKTVCGTPGYCAPEILRGCA 226
Query: 346 ITAKVDVYSFGVLLLEIISCRKSFDIEMGE----------EYAILTDWAFDCYRNGKLDD 395
+VD++S G++ ++ + F E G+ EY ++ W + N K D
Sbjct: 227 YGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAK--D 284
Query: 396 LV 397
LV
Sbjct: 285 LV 286
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 11/200 (5%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+GSFG V K T+ + K +D + EV ++ + H N+++L
Sbjct: 31 GKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR-EVELLKKLDHPNIMKLFEI 89
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCD 292
++ + +V E G L + + S + I Q+ G+ Y+H+ I+H D
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK---HNIVHRD 146
Query: 293 IKPQNILLDDHY---NARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+KP+NILL+ + +I DFGL+ Q+ +K I GT Y+APE R T K
Sbjct: 147 LKPENILLESKEKDCDIKIIDFGLST--CFQQNTKMKDRI-GTAYYIAPEVLR-GTYDEK 202
Query: 350 VDVYSFGVLLLEIISCRKSF 369
DV+S GV+L ++S F
Sbjct: 203 CDVWSAGVILYILLSGTPPF 222
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 119/265 (44%), Gaps = 26/265 (9%)
Query: 175 GSFGIVYKGV-IETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+FG VYKG+ I VA+K+L + KE +E V+ + ++ RLLG
Sbjct: 26 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 85
Query: 233 CDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
C +L+ + + G L ++ N+ + L N QIA+G+ YL + +++
Sbjct: 86 CLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---RRLV 139
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H D+ +N+L+ + +I+DFGLAKLL + + + ++A E T +
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 199
Query: 350 VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKC 409
DV+S+GV + E+++ G + +D ++ ++E C
Sbjct: 200 SDVWSYGVTVWELMT--------FGSK-------PYDGIPASEISSILEKGERLPQPPIC 244
Query: 410 VEKLLMVSIWCIQEDPSLRPTMRKV 434
+ M+ + C D RP R++
Sbjct: 245 TIDVYMIMVKCWMIDADSRPKFREL 269
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 50 GSGAYGSVCAAF--DTKTGHR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 106
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 107 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 161
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 162 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----------GYVATRWYR 208
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 209 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 242
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 36 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 93 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 147
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 148 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----------GYVATRWYR 194
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKL-DRVFQDG--EKEFKNEVVVIGQTHHKNL 226
EE G G F +V K ++T A +KK + + G ++ + EV ++ + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSS 286
+ L + + +L+ E + G L FL + T QI G+ YLH S
Sbjct: 77 ITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 287 QIIHCDIKPQNILLDDHY----NARISDFGLAKLLTL-NQSKTIKTAIRGTKGYVAPEWY 341
QI H D+KP+NI+L D +I DFGLA + N+ K I GT +VAPE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IFGTPEFVAPEIV 189
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRKSF 369
+ + D++S GV+ ++S F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 51 GSGAYGSVCAAF--DTKTGHR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 108 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 162
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 163 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----------GYVATRWYR 209
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 210 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 28 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 84
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 85 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 139
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 140 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----------GYVATRWYR 186
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 187 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 220
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 99/197 (50%), Gaps = 11/197 (5%)
Query: 173 GRGSFGIVYKGV-IETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 230
G G+FG VYKG+ I VA+K+L + KE +E V+ + ++ RLL
Sbjct: 26 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 85
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
G C +L++ + + G L ++ N+ + L N QIA+G+ YL + +
Sbjct: 86 GICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---RR 139
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
++H D+ +N+L+ + +I+DFG AKLL + + + ++A E T
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 199
Query: 348 AKVDVYSFGVLLLEIIS 364
+ DV+S+GV + E+++
Sbjct: 200 HQSDVWSYGVTVWELMT 216
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 120/267 (44%), Gaps = 26/267 (9%)
Query: 173 GRGSFGIVYKGV-IETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 230
G G+FG VYKG+ I VA+K+L + KE +E V+ + ++ RLL
Sbjct: 28 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 87
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
G C +L++ + + G L ++ N+ + L N QIA+G+ YL + +
Sbjct: 88 GICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---RR 141
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
++H D+ +N+L+ + +I+DFG AKLL + + + ++A E T
Sbjct: 142 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 201
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
+ DV+S+GV + E+++ G + +D ++ ++E
Sbjct: 202 HQSDVWSYGVTVWELMT--------FGSK-------PYDGIPASEISSILEKGERLPQPP 246
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKV 434
C + M+ + C D RP R++
Sbjct: 247 ICTIDVYMIMVKCWMIDADSRPKFREL 273
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 54 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 110
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 111 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 165
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA + GYVA WYR
Sbjct: 166 --SADIIHRDLKPSNLAVNEDCELKILDFGLA-----------RHTDDEMXGYVATRWYR 212
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 213 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 246
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 33 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 90 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 144
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 145 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----------GYVATRWYR 191
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 192 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 28 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 84
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 85 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 139
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 140 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----------GYVATRWYR 186
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 187 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 220
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 26/213 (12%)
Query: 171 EAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK----NEVVVIGQTH---H 223
E G G++G VYK S VA+K + RV +GE+ EV ++ + H
Sbjct: 11 EIGVGAYGTVYKA---RDPHSGHFVALKSV-RV-PNGEEGLPISTVREVALLRRLEAFEH 65
Query: 224 KNLVRLLGFC-----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARG 276
N+VRL+ C D LV+E ++ L ++L P T ++ Q RG
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 277 LLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYV 336
L +LH +C I+H D+KP+NIL+ +++DFGLA++ + + + T Y
Sbjct: 125 LDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA---LDPVVVTLWYR 178
Query: 337 APEWYRKSTITAKVDVYSFGVLLLEIISCRKSF 369
APE +ST VD++S G + E+ + F
Sbjct: 179 APEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 211
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 31 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 88 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----------GYVATRWYR 189
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 29 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 85
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 86 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 140
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 141 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----------GYVATRWYR 187
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 188 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 221
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 27 GSGAYGSVCAAF--DTKTGHR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 84 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 138
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 139 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----------GYVATRWYR 185
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 186 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 27 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 84 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 138
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 139 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----------GYVATRWYR 185
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 186 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 119/267 (44%), Gaps = 26/267 (9%)
Query: 173 GRGSFGIVYKGV-IETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 230
G G+FG VYKG+ I VA+K+L + KE +E V+ + ++ RLL
Sbjct: 24 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 83
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
G C +L+ + + G L ++ N+ + L N QIA+G+ YL + +
Sbjct: 84 GICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---RR 137
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
++H D+ +N+L+ + +I+DFG AKLL + + + ++A E T
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 197
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
+ DV+S+GV + E+++ G + +D ++ ++E
Sbjct: 198 HQSDVWSYGVTVWELMT--------FGSK-------PYDGIPASEISSILEKGERLPQPP 242
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKV 434
C + M+ + C D RP R++
Sbjct: 243 ICTIDVYMIMVKCWMIDADSRPKFREL 269
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 37 GSGAYGSVCAAF--DTKTGHR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 94 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 148
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 149 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----------GYVATRWYR 195
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 90/210 (42%), Gaps = 30/210 (14%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V R VAVKKL R FQ + E+ ++ H+N++ LL
Sbjct: 37 GSGAYGSVCSAYDARLRQK---VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN----IAFQIARGLLYLHEDCSS 286
+ E TL N+ S L + +Q+ RGL Y+H S+
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIH---SA 150
Query: 287 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTI 346
IIH D+KP N+ +++ RI DFGLA + A GYVA WYR I
Sbjct: 151 GIIHRDLKPSNVAVNEDSELRILDFGLA-----------RQADEEMTGYVATRWYRAPEI 199
Query: 347 -------TAKVDVYSFGVLLLEIISCRKSF 369
VD++S G ++ E++ + F
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLQGKALF 229
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 119/265 (44%), Gaps = 26/265 (9%)
Query: 175 GSFGIVYKGV-IETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+FG VYKG+ I VA+K+L + KE +E V+ + ++ RLLG
Sbjct: 33 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 92
Query: 233 CDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
C +L+ + + G L ++ N+ + L N QIA+G+ YL + +++
Sbjct: 93 CLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---RRLV 146
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H D+ +N+L+ + +I+DFGLAKLL + + + ++A E T +
Sbjct: 147 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 206
Query: 350 VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKC 409
DV+S+GV + E+++ G + +D ++ ++E C
Sbjct: 207 SDVWSYGVTVWELMT--------FGSK-------PYDGIPASEISSILEKGERLPQPPIC 251
Query: 410 VEKLLMVSIWCIQEDPSLRPTMRKV 434
+ M+ + C D RP R++
Sbjct: 252 TIDVYMIMVKCWMIDADSRPKFREL 276
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 98/205 (47%), Gaps = 29/205 (14%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE---KEFKNEVVVIGQTHHKNL 226
E+ G G++G V+K R + VA+K++ R+ D E E+ ++ + HKN+
Sbjct: 8 EKIGEGTYGTVFKA---KNRETHEIVALKRV-RLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASF--LFGNLKPSWNLRTNIAFQIARGLLYLHEDC 284
VRL + LV+EF + F G+L P + + FQ+ +GL + H
Sbjct: 64 VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPE--IVKSFLFQLLKGLGFCH--- 118
Query: 285 SSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKS 344
S ++H D+KPQN+L++ + ++++FGLA+ + +R V WYR
Sbjct: 119 SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGI--------PVRCYSAEVVTLWYRPP 170
Query: 345 TI-------TAKVDVYSFGVLLLEI 362
+ + +D++S G + E+
Sbjct: 171 DVLFGAKLYSTSIDMWSAGCIFAEL 195
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 37 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 94 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 148
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 149 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----------GYVATRWYR 195
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 27 GSGAYGSVCAAF--DTKTGHR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 84 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIH- 138
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 139 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----------GYVATRWYR 185
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 186 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 129/279 (46%), Gaps = 16/279 (5%)
Query: 173 GRGSFGIVYKGVIETTRTST-TAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKNLVRLL 230
G G FG V + T T VAVK L + +K E+ ++ +H+++++
Sbjct: 23 GEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYK 82
Query: 231 GFC-DEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIARGLLYLHEDCSS 286
G C D+G+ L LV E++ G+L +L + S L + F QI G+ YLH +
Sbjct: 83 GCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLH---AQ 136
Query: 287 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTL-NQSKTIKTAIRGTKGYVAPEWYRKST 345
IH ++ +N+LLD+ +I DFGLAK + ++ ++ + APE ++
Sbjct: 137 HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYK 196
Query: 346 ITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAM 404
DV+SFGV L E+++ C S ++ L A +L +L+E
Sbjct: 197 FYYASDVWSFGVTLYELLTHCDSSQSPPT--KFLELIGIAQGQMTVLRLTELLERGERLP 254
Query: 405 NDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVE 443
KC ++ + C + + S RPT + +L+ V E
Sbjct: 255 RPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHE 293
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 17/196 (8%)
Query: 168 FKEEAGRGSFGIVYKGVIETTRTSTTAVAVK--KLDRVFQDGEKEFKNEVVVIGQTHHKN 225
F E G G+F V+ + R + A+K K F+D E NE+ V+ + H+N
Sbjct: 13 FMEVLGSGAFSEVF---LVKQRLTGKLFALKCIKKSPAFRDSSLE--NEIAVLKKIKHEN 67
Query: 226 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 285
+V L + + LV + ++ G L + + + + Q+ + YLHE+
Sbjct: 68 IVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENG- 126
Query: 286 SQIIHCDIKPQNILL---DDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
I+H D+KP+N+L +++ I+DFGL+K+ Q+ + TA GT GYVAPE
Sbjct: 127 --IVHRDLKPENLLYLTPEENSKIMITDFGLSKM---EQNGIMSTAC-GTPGYVAPEVLA 180
Query: 343 KSTITAKVDVYSFGVL 358
+ + VD +S GV+
Sbjct: 181 QKPYSKAVDCWSIGVI 196
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 98/197 (49%), Gaps = 11/197 (5%)
Query: 173 GRGSFGIVYKGV-IETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 230
G G+FG VYKG+ I VA+K+L + KE +E V+ + ++ RLL
Sbjct: 26 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 85
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
G C +L+ + + G L ++ N+ + L N QIA+G+ YL + +
Sbjct: 86 GICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---RR 139
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
++H D+ +N+L+ + +I+DFG AKLL + + + ++A E T
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 199
Query: 348 AKVDVYSFGVLLLEIIS 364
+ DV+S+GV + E+++
Sbjct: 200 HQSDVWSYGVTVWELMT 216
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 102/213 (47%), Gaps = 26/213 (12%)
Query: 171 EAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK----NEVVVIGQTH---H 223
E G G++G VYK S VA+K + RV +GE+ EV ++ + H
Sbjct: 11 EIGVGAYGTVYKA---RDPHSGHFVALKSV-RV-PNGEEGLPISTVREVALLRRLEAFEH 65
Query: 224 KNLVRLLGFC-----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARG 276
N+VRL+ C D LV+E ++ L ++L P T ++ Q RG
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 277 LLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYV 336
L +LH +C I+H D+KP+NIL+ +++DFGLA++ + Q + T Y
Sbjct: 125 LDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSY-QMALFPVVV--TLWYR 178
Query: 337 APEWYRKSTITAKVDVYSFGVLLLEIISCRKSF 369
APE +ST VD++S G + E+ + F
Sbjct: 179 APEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 211
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 124/283 (43%), Gaps = 36/283 (12%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 229
E G+G FG VY G A+ + ++R +D K FK EV+ QT H+N+V
Sbjct: 39 ELIGKGRFGQVYHGRWH----GEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLF 94
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLF-GNLKPSWNLRTNIAFQIARGLLYLHEDCSSQI 288
+G C + ++ TL S + + N IA +I +G+ YLH + I
Sbjct: 95 MGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGI 151
Query: 289 IHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGY---VAPEWYR--- 342
+H D+K +N+ D+ I+DFGL + + Q+ + +R G+ +APE R
Sbjct: 152 LHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLS 210
Query: 343 ------KSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDL 396
K + DV++ G + E+ + F + E AI+ W L +
Sbjct: 211 PDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE--AII--WQMGTGMKPNLSQI 266
Query: 397 VEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLE 439
G + ++DI ++ W +++ RPT K+ MLE
Sbjct: 267 GMG--KEISDI-------LLFCWAFEQEE--RPTFTKLMDMLE 298
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 117/267 (43%), Gaps = 26/267 (9%)
Query: 173 GRGSFGIVYKGV-IETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 230
G G+FG VYKG+ I VA+K+L + KE +E V+ + ++ RLL
Sbjct: 31 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 90
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
G C +L+ + + G L ++ N+ + L N QIA+G+ YL + +
Sbjct: 91 GICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---RR 144
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
++H D+ +N+L+ + +I+DFG AKLL + + + ++A E T
Sbjct: 145 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 204
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 407
+ DV+S+GV + E+++ +D ++ ++E
Sbjct: 205 HQSDVWSYGVTVWELMT---------------FGSKPYDGIPASEISSILEKGERLPQPP 249
Query: 408 KCVEKLLMVSIWCIQEDPSLRPTMRKV 434
C + M+ + C D RP R++
Sbjct: 250 ICTIDVYMIMVKCWMIDADSRPKFREL 276
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 103/214 (48%), Gaps = 18/214 (8%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDR--VFQDGEKE-FKNEVVVIGQTHHKNLVRL 229
G+GSFG V ++ + + AVK + + V Q +KE EV ++ Q H N+ +L
Sbjct: 35 GKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKL 91
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
F ++ LV E G L + + S I Q+ G+ Y H++ +I+
Sbjct: 92 YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKN---KIV 148
Query: 290 HCDIKPQNILLDDH---YNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTI 346
H D+KP+N+LL+ N RI DFGL+ SK K I GT Y+APE T
Sbjct: 149 HRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKXKDKI-GTAYYIAPEVLH-GTY 204
Query: 347 TAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 380
K DV+S GV+L ++S F+ EY IL
Sbjct: 205 DEKCDVWSTGVILYILLSGCPPFN--GANEYDIL 236
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 98/197 (49%), Gaps = 11/197 (5%)
Query: 173 GRGSFGIVYKGV-IETTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 230
G G+FG VYKG+ I VA+ +L + KE +E V+ + ++ RLL
Sbjct: 58 GSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLL 117
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
G C +L+ + + G L ++ N+ + L N QIA+G+ YL + +
Sbjct: 118 GICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---RR 171
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
++H D+ +N+L+ + +I+DFGLAKLL + + + ++A E T
Sbjct: 172 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 231
Query: 348 AKVDVYSFGVLLLEIIS 364
+ DV+S+GV + E+++
Sbjct: 232 HQSDVWSYGVTVWELMT 248
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 100/212 (47%), Gaps = 8/212 (3%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKN 225
NF G+GSFG V + T A+ + K D V QD + E E V+
Sbjct: 22 NFLMVLGKGSFGKVMLADRKGTE-ELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPP 80
Query: 226 LVRLLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDC 284
+ L C + +RL V E++N G L + K A +I+ GL +LH+
Sbjct: 81 FLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHK-- 138
Query: 285 SSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKS 344
II+ D+K N++LD + +I+DFG+ K ++ T + GT Y+APE
Sbjct: 139 -RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFC--GTPDYIAPEIIAYQ 195
Query: 345 TITAKVDVYSFGVLLLEIISCRKSFDIEMGEE 376
VD +++GVLL E+++ + FD E +E
Sbjct: 196 PYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE 227
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 31 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 88 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I D+GLA+ + GYVA WYR
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMT-----------GYVATRWYR 189
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 17/211 (8%)
Query: 165 TDNF--KEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH 222
TD + KE+ G GS+ + + + + T AVK +D+ +D +E + +++
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNME---FAVKIIDKSKRDPTEEIE---ILLRYGQ 74
Query: 223 HKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHE 282
H N++ L D+G+ +V E + G L + S + + F I + + YLH
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLH- 133
Query: 283 DCSSQIIHCDIKPQNILLDDHY----NARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAP 338
+ ++H D+KP NIL D + RI DFG AK L + T +VAP
Sbjct: 134 --AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY--TANFVAP 189
Query: 339 EWYRKSTITAKVDVYSFGVLLLEIISCRKSF 369
E + A D++S GVLL +++ F
Sbjct: 190 EVLERQGYDAACDIWSLGVLLYTMLTGYTPF 220
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL + FQ K E+ ++ H+N++ LL
Sbjct: 43 GSGAYGSVCAAF--DTKTGLR-VAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLL 99
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 100 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 154
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 155 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----------GYVATRWYR 201
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 202 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 95/214 (44%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V S +AVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 60 GSGAYGSVCSSY---DVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 116
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
+ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 117 DVFTPATS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 171
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + GYVA WYR
Sbjct: 172 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----------GYVATRWYR 218
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 219 APEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLF 252
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 31 GSGAYGSVCAAF--DTKTGHR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 88 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + G+VA WYR
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMA-----------GFVATRWYR 189
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 91/205 (44%), Gaps = 31/205 (15%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG--EKEFKNEVVVIGQTHHKNLVRLL 230
G GS+G+V+K R + VA+KK D +K E+ ++ Q H NLV LL
Sbjct: 12 GEGSYGVVFKC---RNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLL 68
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIH 290
+ LV+E+ ++ L +L +I +Q + + + H+ IH
Sbjct: 69 EVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHK---HNCIH 125
Query: 291 CDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGY----VAPEWYRKSTI 346
D+KP+NIL+ H ++ DFG A+LLT G Y VA WYR +
Sbjct: 126 RDVKPENILITKHSVIKLCDFGFARLLT------------GPSDYYDDEVATRWYRSPEL 173
Query: 347 T-------AKVDVYSFGVLLLEIIS 364
VDV++ G + E++S
Sbjct: 174 LVGDTQYGPPVDVWAIGCVFAELLS 198
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 11/207 (5%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G G++G V + T A+ + + V + EV V+ H N+++L F
Sbjct: 46 GSGAYGEVLLCRDKVTHVER-AIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF 104
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCD 292
++ +N LV E G L + +K + I Q+ G+ YLH+ I+H D
Sbjct: 105 FEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHK---HNIVHRD 161
Query: 293 IKPQNILLDDHYN---ARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+KP+N+LL+ +I DFGL+ + NQ K + GT Y+APE RK K
Sbjct: 162 LKPENLLLESKEKDALIKIVDFGLSAVFE-NQKKMKERL--GTAYYIAPEVLRKK-YDEK 217
Query: 350 VDVYSFGVLLLEIISCRKSFDIEMGEE 376
DV+S GV+L +++ F + +E
Sbjct: 218 CDVWSIGVILFILLAGYPPFGGQTDQE 244
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 31 GSGAYGSVCAAF--DTKTGHR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 88 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + G+VA WYR
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMA-----------GFVATRWYR 189
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 109/234 (46%), Gaps = 39/234 (16%)
Query: 160 ALEEATDNFKEEA--GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVV 217
+L A+D F+E A G+G+FG V K + A+KK+ R ++ +EV++
Sbjct: 1 SLRYASD-FEEIAVLGQGAFGQVVKA---RNALDSRYYAIKKI-RHTEEKLSTILSEVML 55
Query: 218 IGQTHHKNLVRLLGFCDEGQN-------------RLLVYEFLNNGTLASFLFG-NLKPSW 263
+ +H+ +VR E +N + E+ NGTL + NL
Sbjct: 56 LASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQR 115
Query: 264 NLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAK-------L 316
+ + QI L Y+H S IIH D+KP NI +D+ N +I DFGLAK +
Sbjct: 116 DEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDI 172
Query: 317 LTLN------QSKTIKTAIRGTKGYVAPEWYRKS-TITAKVDVYSFGVLLLEII 363
L L+ S + +AI GT YVA E + K+D+YS G++ E+I
Sbjct: 173 LKLDSQNLPGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 19/211 (9%)
Query: 171 EAGRGSFGIVYKGVIETTR--TSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH---HKN 225
E G G++G VYK + + +V V EV ++ + H N
Sbjct: 16 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPN 75
Query: 226 LVRLLGFC-----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARGLL 278
+VRL+ C D LV+E ++ L ++L P T ++ Q RGL
Sbjct: 76 VVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLD 134
Query: 279 YLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAP 338
+LH +C I+H D+KP+NIL+ +++DFGLA++ + + T + T Y AP
Sbjct: 135 FLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA---LTPVVVTLWYRAP 188
Query: 339 EWYRKSTITAKVDVYSFGVLLLEIISCRKSF 369
E +ST VD++S G + E+ + F
Sbjct: 189 EVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 219
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 170 EEAGRGSFGIVYKGVIETT--RTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 227
E G+G+F +V + + T + + V V K ++ K E + H ++V
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTL---------ASFLFGNLKPSWNLRTNIAFQIARGLL 278
LL +V+EF++ L A F++ S +R QI L
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR-----QILEALR 144
Query: 279 YLHEDCSSQIIHCDIKPQNILLDDHYNA---RISDFGLAKLLTLNQSKTIKTAIRGTKGY 335
Y H++ IIH D+KP+N+LL N+ ++ DFG+A + L +S + GT +
Sbjct: 145 YCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVA--IQLGESGLVAGGRVGTPHF 199
Query: 336 VAPEWYRKSTITAKVDVYSFGVLLLEIIS 364
+APE ++ VDV+ GV+L ++S
Sbjct: 200 MAPEVVKREPYGKPVDVWGCGVILFILLS 228
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 13/201 (6%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKL--DRVFQDG-EKEFKNEVVVIGQTHHKNLVRL 229
G+G FG VY + + S VA+K L ++ ++G E + + E+ + HH N++RL
Sbjct: 32 GKGKFGNVY---LAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRL 88
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ + + L+ E+ G L L + I ++A L+Y H ++I
Sbjct: 89 YNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCH---GKKVI 145
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DIKP+N+LL +I+DFG +++ + + GT Y+ PE K
Sbjct: 146 HRDIKPENLLLGLKGELKIADFG----WSVHAPSLRRKTMCGTLDYLPPEMIEGRMHNEK 201
Query: 350 VDVYSFGVLLLEIISCRKSFD 370
VD++ GVL E++ F+
Sbjct: 202 VDLWCIGVLCYELLVGNPPFE 222
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 100/204 (49%), Gaps = 13/204 (6%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRV---FQDGEKEFKNEVVVIGQTHHKNLVRL 229
G G+FG V G + T VAVK L+R D + K E+ + H ++++L
Sbjct: 20 GVGTFGKVKIGEHQLT---GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ +V E+++ G L ++ + + + QI + Y H ++
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR---HMVV 133
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITA- 348
H D+KP+N+LLD H NA+I+DFGL+ +++ + ++T+ G+ Y APE
Sbjct: 134 HRDLKPENVLLDAHMNAKIADFGLSNMMS--DGEFLRTSC-GSPNYAAPEVISGRLYAGP 190
Query: 349 KVDVYSFGVLLLEIISCRKSFDIE 372
+VD++S GV+L ++ FD E
Sbjct: 191 EVDIWSCGVILYALLCGTLPFDDE 214
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 27 GSGAYGSVCAAF--DTKTGHR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 84 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 138
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + G+VA WYR
Sbjct: 139 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMA-----------GFVATRWYR 185
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 186 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 34/226 (15%)
Query: 168 FKEEAGRGSFGIVYKGVIE--TTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHK 224
+ + G G+FG V++ T VAVK L + D + +F+ E ++ + +
Sbjct: 51 YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNP 110
Query: 225 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP-----------SWNLRTN----- 268
N+V+LLG C G+ L++E++ G L FL ++ P S R +
Sbjct: 111 NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFL-RSMSPHTVCSLSHSDLSTRARVSSPGPP 169
Query: 269 ---------IAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAK-LLT 318
IA Q+A G+ YL E + +H D+ +N L+ ++ +I+DFGL++ + +
Sbjct: 170 PLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYS 226
Query: 319 LNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIIS 364
+ K + ++ PE + T + DV+++GV+L EI S
Sbjct: 227 ADYYKADGNDAIPIR-WMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 94/201 (46%), Gaps = 13/201 (6%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKL--DRVFQDG-EKEFKNEVVVIGQTHHKNLVRL 229
G+G FG VY + + + +A+K L ++ ++G E + + E+ + H N++R+
Sbjct: 23 GKGKFGNVY---LAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 79
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ + + L+ EF G L L + + ++A L Y HE ++I
Sbjct: 80 YNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHE---RKVI 136
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DIKP+N+L+ +I+DFG +++ + + GT Y+ PE T K
Sbjct: 137 HRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEK 192
Query: 350 VDVYSFGVLLLEIISCRKSFD 370
VD++ GVL E + FD
Sbjct: 193 VDLWCAGVLCYEFLVGMPPFD 213
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 94/201 (46%), Gaps = 13/201 (6%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKL--DRVFQDG-EKEFKNEVVVIGQTHHKNLVRL 229
G+G FG VY + + + +A+K L ++ ++G E + + E+ + H N++R+
Sbjct: 24 GKGKFGNVY---LAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 80
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ + + L+ EF G L L + + ++A L Y HE ++I
Sbjct: 81 YNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHE---RKVI 137
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DIKP+N+L+ +I+DFG +++ + + GT Y+ PE T K
Sbjct: 138 HRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEK 193
Query: 350 VDVYSFGVLLLEIISCRKSFD 370
VD++ GVL E + FD
Sbjct: 194 VDLWCAGVLCYEFLVGMPPFD 214
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 35/212 (16%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG--EKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V + + S VA+KKL R FQ K E++++ H+N++ LL
Sbjct: 33 GSGAYGSVCSAI---DKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 89
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN------IAFQIARGLLYLHEDC 284
+ Y+F + F+ +L+ L+ + + +Q+ +GL Y+H
Sbjct: 90 DVFTPASSLRNFYDFY---LVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIH--- 143
Query: 285 SSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKS 344
S+ ++H D+KP N+ +++ +I DFGLA + A GYV WYR
Sbjct: 144 SAGVVHRDLKPGNLAVNEDCELKILDFGLA-----------RHADAEMTGYVVTRWYRAP 192
Query: 345 TI-------TAKVDVYSFGVLLLEIISCRKSF 369
+ VD++S G ++ E+++ + F
Sbjct: 193 EVILSWMHYNQTVDIWSVGCIMAEMLTGKTLF 224
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 100/202 (49%), Gaps = 26/202 (12%)
Query: 173 GRGSFGIV---YKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLV 227
G G+ GIV Y ++E VA+KKL R FQ+ K E+V++ +HKN++
Sbjct: 33 GSGAQGIVCAAYDAILERN------VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNII 86
Query: 228 RLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 281
LL +E Q+ +V E ++ L+ + ++ + + +Q+ G+ +LH
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVI--QMELDHERMSYLLYQMLVGIKHLH 143
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 197
Query: 342 RKSTITAKVDVYSFGVLLLEII 363
VD++S GV++ E+I
Sbjct: 198 LGMGYKENVDIWSVGVIMGEMI 219
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 94/201 (46%), Gaps = 13/201 (6%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKL--DRVFQDG-EKEFKNEVVVIGQTHHKNLVRL 229
G+G FG VY + + + +A+K L ++ ++G E + + E+ + H N++R+
Sbjct: 23 GKGKFGNVY---LAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 79
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ + + L+ EF G L L + + ++A L Y HE ++I
Sbjct: 80 YNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHE---RKVI 136
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
H DIKP+N+L+ +I+DFG +++ + + GT Y+ PE T K
Sbjct: 137 HRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEK 192
Query: 350 VDVYSFGVLLLEIISCRKSFD 370
VD++ GVL E + FD
Sbjct: 193 VDLWCAGVLCYEFLVGMPPFD 213
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 100/202 (49%), Gaps = 26/202 (12%)
Query: 173 GRGSFGIV---YKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLV 227
G G+ GIV Y ++E VA+KKL R FQ+ K E+V++ +HKN++
Sbjct: 33 GSGAQGIVVAAYDAILERN------VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNII 86
Query: 228 RLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 281
LL +E Q+ +V E ++ L+ + ++ + + +Q+ G+ +LH
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVI--QMELDHERMSYLLYQMLVGIKHLH 143
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 197
Query: 342 RKSTITAKVDVYSFGVLLLEII 363
VD++S GV++ E+I
Sbjct: 198 LGMGYKENVDIWSVGVIMGEMI 219
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 89/210 (42%), Gaps = 30/210 (14%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V R VAVKKL R FQ + E+ ++ H+N++ LL
Sbjct: 37 GSGAYGSVCSAYDARLRQK---VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN----IAFQIARGLLYLHEDCSS 286
+ E TL N+ L + +Q+ RGL Y+H S+
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH---SA 150
Query: 287 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTI 346
IIH D+KP N+ +++ RI DFGLA + A GYVA WYR I
Sbjct: 151 GIIHRDLKPSNVAVNEDSELRILDFGLA-----------RQADEEMTGYVATRWYRAPEI 199
Query: 347 -------TAKVDVYSFGVLLLEIISCRKSF 369
VD++S G ++ E++ + F
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLQGKALF 229
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 103/217 (47%), Gaps = 26/217 (11%)
Query: 168 FKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKNL 226
KE G G FG V + + + T VA+K+ + +E + E+ ++ + +H N+
Sbjct: 18 MKERLGTGGFGYVLRWIHQDT---GEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNV 74
Query: 227 VRLLGFCDEGQN------RLLVYEFLNNGTLASFL--FGN---LKPSWNLRTNIAFQIAR 275
V D Q LL E+ G L +L F N LK +RT ++ I+
Sbjct: 75 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG-PIRTLLS-DISS 132
Query: 276 GLLYLHEDCSSQIIHCDIKPQNILLD---DHYNARISDFGLAKLLTLNQSKTIKTAIRGT 332
L YLHE+ +IIH D+KP+NI+L +I D G AK L+Q + + T GT
Sbjct: 133 ALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGE-LCTEFVGT 186
Query: 333 KGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSF 369
Y+APE + T VD +SFG L E I+ + F
Sbjct: 187 LQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 89/210 (42%), Gaps = 30/210 (14%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V R VAVKKL R FQ + E+ ++ H+N++ LL
Sbjct: 29 GSGAYGSVCSAYDARLRQK---VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN----IAFQIARGLLYLHEDCSS 286
+ E TL N+ L + +Q+ RGL Y+H S+
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH---SA 142
Query: 287 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTI 346
IIH D+KP N+ +++ RI DFGLA + A GYVA WYR I
Sbjct: 143 GIIHRDLKPSNVAVNEDCELRILDFGLA-----------RQADEEMTGYVATRWYRAPEI 191
Query: 347 -------TAKVDVYSFGVLLLEIISCRKSF 369
VD++S G ++ E++ + F
Sbjct: 192 MLNWMHYNQTVDIWSVGCIMAELLQGKALF 221
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 103/217 (47%), Gaps = 26/217 (11%)
Query: 168 FKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKNL 226
KE G G FG V + + + T VA+K+ + +E + E+ ++ + +H N+
Sbjct: 19 MKERLGTGGFGYVLRWIHQDT---GEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNV 75
Query: 227 VRLLGFCDEGQN------RLLVYEFLNNGTLASFL--FGN---LKPSWNLRTNIAFQIAR 275
V D Q LL E+ G L +L F N LK +RT ++ I+
Sbjct: 76 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG-PIRTLLS-DISS 133
Query: 276 GLLYLHEDCSSQIIHCDIKPQNILLD---DHYNARISDFGLAKLLTLNQSKTIKTAIRGT 332
L YLHE+ +IIH D+KP+NI+L +I D G AK L+Q + + T GT
Sbjct: 134 ALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGE-LCTEFVGT 187
Query: 333 KGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSF 369
Y+APE + T VD +SFG L E I+ + F
Sbjct: 188 LQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEF-KNEVVVIGQTHHKNLVRLLG 231
GRGS+ V ++ T A+ V K + V D + ++ + E V Q + + L
Sbjct: 61 GRGSYAKVLLVRLKKT-DRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 119
Query: 232 FCDEGQNRLL-VYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHEDCSSQII 289
C + ++RL V E++N G L + K P + R A +I+ L YLHE II
Sbjct: 120 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNYLHE---RGII 175
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+K N+LLD + +++D+G+ K L T T GT Y+APE R
Sbjct: 176 YRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSTFC-GTPNYIAPEILRGEDYGFS 233
Query: 350 VDVYSFGVLLLEIISCRKSFDI 371
VD ++ GVL+ E+++ R FDI
Sbjct: 234 VDWWALGVLMFEMMAGRSPFDI 255
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 31 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 88 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I D GLA+ + GYVA WYR
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMT-----------GYVATRWYR 189
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 109/243 (44%), Gaps = 17/243 (6%)
Query: 144 PGDGTVETNLRCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDR- 202
PG G+++ + F + G GSF V V+ ++ A+K L++
Sbjct: 17 PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTV---VLARELATSREYAIKILEKR 73
Query: 203 --VFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV-YEFLNNGTLASFL--FG 257
+ ++ E V+ + H V+L FC + +L + NG L ++ G
Sbjct: 74 HIIKENKVPYVTRERDVMSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIG 132
Query: 258 NLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLL 317
+ + R A +I L YLH IIH D+KP+NILL++ + +I+DFG AK+L
Sbjct: 133 SFDETCT-RFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 187
Query: 318 TLNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY 377
+ + GT YV+PE + + D+++ G ++ ++++ F G EY
Sbjct: 188 SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEY 245
Query: 378 AIL 380
I
Sbjct: 246 LIF 248
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 26/208 (12%)
Query: 173 GRGSFGIV---YKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLV 227
G G+ GIV Y V++ VA+KKL R FQ+ K E+V++ +HKN++
Sbjct: 33 GSGAQGIVCAAYDAVLDRN------VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNII 86
Query: 228 RLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 281
LL +E Q+ LV E ++ L + L + + +Q+ G+ +LH
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQMEL--DHERMSYLLYQMLXGIKHLH 143
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 197
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRKSF 369
VD++S G ++ E++ + F
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHKILF 225
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 31 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 88 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I FGLA+ + GYVA WYR
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMT-----------GYVATRWYR 189
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 102/212 (48%), Gaps = 28/212 (13%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG--EKEFKNEVVVIGQTHHKNLV 227
+ G G++G V V RT VA+KKL R FQ K E+ ++ H+N++
Sbjct: 31 QPVGSGAYGAVCSAV--DGRTGAK-VAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVI 87
Query: 228 RLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 281
LL D+ + LV F+ GT L + K + + +Q+ +GL Y+H
Sbjct: 88 GLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIH 145
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPE-- 339
++ IIH D+KP N+ +++ +I DFGLA+ Q+ + T+ Y APE
Sbjct: 146 ---AAGIIHRDLKPGNLAVNEDCELKILDFGLAR-----QADSEMXGXVVTRWYRAPEVI 197
Query: 340 --WYRKSTITAKVDVYSFGVLLLEIISCRKSF 369
W R T VD++S G ++ E+I+ + F
Sbjct: 198 LNWMR---YTQTVDIWSVGCIMAEMITGKTLF 226
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 18/204 (8%)
Query: 173 GRGSFGIVYKGVIETTRTSTTA--VAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLV 227
G+G+F V + R T VAVK +D+ + +K F+ EV ++ +H N+V
Sbjct: 23 GKGNFAKV-----KLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIV 76
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+L + + LV E+ + G + +L + + QI + Y H+
Sbjct: 77 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF--- 133
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR-KSTI 346
I+H D+K +N+LLD N +I+DFG + T A G Y APE ++ K
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDAFCGAPPYAAPELFQGKKYD 190
Query: 347 TAKVDVYSFGVLLLEIISCRKSFD 370
+VDV+S GV+L ++S FD
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 9/200 (4%)
Query: 173 GRGSFGIVY--KGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL- 229
G+GSFG V+ K + + A+ V K + K E ++ + +H +V+L
Sbjct: 33 GQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLH 92
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
F EG+ L+ +FL G L + L K ++ F +A L L S II
Sbjct: 93 YAFQTEGK-LYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELALALDHLHSLGII 148
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+NILLD+ + +++DFGL+K ++ K + GT Y+APE + T
Sbjct: 149 YRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY--SFCGTVEYMAPEVVNRRGHTQS 206
Query: 350 VDVYSFGVLLLEIISCRKSF 369
D +SFGVL+ E+++ F
Sbjct: 207 ADWWSFGVLMFEMLTGTLPF 226
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 31 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 88 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I D GLA+ + GYVA WYR
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMT-----------GYVATRWYR 189
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 31 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 88 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA+ + G VA WYR
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----------GXVATRWYR 189
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 122/280 (43%), Gaps = 22/280 (7%)
Query: 144 PGDGTVETNLRCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDR- 202
PG G+++ + F + G GSF V V+ ++ A+K L++
Sbjct: 12 PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTV---VLARELATSREYAIKILEKR 68
Query: 203 --VFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGN 258
+ ++ E V+ + H V+L + + + NG L ++ G+
Sbjct: 69 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGS 128
Query: 259 LKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLT 318
+ R A +I L YLH IIH D+KP+NILL++ + +I+DFG AK+L+
Sbjct: 129 FDETCT-RFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 183
Query: 319 LNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYA 378
+ + GT YV+PE + + + D+++ G ++ ++++ F G EY
Sbjct: 184 PESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPF--RAGNEYL 241
Query: 379 ILT-----DWAFDCYRNGKLDDLVEG--DMEAMNDIKCVE 411
I ++ F K DLVE ++A + C E
Sbjct: 242 IFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEE 281
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 101/217 (46%), Gaps = 18/217 (8%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTT---AVAVKKLDRVFQDGEKEFKN-EVVVIGQTH 222
NF G+GSFG V+ + R T AV + K D V QD + E E V+
Sbjct: 23 NFLMVLGKGSFG----KVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG 78
Query: 223 HKNLVRLLGFCDEGQNRL-LVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLY 279
+ L C + +RL V E++N G L + G K + A +IA GL +
Sbjct: 79 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVF--YAAEIAIGLFF 136
Query: 280 LHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPE 339
L S II+ D+K N++LD + +I+DFG+ K + T GT Y+APE
Sbjct: 137 LQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTT--KXFCGTPDYIAPE 191
Query: 340 WYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE 376
VD ++FGVLL E+++ + F+ E +E
Sbjct: 192 IIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 228
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 31 GSGAYGSVCAAF--DTKTGHR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 88 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DF LA+ + GYVA WYR
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMT-----------GYVATRWYR 189
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 109/242 (45%), Gaps = 15/242 (6%)
Query: 144 PGDGTVETNLRCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDR- 202
PG G+++ + F + G GSF V V+ ++ A+K L++
Sbjct: 10 PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTV---VLARELATSREYAIKILEKR 66
Query: 203 -VFQDGEKEF-KNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGN 258
+ ++ + + E V+ + H V+L + + + NG L ++ G+
Sbjct: 67 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 126
Query: 259 LKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLT 318
+ R A +I L YLH IIH D+KP+NILL++ + +I+DFG AK+L+
Sbjct: 127 FDETCT-RFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 181
Query: 319 LNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYA 378
+ A GT YV+PE + + D+++ G ++ ++++ F G EY
Sbjct: 182 PESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYL 239
Query: 379 IL 380
I
Sbjct: 240 IF 241
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 18/204 (8%)
Query: 173 GRGSFGIVYKGVIETTRTSTTA--VAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLV 227
G+G+F V + R T VA+K +D+ + +K F+ EV ++ +H N+V
Sbjct: 24 GKGNFAKV-----KLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIV 77
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+L + + L+ E+ + G + +L + + + QI + Y H+ +
Sbjct: 78 KLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ---KR 134
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR-KSTI 346
I+H D+K +N+LLD N +I+DFG + T+ A G Y APE ++ K
Sbjct: 135 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK---LDAFCGAPPYAAPELFQGKKYD 191
Query: 347 TAKVDVYSFGVLLLEIISCRKSFD 370
+VDV+S GV+L ++S FD
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 96/214 (44%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 51 GSGAYGSVCAAF--DTKTGHR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 108 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 162
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I DFGLA + G VA WYR
Sbjct: 163 --SADIIHRDLKPSNLAVNEDCELKILDFGLA-----------RHTDDEMXGXVATRWYR 209
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 210 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 102/214 (47%), Gaps = 27/214 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRLLG 231
G GSFG+V++ + + VA+KK V QD K FKN E+ ++ H N+V L
Sbjct: 49 GNGSFGVVFQAKL----VESDEVAIKK---VLQD--KRFKNRELQIMRIVKHPNVVDLKA 99
Query: 232 FCDEGQNRL------LVYEFLNNGTL-ASFLFGNLKPSWN--LRTNIAFQIARGLLYLHE 282
F ++ LV E++ AS + LK + L +Q+ R L Y+H
Sbjct: 100 FFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH- 158
Query: 283 DCSSQIIHCDIKPQNILLDDHYNA-RISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEW- 340
S I H DIKPQN+LLD ++ DFG AK+L + ++ Y APE
Sbjct: 159 --SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXIC---SRYYRAPELI 213
Query: 341 YRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMG 374
+ + T +D++S G ++ E++ + F E G
Sbjct: 214 FGATNYTTNIDIWSTGCVMAELMQGQPLFPGESG 247
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 88/177 (49%), Gaps = 17/177 (9%)
Query: 195 VAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLLGF------CDEGQNRLLVYEFL 246
VAVKKL R FQ+ K E+V++ +HKN++ LL +E Q+ LV E +
Sbjct: 52 VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 247 NNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNA 306
+ L + L + + +Q+ G+ +LH S+ IIH D+KP NI++
Sbjct: 112 D-ANLCQVIHMEL--DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTL 165
Query: 307 RISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEII 363
+I DFGLA+ N + T T+ Y APE A VD++S G ++ E++
Sbjct: 166 KILDFGLARTACTN---FMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELV 219
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 9/200 (4%)
Query: 173 GRGSFGIVY--KGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL- 229
G+GSFG V+ K + + A+ V K + K E ++ + +H +V+L
Sbjct: 33 GQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLH 92
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
F EG+ L+ +FL G L + L K ++ F +A L L S II
Sbjct: 93 YAFQTEGK-LYLILDFLRGGDLFTRLS---KEVMFTEEDVKFYLAELALALDHLHSLGII 148
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+NILLD+ + +++DFGL+K ++ K + GT Y+APE + T
Sbjct: 149 YRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY--SFCGTVEYMAPEVVNRRGHTQS 206
Query: 350 VDVYSFGVLLLEIISCRKSF 369
D +SFGVL+ E+++ F
Sbjct: 207 ADWWSFGVLMFEMLTGTLPF 226
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 38/214 (17%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V T+T VAVKKL R FQ K E+ ++ H+N++ LL
Sbjct: 31 GSGAYGSVCAAF--DTKTGLR-VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLHE 282
++ E N+ L + L G N+ L + + +QI RGL Y+H
Sbjct: 88 DVFTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 142
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S+ IIH D+KP N+ +++ +I D GLA+ + GYVA WYR
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMT-----------GYVATRWYR 189
Query: 343 KSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
I VD++S G ++ E+++ R F
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 36/222 (16%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG------------------- 207
K+E G+GS+G+V E T + K + Q G
Sbjct: 16 TLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQ 75
Query: 208 ----EKEFKNEVVVIGQTHHKNLVRLLGFCDEGQ--NRLLVYEFLNNGTLASFLFGNLKP 261
++ E+ ++ + H N+V+L+ D+ + +V+E +N G + LKP
Sbjct: 76 PRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV--PTLKP 133
Query: 262 SWNLRTNIAFQ-IARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLN 320
+ FQ + +G+ YLH +IIH DIKP N+L+ + + +I+DFG++
Sbjct: 134 LSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSN--EFK 188
Query: 321 QSKTIKTAIRGTKGYVAPEWY---RKSTITAKVDVYSFGVLL 359
S + + GT ++APE RK +DV++ GV L
Sbjct: 189 GSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 35/212 (16%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG--EKEFKNEVVVIGQTHHKNLVRLL 230
G G++G V + + S VA+KKL R FQ K E++++ H+N++ LL
Sbjct: 51 GSGAYGSVCSAI---DKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 107
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN------IAFQIARGLLYLHEDC 284
+ Y+F + F+ +L+ + + + +Q+ +GL Y+H
Sbjct: 108 DVFTPASSLRNFYDFY---LVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIH--- 161
Query: 285 SSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKS 344
S+ ++H D+KP N+ +++ +I DFGLA + A GYV WYR
Sbjct: 162 SAGVVHRDLKPGNLAVNEDCELKILDFGLA-----------RHADAEMTGYVVTRWYRAP 210
Query: 345 TI-------TAKVDVYSFGVLLLEIISCRKSF 369
+ VD++S G ++ E+++ + F
Sbjct: 211 EVILSWMHYNQTVDIWSVGCIMAEMLTGKTLF 242
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 9/200 (4%)
Query: 173 GRGSFGIVY--KGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL- 229
G+GSFG V+ K + + A+ V K + K E ++ + +H +V+L
Sbjct: 34 GQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLH 93
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
F EG+ L+ +FL G L + L K ++ F +A L L S II
Sbjct: 94 YAFQTEGK-LYLILDFLRGGDLFTRLS---KEVMFTEEDVKFYLAELALALDHLHSLGII 149
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+NILLD+ + +++DFGL+K ++ K + GT Y+APE + T
Sbjct: 150 YRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY--SFCGTVEYMAPEVVNRRGHTQS 207
Query: 350 VDVYSFGVLLLEIISCRKSF 369
D +SFGVL+ E+++ F
Sbjct: 208 ADWWSFGVLMFEMLTGTLPF 227
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 101/217 (46%), Gaps = 18/217 (8%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTT---AVAVKKLDRVFQDGEKEFKN-EVVVIGQTH 222
NF G+GSFG V+ + R T AV + K D V QD + E E V+
Sbjct: 344 NFLMVLGKGSFG----KVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG 399
Query: 223 HKNLVRLLGFCDEGQNRL-LVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLY 279
+ L C + +RL V E++N G L + G K + A +IA GL +
Sbjct: 400 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAV--FYAAEIAIGLFF 457
Query: 280 LHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPE 339
L S II+ D+K N++LD + +I+DFG+ K + T GT Y+APE
Sbjct: 458 LQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTT--KXFCGTPDYIAPE 512
Query: 340 WYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE 376
VD ++FGVLL E+++ + F+ E +E
Sbjct: 513 IIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 549
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 116/265 (43%), Gaps = 20/265 (7%)
Query: 144 PGDGTVETNLRCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDR- 202
PG G+++ + F + G GSF V V+ ++ A+K L++
Sbjct: 15 PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTV---VLARELATSREYAIKILEKR 71
Query: 203 -VFQDGEKEF-KNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGN 258
+ ++ + + E V+ + H V+L + + + NG L ++ G+
Sbjct: 72 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 131
Query: 259 LKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLT 318
+ R A +I L YLH IIH D+KP+NILL++ + +I+DFG AK+L+
Sbjct: 132 FDETCT-RFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 186
Query: 319 LNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYA 378
+ GT YV+PE + + D+++ G ++ ++++ F G EY
Sbjct: 187 PESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYL 244
Query: 379 ILT-----DWAFDCYRNGKLDDLVE 398
I ++ F K DLVE
Sbjct: 245 IFQKIIKLEYDFPAAFFPKARDLVE 269
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 20/205 (9%)
Query: 173 GRGSFGIVYKGVIETTRTSTTA--VAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLV 227
G+G+F V + R T VAVK +D+ + +K F+ EV ++ +H N+V
Sbjct: 24 GKGNFAKV-----KLARHVLTGREVAVKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIV 77
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+L + + LV E+ + G + +L + + QI + Y H+
Sbjct: 78 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ---KY 134
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTL-NQSKTIKTAIRGTKGYVAPEWYR-KST 345
I+H D+K +N+LLD N +I+DFG + T+ N+ T G+ Y APE ++ K
Sbjct: 135 IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFC----GSPPYAAPELFQGKKY 190
Query: 346 ITAKVDVYSFGVLLLEIISCRKSFD 370
+VDV+S GV+L ++S FD
Sbjct: 191 DGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 105/226 (46%), Gaps = 34/226 (15%)
Query: 168 FKEEAGRGSFGIVYKGV---IETTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQT-H 222
F + G G+FG V I T S VAVK L E+E +E+ ++ Q
Sbjct: 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQ-VAVKMLKEKADSSEREALMSELKMMTQLGS 107
Query: 223 HKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL-------------FGNLK-----PSWN 264
H+N+V LLG C L++E+ G L ++L + N K N
Sbjct: 108 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 167
Query: 265 LRTN-----IAFQIARGLLYLH-EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLT 318
+ T A+Q+A+G+ +L + C +H D+ +N+L+ +I DFGLA+ +
Sbjct: 168 VLTFEDLLCFAYQVAKGMEFLEFKSC----VHRDLAARNVLVTHGKVVKICDFGLARDIM 223
Query: 319 LNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIIS 364
+ + ++ R ++APE + T K DV+S+G+LL EI S
Sbjct: 224 SDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 13/204 (6%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRV---FQDGEKEFKNEVVVIGQTHHKNLVRL 229
G G+FG V G + T VAVK L+R D + K E+ + H ++++L
Sbjct: 20 GVGTFGKVKIGEHQLT---GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ +V E+++ G L ++ + + + QI + Y H ++
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR---HMVV 133
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITA- 348
H D+KP+N+LLD H NA+I+DFGL+ +++ + ++ + G+ Y APE
Sbjct: 134 HRDLKPENVLLDAHMNAKIADFGLSNMMS--DGEFLRDSC-GSPNYAAPEVISGRLYAGP 190
Query: 349 KVDVYSFGVLLLEIISCRKSFDIE 372
+VD++S GV+L ++ FD E
Sbjct: 191 EVDIWSCGVILYALLCGTLPFDDE 214
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 104/212 (49%), Gaps = 12/212 (5%)
Query: 159 KALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVI 218
K EE D E+ G GS+G VYK + + + VA+K++ + +E E+ ++
Sbjct: 25 KQPEEVFDVL-EKLGEGSYGSVYKAI---HKETGQIVAIKQVP--VESDLQEIIKEISIM 78
Query: 219 GQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL-FGNLKPSWNLRTNIAFQIARGL 277
Q ++V+ G + + +V E+ G+++ + N + + I +GL
Sbjct: 79 QQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGL 138
Query: 278 LYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVA 337
YLH + IH DIK NILL+ +A+++DFG+A LT +K + + GT ++A
Sbjct: 139 EYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAK--RNXVIGTPFWMA 193
Query: 338 PEWYRKSTITAKVDVYSFGVLLLEIISCRKSF 369
PE ++ D++S G+ +E+ + +
Sbjct: 194 PEVIQEIGYNCVADIWSLGITAIEMAEGKPPY 225
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 93/200 (46%), Gaps = 11/200 (5%)
Query: 165 TDNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH 222
TD ++ E+ G+G+F +V + V T A + +D +K + E +
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQK-LEREARICRLLK 61
Query: 223 HKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHE 282
H N+VRL E LV++ + G L + S ++ QI +L+ H+
Sbjct: 62 HSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ 121
Query: 283 DCSSQIIHCDIKPQNILLDDHYNA---RISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPE 339
++H D+KP+N+LL +++DFGLA + +Q A GT GY++PE
Sbjct: 122 ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFA--GTPGYLSPE 176
Query: 340 WYRKSTITAKVDVYSFGVLL 359
RK VD+++ GV+L
Sbjct: 177 VLRKEAYGKPVDIWACGVIL 196
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 104/207 (50%), Gaps = 23/207 (11%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKL---------DRVFQDGEKEFKNEVVVIGQTHH 223
G+GSFG V+ V + TR + + K+ DRV E++ ++ +H
Sbjct: 37 GQGSFGKVFL-VRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERD------ILADVNH 89
Query: 224 KNLVRL-LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHE 282
+V+L F EG+ L+ +FL G L + L + + ++A GL +LH
Sbjct: 90 PFVVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLH- 147
Query: 283 DCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR 342
S II+ D+KP+NILLD+ + +++DFGL+K ++ K + GT Y+APE
Sbjct: 148 --SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAY--SFCGTVEYMAPEVVN 203
Query: 343 KSTITAKVDVYSFGVLLLEIISCRKSF 369
+ + D +S+GVL+ E+++ F
Sbjct: 204 RQGHSHSADWWSYGVLMFEMLTGSLPF 230
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 99/205 (48%), Gaps = 20/205 (9%)
Query: 173 GRGSFGIVYKGVIETTRTSTTA--VAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLV 227
G+G+F V + R T VAVK +D+ + +K F+ EV ++ +H N+V
Sbjct: 23 GKGNFAKV-----KLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIV 76
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+L + + LV E+ + G + +L + + QI + Y H+
Sbjct: 77 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF--- 133
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTL-NQSKTIKTAIRGTKGYVAPEWYR-KST 345
I+H D+K +N+LLD N +I+DFG + T N+ T G+ Y APE ++ K
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC----GSPPYAAPELFQGKKY 189
Query: 346 ITAKVDVYSFGVLLLEIISCRKSFD 370
+VDV+S GV+L ++S FD
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 92/195 (47%), Gaps = 13/195 (6%)
Query: 170 EEAGRGSFGIVYK--GVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 227
EE G+G+F +V + V+ + + KKL +D +K + E + H N+V
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSA--RDHQK-LEREARICRLLKHPNIV 84
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
RL E + L+++ + G L + S ++ QI +L+ H+
Sbjct: 85 RLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ---MG 141
Query: 288 IIHCDIKPQNILLDDHYNA---RISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKS 344
++H D+KP+N+LL +++DFGLA + Q A GT GY++PE RK
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA--GTPGYLSPEVLRKD 199
Query: 345 TITAKVDVYSFGVLL 359
VD+++ GV+L
Sbjct: 200 PYGKPVDLWACGVIL 214
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 127/294 (43%), Gaps = 32/294 (10%)
Query: 168 FKEEAGRGSFGIVYKGVIETT----RTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHH 223
F E G+G+F ++KGV + T V +K LD+ ++ + F ++ + H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 224 KNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN---LKPSWNLRTNIAFQIARGLLYL 280
K+LV G C G +LV EF+ G+L ++L N + W L +A Q+A + +L
Sbjct: 72 KHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLE--VAKQLAAAMHFL 129
Query: 281 HEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTI--KTAIRGTKGYVAP 338
E+ +IH ++ +NILL + + + KL S T+ K ++ +V P
Sbjct: 130 EENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPP 186
Query: 339 EWYRKS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLV 397
E + D +SFG L EI S G + + A D R + +
Sbjct: 187 ECIENPKNLNLATDKWSFGTTLWEICS---------GGDKPLS---ALDSQRKLQFYE-- 232
Query: 398 EGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEVDVPPNPS 451
D + K E +++ C+ +P RP+ R + + L + D+ P S
Sbjct: 233 --DRHQLPAPKAAELANLINN-CMDYEPDHRPSFRAIIRDLNSLFTPDLVPRGS 283
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 99/205 (48%), Gaps = 20/205 (9%)
Query: 173 GRGSFGIVYKGVIETTRTSTTA--VAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLV 227
G+G+F V + R T VAVK +D+ + +K F+ EV ++ +H N+V
Sbjct: 23 GKGNFAKV-----KLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIV 76
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+L + + LV E+ + G + +L + + QI + Y H+
Sbjct: 77 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF--- 133
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTL-NQSKTIKTAIRGTKGYVAPEWYR-KST 345
I+H D+K +N+LLD N +I+DFG + T N+ T G+ Y APE ++ K
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC----GSPPYAAPELFQGKKY 189
Query: 346 ITAKVDVYSFGVLLLEIISCRKSFD 370
+VDV+S GV+L ++S FD
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 129/286 (45%), Gaps = 53/286 (18%)
Query: 169 KEEAGRGSFG-IVYKGVIETTRTSTTAVAVKK-LDRVFQDGEKEFKNEVVVIGQTHHKNL 226
K+ G G+ G IVY+G+ + VAVK+ L F ++E + ++ H N+
Sbjct: 29 KDVLGHGAEGTIVYRGMFDNR-----DVAVKRILPECFSFADREVQ---LLRESDEHPNV 80
Query: 227 VRLLGFCDEGQNRLLVYEF-LNNGTLASFL----FGNL--KPSWNLRTNIAFQIARGLLY 279
+R FC E + L TL ++ F +L +P L+ Q GL +
Sbjct: 81 IRY--FCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQ-----QTTSGLAH 133
Query: 280 LHEDCSSQIIHCDIKPQNILLD-----DHYNARISDFGLAKLLTL-NQSKTIKTAIRGTK 333
LH S I+H D+KP NIL+ A ISDFGL K L + S + ++ + GT+
Sbjct: 134 LH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTE 190
Query: 334 GYVAPEWYR---KSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDW-AFDCY 388
G++APE K T VD++S G + +IS F + + IL + DC
Sbjct: 191 GWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCL 250
Query: 389 RNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKV 434
K +D++ ++ +EK++ + DP RP+ + V
Sbjct: 251 HPEKHEDVIAREL--------IEKMIAM-------DPQKRPSAKHV 281
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 127/294 (43%), Gaps = 32/294 (10%)
Query: 168 FKEEAGRGSFGIVYKGVIETT----RTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHH 223
F E G+G+F ++KGV + T V +K LD+ ++ + F ++ + H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 224 KNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN---LKPSWNLRTNIAFQIARGLLYL 280
K+LV G C G +LV EF+ G+L ++L N + W L +A Q+A + +L
Sbjct: 72 KHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLE--VAKQLAWAMHFL 129
Query: 281 HEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTI--KTAIRGTKGYVAP 338
E+ +IH ++ +NILL + + + KL S T+ K ++ +V P
Sbjct: 130 EENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPP 186
Query: 339 EWYRKS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLV 397
E + D +SFG L EI S G + + A D R + +
Sbjct: 187 ECIENPKNLNLATDKWSFGTTLWEICS---------GGDKPLS---ALDSQRKLQFYE-- 232
Query: 398 EGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEVDVPPNPS 451
D + K E +++ C+ +P RP+ R + + L + D+ P S
Sbjct: 233 --DRHQLPAPKAAELANLINN-CMDYEPDHRPSFRAIIRDLNSLFTPDLVPRGS 283
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 26/208 (12%)
Query: 173 GRGSFGIV---YKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLV 227
G G+ GIV Y V++ VA+KKL R FQ+ K E+V++ +HKN++
Sbjct: 33 GSGAQGIVCAAYDAVLDRN------VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNII 86
Query: 228 RLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 281
LL +E Q+ LV E ++ L + ++ + + +Q+ G+ +LH
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVI--QMELDHERMSYLLYQMLCGIKHLH 143
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 197
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRKSF 369
VD++S G ++ E++ + F
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHKILF 225
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 109/242 (45%), Gaps = 15/242 (6%)
Query: 144 PGDGTVETNLRCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDR- 202
PG G+++ + F + G GSF V V+ ++ A+K L++
Sbjct: 13 PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTV---VLARELATSREYAIKILEKR 69
Query: 203 -VFQDGEKEF-KNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGN 258
+ ++ + + E V+ + H V+L + + + NG L ++ G+
Sbjct: 70 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 129
Query: 259 LKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLT 318
+ R A +I L YLH IIH D+KP+NILL++ + +I+DFG AK+L+
Sbjct: 130 FDETCT-RFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 184
Query: 319 LNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYA 378
+ + GT YV+PE + + D+++ G ++ ++++ F G EY
Sbjct: 185 PESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYL 242
Query: 379 IL 380
I
Sbjct: 243 IF 244
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 18/204 (8%)
Query: 173 GRGSFGIVYKGVIETTRTSTTA--VAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLV 227
G+G+F V + R T VAVK +D+ + +K F+ EV + +H N+V
Sbjct: 23 GKGNFAKV-----KLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIXKVLNHPNIV 76
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+L + + LV E+ + G + +L + + QI + Y H+
Sbjct: 77 KLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKF--- 133
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR-KSTI 346
I+H D+K +N+LLD N +I+DFG + T A G Y APE ++ K
Sbjct: 134 IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNK---LDAFCGAPPYAAPELFQGKKYD 190
Query: 347 TAKVDVYSFGVLLLEIISCRKSFD 370
+VDV+S GV+L ++S FD
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 26/208 (12%)
Query: 173 GRGSFGIV---YKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLV 227
G G+ GIV Y V++ VA+KKL R FQ+ K E+V++ +HKN++
Sbjct: 33 GSGAQGIVCAAYDAVLDRN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 86
Query: 228 RLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 281
LL +E Q+ LV E ++ L + L + + +Q+ G+ +LH
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQMEL--DHERMSYLLYQMLXGIKHLH 143
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 197
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRKSF 369
VD++S G ++ E++ + F
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHKILF 225
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 104/214 (48%), Gaps = 26/214 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL-L 230
G GSFG+VY+ + S VA+KK V QD K FKN E+ ++ + H N+VRL
Sbjct: 29 GNGSFGVVYQAKLCD---SGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLRY 80
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLHE 282
F G+ + +VY L + ++ + + + +Q+ R L Y+H
Sbjct: 81 FFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 139
Query: 283 DCSSQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S I H DIKPQN+LLD D ++ DFG AK L + ++ Y APE
Sbjct: 140 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---SRYYRAPELI 194
Query: 342 RKST-ITAKVDVYSFGVLLLEIISCRKSFDIEMG 374
+T T+ +DV+S G +L E++ + F + G
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 26/208 (12%)
Query: 173 GRGSFGIV---YKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLV 227
G G+ GIV Y V++ VA+KKL R FQ+ K E+V++ +HKN++
Sbjct: 26 GSGAQGIVCAAYDAVLDRN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 79
Query: 228 RLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 281
LL +E Q+ LV E ++ L + L + + +Q+ G+ +LH
Sbjct: 80 SLLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQMEL--DHERMSYLLYQMLXGIKHLH 136
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 137 ---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 190
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRKSF 369
VD++S G ++ E++ + F
Sbjct: 191 LGMGYKENVDIWSVGCIMGEMVRHKILF 218
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 84/190 (44%), Gaps = 10/190 (5%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G G++G V + T +KK +EV V+ Q H N+++L F
Sbjct: 30 GSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEF 89
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCD 292
++ +N LV E G L + K S I Q+ G YLH+ I+H D
Sbjct: 90 FEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHK---HNIVHRD 146
Query: 293 IKPQNILLDDHYN---ARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+KP+N+LL+ +I DFGL+ + + GT Y+APE RK K
Sbjct: 147 LKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL---GTAYYIAPEVLRKK-YDEK 202
Query: 350 VDVYSFGVLL 359
DV+S GV+L
Sbjct: 203 CDVWSCGVIL 212
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEF-KNEVVVIGQTHHKNLVRLLG 231
GRGS+ V ++ T A+ V K + V D + ++ + E V Q + + L
Sbjct: 18 GRGSYAKVLLVRLKKT-DRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 76
Query: 232 FCDEGQNRLL-VYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHEDCSSQII 289
C + ++RL V E++N G L + K P + R A +I+ L YLHE II
Sbjct: 77 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNYLHE---RGII 132
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+K N+LLD + +++D+G+ K L T + GT Y+APE R
Sbjct: 133 YRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTT-SXFCGTPNYIAPEILRGEDYGFS 190
Query: 350 VDVYSFGVLLLEIISCRKSFDI 371
VD ++ GVL+ E+++ R FDI
Sbjct: 191 VDWWALGVLMFEMMAGRSPFDI 212
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 17/211 (8%)
Query: 165 TDNF--KEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH 222
TD + KE+ G GS+ + + + + T AVK +D+ +D +E + +++
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXE---FAVKIIDKSKRDPTEEIE---ILLRYGQ 74
Query: 223 HKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHE 282
H N++ L D+G+ +V E G L + S + + F I + + YLH
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLH- 133
Query: 283 DCSSQIIHCDIKPQNIL-LDDHYNA---RISDFGLAKLLTLNQSKTIKTAIRGTKGYVAP 338
+ ++H D+KP NIL +D+ N RI DFG AK L T +VAP
Sbjct: 134 --AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY--TANFVAP 189
Query: 339 EWYRKSTITAKVDVYSFGVLLLEIISCRKSF 369
E + A D++S GVLL ++ F
Sbjct: 190 EVLERQGYDAACDIWSLGVLLYTXLTGYTPF 220
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEF-KNEVVVIGQTHHKNLVRLLG 231
GRGS+ V ++ T A+ V K + V D + ++ + E V Q + + L
Sbjct: 29 GRGSYAKVLLVRLKKT-DRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 87
Query: 232 FCDEGQNRLL-VYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHEDCSSQII 289
C + ++RL V E++N G L + K P + R A +I+ L YLHE II
Sbjct: 88 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNYLHE---RGII 143
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+K N+LLD + +++D+G+ K L T + GT Y+APE R
Sbjct: 144 YRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTT-SXFCGTPNYIAPEILRGEDYGFS 201
Query: 350 VDVYSFGVLLLEIISCRKSFDI 371
VD ++ GVL+ E+++ R FDI
Sbjct: 202 VDWWALGVLMFEMMAGRSPFDI 223
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 125/283 (44%), Gaps = 24/283 (8%)
Query: 173 GRGSFGIVYKGVIETTRTST-TAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 230
G G FG V + T T VAVK L + ++ E+ ++ +H+++V+
Sbjct: 18 GEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYK 77
Query: 231 GFC-DEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQI 288
G C D+G+ + LV E++ G+L +L + L A QI G+ YLH +
Sbjct: 78 GCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL-FAQQICEGMAYLH---AQHY 133
Query: 289 IHCDIKPQNILLDDHYNARISDFGLAKLLTL-NQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
IH + +N+LLD+ +I DFGLAK + ++ ++ + APE ++
Sbjct: 134 IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFY 193
Query: 348 AKVDVYSFGVLLLEII-------SCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGD 400
DV+SFGV L E++ S F +G +T +L +L+E
Sbjct: 194 YASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVL--------RLTELLERG 245
Query: 401 MEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVE 443
+C ++ + C + + S RPT + + +L+ E
Sbjct: 246 ERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQE 288
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 169 KEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVR 228
KE G GS+ + V + T AVK +D+ +D +E + +++ H N++
Sbjct: 32 KETIGVGSYSECKRCVHKATNME---YAVKVIDKSKRDPSEEIE---ILLRYGQHPNIIT 85
Query: 229 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQI 288
L D+G++ LV E + G L + S + + I + + YLH S +
Sbjct: 86 LKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLH---SQGV 142
Query: 289 IHCDIKPQNIL-LDDHYNA---RISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKS 344
+H D+KP NIL +D+ N RI DFG AK L + T +VAPE ++
Sbjct: 143 VHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY--TANFVAPEVLKRQ 200
Query: 345 TITAKVDVYSFGVLLLEIISCRKSF 369
D++S G+LL +++ F
Sbjct: 201 GYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 98/213 (46%), Gaps = 28/213 (13%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLD--RVFQDGEKEFKNEVVVIGQTHHKNLV 227
++ G GSFG K ++ + +K+++ R+ +E + EV V+ H N+V
Sbjct: 30 QKIGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIV 86
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQ----------IARGL 277
+ +E + +V ++ G L + N + + FQ I L
Sbjct: 87 QYRESFEENGSLYIVMDYCEGGDLFKRI--------NAQKGVLFQEDQILDWFVQICLAL 138
Query: 278 LYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVA 337
++H+ +I+H DIK QNI L ++ DFG+A++ LN + + A GT Y++
Sbjct: 139 KHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARV--LNSTVELARACIGTPYYLS 193
Query: 338 PEWYRKSTITAKVDVYSFGVLLLEIISCRKSFD 370
PE K D+++ G +L E+ + + +F+
Sbjct: 194 PEICENKPYNNKSDIWALGCVLYELCTLKHAFE 226
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 26/202 (12%)
Query: 173 GRGSFGIV---YKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLV 227
G G+ GIV Y ++E VA+KKL R FQ+ K E+V++ +HKN++
Sbjct: 33 GSGAQGIVCAAYDAILERN------VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNII 86
Query: 228 RLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 281
LL +E Q+ +V E ++ L+ + ++ + + +Q+ G+ +LH
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVI--QMELDHERMSYLLYQMLVGIKHLH 143
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 197
Query: 342 RKSTITAKVDVYSFGVLLLEII 363
VD++S G ++ E+I
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMI 219
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 108/234 (46%), Gaps = 39/234 (16%)
Query: 160 ALEEATDNFKEEA--GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVV 217
+L A+D F+E A G+G+FG V K + A+KK+ R ++ +EV++
Sbjct: 1 SLRYASD-FEEIAVLGQGAFGQVVKA---RNALDSRYYAIKKI-RHTEEKLSTILSEVML 55
Query: 218 IGQTHHKNLVRLLGFCDEGQN-------------RLLVYEFLNNGTLASFLFG-NLKPSW 263
+ +H+ +VR E +N + E+ N TL + NL
Sbjct: 56 LASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQR 115
Query: 264 NLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAK-------L 316
+ + QI L Y+H S IIH D+KP NI +D+ N +I DFGLAK +
Sbjct: 116 DEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDI 172
Query: 317 LTLN------QSKTIKTAIRGTKGYVAPEWYRKS-TITAKVDVYSFGVLLLEII 363
L L+ S + +AI GT YVA E + K+D+YS G++ E+I
Sbjct: 173 LKLDSQNLPGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 125/283 (44%), Gaps = 24/283 (8%)
Query: 173 GRGSFGIVYKGVIETTRTST-TAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKNLVRLL 230
G G FG V + T T VAVK L + ++ E+ ++ +H+++V+
Sbjct: 17 GEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYK 76
Query: 231 GFC-DEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQI 288
G C D+G+ + LV E++ G+L +L + L A QI G+ YLH +
Sbjct: 77 GCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL-FAQQICEGMAYLH---AQHY 132
Query: 289 IHCDIKPQNILLDDHYNARISDFGLAKLLTL-NQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
IH + +N+LLD+ +I DFGLAK + ++ ++ + APE ++
Sbjct: 133 IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFY 192
Query: 348 AKVDVYSFGVLLLEII-------SCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGD 400
DV+SFGV L E++ S F +G +T +L +L+E
Sbjct: 193 YASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVL--------RLTELLERG 244
Query: 401 MEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVE 443
+C ++ + C + + S RPT + + +L+ E
Sbjct: 245 ERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQE 287
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEF-KNEVVVIGQTHHKNLVRLLG 231
GRGS+ V ++ T A+ V K + V D + ++ + E V Q + + L
Sbjct: 14 GRGSYAKVLLVRLKKT-DRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 72
Query: 232 FCDEGQNRLL-VYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHEDCSSQII 289
C + ++RL V E++N G L + K P + R A +I+ L YLHE II
Sbjct: 73 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNYLHE---RGII 128
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+K N+LLD + +++D+G+ K L T + GT Y+APE R
Sbjct: 129 YRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTT-SXFCGTPNYIAPEILRGEDYGFS 186
Query: 350 VDVYSFGVLLLEIISCRKSFDI 371
VD ++ GVL+ E+++ R FDI
Sbjct: 187 VDWWALGVLMFEMMAGRSPFDI 208
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 26/208 (12%)
Query: 173 GRGSFGIV---YKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLV 227
G G+ GIV Y V++ VA+KKL R FQ+ K E+V++ +HKN++
Sbjct: 33 GSGAQGIVCAAYDAVLDRN------VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNII 86
Query: 228 RLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 281
LL +E Q+ LV E ++ L + ++ + + +Q+ G+ +LH
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHLH 143
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 197
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRKSF 369
VD++S G ++ E++ + F
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHKILF 225
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 84/190 (44%), Gaps = 10/190 (5%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G G++G V + T +KK +EV V+ Q H N+++L F
Sbjct: 13 GSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEF 72
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCD 292
++ +N LV E G L + K S I Q+ G YLH+ I+H D
Sbjct: 73 FEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHK---HNIVHRD 129
Query: 293 IKPQNILLDDHYN---ARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+KP+N+LL+ +I DFGL+ + + GT Y+APE RK K
Sbjct: 130 LKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL---GTAYYIAPEVLRKK-YDEK 185
Query: 350 VDVYSFGVLL 359
DV+S GV+L
Sbjct: 186 CDVWSCGVIL 195
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 11/206 (5%)
Query: 168 FKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDR-VFQDGEKEFKNEVVVIGQTHHKNL 226
E G G F K + + VA+K +D+ K E+ + H+++
Sbjct: 14 LHETIGTGGFA---KVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHI 70
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF-QIARGLLYLHEDCS 285
+L + +V E+ G L ++ + S T + F QI + Y+H S
Sbjct: 71 CQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEE-ETRVVFRQIVSAVAYVH---S 126
Query: 286 SQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR-KS 344
H D+KP+N+L D+++ ++ DFGL N+ ++T G+ Y APE + KS
Sbjct: 127 QGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCC-GSLAYAAPELIQGKS 185
Query: 345 TITAKVDVYSFGVLLLEIISCRKSFD 370
+ ++ DV+S G+LL ++ FD
Sbjct: 186 YLGSEADVWSMGILLYVLMCGFLPFD 211
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 18/204 (8%)
Query: 173 GRGSFGIVYKGVIETTRTSTTA--VAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLV 227
G+G+F V + R T VA+K +D+ + +K F+ EV ++ +H N+V
Sbjct: 21 GKGNFAKV-----KLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIV 74
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+L + + L+ E+ + G + +L + + + QI + Y H+ +
Sbjct: 75 KLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ---KR 131
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR-KSTI 346
I+H D+K +N+LLD N +I+DFG + T+ G+ Y APE ++ K
Sbjct: 132 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK---LDTFCGSPPYAAPELFQGKKYD 188
Query: 347 TAKVDVYSFGVLLLEIISCRKSFD 370
+VDV+S GV+L ++S FD
Sbjct: 189 GPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 116/265 (43%), Gaps = 20/265 (7%)
Query: 144 PGDGTVETNLRCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDR- 202
PG G+++ + F + G GSF V V+ ++ A+K L++
Sbjct: 12 PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTV---VLARELATSREYAIKILEKR 68
Query: 203 -VFQDGEKEF-KNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGN 258
+ ++ + + E V+ + H V+L + + + NG L ++ G+
Sbjct: 69 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 128
Query: 259 LKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLT 318
+ R A +I L YLH IIH D+KP+NILL++ + +I+DFG AK+L+
Sbjct: 129 FDETCT-RFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 183
Query: 319 LNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYA 378
+ GT YV+PE + + D+++ G ++ ++++ F G EY
Sbjct: 184 PESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYL 241
Query: 379 ILT-----DWAFDCYRNGKLDDLVE 398
I ++ F K DLVE
Sbjct: 242 IFQKIIKLEYDFPEKFFPKARDLVE 266
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 113/274 (41%), Gaps = 24/274 (8%)
Query: 167 NFKEEA--GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHK 224
NF+ E GRG F VY+ V+ D + + E+ ++ Q +H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 225 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAF--QIARGLLYL 280
N+++ E +V E + G L+ + F K RT + Q+ L ++
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 281 HEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEW 340
H S +++H DIKP N+ + ++ D GL + + T ++ GT Y++PE
Sbjct: 153 H---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS--SKTTAAHSLVGTPYYMSPER 207
Query: 341 YRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGD 400
++ K D++S G LL E+ + + F + Y++ C + + + D
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL-------CKK------IEQCD 254
Query: 401 MEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKV 434
+ E+L + CI DP RP + V
Sbjct: 255 YPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYV 288
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 20/205 (9%)
Query: 173 GRGSFGIVYKGVIETTRTSTTA--VAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLV 227
G+G+F V + R T VAV+ +D+ + +K F+ EV ++ +H N+V
Sbjct: 23 GKGNFAKV-----KLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIV 76
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+L + + LV E+ + G + +L + + QI + Y H+
Sbjct: 77 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF--- 133
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTL-NQSKTIKTAIRGTKGYVAPEWYR-KST 345
I+H D+K +N+LLD N +I+DFG + T N+ T G+ Y APE ++ K
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC----GSPPYAAPELFQGKKY 189
Query: 346 ITAKVDVYSFGVLLLEIISCRKSFD 370
+VDV+S GV+L ++S FD
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 106/242 (43%), Gaps = 15/242 (6%)
Query: 144 PGDGTVETNLRCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDR- 202
PG G+++ + F + G GSF V V+ ++ A+K L++
Sbjct: 12 PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTV---VLARELATSREYAIKILEKR 68
Query: 203 --VFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGN 258
+ ++ E V+ + H V+L + + + NG L ++ G+
Sbjct: 69 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 128
Query: 259 LKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLT 318
+ R A +I L YLH IIH D+KP+NILL++ + +I+DFG AK+L+
Sbjct: 129 FDETCT-RFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 183
Query: 319 LNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYA 378
+ GT YV+PE + + D+++ G ++ ++++ F G EY
Sbjct: 184 PESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYL 241
Query: 379 IL 380
I
Sbjct: 242 IF 243
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 116/265 (43%), Gaps = 20/265 (7%)
Query: 144 PGDGTVETNLRCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDR- 202
PG G+++ + F + G GSF V V+ ++ A+K L++
Sbjct: 13 PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTV---VLARELATSREYAIKILEKR 69
Query: 203 -VFQDGEKEF-KNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGN 258
+ ++ + + E V+ + H V+L + + + NG L ++ G+
Sbjct: 70 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 129
Query: 259 LKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLT 318
+ R A +I L YLH IIH D+KP+NILL++ + +I+DFG AK+L+
Sbjct: 130 FDETCT-RFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 184
Query: 319 LNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYA 378
+ GT YV+PE + + D+++ G ++ ++++ F G EY
Sbjct: 185 PESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYL 242
Query: 379 ILT-----DWAFDCYRNGKLDDLVE 398
I ++ F K DLVE
Sbjct: 243 IFQKIIKLEYDFPEKFFPKARDLVE 267
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 108/242 (44%), Gaps = 15/242 (6%)
Query: 144 PGDGTVETNLRCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDR- 202
PG G+++ + F + G GSF V V+ ++ A+K L++
Sbjct: 12 PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTV---VLARELATSREYAIKILEKR 68
Query: 203 -VFQDGEKEF-KNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGN 258
+ ++ + + E V+ + H V+L + + + NG L ++ G+
Sbjct: 69 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 128
Query: 259 LKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLT 318
+ R A +I L YLH IIH D+KP+NILL++ + +I+DFG AK+L+
Sbjct: 129 FDETCT-RFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 183
Query: 319 LNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYA 378
+ GT YV+PE + + D+++ G ++ ++++ F G EY
Sbjct: 184 PESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYL 241
Query: 379 IL 380
I
Sbjct: 242 IF 243
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 108/242 (44%), Gaps = 15/242 (6%)
Query: 144 PGDGTVETNLRCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDR- 202
PG G+++ + F + G GSF V V+ ++ A+K L++
Sbjct: 10 PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTV---VLARELATSREYAIKILEKR 66
Query: 203 -VFQDGEKEF-KNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGN 258
+ ++ + + E V+ + H V+L + + + NG L ++ G+
Sbjct: 67 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 126
Query: 259 LKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLT 318
+ R A +I L YLH IIH D+KP+NILL++ + +I+DFG AK+L+
Sbjct: 127 FDETCT-RFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 181
Query: 319 LNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYA 378
+ GT YV+PE + + D+++ G ++ ++++ F G EY
Sbjct: 182 PESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYL 239
Query: 379 IL 380
I
Sbjct: 240 IF 241
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 17/177 (9%)
Query: 195 VAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLLGF------CDEGQNRLLVYEFL 246
VAVKKL R FQ+ K E+V++ +HKN++ LL +E Q+ LV E +
Sbjct: 50 VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 109
Query: 247 NNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNA 306
+ L + L + + +Q+ G+ +LH S+ IIH D+KP NI++
Sbjct: 110 D-ANLCQVIHMEL--DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTL 163
Query: 307 RISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEII 363
+I DFGLA+ + N + T T+ Y APE VD++S G ++ E++
Sbjct: 164 KILDFGLARTASTN---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELV 217
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 108/242 (44%), Gaps = 15/242 (6%)
Query: 144 PGDGTVETNLRCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDR- 202
PG G+++ + F + G GSF V V+ ++ A+K L++
Sbjct: 10 PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTV---VLARELATSREYAIKILEKR 66
Query: 203 -VFQDGEKEF-KNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGN 258
+ ++ + + E V+ + H V+L + + + NG L ++ G+
Sbjct: 67 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 126
Query: 259 LKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLT 318
+ R A +I L YLH IIH D+KP+NILL++ + +I+DFG AK+L+
Sbjct: 127 FDETCT-RFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 181
Query: 319 LNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYA 378
+ GT YV+PE + + D+++ G ++ ++++ F G EY
Sbjct: 182 PESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYL 239
Query: 379 IL 380
I
Sbjct: 240 IF 241
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 26/202 (12%)
Query: 173 GRGSFGIV---YKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLV 227
G G+ GIV Y ++E VA+KKL R FQ+ K E+V++ +HKN++
Sbjct: 33 GSGAQGIVCAAYDAILERN------VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNII 86
Query: 228 RLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 281
LL +E Q+ +V E ++ L+ + ++ + + +Q+ G+ +LH
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVI--QMELDHERMSYLLYQMLCGIKHLH 143
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 197
Query: 342 RKSTITAKVDVYSFGVLLLEII 363
VD++S G ++ E+I
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMI 219
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 169 KEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVR 228
KE G GS+ + V + T AVK +D+ +D +E + +++ H N++
Sbjct: 32 KETIGVGSYSECKRCVHKATNME---YAVKVIDKSKRDPSEEIE---ILLRYGQHPNIIT 85
Query: 229 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQI 288
L D+G++ LV E + G L + S + + I + + YLH S +
Sbjct: 86 LKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLH---SQGV 142
Query: 289 IHCDIKPQNIL-LDDHYNA---RISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKS 344
+H D+KP NIL +D+ N RI DFG AK L + T +VAPE ++
Sbjct: 143 VHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY--TANFVAPEVLKRQ 200
Query: 345 TITAKVDVYSFGVLLLEIISCRKSF 369
D++S G+LL +++ F
Sbjct: 201 GYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 15/213 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDR--VFQDGEKEF-KNEVVVIGQTHHKNLVRL 229
G GSF V V+ ++ A+K L++ + ++ + + E V+ + H V+L
Sbjct: 38 GEGSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+ + + NG L ++ G+ + R A +I L YLH
Sbjct: 95 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-RFYTA-EIVSALEYLH---GKG 149
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
IIH D+KP+NILL++ + +I+DFG AK+L+ + + GT YV+PE + +
Sbjct: 150 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAC 209
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 380
D+++ G ++ ++++ F G EY I
Sbjct: 210 KSSDLWALGCIIYQLVAGLPPF--RAGNEYLIF 240
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 18/204 (8%)
Query: 173 GRGSFGIVYKGVIETTRTSTTA--VAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLV 227
G+G+F V + R T VAV+ +D+ + +K F+ EV ++ +H N+V
Sbjct: 23 GKGNFAKV-----KLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIV 76
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+L + + LV E+ + G + +L + + QI + Y H+
Sbjct: 77 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF--- 133
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYR-KSTI 346
I+H D+K +N+LLD N +I+DFG + T G+ Y APE ++ K
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDEFCGSPPYAAPELFQGKKYD 190
Query: 347 TAKVDVYSFGVLLLEIISCRKSFD 370
+VDV+S GV+L ++S FD
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 26/208 (12%)
Query: 173 GRGSFGIV---YKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLV 227
G G+ GIV Y V++ VA+KKL R FQ+ K E+V++ +HKN++
Sbjct: 71 GSGAQGIVCAAYDAVLDRN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 124
Query: 228 RLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 281
LL +E Q+ LV E ++ L + ++ + + +Q+ G+ +LH
Sbjct: 125 SLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHLH 181
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 182 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 235
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRKSF 369
VD++S G ++ E++ + F
Sbjct: 236 LGMGYKENVDIWSVGCIMGEMVRHKILF 263
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 103/214 (48%), Gaps = 26/214 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL-L 230
G GSFG+VY+ + S VA+KK V QD K FKN E+ ++ + H N+VRL
Sbjct: 63 GNGSFGVVYQAKLCD---SGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLRY 114
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLHE 282
F G+ + VY L + ++ + + + +Q+ R L Y+H
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 173
Query: 283 DCSSQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S I H DIKPQN+LLD D ++ DFG AK L + ++ Y APE
Sbjct: 174 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---SRYYRAPELI 228
Query: 342 RKST-ITAKVDVYSFGVLLLEIISCRKSFDIEMG 374
+T T+ +DV+S G +L E++ + F + G
Sbjct: 229 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 262
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 12/203 (5%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRLLG 231
G G++G+V +T VA+KK+ Q + E+ ++ + H+N++ +
Sbjct: 52 GEGAYGMVSSAYDHVRKTR---VAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRD 108
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHEDCSSQI 288
+ ++ + + L+ LK +I + QI RGL Y+H S+ +
Sbjct: 109 ILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIH---SANV 165
Query: 289 IHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKT-IKTAIRGTKGYVAPEWYRKST-I 346
+H D+KP N+L++ + +I DFGLA++ T T T+ Y APE S
Sbjct: 166 LHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGY 225
Query: 347 TAKVDVYSFGVLLLEIISCRKSF 369
T +D++S G +L E++S R F
Sbjct: 226 TKSIDIWSVGCILAEMLSNRPIF 248
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 22/251 (8%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDR--VFQDGEKEF-KNEVVVIGQTHHKNLVRL 229
G GSF V V+ ++ A+K L++ + ++ + + E V+ + H V+L
Sbjct: 18 GEGSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 74
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+ + + NG L ++ G+ + R A +I L YLH
Sbjct: 75 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-RFYTA-EIVSALEYLH---GKG 129
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
IIH D+KP+NILL++ + +I+DFG AK+L+ + GT YV+PE + +
Sbjct: 130 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 189
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT-----DWAFDCYRNGKLDDLVEG--D 400
D+++ G ++ ++++ F G EY I ++ F K DLVE
Sbjct: 190 KSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 247
Query: 401 MEAMNDIKCVE 411
++A + C E
Sbjct: 248 LDATKRLGCEE 258
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 22/251 (8%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDR--VFQDGEKEF-KNEVVVIGQTHHKNLVRL 229
G GSF V V+ ++ A+K L++ + ++ + + E V+ + H V+L
Sbjct: 19 GEGSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 75
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+ + + NG L ++ G+ + R A +I L YLH
Sbjct: 76 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-RFYTA-EIVSALEYLH---GKG 130
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
IIH D+KP+NILL++ + +I+DFG AK+L+ + GT YV+PE + +
Sbjct: 131 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 190
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT-----DWAFDCYRNGKLDDLVEG--D 400
D+++ G ++ ++++ F G EY I ++ F K DLVE
Sbjct: 191 KSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 248
Query: 401 MEAMNDIKCVE 411
++A + C E
Sbjct: 249 LDATKRLGCEE 259
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 103/214 (48%), Gaps = 26/214 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL-L 230
G GSFG+VY+ + S VA+KK V QD K FKN E+ ++ + H N+VRL
Sbjct: 48 GNGSFGVVYQAKLCD---SGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLRY 99
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLHE 282
F G+ + VY L + ++ + + + +Q+ R L Y+H
Sbjct: 100 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 158
Query: 283 DCSSQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S I H DIKPQN+LLD D ++ DFG AK L + ++ Y APE
Sbjct: 159 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---SRYYRAPELI 213
Query: 342 RKST-ITAKVDVYSFGVLLLEIISCRKSFDIEMG 374
+T T+ +DV+S G +L E++ + F + G
Sbjct: 214 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 247
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 26/202 (12%)
Query: 173 GRGSFGIV---YKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLV 227
G G+ GIV Y ++E VA+KKL R FQ+ K E+V++ +HKN++
Sbjct: 33 GSGAQGIVCAAYDAILERN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 86
Query: 228 RLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 281
LL +E Q+ +V E ++ L+ + ++ + + +Q+ G+ +LH
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVI--QMELDHERMSYLLYQMLCGIKHLH 143
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 197
Query: 342 RKSTITAKVDVYSFGVLLLEII 363
VD++S G ++ E+I
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMI 219
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 108/213 (50%), Gaps = 20/213 (9%)
Query: 161 LEEATDNFKE--EAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVI 218
+E D+F++ E G G+ G+V+K + + V +KL + + + +N+++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK----VSHKPSGLVMARKL--IHLEIKPAIRNQIIRE 54
Query: 219 GQTHHK-NLVRLLGFC----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQI 273
Q H+ N ++GF +G+ + + E ++ G+L L + + ++ +
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 274 ARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK 333
+GL YL E +I+H D+KP NIL++ ++ DFG++ L ++ + GT+
Sbjct: 114 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVGTR 167
Query: 334 GYVAPEWYRKSTITAKVDVYSFGVLLLEIISCR 366
Y++PE + + + + D++S G+ L+E+ R
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 108/213 (50%), Gaps = 20/213 (9%)
Query: 161 LEEATDNFKE--EAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVI 218
+E D+F++ E G G+ G+V+K + + V +KL + + + +N+++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK----VSHKPSGLVMARKL--IHLEIKPAIRNQIIRE 54
Query: 219 GQTHHK-NLVRLLGFC----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQI 273
Q H+ N ++GF +G+ + + E ++ G+L L + + ++ +
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 274 ARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK 333
+GL YL E +I+H D+KP NIL++ ++ DFG++ L ++ + GT+
Sbjct: 114 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVGTR 167
Query: 334 GYVAPEWYRKSTITAKVDVYSFGVLLLEIISCR 366
Y++PE + + + + D++S G+ L+E+ R
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 22/251 (8%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDR--VFQDGEKEF-KNEVVVIGQTHHKNLVRL 229
G GSF V V+ ++ A+K L++ + ++ + + E V+ + H V+L
Sbjct: 17 GEGSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 73
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+ + + NG L ++ G+ + R A +I L YLH
Sbjct: 74 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-RFYTA-EIVSALEYLH---GKG 128
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
IIH D+KP+NILL++ + +I+DFG AK+L+ + GT YV+PE + +
Sbjct: 129 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 188
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT-----DWAFDCYRNGKLDDLVEG--D 400
D+++ G ++ ++++ F G EY I ++ F K DLVE
Sbjct: 189 KSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 246
Query: 401 MEAMNDIKCVE 411
++A + C E
Sbjct: 247 LDATKRLGCEE 257
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 171 EAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 230
E G G+FG VYK + ++ A K +D ++ +++ E+ ++ H N+V+LL
Sbjct: 44 ELGDGAFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA-FQIARGLLYLHEDCSSQII 289
N ++ EF G + + + +P + + Q L YLH++ +II
Sbjct: 101 DAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KII 157
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTI--KTAIRGTKGYVAPEWY-----R 342
H D+K NIL + +++DFG++ ++TI + + GT ++APE +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSA----KNTRTIQRRDSFIGTPYWMAPEVVMCETSK 213
Query: 343 KSTITAKVDVYSFGVLLLEI 362
K DV+S G+ L+E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 22/251 (8%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDR--VFQDGEKEF-KNEVVVIGQTHHKNLVRL 229
G GSF V V+ ++ A+K L++ + ++ + + E V+ + H V+L
Sbjct: 16 GEGSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 72
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+ + + NG L ++ G+ + R A +I L YLH
Sbjct: 73 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-RFYTA-EIVSALEYLH---GKG 127
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
IIH D+KP+NILL++ + +I+DFG AK+L+ + GT YV+PE + +
Sbjct: 128 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 187
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT-----DWAFDCYRNGKLDDLVEG--D 400
D+++ G ++ ++++ F G EY I ++ F K DLVE
Sbjct: 188 KSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 245
Query: 401 MEAMNDIKCVE 411
++A + C E
Sbjct: 246 LDATKRLGCEE 256
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 103/214 (48%), Gaps = 26/214 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL-L 230
G GSFG+VY+ + S VA+KK V QD K FKN E+ ++ + H N+VRL
Sbjct: 37 GNGSFGVVYQAKLCD---SGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLRY 88
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLHE 282
F G+ + VY L + ++ + + + +Q+ R L Y+H
Sbjct: 89 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 147
Query: 283 DCSSQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S I H DIKPQN+LLD D ++ DFG AK L + ++ Y APE
Sbjct: 148 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---SRYYRAPELI 202
Query: 342 RKST-ITAKVDVYSFGVLLLEIISCRKSFDIEMG 374
+T T+ +DV+S G +L E++ + F + G
Sbjct: 203 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 236
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 103/214 (48%), Gaps = 26/214 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL-L 230
G GSFG+VY+ + S VA+KK V QD K FKN E+ ++ + H N+VRL
Sbjct: 33 GNGSFGVVYQAKLCD---SGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLRY 84
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLHE 282
F G+ + VY L + ++ + + + +Q+ R L Y+H
Sbjct: 85 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 143
Query: 283 DCSSQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S I H DIKPQN+LLD D ++ DFG AK L + ++ Y APE
Sbjct: 144 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---SRYYRAPELI 198
Query: 342 RKST-ITAKVDVYSFGVLLLEIISCRKSFDIEMG 374
+T T+ +DV+S G +L E++ + F + G
Sbjct: 199 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 232
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 108/213 (50%), Gaps = 20/213 (9%)
Query: 161 LEEATDNFKE--EAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVI 218
+E D+F++ E G G+ G+V+K + + V +KL + + + +N+++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK----VSHKPSGLVMARKL--IHLEIKPAIRNQIIRE 54
Query: 219 GQTHHK-NLVRLLGFC----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQI 273
Q H+ N ++GF +G+ + + E ++ G+L L + + ++ +
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 274 ARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK 333
+GL YL E +I+H D+KP NIL++ ++ DFG++ L ++ + GT+
Sbjct: 114 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVGTR 167
Query: 334 GYVAPEWYRKSTITAKVDVYSFGVLLLEIISCR 366
Y++PE + + + + D++S G+ L+E+ R
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 103/214 (48%), Gaps = 26/214 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL-L 230
G GSFG+VY+ + S VA+KK V QD K FKN E+ ++ + H N+VRL
Sbjct: 41 GNGSFGVVYQAKLCD---SGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLRY 92
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLHE 282
F G+ + VY L + ++ + + + +Q+ R L Y+H
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 151
Query: 283 DCSSQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S I H DIKPQN+LLD D ++ DFG AK L + ++ Y APE
Sbjct: 152 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---SRYYRAPELI 206
Query: 342 RKST-ITAKVDVYSFGVLLLEIISCRKSFDIEMG 374
+T T+ +DV+S G +L E++ + F + G
Sbjct: 207 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 240
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 103/214 (48%), Gaps = 26/214 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL-L 230
G GSFG+VY+ + S VA+KK V QD K FKN E+ ++ + H N+VRL
Sbjct: 41 GNGSFGVVYQAKLCD---SGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLRY 92
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLHE 282
F G+ + VY L + ++ + + + +Q+ R L Y+H
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 151
Query: 283 DCSSQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S I H DIKPQN+LLD D ++ DFG AK L + ++ Y APE
Sbjct: 152 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---SRYYRAPELI 206
Query: 342 RKST-ITAKVDVYSFGVLLLEIISCRKSFDIEMG 374
+T T+ +DV+S G +L E++ + F + G
Sbjct: 207 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 240
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 26/208 (12%)
Query: 173 GRGSFGIV---YKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLV 227
G G+ GIV Y V++ VA+KKL R FQ+ K E+V++ +HKN++
Sbjct: 71 GSGAQGIVCAAYDAVLDRN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 124
Query: 228 RLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 281
LL +E Q+ LV E ++ L + ++ + + +Q+ G+ +LH
Sbjct: 125 SLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHLH 181
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 182 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 235
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRKSF 369
VD++S G ++ E++ + F
Sbjct: 236 LGMGYKENVDIWSVGCIMGEMVRHKILF 263
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 108/213 (50%), Gaps = 20/213 (9%)
Query: 161 LEEATDNFKE--EAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVI 218
+E D+F++ E G G+ G+V+K + + V +KL + + + +N+++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK----VSHKPSGLVMARKL--IHLEIKPAIRNQIIRE 54
Query: 219 GQTHHK-NLVRLLGFC----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQI 273
Q H+ N ++GF +G+ + + E ++ G+L L + + ++ +
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 274 ARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK 333
+GL YL E +I+H D+KP NIL++ ++ DFG++ L ++ + GT+
Sbjct: 114 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVGTR 167
Query: 334 GYVAPEWYRKSTITAKVDVYSFGVLLLEIISCR 366
Y++PE + + + + D++S G+ L+E+ R
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 103/214 (48%), Gaps = 26/214 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL-L 230
G GSFG+VY+ + S VA+KK V QD K FKN E+ ++ + H N+VRL
Sbjct: 30 GNGSFGVVYQAKLCD---SGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLRY 81
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLHE 282
F G+ + VY L + ++ + + + +Q+ R L Y+H
Sbjct: 82 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 140
Query: 283 DCSSQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S I H DIKPQN+LLD D ++ DFG AK L + ++ Y APE
Sbjct: 141 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---SRYYRAPELI 195
Query: 342 RKST-ITAKVDVYSFGVLLLEIISCRKSFDIEMG 374
+T T+ +DV+S G +L E++ + F + G
Sbjct: 196 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 229
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 26/208 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTA--VAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLV 227
G+G+F V + R T VAVK +D+ + +K F+ EV ++ +H N+V
Sbjct: 16 GKGNFAKV-----KLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIV 69
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSW--NLRTNIAF-QIARGLLYLHEDC 284
+L + + LV E+ + G + +L + W F QI + Y H+
Sbjct: 70 KLFEVIETEKTLYLVMEYASGGEVFDYLVAH---GWMKEKEARAKFRQIVSAVQYCHQKF 126
Query: 285 SSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTL-NQSKTIKTAIRGTKGYVAPEWYR- 342
I+H D+K +N+LLD N +I+DFG + T N+ T G+ Y APE ++
Sbjct: 127 ---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC----GSPPYAAPELFQG 179
Query: 343 KSTITAKVDVYSFGVLLLEIISCRKSFD 370
K +VDV+S GV+L ++S FD
Sbjct: 180 KKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 103/214 (48%), Gaps = 26/214 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL-L 230
G GSFG+VY+ + S VA+KK V QD K FKN E+ ++ + H N+VRL
Sbjct: 29 GNGSFGVVYQAKLCD---SGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLRY 80
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLHE 282
F G+ + VY L + ++ + + + +Q+ R L Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 139
Query: 283 DCSSQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S I H DIKPQN+LLD D ++ DFG AK L + ++ Y APE
Sbjct: 140 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---SRYYRAPELI 194
Query: 342 RKST-ITAKVDVYSFGVLLLEIISCRKSFDIEMG 374
+T T+ +DV+S G +L E++ + F + G
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 104/214 (48%), Gaps = 26/214 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL-L 230
G GSFG+VY+ + S VA+KK V QD K FKN E+ ++ + H N+VRL
Sbjct: 57 GNGSFGVVYQAKLCD---SGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLRY 108
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLHE 282
F G+ + VY L + ++ + + + +Q+ R L Y+H
Sbjct: 109 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 167
Query: 283 DCSSQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S I H DIKPQN+LLD D ++ DFG AK L + + ++ Y APE
Sbjct: 168 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRYYRAPELI 222
Query: 342 RKST-ITAKVDVYSFGVLLLEIISCRKSFDIEMG 374
+T T+ +DV+S G +L E++ + F + G
Sbjct: 223 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 256
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 15/106 (14%)
Query: 271 FQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIR 330
+QI RGL Y+H S+ ++H D+KP N+LL+ + +I DFGLA++ + T
Sbjct: 131 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHT-----G 182
Query: 331 GTKGYVAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
YVA WYR I T +D++S G +L E++S R F
Sbjct: 183 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 15/213 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDR--VFQDGEKEF-KNEVVVIGQTHHKNLVRL 229
G GSF V V+ ++ A+K L++ + ++ + + E V+ + H V+L
Sbjct: 38 GEGSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+ + + NG L ++ G+ + R A +I L YLH
Sbjct: 95 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-RFYTA-EIVSALEYLH---GKG 149
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
IIH D+KP+NILL++ + +I+DFG AK+L+ + GT YV+PE + +
Sbjct: 150 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 209
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 380
D+++ G ++ ++++ F G EY I
Sbjct: 210 KSSDLWALGCIIYQLVAGLPPF--RAGNEYLIF 240
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 104/214 (48%), Gaps = 26/214 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL-L 230
G GSFG+VY+ + S VA+KK V QD K FKN E+ ++ + H N+VRL
Sbjct: 63 GNGSFGVVYQAKLCD---SGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLRY 114
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLHE 282
F G+ + VY L + ++ + + + +Q+ R L Y+H
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 173
Query: 283 DCSSQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEW- 340
S I H DIKPQN+LLD D ++ DFG AK L + + ++ Y APE
Sbjct: 174 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRYYRAPELI 228
Query: 341 YRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMG 374
+ + T+ +DV+S G +L E++ + F + G
Sbjct: 229 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 262
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 103/214 (48%), Gaps = 26/214 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL-L 230
G GSFG+VY+ + S VA+KK V QD K FKN E+ ++ + H N+VRL
Sbjct: 29 GNGSFGVVYQAKLCD---SGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLRY 80
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLHE 282
F G+ + VY L + ++ + + + +Q+ R L Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 139
Query: 283 DCSSQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S I H DIKPQN+LLD D ++ DFG AK L + ++ Y APE
Sbjct: 140 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---SRYYRAPELI 194
Query: 342 RKST-ITAKVDVYSFGVLLLEIISCRKSFDIEMG 374
+T T+ +DV+S G +L E++ + F + G
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 15/213 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDR--VFQDGEKEF-KNEVVVIGQTHHKNLVRL 229
G GSF V V+ ++ A+K L++ + ++ + + E V+ + H V+L
Sbjct: 23 GEGSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 79
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+ + + NG L ++ G+ + R A +I L YLH
Sbjct: 80 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-RFYTA-EIVSALEYLH---GKG 134
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
IIH D+KP+NILL++ + +I+DFG AK+L+ + GT YV+PE + +
Sbjct: 135 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 194
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 380
D+++ G ++ ++++ F G EY I
Sbjct: 195 KSSDLWALGCIIYQLVAGLPPF--RAGNEYLIF 225
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 24/216 (11%)
Query: 169 KEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEV--VVIGQTH---- 222
K+ GRG +V + V R + AVK ++ + E EV +TH
Sbjct: 99 KDVIGRGVSSVVRRCV---HRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 223 ---HKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLY 279
H +++ L+ + LV++ + G L +L + S +I + + +
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSF 215
Query: 280 LHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPE 339
LH ++ I+H D+KP+NILLDD+ R+SDFG + L + ++ + GT GY+APE
Sbjct: 216 LH---ANNIVHRDLKPENILLDDNMQIRLSDFGFS--CHLEPGEKLRE-LCGTPGYLAPE 269
Query: 340 WYRKST------ITAKVDVYSFGVLLLEIISCRKSF 369
+ S +VD+++ GV+L +++ F
Sbjct: 270 ILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 22/208 (10%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRLLG 231
G G++G+V + VA+KK+ Q + E+ ++ + H+N++ +
Sbjct: 36 GEGAYGMVCSAYDNLNKVR---VAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGIND 92
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI---AFQIARGLLYLHEDCSSQI 288
+ ++ + + L+ LK +I +QI RGL Y+H S+ +
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANV 149
Query: 289 IHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTI-- 346
+H D+KP N+LL+ + +I DFGLA++ + T YVA WYR I
Sbjct: 150 LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT-----GFLTEYVATRWYRAPEIML 204
Query: 347 -----TAKVDVYSFGVLLLEIISCRKSF 369
T +D++S G +L E++S R F
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 108/213 (50%), Gaps = 20/213 (9%)
Query: 161 LEEATDNFKE--EAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVI 218
+E D+F++ E G G+ G+V+K + + V +KL + + + +N+++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK----VSHKPSGLVMARKL--IHLEIKPAIRNQIIRE 54
Query: 219 GQTHHK-NLVRLLGFC----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQI 273
Q H+ N ++GF +G+ + + E ++ G+L L + + ++ +
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 274 ARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTK 333
+GL YL E +I+H D+KP NIL++ ++ DFG++ L ++ + GT+
Sbjct: 114 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVGTR 167
Query: 334 GYVAPEWYRKSTITAKVDVYSFGVLLLEIISCR 366
Y++PE + + + + D++S G+ L+E+ R
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 103/214 (48%), Gaps = 26/214 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL-L 230
G GSFG+VY+ + S VA+KK V QD K FKN E+ ++ + H N+VRL
Sbjct: 65 GNGSFGVVYQAKLCD---SGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLRY 116
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLHE 282
F G+ + VY L + ++ + + + +Q+ R L Y+H
Sbjct: 117 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 175
Query: 283 DCSSQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEW- 340
S I H DIKPQN+LLD D ++ DFG AK L + ++ Y APE
Sbjct: 176 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---SRYYRAPELI 230
Query: 341 YRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMG 374
+ + T+ +DV+S G +L E++ + F + G
Sbjct: 231 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 264
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 229
E+ G G++G+VYK + T A+ +L++ + E+ ++ + H N+V+L
Sbjct: 8 EKIGEGTYGVVYKA--QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 230 LGFCDEGQNRLLVYEFLNNG--TLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+ +LV+E L+ L G L+ + Q+ G+ Y H+ +
Sbjct: 66 YDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV--TAKSFLLQLLNGIAYCHD---RR 120
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTI- 346
++H D+KPQN+L++ +I+DFGLA+ + +R V WYR +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGI--------PVRKYTHEVVTLWYRAPDVL 172
Query: 347 ------TAKVDVYSFGVLLLEIISCRKSF 369
+ +D++S G + E+++ F
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNGAPLF 201
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 229
E+ G G++G+VYK + T A+ +L++ + E+ ++ + H N+V+L
Sbjct: 8 EKIGEGTYGVVYKA--QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 230 LGFCDEGQNRLLVYEFLNNG--TLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+ +LV+E L+ L G L+ + Q+ G+ Y H+ +
Sbjct: 66 YDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV--TAKSFLLQLLNGIAYCHD---RR 120
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTI- 346
++H D+KPQN+L++ +I+DFGLA+ + +R V WYR +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGI--------PVRKYTHEVVTLWYRAPDVL 172
Query: 347 ------TAKVDVYSFGVLLLEIISCRKSF 369
+ +D++S G + E+++ F
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNGTPLF 201
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 159 KALEEATDNFKE--EAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVV 216
K E D+F+ E G G+ G+V K + + +KL + + + +N+++
Sbjct: 9 KVGELKDDDFERISELGAGNGGVVTK----VQHRPSGLIMARKL--IHLEIKPAIRNQII 62
Query: 217 VIGQTHHK-NLVRLLGFC----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF 271
Q H+ N ++GF +G+ + + E ++ G+L L + + ++
Sbjct: 63 RELQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKEAKRIPEEILGKVSI 121
Query: 272 QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRG 331
+ RGL YL E QI+H D+KP NIL++ ++ DFG++ L ++ + G
Sbjct: 122 AVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVG 175
Query: 332 TKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCR 366
T+ Y+APE + + + + D++S G+ L+E+ R
Sbjct: 176 TRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 103/214 (48%), Gaps = 26/214 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL-L 230
G GSFG+VY+ + S VA+KK V QD K FKN E+ ++ + H N+VRL
Sbjct: 67 GNGSFGVVYQAKLCD---SGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLRY 118
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLHE 282
F G+ + VY L + ++ + + + +Q+ R L Y+H
Sbjct: 119 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 177
Query: 283 DCSSQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEW- 340
S I H DIKPQN+LLD D ++ DFG AK L + ++ Y APE
Sbjct: 178 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---SRYYRAPELI 232
Query: 341 YRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMG 374
+ + T+ +DV+S G +L E++ + F + G
Sbjct: 233 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 266
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 22/208 (10%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRLLG 231
G G++G+V + VA+KK+ Q + E+ ++ + H+N++ +
Sbjct: 52 GEGAYGMVCSAYDNVNKVR---VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 108
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHEDCSSQI 288
+ +L + + L+ LK +I + QI RGL Y+H S+ +
Sbjct: 109 IIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANV 165
Query: 289 IHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTI-- 346
+H D+KP N+LL+ + +I DFGLA++ + T YVA WYR I
Sbjct: 166 LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT-----GFLTEYVATRWYRAPEIML 220
Query: 347 -----TAKVDVYSFGVLLLEIISCRKSF 369
T +D++S G +L E++S R F
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 26/202 (12%)
Query: 173 GRGSFGIV---YKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLV 227
G G+ GIV Y ++E VA+KKL R FQ+ K E+V++ +HKN++
Sbjct: 33 GSGAQGIVCAAYDAILERN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 86
Query: 228 RLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 281
LL +E Q+ +V E ++ L+ + ++ + + +Q+ G+ +LH
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVI--QMELDHERMSYLLYQMLCGIKHLH 143
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 197
Query: 342 RKSTITAKVDVYSFGVLLLEII 363
VD++S G ++ E+I
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMI 219
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 104/214 (48%), Gaps = 26/214 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL-L 230
G GSFG+VY+ + S VA+KK V QD K FKN E+ ++ + H N+VRL
Sbjct: 42 GNGSFGVVYQAKLCD---SGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLRY 93
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLHE 282
F G+ + VY L + ++ + + + +Q+ R L Y+H
Sbjct: 94 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 152
Query: 283 DCSSQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S I H DIKPQN+LLD D ++ DFG AK L + + ++ Y APE
Sbjct: 153 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRYYRAPELI 207
Query: 342 RKST-ITAKVDVYSFGVLLLEIISCRKSFDIEMG 374
+T T+ +DV+S G +L E++ + F + G
Sbjct: 208 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 241
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 26/208 (12%)
Query: 173 GRGSFGIV---YKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLV 227
G G+ GIV Y V++ VA+KKL R FQ+ K E+V++ +HKN++
Sbjct: 34 GSGAQGIVCAAYDAVLDRN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 87
Query: 228 RLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 281
LL +E Q+ LV E ++ L + ++ + + +Q+ G+ +LH
Sbjct: 88 SLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHLH 144
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 145 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 198
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRKSF 369
VD++S G ++ E++ + F
Sbjct: 199 LGMGYKENVDIWSVGCIMGEMVRHKILF 226
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 9/193 (4%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 229
EE G+G+F +V + V A+ + +D +K + E + H N+VRL
Sbjct: 17 EELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQK-LEREARICRLLKHPNIVRL 75
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
E + L+++ + G L + S ++ QI +L+ H+ ++
Sbjct: 76 HDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ---MGVV 132
Query: 290 HCDIKPQNILLDDHYNA---RISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTI 346
H ++KP+N+LL +++DFGLA + Q A GT GY++PE RK
Sbjct: 133 HRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA--GTPGYLSPEVLRKDPY 190
Query: 347 TAKVDVYSFGVLL 359
VD+++ GV+L
Sbjct: 191 GKPVDLWACGVIL 203
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 26/208 (12%)
Query: 173 GRGSFGIV---YKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLV 227
G G+ GIV Y V++ VA+KKL R FQ+ K E+V++ +HKN++
Sbjct: 27 GSGAQGIVCAAYDAVLDRN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 80
Query: 228 RLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 281
LL +E Q+ LV E ++ L + ++ + + +Q+ G+ +LH
Sbjct: 81 SLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHLH 137
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 138 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 191
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRKSF 369
VD++S G ++ E++ + F
Sbjct: 192 LGMGYKENVDIWSVGCIMGEMVRHKILF 219
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 26/208 (12%)
Query: 173 GRGSFGIV---YKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLV 227
G G+ GIV Y V++ VA+KKL R FQ+ K E+V++ +HKN++
Sbjct: 34 GSGAQGIVCAAYDAVLDRN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 87
Query: 228 RLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 281
LL +E Q+ LV E ++ L + ++ + + +Q+ G+ +LH
Sbjct: 88 SLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHLH 144
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 145 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 198
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRKSF 369
VD++S G ++ E++ + F
Sbjct: 199 LGMGYKENVDIWSVGCIMGEMVRHKILF 226
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 26/208 (12%)
Query: 173 GRGSFGIV---YKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLV 227
G G+ GIV Y V++ VA+KKL R FQ+ K E+V++ +HKN++
Sbjct: 26 GSGAQGIVCAAYDAVLDRN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 79
Query: 228 RLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 281
LL +E Q+ LV E ++ L + ++ + + +Q+ G+ +LH
Sbjct: 80 SLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHLH 136
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 137 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 190
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRKSF 369
VD++S G ++ E++ + F
Sbjct: 191 LGMGYKENVDIWSVGCIMGEMVRHKILF 218
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 26/208 (12%)
Query: 173 GRGSFGIV---YKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLV 227
G G+ GIV Y V++ VA+KKL R FQ+ K E+V++ +HKN++
Sbjct: 33 GSGAQGIVCAAYDAVLDRN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 86
Query: 228 RLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 281
LL +E Q+ LV E ++ L + ++ + + +Q+ G+ +LH
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHLH 143
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 197
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRKSF 369
VD++S G ++ E++ + F
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHKILF 225
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 104/214 (48%), Gaps = 26/214 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL-L 230
G GSFG+VY+ + S VA+KK V QD K FKN E+ ++ + H N+VRL
Sbjct: 29 GNGSFGVVYQAKLCD---SGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLRY 80
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLHE 282
F G+ + VY L + ++ + + + +Q+ R L Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 139
Query: 283 DCSSQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S I H DIKPQN+LLD D ++ DFG AK L + + ++ Y APE
Sbjct: 140 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRYYRAPELI 194
Query: 342 RKST-ITAKVDVYSFGVLLLEIISCRKSFDIEMG 374
+T T+ +DV+S G +L E++ + F + G
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 26/208 (12%)
Query: 173 GRGSFGIV---YKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLV 227
G G+ GIV Y V++ VA+KKL R FQ+ K E+V++ +HKN++
Sbjct: 27 GSGAQGIVCAAYDAVLDRN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 80
Query: 228 RLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 281
LL +E Q+ LV E ++ L + ++ + + +Q+ G+ +LH
Sbjct: 81 SLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHLH 137
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 138 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 191
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRKSF 369
VD++S G ++ E++ + F
Sbjct: 192 LGMGYKENVDIWSVGCIMGEMVRHKILF 219
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 26/208 (12%)
Query: 173 GRGSFGIV---YKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLV 227
G G+ GIV Y V++ VA+KKL R FQ+ K E+V++ +HKN++
Sbjct: 33 GSGAQGIVCAAYDAVLDRN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 86
Query: 228 RLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 281
LL +E Q+ LV E ++ L + L + + +Q+ G+ +LH
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMEL--DHERMSYLLYQMLCGIKHLH 143
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 197
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRKSF 369
VD++S G ++ E++ + F
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHKILF 225
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 26/208 (12%)
Query: 173 GRGSFGIV---YKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLV 227
G G+ GIV Y V++ VA+KKL R FQ+ K E+V++ +HKN++
Sbjct: 32 GSGAQGIVCAAYDAVLDRN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 85
Query: 228 RLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 281
LL +E Q+ LV E ++ L + L + + +Q+ G+ +LH
Sbjct: 86 SLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMEL--DHERMSYLLYQMLCGIKHLH 142
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 143 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 196
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRKSF 369
VD++S G ++ E++ + F
Sbjct: 197 LGMGYKENVDIWSVGCIMGEMVRHKILF 224
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 103/214 (48%), Gaps = 26/214 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL-L 230
G GSFG+VY+ + S VA+KK V QD K FKN E+ ++ + H N+VRL
Sbjct: 108 GNGSFGVVYQAKLCD---SGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLRY 159
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLHE 282
F G+ + VY L + ++ + + + +Q+ R L Y+H
Sbjct: 160 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 218
Query: 283 DCSSQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEW- 340
S I H DIKPQN+LLD D ++ DFG AK L + ++ Y APE
Sbjct: 219 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---SRYYRAPELI 273
Query: 341 YRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMG 374
+ + T+ +DV+S G +L E++ + F + G
Sbjct: 274 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 307
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 102/206 (49%), Gaps = 27/206 (13%)
Query: 173 GRGSFGIV---YKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLV 227
G G+ GIV Y ++E VA+KKL R FQ+ K E+V++ +HKN++
Sbjct: 33 GSGAQGIVCAAYDAILERN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 86
Query: 228 RLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 281
LL +E Q+ +V E ++ L + ++ + + +Q+ G+ +LH
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHLH 143
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S+ IIH D+KP NI++ +I DFGLA+ T S ++ + T+ Y APE
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEV-VTRYYRAPEVI 197
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRK 367
VD++S G ++ E++ C K
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMV-CHK 222
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 104/214 (48%), Gaps = 26/214 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL-L 230
G GSFG+VY+ + S VA+KK V QD K FKN E+ ++ + H N+VRL
Sbjct: 34 GNGSFGVVYQAKLCD---SGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLRY 85
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLHE 282
F G+ + VY L + ++ + + + +Q+ R L Y+H
Sbjct: 86 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 144
Query: 283 DCSSQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S I H DIKPQN+LLD D ++ DFG AK L + + ++ Y APE
Sbjct: 145 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRYYRAPELI 199
Query: 342 RKST-ITAKVDVYSFGVLLLEIISCRKSFDIEMG 374
+T T+ +DV+S G +L E++ + F + G
Sbjct: 200 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 233
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 70/132 (53%), Gaps = 8/132 (6%)
Query: 241 LVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNI 298
+V E+++ TL + G + P + + + L + H++ IIH D+KP NI
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAI--EVIADACQALNFSHQNG---IIHRDVKPANI 147
Query: 299 LLDDHYNARISDFGLAKLLTLNQSKTIKTA-IRGTKGYVAPEWYRKSTITAKVDVYSFGV 357
L+ ++ DFG+A+ + + + +TA + GT Y++PE R ++ A+ DVYS G
Sbjct: 148 LISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 207
Query: 358 LLLEIISCRKSF 369
+L E+++ F
Sbjct: 208 VLYEVLTGEPPF 219
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 107/234 (45%), Gaps = 28/234 (11%)
Query: 153 LRCFSYKALEEATDNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQ--DGE 208
L+ S+ + D ++ E G G++G+V R + VA+KK+ F
Sbjct: 42 LKARSFDVTFDVGDEYEIIETIGNGAYGVVSSA---RRRLTGQQVAIKKIPNAFDVVTNA 98
Query: 209 KEFKNEVVVIGQTHHKNLVRLLGFCD------EGQNRLLVYEFLNNGTLASFLFGNLKPS 262
K E+ ++ H N++ + E ++ +V + + + L + + +
Sbjct: 99 KRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLT 157
Query: 263 WNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQS 322
+Q+ RGL Y+H S+Q+IH D+KP N+L++++ +I DFG+A+ L + +
Sbjct: 158 LEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPA 214
Query: 323 KTIKTAIRGTKGYVAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
+ YVA WYR + T +D++S G + E+++ R+ F
Sbjct: 215 EHQYFMTE----YVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLF 264
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 15/106 (14%)
Query: 271 FQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIR 330
+QI RGL Y+H S+ ++H D+KP N+LL+ + +I DFGLA++ + T
Sbjct: 135 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT-----G 186
Query: 331 GTKGYVAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
YVA WYR I T +D++S G +L E++S R F
Sbjct: 187 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 15/106 (14%)
Query: 271 FQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIR 330
+QI RGL Y+H S+ ++H D+KP N+LL+ + +I DFGLA++ + T
Sbjct: 131 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT-----G 182
Query: 331 GTKGYVAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
YVA WYR I T +D++S G +L E++S R F
Sbjct: 183 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 15/106 (14%)
Query: 271 FQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIR 330
+QI RGL Y+H S+ ++H D+KP N+LL+ + +I DFGLA++ + T
Sbjct: 131 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT-----G 182
Query: 331 GTKGYVAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
YVA WYR I T +D++S G +L E++S R F
Sbjct: 183 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 229
E+ G G++G+VYK + T A+ +L++ + E+ ++ + H N+V+L
Sbjct: 8 EKIGEGTYGVVYKA--QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 230 LGFCDEGQNRLLVYEFLNNG--TLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+ +LV+E L+ L G L+ + Q+ G+ Y H+ +
Sbjct: 66 YDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV--TAKSFLLQLLNGIAYCHD---RR 120
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTI- 346
++H D+KPQN+L++ +I+DFGLA+ + +R + WYR +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGI--------PVRKYTHEIVTLWYRAPDVL 172
Query: 347 ------TAKVDVYSFGVLLLEIISCRKSF 369
+ +D++S G + E+++ F
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNGTPLF 201
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 107/242 (44%), Gaps = 15/242 (6%)
Query: 144 PGDGTVETNLRCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDR- 202
PG G+++ + F + G GSF V+ ++ A+K L++
Sbjct: 10 PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTT---VLARELATSREYAIKILEKR 66
Query: 203 -VFQDGEKEF-KNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGN 258
+ ++ + + E V+ + H V+L + + + NG L ++ G+
Sbjct: 67 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 126
Query: 259 LKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLT 318
+ R A +I L YLH IIH D+KP+NILL++ + +I+DFG AK+L+
Sbjct: 127 FDETCT-RFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 181
Query: 319 LNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYA 378
+ GT YV+PE + + D+++ G ++ ++++ F G EY
Sbjct: 182 PESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYL 239
Query: 379 IL 380
I
Sbjct: 240 IF 241
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 8/132 (6%)
Query: 241 LVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNI 298
+V E+++ TL + G + P + + + L + H++ IIH D+KP NI
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAI--EVIADACQALNFSHQNG---IIHRDVKPANI 147
Query: 299 LLDDHYNARISDFGLAKLLTLNQSKTIKTA-IRGTKGYVAPEWYRKSTITAKVDVYSFGV 357
++ ++ DFG+A+ + + + +TA + GT Y++PE R ++ A+ DVYS G
Sbjct: 148 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 207
Query: 358 LLLEIISCRKSF 369
+L E+++ F
Sbjct: 208 VLYEVLTGEPPF 219
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 98/202 (48%), Gaps = 26/202 (12%)
Query: 173 GRGSFGIV---YKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLV 227
G G+ GIV Y ++E VA+KKL R FQ+ K E+V++ +HKN++
Sbjct: 33 GSGAQGIVCAAYDAILERN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 86
Query: 228 RLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 281
LL +E Q+ +V E ++ L + ++ + + +Q+ G+ +LH
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHLH 143
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 197
Query: 342 RKSTITAKVDVYSFGVLLLEII 363
VD++S G ++ E+I
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMI 219
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 15/106 (14%)
Query: 271 FQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIR 330
+QI RGL Y+H S+ ++H D+KP N+LL+ + +I DFGLA++ + T
Sbjct: 133 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHT-----G 184
Query: 331 GTKGYVAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
YVA WYR I T +D++S G +L E++S R F
Sbjct: 185 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 115/240 (47%), Gaps = 24/240 (10%)
Query: 159 KALEEATDNFKE--EAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVV 216
K E D+F++ E G G+ G+V+K + + V +KL + + + +N+++
Sbjct: 61 KVGELKDDDFEKISELGAGNGGVVFK----VSHKPSGLVMARKL--IHLEIKPAIRNQII 114
Query: 217 VIGQTHHK-NLVRLLGFC----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF 271
Q H+ N ++GF +G+ + + E ++ G+L L + + ++
Sbjct: 115 RELQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGKVSI 173
Query: 272 QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRG 331
+ +GL YL E +I+H D+KP NIL++ ++ DFG++ L ++ + G
Sbjct: 174 AVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVG 227
Query: 332 TKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNG 391
T+ Y++PE + + + + D++S G+ L+E+ R +E ++ F C G
Sbjct: 228 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM----FGCQVEG 283
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 122/284 (42%), Gaps = 32/284 (11%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVK--KLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 230
G+G FG V + ++ S VAVK K D + +EF E + + H ++ +L+
Sbjct: 32 GKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLV 91
Query: 231 GFCDEGQNR------LLVYEFLNNGTLASFLF----GNLKPSWNLRTNIAFQ--IARGLL 278
G + + +++ F+ +G L +FL G + L+T + F IA G+
Sbjct: 92 GVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGME 151
Query: 279 YLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAP 338
YL S IH D+ +N +L + ++DFGL++ + A + ++A
Sbjct: 152 YL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLAL 208
Query: 339 EWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVE 398
E + T DV++FGV + EI++ ++ + N ++ + +
Sbjct: 209 ESLADNLYTVHSDVWAFGVTMWEIMTRGQT---------------PYAGIENAEIYNYLI 253
Query: 399 GDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVV 442
G +C+E++ + C DP RP+ + LE ++
Sbjct: 254 GGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENIL 297
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 98/202 (48%), Gaps = 26/202 (12%)
Query: 173 GRGSFGIV---YKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLV 227
G G+ GIV Y ++E VA+KKL R FQ+ K E+V++ +HKN++
Sbjct: 34 GSGAQGIVCAAYDAILERN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 87
Query: 228 RLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 281
LL +E Q+ +V E ++ L + ++ + + +Q+ G+ +LH
Sbjct: 88 GLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHLH 144
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 145 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 198
Query: 342 RKSTITAKVDVYSFGVLLLEII 363
VD++S G ++ E+I
Sbjct: 199 LGMGYKENVDIWSVGCIMGEMI 220
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 14/198 (7%)
Query: 171 EAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 230
E G G+FG VYK + ++ A K +D ++ +++ E+ ++ H N+V+LL
Sbjct: 44 ELGDGAFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA-FQIARGLLYLHEDCSSQII 289
N ++ EF G + + + +P + + Q L YLH++ +II
Sbjct: 101 DAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KII 157
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY-----RKS 344
H D+K NIL + +++DFG++ T + + + GT ++APE +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQR--RDSFIGTPYWMAPEVVMCETSKDR 215
Query: 345 TITAKVDVYSFGVLLLEI 362
K DV+S G+ L+E+
Sbjct: 216 PYDYKADVWSLGITLIEM 233
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 98/202 (48%), Gaps = 26/202 (12%)
Query: 173 GRGSFGIV---YKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLV 227
G G+ GIV Y ++E VA+KKL R FQ+ K E+V++ +HKN++
Sbjct: 33 GSGAQGIVCAAYDAILERN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 86
Query: 228 RLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 281
LL +E Q+ +V E ++ L + ++ + + +Q+ G+ +LH
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHLH 143
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S+ IIH D+KP NI++ +I DFGLA+ + T + T+ Y APE
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVV---TRYYRAPEVI 197
Query: 342 RKSTITAKVDVYSFGVLLLEII 363
VD++S G ++ E+I
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMI 219
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 8/132 (6%)
Query: 241 LVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNI 298
+V E+++ TL + G + P + + + L + H++ IIH D+KP NI
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAI--EVIADACQALNFSHQNG---IIHRDVKPANI 147
Query: 299 LLDDHYNARISDFGLAKLLTLNQSKTIKTA-IRGTKGYVAPEWYRKSTITAKVDVYSFGV 357
++ ++ DFG+A+ + + + +TA + GT Y++PE R ++ A+ DVYS G
Sbjct: 148 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 207
Query: 358 LLLEIISCRKSF 369
+L E+++ F
Sbjct: 208 VLYEVLTGEPPF 219
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 98/202 (48%), Gaps = 26/202 (12%)
Query: 173 GRGSFGIV---YKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLV 227
G G+ GIV Y ++E VA+KKL R FQ+ K E+V++ +HKN++
Sbjct: 33 GSGAQGIVCAAYDAILERN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 86
Query: 228 RLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 281
LL +E Q+ +V E ++ L + ++ + + +Q+ G+ +LH
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHLH 143
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 197
Query: 342 RKSTITAKVDVYSFGVLLLEII 363
VD++S G ++ E+I
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMI 219
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 108/215 (50%), Gaps = 20/215 (9%)
Query: 159 KALEEATDNFKE--EAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVV 216
K E D+F++ E G G+ G+V+K + + V +KL + + + +N+++
Sbjct: 26 KVGELKDDDFEKISELGAGNGGVVFK----VSHKPSGLVMARKL--IHLEIKPAIRNQII 79
Query: 217 VIGQTHHK-NLVRLLGFC----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF 271
Q H+ N ++GF +G+ + + E ++ G+L L + + ++
Sbjct: 80 RELQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGKVSI 138
Query: 272 QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRG 331
+ +GL YL E +I+H D+KP NIL++ ++ DFG++ L ++ + G
Sbjct: 139 AVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVG 192
Query: 332 TKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCR 366
T+ Y++PE + + + + D++S G+ L+E+ R
Sbjct: 193 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 8/132 (6%)
Query: 241 LVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNI 298
+V E+++ TL + G + P + + + L + H++ IIH D+KP NI
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAI--EVIADACQALNFSHQNG---IIHRDVKPANI 147
Query: 299 LLDDHYNARISDFGLAKLLTLNQSKTIKTA-IRGTKGYVAPEWYRKSTITAKVDVYSFGV 357
++ ++ DFG+A+ + + + +TA + GT Y++PE R ++ A+ DVYS G
Sbjct: 148 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 207
Query: 358 LLLEIISCRKSF 369
+L E+++ F
Sbjct: 208 VLYEVLTGEPPF 219
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 27/206 (13%)
Query: 173 GRGSFGIV---YKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLV 227
G G+ GIV Y ++E VA+KKL R FQ+ K E+V++ +HKN++
Sbjct: 27 GSGAQGIVCAAYDAILERN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 80
Query: 228 RLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 281
LL +E Q+ +V E ++ L + ++ + + +Q+ G+ +LH
Sbjct: 81 GLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHLH 137
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 138 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 191
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRK 367
VD++S G ++ E++ C K
Sbjct: 192 LGMGYKENVDLWSVGCIMGEMV-CHK 216
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 8/132 (6%)
Query: 241 LVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNI 298
+V E+++ TL + G + P + + + L + H++ IIH D+KP NI
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAI--EVIADACQALNFSHQNG---IIHRDVKPANI 147
Query: 299 LLDDHYNARISDFGLAKLLTLNQSKTIKTA-IRGTKGYVAPEWYRKSTITAKVDVYSFGV 357
++ ++ DFG+A+ + + + +TA + GT Y++PE R ++ A+ DVYS G
Sbjct: 148 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 207
Query: 358 LLLEIISCRKSF 369
+L E+++ F
Sbjct: 208 VLYEVLTGEPPF 219
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 102/206 (49%), Gaps = 27/206 (13%)
Query: 173 GRGSFGIV---YKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLV 227
G G+ GIV Y ++E VA+KKL R FQ+ K E+V++ +HKN++
Sbjct: 33 GSGAQGIVCAAYDAILERN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 86
Query: 228 RLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 281
LL +E Q+ +V E ++ L + ++ + + +Q+ G+ +LH
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHLH 143
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S+ IIH D+KP NI++ +I DFGLA+ T S ++ + T+ Y APE
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEV-VTRYYRAPEVI 197
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRK 367
VD++S G ++ E++ C K
Sbjct: 198 LGMGYKENVDLWSVGCIMGEMV-CHK 222
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 27/206 (13%)
Query: 173 GRGSFGIV---YKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLV 227
G G+ GIV Y ++E VA+KKL R FQ+ K E+V++ +HKN++
Sbjct: 38 GSGAQGIVCAAYDAILERN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 91
Query: 228 RLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 281
LL +E Q+ +V E ++ L + ++ + + +Q+ G+ +LH
Sbjct: 92 GLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHLH 148
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 149 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 202
Query: 342 RKSTITAKVDVYSFGVLLLEIISCRK 367
VD++S G ++ E++ C K
Sbjct: 203 LGMGYKENVDLWSVGCIMGEMV-CHK 227
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 8/132 (6%)
Query: 241 LVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNI 298
+V E+++ TL + G + P + + + L + H++ IIH D+KP NI
Sbjct: 110 IVMEYVDGVTLRDIVHTEGPMTPKRAI--EVIADACQALNFSHQNG---IIHRDVKPANI 164
Query: 299 LLDDHYNARISDFGLAKLLTLNQSKTIKTA-IRGTKGYVAPEWYRKSTITAKVDVYSFGV 357
++ ++ DFG+A+ + + + +TA + GT Y++PE R ++ A+ DVYS G
Sbjct: 165 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 224
Query: 358 LLLEIISCRKSF 369
+L E+++ F
Sbjct: 225 VLYEVLTGEPPF 236
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 9/130 (6%)
Query: 244 EFLNNGTLASFLFGNLKPSWN--LRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLD 301
EF + GTL ++ + L + QI +G+ Y+H S ++IH D+KP NI L
Sbjct: 114 EFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLV 170
Query: 302 DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLE 361
D +I DFGL L N K +T +GT Y++PE +VD+Y+ G++L E
Sbjct: 171 DTKQVKIGDFGLVTSLK-NDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAE 227
Query: 362 IIS-CRKSFD 370
++ C +F+
Sbjct: 228 LLHVCDTAFE 237
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 104/231 (45%), Gaps = 13/231 (5%)
Query: 144 PGDGTVETNLRCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDR- 202
PG G+++ + F + G GSF V V+ ++ A+K L++
Sbjct: 12 PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTV---VLARELATSREYAIKILEKR 68
Query: 203 -VFQDGEKEF-KNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGN 258
+ ++ + + E V+ + H V+L + + + NG L ++ G+
Sbjct: 69 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 128
Query: 259 LKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLT 318
+ R A +I L YLH IIH D+KP+NILL++ + +I+DFG AK+L+
Sbjct: 129 FDETCT-RFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 183
Query: 319 LNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSF 369
+ GT YV+PE + + D+++ G ++ ++++ F
Sbjct: 184 PESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPF 234
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 107/234 (45%), Gaps = 28/234 (11%)
Query: 153 LRCFSYKALEEATDNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQ--DGE 208
L+ S+ + D ++ E G G++G+V R + VA+KK+ F
Sbjct: 41 LKARSFDVTFDVGDEYEIIETIGNGAYGVVSSA---RRRLTGQQVAIKKIPNAFDVVTNA 97
Query: 209 KEFKNEVVVIGQTHHKNLVRLLGFCD------EGQNRLLVYEFLNNGTLASFLFGNLKPS 262
K E+ ++ H N++ + E ++ +V + + + L + + +
Sbjct: 98 KRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESD-LHQIIHSSQPLT 156
Query: 263 WNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQS 322
+Q+ RGL Y+H S+Q+IH D+KP N+L++++ +I DFG+A+ L + +
Sbjct: 157 LEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPA 213
Query: 323 KTIKTAIRGTKGYVAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
+ YVA WYR + T +D++S G + E+++ R+ F
Sbjct: 214 EHQYFMTE----YVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLF 263
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 15/106 (14%)
Query: 271 FQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIR 330
+QI RGL Y+H S+ ++H D+KP N+LL+ + +I DFGLA++ + T
Sbjct: 135 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT-----G 186
Query: 331 GTKGYVAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
YVA WYR I T +D++S G +L E++S R F
Sbjct: 187 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 15/106 (14%)
Query: 271 FQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIR 330
+QI RGL Y+H S+ ++H D+KP N+LL+ + +I DFGLA++ + T
Sbjct: 131 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT-----G 182
Query: 331 GTKGYVAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
YVA WYR I T +D++S G +L E++S R F
Sbjct: 183 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 15/106 (14%)
Query: 271 FQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIR 330
+QI RGL Y+H S+ ++H D+KP N+LL+ + +I DFGLA++ + T
Sbjct: 139 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT-----G 190
Query: 331 GTKGYVAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
YVA WYR I T +D++S G +L E++S R F
Sbjct: 191 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 236
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 15/106 (14%)
Query: 271 FQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIR 330
+QI RGL Y+H S+ ++H D+KP N+LL+ + +I DFGLA++ + T
Sbjct: 131 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT-----G 182
Query: 331 GTKGYVAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
YVA WYR I T +D++S G +L E++S R F
Sbjct: 183 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 15/106 (14%)
Query: 271 FQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIR 330
+QI RGL Y+H S+ ++H D+KP N+LL+ + +I DFGLA++ + T
Sbjct: 133 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT-----G 184
Query: 331 GTKGYVAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
YVA WYR I T +D++S G +L E++S R F
Sbjct: 185 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 15/106 (14%)
Query: 271 FQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIR 330
+QI RGL Y+H S+ ++H D+KP N+LL+ + +I DFGLA++ + T
Sbjct: 133 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT-----G 184
Query: 331 GTKGYVAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
YVA WYR I T +D++S G +L E++S R F
Sbjct: 185 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 15/106 (14%)
Query: 271 FQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIR 330
+QI RGL Y+H S+ ++H D+KP N+LL+ + +I DFGLA++ + T
Sbjct: 129 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT-----G 180
Query: 331 GTKGYVAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
YVA WYR I T +D++S G +L E++S R F
Sbjct: 181 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 226
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 15/106 (14%)
Query: 271 FQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIR 330
+QI RGL Y+H S+ ++H D+KP N+LL+ + +I DFGLA++ + T
Sbjct: 151 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT-----G 202
Query: 331 GTKGYVAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
YVA WYR I T +D++S G +L E++S R F
Sbjct: 203 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 15/106 (14%)
Query: 271 FQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIR 330
+QI RGL Y+H S+ ++H D+KP N+LL+ + +I DFGLA++ + T
Sbjct: 129 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT-----G 180
Query: 331 GTKGYVAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
YVA WYR I T +D++S G +L E++S R F
Sbjct: 181 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 226
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 15/106 (14%)
Query: 271 FQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIR 330
+QI RGL Y+H S+ ++H D+KP N+LL+ + +I DFGLA++ + T
Sbjct: 136 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT-----G 187
Query: 331 GTKGYVAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
YVA WYR I T +D++S G +L E++S R F
Sbjct: 188 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 233
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 15/106 (14%)
Query: 271 FQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIR 330
+QI RGL Y+H S+ ++H D+KP N+LL+ + +I DFGLA++ + T
Sbjct: 137 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT-----G 188
Query: 331 GTKGYVAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
YVA WYR I T +D++S G +L E++S R F
Sbjct: 189 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 234
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 15/106 (14%)
Query: 271 FQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIR 330
+QI RGL Y+H S+ ++H D+KP N+LL+ + +I DFGLA++ + T
Sbjct: 128 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT-----G 179
Query: 331 GTKGYVAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
YVA WYR I T +D++S G +L E++S R F
Sbjct: 180 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 225
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 15/106 (14%)
Query: 271 FQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIR 330
+QI RGL Y+H S+ ++H D+KP N+LL+ + +I DFGLA++ + T
Sbjct: 135 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT-----G 186
Query: 331 GTKGYVAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
YVA WYR I T +D++S G +L E++S R F
Sbjct: 187 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 15/106 (14%)
Query: 271 FQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIR 330
+QI RGL Y+H S+ ++H D+KP N+LL+ + +I DFGLA++ + T
Sbjct: 135 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT-----G 186
Query: 331 GTKGYVAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
YVA WYR I T +D++S G +L E++S R F
Sbjct: 187 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 21/179 (11%)
Query: 270 AFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAI 329
+FQ+A+G+ +L S + IH D+ +NILL + +I DFGLA+ + + K
Sbjct: 197 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 253
Query: 330 RGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDC 387
R ++APE T + DV+SFGVLL EI S S +++ EE+ C
Sbjct: 254 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------C 304
Query: 388 YRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEVDV 446
R L EG D E + + C +PS RPT ++ + L +++ +
Sbjct: 305 RR------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 356
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 173 GRGSFGIVYK----GVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVR 228
GRG+FG V + G+ +T T AV + K + ++I HH N+V
Sbjct: 29 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 88
Query: 229 LLGFCDE-GQNRLLVYEFLNNGTLASFL 255
LLG C + G +++ EF G L+++L
Sbjct: 89 LLGACTKPGGPLMVIVEFCKFGNLSTYL 116
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 93/198 (46%), Gaps = 14/198 (7%)
Query: 171 EAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 230
E G G+FG VYK + ++ A K +D ++ +++ E+ ++ H N+V+LL
Sbjct: 44 ELGDGAFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA-FQIARGLLYLHEDCSSQII 289
N ++ EF G + + + +P + + Q L YLH++ +II
Sbjct: 101 DAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KII 157
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY-----RKS 344
H D+K NIL + +++DFG++ T + + GT ++APE +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQR--RDXFIGTPYWMAPEVVMCETSKDR 215
Query: 345 TITAKVDVYSFGVLLLEI 362
K DV+S G+ L+E+
Sbjct: 216 PYDYKADVWSLGITLIEM 233
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 104/231 (45%), Gaps = 13/231 (5%)
Query: 144 PGDGTVETNLRCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDR- 202
PG G+++ + F + G GSF V V+ ++ A+K L++
Sbjct: 12 PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTV---VLARELATSREYAIKILEKR 68
Query: 203 -VFQDGEKEF-KNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGN 258
+ ++ + + E V+ + H V+L + + + NG L ++ G+
Sbjct: 69 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 128
Query: 259 LKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLT 318
+ R A +I L YLH IIH D+KP+NILL++ + +I+DFG AK+L+
Sbjct: 129 FDETCT-RFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 183
Query: 319 LNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSF 369
+ GT YV+PE + + D+++ G ++ ++++ F
Sbjct: 184 PESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 21/179 (11%)
Query: 270 AFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAI 329
+FQ+A+G+ +L S + IH D+ +NILL + +I DFGLA+ + + K
Sbjct: 199 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 255
Query: 330 RGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDC 387
R ++APE T + DV+SFGVLL EI S S +++ EE+ C
Sbjct: 256 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------C 306
Query: 388 YRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEVDV 446
R L EG D E + + C +PS RPT ++ + L +++ +
Sbjct: 307 RR------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 358
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 173 GRGSFGIVYK----GVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVR 228
GRG+FG V + G+ +T T AV + K + ++I HH N+V
Sbjct: 31 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 90
Query: 229 LLGFCDE-GQNRLLVYEFLNNGTLASFL 255
LLG C + G +++ EF G L+++L
Sbjct: 91 LLGACTKPGGPLMVIVEFCKFGNLSTYL 118
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 112/230 (48%), Gaps = 30/230 (13%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTA--VAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 227
E+ GRG FGIV++ V +++ + A V VK D+V K E+ ++ H+N++
Sbjct: 11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVL------VKKEISILNIARHRNIL 64
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPS---WNLRTNIAF--QIARGLLYLHE 282
L + + ++++EF++ +F + S N R +++ Q+ L +LH
Sbjct: 65 HLHESFESMEELVMIFEFISGLD----IFERINTSAFELNEREIVSYVHQVCEALQFLH- 119
Query: 283 DCSSQIIHCDIKPQNILLDDHYNA--RISDFGLAKLLTLNQS-KTIKTAIRGTKGYVAPE 339
S I H DI+P+NI+ ++ +I +FG A+ L + + + TA Y APE
Sbjct: 120 --SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTA----PEYYAPE 173
Query: 340 WYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGE---EYAILTDWAFD 386
++ ++ D++S G L+ ++S F E + E + ++ FD
Sbjct: 174 VHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFD 223
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 21/179 (11%)
Query: 270 AFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAI 329
+FQ+A+G+ +L S + IH D+ +NILL + +I DFGLA+ + + K
Sbjct: 204 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 260
Query: 330 RGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDC 387
R ++APE T + DV+SFGVLL EI S S +++ EE+ C
Sbjct: 261 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------C 311
Query: 388 YRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEVDV 446
R L EG D E + + C +PS RPT ++ + L +++ +
Sbjct: 312 RR------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 363
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 173 GRGSFGIVYK----GVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVR 228
GRG+FG V + G+ +T T AV + K + ++I HH N+V
Sbjct: 36 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 95
Query: 229 LLGFCDE-GQNRLLVYEFLNNGTLASFL 255
LLG C + G +++ EF G L+++L
Sbjct: 96 LLGACTKPGGPLMVIVEFCKFGNLSTYL 123
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 108/215 (50%), Gaps = 20/215 (9%)
Query: 159 KALEEATDNFKE--EAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVV 216
K E D+F++ E G G+ G+V+K + + V +KL + + + +N+++
Sbjct: 18 KVGELKDDDFEKISELGAGNGGVVFK----VSHKPSGLVMARKL--IHLEIKPAIRNQII 71
Query: 217 VIGQTHHK-NLVRLLGFC----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF 271
Q H+ N ++GF +G+ + + E ++ G+L L + + ++
Sbjct: 72 RELQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGKVSI 130
Query: 272 QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRG 331
+ +GL YL E +I+H D+KP NIL++ ++ DFG++ L ++ + G
Sbjct: 131 AVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVG 184
Query: 332 TKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCR 366
T+ Y++PE + + + + D++S G+ L+E+ R
Sbjct: 185 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 21/179 (11%)
Query: 270 AFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAI 329
+FQ+A+G+ +L S + IH D+ +NILL + +I DFGLA+ + + K
Sbjct: 206 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 262
Query: 330 RGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDC 387
R ++APE T + DV+SFGVLL EI S S +++ EE+ C
Sbjct: 263 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------C 313
Query: 388 YRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEVDV 446
R L EG D E + + C +PS RPT ++ + L +++ +
Sbjct: 314 RR------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 365
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 173 GRGSFGIVYK----GVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVR 228
GRG+FG V + G+ +T T AV + K + ++I HH N+V
Sbjct: 38 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 97
Query: 229 LLGFCDE-GQNRLLVYEFLNNGTLASFL 255
LLG C + G +++ EF G L+++L
Sbjct: 98 LLGACTKPGGPLMVIVEFCKFGNLSTYL 125
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 21/171 (12%)
Query: 270 AFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAI 329
+FQ+ARG+ +L S + IH D+ +NILL ++ +I DFGLA+ + N K
Sbjct: 205 SFQVARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDT 261
Query: 330 RGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDC 387
R ++APE + K DV+S+GVLL EI S S ++M E++ C
Sbjct: 262 RLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDF---------C 312
Query: 388 YRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQML 438
R L EG M ++ + + C DP RP ++ + L
Sbjct: 313 SR------LREG-MRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 173 GRGSFGIVYKGVIETTRTSTT--AVAVKKLDRVFQDGE-KEFKNEVVVIGQT-HHKNLVR 228
GRG+FG V + + S T VAVK L E K E+ ++ HH N+V
Sbjct: 36 GRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVVN 95
Query: 229 LLGFC-DEGQNRLLVYEFLNNGTLASFL 255
LLG C +G +++ E+ G L+++L
Sbjct: 96 LLGACTKQGGPLMVIVEYCKYGNLSNYL 123
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 11/200 (5%)
Query: 165 TDNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH 222
TD ++ EE G+G+F +V + + T A + +D +K + E +
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQK-LEREARICRLLK 61
Query: 223 HKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHE 282
H N+VRL E LV++ + G L + S ++ QI + + H
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCH- 120
Query: 283 DCSSQIIHCDIKPQNILLDDHYNA---RISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPE 339
+ I+H D+KP+N+LL +++DFGLA + +Q A GT GY++PE
Sbjct: 121 --LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA--GTPGYLSPE 176
Query: 340 WYRKSTITAKVDVYSFGVLL 359
RK VD+++ GV+L
Sbjct: 177 VLRKDPYGKPVDMWACGVIL 196
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 26/202 (12%)
Query: 173 GRGSFGIV---YKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLV 227
G G+ GIV Y ++E VA+KKL R FQ+ K E+V++ +HKN++
Sbjct: 35 GSGAQGIVCAAYDAILERN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 88
Query: 228 RLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 281
LL +E Q+ +V E ++ L + ++ + + +Q+ G+ +LH
Sbjct: 89 GLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHLH 145
Query: 282 EDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S+ IIH D+KP NI++ +I DFGLA+ + + T+ Y APE
Sbjct: 146 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMVPFVVTRYYRAPEVI 199
Query: 342 RKSTITAKVDVYSFGVLLLEII 363
VD++S G ++ E+I
Sbjct: 200 LGMGYKENVDIWSVGCIMGEMI 221
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 11/200 (5%)
Query: 165 TDNFK--EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH 222
TD ++ EE G+G+F +V + + T A + +D +K + E +
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQK-LEREARICRLLK 61
Query: 223 HKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHE 282
H N+VRL E LV++ + G L + S ++ QI + + H
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHL 121
Query: 283 DCSSQIIHCDIKPQNILLDDHYNA---RISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPE 339
+ I+H D+KP+N+LL +++DFGLA + +Q A GT GY++PE
Sbjct: 122 NG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA--GTPGYLSPE 176
Query: 340 WYRKSTITAKVDVYSFGVLL 359
RK VD+++ GV+L
Sbjct: 177 VLRKDPYGKPVDMWACGVIL 196
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 25/193 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKN-----EVVVIGQTHHKNLV 227
G G F VYK + + VA+KK+ + K+ N E+ ++ + H N++
Sbjct: 19 GEGQFATVYKA---RDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 75
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGN---LKPSWNLRTNIAFQIARGLLYLHEDC 284
LL N LV++F+ L + N L PS +++ + + +GL YLH+
Sbjct: 76 GLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPS-HIKAYMLMTL-QGLEYLHQHW 132
Query: 285 SSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKS 344
I+H D+KP N+LLD++ +++DFGLA K+ + R V WYR
Sbjct: 133 ---ILHRDLKPNNLLLDENGVLKLADFGLA--------KSFGSPNRAYXHQVVTRWYRAP 181
Query: 345 TITAKVDVYSFGV 357
+ +Y GV
Sbjct: 182 ELLFGARMYGVGV 194
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 103/214 (48%), Gaps = 26/214 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL-L 230
G GSFG+VY+ + S VA+KK V Q K FKN E+ ++ + H N+VRL
Sbjct: 29 GNGSFGVVYQAKLCD---SGELVAIKK---VLQG--KAFKNRELQIMRKLDHCNIVRLRY 80
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLHE 282
F G+ + VY L + + ++ + + + +Q+ R L Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 139
Query: 283 DCSSQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S I H DIKPQN+LLD D ++ DFG AK L + ++ Y APE
Sbjct: 140 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---SRYYRAPELI 194
Query: 342 RKST-ITAKVDVYSFGVLLLEIISCRKSFDIEMG 374
+T T+ +DV+S G +L E++ + F + G
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 94/210 (44%), Gaps = 18/210 (8%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEV----VVIGQTH 222
+F + G+GSFG K ++ + AVK L + +KE K+ + V++
Sbjct: 41 HFLKVIGKGSFG---KVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97
Query: 223 HKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN---LKPSWNLRTNIAFQIARGLLY 279
H LV L V +++N G L L L+P A +IA L Y
Sbjct: 98 HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF---YAAEIASALGY 154
Query: 280 LHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPE 339
LH S I++ D+KP+NILLD + ++DFGL K + S T + GT Y+APE
Sbjct: 155 LH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTT--STFCGTPEYLAPE 209
Query: 340 WYRKSTITAKVDVYSFGVLLLEIISCRKSF 369
K VD + G +L E++ F
Sbjct: 210 VLHKQPYDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 170 EEAGRGSFGIVYKGVIETT--RTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 227
E G+G F +V + + T + + V V K ++ K E + H ++V
Sbjct: 30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTL---------ASFLFGNLKPSWNLRTNIAFQIARGLL 278
LL +V+EF++ L A F++ S +R QI L
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR-----QILEALR 144
Query: 279 YLHEDCSSQIIHCDIKPQNILLDDHYNA---RISDFGLAKLLTLNQSKTIKTAIRGTKGY 335
Y H++ IIH D+KP +LL N+ ++ FG+A + L +S + GT +
Sbjct: 145 YCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA--IQLGESGLVAGGRVGTPHF 199
Query: 336 VAPEWYRKSTITAKVDVYSFGVLLLEIIS 364
+APE ++ VDV+ GV+L ++S
Sbjct: 200 MAPEVVKREPYGKPVDVWGCGVILFILLS 228
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 23/205 (11%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 231
G GSF I K V + S A AVK + R+ + +KE + G H N+V+L
Sbjct: 20 GEGSFSICRKCV---HKKSNQAFAVKIISKRMEANTQKEITALKLCEG---HPNIVKLHE 73
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLL----YLHEDCSSQ 287
+ + LV E LN G L F +K + A I R L+ ++H+
Sbjct: 74 VFHDQLHTFLVMELLNGGEL----FERIKKKKHFSETEASYIMRKLVSAVSHMHD---VG 126
Query: 288 IIHCDIKPQNILL---DDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKS 344
++H D+KP+N+L +D+ +I DFG A+L + ++ +KT T Y APE ++
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD-NQPLKTPCF-TLHYAAPELLNQN 184
Query: 345 TITAKVDVYSFGVLLLEIISCRKSF 369
D++S GV+L ++S + F
Sbjct: 185 GYDESCDLWSLGVILYTMLSGQVPF 209
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 99/220 (45%), Gaps = 32/220 (14%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 229
E G G FG V+K R +K RV + EK + EV + + H N+V
Sbjct: 17 ELIGSGGFGQVFKA---KHRIDGKTYVIK---RVKYNNEKA-EREVKALAKLDHVNIVHY 69
Query: 230 LGFCD----------EGQNR------LLVYEFLNNGTLASFLFGNLKPSWN--LRTNIAF 271
G D + +R + EF + GTL ++ + L +
Sbjct: 70 NGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFE 129
Query: 272 QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRG 331
QI +G+ Y+H S ++I+ D+KP NI L D +I DFGL L N K ++ +G
Sbjct: 130 QITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLK-NDGKRXRS--KG 183
Query: 332 TKGYVAPEWYRKSTITAKVDVYSFGVLLLEIIS-CRKSFD 370
T Y++PE +VD+Y+ G++L E++ C +F+
Sbjct: 184 TLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFE 223
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 170 EEAGRGSFGIVYKGVIETT--RTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 227
E G+G F +V + + T + + V V K ++ K E + H ++V
Sbjct: 32 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 91
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTL---------ASFLFGNLKPSWNLRTNIAFQIARGLL 278
LL +V+EF++ L A F++ S +R QI L
Sbjct: 92 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR-----QILEALR 146
Query: 279 YLHEDCSSQIIHCDIKPQNILLDDHYNA---RISDFGLAKLLTLNQSKTIKTAIRGTKGY 335
Y H++ IIH D+KP +LL N+ ++ FG+A + L +S + GT +
Sbjct: 147 YCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA--IQLGESGLVAGGRVGTPHF 201
Query: 336 VAPEWYRKSTITAKVDVYSFGVLLLEIIS 364
+APE ++ VDV+ GV+L ++S
Sbjct: 202 MAPEVVKREPYGKPVDVWGCGVILFILLS 230
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 102/236 (43%), Gaps = 32/236 (13%)
Query: 147 GTVETNLR---CFSYKALEEAT--DNFKE--EAGRGSFGIVYKGVIETTRTSTTAVAVKK 199
GT+E + S A AT D ++ + G G++G VYK I+T T A+ +
Sbjct: 10 GTLEAQTQGPGSMSVSAAPSATSIDRYRRITKLGEGTYGEVYKA-IDTVTNETVAIKRIR 68
Query: 200 LDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNL 259
L+ + EV ++ + H+N++ L L++E+ N L ++ N
Sbjct: 69 LEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEND-LKKYMDKNP 127
Query: 260 KPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILL-----DDHYNARISDFGLA 314
S + + +Q+ G+ + H S + +H D+KPQN+LL + +I DFGLA
Sbjct: 128 DVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA 184
Query: 315 KLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTI-------TAKVDVYSFGVLLLEII 363
+ + IR + WYR I + VD++S + E++
Sbjct: 185 RAFGI--------PIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 99/224 (44%), Gaps = 28/224 (12%)
Query: 152 NLRCFSYKALEE---ATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE 208
L+ Y+ EE AT + GRGSFG V++ +E +T K VF+
Sbjct: 80 KLKPVDYEYREEVHWATHQLR--LGRGSFGEVHR--MEDKQTGFQCAVKKVRLEVFR--- 132
Query: 209 KEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN 268
E++ +V L G EG + E L G+L + K L +
Sbjct: 133 ---AEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV----KEQGCLPED 185
Query: 269 IAF----QIARGLLYLHEDCSSQIIHCDIKPQNILLD-DHYNARISDFGLAKLLT---LN 320
A Q GL YLH S +I+H D+K N+LL D +A + DFG A L L
Sbjct: 186 RALYYLGQALEGLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLG 242
Query: 321 QSKTIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIIS 364
+S I GT+ ++APE + AKVDV+S ++L +++
Sbjct: 243 KSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLN 286
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 104/208 (50%), Gaps = 20/208 (9%)
Query: 166 DNFKE--EAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHH 223
D+F++ E G G+ G+V+K + + V +KL + + + +N+++ Q H
Sbjct: 9 DDFEKISELGAGNGGVVFK----VSHKPSGLVMARKL--IHLEIKPAIRNQIIRELQVLH 62
Query: 224 K-NLVRLLGFC----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLL 278
+ N ++GF +G+ + + E ++ G+L L + + ++ + +GL
Sbjct: 63 ECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 121
Query: 279 YLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAP 338
YL E +I+H D+KP NIL++ ++ DFG++ L + GT+ Y++P
Sbjct: 122 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DEMANEFVGTRSYMSP 175
Query: 339 EWYRKSTITAKVDVYSFGVLLLEIISCR 366
E + + + + D++S G+ L+E+ R
Sbjct: 176 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 21/206 (10%)
Query: 173 GRGSFGIVYKGVIETTRTSTTA--VAVKKLDRV---FQDGEKEFKNEVVVIG--QTHHKN 225
GRG FG VY R + T A+K LD+ + GE NE +++ T
Sbjct: 198 GRGGFGEVY-----GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCP 252
Query: 226 LVRLLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDC 284
+ + + ++L + + +N G L L + S A +I GL ++H
Sbjct: 253 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH--- 309
Query: 285 SSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKS 344
+ +++ D+KP NILLD+H + RISD GLA + SK A GT GY+APE +K
Sbjct: 310 NRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMAPEVLQKG 365
Query: 345 TI-TAKVDVYSFGVLLLEIISCRKSF 369
+ D +S G +L +++ F
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 21/206 (10%)
Query: 173 GRGSFGIVYKGVIETTRTSTTA--VAVKKLDRV---FQDGEKEFKNEVVVIG--QTHHKN 225
GRG FG VY R + T A+K LD+ + GE NE +++ T
Sbjct: 197 GRGGFGEVY-----GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCP 251
Query: 226 LVRLLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDC 284
+ + + ++L + + +N G L L + S A +I GL ++H
Sbjct: 252 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH--- 308
Query: 285 SSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKS 344
+ +++ D+KP NILLD+H + RISD GLA + SK A GT GY+APE +K
Sbjct: 309 NRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMAPEVLQKG 364
Query: 345 TI-TAKVDVYSFGVLLLEIISCRKSF 369
+ D +S G +L +++ F
Sbjct: 365 VAYDSSADWFSLGCMLFKLLRGHSPF 390
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 106/244 (43%), Gaps = 50/244 (20%)
Query: 163 EATDNF--KEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVI 218
+ DN+ K GRGS+G VY + + + VA+KK++R+F+D K E+ ++
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVY---LAYDKNANKNVAIKKVNRMFEDLIDCKRILREITIL 81
Query: 219 GQTHHKNLVRLLGFC--------DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA 270
+ ++RL DE +V E ++ F +++T I
Sbjct: 82 NRLKSDYIIRLHDLIIPEDLLKFDE---LYIVLEIADSDLKKLFKTPIFLTEQHVKT-IL 137
Query: 271 FQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTI----- 325
+ + G ++HE S IIH D+KP N LL+ + +I DFGLA+ T+N K I
Sbjct: 138 YNLLLGEKFIHE---SGIIHRDLKPANCLLNQDCSVKICDFGLAR--TINSDKDIHIVND 192
Query: 326 --------------KTAIRGTKGYVAPEWYRKSTI-------TAKVDVYSFGVLLLEIIS 364
K + +V WYR + T +D++S G + E+++
Sbjct: 193 LEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLN 252
Query: 365 CRKS 368
KS
Sbjct: 253 MMKS 256
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 21/206 (10%)
Query: 173 GRGSFGIVYKGVIETTRTSTTA--VAVKKLDRV---FQDGEKEFKNEVVVIG--QTHHKN 225
GRG FG VY R + T A+K LD+ + GE NE +++ T
Sbjct: 198 GRGGFGEVY-----GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCP 252
Query: 226 LVRLLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDC 284
+ + + ++L + + +N G L L + S A +I GL ++H
Sbjct: 253 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH--- 309
Query: 285 SSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKS 344
+ +++ D+KP NILLD+H + RISD GLA + SK A GT GY+APE +K
Sbjct: 310 NRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMAPEVLQKG 365
Query: 345 TI-TAKVDVYSFGVLLLEIISCRKSF 369
+ D +S G +L +++ F
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 21/206 (10%)
Query: 173 GRGSFGIVYKGVIETTRTSTTA--VAVKKLDRV---FQDGEKEFKNEVVVIG--QTHHKN 225
GRG FG VY R + T A+K LD+ + GE NE +++ T
Sbjct: 198 GRGGFGEVY-----GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCP 252
Query: 226 LVRLLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDC 284
+ + + ++L + + +N G L L + S A +I GL ++H
Sbjct: 253 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH--- 309
Query: 285 SSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKS 344
+ +++ D+KP NILLD+H + RISD GLA + SK A GT GY+APE +K
Sbjct: 310 NRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMAPEVLQKG 365
Query: 345 TI-TAKVDVYSFGVLLLEIISCRKSF 369
+ D +S G +L +++ F
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 5/101 (4%)
Query: 271 FQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKT-IKTAI 329
+QI RGL Y+H S+ ++H D+KP N+LL+ + +I DFGLA++ + T
Sbjct: 135 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEX 191
Query: 330 RGTKGYVAPEWYRKST-ITAKVDVYSFGVLLLEIISCRKSF 369
T+ Y APE S T +D++S G +L E++S R F
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 5/101 (4%)
Query: 271 FQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKT-IKTAI 329
+QI RGL Y+H S+ ++H D+KP N+LL+ + +I DFGLA++ + T
Sbjct: 136 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEX 192
Query: 330 RGTKGYVAPEWYRKST-ITAKVDVYSFGVLLLEIISCRKSF 369
T+ Y APE S T +D++S G +L E++S R F
Sbjct: 193 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 233
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 105/234 (44%), Gaps = 39/234 (16%)
Query: 160 ALEEATDNFKEEA--GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVV 217
+L A+D F+E A G+G+FG V K + A+KK+ R ++ +EV +
Sbjct: 1 SLRYASD-FEEIAVLGQGAFGQVVKA---RNALDSRYYAIKKI-RHTEEKLSTILSEVXL 55
Query: 218 IGQTHHKNLVRLLGFCDEGQN-------------RLLVYEFLNNGTLASFLFG-NLKPSW 263
+ +H+ +VR E +N + E+ N TL + NL
Sbjct: 56 LASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQR 115
Query: 264 NLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAK-------L 316
+ + QI L Y+H S IIH ++KP NI +D+ N +I DFGLAK +
Sbjct: 116 DEYWRLFRQILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDI 172
Query: 317 LTLN------QSKTIKTAIRGTKGYVAPEWYRKS-TITAKVDVYSFGVLLLEII 363
L L+ S + +AI GT YVA E + K+D YS G++ E I
Sbjct: 173 LKLDSQNLPGSSDNLTSAI-GTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 103/214 (48%), Gaps = 26/214 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL-L 230
G GSFG+VY+ + S VA+KK V Q K FKN E+ ++ + H N+VRL
Sbjct: 29 GNGSFGVVYQAKLCD---SGELVAIKK---VLQG--KAFKNRELQIMRKLDHCNIVRLRY 80
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLHE 282
F G+ + VY L + ++ + + + +Q+ R L Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 139
Query: 283 DCSSQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S I H DIKPQN+LLD D ++ DFG AK L + + ++ Y APE
Sbjct: 140 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRYYRAPELI 194
Query: 342 RKST-ITAKVDVYSFGVLLLEIISCRKSFDIEMG 374
+T T+ +DV+S G +L E++ + F + G
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 103/214 (48%), Gaps = 26/214 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL-L 230
G GSFG+VY+ + S VA+KK V Q K FKN E+ ++ + H N+VRL
Sbjct: 29 GNGSFGVVYQAKLCD---SGELVAIKK---VLQG--KAFKNRELQIMRKLDHCNIVRLRY 80
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLHE 282
F G+ + VY L + ++ + + + +Q+ R L Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 139
Query: 283 DCSSQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
S I H DIKPQN+LLD D ++ DFG AK L + + ++ Y APE
Sbjct: 140 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRYYRAPELI 194
Query: 342 RKST-ITAKVDVYSFGVLLLEIISCRKSFDIEMG 374
+T T+ +DV+S G +L E++ + F + G
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 140/330 (42%), Gaps = 56/330 (16%)
Query: 136 KKKWIRNSPGDGTVETNLRCFSYKALEEATDNF---KEEAGRGSFG-IVYKGVIETTRTS 191
KKK R S G G R + E++ N ++ G GS G +V++G +
Sbjct: 3 KKKRKRGSRG-GKKGRKSRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGR--- 58
Query: 192 TTAVAVKKLDRVFQD-GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEF-LNNG 249
VAVK++ F D E K ++ H N++R +C E +R L L N
Sbjct: 59 --PVAVKRMLIDFCDIALMEIK---LLTESDDHPNVIRY--YCSETTDRFLYIALELCNL 111
Query: 250 TLASFLFGNLKPSWNLRTNIAF-------QIARGLLYLHEDCSSQIIHCDIKPQNILL-- 300
L + NL+ + QIA G+ +LH S +IIH D+KPQNIL+
Sbjct: 112 NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVST 168
Query: 301 ------DDHYNAR-----ISDFGLAKLLTLNQS--KTIKTAIRGTKGYVAPEWYRKST-- 345
D A ISDFGL K L Q + GT G+ APE +ST
Sbjct: 169 SSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKR 228
Query: 346 -ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAM 404
+T +D++S G + I+S K G++Y+ ++ + LD +M+ +
Sbjct: 229 RLTRSIDIFSMGCVFYYILSKGKH---PFGDKYSRESNIIRGIF---SLD-----EMKCL 277
Query: 405 NDIKCVEKLLMVSIWCIQEDPSLRPTMRKV 434
+D + + + I DP RPT KV
Sbjct: 278 HDRSLIAEATDLISQMIDHDPLKRPTAMKV 307
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 26/210 (12%)
Query: 166 DNFKEEAGR-GSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHK 224
++F E G G FG VYK + ++ A K +D ++ +++ E+ ++ H
Sbjct: 11 EDFWEIIGELGDFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHP 67
Query: 225 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA-FQIARGLLYLHED 283
N+V+LL N ++ EF G + + + +P + + Q L YLH++
Sbjct: 68 NIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN 127
Query: 284 CSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIR------GTKGYVA 337
+IIH D+K NIL + +++DFG++ +K +T I+ GT ++A
Sbjct: 128 ---KIIHRDLKAGNILFTLDGDIKLADFGVS-------AKNTRTXIQRRDSFIGTPYWMA 177
Query: 338 PEWY-----RKSTITAKVDVYSFGVLLLEI 362
PE + K DV+S G+ L+E+
Sbjct: 178 PEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 140/330 (42%), Gaps = 56/330 (16%)
Query: 136 KKKWIRNSPGDGTVETNLRCFSYKALEEATDNF---KEEAGRGSFG-IVYKGVIETTRTS 191
KKK R S G G R + E++ N ++ G GS G +V++G +
Sbjct: 3 KKKRKRGSRG-GKKGRKSRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGR--- 58
Query: 192 TTAVAVKKLDRVFQD-GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEF-LNNG 249
VAVK++ F D E K ++ H N++R +C E +R L L N
Sbjct: 59 --PVAVKRMLIDFCDIALMEIK---LLTESDDHPNVIRY--YCSETTDRFLYIALELCNL 111
Query: 250 TLASFLFGNLKPSWNLRTNIAF-------QIARGLLYLHEDCSSQIIHCDIKPQNILL-- 300
L + NL+ + QIA G+ +LH S +IIH D+KPQNIL+
Sbjct: 112 NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVST 168
Query: 301 ------DDHYNAR-----ISDFGLAKLLTLNQS--KTIKTAIRGTKGYVAPEWYRKST-- 345
D A ISDFGL K L Q + GT G+ APE +ST
Sbjct: 169 SSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKR 228
Query: 346 -ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAM 404
+T +D++S G + I+S K G++Y+ ++ + LD +M+ +
Sbjct: 229 RLTRSIDIFSMGCVFYYILSKGKH---PFGDKYSRESNIIRGIF---SLD-----EMKCL 277
Query: 405 NDIKCVEKLLMVSIWCIQEDPSLRPTMRKV 434
+D + + + I DP RPT KV
Sbjct: 278 HDRSLIAEATDLISQMIDHDPLKRPTAMKV 307
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 97/203 (47%), Gaps = 24/203 (11%)
Query: 171 EAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 230
E G G+FG VYK + + A K ++ ++ +++ E+ ++ H +V+LL
Sbjct: 18 ELGDGAFGKVYKA---KNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLL 74
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLF----GNLKPSWNLRTNIAFQIARGLLYLHEDCSS 286
G ++ EF G + + + G +P + + Q+ L +LH S
Sbjct: 75 GAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV---VCRQMLEALNFLH---SK 128
Query: 287 QIIHCDIKPQNILLDDHYNARISDFGLA--KLLTLNQSKTIKTAIRGTKGYVAP-----E 339
+IIH D+K N+L+ + R++DFG++ L TL + + + GT ++AP E
Sbjct: 129 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQK----RDSFIGTPYWMAPEVVMCE 184
Query: 340 WYRKSTITAKVDVYSFGVLLLEI 362
+ + K D++S G+ L+E+
Sbjct: 185 TMKDTPYDYKADIWSLGITLIEM 207
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 97/203 (47%), Gaps = 24/203 (11%)
Query: 171 EAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 230
E G G+FG VYK + + A K ++ ++ +++ E+ ++ H +V+LL
Sbjct: 26 ELGDGAFGKVYKA---KNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLL 82
Query: 231 GFCDEGQNRLLVYEFLNNGTLASFLF----GNLKPSWNLRTNIAFQIARGLLYLHEDCSS 286
G ++ EF G + + + G +P + + Q+ L +LH S
Sbjct: 83 GAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV---VCRQMLEALNFLH---SK 136
Query: 287 QIIHCDIKPQNILLDDHYNARISDFGLA--KLLTLNQSKTIKTAIRGTKGYVAP-----E 339
+IIH D+K N+L+ + R++DFG++ L TL + + + GT ++AP E
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQK----RDSFIGTPYWMAPEVVMCE 192
Query: 340 WYRKSTITAKVDVYSFGVLLLEI 362
+ + K D++S G+ L+E+
Sbjct: 193 TMKDTPYDYKADIWSLGITLIEM 215
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 126/294 (42%), Gaps = 56/294 (19%)
Query: 173 GRGSFG-IVYKGVIETTRTSTTAVAVKKLDRVFQD-GEKEFKNEVVVIGQTHHKNLVRLL 230
G GS G +V++G + VAVK++ F D E K ++ H N++R
Sbjct: 24 GYGSSGTVVFQGSFQGR-----PVAVKRMLIDFCDIALMEIK---LLTESDDHPNVIRY- 74
Query: 231 GFCDEGQNRLLVYEF-LNNGTLASFLFGNLKPSWNLRTNIAF-------QIARGLLYLHE 282
+C E +R L L N L + NL+ + QIA G+ +LH
Sbjct: 75 -YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH- 132
Query: 283 DCSSQIIHCDIKPQNILL--------DDHYNAR-----ISDFGLAKLLTLNQS--KTIKT 327
S +IIH D+KPQNIL+ D A ISDFGL K L QS +T
Sbjct: 133 --SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLN 190
Query: 328 AIRGTKGYVAPEWYRKST-------ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 380
GT G+ APE +S +T +D++S G + I+S K G++Y+
Sbjct: 191 NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH---PFGDKYSRE 247
Query: 381 TDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKV 434
++ + LD +M+ ++D + + + I DP RPT KV
Sbjct: 248 SNIIRGIF---SLD-----EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 293
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 98/224 (43%), Gaps = 28/224 (12%)
Query: 152 NLRCFSYKALEE---ATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE 208
L+ Y+ EE AT + GRGSFG V++ +E +T K VF+
Sbjct: 61 KLKPVDYEYREEVHWATHQLR--LGRGSFGEVHR--MEDKQTGFQCAVKKVRLEVFR--- 113
Query: 209 KEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN 268
E++ +V L G EG + E L G+L + K L +
Sbjct: 114 ---AEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV----KEQGCLPED 166
Query: 269 IAF----QIARGLLYLHEDCSSQIIHCDIKPQNILLD-DHYNARISDFGLAKLLT---LN 320
A Q GL YLH S +I+H D+K N+LL D +A + DFG A L L
Sbjct: 167 RALYYLGQALEGLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLG 223
Query: 321 QSKTIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIIS 364
+ I GT+ ++APE + AKVDV+S ++L +++
Sbjct: 224 KDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLN 267
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 97/226 (42%), Gaps = 20/226 (8%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVF----QDGEKEFKNEVVVIGQTHHKNLVR 228
G+G +G V++ T + A+K L + K E ++ + H +V
Sbjct: 26 GKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVD 85
Query: 229 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDC 284
L+ G L+ E+L+ G L F L+ + A +I+ L +LH+
Sbjct: 86 LIYAFQTGGKLYLILEYLSGGEL----FMQLEREGIFMEDTACFYLAEISMALGHLHQ-- 139
Query: 285 SSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKS 344
II+ D+KP+NI+L+ + +++DFGL K T+ GT Y+APE +S
Sbjct: 140 -KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESI--HDGTVTHTFCGTIEYMAPEILMRS 196
Query: 345 TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN 390
VD +S G L+ ++++ F GE D C N
Sbjct: 197 GHNRAVDWWSLGALMYDMLTGAPPF---TGENRKKTIDKILKCKLN 239
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 97/226 (42%), Gaps = 20/226 (8%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVF----QDGEKEFKNEVVVIGQTHHKNLVR 228
G+G +G V++ T + A+K L + K E ++ + H +V
Sbjct: 26 GKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVD 85
Query: 229 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDC 284
L+ G L+ E+L+ G L F L+ + A +I+ L +LH+
Sbjct: 86 LIYAFQTGGKLYLILEYLSGGEL----FMQLEREGIFMEDTACFYLAEISMALGHLHQ-- 139
Query: 285 SSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKS 344
II+ D+KP+NI+L+ + +++DFGL K T+ GT Y+APE +S
Sbjct: 140 -KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESI--HDGTVTHXFCGTIEYMAPEILMRS 196
Query: 345 TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN 390
VD +S G L+ ++++ F GE D C N
Sbjct: 197 GHNRAVDWWSLGALMYDMLTGAPPF---TGENRKKTIDKILKCKLN 239
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 90/191 (47%), Gaps = 15/191 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
GRGS+G V V + TR A KK+ + F + FK E+ ++ H N++RL
Sbjct: 18 GRGSWGEVKIAVQKGTRIRR---AAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYET 74
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSS-QIIHC 291
++ + LV E G LF + R + A +I + +L C + H
Sbjct: 75 FEDNTDIYLVMELCTGGE----LFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHR 130
Query: 292 DIKPQNIL-LDDHYNA--RISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITA 348
D+KP+N L L D ++ ++ DFGLA K ++T + GT YV+P+ +
Sbjct: 131 DLKPENFLFLTDSPDSPLKLIDFGLAA--RFKPGKMMRTKV-GTPYYVSPQ-VLEGLYGP 186
Query: 349 KVDVYSFGVLL 359
+ D +S GV++
Sbjct: 187 ECDEWSAGVMM 197
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 101/236 (42%), Gaps = 37/236 (15%)
Query: 163 EATDNF--KEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVI 218
DN+ K GRGS+G VY + T + VA+KK++R+F+D K E+ ++
Sbjct: 23 HVPDNYIIKHLIGRGSYGYVYLAYDKNTEKN---VAIKKVNRMFEDLIDCKRILREITIL 79
Query: 219 GQTHHKNLVRLLGFCDEGQ-----NRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQI 273
+ ++RL +V E ++ F +++T I + +
Sbjct: 80 NRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKT-ILYNL 138
Query: 274 ARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTI-------- 325
G ++HE S IIH D+KP N LL+ + ++ DFGLA+ + + I
Sbjct: 139 LLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENE 195
Query: 326 ------KTAIRGTKGYVAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKS 368
K + +V WYR + T +D++S G + E+++ +S
Sbjct: 196 EPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQS 251
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 90/191 (47%), Gaps = 15/191 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
GRGS+G V V + TR A KK+ + F + FK E+ ++ H N++RL
Sbjct: 35 GRGSWGEVKIAVQKGTRIRR---AAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYET 91
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSS-QIIHC 291
++ + LV E G LF + R + A +I + +L C + H
Sbjct: 92 FEDNTDIYLVMELCTGGE----LFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHR 147
Query: 292 DIKPQNIL-LDDHYNA--RISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITA 348
D+KP+N L L D ++ ++ DFGLA K ++T + GT YV+P+ +
Sbjct: 148 DLKPENFLFLTDSPDSPLKLIDFGLAA--RFKPGKMMRTKV-GTPYYVSPQ-VLEGLYGP 203
Query: 349 KVDVYSFGVLL 359
+ D +S GV++
Sbjct: 204 ECDEWSAGVMM 214
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 100/240 (41%), Gaps = 44/240 (18%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKNLVRLLG 231
GRG FG+V++ + A+K++ ++ +E EV + + H +VR
Sbjct: 14 GRGGFGVVFEA---KNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFN 70
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLF--------GNLKPSWNLR-----------TNIAFQ 272
E E L + +L+ NLK N R +I Q
Sbjct: 71 AWLEKNTT----EKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQ 126
Query: 273 IARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAK----------LLTLNQS 322
IA + +LH S ++H D+KP NI ++ DFGL +LT +
Sbjct: 127 IAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 323 KTIKTAIRGTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTD 382
T GTK Y++PE ++ + KVD++S G++L E++ F +M E LTD
Sbjct: 184 YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM-ERVRTLTD 239
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + S A+K LD+ K+ + NE ++ + LV+L
Sbjct: 50 GTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E++ G + S L + S A QI YLH S +I
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+L+D +++DFG AK + K + GT Y+APE
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLXGTPEYLAPEIILSKGYNKA 218
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 109/260 (41%), Gaps = 24/260 (9%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+G F Y+ T+ V K + +++ E+ + + ++V GF
Sbjct: 51 GKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGF 110
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCD 292
++ +V E +L + Q +G+ YLH ++++IH D
Sbjct: 111 FEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLH---NNRVIHRD 167
Query: 293 IKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDV 352
+K N+ L+D + +I DFGLA + + + K + GT Y+APE K + +VD+
Sbjct: 168 LKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKTLCGTPNYIAPEVLCKKGHSFEVDI 225
Query: 353 YSFGVLLLEIISCRKSFDIE-MGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVE 411
+S G +L ++ + F+ + E Y + + R+ I V
Sbjct: 226 WSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH----------------INPVA 269
Query: 412 KLLMVSIWCIQEDPSLRPTM 431
L+ + + DP+LRP++
Sbjct: 270 SALIRRM--LHADPTLRPSV 287
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + S A+K LD+ K+ + NE ++ + LV+L
Sbjct: 50 GTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E++ G + S L + S A QI YLH S +I
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+L+D +++DFG AK + + +T A GT Y+APE
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLA--GTPEYLAPEIILSKGYNKA 218
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 89/193 (46%), Gaps = 19/193 (9%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK---EFKNEVVVIGQTHHKNLVRL 229
G G+FG+ + + + VAVK ++R GEK K E++ H N+VR
Sbjct: 28 GAGNFGVAR---LMRDKQANELVAVKYIER----GEKIDENVKREIINHRSLRHPNIVRF 80
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ +V E+ + G L + + S + Q+ G+ Y H + Q+
Sbjct: 81 KEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAH---AMQVA 137
Query: 290 HCDIKPQNILLDDHYNAR--ISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
H D+K +N LLD R I+DFG +K L+ K+A+ GT Y+APE K
Sbjct: 138 HRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQP--KSAV-GTPAYIAPEVLLKKEYD 194
Query: 348 AKV-DVYSFGVLL 359
KV DV+S GV L
Sbjct: 195 GKVADVWSCGVTL 207
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 109/260 (41%), Gaps = 24/260 (9%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+G F Y+ T+ V K + +++ E+ + + ++V GF
Sbjct: 51 GKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGF 110
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCD 292
++ +V E +L + Q +G+ YLH ++++IH D
Sbjct: 111 FEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLH---NNRVIHRD 167
Query: 293 IKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDV 352
+K N+ L+D + +I DFGLA + + + K + GT Y+APE K + +VD+
Sbjct: 168 LKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKXLCGTPNYIAPEVLCKKGHSFEVDI 225
Query: 353 YSFGVLLLEIISCRKSFDIE-MGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVE 411
+S G +L ++ + F+ + E Y + + R+ I V
Sbjct: 226 WSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH----------------INPVA 269
Query: 412 KLLMVSIWCIQEDPSLRPTM 431
L+ + + DP+LRP++
Sbjct: 270 SALIRRM--LHADPTLRPSV 287
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + S A+K LD+ K+ + NE ++ + LV+L
Sbjct: 71 GTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 127
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E++ G + S L + S A QI YLH S +I
Sbjct: 128 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 184
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+L+D +++DFG AK + K + GT Y+APE
Sbjct: 185 YRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGATWTLCGTPEYLAPEIILSKGYNKA 239
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 240 VDWWALGVLIYEMAAGYPPF 259
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 109/260 (41%), Gaps = 24/260 (9%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+G F Y+ T+ V K + +++ E+ + + ++V GF
Sbjct: 35 GKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGF 94
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCD 292
++ +V E +L + Q +G+ YLH ++++IH D
Sbjct: 95 FEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLH---NNRVIHRD 151
Query: 293 IKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDV 352
+K N+ L+D + +I DFGLA + + + K + GT Y+APE K + +VD+
Sbjct: 152 LKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKDLCGTPNYIAPEVLCKKGHSFEVDI 209
Query: 353 YSFGVLLLEIISCRKSFDIE-MGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVE 411
+S G +L ++ + F+ + E Y + + R+ I V
Sbjct: 210 WSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH----------------INPVA 253
Query: 412 KLLMVSIWCIQEDPSLRPTM 431
L+ + + DP+LRP++
Sbjct: 254 SALIRRM--LHADPTLRPSV 271
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + S A+K LD+ K+ + NE ++ + LV+L
Sbjct: 37 GTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 93
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E++ G + S L + S A QI YLH S +I
Sbjct: 94 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 150
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+L+D+ +++DFG AK + K + GT Y+APE
Sbjct: 151 YRDLKPENLLIDEQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 205
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 206 VDWWALGVLIYEMAAGYPPF 225
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 89/199 (44%), Gaps = 21/199 (10%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 231
GRGSFG V++ + + AVKK+ VF+ E+V +V L G
Sbjct: 81 GRGSFGEVHR---MKDKQTGFQCAVKKVRLEVFR------VEELVACAGLSSPRIVPLYG 131
Query: 232 FCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
EG + E L G+L + G L L Q GL YLH + +I+
Sbjct: 132 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRAL--YYLGQALEGLEYLH---TRRIL 186
Query: 290 HCDIKPQNILLD-DHYNARISDFGLAKLLT---LNQSKTIKTAIRGTKGYVAPEWYRKST 345
H D+K N+LL D A + DFG A L L +S I GT+ ++APE
Sbjct: 187 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 246
Query: 346 ITAKVDVYSFGVLLLEIIS 364
AKVD++S ++L +++
Sbjct: 247 CDAKVDIWSSCCMMLHMLN 265
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 90/205 (43%), Gaps = 21/205 (10%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKN 225
+ GRGSFG V++ + + AVKK+ VF+ E+V
Sbjct: 61 THQPRVGRGSFGEVHR---MKDKQTGFQCAVKKVRLEVFR------VEELVACAGLSSPR 111
Query: 226 LVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHED 283
+V L G EG + E L G+L + G L L Q GL YLH
Sbjct: 112 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRAL--YYLGQALEGLEYLH-- 167
Query: 284 CSSQIIHCDIKPQNILLD-DHYNARISDFGLAKLLT---LNQSKTIKTAIRGTKGYVAPE 339
+ +I+H D+K N+LL D A + DFG A L L +S I GT+ ++APE
Sbjct: 168 -TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPE 226
Query: 340 WYRKSTITAKVDVYSFGVLLLEIIS 364
AKVD++S ++L +++
Sbjct: 227 VVMGKPCDAKVDIWSSCCMMLHMLN 251
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 120/279 (43%), Gaps = 30/279 (10%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKN 225
+E G G+ +V + VA+K+++ Q E E+ + Q HH N
Sbjct: 18 ELQEVIGSGATAVVQAAYCAPKKEK---VAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 226 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLF-----GNLKPSWNLRTNIAF---QIARGL 277
+V LV + L+ G++ + G K + IA ++ GL
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 278 LYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLT----LNQSKTIKTAIRGTK 333
YLH++ IH D+K NILL + + +I+DFG++ L + ++K KT + GT
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV-GTP 190
Query: 334 GYVAPEWYRK-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGK 392
++APE + K D++SFG+ +E+ + + +Y + +
Sbjct: 191 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY-----HKYPPMKVLMLTLQNDPP 245
Query: 393 LDDLVEGDMEAMNDI-KCVEKLLMVSIWCIQEDPSLRPT 430
+ D E + K K M+S+ C+Q+DP RPT
Sbjct: 246 SLETGVQDKEMLKKYGKSFRK--MISL-CLQKDPEKRPT 281
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 16/160 (10%)
Query: 210 EFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI 269
+FKNE+ +I ++ + G ++YE++ N ++ F N I
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 270 AFQIARGLL--------YLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQ 321
Q+ + ++ Y+H + I H D+KP NIL+D + ++SDFG ++ +
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGESEYMV--- 203
Query: 322 SKTIKTAIRGTKGYVAPEWY--RKSTITAKVDVYSFGVLL 359
K IK + RGT ++ PE++ S AKVD++S G+ L
Sbjct: 204 DKKIKGS-RGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 120/279 (43%), Gaps = 30/279 (10%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKN 225
+E G G+ +V + VA+K+++ Q E E+ + Q HH N
Sbjct: 13 ELQEVIGSGATAVVQAAYCAPKKEK---VAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 226 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLF-----GNLKPSWNLRTNIAF---QIARGL 277
+V LV + L+ G++ + G K + IA ++ GL
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 278 LYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLT----LNQSKTIKTAIRGTK 333
YLH++ IH D+K NILL + + +I+DFG++ L + ++K KT + GT
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV-GTP 185
Query: 334 GYVAPEWYRK-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGK 392
++APE + K D++SFG+ +E+ + + +Y + +
Sbjct: 186 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY-----HKYPPMKVLMLTLQNDPP 240
Query: 393 LDDLVEGDMEAMNDI-KCVEKLLMVSIWCIQEDPSLRPT 430
+ D E + K K M+S+ C+Q+DP RPT
Sbjct: 241 SLETGVQDKEMLKKYGKSFRK--MISL-CLQKDPEKRPT 276
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 109/260 (41%), Gaps = 24/260 (9%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+G F Y+ T+ V K + +++ E+ + + ++V GF
Sbjct: 51 GKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGF 110
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCD 292
++ +V E +L + Q +G+ YLH ++++IH D
Sbjct: 111 FEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLH---NNRVIHRD 167
Query: 293 IKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAKVDV 352
+K N+ L+D + +I DFGLA + + + K + GT Y+APE K + +VD+
Sbjct: 168 LKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKDLCGTPNYIAPEVLCKKGHSFEVDI 225
Query: 353 YSFGVLLLEIISCRKSFDIE-MGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVE 411
+S G +L ++ + F+ + E Y + + R+ I V
Sbjct: 226 WSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH----------------INPVA 269
Query: 412 KLLMVSIWCIQEDPSLRPTM 431
L+ + + DP+LRP++
Sbjct: 270 SALIRRM--LHADPTLRPSV 287
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 110/267 (41%), Gaps = 35/267 (13%)
Query: 171 EAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKN---EVVVIGQTHHKNLV 227
E G GSFG VY R S VA+KK+ + +++++ EV + + H N +
Sbjct: 61 EIGHGSFGAVY--FARDVRNSEV-VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTI 117
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIARGLLYLHEDCSS 286
+ G LV E+ G+ + L + KP + + +GL YLH S
Sbjct: 118 QYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SH 173
Query: 287 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPE---WYRK 343
+IH D+K NILL + ++ DFG A ++ GT ++APE +
Sbjct: 174 NMIHRDVKAGNILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMAPEVILAMDE 227
Query: 344 STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEA 403
KVDV+S G I+C IE+ E L F+ L + + + A
Sbjct: 228 GQYDGKVDVWSLG------ITC-----IELAERKPPL----FNMNAMSALYHIAQNESPA 272
Query: 404 MNDIKCVEKLLMVSIWCIQEDPSLRPT 430
+ E C+Q+ P RPT
Sbjct: 273 LQSGHWSEYFRNFVDSCLQKIPQDRPT 299
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 31/216 (14%)
Query: 171 EAGRGSFGIVYK------GVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHK 224
E GRG++G+V K G I + V ++ R+ D + + T +
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 117
Query: 225 NLVR------LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLL 278
L R + D ++ T+ + G IA I + L
Sbjct: 118 ALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGK----------IAVSIVKALE 167
Query: 279 YLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAP 338
+LH S +IH D+KP N+L++ ++ DFG++ L + +KTI G K Y+AP
Sbjct: 168 HLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDA---GCKPYMAP 222
Query: 339 EW----YRKSTITAKVDVYSFGVLLLEIISCRKSFD 370
E + + K D++S G+ ++E+ R +D
Sbjct: 223 ERINPELNQKGYSVKSDIWSLGITMIELAILRFPYD 258
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 90/205 (43%), Gaps = 21/205 (10%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKN 225
+ GRGSFG V++ + + AVKK+ VF+ E+V
Sbjct: 77 THQPRVGRGSFGEVHR---MKDKQTGFQCAVKKVRLEVFR------VEELVACAGLSSPR 127
Query: 226 LVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHED 283
+V L G EG + E L G+L + G L L Q GL YLH
Sbjct: 128 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRAL--YYLGQALEGLEYLH-- 183
Query: 284 CSSQIIHCDIKPQNILLD-DHYNARISDFGLAKLLT---LNQSKTIKTAIRGTKGYVAPE 339
+ +I+H D+K N+LL D A + DFG A L L +S I GT+ ++APE
Sbjct: 184 -TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPE 242
Query: 340 WYRKSTITAKVDVYSFGVLLLEIIS 364
AKVD++S ++L +++
Sbjct: 243 VVMGKPCDAKVDIWSSCCMMLHMLN 267
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 103/231 (44%), Gaps = 46/231 (19%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLL 230
G GS+G V + + VA+KK+ RVF+D K E+ ++ + +H ++V++L
Sbjct: 62 GTGSYGHVCEAY---DKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVL 118
Query: 231 GFC-----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 285
++ +V E ++ F +++T + + + G+ Y+H S
Sbjct: 119 DIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKT-LLYNLLVGVKYVH---S 174
Query: 286 SQIIHCDIKPQNILLDDHYNARISDFGLAK----------------------LLTLNQSK 323
+ I+H D+KP N L++ + ++ DFGLA+ L+T +K
Sbjct: 175 AGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTK 234
Query: 324 TIKTAIRGTKGYVAPEWYRKSTI-------TAKVDVYSFGVLLLEIISCRK 367
+K R G+V WYR + T +DV+S G + E+++ K
Sbjct: 235 NLK---RQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIK 282
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 110/267 (41%), Gaps = 35/267 (13%)
Query: 171 EAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKN---EVVVIGQTHHKNLV 227
E G GSFG VY R S VA+KK+ + +++++ EV + + H N +
Sbjct: 22 EIGHGSFGAVY--FARDVRNSEV-VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTI 78
Query: 228 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIARGLLYLHEDCSS 286
+ G LV E+ G+ + L + KP + + +GL YLH S
Sbjct: 79 QYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SH 134
Query: 287 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPE---WYRK 343
+IH D+K NILL + ++ DFG A ++ GT ++APE +
Sbjct: 135 NMIHRDVKAGNILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMAPEVILAMDE 188
Query: 344 STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEA 403
KVDV+S G I+C IE+ E L F+ L + + + A
Sbjct: 189 GQYDGKVDVWSLG------ITC-----IELAERKPPL----FNMNAMSALYHIAQNESPA 233
Query: 404 MNDIKCVEKLLMVSIWCIQEDPSLRPT 430
+ E C+Q+ P RPT
Sbjct: 234 LQSGHWSEYFRNFVDSCLQKIPQDRPT 260
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 113/260 (43%), Gaps = 36/260 (13%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKN--EVVVIGQTHHK 224
K G G++G+V T + + VA+KK++ F + E+ ++ H+
Sbjct: 14 QLKSLLGEGAYGVVCSA---THKPTGEIVAIKKIE-PFDKPLFALRTLREIKILKHFKHE 69
Query: 225 NLVRLLGFCD----EGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 280
N++ + E N + + + L L + + +++ I +Q R + L
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI-YQTLRAVKVL 128
Query: 281 HEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIR--GTKGYVAP 338
H S +IH D+KP N+L++ + + ++ DFGLA+++ + + + + G YVA
Sbjct: 129 H---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVAT 185
Query: 339 EWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNG 391
WYR + + +DV+S G +L E+ R F G +Y F
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP---GRDYRHQLLLIFG----- 237
Query: 392 KLDDLVEGDMEAMNDIKCVE 411
+ G + ND++C+E
Sbjct: 238 -----IIGTPHSDNDLRCIE 252
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + S A+K LD+ K+ + NE ++ + LV+L
Sbjct: 50 GTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E++ G + S L + S A QI YLH S +I
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+L+D +++DFG AK + K + GT Y+APE
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + S A+K LD+ K+ + NE ++ + LV+L
Sbjct: 50 GTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E++ G + S L + S A QI YLH S +I
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+L+D +++DFG AK + K + GT Y+APE
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + S A+K LD+ K+ + NE ++ + LV+L
Sbjct: 50 GTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E++ G + S L + S A QI YLH S +I
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+L+D +++DFG AK + K + GT Y+APE
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + S A+K LD+ K+ + NE ++ + LV+L
Sbjct: 50 GTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E++ G + S L + S A QI YLH S +I
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+L+D +++DFG AK + K + GT Y+APE
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + S A+K LD+ K+ + NE ++ + LV+L
Sbjct: 51 GTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E++ G + S L + S A QI YLH S +I
Sbjct: 108 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 164
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+L+D +++DFG AK + K + GT Y+APE
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 220 VDWWALGVLIYEMAAGYPPF 239
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 28/215 (13%)
Query: 166 DNFKEE--AGRGSFGIVYKGVIETTRTSTTAVAVKKL--DRVFQDGEKEFKNEVVVIGQT 221
D F+ E AG+G+FG V G +++ +VA+KK+ D F++ E + ++ V+
Sbjct: 23 DRFQVERMAGQGTFGTVQLG---KEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVL--- 76
Query: 222 HHKNLVRL------LGFCDEGQNRL-LVYEFLNNGTLA----SFLFGNLKPSWNLRTNIA 270
HH N+V+L LG D L +V E++ + TL ++ + P L
Sbjct: 77 HHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFL 135
Query: 271 FQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNA-RISDFGLAKLLTLNQSKTIKTAI 329
FQ+ R + LH S + H DIKP N+L+++ ++ DFG AK L+ ++ A
Sbjct: 136 FQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEP---NVAY 191
Query: 330 RGTKGYVAPEW-YRKSTITAKVDVYSFGVLLLEII 363
++ Y APE + T VD++S G + E++
Sbjct: 192 ICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMM 226
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + S A+K LD+ K+ + NE ++ + LV+L
Sbjct: 50 GTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E++ G + S L + S A QI YLH S +I
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+L+D +++DFG AK + K + GT Y+APE
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 99/242 (40%), Gaps = 53/242 (21%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKE---FKNEVVVIGQTHH 223
+ K G+GS+G+V + IE + A+ + +++ Q K+ K EV ++ + HH
Sbjct: 29 HLKGAIGQGSYGVV-RVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHH 87
Query: 224 KNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL---------------------------- 255
N+ RL ++ Q LV E + G L L
Sbjct: 88 PNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNE 147
Query: 256 ------FGNLKPSWN------LRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILL--D 301
+ S + L +NI QI L YLH + I H DIKP+N L +
Sbjct: 148 EAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH---NQGICHRDIKPENFLFSTN 204
Query: 302 DHYNARISDFGLAK-LLTLNQSKTI-KTAIRGTKGYVAPEWYRKS--TITAKVDVYSFGV 357
+ ++ DFGL+K LN + T GT +VAPE + + K D +S GV
Sbjct: 205 KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGV 264
Query: 358 LL 359
LL
Sbjct: 265 LL 266
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 15/165 (9%)
Query: 212 KNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF 271
+ E+ ++ + +H ++++ F D ++ +V E + G L + GN + +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 272 QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYN---ARISDFGLAKLLTLNQSKTIKTA 328
Q+ + YLHE+ IIH D+KP+N+LL +I+DFG +K+ L ++ ++T
Sbjct: 122 QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT- 175
Query: 329 IRGTKGYVAPEWYRKSTITA----KVDVYSFGVLLLEIISCRKSF 369
+ GT Y+APE S TA VD +S GV+L +S F
Sbjct: 176 LCGTPTYLAPEVLV-SVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 15/165 (9%)
Query: 212 KNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF 271
+ E+ ++ + +H ++++ F D ++ +V E + G L + GN + +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 272 QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYN---ARISDFGLAKLLTLNQSKTIKTA 328
Q+ + YLHE+ IIH D+KP+N+LL +I+DFG +K+ L ++ ++T
Sbjct: 122 QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT- 175
Query: 329 IRGTKGYVAPEWYRKSTITA----KVDVYSFGVLLLEIISCRKSF 369
+ GT Y+APE S TA VD +S GV+L +S F
Sbjct: 176 LCGTPTYLAPEVLV-SVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 15/165 (9%)
Query: 212 KNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF 271
+ E+ ++ + +H ++++ F D ++ +V E + G L + GN + +
Sbjct: 69 ETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 127
Query: 272 QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYN---ARISDFGLAKLLTLNQSKTIKTA 328
Q+ + YLHE+ IIH D+KP+N+LL +I+DFG +K+ L ++ ++T
Sbjct: 128 QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT- 181
Query: 329 IRGTKGYVAPEWYRKSTITA----KVDVYSFGVLLLEIISCRKSF 369
+ GT Y+APE S TA VD +S GV+L +S F
Sbjct: 182 LCGTPTYLAPEVLV-SVGTAGYNRAVDCWSLGVILFICLSGYPPF 225
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 15/165 (9%)
Query: 212 KNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF 271
+ E+ ++ + +H ++++ F D ++ +V E + G L + GN + +
Sbjct: 62 ETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 120
Query: 272 QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYN---ARISDFGLAKLLTLNQSKTIKTA 328
Q+ + YLHE+ IIH D+KP+N+LL +I+DFG +K+ L ++ ++T
Sbjct: 121 QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT- 174
Query: 329 IRGTKGYVAPEWYRKSTITA----KVDVYSFGVLLLEIISCRKSF 369
+ GT Y+APE S TA VD +S GV+L +S F
Sbjct: 175 LCGTPTYLAPEVL-VSVGTAGYNRAVDCWSLGVILFICLSGYPPF 218
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 15/165 (9%)
Query: 212 KNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF 271
+ E+ ++ + +H ++++ F D ++ +V E + G L + GN + +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 272 QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYN---ARISDFGLAKLLTLNQSKTIKTA 328
Q+ + YLHE+ IIH D+KP+N+LL +I+DFG +K+ L ++ ++T
Sbjct: 122 QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT- 175
Query: 329 IRGTKGYVAPEWYRKSTITA----KVDVYSFGVLLLEIISCRKSF 369
+ GT Y+APE S TA VD +S GV+L +S F
Sbjct: 176 LCGTPTYLAPEVLV-SVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 13/201 (6%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDR---VFQDGEKEFKNEVVVIGQTHHKNLVRL 229
G+G+FG V ++ + + A+K L + + +D E V+ T H L
Sbjct: 14 GKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT-A 69
Query: 230 LGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQI 288
L + + +RL V E+ N G L L + +I L YLH S +
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRDV 126
Query: 289 IHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITA 348
++ DIK +N++LD + +I+DFGL K ++ T+KT GT Y+APE +
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFC-GTPEYLAPEVLEDNDYGR 184
Query: 349 KVDVYSFGVLLLEIISCRKSF 369
VD + GV++ E++ R F
Sbjct: 185 AVDWWGLGVVMYEMMCGRLPF 205
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 15/165 (9%)
Query: 212 KNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF 271
+ E+ ++ + +H ++++ F D ++ +V E + G L + GN + +
Sbjct: 188 ETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 246
Query: 272 QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYN---ARISDFGLAKLLTLNQSKTIKTA 328
Q+ + YLHE+ IIH D+KP+N+LL +I+DFG +K+ L ++ ++T
Sbjct: 247 QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT- 300
Query: 329 IRGTKGYVAPEWYRKSTITA----KVDVYSFGVLLLEIISCRKSF 369
+ GT Y+APE S TA VD +S GV+L +S F
Sbjct: 301 LCGTPTYLAPE-VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 344
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 101/220 (45%), Gaps = 32/220 (14%)
Query: 171 EAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVV----VIGQTHH-KN 225
E G G+ G V+K R + +AVK++ R G KE ++ V+ ++H
Sbjct: 32 EMGSGTCGQVWKMRF---RKTGHVIAVKQMRR---SGNKEENKRILMDLDVVLKSHDCPY 85
Query: 226 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARGLLYLHED 283
+V+ G + + E + GT A L ++ R + I + L YL E
Sbjct: 86 IVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKE- 142
Query: 284 CSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRK 343
+IH D+KP NILLD+ ++ DFG++ L +++K ++A G Y+APE
Sbjct: 143 -KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKD-RSA--GCAAYMAPERIDP 198
Query: 344 STITA-----KVDVYSFGVLLLEIIS-------CRKSFDI 371
T + DV+S G+ L+E+ + C+ F++
Sbjct: 199 PDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEV 238
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 13/201 (6%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDR---VFQDGEKEFKNEVVVIGQTHHKNLVRL 229
G+G+FG K ++ + + A+K L + + +D E V+ T H L
Sbjct: 14 GKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT-A 69
Query: 230 LGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQI 288
L + + +RL V E+ N G L L + +I L YLH S +
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRDV 126
Query: 289 IHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITA 348
++ DIK +N++LD + +I+DFGL K ++ T+KT GT Y+APE +
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFC-GTPEYLAPEVLEDNDYGR 184
Query: 349 KVDVYSFGVLLLEIISCRKSF 369
VD + GV++ E++ R F
Sbjct: 185 AVDWWGLGVVMYEMMCGRLPF 205
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 13/201 (6%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDR---VFQDGEKEFKNEVVVIGQTHHKNLVRL 229
G+G+FG K ++ + + A+K L + + +D E V+ T H L
Sbjct: 17 GKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT-A 72
Query: 230 LGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQI 288
L + + +RL V E+ N G L L + +I L YLH S +
Sbjct: 73 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRDV 129
Query: 289 IHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITA 348
++ DIK +N++LD + +I+DFGL K ++ T+KT GT Y+APE +
Sbjct: 130 VYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFC-GTPEYLAPEVLEDNDYGR 187
Query: 349 KVDVYSFGVLLLEIISCRKSF 369
VD + GV++ E++ R F
Sbjct: 188 AVDWWGLGVVMYEMMCGRLPF 208
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 104/246 (42%), Gaps = 36/246 (14%)
Query: 130 GFFFIYKKKWIRNSPGDGTVETNLRCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTR 189
GF+ Y+ K I G G RC +E + G GSF
Sbjct: 14 GFYENYEPKEIL---GRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSF------------ 58
Query: 190 TSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNG 249
+A V++L E K ++ + H N+++L + LV++ + G
Sbjct: 59 ---SAEEVQELR------EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKG 109
Query: 250 TLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARIS 309
L +L + S I + + LH+ I+H D+KP+NILLDD N +++
Sbjct: 110 ELFDYLTEKVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLT 166
Query: 310 DFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKST------ITAKVDVYSFGVLLLEII 363
DFG + L+ + ++ ++ GT Y+APE S +VD++S GV++ ++
Sbjct: 167 DFGFS--CQLDPGEKLR-SVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLL 223
Query: 364 SCRKSF 369
+ F
Sbjct: 224 AGSPPF 229
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 128/294 (43%), Gaps = 37/294 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLL 230
G GS+G V K V+++ AV + K ++ +GE K E+ ++ + HKN+++L+
Sbjct: 14 GEGSYGKV-KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLV 72
Query: 231 G--FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIARGLLYLHEDCSS 286
+ +E Q +V E+ G + L + + + + Q+ GL YLH S
Sbjct: 73 DVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH---SQ 128
Query: 287 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRK-ST 345
I+H DIKP N+LL +IS G+A+ L + +G+ + PE T
Sbjct: 129 GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDT 188
Query: 346 ITA-KVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN-GKLDDLVEGDMEA 403
+ KVD++S GV L I + F+ D + + N GK + GD
Sbjct: 189 FSGFKVDIWSAGVTLYNITTGLYPFE----------GDNIYKLFENIGKGSYAIPGD--- 235
Query: 404 MNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQM-----LEGVVEVDVPPNPSP 452
C L + ++ +P+ R ++R++ Q E VP PSP
Sbjct: 236 -----CGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPVPIPPSP 284
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 112/268 (41%), Gaps = 34/268 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+G F ++ T+ V K + ++ E+ + H+++V GF
Sbjct: 24 GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 83
Query: 233 CDEGQNRLLVYEFLNNGTLASF-----LFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
++ +V E +L + + LR QI G YLH + +
Sbjct: 84 FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-----QIVLGCQYLHRN---R 135
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
+IH D+K N+ L++ +I DFGLA + + + K + GT Y+APE K +
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCGTPNYIAPEVLSKKGHS 193
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIE-MGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMND 406
+VDV+S G ++ ++ + F+ + E Y + + ++ ++ + ++ M
Sbjct: 194 FEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH--INPVAASLIQKM-- 249
Query: 407 IKCVEKLLMVSIWCIQEDPSLRPTMRKV 434
+Q DP+ RPT+ ++
Sbjct: 250 --------------LQTDPTARPTINEL 263
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 25/217 (11%)
Query: 169 KEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLD----------RVFQDGEKEFKNEVVVI 218
KE GRG +V + + + + AVK +D V + E K ++
Sbjct: 9 KEILGRGVSSVVRRCI---HKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 65
Query: 219 GQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLL 278
+ H N+++L + LV++ + G L +L + S I + +
Sbjct: 66 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 125
Query: 279 YLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAP 338
LH+ I+H D+KP+NILLDD N +++DFG + L+ + ++ + GT Y+AP
Sbjct: 126 ALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPGEKLR-EVCGTPSYLAP 179
Query: 339 EWYRKST------ITAKVDVYSFGVLLLEIISCRKSF 369
E S +VD++S GV++ +++ F
Sbjct: 180 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + + A+K LD+ K+ + NE ++ + LV+L
Sbjct: 50 GTGSFGRV---MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E++ G + S L + S A QI YLH S +I
Sbjct: 107 EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+L+D +++DFG AK + K + GT Y+APE
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + A+K LD+ KE + NE ++ + LV+L
Sbjct: 50 GTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKL 106
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E+ G + S L + S A QI YLH S +I
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+++D +++DFGLAK + K + GT Y+APE
Sbjct: 164 YRDLKPENLMIDQQGYIKVTDFGLAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + + A+K LD+ K+ + NE ++ + LV+L
Sbjct: 50 GTGSFGRV---MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E++ G + S L + S A QI YLH S +I
Sbjct: 107 EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+L+D +++DFG AK + K + GT Y+APE
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + + A+K LD+ K+ + NE ++ + LV+L
Sbjct: 50 GTGSFGRV---MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E++ G + S L + S A QI YLH S +I
Sbjct: 107 EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+L+D +++DFG AK + K + GT Y+APE
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 112/268 (41%), Gaps = 34/268 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+G F ++ T+ V K + ++ E+ + H+++V GF
Sbjct: 26 GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 85
Query: 233 CDEGQNRLLVYEFLNNGTLASF-----LFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
++ +V E +L + + LR QI G YLH + +
Sbjct: 86 FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-----QIVLGCQYLHRN---R 137
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
+IH D+K N+ L++ +I DFGLA + + + K + GT Y+APE K +
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKTLCGTPNYIAPEVLSKKGHS 195
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIE-MGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMND 406
+VDV+S G ++ ++ + F+ + E Y + + ++ ++ + ++ M
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH--INPVAASLIQKM-- 251
Query: 407 IKCVEKLLMVSIWCIQEDPSLRPTMRKV 434
+Q DP+ RPT+ ++
Sbjct: 252 --------------LQTDPTARPTINEL 265
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 15/165 (9%)
Query: 212 KNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF 271
+ E+ ++ + +H ++++ F D ++ +V E + G L + GN + +
Sbjct: 202 ETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 260
Query: 272 QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYN---ARISDFGLAKLLTLNQSKTIKTA 328
Q+ + YLHE+ IIH D+KP+N+LL +I+DFG +K+ L ++ ++T
Sbjct: 261 QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT- 314
Query: 329 IRGTKGYVAPEWYRKSTITA----KVDVYSFGVLLLEIISCRKSF 369
+ GT Y+APE S TA VD +S GV+L +S F
Sbjct: 315 LCGTPTYLAPE-VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 358
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + + A+K LD+ K+ + NE ++ + LV+L
Sbjct: 43 GTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 99
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E++ G + S L + S A QI YLH S +I
Sbjct: 100 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 156
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+L+D +++DFG AK + K + GT Y+APE
Sbjct: 157 YRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 211
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 212 VDWWALGVLIYEMAAGYPPF 231
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + + A+K LD+ K+ + NE ++ + LV+L
Sbjct: 51 GTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E++ G + S L + S A QI YLH S +I
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 164
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+L+D +++DFG AK + K + GT Y+APE
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 220 VDWWALGVLIYEMAAGYPPF 239
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + + A+K LD+ K+ + NE ++ + LV+L
Sbjct: 51 GTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E++ G + S L + S A QI YLH S +I
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 164
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+L+D +++DFG AK + K + GT Y+APE
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 220 VDWWALGVLIYEMAAGYPPF 239
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 112/268 (41%), Gaps = 34/268 (12%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+G F ++ T+ V K + ++ E+ + H+++V GF
Sbjct: 26 GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 85
Query: 233 CDEGQNRLLVYEFLNNGTLASF-----LFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
++ +V E +L + + LR QI G YLH + +
Sbjct: 86 FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-----QIVLGCQYLHRN---R 137
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
+IH D+K N+ L++ +I DFGLA + + + K + GT Y+APE K +
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKTLCGTPNYIAPEVLSKKGHS 195
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIE-MGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMND 406
+VDV+S G ++ ++ + F+ + E Y + + ++ ++ + ++ M
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH--INPVAASLIQKM-- 251
Query: 407 IKCVEKLLMVSIWCIQEDPSLRPTMRKV 434
+Q DP+ RPT+ ++
Sbjct: 252 --------------LQTDPTARPTINEL 265
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 113/270 (41%), Gaps = 38/270 (14%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+G F ++ T+ V K + ++ E+ + H+++V GF
Sbjct: 50 GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 109
Query: 233 CDEGQNRLLVYEFLNNGTLASF-----LFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
++ +V E +L + + LR QI G YLH + +
Sbjct: 110 FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-----QIVLGCQYLHRN---R 161
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
+IH D+K N+ L++ +I DFGLA + + + K + GT Y+APE K +
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCGTPNYIAPEVLSKKGHS 219
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIE-MGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMND 406
+VDV+S G ++ ++ + F+ + E Y + + ++ +N
Sbjct: 220 FEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH-------------INP 266
Query: 407 IKC--VEKLLMVSIWCIQEDPSLRPTMRKV 434
+ ++K+L Q DP+ RPT+ ++
Sbjct: 267 VAASLIQKML-------QTDPTARPTINEL 289
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 113/270 (41%), Gaps = 38/270 (14%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+G F ++ T+ V K + ++ E+ + H+++V GF
Sbjct: 48 GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 107
Query: 233 CDEGQNRLLVYEFLNNGTLASF-----LFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
++ +V E +L + + LR QI G YLH + +
Sbjct: 108 FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-----QIVLGCQYLHRN---R 159
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
+IH D+K N+ L++ +I DFGLA + + + K + GT Y+APE K +
Sbjct: 160 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCGTPNYIAPEVLSKKGHS 217
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIE-MGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMND 406
+VDV+S G ++ ++ + F+ + E Y + + ++ +N
Sbjct: 218 FEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH-------------INP 264
Query: 407 IKC--VEKLLMVSIWCIQEDPSLRPTMRKV 434
+ ++K+L Q DP+ RPT+ ++
Sbjct: 265 VAASLIQKML-------QTDPTARPTINEL 287
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + + A+K LD+ K+ + NE ++ + LV+L
Sbjct: 51 GTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E++ G + S L + S A QI YLH S +I
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 164
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+L+D +++DFG AK + K + GT Y+APE
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 220 VDWWALGVLIYEMAAGYPPF 239
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 113/270 (41%), Gaps = 38/270 (14%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
G+G F ++ T+ V K + ++ E+ + H+++V GF
Sbjct: 30 GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 89
Query: 233 CDEGQNRLLVYEFLNNGTLASF-----LFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
++ +V E +L + + LR QI G YLH + +
Sbjct: 90 FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-----QIVLGCQYLHRN---R 141
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTIT 347
+IH D+K N+ L++ +I DFGLA + + + K + GT Y+APE K +
Sbjct: 142 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKTLCGTPNYIAPEVLSKKGHS 199
Query: 348 AKVDVYSFGVLLLEIISCRKSFDIE-MGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMND 406
+VDV+S G ++ ++ + F+ + E Y + + ++ +N
Sbjct: 200 FEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH-------------INP 246
Query: 407 IKC--VEKLLMVSIWCIQEDPSLRPTMRKV 434
+ ++K+L Q DP+ RPT+ ++
Sbjct: 247 VAASLIQKML-------QTDPTARPTINEL 269
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + S A+K LD+ K+ + NE ++ + LV+L
Sbjct: 50 GTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E++ G + S L + + A QI YLH S +I
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+L+D +++DFG AK + K + GT Y+APE
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 65/125 (52%), Gaps = 17/125 (13%)
Query: 268 NIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQS-KTIK 326
+I QIA + +LH S ++H D+KP NI ++ DFGL + ++ +T+
Sbjct: 168 HIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 224
Query: 327 TAIR---------GTKGYVAPEWYRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY 377
T + GTK Y++PE + + KVD++S G++L E++ SF +M E
Sbjct: 225 TPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLY---SFSTQM-ERV 280
Query: 378 AILTD 382
I+TD
Sbjct: 281 RIITD 285
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + A+K LD+ KE + NE ++ + LV+L
Sbjct: 50 GTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKL 106
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E+ G + S L + S A QI YLH S +I
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+++D +++DFGLAK + K + GT Y+APE
Sbjct: 164 YRDLKPENLMIDQQGYIQVTDFGLAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + + A+K LD+ K+ + NE ++ + LV+L
Sbjct: 71 GTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 127
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E++ G + S L + S A QI YLH S +I
Sbjct: 128 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 184
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+L+D +++DFG AK + K + GT Y+APE
Sbjct: 185 YRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 239
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 240 VDWWALGVLIYEMAAGYPPF 259
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + S A+K LD+ K+ + NE ++ + LV+L
Sbjct: 50 GTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E++ G + S L + S A QI YLH S +I
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+L+D +++DFG AK + K + GT Y+APE
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ ++ + F
Sbjct: 219 VDWWALGVLIYQMAAGYPPF 238
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 18/206 (8%)
Query: 171 EAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKE--FKNEVVVIGQTHHKNLVR 228
E GRG++G V K V + S +AVK++ + E++ + VV+ + +V+
Sbjct: 29 EIGRGAYGSVNKMV---HKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQ 85
Query: 229 LLGFCDEGQNRLLVYEFLNNG--TLASFLFGNLKP--SWNLRTNIAFQIARGLLYLHEDC 284
G + + E ++ +++ L + I + L +L E+
Sbjct: 86 FYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL 145
Query: 285 SSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKS 344
+IIH DIKP NILLD N ++ DFG++ L + +KT G + Y+APE S
Sbjct: 146 --KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDA---GCRPYMAPERIDPS 200
Query: 345 T----ITAKVDVYSFGVLLLEIISCR 366
+ DV+S G+ L E+ + R
Sbjct: 201 ASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + A+K LD+ K+ + NE ++ + LV+L
Sbjct: 50 GTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E++ G + S L + S A QI YLH S +I
Sbjct: 107 EFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+L+D +++DFG AK + K + GT Y+APE
Sbjct: 164 YRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 103/246 (41%), Gaps = 36/246 (14%)
Query: 130 GFFFIYKKKWIRNSPGDGTVETNLRCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTR 189
GF+ Y+ K I G G RC +E + G GSF
Sbjct: 14 GFYENYEPKEIL---GRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSF------------ 58
Query: 190 TSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNG 249
+A V++L E K ++ + H N+++L + LV++ + G
Sbjct: 59 ---SAEEVQELR------EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKG 109
Query: 250 TLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARIS 309
L +L + S I + + LH+ I+H D+KP+NILLDD N +++
Sbjct: 110 ELFDYLTEKVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLT 166
Query: 310 DFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKST------ITAKVDVYSFGVLLLEII 363
DFG + L+ + ++ + GT Y+APE S +VD++S GV++ ++
Sbjct: 167 DFGFS--CQLDPGEKLR-EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLL 223
Query: 364 SCRKSF 369
+ F
Sbjct: 224 AGSPPF 229
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 112/272 (41%), Gaps = 40/272 (14%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE----KEFKNEVVVIGQTHH--KNL 226
G G FG VY G+ + V+K DR+ GE EVV++ + +
Sbjct: 17 GSGGFGSVYSGIRVSDNLPVAIKHVEK-DRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 227 VRLLGFCDEGQNRLLVYEFLNN-GTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 285
+RLL + + + +L+ E + L F+ L + +Q+ + + H +C
Sbjct: 76 IRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-NCG 134
Query: 286 SQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKS 344
++H DIK +NIL+D + ++ DFG LL T+ T GT+ Y PEW R
Sbjct: 135 --VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYH 188
Query: 345 TITAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEA 403
+ V+S G+LL +++ DI + I+ F R E
Sbjct: 189 RYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVSS---------EC 235
Query: 404 MNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVS 435
+ I+ WC+ PS RPT ++
Sbjct: 236 QHLIR----------WCLALRPSDRPTFEEIQ 257
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + S A+K LD+ K+ + NE ++ + LV+L
Sbjct: 50 GTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E++ G + S L + S A QI YLH S +I
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+++D +++DFG AK + K + GT Y+APE
Sbjct: 164 YRDLKPENLIIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIIISKGYNKA 218
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 95/229 (41%), Gaps = 33/229 (14%)
Query: 160 ALEEATDNFKE--EAGRGSFGIVYK------GVIETTRTSTTAVAVKKLDRVFQDGEKEF 211
++E D+ + E GRG++G+V K G I + V ++ R+ D +
Sbjct: 1 SMEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISM 60
Query: 212 KNEVVVIGQTHHKNLVR------LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNL 265
+ T + L R + D ++ T+ + G
Sbjct: 61 RTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGK------- 113
Query: 266 RTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTI 325
IA I + L +LH S +IH D+KP N+L++ ++ DFG++ L + +K I
Sbjct: 114 ---IAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDI 168
Query: 326 KTAIRGTKGYVAPEW----YRKSTITAKVDVYSFGVLLLEIISCRKSFD 370
G K Y+APE + + K D++S G+ ++E+ R +D
Sbjct: 169 DA---GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYD 214
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + A+K LD+ K+ + NE ++ + LV+L
Sbjct: 50 GTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E++ G + S L + S A QI YLH S +I
Sbjct: 107 EFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+L+D +++DFG AK + K + GT Y+APE
Sbjct: 164 YRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 89/196 (45%), Gaps = 19/196 (9%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK---EFKNEVVVIGQTHHKNL 226
++ G G+FG+ + + S VAVK ++R GEK K E++ H N+
Sbjct: 25 KDIGSGNFGVAR---LMRDKQSNELVAVKYIER----GEKIAANVKREIINHRSLRHPNI 77
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSS 286
VR + +V E+ + G L + + S + Q+ G+ Y H +
Sbjct: 78 VRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCH---AM 134
Query: 287 QIIHCDIKPQNILLDDHYNAR--ISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKS 344
Q+ H D+K +N LLD R I DFG +K L+ K+ + GT Y+APE K
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP--KSTV-GTPAYIAPEVLLKK 191
Query: 345 TITAKV-DVYSFGVLL 359
KV DV+S GV L
Sbjct: 192 EYDGKVADVWSCGVTL 207
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 89/196 (45%), Gaps = 19/196 (9%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK---EFKNEVVVIGQTHHKNL 226
++ G G+FG+ + + S VAVK ++R GEK K E++ H N+
Sbjct: 24 KDIGSGNFGVAR---LMRDKQSNELVAVKYIER----GEKIDENVKREIINHRSLRHPNI 76
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSS 286
VR + +V E+ + G L + + S + Q+ G+ Y H +
Sbjct: 77 VRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCH---AM 133
Query: 287 QIIHCDIKPQNILLDDHYNAR--ISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKS 344
Q+ H D+K +N LLD R I DFG +K L+ K+ + GT Y+APE K
Sbjct: 134 QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP--KSTV-GTPAYIAPEVLLKK 190
Query: 345 TITAKV-DVYSFGVLL 359
KV DV+S GV L
Sbjct: 191 EYDGKVADVWSCGVTL 206
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 124/294 (42%), Gaps = 56/294 (19%)
Query: 173 GRGSFG-IVYKGVIETTRTSTTAVAVKKLDRVFQD-GEKEFKNEVVVIGQTHHKNLVRLL 230
G GS G +V++G + VAVK++ F D E K ++ H N++R
Sbjct: 24 GYGSSGTVVFQGSFQGR-----PVAVKRMLIDFCDIALMEIK---LLTESDDHPNVIRY- 74
Query: 231 GFCDEGQNRLLVYEF-LNNGTLASFLFGNLKPSWNLRTNIAF-------QIARGLLYLHE 282
+C E +R L L N L + NL+ + QIA G+ +LH
Sbjct: 75 -YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH- 132
Query: 283 DCSSQIIHCDIKPQNILL--------DDHYNAR-----ISDFGLAKLLTLNQS--KTIKT 327
S +IIH D+KPQNIL+ D A ISDFGL K L Q +
Sbjct: 133 --SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 190
Query: 328 AIRGTKGYVAPEWYRKST-------ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 380
GT G+ APE +S +T +D++S G + I+S K G++Y+
Sbjct: 191 NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH---PFGDKYSRE 247
Query: 381 TDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKV 434
++ + LD +M+ ++D + + + I DP RPT KV
Sbjct: 248 SNIIRGIF---SLD-----EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 293
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + S A+K LD+ K+ + NE ++ + LV+L
Sbjct: 50 GTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E++ G + S L + A QI YLH S +I
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+L+D +++DFG AK + K + GT Y+APE
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + S A+K LD+ K+ + NE ++ + LV+L
Sbjct: 71 GTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 127
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E++ G + S L + A QI YLH S +I
Sbjct: 128 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLI 184
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+L+D +++DFG AK + K + GT Y+APE
Sbjct: 185 YRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 239
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 240 VDWWALGVLIYEMAAGYPPF 259
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 92/201 (45%), Gaps = 13/201 (6%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDR---VFQDGEKEFKNEVVVIGQTHHKNLVRL 229
G+G+FG V ++ + + A+K L + + +D E V+ T H L
Sbjct: 19 GKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT-A 74
Query: 230 LGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQI 288
L + + +RL V E+ N G L L + +I L YLH S +
Sbjct: 75 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRDV 131
Query: 289 IHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITA 348
++ DIK +N++LD + +I+DFGL K ++ T+K GT Y+APE +
Sbjct: 132 VYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFC-GTPEYLAPEVLEDNDYGR 189
Query: 349 KVDVYSFGVLLLEIISCRKSF 369
VD + GV++ E++ R F
Sbjct: 190 AVDWWGLGVVMYEMMCGRLPF 210
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + S A+K LD+ K+ + NE ++ + LV+L
Sbjct: 50 GTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E++ G + S L + A QI YLH S +I
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+L+D +++DFG AK + K + GT Y+APE
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + A+K LD+ K+ + NE ++ + LV+L
Sbjct: 50 GTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E++ G + S L + S A QI YLH S +I
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+L+D +++DFG AK + K + GT Y+APE
Sbjct: 164 YRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + S A+K LD+ K+ + NE ++ + LV+L
Sbjct: 45 GTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 101
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E++ G + S L + A QI YLH S +I
Sbjct: 102 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLI 158
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+L+D +++DFG AK + K + GT Y+APE
Sbjct: 159 YRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 213
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 214 VDWWALGVLIYEMAAGYPPF 233
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 20/203 (9%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + S A+K LD+ K+ + NE ++ + LV+L
Sbjct: 50 GTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFL--FGNL-KPSWNLRTNIAFQIARGLLYLHEDCSS 286
+ N +V E++ G + S L G +P A QI YLH S
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF---YAAQIVLTFEYLH---SL 160
Query: 287 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTI 346
+I+ D+KP+N+L+D +++DFG AK + K + GT Y+APE
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 347 TAKVDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 114/262 (43%), Gaps = 40/262 (15%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKN--EVVVIGQTHHK 224
K G G++G+V T + + VA+KK++ F + E+ ++ H+
Sbjct: 14 QLKSLLGEGAYGVVCSA---THKPTGEIVAIKKIE-PFDKPLFALRTLREIKILKHFKHE 69
Query: 225 NLVRLLGFCD----EGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 280
N++ + E N + + + L L + + +++ I +Q R + L
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI-YQTLRAVKVL 128
Query: 281 HEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKG----YV 336
H S +IH D+KP N+L++ + + ++ DFGLA++ +++S + G + +V
Sbjct: 129 H---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARI--IDESAADNSEPTGQQSGMVEFV 183
Query: 337 APEWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR 389
A WYR + + +DV+S G +L E+ R F G +Y F
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP---GRDYRHQLLLIFG--- 237
Query: 390 NGKLDDLVEGDMEAMNDIKCVE 411
+ G + ND++C+E
Sbjct: 238 -------IIGTPHSDNDLRCIE 252
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 92/201 (45%), Gaps = 13/201 (6%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDR---VFQDGEKEFKNEVVVIGQTHHKNLVRL 229
G+G+FG K ++ + + A+K L + + +D E V+ T H L
Sbjct: 14 GKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT-A 69
Query: 230 LGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQI 288
L + + +RL V E+ N G L L + +I L YLH S +
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRDV 126
Query: 289 IHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITA 348
++ DIK +N++LD + +I+DFGL K ++ T+K GT Y+APE +
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFC-GTPEYLAPEVLEDNDYGR 184
Query: 349 KVDVYSFGVLLLEIISCRKSF 369
VD + GV++ E++ R F
Sbjct: 185 AVDWWGLGVVMYEMMCGRLPF 205
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + A+K LD+ K+ + NE ++ + LV+L
Sbjct: 51 GTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E++ G + S L + S A QI YLH S +I
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 164
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+L+D +++DFG AK + K + GT Y+APE
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEYLAPEIILSKGYNKA 219
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 220 VDWWALGVLIYEMAAGYPPF 239
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 123/307 (40%), Gaps = 46/307 (14%)
Query: 140 IRNSPGDGTVETNLRCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKK 199
+R +P + T L K E+ G G FG VY G+ + V+K
Sbjct: 27 LRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK 86
Query: 200 LDRVFQDGE----KEFKNEVVVIGQTHH--KNLVRLLGFCDEGQNRLLVYEFLNNGTLAS 253
DR+ GE EVV++ + ++RLL + + + +L+ L
Sbjct: 87 -DRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQ 142
Query: 254 FLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSSQIIHCDIKPQNILLD-DHYNARI 308
LF + L+ +A +Q+ + + H +C ++H DIK +NIL+D + ++
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKL 199
Query: 309 SDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK-VDVYSFGVLLLEIISCRK 367
DFG LL T+ T GT+ Y PEW R + V+S G+LL +++
Sbjct: 200 IDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG-- 253
Query: 368 SFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSL 427
DI + I+ F R E + I+ WC+ PS
Sbjct: 254 --DIPFEHDEEIIRGQVFFRQRVSS---------ECQHLIR----------WCLALRPSD 292
Query: 428 RPTMRKV 434
RPT ++
Sbjct: 293 RPTFEEI 299
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + A+K LD+ K+ + NE ++ + LV+L
Sbjct: 36 GTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 92
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E++ G + S L + S A QI YLH S +I
Sbjct: 93 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 149
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+L+D +++DFG AK + K + GT Y+APE
Sbjct: 150 YRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEYLAPEIILSKGYNKA 204
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 205 VDWWALGVLIYEMAAGYPPF 224
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 39/218 (17%)
Query: 175 GSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE-----------KEFKNEVVVIGQTHH 223
GS+G V GV + VA+K++ DG K E+ ++ HH
Sbjct: 33 GSYGAVCAGV----DSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 224 KNLVRL----LGFCDEGQNRLLVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLL 278
N++ L + F + ++L + L LA + + S + I GL
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLH 148
Query: 279 YLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAP 338
LHE + ++H D+ P NILL D+ + I DF LA+ T + +KT YV
Sbjct: 149 VLHE---AGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKT---------HYVTH 196
Query: 339 EWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
WYR + T VD++S G ++ E+ + + F
Sbjct: 197 RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALF 234
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + + A+K LD+ K+ + NE ++ + LV+L
Sbjct: 51 GTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E+ G + S L + S A QI YLH S +I
Sbjct: 108 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 164
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+++D +++DFG AK + K + GT Y+APE
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 220 VDWWALGVLIYEMAAGYPPF 239
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 123/307 (40%), Gaps = 46/307 (14%)
Query: 140 IRNSPGDGTVETNLRCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKK 199
+R +P + T L K E+ G G FG VY G+ + V+K
Sbjct: 12 LRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK 71
Query: 200 LDRVFQDGE----KEFKNEVVVIGQTHH--KNLVRLLGFCDEGQNRLLVYEFLNNGTLAS 253
DR+ GE EVV++ + ++RLL + + + +L+ L
Sbjct: 72 -DRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQ 127
Query: 254 FLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSSQIIHCDIKPQNILLD-DHYNARI 308
LF + L+ +A +Q+ + + H +C ++H DIK +NIL+D + ++
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKL 184
Query: 309 SDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK-VDVYSFGVLLLEIISCRK 367
DFG LL T+ T GT+ Y PEW R + V+S G+LL +++
Sbjct: 185 IDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG-- 238
Query: 368 SFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSL 427
DI + I+ F R E + I+ WC+ PS
Sbjct: 239 --DIPFEHDEEIIRGQVFFRQRVSS---------ECQHLIR----------WCLALRPSD 277
Query: 428 RPTMRKV 434
RPT ++
Sbjct: 278 RPTFEEI 284
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 39/218 (17%)
Query: 175 GSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE-----------KEFKNEVVVIGQTHH 223
GS+G V GV + VA+K++ DG K E+ ++ HH
Sbjct: 33 GSYGAVCAGV----DSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 224 KNLVRL----LGFCDEGQNRLLVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLL 278
N++ L + F + ++L + L LA + + S + I GL
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLH 148
Query: 279 YLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAP 338
LHE + ++H D+ P NILL D+ + I DF LA+ T + +KT YV
Sbjct: 149 VLHE---AGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKT---------HYVTH 196
Query: 339 EWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSF 369
WYR + T VD++S G ++ E+ + + F
Sbjct: 197 RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALF 234
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 123/307 (40%), Gaps = 46/307 (14%)
Query: 140 IRNSPGDGTVETNLRCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKK 199
+R +P + T L K E+ G G FG VY G+ + V+K
Sbjct: 12 LRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK 71
Query: 200 LDRVFQDGE----KEFKNEVVVIGQTHH--KNLVRLLGFCDEGQNRLLVYEFLNNGTLAS 253
DR+ GE EVV++ + ++RLL + + + +L+ L
Sbjct: 72 -DRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQ 127
Query: 254 FLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSSQIIHCDIKPQNILLD-DHYNARI 308
LF + L+ +A +Q+ + + H +C ++H DIK +NIL+D + ++
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKL 184
Query: 309 SDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK-VDVYSFGVLLLEIISCRK 367
DFG LL T+ T GT+ Y PEW R + V+S G+LL +++
Sbjct: 185 IDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG-- 238
Query: 368 SFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSL 427
DI + I+ F R E + I+ WC+ PS
Sbjct: 239 --DIPFEHDEEIIGGQVFFRQRVSS---------ECQHLIR----------WCLALRPSD 277
Query: 428 RPTMRKV 434
RPT ++
Sbjct: 278 RPTFEEI 284
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 123/307 (40%), Gaps = 46/307 (14%)
Query: 140 IRNSPGDGTVETNLRCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKK 199
+R +P + T L K E+ G G FG VY G+ + V+K
Sbjct: 13 LRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK 72
Query: 200 LDRVFQDGE----KEFKNEVVVIGQTHH--KNLVRLLGFCDEGQNRLLVYEFLNNGTLAS 253
DR+ GE EVV++ + ++RLL + + + +L+ L
Sbjct: 73 -DRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQ 128
Query: 254 FLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSSQIIHCDIKPQNILLD-DHYNARI 308
LF + L+ +A +Q+ + + H +C ++H DIK +NIL+D + ++
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKL 185
Query: 309 SDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK-VDVYSFGVLLLEIISCRK 367
DFG LL T+ T GT+ Y PEW R + V+S G+LL +++
Sbjct: 186 IDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG-- 239
Query: 368 SFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSL 427
DI + I+ F R E + I+ WC+ PS
Sbjct: 240 --DIPFEHDEEIIGGQVFFRQRVSS---------ECQHLIR----------WCLALRPSD 278
Query: 428 RPTMRKV 434
RPT ++
Sbjct: 279 RPTFEEI 285
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 12/201 (5%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDR---VFQDGEKEFKNEVVVIGQTHHKNLVRL 229
G+G+FG V ++ + + A+K L + V +D E V+ + H L
Sbjct: 160 GKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT-A 215
Query: 230 LGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQI 288
L + + +RL V E+ N G L L S + +I L YLH + +
Sbjct: 216 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE--KNV 273
Query: 289 IHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITA 348
++ D+K +N++LD + +I+DFGL K + T+KT GT Y+APE +
Sbjct: 274 VYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTFC-GTPEYLAPEVLEDNDYGR 331
Query: 349 KVDVYSFGVLLLEIISCRKSF 369
VD + GV++ E++ R F
Sbjct: 332 AVDWWGLGVVMYEMMCGRLPF 352
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 123/308 (39%), Gaps = 46/308 (14%)
Query: 140 IRNSPGDGTVETNLRCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKK 199
+R +P + T L K E+ G G FG VY G+ + V+K
Sbjct: 27 LRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK 86
Query: 200 LDRVFQDGE----KEFKNEVVVIGQTHH--KNLVRLLGFCDEGQNRLLVYEFLNNGTLAS 253
DR+ GE EVV++ + ++RLL + + + +L+ E
Sbjct: 87 -DRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQ 142
Query: 254 FLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSSQIIHCDIKPQNILLD-DHYNARI 308
LF + L+ +A +Q+ + + H +C ++H DIK +NIL+D + ++
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKL 199
Query: 309 SDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK-VDVYSFGVLLLEIISCRK 367
DFG LL T+ T GT+ Y PEW R + V+S G+LL +++
Sbjct: 200 IDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG-- 253
Query: 368 SFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSL 427
DI + I+ F R E + I+ WC+ PS
Sbjct: 254 --DIPFEHDEEIIRGQVFFRQRVS---------XECQHLIR----------WCLALRPSD 292
Query: 428 RPTMRKVS 435
RPT ++
Sbjct: 293 RPTFEEIQ 300
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 123/307 (40%), Gaps = 46/307 (14%)
Query: 140 IRNSPGDGTVETNLRCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKK 199
+R +P + T L K E+ G G FG VY G+ + V+K
Sbjct: 12 LRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK 71
Query: 200 LDRVFQDGE----KEFKNEVVVIGQTHH--KNLVRLLGFCDEGQNRLLVYEFLNNGTLAS 253
DR+ GE EVV++ + ++RLL + + + +L+ L
Sbjct: 72 -DRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQ 127
Query: 254 FLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSSQIIHCDIKPQNILLD-DHYNARI 308
LF + L+ +A +Q+ + + H +C ++H DIK +NIL+D + ++
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKL 184
Query: 309 SDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK-VDVYSFGVLLLEIISCRK 367
DFG LL T+ T GT+ Y PEW R + V+S G+LL +++
Sbjct: 185 IDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG-- 238
Query: 368 SFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSL 427
DI + I+ F R E + I+ WC+ PS
Sbjct: 239 --DIPFEHDEEIIGGQVFFRQRVSS---------ECQHLIR----------WCLALRPSD 277
Query: 428 RPTMRKV 434
RPT ++
Sbjct: 278 RPTFEEI 284
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 123/307 (40%), Gaps = 46/307 (14%)
Query: 140 IRNSPGDGTVETNLRCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKK 199
+R +P + T L K E+ G G FG VY G+ + V+K
Sbjct: 13 LRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK 72
Query: 200 LDRVFQDGE----KEFKNEVVVIGQTHH--KNLVRLLGFCDEGQNRLLVYEFLNNGTLAS 253
DR+ GE EVV++ + ++RLL + + + +L+ L
Sbjct: 73 -DRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQ 128
Query: 254 FLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSSQIIHCDIKPQNILLD-DHYNARI 308
LF + L+ +A +Q+ + + H +C ++H DIK +NIL+D + ++
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKL 185
Query: 309 SDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK-VDVYSFGVLLLEIISCRK 367
DFG LL T+ T GT+ Y PEW R + V+S G+LL +++
Sbjct: 186 IDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG-- 239
Query: 368 SFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSL 427
DI + I+ F R E + I+ WC+ PS
Sbjct: 240 --DIPFEHDEEIIGGQVFFRQRVSS---------ECQHLIR----------WCLALRPSD 278
Query: 428 RPTMRKV 434
RPT ++
Sbjct: 279 RPTFEEI 285
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + A+K LD+ K+ + NE ++ + LV+L
Sbjct: 50 GTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E++ G + S L + S A QI YLH S +I
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+L+D +++DFG AK + K + GT Y+APE
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + A+K LD+ K+ + NE ++ + LV+L
Sbjct: 51 GTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E++ G + S L + S A QI YLH S +I
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 164
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+L+D +++DFG AK + K + GT Y+APE
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 220 VDWWALGVLIYEMAAGYPPF 239
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 15/198 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
GRG+FG V ++TR + K + + + F E ++ + +V+L
Sbjct: 83 GRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYA 142
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA-FQIARGLLYLHEDCSSQIIHC 291
+ + +V E++ G L NL ++++ A F A +L L S IH
Sbjct: 143 FQDDRYLYMVMEYMPGGDLV-----NLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHR 197
Query: 292 DIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIK--TAIRGTKGYVAPEWYRKS----T 345
D+KP N+LLD + +++DFG + +N+ ++ TA+ GT Y++PE +
Sbjct: 198 DVKPDNMLLDKSGHLKLADFGTC--MKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGY 254
Query: 346 ITAKVDVYSFGVLLLEII 363
+ D +S GV L E++
Sbjct: 255 YGRECDWWSVGVFLYEML 272
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + A+K LD+ K+ + NE ++ + LV+L
Sbjct: 50 GTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E++ G + S L + S A QI YLH S +I
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+L+D +++DFG AK + K + GT Y+APE
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + S A+K LD+ K+ + NE ++ + LV+L
Sbjct: 50 GTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E++ G + S L + S A QI YLH S +I
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+L+D +++DFG AK + K + GT Y+AP
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPAIILSKGYNKA 218
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 11/202 (5%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
GRG+FG V + ++ + K + + + F E ++ + +V+L
Sbjct: 84 GRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCA 143
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA-FQIARGLLYLHEDCSSQIIHC 291
+ + +V E++ G L NL ++++ A F A +L L S +IH
Sbjct: 144 FQDDKYLYMVMEYMPGGDLV-----NLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHR 198
Query: 292 DIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKST----IT 347
D+KP N+LLD H + +++DFG + TA+ GT Y++PE +
Sbjct: 199 DVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV-GTPDYISPEVLKSQGGDGYYG 257
Query: 348 AKVDVYSFGVLLLEIISCRKSF 369
+ D +S GV L E++ F
Sbjct: 258 RECDWWSVGVFLFEMLVGDTPF 279
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + A+K LD+ K+ + NE ++ + LV+L
Sbjct: 50 GTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E++ G + S L + S A QI YLH S +I
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+L+D +++DFG AK + K + GT Y+APE
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 123/307 (40%), Gaps = 46/307 (14%)
Query: 140 IRNSPGDGTVETNLRCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKK 199
+R +P + T L K E+ G G FG VY G+ + V+K
Sbjct: 13 LRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK 72
Query: 200 LDRVFQDGE----KEFKNEVVVIGQTHH--KNLVRLLGFCDEGQNRLLVYEFLNNGTLAS 253
DR+ GE EVV++ + ++RLL + + + +L+ L
Sbjct: 73 -DRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQ 128
Query: 254 FLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSSQIIHCDIKPQNILLD-DHYNARI 308
LF + L+ +A +Q+ + + H +C ++H DIK +NIL+D + ++
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKL 185
Query: 309 SDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK-VDVYSFGVLLLEIISCRK 367
DFG LL T+ T GT+ Y PEW R + V+S G+LL +++
Sbjct: 186 IDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG-- 239
Query: 368 SFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSL 427
DI + I+ F R E + I+ WC+ PS
Sbjct: 240 --DIPFEHDEEIIGGQVFFRQRVS---------XECQHLIR----------WCLALRPSD 278
Query: 428 RPTMRKV 434
RPT ++
Sbjct: 279 RPTFEEI 285
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 12/201 (5%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDR---VFQDGEKEFKNEVVVIGQTHHKNLVRL 229
G+G+FG V ++ + + A+K L + V +D E V+ + H L
Sbjct: 157 GKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT-A 212
Query: 230 LGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQI 288
L + + +RL V E+ N G L L S + +I L YLH + +
Sbjct: 213 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE--KNV 270
Query: 289 IHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITA 348
++ D+K +N++LD + +I+DFGL K + T+KT GT Y+APE +
Sbjct: 271 VYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTFC-GTPEYLAPEVLEDNDYGR 328
Query: 349 KVDVYSFGVLLLEIISCRKSF 369
VD + GV++ E++ R F
Sbjct: 329 AVDWWGLGVVMYEMMCGRLPF 349
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 113/274 (41%), Gaps = 46/274 (16%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE----KEFKNEVVVIGQTHH--KNL 226
G G FG VY G+ + V+K DR+ GE EVV++ + +
Sbjct: 18 GSGGFGSVYSGIRVSDNLPVAIKHVEK-DRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHE 282
+RLL + + + +L+ L LF + L+ +A +Q+ + + H
Sbjct: 77 IRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH- 132
Query: 283 DCSSQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
+C ++H DIK +NIL+D + ++ DFG LL T+ T GT+ Y PEW
Sbjct: 133 NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 186
Query: 342 RKSTITAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGD 400
R + V+S G+LL +++ DI + I+ F R
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVSS-------- 234
Query: 401 MEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKV 434
E + I+ WC+ PS RPT ++
Sbjct: 235 -ECQHLIR----------WCLALRPSDRPTFEEI 257
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 15/198 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
GRG+FG V ++TR + K + + + F E ++ + +V+L
Sbjct: 83 GRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYA 142
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA-FQIARGLLYLHEDCSSQIIHC 291
+ + +V E++ G L NL ++++ A F A +L L S IH
Sbjct: 143 FQDDRYLYMVMEYMPGGDLV-----NLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHR 197
Query: 292 DIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIK--TAIRGTKGYVAPEWYRKS----T 345
D+KP N+LLD + +++DFG + +N+ ++ TA+ GT Y++PE +
Sbjct: 198 DVKPDNMLLDKSGHLKLADFGTC--MKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGY 254
Query: 346 ITAKVDVYSFGVLLLEII 363
+ D +S GV L E++
Sbjct: 255 YGRECDWWSVGVFLYEML 272
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 123/308 (39%), Gaps = 46/308 (14%)
Query: 140 IRNSPGDGTVETNLRCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKK 199
+R +P + T L K E+ G G FG VY G+ + V+K
Sbjct: 12 LRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK 71
Query: 200 LDRVFQDGE----KEFKNEVVVIGQTHH--KNLVRLLGFCDEGQNRLLVYEFLNNGTLAS 253
DR+ GE EVV++ + ++RLL + + + +L+ L
Sbjct: 72 -DRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQ 127
Query: 254 FLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSSQIIHCDIKPQNILLD-DHYNARI 308
LF + L+ +A +Q+ + + H +C ++H DIK +NIL+D + ++
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKL 184
Query: 309 SDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK-VDVYSFGVLLLEIISCRK 367
DFG LL T+ T GT+ Y PEW R + V+S G+LL +++
Sbjct: 185 IDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG-- 238
Query: 368 SFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSL 427
DI + I+ F R E + I+ WC+ PS
Sbjct: 239 --DIPFEHDEEIIGGQVFFRQRVS---------XECQHLIR----------WCLALRPSD 277
Query: 428 RPTMRKVS 435
RPT ++
Sbjct: 278 RPTFEEIQ 285
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 89/196 (45%), Gaps = 13/196 (6%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 226
+F ++ G G+FG+ + + + VAVK ++R E + E++ H N+
Sbjct: 23 DFVKDIGSGNFGV---ARLMRDKLTKELVAVKYIERGAAIDEN-VQREIINHRSLRHPNI 78
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSS 286
VR + ++ E+ + G L + + S + Q+ G+ Y H S
Sbjct: 79 VRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCH---SM 135
Query: 287 QIIHCDIKPQNILLDDHYNAR--ISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKS 344
QI H D+K +N LLD R I DFG +K L+ K+ + GT Y+APE +
Sbjct: 136 QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP--KSTV-GTPAYIAPEVLLRQ 192
Query: 345 TITAKV-DVYSFGVLL 359
K+ DV+S GV L
Sbjct: 193 EYDGKIADVWSCGVTL 208
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 123/307 (40%), Gaps = 46/307 (14%)
Query: 140 IRNSPGDGTVETNLRCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKK 199
+R +P + T L K E+ G G FG VY G+ + V+K
Sbjct: 13 LRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK 72
Query: 200 LDRVFQDGE----KEFKNEVVVIGQTHH--KNLVRLLGFCDEGQNRLLVYEFLNNGTLAS 253
DR+ GE EVV++ + ++RLL + + + +L+ L
Sbjct: 73 -DRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQ 128
Query: 254 FLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSSQIIHCDIKPQNILLD-DHYNARI 308
LF + L+ +A +Q+ + + H +C ++H DIK +NIL+D + ++
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKL 185
Query: 309 SDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK-VDVYSFGVLLLEIISCRK 367
DFG LL T+ T GT+ Y PEW R + V+S G+LL +++
Sbjct: 186 IDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG-- 239
Query: 368 SFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSL 427
DI + I+ F R E + I+ WC+ PS
Sbjct: 240 --DIPFEHDEEIIGGQVFFRQRVS---------XECQHLIR----------WCLALRPSD 278
Query: 428 RPTMRKV 434
RPT ++
Sbjct: 279 RPTFEEI 285
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + A+K LD+ K+ + NE ++ + LV+L
Sbjct: 50 GTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E++ G + S L + S A QI YLH S +I
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+L+D +++DFG AK + K + GT Y+APE
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 92/201 (45%), Gaps = 13/201 (6%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDR---VFQDGEKEFKNEVVVIGQTHHKNLVRL 229
G+G+FG K ++ + + A+K L + + +D E V+ T H L
Sbjct: 14 GKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT-A 69
Query: 230 LGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQI 288
L + + +RL V E+ N G L L + +I L YLH S +
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRDV 126
Query: 289 IHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITA 348
++ DIK +N++LD + +I+DFGL K ++ T+K GT Y+APE +
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFC-GTPEYLAPEVLEDNDYGR 184
Query: 349 KVDVYSFGVLLLEIISCRKSF 369
VD + GV++ E++ R F
Sbjct: 185 AVDWWGLGVVMYEMMCGRLPF 205
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 15/198 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 232
GRG+FG V ++TR + K + + + F E ++ + +V+L
Sbjct: 78 GRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYA 137
Query: 233 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA-FQIARGLLYLHEDCSSQIIHC 291
+ + +V E++ G L NL ++++ A F A +L L S IH
Sbjct: 138 FQDDRYLYMVMEYMPGGDLV-----NLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHR 192
Query: 292 DIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIK--TAIRGTKGYVAPEWYRKS----T 345
D+KP N+LLD + +++DFG + +N+ ++ TA+ GT Y++PE +
Sbjct: 193 DVKPDNMLLDKSGHLKLADFGTC--MKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGY 249
Query: 346 ITAKVDVYSFGVLLLEII 363
+ D +S GV L E++
Sbjct: 250 YGRECDWWSVGVFLYEML 267
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 123/308 (39%), Gaps = 46/308 (14%)
Query: 140 IRNSPGDGTVETNLRCFSYKALEEATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKK 199
+R +P + T L K E+ G G FG VY G+ + V+K
Sbjct: 32 LRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK 91
Query: 200 LDRVFQDGE----KEFKNEVVVIGQTHH--KNLVRLLGFCDEGQNRLLVYEFLNNGTLAS 253
DR+ GE EVV++ + ++RLL + + + +L+ E
Sbjct: 92 -DRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQ 147
Query: 254 FLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSSQIIHCDIKPQNILLD-DHYNARI 308
LF + L+ +A +Q+ + + H +C ++H DIK +NIL+D + ++
Sbjct: 148 DLFDFITERGALQEELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKL 204
Query: 309 SDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK-VDVYSFGVLLLEIISCRK 367
DFG LL T+ T GT+ Y PEW R + V+S G+LL +++
Sbjct: 205 IDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG-- 258
Query: 368 SFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSL 427
DI + I+ F R E + I+ WC+ PS
Sbjct: 259 --DIPFEHDEEIIRGQVFFRQRVS---------XECQHLIR----------WCLALRPSD 297
Query: 428 RPTMRKVS 435
RPT ++
Sbjct: 298 RPTFEEIQ 305
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + + A+K LD+ K+ + NE ++ + LV+L
Sbjct: 43 GTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 99
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E++ G + S L + A QI YLH S +I
Sbjct: 100 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLI 156
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+L+D +++DFG AK + K + GT Y+APE
Sbjct: 157 YRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 211
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 212 VDWWALGVLIYEMAAGYPPF 231
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 92/201 (45%), Gaps = 13/201 (6%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDR---VFQDGEKEFKNEVVVIGQTHHKNLVRL 229
G+G+FG K ++ + + A+K L + + +D E V+ T H L
Sbjct: 14 GKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT-A 69
Query: 230 LGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQI 288
L + + +RL V E+ N G L L + +I L YLH S +
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRDV 126
Query: 289 IHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITA 348
++ DIK +N++LD + +I+DFGL K ++ T+K GT Y+APE +
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFC-GTPEYLAPEVLEDNDYGR 184
Query: 349 KVDVYSFGVLLLEIISCRKSF 369
VD + GV++ E++ R F
Sbjct: 185 AVDWWGLGVVMYEMMCGRLPF 205
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 113/275 (41%), Gaps = 46/275 (16%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE----KEFKNEVVVIGQTHH--KNL 226
G G FG VY G+ + V+K DR+ GE EVV++ + +
Sbjct: 18 GSGGFGSVYSGIRVSDNLPVAIKHVEK-DRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHE 282
+RLL + + + +L+ L LF + L+ +A +Q+ + + H
Sbjct: 77 IRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH- 132
Query: 283 DCSSQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
+C ++H DIK +NIL+D + ++ DFG LL T+ T GT+ Y PEW
Sbjct: 133 NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 186
Query: 342 RKSTITAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGD 400
R + V+S G+LL +++ DI + I+ F R
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVSS-------- 234
Query: 401 MEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVS 435
E + I+ WC+ PS RPT ++
Sbjct: 235 -ECQHLIR----------WCLALRPSDRPTFEEIQ 258
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 113/275 (41%), Gaps = 46/275 (16%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE----KEFKNEVVVIGQTHH--KNL 226
G G FG VY G+ + V+K DR+ GE EVV++ + +
Sbjct: 17 GSGGFGSVYSGIRVSDNLPVAIKHVEK-DRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHE 282
+RLL + + + +L+ L LF + L+ +A +Q+ + + H
Sbjct: 76 IRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH- 131
Query: 283 DCSSQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
+C ++H DIK +NIL+D + ++ DFG LL T+ T GT+ Y PEW
Sbjct: 132 NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 185
Query: 342 RKSTITAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGD 400
R + V+S G+LL +++ DI + I+ F R
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVSS-------- 233
Query: 401 MEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVS 435
E + I+ WC+ PS RPT ++
Sbjct: 234 -ECQHLIR----------WCLALRPSDRPTFEEIQ 257
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 113/275 (41%), Gaps = 46/275 (16%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE----KEFKNEVVVIGQTHH--KNL 226
G G FG VY G+ + V+K DR+ GE EVV++ + +
Sbjct: 33 GSGGFGSVYSGIRVSDNLPVAIKHVEK-DRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHE 282
+RLL + + + +L+ L LF + L+ +A +Q+ + + H
Sbjct: 92 IRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH- 147
Query: 283 DCSSQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
+C ++H DIK +NIL+D + ++ DFG LL T+ T GT+ Y PEW
Sbjct: 148 NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 201
Query: 342 RKSTITAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGD 400
R + V+S G+LL +++ DI + I+ F R
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVSS-------- 249
Query: 401 MEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVS 435
E + I+ WC+ PS RPT ++
Sbjct: 250 -ECQHLIR----------WCLALRPSDRPTFEEIQ 273
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 113/275 (41%), Gaps = 46/275 (16%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE----KEFKNEVVVIGQTHH--KNL 226
G G FG VY G+ + V+K DR+ GE EVV++ + +
Sbjct: 32 GSGGFGSVYSGIRVSDNLPVAIKHVEK-DRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHE 282
+RLL + + + +L+ L LF + L+ +A +Q+ + + H
Sbjct: 91 IRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH- 146
Query: 283 DCSSQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
+C ++H DIK +NIL+D + ++ DFG LL T+ T GT+ Y PEW
Sbjct: 147 NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 200
Query: 342 RKSTITAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGD 400
R + V+S G+LL +++ DI + I+ F R
Sbjct: 201 RYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVSS-------- 248
Query: 401 MEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVS 435
E + I+ WC+ PS RPT ++
Sbjct: 249 -ECQHLIR----------WCLALRPSDRPTFEEIQ 272
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 113/275 (41%), Gaps = 46/275 (16%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE----KEFKNEVVVIGQTHH--KNL 226
G G FG VY G+ + V+K DR+ GE EVV++ + +
Sbjct: 16 GSGGFGSVYSGIRVSDNLPVAIKHVEK-DRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 74
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHE 282
+RLL + + + +L+ L LF + L+ +A +Q+ + + H
Sbjct: 75 IRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH- 130
Query: 283 DCSSQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
+C ++H DIK +NIL+D + ++ DFG LL T+ T GT+ Y PEW
Sbjct: 131 NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 184
Query: 342 RKSTITAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGD 400
R + V+S G+LL +++ DI + I+ F R
Sbjct: 185 RYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVSS-------- 232
Query: 401 MEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVS 435
E + I+ WC+ PS RPT ++
Sbjct: 233 -ECQHLIR----------WCLALRPSDRPTFEEIQ 256
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 113/275 (41%), Gaps = 46/275 (16%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE----KEFKNEVVVIGQTHH--KNL 226
G G FG VY G+ + V+K DR+ GE EVV++ + +
Sbjct: 18 GSGGFGSVYSGIRVSDNLPVAIKHVEK-DRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHE 282
+RLL + + + +L+ L LF + L+ +A +Q+ + + H
Sbjct: 77 IRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH- 132
Query: 283 DCSSQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
+C ++H DIK +NIL+D + ++ DFG LL T+ T GT+ Y PEW
Sbjct: 133 NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 186
Query: 342 RKSTITAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGD 400
R + V+S G+LL +++ DI + I+ F R
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVSS-------- 234
Query: 401 MEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVS 435
E + I+ WC+ PS RPT ++
Sbjct: 235 -ECQHLIR----------WCLALRPSDRPTFEEIQ 258
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 113/275 (41%), Gaps = 46/275 (16%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE----KEFKNEVVVIGQTHH--KNL 226
G G FG VY G+ + V+K DR+ GE EVV++ + +
Sbjct: 32 GSGGFGSVYSGIRVSDNLPVAIKHVEK-DRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHE 282
+RLL + + + +L+ L LF + L+ +A +Q+ + + H
Sbjct: 91 IRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH- 146
Query: 283 DCSSQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
+C ++H DIK +NIL+D + ++ DFG LL T+ T GT+ Y PEW
Sbjct: 147 NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 200
Query: 342 RKSTITAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGD 400
R + V+S G+LL +++ DI + I+ F R
Sbjct: 201 RYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVS--------- 247
Query: 401 MEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVS 435
E + I+ WC+ PS RPT ++
Sbjct: 248 XECQHLIR----------WCLALRPSDRPTFEEIQ 272
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 113/275 (41%), Gaps = 46/275 (16%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE----KEFKNEVVVIGQTHH--KNL 226
G G FG VY G+ + V+K DR+ GE EVV++ + +
Sbjct: 13 GSGGFGSVYSGIRVSDNLPVAIKHVEK-DRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHE 282
+RLL + + + +L+ L LF + L+ +A +Q+ + + H
Sbjct: 72 IRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH- 127
Query: 283 DCSSQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
+C ++H DIK +NIL+D + ++ DFG LL T+ T GT+ Y PEW
Sbjct: 128 NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 181
Query: 342 RKSTITAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGD 400
R + V+S G+LL +++ DI + I+ F R
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVSS-------- 229
Query: 401 MEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVS 435
E + I+ WC+ PS RPT ++
Sbjct: 230 -ECQHLIR----------WCLALRPSDRPTFEEIQ 253
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 113/275 (41%), Gaps = 46/275 (16%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE----KEFKNEVVVIGQTHH--KNL 226
G G FG VY G+ + V+K DR+ GE EVV++ + +
Sbjct: 40 GSGGFGSVYSGIRVSDNLPVAIKHVEK-DRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 98
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHE 282
+RLL + + + +L+ L LF + L+ +A +Q+ + + H
Sbjct: 99 IRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH- 154
Query: 283 DCSSQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
+C ++H DIK +NIL+D + ++ DFG LL T+ T GT+ Y PEW
Sbjct: 155 NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 208
Query: 342 RKSTITAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGD 400
R + V+S G+LL +++ DI + I+ F R
Sbjct: 209 RYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVS--------- 255
Query: 401 MEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVS 435
E + I+ WC+ PS RPT ++
Sbjct: 256 XECQHLIR----------WCLALRPSDRPTFEEIQ 280
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 113/275 (41%), Gaps = 46/275 (16%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE----KEFKNEVVVIGQTHH--KNL 226
G G FG VY G+ + V+K DR+ GE EVV++ + +
Sbjct: 52 GSGGFGSVYSGIRVSDNLPVAIKHVEK-DRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHE 282
+RLL + + + +L+ L LF + L+ +A +Q+ + + H
Sbjct: 111 IRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH- 166
Query: 283 DCSSQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
+C ++H DIK +NIL+D + ++ DFG LL T+ T GT+ Y PEW
Sbjct: 167 NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 220
Query: 342 RKSTITAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGD 400
R + V+S G+LL +++ DI + I+ F R
Sbjct: 221 RYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVSS-------- 268
Query: 401 MEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVS 435
E + I+ WC+ PS RPT ++
Sbjct: 269 -ECQHLIR----------WCLALRPSDRPTFEEIQ 292
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 112/260 (43%), Gaps = 36/260 (13%)
Query: 167 NFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKN--EVVVIGQTHHK 224
K G G++G+V T + + VA+KK++ F + E+ ++ H+
Sbjct: 14 QLKSLLGEGAYGVVCSA---THKPTGEIVAIKKIE-PFDKPLFALRTLREIKILKHFKHE 69
Query: 225 NLVRLLGFCD----EGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 280
N++ + E N + + + L L + + +++ I +Q R + L
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI-YQTLRAVKVL 128
Query: 281 HEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIR--GTKGYVAP 338
H S +IH D+KP N+L++ + + ++ DFGLA+++ + + + + G VA
Sbjct: 129 H---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVAT 185
Query: 339 EWYRKSTI-------TAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNG 391
WYR + + +DV+S G +L E+ R F G +Y F
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP---GRDYRHQLLLIFG----- 237
Query: 392 KLDDLVEGDMEAMNDIKCVE 411
+ G + ND++C+E
Sbjct: 238 -----IIGTPHSDNDLRCIE 252
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 113/275 (41%), Gaps = 46/275 (16%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE----KEFKNEVVVIGQTHH--KNL 226
G G FG VY G+ + V+K DR+ GE EVV++ + +
Sbjct: 33 GSGGFGSVYSGIRVSDNLPVAIKHVEK-DRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHE 282
+RLL + + + +L+ L LF + L+ +A +Q+ + + H
Sbjct: 92 IRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH- 147
Query: 283 DCSSQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
+C ++H DIK +NIL+D + ++ DFG LL T+ T GT+ Y PEW
Sbjct: 148 NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 201
Query: 342 RKSTITAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGD 400
R + V+S G+LL +++ DI + I+ F R
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVS--------- 248
Query: 401 MEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVS 435
E + I+ WC+ PS RPT ++
Sbjct: 249 XECQHLIR----------WCLALRPSDRPTFEEIQ 273
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 113/275 (41%), Gaps = 46/275 (16%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE----KEFKNEVVVIGQTHH--KNL 226
G G FG VY G+ + V+K DR+ GE EVV++ + +
Sbjct: 13 GSGGFGSVYSGIRVSDNLPVAIKHVEK-DRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHE 282
+RLL + + + +L+ L LF + L+ +A +Q+ + + H
Sbjct: 72 IRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH- 127
Query: 283 DCSSQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
+C ++H DIK +NIL+D + ++ DFG LL T+ T GT+ Y PEW
Sbjct: 128 NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 181
Query: 342 RKSTITAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGD 400
R + V+S G+LL +++ DI + I+ F R
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIGGQVFFRQRVSS-------- 229
Query: 401 MEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVS 435
E + I+ WC+ PS RPT ++
Sbjct: 230 -ECQHLIR----------WCLALRPSDRPTFEEIQ 253
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 89/200 (44%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + + A+K LD+ K+ + NE + + LV+L
Sbjct: 51 GTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKL 107
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E+ G + S L + S A QI YLH S +I
Sbjct: 108 EFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 164
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+L+D +++DFG AK + K + GT Y+APE
Sbjct: 165 YRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 220 VDWWALGVLIYEMAAGYPPF 239
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 118/268 (44%), Gaps = 50/268 (18%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT---HHKNL 226
++ G+G +G V+ G + VAVK VF E+ I QT H+N+
Sbjct: 43 KQIGKGRYGEVWMG-----KWRGEKVAVK----VFFTTEEASWFRETEIYQTVLMRHENI 93
Query: 227 VRLLGFCDEGQNR----LLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHE 282
+ + +G L+ ++ NG+L +L + ++ +A+ GL +LH
Sbjct: 94 LGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSM-LKLAYSSVSGLCHLHT 152
Query: 283 DCSS-----QIIHCDIKPQNILLDDHYNARISDFGLA-KLLTLNQSKTIKTAIR-GTKGY 335
+ S I H D+K +NIL+ + I+D GLA K ++ I R GTK Y
Sbjct: 153 EIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRY 212
Query: 336 VAPEW--------YRKSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 387
+ PE + +S I A D+YSFG++L E+ R+ + EEY +
Sbjct: 213 MPPEVLDESLNRNHFQSYIMA--DMYSFGLILWEV--ARRCVSGGIVEEYQL-------- 260
Query: 388 YRNGKLDDLVEGD--MEAMNDIKCVEKL 413
DLV D E M +I C++KL
Sbjct: 261 ----PYHDLVPSDPSYEDMREIVCIKKL 284
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE----KEFKNEVVVIGQTHH--KNL 226
G G FG VY G+ + V+K DR+ GE EVV++ + +
Sbjct: 33 GSGGFGSVYSGIRVSDNLPVAIKHVEK-DRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHE 282
+RLL + + + +L+ L LF + L+ +A +Q+ + + H
Sbjct: 92 IRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH- 147
Query: 283 DCSSQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
+C ++H DIK +NIL+D + ++ DFG LL T+ T GT+ Y PEW
Sbjct: 148 NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 201
Query: 342 RKSTITAK-VDVYSFGVLLLEII 363
R + V+S G+LL +++
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMV 224
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + S A+K LD+ K+ + NE ++ + LV+L
Sbjct: 50 GTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E++ G + S L + S A QI YLH S +I
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+L+D +++DFG AK + K + GT +APE
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEALAPEIILSKGYNKA 218
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 89/200 (44%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + A+K LD+ K+ + NE ++ + LV+L
Sbjct: 50 GTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E+ G + S L + S A QI YLH S +I
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+++D +++DFG AK + K + GT Y+APE
Sbjct: 164 YRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 112/275 (40%), Gaps = 46/275 (16%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGE----KEFKNEVVVIGQTHH--KNL 226
G G FG VY G+ + V+K DR+ GE EVV++ + +
Sbjct: 13 GSGGFGSVYSGIRVSDNLPVAIKHVEK-DRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHE 282
+RLL + + + +L+ L LF + L+ +A +Q+ + + H
Sbjct: 72 IRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH- 127
Query: 283 DCSSQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWY 341
+ ++H DIK +NIL+D + ++ DFG LL T+ T GT+ Y PEW
Sbjct: 128 --NXGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 181
Query: 342 RKSTITAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGD 400
R + V+S G+LL +++ DI + I+ F R
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVS--------- 228
Query: 401 MEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVS 435
E + I+ WC+ PS RPT ++
Sbjct: 229 XECQHLIR----------WCLALRPSDRPTFEEIQ 253
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 12/201 (5%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDR---VFQDGEKEFKNEVVVIGQTHHKNLVRL 229
G+G+FG V ++ + + A+K L + V +D E V+ + H L
Sbjct: 19 GKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT-A 74
Query: 230 LGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQI 288
L + + +RL V E+ N G L L S + +I L YLH + +
Sbjct: 75 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE--KNV 132
Query: 289 IHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITA 348
++ D+K +N++LD + +I+DFGL K + T+K GT Y+APE +
Sbjct: 133 VYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFC-GTPEYLAPEVLEDNDYGR 190
Query: 349 KVDVYSFGVLLLEIISCRKSF 369
VD + GV++ E++ R F
Sbjct: 191 AVDWWGLGVVMYEMMCGRLPF 211
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 89/200 (44%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + A+K LD+ K+ + NE ++ + LV+L
Sbjct: 50 GTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E+ G + S L + S A QI YLH S +I
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+++D +++DFG AK + K + GT Y+APE
Sbjct: 164 YRDLKPENLMIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 12/201 (5%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDR---VFQDGEKEFKNEVVVIGQTHHKNLVRL 229
G+G+FG V ++ + + A+K L + V +D E V+ + H L
Sbjct: 17 GKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT-A 72
Query: 230 LGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQI 288
L + + +RL V E+ N G L L S + +I L YLH + +
Sbjct: 73 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE--KNV 130
Query: 289 IHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITA 348
++ D+K +N++LD + +I+DFGL K + T+K GT Y+APE +
Sbjct: 131 VYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFC-GTPEYLAPEVLEDNDYGR 188
Query: 349 KVDVYSFGVLLLEIISCRKSF 369
VD + GV++ E++ R F
Sbjct: 189 AVDWWGLGVVMYEMMCGRLPF 209
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 12/201 (5%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDR---VFQDGEKEFKNEVVVIGQTHHKNLVRL 229
G+G+FG V ++ + + A+K L + V +D E V+ + H L
Sbjct: 18 GKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT-A 73
Query: 230 LGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQI 288
L + + +RL V E+ N G L L S + +I L YLH + +
Sbjct: 74 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE--KNV 131
Query: 289 IHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITA 348
++ D+K +N++LD + +I+DFGL K + T+K GT Y+APE +
Sbjct: 132 VYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFC-GTPEYLAPEVLEDNDYGR 189
Query: 349 KVDVYSFGVLLLEIISCRKSF 369
VD + GV++ E++ R F
Sbjct: 190 AVDWWGLGVVMYEMMCGRLPF 210
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 119/259 (45%), Gaps = 20/259 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKN------EVVVIGQTHHKNL 226
G G+FG V+ V + + V K ++V +D E E+ ++ + H N+
Sbjct: 33 GSGAFGFVWTAV-DKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 227 VRLLG-FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 285
+++L F ++G +L++ + + L +F+ + + L + I Q+ + YL
Sbjct: 92 IKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLR---L 148
Query: 286 SQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKST 345
IIH DIK +NI++ + + ++ DFG A L + K T GT Y APE +
Sbjct: 149 KDIIHRDIKDENIVIAEDFTIKLIDFGSAAY--LERGKLFYT-FCGTIEYCAPEVLMGNP 205
Query: 346 ITA-KVDVYSFGVLLLEIISCRKSF-DIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEA 403
+++++S GV L ++ F ++E E AI + + +L LV G ++
Sbjct: 206 YRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYLV----SKELMSLVSGLLQP 261
Query: 404 MNDIKCVEKLLMVSIWCIQ 422
+ + + + L+ W Q
Sbjct: 262 VPERRTTLEKLVTDPWVTQ 280
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDR--VFQDGEKE-FKNEVVVIGQTHHKNLVRL 229
GRG+FG V + + + A+K L++ + + E F+ E V+ K + L
Sbjct: 83 GRGAFGEV---AVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTL 139
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+ N LV ++ G L + L F + P R F +A ++ +
Sbjct: 140 HYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMAR----FYLAEMVIAIDSVHQLH 195
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIR-GTKGYVAPEWYR---- 342
+H DIKP NIL+D + + R++DFG L L + T+++++ GT Y++PE +
Sbjct: 196 YVHRDIKPDNILMDMNGHIRLADFG--SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEG 253
Query: 343 -KSTITAKVDVYSFGVLLLEIISCRKSFDIE 372
K + D +S GV + E++ F E
Sbjct: 254 GKGRYGPECDWWSLGVCMYEMLYGETPFYAE 284
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + A+K LD+ K+ + NE ++ + LV+L
Sbjct: 51 GTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFL--FGNL-KPSWNLRTNIAFQIARGLLYLHEDCSS 286
+ N +V E++ G + S L G +P A QI YLH S
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF---YAAQIVLTFEYLH---SL 161
Query: 287 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTI 346
+I+ D+KP+N+L+D +++DFG AK + K + GT Y+APE
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 347 TAKVDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + A+K LD+ K+ + NE ++ + LV+L
Sbjct: 50 GTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFL--FGNL-KPSWNLRTNIAFQIARGLLYLHEDCSS 286
+ N +V E++ G + S L G +P A QI YLH S
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF---YAAQIVLTFEYLH---SL 160
Query: 287 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTI 346
+I+ D+KP+N+L+D +++DFG AK + K + GT Y+APE
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 347 TAKVDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 89/200 (44%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + A+K LD+ K+ + NE ++ + LV+L
Sbjct: 50 GTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E++ G + S L + A QI YLH S +I
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+L+D +++DFG AK + K + GT Y+APE
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 88/196 (44%), Gaps = 19/196 (9%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK---EFKNEVVVIGQTHHKNL 226
++ G G+FG+ + + S VAVK ++R GEK K E++ H N+
Sbjct: 25 KDIGSGNFGVAR---LMRDKQSNELVAVKYIER----GEKIDENVKREIINHRSLRHPNI 77
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSS 286
VR + +V E+ + G L + + S + Q+ G+ Y H +
Sbjct: 78 VRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCH---AM 134
Query: 287 QIIHCDIKPQNILLDDHYNAR--ISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKS 344
Q+ H D+K +N LLD R I FG +K L+ K+ + GT Y+APE K
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQP--KSTV-GTPAYIAPEVLLKK 191
Query: 345 TITAKV-DVYSFGVLL 359
KV DV+S GV L
Sbjct: 192 EYDGKVADVWSCGVTL 207
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 20/202 (9%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHH-KNLVRLLG 231
GRG + V++ + T+ V VK L V + + K E+ ++ N++ L
Sbjct: 46 GRGKYSEVFEAI---NITNNEKVVVKILKPV---KKNKIKREIKILENLRGGPNIITLAD 99
Query: 232 FCDEGQNRL--LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ +R LV+E +NN L+ L +++R + ++I + L Y H S I+
Sbjct: 100 IVKDPVSRTPALVFEHVNNTDFKQ-LYQTLT-DYDIRFYM-YEILKALDYCH---SMGIM 153
Query: 290 HCDIKPQNILLD-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTI-T 347
H D+KP N+++D +H R+ D+GLA+ Q ++ A R KG PE +
Sbjct: 154 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLVDYQMYD 210
Query: 348 AKVDVYSFGVLLLEIISCRKSF 369
+D++S G +L +I ++ F
Sbjct: 211 YSLDMWSLGCMLASMIFRKEPF 232
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 88/196 (44%), Gaps = 19/196 (9%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEK---EFKNEVVVIGQTHHKNL 226
++ G G+FG+ + + S VAVK ++R GEK K E++ H N+
Sbjct: 25 KDIGSGNFGVAR---LMRDKQSNELVAVKYIER----GEKIDENVKREIINHRSLRHPNI 77
Query: 227 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSS 286
VR + +V E+ + G L + + S + Q+ G+ Y H +
Sbjct: 78 VRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCH---AM 134
Query: 287 QIIHCDIKPQNILLDDHYNAR--ISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKS 344
Q+ H D+K +N LLD R I FG +K L+ S+ T GT Y+APE K
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLH-SQPKDTV--GTPAYIAPEVLLKK 191
Query: 345 TITAKV-DVYSFGVLL 359
KV DV+S GV L
Sbjct: 192 EYDGKVADVWSCGVTL 207
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + A+K LD+ K+ + NE ++ + L +L
Sbjct: 51 GTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKL 107
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E+ G + S L + S A QI YLH S +I
Sbjct: 108 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 164
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+++D +++DFG AK + K + GT Y+APE
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 220 VDWWALGVLIYEMAAGYPPF 239
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + A+K LD+ K+ + NE ++ + L +L
Sbjct: 51 GTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKL 107
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E+ G + S L + S A QI YLH S +I
Sbjct: 108 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 164
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+++D +++DFG AK + K + GT Y+APE
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 220 VDWWALGVLIYEMAAGYPPF 239
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + A+K LD+ K+ + NE ++ + LV+L
Sbjct: 50 GTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E+ G + S L + A QI YLH S +I
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+++D +++DFG AK + K + GT Y+APE
Sbjct: 164 YRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 9/107 (8%)
Query: 268 NIAFQIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKT 327
IA I + L +LH S +IH D+KP N+L++ + DFG++ L + +K I
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 328 AIRGTKGYVAPEW----YRKSTITAKVDVYSFGVLLLEIISCRKSFD 370
G K Y APE + + K D++S G+ +E+ R +D
Sbjct: 198 ---GCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYD 241
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 20/211 (9%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH-HKNLVRLLG 231
G G++ V V + + AVK +++ EV + Q +KN++ L+
Sbjct: 22 GEGAYAKVQGAV---SLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIE 78
Query: 232 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHC 291
F ++ LV+E L G++ + + + + + +A L +LH + I H
Sbjct: 79 FFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLH---TKGIAHR 135
Query: 292 DIKPQNILLDDHYN---ARISDFGLAKLLTLNQSKTIKTAIR-----GTKGYVAPEWYRK 343
D+KP+NIL + +I DF L + LN S T T G+ Y+APE
Sbjct: 136 DLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEV 195
Query: 344 STITA-----KVDVYSFGVLLLEIISCRKSF 369
T A + D++S GV+L ++S F
Sbjct: 196 FTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 32/214 (14%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 229
E G+G +G V++G + + + + F+ E E N V++ H+N+
Sbjct: 43 ECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFR--ETELYNTVML----RHENI--- 93
Query: 230 LGFC-------DEGQNRLLVYEFLNNGTLASFL-FGNLKPSWNLRTNIAFQIARGLLYLH 281
LGF L+ + G+L +L L LR I IA GL +LH
Sbjct: 94 LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR--IVLSIASGLAHLH 151
Query: 282 EDC-----SSQIIHCDIKPQNILLDDHYNARISDFGLAKL--LTLNQSKTIKTAIRGTKG 334
+ I H D+K +NIL+ + I+D GLA + + NQ GTK
Sbjct: 152 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 211
Query: 335 YVAPEWYRKSTIT------AKVDVYSFGVLLLEI 362
Y+APE ++ +VD+++FG++L E+
Sbjct: 212 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 93/215 (43%), Gaps = 34/215 (15%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 229
E G+G +G V++G + + + + F+ E E N V++ H+N+
Sbjct: 14 ECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFR--ETELYNTVML----RHENI--- 64
Query: 230 LGFC-------DEGQNRLLVYEFLNNGTLASFL-FGNLKPSWNLRTNIAFQIARGLLYLH 281
LGF L+ + G+L +L L LR I IA GL +LH
Sbjct: 65 LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR--IVLSIASGLAHLH 122
Query: 282 EDC-----SSQIIHCDIKPQNILLDDHYNARISDFGLAKL--LTLNQSKTIKTAIRGTKG 334
+ I H D+K +NIL+ + I+D GLA + + NQ GTK
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 182
Query: 335 YVAPEWYRKSTITA-------KVDVYSFGVLLLEI 362
Y+APE TI +VD+++FG++L E+
Sbjct: 183 YMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 93/215 (43%), Gaps = 34/215 (15%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 229
E G+G +G V++G + + + + F+ E E N V++ H+N+
Sbjct: 14 ECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFR--ETELYNTVML----RHENI--- 64
Query: 230 LGFC-------DEGQNRLLVYEFLNNGTLASFL-FGNLKPSWNLRTNIAFQIARGLLYLH 281
LGF L+ + G+L +L L LR I IA GL +LH
Sbjct: 65 LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR--IVLSIASGLAHLH 122
Query: 282 EDC-----SSQIIHCDIKPQNILLDDHYNARISDFGLAKL--LTLNQSKTIKTAIRGTKG 334
+ I H D+K +NIL+ + I+D GLA + + NQ GTK
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 182
Query: 335 YVAPEWYRKSTITA-------KVDVYSFGVLLLEI 362
Y+APE TI +VD+++FG++L E+
Sbjct: 183 YMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 126/305 (41%), Gaps = 56/305 (18%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 229
E G+G +G V++G+ + + + F+ E E N V++ H N++
Sbjct: 14 ECVGKGRYGEVWRGLWHGESVAVKIFSSRDEQSWFR--ETEIYNTVLL----RHDNILGF 67
Query: 230 LGFCDEGQNR----LLVYEFLNNGTLASFL-FGNLKPSWNLRTNIAFQIARGLLYLHEDC 284
+ +N L+ + +G+L FL L+P LR +A A GL +LH +
Sbjct: 68 IASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALR--LAVSAACGLAHLHVEI 125
Query: 285 -----SSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKT-IKTAIR-GTKGYVA 337
I H D K +N+L+ + I+D GLA + + I R GTK Y+A
Sbjct: 126 FGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMA 185
Query: 338 PEWYRKSTIT------AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNG 391
PE + T D+++FG++L EI R++ + E+Y
Sbjct: 186 PEVLDEQIRTDCFESYKWTDIWAFGLVLWEI--ARRTIVNGIVEDY------------RP 231
Query: 392 KLDDLVEGD--MEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEVDVP-- 447
D+V D E M + CV+ Q+ P++ P +L G+ ++
Sbjct: 232 PFYDVVPNDPSFEDMKKVVCVD----------QQTPTI-PNRLAADPVLSGLAQMMRECW 280
Query: 448 -PNPS 451
PNPS
Sbjct: 281 YPNPS 285
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 87/200 (43%), Gaps = 14/200 (7%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVRL 229
G GSFG V ++ + A+K LD+ K+ + NE ++ + L +L
Sbjct: 51 GTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKL 107
Query: 230 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQII 289
+ N +V E+ G + S L + A QI YLH S +I
Sbjct: 108 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLI 164
Query: 290 HCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTITAK 349
+ D+KP+N+++D +++DFG AK + K + GT Y+APE
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 350 VDVYSFGVLLLEIISCRKSF 369
VD ++ GVL+ E+ + F
Sbjct: 220 VDWWALGVLIYEMAAGYPPF 239
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 20/211 (9%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNE--VVVIGQTHHKNLVRLL 230
GRG+FG V ++ T + K + + + F+ E V+V G + L
Sbjct: 83 GRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDC---QWITAL 139
Query: 231 GFCDEGQNRL-LVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+ + +N L LV ++ G L + L F + P R F I +L +
Sbjct: 140 HYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMAR----FYIGEMVLAIDSIHQLH 195
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIR-GTKGYVAPEWYRK--- 343
+H DIKP N+LLD + + R++DFG L +N T+++++ GT Y++PE +
Sbjct: 196 YVHRDIKPDNVLLDVNGHIRLADFG--SCLKMNDDGTVQSSVAVGTPDYISPEILQAMED 253
Query: 344 --STITAKVDVYSFGVLLLEIISCRKSFDIE 372
+ D +S GV + E++ F E
Sbjct: 254 GMGKYGPECDWWSLGVCMYEMLYGETPFYAE 284
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 20/211 (9%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNE--VVVIGQTHHKNLVRLL 230
GRG+FG V ++ T + K + + + F+ E V+V G + L
Sbjct: 99 GRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQ---WITAL 155
Query: 231 GFCDEGQNRL-LVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQ 287
+ + +N L LV ++ G L + L F + P R F I +L +
Sbjct: 156 HYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMAR----FYIGEMVLAIDSIHQLH 211
Query: 288 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIR-GTKGYVAPEWYRK--- 343
+H DIKP N+LLD + + R++DFG L +N T+++++ GT Y++PE +
Sbjct: 212 YVHRDIKPDNVLLDVNGHIRLADFG--SCLKMNDDGTVQSSVAVGTPDYISPEILQAMED 269
Query: 344 --STITAKVDVYSFGVLLLEIISCRKSFDIE 372
+ D +S GV + E++ F E
Sbjct: 270 GMGKYGPECDWWSLGVCMYEMLYGETPFYAE 300
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 47/217 (21%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKE-----FKNEVVVIGQTHHKNLV 227
G+G+FG V+K R + VA+KK V + EKE E+ ++ H+N+V
Sbjct: 27 GQGTFGEVFKA---RHRKTGQKVALKK---VLMENEKEGFPITALREIKILQLLKHENVV 80
Query: 228 RLLGFCDEGQ---NR-----LLVYEF-------LNNGTLASFLFGNLKPSWNLRTNIAFQ 272
L+ C NR LV++F L + L F +K + N
Sbjct: 81 NLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN---- 136
Query: 273 IARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGT 332
GL Y+H + +I+H D+K N+L+ +++DFGLA+ +L ++ +
Sbjct: 137 ---GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN----SQPNRY 186
Query: 333 KGYVAPEWYRKSTIT-------AKVDVYSFGVLLLEI 362
V WYR + +D++ G ++ E+
Sbjct: 187 XNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 47/217 (21%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKE-----FKNEVVVIGQTHHKNLV 227
G+G+FG V+K R + VA+KK V + EKE E+ ++ H+N+V
Sbjct: 26 GQGTFGEVFKA---RHRKTGQKVALKK---VLMENEKEGFPITALREIKILQLLKHENVV 79
Query: 228 RLLGFCDEGQ---NR-----LLVYEF-------LNNGTLASFLFGNLKPSWNLRTNIAFQ 272
L+ C NR LV++F L + L F +K + N
Sbjct: 80 NLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN---- 135
Query: 273 IARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGT 332
GL Y+H + +I+H D+K N+L+ +++DFGLA+ +L ++ +
Sbjct: 136 ---GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN----SQPNRY 185
Query: 333 KGYVAPEWYRKSTIT-------AKVDVYSFGVLLLEI 362
V WYR + +D++ G ++ E+
Sbjct: 186 XNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 222
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 117/308 (37%), Gaps = 57/308 (18%)
Query: 163 EATDNFKEEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKEFKNEVV------ 216
EA G+G FG V+ G T R VA+K + R G + V
Sbjct: 30 EAEYRLGPLLGKGGFGTVFAGHRLTDRLQ---VAIKVIPRNRVLGWSPLSDSVTCPLEVA 86
Query: 217 ----VIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF- 271
V H ++RLL + + + +LV E A LF + L +
Sbjct: 87 LLWKVGAGGGHPGVIRLLDWFETQEGFMLVLE---RPLPAQDLFDYITEKGPLGEGPSRC 143
Query: 272 ---QIARGLLYLHEDCSSQIIHCDIKPQNILLDDHYN-ARISDFGLAKLLTLNQSKTIKT 327
Q+ + + H S ++H DIK +NIL+D A++ DFG LL T
Sbjct: 144 FFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAKLIDFGSGALL----HDEPYT 196
Query: 328 AIRGTKGYVAPEWYRKSTITA-KVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFD 386
GT+ Y PEW + A V+S G+LL +++ DI + IL
Sbjct: 197 DFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCG----DIPFERDQEILE----- 247
Query: 387 CYRNGKLDDLVEGDMEAMNDIKCVEKLLMVSIWCIQEDPSLRPTMRKVSQMLEGVVEV-- 444
E A C + C+ PS RP++ ++ +L+ ++
Sbjct: 248 ----------AELHFPAHVSPDCCALIRR----CLAPKPSSRPSLEEI--LLDPWMQTPA 291
Query: 445 -DVPPNPS 451
DVP NPS
Sbjct: 292 EDVPLNPS 299
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 47/217 (21%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKE-----FKNEVVVIGQTHHKNLV 227
G+G+FG V+K R + VA+KK V + EKE E+ ++ H+N+V
Sbjct: 27 GQGTFGEVFKA---RHRKTGQKVALKK---VLMENEKEGFPITALREIKILQLLKHENVV 80
Query: 228 RLLGFCDEGQ---NR-----LLVYEF-------LNNGTLASFLFGNLKPSWNLRTNIAFQ 272
L+ C NR LV++F L + L F +K + N
Sbjct: 81 NLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN---- 136
Query: 273 IARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGT 332
GL Y+H + +I+H D+K N+L+ +++DFGLA+ +L ++ +
Sbjct: 137 ---GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN----SQPNRY 186
Query: 333 KGYVAPEWYRKSTIT-------AKVDVYSFGVLLLEI 362
V WYR + +D++ G ++ E+
Sbjct: 187 XNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 47/217 (21%)
Query: 173 GRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDGEKE-----FKNEVVVIGQTHHKNLV 227
G+G+FG V+K R + VA+KK V + EKE E+ ++ H+N+V
Sbjct: 27 GQGTFGEVFKA---RHRKTGQKVALKK---VLMENEKEGFPITALREIKILQLLKHENVV 80
Query: 228 RLLGFCDEGQ---NR-----LLVYEF-------LNNGTLASFLFGNLKPSWNLRTNIAFQ 272
L+ C NR LV++F L + L F +K + N
Sbjct: 81 NLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN---- 136
Query: 273 IARGLLYLHEDCSSQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLNQSKTIKTAIRGT 332
GL Y+H + +I+H D+K N+L+ +++DFGLA+ +L ++ +
Sbjct: 137 ---GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN----SQPNRY 186
Query: 333 KGYVAPEWYRKSTIT-------AKVDVYSFGVLLLEI 362
V WYR + +D++ G ++ E+
Sbjct: 187 XNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 11/131 (8%)
Query: 241 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILL 300
LV+E +NN L+ L +++R + ++I + L Y H S I+H D+KP N+L+
Sbjct: 111 LVFEHVNNTDFKQ-LYQTLT-DYDIRFYM-YEILKALDYCH---SMGIMHRDVKPHNVLI 164
Query: 301 D-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTI-TAKVDVYSFGVL 358
D +H R+ D+GLA+ Q ++ A R KG PE + +D++S G +
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLVDYQMYDYSLDMWSLGCM 221
Query: 359 LLEIISCRKSF 369
L +I ++ F
Sbjct: 222 LASMIFRKEPF 232
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 17/140 (12%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG--EKEFKNEV---VVIGQTHHK 224
E+ G G FG V+K V R A+K+ + E+ EV V+GQ H
Sbjct: 17 EKIGSGEFGSVFKCV---KRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ--HS 71
Query: 225 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR----TNIAFQIARGLLYL 280
++VR E + L+ E+ N G+LA + N + + ++ Q+ RGL Y+
Sbjct: 72 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 131
Query: 281 HEDCSSQIIHCDIKPQNILL 300
H S ++H DIKP NI +
Sbjct: 132 H---SMSLVHMDIKPSNIFI 148
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 17/140 (12%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG--EKEFKNEV---VVIGQTHHK 224
E+ G G FG V+K V R A+K+ + E+ EV V+GQ H
Sbjct: 15 EKIGSGEFGSVFKCV---KRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ--HS 69
Query: 225 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR----TNIAFQIARGLLYL 280
++VR E + L+ E+ N G+LA + N + + ++ Q+ RGL Y+
Sbjct: 70 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 129
Query: 281 HEDCSSQIIHCDIKPQNILL 300
H S ++H DIKP NI +
Sbjct: 130 H---SMSLVHMDIKPSNIFI 146
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 17/140 (12%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG--EKEFKNEV---VVIGQTHHK 224
E+ G G FG V+K V R A+K+ + E+ EV V+GQ H
Sbjct: 15 EKIGSGEFGSVFKCV---KRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ--HS 69
Query: 225 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR----TNIAFQIARGLLYL 280
++VR E + L+ E+ N G+LA + N + + ++ Q+ RGL Y+
Sbjct: 70 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 129
Query: 281 HEDCSSQIIHCDIKPQNILL 300
H S ++H DIKP NI +
Sbjct: 130 H---SMSLVHMDIKPSNIFI 146
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 17/140 (12%)
Query: 170 EEAGRGSFGIVYKGVIETTRTSTTAVAVKKLDRVFQDG--EKEFKNEV---VVIGQTHHK 224
E+ G G FG V+K V R A+K+ + E+ EV V+GQ H
Sbjct: 13 EKIGSGEFGSVFKCV---KRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ--HS 67
Query: 225 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR----TNIAFQIARGLLYL 280
++VR E + L+ E+ N G+LA + N + + ++ Q+ RGL Y+
Sbjct: 68 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 127
Query: 281 HEDCSSQIIHCDIKPQNILL 300
H S ++H DIKP NI +
Sbjct: 128 H---SMSLVHMDIKPSNIFI 144
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 11/131 (8%)
Query: 241 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILL 300
LV+E +NN L+ L +++R + ++I + L Y H S I+H D+KP N+++
Sbjct: 111 LVFEHVNNTDFKQ-LYQTLT-DYDIRFYM-YEILKALDYCH---SMGIMHRDVKPHNVMI 164
Query: 301 D-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTI-TAKVDVYSFGVL 358
D +H R+ D+GLA+ Q ++ A R KG PE + +D++S G +
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLVDYQMYDYSLDMWSLGCM 221
Query: 359 LLEIISCRKSF 369
L +I ++ F
Sbjct: 222 LASMIFRKEPF 232
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 11/131 (8%)
Query: 241 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILL 300
LV+E +NN L+ L +++R + ++I + L Y H S I+H D+KP N+++
Sbjct: 110 LVFEHVNNTDFKQ-LYQTLT-DYDIRFYM-YEILKALDYCH---SMGIMHRDVKPHNVMI 163
Query: 301 D-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTI-TAKVDVYSFGVL 358
D +H R+ D+GLA+ Q ++ A R KG PE + +D++S G +
Sbjct: 164 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLVDYQMYDYSLDMWSLGCM 220
Query: 359 LLEIISCRKSF 369
L +I ++ F
Sbjct: 221 LASMIFRKEPF 231
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 11/131 (8%)
Query: 241 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILL 300
LV+E +NN L+ L +++R + ++I + L Y H S I+H D+KP N+++
Sbjct: 111 LVFEHVNNTDFKQ-LYQTLT-DYDIRFYM-YEILKALDYCH---SMGIMHRDVKPHNVMI 164
Query: 301 D-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTI-TAKVDVYSFGVL 358
D +H R+ D+GLA+ Q ++ A R KG PE + +D++S G +
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLVDYQMYDYSLDMWSLGCM 221
Query: 359 LLEIISCRKSF 369
L +I ++ F
Sbjct: 222 LASMIFRKEPF 232
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 11/131 (8%)
Query: 241 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILL 300
LV+E +NN L+ L +++R + ++I + L Y H S I+H D+KP N+++
Sbjct: 111 LVFEHVNNTDFKQ-LYQTLT-DYDIRFYM-YEILKALDYCH---SMGIMHRDVKPHNVMI 164
Query: 301 D-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTI-TAKVDVYSFGVL 358
D +H R+ D+GLA+ Q ++ A R KG PE + +D++S G +
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLVDYQMYDYSLDMWSLGCM 221
Query: 359 LLEIISCRKSF 369
L +I ++ F
Sbjct: 222 LASMIFRKEPF 232
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 11/131 (8%)
Query: 241 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILL 300
LV+E +NN L+ L +++R + ++I + L Y H S I+H D+KP N+++
Sbjct: 109 LVFEHVNNTDFKQ-LYQTLT-DYDIRFYM-YEILKALDYCH---SMGIMHRDVKPHNVMI 162
Query: 301 D-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTI-TAKVDVYSFGVL 358
D +H R+ D+GLA+ Q ++ A R KG PE + +D++S G +
Sbjct: 163 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLVDYQMYDYSLDMWSLGCM 219
Query: 359 LLEIISCRKSF 369
L +I ++ F
Sbjct: 220 LASMIFRKEPF 230
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 11/131 (8%)
Query: 241 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILL 300
LV+E +NN L+ L +++R + ++I + L Y H S I+H D+KP N+++
Sbjct: 110 LVFEHVNNTDFKQ-LYQTLT-DYDIRFYM-YEILKALDYCH---SMGIMHRDVKPHNVMI 163
Query: 301 D-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTI-TAKVDVYSFGVL 358
D +H R+ D+GLA+ Q ++ A R KG PE + +D++S G +
Sbjct: 164 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLVDYQMYDYSLDMWSLGCM 220
Query: 359 LLEIISCRKSF 369
L +I ++ F
Sbjct: 221 LASMIFRKEPF 231
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 11/131 (8%)
Query: 241 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSSQIIHCDIKPQNILL 300
LV+E +NN L+ L +++R + ++I + L Y H S I+H D+KP N+++
Sbjct: 111 LVFEHVNNTDFKQ-LYQTLT-DYDIRFYM-YEILKALDYCH---SMGIMHRDVKPHNVMI 164
Query: 301 D-DHYNARISDFGLAKLLTLNQSKTIKTAIRGTKGYVAPEWYRKSTI-TAKVDVYSFGVL 358
D +H R+ D+GLA+ Q ++ A R KG PE + +D++S G +
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLVDYQMYDYSLDMWSLGCM 221
Query: 359 LLEIISCRKSF 369
L +I ++ F
Sbjct: 222 LASMIFRKEPF 232
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,225,065
Number of Sequences: 62578
Number of extensions: 532783
Number of successful extensions: 4120
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 237
Number of HSP's that attempted gapping in prelim test: 1409
Number of HSP's gapped (non-prelim): 1161
length of query: 455
length of database: 14,973,337
effective HSP length: 102
effective length of query: 353
effective length of database: 8,590,381
effective search space: 3032404493
effective search space used: 3032404493
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)