BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037794
(293 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LRR5|DRL21_ARATH Putative disease resistance protein At3g14460 OS=Arabidopsis thaliana
GN=At3g14460 PE=3 SV=1
Length = 1424
Score = 40.0 bits (92), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 21/152 (13%)
Query: 36 FNELKFLELDDLPRLTSFCL-ENYTLEFPSLERVFVTRCPNMKTFSQGIVSTPKLHEVQV 94
F +L+ L + D +F + + +LE + + CPN++TF QG + TPKL + +
Sbjct: 1187 FPKLRSLSIRDCESFKTFSIHAGLGDDRIALESLEIRDCPNLETFPQGGLPTPKLSSMLL 1246
Query: 95 SKKEEDELHHWEGNKLNSTIQKRYEEMIGFRDIERLQLSHFPRLKEIWHGQALPVSFFNN 154
S ++ +Q E++ G + L + P ++ I G F +N
Sbjct: 1247 SNCKK--------------LQALPEKLFGLTSLLSLFIIKCPEIETIPGG-----GFPSN 1287
Query: 155 LFKLVVDDCANMSSAIPANLLRCLSNLRWLEV 186
L L + C ++ I LR L NLR LE+
Sbjct: 1288 LRTLCISLCDKLTPRIEWG-LRDLENLRNLEI 1318
Score = 35.0 bits (79), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 93/249 (37%), Gaps = 56/249 (22%)
Query: 48 PRLTSFCLENYTLEFPSLERVFVTRCPNMKTFSQGIVSTPKLHEVQVSKKEEDELHHWEG 107
P + S Y + PS +++R +V PK +E + +H G
Sbjct: 999 PAVISARYSGYISDIPSTLSPYMSRT--------SLVPDPK-NEGSILPGSSSYQYHQYG 1049
Query: 108 NKLNSTIQKRYEEMI--GFRDIERLQLSHFPRLKEIWHGQALPVSFFNNLFKLVVDDCAN 165
K +S R E I D + + + ++ +I H LP NL L +D C
Sbjct: 1050 IK-SSVPSPRSSEAIKPSQYDDDETDMEYL-KVTDISHLMELP----QNLQSLHIDSCDG 1103
Query: 166 MSSAIPANLLRCLSNLRWLEVRNCDSLE-----------EVLHL---------EELNADK 205
++S +P NL NL L + C SLE + L++ E L +
Sbjct: 1104 LTS-LPENLTESYPNLHELLIIACHSLESFPGSHPPTTLKTLYIRDCKKLNFTESLQPTR 1162
Query: 206 EH-------IGP-----------LFPRLFILRLIDLPKLKRFCNFTGNIIEMPMLWSLTI 247
+ IG LFP+L L + D K F G + L SL I
Sbjct: 1163 SYSQLEYLFIGSSCSNLVNFPLSLFPKLRSLSIRDCESFKTFSIHAGLGDDRIALESLEI 1222
Query: 248 ENCPDMETF 256
+CP++ETF
Sbjct: 1223 RDCPNLETF 1231
Score = 32.0 bits (71), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 34 IAFNELKFLELDDLPRLTSF-CLENYTLEFPSLERVFVTRCPNM-KTFSQGIVSTPKLHE 91
+ F L+ L+ +PR + C E FP L+++ + RCP++ K F +G+ P E
Sbjct: 837 VPFQSLQILKFYGMPRWDEWICPELEDGIFPCLQKLIIQRCPSLRKKFPEGL---PSSTE 893
Query: 92 VQVS 95
V +S
Sbjct: 894 VTIS 897
>sp|O82484|DRL23_ARATH Putative disease resistance protein At4g10780 OS=Arabidopsis
thaliana GN=At4g10780 PE=2 SV=1
Length = 892
Score = 38.9 bits (89), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 11/82 (13%)
Query: 4 PNSLVNLNVSYCEKIEEIIGH-----VGEEAKENR---IAFNELKFLELDDLPRLTSFCL 55
PN + L + E+++E+I H V EE ++ I F +L+ L L LP L S
Sbjct: 764 PN-ITYLMIEQLEQLQELISHAKATGVTEEEQQQLHKIIPFQKLQILHLSSLPELKSIYW 822
Query: 56 ENYTLEFPSLERVFVTRCPNMK 77
+L FP L ++V RCP ++
Sbjct: 823 --ISLSFPCLSGIYVERCPKLR 842
>sp|Q9SI85|DRL14_ARATH Probable disease resistance protein At1g62630 OS=Arabidopsis
thaliana GN=At1g62630 PE=3 SV=2
Length = 893
Score = 38.5 bits (88), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 7 LVNLNVSYCEKIEEIIGHVGEEAKENR----IAFNELKFLELDDLPRLTSFCLENYTLEF 62
L +L+V + +E+II E+A E + F ELK+L LDDLP+L + + L F
Sbjct: 766 LRSLSVVDAKDLEDIINE--EKACEGEDSGIVPFPELKYLNLDDLPKLKN--IYRRPLPF 821
Query: 63 PSLERVFVTRCPNMKTF 79
LE++ + CPN++
Sbjct: 822 LCLEKITIGECPNLRKL 838
Score = 32.7 bits (73), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 180 NLRWLEVRNCDSLEEVLHLEELNADKEHIGPL-FPRLFILRLIDLPKLKRFCNFTGNIIE 238
LR L V + LE++++ EE + E G + FP L L L DLPKLK NI
Sbjct: 765 KLRSLSVVDAKDLEDIIN-EEKACEGEDSGIVPFPELKYLNLDDLPKLK-------NIYR 816
Query: 239 MPM----LWSLTIENCPDM 253
P+ L +TI CP++
Sbjct: 817 RPLPFLCLEKITIGECPNL 835
>sp|Q9LVT3|DRL38_ARATH Probable disease resistance protein At5g47260 OS=Arabidopsis
thaliana GN=At5g47260 PE=3 SV=2
Length = 948
Score = 38.5 bits (88), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 7 LVNLNVSYCEKIEEIIGHVGEEAKENRIA---FNELKFLELDDLPRLTSFCLENYTLEFP 63
L L+VS C ++EE+I AK + F L L LD LP+L S L FP
Sbjct: 746 LGELSVSECPQMEEVISKDKAMAKLGNTSEQPFQNLTKLVLDGLPKLESIYWT--PLPFP 803
Query: 64 SLERVFVTRCPNMK 77
LE + + RCP ++
Sbjct: 804 VLEYLVIRRCPELR 817
>sp|Q8RXS5|DRL40_ARATH Probable disease resistance protein At5g63020 OS=Arabidopsis
thaliana GN=At5g63020 PE=2 SV=2
Length = 888
Score = 35.8 bits (81), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Query: 4 PNSLVNLNVSYCEKIEEIIGHVGEEAKENRIAFNELKFLELDDLPRLTSFCLENYTLEFP 63
PN L L V ++E+I E ++N I F ELK L L+++ L + L FP
Sbjct: 762 PN-LTVLRVISASDLKEVINKEKAE-QQNLIPFQELKELRLENVQMLKH--IHRGPLPFP 817
Query: 64 SLERVFVTRCPNMKTFSQGIVSTPKLHEVQVSKKEEDELHHWE 106
L+++ V C ++ S P+ V + K+ E+ WE
Sbjct: 818 CLQKILVNGCSELRKLPLNFTSVPRGDLVIEAHKKWIEILEWE 860
>sp|P0CB16|DRL25_ARATH Putative disease resistance protein At4g19050 OS=Arabidopsis thaliana
GN=At4g19050 PE=3 SV=2
Length = 1201
Score = 35.4 bits (80), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 12/76 (15%)
Query: 3 IPNSLVNLNVSYCEKIEEIIGHVGEEAKENRIAFNELKFLELDDLPRLTSFCLENYTLEF 62
IP++L L V +C+K+E + E K ++ +L+ L L DLP L+ F
Sbjct: 1096 IPDNLEILRVKFCDKLERLF-----EVKAGELS--KLRKLHLLDLPVLSVL-----GANF 1143
Query: 63 PSLERVFVTRCPNMKT 78
P+LE+ + +CP +K
Sbjct: 1144 PNLEKCTIEKCPKLKA 1159
>sp|Q9LRR4|R13L1_ARATH Putative disease resistance RPP13-like protein 1 OS=Arabidopsis
thaliana GN=RPPL1 PE=3 SV=1
Length = 1054
Score = 35.4 bits (80), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 31/165 (18%)
Query: 36 FNELKFLELDDLPRLTSFCLENYTLE--FPSLERVFVTRCP----NMKTFSQGIVSTPKL 89
F L+ L D+LP + T FPSL+++F+ RCP + TF ++S +
Sbjct: 848 FRSLETLRFDNLPDWQEWLDVRVTRGDLFPSLKKLFILRCPELTGTLPTFLPSLISL-HI 906
Query: 90 HEVQVSKKEEDELHHWEGNKLNSTIQKRYEEMIGFRDIERLQLSHFPRLKEIWHGQALPV 149
++ + + D + N +I+ + ++ F P+
Sbjct: 907 YKCGLLDFQPDHHEYSYRNLQTLSIKSSCDTLVKF-----------------------PL 943
Query: 150 SFFNNLFKLVVDDCANMSSAIPAN-LLRCLSNLRWLEVRNCDSLE 193
+ F NL KL VD C ++ S +N LR + LR L + +C +L+
Sbjct: 944 NHFANLDKLEVDQCTSLYSLELSNEHLRGPNALRNLRINDCQNLQ 988
>sp|Q492T2|KDSB_BLOPB 3-deoxy-manno-octulosonate cytidylyltransferase OS=Blochmannia
pennsylvanicus (strain BPEN) GN=kdsB PE=3 SV=1
Length = 262
Score = 35.0 bits (79), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 25/37 (67%)
Query: 131 QLSHFPRLKEIWHGQALPVSFFNNLFKLVVDDCANMS 167
Q+ H +L+ +WHG+A+ VS +++F + VD ++S
Sbjct: 210 QIEHLEQLRVLWHGEAIHVSVIDDVFNISVDTPESLS 246
>sp|O23317|DRL24_ARATH Probable disease resistance protein At4g14610 OS=Arabidopsis
thaliana GN=At4g14610 PE=3 SV=1
Length = 719
Score = 35.0 bits (79), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 150 SFFNNLFKLVVDDCANMSSAIPANLLRCLSNLRWLEVRNCDSLEEVLHLEELNADKEHIG 209
S F++L K+V+ C + L NL +L+ R + LE+++ E+ + +
Sbjct: 569 SCFSSLSKVVIGQCDGLKEL---TWLLFAPNLTYLDARFAEQLEDIISEEKAASVTDENA 625
Query: 210 PL---FPRLFILRLIDLPKLKRFCNFTGNIIEMPMLWSLTI-ENCPDMETFISNS 260
+ F +L L L DLPKLK + + + P L L + E+CP ++ NS
Sbjct: 626 SIIIPFQKLECLSLSDLPKLK---SIYWSPLSFPRLSELAVQEHCPKLKKLPLNS 677
>sp|Q42484|RPS2_ARATH Disease resistance protein RPS2 OS=Arabidopsis thaliana GN=RPS2
PE=1 SV=1
Length = 909
Score = 34.7 bits (78), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 15 CEKIEEIIGHVGEEAKENRIAFNELKFLELDDLPRLTSFCLENYTLEFPSLERVFVTRCP 74
C +IEE+I + E+ F LK L DLP L S ++ F +E + +T CP
Sbjct: 805 CREIEELISEHESPSVEDPTLFPSLKTLRTRDLPELNSILPSRFS--FQKVETLVITNCP 862
Query: 75 NMK 77
+K
Sbjct: 863 RVK 865
>sp|Q723X5|INLI_LISMF Internalin-I OS=Listeria monocytogenes serotype 4b (strain F2365)
GN=inlI PE=3 SV=1
Length = 1775
Score = 34.7 bits (78), Expect = 0.95, Method: Composition-based stats.
Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 34/172 (19%)
Query: 6 SLVNLNVSYCEKIEEIIGHVGEEA-KENRIAFNELKFLELDD-----LPRLTSFCLENYT 59
+L LNVS + +E+I KE +K LELD+ LP L +F L+
Sbjct: 225 NLQELNVSANKALEDISQVAALPVLKEISAQGCNIKTLELDNPAGAILPELETFYLQEND 284
Query: 60 L-------EFPSLERVFVTRCPNMKTFSQGIVSTPKLHEVQVSKKEEDELHHWEGNKLNS 112
L + P L+ +++ ++K+ + + KL + S N
Sbjct: 285 LTDLTSLAKLPKLKNLYIKGNASLKSLAT-LKGATKLQLIDAS---------------NC 328
Query: 113 TIQKRYEEMIGFRDIERLQLSHFPRLKEIWHGQALPVSFFNNLFKLVVDDCA 164
T + ++ G ++E +QLS +LKEI + LP NL + D CA
Sbjct: 329 TDLETLGDISGLSELEMIQLSGCSKLKEITSLKDLP-----NLVNITADSCA 375
>sp|O74783|POF2_SCHPO SCF E3 ubiquitin ligase complex F-box protein pof2
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pof2 PE=1 SV=1
Length = 463
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 74/174 (42%), Gaps = 28/174 (16%)
Query: 32 NRIAFNELKFLELDDLPRLTSFCLENYTLEFPSL-ERVFVTRCPNMKTFSQGIVSTPKLH 90
N + FN L +LE D+L ++ C P+L E+V + F
Sbjct: 5 NEVCFNILSYLEADELRCKSTVCTSWRNFIIPTLWEKVVFQNEAQLNNF---------FD 55
Query: 91 EVQVSKKEEDELHHWEGNKLNSTIQKRYEE------MIGFRDIERLQLSHFPRLKEIWHG 144
+Q SK + KLN + +++ M I RL LS R+ E G
Sbjct: 56 TLQYSKDVSYYFRYLR--KLNCSRVRKFLTDKHLMLMTLATGISRLNLSGCTRISEPLIG 113
Query: 145 QALPVSFFNNLFKLVVDDCANMSSAIPANLLRCLS----NLRWLEVRNCDSLEE 194
+ L + NL LV + +N+ S +PAN+L +S NL+ L + NC +E+
Sbjct: 114 KLL----YQNL-NLVTINFSNIFS-LPANILEYISDNCPNLKALNIGNCGLVED 161
>sp|P60838|DRL1_ARATH Probable disease resistance protein At1g12280 OS=Arabidopsis
thaliana GN=At1g12280 PE=3 SV=1
Length = 894
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
Query: 4 PNSLVNLNVSYCEKIEEIIGHVGEEAKENRIAFNELKFLELDDLPRLTSFCLENYTLEFP 63
PN L +L V E +E II I F +L+ L L +L L S + L FP
Sbjct: 768 PN-LTSLEVLDSELVEGIINQEKAMTMSGIIPFQKLESLRLHNLAMLRSIYWQ--PLSFP 824
Query: 64 SLERVFVTRCPNMKTFSQGIVSTPKLHEVQVSKKEEDELHHWE 106
L+ + +T+CP ++ + E+ + +EE+ L E
Sbjct: 825 CLKTIHITKCPELRKLPLDSEIAIRDEELVIKYQEEEWLERVE 867
>sp|P23799|ESAG8_TRYBB Putative adenylate cyclase regulatory protein OS=Trypanosoma brucei
brucei GN=ESAG8 PE=2 SV=1
Length = 630
Score = 32.7 bits (73), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 13/91 (14%)
Query: 123 GFRDIERLQLSHFPRLKEIWHGQALPVSFFNNLFKLVVDDCANMSSAIPANLLRCLSNLR 182
G R +E+L LS + + + F+NL +L + C + SA+ +L+ L NL+
Sbjct: 275 GVRSLEKLSLSGCWNVTKGLE----ELCKFSNLRELDISGCLVLGSAV---VLKNLINLK 327
Query: 183 WLEVRNC------DSLEEVLHLEELNADKEH 207
L V NC + LE +++LE+LN H
Sbjct: 328 VLSVSNCKNFKDLNGLERLVNLEKLNLSGCH 358
>sp|O22727|DRL16_ARATH Probable disease resistance protein At1g61190 OS=Arabidopsis
thaliana GN=At1g61190 PE=3 SV=1
Length = 967
Score = 32.3 bits (72), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 20/113 (17%)
Query: 4 PNSLVNLNVSYCEKIEEIIGHVGEEAKENRI-------AFNELKFLELDDLPRLTSFCLE 56
PN LVNL++ ++ EII KE I F +L+ L L LP+L S
Sbjct: 765 PN-LVNLDIRDSREVGEIIN------KEKAINLTSIITPFQKLERLFLYGLPKLESIYWS 817
Query: 57 NYTLEFPSLERVFVTRCPNMKTFSQGIVSTPKLHEVQVSK---KEEDELHHWE 106
L FP L + V CP ++ S P + E ++ ++E+EL WE
Sbjct: 818 --PLPFPLLSNIVVKYCPKLRKLPLNATSVPLVEEFEIRMDPPEQENEL-EWE 867
>sp|Q9C8K0|DRL5_ARATH Probable disease resistance protein At1g51480 OS=Arabidopsis
thaliana GN=At1g51480 PE=2 SV=2
Length = 854
Score = 32.3 bits (72), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 4 PNSLVNLNVSYCEKIEEIIGHVGEEAKENRIAFNELKFLELDDLPRLTSFCLENYTLEFP 63
+L +L+V + +IEEII + IAF +L+ L + LP L C TL P
Sbjct: 771 AQNLKSLHVGFSPEIEEIINKEKGSSITKEIAFGKLESLVIYKLPELKEICWNYRTL--P 828
Query: 64 SLERVFVTRCPNM 76
+ V CP +
Sbjct: 829 NSRYFDVKDCPKL 841
>sp|Q8R687|HEM1_FUSNN Glutamyl-tRNA reductase OS=Fusobacterium nucleatum subsp. nucleatum
(strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131)
GN=hemA PE=3 SV=1
Length = 329
Score = 32.3 bits (72), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 23/37 (62%)
Query: 169 AIPANLLRCLSNLRWLEVRNCDSLEEVLHLEELNADK 205
A+P ++ L+N + +E+ N D + EV HL +N DK
Sbjct: 269 AVPRDVDERLANFKNIEIYNLDDIWEVYHLNSMNRDK 305
>sp|A4IHD2|ARIP4_XENTR Helicase ARIP4 OS=Xenopus tropicalis GN=rad54l2 PE=2 SV=1
Length = 1396
Score = 32.0 bits (71), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 75 NMKTFSQGIVSTPKLHEVQVSKKEEDELHHWEGNKLNSTIQKRYEEMIGF 124
N+ QGI PKL + + K +D+ HW NK N Q Y GF
Sbjct: 1194 NLGLHHQGINPAPKL-QPRKRKDPQDQSSHWPSNKRNPYSQLSYPNTGGF 1242
>sp|O81825|DRL28_ARATH Probable disease resistance protein At4g27220 OS=Arabidopsis
thaliana GN=At4g27220 PE=2 SV=1
Length = 919
Score = 32.0 bits (71), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Query: 158 LVVDDCANMSSAIPANLLR-CLSNLRWLEVRNCDSLEEVLHLEELNADKEHIGPLFPRLF 216
L V C + +L L NL+ ++V +C LEE+ + + D L P+L
Sbjct: 800 LQVSGCRQLKRLFSDQILAGTLPNLQEIKVVSCLRLEELFNFSSVPVDF-CAESLLPKLT 858
Query: 217 ILRLIDLPKLKRFCNFTGNIIEMPMLWSLTIENCPDMETF 256
+++L LP+L+ CN + + + L L +E+C ++
Sbjct: 859 VIKLKYLPQLRSLCN---DRVVLESLEHLEVESCESLKNL 895
>sp|Q5I0I4|AT5SL_RAT ATP synthase subunit s-like protein OS=Rattus norvegicus GN=Atp5sl
PE=2 SV=1
Length = 254
Score = 32.0 bits (71), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 5 NSLVNLNVSYCEKIEEIIGHVGEEAKENRIAFNELKFLELDDLPRLTSFCLENYTLEFPS 64
+S+ L E ++ + + N + EL+FL L P L +CL L S
Sbjct: 113 HSIAELQKVPVEAVDASGCAINYQGLSNLLPLKELQFLSLQRCPNLDDWCLSRLYLLAGS 172
Query: 65 LERVFVTRCPNM 76
L+ + + CP +
Sbjct: 173 LQELSLAGCPRI 184
>sp|P26337|ESA8C_TRYEQ Putative adenylate cyclase regulatory protein OS=Trypanosoma
equiperdum GN=ESAG8C PE=2 SV=1
Length = 630
Score = 32.0 bits (71), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 13/91 (14%)
Query: 123 GFRDIERLQLSHFPRLKEIWHGQALPVSFFNNLFKLVVDDCANMSSAIPANLLRCLSNLR 182
G R +E+L LS + + + F+NL +L + C + SA+ +L+ L NL+
Sbjct: 275 GMRSLEKLSLSGCWNVTKGLE----ELCKFSNLRELDISGCLVLGSAV---VLKNLINLK 327
Query: 183 WLEVRNC------DSLEEVLHLEELNADKEH 207
L V NC + LE +++L++LN H
Sbjct: 328 VLSVSNCKNFKDLNGLERLVNLDKLNLSGCH 358
>sp|Q8YA32|INLI_LISMO Internalin-I OS=Listeria monocytogenes serovar 1/2a (strain ATCC
BAA-679 / EGD-e) GN=inlI PE=4 SV=1
Length = 1778
Score = 31.6 bits (70), Expect = 6.5, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 27/127 (21%)
Query: 38 ELKFLELDDLPRLTSFCLENYTLEFPSLERVFVTRCPNMKTFSQGIVSTPKLHEVQVSKK 97
E +L+ +DL LTS + P L+ +++ ++K+ + + KL + S
Sbjct: 279 ETFYLQENDLTNLTSLA------KLPKLKNLYIKGNASLKSL-ETLNGATKLQLIDAS-- 329
Query: 98 EEDELHHWEGNKLNSTIQKRYEEMIGFRDIERLQLSHFPRLKEIWHGQALPVSFFNNLFK 157
N T + ++ G ++E +QLS +LKEI + LP NL
Sbjct: 330 -------------NCTDLETLGDISGLSELEMIQLSGCSKLKEITSLKNLP-----NLVN 371
Query: 158 LVVDDCA 164
+ D CA
Sbjct: 372 ITADSCA 378
>sp|O64973|RPS5_ARATH Disease resistance protein RPS5 OS=Arabidopsis thaliana GN=RPS5
PE=1 SV=2
Length = 889
Score = 31.2 bits (69), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 10/83 (12%)
Query: 62 FPSLERVFVTRCPNMKTFSQGIVSTPKLH--EVQVSKKEEDELHHWEGNKLNSTIQKRYE 119
F +L RVF+ +C +K + ++ P L EV SK+ ED + + + ++TI
Sbjct: 744 FSNLSRVFIAKCHGLKDLTW-LLFAPNLTFLEVGFSKEVEDIISEEKAEEHSATI----- 797
Query: 120 EMIGFRDIERLQLSHFPRLKEIW 142
+ FR +E L L LK I+
Sbjct: 798 --VPFRKLETLHLFELRGLKRIY 818
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 111,808,219
Number of Sequences: 539616
Number of extensions: 4660806
Number of successful extensions: 10813
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 10759
Number of HSP's gapped (non-prelim): 97
length of query: 293
length of database: 191,569,459
effective HSP length: 116
effective length of query: 177
effective length of database: 128,974,003
effective search space: 22828398531
effective search space used: 22828398531
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)