Query 037793
Match_columns 198
No_of_seqs 147 out of 1956
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 04:26:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037793.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037793hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0158 Cytochrome P450 CYP3/C 100.0 7.8E-51 1.7E-55 338.9 18.8 188 1-192 310-499 (499)
2 PLN02971 tryptophan N-hydroxyl 100.0 4.5E-49 9.7E-54 337.9 20.0 196 1-197 343-539 (543)
3 PLN02394 trans-cinnamate 4-mon 100.0 2E-48 4.3E-53 331.4 20.1 192 1-192 309-502 (503)
4 KOG0156 Cytochrome P450 CYP2 s 100.0 3E-48 6.6E-53 325.9 18.7 187 1-192 302-488 (489)
5 PTZ00404 cytochrome P450; Prov 100.0 9.8E-48 2.1E-52 325.6 18.7 183 1-191 299-482 (482)
6 PLN03234 cytochrome P450 83B1; 100.0 1.8E-47 3.8E-52 325.2 19.5 191 1-191 304-498 (499)
7 PLN00110 flavonoid 3',5'-hydro 100.0 5.9E-47 1.3E-51 322.3 19.9 193 1-193 305-498 (504)
8 PLN02183 ferulate 5-hydroxylas 100.0 7E-47 1.5E-51 322.8 19.6 191 1-193 320-513 (516)
9 KOG0157 Cytochrome P450 CYP4/C 100.0 4.7E-47 1E-51 321.9 18.3 188 1-193 307-497 (497)
10 PLN00168 Cytochrome P450; Prov 100.0 8.9E-47 1.9E-51 322.3 20.1 193 1-193 322-518 (519)
11 KOG0159 Cytochrome P450 CYP11/ 100.0 2.9E-47 6.2E-52 313.1 16.3 186 1-192 332-518 (519)
12 PLN02169 fatty acid (omega-1)- 100.0 8.4E-47 1.8E-51 321.0 19.1 182 1-192 317-500 (500)
13 PLN02738 carotene beta-ring hy 100.0 2.1E-46 4.7E-51 324.9 21.3 193 1-196 407-599 (633)
14 PF00067 p450: Cytochrome P450 100.0 1E-46 2.2E-51 313.8 16.6 184 1-187 278-462 (463)
15 PLN03112 cytochrome P450 famil 100.0 4.6E-46 9.9E-51 317.6 19.9 197 1-197 312-513 (514)
16 PLN02290 cytokinin trans-hydro 100.0 4.6E-46 9.9E-51 317.8 18.9 183 1-192 332-515 (516)
17 PLN02500 cytochrome P450 90B1 100.0 5.2E-46 1.1E-50 315.6 18.9 185 1-190 295-488 (490)
18 PLN02687 flavonoid 3'-monooxyg 100.0 7.5E-46 1.6E-50 316.5 19.8 192 1-192 313-509 (517)
19 PLN02966 cytochrome P450 83A1 100.0 5.7E-46 1.2E-50 316.2 18.9 191 1-195 305-501 (502)
20 PLN02426 cytochrome P450, fami 100.0 1.1E-45 2.4E-50 314.2 19.6 189 1-192 309-500 (502)
21 PLN02655 ent-kaurene oxidase 100.0 1.5E-45 3.3E-50 311.1 19.5 188 1-193 278-465 (466)
22 PLN03195 fatty acid omega-hydr 100.0 9.6E-46 2.1E-50 315.8 18.0 187 1-192 308-516 (516)
23 PLN03018 homomethionine N-hydr 100.0 2.7E-45 5.8E-50 313.7 20.8 193 1-194 330-526 (534)
24 PLN02774 brassinosteroid-6-oxi 100.0 3.7E-45 8E-50 308.5 18.6 180 1-190 280-462 (463)
25 PLN02936 epsilon-ring hydroxyl 100.0 8.8E-45 1.9E-49 308.0 19.5 190 1-193 294-483 (489)
26 PLN03141 3-epi-6-deoxocathaste 100.0 9.3E-45 2E-49 305.2 18.9 181 1-193 267-451 (452)
27 PLN02196 abscisic acid 8'-hydr 100.0 1.4E-43 3.1E-48 298.8 17.7 180 1-191 280-462 (463)
28 PLN02302 ent-kaurenoic acid ox 100.0 2E-43 4.2E-48 299.6 18.3 183 1-193 303-489 (490)
29 PLN02987 Cytochrome P450, fami 100.0 3.2E-43 6.9E-48 297.1 19.5 186 1-194 283-471 (472)
30 KOG0684 Cytochrome P450 [Secon 100.0 5.4E-43 1.2E-47 282.5 15.7 190 1-192 289-485 (486)
31 PLN02648 allene oxide synthase 100.0 5.6E-38 1.2E-42 264.8 16.1 159 2-166 289-463 (480)
32 COG2124 CypX Cytochrome P450 [ 100.0 1.4E-36 3.1E-41 252.5 13.6 159 1-191 252-410 (411)
33 PF05952 ComX: Bacillus compet 61.5 4.7 0.0001 23.9 1.0 25 7-31 4-28 (57)
34 PF08492 SRP72: SRP72 RNA-bind 61.1 6.9 0.00015 23.4 1.7 9 107-115 44-52 (59)
35 PF09201 SRX: SRX; InterPro: 55.7 10 0.00022 26.8 2.1 22 136-157 19-40 (148)
36 PF12508 DUF3714: Protein of u 43.8 22 0.00047 27.0 2.4 44 43-88 51-94 (200)
37 PF11138 DUF2911: Protein of u 39.7 37 0.0008 24.3 2.9 41 68-109 51-98 (145)
38 PF15300 INT_SG_DDX_CT_C: INTS 38.5 27 0.00058 21.3 1.8 15 44-58 40-54 (65)
39 PF08285 DPM3: Dolichol-phosph 32.1 58 0.0012 21.3 2.7 28 3-30 54-81 (91)
40 PRK06789 flagellar motor switc 31.9 54 0.0012 20.5 2.4 40 50-89 21-62 (74)
41 PF13993 YccJ: YccJ-like prote 31.2 81 0.0018 18.9 2.9 26 1-26 14-40 (69)
42 KOG3506 40S ribosomal protein 30.9 23 0.00049 20.7 0.6 11 128-138 12-22 (56)
43 PF07849 DUF1641: Protein of u 30.5 73 0.0016 17.4 2.6 18 6-23 13-30 (42)
44 PF11227 DUF3025: Protein of u 29.8 28 0.00061 26.5 1.1 20 91-110 192-211 (212)
45 COG2101 SPT15 TATA-box binding 28.9 20 0.00043 26.5 0.1 36 104-141 35-70 (185)
46 KOG3302 TATA-box binding prote 28.8 20 0.00044 26.8 0.2 34 104-139 50-83 (200)
47 PF14483 Cut8_M: Cut8 dimerisa 28.7 78 0.0017 16.9 2.4 20 5-24 15-35 (38)
48 cd04518 TBP_archaea archaeal T 25.5 20 0.00043 26.5 -0.4 55 104-161 29-86 (174)
49 cd04516 TBP_eukaryotes eukaryo 24.9 43 0.00094 24.7 1.3 57 104-162 29-87 (174)
50 PF12444 Sox_N: Sox developmen 23.4 54 0.0012 21.1 1.4 19 146-164 61-79 (84)
51 PF14129 DUF4296: Domain of un 23.3 2.1E+02 0.0045 18.2 4.3 31 1-31 49-79 (87)
52 PLN00062 TATA-box-binding prot 21.4 73 0.0016 23.7 1.9 55 104-160 29-85 (179)
53 cd00652 TBP_TLF TATA box bindi 21.0 83 0.0018 23.2 2.2 57 104-162 29-87 (174)
54 TIGR02115 potass_kdpF K+-trans 20.9 23 0.0005 17.4 -0.5 6 106-111 19-24 (26)
55 TIGR03779 Bac_Flav_CT_M Bacter 20.3 83 0.0018 26.7 2.2 20 70-89 279-298 (410)
56 PF02663 FmdE: FmdE, Molybdenu 20.3 98 0.0021 21.4 2.3 22 135-156 5-26 (131)
No 1
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7.8e-51 Score=338.86 Aligned_cols=188 Identities=32% Similarity=0.603 Sum_probs=169.1
Q ss_pred ChhHHHHHHHHHHhCHHHHHHHHHHHhHhhCCCCCCCHhhhccChhHHHHHHHHhcCCCCCCCCCceeecccceec-CeE
Q 037793 1 PLTTLTWAISLLLNNRDALKKAQDELNIHVGANRQVNESDIKNLVYLQAILKETMRLYPAAPLLLPHQSMEDCTIS-GYH 79 (198)
Q Consensus 1 t~~~l~w~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~-g~~ 79 (198)
||+++++++|+||+||++|+||++||+++..+...++++.+.+|+||++||+||||+||+.+.. .|...+|+++. ++.
T Consensus 310 ts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~-~R~C~k~~~i~~~~~ 388 (499)
T KOG0158|consen 310 TASTLSFALYELAKNPDVQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPFL-NRECTKDYEIPGGFV 388 (499)
T ss_pred HHHHHHHHHHHHhcChHHHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCcccc-cceecCceecCCCeE
Confidence 7899999999999999999999999999976655599999999999999999999999999995 79999999999 999
Q ss_pred eCCCCEEEEehhhhhcCCCCCCCCCCCCCCCcCCCCCCcCccCCCCceeccCCCCCCCccHHHHHHHHHHHHHHHhHhce
Q 037793 80 VPAGTQLFVNAWKVHHDPKVWKEPCKFLPERFLTTHKDIDLRGQNFELIPFGSGRRICPGISFAFQVMPLILASLLHGFD 159 (198)
Q Consensus 80 ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~ 159 (198)
|+||+.|.++.+++|+||++||||++|+||||.+++.. ..++.+|+|||.|||+|+|++||++|+|+.|+.||++|+
T Consensus 389 i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~PERF~~~~~~---~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~ 465 (499)
T KOG0158|consen 389 IPKGTPVMIPTYALHHDPEYWPEPEKFKPERFEEENNK---SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFS 465 (499)
T ss_pred eCCCCEEEeecccccCCcccCCCcccCCCccCCCCccc---ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCE
Confidence 99999999999999999999999999999999976632 346789999999999999999999999999999999999
Q ss_pred eecCCCCCCCcc-cccceeeecccCeeEEEEecC
Q 037793 160 LATPLDEPVDME-EAKSLTITRATPLKVLLTPRL 192 (198)
Q Consensus 160 ~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~R~ 192 (198)
++..+.....+. ...+.++.++.++++++++|.
T Consensus 466 ~~~~~~t~~~~~~~~~~~~l~pk~gi~Lkl~~r~ 499 (499)
T KOG0158|consen 466 FEVCPTTIIPLEGDPKGFTLSPKGGIWLKLEPRD 499 (499)
T ss_pred EecCCcccCcccCCccceeeecCCceEEEEEeCC
Confidence 999873222211 223677889999999999984
No 2
>PLN02971 tryptophan N-hydroxylase
Probab=100.00 E-value=4.5e-49 Score=337.94 Aligned_cols=196 Identities=35% Similarity=0.683 Sum_probs=173.8
Q ss_pred ChhHHHHHHHHHHhCHHHHHHHHHHHhHhhCCCCCCCHhhhccChhHHHHHHHHhcCCCCCCCCCceeecccceecCeEe
Q 037793 1 PLTTLTWAISLLLNNRDALKKAQDELNIHVGANRQVNESDIKNLVYLQAILKETMRLYPAAPLLLPHQSMEDCTISGYHV 80 (198)
Q Consensus 1 t~~~l~w~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~~i 80 (198)
|+++++|++++|+.||++|+|+++||+++++.++.++.+++.++||++|||+|+||++|+++...+|.+.+|+.++||.|
T Consensus 343 Ta~tl~~~l~~La~~Pevq~kl~~EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~I 422 (543)
T PLN02971 343 PSNAVEWAMAEMINKPEILHKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHI 422 (543)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEE
Confidence 78899999999999999999999999999987788999999999999999999999999999877899999999999999
Q ss_pred CCCCEEEEehhhhhcCCCCCCCCCCCCCCCcCCCCCCcCccCCCCceeccCCCCCCCccHHHHHHHHHHHHHHHhHhcee
Q 037793 81 PAGTQLFVNAWKVHHDPKVWKEPCKFLPERFLTTHKDIDLRGQNFELIPFGSGRRICPGISFAFQVMPLILASLLHGFDL 160 (198)
Q Consensus 81 p~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~ 160 (198)
|||+.|.++.+++|+||++|+||++|+||||++++........+++|+|||.|+|+|+|++||++|++++++.|+++|+|
T Consensus 423 pkGt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~ 502 (543)
T PLN02971 423 PKGSQVLLSRYGLGRNPKVWSDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKW 502 (543)
T ss_pred CCCCEEEECcHHhcCChhhCCCccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEE
Confidence 99999999999999999999999999999999754221112245789999999999999999999999999999999999
Q ss_pred ecCCCC-CCCcccccceeeecccCeeEEEEecCCCCCC
Q 037793 161 ATPLDE-PVDMEEAKSLTITRATPLKVLLTPRLSASLY 197 (198)
Q Consensus 161 ~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~R~~~~~~ 197 (198)
+++++. ..++....+ ++..+.++.+.+++|..+++|
T Consensus 503 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 539 (543)
T PLN02971 503 KLAGSETRVELMESSH-DMFLSKPLVMVGELRLSEDLY 539 (543)
T ss_pred EeCCCCCCcchhhhcC-cccccccceeeeeecCCcccc
Confidence 988653 455555555 554566999999999887765
No 3
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00 E-value=2e-48 Score=331.35 Aligned_cols=192 Identities=39% Similarity=0.796 Sum_probs=168.3
Q ss_pred ChhHHHHHHHHHHhCHHHHHHHHHHHhHhhCCCCCCCHhhhccChhHHHHHHHHhcCCCCCCCCCceeecccceecCeEe
Q 037793 1 PLTTLTWAISLLLNNRDALKKAQDELNIHVGANRQVNESDIKNLVYLQAILKETMRLYPAAPLLLPHQSMEDCTISGYHV 80 (198)
Q Consensus 1 t~~~l~w~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~~i 80 (198)
||++++|++++|++||++|+||++|++++++.+..++.+++.++||++|||+|+||++|+++...+|.+.+|.+++||.|
T Consensus 309 Ta~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~I 388 (503)
T PLN02394 309 TLWSIEWGIAELVNHPEIQKKLRDELDTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDI 388 (503)
T ss_pred HHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEe
Confidence 78999999999999999999999999999987667889999999999999999999999999987899999999999999
Q ss_pred CCCCEEEEehhhhhcCCCCCCCCCCCCCCCcCCCCCCcCccCCCCceeccCCCCCCCccHHHHHHHHHHHHHHHhHhcee
Q 037793 81 PAGTQLFVNAWKVHHDPKVWKEPCKFLPERFLTTHKDIDLRGQNFELIPFGSGRRICPGISFAFQVMPLILASLLHGFDL 160 (198)
Q Consensus 81 p~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~ 160 (198)
|+||.|.++.+++|+||++|+||++|+||||++++..........+|+|||.|+|+|+|++||++|++++++.++++|++
T Consensus 389 P~Gt~V~~~~~~~~rd~~~~~~P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~ 468 (503)
T PLN02394 389 PAESKILVNAWWLANNPELWKNPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFEL 468 (503)
T ss_pred CCCCEEEEchHHHhCCcccCCCccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHcee
Confidence 99999999999999999999999999999999754221112245689999999999999999999999999999999999
Q ss_pred ecCCCC-CCCcccccc-eeeecccCeeEEEEecC
Q 037793 161 ATPLDE-PVDMEEAKS-LTITRATPLKVLLTPRL 192 (198)
Q Consensus 161 ~~~~~~-~~~~~~~~~-~~~~~~~~~~v~~~~R~ 192 (198)
++.++. ..+.....+ .++..+.++.+.+.||.
T Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 502 (503)
T PLN02394 469 LPPPGQSKIDVSEKGGQFSLHIAKHSTVVFKPRS 502 (503)
T ss_pred EeCCCCCcCccccccCceeeccCCCceEEeecCC
Confidence 987765 344443343 45545669999999996
No 4
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3e-48 Score=325.94 Aligned_cols=187 Identities=52% Similarity=0.912 Sum_probs=171.6
Q ss_pred ChhHHHHHHHHHHhCHHHHHHHHHHHhHhhCCCCCCCHhhhccChhHHHHHHHHhcCCCCCCCCCceeecccceecCeEe
Q 037793 1 PLTTLTWAISLLLNNRDALKKAQDELNIHVGANRQVNESDIKNLVYLQAILKETMRLYPAAPLLLPHQSMEDCTISGYHV 80 (198)
Q Consensus 1 t~~~l~w~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~~i 80 (198)
|++|+.|++.+|+.||++|+|+++||+++++.++.++.+++.++|||+|+|+|++|+||+.|..++|.+.+|+.++||.|
T Consensus 302 ta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~I 381 (489)
T KOG0156|consen 302 TATTLEWAMAELLNNPEVQKKLQEEIDEVVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDI 381 (489)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEc
Confidence 68899999999999999999999999999998888999999999999999999999999999999999999999999999
Q ss_pred CCCCEEEEehhhhhcCCCCCCCCCCCCCCCcCCCCCCcCccCCCCceeccCCCCCCCccHHHHHHHHHHHHHHHhHhcee
Q 037793 81 PAGTQLFVNAWKVHHDPKVWKEPCKFLPERFLTTHKDIDLRGQNFELIPFGSGRRICPGISFAFQVMPLILASLLHGFDL 160 (198)
Q Consensus 81 p~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~ 160 (198)
||||.|+++.|++|+||++|+||++|+||||++++ + .+.....++|||.|+|+|||..+|++++.++++.|+++|+|
T Consensus 382 PkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~~~-d--~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w 458 (489)
T KOG0156|consen 382 PKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLDSN-D--GKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDW 458 (489)
T ss_pred CCCCEEEEeehhhhcCCccCCCccccChhhhcCCc-c--ccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeee
Confidence 99999999999999999999999999999999874 1 12356789999999999999999999999999999999999
Q ss_pred ecCCCCCCCcccccceeeecccCeeEEEEecC
Q 037793 161 ATPLDEPVDMEEAKSLTITRATPLKVLLTPRL 192 (198)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~ 192 (198)
+.+++ .+++... +.++..+.++.+...+|.
T Consensus 459 ~~~~~-~~d~~e~-~~~~~~~~pl~~~~~~r~ 488 (489)
T KOG0156|consen 459 KLPGG-KVDMEEA-GLTLKKKKPLKAVPVPRL 488 (489)
T ss_pred ecCCC-CCCCccc-ccceecCCcceeeeecCC
Confidence 99987 6667655 466667778888877775
No 5
>PTZ00404 cytochrome P450; Provisional
Probab=100.00 E-value=9.8e-48 Score=325.58 Aligned_cols=183 Identities=31% Similarity=0.527 Sum_probs=163.6
Q ss_pred ChhHHHHHHHHHHhCHHHHHHHHHHHhHhhCCCCCCCHhhhccChhHHHHHHHHhcCCCCCCCCCceeeccccee-cCeE
Q 037793 1 PLTTLTWAISLLLNNRDALKKAQDELNIHVGANRQVNESDIKNLVYLQAILKETMRLYPAAPLLLPHQSMEDCTI-SGYH 79 (198)
Q Consensus 1 t~~~l~w~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~-~g~~ 79 (198)
|+++++|++++|++||++|+||++|++++++....++.+++.+|||++|||+|+||++|+++...+|.+.+|+++ +|+.
T Consensus 299 ta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~ 378 (482)
T PTZ00404 299 SATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHF 378 (482)
T ss_pred HHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeE
Confidence 789999999999999999999999999999876678899999999999999999999999997668999999999 9999
Q ss_pred eCCCCEEEEehhhhhcCCCCCCCCCCCCCCCcCCCCCCcCccCCCCceeccCCCCCCCccHHHHHHHHHHHHHHHhHhce
Q 037793 80 VPAGTQLFVNAWKVHHDPKVWKEPCKFLPERFLTTHKDIDLRGQNFELIPFGSGRRICPGISFAFQVMPLILASLLHGFD 159 (198)
Q Consensus 80 ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~ 159 (198)
||||+.|.++.+++|+||++|+||++|+||||++.. .+..|+|||+|+|+|+|++||++|++++++.++++|+
T Consensus 379 Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl~~~-------~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~ 451 (482)
T PTZ00404 379 IPKDAQILINYYSLGRNEKYFENPEQFDPSRFLNPD-------SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFK 451 (482)
T ss_pred ECCCCEEEeeHHHhhCCccccCCccccCccccCCCC-------CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcE
Confidence 999999999999999999999999999999998642 3468999999999999999999999999999999999
Q ss_pred eecCCCCCCCcccccceeeecccCeeEEEEec
Q 037793 160 LATPLDEPVDMEEAKSLTITRATPLKVLLTPR 191 (198)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R 191 (198)
++.+++++.......+.+.. +.++++.+++|
T Consensus 452 ~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~R 482 (482)
T PTZ00404 452 LKSIDGKKIDETEEYGLTLK-PNKFKVLLEKR 482 (482)
T ss_pred EecCCCCCCCcccccceeec-CCCceeeeecC
Confidence 99876654333333455555 56789998887
No 6
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00 E-value=1.8e-47 Score=325.25 Aligned_cols=191 Identities=39% Similarity=0.771 Sum_probs=167.7
Q ss_pred ChhHHHHHHHHHHhCHHHHHHHHHHHhHhhCCCCCCCHhhhccChhHHHHHHHHhcCCCCCCCCCceeecccceecCeEe
Q 037793 1 PLTTLTWAISLLLNNRDALKKAQDELNIHVGANRQVNESDIKNLVYLQAILKETMRLYPAAPLLLPHQSMEDCTISGYHV 80 (198)
Q Consensus 1 t~~~l~w~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~~i 80 (198)
||++++|++++|++||++|+|+++|+++++++.+.++++++.++||++|||+|++|++|+++...+|.+.+|.+++|+.|
T Consensus 304 Ta~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~I 383 (499)
T PLN03234 304 AAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDI 383 (499)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEE
Confidence 78999999999999999999999999999987777899999999999999999999999999876799999999999999
Q ss_pred CCCCEEEEehhhhhcCCCCC-CCCCCCCCCCcCCCCCCcCccCCCCceeccCCCCCCCccHHHHHHHHHHHHHHHhHhce
Q 037793 81 PAGTQLFVNAWKVHHDPKVW-KEPCKFLPERFLTTHKDIDLRGQNFELIPFGSGRRICPGISFAFQVMPLILASLLHGFD 159 (198)
Q Consensus 81 p~g~~v~~~~~~~~~d~~~~-~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~ 159 (198)
||||.|.++.+.+||||++| +||++||||||+++.........+..|+|||.|+|+|+|+++|++|++++++.|+++|+
T Consensus 384 P~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~ 463 (499)
T PLN03234 384 PAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFD 463 (499)
T ss_pred CCCCEEEEehHhhhCCcccccCChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHhee
Confidence 99999999999999999999 89999999999975432222334678999999999999999999999999999999999
Q ss_pred eecCCCC---CCCcccccceeeecccCeeEEEEec
Q 037793 160 LATPLDE---PVDMEEAKSLTITRATPLKVLLTPR 191 (198)
Q Consensus 160 ~~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~R 191 (198)
++++++. ........+++..++..+.+..++|
T Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (499)
T PLN03234 464 WSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAPTKH 498 (499)
T ss_pred eeCCCCCCCCCCCcccccccccccCCCeEEEeecC
Confidence 9998762 2333345577777777777777765
No 7
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00 E-value=5.9e-47 Score=322.27 Aligned_cols=193 Identities=42% Similarity=0.822 Sum_probs=170.2
Q ss_pred ChhHHHHHHHHHHhCHHHHHHHHHHHhHhhCCCCCCCHhhhccChhHHHHHHHHhcCCCCCCCCCceeecccceecCeEe
Q 037793 1 PLTTLTWAISLLLNNRDALKKAQDELNIHVGANRQVNESDIKNLVYLQAILKETMRLYPAAPLLLPHQSMEDCTISGYHV 80 (198)
Q Consensus 1 t~~~l~w~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~~i 80 (198)
|+++++|++++|++||++|+|+++|++++++.+..++.+++.++||+++||+|+||++|+++..++|.+.+|++++||.|
T Consensus 305 ta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~I 384 (504)
T PLN00110 305 SSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYI 384 (504)
T ss_pred hHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEE
Confidence 78899999999999999999999999999887777899999999999999999999999999866899999999999999
Q ss_pred CCCCEEEEehhhhhcCCCCCCCCCCCCCCCcCCCCCCc-CccCCCCceeccCCCCCCCccHHHHHHHHHHHHHHHhHhce
Q 037793 81 PAGTQLFVNAWKVHHDPKVWKEPCKFLPERFLTTHKDI-DLRGQNFELIPFGSGRRICPGISFAFQVMPLILASLLHGFD 159 (198)
Q Consensus 81 p~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~-~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~ 159 (198)
|||+.|.++.+++|+||++|+||++|+||||+++.... ......+.|+|||.|+|.|+|++||++|++++++.|+++|+
T Consensus 385 p~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~ 464 (504)
T PLN00110 385 PKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFD 464 (504)
T ss_pred CCCCEEEEeHHHhcCChhhcCCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhce
Confidence 99999999999999999999999999999999653211 11112357999999999999999999999999999999999
Q ss_pred eecCCCCCCCcccccceeeecccCeeEEEEecCC
Q 037793 160 LATPLDEPVDMEEAKSLTITRATPLKVLLTPRLS 193 (198)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~ 193 (198)
+++.++.+.......+.++.++.++.+.+++|..
T Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 498 (504)
T PLN00110 465 WKLPDGVELNMDEAFGLALQKAVPLSAMVTPRLH 498 (504)
T ss_pred eecCCCCccCcccccccccccCCCceEeeccCCC
Confidence 9988765444333456777788899999999963
No 8
>PLN02183 ferulate 5-hydroxylase
Probab=100.00 E-value=7e-47 Score=322.76 Aligned_cols=191 Identities=41% Similarity=0.764 Sum_probs=166.4
Q ss_pred ChhHHHHHHHHHHhCHHHHHHHHHHHhHhhCCCCCCCHhhhccChhHHHHHHHHhcCCCCCCCCCceeecccceecCeEe
Q 037793 1 PLTTLTWAISLLLNNRDALKKAQDELNIHVGANRQVNESDIKNLVYLQAILKETMRLYPAAPLLLPHQSMEDCTISGYHV 80 (198)
Q Consensus 1 t~~~l~w~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~~i 80 (198)
|+++++|++++|++||++|+|+++|++++++..+.++.+++.+++|++|||+|+||++|+++.. .|.+.+|++++|+.|
T Consensus 320 Ta~tl~~~l~~La~~Pevq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~-~r~~~~d~~l~g~~I 398 (516)
T PLN02183 320 VASAIEWAMAELMKSPEDLKRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLL-LHETAEDAEVAGYFI 398 (516)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccce-eeeccCceeECCEEE
Confidence 7899999999999999999999999999988666789999999999999999999999999987 589999999999999
Q ss_pred CCCCEEEEehhhhhcCCCCCCCCCCCCCCCcCCCCCCcCccCCCCceeccCCCCCCCccHHHHHHHHHHHHHHHhHhcee
Q 037793 81 PAGTQLFVNAWKVHHDPKVWKEPCKFLPERFLTTHKDIDLRGQNFELIPFGSGRRICPGISFAFQVMPLILASLLHGFDL 160 (198)
Q Consensus 81 p~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~ 160 (198)
|||+.|.++.+++|+||++|+||++|+||||++++.. .....++.|+|||.|+|+|+|++||++|+++++|.|+++|++
T Consensus 399 PkGt~V~~~~~~~hrd~~~~~dP~~F~PeRfl~~~~~-~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~ 477 (516)
T PLN02183 399 PKRSRVMINAWAIGRDKNSWEDPDTFKPSRFLKPGVP-DFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTW 477 (516)
T ss_pred CCCCEEEEehhhhcCCccccCCccccCchhhCCCCCc-cccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEE
Confidence 9999999999999999999999999999999965421 112245689999999999999999999999999999999999
Q ss_pred ecCCCCC---CCcccccceeeecccCeeEEEEecCC
Q 037793 161 ATPLDEP---VDMEEAKSLTITRATPLKVLLTPRLS 193 (198)
Q Consensus 161 ~~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~R~~ 193 (198)
+..++.. .......+.+.++..++.+.+++|.-
T Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 513 (516)
T PLN02183 478 ELPDGMKPSELDMNDVFGLTAPRATRLVAVPTYRLQ 513 (516)
T ss_pred EcCCCCCCCCCChhhccccccccCCCcEEEeecCCC
Confidence 9877642 22223335555566688899998853
No 9
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00 E-value=4.7e-47 Score=321.87 Aligned_cols=188 Identities=32% Similarity=0.655 Sum_probs=165.5
Q ss_pred ChhHHHHHHHHHHhCHHHHHHHHHHHhHhhCCCCC-CCHhhhccChhHHHHHHHHhcCCCCCCCCCceeecccceec-Ce
Q 037793 1 PLTTLTWAISLLLNNRDALKKAQDELNIHVGANRQ-VNESDIKNLVYLQAILKETMRLYPAAPLLLPHQSMEDCTIS-GY 78 (198)
Q Consensus 1 t~~~l~w~l~~l~~~p~~~~~l~~Ei~~~~~~~~~-~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~-g~ 78 (198)
||++++|+++.|+.||++|+|+++|++++++.+.. .+.....+|+|+++||+|+|||||++|.. .|.+.+|..++ ||
T Consensus 307 Tss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~-~R~~~~d~~l~~g~ 385 (497)
T KOG0157|consen 307 TSSALTWTLWLLAKHPEVQEKLREEVDEILGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPLV-ARKATKDVKLPGGY 385 (497)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCCCChhhhhhhHHHHHHHHHHhccCCCCchh-hcccCCCeEcCCCc
Confidence 78999999999999999999999999999975433 23333346999999999999999999988 69999999995 89
Q ss_pred EeCCCCEEEEehhhhhcCCCCCC-CCCCCCCCCcCCCCCCcCccCCCCceeccCCCCCCCccHHHHHHHHHHHHHHHhHh
Q 037793 79 HVPAGTQLFVNAWKVHHDPKVWK-EPCKFLPERFLTTHKDIDLRGQNFELIPFGSGRRICPGISFAFQVMPLILASLLHG 157 (198)
Q Consensus 79 ~ip~g~~v~~~~~~~~~d~~~~~-~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~ 157 (198)
.||||+.|.++.+++|||+.+|+ ||++||||||+++.... ..++++|+|||+|+|+|+|++||++|++++++.++++
T Consensus 386 ~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~~~~~~--~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~ 463 (497)
T KOG0157|consen 386 TIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLDGEEKA--KRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRR 463 (497)
T ss_pred EeCCCCEEEEehHHhccCccccCCChhhcCccccCCCCCcC--CCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999996 99999999999754322 3357899999999999999999999999999999999
Q ss_pred ceeecCCCCCCCcccccceeeecccCeeEEEEecCC
Q 037793 158 FDLATPLDEPVDMEEAKSLTITRATPLKVLLTPRLS 193 (198)
Q Consensus 158 f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~ 193 (198)
|+|++..+.. .......++.++.+++|++++|.+
T Consensus 464 f~~~~~~~~~--~~~~~~~~l~~~~gl~v~~~~r~~ 497 (497)
T KOG0157|consen 464 FRIEPVGGDK--PKPVPELTLRPKNGLKVKLRPRGS 497 (497)
T ss_pred eEEEecCCCC--ceeeeEEEEEecCCeEEEEEeCCC
Confidence 9999887643 445567888999999999999964
No 10
>PLN00168 Cytochrome P450; Provisional
Probab=100.00 E-value=8.9e-47 Score=322.32 Aligned_cols=193 Identities=31% Similarity=0.634 Sum_probs=167.7
Q ss_pred ChhHHHHHHHHHHhCHHHHHHHHHHHhHhhCCC-CCCCHhhhccChhHHHHHHHHhcCCCCCCCCCceeecccceecCeE
Q 037793 1 PLTTLTWAISLLLNNRDALKKAQDELNIHVGAN-RQVNESDIKNLVYLQAILKETMRLYPAAPLLLPHQSMEDCTISGYH 79 (198)
Q Consensus 1 t~~~l~w~l~~l~~~p~~~~~l~~Ei~~~~~~~-~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~~ 79 (198)
|+++++|++++|++||++|+|+++|++++++.. ..++.+++.+|||+++||+|++|++|+++..++|.+.+|++++||.
T Consensus 322 Ta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~ 401 (519)
T PLN00168 322 TSTALQWIMAELVKNPSIQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYL 401 (519)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEE
Confidence 688999999999999999999999999998753 5689999999999999999999999999887789999999999999
Q ss_pred eCCCCEEEEehhhhhcCCCCCCCCCCCCCCCcCCCCCCc--C-ccCCCCceeccCCCCCCCccHHHHHHHHHHHHHHHhH
Q 037793 80 VPAGTQLFVNAWKVHHDPKVWKEPCKFLPERFLTTHKDI--D-LRGQNFELIPFGSGRRICPGISFAFQVMPLILASLLH 156 (198)
Q Consensus 80 ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~--~-~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~ 156 (198)
||||+.|.++.+++|+||++|+||++|+||||++..... . ....++.|+|||.|+|+|+|++||++|++++++.|++
T Consensus 402 IpkGt~v~~~~~~~~~d~~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~ 481 (519)
T PLN00168 402 IPKGATVNFMVAEMGRDEREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVR 481 (519)
T ss_pred ECCCCEEEEChHHHhcCccccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999743210 0 1123468999999999999999999999999999999
Q ss_pred hceeecCCCCCCCcccccceeeecccCeeEEEEecCC
Q 037793 157 GFDLATPLDEPVDMEEAKSLTITRATPLKVLLTPRLS 193 (198)
Q Consensus 157 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~ 193 (198)
+|+|++.++...+.....+++..++.++++.+++|+.
T Consensus 482 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~ 518 (519)
T PLN00168 482 EFEWKEVPGDEVDFAEKREFTTVMAKPLRARLVPRRT 518 (519)
T ss_pred HccceeCCCCcCChhhhceeEEeecCCcEEEEEeccC
Confidence 9999987654444433334556667789999999874
No 11
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.9e-47 Score=313.06 Aligned_cols=186 Identities=32% Similarity=0.550 Sum_probs=171.9
Q ss_pred ChhHHHHHHHHHHhCHHHHHHHHHHHhHhhCC-CCCCCHhhhccChhHHHHHHHHhcCCCCCCCCCceeecccceecCeE
Q 037793 1 PLTTLTWAISLLLNNRDALKKAQDELNIHVGA-NRQVNESDIKNLVYLQAILKETMRLYPAAPLLLPHQSMEDCTISGYH 79 (198)
Q Consensus 1 t~~~l~w~l~~l~~~p~~~~~l~~Ei~~~~~~-~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~~ 79 (198)
||+++.|+||+|++||++|++|++|+.++++. +..++.+.+.++|||+|||+|++||||.+++. .|+..+|.+++||.
T Consensus 332 Ts~tl~~~Ly~LarnP~~Q~~L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~-~R~l~~D~vL~gY~ 410 (519)
T KOG0159|consen 332 TSNTLLWALYELARNPEVQQRLREEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGN-GRVLPKDLVLSGYH 410 (519)
T ss_pred hHHHHHHHHHHHhcChHHHHHHHHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceecccccc-ccccchhceeccce
Confidence 79999999999999999999999999999988 67899999999999999999999999999998 69999999999999
Q ss_pred eCCCCEEEEehhhhhcCCCCCCCCCCCCCCCcCCCCCCcCccCCCCceeccCCCCCCCccHHHHHHHHHHHHHHHhHhce
Q 037793 80 VPAGTQLFVNAWKVHHDPKVWKEPCKFLPERFLTTHKDIDLRGQNFELIPFGSGRRICPGISFAFQVMPLILASLLHGFD 159 (198)
Q Consensus 80 ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~ 159 (198)
|||||.|.+..+...+||++|++|.+|+||||+++.. ...+++.++|||.|+|+|+|++||.+|+.++++.++++|+
T Consensus 411 vPagT~V~l~~~~~~r~~~~F~~p~~F~PeRWL~~~~---~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~ 487 (519)
T KOG0159|consen 411 VPAGTLVVLFLYVLGRNPAYFPDPEEFLPERWLKPST---KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFK 487 (519)
T ss_pred ecCCCeEEEeehhhccChhhCCCccccChhhhccccc---CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999998762 2447899999999999999999999999999999999999
Q ss_pred eecCCCCCCCcccccceeeecccCeeEEEEecC
Q 037793 160 LATPLDEPVDMEEAKSLTITRATPLKVLLTPRL 192 (198)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~ 192 (198)
++...+. ++.....+++.|..++.+++++|+
T Consensus 488 V~~~~~~--pv~~~~~~il~P~~~l~f~f~~r~ 518 (519)
T KOG0159|consen 488 VEFLHEE--PVEYVYRFILVPNRPLRFKFRPRN 518 (519)
T ss_pred eeecCCC--CccceeEEEEcCCCCcceeeeeCC
Confidence 9988754 444456677789999999999986
No 12
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00 E-value=8.4e-47 Score=321.02 Aligned_cols=182 Identities=26% Similarity=0.508 Sum_probs=157.4
Q ss_pred ChhHHHHHHHHHHhCHHHHHHHHHHHhHhhCCCCCCCHhhhccChhHHHHHHHHhcCCCCCCCCCceeeccc-ceecCeE
Q 037793 1 PLTTLTWAISLLLNNRDALKKAQDELNIHVGANRQVNESDIKNLVYLQAILKETMRLYPAAPLLLPHQSMED-CTISGYH 79 (198)
Q Consensus 1 t~~~l~w~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~d-~~~~g~~ 79 (198)
|+++++|++++|+.||++|+|+++|+++++ +.+++.++|||+||++|+||++|+++... |.+.+| ..++|+.
T Consensus 317 Ta~tl~w~l~~La~~Pevq~kl~~Ei~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~-r~~~~d~~~~~G~~ 389 (500)
T PLN02169 317 TSSALTWFFWLLSKHPQVMAKIRHEINTKF------DNEDLEKLVYLHAALSESMRLYPPLPFNH-KAPAKPDVLPSGHK 389 (500)
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCcCc-eecCCCCCccCCEE
Confidence 789999999999999999999999998764 57899999999999999999999999885 555555 4458999
Q ss_pred eCCCCEEEEehhhhhcCCCCC-CCCCCCCCCCcCCCCCCcCccCCCCceeccCCCCCCCccHHHHHHHHHHHHHHHhHhc
Q 037793 80 VPAGTQLFVNAWKVHHDPKVW-KEPCKFLPERFLTTHKDIDLRGQNFELIPFGSGRRICPGISFAFQVMPLILASLLHGF 158 (198)
Q Consensus 80 ip~g~~v~~~~~~~~~d~~~~-~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f 158 (198)
||||+.|.++.+++||||++| +||++|+||||+++++.. ....+++|+|||+|+|+|+|++||++|++++++.|+++|
T Consensus 390 IpkGt~v~i~~~~ihrd~~~w~~dP~~F~PeRfl~~~~~~-~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f 468 (500)
T PLN02169 390 VDAESKIVICIYALGRMRSVWGEDALDFKPERWISDNGGL-RHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNY 468 (500)
T ss_pred ECCCCEEEEcHHHhhCCccccCCChhhcCccccCCCCCCc-cCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHC
Confidence 999999999999999999999 899999999999754321 112367899999999999999999999999999999999
Q ss_pred eeecCCCCCCCcccccceeeecccCeeEEEEecC
Q 037793 159 DLATPLDEPVDMEEAKSLTITRATPLKVLLTPRL 192 (198)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~ 192 (198)
+++.+++... ....+.++.++.++++++++|.
T Consensus 469 ~~~~~~~~~~--~~~~~~~l~~~~gl~l~l~~~~ 500 (500)
T PLN02169 469 DFKVIEGHKI--EAIPSILLRMKHGLKVTVTKKI 500 (500)
T ss_pred EEEEcCCCCc--ccccceEEecCCCEEEEEEeCC
Confidence 9998765433 3344567788999999999873
No 13
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00 E-value=2.1e-46 Score=324.86 Aligned_cols=193 Identities=31% Similarity=0.576 Sum_probs=167.5
Q ss_pred ChhHHHHHHHHHHhCHHHHHHHHHHHhHhhCCCCCCCHhhhccChhHHHHHHHHhcCCCCCCCCCceeecccceecCeEe
Q 037793 1 PLTTLTWAISLLLNNRDALKKAQDELNIHVGANRQVNESDIKNLVYLQAILKETMRLYPAAPLLLPHQSMEDCTISGYHV 80 (198)
Q Consensus 1 t~~~l~w~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~~i 80 (198)
||++++|++++|++||++|+||++|++++++. ..++++++.+||||+|||+|+||++|+++.. .|.+.+|.+++||.|
T Consensus 407 TA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~-~~~t~edL~kLPYL~AVIkEtLRL~p~~p~~-~R~a~~d~~i~gy~I 484 (633)
T PLN02738 407 SAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD-RFPTIEDMKKLKYTTRVINESLRLYPQPPVL-IRRSLENDMLGGYPI 484 (633)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC-CCCCHHHHccCHHHHHHHHHHHhcCCCcccc-ceeeccCceECCEEE
Confidence 78999999999999999999999999999874 6689999999999999999999999999986 588899999999999
Q ss_pred CCCCEEEEehhhhhcCCCCCCCCCCCCCCCcCCCCCCcCccCCCCceeccCCCCCCCccHHHHHHHHHHHHHHHhHhcee
Q 037793 81 PAGTQLFVNAWKVHHDPKVWKEPCKFLPERFLTTHKDIDLRGQNFELIPFGSGRRICPGISFAFQVMPLILASLLHGFDL 160 (198)
Q Consensus 81 p~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~ 160 (198)
||||.|.++.+.+|+||++|+||++|+||||+............+.|+|||.|+|+|+|++||++|++++++.|+++|+|
T Consensus 485 PkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~ 564 (633)
T PLN02738 485 KRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDF 564 (633)
T ss_pred CCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCee
Confidence 99999999999999999999999999999998532111112245689999999999999999999999999999999999
Q ss_pred ecCCCCCCCcccccceeeecccCeeEEEEecCCCCC
Q 037793 161 ATPLDEPVDMEEAKSLTITRATPLKVLLTPRLSASL 196 (198)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~~~~ 196 (198)
++..+.. +.....+.++.+..++++.+++|.++..
T Consensus 565 el~~~~~-~~~~~~~~~~~p~~~l~v~l~~R~~~~~ 599 (633)
T PLN02738 565 QLAPGAP-PVKMTTGATIHTTEGLKMTVTRRTKPPV 599 (633)
T ss_pred EeCCCCC-CcccccceEEeeCCCcEEEEEECCCCCC
Confidence 9886542 2333335666678899999999976543
No 14
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00 E-value=1e-46 Score=313.82 Aligned_cols=184 Identities=35% Similarity=0.692 Sum_probs=157.3
Q ss_pred ChhHHHHHHHHHHhCHHHHHHHHHHHhHhhCCCCCCCHhhhccChhHHHHHHHHhcCCCCCCCCCceeecccceecCeEe
Q 037793 1 PLTTLTWAISLLLNNRDALKKAQDELNIHVGANRQVNESDIKNLVYLQAILKETMRLYPAAPLLLPHQSMEDCTISGYHV 80 (198)
Q Consensus 1 t~~~l~w~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~~i 80 (198)
|+.+++|++++|++||++|+||++|++++.+....++.+++.++|||+|||+|++|++|+++..++|.+.+|++++|+.|
T Consensus 278 t~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~i 357 (463)
T PF00067_consen 278 TASTLSWTLYELAKNPEVQEKLREEIDSVLGDGREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFI 357 (463)
T ss_dssp HHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTSSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 68899999999999999999999999999976677899999999999999999999999999666899999999999999
Q ss_pred CCCCEEEEehhhhhcCCCCCCCCCCCCCCCcCCCCCCcCccCCCCceeccCCCCCCCccHHHHHHHHHHHHHHHhHhcee
Q 037793 81 PAGTQLFVNAWKVHHDPKVWKEPCKFLPERFLTTHKDIDLRGQNFELIPFGSGRRICPGISFAFQVMPLILASLLHGFDL 160 (198)
Q Consensus 81 p~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~ 160 (198)
|||+.|.++.+++|+||++|+||++|+|+||++.+. ........|+|||.|+|.|+|++||++|++++++.|+++|+|
T Consensus 358 p~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~--~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~ 435 (463)
T PF00067_consen 358 PKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDERG--ISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDF 435 (463)
T ss_dssp ETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTTTS--TBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEE
T ss_pred cccccccccccccccccccccccccccccccccccc--ccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEE
Confidence 999999999999999999999999999999998764 112356789999999999999999999999999999999999
Q ss_pred ecCCCCCCCccccc-ceeeecccCeeEE
Q 037793 161 ATPLDEPVDMEEAK-SLTITRATPLKVL 187 (198)
Q Consensus 161 ~~~~~~~~~~~~~~-~~~~~~~~~~~v~ 187 (198)
++.++......... +++. ++.+..|.
T Consensus 436 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 462 (463)
T PF00067_consen 436 ELVPGSEPEPQEQQNGFLL-PPKPLKVK 462 (463)
T ss_dssp EESTTSSGGEEECSCSSSE-EESSSEEE
T ss_pred EECCCCCCCCccccCceEe-eCCCcEEe
Confidence 99765443333222 3333 44455554
No 15
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00 E-value=4.6e-46 Score=317.63 Aligned_cols=197 Identities=37% Similarity=0.735 Sum_probs=170.5
Q ss_pred ChhHHHHHHHHHHhCHHHHHHHHHHHhHhhCCCCCCCHhhhccChhHHHHHHHHhcCCCCCCCCCceeecccceecCeEe
Q 037793 1 PLTTLTWAISLLLNNRDALKKAQDELNIHVGANRQVNESDIKNLVYLQAILKETMRLYPAAPLLLPHQSMEDCTISGYHV 80 (198)
Q Consensus 1 t~~~l~w~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~~i 80 (198)
||++++|++++|++||++|+||++|++++++.++.++.+++.++||++|+|+|++|++|+++...+|.+.+|..++|+.|
T Consensus 312 Ta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~I 391 (514)
T PLN03112 312 SAVTNEWAMAEVIKNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYI 391 (514)
T ss_pred HHHHHHHHHHHHHhChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEe
Confidence 78899999999999999999999999999887777899999999999999999999999999866899999999999999
Q ss_pred CCCCEEEEehhhhhcCCCCCCCCCCCCCCCcCCCCCCc-C-ccCCCCceeccCCCCCCCccHHHHHHHHHHHHHHHhHhc
Q 037793 81 PAGTQLFVNAWKVHHDPKVWKEPCKFLPERFLTTHKDI-D-LRGQNFELIPFGSGRRICPGISFAFQVMPLILASLLHGF 158 (198)
Q Consensus 81 p~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~-~-~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f 158 (198)
|||+.|.++.+.+|+||++|+||++||||||....+.. . ....++.|+|||.|+|+|+|++||++|++++++.++++|
T Consensus 392 PkGt~v~~~~~~~h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f 471 (514)
T PLN03112 392 PAKTRVFINTHGLGRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCF 471 (514)
T ss_pred CCCCEEEEehHHhhCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhe
Confidence 99999999999999999999999999999987543211 1 112346899999999999999999999999999999999
Q ss_pred eeecCCCC---CCCcccccceeeecccCeeEEEEecCCCCCC
Q 037793 159 DLATPLDE---PVDMEEAKSLTITRATPLKVLLTPRLSASLY 197 (198)
Q Consensus 159 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~R~~~~~~ 197 (198)
+|++.++. ++......++++++..++++.+.+|..-.+|
T Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 513 (514)
T PLN03112 472 DWSPPDGLRPEDIDTQEVYGMTMPKAKPLRAVATPRLAPHLY 513 (514)
T ss_pred eeecCCCCCcccCCCccccCcccccCCCeEEEeecCCccccc
Confidence 99987553 2333334466667788999999999654443
No 16
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00 E-value=4.6e-46 Score=317.76 Aligned_cols=183 Identities=29% Similarity=0.526 Sum_probs=163.3
Q ss_pred ChhHHHHHHHHHHhCHHHHHHHHHHHhHhhCCCCCCCHhhhccChhHHHHHHHHhcCCCCCCCCCceeecccceecCeEe
Q 037793 1 PLTTLTWAISLLLNNRDALKKAQDELNIHVGANRQVNESDIKNLVYLQAILKETMRLYPAAPLLLPHQSMEDCTISGYHV 80 (198)
Q Consensus 1 t~~~l~w~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~~i 80 (198)
|+++++|++++|++||++|+|+++|++++++.+ .++.+++.++||++|||+|+||++|+++.. +|.+.+|++++|+.|
T Consensus 332 ta~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~~-~R~~~~d~~i~g~~I 409 (516)
T PLN02290 332 TALLLTWTLMLLASNPTWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATLL-PRMAFEDIKLGDLHI 409 (516)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCcccc-ceeecCCeeECCEEE
Confidence 688999999999999999999999999998764 789999999999999999999999999865 899999999999999
Q ss_pred CCCCEEEEehhhhhcCCCCC-CCCCCCCCCCcCCCCCCcCccCCCCceeccCCCCCCCccHHHHHHHHHHHHHHHhHhce
Q 037793 81 PAGTQLFVNAWKVHHDPKVW-KEPCKFLPERFLTTHKDIDLRGQNFELIPFGSGRRICPGISFAFQVMPLILASLLHGFD 159 (198)
Q Consensus 81 p~g~~v~~~~~~~~~d~~~~-~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~ 159 (198)
|||+.|.++.+++|+||++| +||++|+||||++.+. ..+..|+|||.|+|+|+|++||++|++++++.|+++|+
T Consensus 410 P~Gt~V~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~~-----~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~ 484 (516)
T PLN02290 410 PKGLSIWIPVLAIHHSEELWGKDANEFNPDRFAGRPF-----APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFS 484 (516)
T ss_pred CCCCEEEecHHHhcCChhhhCCChhhcCccccCCCCC-----CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhce
Confidence 99999999999999999999 8999999999995321 12357999999999999999999999999999999999
Q ss_pred eecCCCCCCCcccccceeeecccCeeEEEEecC
Q 037793 160 LATPLDEPVDMEEAKSLTITRATPLKVLLTPRL 192 (198)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~ 192 (198)
+++.++.. .......+..|..++.+.+++|.
T Consensus 485 ~~~~~~~~--~~~~~~~~~~p~~~~~~~~~~~~ 515 (516)
T PLN02290 485 FTISDNYR--HAPVVVLTIKPKYGVQVCLKPLN 515 (516)
T ss_pred EeeCCCcc--cCccceeeecCCCCCeEEEEeCC
Confidence 99876532 12223567778889999999986
No 17
>PLN02500 cytochrome P450 90B1
Probab=100.00 E-value=5.2e-46 Score=315.65 Aligned_cols=185 Identities=21% Similarity=0.362 Sum_probs=157.8
Q ss_pred ChhHHHHHHHHHHhCHHHHHHHHHHHhHhhC-----CCCCCCHhhhccChhHHHHHHHHhcCCCCCCCCCceeeccccee
Q 037793 1 PLTTLTWAISLLLNNRDALKKAQDELNIHVG-----ANRQVNESDIKNLVYLQAILKETMRLYPAAPLLLPHQSMEDCTI 75 (198)
Q Consensus 1 t~~~l~w~l~~l~~~p~~~~~l~~Ei~~~~~-----~~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~ 75 (198)
|+++++|++++|+.||++|+|+++|++++.+ .+..++.+++.++||++|||+|+||++|+++.. +|.+.+|+++
T Consensus 295 ta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~-~R~~~~d~~~ 373 (490)
T PLN02500 295 SSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFL-HRKALKDVRY 373 (490)
T ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCe-eeEeCCCcee
Confidence 6899999999999999999999999998863 234578999999999999999999999999986 7999999999
Q ss_pred cCeEeCCCCEEEEehhhhhcCCCCCCCCCCCCCCCcCCCCCCcCc----cCCCCceeccCCCCCCCccHHHHHHHHHHHH
Q 037793 76 SGYHVPAGTQLFVNAWKVHHDPKVWKEPCKFLPERFLTTHKDIDL----RGQNFELIPFGSGRRICPGISFAFQVMPLIL 151 (198)
Q Consensus 76 ~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~----~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l 151 (198)
+||.||||+.|.++.+++|+||++|+||++|+||||++++..... ...++.|+|||.|+|.|+|++||++|+++++
T Consensus 374 ~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~l 453 (490)
T PLN02500 374 KGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFI 453 (490)
T ss_pred CCEEECCCCEEEechhhcccCcccCCCccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999975421110 1235689999999999999999999999999
Q ss_pred HHHhHhceeecCCCCCCCcccccceeeecccCeeEEEEe
Q 037793 152 ASLLHGFDLATPLDEPVDMEEAKSLTITRATPLKVLLTP 190 (198)
Q Consensus 152 ~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 190 (198)
+.|+++|+|++.+++. ... . ..+ .++.++.+++++
T Consensus 454 a~ll~~f~~~~~~~~~-~~~-~-~~~-~~~~~l~~~~~~ 488 (490)
T PLN02500 454 HHLVLNFNWELAEADQ-AFA-F-PFV-DFPKGLPIRVRR 488 (490)
T ss_pred HHHHhccEEEEcCCCc-cee-c-ccc-cCCCCceEEEEe
Confidence 9999999999876543 111 1 122 334688888765
No 18
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00 E-value=7.5e-46 Score=316.50 Aligned_cols=192 Identities=48% Similarity=0.907 Sum_probs=166.7
Q ss_pred ChhHHHHHHHHHHhCHHHHHHHHHHHhHhhCCCCCCCHhhhccChhHHHHHHHHhcCCCCCCCCCceeecccceecCeEe
Q 037793 1 PLTTLTWAISLLLNNRDALKKAQDELNIHVGANRQVNESDIKNLVYLQAILKETMRLYPAAPLLLPHQSMEDCTISGYHV 80 (198)
Q Consensus 1 t~~~l~w~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~~i 80 (198)
|+++++|++++|++||++|+|+++|++++.+....++.+++.++||++|||+|+||++|+++..++|.+.+|++++|+.|
T Consensus 313 ta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~i 392 (517)
T PLN02687 313 TSSTVEWAIAELIRHPDILKKAQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHI 392 (517)
T ss_pred hHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEE
Confidence 68899999999999999999999999999887777899999999999999999999999999866899999999999999
Q ss_pred CCCCEEEEehhhhhcCCCCCCCCCCCCCCCcCCCCCCc--CccCCCCceeccCCCCCCCccHHHHHHHHHHHHHHHhHhc
Q 037793 81 PAGTQLFVNAWKVHHDPKVWKEPCKFLPERFLTTHKDI--DLRGQNFELIPFGSGRRICPGISFAFQVMPLILASLLHGF 158 (198)
Q Consensus 81 p~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~--~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f 158 (198)
|+|+.|.++.+.+|+||++|+||++|+||||++.+... .....+..|+|||.|+|+|+|++||++|++++++.|+++|
T Consensus 393 p~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f 472 (517)
T PLN02687 393 PKGATLLVNVWAIARDPEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAF 472 (517)
T ss_pred CCCCEEEEecHHhcCCcccCCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999754211 1112356899999999999999999999999999999999
Q ss_pred eeecCCCCC---CCcccccceeeecccCeeEEEEecC
Q 037793 159 DLATPLDEP---VDMEEAKSLTITRATPLKVLLTPRL 192 (198)
Q Consensus 159 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~R~ 192 (198)
++++.++.. .+.....+....+..++.+.+++|.
T Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~ 509 (517)
T PLN02687 473 DWELADGQTPDKLNMEEAYGLTLQRAVPLMVHPRPRL 509 (517)
T ss_pred ceecCCCCCcccCCcccccceeeecCCCeEEeeccCC
Confidence 999886532 2222333455555678899999985
No 19
>PLN02966 cytochrome P450 83A1
Probab=100.00 E-value=5.7e-46 Score=316.23 Aligned_cols=191 Identities=37% Similarity=0.741 Sum_probs=163.0
Q ss_pred ChhHHHHHHHHHHhCHHHHHHHHHHHhHhhCCC--CCCCHhhhccChhHHHHHHHHhcCCCCCCCCCceeecccceecCe
Q 037793 1 PLTTLTWAISLLLNNRDALKKAQDELNIHVGAN--RQVNESDIKNLVYLQAILKETMRLYPAAPLLLPHQSMEDCTISGY 78 (198)
Q Consensus 1 t~~~l~w~l~~l~~~p~~~~~l~~Ei~~~~~~~--~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~ 78 (198)
|+++++|++++|++||++|+|+++|++++++.+ ..++++++.++||++|||+|+||++|+++...+|.+.+|++++||
T Consensus 305 ta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~ 384 (502)
T PLN02966 305 AAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGY 384 (502)
T ss_pred hHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccE
Confidence 789999999999999999999999999998643 357899999999999999999999999998768999999999999
Q ss_pred EeCCCCEEEEehhhhhcCCCCC-CCCCCCCCCCcCCCCCCcCccCCCCceeccCCCCCCCccHHHHHHHHHHHHHHHhHh
Q 037793 79 HVPAGTQLFVNAWKVHHDPKVW-KEPCKFLPERFLTTHKDIDLRGQNFELIPFGSGRRICPGISFAFQVMPLILASLLHG 157 (198)
Q Consensus 79 ~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~ 157 (198)
.|||||.|.++.+.+||||++| +||++|+||||++.+.. ....+..|+|||.|+|+|+|++||++|++++++.|+++
T Consensus 385 ~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeRwl~~~~~--~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~ 462 (502)
T PLN02966 385 DIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEVD--FKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLN 462 (502)
T ss_pred EECCCCEEEEecccccCCcccccCChhhCChhhhcCCCCC--cCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999 99999999999965421 11235689999999999999999999999999999999
Q ss_pred ceeecCCCCC---CCcccccceeeecccCeeEEEEecCCCC
Q 037793 158 FDLATPLDEP---VDMEEAKSLTITRATPLKVLLTPRLSAS 195 (198)
Q Consensus 158 f~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~R~~~~ 195 (198)
|+|++.++.. ++.....+.+..++. .+.+++|+...
T Consensus 463 f~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 501 (502)
T PLN02966 463 FNFKLPNGMKPDDINMDVMTGLAMHKSQ--HLKLVPEKVNK 501 (502)
T ss_pred ceeeCCCCCCcccCCcccccCeeeccCC--CeEEEEEeCCC
Confidence 9999887642 223334455553333 55677777654
No 20
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00 E-value=1.1e-45 Score=314.18 Aligned_cols=189 Identities=24% Similarity=0.365 Sum_probs=163.9
Q ss_pred ChhHHHHHHHHHHhCHHHHHHHHHHHhHhhCCC-CCCCHhhhccChhHHHHHHHHhcCCCCCCCCCceeeccccee-cCe
Q 037793 1 PLTTLTWAISLLLNNRDALKKAQDELNIHVGAN-RQVNESDIKNLVYLQAILKETMRLYPAAPLLLPHQSMEDCTI-SGY 78 (198)
Q Consensus 1 t~~~l~w~l~~l~~~p~~~~~l~~Ei~~~~~~~-~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~-~g~ 78 (198)
|+++++|++++|++||++|+||++|++++.+.+ ..++.+++.++|||+|||+|+||++|+++.. .|.+.+|.++ +|+
T Consensus 309 ta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~~~l~~LpYl~avi~EtLRl~p~v~~~-~r~~~~d~~~~~G~ 387 (502)
T PLN02426 309 VASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFEEMKEMHYLHAALYESMRLFPPVQFD-SKFAAEDDVLPDGT 387 (502)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCHHHHhcChHHHHHHHHHHhCCCCCCCc-ceeeccCCCcCCCc
Confidence 789999999999999999999999999988753 3679999999999999999999999999987 4888888776 899
Q ss_pred EeCCCCEEEEehhhhhcCCCCC-CCCCCCCCCCcCCCCCCcCccCCCCceeccCCCCCCCccHHHHHHHHHHHHHHHhHh
Q 037793 79 HVPAGTQLFVNAWKVHHDPKVW-KEPCKFLPERFLTTHKDIDLRGQNFELIPFGSGRRICPGISFAFQVMPLILASLLHG 157 (198)
Q Consensus 79 ~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~ 157 (198)
.||||+.|.++.+++||||++| +||++|+||||+++.. .....++.|+|||+|+|.|+|++||++|++++++.++++
T Consensus 388 ~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~--~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~ 465 (502)
T PLN02426 388 FVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGV--FVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRR 465 (502)
T ss_pred EECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCC--cCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999 9999999999996321 112235689999999999999999999999999999999
Q ss_pred ceeecCCCCCCCcccccceeeecccCeeEEEEecC
Q 037793 158 FDLATPLDEPVDMEEAKSLTITRATPLKVLLTPRL 192 (198)
Q Consensus 158 f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~ 192 (198)
|+++..++.........+.++.++.++++++++|.
T Consensus 466 f~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~r~ 500 (502)
T PLN02426 466 FDIEVVGRSNRAPRFAPGLTATVRGGLPVRVRERV 500 (502)
T ss_pred ceEEEecCCCCCCcccceeEEecCCCEEEEEEEcc
Confidence 99998654322223334577788899999999985
No 21
>PLN02655 ent-kaurene oxidase
Probab=100.00 E-value=1.5e-45 Score=311.06 Aligned_cols=188 Identities=35% Similarity=0.616 Sum_probs=167.6
Q ss_pred ChhHHHHHHHHHHhCHHHHHHHHHHHhHhhCCCCCCCHhhhccChhHHHHHHHHhcCCCCCCCCCceeecccceecCeEe
Q 037793 1 PLTTLTWAISLLLNNRDALKKAQDELNIHVGANRQVNESDIKNLVYLQAILKETMRLYPAAPLLLPHQSMEDCTISGYHV 80 (198)
Q Consensus 1 t~~~l~w~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~~i 80 (198)
|+++++|++++|+.||++|+|+++|++.+++... ++.+++.++||++++++|+||++|+++...+|.+.+|++++|+.|
T Consensus 278 ta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~i 356 (466)
T PLN02655 278 TLVTTEWAMYELAKNPDKQERLYREIREVCGDER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDI 356 (466)
T ss_pred HHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCC-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEE
Confidence 6889999999999999999999999999988644 899999999999999999999999999887899999999999999
Q ss_pred CCCCEEEEehhhhhcCCCCCCCCCCCCCCCcCCCCCCcCccCCCCceeccCCCCCCCccHHHHHHHHHHHHHHHhHhcee
Q 037793 81 PAGTQLFVNAWKVHHDPKVWKEPCKFLPERFLTTHKDIDLRGQNFELIPFGSGRRICPGISFAFQVMPLILASLLHGFDL 160 (198)
Q Consensus 81 p~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~ 160 (198)
|||+.|+++.+++|+||++|+||++|+||||++.+.. ....+.++|||.|+|.|+|++||++|++++++.||++|++
T Consensus 357 p~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~~~~---~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~ 433 (466)
T PLN02655 357 PAGTQIAINIYGCNMDKKRWENPEEWDPERFLGEKYE---SADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEW 433 (466)
T ss_pred CCCCEEEecHHHhcCCcccCCChhccCccccCCCCcc---cCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEE
Confidence 9999999999999999999999999999999975421 1234689999999999999999999999999999999999
Q ss_pred ecCCCCCCCcccccceeeecccCeeEEEEecCC
Q 037793 161 ATPLDEPVDMEEAKSLTITRATPLKVLLTPRLS 193 (198)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~ 193 (198)
++.++.. ......+++..++.++.+.+++|.+
T Consensus 434 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~~ 465 (466)
T PLN02655 434 RLREGDE-EKEDTVQLTTQKLHPLHAHLKPRGS 465 (466)
T ss_pred EeCCCCc-cccchhheeEeecCCcEEEEeecCC
Confidence 9876643 2233456677788899999999864
No 22
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00 E-value=9.6e-46 Score=315.80 Aligned_cols=187 Identities=27% Similarity=0.411 Sum_probs=158.6
Q ss_pred ChhHHHHHHHHHHhCHHHHHHHHHHHhHhhCC--------------------CCCCCHhhhccChhHHHHHHHHhcCCCC
Q 037793 1 PLTTLTWAISLLLNNRDALKKAQDELNIHVGA--------------------NRQVNESDIKNLVYLQAILKETMRLYPA 60 (198)
Q Consensus 1 t~~~l~w~l~~l~~~p~~~~~l~~Ei~~~~~~--------------------~~~~~~~~~~~~~~l~a~i~E~lRl~~~ 60 (198)
|+++++|++++|++||++|+||++|++++++. +..++++++.++||++|||+|+||++|+
T Consensus 308 Ta~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~ 387 (516)
T PLN03195 308 TATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPA 387 (516)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCC
Confidence 78999999999999999999999999987642 2357899999999999999999999999
Q ss_pred CCCCCceeeccccee-cCeEeCCCCEEEEehhhhhcCCCCC-CCCCCCCCCCcCCCCCCcCccCCCCceeccCCCCCCCc
Q 037793 61 APLLLPHQSMEDCTI-SGYHVPAGTQLFVNAWKVHHDPKVW-KEPCKFLPERFLTTHKDIDLRGQNFELIPFGSGRRICP 138 (198)
Q Consensus 61 ~~~~~~r~~~~d~~~-~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~ 138 (198)
++... |.+.+|..+ +|+.||||+.|.++.+++|+||++| +||++|+||||++.+.. ....++.|+|||+|+|+|+
T Consensus 388 ~p~~~-r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~~--~~~~~~~~~pFG~G~R~Ci 464 (516)
T PLN03195 388 VPQDP-KGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWIKDGVF--QNASPFKFTAFQAGPRICL 464 (516)
T ss_pred Ccchh-hhhccCcCcCCCcEECCCCEEEEehHhhccChhhhccChhhcCCcccCCCCCc--CCCCCceEeccCCCCCcCc
Confidence 99884 555565554 8999999999999999999999999 99999999999964310 1124567999999999999
Q ss_pred cHHHHHHHHHHHHHHHhHhceeecCCCCCCCcccccceeeecccCeeEEEEecC
Q 037793 139 GISFAFQVMPLILASLLHGFDLATPLDEPVDMEEAKSLTITRATPLKVLLTPRL 192 (198)
Q Consensus 139 G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~ 192 (198)
|++||++|++++++.|+++|++++.++.+. ......++.++.++++.+++|.
T Consensus 465 G~~lA~~e~~~~la~ll~~f~~~~~~~~~~--~~~~~~~~~~~~~~~v~~~~r~ 516 (516)
T PLN03195 465 GKDSAYLQMKMALALLCRFFKFQLVPGHPV--KYRMMTILSMANGLKVTVSRRS 516 (516)
T ss_pred CHHHHHHHHHHHHHHHHHhceeEecCCCcc--eeeeeeEEecCCCEEEEEEeCC
Confidence 999999999999999999999998755432 2223345667889999999884
No 23
>PLN03018 homomethionine N-hydroxylase
Probab=100.00 E-value=2.7e-45 Score=313.65 Aligned_cols=193 Identities=35% Similarity=0.646 Sum_probs=166.4
Q ss_pred ChhHHHHHHHHHHhCHHHHHHHHHHHhHhhCCCCCCCHhhhccChhHHHHHHHHhcCCCCCCCCCceeecccceecCeEe
Q 037793 1 PLTTLTWAISLLLNNRDALKKAQDELNIHVGANRQVNESDIKNLVYLQAILKETMRLYPAAPLLLPHQSMEDCTISGYHV 80 (198)
Q Consensus 1 t~~~l~w~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~~i 80 (198)
|+++++|++++|+.||++|+|+++||+++++.+..++.+++.++||++|||+|+||++|+++...+|.+.+|++++||.|
T Consensus 330 ta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~I 409 (534)
T PLN03018 330 PANNMEWTLGEMLKNPEILRKALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFI 409 (534)
T ss_pred HHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEE
Confidence 68899999999999999999999999999987777899999999999999999999999999876799999999999999
Q ss_pred CCCCEEEEehhhhhcCCCCCCCCCCCCCCCcCCCCCCcC---ccCCCCceeccCCCCCCCccHHHHHHHHHHHHHHHhHh
Q 037793 81 PAGTQLFVNAWKVHHDPKVWKEPCKFLPERFLTTHKDID---LRGQNFELIPFGSGRRICPGISFAFQVMPLILASLLHG 157 (198)
Q Consensus 81 p~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~---~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~ 157 (198)
|||+.|.++.+++|+||++|+||++|+||||++.++... ....+..|+|||.|+|.|+|++||++|+++++++|+++
T Consensus 410 pkGt~V~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~ 489 (534)
T PLN03018 410 PKGSHIHVCRPGLGRNPKIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQG 489 (534)
T ss_pred CCCCEEEEChHHhcCCcccCCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999996542110 01235689999999999999999999999999999999
Q ss_pred ceeecCCCC-CCCcccccceeeecccCeeEEEEecCCC
Q 037793 158 FDLATPLDE-PVDMEEAKSLTITRATPLKVLLTPRLSA 194 (198)
Q Consensus 158 f~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~R~~~ 194 (198)
|++++.++. +.+.....+.+. .+.++++.+++|..+
T Consensus 490 f~~~~~~~~~~~~~~~~~~~~~-~p~~~~v~~~~R~~~ 526 (534)
T PLN03018 490 FNWKLHQDFGPLSLEEDDASLL-MAKPLLLSVEPRLAP 526 (534)
T ss_pred ceEEeCCCCCCCCcccccccee-cCCCeEEEEEecccc
Confidence 999987653 333322224444 456999999999543
No 24
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00 E-value=3.7e-45 Score=308.48 Aligned_cols=180 Identities=21% Similarity=0.369 Sum_probs=157.1
Q ss_pred ChhHHHHHHHHHHhCHHHHHHHHHHHhHhhCC---CCCCCHhhhccChhHHHHHHHHhcCCCCCCCCCceeecccceecC
Q 037793 1 PLTTLTWAISLLLNNRDALKKAQDELNIHVGA---NRQVNESDIKNLVYLQAILKETMRLYPAAPLLLPHQSMEDCTISG 77 (198)
Q Consensus 1 t~~~l~w~l~~l~~~p~~~~~l~~Ei~~~~~~---~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g 77 (198)
|+++++|++++|+.||++|+|+++|++++.+. +..++++++.++||++|+|+|+||++|+++.. .|.+.+|++++|
T Consensus 280 t~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~-~R~~~~d~~l~g 358 (463)
T PLN02774 280 VSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNGV-LRKTTQDMELNG 358 (463)
T ss_pred HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCc-ccccCCCeeECC
Confidence 68899999999999999999999999998753 34678999999999999999999999999866 699999999999
Q ss_pred eEeCCCCEEEEehhhhhcCCCCCCCCCCCCCCCcCCCCCCcCccCCCCceeccCCCCCCCccHHHHHHHHHHHHHHHhHh
Q 037793 78 YHVPAGTQLFVNAWKVHHDPKVWKEPCKFLPERFLTTHKDIDLRGQNFELIPFGSGRRICPGISFAFQVMPLILASLLHG 157 (198)
Q Consensus 78 ~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~ 157 (198)
|.||||+.|+++.+.+|+||++|+||++|+||||++.+. . ....|+|||+|+|.|+|++||++|++++++.|+++
T Consensus 359 ~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~----~-~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~ 433 (463)
T PLN02774 359 YVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSL----E-SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTR 433 (463)
T ss_pred EEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCc----C-CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999996442 1 12359999999999999999999999999999999
Q ss_pred ceeecCCCCCCCcccccceeeecccCeeEEEEe
Q 037793 158 FDLATPLDEPVDMEEAKSLTITRATPLKVLLTP 190 (198)
Q Consensus 158 f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 190 (198)
|++++.++... ... .++.++.++++++++
T Consensus 434 f~~~~~~~~~~--~~~--~~~~p~~g~~~~~~~ 462 (463)
T PLN02774 434 YRWEEVGGDKL--MKF--PRVEAPNGLHIRVSP 462 (463)
T ss_pred ceEEECCCCcc--ccC--CCCCCCCCceEEeee
Confidence 99999876432 111 133367889998874
No 25
>PLN02936 epsilon-ring hydroxylase
Probab=100.00 E-value=8.8e-45 Score=308.03 Aligned_cols=190 Identities=35% Similarity=0.589 Sum_probs=164.7
Q ss_pred ChhHHHHHHHHHHhCHHHHHHHHHHHhHhhCCCCCCCHhhhccChhHHHHHHHHhcCCCCCCCCCceeecccceecCeEe
Q 037793 1 PLTTLTWAISLLLNNRDALKKAQDELNIHVGANRQVNESDIKNLVYLQAILKETMRLYPAAPLLLPHQSMEDCTISGYHV 80 (198)
Q Consensus 1 t~~~l~w~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~~i 80 (198)
||++++|++++|++||++|+|+++|++.+++. ..++++++.+||||+|||+|+||++|+.+...+|.+.+|+.++|+.|
T Consensus 294 ta~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~I 372 (489)
T PLN02936 294 TGSVLTWTLYLLSKNPEALRKAQEELDRVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKV 372 (489)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEE
Confidence 68999999999999999999999999999875 45789999999999999999999999998887777778888899999
Q ss_pred CCCCEEEEehhhhhcCCCCCCCCCCCCCCCcCCCCCCcCccCCCCceeccCCCCCCCccHHHHHHHHHHHHHHHhHhcee
Q 037793 81 PAGTQLFVNAWKVHHDPKVWKEPCKFLPERFLTTHKDIDLRGQNFELIPFGSGRRICPGISFAFQVMPLILASLLHGFDL 160 (198)
Q Consensus 81 p~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~ 160 (198)
|+|+.|+++.+.+|+||++|+||++|+||||+..+........+..|+|||.|+|.|+|++||++|++++++.|+++|++
T Consensus 373 p~Gt~v~~~~~~~~rd~~~~~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~ 452 (489)
T PLN02936 373 NAGQDIMISVYNIHRSPEVWERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDL 452 (489)
T ss_pred CCCCEEEecHHhccCChhhCCCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeE
Confidence 99999999999999999999999999999999644211112234689999999999999999999999999999999999
Q ss_pred ecCCCCCCCcccccceeeecccCeeEEEEecCC
Q 037793 161 ATPLDEPVDMEEAKSLTITRATPLKVLLTPRLS 193 (198)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~ 193 (198)
++++++++.. ..+.+..++.++.|.+++|..
T Consensus 453 ~~~~~~~~~~--~~~~~~~~~~~~~v~~~~R~~ 483 (489)
T PLN02936 453 ELVPDQDIVM--TTGATIHTTNGLYMTVSRRRV 483 (489)
T ss_pred EecCCCccce--ecceEEeeCCCeEEEEEeeeC
Confidence 9887644322 234556677899999999964
No 26
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00 E-value=9.3e-45 Score=305.23 Aligned_cols=181 Identities=24% Similarity=0.360 Sum_probs=160.4
Q ss_pred ChhHHHHHHHHHHhCHHHHHHHHHHHhHhhC----CCCCCCHhhhccChhHHHHHHHHhcCCCCCCCCCceeecccceec
Q 037793 1 PLTTLTWAISLLLNNRDALKKAQDELNIHVG----ANRQVNESDIKNLVYLQAILKETMRLYPAAPLLLPHQSMEDCTIS 76 (198)
Q Consensus 1 t~~~l~w~l~~l~~~p~~~~~l~~Ei~~~~~----~~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~ 76 (198)
|+++++|++++|+.||++|+|+++|++++.+ ....++.+++.++||++|||+|++|++|+++.. +|.+.+|++++
T Consensus 267 ts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~-~R~~~~d~~l~ 345 (452)
T PLN03141 267 VPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGV-MRKAMKDVEIK 345 (452)
T ss_pred HHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCc-ceeecCCeeEC
Confidence 6889999999999999999999999988753 234578899999999999999999999998755 79999999999
Q ss_pred CeEeCCCCEEEEehhhhhcCCCCCCCCCCCCCCCcCCCCCCcCccCCCCceeccCCCCCCCccHHHHHHHHHHHHHHHhH
Q 037793 77 GYHVPAGTQLFVNAWKVHHDPKVWKEPCKFLPERFLTTHKDIDLRGQNFELIPFGSGRRICPGISFAFQVMPLILASLLH 156 (198)
Q Consensus 77 g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~ 156 (198)
||.||||+.|.++.+++|+||++|+||++|+||||++.+. .+..|+|||+|+|+|+|++||++|++++++.|++
T Consensus 346 g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~------~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~ 419 (452)
T PLN03141 346 GYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWRWQEKDM------NNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVT 419 (452)
T ss_pred CEEECCCCEEEEehHhccCCchhcCCccccCcccccCCCC------CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999996531 3567999999999999999999999999999999
Q ss_pred hceeecCCCCCCCcccccceeeecccCeeEEEEecCC
Q 037793 157 GFDLATPLDEPVDMEEAKSLTITRATPLKVLLTPRLS 193 (198)
Q Consensus 157 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~ 193 (198)
+|+++..++... ...++.+..++.+.+++|.-
T Consensus 420 ~f~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 451 (452)
T PLN03141 420 RFRWVAEEDTIV-----NFPTVRMKRKLPIWVTRIDD 451 (452)
T ss_pred cCeeecCCCCee-----ecccccCCCCceEEEEeCCC
Confidence 999998765321 12466778899999999963
No 27
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00 E-value=1.4e-43 Score=298.80 Aligned_cols=180 Identities=21% Similarity=0.386 Sum_probs=158.7
Q ss_pred ChhHHHHHHHHHHhCHHHHHHHHHHHhHhhCC---CCCCCHhhhccChhHHHHHHHHhcCCCCCCCCCceeecccceecC
Q 037793 1 PLTTLTWAISLLLNNRDALKKAQDELNIHVGA---NRQVNESDIKNLVYLQAILKETMRLYPAAPLLLPHQSMEDCTISG 77 (198)
Q Consensus 1 t~~~l~w~l~~l~~~p~~~~~l~~Ei~~~~~~---~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g 77 (198)
|+++++|++++|++||++|+|+++|++++.+. +..++.+++.+++|++|+|+|++|++|++++. .|.+.+|+.++|
T Consensus 280 ta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~-~R~~~~d~~i~g 358 (463)
T PLN02196 280 TASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFT-FREAVEDVEYEG 358 (463)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCcccc-ceeeccccccCC
Confidence 68899999999999999999999999988753 35578999999999999999999999999887 488999999999
Q ss_pred eEeCCCCEEEEehhhhhcCCCCCCCCCCCCCCCcCCCCCCcCccCCCCceeccCCCCCCCccHHHHHHHHHHHHHHHhHh
Q 037793 78 YHVPAGTQLFVNAWKVHHDPKVWKEPCKFLPERFLTTHKDIDLRGQNFELIPFGSGRRICPGISFAFQVMPLILASLLHG 157 (198)
Q Consensus 78 ~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~ 157 (198)
|.||||+.|.++.+++|+||++|+||++|+||||++.. .+..|+|||.|+|.|+|++||++|++++++.|+++
T Consensus 359 ~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~~-------~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~ 431 (463)
T PLN02196 359 YLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVAP-------KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTK 431 (463)
T ss_pred EEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCCC-------CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999532 34679999999999999999999999999999999
Q ss_pred ceeecCCCCCCCcccccceeeecccCeeEEEEec
Q 037793 158 FDLATPLDEPVDMEEAKSLTITRATPLKVLLTPR 191 (198)
Q Consensus 158 f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R 191 (198)
|++++++++ .++. ...+..|+.++.++++.+
T Consensus 432 f~~~~~~~~-~~~~--~~~~~~p~~~~~~~~~~~ 462 (463)
T PLN02196 432 YRWSIVGTS-NGIQ--YGPFALPQNGLPIALSRK 462 (463)
T ss_pred cEEEEcCCC-CceE--EcccccCCCCceEEEecC
Confidence 999987653 2333 233445788888887653
No 28
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00 E-value=2e-43 Score=299.65 Aligned_cols=183 Identities=23% Similarity=0.392 Sum_probs=160.9
Q ss_pred ChhHHHHHHHHHHhCHHHHHHHHHHHhHhhCCC----CCCCHhhhccChhHHHHHHHHhcCCCCCCCCCceeecccceec
Q 037793 1 PLTTLTWAISLLLNNRDALKKAQDELNIHVGAN----RQVNESDIKNLVYLQAILKETMRLYPAAPLLLPHQSMEDCTIS 76 (198)
Q Consensus 1 t~~~l~w~l~~l~~~p~~~~~l~~Ei~~~~~~~----~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~ 76 (198)
|+++++|++++|++||++|+|+++|++++++.. ..++.+++.++||++|+|+|++|++|+++.. .|.+.+|++++
T Consensus 303 ta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~-~R~~~~d~~~~ 381 (490)
T PLN02302 303 SGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTV-FREAKTDVEVN 381 (490)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccc-hhcccCCEeEC
Confidence 688999999999999999999999999987642 2378899999999999999999999999886 68899999999
Q ss_pred CeEeCCCCEEEEehhhhhcCCCCCCCCCCCCCCCcCCCCCCcCccCCCCceeccCCCCCCCccHHHHHHHHHHHHHHHhH
Q 037793 77 GYHVPAGTQLFVNAWKVHHDPKVWKEPCKFLPERFLTTHKDIDLRGQNFELIPFGSGRRICPGISFAFQVMPLILASLLH 156 (198)
Q Consensus 77 g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~ 156 (198)
|+.||||+.|.++.+++|+||++|+||++|+||||++.. ..+..|+|||.|+|.|+|++||.+|++++++.|++
T Consensus 382 g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~~~~~------~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~ 455 (490)
T PLN02302 382 GYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRWDNYT------PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLL 455 (490)
T ss_pred CEEECCCCEEEeeHHHhcCCcccCCCccccChhhcCCCC------CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999643 13467999999999999999999999999999999
Q ss_pred hceeecCCCCCCCcccccceeeecccCeeEEEEecCC
Q 037793 157 GFDLATPLDEPVDMEEAKSLTITRATPLKVLLTPRLS 193 (198)
Q Consensus 157 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~ 193 (198)
+|++++.++. .++. ......|..++.+++++|.|
T Consensus 456 ~f~~~~~~~~-~~~~--~~~~~~p~~~~~~~~~~~~~ 489 (490)
T PLN02302 456 GYRLERLNPG-CKVM--YLPHPRPKDNCLARITKVAS 489 (490)
T ss_pred cCeeEEcCCC-Ccce--eCCCCCCCCCceEEEEeccC
Confidence 9999987643 2222 12235678899999999976
No 29
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00 E-value=3.2e-43 Score=297.09 Aligned_cols=186 Identities=23% Similarity=0.358 Sum_probs=163.1
Q ss_pred ChhHHHHHHHHHHhCHHHHHHHHHHHhHhhC---CCCCCCHhhhccChhHHHHHHHHhcCCCCCCCCCceeecccceecC
Q 037793 1 PLTTLTWAISLLLNNRDALKKAQDELNIHVG---ANRQVNESDIKNLVYLQAILKETMRLYPAAPLLLPHQSMEDCTISG 77 (198)
Q Consensus 1 t~~~l~w~l~~l~~~p~~~~~l~~Ei~~~~~---~~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g 77 (198)
|+++++|++++|++||++|+|+++|++++.+ ....++.+++.++||++|+++|++|++|+++.. .|.+.+|++++|
T Consensus 283 ta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~-~R~~~~d~~~~G 361 (472)
T PLN02987 283 TSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGI-FRRAMTDIEVKG 361 (472)
T ss_pred HHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCc-cccCCCCeeECC
Confidence 5789999999999999999999999998874 234578899999999999999999999999865 699999999999
Q ss_pred eEeCCCCEEEEehhhhhcCCCCCCCCCCCCCCCcCCCCCCcCccCCCCceeccCCCCCCCccHHHHHHHHHHHHHHHhHh
Q 037793 78 YHVPAGTQLFVNAWKVHHDPKVWKEPCKFLPERFLTTHKDIDLRGQNFELIPFGSGRRICPGISFAFQVMPLILASLLHG 157 (198)
Q Consensus 78 ~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~ 157 (198)
|.||||+.|.++.+.+|+||++|+||++|+||||++.+.. ...+..++|||+|+|.|+|++||++|++++++.|+++
T Consensus 362 ~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~---~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~ 438 (472)
T PLN02987 362 YTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGT---TVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTR 438 (472)
T ss_pred EEECCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCC---CCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999965321 1134679999999999999999999999999999999
Q ss_pred ceeecCCCCCCCcccccceeeecccCeeEEEEecCCC
Q 037793 158 FDLATPLDEPVDMEEAKSLTITRATPLKVLLTPRLSA 194 (198)
Q Consensus 158 f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~~ 194 (198)
|++++.++....+ ..++.|..++.+++++|..+
T Consensus 439 f~~~~~~~~~~~~----~~~~~p~~~~~~~~~~r~~~ 471 (472)
T PLN02987 439 FSWVPAEQDKLVF----FPTTRTQKRYPINVKRRDVA 471 (472)
T ss_pred eEEEECCCCceee----cccccCCCCceEEEEecccC
Confidence 9999876543222 34667888999999999765
No 30
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.4e-43 Score=282.46 Aligned_cols=190 Identities=28% Similarity=0.548 Sum_probs=167.0
Q ss_pred ChhHHHHHHHHHHhCHHHHHHHHHHHhHhhCCCCC-CCHhhhccChhHHHHHHHHhcCCCCCCCCCceeecccceecC--
Q 037793 1 PLTTLTWAISLLLNNRDALKKAQDELNIHVGANRQ-VNESDIKNLVYLQAILKETMRLYPAAPLLLPHQSMEDCTISG-- 77 (198)
Q Consensus 1 t~~~l~w~l~~l~~~p~~~~~l~~Ei~~~~~~~~~-~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g-- 77 (198)
|+.|.+|++++|++|||+++.+++|+.++++++.. ++.+.++++|.|+.||+|||||++|.+.+ -|.+.+|.++.+
T Consensus 289 s~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~~d~L~~lplL~~~IkEtLRL~~p~~~~-~R~v~~D~tv~~~~ 367 (486)
T KOG0684|consen 289 SSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLTYDQLKDLPLLDSCIKETLRLHPPAHSL-MRKVHEDLTVPGSD 367 (486)
T ss_pred ccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCCHHHHhcchHHHHHHHHHHhcCCchhhH-HHhhccceeeccCC
Confidence 56788999999999999999999999999988655 89999999999999999999999988877 499999999976
Q ss_pred --eEeCCCCEEEEehhhhhcCCCCCCCCCCCCCCCcCCCCCCcCccCCC--CceeccCCCCCCCccHHHHHHHHHHHHHH
Q 037793 78 --YHVPAGTQLFVNAWKVHHDPKVWKEPCKFLPERFLTTHKDIDLRGQN--FELIPFGSGRRICPGISFAFQVMPLILAS 153 (198)
Q Consensus 78 --~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~--~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ 153 (198)
|.||+|..|.+++..+|+||++|+||+.|+|+||++++++.+-.+.. +.|||||+|.+.|||+.||.+|++.++..
T Consensus 368 ~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l 447 (486)
T KOG0684|consen 368 GEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISL 447 (486)
T ss_pred cceecCCCCEEEeccccccCCccccCChhhCChhhccCCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999877543212223 34599999999999999999999999999
Q ss_pred HhHhceeecCCCCCCCcccccceeeecccCeeEEEEecC
Q 037793 154 LLHGFDLATPLDEPVDMEEAKSLTITRATPLKVLLTPRL 192 (198)
Q Consensus 154 ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~ 192 (198)
+|++|++|+.+|+.+++. +..++..|..+++++.+.|.
T Consensus 448 ~L~~fdleLid~~~P~~d-~s~~v~~P~g~v~irYK~R~ 485 (486)
T KOG0684|consen 448 LLRHFDLELIDGPFPEVD-YSRMVMQPEGDVRIRYKRRP 485 (486)
T ss_pred HHHHcceeecCCCCCCCC-HHHhhcCCCCCceEEEeecC
Confidence 999999999997433333 34457788999999999885
No 31
>PLN02648 allene oxide synthase
Probab=100.00 E-value=5.6e-38 Score=264.84 Aligned_cols=159 Identities=21% Similarity=0.407 Sum_probs=139.1
Q ss_pred hhHHHHHHHHHHhCHH-HHHHHHHHHhHhhCC-CCCCCHhhhccChhHHHHHHHHhcCCCCCCCCCceeecccceec---
Q 037793 2 LTTLTWAISLLLNNRD-ALKKAQDELNIHVGA-NRQVNESDIKNLVYLQAILKETMRLYPAAPLLLPHQSMEDCTIS--- 76 (198)
Q Consensus 2 ~~~l~w~l~~l~~~p~-~~~~l~~Ei~~~~~~-~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~--- 76 (198)
+++++|++++|+.||+ +|+||++|++.+++. +..++++++.+|+|++++|+|+||++|+++... |.+.+|++++
T Consensus 289 ~~~l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~-r~a~~d~~l~~~~ 367 (480)
T PLN02648 289 KIFFPALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQY-GRAREDFVIESHD 367 (480)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCccccc-ceecCCEEEecCC
Confidence 4689999999999995 999999999998863 456899999999999999999999999999874 7788999996
Q ss_pred -CeEeCCCCEEEEehhhhhcCCCCCCCCCCCCCCCcCCCCCCcCccCCCCceecc---------CCCCCCCccHHHHHHH
Q 037793 77 -GYHVPAGTQLFVNAWKVHHDPKVWKEPCKFLPERFLTTHKDIDLRGQNFELIPF---------GSGRRICPGISFAFQV 146 (198)
Q Consensus 77 -g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~F---------g~G~r~C~G~~lA~~e 146 (198)
||.||||+.|.++.+.+|+||++|+||++|||+||++++... ...+++| |+|+|.|+|++||++|
T Consensus 368 ~g~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~~-----~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e 442 (480)
T PLN02648 368 AAFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGEK-----LLKYVFWSNGRETESPTVGNKQCAGKDFVVLV 442 (480)
T ss_pred ceEEECCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCccc-----cccccccCCCcccCCCCCCCccCccHHHHHHH
Confidence 799999999999999999999999999999999998653211 1234444 6778999999999999
Q ss_pred HHHHHHHHhHhce-eecCCCC
Q 037793 147 MPLILASLLHGFD-LATPLDE 166 (198)
Q Consensus 147 ~~~~l~~ll~~f~-~~~~~~~ 166 (198)
++++++.|+++|+ +++.++.
T Consensus 443 ~~~~la~Ll~~f~~~~l~~~~ 463 (480)
T PLN02648 443 ARLFVAELFLRYDSFEIEVDT 463 (480)
T ss_pred HHHHHHHHHHHhCEEeecCCc
Confidence 9999999999998 9987653
No 32
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.4e-36 Score=252.52 Aligned_cols=159 Identities=33% Similarity=0.566 Sum_probs=139.6
Q ss_pred ChhHHHHHHHHHHhCHHHHHHHHHHHhHhhCCCCCCCHhhhccChhHHHHHHHHhcCCCCCCCCCceeecccceecCeEe
Q 037793 1 PLTTLTWAISLLLNNRDALKKAQDELNIHVGANRQVNESDIKNLVYLQAILKETMRLYPAAPLLLPHQSMEDCTISGYHV 80 (198)
Q Consensus 1 t~~~l~w~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~~i 80 (198)
|+++|+|+++.|++||++++++++|.+. +|+.++++|+||++|+++. .+|.+.+|++++|+.|
T Consensus 252 Ta~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~E~LR~~ppv~~-~~R~~~~d~~igg~~I 314 (411)
T COG2124 252 TANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVEETLRLYPPVPL-ARRVATEDVELGGYRI 314 (411)
T ss_pred HHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHHHHHHhCCchhc-cceeccCCEeeCCEEe
Confidence 7899999999999999999999998864 7999999999999999999 5899999999999999
Q ss_pred CCCCEEEEehhhhhcCCCCCCCCCCCCCCCcCCCCCCcCccCCCCceeccCCCCCCCccHHHHHHHHHHHHHHHhHhcee
Q 037793 81 PAGTQLFVNAWKVHHDPKVWKEPCKFLPERFLTTHKDIDLRGQNFELIPFGSGRRICPGISFAFQVMPLILASLLHGFDL 160 (198)
Q Consensus 81 p~g~~v~~~~~~~~~d~~~~~~p~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~ 160 (198)
|||+.|.++.+.+||||+.|++|++|||+||. ..|+|||+|+|.|+|.+||++|++++++.++++|++
T Consensus 315 p~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~------------~~~l~FG~G~H~ClG~~lA~~E~~~~l~~ll~r~~~ 382 (411)
T COG2124 315 PAGTVVLLSIGAANRDPEVFPDPDEFDPERFN------------NAHLPFGGGPHRCLGAALARLELKVALAELLRRFPL 382 (411)
T ss_pred CCCCEEEecHhhhcCChhhCCChhhcCCCCCC------------CCCcCCCCCCccccCHHHHHHHHHHHHHHHHHhCch
Confidence 99999999999999999999999999999995 358999999999999999999999999999999998
Q ss_pred ecCCCCCCCcccccceeeecccCeeEEEEec
Q 037793 161 ATPLDEPVDMEEAKSLTITRATPLKVLLTPR 191 (198)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R 191 (198)
....+ . . ......+..+..+..+.++.+
T Consensus 383 ~~~~~-~-~-~~~~~~~~~~~g~~~l~v~~~ 410 (411)
T COG2124 383 LLLAE-P-P-PLVRRPTLVPRGGERLPVRRR 410 (411)
T ss_pred hhcCC-C-C-CccccccccCCCcceeeeecC
Confidence 88765 2 1 112233444555666666654
No 33
>PF05952 ComX: Bacillus competence pheromone ComX; InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible. DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=61.48 E-value=4.7 Score=23.87 Aligned_cols=25 Identities=20% Similarity=0.330 Sum_probs=20.1
Q ss_pred HHHHHHHhCHHHHHHHHHHHhHhhC
Q 037793 7 WAISLLLNNRDALKKAQDELNIHVG 31 (198)
Q Consensus 7 w~l~~l~~~p~~~~~l~~Ei~~~~~ 31 (198)
-++.+|.+||++.++|.+.-.+.++
T Consensus 4 ~iV~YLv~nPevl~kl~~g~asLIG 28 (57)
T PF05952_consen 4 EIVNYLVQNPEVLEKLKEGEASLIG 28 (57)
T ss_pred HHHHHHHHChHHHHHHHcCCeeEec
Confidence 3678999999999999986666554
No 34
>PF08492 SRP72: SRP72 RNA-binding domain; InterPro: IPR013699 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=61.10 E-value=6.9 Score=23.37 Aligned_cols=9 Identities=44% Similarity=0.752 Sum_probs=7.1
Q ss_pred CCCCcCCCC
Q 037793 107 LPERFLTTH 115 (198)
Q Consensus 107 ~P~R~~~~~ 115 (198)
||||||...
T Consensus 44 DPERWLP~~ 52 (59)
T PF08492_consen 44 DPERWLPKR 52 (59)
T ss_pred CccccCchh
Confidence 899999644
No 35
>PF09201 SRX: SRX; InterPro: IPR015284 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel. This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=55.67 E-value=10 Score=26.76 Aligned_cols=22 Identities=18% Similarity=0.390 Sum_probs=16.5
Q ss_pred CCccHHHHHHHHHHHHHHHhHh
Q 037793 136 ICPGISFAFQVMPLILASLLHG 157 (198)
Q Consensus 136 ~C~G~~lA~~e~~~~l~~ll~~ 157 (198)
+|.|+.||+.++-.++..++..
T Consensus 19 N~~gKKFsE~QiN~FIs~lIts 40 (148)
T PF09201_consen 19 NCLGKKFSETQINAFISHLITS 40 (148)
T ss_dssp ETTS----HHHHHHHHHHHHHS
T ss_pred cccchHHHHHHHHHHHHHHhcC
Confidence 8999999999999999999864
No 36
>PF12508 DUF3714: Protein of unknown function (DUF3714) ; InterPro: IPR022187 Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=43.79 E-value=22 Score=26.97 Aligned_cols=44 Identities=23% Similarity=0.357 Sum_probs=32.4
Q ss_pred cChhHHHHHHHHhcCCCCCCCCCceeecccceecCeEeCCCCEEEE
Q 037793 43 NLVYLQAILKETMRLYPAAPLLLPHQSMEDCTISGYHVPAGTQLFV 88 (198)
Q Consensus 43 ~~~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~~ip~g~~v~~ 88 (198)
.-....|||.|..-+......- -...+|+.++|..||||+.+.-
T Consensus 51 ~~n~I~A~V~~~qtv~~Gs~vr--lRLle~i~i~g~~IPkgt~l~G 94 (200)
T PF12508_consen 51 EKNTIRAVVDGTQTVVDGSRVR--LRLLEDIQIGGILIPKGTYLYG 94 (200)
T ss_pred CCCeEEEEEecceEEeCCCEEE--EEEcCceEECCEEeCCCCEEEE
Confidence 3456778888888776654332 2445889999999999998865
No 37
>PF11138 DUF2911: Protein of unknown function (DUF2911); InterPro: IPR021314 This bacterial family of proteins has no known function.
Probab=39.72 E-value=37 Score=24.30 Aligned_cols=41 Identities=24% Similarity=0.370 Sum_probs=26.7
Q ss_pred eecccceecCeEeCCCCEEEEehh-------hhhcCCCCCCCCCCCCCC
Q 037793 68 QSMEDCTISGYHVPAGTQLFVNAW-------KVHHDPKVWKEPCKFLPE 109 (198)
Q Consensus 68 ~~~~d~~~~g~~ip~g~~v~~~~~-------~~~~d~~~~~~p~~f~P~ 109 (198)
...+|+.++|..||+|++-++... -++++...|.. ..+||+
T Consensus 51 ~f~~dv~igGk~l~AG~Ysl~tiP~~~~WtvI~n~~~~~wG~-~~Y~~~ 98 (145)
T PF11138_consen 51 TFSKDVTIGGKKLKAGTYSLFTIPGEDEWTVIFNKDTDQWGA-YNYDPS 98 (145)
T ss_pred EECCCeEECCEEcCCeeEEEEEecCCCeEEEEEECCCCccCc-cccCch
Confidence 456789999999999998766543 23555555644 334433
No 38
>PF15300 INT_SG_DDX_CT_C: INTS6/SAGE1/DDX26B/CT45 C-terminus
Probab=38.53 E-value=27 Score=21.32 Aligned_cols=15 Identities=27% Similarity=0.499 Sum_probs=12.4
Q ss_pred ChhHHHHHHHHhcCC
Q 037793 44 LVYLQAILKETMRLY 58 (198)
Q Consensus 44 ~~~l~a~i~E~lRl~ 58 (198)
..+++.+|+|++|+.
T Consensus 40 ~~fv~~~IkEA~RFk 54 (65)
T PF15300_consen 40 KQFVEMIIKEAARFK 54 (65)
T ss_pred HHHHHHHHHHHHHHH
Confidence 458999999999974
No 39
>PF08285 DPM3: Dolichol-phosphate mannosyltransferase subunit 3 (DPM3); InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=32.12 E-value=58 Score=21.29 Aligned_cols=28 Identities=21% Similarity=0.258 Sum_probs=23.2
Q ss_pred hHHHHHHHHHHhCHHHHHHHHHHHhHhh
Q 037793 3 TTLTWAISLLLNNRDALKKAQDELNIHV 30 (198)
Q Consensus 3 ~~l~w~l~~l~~~p~~~~~l~~Ei~~~~ 30 (198)
.++.|.++..-.+||..+.|++||+++.
T Consensus 54 ~~lgy~v~tFnDcpeA~~eL~~eI~eAK 81 (91)
T PF08285_consen 54 FTLGYGVATFNDCPEAAKELQKEIKEAK 81 (91)
T ss_pred HHHHHhhhccCCCHHHHHHHHHHHHHHH
Confidence 4567778888889999999999998864
No 40
>PRK06789 flagellar motor switch protein; Validated
Probab=31.92 E-value=54 Score=20.54 Aligned_cols=40 Identities=10% Similarity=0.163 Sum_probs=31.1
Q ss_pred HHHHHhcCCCCCCCCCceeeccc--ceecCeEeCCCCEEEEe
Q 037793 50 ILKETMRLYPAAPLLLPHQSMED--CTISGYHVPAGTQLFVN 89 (198)
Q Consensus 50 ~i~E~lRl~~~~~~~~~r~~~~d--~~~~g~~ip~g~~v~~~ 89 (198)
-++|.+.+.+..-..+-+.+.++ +.++|..|.+|..|.+.
T Consensus 21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~ 62 (74)
T PRK06789 21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN 62 (74)
T ss_pred EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence 37899999998777666666654 55679999999988764
No 41
>PF13993 YccJ: YccJ-like protein
Probab=31.20 E-value=81 Score=18.93 Aligned_cols=26 Identities=31% Similarity=0.219 Sum_probs=19.5
Q ss_pred ChhHHHHHHHHHHhCHHHH-HHHHHHH
Q 037793 1 PLTTLTWAISLLLNNRDAL-KKAQDEL 26 (198)
Q Consensus 1 t~~~l~w~l~~l~~~p~~~-~~l~~Ei 26 (198)
||.-++-++++|+.+.+.+ +++.+|-
T Consensus 14 TS~EIAeAIFElA~~dE~lAekIWeeG 40 (69)
T PF13993_consen 14 TSIEIAEAIFELANNDEVLAEKIWEEG 40 (69)
T ss_pred CCHHHHHHHHHHhcccHHHHHHHHHcc
Confidence 5677788999999998865 5666543
No 42
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=30.93 E-value=23 Score=20.72 Aligned_cols=11 Identities=45% Similarity=0.930 Sum_probs=9.1
Q ss_pred eccCCCCCCCc
Q 037793 128 IPFGSGRRICP 138 (198)
Q Consensus 128 ~~Fg~G~r~C~ 138 (198)
-+||-|.|.|-
T Consensus 12 ~kfg~GsrsC~ 22 (56)
T KOG3506|consen 12 RKFGQGSRSCR 22 (56)
T ss_pred cccCCCCccee
Confidence 36999999984
No 43
>PF07849 DUF1641: Protein of unknown function (DUF1641); InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long.
Probab=30.45 E-value=73 Score=17.40 Aligned_cols=18 Identities=11% Similarity=0.156 Sum_probs=14.8
Q ss_pred HHHHHHHHhCHHHHHHHH
Q 037793 6 TWAISLLLNNRDALKKAQ 23 (198)
Q Consensus 6 ~w~l~~l~~~p~~~~~l~ 23 (198)
.|-++-++++||+|.-|.
T Consensus 13 l~gl~~~l~DpdvqrgL~ 30 (42)
T PF07849_consen 13 LFGLLRALRDPDVQRGLG 30 (42)
T ss_pred HHHHHHHHcCHHHHHHHH
Confidence 467888999999988765
No 44
>PF11227 DUF3025: Protein of unknown function (DUF3025); InterPro: IPR021390 Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function.
Probab=29.83 E-value=28 Score=26.54 Aligned_cols=20 Identities=30% Similarity=0.718 Sum_probs=17.1
Q ss_pred hhhhcCCCCCCCCCCCCCCC
Q 037793 91 WKVHHDPKVWKEPCKFLPER 110 (198)
Q Consensus 91 ~~~~~d~~~~~~p~~f~P~R 110 (198)
+.-+.|+.+|.|.+.|+|.|
T Consensus 192 ~~~n~~~~FY~d~~~FRp~R 211 (212)
T PF11227_consen 192 WPDNEDPAFYDDTDVFRPGR 211 (212)
T ss_pred CCCCCCcccccCccccCCCC
Confidence 34488999999999999988
No 45
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=28.87 E-value=20 Score=26.48 Aligned_cols=36 Identities=25% Similarity=0.491 Sum_probs=24.0
Q ss_pred CCCCCCCcCCCCCCcCccCCCCceeccCCCCCCCccHH
Q 037793 104 CKFLPERFLTTHKDIDLRGQNFELIPFGSGRRICPGIS 141 (198)
Q Consensus 104 ~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~ 141 (198)
.+|||++|=.-- -.......+.+-|..|+-.|-|..
T Consensus 35 aeYnP~qFpGlv--~Rl~ePk~a~LIF~SGK~VcTGaK 70 (185)
T COG2101 35 AEYNPEQFPGLV--YRLEEPKTAALIFRSGKVVCTGAK 70 (185)
T ss_pred CccCHhHCCeeE--EEecCCcceEEEEecCcEEEeccC
Confidence 468999985211 011223457899999999999864
No 46
>KOG3302 consensus TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=28.78 E-value=20 Score=26.85 Aligned_cols=34 Identities=26% Similarity=0.611 Sum_probs=22.1
Q ss_pred CCCCCCCcCCCCCCcCccCCCCceeccCCCCCCCcc
Q 037793 104 CKFLPERFLTTHKDIDLRGQNFELIPFGSGRRICPG 139 (198)
Q Consensus 104 ~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G 139 (198)
.+|+|.||..--. ......-.-.-|++|+-.|-|
T Consensus 50 ~ey~Pk~~~aVim--rir~P~~ta~I~ssGKi~ctg 83 (200)
T KOG3302|consen 50 AEYNPKRFAAVIM--RIRSPRTTALIFSSGKIVCTG 83 (200)
T ss_pred cccCcccccEEEE--EEcCCceEEEEecCCcEEEec
Confidence 5799999863210 111123346789999999996
No 47
>PF14483 Cut8_M: Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=28.65 E-value=78 Score=16.95 Aligned_cols=20 Identities=10% Similarity=0.130 Sum_probs=12.6
Q ss_pred HHHHHHHHH-hCHHHHHHHHH
Q 037793 5 LTWAISLLL-NNRDALKKAQD 24 (198)
Q Consensus 5 l~w~l~~l~-~~p~~~~~l~~ 24 (198)
+.-.+..++ +||++++.++.
T Consensus 15 L~~lL~~l~~~HPei~~~i~~ 35 (38)
T PF14483_consen 15 LQSLLQSLCERHPEIQQEIRS 35 (38)
T ss_dssp HHHHHHHHHHHSTHHHHHHHT
T ss_pred HHHHHHHHHHhChhHHHHHHh
Confidence 444455554 88888877653
No 48
>cd04518 TBP_archaea archaeal TATA box binding protein (TBP): TBPs are transcription factors present in archaea and eukaryotes, that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA.
Probab=25.45 E-value=20 Score=26.47 Aligned_cols=55 Identities=18% Similarity=0.394 Sum_probs=31.7
Q ss_pred CCCCCCCcCCCCCCcCccCCCCceeccCCCCCCCccH-H--HHHHHHHHHHHHHhHhceee
Q 037793 104 CKFLPERFLTTHKDIDLRGQNFELIPFGSGRRICPGI-S--FAFQVMPLILASLLHGFDLA 161 (198)
Q Consensus 104 ~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~-~--lA~~e~~~~l~~ll~~f~~~ 161 (198)
.+|+|+||-.-- .......-..+-|+.|+=.|.|. . -|..-+. -++.+|++..+.
T Consensus 29 ~eY~P~~fpgli--~Rl~~Pk~t~lIF~SGKiv~tGaks~~~a~~a~~-~~~~~L~~~g~~ 86 (174)
T cd04518 29 AEYNPDQFPGLV--YRLEDPKIAALIFRSGKMVCTGAKSVEDLHRAVK-EIIKKLKDYGIK 86 (174)
T ss_pred cEECCCcCcEEE--EEccCCcEEEEEECCCeEEEEccCCHHHHHHHHH-HHHHHHHhcCCC
Confidence 579999985311 01122345788999999999976 2 2222222 234445665544
No 49
>cd04516 TBP_eukaryotes eukaryotic TATA box binding protein (TBP): Present in archaea and eukaryotes, TBPs are transcription factors that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA.
Probab=24.90 E-value=43 Score=24.70 Aligned_cols=57 Identities=19% Similarity=0.377 Sum_probs=32.6
Q ss_pred CCCCCCCcCCCCCCcCccCCCCceeccCCCCCCCcc-HHHHHHH-HHHHHHHHhHhceeec
Q 037793 104 CKFLPERFLTTHKDIDLRGQNFELIPFGSGRRICPG-ISFAFQV-MPLILASLLHGFDLAT 162 (198)
Q Consensus 104 ~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G-~~lA~~e-~~~~l~~ll~~f~~~~ 162 (198)
.+|+|++|-.-- ..........+-|+.|+=.|-| +.-.... ..--++.+|++..+..
T Consensus 29 ~eYePe~fpgli--~Rl~~Pk~t~lIF~SGKiviTGaks~e~a~~a~~~i~~~L~~~g~~~ 87 (174)
T cd04516 29 AEYNPKRFAAVI--MRIREPKTTALIFSSGKMVCTGAKSEDDSKLAARKYARIIQKLGFPA 87 (174)
T ss_pred CEECCccCcEEE--EEeCCCcEEEEEECCCeEEEEecCCHHHHHHHHHHHHHHHHHcCCCC
Confidence 679999985211 0111233457899999999998 3332222 2233445666666543
No 50
>PF12444 Sox_N: Sox developmental protein N terminal ; InterPro: IPR022151 This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes.
Probab=23.40 E-value=54 Score=21.11 Aligned_cols=19 Identities=16% Similarity=0.303 Sum_probs=16.1
Q ss_pred HHHHHHHHHhHhceeecCC
Q 037793 146 VMPLILASLLHGFDLATPL 164 (198)
Q Consensus 146 e~~~~l~~ll~~f~~~~~~ 164 (198)
-|+-++..+|+-|||.++.
T Consensus 61 ~IrdAVsqVLkGYDWtLVP 79 (84)
T PF12444_consen 61 CIRDAVSQVLKGYDWTLVP 79 (84)
T ss_pred HHHHHHHHHhccCCceeee
Confidence 3678899999999998864
No 51
>PF14129 DUF4296: Domain of unknown function (DUF4296)
Probab=23.28 E-value=2.1e+02 Score=18.18 Aligned_cols=31 Identities=10% Similarity=0.095 Sum_probs=23.3
Q ss_pred ChhHHHHHHHHHHhCHHHHHHHHHHHhHhhC
Q 037793 1 PLTTLTWAISLLLNNRDALKKAQDELNIHVG 31 (198)
Q Consensus 1 t~~~l~w~l~~l~~~p~~~~~l~~Ei~~~~~ 31 (198)
|++...-.+.+-++||+...++.+.+...+.
T Consensus 49 ds~~f~~S~~YY~~~p~~~~~Iy~~V~~rL~ 79 (87)
T PF14129_consen 49 DSAQFDSSMVYYSRNPEEYEKIYDKVIERLE 79 (87)
T ss_pred CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 3455566677778999999999998876553
No 52
>PLN00062 TATA-box-binding protein; Provisional
Probab=21.40 E-value=73 Score=23.65 Aligned_cols=55 Identities=20% Similarity=0.391 Sum_probs=32.8
Q ss_pred CCCCCCCcCCCCCCcCccCCCCceeccCCCCCCCccH-HHHHHH-HHHHHHHHhHhcee
Q 037793 104 CKFLPERFLTTHKDIDLRGQNFELIPFGSGRRICPGI-SFAFQV-MPLILASLLHGFDL 160 (198)
Q Consensus 104 ~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~-~lA~~e-~~~~l~~ll~~f~~ 160 (198)
.+|+|++|-.-- .......-..+-|+.|+=.|-|. .-.... ..--++.+|++..+
T Consensus 29 ~eYePe~fpgli--~Rl~~Pk~t~lIF~SGKiviTGaks~e~a~~a~~~~~~~L~~lg~ 85 (179)
T PLN00062 29 AEYNPKRFAAVI--MRIREPKTTALIFASGKMVCTGAKSEHDSKLAARKYARIIQKLGF 85 (179)
T ss_pred CEECCccCcEEE--EEeCCCcEEEEEECCCeEEEEecCCHHHHHHHHHHHHHHHHHcCC
Confidence 579999984211 01112334689999999999984 333332 23344566766665
No 53
>cd00652 TBP_TLF TATA box binding protein (TBP): Present in archaea and eukaryotes, TBPs are transcription factors that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA. New members of the TBP family, called TBP-like proteins (TBLP, TLF, TLP) or TBP-related factors (TRF1, TRF2,TRP), are similar to the core domain of TBPs, with identical or chemically similar amino acids at many
Probab=21.03 E-value=83 Score=23.17 Aligned_cols=57 Identities=21% Similarity=0.305 Sum_probs=33.1
Q ss_pred CCCCCCCcCCCCCCcCccCCCCceeccCCCCCCCccH-HHHHHH-HHHHHHHHhHhceeec
Q 037793 104 CKFLPERFLTTHKDIDLRGQNFELIPFGSGRRICPGI-SFAFQV-MPLILASLLHGFDLAT 162 (198)
Q Consensus 104 ~~f~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~-~lA~~e-~~~~l~~ll~~f~~~~ 162 (198)
.+|+|+||-.-- .......-..+-|+.|+=.|-|. ...... ..--++.+|+++.+..
T Consensus 29 ~~YePe~fpgli--~R~~~P~~t~lIf~sGKivitGaks~~~~~~a~~~~~~~L~~~g~~~ 87 (174)
T cd00652 29 AEYNPKRFPGVI--MRLREPKTTALIFSSGKMVITGAKSEEDAKLAARKYARILQKLGFPV 87 (174)
T ss_pred cEECCCccceEE--EEcCCCcEEEEEECCCEEEEEecCCHHHHHHHHHHHHHHHHHcCCCc
Confidence 578999985311 01112345688999999999983 333222 2233445566666544
No 54
>TIGR02115 potass_kdpF K+-transporting ATPase, KdpF subunit. This model describes a very small integral membrane peptide KdpF, a subunit of the K(+)-translocating Kdp complex. It is found upstream of the KdpA subunit (TIGR00680). Because of its very small size and highly hydrophobic character, it is sometimes missed in genome annotation.
Probab=20.91 E-value=23 Score=17.35 Aligned_cols=6 Identities=67% Similarity=1.259 Sum_probs=3.1
Q ss_pred CCCCCc
Q 037793 106 FLPERF 111 (198)
Q Consensus 106 f~P~R~ 111 (198)
++||||
T Consensus 19 l~PErF 24 (26)
T TIGR02115 19 LRPERF 24 (26)
T ss_pred hCHHhc
Confidence 345555
No 55
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=20.32 E-value=83 Score=26.69 Aligned_cols=20 Identities=25% Similarity=0.443 Sum_probs=15.9
Q ss_pred cccceecCeEeCCCCEEEEe
Q 037793 70 MEDCTISGYHVPAGTQLFVN 89 (198)
Q Consensus 70 ~~d~~~~g~~ip~g~~v~~~ 89 (198)
.+|+.++|..|||||.|.-.
T Consensus 279 le~~~v~~~~ipkgt~l~g~ 298 (410)
T TIGR03779 279 LEPIQAGDLVIPKGTVLYGT 298 (410)
T ss_pred cCceeeCCEEecCCCEEEEE
Confidence 45678889999999988644
No 56
>PF02663 FmdE: FmdE, Molybdenum formylmethanofuran dehydrogenase operon ; InterPro: IPR003814 Formylmethanofuran dehydrogenases (1.2.99.5 from EC) is found in methanogenic and sulphate-reducing archaea. The enzyme contains molybdenum or tungsten, a molybdopterin guanine dinuceotide cofactor (MGD) and iron-sulphur clusters []. It catalyses the reversible reduction of CO2 and methanofuran via N-carboxymethanofuran (carbamate) to N-formylmethanofuran, the first and second steps in methanogenesis from CO2 [, ]. This reaction is important for the reduction of CO2 to methane, in autotrophic CO2 fixation, and in CO2 formation from reduced C1 units []. The synthesis of formylmethanofuran is crucial for the energy metabolism of archaea. Methanogenic archaea derives the energy for autrophic growth from the reduction of CO2 with molecular hydrogen as the electron donor []. The process of methanogenesis consists of a series of reduction reactions at which the one-carbon unit derived from CO2 is bound to C1 carriers. There are two isoenzymes of formylmethanofuran dehydrogenase: a tungsten-containing isoenzyme (Fwd) and a molybdenum-containing isoenzyme (Fmd). The tungsten isoenzyme is constitutively transcribed, whereas transcription of the molybdenum operon is induced by molybdate []. The archaea Methanobacterium thermoautotrophicum contains a 4-subunit (FwdA, FwdB, FwdC, FwdD) tungsten formylmethanofuran dehydrogenase and a 3-subunit (FmdA, FmdB, FmdC) molybdenum formylmethanofuran dehydrogenase []. This entry represents subunit E of formylmethanofuran dehydrogenase enyzmes. The enzyme from Methanosarcina barkeri is a molybdenum iron-sulphur protein involved in methanogenesis. Subunit E protein is co-expressed with the enzyme but fails to co-purify and thus its function is unknown [].; PDB: 2GVI_A 3D00_A 2GLZ_A.
Probab=20.25 E-value=98 Score=21.36 Aligned_cols=22 Identities=23% Similarity=0.655 Sum_probs=16.6
Q ss_pred CCCccHHHHHHHHHHHHHHHhH
Q 037793 135 RICPGISFAFQVMPLILASLLH 156 (198)
Q Consensus 135 r~C~G~~lA~~e~~~~l~~ll~ 156 (198)
|.|||..++....+.++..+--
T Consensus 5 H~Cpgl~~G~r~~~~a~~~l~~ 26 (131)
T PF02663_consen 5 HLCPGLALGYRMAKYALEELGI 26 (131)
T ss_dssp S--HHHHHHHHHHHHHHHHHTS
T ss_pred CcCccHHHHHHHHHHHHHHcCC
Confidence 7999999999999888777643
Done!