Your job contains 1 sequence.
>037795
FVNNGDAVNQWNEINGRLEISTECAVNASTSNESTPEENWSLPFVKHSSILRAIEPMGVF
QKMPQKPHFNLLDGSKDMYLEGLVTGYMLTFANVVEQTSKLQVSDPTSIFNGMFEALLNL
ESHGFDVKTVHSCLSEMQSIKEKHEQLQEQLLEYECHILEQTSEQSKITVELDHVVKEIK
MLEESKAKLTSKNESEIAASKSKVDVGNENIQNAQLDFESVAVCLGD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 037795
(227 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2065165 - symbol:DUF5 "AT2G47220" species:3702... 214 8.3e-17 1
TAIR|locus:2200146 - symbol:DUF2 "DOMAIN OF UNKNOWN FUNCT... 183 3.2e-13 1
TAIR|locus:2172838 - symbol:DUF9 "DOMAIN OF UNKNOWN FUNCT... 177 7.2e-13 1
TAIR|locus:2172858 - symbol:DUF 10 "DOMAIN OF UNKNOWN FUN... 172 4.2e-12 1
TAIR|locus:2197985 - symbol:AT1G26540 species:3702 "Arabi... 167 2.1e-11 1
TAIR|locus:2014505 - symbol:ATDUF1 "DOMAIN OF UNKNOWN FUN... 162 6.8e-11 1
>TAIR|locus:2065165 [details] [associations]
symbol:DUF5 "AT2G47220" species:3702 "Arabidopsis
thaliana" [GO:0000175 "3'-5'-exoribonuclease activity"
evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0006396 "RNA processing"
evidence=ISS] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] GO:GO:0005634 GO:GO:0009570 EMBL:CP002685
InterPro:IPR020568 SUPFAM:SSF54211 InterPro:IPR007930 Pfam:PF05266
IPI:IPI00546959 RefSeq:NP_182244.2 UniGene:At.48604
ProteinModelPortal:F4IL21 SMR:F4IL21 PRIDE:F4IL21
EnsemblPlants:AT2G47220.1 GeneID:819335 KEGG:ath:AT2G47220
Uniprot:F4IL21
Length = 469
Score = 214 (80.4 bits), Expect = 8.3e-17, P = 8.3e-17
Identities = 58/202 (28%), Positives = 101/202 (50%)
Query: 28 ASTSNESTPEENWS--LPFVKHSSILRAIEPMGVFQKMPQKPHFNLLDGSKDMYLEGLVT 85
A +E T ++ + LPFVK S + + E M VF+++PQ PHF+ L +K+ + EG
Sbjct: 270 ADDDDEETKAKDATMVLPFVKKSPVWKIYESMEVFKRVPQSPHFSPLFEAKEDFREGFAL 329
Query: 86 GYMLTFANVVEQTSKLQVSDPTSIFNGMFEALLNLESHGFDVKTVHSCLSEMQSIKEKHX 145
G M+TF+ V+E+ L+ P N + ++ LE HGF V S ++++ ++K++
Sbjct: 330 GMMVTFSGVLEKVEDLKTDVPIRQLNSLKDSFTELEKHGFTVTAPLSRIAKLLALKDRQL 389
Query: 146 XXXXXXXXYECHILEQTSEQSKITVELDHVVKEIKMLEESKAKLTSKNESEIAASKSKVD 205
++ + +++S++ K E + E K+LE K K+ + E A K K D
Sbjct: 390 KILEELKVFDKEMKDESSKKHKAEQEFGEM--ERKILEV-KNKVLELQKQEAALEKQK-D 445
Query: 206 VGNENIQNAQLDFESVAVCLGD 227
E I + + V L D
Sbjct: 446 ATYEKICKMESRARDLGVELED 467
>TAIR|locus:2200146 [details] [associations]
symbol:DUF2 "DOMAIN OF UNKNOWN FUNCTION 724 2"
species:3702 "Arabidopsis thaliana" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0009855
"determination of bilateral symmetry" evidence=RCA] [GO:0009944
"polarity specification of adaxial/abaxial axis" evidence=RCA]
[GO:0010014 "meristem initiation" evidence=RCA] [GO:0010075
"regulation of meristem growth" evidence=RCA] INTERPRO:IPR008395
EMBL:CP002684 Pfam:PF05641 InterPro:IPR014002 SMART:SM00743
IPI:IPI00536326 RefSeq:NP_172609.1 UniGene:At.51568
ProteinModelPortal:F4I8W1 PRIDE:F4I8W1 EnsemblPlants:AT1G11420.1
GeneID:837684 KEGG:ath:AT1G11420 OMA:MESCAKD InterPro:IPR007930
Pfam:PF05266 Uniprot:F4I8W1
Length = 604
Score = 183 (69.5 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 54/198 (27%), Positives = 93/198 (46%)
Query: 12 NEINGRLEISTECAVNASTSNESTPEENWS------LPFVKHSSILRAIEPMGVFQKMPQ 65
N + +S++ N ++ S EEN + LPF K S + + E + VF+ +
Sbjct: 370 NSYINKTVLSSDRTPNVVKNSASNAEENHAKHTIMVLPFAKKSPVWKTYESLEVFKSVSH 429
Query: 66 KPHFNLLDGSKDMYLEGLVTGYMLTFANVVEQTSKLQVSDPTSIFNGMFEALLNLESHGF 125
HF+ L +K + EG G M+T+ ++E+ L+ P S N + ++ LE HGF
Sbjct: 430 SLHFSPLFETKQDFREGYAIGMMVTYFGLLEKFKDLEADVPVSQLNSLKDSFSELEKHGF 489
Query: 126 DVKTVHSCLSEMQSIKEKHXXXXXXXXXYECHILEQTSEQSKITVELDHVVKEIKMLEES 185
+V T S + ++ ++K++ ++ E T+E SK E D + E K+LE
Sbjct: 490 NVTTPLSRIDKLLALKDRQLYIMEELKGFD---KEMTNEFSKAKQEFDDM--EQKILEV- 543
Query: 186 KAKLTSKNESEIAASKSK 203
K K+ E A + K
Sbjct: 544 KHKIIELQRQEAALKEQK 561
Score = 165 (63.1 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 47/210 (22%), Positives = 99/210 (47%)
Query: 27 NASTSNESTPEEN-WSLPFVKHSSILRAIEPMGVFQKMPQKPHFNLLDGSKDMYLEGLVT 85
+AS + E+ + LPF K S + + E + VF+ + HF+ L +K + EG
Sbjct: 390 SASNAEENHAKHTIMVLPFAKKSPVWKTYESLEVFKSVSHSLHFSPLFETKQDFREGYAI 449
Query: 86 GYMLTFANVVEQTSKLQVSDPTSIFNGMFEALLNLESHGFDVKTVHSCLSEMQSIKEKHX 145
G M+T+ ++E+ L+ P S N + ++ LE HGF+V T S + ++ ++K++
Sbjct: 450 GMMVTYFGLLEKFKDLEADVPVSQLNSLKDSFSELEKHGFNVTTPLSRIDKLLALKDRQL 509
Query: 146 XXXXXXXXYECHILEQTSEQSKITVELDHVVKEIKM----LEESKAKLTSKNESE----- 196
++ + + S+ + +++ + E+K L+ +A L + E+E
Sbjct: 510 YIMEELKGFDKEMTNEFSKAKQEFDDMEQKILEVKHKIIELQRQEAALKEQKEAEKEQKD 569
Query: 197 -----IAASKSKVDVGNENIQNAQLDFESV 221
I +S N +++ + +FE++
Sbjct: 570 AAWKKICQMESCAKDLNVELEDVEFEFETI 599
>TAIR|locus:2172838 [details] [associations]
symbol:DUF9 "DOMAIN OF UNKNOWN FUNCTION 724 9"
species:3702 "Arabidopsis thaliana" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006302
"double-strand break repair" evidence=RCA] [GO:0006312 "mitotic
recombination" evidence=RCA] [GO:0007062 "sister chromatid
cohesion" evidence=RCA] [GO:0007129 "synapsis" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] INTERPRO:IPR008395 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AB005244 Pfam:PF05641
InterPro:IPR014002 SMART:SM00743 InterPro:IPR007930 Pfam:PF05266
HOGENOM:HOG000114080 ProtClustDB:CLSN2686298 IPI:IPI00548759
RefSeq:NP_197767.1 UniGene:At.30992 ProteinModelPortal:Q9FFA2
EnsemblPlants:AT5G23780.1 GeneID:832443 KEGG:ath:AT5G23780
TAIR:At5g23780 InParanoid:Q9FFA2 PhylomeDB:Q9FFA2
Genevestigator:Q9FFA2 Uniprot:Q9FFA2
Length = 426
Score = 177 (67.4 bits), Expect = 7.2e-13, P = 7.2e-13
Identities = 54/192 (28%), Positives = 92/192 (47%)
Query: 31 SNESTPEENWSLPFVKHSSILRAIEPMGVFQKMPQKPHFNLLDGSKDMYLEGLVTGYMLT 90
S+ S + +LPF K SI + +E + + +PQ PHF+ L +++ E G MLT
Sbjct: 245 SDASVEDTTMTLPFEKKLSIWKTLESV---ETVPQSPHFSPLVETREDCREMSAVGMMLT 301
Query: 91 FANVVEQTSKLQVSDPTSIFNGMFEALLNLESHGFDVKTVHSCLSEMQSIKEKHXXXXXX 150
F ++E+ LQ + S + LE HGF+VK S +S++ S++ K
Sbjct: 302 FPCLLEEVKSLQHDNSISSLISLSNNFCELEKHGFNVKAPQSRISKLLSLRGKQSMKMDE 361
Query: 151 XXXYECHILEQTSEQSKITVELDHVVKEIKMLEESKAKLTSKNESEIAASKSKVDVGNEN 210
E + T+E+ I +E + + E++ L E K EIA SKS +
Sbjct: 362 LKGAE----KVTAEKESIKIENERKILELQRLNEEVDK-------EIAQSKSCAAKIVQQ 410
Query: 211 IQNAQLDFESVA 222
+++ +L F++ A
Sbjct: 411 LEDVELQFQTTA 422
>TAIR|locus:2172858 [details] [associations]
symbol:DUF 10 "DOMAIN OF UNKNOWN FUNCTION 724 10"
species:3702 "Arabidopsis thaliana" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
INTERPRO:IPR008395 EMBL:CP002688 GenomeReviews:BA000015_GR
EMBL:AB005244 Pfam:PF05641 InterPro:IPR014002 SMART:SM00743
InterPro:IPR007930 Pfam:PF05266 IPI:IPI00521404 RefSeq:NP_197769.1
UniGene:At.54962 ProteinModelPortal:Q9FFA0 PRIDE:Q9FFA0
EnsemblPlants:AT5G23800.1 GeneID:832445 KEGG:ath:AT5G23800
TAIR:At5g23800 eggNOG:NOG319526 HOGENOM:HOG000114080
InParanoid:Q9FFA0 OMA:CIDIEIG PhylomeDB:Q9FFA0
ProtClustDB:CLSN2686298 Genevestigator:Q9FFA0 Uniprot:Q9FFA0
Length = 552
Score = 172 (65.6 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 52/192 (27%), Positives = 90/192 (46%)
Query: 31 SNESTPEENWSLPFVKHSSILRAIEPMGVFQKMPQKPHFNLLDGSKDMYLEGLVTGYMLT 90
S S E N + F K + + +E M VF+ +PQ PHF L ++ E L G MLT
Sbjct: 362 SGSSVEETN--ILFEKKLPVWKILESMEVFKTIPQSPHFRPLAEIREDSREMLAVGMMLT 419
Query: 91 FANVVEQTSKLQVSDPTSIFNGMFEALLNLESHGFDVKTVHSCLSEMQSIKEKHXXXXXX 150
F+ ++EQ LQ + S F + + LE HGF+ + ++++ +++
Sbjct: 420 FSCLLEQVKALQHDEARSSFISLSNSFAELEKHGFNAQVAQLRINKLLTLRGMQSRKMDE 479
Query: 151 XXXYECHILEQTSEQSKITVELDHVVKEIKMLEESKAKLTSKNESEIAASKSKVDVGNEN 210
+ + T+E+ + VE + + E++ L E AK EIA S S +
Sbjct: 480 LKGAK----KVTAEKESVKVENERKILELQRLNEEMAK-------EIAQSMSCEGKILQQ 528
Query: 211 IQNAQLDFESVA 222
+ N +L+F++ A
Sbjct: 529 LDNMKLEFQATA 540
>TAIR|locus:2197985 [details] [associations]
symbol:AT1G26540 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0005773 "vacuole" evidence=IDA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=RCA] [GO:0007267 "cell-cell signaling"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0010267 "production of ta-siRNAs involved in RNA
interference" evidence=RCA] [GO:0031047 "gene silencing by RNA"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0034968 "histone lysine methylation"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0048451 "petal formation"
evidence=RCA] [GO:0048453 "sepal formation" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
INTERPRO:IPR008395 EMBL:CP002684 EMBL:AC013427 GO:GO:0005773
Pfam:PF05641 InterPro:IPR014002 SMART:SM00743 InterPro:IPR007930
Pfam:PF05266 HOGENOM:HOG000114080 EMBL:AK117551 IPI:IPI00540262
PIR:D86392 RefSeq:NP_173976.1 UniGene:At.41229
ProteinModelPortal:Q9FZD9 PRIDE:Q9FZD9 ProMEX:Q9FZD9
EnsemblPlants:AT1G26540.1 GeneID:839194 KEGG:ath:AT1G26540
TAIR:At1g26540 InParanoid:Q9FZD9 OMA:WINIPTV PhylomeDB:Q9FZD9
ProtClustDB:CLSN2679655 Genevestigator:Q9FZD9 Uniprot:Q9FZD9
Length = 695
Score = 167 (63.8 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 50/182 (27%), Positives = 84/182 (46%)
Query: 43 PFVKHSSILRAIEPMGVFQKMPQKPHFN-LLDGSKDMYLEGLVTGYMLTFANVVEQTSKL 101
PF K+ + E ++ +PQ PHF+ LL+ +D+ E G M++F ++E+ KL
Sbjct: 509 PFTKNLPFWKTYEMEKGYKTVPQNPHFSPLLEFKEDIR-EWSAVGMMVSFYGLLEEVKKL 567
Query: 102 QVSDPTSIFNGMFEALLNLESHGFDVKTVHSCLSEMQSIKEKHXXXXXXXXXYECHILEQ 161
Q+ +S + LE HGFD+ T S ++++ S++ E I +
Sbjct: 568 QLDVSSSKLGSLSTCFAELEKHGFDIATPQSRINKVLSLQVGRAKKVEERKCLEKRIEAE 627
Query: 162 TSEQSKITVELDHVVKEIKMLEESKAKLTSKNESE-----IAASKSKVDVGNENIQNAQL 216
E K E+ V E KMLE + +K + E I KS + ++ I N +L
Sbjct: 628 EIEMQKFEHEMVEV--ERKMLELKRRAEVAKEKKEAADKMIVEMKSSAETIDQEIANVEL 685
Query: 217 DF 218
+F
Sbjct: 686 EF 687
>TAIR|locus:2014505 [details] [associations]
symbol:ATDUF1 "DOMAIN OF UNKNOWN FUNCTION 724 1"
species:3702 "Arabidopsis thaliana" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008150
"biological_process" evidence=ND] INTERPRO:IPR008395 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:AC005278 Pfam:PF05641
InterPro:IPR014002 SMART:SM00743 InterPro:IPR007930 Pfam:PF05266
HOGENOM:HOG000114080 ProtClustDB:CLSN2679655 IPI:IPI00521919
PIR:E86164 RefSeq:NP_171829.1 UniGene:At.42551
ProteinModelPortal:Q9ZVT1 EnsemblPlants:AT1G03300.1 GeneID:838627
KEGG:ath:AT1G03300 TAIR:At1g03300 eggNOG:NOG245760
InParanoid:Q9ZVT1 OMA:KDCEVEI PhylomeDB:Q9ZVT1
Genevestigator:Q9ZVT1 Uniprot:Q9ZVT1
Length = 670
Score = 162 (62.1 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 49/203 (24%), Positives = 99/203 (48%)
Query: 26 VNASTSN-ESTPEENWSL--PFVKHSSILRAIEPMGVFQKMPQKPHFNLLDGSKDMYLEG 82
VN+ ++ E TP ++ PF K ++ E +++ +PQ PHF+ L +K+ E
Sbjct: 464 VNSFAADAEETPAKSARTISPFAKKLPFWKSYETDELYKSLPQSPHFSPLFKAKEDIREW 523
Query: 83 LVTGYMLTFANVVEQTSKLQVSDPTSIFNGMFEALLNLESHGFDVKTVHSCLSEMQSIKE 142
G M+TF ++++ LQ+ D +S + + +L LE HGF+V S +S++ +++
Sbjct: 524 SAVGMMVTFYCLLKEVKDLQLDDSSSKLSSLSSSLAELEKHGFNVTDPLSRISKVLPLQD 583
Query: 143 KHXXXXXXXXXYECHILEQTSEQSKITVELDHVVKEIKMLEESKAKLTSKNESE-----I 197
K E I + E+ + E + I +E+ + L +K + E I
Sbjct: 584 KRAKKAEERKCLEKKIECEEIERKRFEEEFADFERII--IEKKRQALVAKEKKEAADKRI 641
Query: 198 AASKSKVDVGNENIQNAQLDFES 220
K+ + ++ I++ +L+F++
Sbjct: 642 GEMKTCAETIDQEIKDEELEFQT 664
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.127 0.354 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 227 218 0.00091 112 3 11 23 0.45 33
32 0.39 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 600 (64 KB)
Total size of DFA: 178 KB (2104 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.29u 0.14s 23.43t Elapsed: 00:00:02
Total cpu time: 23.29u 0.14s 23.43t Elapsed: 00:00:02
Start: Fri May 10 00:23:35 2013 End: Fri May 10 00:23:37 2013