BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037787
(163 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 125 bits (314), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 96/154 (62%), Gaps = 3/154 (1%)
Query: 2 SNKQPMNLDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKAD 61
SN L ++QIAE +E F FD++ D P+ +L+ +I + D
Sbjct: 1 SNAMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVD 60
Query: 62 TNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLG 121
+ NG ++F EF+ ++A ++ K SEE++R+ FR+FD+DGNG+I+AAEL H M LG
Sbjct: 61 ADGNGTIDFPEFLTMMARKM---KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 117
Query: 122 HELTAEELTGMIREADTDGDGRISFQEFAQAITS 155
+LT EE+ MIREAD DGDG+++++EF Q +T+
Sbjct: 118 EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 151
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 125 bits (313), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 95/149 (63%), Gaps = 3/149 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++A ++ K SEE++R+ FR+FD+DGNG+I+AAEL H M LG +LT EE
Sbjct: 65 DFPEFLTMMARKM---KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 121
Query: 129 LTGMIREADTDGDGRISFQEFAQAITSAA 157
+ MIREAD DGDG+++++EF Q +T+ A
Sbjct: 122 VDEMIREADIDGDGQVNYEEFVQMMTAKA 150
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 125 bits (313), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 93/147 (63%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L D+QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 4 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ L+A ++ K SEE+L++ FR+FD+DGNGFI+AAEL H M LG +LT EE
Sbjct: 64 DFPEFLNLMARKM---KDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 120
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ MIREAD DGDG+++++EF Q + +
Sbjct: 121 VDEMIREADVDGDGQVNYEEFVQVMMA 147
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 125 bits (313), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 93/147 (63%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L D+QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 4 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ L+A ++ K SEE+L++ FR+FD+DGNGFI+AAEL H M LG +LT EE
Sbjct: 64 DFPEFLNLMARKM---KDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 120
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ MIREAD DGDG+++++EF Q + +
Sbjct: 121 VDEMIREADVDGDGQVNYEEFVQVMMA 147
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 125 bits (313), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 93/147 (63%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L D+QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 1 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ L+A ++ K SEE+L++ FR+FD+DGNGFI+AAEL H M LG +LT EE
Sbjct: 61 DFPEFLNLMARKM---KDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 117
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ MIREAD DGDG+++++EF Q + +
Sbjct: 118 VDEMIREADVDGDGQVNYEEFVQVMMA 144
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 124 bits (310), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 94/147 (63%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++A ++ K SEE++R+ FR+FD+DGNG+I+AAEL H M LG +LT EE
Sbjct: 65 DFPEFLTMMARKM---KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 121
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ MIREAD DGDG+++++EF Q +T+
Sbjct: 122 VDQMIREADIDGDGQVNYEEFVQMMTA 148
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 124 bits (310), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 94/147 (63%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++A ++ K SEE++R+ FR+FD+DGNG+I+AAEL H M LG +LT EE
Sbjct: 65 DFPEFLTMMARKM---KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 121
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ MIREAD DGDG+++++EF Q +T+
Sbjct: 122 VDEMIREADIDGDGQVNYEEFVQMMTA 148
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 37/72 (51%)
Query: 10 DDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVE 69
D D E+RE FR FD++ + K + ++++ +I++AD + +G V
Sbjct: 79 DTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 138
Query: 70 FSEFVALVAPEL 81
+ EFV ++ +L
Sbjct: 139 YEEFVQMMTAKL 150
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 124 bits (310), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 94/147 (63%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++A ++ K SEE++R+ FR+FD+DGNG+I+AAEL H M LG +LT EE
Sbjct: 62 DFPEFLTMMARKM---KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 118
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ MIREAD DGDG+++++EF Q +T+
Sbjct: 119 VDEMIREADIDGDGQVNYEEFVQMMTA 145
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 124 bits (310), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 94/147 (63%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 6 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 65
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++A ++ K SEE++R+ FR+FD+DGNG+I+AAEL H M LG +LT EE
Sbjct: 66 DFPEFLTMMARKM---KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 122
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ MIREAD DGDG+++++EF Q +T+
Sbjct: 123 VDEMIREADIDGDGQVNYEEFVQMMTA 149
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 124 bits (310), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 94/147 (63%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++A ++ K SEE++R+ FR+FD+DGNG+I+AAEL H M LG +LT EE
Sbjct: 61 DFPEFLTMMARKM---KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 117
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ MIREAD DGDG+++++EF Q +T+
Sbjct: 118 VDEMIREADIDGDGQVNYEEFVQMMTA 144
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 124 bits (310), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 94/147 (63%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 10 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 69
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++A ++ K SEE++R+ FR+FD+DGNG+I+AAEL H M LG +LT EE
Sbjct: 70 DFPEFLTMMARKM---KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 126
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ MIREAD DGDG+++++EF Q +T+
Sbjct: 127 VDEMIREADIDGDGQVNYEEFVQMMTA 153
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 124 bits (310), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 94/147 (63%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++A ++ K SEE++R+ FR+FD+DGNG+I+AAEL H M LG +LT EE
Sbjct: 64 DFPEFLTMMARKM---KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 120
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ MIREAD DGDG+++++EF Q +T+
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVQMMTA 147
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 124 bits (310), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 94/147 (63%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++A ++ K SEE++R+ FR+FD+DGNG+I+AAEL H M LG +LT EE
Sbjct: 65 DFPEFLTMMARKM---KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 121
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ MIREAD DGDG+++++EF Q +T+
Sbjct: 122 VDEMIREADIDGDGQVNYEEFVQMMTA 148
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 124 bits (310), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 94/147 (63%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++A ++ K SEE++R+ FR+FD+DGNG+I+AAEL H M LG +LT EE
Sbjct: 64 DFPEFLTMMARKM---KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 120
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ MIREAD DGDG+++++EF Q +T+
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVQMMTA 147
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 124 bits (310), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 94/147 (63%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++A ++ K SEE++R+ FR+FD+DGNG+I+AAEL H M LG +LT EE
Sbjct: 65 DFPEFLTMMARKM---KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 121
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ MIREAD DGDG+++++EF Q +T+
Sbjct: 122 VDEMIREADIDGDGQVNYEEFVQMMTA 148
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 42/89 (47%)
Query: 10 DDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVE 69
D D E+RE FR FD++ + K + ++++ +I++AD + +G V
Sbjct: 79 DTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 138
Query: 70 FSEFVALVAPELLSSKSPYSEEQLRQLFR 98
+ EFV ++ + + +E +R R
Sbjct: 139 YEEFVQMMTAKGGGGGAAARKEVIRNKIR 167
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 123 bits (309), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 61/147 (41%), Positives = 93/147 (63%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++A ++ K SEE++R+ FR+FD+DGNGFI+AAEL H M LG +LT EE
Sbjct: 65 DFPEFLTMMARKM---KDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 121
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ MIREAD DGDG+++++EF +TS
Sbjct: 122 VDEMIREADIDGDGQVNYEEFVTMMTS 148
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 123 bits (309), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 61/147 (41%), Positives = 93/147 (63%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++A ++ K SEE++R+ FR+FD+DGNGFI+AAEL H M LG +LT EE
Sbjct: 64 DFPEFLTMMARKM---KDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 120
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ MIREAD DGDG+++++EF +TS
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVTMMTS 147
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 123 bits (308), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 94/147 (63%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 306 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 365
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++A ++ K SEE++R+ FR+FD+DGNG+I+AAEL H M LG +LT EE
Sbjct: 366 DFPEFLTMMARKM---KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 422
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ MIREAD DGDG+++++EF Q +T+
Sbjct: 423 VDEMIREADIDGDGQVNYEEFVQMMTA 449
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 123 bits (308), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 94/147 (63%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++A ++ K SEE++R+ FR+FD+DGNG+I+AAEL H M LG +LT EE
Sbjct: 365 DFPEFLTMMARKM---KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 421
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ MIREAD DGDG+++++EF Q +T+
Sbjct: 422 VDEMIREADIDGDGQVNYEEFVQMMTA 448
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 123 bits (308), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 93/147 (63%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++A ++ K SEE++R+ FR+FD+DGNG+I+AAEL H M LG LT EE
Sbjct: 65 DFPEFLTMMARKM---KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEE 121
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ MIREAD DGDG+++++EF Q +T+
Sbjct: 122 VDEMIREADIDGDGQVNYEEFVQMMTA 148
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 123 bits (308), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 93/147 (63%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++A ++ K SEE++R+ FR+FD+DGNG+I+AAEL H M LG LT EE
Sbjct: 64 DFPEFLTMMARKM---KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEE 120
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ MIREAD DGDG+++++EF Q +T+
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVQMMTA 147
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 123 bits (308), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 93/146 (63%), Gaps = 3/146 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 3 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 62
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++A ++ K SEE++R+ FR+FD+DGNG+I+AAEL H M LG +LT EE
Sbjct: 63 DFPEFLTMMARKM---KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 119
Query: 129 LTGMIREADTDGDGRISFQEFAQAIT 154
+ MIREAD DGDG+++++EF Q +T
Sbjct: 120 VDEMIREADIDGDGQVNYEEFVQMMT 145
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 40/107 (37%), Gaps = 40/107 (37%)
Query: 89 SEEQL---RQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTD------ 139
+EEQ+ ++ F +FD+DG+G IT EL M LG T EL MI E D D
Sbjct: 4 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 63
Query: 140 -------------------------------GDGRISFQEFAQAITS 155
G+G IS E +T+
Sbjct: 64 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 110
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 123 bits (308), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 94/147 (63%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++A ++ K SEE++R+ FR+FD+DGNG+I+AAEL H M LG +LT EE
Sbjct: 365 DFPEFLTMMARKM---KYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 421
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ MIREAD DGDG+++++EF Q +T+
Sbjct: 422 VDEMIREADIDGDGQVNYEEFVQMMTA 448
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 123 bits (308), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 94/147 (63%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++A ++ K SEE++R+ FR+FD+DGNG+I+AAEL H M LG +LT EE
Sbjct: 365 DFPEFLTMMARKM---KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 421
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ MIREAD DGDG+++++EF Q +T+
Sbjct: 422 VDEMIREADIDGDGQVNYEEFVQMMTA 448
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 123 bits (308), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 93/146 (63%), Gaps = 3/146 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++A ++ K SEE++R+ FR+FD+DGNG+I+AAEL H M LG +LT EE
Sbjct: 62 DFPEFLTMMARKM---KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 118
Query: 129 LTGMIREADTDGDGRISFQEFAQAIT 154
+ MIREAD DGDG+++++EF Q +T
Sbjct: 119 VDEMIREADIDGDGQVNYEEFVQMMT 144
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 40/107 (37%), Gaps = 40/107 (37%)
Query: 89 SEEQL---RQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTD------ 139
+EEQ+ ++ F +FD+DG+G IT EL M LG T EL MI E D D
Sbjct: 3 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 62
Query: 140 -------------------------------GDGRISFQEFAQAITS 155
G+G IS E +T+
Sbjct: 63 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 109
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 123 bits (308), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 94/147 (63%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 330
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++A ++ K SEE++R+ FR+FD+DGNG+I+AAEL H M LG +LT EE
Sbjct: 331 DFPEFLTMMARKM---KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 387
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ MIREAD DGDG+++++EF Q +T+
Sbjct: 388 VDEMIREADIDGDGQVNYEEFVQMMTA 414
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 123 bits (308), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 94/147 (63%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 268 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 327
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++A ++ K SEE++R+ FR+FD+DGNG+I+AAEL H M LG +LT EE
Sbjct: 328 DFPEFLTMMARKM---KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 384
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ MIREAD DGDG+++++EF Q +T+
Sbjct: 385 VDEMIREADIDGDGQVNYEEFVQMMTA 411
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 123 bits (308), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 94/147 (63%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 330
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++A ++ K SEE++R+ FR+FD+DGNG+I+AAEL H M LG +LT EE
Sbjct: 331 DFPEFLTMMARKM---KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 387
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ MIREAD DGDG+++++EF Q +T+
Sbjct: 388 VDEMIREADIDGDGQVNYEEFVQMMTA 414
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 122 bits (307), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 93/145 (64%), Gaps = 3/145 (2%)
Query: 11 DDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEF 70
++QIAE +E F FD++ D P+ +L+ +I + D + NG ++F
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 63
Query: 71 SEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELT 130
EF+ ++A ++ K SEE++R+ FR+FD+DGNG+I+AAEL H M LG +LT EE+
Sbjct: 64 PEFLTMMARKM---KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 120
Query: 131 GMIREADTDGDGRISFQEFAQAITS 155
MIREAD DGDG+++++EF Q +T+
Sbjct: 121 EMIREADIDGDGQVNYEEFVQMMTA 145
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%)
Query: 10 DDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVE 69
D D E+RE FR FD++ + K + ++++ +I++AD + +G V
Sbjct: 76 DTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 135
Query: 70 FSEFVALV 77
+ EFV ++
Sbjct: 136 YEEFVQMM 143
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 122 bits (307), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 93/145 (64%), Gaps = 3/145 (2%)
Query: 11 DDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEF 70
++QIAE +E F FD++ D P+ +L+ +I + D + NG ++F
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 61
Query: 71 SEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELT 130
EF+ ++A ++ K SEE++R+ FR+FD+DGNG+I+AAEL H M LG +LT EE+
Sbjct: 62 PEFLTMMARKM---KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 118
Query: 131 GMIREADTDGDGRISFQEFAQAITS 155
MIREAD DGDG+++++EF Q +T+
Sbjct: 119 EMIREADIDGDGQVNYEEFVQMMTA 143
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 35/69 (50%)
Query: 10 DDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVE 69
D D E+RE FR FD++ + K + ++++ +I++AD + +G V
Sbjct: 74 DTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 133
Query: 70 FSEFVALVA 78
+ EFV ++
Sbjct: 134 YEEFVQMMT 142
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 122 bits (307), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 93/147 (63%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++A ++ K SEE++R+ FR+FD+DGNGFI+AAEL H M LG +LT EE
Sbjct: 65 DFPEFLTMMARKM---KDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 121
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ MIREAD DGDG+++++EF +T+
Sbjct: 122 VDEMIREADIDGDGQVNYEEFVTMMTT 148
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 122 bits (306), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 95/150 (63%), Gaps = 3/150 (2%)
Query: 6 PMNLDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSN 65
P L ++QIAE +E F FD++ D P+ +L+ +I + D + +
Sbjct: 301 PDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 360
Query: 66 GLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELT 125
G ++F EF+ ++A ++ K SEE++R+ FR+FD+DGNG+I+AAEL H M LG +LT
Sbjct: 361 GTIDFPEFLTMMARKM---KYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 417
Query: 126 AEELTGMIREADTDGDGRISFQEFAQAITS 155
EE+ MIREAD DGDG+++++EF Q +T+
Sbjct: 418 DEEVDEMIREADIDGDGQVNYEEFVQMMTA 447
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 122 bits (306), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 93/147 (63%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++A ++ K SEE++R+ FR+FD+DGNGFI+AAEL H M LG +LT EE
Sbjct: 65 DFPEFLTMMARKM---KDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 121
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ MIRE+D DGDG+++++EF +TS
Sbjct: 122 VDEMIRESDIDGDGQVNYEEFVTMMTS 148
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 122 bits (306), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 93/147 (63%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++A ++ K SEE++R+ FR+FD+DGNGFI+AAEL H M LG +LT EE
Sbjct: 64 DFPEFLTMMARKM---KDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 120
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ MIREAD DGDG+++++EF +T+
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVTMMTA 147
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 122 bits (306), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 95/150 (63%), Gaps = 3/150 (2%)
Query: 6 PMNLDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSN 65
P L ++QIAE +E F FD++ D P+ +L+ +I + D + +
Sbjct: 301 PDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 360
Query: 66 GLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELT 125
G ++F EF+ ++A ++ K SEE++R+ FR+FD+DGNG+I+AAEL H M LG +LT
Sbjct: 361 GTIDFPEFLTMMARKM---KYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 417
Query: 126 AEELTGMIREADTDGDGRISFQEFAQAITS 155
EE+ MIREAD DGDG+++++EF Q +T+
Sbjct: 418 DEEVDEMIREADIDGDGQVNYEEFVQMMTA 447
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 122 bits (305), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 93/147 (63%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++A + K SEE++R+ FR+FD+DGNG+I+AAEL H M LG +LT EE
Sbjct: 365 DFPEFLTMMARWM---KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 421
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ MIREAD DGDG+++++EF Q +T+
Sbjct: 422 VDEMIREADIDGDGQVNYEEFVQMMTA 448
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 122 bits (305), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 94/147 (63%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++A ++ K SEE++R+ FR+FD+DGNG+I+AAEL H M LG +LT EE
Sbjct: 64 DFPEFLTMMARKM---KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 120
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ MIREA+ DGDG+++++EF Q +T+
Sbjct: 121 VDEMIREANIDGDGQVNYEEFVQMMTA 147
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 121 bits (304), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 94/147 (63%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + +G +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 63
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++A ++ K SEE++R+ FR+FD+DGNG+I+AAEL H M LG +LT EE
Sbjct: 64 DFPEFLTMMARKM---KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 120
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ MIREAD DGDG+++++EF Q +T+
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVQMMTA 147
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 121 bits (304), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/147 (41%), Positives = 91/147 (61%), Gaps = 5/147 (3%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++A K SEE++R+ FR+FD+DGNGFI+AAEL H M LG +LT EE
Sbjct: 64 DFPEFLTMMA-----RKMKDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 118
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ MIREAD DGDG+++++EF +TS
Sbjct: 119 VDEMIREADIDGDGQVNYEEFVTMMTS 145
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 121 bits (304), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 94/147 (63%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + +G +
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++A ++ K SEE++R+ FR+FD+DGNG+I+AAEL H M LG +LT EE
Sbjct: 364 DFPEFLTMMARKM---KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 420
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ MIREAD DGDG+++++EF Q +T+
Sbjct: 421 VDEMIREADIDGDGQVNYEEFVQMMTA 447
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 121 bits (303), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 94/147 (63%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + +G +
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 364
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++A ++ K SEE++R+ FR+FD+DGNG+I+AAEL H M LG +LT EE
Sbjct: 365 DFPEFLTMMARKM---KYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 421
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ MIREAD DGDG+++++EF Q +T+
Sbjct: 422 VDEMIREADIDGDGQVNYEEFVQMMTA 448
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 121 bits (303), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/147 (41%), Positives = 92/147 (62%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L DDQI+E +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ L+A ++ K SEE+L++ FR+FD+D NGFI+AAEL H M LG +LT EE
Sbjct: 65 DFPEFLNLMARKM---KDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ MIREAD DGDG+I+++EF + + +
Sbjct: 122 VDEMIREADVDGDGQINYEEFVKVMMA 148
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 120 bits (302), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 94/147 (63%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + +G +
Sbjct: 296 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 355
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++A ++ K SEE++R+ FR+FD+DGNG+I+AAEL H M LG +LT EE
Sbjct: 356 DFPEFLIMMARKM---KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 412
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ MIREAD DGDG+++++EF Q +T+
Sbjct: 413 VDEMIREADIDGDGQVNYEEFVQMMTA 439
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 118 bits (295), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 91/147 (61%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L +DQI+E +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 5 LTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ L+A ++ K SEE+L++ FR+FD+D NGFI+AAEL H M LG +LT EE
Sbjct: 65 DFPEFLNLMARKM---KDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ MIREAD DGDG+I++ EF + + +
Sbjct: 122 VDEMIREADVDGDGQINYDEFVKVMMA 148
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 117 bits (294), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 92/145 (63%), Gaps = 4/145 (2%)
Query: 11 DDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEF 70
++QIAE +E F FD++ D P+ +L+ +I + D + NG ++F
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 61
Query: 71 SEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELT 130
EF+ ++A ++ + S E++R+ FR+FD+DGNG+I+AAEL H M LG +LT EE+
Sbjct: 62 PEFLTMMARKMKDTDS----EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 117
Query: 131 GMIREADTDGDGRISFQEFAQAITS 155
MIREA+ DGDG+++++EF Q +T+
Sbjct: 118 EMIREANIDGDGQVNYEEFVQMMTA 142
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 117 bits (292), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 91/147 (61%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 4 LTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF++L+A ++ K SEE+L + F++FDRDGNG I+AAEL H M LG +LT +E
Sbjct: 64 DFPEFLSLMARKM---KEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDE 120
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ MIREAD DGDG I+++EF + + S
Sbjct: 121 VDEMIREADIDGDGHINYEEFVRMMVS 147
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 117 bits (292), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 91/147 (61%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 4 LTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF++L+A ++ K SEE+L + F++FDRDGNG I+AAEL H M LG +LT +E
Sbjct: 64 DFPEFLSLMARKM---KEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDE 120
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ MIREAD DGDG I+++EF + + S
Sbjct: 121 VDEMIREADIDGDGHINYEEFVRMMVS 147
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 115 bits (288), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 92/147 (62%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++Q+ E +E F FD++ D P+ +L ++ + D + NG V
Sbjct: 4 LTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTV 63
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++A ++ K +EE++R+ FR+FD+DGNGF++AAEL H M +LG +L+ EE
Sbjct: 64 DFPEFLGMMARKM---KDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEE 120
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ MIR ADTDGDG+++++EF + + S
Sbjct: 121 VDEMIRAADTDGDGQVNYEEFVRVLVS 147
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 112 bits (281), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 93/148 (62%), Gaps = 3/148 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QI + +E F FD++ D P+ ++L+ +I + D + NG +
Sbjct: 4 LSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTI 63
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
EF EF++L+A ++ K +EE+L++ F++FD+D NG+I+A+EL H M LG +LT EE
Sbjct: 64 EFDEFLSLMAKKV---KDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEE 120
Query: 129 LTGMIREADTDGDGRISFQEFAQAITSA 156
+ MI+EAD DGDG+++++EF + + +
Sbjct: 121 VEQMIKEADLDGDGQVNYEEFVKMMMTV 148
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 112 bits (280), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 87/147 (59%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ I + D + NG +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTI 64
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ A K SEE++R+ FR+FD+DGNG+I+AAEL H LG +LT EE
Sbjct: 65 DFPEFLTXXAR---KXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEE 121
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ IREAD DGDG+++++EF Q T+
Sbjct: 122 VDQXIREADIDGDGQVNYEEFVQXXTA 148
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 112 bits (280), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 87/147 (59%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ I + D + NG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTI 63
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ A K SEE++R+ FR+FD+DGNG+I+AAEL H LG +LT EE
Sbjct: 64 DFPEFLTXXAR---KXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEE 120
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ IREAD DGDG+++++EF Q T+
Sbjct: 121 VDEXIREADIDGDGQVNYEEFVQXXTA 147
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 112 bits (279), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 86/147 (58%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ I + D + NG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTI 63
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
F EF+ A K SEE++R+ FR+FD+DGNG+I+AAEL H LG +LT EE
Sbjct: 64 NFPEFLTXXAR---CXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEE 120
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ IREAD DGDG+++++EF Q T+
Sbjct: 121 VDEXIREADIDGDGQVNYEEFVQXXTA 147
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 112 bits (279), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 91/147 (61%), Gaps = 3/147 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + + NG +
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTI 364
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F +F+ ++A ++ K SEE++R+ FR+F +DGNG+I+AA+L H M LG +LT EE
Sbjct: 365 DFPQFLTMMARKM---KDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEE 421
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ MIREA DGDG++++++F Q +T+
Sbjct: 422 VDEMIREAGIDGDGQVNYEQFVQMMTA 448
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 106 bits (265), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 88/146 (60%), Gaps = 3/146 (2%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE ++ F FD+ P+ +L+ LI +A+ N+NG +
Sbjct: 4 LTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQL 63
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
F+EF ++A ++ + +EE++R+ F++FDRDG+GFI+ AEL M LG ++T EE
Sbjct: 64 NFTEFCGIMAKQM---RETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEE 120
Query: 129 LTGMIREADTDGDGRISFQEFAQAIT 154
+ MIREAD DGDG I+++EF I+
Sbjct: 121 IDEMIREADFDGDGMINYEEFVWMIS 146
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 100 bits (248), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 89/147 (60%), Gaps = 4/147 (2%)
Query: 8 NLDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGL 67
NL ++QIAE +E F FD++N+ PS ++ L+ + D + N
Sbjct: 3 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ 62
Query: 68 VEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAE 127
+EFSEF+AL++ +L KS SE++L + F++FD++G+G I+AAEL H + +G +LT
Sbjct: 63 IEFSEFLALMSRQL---KSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDA 119
Query: 128 ELTGMIREADTDGDGRISFQEFAQAIT 154
E+ M+RE +DG G I+ Q+FA ++
Sbjct: 120 EVDDMLREV-SDGSGEINIQQFAALLS 145
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 100 bits (248), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 90/150 (60%), Gaps = 4/150 (2%)
Query: 8 NLDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGL 67
NL ++QIAE +E F FD++N+ PS ++ L+ + D + N
Sbjct: 4 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ 63
Query: 68 VEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAE 127
+EFSEF+AL++ +L KS SE++L + F++FD++G+G I+AAEL H + +G +LT
Sbjct: 64 IEFSEFLALMSRQL---KSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDA 120
Query: 128 ELTGMIREADTDGDGRISFQEFAQAITSAA 157
E+ M+RE +DG G I+ Q+FA ++ +
Sbjct: 121 EVDDMLREV-SDGSGEINIQQFAALLSKGS 149
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 96.7 bits (239), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 87/147 (59%), Gaps = 4/147 (2%)
Query: 8 NLDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGL 67
NL ++QIAE +E F FD++N PS ++ L+ + D + N
Sbjct: 4 NLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHA 63
Query: 68 VEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAE 127
+EFSEF+AL++ +L K SE++L + F++FD++G+G I+AAEL H + +G +LT
Sbjct: 64 IEFSEFLALMSRQL---KCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDA 120
Query: 128 ELTGMIREADTDGDGRISFQEFAQAIT 154
E+ M+RE +DG G I+ ++FA ++
Sbjct: 121 EVDEMLREV-SDGSGEINIKQFAALLS 146
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 56/71 (78%)
Query: 85 KSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRI 144
K SEE++R+ FR+FD+DGNG+I+AAEL H M LG +LT EE+ MIREAD DGDG++
Sbjct: 3 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 62
Query: 145 SFQEFAQAITS 155
+++EF Q +T+
Sbjct: 63 NYEEFVQMMTA 73
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 35/70 (50%)
Query: 10 DDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVE 69
D D E+RE FR FD++ + K + ++++ +I++AD + +G V
Sbjct: 4 DTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 63
Query: 70 FSEFVALVAP 79
+ EFV ++
Sbjct: 64 YEEFVQMMTA 73
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 91.3 bits (225), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 56/71 (78%)
Query: 85 KSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRI 144
K SEE++R+ FR+FD+DGNG+I+AAEL H M LG +LT EE+ MIREAD DGDG++
Sbjct: 2 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 61
Query: 145 SFQEFAQAITS 155
+++EF Q +T+
Sbjct: 62 NYEEFVQMMTA 72
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 35/70 (50%)
Query: 10 DDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVE 69
D D E+RE FR FD++ + K + ++++ +I++AD + +G V
Sbjct: 3 DTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 62
Query: 70 FSEFVALVAP 79
+ EFV ++
Sbjct: 63 YEEFVQMMTA 72
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 55/67 (82%)
Query: 89 SEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQE 148
SEE++R+ FR+FD+DGNG+I+AAEL H M LG +LT EE+ MIREAD DGDG+++++E
Sbjct: 4 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 63
Query: 149 FAQAITS 155
F Q +T+
Sbjct: 64 FVQMMTA 70
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 35/70 (50%)
Query: 10 DDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVE 69
D D E+RE FR FD++ + K + ++++ +I++AD + +G V
Sbjct: 1 DTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 60
Query: 70 FSEFVALVAP 79
+ EFV ++
Sbjct: 61 YEEFVQMMTA 70
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 90.5 bits (223), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 55/67 (82%)
Query: 89 SEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQE 148
SEE++R+ FR+FD+DGNG+I+AAEL H M LG +LT EE+ MIREAD DGDG+++++E
Sbjct: 3 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 62
Query: 149 FAQAITS 155
F Q +T+
Sbjct: 63 FVQMMTA 69
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 33/64 (51%)
Query: 16 ELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSEFVA 75
E+RE FR FD++ + K + ++++ +I++AD + +G V + EFV
Sbjct: 6 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 65
Query: 76 LVAP 79
++
Sbjct: 66 MMTA 69
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 90.1 bits (222), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 88/154 (57%), Gaps = 2/154 (1%)
Query: 3 NKQPMNLDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADT 62
+++ +L ++I ELRE FR FD++ D P+ +L L Q+ +
Sbjct: 13 SRKDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINM 72
Query: 63 NSNGLVEFSEFVALVAPELLSSKSP-YSEEQLRQLFRMFDRDGNGFITAAELAHSMAKL- 120
N G V+F +FV L+ P+LL+ + ++LR FR FD +G+G I+ +EL +M KL
Sbjct: 73 NLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLL 132
Query: 121 GHELTAEELTGMIREADTDGDGRISFQEFAQAIT 154
GH++ ++ +IR+ D +GDGR+ F+EF + ++
Sbjct: 133 GHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 166
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 90.1 bits (222), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 12 DQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFS 71
++I ELRE FR FD++ D P+ +L L Q+ + N G V+F
Sbjct: 8 EEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFD 67
Query: 72 EFVALVAPELLSSKSPY-SEEQLRQLFRMFDRDGNGFITAAELAHSMAKL-GHELTAEEL 129
+FV L+ P+LL+ + ++LR FR FD +G+G I+ +EL +M KL GH++ ++
Sbjct: 68 DFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDI 127
Query: 130 TGMIREADTDGDGRISFQEFAQAIT 154
+IR+ D +GDGR+ F+EF + ++
Sbjct: 128 EEIIRDVDLNGDGRVDFEEFVRMMS 152
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%)
Query: 84 SKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGR 143
S P E+LR+ FR FD+D +G+I +L + M +G+ T EL + ++ + + G
Sbjct: 4 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGH 63
Query: 144 ISFQEFAQAI 153
+ F +F + +
Sbjct: 64 VDFDDFVELM 73
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 12 DQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFS 71
++I ELRE FR FD++ D P+ +L L Q+ + N G V+F
Sbjct: 8 EEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFD 67
Query: 72 EFVALVAPELLSSKSP-YSEEQLRQLFRMFDRDGNGFITAAELAHSM-AKLGHELTAEEL 129
+FV L+ P+LL+ + ++LR FR FD +G+G I+ +EL +M A LGH++ ++
Sbjct: 68 DFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDI 127
Query: 130 TGMIREADTDGDGRISFQEFAQAIT 154
+IR+ D +GDGR+ F+EF + ++
Sbjct: 128 EEIIRDVDLNGDGRVDFEEFVRMMS 152
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%)
Query: 84 SKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGR 143
S P E+LR+ FR FD+D +G+I +L + M +G+ T EL + ++ + + G
Sbjct: 4 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGH 63
Query: 144 ISFQEFAQAI 153
+ F +F + +
Sbjct: 64 VDFDDFVELM 73
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 88.6 bits (218), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 54/66 (81%)
Query: 90 EEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEF 149
EE++R+ FR+FD+DGNG+I+AAEL H M LG +LT EE+ MIREAD DGDG+++++EF
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 60
Query: 150 AQAITS 155
Q +T+
Sbjct: 61 VQMMTA 66
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 33/64 (51%)
Query: 16 ELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSEFVA 75
E+RE FR FD++ + K + ++++ +I++AD + +G V + EFV
Sbjct: 3 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 62
Query: 76 LVAP 79
++
Sbjct: 63 MMTA 66
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 53/65 (81%)
Query: 89 SEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQE 148
SEE++R+ FR+FD+DGNG+I+AAEL H M LG +LT EE+ MIREAD DGDG+++++E
Sbjct: 3 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 62
Query: 149 FAQAI 153
F Q +
Sbjct: 63 FVQMM 67
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 33/62 (53%)
Query: 16 ELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSEFVA 75
E+RE FR FD++ + K + ++++ +I++AD + +G V + EFV
Sbjct: 6 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 65
Query: 76 LV 77
++
Sbjct: 66 MM 67
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 55/67 (82%)
Query: 89 SEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQE 148
SEE++R+ FR+FD+DGNG+I+AA+L H M LG +LT EE+ MIREAD DGDG++++++
Sbjct: 5 SEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYED 64
Query: 149 FAQAITS 155
F Q +T+
Sbjct: 65 FVQMMTA 71
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 37/72 (51%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
+D D E+RE FR FD++ + K + ++++ +I++AD + +G V
Sbjct: 1 MDTDSEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 60
Query: 69 EFSEFVALVAPE 80
+ +FV ++ +
Sbjct: 61 NYEDFVQMMTAK 72
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 87.4 bits (215), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 55/71 (77%)
Query: 85 KSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRI 144
K SEE++R+ FR+ D+DGNG+I+AAEL H M LG +LT EE+ MIREAD DGDG++
Sbjct: 23 KDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 82
Query: 145 SFQEFAQAITS 155
+++EF Q +T+
Sbjct: 83 NYEEFVQMMTA 93
Score = 33.1 bits (74), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 36/75 (48%)
Query: 5 QPMNLDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNS 64
Q + D D E+RE FR D++ + K + ++++ +I++AD +
Sbjct: 19 QSLMKDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 78
Query: 65 NGLVEFSEFVALVAP 79
+G V + EFV ++
Sbjct: 79 DGQVNYEEFVQMMTA 93
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 85.9 bits (211), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 53/67 (79%)
Query: 89 SEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQE 148
SEE+L++ FR+FD+D NGFI+AAEL H M LG +LT EE+ MIREAD DGDG+I+++E
Sbjct: 2 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 61
Query: 149 FAQAITS 155
F + + +
Sbjct: 62 FVKVMMA 68
Score = 33.5 bits (75), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 33/62 (53%)
Query: 16 ELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSEFVA 75
EL+E FR FD++ + K + ++++ +I++AD + +G + + EFV
Sbjct: 5 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 64
Query: 76 LV 77
++
Sbjct: 65 VM 66
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 78/145 (53%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++ IAE + F FD + P+ ++L+ +I++ D + +G +
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 70
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++ ++ SEE+L +LFR+FDR+ +G+I A ELA G +T EE
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEE 130
Query: 129 LTGMIREADTDGDGRISFQEFAQAI 153
+ ++++ D + DGRI F EF + +
Sbjct: 131 IESLMKDGDKNNDGRIDFDEFLKMM 155
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 77/145 (53%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++ IAE + F FD + P+ ++L+ +I++ D + +G +
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 70
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++ ++ SEE+L + FR+FDR+ +G+I A ELA G +T EE
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEE 130
Query: 129 LTGMIREADTDGDGRISFQEFAQAI 153
+ ++++ D + DGRI F EF + +
Sbjct: 131 IESLMKDGDKNNDGRIDFDEFLKMM 155
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 84.0 bits (206), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 52/71 (73%)
Query: 85 KSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRI 144
K SEE+L + F++FDRDGNG I+AAEL H M LG +LT +E+ MIREAD DGDG I
Sbjct: 2 KEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHI 61
Query: 145 SFQEFAQAITS 155
+++EF + + S
Sbjct: 62 NYEEFVRMMVS 72
Score = 33.9 bits (76), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 32/64 (50%)
Query: 16 ELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSEFVA 75
EL E F+ FDR+ + K + D+++ +I++AD + +G + + EFV
Sbjct: 9 ELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVR 68
Query: 76 LVAP 79
++
Sbjct: 69 MMVS 72
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 83.6 bits (205), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 8 NLDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGL 67
NL ++QIAE +E F FD++N+ PS ++ L+ + D + N
Sbjct: 3 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ 62
Query: 68 VEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAE 127
+EFSEF+AL++ +L KS SE++L + F++FD++G+G I+AAEL H + +G +LT
Sbjct: 63 IEFSEFLALMSRQL---KSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDA 119
Query: 128 EL 129
EL
Sbjct: 120 EL 121
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 86 SPYSEEQL---RQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDG 142
S +EEQ+ ++ F +FD+D NG I+++ELA M LG + E+ ++ E D DG+
Sbjct: 2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNH 61
Query: 143 RISFQEF 149
+I F EF
Sbjct: 62 QIEFSEF 68
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 80.5 bits (197), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 76/145 (52%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++ IAE + F FD + P+ ++L+ +I++ D + +G +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++ ++ SEE+L FR+FD++ +GFI EL + G +T E+
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 129 LTGMIREADTDGDGRISFQEFAQAI 153
+ +++++D + DGRI F EF + +
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMM 158
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 76/145 (52%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++ IAE + F FD + P+ ++L+ +I++ D + +G +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++ ++ SEE+L FR+FD++ +GFI EL + G +T E+
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 129 LTGMIREADTDGDGRISFQEFAQAI 153
+ +++++D + DGRI F EF + +
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMM 158
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 76/145 (52%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++ IAE + F FD + P+ ++L+ +I++ D + +G +
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 70
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++ ++ SEE+L FR+FD++ +GFI EL + G +T E+
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 130
Query: 129 LTGMIREADTDGDGRISFQEFAQAI 153
+ +++++D + DGRI F EF + +
Sbjct: 131 IEDLMKDSDKNNDGRIDFDEFLKMM 155
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 80.1 bits (196), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 76/145 (52%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++ IAE + F FD + P+ ++L+ +I++ D + +G +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++ ++ SEE+L FR+FD++ +GFI EL + G +T E+
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 129 LTGMIREADTDGDGRISFQEFAQAI 153
+ +++++D + DGRI F EF + +
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMM 158
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 53/68 (77%)
Query: 89 SEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQE 148
+EE+L++ F++FD+D NG+I+A+EL H M LG +LT EE+ MI+EAD DGDG+++++E
Sbjct: 2 AEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEE 61
Query: 149 FAQAITSA 156
F + + +
Sbjct: 62 FVKMMMTV 69
Score = 34.7 bits (78), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 33/62 (53%)
Query: 16 ELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSEFVA 75
EL+E F+ FD++ + K + +++E +I++AD + +G V + EFV
Sbjct: 5 ELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVK 64
Query: 76 LV 77
++
Sbjct: 65 MM 66
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 75/145 (51%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++ IAE + F FD + P+ ++L+ +I++ D + +G +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F EF+ ++ ++ SEE+L FR+FD++ +GFI EL + G + E+
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEED 133
Query: 129 LTGMIREADTDGDGRISFQEFAQAI 153
+ +++++D + DGRI F EF + +
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMM 158
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 53/68 (77%)
Query: 89 SEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQE 148
+EE+L++ F++FD+D NG+I+A+EL H M LG +LT EE+ MI+EAD DGDG+++++E
Sbjct: 7 AEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEE 66
Query: 149 FAQAITSA 156
F + + +
Sbjct: 67 FVKMMMTV 74
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 37/70 (52%)
Query: 8 NLDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGL 67
++D D EL+E F+ FD++ + K + +++E +I++AD + +G
Sbjct: 2 HMDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQ 61
Query: 68 VEFSEFVALV 77
V + EFV ++
Sbjct: 62 VNYEEFVKMM 71
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 63/104 (60%)
Query: 48 PSPDQLETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGF 107
P+P++L+ +I + D + +G V+F EF+ ++ + SEE+L LFRMFD++ +G+
Sbjct: 52 PTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGY 111
Query: 108 ITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQ 151
I EL + G +T +++ ++++ D + DGRI + EF +
Sbjct: 112 IDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 155
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 29/57 (50%)
Query: 105 NGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAITSAAFDNS 161
+G I+ EL M LG T EEL MI E D DG G + F EF + + D+S
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDS 89
Score = 33.9 bits (76), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 16 ELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSEFVA 75
EL ++FR FD+N D + D +E L++ D N++G +++ EF+
Sbjct: 96 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 155
Query: 76 LV 77
+
Sbjct: 156 FM 157
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 63/104 (60%)
Query: 48 PSPDQLETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGF 107
P+P++L+ +I + D + +G V+F EF+ ++ + +EE+L LFRMFD++ +G+
Sbjct: 52 PTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKTEEELSDLFRMFDKNADGY 111
Query: 108 ITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQ 151
I EL + G +T +++ ++++ D + DGRI + EF +
Sbjct: 112 IDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 155
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 29/57 (50%)
Query: 105 NGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAITSAAFDNS 161
+G I+ EL M LG T EEL MI E D DG G + F EF + + D+S
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDS 89
Score = 33.9 bits (76), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 16 ELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSEFVA 75
EL ++FR FD+N D + D +E L++ D N++G +++ EF+
Sbjct: 96 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 155
Query: 76 LV 77
+
Sbjct: 156 FM 157
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 76.3 bits (186), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 63/104 (60%)
Query: 48 PSPDQLETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGF 107
P+P++L+ +I + D + +G V+F EF+ ++ + +EE+L LFRMFD++ +G+
Sbjct: 52 PTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGY 111
Query: 108 ITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQ 151
I EL + G +T +++ ++++ D + DGRI + EF +
Sbjct: 112 IDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 155
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 28/57 (49%)
Query: 105 NGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAITSAAFDNS 161
+G I+ EL M LG T EEL MI E D DG G + F EF + D+S
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDS 89
Score = 33.9 bits (76), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 16 ELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSEFVA 75
EL ++FR FD+N D + D +E L++ D N++G +++ EF+
Sbjct: 96 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 155
Query: 76 LV 77
+
Sbjct: 156 FM 157
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 63/104 (60%)
Query: 48 PSPDQLETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGF 107
P+P++L+ +I + D + +G V+F EF+ ++ + SEE+L LFRM+D++ +G+
Sbjct: 52 PTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMWDKNADGY 111
Query: 108 ITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQ 151
I EL + G +T +++ ++++ D + DGRI + EF +
Sbjct: 112 IDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 155
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 29/57 (50%)
Query: 105 NGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAITSAAFDNS 161
+G I+ EL M LG T EEL MI E D DG G + F EF + + D+S
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDS 89
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 63/104 (60%)
Query: 48 PSPDQLETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGF 107
P+P++L+ +I + D + +G V+F EF+ ++ + SEE+L LFRMFD++ +G+
Sbjct: 52 PTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGY 111
Query: 108 ITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQ 151
I EL + G +T +++ ++++ D + DGRI + E+ +
Sbjct: 112 IDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEWLE 155
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 29/57 (50%)
Query: 105 NGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAITSAAFDNS 161
+G I+ EL M LG T EEL MI E D DG G + F EF + + D+S
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDS 89
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 30/62 (48%)
Query: 16 ELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSEFVA 75
EL ++FR FD+N D + D +E L++ D N++G +++ E++
Sbjct: 96 ELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEWLE 155
Query: 76 LV 77
+
Sbjct: 156 FM 157
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 61/101 (60%)
Query: 48 PSPDQLETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGF 107
P+P++L+ +I + D + +G V+F EF+ ++ + SEE+L LFRMFD++ +G+
Sbjct: 52 PTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGY 111
Query: 108 ITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQE 148
I EL + G +T +++ ++++ D + DGRI + E
Sbjct: 112 IDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 29/57 (50%)
Query: 105 NGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAITSAAFDNS 161
+G I+ EL M LG T EEL MI E D DG G + F EF + + D+S
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDS 89
Score = 30.8 bits (68), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 16 ELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSE 72
EL ++FR FD+N D + D +E L++ D N++G +++ E
Sbjct: 96 ELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 62/104 (59%)
Query: 48 PSPDQLETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGF 107
P+P++L+ +I + D + +G V+F EF+ ++ + SEE+L LFRM D++ +G+
Sbjct: 52 PTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMXDKNADGY 111
Query: 108 ITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQ 151
I EL + G +T +++ ++++ D + DGRI + EF +
Sbjct: 112 IDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 155
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 29/57 (50%)
Query: 105 NGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAITSAAFDNS 161
+G I+ EL M LG T EEL MI E D DG G + F EF + + D+S
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDS 89
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 70.1 bits (170), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 50/70 (71%), Gaps = 3/70 (4%)
Query: 52 QLETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAA 111
+L+ +I + D + NG ++F EF+ ++A ++ K SEE++R+ FR+FD+DGNG+I+AA
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMARKM---KDTDSEEEIREAFRVFDKDGNGYISAA 58
Query: 112 ELAHSMAKLG 121
EL H M LG
Sbjct: 59 ELRHVMTNLG 68
Score = 30.8 bits (68), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 92 QLRQLFRMFDRDGNGFITAAELAHSMA-KLGHELTAEELTGMIREADTDGDGRISFQEFA 150
+L+ + D DGNG I E MA K+ + EE+ R D DG+G IS E
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 61
Query: 151 QAITS 155
+T+
Sbjct: 62 HVMTN 66
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 69.3 bits (168), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 44/65 (67%)
Query: 91 EQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFA 150
E L+ FR FD+DG+G IT EL +MA LG L EEL MIREAD D DGR++++EFA
Sbjct: 6 EDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFA 65
Query: 151 QAITS 155
+ +
Sbjct: 66 RMLAQ 70
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 8 NLDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGL 67
L+D Q+A FR+FD++ D ++L+ +I++AD + +G
Sbjct: 4 GLEDLQVA-----FRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGR 58
Query: 68 VEFSEFVALVAPE 80
V + EF ++A E
Sbjct: 59 VNYEEFARMLAQE 71
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 74/151 (49%), Gaps = 3/151 (1%)
Query: 8 NLDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGL 67
L ++Q E+RE F FD + +P ++++ +I D + +G
Sbjct: 1 GLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGT 60
Query: 68 VEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAE 127
++F EF+ ++ ++ S E++ + FR+FD D G I+ L +LG +T E
Sbjct: 61 IDFEEFLQMMTAKMGERDSR---EEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDE 117
Query: 128 ELTGMIREADTDGDGRISFQEFAQAITSAAF 158
EL MI EAD DGDG ++ +EF + + +
Sbjct: 118 ELQEMIDEADRDGDGEVNEEEFFRIMKKTSL 148
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 3/156 (1%)
Query: 3 NKQPMNLDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADT 62
K + L ++Q E+RE F FD + +P ++++ +I + D
Sbjct: 16 KKGRVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDK 75
Query: 63 NSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGH 122
+ +G ++F EF+ ++ ++ S E++ + FR+FD D +G IT +L +LG
Sbjct: 76 DGSGTIDFEEFLTMMTAKM---GERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGE 132
Query: 123 ELTAEELTGMIREADTDGDGRISFQEFAQAITSAAF 158
LT EEL MI EAD + D I EF + + +
Sbjct: 133 NLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKTSL 168
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 70/139 (50%), Gaps = 3/139 (2%)
Query: 11 DDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEF 70
++Q E+RE F FD + +P ++++ +I + D G + F
Sbjct: 2 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNF 61
Query: 71 SEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELT 130
+F+ V + +S K ++E++ + F++FD D G I+ L +LG LT EEL
Sbjct: 62 GDFLT-VMTQKMSEKD--TKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQ 118
Query: 131 GMIREADTDGDGRISFQEF 149
MI EAD DGDG +S QEF
Sbjct: 119 EMIDEADRDGDGEVSEQEF 137
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%)
Query: 91 EQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFA 150
+++R+ F +FD DG G I EL +M LG E EE+ MI E D +G G+++F +F
Sbjct: 6 QEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFL 65
Query: 151 QAIT 154
+T
Sbjct: 66 TVMT 69
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 65.9 bits (159), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 5/78 (6%)
Query: 78 APELLSSKSPY-----SEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGM 132
P LLS + P E++R+ F++FDRDGNGFI+ EL +M LG+ EL +
Sbjct: 18 VPNLLSEQRPVDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVI 77
Query: 133 IREADTDGDGRISFQEFA 150
I+ D DGDG++ F+EF
Sbjct: 78 IQRLDMDGDGQVDFEEFV 95
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%)
Query: 1 MSNKQPMNLDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKA 60
+S ++P+++ +D++ E+RE F+ FDR+ + P+ +LE +IQ+
Sbjct: 22 LSEQRPVDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRL 81
Query: 61 DTNSNGLVEFSEFVALVAP 79
D + +G V+F EFV L+ P
Sbjct: 82 DMDGDGQVDFEEFVTLLGP 100
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 53 LETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQ-LRQLFRMFDRDGNGFITAA 111
+ LI + D NG ++F F + A L +P +Q LR+ FR++D++GNG+I+
Sbjct: 52 IRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTD 111
Query: 112 ELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAITSA 156
+ +A+L L++E+L MI E D DG G + F+EF +T
Sbjct: 112 VMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMTGG 156
Score = 31.2 bits (69), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 29/63 (46%)
Query: 16 ELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSEFVA 75
ELRE FR +D+ + S + L+ +I + D + +G V+F EF+
Sbjct: 92 ELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMG 151
Query: 76 LVA 78
++
Sbjct: 152 VMT 154
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 5/153 (3%)
Query: 6 PMN--LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTN 63
P+N L ++Q E+ E F FD NND + ++ LI + D+
Sbjct: 12 PLNSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSE 71
Query: 64 SNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHE 123
L+++ +F ++ ++L + P E +++ F++FD D G I+ L +LG
Sbjct: 72 GRHLMKYDDFYIVMGEKILK-RDPLDE--IKRAFQLFDDDHTGKISIKNLRRVAKELGET 128
Query: 124 LTAEELTGMIREADTDGDGRISFQEFAQAITSA 156
LT EEL MI E D DGDG I+ EF T +
Sbjct: 129 LTDEELRAMIEEFDLDGDGEINENEFIAICTDS 161
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 18/156 (11%)
Query: 12 DQIAELREIFRSFDRNNDXX--------------XXXXXXXXXXXXXXXKPSPDQLETLI 57
D+ +L EIFR D NND DQ+++L+
Sbjct: 328 DETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLM 387
Query: 58 QKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSM 117
D + +G +E+SEF+A + S E++ + F+MFD+DG+G I+ EL
Sbjct: 388 PLLDMDGSGSIEYSEFIASAIDRTI----LLSRERMERAFKMFDKDGSGKISTKELFKLF 443
Query: 118 AKLGHELTAEELTGMIREADTDGDGRISFQEFAQAI 153
++ + EEL +I + D + DG + F EF + +
Sbjct: 444 SQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEML 479
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 14/118 (11%)
Query: 52 QLETLIQKADTNSNGLVE-------FSEFVALVAPE---LLSSKSPYSEEQLRQLFRMFD 101
QL + +K DTN++G+++ + EF+ L + L+ ++ E+Q+ L + D
Sbjct: 332 QLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLD 391
Query: 102 RDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRIS----FQEFAQAITS 155
DG+G I +E S L+ E + + D DG G+IS F+ F+QA +S
Sbjct: 392 MDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQADSS 449
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 14/157 (8%)
Query: 12 DQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSP--------DQLETLIQKADTN 63
++ EL +IFR D+N D + +++ ++ AD +
Sbjct: 60 EETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFD 119
Query: 64 SNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHE 123
NG +++SEFV + + KS S+++L F+ FD+DGNG I+ ELA S+ L H
Sbjct: 120 RNGYIDYSEFVTVA----MDRKSLLSKDKLESAFQKFDQDGNGKISVDELA-SVFGLDH- 173
Query: 124 LTAEELTGMIREADTDGDGRISFQEFAQAITSAAFDN 160
L ++ MI D++ DG + F+EF + I +N
Sbjct: 174 LESKTWKEMISGIDSNNDGDVDFEEFCKMIQKLCSNN 210
Score = 33.9 bits (76), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 71 SEFVALVAPELLSSKSPYSEE--QLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTA-- 126
S+ +A A ++SK EE +L +FR D++G+G + EL +KL E A
Sbjct: 41 SQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVF 100
Query: 127 ------EELTGMIREADTDGDGRISFQEFA 150
E+ ++ AD D +G I + EF
Sbjct: 101 DLPQIESEVDAILGAADFDRNGYIDYSEFV 130
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 14/157 (8%)
Query: 12 DQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSP--------DQLETLIQKADTN 63
++ EL +IFR D+N D + +++ ++ AD +
Sbjct: 343 EETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFD 402
Query: 64 SNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHE 123
NG +++SEFV + + KS S+++L F+ FD+DGNG I+ ELA S+ L H
Sbjct: 403 RNGYIDYSEFVTVA----MDRKSLLSKDKLESAFQKFDQDGNGKISVDELA-SVFGLDH- 456
Query: 124 LTAEELTGMIREADTDGDGRISFQEFAQAITSAAFDN 160
L ++ MI D++ DG + F+EF + I +N
Sbjct: 457 LESKTWKEMISGIDSNNDGDVDFEEFCKMIQKLCSNN 493
Score = 33.1 bits (74), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 71 SEFVALVAPELLSSKSPYSEE--QLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTA-- 126
S+ +A A ++SK EE +L +FR D++G+G + EL +KL E A
Sbjct: 324 SQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVF 383
Query: 127 ------EELTGMIREADTDGDGRISFQEFA 150
E+ ++ AD D +G I + EF
Sbjct: 384 DLPQIESEVDAILGAADFDRNGYIDYSEFV 413
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 12/110 (10%)
Query: 50 PDQLETLIQKADTNSNGLVEFSEFVAL-VAPELLSSKSPYSEEQLRQLFRMFDRDGNGFI 108
P + L+ + D++ +G ++++EF+A + LS K Y FR+FD D +G I
Sbjct: 89 PPNFDLLLDQIDSDGSGNIDYTEFLAAAIDRRQLSKKLIYCA------FRVFDVDNDGEI 142
Query: 109 TAAELAHSM---AKLGH--ELTAEELTGMIREADTDGDGRISFQEFAQAI 153
T AELAH + K G+ E ++ MIRE D +GDG+I F EF++ +
Sbjct: 143 TTAELAHVLFNGNKRGNITERDVNQVKKMIREVDKNGDGKIDFYEFSEMM 192
Score = 31.2 bits (69), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 73 FVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGM 132
F L + + Y ++L+ F D +G G IT +L + + G L +
Sbjct: 37 FQKLAMTIIAQQSNDYDVQKLKAAFLHLDEEGKGNITKLQLRKGLERSGLMLPPN-FDLL 95
Query: 133 IREADTDGDGRISFQEFAQA 152
+ + D+DG G I + EF A
Sbjct: 96 LDQIDSDGSGNIDYTEFLAA 115
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Query: 11 DDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEF 70
DDQ++E +E F FD + P + +AD NG ++F
Sbjct: 2 DDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQF 61
Query: 71 SEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELT 130
EF++++ + K SE+ LRQ FR FD +G G+I A L ++ LG L E
Sbjct: 62 PEFLSMMGRRM---KQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFA 118
Query: 131 GMIREADTDGDGRISFQEFAQAI 153
+ +T+ G+I + F +
Sbjct: 119 EFLGITETE-KGQIRYDNFINTM 140
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 61/106 (57%), Gaps = 8/106 (7%)
Query: 53 LETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAE 112
++ +I DT+ NG V+F EF+ V+ S K E++LR FR++D D +G+I+ E
Sbjct: 40 VQRVIDIFDTDGNGEVDFKEFIEGVSQ--FSVKGD-KEQKLRFAFRIYDMDKDGYISNGE 96
Query: 113 LAHSMAKL-GHELTAEELTGMIRE----ADTDGDGRISFQEFAQAI 153
L + + G+ L +L ++ + AD DGDGRISF+EF +
Sbjct: 97 LFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVV 142
Score = 27.7 bits (60), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 91 EQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFA 150
++L + F+ D D +G ++ E S+ +L + + + DTDG+G + F+EF
Sbjct: 6 KRLGKRFKKLDLDNSGSLSVEEFM-SLPELQQNPLVQRVIDIF---DTDGNGEVDFKEFI 61
Query: 151 QAIT 154
+ ++
Sbjct: 62 EGVS 65
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 61/106 (57%), Gaps = 8/106 (7%)
Query: 53 LETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAE 112
++ +I DT+ NG V+F EF+ V+ S K E++LR FR++D D +G+I+ E
Sbjct: 41 VQRVIDIFDTDGNGEVDFKEFIEGVSQ--FSVKGD-KEQKLRFAFRIYDMDKDGYISNGE 97
Query: 113 LAHSMAKL-GHELTAEELTGMIRE----ADTDGDGRISFQEFAQAI 153
L + + G+ L +L ++ + AD DGDGRISF+EF +
Sbjct: 98 LFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVV 143
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 91 EQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFA 150
++L + F+ D D +G ++ E S+ +L + + + DTDG+G + F+EF
Sbjct: 7 KRLGKRFKKLDLDNSGSLSVEEFM-SLPELQQNPLVQRVIDIF---DTDGNGEVDFKEFI 62
Query: 151 QAIT 154
+ ++
Sbjct: 63 EGVS 66
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 61/106 (57%), Gaps = 8/106 (7%)
Query: 53 LETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAE 112
++ +I DT+ NG V+F EF+ V+ S K E++LR FR++D D +G+I+ E
Sbjct: 54 VQRVIDIFDTDGNGEVDFKEFIEGVSQ--FSVKGD-KEQKLRFAFRIYDMDKDGYISNGE 110
Query: 113 LAHSMAKL-GHELTAEELTGMIRE----ADTDGDGRISFQEFAQAI 153
L + + G+ L +L ++ + AD DGDGRISF+EF +
Sbjct: 111 LFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVV 156
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 82 LSSKSPYSEEQLRQL---FRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADT 138
L S + +++++L F+ D D +G ++ E S+ +L + + + DT
Sbjct: 8 LEMCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFM-SLPELQQNPLVQRVIDIF---DT 63
Query: 139 DGDGRISFQEFAQAIT 154
DG+G + F+EF + ++
Sbjct: 64 DGNGEVDFKEFIEGVS 79
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 61/106 (57%), Gaps = 8/106 (7%)
Query: 53 LETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAE 112
++ +I DT+ NG V+F EF+ V+ S K E++LR FR++D D +G+I+ E
Sbjct: 55 VQRVIDIFDTDGNGEVDFKEFIEGVSQ--FSVKGD-KEQKLRFAFRIYDMDKDGYISNGE 111
Query: 113 LAHSMAKL-GHELTAEELTGMIRE----ADTDGDGRISFQEFAQAI 153
L + + G+ L +L ++ + AD DGDGRISF+EF +
Sbjct: 112 LFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVV 157
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 82 LSSKSPYSEEQLRQL---FRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADT 138
L S + +++++L F+ D D +G ++ E S+ +L + + + DT
Sbjct: 9 LEMCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFM-SLPELQQNPLVQRVIDIF---DT 64
Query: 139 DGDGRISFQEFAQAIT 154
DG+G + F+EF + ++
Sbjct: 65 DGNGEVDFKEFIEGVS 80
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 66/114 (57%), Gaps = 12/114 (10%)
Query: 48 PSPDQ-LETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNG 106
PS ++ +E + + D N +G ++F E+VA ++ +L K +++LR F+++D DGNG
Sbjct: 48 PSANKYVEQMFETFDFNKDGYIDFMEYVAALSL-VLKGK---VDQKLRWYFKLYDVDGNG 103
Query: 107 FITAAELAH------SMAKLGHELTAEELTGMI-READTDGDGRISFQEFAQAI 153
I EL + ++ + +TAEE T M+ + D +GDG +S +EF + +
Sbjct: 104 CIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGV 157
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 6/142 (4%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L +++I L+E+F+ D +N + +++ L+ AD + +G +
Sbjct: 4 LSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTI 63
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
++ EF+A + EE L F FD+DG+G+IT E+ + G L
Sbjct: 64 DYGEFIAAT----VHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFG--LDDIH 117
Query: 129 LTGMIREADTDGDGRISFQEFA 150
+ MI+E D D DG+I + EFA
Sbjct: 118 IDDMIKEIDQDNDGQIDYGEFA 139
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 89 SEEQ---LRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRIS 145
SEE+ L++LF+M D D +G IT EL + ++G EL E+ ++ AD D G I
Sbjct: 5 SEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTID 64
Query: 146 FQEFAQA 152
+ EF A
Sbjct: 65 YGEFIAA 71
Score = 33.1 bits (74), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 44/111 (39%), Gaps = 10/111 (9%)
Query: 53 LETLIQKADTNSNGLVEFSEF---VALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFIT 109
L+ L + DT+++G + F E + V EL+ S +++ L D D +G I
Sbjct: 12 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMES-------EIKDLMDAADIDKSGTID 64
Query: 110 AAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAITSAAFDN 160
E + L E L D DG G I+ E QA D+
Sbjct: 65 YGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDD 115
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 71/153 (46%), Gaps = 5/153 (3%)
Query: 6 PMN--LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTN 63
P+N L ++Q E+ E F FD NND + ++ LI + D+
Sbjct: 12 PLNSELLEEQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSE 71
Query: 64 SNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHE 123
L ++ +F +V E + + P E +++ F++FD D G I+ L +LG
Sbjct: 72 GRHLXKYDDFY-IVXGEKILKRDPLDE--IKRAFQLFDDDHTGKISIKNLRRVAKELGET 128
Query: 124 LTAEELTGMIREADTDGDGRISFQEFAQAITSA 156
LT EEL I E D DGDG I+ EF T +
Sbjct: 129 LTDEELRAXIEEFDLDGDGEINENEFIAICTDS 161
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 44/67 (65%)
Query: 90 EEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEF 149
+++LR+ FR++D++GNG+I+ + +A+L L++E+L MI E D DG G + F+EF
Sbjct: 2 QQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEF 61
Query: 150 AQAITSA 156
+T
Sbjct: 62 MGVMTGG 68
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 29/63 (46%)
Query: 16 ELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSEFVA 75
ELRE FR +D+ + S + L+ +I + D + +G V+F EF+
Sbjct: 4 ELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMG 63
Query: 76 LVA 78
++
Sbjct: 64 VMT 66
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 58.9 bits (141), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 14/142 (9%)
Query: 16 ELREIFRSFDRNNDXXXXXXXXXX--------XXXXXXXKPSPDQLETLIQKADTNSNGL 67
EL +IF+ D+N D K ++++ ++++ D + NG
Sbjct: 356 ELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGY 415
Query: 68 VEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAE 127
+E+SEF+++ + + +SEE+LR+ F +FD D +G IT ELA+ ++ +
Sbjct: 416 IEYSEFISVC----MDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGLT--SISEK 469
Query: 128 ELTGMIREADTDGDGRISFQEF 149
++ EAD + D I F EF
Sbjct: 470 TWNDVLGEADQNKDNMIDFDEF 491
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 89 SEEQL---RQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRIS 145
+EEQ+ ++ F +FD+DG+G IT EL M LG T EL MI E D DGDG I
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTID 64
Query: 146 FQEF 149
F EF
Sbjct: 65 FPEF 68
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 38/73 (52%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + +G +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 63
Query: 69 EFSEFVALVAPEL 81
+F EF+ ++A ++
Sbjct: 64 DFPEFLTMMARKM 76
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 17/153 (11%)
Query: 12 DQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPD-----------QLETLIQKA 60
D+ EL IF D+N D D +++ ++
Sbjct: 332 DETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAV 391
Query: 61 DTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKL 120
D + NG +E+SEFV + + K+ S E+L + FRMFD D +G I++ ELA
Sbjct: 392 DFDKNGYIEYSEFVTVA----MDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGV- 446
Query: 121 GHELTAEELTGMIREADTDGDGRISFQEFAQAI 153
++ +E ++ E D + DG + F EF Q +
Sbjct: 447 -SDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 478
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 17/153 (11%)
Query: 12 DQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPD-----------QLETLIQKA 60
D+ EL IF D+N D D +++ ++
Sbjct: 356 DETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAV 415
Query: 61 DTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKL 120
D + NG +E+SEFV + + K+ S E+L + FRMFD D +G I++ ELA
Sbjct: 416 DFDKNGYIEYSEFVTVA----MDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGV- 470
Query: 121 GHELTAEELTGMIREADTDGDGRISFQEFAQAI 153
++ +E ++ E D + DG + F EF Q +
Sbjct: 471 -SDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 502
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 17/153 (11%)
Query: 12 DQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPD-----------QLETLIQKA 60
D+ EL IF D+N D D +++ ++
Sbjct: 355 DETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAV 414
Query: 61 DTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKL 120
D + NG +E+SEFV + + K+ S E+L + FRMFD D +G I++ ELA
Sbjct: 415 DFDKNGYIEYSEFVTVA----MDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGV- 469
Query: 121 GHELTAEELTGMIREADTDGDGRISFQEFAQAI 153
++ +E ++ E D + DG + F EF Q +
Sbjct: 470 -SDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 501
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 8/144 (5%)
Query: 8 NLDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGL 67
+L +++IA L+E F D + ++ L Q AD +++G
Sbjct: 20 SLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADVDNSGT 79
Query: 68 VEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHE-LTA 126
+++ EF+A L E+ L F FD+DG+G+IT EL + + G E +
Sbjct: 80 IDYKEFIAAT----LHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFGVEDVRI 135
Query: 127 EELTGMIREADTDGDGRISFQEFA 150
EEL R+ D D DGRI + EF
Sbjct: 136 EELX---RDVDQDNDGRIDYNEFV 156
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 93 LRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQA 152
L++ F D D +G IT EL + ++G L E+ + + AD D G I ++EF A
Sbjct: 29 LKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADVDNSGTIDYKEFIAA 88
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 64/149 (42%), Gaps = 7/149 (4%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
D QI E +E F D+N D P+ + LE ++ +A G +
Sbjct: 1 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSEAP----GPI 56
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
F+ F+ + E L+ P E+ +R F FD + +GFI L + +G T EE
Sbjct: 57 NFTMFLTMFG-EKLNGTDP--EDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEE 113
Query: 129 LTGMIREADTDGDGRISFQEFAQAITSAA 157
+ M REA D G ++ EF + + A
Sbjct: 114 VDEMYREAPIDKKGNFNYVEFTRILKHGA 142
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 89 SEEQL---RQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRIS 145
SEEQ+ ++ F +FD+DG+G IT ELA + L T EEL MI E D DG+G I
Sbjct: 5 SEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIE 64
Query: 146 FQEF 149
F EF
Sbjct: 65 FDEF 68
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 39/73 (53%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QI + +E F FD++ D P+ ++L+ +I + D + NG +
Sbjct: 4 LSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTI 63
Query: 69 EFSEFVALVAPEL 81
EF EF++L+A ++
Sbjct: 64 EFDEFLSLMAKKV 76
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 89 SEEQL---RQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRIS 145
SEEQ+ ++ F +FD+DG+G IT ELA + L T EEL MI E D DG+G I
Sbjct: 5 SEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIE 64
Query: 146 FQEF 149
F EF
Sbjct: 65 FDEF 68
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 39/73 (53%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QI + +E F FD++ D P+ ++L+ +I + D + NG +
Sbjct: 4 LSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTI 63
Query: 69 EFSEFVALVAPEL 81
EF EF++L+A ++
Sbjct: 64 EFDEFLSLMAKKV 76
Score = 26.6 bits (57), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 61 DTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAK 119
D + +G + E ++ ++P +EE+L+ + D DGNG I E MAK
Sbjct: 20 DKDGDGCITVEELATVIRS---LDQNP-TEEELQDMISEVDADGNGTIEFDEFLSLMAK 74
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 12/110 (10%)
Query: 50 PDQLETLIQKADTNSNGLVEFSEFVAL-VAPELLSSKSPYSEEQLRQLFRMFDRDGNGFI 108
P + L+ + D++ +G ++++EF+A + + LS K Y FR+FD D +G I
Sbjct: 86 PYNFDLLLDQIDSDGSGKIDYTEFIAAALDRKQLSKKLIYCA------FRVFDVDNDGEI 139
Query: 109 TAAELAHSMA---KLGH--ELTAEELTGMIREADTDGDGRISFQEFAQAI 153
T AELAH + K G+ + + MIR+ D + DG+I F EF++ +
Sbjct: 140 TTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMM 189
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 72 EFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTG 131
+F L + + Y E+L+ F + D DG G+IT +L + K G +L
Sbjct: 33 KFQKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPY-NFDL 91
Query: 132 MIREADTDGDGRISFQEFAQA 152
++ + D+DG G+I + EF A
Sbjct: 92 LLDQIDSDGSGKIDYTEFIAA 112
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 41/66 (62%)
Query: 90 EEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEF 149
++++R+ F +FD DG+G I A EL +M LG E EE+ MI E D DG G I F+EF
Sbjct: 29 KQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEF 88
Query: 150 AQAITS 155
+T+
Sbjct: 89 LTMMTA 94
Score = 34.3 bits (77), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 37/79 (46%)
Query: 3 NKQPMNLDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADT 62
K + L ++Q E+RE F FD + +P ++++ +I + D
Sbjct: 18 KKGRVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDK 77
Query: 63 NSNGLVEFSEFVALVAPEL 81
+ +G ++F EF+ ++ ++
Sbjct: 78 DGSGTIDFEEFLTMMTAKM 96
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 87 PYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISF 146
P + + ++F+ FD +G+G I+AAEL ++ LG +T +E+ M+ E DTDGDG ISF
Sbjct: 5 PQDKAERERIFKRFDANGDGKISAAELGEALKTLG-SITPDEVKHMMAEIDTDGDGFISF 63
Query: 147 QEF 149
QEF
Sbjct: 64 QEF 66
Score = 30.0 bits (66), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 15 AELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSEFV 74
AE IF+ FD N D +PD+++ ++ + DT+ +G + F EF
Sbjct: 9 AERERIFKRFDANGDGKISAAELGEALKTLGS-ITPDEVKHMMAEIDTDGDGFISFQEFT 67
Score = 26.6 bits (57), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Query: 54 ETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAEL 113
E + ++ D N +G + +E E L + + ++++ + D DG+GFI+ E
Sbjct: 12 ERIFKRFDANGDGKISAAEL-----GEALKTLGSITPDEVKHMMAEIDTDGDGFISFQEF 66
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 8/145 (5%)
Query: 8 NLDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGL 67
+L D +I LR IF + D +N + P + +++ D+N++G
Sbjct: 50 HLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQ 109
Query: 68 VEFSEFVALVAPELLSSKSPYSEEQLRQL-FRMFDRDGNGFITAAELAHSMAK--LGHEL 124
+ +++F+A K Y ++++ + F+ FD DGNG I+ EL + + + L
Sbjct: 110 IHYTDFLAATI-----DKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPL 164
Query: 125 TAEELTGMIREADTDGDGRISFQEF 149
+ + +++E D +GDG I F EF
Sbjct: 165 IDKAIDSLLQEVDLNGDGEIDFHEF 189
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 35/60 (58%)
Query: 93 LRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQA 152
LR +F D D +G +++ E+ + K+G++ ++ ++R+ D++ G+I + +F A
Sbjct: 59 LRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAA 118
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 89 SEEQL---RQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRIS 145
+EEQ+ ++ F +FD+DG+G IT EL M LG T EL MI E D DG+G I
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 146 FQEF 149
F EF
Sbjct: 65 FPEF 68
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 38/73 (52%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 69 EFSEFVALVAPEL 81
+F EF+ ++A ++
Sbjct: 64 DFPEFLTMMARKM 76
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 34/58 (58%)
Query: 92 QLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEF 149
+ ++ F +FD+DG+G IT EL M LG T EL MI E D DG+G I F EF
Sbjct: 11 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L D+QI+E +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 4 LTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 69 EFSEFVALVAPEL 81
+F EF+ L+A ++
Sbjct: 64 DFPEFLNLMARKM 76
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 89 SEEQL---RQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRIS 145
+EEQ+ ++ F +FD+DG+G IT EL M LG T EL MI E D DG+G I
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 146 FQEF 149
F EF
Sbjct: 65 FPEF 68
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 38/73 (52%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 69 EFSEFVALVAPEL 81
+F EF+ ++A ++
Sbjct: 64 DFPEFLTMMARKM 76
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 89 SEEQL---RQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRIS 145
+EEQ+ ++ F +FD+DG+G IT EL M LG T EL MI E D DG+G I
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 146 FQEF 149
F EF
Sbjct: 65 FPEF 68
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 69 EFSEFVALVA 78
+F EF+ ++A
Sbjct: 64 DFPEFLTMMA 73
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 89 SEEQL---RQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRIS 145
+EEQ+ ++ F +FD+DG+G IT EL M LG T EL MI E D DG+G I
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 146 FQEF 149
F EF
Sbjct: 66 FPEF 69
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 69 EFSEFVALVA 78
+F EF+ ++A
Sbjct: 65 DFPEFLTMMA 74
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 89 SEEQL---RQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRIS 145
+EEQ+ ++ F +FD+DG+G IT EL M LG T EL MI E D DG+G I
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 146 FQEF 149
F EF
Sbjct: 65 FPEF 68
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 38/73 (52%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 69 EFSEFVALVAPEL 81
+F EF+ ++A ++
Sbjct: 64 DFPEFLTMMARKM 76
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 7 MNLDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQ--KADTNS 64
+ + DQ+ E +E F FDR D P+ ++ ++ K+D
Sbjct: 2 IEFNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELK 61
Query: 65 NGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHEL 124
+ V+F F+ ++ + ++ + E + FR+FD++GNG + AEL H + LG ++
Sbjct: 62 SRRVDFETFLPMLQA-VAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKM 120
Query: 125 TAEELTGMIREADTDGDGRISFQEFAQAITSA 156
T EE+ ++ D +G I+++ F + I S
Sbjct: 121 TEEEVETVL-AGHEDSNGCINYEAFLKHILSV 151
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 89 SEEQL---RQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRIS 145
+EEQ+ ++ F +FD+DG+G IT EL M LG T EL MI E D DG+G I
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 146 FQEF 149
F EF
Sbjct: 65 FPEF 68
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 38/73 (52%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 69 EFSEFVALVAPEL 81
+F EF+ ++A ++
Sbjct: 64 DFPEFLTMMARKM 76
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 89 SEEQL---RQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRIS 145
+EEQ+ ++ F +FD+DG+G IT EL M LG T EL MI E D DG+G I
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 146 FQEF 149
F EF
Sbjct: 65 FPEF 68
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 38/73 (52%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 69 EFSEFVALVAPEL 81
+F EF+ ++A ++
Sbjct: 64 DFPEFLTMMARKM 76
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 89 SEEQL---RQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRIS 145
+EEQ+ ++ F +FD+DG+G IT EL M LG T EL MI E D DG+G I
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 146 FQEF 149
F EF
Sbjct: 65 FPEF 68
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F FD++ D P+ +L+ +I + D + NG +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFR 98
+F EF+ ++A ++ K SEE++R+ FR
Sbjct: 64 DFPEFLTMMARKM---KDTDSEEEIREAFR 90
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 72/148 (48%), Gaps = 4/148 (2%)
Query: 11 DDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQ--KADTNSNGLV 68
++Q AE +E F+ FDR D P+ ++ ++ K+D + +
Sbjct: 5 EEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTL 64
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F +F+ ++ + +K E + R+FD++GNG + AE+ H + LG ++T EE
Sbjct: 65 KFEQFLPMMQT-IAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEE 123
Query: 129 LTGMIREADTDGDGRISFQEFAQAITSA 156
+ ++ D +G I+++E + + S
Sbjct: 124 VEQLVA-GHEDSNGCINYEELVRMVLSG 150
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 72/148 (48%), Gaps = 4/148 (2%)
Query: 11 DDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQ--KADTNSNGLV 68
++Q AE +E F+ FDR D P+ ++ ++ K+D + +
Sbjct: 3 EEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTL 62
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
+F +F+ ++ + +K E + R+FD++GNG + AE+ H + LG ++T EE
Sbjct: 63 KFEQFLPMMQT-IAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEE 121
Query: 129 LTGMIREADTDGDGRISFQEFAQAITSA 156
+ ++ D +G I+++E + + S
Sbjct: 122 VEQLVA-GHEDSNGCINYEELVRMVLSG 148
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 91 EQLRQLFRMFDRDGNGFITAAELAHSMAKL-GHELTAEELTGMIREADTDGDGRISFQEF 149
++LR FR FD +G+G I+ +EL +M KL GH++ ++ +IR+ D +GDGR+ F+EF
Sbjct: 7 KELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEF 66
Query: 150 AQAIT 154
+ ++
Sbjct: 67 VRMMS 71
Score = 33.5 bits (75), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 14 IAELREIFRSFDRNNDXXXXXXXXXXXXXXX-XXKPSPDQLETLIQKADTNSNGLVEFSE 72
+ ELR+ FR FD N D + +E +I+ D N +G V+F E
Sbjct: 6 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 65
Query: 73 FVALVA 78
FV +++
Sbjct: 66 FVRMMS 71
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 70 FSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEEL 129
F +F+ V + +S K ++E++ + F++FD D G I+ L +LG LT EEL
Sbjct: 3 FGDFLT-VMTQKMSEKD--TKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEEL 59
Query: 130 TGMIREADTDGDGRISFQEFAQAITSAAF 158
MI EAD DGDG +S QEF + + +
Sbjct: 60 QEMIDEADRDGDGEVSEQEFLRIMKKTSL 88
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 5/141 (3%)
Query: 16 ELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSEFVA 75
+++E F+ FD++ND P+ +L T+ + + L F
Sbjct: 6 QIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKEFDLATFKT--- 62
Query: 76 LVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIRE 135
V + + + + S+E L FR D++GNG I AEL + LG LT+ E+ +++E
Sbjct: 63 -VYRKPIKTPTEQSKEML-DAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKE 120
Query: 136 ADTDGDGRISFQEFAQAITSA 156
GDG I+++ F + +
Sbjct: 121 VSVSGDGAINYESFVDMLVTG 141
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 82 LSSKSPYSEEQ---LRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADT 138
+S K +EEQ +R+ F +FD DG G I EL +M LG E EE+ MI E D
Sbjct: 19 MSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDK 78
Query: 139 DGDGRISFQEFAQAIT 154
+G G+++F +F +T
Sbjct: 79 EGTGKMNFGDFLTVMT 94
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 89 SEEQL---RQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRIS 145
+EEQ+ ++ F ++D+DG+G IT EL M LG T EL MI E D DG+G I
Sbjct: 5 TEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTID 64
Query: 146 FQEF 149
F EF
Sbjct: 65 FPEF 68
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++QIAE +E F +D++ D P+ +L+ +I + D + NG +
Sbjct: 4 LTEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTI 63
Query: 69 EFSEFVALVA 78
+F EF+ ++A
Sbjct: 64 DFPEFLTMMA 73
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 17/153 (11%)
Query: 12 DQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPD-----------QLETLIQKA 60
D+ EL IF D+N D D +++ ++
Sbjct: 332 DETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQVLDAV 391
Query: 61 DTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKL 120
D + NG +E+SEFV + K+ S E+L + FR FD D +G I++ ELA
Sbjct: 392 DFDKNGYIEYSEFVTVAX----DRKTLLSRERLERAFRXFDSDNSGKISSTELATIFGV- 446
Query: 121 GHELTAEELTGMIREADTDGDGRISFQEFAQAI 153
++ +E ++ E D + DG + F EF Q +
Sbjct: 447 -SDVDSETWKSVLSEVDKNNDGEVDFDEFQQXL 478
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%)
Query: 89 SEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQE 148
++E++ + F++FD D G I+ L +LG LT EEL MI EAD DGDG +S QE
Sbjct: 9 TKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQE 68
Query: 149 FAQAITSAAF 158
F + + +
Sbjct: 69 FLRIMKKTSL 78
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%)
Query: 90 EEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEF 149
E +L++ FR+ D++ G I L + LG ELT +E+ MI E DTDG G + ++EF
Sbjct: 6 ERELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEF 65
Query: 150 AQAITSA 156
+ S+
Sbjct: 66 KCLMMSS 72
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 29/62 (46%)
Query: 16 ELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSEFVA 75
EL+E FR D+ + + D++E +I + DT+ +G V++ EF
Sbjct: 8 ELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEFKC 67
Query: 76 LV 77
L+
Sbjct: 68 LM 69
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 52 QLETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAA 111
+++ ++Q D + NG +E+SEFV + + L S E+L F+ FD DG+G IT
Sbjct: 88 EVDHILQSVDFDRNGYIEYSEFVTVCMDKQL----LLSRERLLAAFQQFDSDGSGKITNE 143
Query: 112 ELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAI 153
EL E+ E +++E D + DG + F+EF + +
Sbjct: 144 ELGRLFGVT--EVDDETWHQVLQECDKNNDGEVDFEEFVEMM 183
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 13/93 (13%)
Query: 71 SEFVALVAPELLSSKSPYSEE--QLRQLFRMFDRDGNGFITAAELAHSMAKL----GHEL 124
S+ +A A + SK EE +L Q+FR D +G+G + EL KL G +
Sbjct: 18 SQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTV 77
Query: 125 T-------AEELTGMIREADTDGDGRISFQEFA 150
+ E+ +++ D D +G I + EF
Sbjct: 78 SDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFV 110
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 40/63 (63%)
Query: 89 SEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQE 148
SEE+L LFRMFD++ +G+I EL + G +T +++ ++++ D + DGRI + E
Sbjct: 3 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 62
Query: 149 FAQ 151
F +
Sbjct: 63 FLE 65
Score = 33.9 bits (76), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 16 ELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSEFVA 75
EL ++FR FD+N D + D +E L++ D N++G +++ EF+
Sbjct: 6 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 65
Query: 76 LV 77
+
Sbjct: 66 FM 67
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 52 QLETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAA 111
+++ ++Q D + NG +E+SEFV + + L S E+L F+ FD DG+G IT
Sbjct: 362 EVDHILQSVDFDRNGYIEYSEFVTVCMDKQL----LLSRERLLAAFQQFDSDGSGKITNE 417
Query: 112 ELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAI 153
EL E+ E +++E D + DG + F+EF + +
Sbjct: 418 ELGRLFGVT--EVDDETWHQVLQECDKNNDGEVDFEEFVEMM 457
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 13/93 (13%)
Query: 71 SEFVALVAPELLSSKSPYSEE--QLRQLFRMFDRDGNGFITAAELAHSMAKL----GHEL 124
S+ +A A + SK EE +L Q+FR D +G+G + EL KL G +
Sbjct: 292 SQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTV 351
Query: 125 T-------AEELTGMIREADTDGDGRISFQEFA 150
+ E+ +++ D D +G I + EF
Sbjct: 352 SDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFV 384
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 89 SEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQE 148
SEE+L LFRMFD++ +G+I EL + G +T +++ ++++ D + DGRI + E
Sbjct: 5 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 64
Query: 149 FAQAITSA 156
F + +
Sbjct: 65 FLEFMKGV 72
Score = 34.3 bits (77), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 16 ELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSEFVA 75
EL ++FR FD+N D + D +E L++ D N++G +++ EF+
Sbjct: 8 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 67
Query: 76 LV 77
+
Sbjct: 68 FM 69
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%)
Query: 89 SEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQE 148
SEE+L FR+FD++ +GFI EL + G + E++ +++++D + DGRI F E
Sbjct: 8 SEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDE 67
Query: 149 FAQAITSA 156
F + +
Sbjct: 68 FLKMMEGV 75
Score = 30.8 bits (68), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 29/62 (46%)
Query: 16 ELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSEFVA 75
EL FR FD+N D + +E L++ +D N++G ++F EF+
Sbjct: 11 ELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLK 70
Query: 76 LV 77
++
Sbjct: 71 MM 72
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 89 SEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQE 148
SEE+L LFRMFD++ +G+I EL + G +T +++ ++++ D + DGRI + E
Sbjct: 4 SEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 63
Query: 149 FAQAITSA 156
F + +
Sbjct: 64 FLEFMKGV 71
Score = 34.3 bits (77), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 16 ELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSEFVA 75
EL ++FR FD+N D + D +E L++ D N++G +++ EF+
Sbjct: 7 ELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 66
Query: 76 LV 77
+
Sbjct: 67 FM 68
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 12/103 (11%)
Query: 51 DQLETLIQKA-DTNSNG---LVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNG 106
+QL LI KA D + NG L EF++F A V + LS + L+ L+++ D DG+G
Sbjct: 35 EQLLQLIFKAIDIDGNGEIDLAEFTKFAAAVKEQDLSDEKV----GLKILYKLMDADGDG 90
Query: 107 FITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEF 149
+T E+ K G+E ++ I +AD +GDG I+ +EF
Sbjct: 91 KLTKEEVTTFFKKFGYEKVVDQ----IMKADANGDGYITLEEF 129
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 6/148 (4%)
Query: 12 DQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLI---QKADTNSNGLV 68
D+I + +E F FDR D P+ ++ ++ K + N+ +
Sbjct: 1 DEINDFKEAFLLFDRTGDAKITLSQVGDIVRALGQNPTNAEINKILGNPSKEEMNAKKIT 60
Query: 69 EFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
F EF+ ++ ++K + E + R+FD++GNG + AEL H +A LG ++T EE
Sbjct: 61 -FEEFLPMLQAAA-NNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEE 118
Query: 129 LTGMIREADTDGDGRISFQEFAQAITSA 156
+ +++ D +G I+++ F + I S
Sbjct: 119 VEELMK-GQEDSNGCINYEAFVKHIMSV 145
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%)
Query: 89 SEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQE 148
+EE+L LFRMFD++ +G+I EL + G +T +++ ++++ D + DGRI + E
Sbjct: 8 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 67
Query: 149 FAQ 151
F +
Sbjct: 68 FLE 70
Score = 33.9 bits (76), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 16 ELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSEFVA 75
EL ++FR FD+N D + D +E L++ D N++G +++ EF+
Sbjct: 11 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 70
Query: 76 LV 77
+
Sbjct: 71 FM 72
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%)
Query: 89 SEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQE 148
+EE+L LFRMFD++ +G+I EL + G +T +++ ++++ D + DGRI + E
Sbjct: 13 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 72
Query: 149 FAQ 151
F +
Sbjct: 73 FLE 75
Score = 34.3 bits (77), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 16 ELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSEFVA 75
EL ++FR FD+N D + D +E L++ D N++G +++ EF+
Sbjct: 16 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 75
Query: 76 LV 77
+
Sbjct: 76 FM 77
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 84 SKSPYSEEQLRQL---FRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDG 140
+++ SEE + + F MFD DG G I+ EL M LG T EEL +I E D DG
Sbjct: 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDG 69
Query: 141 DGRISFQEF 149
G I F+EF
Sbjct: 70 SGTIDFEEF 78
Score = 33.9 bits (76), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 15/73 (20%), Positives = 35/73 (47%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++ IAE + F FD + P+ ++L+ +I++ D + +G +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 69 EFSEFVALVAPEL 81
+F EF+ ++ ++
Sbjct: 74 DFEEFLVMMVRQM 86
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 61 DTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKL 120
D G F +F+ V + S K ++E++ + F++FD D G I+ L +L
Sbjct: 77 DKEGTGKXNFGDFLT-VXTQKXSEKD--TKEEILKAFKLFDDDETGKISFKNLKRVAKEL 133
Query: 121 GHELTAEELTGMIREADTDGDGRISFQEF 149
G LT EEL I EAD DGDG +S QEF
Sbjct: 134 GENLTDEELQEXIDEADRDGDGEVSEQEF 162
Score = 35.0 bits (79), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 82 LSSKSPYSEEQ---LRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADT 138
+S K +EEQ +R+ F +FD DG G I EL + LG E EE+ I E D
Sbjct: 19 MSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDK 78
Query: 139 DGDGRISFQEFAQAIT 154
+G G+ +F +F T
Sbjct: 79 EGTGKXNFGDFLTVXT 94
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 7/155 (4%)
Query: 8 NLDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNG- 66
L D+I +L+E+F FD + +P E + T+ G
Sbjct: 3 KLSQDEIDDLKEVFELFDFWDGRDGAVDAFKIGDVCRCLGINPRN-EDVFAVGGTHKMGE 61
Query: 67 -LVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELT 125
+ F EF+ + + Y++ + F+ FDR+G GFI+ AEL H ++ LG L+
Sbjct: 62 KSLPFEEFLPAYEGLMDCEQGTYAD--YMEAFKTFDREGQGFISGAELRHVLSGLGERLS 119
Query: 126 AEELTGMIREADT--DGDGRISFQEFAQAITSAAF 158
EE+ +I D D +G + ++EF + + + +
Sbjct: 120 DEEVDEIINLTDLQEDLEGNVKYEEFVKKVMTGPY 154
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 7/155 (4%)
Query: 8 NLDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNG- 66
L D+I +L+E+F FD + +P E + T+ G
Sbjct: 2 KLSQDEIDDLKEVFELFDFWDGRDGAVDAFKIGDVCRCLGINPRN-EDVFAVGGTHKMGE 60
Query: 67 -LVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELT 125
+ F EF+ + + Y++ + F+ FDR+G GFI+ AEL H ++ LG L+
Sbjct: 61 KSLPFEEFLPAYEGLMDCEQGTYAD--YMEAFKTFDREGQGFISGAELRHVLSGLGERLS 118
Query: 126 AEELTGMIREADT--DGDGRISFQEFAQAITSAAF 158
EE+ +I D D +G + ++EF + + + +
Sbjct: 119 DEEVDEIINLTDLQEDLEGNVKYEEFVKKVMTGPY 153
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 63/114 (55%), Gaps = 16/114 (14%)
Query: 54 ETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAE- 112
E + + D N +G ++F EF+ ++ ++S+ E++L+ F M+D DGNG+I+ AE
Sbjct: 66 EHVFRTFDANGDGTIDFREFIIALS---VTSRGKL-EQKLKWAFSMYDLDGNGYISKAEM 121
Query: 113 ---------LAHSMAKLGH-ELTAEELTGMI-READTDGDGRISFQEFAQAITS 155
+ S+ K+ E T E+ T I R+ DT+ DG++S +EF + S
Sbjct: 122 LEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKS 175
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 32/58 (55%)
Query: 92 QLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEF 149
+ + F MFD DG G I+ EL M LG T EEL +I E D DG G I F+EF
Sbjct: 10 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 67
Score = 33.9 bits (76), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 15/73 (20%), Positives = 35/73 (47%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++ IAE + F FD + P+ ++L+ +I++ D + +G +
Sbjct: 3 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 62
Query: 69 EFSEFVALVAPEL 81
+F EF+ ++ ++
Sbjct: 63 DFEEFLVMMVRQM 75
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 97 FRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADT--DGDGRISFQEFAQAIT 154
F+ FDR+G GFI+ AEL H ++ LG L+ EE+ +I D D +G + ++EF + +
Sbjct: 90 FKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEEFVKKVM 149
Query: 155 SAAF 158
+ +
Sbjct: 150 AGPY 153
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 95 QLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEF 149
++F+ FD +G+G I+++EL ++ LG +T +E+ M+ E DTDGDG ISF EF
Sbjct: 15 RIFKRFDTNGDGKISSSELGDALKTLGS-VTPDEVRRMMAEIDTDGDGFISFDEF 68
Score = 30.4 bits (67), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Query: 14 IAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSEF 73
IA+ IF+ FD N D +PD++ ++ + DT+ +G + F EF
Sbjct: 10 IADRERIFKRFDTNGDGKISSSELGDALKTLGS-VTPDEVRRMMAEIDTDGDGFISFDEF 68
Query: 74 V 74
Sbjct: 69 T 69
Score = 30.0 bits (66), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 54 ETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAEL 113
E + ++ DTN +G + SE A + L S +P +++R++ D DG+GFI+ E
Sbjct: 14 ERIFKRFDTNGDGKISSSELGD--ALKTLGSVTP---DEVRRMMAEIDTDGDGFISFDEF 68
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 82 LSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKL---GHELTAEELTGMIREADT 138
+S S S QL+++FR+ D D +GFI EL + + + LTA E + AD
Sbjct: 32 ISGMSKKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADH 91
Query: 139 DGDGRISFQEFAQAITS 155
DGDG+I +EF + + S
Sbjct: 92 DGDGKIGAEEFQEMVQS 108
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 84 SKSPYSEEQLRQL---FRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDG 140
+++ SEE + + F MFD DG G I+ L M LG T EEL +I E D DG
Sbjct: 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDG 69
Query: 141 DGRISFQEF 149
G I F+EF
Sbjct: 70 SGTIDFEEF 78
Score = 34.3 bits (77), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 15/73 (20%), Positives = 35/73 (47%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++ IAE + F FD + P+ ++L+ +I++ D + +G +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 69 EFSEFVALVAPEL 81
+F EF+ ++ ++
Sbjct: 74 DFEEFLVMMVRQM 86
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 86 SPYSEEQL---RQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDG 142
S +EEQ+ ++ F +FD+D NG I+++ELA M LG + E+ ++ E D DG+
Sbjct: 2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNH 61
Query: 143 RISFQEF 149
+I F EF
Sbjct: 62 QIEFSEF 68
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%)
Query: 8 NLDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGL 67
NL ++QIAE +E F FD++N+ PS ++ L+ + D + N
Sbjct: 3 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ 62
Query: 68 VEFSEFVALVAPEL 81
+EFSEF+AL++ +L
Sbjct: 63 IEFSEFLALMSRQL 76
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 84 SKSPYSEEQLRQL---FRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDG 140
+++ SEE + + F MFD DG G I+ EL M LG T EL +I E D DG
Sbjct: 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDG 69
Query: 141 DGRISFQEF 149
G I F+EF
Sbjct: 70 SGTIDFEEF 78
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/73 (20%), Positives = 33/73 (45%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV 68
L ++ IAE + F FD + P+ +L+ +I + D + +G +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTI 73
Query: 69 EFSEFVALVAPEL 81
+F EF+ ++ ++
Sbjct: 74 DFEEFLVMMVRQM 86
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 69/143 (48%), Gaps = 6/143 (4%)
Query: 16 ELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLI---QKADTNSNGLVEFSE 72
+ +E F FDR D P+ ++ ++ K + N+ + F E
Sbjct: 7 DFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEE 65
Query: 73 FVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGM 132
F+ ++ ++K + E + R+FD++GNG + AEL H +A LG ++T EE+ +
Sbjct: 66 FLPMLQAAA-NNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEEL 124
Query: 133 IREADTDGDGRISFQEFAQAITS 155
++ D +G I+++ F + I S
Sbjct: 125 MK-GQEDSNGCINYEAFVKHIMS 146
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 86 SPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTD--GDGR 143
S + + ++ F +FDR G+ ITA+++ LG T E+ ++ +
Sbjct: 1 SKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAA 60
Query: 144 ISFQEFAQAITSAA 157
I+F+EF + +AA
Sbjct: 61 ITFEEFLPMLQAAA 74
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%)
Query: 89 SEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQE 148
S E++ + FR+FD D +G IT +L +LG LT EEL MI EAD + D I E
Sbjct: 7 SREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDE 66
Query: 149 FAQAITSAAF 158
F + + +
Sbjct: 67 FIRIMKKTSL 76
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 69/143 (48%), Gaps = 6/143 (4%)
Query: 16 ELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLI---QKADTNSNGLVEFSE 72
+ +E F FDR D P+ ++ ++ K + N+ + F E
Sbjct: 9 DFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEE 67
Query: 73 FVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGM 132
F+ ++ ++K + E + R+FD++GNG + AEL H +A LG ++T EE+ +
Sbjct: 68 FLPMLQAAA-NNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEEL 126
Query: 133 IREADTDGDGRISFQEFAQAITS 155
++ D +G I+++ F + I S
Sbjct: 127 MK-GQEDSNGCINYEAFVKHIMS 148
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 86 SPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTD--GDGR 143
S + + ++ F +FDR G+ ITA+++ LG T E+ ++ +
Sbjct: 3 SKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAA 62
Query: 144 ISFQEFAQAITSAA 157
I+F+EF + +AA
Sbjct: 63 ITFEEFLPMLQAAA 76
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 97 FRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADT--DGDGRISFQEFAQAIT 154
F+ FDR+G GFI+ AEL H + LG L+ E++ +I+ D D +G + +++F + +
Sbjct: 90 FKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVM 149
Query: 155 SAAF 158
+ +
Sbjct: 150 AGPY 153
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 97 FRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADT--DGDGRISFQEFAQAIT 154
F+ FDR+G GFI+ AEL H + LG L+ E++ +I+ D D +G + +++F + +
Sbjct: 90 FKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVM 149
Query: 155 SAAF 158
+ +
Sbjct: 150 AGPY 153
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 97 FRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADT--DGDGRISFQEFAQAIT 154
F+ FDR+G GFI+ AEL H + LG L+ E++ +I+ D D +G + +++F + +
Sbjct: 90 FKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVM 149
Query: 155 SAAF 158
+ +
Sbjct: 150 AGPY 153
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 97 FRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADT--DGDGRISFQEFAQAIT 154
F+ FDR+G GFI+ AEL H + LG L+ E++ +I+ D D +G + +++F + +
Sbjct: 88 FKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVM 147
Query: 155 SAAF 158
+ +
Sbjct: 148 AGPY 151
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 97 FRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADT--DGDGRISFQEFAQAIT 154
F+ FDR+G GFI+ AEL H + LG L+ E++ +I+ D D +G + +++F + +
Sbjct: 87 FKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVM 146
Query: 155 SAAF 158
+ +
Sbjct: 147 AGPY 150
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 49 SPDQLETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFI 108
+P + ++I D + V FSEF + Y + + +FR +DRD +G I
Sbjct: 61 NPVTVRSIISMFDRENKAGVNFSEFTGV---------WKYITD-WQNVFRTYDRDNSGMI 110
Query: 109 TAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQA 152
EL +++ G+ L+ + +IR+ D G G+I+F +F Q
Sbjct: 111 DKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQG 154
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 41/98 (41%), Gaps = 10/98 (10%)
Query: 14 IAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSEF 73
I + + +FR++DR+N + S + LI+K D G + F +F
Sbjct: 92 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 151
Query: 74 VALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAA 111
+ + ++L +FR +D D +G+I +
Sbjct: 152 I----------QGCIVLQRLTDIFRRYDTDQDGWIQVS 179
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 49 SPDQLETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFI 108
+P + ++I D + V FSEF + Y + + +FR +DRD +G I
Sbjct: 38 NPVTVRSIISMFDRENKAGVNFSEFTGV---------WKYITD-WQNVFRTYDRDNSGMI 87
Query: 109 TAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQA 152
EL +++ G+ L+ + +IR+ D G G+I+F +F Q
Sbjct: 88 DKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQG 131
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 41/98 (41%), Gaps = 10/98 (10%)
Query: 14 IAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSEF 73
I + + +FR++DR+N + S + LI+K D G + F +F
Sbjct: 69 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 128
Query: 74 VALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAA 111
+ + ++L +FR +D D +G+I +
Sbjct: 129 I----------QGCIVLQRLTDIFRRYDTDQDGWIQVS 156
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 49 SPDQLETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFI 108
+P + ++I D + V FSEF + Y + + +FR +DRD +G I
Sbjct: 39 NPVTVRSIISMFDRENKAGVNFSEFTGV---------WKYITD-WQNVFRTYDRDNSGMI 88
Query: 109 TAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQA 152
EL +++ G+ L+ + +IR+ D G G+I+F +F Q
Sbjct: 89 DKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQG 132
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 41/98 (41%), Gaps = 10/98 (10%)
Query: 14 IAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSEF 73
I + + +FR++DR+N + S + LI+K D G + F +F
Sbjct: 70 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 129
Query: 74 VALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAA 111
+ + ++L +FR +D D +G+I +
Sbjct: 130 I----------QGCIVLQRLTDIFRRYDTDQDGWIQVS 157
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 49 SPDQLETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFI 108
+P + ++I D + V FSEF + Y + + +FR +DRD +G I
Sbjct: 42 NPVTVRSIISMFDRENKAGVNFSEFTGV---------WKYITD-WQNVFRTYDRDNSGMI 91
Query: 109 TAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQA 152
EL +++ G+ L+ + +IR+ D G G+I+F +F Q
Sbjct: 92 DKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQG 135
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 41/98 (41%), Gaps = 10/98 (10%)
Query: 14 IAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSEF 73
I + + +FR++DR+N + S + LI+K D G + F +F
Sbjct: 73 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 132
Query: 74 VALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAA 111
+ + ++L +FR +D D +G+I +
Sbjct: 133 I----------QGCIVLQRLTDIFRRYDTDQDGWIQVS 160
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 49 SPDQLETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFI 108
+P + ++I D + V FSEF + Y + + +FR +DRD +G I
Sbjct: 60 NPVTVRSIISMFDRENKAGVNFSEFTGV---------WKYITD-WQNVFRTYDRDNSGMI 109
Query: 109 TAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQA 152
EL +++ G+ L+ + +IR+ D G G+I+F +F Q
Sbjct: 110 DKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQG 153
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 41/98 (41%), Gaps = 10/98 (10%)
Query: 14 IAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSEF 73
I + + +FR++DR+N + S + LI+K D G + F +F
Sbjct: 91 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 150
Query: 74 VALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAA 111
+ + ++L +FR +D D +G+I +
Sbjct: 151 I----------QGCIVLQRLTDIFRRYDTDQDGWIQVS 178
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 91 EQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEF 149
+ + ++F+ FD +G+G I+ +EL ++ LG +A+E+ M+ E DTDGDG I F EF
Sbjct: 3 DDMERIFKRFDTNGDGKISLSELTDALRTLGST-SADEVQRMMAEIDTDGDGFIDFNEF 60
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 51 DQLETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFI 108
D +E + ++ DTN +G + SE + L + S ++++++ D DG+GFI
Sbjct: 3 DDMERIFKRFDTNGDGKISLSELT-----DALRTLGSTSADEVQRMMAEIDTDGDGFI 55
Score = 30.4 bits (67), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 14/62 (22%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 16 ELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSEFVA 75
++ IF+ FD N D S D+++ ++ + DT+ +G ++F+EF++
Sbjct: 4 DMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFIS 62
Query: 76 LV 77
Sbjct: 63 FC 64
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 91 EQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEF 149
+ + ++F+ FD +G+G I+ +EL ++ LG +A+E+ M+ E DTDGDG I F EF
Sbjct: 2 DDMERIFKRFDTNGDGKISLSELTDALRTLGST-SADEVQRMMAEIDTDGDGFIDFNEF 59
Score = 31.2 bits (69), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 51 DQLETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFI 108
D +E + ++ DTN +G + SE + L + S ++++++ D DG+GFI
Sbjct: 2 DDMERIFKRFDTNGDGKISLSELT-----DALRTLGSTSADEVQRMMAEIDTDGDGFI 54
Score = 30.0 bits (66), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 14/62 (22%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 16 ELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSEFVA 75
++ IF+ FD N D S D+++ ++ + DT+ +G ++F+EF++
Sbjct: 3 DMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFIS 61
Query: 76 LV 77
Sbjct: 62 FC 63
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 7/124 (5%)
Query: 13 QIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSE 72
Q+ EL+E F D++ D P D+L ++++ G + F+
Sbjct: 14 QMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKEC----PGQLNFTA 69
Query: 73 FVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGM 132
F+ L E +S P E+ LR F MFD DG GFI L + +G + EE+ +
Sbjct: 70 FLTLFG-EKVSGTDP--EDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNV 126
Query: 133 IREA 136
++A
Sbjct: 127 WKDA 130
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 83 SSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKL---GHELTAEELTGMIREADTD 139
S S S Q++ +FR D D +G++ EL + + K ELT E ++ AD D
Sbjct: 33 SGLSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADND 92
Query: 140 GDGRISFQEFAQAITS 155
GDG+I EF + + S
Sbjct: 93 GDGKIGADEFQEMVHS 108
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 97 FRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADT--DGDGRISFQEFAQAIT 154
F+ FDR+G GFI+ AEL H + LG L+ E++ +I+ D D +G + +++F + +
Sbjct: 87 FKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVM 146
Query: 155 SA 156
+
Sbjct: 147 AG 148
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 10/105 (9%)
Query: 49 SPDQLETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFI 108
+P + ++I D + V FSEF + Y + + +FR +DRD +G I
Sbjct: 42 NPVTVRSIISMFDRENKAGVNFSEFTGV---------WKYITD-WQNVFRTYDRDNSGMI 91
Query: 109 TAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAI 153
EL +++ G+ L+ + +IR+ D G G+I+F +F Q
Sbjct: 92 DKNELKQALSGAGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGC 136
Score = 32.7 bits (73), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 41/98 (41%), Gaps = 10/98 (10%)
Query: 14 IAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSEF 73
I + + +FR++DR+N + S + LI+K D G + F +F
Sbjct: 73 ITDWQNVFRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHDILIRKFDRQGRGQIAFDDF 132
Query: 74 VALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAA 111
+ + ++L +FR +D D +G+I +
Sbjct: 133 I----------QGCIVLQRLTDIFRRYDTDQDGWIQVS 160
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 82 LSSKSPYSEEQLRQLFRMFDRDGNGFITAAELA---HSMAKLGHELTAEELTGMIREADT 138
LSSK+P +Q++++F + D+D +GFI EL + + LT+ E + DT
Sbjct: 35 LSSKTP---DQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDT 91
Query: 139 DGDGRISFQEF 149
DGDG+I +EF
Sbjct: 92 DGDGKIGVEEF 102
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 82 LSSKSPYSEEQLRQLFRMFDRDGNGFITAAELA---HSMAKLGHELTAEELTGMIREADT 138
LSSK+P +Q++++F + D+D +GFI EL + + LT+ E + DT
Sbjct: 36 LSSKTP---DQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDT 92
Query: 139 DGDGRISFQEF 149
DGDG+I +EF
Sbjct: 93 DGDGKIGVEEF 103
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 90 EEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHE-LTAEELTGMIREADTDGDGRISFQE 148
EE++ + F++FD +G+G I E M K+G E LT E+ ++EAD DG+G I E
Sbjct: 7 EEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPE 66
Query: 149 FAQAITSA 156
F I +
Sbjct: 67 FMDLIKKS 74
Score = 30.8 bits (68), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 61 DTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAK 119
D N +G+++F EF ++ + P ++ ++ + + D DGNG I E + K
Sbjct: 18 DANGDGVIDFDEFKFIMQK---VGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKK 73
Score = 27.7 bits (60), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 16 ELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPD-QLETLIQKADTNSNGLVEFSEFV 74
E+ F+ FD N D +P D ++E +++AD + NG+++ EF+
Sbjct: 9 EILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFM 68
Query: 75 ALV 77
L+
Sbjct: 69 DLI 71
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 11/133 (8%)
Query: 20 IFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV---EFSEFVAL 76
+F+ D N D + L+ + + D + NG + EF++F
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 77 VAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREA 136
+ + LS L+ L+++ D DG+G +T E+ K G E AE+ + +A
Sbjct: 65 IQGQDLSDDKI----GLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQ----VMKA 116
Query: 137 DTDGDGRISFQEF 149
D +GDG I+ +EF
Sbjct: 117 DANGDGYITLEEF 129
Score = 27.7 bits (60), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 96 LFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMI-READTDGDGRISFQEFAQ 151
LF+ D +G+G ++ E+ ++K + E+L +I + D DG+G I EFA+
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSK-KRAIKNEQLLQLIFKSIDADGNGEIDQNEFAK 60
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 10/99 (10%)
Query: 61 DTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKL 120
DTN +G V+F EF+A A L+ + E++L+ F+++D DGNG I EL +
Sbjct: 67 DTNKDGFVDFLEFIA--AVNLIMQEK--MEQKLKWYFKLYDADGNGSIDKNELLDMFMAV 122
Query: 121 ----GHE-LTAEELTGMI-READTDGDGRISFQEFAQAI 153
G + L+ EE ++ + D + DG ++ +EF +
Sbjct: 123 QALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGM 161
Score = 33.1 bits (74), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 66 GLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELT 125
GL EF L+ + L+ K+ + + Q++ FD + +GF+ E ++ + E
Sbjct: 35 GLQTLHEFKTLLGLQGLNQKA---NKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKM 91
Query: 126 AEELTGMIREADTDGDGRI 144
++L + D DG+G I
Sbjct: 92 EQKLKWYFKLYDADGNGSI 110
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 67/155 (43%), Gaps = 8/155 (5%)
Query: 9 LDDDQIAELREIFRSFD--RNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNG 66
L D+I E+RE+F FD D P+ Q+ Q T G
Sbjct: 3 LTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVH---QHGGTKKMG 59
Query: 67 LVEFS-EFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELT 125
+ E + + E+ S + + ++ + F+ FDR+G G I++AE+ + + LG +T
Sbjct: 60 EKAYKLEEILPIYEEMSSKDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERIT 119
Query: 126 AEELTGMIREADT--DGDGRISFQEFAQAITSAAF 158
++ + D D DG I +++ + + + F
Sbjct: 120 EDQCNDIFTFCDIREDIDGNIKYEDLMKKVMAGPF 154
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 11/133 (8%)
Query: 20 IFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLV---EFSEFVAL 76
+F+ D N D + L+ + + D + NG + EF++F
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 77 VAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREA 136
+ + LS L+ L+++ D DG+G +T E+ K G E AE+ + +A
Sbjct: 65 IQGQDLSDDKI----GLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQ----VMKA 116
Query: 137 DTDGDGRISFQEF 149
D +GDG I+ +EF
Sbjct: 117 DANGDGYITLEEF 129
Score = 27.7 bits (60), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 96 LFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMI-READTDGDGRISFQEFAQ 151
LF+ D +G+G ++ E+ ++K + E+L +I + D DG+G I EFA+
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSK-KRAIKNEQLLQLIFKSIDADGNGEIDQNEFAK 60
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
Query: 62 TNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELA---HSMA 118
+ G +F ALV + +S+ ++++F+ D D +GFI EL S A
Sbjct: 19 VKAEGSFNHKKFFALVGLKAMSA------NDVKKVFKAIDADASGFIEEEELKFVLKSFA 72
Query: 119 KLGHELTAEELTGMIREADTDGDGRISFQEF 149
G +LT E ++ AD DGDG+I EF
Sbjct: 73 ADGRDLTDAETKAFLKAADKDGDGKIGIDEF 103
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 83 SSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKL---GHELTAEELTGMIREADTD 139
S S S Q++ +FR D D +G++ EL + K ELT E ++ AD D
Sbjct: 34 SGLSKMSANQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADND 93
Query: 140 GDGRISFQEFAQAITS 155
GDG+I +EF + + S
Sbjct: 94 GDGKIGAEEFQEMVHS 109
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 89 SEEQ---LRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRIS 145
SEE+ L++LF+M D D +G IT EL + ++G EL E+ ++ AD D G I
Sbjct: 18 SEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTID 77
Query: 146 FQEFAQA 152
+ EF A
Sbjct: 78 YGEFIAA 84
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin C
At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 92 QLRQLFRMFDRDG-NGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFA 150
+ + F +F +D +G I+ EL M LG T EEL MI E D DG G + F EF
Sbjct: 19 EFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 151 QAITSAAFDNS 161
+ D+S
Sbjct: 79 VMMVRCMKDDS 89
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 22/31 (70%)
Query: 48 PSPDQLETLIQKADTNSNGLVEFSEFVALVA 78
P+P++L+ +I + D + +G V+F EF+ ++
Sbjct: 52 PTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 92 QLRQLFRMFDRDG-NGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFA 150
+ + F +F +D +G I+ EL M LG T EEL MI E D DG G + F EF
Sbjct: 19 EFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 151 QAITSAAFDNS 161
+ D+S
Sbjct: 79 VMMVRCMKDDS 89
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 22/31 (70%)
Query: 48 PSPDQLETLIQKADTNSNGLVEFSEFVALVA 78
P+P++L+ +I + D + +G V+F EF+ ++
Sbjct: 52 PTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 84 SKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGR 143
S+ + L + FR DRDG+ + A E +AKLG L E G+ R+ D +G G
Sbjct: 30 SRGASGIQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGT 89
Query: 144 ISFQEFAQAI 153
+ +EF +A+
Sbjct: 90 LDLEEFLRAL 99
Score = 33.5 bits (75), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 12/104 (11%)
Query: 54 ETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAEL 113
E + +K D N +G ++ EF+ + P + S E + F DR G+G +T +L
Sbjct: 76 EGVCRKWDRNGSGTLDLEEFLRALRPPM----SQAREAVIAAAFAKLDRSGDGVVTVDDL 131
Query: 114 -------AHSMAKLGHELTAEELTGMIREAD-TDGDGRISFQEF 149
AH + G E L + D ++ DG+++ EF
Sbjct: 132 RGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEF 175
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%)
Query: 84 SKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGR 143
S P E+LR+ FR FD+D +G+I +L + M +G+ T EL + ++ + + G
Sbjct: 3 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGH 62
Query: 144 ISFQEFAQAI 153
+ F +F + +
Sbjct: 63 VDFDDFVELM 72
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%)
Query: 12 DQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFS 71
++I ELRE FR FD++ D P+ +L L Q+ + N G V+F
Sbjct: 7 EEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFD 66
Query: 72 EFVALVAPEL 81
+FV L+ P+L
Sbjct: 67 DFVELMGPKL 76
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 17/116 (14%)
Query: 50 PDQLETLIQKA-DTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFI 108
P + T + D N +G +EFSEF+ ++ ++S+ +E+LR F+++D D +G+I
Sbjct: 61 PTKFATFVFNVFDENKDGRIEFSEFIQALS---VTSRGTL-DEKLRWAFKLYDLDNDGYI 116
Query: 109 TAAEL------AHSMAKLGHELTAEELTGMIRE------ADTDGDGRISFQEFAQA 152
T E+ + M EL EE T R D + DG+++ QEF +
Sbjct: 117 TRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEG 172
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 80 ELLSSKSPYSEEQLRQLFRMFDRDG-NGFITAA---ELAHSMAKLGHELTAEELTGMIRE 135
E L+ K+ ++E++++Q ++ F +D +G + AA ++ G + T +
Sbjct: 14 EELTRKTYFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGD--PTKFATFVFNV 71
Query: 136 ADTDGDGRISFQEFAQAITSAA 157
D + DGRI F EF QA++ +
Sbjct: 72 FDENKDGRIEFSEFIQALSVTS 93
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 21/117 (17%)
Query: 53 LETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAE 112
+E + + DTN + ++F E+VA + L + E +L+ F+++D+D NG I E
Sbjct: 61 VEAMFRAFDTNGDNTIDFLEYVAALNLVLRGT----LEHKLKWTFKIYDKDRNGCIDRQE 116
Query: 113 L---AHSMAKL-------------GHELTAEELTGMI-READTDGDGRISFQEFAQA 152
L S+ KL G LT EE+ I D +GDG++S EF +
Sbjct: 117 LLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEG 173
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 87 PYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISF 146
P E+ + F++FD+D G I EL + + LG +L+ EE+ +++ DG +++
Sbjct: 72 PGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK-DGMVNY 130
Query: 147 QEFAQAI 153
+F Q I
Sbjct: 131 HDFVQMI 137
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 9/68 (13%)
Query: 86 SPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRIS 145
SPY +Q F +FDR G G I + + G T E+T E ++ +
Sbjct: 5 SPY-----KQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEIT----EIESTLPAEVD 55
Query: 146 FQEFAQAI 153
++F Q +
Sbjct: 56 MEQFLQVL 63
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 12/104 (11%)
Query: 49 SPDQLETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFI 108
+P + ++I D + V FSEF + Y + + +FR +DRD +G I
Sbjct: 39 NPVTVRSIISMFDRENKAGVNFSEFTGV---------WKYITD-WQNVFRTYDRDNSGMI 88
Query: 109 TAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQA 152
EL +++ G+ L+ + +IR+ D G G+I+F +F Q
Sbjct: 89 DKNELKQALS--GYRLSDQFHDILIRKFDRQGRGQIAFDDFIQG 130
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 41/98 (41%), Gaps = 12/98 (12%)
Query: 14 IAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSEF 73
I + + +FR++DR+N + S + LI+K D G + F +F
Sbjct: 70 ITDWQNVFRTYDRDN--SGMIDKNELKQALSGYRLSDQFHDILIRKFDRQGRGQIAFDDF 127
Query: 74 VALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAA 111
+ + ++L +FR +D D +G+I +
Sbjct: 128 I----------QGCIVLQRLTDIFRRYDTDQDGWIQVS 155
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 28/57 (49%)
Query: 105 NGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAITSAAFDNS 161
+G I+ EL M LG T EEL MI E D DG G + F EF + D+S
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDS 89
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 22/31 (70%)
Query: 48 PSPDQLETLIQKADTNSNGLVEFSEFVALVA 78
P+P++L+ +I + D + +G V+F EF+ ++
Sbjct: 52 PTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac Troponin-I(147-
163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain Of
Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 28/57 (49%)
Query: 105 NGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAITSAAFDNS 161
+G I+ EL M LG T EEL MI E D DG G + F EF + D+S
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDS 89
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 22/31 (70%)
Query: 48 PSPDQLETLIQKADTNSNGLVEFSEFVALVA 78
P+P++L+ +I + D + +G V+F EF+ ++
Sbjct: 52 PTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 65/145 (44%), Gaps = 8/145 (5%)
Query: 13 QIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSE 72
Q+ E +E F+ D++ D + +L++++ +A G + F+
Sbjct: 55 QVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEA----PGPINFTM 110
Query: 73 FVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGM 132
F+ + + + E+ + F +FD +G+G L S+ G + + +E+
Sbjct: 111 FLTIFGDRIAGTDE---EDVIVNAFNLFD-EGDGKCKEETLKRSLTTWGEKFSQDEVDQA 166
Query: 133 IREADTDGDGRISFQEFAQAITSAA 157
+ EA DG+G I ++FAQ +T A
Sbjct: 167 LSEAPIDGNGLIDIKKFAQILTKGA 191
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 29/57 (50%)
Query: 105 NGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAITSAAFDNS 161
+G I+ EL M LG T EEL MI E D DG G + F EF + + D+S
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDS 89
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 22/31 (70%)
Query: 48 PSPDQLETLIQKADTNSNGLVEFSEFVALVA 78
P+P++L+ +I + D + +G V+F EF+ ++
Sbjct: 52 PTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 89 SEEQLRQLFRMFDRDGNGFITAAELAHSMAKL---GHELTAEELTGMIREADTDGDGRIS 145
S + ++++F M D+D +GFI EL + +L+A+E ++ D DGDG+I
Sbjct: 40 SADDVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDGKIG 99
Query: 146 FQEFAQAI 153
EF+ +
Sbjct: 100 VDEFSTLV 107
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 66 GLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKL---GH 122
G ++ F LV L K+ + Q++++F + D+D +GFI EL + G
Sbjct: 22 GTFDYKRFFHLVG---LKGKT---DAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGR 75
Query: 123 ELTAEELTGMIREADTDGDGRISFQEFAQAITSA 156
+L E ++ D+D DG+I EFA+ + A
Sbjct: 76 DLNDTETKALLAAGDSDHDGKIGADEFAKMVAQA 109
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 89 SEEQLRQLFRMFDRDGNGFITAAELAHSMAKL---GHELTAEELTGMIREADTDGDGRIS 145
S + ++++F + D+D +GFI EL + +L+A+E ++ D DGDG+I
Sbjct: 39 SADDVKKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIG 98
Query: 146 FQEFAQAI 153
+EF+ +
Sbjct: 99 VEEFSTLV 106
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 28/57 (49%)
Query: 105 NGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAITSAAFDNS 161
+G I+ EL M LG T EEL MI E D DG G + F E+ + D+S
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWLVMMVRCMKDDS 89
Score = 29.6 bits (65), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 9/31 (29%), Positives = 22/31 (70%)
Query: 48 PSPDQLETLIQKADTNSNGLVEFSEFVALVA 78
P+P++L+ +I + D + +G V+F E++ ++
Sbjct: 52 PTPEELQEMIDEVDEDGSGTVDFDEWLVMMV 82
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 89
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 29/57 (50%)
Query: 105 NGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAITSAAFDNS 161
+G I+ EL M LG T EEL MI E D DG G + F EF + + D+S
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDS 89
Score = 31.2 bits (69), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 22/31 (70%)
Query: 48 PSPDQLETLIQKADTNSNGLVEFSEFVALVA 78
P+P++L+ +I + D + +G V+F EF+ ++
Sbjct: 52 PTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 89 SEEQLRQLFRMFDRDGNGFITAAELAHSMAKL---GHELTAEELTGMIREADTDGDGRIS 145
S + ++++F + D+D +GFI EL + +L+A+E ++ D DGDG+I
Sbjct: 3 SADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIG 62
Query: 146 FQEFAQAI 153
+EF+ +
Sbjct: 63 VEEFSTLV 70
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 89 SEEQLRQLFRMFDRDGNGFITAAELAHSMAKL---GHELTAEELTGMIREADTDGDGRIS 145
S + ++++F + D+D +GFI EL + +L+A+E ++ D DGDG+I
Sbjct: 39 SADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIG 98
Query: 146 FQEFAQAI 153
+EF+ +
Sbjct: 99 VEEFSTLV 106
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 28/57 (49%)
Query: 105 NGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAITSAAFDNS 161
+G I+ EL M LG T EEL MI E D DG G + F E+ + D+S
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWLVMMARCMKDDS 89
Score = 31.2 bits (69), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 23/31 (74%)
Query: 48 PSPDQLETLIQKADTNSNGLVEFSEFVALVA 78
P+P++L+ +I + D + +G V+F E++ ++A
Sbjct: 52 PTPEELQEMIDEVDEDGSGTVDFDEWLVMMA 82
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 9/80 (11%)
Query: 79 PELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMA-KLGHELTAEELTGM----I 133
PE L+S+ +L F+++D D +G I+ E+ + +G ++T E+L + +
Sbjct: 106 PEPLNSR----RNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTV 161
Query: 134 READTDGDGRISFQEFAQAI 153
+EAD DGDG +SF EF +++
Sbjct: 162 QEADEDGDGAVSFVEFTKSL 181
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 93 LRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQ 151
L+ L+++ D DG+G +T E+ K G E AE+ + +AD +GDG I+ +EF +
Sbjct: 7 LKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQ----VMKADANGDGYITLEEFLE 61
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 89 SEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHE---LTAEELTGMIREADTDGDGRIS 145
S + ++++F + D+D +GFI EL + + L+A+E ++ D DGDG+I
Sbjct: 39 SADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKTLMAAGDKDGDGKIG 98
Query: 146 FQEFAQAI 153
+EF+ +
Sbjct: 99 VEEFSTLV 106
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 28/56 (50%)
Query: 105 NGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAITSAAFDN 160
+G I+ EL M LG T EEL MI E D DG G + F EF + + D+
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDD 88
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 22/31 (70%)
Query: 48 PSPDQLETLIQKADTNSNGLVEFSEFVALVA 78
P+P++L+ +I + D + +G V+F EF+ ++
Sbjct: 52 PTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 61 DTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKL 120
D NG++EF EFV + + +P E+++ F+++D GFI EL + L
Sbjct: 84 DVKRNGVIEFGEFVRSLG--VFHPSAPV-HEKVKFAFKLYDLRQTGFIEREELKEMVVAL 140
Query: 121 GHE----LTAEELTGMI----READTDGDGRISFQEFAQAIT 154
HE L+ + + M+ +AD DG+I E+ ++
Sbjct: 141 LHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVS 182
Score = 27.7 bits (60), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 79 PELLSSKSPYSEEQLRQLFRMFDRDG-----NGFITAAE--LAHSMAKLGHELTAEELTG 131
PELL+S +P++ E++ L+ +F + +G I E LA + L A+ +
Sbjct: 22 PELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFRNRNRRNLFADRIFD 81
Query: 132 MIREADTDGDGRISFQEFAQAI 153
+ D +G I F EF +++
Sbjct: 82 VF---DVKRNGVIEFGEFVRSL 100
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 61 DTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKL 120
D NG++EF EFV + + +P E+++ F+++D GFI EL + L
Sbjct: 84 DVKRNGVIEFGEFVRSLG--VFHPSAPV-HEKVKFAFKLYDLRQTGFIEREELKEMVVAL 140
Query: 121 GHE----LTAEELTGMI----READTDGDGRISFQEFAQAIT 154
HE L+ + + M+ +AD DG+I E+ ++
Sbjct: 141 LHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVS 182
Score = 27.7 bits (60), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 79 PELLSSKSPYSEEQLRQLFRMFDRDG-----NGFITAAE--LAHSMAKLGHELTAEELTG 131
PELL+S +P++ E++ L+ +F + +G I E LA + L A+ +
Sbjct: 22 PELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFRNRNRRNLFADRIFD 81
Query: 132 MIREADTDGDGRISFQEFAQAI 153
+ D +G I F EF +++
Sbjct: 82 VF---DVKRNGVIEFGEFVRSL 100
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 36/60 (60%)
Query: 90 EEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEF 149
+++ ++ F++FD+D + +TA EL M LG T ++++ ++++ D D G+ + F
Sbjct: 13 QQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQETF 72
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 89 SEEQLRQLFRMFDRDGNGFITAAELAHSMAKL---GHELTAEELTGMIREADTDGDGRIS 145
S + ++++F + D+D +GFI EL + +L+A+E ++ D DG G+I
Sbjct: 39 SADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGSGKIE 98
Query: 146 FQEFAQAI 153
+EF+ +
Sbjct: 99 VEEFSTLV 106
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 9/81 (11%)
Query: 78 APELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKL-GHELTAEELTGM---- 132
PE L+S+S +L FR++D D + I+ EL + + G ++ E+L +
Sbjct: 104 GPEPLNSRS----NKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRT 159
Query: 133 IREADTDGDGRISFQEFAQAI 153
I+EAD DGD ISF EF + +
Sbjct: 160 IQEADQDGDSAISFTEFVKVL 180
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 9/81 (11%)
Query: 78 APELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKL-GHELTAEELTGM---- 132
PE L+S+S +L FR++D D + I+ EL + + G ++ E+L +
Sbjct: 104 GPEPLNSRS----NKLHFAFRLYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRT 159
Query: 133 IREADTDGDGRISFQEFAQAI 153
I+EAD DGD ISF EF + +
Sbjct: 160 IQEADQDGDSAISFTEFVKVL 180
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Query: 92 QLRQLFRMFDRDGNGFITAAELAHSMAK------LGHELTAEELTGMIREADTDGDGRIS 145
+L F+ D +G+G++TA EL M L + E +I+ AD + DG+IS
Sbjct: 8 ELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKIS 67
Query: 146 FQEFAQA 152
+EF A
Sbjct: 68 KEEFLNA 74
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 62/149 (41%), Gaps = 8/149 (5%)
Query: 13 QIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSE 72
QI E++E F D+N D P +L ++++A G + F+
Sbjct: 17 QIQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEA----PGPLNFTM 72
Query: 73 FVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGM 132
F+++ + +L + S EE +R F MFD + + + +G +E+
Sbjct: 73 FLSIFSDKLSGTDS---EETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMT 129
Query: 133 IREADTDGDGRISFQEFAQAITSAAFDNS 161
+EA +G G+ + F I + D++
Sbjct: 130 FKEAPVEG-GKFDYVRFVAMIKGSGDDDA 157
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 25/57 (43%)
Query: 105 NGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAITSAAFDNS 161
+G I+ EL LG T EEL I E D DG G + F EF D+S
Sbjct: 33 DGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGTVDFDEFLVXXVRCXKDDS 89
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 48 PSPDQLETLIQKADTNSNGLVEFSEFVA 75
P+P++L+ I + D + +G V+F EF+
Sbjct: 52 PTPEELQEXIDEVDEDGSGTVDFDEFLV 79
>pdb|1K95|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|B Chain B, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
Length = 165
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 15/109 (13%)
Query: 49 SPDQLET---LIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGN 105
SP LET +I D + G + F+ F EL ++ + + E F D+DG+
Sbjct: 35 SPFSLETCRIMIAMLDRDHTGKMGFNAF-----KELWAALNAWKEN-----FMTVDQDGS 84
Query: 106 GFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAIT 154
G + EL ++ +G+ L+ + LT +++ +GRI F ++
Sbjct: 85 GTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSK--NGRIFFDDYVACCV 131
>pdb|1F4O|A Chain A, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4O|B Chain B, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4Q|A Chain A, Crystal Structure Of Apo Grancalcin
pdb|1F4Q|B Chain B, Crystal Structure Of Apo Grancalcin
Length = 165
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 15/109 (13%)
Query: 49 SPDQLET---LIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGN 105
SP LET +I D + G + F+ F EL ++ + + E F D+DG+
Sbjct: 35 SPFSLETCRIMIAMLDRDHTGKMGFNAF-----KELWAALNAWKEN-----FMTVDQDGS 84
Query: 106 GFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAIT 154
G + EL ++ +G+ L+ + LT +++ +GRI F ++
Sbjct: 85 GTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSK--NGRIFFDDYVACCV 131
>pdb|3LCP|C Chain C, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
pdb|3LCP|D Chain D, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
Length = 93
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 12/71 (16%)
Query: 95 QLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE------------LTGMIREADTDGDG 142
F+M D DGN + EL+ ++ + E +E+ + G++R+ D + DG
Sbjct: 22 HYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDG 81
Query: 143 RISFQEFAQAI 153
I + EFA+++
Sbjct: 82 YIDYAEFAKSL 92
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 58/140 (41%), Gaps = 8/140 (5%)
Query: 14 IAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSEF 73
+ E++E F D+N D P +L ++++A G + F+ F
Sbjct: 1 MQEMKEAFTMIDQNRDGFIDINDLKEEFSSLGRTPDDKELTAMLKEAP----GPLNFTMF 56
Query: 74 VALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMI 133
+++ + +L + S EE +R F MFD D + + + +G +E+
Sbjct: 57 LSIFSDKLSGTDS---EETIRNAFGMFDEDATKKLNIEYIKDLLENMGDNFNKDEMRMTF 113
Query: 134 READTDGDGRISFQEFAQAI 153
+EA +G G+ + F I
Sbjct: 114 KEAPVEG-GKFDYVRFVAMI 132
>pdb|2VRG|A Chain A, Structure Of Human Mcfd2
Length = 124
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 12/71 (16%)
Query: 95 QLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE------------LTGMIREADTDGDG 142
F+M D DGN + EL+ ++ + E +E+ + G++R+ D + DG
Sbjct: 53 HYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDG 112
Query: 143 RISFQEFAQAI 153
I + EFA+++
Sbjct: 113 YIDYAEFAKSL 123
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 16/111 (14%)
Query: 54 ETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAE- 112
E + D + NG ++F EF+ ++ ++S+ + ++L F+++D D NG I+ E
Sbjct: 66 EYVFNVFDADKNGYIDFKEFICALS---VTSRGELN-DKLIWAFQLYDLDNNGLISYDEM 121
Query: 113 ---------LAHSMAKLGHELTAEE--LTGMIREADTDGDGRISFQEFAQA 152
+ SM KL + E + + D + DG+++ +EF +
Sbjct: 122 LRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEG 172
Score = 30.4 bits (67), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 28/58 (48%)
Query: 96 LFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAI 153
+F +FD D NG+I E +++ ++L + D D +G IS+ E + +
Sbjct: 68 VFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIV 125
Score = 26.9 bits (58), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 51 DQLETLIQKADTNSNGLVEFSEFVALV--APELLSS--KSP----YSEEQLRQLFRMFDR 102
D+L Q D ++NGL+ + E + +V +++ S K P E+++ ++F M D+
Sbjct: 99 DKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDK 158
Query: 103 DGNGFITAAELA 114
+ +G +T E
Sbjct: 159 NKDGQLTLEEFC 170
>pdb|3A4U|B Chain B, Crystal Structure Of Mcfd2 In Complex With Carbohydrate
Recognition Domain Of Ergic-53
Length = 143
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 12/71 (16%)
Query: 95 QLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE------------LTGMIREADTDGDG 142
F+M D DGN + EL+ ++ + E +E+ + G++R+ D + DG
Sbjct: 72 HYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDG 131
Query: 143 RISFQEFAQAI 153
I + EFA+++
Sbjct: 132 YIDYAEFAKSL 142
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 75 ALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKL---GHELTAEELTG 131
A A L+SKS + +++ F + D+D +GFI EL + LT E
Sbjct: 29 AFFAKVGLTSKSA---DDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKT 85
Query: 132 MIREADTDGDGRISFQEFAQAITS 155
++ D+DGDG+I EF + +
Sbjct: 86 FLKAGDSDGDGKIGVDEFTALVKA 109
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 51/109 (46%), Gaps = 16/109 (14%)
Query: 56 LIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAH 115
L D ++NG + F EF+ +++ ++ EE+L F ++D + +G+IT E+
Sbjct: 68 LFTVFDKDNNGFIHFEEFITVLS----TTSRGTLEEKLSWAFELYDLNHDGYITFDEMLT 123
Query: 116 SMAK----LGHELTAEE--------LTGMIREADTDGDGRISFQEFAQA 152
+A +G +T E + + + D + DG I+ EF +
Sbjct: 124 IVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREG 172
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 28/62 (45%)
Query: 95 QLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAIT 154
LF +FD+D NGFI E ++ E+L+ D + DG I+F E +
Sbjct: 67 HLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVA 126
Query: 155 SA 156
S
Sbjct: 127 SV 128
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/103 (19%), Positives = 47/103 (45%), Gaps = 8/103 (7%)
Query: 19 EIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSEFVALVA 78
+F FD++N+ ++L + D N +G + F E + +VA
Sbjct: 67 HLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVA 126
Query: 79 P--ELLSSKSPYSEEQ------LRQLFRMFDRDGNGFITAAEL 113
+++ S +E++ ++++F++ D++ +G+IT E
Sbjct: 127 SVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEF 169
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 72 EFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELA---HSMAKLGHELTAEE 128
EF A V L+SKS + +++ F + D+D +GFI EL + + LT E
Sbjct: 28 EFFAKVG---LASKSL---DDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAE 81
Query: 129 LTGMIREADTDGDGRISFQEFAQAITS 155
+ + D DGDG I EFA I +
Sbjct: 82 TKAFLADGDKDGDGMIGVDEFAAMIKA 108
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Query: 54 ETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQL-FRMFDRDGNGFITAAE 112
E L ++ D N +G V + E A V S K EQL QL F+ D DGNG I E
Sbjct: 3 EALFKEIDVNGDGAVSYEEVKAFV-----SKKRAIKNEQLLQLIFKSIDADGNGEIDQNE 57
Query: 113 LAH 115
A
Sbjct: 58 FAK 60
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 96 LFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMI-READTDGDGRISFQEFAQ 151
LF+ D +G+G ++ E+ ++K + E+L +I + D DG+G I EFA+
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSK-KRAIKNEQLLQLIFKSIDADGNGEIDQNEFAK 60
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 7/106 (6%)
Query: 51 DQLETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITA 110
++L+ +I++A +G + F+ F+ + +L K E+ + F++ D DG G I
Sbjct: 44 EELDAMIKEA----SGPINFTVFLTMFGEKL---KGADPEDVIMGAFKVLDPDGKGSIKK 96
Query: 111 AELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAITSA 156
+ L + G T EE+ M D G + ++ IT
Sbjct: 97 SFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITHG 142
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 7/104 (6%)
Query: 51 DQLETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITA 110
++L+ +I++A +G + F+ F+ + +L K E+ + F++ D DG G I
Sbjct: 62 EELDAMIKEA----SGPINFTVFLTMFGEKL---KGADPEDVIMGAFKVLDPDGKGSIKK 114
Query: 111 AELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAIT 154
+ L + G T EE+ M D G + ++ IT
Sbjct: 115 SFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVIT 158
>pdb|3SIB|A Chain A, Crystal Structure Of Ure3-Binding Protein, Wild-Type
Length = 220
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%)
Query: 92 QLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEF 149
++ Q F DRD +G + EL G L+ + M+R DTD +G ISF EF
Sbjct: 52 RIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEF 109
Score = 30.4 bits (67), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/113 (22%), Positives = 44/113 (38%), Gaps = 10/113 (8%)
Query: 12 DQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFS 71
DQ + + F DR+ + SP +++ DT+ NG + F
Sbjct: 48 DQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFY 107
Query: 72 EFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHEL 124
EF+A+ E LF M DR+ +G + E+ ++ +LG +
Sbjct: 108 EFMAMYK----------FMELAYNLFVMNDRNRSGTLEPHEILPALQQLGFYI 150
>pdb|3SJS|A Chain A, Crystal Structure Of Ure3-Binding Protein From Entamoeba
Histolytica, (D127a,N129a) Mutant, Native Form
pdb|3SIA|A Chain A, Crystal Structure Of Ure3-Binding Protein, (D127a,N129a)
Mutant, Iodide Phased
Length = 220
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%)
Query: 92 QLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEF 149
++ Q F DRD +G + EL G L+ + M+R DTD +G ISF EF
Sbjct: 52 RIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEF 109
Score = 26.2 bits (56), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 10/113 (8%)
Query: 12 DQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFS 71
DQ + + F DR+ + SP +++ DT+ NG + F
Sbjct: 48 DQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFY 107
Query: 72 EFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHEL 124
EF+A+ E LF M R +G + E+ ++ +LG +
Sbjct: 108 EFMAMYK----------FMELAYNLFVMNARARSGTLEPHEILPALQQLGFYI 150
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 59/144 (40%), Gaps = 8/144 (5%)
Query: 13 QIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSE 72
QI E++E F D + D P +L ++++A G + F+
Sbjct: 4 QIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAP----GPLNFTM 59
Query: 73 FVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGM 132
F+++ + +L + S EE +R F MFD + + + +G +E+
Sbjct: 60 FLSIFSDKLSGTDS---EETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMT 116
Query: 133 IREADTDGDGRISFQEFAQAITSA 156
+EA +G G+ + +F I +
Sbjct: 117 FKEAPVEG-GKFDYVKFTAMIKGS 139
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 35.0 bits (79), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 75 ALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKL---GHELTAEELTG 131
A A L+SKS + +++ F + D+D +GFI EL + LT E
Sbjct: 28 AFFAKVGLTSKSA---DDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKT 84
Query: 132 MIREADTDGDGRISFQEFAQAITS 155
++ D+DGDG+I E+ + +
Sbjct: 85 FLKAGDSDGDGKIGVDEWTALVKA 108
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 35.0 bits (79), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 59/145 (40%), Gaps = 8/145 (5%)
Query: 13 QIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSE 72
QI E++E F D + D P +L ++++A G + F+
Sbjct: 5 QIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEA----PGPLNFTM 60
Query: 73 FVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGM 132
F+++ + +L + S EE +R F MFD + + + +G +E+
Sbjct: 61 FLSIFSDKLSGTDS---EETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMT 117
Query: 133 IREADTDGDGRISFQEFAQAITSAA 157
+EA +G G+ + +F I +
Sbjct: 118 FKEAPVEG-GKFDYVKFTAMIKGSG 141
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 139
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 8/141 (5%)
Query: 13 QIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSE 72
QI E++E F D + D P +L ++++A G + F+
Sbjct: 5 QIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEA----PGPLNFTM 60
Query: 73 FVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGM 132
F+++ + +L + S EE +R F MFD + + + +G +E+
Sbjct: 61 FLSIFSDKLSGTDS---EETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMT 117
Query: 133 IREADTDGDGRISFQEFAQAI 153
+EA +G G+ + +F I
Sbjct: 118 FKEAPVEG-GKFDYVKFTAMI 137
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 34.7 bits (78), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 8/141 (5%)
Query: 13 QIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSE 72
QI E++E F D + D P +L ++++A G + F+
Sbjct: 2 QIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEA----PGPLNFTM 57
Query: 73 FVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGM 132
F+++ + +L + S EE +R F MFD + + + +G +E+
Sbjct: 58 FLSIFSDKLSGTDS---EETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMT 114
Query: 133 IREADTDGDGRISFQEFAQAI 153
+EA +G G+ + +F I
Sbjct: 115 FKEAPVEG-GKFDYVKFTAMI 134
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 34.7 bits (78), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 60/150 (40%), Gaps = 8/150 (5%)
Query: 8 NLDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGL 67
L QI E++E F D + D P +L ++++A G
Sbjct: 11 KLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEA----PGP 66
Query: 68 VEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAE 127
+ F+ F+++ + +L + S EE +R F MFD + + + +G +
Sbjct: 67 LNFTMFLSIFSDKLSGTDS---EETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKD 123
Query: 128 ELTGMIREADTDGDGRISFQEFAQAITSAA 157
E+ +EA +G G+ + +F I +
Sbjct: 124 EMRMTFKEAPVEG-GKFDYVKFTAMIKGSG 152
>pdb|3H4S|E Chain E, Structure Of The Complex Of A Mitotic Kinesin With Its
Calcium Binding Regulator
Length = 135
Score = 34.7 bits (78), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 107 FITAAELAHSMAKLGHE-LTAEELTGMIREADTDGDGRISFQEFA 150
ITA L + LG E ++ E+ GM+RE D DGDG ++ EF
Sbjct: 56 LITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFC 100
>pdb|1QXP|A Chain A, Crystal Structure Of A Mu-Like Calpain
pdb|1QXP|B Chain B, Crystal Structure Of A Mu-Like Calpain
Length = 900
Score = 34.7 bits (78), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Query: 88 YSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQ 147
+S E R + + DRDGNG + E ++ + LT + R+ D D G +S
Sbjct: 574 FSLESCRSMVNLMDRDGNGKLGLVEFNILWNRIRNYLT------IFRKFDLDKSGSMSAY 627
Query: 148 EFAQAITSAAF 158
E AI +A F
Sbjct: 628 EMRMAIEAAGF 638
>pdb|2LVV|A Chain A, Nmr Structure Of Tb24
Length = 226
Score = 34.7 bits (78), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 13/92 (14%)
Query: 67 LVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKL---GHE 123
LVEF EF ++ Y +L +F D+DG+ + E ++ KL G +
Sbjct: 116 LVEFLEFRLMLC-------YIYDIFELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVD 168
Query: 124 LTAEELTGMIREADTDGDGRISFQEF-AQAIT 154
+T + T + E DT+G G ++F EF A+T
Sbjct: 169 IT--DATTVFNEIDTNGSGVVTFDEFSCWAVT 198
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 34.7 bits (78), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 57/149 (38%), Gaps = 8/149 (5%)
Query: 9 LDDDQIAELREIFRSFDRNNDXXXXXXXXXXX-XXXXXXKPSPDQLETLIQKADTNSNGL 67
D QI + +E F D+N D ++L+ +I++A +G
Sbjct: 6 FDQTQIQDFKEAFTVIDQNRDGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGP 61
Query: 68 VEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAE 127
+ F+ F+ + +L K E+ + F++ D DG G I + L + T E
Sbjct: 62 INFTVFLTMFGEKL---KGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTQCDRFTPE 118
Query: 128 ELTGMIREADTDGDGRISFQEFAQAITSA 156
E+ M D G + ++ IT
Sbjct: 119 EIKNMWAAFPPDVAGNVDYKNICYVITHG 147
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 161
Score = 34.7 bits (78), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/148 (20%), Positives = 61/148 (41%), Gaps = 8/148 (5%)
Query: 14 IAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSEF 73
+ E++E F D+N D P +L ++++A G + F+ F
Sbjct: 22 MQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEA----PGPLNFTMF 77
Query: 74 VALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMI 133
+++ + +L + S EE +R F MFD + + + +G +E+
Sbjct: 78 LSIFSDKLSGTDS---EETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMTF 134
Query: 134 READTDGDGRISFQEFAQAITSAAFDNS 161
+EA +G G+ + F I + D++
Sbjct: 135 KEAPVEG-GKFDYVRFVAMIKGSGDDDA 161
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 34.7 bits (78), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/148 (20%), Positives = 61/148 (41%), Gaps = 8/148 (5%)
Query: 14 IAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGLVEFSEF 73
+ E++E F D+N D P +L ++++A G + F+ F
Sbjct: 22 MQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEA----PGPLNFTMF 77
Query: 74 VALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMI 133
+++ + +L + S EE +R F MFD + + + +G +E+
Sbjct: 78 LSIFSDKLSGTDS---EETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMTF 134
Query: 134 READTDGDGRISFQEFAQAITSAAFDNS 161
+EA +G G+ + F I + D++
Sbjct: 135 KEAPVEG-GKFDYVRFVAMIKGSGDDDA 161
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 34.3 bits (77), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 48/110 (43%), Gaps = 16/110 (14%)
Query: 56 LIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAEL-- 113
L DT G V+F +FV ++ L + E+LR F ++D + +G+I E+
Sbjct: 58 LFNAFDTTQTGSVKFEDFVTALSILLRGT----VHEKLRWTFNLYDINKDGYINKEEMMD 113
Query: 114 ----------AHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAI 153
A++ L + + + ++ D + DG ++ EF ++
Sbjct: 114 IVKAIYDMMGAYTYPVLAEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESC 163
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 34.3 bits (77), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 73 FVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELA---HSMAKLGHELTAEEL 129
+ A A L++KS + +++ F + D+D +GFI EL + LT E
Sbjct: 27 YKAFFAKVGLTAKSA---DDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAET 83
Query: 130 TGMIREADTDGDGRISFQEFAQAITS 155
++ D+DGDG I E+A + +
Sbjct: 84 KAFLKAGDSDGDGAIGVDEWAALVKA 109
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
Length = 76
Score = 33.9 bits (76), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 85 KSPYSEEQLRQLFRMFD-RDGN-GFITAAELAHSMAKLGHELTA--EELTGMIREADTDG 140
KSP E+++ F +F ++G+ I+ EL M LG L L MI E D +G
Sbjct: 2 KSP---EEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNG 58
Query: 141 DGRISFQEF 149
DG +SF+EF
Sbjct: 59 DGEVSFEEF 67
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 33.9 bits (76), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 11/101 (10%)
Query: 61 DTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFI--------TAAE 112
DT NG++ F EF A + +P ++++ F+++D GFI A
Sbjct: 64 DTKHNGILGFEEFAR--ALSVFHPNAPI-DDKIHFSFQLYDLKQQGFIERQEVKQMVVAT 120
Query: 113 LAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAI 153
LA S L + + + EADT DG+I +E+ +
Sbjct: 121 LAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLV 161
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 10/83 (12%)
Query: 79 PELLSSKSPYSEEQLRQLFRMFDRDG-----NGFITAAELAHSMAKLGHE--LTAEELTG 131
PELL+ + +S ++ L+ +F + +G I E ++ K + L A+ +
Sbjct: 2 PELLARDTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFD 61
Query: 132 MIREADTDGDGRISFQEFAQAIT 154
+ DT +G + F+EFA+A++
Sbjct: 62 LF---DTKHNGILGFEEFARALS 81
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 33.5 bits (75), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 73 FVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMA--KLG-HELTAEEL 129
+ A A LS KS + +++ F D+D +GFI EL + K G LT E
Sbjct: 27 YKAFFAKCGLSGKSA---DDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAET 83
Query: 130 TGMIREADTDGDGRISFQEFAQAITS 155
++ D+DGDG I +E+ + +
Sbjct: 84 KAFLKAGDSDGDGAIGVEEWVALVKA 109
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 33.5 bits (75), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 73 FVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMA--KLG-HELTAEEL 129
+ A A LS KS + +++ F D+D +GFI EL + K G LT E
Sbjct: 26 YKAFFAKCGLSGKSA---DDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAET 82
Query: 130 TGMIREADTDGDGRISFQEFAQAITS 155
++ D+DGDG I +E+ + +
Sbjct: 83 KAFLKAGDSDGDGAIGVEEWVALVKA 108
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 33.5 bits (75), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 11/101 (10%)
Query: 61 DTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFI--------TAAE 112
DT NG++ F EF A + +P ++++ F+++D GFI A
Sbjct: 95 DTKHNGILGFEEFAR--ALSVFHPNAPI-DDKIHFSFQLYDLKQQGFIERQEVKQMVVAT 151
Query: 113 LAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAI 153
LA S L + + + EADT DG+I +E+ +
Sbjct: 152 LAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLV 192
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 10/83 (12%)
Query: 79 PELLSSKSPYSEEQLRQLFRMFDRDG-----NGFITAAELAHSMAKLGHE--LTAEELTG 131
PELL+ + +S ++ L+ +F + +G I E ++ K + L A+ +
Sbjct: 33 PELLARDTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFD 92
Query: 132 MIREADTDGDGRISFQEFAQAIT 154
+ DT +G + F+EFA+A++
Sbjct: 93 LF---DTKHNGILGFEEFARALS 112
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 33.5 bits (75), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 10/110 (9%)
Query: 52 QLETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAA 111
+L + DT+ +G + E A L S+ P+S +L M+D++ +G IT
Sbjct: 28 ELMEWFRAVDTDGSGAISVPELNA----ALSSAGVPFSLATTEKLLHMYDKNHSGEITFD 83
Query: 112 ELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAITSAAFDNS 161
E K H G R+ D+ GDGR+ E A+ S+ + S
Sbjct: 84 EF-----KDLHHFILSMREG-FRKRDSSGDGRLDSNEVRAALLSSGYQVS 127
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%)
Query: 91 EQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEF 149
++L + FR D DG+G I+ EL +++ G + ++ D + G I+F EF
Sbjct: 27 QELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEF 85
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 19/37 (51%)
Query: 127 EELTGMIREADTDGDGRISFQEFAQAITSAAFDNSWA 163
+EL R DTDG G IS E A++SA S A
Sbjct: 27 QELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLA 63
Score = 26.9 bits (58), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 42/125 (33%), Gaps = 28/125 (22%)
Query: 8 NLDDDQIAELREIFRSFDRNNDXXXXXXXXXXXXXXXXXKPSPDQLETLIQKADTNSNGL 67
+++D+Q EL E FR+ D + S E L+ D N +G
Sbjct: 22 HMNDNQ--ELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGE 79
Query: 68 VEFSEFVAL--------------------------VAPELLSSKSPYSEEQLRQLFRMFD 101
+ F EF L V LLSS SE+ + L R FD
Sbjct: 80 ITFDEFKDLHHFILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFD 139
Query: 102 RDGNG 106
R G
Sbjct: 140 RQRRG 144
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 33.5 bits (75), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 61 DTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKL 120
D+N +G ++F E+V L + + + ++L F ++D DGNG I+ E+ + +
Sbjct: 81 DSNLDGTLDFKEYVIA----LHXTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVXAI 136
Query: 121 GHELTAEEL 129
+T E++
Sbjct: 137 FKXITPEDV 145
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 33.1 bits (74), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 9/67 (13%)
Query: 97 FRMFDRDGNGFITAAELAHSMAKLGHE-----LTAEELTGMI----READTDGDGRISFQ 147
FR+FD D +G + +L+ + L E L+A E+ +I E+D D DG I+
Sbjct: 104 FRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLS 163
Query: 148 EFAQAIT 154
EF I+
Sbjct: 164 EFQHVIS 170
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 33.1 bits (74), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 28/60 (46%)
Query: 94 RQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAI 153
+++F FD++ +G ++ E T E++ E D DG+G ++ EF I
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCI 63
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 33.1 bits (74), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 61 DTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKL 120
D NS+G ++F E+V +A + S+ + ++L F ++D DGNG I+ E+ + +
Sbjct: 74 DANSDGTLDFKEYV--IALHMTSAGK--TNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 129
Query: 121 GHELTAEELTGMIREADT 138
++ E+ + + +T
Sbjct: 130 FKMISPEDTKHLPEDENT 147
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 29/62 (46%)
Query: 94 RQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAI 153
+ +FR FD + +G + E ++ T ++L D DG+G IS E + +
Sbjct: 67 QHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIV 126
Query: 154 TS 155
T+
Sbjct: 127 TA 128
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 33.1 bits (74), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 61 DTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKL 120
D NS+G ++F E+V +A + S+ + ++L F ++D DGNG I+ E+ + +
Sbjct: 73 DANSDGTLDFKEYV--IALHMTSAGK--TNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
Query: 121 GHELTAEELTGMIREADT 138
++ E+ + + +T
Sbjct: 129 FKMISPEDTKHLPEDENT 146
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 29/62 (46%)
Query: 94 RQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAI 153
+ +FR FD + +G + E ++ T ++L D DG+G IS E + +
Sbjct: 66 QHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIV 125
Query: 154 TS 155
T+
Sbjct: 126 TA 127
>pdb|1JUO|A Chain A, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
pdb|1JUO|B Chain B, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
Length = 198
Score = 33.1 bits (74), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 15/108 (13%)
Query: 50 PDQLET---LIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNG 106
P LET ++ D + +G + F+EF L A +L+ RQ F FD D +G
Sbjct: 69 PFNLETCRLMVSMLDRDMSGTMGFNEFKELWA--VLNG--------WRQHFISFDTDRSG 118
Query: 107 FITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAIT 154
+ EL ++ +G L+ + + + + T +G+I+F ++
Sbjct: 119 TVDPQELQKALTTMGFRLSPQAVNSIAKRYST--NGKITFDDYIACCV 164
Score = 26.2 bits (56), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 14/88 (15%)
Query: 75 ALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLG----HELTAEELT 130
L + P++ E R + M DRD +G + E A L H ++
Sbjct: 57 CLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISF---- 112
Query: 131 GMIREADTDGDGRISFQEFAQAITSAAF 158
DTD G + QE +A+T+ F
Sbjct: 113 ------DTDRSGTVDPQELQKALTTMGF 134
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 33.1 bits (74), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 61 DTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKL 120
D NS+G ++F E+V +A + S+ + ++L F ++D DGNG I+ E+ + +
Sbjct: 73 DANSDGTLDFKEYV--IALHMTSAGK--TNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
Query: 121 GHELTAEELTGMIREADT 138
++ E+ + + +T
Sbjct: 129 FKMISPEDTKHLPEDENT 146
Score = 27.7 bits (60), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 29/62 (46%)
Query: 94 RQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAI 153
+ +FR FD + +G + E ++ T ++L D DG+G IS E + +
Sbjct: 66 QHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIV 125
Query: 154 TS 155
T+
Sbjct: 126 TA 127
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 33.1 bits (74), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 61 DTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKL 120
D NS+G ++F E+V +A + S+ + ++L F ++D DGNG I+ E+ + +
Sbjct: 73 DANSDGTLDFKEYV--IALHMTSAGK--TNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
Query: 121 GHELTAEELTGMIREADT 138
++ E+ + + +T
Sbjct: 129 FKMISPEDTKHLPEDENT 146
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 29/62 (46%)
Query: 94 RQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAI 153
+ +FR FD + +G + E ++ T ++L D DG+G IS E + +
Sbjct: 66 QHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIV 125
Query: 154 TS 155
T+
Sbjct: 126 TA 127
>pdb|1WY9|A Chain A, Crystal Structure Of Microglia-Specific Protein, Iba1
Length = 147
Score = 32.7 bits (73), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%)
Query: 87 PYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISF 146
P E + + FD +GNG I L + KLG T EL +IRE + + S+
Sbjct: 44 PSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSY 103
Query: 147 QEFAQAI 153
+F + +
Sbjct: 104 SDFLRMM 110
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 32.7 bits (73), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 9/69 (13%)
Query: 97 FRMFDRDGNGFITAAELAHSMAKLGHE-----LTAEELTGMI----READTDGDGRISFQ 147
FR+FD D +G + +L+ + L E L+A E+ +I E+D D DG I+
Sbjct: 135 FRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLS 194
Query: 148 EFAQAITSA 156
EF I+ +
Sbjct: 195 EFQHVISRS 203
>pdb|3CS1|A Chain A, Flagellar Calcium-binding Protein (fcabp) From T. Cruzi
Length = 219
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 9/115 (7%)
Query: 47 KPSPDQLETLIQKADTN-SNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGN 105
K + D+ TL K + S VEF EF ++ Y +L +F D GN
Sbjct: 92 KRAFDKSRTLGSKLENKGSEDFVEFLEFRLMLC-------YIYDFFELTVMFDEIDASGN 144
Query: 106 GFITAAELAHSMAKL-GHELTAEELTGMIREADTDGDGRISFQEFAQAITSAAFD 159
+ E ++ KL E+ + +E D +G G ++F EFA ++ D
Sbjct: 145 MLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGSVTFDEFAAWASAVKLD 199
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 48/110 (43%), Gaps = 16/110 (14%)
Query: 56 LIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELA- 114
L DT G V+F +FV ++ L + E+LR F ++D + +G+I E+
Sbjct: 58 LFNAFDTTQTGSVKFEDFVTALSILLRGT----VHEKLRWTFNLYDINKDGYINKEEMMD 113
Query: 115 ------HSMAKLGHELTAEE-----LTGMIREADTDGDGRISFQEFAQAI 153
M K + + E+ + ++ D + DG ++ EF ++
Sbjct: 114 IVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESC 163
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 50/109 (45%), Gaps = 16/109 (14%)
Query: 56 LIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAE--- 112
L DT+ NG V F +F+ ++ L + +E+L F ++D + +G+IT E
Sbjct: 107 LFNAFDTDHNGAVSFEDFIKGLSILLRGT----VQEKLNWAFNLYDINKDGYITKEEMLD 162
Query: 113 ----LAHSMAKLGHELTAEE-----LTGMIREADTDGDGRISFQEFAQA 152
+ M K + + E+ + ++ D + DG ++ EF ++
Sbjct: 163 IMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIES 211
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 78 APELLSSKSPYSEEQLRQLFRMFDRDG-NGFI---TAAELAHSMAKLGHELTAEELTGMI 133
A ELL ++S +++++L+ L+R F + +G + T E+ G T +
Sbjct: 51 ALELLEAQSKFTKKELQILYRGFKNECPSGVVNEETFKEIYSQFFPQGDSTTYAHF--LF 108
Query: 134 READTDGDGRISFQEFAQAIT 154
DTD +G +SF++F + ++
Sbjct: 109 NAFDTDHNGAVSFEDFIKGLS 129
Score = 26.2 bits (56), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Query: 49 SPDQ-LETLIQKADTNSNGLVEFSEFV 74
+P Q +ET QK D N +G+V EF+
Sbjct: 183 APRQHVETFFQKMDKNKDGVVTIDEFI 209
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/109 (21%), Positives = 47/109 (43%), Gaps = 16/109 (14%)
Query: 56 LIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAEL-- 113
L DT G V+F +FV ++ L + E+LR F ++D + +G+I E+
Sbjct: 61 LFNAFDTTQTGSVKFEDFVTALSILLRGT----VHEKLRWTFNLYDINKDGYINKEEMMD 116
Query: 114 ----------AHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQA 152
++ L + + + ++ D + DG ++ EF ++
Sbjct: 117 IVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLES 165
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 61 DTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKL 120
D NS+G ++F ++V +A + S+ + ++L F ++D DGNG I+ E+ + +
Sbjct: 73 DANSDGTLDFKQYV--IALHMTSAGK--TNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
Query: 121 GHELTAEELTGMIREADT 138
++ E+ + + +T
Sbjct: 129 FKMISPEDTKHLPEDENT 146
Score = 26.6 bits (57), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 29/62 (46%)
Query: 94 RQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAI 153
+ +FR FD + +G + + ++ T ++L D DG+G IS E + +
Sbjct: 66 QHVFRSFDANSDGTLDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIV 125
Query: 154 TS 155
T+
Sbjct: 126 TA 127
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 61 DTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKL 120
D NS+G ++F ++V +A + S+ + ++L F ++D DGNG I+ E+ + +
Sbjct: 73 DANSDGTLDFKQYV--IALHMTSAGK--TNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
Query: 121 GHELTAEELTGMIREADT 138
++ E+ + + +T
Sbjct: 129 FKMISPEDTKHLPEDENT 146
Score = 26.6 bits (57), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 29/62 (46%)
Query: 94 RQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAI 153
+ +FR FD + +G + + ++ T ++L D DG+G IS E + +
Sbjct: 66 QHVFRSFDANSDGTLDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIV 125
Query: 154 TS 155
T+
Sbjct: 126 TA 127
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 47/110 (42%), Gaps = 16/110 (14%)
Query: 56 LIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAEL-- 113
L DT G V+F +FV ++ L + E+LR F ++D + +G+I E+
Sbjct: 94 LFNAFDTTQTGSVKFEDFVTALSILLRGT----VHEKLRWTFNLYDINKDGYINKEEMMD 149
Query: 114 ----------AHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAI 153
++ L + + + ++ D + DG ++ EF ++
Sbjct: 150 IVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESC 199
>pdb|1B9A|A Chain A, Parvalbumin (Mutation;d51a, F102w)
Length = 108
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 75 ALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKL---GHELTAEELTG 131
A A L+SKS + +++ F + +D +GFI EL + LT E
Sbjct: 28 AFFAKVGLTSKSA---DDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKT 84
Query: 132 MIREADTDGDGRISFQEFAQAITS 155
++ D+DGDG+I E+ + +
Sbjct: 85 FLKAGDSDGDGKIGVDEWTALVKA 108
>pdb|1GJY|A Chain A, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|B Chain B, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|C Chain C, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|D Chain D, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
Length = 167
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 15/108 (13%)
Query: 50 PDQLET---LIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNG 106
P LET ++ D + +G + F+EF L A +L+ RQ F FD D +G
Sbjct: 38 PFNLETCRLMVSMLDRDMSGTMGFNEFKELWA--VLNG--------WRQHFISFDSDRSG 87
Query: 107 FITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAIT 154
+ EL ++ +G L + + + + T G+I+F ++
Sbjct: 88 TVDPQELQKALTTMGFRLNPQTVNSIAKRYST--SGKITFDDYIACCV 133
>pdb|2X8A|A Chain A, Human Nuclear Valosin Containing Protein Like (Nvl), C-
Terminal Aaa-Atpase Domain
Length = 274
Score = 30.8 bits (68), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 50 PDQLETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFR 98
P +TL+ KA N +GL F+++ PELL+ SE +RQ+F+
Sbjct: 53 PGCGKTLLAKAVANESGL----NFISVKGPELLNMYVGESERAVRQVFQ 97
>pdb|2JC2|A Chain A, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|B Chain B, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|C Chain C, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|D Chain D, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
Length = 198
Score = 30.8 bits (68), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 50 PDQLET---LIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNG 106
P LET ++ D + +G + F+EF L A +L+ RQ F D D +G
Sbjct: 69 PFNLETCRLMVSMLDRDMSGTMGFNEFKELWA--VLNG--------WRQHFISLDTDRSG 118
Query: 107 FITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAIT 154
+ EL ++ +G L+ + + + + T +G+I+F ++
Sbjct: 119 TVDPQELQKALTTMGFRLSPQAVNSIAKRYST--NGKITFDDYIACCV 164
Score = 26.6 bits (57), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 14/88 (15%)
Query: 75 ALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLG----HELTAEELT 130
L + P++ E R + M DRD +G + E A L H ++
Sbjct: 57 CLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISL---- 112
Query: 131 GMIREADTDGDGRISFQEFAQAITSAAF 158
DTD G + QE +A+T+ F
Sbjct: 113 ------DTDRSGTVDPQELQKALTTMGF 134
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 30.4 bits (67), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 12/74 (16%)
Query: 91 EQLRQLFRMFDRDGNGFITAAELA------------HSMAKLGHELTAEELTGMIREADT 138
E+L+ F ++D + +G+IT E+ H+ L + AE + + D
Sbjct: 9 EKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFEKMDR 68
Query: 139 DGDGRISFQEFAQA 152
+ DG ++ +EF +A
Sbjct: 69 NQDGVVTIEEFLEA 82
>pdb|1C07|A Chain A, Structure Of The Third Eps15 Homology Domain Of Human
Eps15
Length = 95
Score = 30.4 bits (67), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 86 SPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRIS 145
SP + + ++F D+D +GF++ E+ K G L + L + DT G++S
Sbjct: 5 SPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTG--LPSTLLAHIWSLCDTKDCGKLS 62
Query: 146 FQEFAQA 152
+FA A
Sbjct: 63 KDQFALA 69
>pdb|1B8C|A Chain A, Parvalbumin
pdb|1B8C|B Chain B, Parvalbumin
pdb|1B8L|A Chain A, Calcium-Bound D51aE101DF102W TRIPLE MUTANT OF BETA CARP
Parvalbumin
Length = 108
Score = 30.4 bits (67), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 75 ALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKL---GHELTAEELTG 131
A A L+SKS + +++ F + +D +GFI EL + LT E
Sbjct: 28 AFFAKVGLTSKSA---DDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKT 84
Query: 132 MIREADTDGDGRISFQEFAQAITS 155
++ D+DGDG+I ++ + +
Sbjct: 85 FLKAGDSDGDGKIGVDDWTALVKA 108
>pdb|1IJ5|A Chain A, Metal-Free Structure Of Multidomain Ef-Hand Protein,
Cbp40, From True Slime Mold
pdb|1IJ6|A Chain A, Ca2+-Bound Structure Of Multidomain Ef-Hand Protein,
Cbp40, From True Slime Mold
Length = 323
Score = 30.4 bits (67), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 12/71 (16%)
Query: 93 LRQLFRMFDRDGNG---FITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEF 149
L++LF M + D G +IT +A+ +A L R+ DT+ +G +S +EF
Sbjct: 160 LKKLFVMVENDTKGRMSYITLVAVANDLAAL---------VADFRKIDTNSNGTLSRKEF 210
Query: 150 AQAITSAAFDN 160
+ FD
Sbjct: 211 REHFVRLGFDK 221
>pdb|1PON|A Chain A, Site Iii-Site Iv Troponin C Heterodimer, Nmr
pdb|1CTA|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTA|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
Length = 36
Score = 30.4 bits (67), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 89 SEEQLRQLFRMFDRDGNGFITAAELAHSMAKLG 121
SEE+L FR+FD++ +G+I EL + G
Sbjct: 3 SEEELANAFRIFDKNADGYIDIEELGEILRATG 35
>pdb|2D58|A Chain A, Human Microglia-Specific Protein Iba1
Length = 107
Score = 30.4 bits (67), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 30/67 (44%)
Query: 87 PYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISF 146
P E ++ + FD +GNG I L + KLG T EL +I E + S+
Sbjct: 28 PSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSY 87
Query: 147 QEFAQAI 153
+F + +
Sbjct: 88 PDFLRMM 94
>pdb|3AKB|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 30.0 bits (66), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 7/103 (6%)
Query: 54 ETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQ---LRQLFRMFDRDGNGFITA 110
+ L AD + + + EFV L ++E L + D DG+G +T
Sbjct: 58 QGLAGIADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTV 117
Query: 111 AELAHSMAKLGHELTAEELTGMIREA-DTDGDGRISFQEFAQA 152
A+ A ++ G E+L A DTDGDG++ E A
Sbjct: 118 ADTARALTAFG---VPEDLARQAAAALDTDGDGKVGETEIVPA 157
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 18/113 (15%)
Query: 61 DTNSNGLVEFSEFV----ALVAPELLSSKSPYSE------EQLRQ-LFRMFDRDGNGFIT 109
D + NG ++ S+F A++A ++++S + E L Q L + DRDG+ IT
Sbjct: 14 DQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQRIT 73
Query: 110 AAELAHSMAKLGH-------ELTAEELTGMIREADTDGDGRISFQEFAQAITS 155
E K E+ L + ADTDGDG ++ + A+A+T+
Sbjct: 74 REEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTA 126
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 15/75 (20%)
Query: 90 EEQLRQLFRMFDRDGNGFITAAELAHSMAKL------------GHEL--TAEEL-TGMIR 134
E ++ F FD+DGNG I ++ + + + G L AE L G+
Sbjct: 3 ERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAG 62
Query: 135 EADTDGDGRISFQEF 149
AD DGD RI+ +EF
Sbjct: 63 IADRDGDQRITREEF 77
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 30.0 bits (66), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 52/118 (44%), Gaps = 14/118 (11%)
Query: 49 SPDQLETLIQKADTNSNGLVEFSEFVALVAPE-----LLSSKSPYSEEQLRQLFRMFDRD 103
SP +++T + + +G + E ++ E L + S E+ + +R +D D
Sbjct: 57 SP-EMKTFVDQYGQRDDGKIGIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTD 115
Query: 104 GNGFITAAELAHSMAKLGHELT--------AEELTGMIREADTDGDGRISFQEFAQAI 153
+GFI EL + + L + AE M++ D++ DG++ E A+ +
Sbjct: 116 HSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLL 173
Score = 30.0 bits (66), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 56 LIQKADTNSNGLVEFSEFVALVAPE---LLSSKS-PYSEEQLRQLFRMFDRDGNGFITAA 111
+++ D+N++G +E +E L+ + LL + ++ + F ++D+DGNG+I
Sbjct: 152 MLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDEN 211
Query: 112 EL 113
EL
Sbjct: 212 EL 213
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
Query: 86 SPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKL-------GHELTAEELTGMIREADT 138
S + Q +++ FD DG+G++ EL + + +L G EL+ E T + +
Sbjct: 11 SLITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQR 70
Query: 139 DGDGRISFQEFAQAI 153
D DG+I E A +
Sbjct: 71 D-DGKIGIVELAHVL 84
>pdb|2G2B|A Chain A, Nmr Structure Of The Human Allograft Inflammatory Factor 1
Length = 150
Score = 29.6 bits (65), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 30/67 (44%)
Query: 87 PYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISF 146
P E ++ + FD +GNG I L + KLG T EL +I E + S+
Sbjct: 47 PSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSY 106
Query: 147 QEFAQAI 153
+F + +
Sbjct: 107 PDFLRMM 113
>pdb|3AKA|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 29.6 bits (65), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 7/103 (6%)
Query: 54 ETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQ---LRQLFRMFDRDGNGFITA 110
+ L AD + + + EFV L ++E L + D DG+G +T
Sbjct: 58 QGLAGIADRDGDQRITREEFVTGAVKRLRDKPDRFAEIARPFLHAALGVADTDGDGAVTV 117
Query: 111 AELAHSMAKLGHELTAEELTGMIREA-DTDGDGRISFQEFAQA 152
A+ A ++ G E+L A DTDGDG++ E A
Sbjct: 118 ADTARALTAFG---VPEDLARQAAAALDTDGDGKVGETEIVPA 157
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 18/113 (15%)
Query: 61 DTNSNGLVEFSEFV----ALVAPELLSSKSPYSE------EQLRQ-LFRMFDRDGNGFIT 109
D + NG ++ S+F AL+A ++++S + E L Q L + DRDG+ IT
Sbjct: 14 DQDGNGHIDRSDFSGAAKALLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQRIT 73
Query: 110 AAELAHSMAKLGH-------ELTAEELTGMIREADTDGDGRISFQEFAQAITS 155
E K E+ L + ADTDGDG ++ + A+A+T+
Sbjct: 74 REEFVTGAVKRLRDKPDRFAEIARPFLHAALGVADTDGDGAVTVADTARALTA 126
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 15/75 (20%)
Query: 90 EEQLRQLFRMFDRDGNGFITAAELAHSMAKL------------GHEL--TAEEL-TGMIR 134
E ++ F FD+DGNG I ++ + + L G L AE L G+
Sbjct: 3 ERRIAARFTTFDQDGNGHIDRSDFSGAAKALLAEFGVAARSDRGQALYGGAEALWQGLAG 62
Query: 135 EADTDGDGRISFQEF 149
AD DGD RI+ +EF
Sbjct: 63 IADRDGDQRITREEF 77
>pdb|2Y5I|A Chain A, S100z From Zebrafish In Complex With Calcium
pdb|2Y5I|B Chain B, S100z From Zebrafish In Complex With Calcium
pdb|2Y5I|C Chain C, S100z From Zebrafish In Complex With Calcium
pdb|2Y5I|D Chain D, S100z From Zebrafish In Complex With Calcium
pdb|2Y5I|E Chain E, S100z From Zebrafish In Complex With Calcium
pdb|2Y5I|F Chain F, S100z From Zebrafish In Complex With Calcium
Length = 99
Score = 29.6 bits (65), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 27/46 (58%)
Query: 50 PDQLETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQ 95
P +E ++ D+N + V+F+EFV LVA ++ + E+Q ++
Sbjct: 52 PMLVEKIMNDLDSNKDNEVDFNEFVVLVAALTVACNDFFQEQQKKR 97
>pdb|2JPT|A Chain A, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
pdb|2JPT|B Chain B, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
Length = 93
Score = 29.6 bits (65), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 18/81 (22%)
Query: 85 KSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRI 144
K S+++L++L + + +GF+ A + A ++ K +++E D DGDG +
Sbjct: 25 KYKLSKKELKELLQ---TELSGFLDAQKDADAVDK------------VMKELDEDGDGEV 69
Query: 145 SFQEF---AQAITSAAFDNSW 162
FQE+ A+T A + W
Sbjct: 70 DFQEYVVLVAALTVACNNFFW 90
>pdb|1J7Q|A Chain A, Solution Structure And Backbone Dynamics Of The Defunct
Ef- Hand Domain Of Calcium Vector Protein
pdb|1J7R|A Chain A, Solution Structure And Backbone Dynamics Of The Defunct
Ef- Hand Domain Of Calcium Vector Protein
Length = 86
Score = 29.6 bits (65), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 12/51 (23%), Positives = 25/51 (49%)
Query: 86 SPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREA 136
P +++ ++F +FDR+ ++ + KLG T E +++EA
Sbjct: 9 GPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEA 59
>pdb|3D64|A Chain A, Crystal Structure Of S-Adenosyl-L-Homocysteine Hydrolase
From Burkholderia Pseudomallei
pdb|3D64|B Chain B, Crystal Structure Of S-Adenosyl-L-Homocysteine Hydrolase
From Burkholderia Pseudomallei
pdb|3GLQ|A Chain A, Crystal Structure Of S-Adenosyl-L-Homocysteine Hydrolase
From Burkholderia Pseudomallei In Complex With 9-Beta-D-
Arabino-Furansyl-Adenine
pdb|3GLQ|B Chain B, Crystal Structure Of S-Adenosyl-L-Homocysteine Hydrolase
From Burkholderia Pseudomallei In Complex With 9-Beta-D-
Arabino-Furansyl-Adenine
Length = 494
Score = 29.6 bits (65), Expect = 0.87, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 14/80 (17%)
Query: 87 PYSEEQLRQLFRMFDR----DGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDG 142
P +EE++ LF+ +R DG+ + + LAH +T E TG+ R + DG
Sbjct: 184 PTNEEEV-ALFKSIERHLEIDGSWY--SKRLAHIKG-----VTEETTTGVHRLYQMEKDG 235
Query: 143 RISFQEF--AQAITSAAFDN 160
R+ F F ++T + FDN
Sbjct: 236 RLPFPAFNVNDSVTKSKFDN 255
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An Ef-Hand
Protein From Danio Rerio Dr.36843
Length = 272
Score = 29.6 bits (65), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 10/69 (14%)
Query: 95 QLFRMFDRDGNGFITAAEL----AHSMAKLG-HELTAEELTGMIREA-----DTDGDGRI 144
Q+++ FD D NG+I EL H + KL + +E I+++ D DGR+
Sbjct: 15 QIWQHFDADDNGYIEGKELDDFFRHXLKKLQPKDKITDERVQQIKKSFXSAYDATFDGRL 74
Query: 145 SFQEFAQAI 153
+E A I
Sbjct: 75 QIEELANXI 83
Score = 27.3 bits (59), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Query: 61 DTNSNGLVEFSEFVALVAPE------LLSSKSPYSEE-QLRQLFRMFDRDGNGFITAAEL 113
D +G ++ E + P+ + ++P + +++R +D D +G+I+AAEL
Sbjct: 67 DATFDGRLQIEELANXILPQEENFLLIFRREAPLDNSVEFXKIWRKYDADSSGYISAAEL 126
Query: 114 AHSMAKL 120
+ + L
Sbjct: 127 KNFLKDL 133
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 96 LFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAITS 155
LF FD DGNG I + ++ L E+L D + DG I+ +E AI
Sbjct: 134 LFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEML-AIMK 192
Query: 156 AAFD 159
+ +D
Sbjct: 193 SIYD 196
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 93 LRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQA 152
++ + M D++ +G I A E A + LG ++ E + DT+G+G +S E A
Sbjct: 104 VKGIVGMCDKNADGQINADEFAAWLTALG--MSKAEAAEAFNQVDTNGNGELSLDELLTA 161
Query: 153 I 153
+
Sbjct: 162 V 162
>pdb|1K2H|A Chain A, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1K2H|B Chain B, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1ZFS|A Chain A, Solution Structure Of S100a1 Bound To Calcium
pdb|1ZFS|B Chain B, Solution Structure Of S100a1 Bound To Calcium
pdb|2K2F|A Chain A, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2K2F|B Chain B, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2KBM|A Chain A, Ca-S100a1 Interacting With Trtk12
pdb|2KBM|B Chain B, Ca-S100a1 Interacting With Trtk12
Length = 93
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 26/44 (59%)
Query: 47 KPSPDQLETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSE 90
+ D ++ ++++ D N +G V+F EFV LVA ++ + + E
Sbjct: 48 QKDADAVDKIMKELDENGDGEVDFQEFVVLVAALTVACNNFFWE 91
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 126 AEELTGMIREADTDGDGRISFQEF---AQAITSAAFDNSW 162
A+ + +++E D +GDG + FQEF A+T A + W
Sbjct: 51 ADAVDKIMKELDENGDGEVDFQEFVVLVAALTVACNNFFW 90
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Query: 61 DTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFI 108
DTN G +++ E + K P ++ +L +DR+GNG+I
Sbjct: 17 DTNKTGSIDYHELKVAMRALGFDVKKP----EILELMNEYDREGNGYI 60
>pdb|2L50|A Chain A, Solution Structure Of Apo S100a16
pdb|2L50|B Chain B, Solution Structure Of Apo S100a16
pdb|2L51|A Chain A, Solution Structure Of Calcium Bound S100a16
pdb|2L51|B Chain B, Solution Structure Of Calcium Bound S100a16
Length = 102
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 112 ELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAI 153
EL H ++ G+ A++L I+ D + DGRISF E+ I
Sbjct: 44 ELNHMLSDTGNRKAADKL---IQNLDANHDGRISFDEYWTLI 82
>pdb|3NXA|A Chain A, X-Ray Structure Of The Apo Form Of Human S100a16
pdb|3NXA|B Chain B, X-Ray Structure Of The Apo Form Of Human S100a16
pdb|3NXA|C Chain C, X-Ray Structure Of The Apo Form Of Human S100a16
pdb|3NXA|D Chain D, X-Ray Structure Of The Apo Form Of Human S100a16
Length = 100
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 112 ELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAI 153
EL H ++ G+ A++L I+ D + DGRISF E+ I
Sbjct: 43 ELNHMLSDTGNRKAADKL---IQNLDANHDGRISFDEYWTLI 81
>pdb|1QJT|A Chain A, Solution Structure Of The Apo Eh1 Domain Of Mouse
Epidermal Growth Factor Receptor Substrate 15, Eps15
Length = 99
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 82 LSSKSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIRE-ADTDG 140
LSS +P E+ RQ+ + G + A + A + K G + + G I + ADTDG
Sbjct: 6 LSSGNPVYEKYYRQV----EAGNTGRVLALDAAAFLKKSG---LPDLILGKIWDLADTDG 58
Query: 141 DGRISFQEFAQAITSAA 157
G +S QEF A+ A
Sbjct: 59 KGVLSKQEFFVALRLVA 75
>pdb|1BOD|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 74
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 23/84 (27%)
Query: 85 KSPYSEEQLRQLFRMFDRDGNGFITAAE-----------LAHSMAKLGHELTAEELTGMI 133
KSP E+L+ +F +D++G+G ++ E L M+ L +
Sbjct: 2 KSP---EELKGIFEKYDKEGDGQLSKEELKLLLQTEFPSLLKGMSTLDE---------LF 49
Query: 134 READTDGDGRISFQEFAQAITSAA 157
E D +GDG +SF+EF + +
Sbjct: 50 EELDKNGDGEVSFEEFQVLVKKIS 73
>pdb|2QAC|A Chain A, The Closed Mtip-myosina-tail Complex From The Malaria
Parasite Invasion Machinery
pdb|4AOM|A Chain A, Mtip And Myoa Complex
Length = 146
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 23/38 (60%)
Query: 91 EQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEE 128
E+L ++F FD + G++T +++ + + G LT +E
Sbjct: 84 EELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQE 121
>pdb|1PON|B Chain B, Site Iii-Site Iv Troponin C Heterodimer, Nmr
Length = 36
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 21/33 (63%)
Query: 124 LTAEELTGMIREADTDGDGRISFQEFAQAITSA 156
+T E++ +++++D + DGRI F EF + +
Sbjct: 2 VTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV 34
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 24/56 (42%)
Query: 96 LFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQ 151
+F +FD+DG+G IT E G + E+ R D D G + E +
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMTR 173
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 24/56 (42%)
Query: 96 LFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQ 151
+F +FD+DG+G IT E G + E+ R D D G + E +
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMTR 173
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 24/56 (42%)
Query: 96 LFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQ 151
+F +FD+DG+G IT E G + E+ R D D G + E +
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMTR 173
>pdb|2KGR|A Chain A, Solution Structure Of Protein Itsn1 From Homo Sapiens.
Northeast Structural Genomics Consortium Target Hr5524a
Length = 111
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 89 SEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQE 148
S + RQLF D+ +G +T + A ++ + L +L + +D D DG+++ +E
Sbjct: 12 SRLKYRQLFNSHDKTMSGHLTGPQ-ARTIL-MQSSLPQAQLASIWNLSDIDQDGKLTAEE 69
Query: 149 FAQAI 153
F A+
Sbjct: 70 FILAM 74
>pdb|2AUC|A Chain A, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
pdb|2AUC|B Chain B, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
pdb|2AUC|C Chain C, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
Length = 126
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 91 EQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFA 150
E+L + F FD + +GF+T + + + G LT +E + + + RI+++ F
Sbjct: 65 EELIKXFSHFDNNSSGFLTKNQXKNILTTWGDALTEQEANDALNAFSS--EDRINYKLFC 122
Query: 151 QAI 153
+ I
Sbjct: 123 EDI 125
>pdb|1NSH|A Chain A, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
pdb|1NSH|B Chain B, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
Length = 101
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 50 PDQLETLIQKADTNSNGLVEFSEFVALVA 78
P L+ +++K D NS+G ++F EF+ L+
Sbjct: 53 PGVLDRMMKKLDLNSDGQLDFQEFLNLIG 81
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 24/56 (42%)
Query: 96 LFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQ 151
+F +FD+DG+G IT E G + E+ R D D G + E +
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDDSGDLDVDEMTR 173
>pdb|2LHL|A Chain A, Chemical Shift Assignments And Solution Structure Of Human
Apo-S100a1 E32q Mutant
pdb|2LHL|B Chain B, Chemical Shift Assignments And Solution Structure Of Human
Apo-S100a1 E32q Mutant
Length = 93
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 18/81 (22%)
Query: 85 KSPYSEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRI 144
K S++QL++L + + +GF+ A + ++ K +++E D +GDG +
Sbjct: 25 KYKLSKKQLKELLQ---TELSGFLDAQKDVDAVDK------------VMKELDENGDGEV 69
Query: 145 SFQEF---AQAITSAAFDNSW 162
FQE+ A+T A + W
Sbjct: 70 DFQEYVVLVAALTVACNNFFW 90
Score = 27.3 bits (59), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 25/40 (62%)
Query: 51 DQLETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSE 90
D ++ ++++ D N +G V+F E+V LVA ++ + + E
Sbjct: 52 DAVDKVMKELDENGDGEVDFQEYVVLVAALTVACNNFFWE 91
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 27.7 bits (60), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 24/56 (42%)
Query: 96 LFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQ 151
+F +FD+DG+G IT E G + E+ R D D G + E +
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTR 173
>pdb|1OZO|A Chain A, Three-Dimensional Solution Structure Of Apo-S100p
Protein Determined By Nmr Spectroscopy
pdb|1OZO|B Chain B, Three-Dimensional Solution Structure Of Apo-S100p
Protein Determined By Nmr Spectroscopy
Length = 95
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 51 DQLETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEE 91
D ++ L++ D N + V+FSEF+ VA + S+ Y E+
Sbjct: 52 DAVDKLLKDLDANGDAQVDFSEFIVFVAA-ITSASHKYFEK 91
>pdb|2L0P|A Chain A, Solution Structure Of Human Apo-S100a1 Protein By Nmr
Spectroscopy
pdb|2L0P|B Chain B, Solution Structure Of Human Apo-S100a1 Protein By Nmr
Spectroscopy
Length = 94
Score = 27.3 bits (59), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 25/40 (62%)
Query: 51 DQLETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSE 90
D ++ ++++ D N +G V+F E+V LVA ++ + + E
Sbjct: 53 DAVDKVMKELDENGDGEVDFQEYVVLVAALTVACNNFFWE 92
Score = 27.3 bits (59), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Query: 132 MIREADTDGDGRISFQEF---AQAITSAAFDNSW 162
+++E D +GDG + FQE+ A+T A + W
Sbjct: 58 VMKELDENGDGEVDFQEYVVLVAALTVACNNFFW 91
>pdb|1J55|A Chain A, The Crystal Structure Of Ca+-Bound Human S100p
Determined At 2.0a Resolution By X-Ray
Length = 95
Score = 27.3 bits (59), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 51 DQLETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEE 91
D ++ L++ D N + V+FSEF+ VA + S+ Y E+
Sbjct: 52 DAVDKLLKDLDANGDAQVDFSEFIVFVAA-ITSACHKYFEK 91
>pdb|2LLU|A Chain A, Post-Translational S-Nitrosylation Is An Endogenous
Factor Fine-Tuning Human S100a1 Protein Properties
pdb|2LLU|B Chain B, Post-Translational S-Nitrosylation Is An Endogenous
Factor Fine-Tuning Human S100a1 Protein Properties
pdb|2LP2|A Chain A, Solution Structure And Dynamics Of Human S100a1 Protein
Modified At Cysteine 85 With Homocysteine Disulfide
Bond Formation In Calcium Saturated Form
pdb|2LP2|B Chain B, Solution Structure And Dynamics Of Human S100a1 Protein
Modified At Cysteine 85 With Homocysteine Disulfide
Bond Formation In Calcium Saturated Form
pdb|2LP3|A Chain A, Solution Structure Of S100a1 Ca2+
pdb|2LP3|B Chain B, Solution Structure Of S100a1 Ca2+
Length = 93
Score = 27.3 bits (59), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 25/40 (62%)
Query: 51 DQLETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSE 90
D ++ ++++ D N +G V+F E+V LVA ++ + + E
Sbjct: 52 DAVDKVMKELDENGDGEVDFQEYVVLVAALTVACNNFFWE 91
Score = 26.9 bits (58), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Query: 132 MIREADTDGDGRISFQEF---AQAITSAAFDNSW 162
+++E D +GDG + FQE+ A+T A + W
Sbjct: 57 VMKELDENGDGEVDFQEYVVLVAALTVACNNFFW 90
>pdb|2LLS|A Chain A, Solution Structure Of Human Apo-S100a1 C85m
pdb|2LLS|B Chain B, Solution Structure Of Human Apo-S100a1 C85m
Length = 93
Score = 27.3 bits (59), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 51 DQLETLIQKADTNSNGLVEFSEFVALVAP 79
D ++ ++++ D N +G V+F E+V LVA
Sbjct: 52 DAVDKVMKELDENGDGEVDFQEYVVLVAA 80
>pdb|2LLT|A Chain A, Post-Translational S-Nitrosylation Is An Endogenous
Factor Fine-Tuning Human S100a1 Protein Properties
pdb|2LLT|B Chain B, Post-Translational S-Nitrosylation Is An Endogenous
Factor Fine-Tuning Human S100a1 Protein Properties
Length = 93
Score = 27.3 bits (59), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 51 DQLETLIQKADTNSNGLVEFSEFVALVAP 79
D ++ ++++ D N +G V+F E+V LVA
Sbjct: 52 DAVDKVMKELDENGDGEVDFQEYVVLVAA 80
>pdb|1MHO|A Chain A, The 2.0 A Structure Of Holo S100b From Bovine Brain
Length = 88
Score = 27.3 bits (59), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 8/50 (16%)
Query: 112 ELAHSMAKLGHELTAEELTGMIREA-DTDGDGRISFQE---FAQAITSAA 157
EL+H + E+ +E+ + E D+DGDG FQE F IT+A
Sbjct: 39 ELSHFLE----EIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMITTAC 84
>pdb|4FQO|A Chain A, Crystal Structure Of Calcium-loaded S100b Bound To Sbi4211
Length = 89
Score = 27.3 bits (59), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 8/50 (16%)
Query: 112 ELAHSMAKLGHELTAEELTGMIREA-DTDGDGRISFQE---FAQAITSAA 157
EL+H + E+ +E+ + E D+DGDG FQE F IT+A
Sbjct: 40 ELSHFLE----EIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMITTAC 85
>pdb|1CFP|A Chain A, S100b (S100beta) Nmr Data Was Collected From A Sample Of
Calcium Free Protein At Ph 6.3 And A Temperature Of 311
K And 1.7-6.9 Mm Concentration, 25 Structures
pdb|1CFP|B Chain B, S100b (S100beta) Nmr Data Was Collected From A Sample Of
Calcium Free Protein At Ph 6.3 And A Temperature Of 311
K And 1.7-6.9 Mm Concentration, 25 Structures
pdb|3CR2|A Chain A, X-ray Structure Of Bovine Zn(2+),ca(2+)-s100b
pdb|3CR5|X Chain X, X-Ray Structure Of Bovine Pnt-Zn(2+),Ca(2+)-S100b
pdb|3CR4|X Chain X, X-Ray Structure Of Bovine Pnt,Ca(2+)-S100b
pdb|3GK1|A Chain A, X-Ray Structure Of Bovine Sbi132,Ca(2+)-S100b
pdb|3GK2|A Chain A, X-Ray Structure Of Bovine Sbi279,Ca(2+)-S100b
pdb|3GK4|X Chain X, X-Ray Structure Of Bovine Sbi523,Ca(2+)-S100b
pdb|3IQO|A Chain A, 1.5 Angstrom X-ray Structure Of Bovine Ca(2+)-s100b
pdb|3IQO|B Chain B, 1.5 Angstrom X-ray Structure Of Bovine Ca(2+)-s100b
pdb|3IQQ|A Chain A, X-Ray Structure Of Bovine Trtk12-Ca(2+)-S100b
pdb|3LLE|A Chain A, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
pdb|3LLE|B Chain B, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
Length = 92
Score = 27.3 bits (59), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 8/50 (16%)
Query: 112 ELAHSMAKLGHELTAEELTGMIREA-DTDGDGRISFQE---FAQAITSAA 157
EL+H + E+ +E+ + E D+DGDG FQE F IT+A
Sbjct: 40 ELSHFLE----EIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMITTAC 85
>pdb|1PSB|A Chain A, Solution Structure Of Calcium Loaded S100b Complexed To A
Peptide From N-Terminal Regulatory Domain Of Ndr Kinase.
pdb|1PSB|B Chain B, Solution Structure Of Calcium Loaded S100b Complexed To A
Peptide From N-Terminal Regulatory Domain Of Ndr Kinase
Length = 91
Score = 27.3 bits (59), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 8/50 (16%)
Query: 112 ELAHSMAKLGHELTAEELTGMIREA-DTDGDGRISFQE---FAQAITSAA 157
EL+H + E+ +E+ + E D+DGDG FQE F IT+A
Sbjct: 39 ELSHFLE----EIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMITTAC 84
>pdb|3LK0|A Chain A, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|B Chain B, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|C Chain C, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|D Chain D, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK1|A Chain A, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
Length = 90
Score = 27.3 bits (59), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 8/50 (16%)
Query: 112 ELAHSMAKLGHELTAEELTGMIREA-DTDGDGRISFQE---FAQAITSAA 157
EL+H + E+ +E+ + E D+DGDG FQE F IT+A
Sbjct: 40 ELSHFLE----EIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMITTAC 85
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 26.9 bits (58), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/109 (21%), Positives = 41/109 (37%), Gaps = 7/109 (6%)
Query: 53 LETLIQKADTNSNGLVEFSEFVALVAPELLSSKSPYSEEQLRQLFRMFDRDGNGFITAAE 112
+ L K DTN NG + E ++A + + + ++ + D + G IT E
Sbjct: 41 INELFYKLDTNHNGSLSHREIYTVLASVGI------KKWDINRILQALDINDRGNITYTE 94
Query: 113 LAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAITSAAFDNS 161
+ + + L + D D DG IS + + DN+
Sbjct: 95 FMAGCYRWK-NIESTFLKAAFNKIDKDEDGYISKSDIVSLVHDKVLDNN 142
>pdb|1FLJ|A Chain A, Crystal Structure Of S-Glutathiolated Carbonic Anhydrase
Iii
Length = 260
Score = 26.9 bits (58), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 10/20 (50%), Positives = 15/20 (75%)
Query: 4 KQPMNLDDDQIAELREIFRS 23
K+PM + DQ+A+LR +F S
Sbjct: 212 KEPMTVSSDQMAKLRSLFAS 231
>pdb|2JJZ|B Chain B, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|C Chain C, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|D Chain D, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2VTG|A Chain A, Crystal Structure Of Human Iba2, Trigonal Crystal Form
Length = 150
Score = 26.9 bits (58), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 23/54 (42%)
Query: 100 FDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAI 153
FD + G I L M KLG T E+ MI E IS+++F +
Sbjct: 59 FDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMM 112
>pdb|1CB1|A Chain A, Three-Dimensional Solution Structure Of Ca2+-Loaded
Porcine Calbindin D9k Determined By Nuclear Magnetic
Resonance Spectroscopy
Length = 78
Score = 26.9 bits (58), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 129 LTGMIREADTDGDGRISFQEF 149
L + +E D +GDG +SF+EF
Sbjct: 49 LDDLFQELDKNGDGEVSFEEF 69
Score = 26.9 bits (58), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 50 PDQLETLIQKADTNSNGLVEFSEFVALV 77
P L+ L Q+ D N +G V F EF LV
Sbjct: 46 PRTLDDLFQELDKNGDGEVSFEEFQVLV 73
>pdb|2JJZ|A Chain A, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
Length = 150
Score = 26.9 bits (58), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 23/54 (42%)
Query: 100 FDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAI 153
FD + G I L M KLG T E+ MI E IS+++F +
Sbjct: 59 FDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMM 112
>pdb|2HQ8|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
pdb|2HQ8|B Chain B, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
Length = 186
Score = 26.9 bits (58), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 11/82 (13%)
Query: 79 PELLSSKSPYSEEQLRQLFRMFDRDGNGFIT-------AAELAHSMAKLGHELTAEELTG 131
PE+ S+ Y +++ + D G+GFI+ A +A +AKL E E
Sbjct: 2 PEITESERAYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAK-IAKLSAEKAEETRQE 60
Query: 132 MIREADTDGDG---RISFQEFA 150
+R AD G RIS +E A
Sbjct: 61 FLRVADQLGLAPGVRISVEEAA 82
Score = 26.2 bits (56), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 14/63 (22%), Positives = 29/63 (46%)
Query: 96 LFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQAITS 155
++ D D +G+++ E + +G +LT ++ D + +G+IS EF +
Sbjct: 107 MYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVND 166
Query: 156 AAF 158
F
Sbjct: 167 FLF 169
>pdb|1QLS|A Chain A, S100c (S100a11),Or Calgizzarin, In Complex With Annexin I
N-Terminus
Length = 99
Score = 26.6 bits (57), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 132 MIREADTDGDGRISFQEFAQAITSAAF 158
M+++ D D DG++ FQEF I A
Sbjct: 61 MMKKLDLDSDGQLDFQEFLNLIGGLAI 87
Score = 26.6 bits (57), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 20/29 (68%)
Query: 50 PDQLETLIQKADTNSNGLVEFSEFVALVA 78
P L+ +++K D +S+G ++F EF+ L+
Sbjct: 55 PGVLDRMMKKLDLDSDGQLDFQEFLNLIG 83
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 26.2 bits (56), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 24/56 (42%)
Query: 96 LFRMFDRDGNGFITAAELAHSMAKLGHELTAEELTGMIREADTDGDGRISFQEFAQ 151
+F +FD+DG+G IT E G + E+ + D D G + E +
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGRISGISPSEEDCEKTFQHCDLDNSGELDVDEMTR 173
>pdb|1MQ1|A Chain A, Ca2+-S100b-Trtk-12 Complex
pdb|1MQ1|B Chain B, Ca2+-S100b-Trtk-12 Complex
pdb|1UWO|A Chain A, Calcium Form Of Human S100b, Nmr, 20 Structures
pdb|1UWO|B Chain B, Calcium Form Of Human S100b, Nmr, 20 Structures
pdb|2PRU|A Chain A, Nmr Structure Of Human Apos100b At 10c
pdb|2PRU|B Chain B, Nmr Structure Of Human Apos100b At 10c
Length = 91
Score = 26.2 bits (56), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 8/50 (16%)
Query: 112 ELAHSMAKLGHELTAEELTGMIREA-DTDGDGRISFQE---FAQAITSAA 157
EL+H + E+ +E+ + E D DGDG FQE F +T+A
Sbjct: 39 ELSHFLE----EIKEQEVVDKVMETLDNDGDGECDFQEFMAFVAMVTTAC 84
>pdb|2H61|C Chain C, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|D Chain D, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|G Chain G, X-ray Structure Of Human Ca2+-loaded S100b
pdb|3D0Y|A Chain A, Crystal Structure Of S100b In The Calcium And Zinc Loaded
State At Ph 6.5
Length = 92
Score = 26.2 bits (56), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 8/50 (16%)
Query: 112 ELAHSMAKLGHELTAEELTGMIREA-DTDGDGRISFQE---FAQAITSAA 157
EL+H + E+ +E+ + E D DGDG FQE F +T+A
Sbjct: 40 ELSHFLE----EIKEQEVVDKVMETLDNDGDGECDFQEFMAFVAMVTTAC 85
>pdb|2H61|A Chain A, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|B Chain B, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|E Chain E, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|F Chain F, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|H Chain H, X-ray Structure Of Human Ca2+-loaded S100b
pdb|3CZT|X Chain X, Crystal Structure Of S100b In The Calcium And Zinc Loaded
State At Ph 9
pdb|3D0Y|B Chain B, Crystal Structure Of S100b In The Calcium And Zinc Loaded
State At Ph 6.5
pdb|3D10|A Chain A, Crystal Structure Of S100b In The Calcium And Zinc Loaded
State At Ph 10.0
pdb|3D10|B Chain B, Crystal Structure Of S100b In The Calcium And Zinc Loaded
State At Ph 10.0
pdb|3HCM|A Chain A, Crystal Structure Of Human S100b In Complex With S45
pdb|3HCM|B Chain B, Crystal Structure Of Human S100b In Complex With S45
Length = 92
Score = 26.2 bits (56), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 8/50 (16%)
Query: 112 ELAHSMAKLGHELTAEELTGMIREA-DTDGDGRISFQE---FAQAITSAA 157
EL+H + E+ +E+ + E D DGDG FQE F +T+A
Sbjct: 40 ELSHFLE----EIKEQEVVDKVMETLDNDGDGECDFQEFMAFVAMVTTAC 85
>pdb|4ICB|A Chain A, Proline Cis-Trans Isomers In Calbindin D9k Observed By
X- Ray Crystallography
Length = 76
Score = 26.2 bits (56), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 49 SPDQLETLIQKADTNSNGLVEFSEFVALV 77
P L+ L ++ D N +G V F EF LV
Sbjct: 43 GPSTLDELFEELDKNGDGEVSFEEFQVLV 71
>pdb|2K7O|A Chain A, Ca2+-s100b, Refined With Rdcs
pdb|2K7O|B Chain B, Ca2+-s100b, Refined With Rdcs
Length = 91
Score = 26.2 bits (56), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 8/50 (16%)
Query: 112 ELAHSMAKLGHELTAEELTGMIREA-DTDGDGRISFQE---FAQAITSAA 157
EL+H + E+ +E+ + E D DGDG FQE F +T+A
Sbjct: 39 ELSHFLE----EIKEQEVVDKVMETLDEDGDGECDFQEFMAFVSMVTTAC 84
>pdb|2WAO|A Chain A, Structure Of A Family Two Carbohydrate Esterase From
Clostridium Thermocellum In Complex With Cellohexaose
Length = 341
Score = 26.2 bits (56), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 121 GHELTAEELTGMIREADTDGDGRISFQEFAQAITSAAFDNSW 162
G +L +T ++ + + GD ++ F EF Q S + W
Sbjct: 268 GLDLCRSYVTEVVNDCNRSGDLKVYFVEFPQQDGSTGYGEDW 309
>pdb|1SYM|A Chain A, 3-D Solution Structure Of Reduced Apo-S100b From Rat, Nmr,
20 Structures
pdb|1SYM|B Chain B, 3-D Solution Structure Of Reduced Apo-S100b From Rat, Nmr,
20 Structures
pdb|1QLK|A Chain A, Solution Structure Of Ca(2+)-Loaded Rat S100b (Betabeta)
Nmr, 20 Structures
pdb|1QLK|B Chain B, Solution Structure Of Ca(2+)-Loaded Rat S100b (Betabeta)
Nmr, 20 Structures
pdb|1B4C|A Chain A, Solution Structure Of Rat Apo-S100b Using Dipolar
Couplings
pdb|1B4C|B Chain B, Solution Structure Of Rat Apo-S100b Using Dipolar
Couplings
pdb|1DT7|A Chain A, Solution Structure Of The C-Terminal Negative Regulatory
Domain Of P53 In A Complex With Ca2+-Bound S100b(Bb)
pdb|1DT7|B Chain B, Solution Structure Of The C-Terminal Negative Regulatory
Domain Of P53 In A Complex With Ca2+-Bound S100b(Bb)
pdb|1MWN|A Chain A, Solution Nmr Structure Of S100b Bound To The High-Affinity
Target Peptide Trtk-12
pdb|1MWN|B Chain B, Solution Nmr Structure Of S100b Bound To The High-Affinity
Target Peptide Trtk-12
pdb|1XYD|A Chain A, Nmr Solution Structure Of Rat Zinc-Calcium-S100b, 20
Structures
pdb|1XYD|B Chain B, Nmr Solution Structure Of Rat Zinc-Calcium-S100b, 20
Structures
Length = 92
Score = 26.2 bits (56), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 8/50 (16%)
Query: 112 ELAHSMAKLGHELTAEELTGMIREA-DTDGDGRISFQE---FAQAITSAA 157
EL+H + E+ +E+ + E D DGDG FQE F +T+A
Sbjct: 40 ELSHFLE----EIKEQEVVDKVMETLDEDGDGECDFQEFMAFVSMVTTAC 85
>pdb|1IG5|A Chain A, Bovine Calbindin D9k Binding Mg2+
pdb|1IGV|A Chain A, Bovine Calbindin D9k Binding Mn2+
pdb|3ICB|A Chain A, The Refined Structure Of Vitamin D-Dependent Calcium-
Binding Protein From Bovine Intestine. Molecular
Details, Ion Binding, And Implications For The
Structure Of Other Calcium-Binding Proteins
Length = 75
Score = 26.2 bits (56), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 49 SPDQLETLIQKADTNSNGLVEFSEFVALV 77
P L+ L ++ D N +G V F EF LV
Sbjct: 42 GPSTLDELFEELDKNGDGEVSFEEFQVLV 70
>pdb|2WAB|A Chain A, Structure Of An Active Site Mutant Of A Family Two
Carbohydrate Esterase From Clostridium Thermocellum In
Complex With Celluohexase
Length = 341
Score = 26.2 bits (56), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 121 GHELTAEELTGMIREADTDGDGRISFQEFAQAITSAAFDNSW 162
G +L +T ++ + + GD ++ F EF Q S + W
Sbjct: 268 GLDLCRSYVTEVVNDCNRSGDLKVYFVEFPQQDGSTGYGEDW 309
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.314 0.130 0.358
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,135,375
Number of Sequences: 62578
Number of extensions: 137677
Number of successful extensions: 1673
Number of sequences better than 100.0: 361
Number of HSP's better than 100.0 without gapping: 311
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 392
Number of HSP's gapped (non-prelim): 708
length of query: 163
length of database: 14,973,337
effective HSP length: 91
effective length of query: 72
effective length of database: 9,278,739
effective search space: 668069208
effective search space used: 668069208
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 47 (22.7 bits)