Your job contains 1 sequence.
>037798
MDAPPPSSRLQSILQEAVQSVQWTYSLFWQICPQQGILIWGDGYYNGAIKTRKTVQPMEV
SAEEASLQRSQQLRELYESLSAGETNQPTRRPSAALSPEDLTESEWFYLMCVSFSFPSGV
GLPGKAYARQQHVWLTGANEVDSKTFSRAILAKTVVCIPFLDGVVELGTTEKVPEDLALV
QHVKSLFIDDHQGHLHPPKPALSEHSTSNPDTSSCHLRFHSQSMSPMCAAVNDDPPVNAN
QGEDDDEEEDDDDDDEEQDQSDSEAETGRNSRQGAADQIPEAVVPPVPEPSELMQLDMSE
DIRLGSPDDGSNNLDSDFHLLAVSQGVNPADDQQQRGDSHRAESSRTWPMALQEPVMIGS
SLQLPPSGQIPPEEELTPEDTHYSQTISTILQKQPTRWAESSYVTYSSTQSAFAKWTDRS
DHLLAVPVPVEGTSQWVLKYVLFTVPYLHSKYRDENSPKLGDVGGDPASRFRKGTGTPQD
EMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLESR
NINNQILEGDQRSRSADGSKDQRVLDRNARVGSGKRKLRKVEGSGGGAKPKSVDSPPPPV
ATSVQVSIIESDALVELQCGNKEGLLLDIMQMLRELLIEVTAVQSFLTNGVFTAQLRAKV
KDNVNGKKASIVEVKRAINQIIPQYVN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 037798
(687 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2118524 - symbol:TT8 "AT4G09820" species:3702 ... 728 1.7e-120 4
UNIPROTKB|Q7XPS7 - symbol:OSJNBa0065O17.4 "OSJNBa0065O17.... 496 1.6e-76 4
TAIR|locus:2026629 - symbol:EGL3 "AT1G63650" species:3702... 516 3.2e-75 2
TAIR|locus:504954829 - symbol:GL3 "AT5G41315" species:370... 511 3.7e-74 2
UNIPROTKB|Q948Y2 - symbol:Plw-OSB2 "R-type basic helix-lo... 479 7.7e-64 2
TAIR|locus:2127023 - symbol:ATMYC1 species:3702 "Arabidop... 342 3.2e-44 2
TAIR|locus:2178555 - symbol:MYC3 "AT5G46760" species:3702... 254 7.6e-37 3
TAIR|locus:2141055 - symbol:MYC4 "AT4G17880" species:3702... 241 3.5e-36 3
TAIR|locus:2035609 - symbol:MYC2 "AT1G32640" species:3702... 260 4.8e-36 3
UNIPROTKB|Q336P5 - symbol:Os10g0575000 "Os10g0575000 prot... 265 3.2e-34 3
TAIR|locus:2035237 - symbol:AT1G01260 "AT1G01260" species... 224 5.0e-29 2
TAIR|locus:2039094 - symbol:AIB "AT2G46510" species:3702 ... 207 9.1e-29 2
TAIR|locus:2172932 - symbol:NIG1 "AT5G46830" species:3702... 218 3.5e-27 3
TAIR|locus:2130619 - symbol:AT4G16430 "AT4G16430" species... 192 3.0e-25 3
TAIR|locus:2134583 - symbol:AT4G00870 "AT4G00870" species... 178 1.9e-23 4
UNIPROTKB|Q53L62 - symbol:LOC_Os11g15210 "Helix-loop-heli... 237 3.1e-23 2
UNIPROTKB|Q657A4 - symbol:P0022F12.30 "Regulatory protein... 240 1.1e-17 1
UNIPROTKB|Q2QLR0 - symbol:LOC_Os12g43620 "Helix-loop-heli... 185 2.6e-15 2
TAIR|locus:2039445 - symbol:AMS "AT2G16910" species:3702 ... 188 4.2e-14 4
UNIPROTKB|Q6YUS3 - symbol:OSJNBb0088N06.15 "BHLH protein-... 161 7.9e-13 3
UNIPROTKB|Q75GI1 - symbol:OSJNBa0013A09.16 "Putative tran... 182 2.2e-12 2
UNIPROTKB|Q2R3F6 - symbol:Os11g0523700 "Helix-loop-helix ... 185 5.9e-12 2
TAIR|locus:2090847 - symbol:ICE1 "AT3G26744" species:3702... 177 1.8e-11 2
TAIR|locus:2137574 - symbol:AT4G37850 "AT4G37850" species... 183 2.8e-11 1
UNIPROTKB|Q84R79 - symbol:OSJNBb0113I20.1 "Putative ammon... 155 7.6e-11 2
TAIR|locus:2062235 - symbol:NAI1 "AT2G22770" species:3702... 172 4.6e-10 1
UNIPROTKB|Q69IU0 - symbol:P0498F03.15 "Putative MYC-relat... 170 4.6e-10 1
UNIPROTKB|Q336V8 - symbol:Os10g0544200 "Os10g0544200 prot... 179 4.8e-10 2
UNIPROTKB|Q8H8E4 - symbol:OJ1006F06.1 "Putative bHLH tran... 180 5.4e-10 2
TAIR|locus:2155725 - symbol:bHLH093 "AT5G65640" species:3... 163 6.2e-10 2
UNIPROTKB|Q6ZBI4 - symbol:P0623F08.11 "Phaseolin G-box bi... 166 8.7e-10 1
TAIR|locus:2062225 - symbol:AT2G22750 "AT2G22750" species... 166 1.8e-09 1
UNIPROTKB|Q84R60 - symbol:OSJNBb0113I20.8 "Putative ammon... 167 2.3e-09 1
TAIR|locus:2142419 - symbol:AT5G10570 "AT5G10570" species... 164 3.5e-09 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 162 6.0e-09 1
UNIPROTKB|Q5SMX4 - symbol:P0498B01.36 "cDNA clone:J033115... 170 7.7e-09 2
UNIPROTKB|Q8LSP3 - symbol:OJ1203D03.3 "Helix-loop-helix D... 162 1.5e-08 1
UNIPROTKB|Q84LF9 - symbol:RERJ1 "Transcription Factor" sp... 158 1.6e-08 1
TAIR|locus:2093746 - symbol:FMA "AT3G24140" species:3702 ... 159 2.6e-08 1
UNIPROTKB|Q6K4B1 - symbol:OJ1595_D08.4 "Os09g0468700 prot... 156 3.9e-08 1
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 152 6.5e-08 3
TAIR|locus:2062230 - symbol:AT2G22760 "AT2G22760" species... 152 6.6e-08 1
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 152 6.8e-08 1
TAIR|locus:2116977 - symbol:AT4G01460 "AT4G01460" species... 152 8.0e-08 1
TAIR|locus:2123954 - symbol:AT4G29930 "AT4G29930" species... 148 1.2e-07 1
TAIR|locus:2046198 - symbol:FRU "AT2G28160" species:3702 ... 150 1.4e-07 1
TAIR|locus:2117773 - symbol:AT4G28790 species:3702 "Arabi... 152 1.5e-07 1
TAIR|locus:2141206 - symbol:DYT1 "AT4G21330" species:3702... 131 1.6e-07 2
UNIPROTKB|Q6ZJC8 - symbol:OJ1666_A04.16 "Os08g0477900 pro... 142 2.6e-07 1
UNIPROTKB|Q5SMX2 - symbol:P0498B01.25 "Basic helix-loop-h... 149 3.3e-07 1
UNIPROTKB|Q8H7N8 - symbol:OJ1217B09.8 "BHLH transcription... 145 5.6e-07 1
TAIR|locus:2020003 - symbol:AT1G10610 "AT1G10610" species... 134 6.5e-07 2
TAIR|locus:2207061 - symbol:AT1G72210 "AT1G72210" species... 143 8.7e-07 1
TAIR|locus:2074865 - symbol:HEC2 "AT3G50330" species:3702... 138 1.0e-06 1
TAIR|locus:2079512 - symbol:AT3G61950 "AT3G61950" species... 131 1.1e-06 2
UNIPROTKB|Q7X8R0 - symbol:OSJNBa0083N12.3 "OSJNBa0083N12.... 145 1.1e-06 1
TAIR|locus:2154197 - symbol:SPCH "AT5G53210" species:3702... 143 1.2e-06 1
TAIR|locus:2117788 - symbol:AT4G28800 species:3702 "Arabi... 144 1.3e-06 1
UNIPROTKB|Q653A4 - symbol:OSJNBa0043B22.14 "Basic helix-l... 143 1.4e-06 1
UNIPROTKB|Q58GE3 - symbol:UDT1 "Undeveloped tapetum 1" sp... 137 1.5e-06 1
UNIPROTKB|Q6YW41 - symbol:B1131G07.17 "Basic helix-loop-h... 152 1.5e-06 2
TAIR|locus:2115080 - symbol:SPT "AT4G36930" species:3702 ... 142 1.6e-06 1
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 133 1.7e-06 2
UNIPROTKB|Q6ETQ5 - symbol:P0613F08.25 "Basic helix-loop-h... 142 2.0e-06 1
UNIPROTKB|Q7FA23 - symbol:OSJNBa0058K23.6 "Os04g0618600 p... 128 2.0e-06 1
FB|FBgn0017578 - symbol:Max "Max" species:7227 "Drosophil... 120 2.0e-06 1
TAIR|locus:2053733 - symbol:PIF4 "AT2G43010" species:3702... 143 2.1e-06 2
TAIR|locus:2155543 - symbol:HEC1 "HECATE 1" species:3702 ... 135 2.9e-06 1
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 140 3.0e-06 1
TAIR|locus:2158392 - symbol:BHLH92 "AT5G43650" species:37... 134 4.1e-06 1
UNIPROTKB|Q8GRJ1 - symbol:OJ1343_B12.103 "Transcription f... 139 4.2e-06 1
UNIPROTKB|Q7XKP5 - symbol:OSJNBb0013O03.11 "OSJNBb0013O03... 133 4.5e-06 2
TAIR|locus:2009537 - symbol:AT1G22490 "AT1G22490" species... 136 4.6e-06 1
UNIPROTKB|Q6Z339 - symbol:B1121A12.20 "Os02g0726700 prote... 137 4.8e-06 1
TAIR|locus:2164605 - symbol:AT5G56960 "AT5G56960" species... 145 5.5e-06 2
UNIPROTKB|Q6ZGS3 - symbol:OJ1148_D05.9 "Putative basic-he... 137 5.7e-06 1
TAIR|locus:2042556 - symbol:AT2G31210 "AT2G31210" species... 138 5.7e-06 1
TAIR|locus:2082400 - symbol:MUTE "AT3G06120" species:3702... 129 5.9e-06 1
TAIR|locus:4010713916 - symbol:AT4G28815 species:3702 "Ar... 135 6.2e-06 1
UNIPROTKB|Q8S0C6 - symbol:B1112D09.6 "Uncharacterized pro... 138 6.3e-06 1
TAIR|locus:2042486 - symbol:AT2G31220 "AT2G31220" species... 138 6.4e-06 1
TAIR|locus:2178560 - symbol:bHLH071 "AT5G46690" species:3... 135 7.2e-06 1
TAIR|locus:2163163 - symbol:PIF7 "AT5G61270" species:3702... 135 9.1e-06 1
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 141 1.1e-05 2
UNIPROTKB|Q69JI7 - symbol:OSJNBa0026C08.39-1 "BHLH protei... 137 1.2e-05 3
TAIR|locus:2065086 - symbol:AT2G40200 "AT2G40200" species... 130 1.3e-05 1
TAIR|locus:2061634 - symbol:PIL5 "phytochrome interacting... 135 1.5e-05 1
UNIPROTKB|Q69MD0 - symbol:OSJNBb0019B14.23 "BHLH-like pro... 127 1.5e-05 1
TAIR|locus:4010713915 - symbol:AT4G28811 species:3702 "Ar... 134 2.1e-05 2
TAIR|locus:2126624 - symbol:LRL2 "AT4G30980" species:3702... 130 2.3e-05 1
TAIR|locus:2012393 - symbol:AT1G68810 "AT1G68810" species... 136 2.3e-05 2
UNIPROTKB|Q6ESL3 - symbol:OJ1294_G06.8 "DNA binding prote... 131 2.5e-05 1
UNIPROTKB|Q5KQG3 - symbol:OSJNBb0086G17.12 "Putative unch... 126 2.6e-05 1
UNIPROTKB|Q67TR8 - symbol:B1342C04.6 "Basic helix-loop-he... 126 3.0e-05 1
UNIPROTKB|Q6YTU1 - symbol:P0419H09.4 "cDNA clone:002-131-... 130 3.2e-05 1
UNIPROTKB|Q6Z9R3 - symbol:P0461F06.33 "BHLH protein famil... 126 3.4e-05 1
TAIR|locus:2077680 - symbol:PIL6 "AT3G59060" species:3702... 137 3.5e-05 2
UNIPROTKB|Q9FTQ1 - symbol:P0665D10.21 "DNA binding protei... 120 4.4e-05 2
TAIR|locus:2085964 - symbol:BHLH32 "AT3G25710" species:37... 128 4.8e-05 1
UNIPROTKB|Q7XLY9 - symbol:OSJNBa0086O06.20 "OSJNBa0086O06... 128 5.3e-05 1
WARNING: Descriptions of 32 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2118524 [details] [associations]
symbol:TT8 "AT4G09820" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0009962 "regulation of flavonoid
biosynthetic process" evidence=TAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:2000029 "regulation
of proanthocyanidin biosynthetic process" evidence=IEP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL161516 GO:GO:0009813
EMBL:AL049482 HOGENOM:HOG000237985 GO:GO:0010026 GO:GO:2000029
EMBL:AJ277509 EMBL:DQ446813 EMBL:DQ653187 IPI:IPI00530243
RefSeq:NP_192720.2 UniGene:At.10175 ProteinModelPortal:Q9FT81
SMR:Q9FT81 IntAct:Q9FT81 STRING:Q9FT81 PaxDb:Q9FT81 PRIDE:Q9FT81
EnsemblPlants:AT4G09820.1 GeneID:826571 KEGG:ath:AT4G09820
TAIR:At4g09820 eggNOG:NOG249918 InParanoid:Q9FT81 OMA:NEVDSKT
PhylomeDB:Q9FT81 ProtClustDB:CLSN2681600 Genevestigator:Q9FT81
Uniprot:Q9FT81
Length = 518
Score = 728 (261.3 bits), Expect = 1.7e-120, Sum P(4) = 1.7e-120
Identities = 144/203 (70%), Positives = 165/203 (81%)
Query: 10 LQSILQEAVQSVQWTYSLFWQICPQQGILIWGDGYYNGAIKTRKTVQPMEVSAEEASLQR 69
LQ +L+ AVQSV WTYS+FWQ CPQQ +L+WG+GYYNGAIKTRKT QP EV+AEEA+L+R
Sbjct: 20 LQGLLKTAVQSVDWTYSVFWQFCPQQRVLVWGNGYYNGAIKTRKTTQPAEVTAEEAALER 79
Query: 70 SQQLRELYESLSAGETNQPTRRPSAALSPEDLTESEWFYLMCVSFSFPSGVGLPGKAYAR 129
SQQLRELYE+L AGE+ R ALSPEDLTE+EWFYLMCVSFSFP G+PGKAYAR
Sbjct: 80 SQQLRELYETLLAGESTSEARA-CTALSPEDLTETEWFYLMCVSFSFPPPSGMPGKAYAR 138
Query: 130 QQHVWLTGANEVDSKTFSRAILAK-----TVVCIPFLDGVVELGTTEKVPEDLALVQHVK 184
++HVWL+GANEVDSKTFSRAILAK TVVCIP LDGVVELGTT+KV ED+ V+ K
Sbjct: 139 RKHVWLSGANEVDSKTFSRAILAKSAKIQTVVCIPMLDGVVELGTTKKVREDVEFVELTK 198
Query: 185 SLFIDDHQGHLHPPKPALSEHST 207
S F D + + PKPALSEHST
Sbjct: 199 SFFYDHCKTN---PKPALSEHST 218
Score = 223 (83.6 bits), Expect = 1.7e-120, Sum P(4) = 1.7e-120
Identities = 44/68 (64%), Positives = 56/68 (82%)
Query: 478 PQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDL 537
P++++S HV+AERRRREKLNE+FI LRS+VPFVTKMDK SILGDTI YV LRK++ +L
Sbjct: 358 PREDLS--HVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHEL 415
Query: 538 ESRNINNQ 545
E+ + Q
Sbjct: 416 ENTHHEQQ 423
Score = 205 (77.2 bits), Expect = 1.7e-120, Sum P(4) = 1.7e-120
Identities = 45/79 (56%), Positives = 62/79 (78%)
Query: 604 VQVSIIESDALVELQCGNKEGLLLDIMQMLRELLIEVTAVQSFLTNGVFTAQLRAKVKDN 663
V+VSIIE+D L+E++C ++GLLLDI+Q+L EL IE TAV + + + F A++RAKV+
Sbjct: 438 VEVSIIENDVLLEMRCEYRDGLLLDILQVLHELGIETTAVHTSVNDHDFEAEIRAKVR-- 495
Query: 664 VNGKKASIVEVKRAINQII 682
GKKASI EVKRAI+Q+I
Sbjct: 496 --GKKASIAEVKRAIHQVI 512
Score = 151 (58.2 bits), Expect = 6.1e-113, Sum P(4) = 6.1e-113
Identities = 37/100 (37%), Positives = 53/100 (53%)
Query: 376 LTPEDTHYSQTISTILQKQPTRWAESSYVTYSSTQSAFAKWT--DRSDHLLAVPVPVEGT 433
L E +YSQT++T+L PT S T S QS+FA W + +H P +
Sbjct: 277 LMEEGGNYSQTVTTLLMSHPTSLLSDSVSTSSYIQSSFATWRVENGKEHQQVKTAP---S 333
Query: 434 SQWVLKYVLFTVPYLHSKYRDENSPKLGDVGGDPASRFRK 473
SQWVLK ++F VP+LH +D+ P+ D+ A R R+
Sbjct: 334 SQWVLKQMIFRVPFLHDNTKDKRLPR-EDLSHVVAERRRR 372
Score = 75 (31.5 bits), Expect = 1.7e-120, Sum P(4) = 1.7e-120
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 295 QLDMSEDIRLGSPDDG--SN-NLDSDFHL 320
++ MSE++RLGSPDD SN NL SD H+
Sbjct: 234 EMTMSEEMRLGSPDDEDVSNQNLHSDLHI 262
>UNIPROTKB|Q7XPS7 [details] [associations]
symbol:OSJNBa0065O17.4 "OSJNBa0065O17.4 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL606682
ProteinModelPortal:Q7XPS7 Gramene:Q7XPS7 Uniprot:Q7XPS7
Length = 567
Score = 496 (179.7 bits), Expect = 1.6e-76, Sum P(4) = 1.6e-76
Identities = 89/170 (52%), Positives = 124/170 (72%)
Query: 5 PPSSRLQSILQEAVQSVQWTYSLFWQI---CPQQGILIWGDGYYNGAIKTRKTVQPMEVS 61
P ++ +S+L AV+S+ W+Y++FW I CP G+L W DG+YNG +KTRK +++
Sbjct: 14 PGTNHFRSLLAAAVRSISWSYAIFWSISTSCP--GVLTWNDGFYNGVVKTRKISNSADLT 71
Query: 62 AEEASLQRSQQLRELYESLSAGETNQPTRRPSAALSPEDLTESEWFYLMCVSFSFPSGVG 121
A + +QRS+QLRELY SL +GE + RRP AALSPEDL ++EW+Y++C+++SF G G
Sbjct: 72 AGQLVVQRSEQLRELYYSLLSGECDHRARRPIAALSPEDLADTEWYYVVCMTYSFQPGQG 131
Query: 122 LPGKAYARQQHVWLTGANEVDSKTFSRAILAKTVVCIPFLDGVVELGTTE 171
LPGK+YA VWL A DSKTF R++LAKT++CIPF GV+ELGTT+
Sbjct: 132 LPGKSYASNASVWLRNAQSADSKTFLRSLLAKTIICIPFTSGVLELGTTD 181
Score = 190 (71.9 bits), Expect = 1.6e-76, Sum P(4) = 1.6e-76
Identities = 40/78 (51%), Positives = 56/78 (71%)
Query: 466 DPASRFRKGTGT----PQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILG 521
D +R G G+ Q+ NHV++ERRRREKLNE F+IL+S+VP + K+DKASIL
Sbjct: 369 DCGARMSTGRGSRAALTQESGIKNHVISERRRREKLNEMFLILKSIVPSIHKVDKASILE 428
Query: 522 DTIEYVKQLRKKIQDLES 539
+TI Y+K L K++++LES
Sbjct: 429 ETIAYLKVLEKRVKELES 446
Score = 77 (32.2 bits), Expect = 1.6e-76, Sum P(4) = 1.6e-76
Identities = 21/87 (24%), Positives = 44/87 (50%)
Query: 573 SGKRKLRKVEGSGGGXXXXXXXXXXXXXXTSVQVSIIESDALVELQCGNKEGLLLDIMQM 632
+GK + ++ SGGG V V++ + L+E+QC KE ++ +
Sbjct: 467 TGKELVSEIGVSGGGDAGREHHH--------VNVTVTDKVVLLEVQCRWKELVMTRVFDA 518
Query: 633 LRELLIEVTAVQSFLTNGVFTAQLRAK 659
++ L ++V +VQ+ +G+ +++AK
Sbjct: 519 IKSLCLDVLSVQASAPDGLLGLKIQAK 545
Score = 48 (22.0 bits), Expect = 1.6e-76, Sum P(4) = 1.6e-76
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 407 SSTQSAFAKWTDRSDHLLAVPVPVEGTSQWVLKYVL 442
+S S F W + +AVPV SQ +LK V+
Sbjct: 333 NSQVSCFMAWKSAKSNEMAVPVVTGIESQKLLKKVV 368
>TAIR|locus:2026629 [details] [associations]
symbol:EGL3 "AT1G63650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009957 "epidermal
cell fate specification" evidence=RCA;IMP] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009913 "epidermal cell
differentiation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251687 EMBL:AF013465
EMBL:AF027732 EMBL:AC011622 IPI:IPI00545374 PIR:D96661
RefSeq:NP_001185302.1 RefSeq:NP_176552.1 RefSeq:NP_974080.1
UniGene:At.25024 ProteinModelPortal:Q9CAD0 SMR:Q9CAD0 IntAct:Q9CAD0
STRING:Q9CAD0 PRIDE:Q9CAD0 EnsemblPlants:AT1G63650.1
EnsemblPlants:AT1G63650.2 EnsemblPlants:AT1G63650.3 GeneID:842669
KEGG:ath:AT1G63650 GeneFarm:1894 TAIR:At1g63650 eggNOG:NOG320411
HOGENOM:HOG000237985 InParanoid:Q9CAD0 OMA:ERASANC PhylomeDB:Q9CAD0
ProtClustDB:CLSN2682588 Genevestigator:Q9CAD0 GermOnline:AT1G63650
GO:GO:0009957 Uniprot:Q9CAD0
Length = 596
Score = 516 (186.7 bits), Expect = 3.2e-75, Sum P(2) = 3.2e-75
Identities = 101/192 (52%), Positives = 138/192 (71%)
Query: 10 LQSILQEAVQSVQWTYSLFWQICPQQ-GILIWGDGYYNGAIKTRKTVQPMEVSAEEASLQ 68
L+ L +V+++QW+Y +FW + Q G+L WGDGYYNG IKTRKT+Q EV ++ L+
Sbjct: 13 LKKQLAVSVRNIQWSYGIFWSVSASQPGVLEWGDGYYNGDIKTRKTIQAAEVKIDQLGLE 72
Query: 69 RSQQLRELYESLSAGETN-----QPTRRPSAA-LSPEDLTESEWFYLMCVSFSFPSGVGL 122
RS+QLRELYESLS E++ Q TRR SAA LSPEDLT++EW+YL+C+SF F G G+
Sbjct: 73 RSEQLRELYESLSLAESSASGSSQVTRRASAAALSPEDLTDTEWYYLVCMSFVFNIGEGI 132
Query: 123 PGKAYARQQHVWLTGANEVDSKTFSRAILAK-----TVVCIPFLDGVVELGTTEKVPEDL 177
PG A + + +WL A DSK F+R++LAK TVVC PFL GV+E+GTTE + ED+
Sbjct: 133 PGGALSNGEPIWLCNAETADSKVFTRSLLAKSASLQTVVCFPFLGGVLEIGTTEHIKEDM 192
Query: 178 ALVQHVKSLFID 189
++Q VK+LF++
Sbjct: 193 NVIQSVKTLFLE 204
Score = 261 (96.9 bits), Expect = 3.2e-75, Sum P(2) = 3.2e-75
Identities = 66/207 (31%), Positives = 118/207 (57%)
Query: 477 TPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQD 536
TP++ + NH L+E++RREKLNERF+ LRS++P ++K+DK SIL DTIEY++ L+K++Q+
Sbjct: 399 TPEE--TGNHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQE 456
Query: 537 LES-RNINNQILEGDQRSRSADGSKDQRVLDRNARVGSGKRKLRKVEGSGGGXXXXXXXX 595
LES R + R +++R +A + KRK GS
Sbjct: 457 LESCRESADTETRITMMKRKKPDDEEERA---SANCMNSKRK-----GSDVNVGEDEPAD 508
Query: 596 XXXXXXT-SVQVSIIESDALVELQCGNKEGLLLDIMQMLRELLIEVTAVQSFLTNGVFTA 654
T ++++S + ++ ++EL+C +EG+LL+IM ++ +L ++ +VQS +G+
Sbjct: 509 IGYAGLTDNLRISSLGNEVVIELRCAWREGILLEIMDVISDLNLDSHSVQSSTGDGLLCL 568
Query: 655 QLRAKVKDNVNGKKASIVEVKRAINQI 681
+ K K K A+ ++ A+ ++
Sbjct: 569 TVNCKHKGT---KIATTGMIQEALQRV 592
Score = 84 (34.6 bits), Expect = 1.4e-56, Sum P(2) = 1.4e-56
Identities = 39/188 (20%), Positives = 79/188 (42%)
Query: 379 EDTHYSQTISTILQKQPTRWAESSYVTYSSTQSAFAKWTDRSDHLLAVPVPVEGTSQWVL 438
+D HY ISTI + + + +S+F +W RS +V E SQ ++
Sbjct: 326 DDVHYQGVISTIFKTTHQLILGPQFQNFDK-RSSFTRWK-RSS---SVKTLGE-KSQKMI 379
Query: 439 KYVLFTVPYLHSKYRDENSPKLGDVGGDPASRFRKGTGTPQDE-MSANHVLAERRRREK- 496
K +LF VP ++ K +E P + G+ A +K + M+ ++ + +K
Sbjct: 380 KKILFEVPLMNKK--EELLPDTPEETGNHALSEKKRREKLNERFMTLRSIIPSISKIDKV 437
Query: 497 --LNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLESRNINNQILEGDQRSR 554
L++ L+ L V +++ DT + +++K D E + + ++
Sbjct: 438 SILDDTIEYLQDLQKRVQELESCRESADTETRITMMKRKKPDDEEERASANCMNSKRKGS 497
Query: 555 SADGSKDQ 562
+ +D+
Sbjct: 498 DVNVGEDE 505
>TAIR|locus:504954829 [details] [associations]
symbol:GL3 "AT5G41315" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0010091 "trichome branching" evidence=IMP]
[GO:0001708 "cell fate specification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0009957 "epidermal cell fate
specification" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215
GO:GO:0010091 HSSP:P61244 EMBL:AB006707 eggNOG:NOG320411
HOGENOM:HOG000237985 ProtClustDB:CLSN2682588 GO:GO:0009957
EMBL:AF246291 IPI:IPI00543830 RefSeq:NP_680372.1 UniGene:At.27204
ProteinModelPortal:Q9FN69 SMR:Q9FN69 IntAct:Q9FN69 STRING:Q9FN69
EnsemblPlants:AT5G41315.1 GeneID:834133 KEGG:ath:AT5G41315
TAIR:At5g41315 InParanoid:Q9FN69 OMA:ERTSANC PhylomeDB:Q9FN69
Genevestigator:Q9FN69 Uniprot:Q9FN69
Length = 637
Score = 511 (184.9 bits), Expect = 3.7e-74, Sum P(2) = 3.7e-74
Identities = 104/215 (48%), Positives = 145/215 (67%)
Query: 10 LQSILQEAVQSVQWTYSLFWQI-CPQQGILIWGDGYYNGAIKTRKTVQPMEVSAEEASLQ 68
L+ L +V+++QW+Y +FW + Q G+L WGDGYYNG IKTRKT+Q E+ A++ L+
Sbjct: 14 LKKHLAVSVRNIQWSYGIFWSVSASQSGVLEWGDGYYNGDIKTRKTIQASEIKADQLGLR 73
Query: 69 RSQQLRELYESLSAGETN--------QPTRRPSAA-LSPEDLTESEWFYLMCVSFSFPSG 119
RS+QL ELYESLS E++ Q TRR SAA LSPEDL ++EW+YL+C+SF F G
Sbjct: 74 RSEQLSELYESLSVAESSSSGVAAGSQVTRRASAAALSPEDLADTEWYYLVCMSFVFNIG 133
Query: 120 VGLPGKAYARQQHVWLTGANEVDSKTFSRAILAK-----TVVCIPFLDGVVELGTTEKVP 174
G+PG+ +A + +WL A+ DSK FSR++LAK TVVC PFL GVVE+GTTE +
Sbjct: 134 EGMPGRTFANGEPIWLCNAHTADSKVFSRSLLAKSAAVKTVVCFPFLGGVVEIGTTEHIT 193
Query: 175 EDLALVQHVKSLFIDDHQGHLHPPKPALSEHSTSN 209
ED+ ++Q VK+ F++ + PA S++ N
Sbjct: 194 EDMNVIQCVKTSFLEAPDPYA-TILPARSDYHIDN 227
Score = 256 (95.2 bits), Expect = 3.7e-74, Sum P(2) = 3.7e-74
Identities = 64/207 (30%), Positives = 114/207 (55%)
Query: 479 QDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLE 538
+DE + NH + E++RREKLNERF+ LR ++P + K+DK SIL DTIEY+++L +++Q+LE
Sbjct: 436 RDE-TGNHAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELE 494
Query: 539 S-RNINNQILEGD---QRSRSADGSKDQRVLDRNARVGSGKRKLRKVEGSGGGXXXXXXX 594
S R + G +R + D + N G+GK KV + G
Sbjct: 495 SCRESTDTETRGTMTMKRKKPCDAGERTSANCANNETGNGK----KVSVNNVGEAEPADT 550
Query: 595 XXXXXXXTSVQVSIIESDALVELQCGNKEGLLLDIMQMLRELLIEVTAVQSFLTNGVFTA 654
++++ ++ ++EL+C +EG+LL+IM ++ +L ++ +VQS +G+
Sbjct: 551 GFTGLTD-NLRIGSFGNEVVIELRCAWREGVLLEIMDVISDLHLDSHSVQSSTGDGLLCL 609
Query: 655 QLRAKVKDNVNGKKASIVEVKRAINQI 681
+ K K + K A+ +K A+ ++
Sbjct: 610 TVNCKHKGS---KIATPGMIKEALQRV 633
Score = 92 (37.4 bits), Expect = 6.9e-57, Sum P(2) = 6.9e-57
Identities = 43/200 (21%), Positives = 84/200 (42%)
Query: 379 EDTHYSQTISTILQKQPTRWAESSYVTYSSTQSAFAKWTDRSDHLLAVPVPVEGTSQWVL 438
+D HY ISTI K + QS+F +W +S + V SQ +L
Sbjct: 355 DDVHYQSVISTIF-KTNHQLILGPQFRNCDKQSSFTRWK-KSSSSSSGTATVTAPSQGML 412
Query: 439 KYVLFTVPYLHSKYRDE-NSPKLGDVGGDPASRFRKGTGTPQDE-MSANHVLAERRRREK 496
K ++F VP +H K + +SP+ D G+ A +K + M+ ++ + +K
Sbjct: 413 KKIIFDVPRVHQKEKLMLDSPEARDETGNHAVLEKKRREKLNERFMTLRKIIPSINKIDK 472
Query: 497 LNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLESRNINNQILEGDQRSRSA 556
++ IL + ++ ++++ ++ ++ R+ D E+R +R +
Sbjct: 473 VS----ILDDTIEYLQELERR------VQELESCREST-DTETRGTMTM-----KRKKPC 516
Query: 557 DGSKDQRVLDRNARVGSGKR 576
D + N G+GK+
Sbjct: 517 DAGERTSANCANNETGNGKK 536
Score = 38 (18.4 bits), Expect = 9.3e-18, Sum P(2) = 9.3e-18
Identities = 6/22 (27%), Positives = 13/22 (59%)
Query: 397 RWAESSYVTYSSTQSAFAKWTD 418
+W+ + + S++QS +W D
Sbjct: 26 QWSYGIFWSVSASQSGVLEWGD 47
>UNIPROTKB|Q948Y2 [details] [associations]
symbol:Plw-OSB2 "R-type basic helix-loop-helix protein"
species:4530 "Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 HOGENOM:HOG000237985 EMBL:AB021080
ProteinModelPortal:Q948Y2 Gramene:Q948Y2 Genevestigator:Q948Y2
Uniprot:Q948Y2
Length = 451
Score = 479 (173.7 bits), Expect = 7.7e-64, Sum P(2) = 7.7e-64
Identities = 95/216 (43%), Positives = 140/216 (64%)
Query: 5 PPSSRLQSILQEAVQSVQWTYSLFWQICPQ-QGILIWGDGYYNGAIKTRKTVQPMEVSAE 63
P ++ +S L AV+S+ W+Y++FW G+L W DG+YNG +KTRK +++A+
Sbjct: 14 PGTNHFRSRLAAAVRSISWSYTIFWSTSTSLPGVLTWNDGFYNGEVKTRKISNLEDLTAD 73
Query: 64 EASLQRSQQLRELYESLSAGETNQPTRRPSAALSPEDLTESEWFYLMCVSFSFPSGVGLP 123
+ L+RS+QL ELY SL +GE + R+P AALSPED+ ++EW+Y++C++++F G GLP
Sbjct: 74 QLVLRRSEQLSELYYSLLSGECDHRARKPVAALSPEDIADTEWYYVVCMTYAFRPGQGLP 133
Query: 124 GKAYARQQHVWLTGANEVDSKTFSRAILAK-----TVVCIPFLDGVVELGTTEKVPEDLA 178
G++YA + VWL A DSKTF RA+LAK T+VCIPF+ GV+ELGTT+ V ED
Sbjct: 134 GRSYASNRSVWLCNAQSADSKTFLRALLAKSASIQTIVCIPFMSGVLELGTTDPVSEDPN 193
Query: 179 LVQHVKSLFIDDHQGH--LHPPKPALSEHSTSNPDT 212
LV + + ++ + Q L P S T + DT
Sbjct: 194 LVNRIVA-YLKELQFPICLEVPSSTPSPDETEDADT 228
Score = 190 (71.9 bits), Expect = 7.7e-64, Sum P(2) = 7.7e-64
Identities = 54/138 (39%), Positives = 77/138 (55%)
Query: 404 VTYSSTQSAFAKW--TDRSDHLLAVPVPVEGTSQWVLKYVLFTVPYLHSKYRDENSPKLG 461
V YS S F W + ++ ++AVP+ SQ +LK + S D S +
Sbjct: 311 VAYSHA-SCFVSWKRANPAEKVVAVPMTAGIESQKLLKKAVGGGTAWMSNIDDRGSVAI- 368
Query: 462 DVGGDPASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILG 521
T TP + + HV++ERRRREKLNE F+IL+SL+P V K+DKASIL
Sbjct: 369 -------------TTTPGSNIKS-HVMSERRRREKLNEMFLILKSLLPSVRKVDKASILA 414
Query: 522 DTIEYVKQLRKKIQDLES 539
+TI Y+K L K++++LES
Sbjct: 415 ETITYLKVLEKRVKELES 432
>TAIR|locus:2127023 [details] [associations]
symbol:ATMYC1 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0048629 "trichome
patterning" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=RCA] [GO:0009913 "epidermal cell differentiation"
evidence=RCA] [GO:0009957 "epidermal cell fate specification"
evidence=RCA] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353 EMBL:CP002687
GO:GO:0003700 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 GO:GO:0048629 IPI:IPI00938615 RefSeq:NP_001154194.1
UniGene:At.28313 ProteinModelPortal:F4JHC4 SMR:F4JHC4
EnsemblPlants:AT4G00480.2 GeneID:827965 KEGG:ath:AT4G00480
OMA:FWSLSTR Uniprot:F4JHC4
Length = 580
Score = 342 (125.4 bits), Expect = 3.2e-44, Sum P(2) = 3.2e-44
Identities = 84/208 (40%), Positives = 123/208 (59%)
Query: 7 SSRLQSILQEAVQSVQWTYSLFWQIC-PQQGILIWGDGYYNGAIKTRKTVQPMEVSAEEA 65
+S L+ L AV+SVQW+Y++FW Q G+L WG+G YNG +K RK + E S +
Sbjct: 20 NSLLRKQLALAVRSVQWSYAIFWSSSLTQPGVLEWGEGCYNGDMKKRK--KSYE-SHYKY 76
Query: 66 SLQRSQQLRELYESLSAGE--TNQPTRRP------------SAALSPEDLTESEWFYLMC 111
LQ+S++LR+LY S+ G+ T T S LSP+DL++ EW+YL+
Sbjct: 77 GLQKSKELRKLYLSMLEGDSGTTVSTTHDNLNDDDDNCHSTSMMLSPDDLSDEEWYYLVS 136
Query: 112 VSFSFPSGVGLPGKAYARQQHVWLTGANEVDSKTFSRAILAK-----TVVCIPFLDGVVE 166
+S+ F LPG+A A + +WL A ++K FSR++LA+ TVVC P+L GV+E
Sbjct: 137 MSYVFSPSQCLPGRASATGETIWLCNAQYAENKLFSRSLLARSASIQTVVCFPYLGGVIE 196
Query: 167 LGTTEKVPEDLALVQHVKSLF--IDDHQ 192
LG TE + ED L++++KS I HQ
Sbjct: 197 LGVTELISEDHNLLRNIKSCLMEISAHQ 224
Score = 193 (73.0 bits), Expect = 3.2e-44, Sum P(2) = 3.2e-44
Identities = 51/189 (26%), Positives = 104/189 (55%)
Query: 494 REKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLESRNINNQILEGDQRS 553
R K NE+F +LR++VP V ++DK SIL +TI+Y+++L ++++LES + +E QR
Sbjct: 346 RRKENEKFSVLRTMVPTVNEVDKESILNNTIKYLQELEARVEELESCMGSVNFVER-QR- 403
Query: 554 RSADGSKDQRVLDRNARVGSGKRKLRKVEGSGGGXXXXXXXXXXXXXXTSVQVSIIESDA 613
++ + D +++ + G+ K++ + G T ++V + E++
Sbjct: 404 KTTENLNDSVLIEETS--GNYDDST-KIDDNSG----ETEQVTVFRDKTHLRVKLKETEV 456
Query: 614 LVELQCGNKEGLLLDIMQMLRELLIEVTAVQSFLTNGVFTAQLRAKVKDNVNGKKASIVE 673
++E++C ++ ++ DIM+ L L ++ +V+S N T L+AK + AS+
Sbjct: 457 VIEVRCSYRDYIVADIMETLSNLHMDAFSVRSHTLNKFLTLNLKAKFR---GAAVASVGM 513
Query: 674 VKRAINQII 682
+KR + ++I
Sbjct: 514 IKRELRRVI 522
Score = 93 (37.8 bits), Expect = 1.0e-33, Sum P(2) = 1.0e-33
Identities = 47/195 (24%), Positives = 84/195 (43%)
Query: 376 LTPEDTHYSQTISTILQKQPTRWAESSY--------VTYSSTQSAFAKWTDRSDHLLAVP 427
++ ED HY +TIST+L R ++ + S S+F +W +
Sbjct: 247 ISDEDLHYKRTISTVLNYSADRSGKNDKNIRHRQPNIVTSEPGSSFLRWKQCEQQVSGFV 306
Query: 428 VPVEGTSQWVLKYVLFTVPYLHSK--YRDENSPKLGDVGGDPASRFRKGTGTPQDEMSAN 485
+ SQ VL+ +L VP +H+K + +NS D DP+ R RK +
Sbjct: 307 QKKK--SQNVLRKILHDVPLMHTKRMFPSQNSGLNQD---DPSDR-RKENEKFSVLRTMV 360
Query: 486 HVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLESRNINNQ 545
+ E + LN L+ L V +++ S +G ++ +V++ RK + N+N+
Sbjct: 361 PTVNEVDKESILNNTIKYLQELEARVEELE--SCMG-SVNFVERQRKTTE-----NLNDS 412
Query: 546 ILEGDQRSRSADGSK 560
+L + D +K
Sbjct: 413 VLIEETSGNYDDSTK 427
>TAIR|locus:2178555 [details] [associations]
symbol:MYC3 "AT5G46760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0006952 GO:GO:0009753 GO:GO:0003677
GO:GO:0009718 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251690 IPI:IPI00533290
RefSeq:NP_199488.1 UniGene:At.28315 ProteinModelPortal:Q9FIP9
SMR:Q9FIP9 DIP:DIP-58585N PaxDb:Q9FIP9 PRIDE:Q9FIP9
EnsemblPlants:AT5G46760.1 GeneID:834719 KEGG:ath:AT5G46760
TAIR:At5g46760 eggNOG:NOG295658 InParanoid:Q9FIP9 OMA:TASSIEM
PhylomeDB:Q9FIP9 ProtClustDB:CLSN2686023 Genevestigator:Q9FIP9
Uniprot:Q9FIP9
Length = 592
Score = 254 (94.5 bits), Expect = 7.6e-37, Sum P(3) = 7.6e-37
Identities = 66/192 (34%), Positives = 105/192 (54%)
Query: 9 RLQSILQEAVQSVQWTYSLFWQIC----PQQG----ILIWGDGYYNGAIKTRKTVQPMEV 60
RLQ++++ A ++ WTY++FWQI G IL WGDGYY G K
Sbjct: 55 RLQALIESAGEN--WTYAIFWQISHDFDSSTGDNTVILGWGDGYYKGEEDKEKKKNNTNT 112
Query: 61 SAEEASLQRSQQLRELYESLSAGETNQPTRRPSAALSPEDLTESEWFYLMCVSFSFPSGV 120
+ +E R + +REL +S G S + E++T++EWF+L+ ++ SF +GV
Sbjct: 113 AEQE---HRKRVIRELNSLISGGIG------VSDESNDEEVTDTEWFFLVSMTQSFVNGV 163
Query: 121 GLPGKAYARQQHVWLTGANEVDSKTFSRA----ILA-KTVVCIPFLDGVVELGTTEKVPE 175
GLPG+++ + +WL+G+ + RA I KT+VCI +GVVELG++E + +
Sbjct: 164 GLPGESFLNSRVIWLSGSGALTGSGCERAGQGQIYGLKTMVCIATQNGVVELGSSEVISQ 223
Query: 176 DLALVQHVKSLF 187
L+ V +LF
Sbjct: 224 SSDLMHKVNNLF 235
Score = 190 (71.9 bits), Expect = 7.6e-37, Sum P(3) = 7.6e-37
Identities = 43/113 (38%), Positives = 68/113 (60%)
Query: 467 PASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEY 526
P R RK ++ + NHV AER+RREKLN+RF LR++VP V+KMDKAS+LGD I Y
Sbjct: 399 PRKRGRKPANGREEPL--NHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISY 456
Query: 527 VKQLRKKIQDLES------RNINNQILEGDQRSRSADGSKDQRVLDRNARVGS 573
+ +L+ K+Q ES + ++ EG+ +K+++ ++++ S
Sbjct: 457 INELKSKLQQAESDKEEIQKKLDGMSKEGNNGKGCGSRAKERKSSNQDSTASS 509
Score = 73 (30.8 bits), Expect = 7.6e-37, Sum P(3) = 7.6e-37
Identities = 17/57 (29%), Positives = 28/57 (49%)
Query: 604 VQVSIIESDALVELQCGNKEGLLLDIMQMLRELLIEVTAVQSFLTNGVFTAQLRAKV 660
+ V II D ++ +QCG K+ M+ L+EL +EV + N + Q K+
Sbjct: 514 IDVKIIGWDVMIRVQCGKKDHPGARFMEALKELDLEVNHASLSVVNDLMIQQATVKM 570
Score = 42 (19.8 bits), Expect = 2.9e-14, Sum P(3) = 2.9e-14
Identities = 13/49 (26%), Positives = 19/49 (38%)
Query: 168 GTTEKV----PEDLALVQHVKSLFIDDHQGHLHPPKPALSEHSTSNPDT 212
GTT + +D A +++ +H L PP P N DT
Sbjct: 3 GTTSSINFLTSDDDASAAAMEAFIGTNHHSSLFPPPPQQPPQPQFNEDT 51
>TAIR|locus:2141055 [details] [associations]
symbol:MYC4 "AT4G17880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0003677 GO:GO:0009718
GO:GO:0003700 GO:GO:0006351 EMBL:AL161547 EMBL:AL021889
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 eggNOG:NOG295658
ProtClustDB:CLSN2686023 EMBL:AF251689 EMBL:AK221507 IPI:IPI00540927
PIR:T05074 RefSeq:NP_193522.1 UniGene:At.28316
ProteinModelPortal:O49687 SMR:O49687 EnsemblPlants:AT4G17880.1
GeneID:827511 KEGG:ath:AT4G17880 TAIR:At4g17880 InParanoid:O49687
OMA:SCERARQ PhylomeDB:O49687 Genevestigator:O49687 Uniprot:O49687
Length = 589
Score = 241 (89.9 bits), Expect = 3.5e-36, Sum P(3) = 3.5e-36
Identities = 62/194 (31%), Positives = 103/194 (53%)
Query: 9 RLQSILQEAVQSVQWTYSLFWQICP---------QQGILI-WGDGYYNGAIKTRKTVQPM 58
RLQ++++ A ++ WTY++FWQ +L+ WGDGYY G + + +
Sbjct: 66 RLQALIEGANEN--WTYAVFWQSSHGFAGEDNNNNNTVLLGWGDGYYKGEEEKSRKKKSN 123
Query: 59 EVSAEEASLQRSQQLRELYESLSAGETNQPTRRPSAALSPEDLTESEWFYLMCVSFSFPS 118
SA E R + +REL +S G E++T++EWF+L+ ++ SF
Sbjct: 124 PASAAEQE-HRKRVIRELNSLISGGVGG------GDEAGDEEVTDTEWFFLVSMTQSFVK 176
Query: 119 GVGLPGKAYARQQHVWLTGANEVDSKTFSRA----ILA-KTVVCIPFLDGVVELGTTEKV 173
G GLPG+A++ +WL+G+N + + RA I +T+VC+ +GVVELG++E +
Sbjct: 177 GTGLPGQAFSNSDTIWLSGSNALAGSSCERARQGQIYGLQTMVCVATENGVVELGSSEII 236
Query: 174 PEDLALVQHVKSLF 187
+ LV V + F
Sbjct: 237 HQSSDLVDKVDTFF 250
Score = 202 (76.2 bits), Expect = 3.5e-36, Sum P(3) = 3.5e-36
Identities = 47/108 (43%), Positives = 70/108 (64%)
Query: 467 PASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEY 526
P R RK ++ + NHV AER+RREKLN+RF LR++VP V+KMDKAS+LGD I Y
Sbjct: 400 PRKRGRKPANGREEPL--NHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISY 457
Query: 527 VKQLRKKIQDLES--RNINNQILEGDQRSRSADGS-KDQRVLDRNARV 571
+ +L+ K+Q ES + QI ++ + +A S KD++ L++ + V
Sbjct: 458 ISELKSKLQKAESDKEELQKQIDVMNKEAGNAKSSVKDRKCLNQESSV 505
Score = 69 (29.3 bits), Expect = 3.5e-36, Sum P(3) = 3.5e-36
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 604 VQVSIIESDALVELQCGNKEGLLLDIMQMLRELLIEVTAVQSFLTNGVFTAQLRAKV 660
V V II DA++ +QC + M+ L+EL +EV + N + Q K+
Sbjct: 511 VDVKIIGWDAMIRIQCSKRNHPGAKFMEALKELDLEVNHASLSVVNDLMIQQATVKM 567
>TAIR|locus:2035609 [details] [associations]
symbol:MYC2 "AT1G32640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009963 "positive regulation of flavonoid biosynthetic process"
evidence=IEP;RCA] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IMP] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IMP] [GO:2000068
"regulation of defense response to insect" evidence=IMP]
[GO:0009611 "response to wounding" evidence=IEP;RCA;TAS]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009620 "response to
fungus" evidence=RCA] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0009269 "response to desiccation" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0045893 GO:GO:0009753 GO:GO:0009611 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0010200
EMBL:AC017118 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0009269
GO:GO:0043619 GO:GO:0051090 eggNOG:NOG295658 GO:GO:0009963
EMBL:X99548 EMBL:AB000875 EMBL:AJ843256 EMBL:AY037203 EMBL:BT003042
EMBL:AF251691 IPI:IPI00543978 PIR:T52293 RefSeq:NP_174541.1
UniGene:At.22648 ProteinModelPortal:Q39204 SMR:Q39204 IntAct:Q39204
STRING:Q39204 PRIDE:Q39204 EnsemblPlants:AT1G32640.1 GeneID:840158
KEGG:ath:AT1G32640 GeneFarm:1895 TAIR:At1g32640 InParanoid:Q39204
KO:K13422 OMA:KRNHPAA PhylomeDB:Q39204 ProtClustDB:CLSN2682813
Genevestigator:Q39204 GermOnline:AT1G32640 GO:GO:2000068
Uniprot:Q39204
Length = 623
Score = 260 (96.6 bits), Expect = 4.8e-36, Sum P(3) = 4.8e-36
Identities = 69/202 (34%), Positives = 104/202 (51%)
Query: 10 LQSILQEAVQSVQ--WTYSLFWQICPQ-QG--ILIWGDGYYNGAI-----KTRKTVQPME 59
LQ LQ ++ WTY++FWQ G +L WGDGYY G + R + P
Sbjct: 68 LQQRLQALIEGTHEGWTYAIFWQPSYDFSGASVLGWGDGYYKGEEDKANPRRRSSSPPFS 127
Query: 60 VSAEEASLQRSQQLRELYESLSAGETNQPTRRPSAALSPEDLTESEWFYLMCVSFSFPSG 119
A++ R + LREL +S G PS E++T++EWF+L+ ++ SF G
Sbjct: 128 TPADQE--YRKKVLRELNSLISGGVA------PSDDAVDEEVTDTEWFFLVSMTQSFACG 179
Query: 120 VGLPGKAYARQQHVWLTGANEVDSKTFSRA----ILAK-TVVCIPFLDGVVELGTTEKVP 174
GL GKA+A VW++G++++ RA + T+ CIP +GVVE+G+TE +
Sbjct: 180 AGLAGKAFATGNAVWVSGSDQLSGSGCERAKQGGVFGMHTIACIPSANGVVEVGSTEPIR 239
Query: 175 EDLALVQHVKSLF-IDDHQGHL 195
+ L+ V+ LF D G L
Sbjct: 240 QSSDLINKVRILFNFDGGAGDL 261
Score = 192 (72.6 bits), Expect = 4.8e-36, Sum P(3) = 4.8e-36
Identities = 47/98 (47%), Positives = 61/98 (62%)
Query: 467 PASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEY 526
P R RK ++ + NHV AER+RREKLN+RF LR++VP V+KMDKAS+LGD I Y
Sbjct: 436 PKKRGRKPANGREEPL--NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAY 493
Query: 527 VKQLRKKIQDLESRN--INNQI----LEGDQRSRSADG 558
+ +L+ K+ ES I NQ+ LE R SA G
Sbjct: 494 INELKSKVVKTESEKLQIKNQLEEVKLELAGRKASASG 531
Score = 58 (25.5 bits), Expect = 4.8e-36, Sum P(3) = 4.8e-36
Identities = 18/82 (21%), Positives = 31/82 (37%)
Query: 579 RKVEGSGGGXXXXXXXXXXXXXXTSVQVSIIESDALVELQCGNKEGLLLDIMQMLRELLI 638
RK SGG ++V II DA++ ++ + +M L +L +
Sbjct: 525 RKASASGGDMSSSCSSIKPVGM--EIEVKIIGWDAMIRVESSKRNHPAARLMSALMDLEL 582
Query: 639 EVTAVQSFLTNGVFTAQLRAKV 660
EV + N + Q K+
Sbjct: 583 EVNHASMSVVNDLMIQQATVKM 604
>UNIPROTKB|Q336P5 [details] [associations]
symbol:Os10g0575000 "Os10g0575000 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 eggNOG:NOG295658 KO:K13422 RefSeq:NP_001065478.1
UniGene:Os.100484 STRING:Q336P5 GeneID:4349484 KEGG:osa:4349484
ProtClustDB:CLSN2698296 Uniprot:Q336P5
Length = 699
Score = 265 (98.3 bits), Expect = 3.2e-34, Sum P(3) = 3.2e-34
Identities = 66/200 (33%), Positives = 108/200 (54%)
Query: 9 RLQSILQEAVQSVQWTYSLFWQ----ICPQQGILIWGDGYYNGAIKTRKTVQPMEVSAEE 64
RLQSI++ + ++ WTY++FWQ + +L WGDGYY G ++ + +A
Sbjct: 71 RLQSIIEGSRET--WTYAIFWQSSIDVSTGASLLGWGDGYYKGCDDDKRKQRSSTPAAAA 128
Query: 65 ASLQRSQQLRELYESLSAGETNQPTRRPSAALSPEDLTESEWFYLMCVSFSFPSGVGLPG 124
R + LREL SL AG P A+ E++T++EWF+L+ ++ SFP+G+GLPG
Sbjct: 129 EQEHRKRVLREL-NSLIAGAG----AAPDEAVE-EEVTDTEWFFLVSMTQSFPNGLGLPG 182
Query: 125 KAYARQQHVWL-TGANEVDSKTFSRAIL--AKTVVCIPFLDGVVELGTTEKVPEDLALVQ 181
+A Q W+ TG + +A +T+VC+P GV+ELG+T+ + + +
Sbjct: 183 QALFAAQPTWIATGLSSAPCDRARQAYTFGLRTMVCLPLATGVLELGSTDVIFQTGDSIP 242
Query: 182 HVKSLF-IDDHQGHLHPPKP 200
+++LF + PP P
Sbjct: 243 RIRALFNLSAAAASSWPPHP 262
Score = 189 (71.6 bits), Expect = 3.2e-34, Sum P(3) = 3.2e-34
Identities = 47/116 (40%), Positives = 67/116 (57%)
Query: 467 PASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEY 526
P R RK ++ + NHV AER+RREKLN+RF LR++VP V+KMDKAS+LGD I Y
Sbjct: 508 PRKRGRKPANGREEPL--NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISY 565
Query: 527 VKQLRKKIQDLESRNINNQILEGDQRSRSADGSKDQRVLDRNARVGSGKRKLRKVE 582
+ +LR K+ LE+ + + L+ S + +D R + G G + VE
Sbjct: 566 INELRGKLTALET---DKETLQSQMESLKKE--RDARPPAPSGGGGDGGARCHAVE 616
Score = 57 (25.1 bits), Expect = 1.4e-20, Sum P(3) = 1.4e-20
Identities = 21/104 (20%), Positives = 38/104 (36%)
Query: 561 DQRVLDRNARVGSGKRKLRKVEGSGGGXXXXXXXXXXXXXXTSVQVSIIESDALVELQCG 620
D+ L +R R SGGG ++ I+ +A++ +QC
Sbjct: 579 DKETLQSQMESLKKERDARPPAPSGGGGDGGARCHA-----VEIEAKILGLEAMIRVQCH 633
Query: 621 NKEGLLLDIMQMLRELLIEVTAVQSFLTNGVFTAQLRAKVKDNV 664
+ +M LREL ++V + + Q+ K+ V
Sbjct: 634 KRNHPAARLMTALRELDLDVYHASVSVVKDLMIQQVAVKMASRV 677
Score = 41 (19.5 bits), Expect = 3.2e-34, Sum P(3) = 3.2e-34
Identities = 12/39 (30%), Positives = 16/39 (41%)
Query: 305 GSPDDGSNNLDSDFHLLAVSQGVNPADDQQQRGDSHRAE 343
GS + N H SQ P QQQ+ S +A+
Sbjct: 310 GSTSTLTENPSPSVHAPTPSQPAAPPQRQQQQQQSSQAQ 348
>TAIR|locus:2035237 [details] [associations]
symbol:AT1G01260 "AT1G01260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009694 "jasmonic acid metabolic process" evidence=RCA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG313259 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF251698 EMBL:AC023628 EMBL:AF488559
EMBL:AY079012 EMBL:AY120752 EMBL:BT004517 IPI:IPI00539052
PIR:H86142 RefSeq:NP_001077440.1 RefSeq:NP_001184883.1
RefSeq:NP_171634.1 UniGene:At.28312 ProteinModelPortal:Q9LNJ5
SMR:Q9LNJ5 IntAct:Q9LNJ5 EnsemblPlants:AT1G01260.1
EnsemblPlants:AT1G01260.2 EnsemblPlants:AT1G01260.3 GeneID:839545
KEGG:ath:AT1G01260 TAIR:At1g01260 InParanoid:Q9LNJ5 OMA:FPANYCY
PhylomeDB:Q9LNJ5 ProtClustDB:CLSN2682849 Genevestigator:Q9LNJ5
Uniprot:Q9LNJ5
Length = 590
Score = 224 (83.9 bits), Expect = 5.0e-29, Sum P(2) = 5.0e-29
Identities = 62/193 (32%), Positives = 99/193 (51%)
Query: 8 SRLQSILQEA-VQSVQWTYSLFWQICPQQG---ILIWGDGYYNGAIKTRKT--VQPMEVS 61
++L +++ + W Y++FWQI + +L WGDGY + K+ V+ + +
Sbjct: 50 NKLSDLVERPNASNFSWNYAIFWQISRSKAGDLVLCWGDGYCREPKEGEKSEIVRILSMG 109
Query: 62 AEEASLQ--RSQQLRELYESLSAGETNQPTRRPSAALSPEDLTESEWFYLMCVSFSFPSG 119
EE + Q R + L++L++ E + AL + +T++E F L + FSFP G
Sbjct: 110 REEETHQTMRKRVLQKLHDLFGGSEEE------NCALGLDRVTDTEMFLLSSMYFSFPRG 163
Query: 120 VGLPGKAYARQQHVWLTGANEVDSKTFSRAILAK-----TVVCIPFLDGVVELGTTEKVP 174
G PGK +A + VWL+ S R+ LAK TVV +P GVVELG+T +P
Sbjct: 164 EGGPGKCFASAKPVWLSDVVNSGSDYCVRSFLAKSAGIQTVVLVPTDLGVVELGSTSCLP 223
Query: 175 EDLALVQHVKSLF 187
E + ++SLF
Sbjct: 224 ESEDSILSIRSLF 236
Score = 179 (68.1 bits), Expect = 5.0e-29, Sum P(2) = 5.0e-29
Identities = 47/124 (37%), Positives = 73/124 (58%)
Query: 428 VPVEGTSQWVLKYVLFTVPY--LHSKYRDENSPKLGD------VGGDPA--SRFRKGTGT 477
+P++ +SQ +L + + S+ + NS G VG D + +R RK
Sbjct: 364 LPLQQSSQRLLPPAQMQIDFSAASSRASENNSDGEGGGEWADAVGADESGNNRPRKRGRR 423
Query: 478 PQDEMSA--NHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQ 535
P + + NHV AER+RREKLN+RF LRS+VP ++KMDKAS+LGD + Y+ +L K++
Sbjct: 424 PANGRAEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLK 483
Query: 536 DLES 539
+E+
Sbjct: 484 VMEA 487
>TAIR|locus:2039094 [details] [associations]
symbol:AIB "AT2G46510" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009611 "response to wounding" evidence=IEP;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009414
"response to water deprivation" evidence=RCA] [GO:0009620 "response
to fungus" evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic
process" evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0009737
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009611
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC006526 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC006418
EMBL:AY094399 IPI:IPI00535471 PIR:G84903 RefSeq:NP_566078.1
UniGene:At.19872 ProteinModelPortal:Q9ZPY8 SMR:Q9ZPY8 PaxDb:Q9ZPY8
PRIDE:Q9ZPY8 EnsemblPlants:AT2G46510.1 GeneID:819262
KEGG:ath:AT2G46510 TAIR:At2g46510 eggNOG:NOG313259
HOGENOM:HOG000238207 InParanoid:Q9ZPY8 OMA:KIMEDER PhylomeDB:Q9ZPY8
ProtClustDB:CLSN2917347 Genevestigator:Q9ZPY8 InterPro:IPR025610
Pfam:PF14215 Uniprot:Q9ZPY8
Length = 566
Score = 207 (77.9 bits), Expect = 9.1e-29, Sum P(2) = 9.1e-29
Identities = 59/185 (31%), Positives = 97/185 (52%)
Query: 19 QSVQWTYSLFWQICPQ---QGILIWGDGYYN--GAIKTRKTVQPME---VSAEEASLQ-- 68
++ W Y++FWQ Q +L WGDG + K V+ + AEE + Q
Sbjct: 62 ENFSWNYAIFWQQTMSRSGQQVLGWGDGCCREPNEEEESKVVRSYNFNNMGAEEETWQDM 121
Query: 69 RSQQLRELYESLSAGETNQPTRRPSAALSPEDLTESEWFYLMCVSFSFPSGVGLPGKAYA 128
R + L++L+ + + + ALS E +T +E F+L + F F G G PG+ Y+
Sbjct: 122 RKRVLQKLHRLFGGSDED------NYALSLEKVTATEIFFLASMYFFFNHGEGGPGRCYS 175
Query: 129 RQQHVWLTGANEVDSKTFSRAILAK-----TVVCIPFLDGVVELGTTEKVPEDLALVQHV 183
+HVWL+ A +S R+ +AK T+V +P GV+ELG+ +PE++ LV+ V
Sbjct: 176 SGKHVWLSDAVNSESDYCFRSFMAKSAGIRTIVMVPTDAGVLELGSVWSLPENIGLVKSV 235
Query: 184 KSLFI 188
++LF+
Sbjct: 236 QALFM 240
Score = 194 (73.4 bits), Expect = 9.1e-29, Sum P(2) = 9.1e-29
Identities = 41/105 (39%), Positives = 64/105 (60%)
Query: 467 PASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEY 526
P R RK ++ + NHV AER+RREKLN+RF LRS+VP ++KMDKAS+LGD I Y
Sbjct: 379 PRKRGRKPANGREEPL--NHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISY 436
Query: 527 VKQLRKKIQDLESRNINNQILEGDQRSRSADGSKDQRVLDRNARV 571
+K+L++K++ +E + + + + + S + + N V
Sbjct: 437 IKELQEKVKIMEDERVGTDKSLSESNTITVEESPEVDIQAMNEEV 481
>TAIR|locus:2172932 [details] [associations]
symbol:NIG1 "AT5G46830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0042538
"hyperosmotic salinity response" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0005509
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0042538
EMBL:AF252636 EMBL:AB022221 IPI:IPI00544679 RefSeq:NP_199495.1
UniGene:At.28311 ProteinModelPortal:Q9LUK7 SMR:Q9LUK7
EnsemblPlants:AT5G46830.1 GeneID:834727 KEGG:ath:AT5G46830
TAIR:At5g46830 eggNOG:NOG258937 InParanoid:Q9LUK7 OMA:HVEAERM
PhylomeDB:Q9LUK7 ProtClustDB:CLSN2914881 ArrayExpress:Q9LUK7
Genevestigator:Q9LUK7 Uniprot:Q9LUK7
Length = 511
Score = 218 (81.8 bits), Expect = 3.5e-27, Sum P(3) = 3.5e-27
Identities = 59/192 (30%), Positives = 103/192 (53%)
Query: 9 RLQSILQEAVQSVQWTYSLFWQICPQ----QGILIWGDGYYNGAI--KTRKTVQPME--V 60
RL ++L + W+Y++FW+ + +L WGDG Y G KTR ++ + +
Sbjct: 37 RLHAVLNGTHEP--WSYAIFWKPSYDDFSGEAVLKWGDGVYTGGNEEKTRGRLRRKKTIL 94
Query: 61 SAEEASLQRSQQLRELYESLSAGETNQPTRRPSAALSPEDLTESEWFYLMCVSFSFPSGV 120
S+ E +RS +REL +S GE + ++T+ EWF+L+ +++SF +G
Sbjct: 95 SSPEEKERRSNVIRELNLMIS-GEAFPVVEDDVSDDDDVEVTDMEWFFLVSMTWSFGNGS 153
Query: 121 GLPGKAYARQQHVWLTGANEVDSKTFSRA-----ILAKTVVCIPFLDGVVELGTTEKVPE 175
GL GKA+A V +TG++ + RA + +T++CIP +GV+EL +TE++
Sbjct: 154 GLAGKAFASYNPVLVTGSDLIYGSGCDRAKQGGDVGLQTILCIPSHNGVLELASTEEIRP 213
Query: 176 DLALVQHVKSLF 187
+ L ++ LF
Sbjct: 214 NSDLFNRIRFLF 225
Score = 156 (60.0 bits), Expect = 3.5e-27, Sum P(3) = 3.5e-27
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 485 NHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLE 538
NHV AER RREKLN RF LR++VP V+KMDK S+L D + Y+ +L+ K +++E
Sbjct: 343 NHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAENVE 396
Score = 50 (22.7 bits), Expect = 3.5e-27, Sum P(3) = 3.5e-27
Identities = 22/104 (21%), Positives = 43/104 (41%)
Query: 559 SKDQRV-LDRNARVGSGKRKLRKVEGSGGGXXXXXXXXXXXXXXTSVQVSIIESD-ALVE 616
SK + V L+++A + +L+++ G ++V I+ESD A+V
Sbjct: 390 SKAENVELEKHA-IEIQFNELKEIAGQRNAIPSVCKYEEKASEMMKIEVKIMESDDAMVR 448
Query: 617 LQCGNKEGLLLDIMQMLRELLIEVTAVQSFLTNGVFTAQLRAKV 660
++ +M L +L +EV + N + Q K+
Sbjct: 449 VESRKDHHPGARLMNALMDLELEVNHASISVMNDLMIQQANVKM 492
>TAIR|locus:2130619 [details] [associations]
symbol:AT4G16430 "AT4G16430" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:Z97341 EMBL:AL161544
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251688 EMBL:AF428368
EMBL:AY057626 EMBL:BT002301 IPI:IPI00546344 PIR:A71431
RefSeq:NP_193376.1 UniGene:At.33082 UniGene:At.4413
ProteinModelPortal:O23487 SMR:O23487 STRING:O23487 PaxDb:O23487
PRIDE:O23487 EnsemblPlants:AT4G16430.1 GeneID:827337
KEGG:ath:AT4G16430 TAIR:At4g16430 eggNOG:NOG246663
InParanoid:O23487 OMA:RSMSINF PhylomeDB:O23487
ProtClustDB:CLSN2685658 Genevestigator:O23487 Uniprot:O23487
Length = 467
Score = 192 (72.6 bits), Expect = 3.0e-25, Sum P(3) = 3.0e-25
Identities = 59/196 (30%), Positives = 95/196 (48%)
Query: 3 APPPSSRLQSILQEAVQSVQWTYSLFW---QICPQQG-ILIWGDGYYNGAIKTRKTVQPM 58
+PP S LQ L+ V+ W Y+LFW + G +LIWGDG+ + +K
Sbjct: 43 SPPSDSNLQQGLRHVVEGSDWDYALFWLASNVNSSDGCVLIWGDGH----CRVKKGASGE 98
Query: 59 EVSAEEASLQRSQQLRELYESLSAGETNQPTRRPSAALSPEDLTESEWFYLMCVSFSFPS 118
+ S ++ ++R + LR+L+ S + + + A LT+ + FYL + FSF
Sbjct: 99 DYSQQD-EIKR-RVLRKLHLSFVGSDEDHRLVKSGA------LTDLDMFYLASLYFSFRC 150
Query: 119 GVGLPGKA--YARQQHVWLTGANEVDSKTFSRAILAK-----TVVCIPFLDGVVELGTTE 171
G A Y + +W S R+ LA+ TV+ +P GVVELG+
Sbjct: 151 DTNKYGPAGTYVSGKPLWAADLPSCLSYYRVRSFLARSAGFQTVLSVPVNSGVVELGSLR 210
Query: 172 KVPEDLALVQHVKSLF 187
+PED ++++ VKS+F
Sbjct: 211 HIPEDKSVIEMVKSVF 226
Score = 176 (67.0 bits), Expect = 3.0e-25, Sum P(3) = 3.0e-25
Identities = 44/99 (44%), Positives = 61/99 (61%)
Query: 467 PASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEY 526
P R RK ++ + NHV AER+RREKLN+RF LR++VP ++KMDKAS+L D I Y
Sbjct: 304 PRKRGRKPANGREEAL--NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITY 361
Query: 527 VKQLRKKIQDLES------RNINNQIL--EGDQRSRSAD 557
+ ++KKI+ E+ R +NQI E D + R D
Sbjct: 362 ITDMQKKIRVYETEKQIMKRRESNQITPAEVDYQQRHDD 400
Score = 38 (18.4 bits), Expect = 3.0e-25, Sum P(3) = 3.0e-25
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 612 DALVELQCGNKEGLLLDIMQMLRE 635
DA+V L C + + ++Q LRE
Sbjct: 400 DAVVRLSCPLETHPVSKVIQTLRE 423
>TAIR|locus:2134583 [details] [associations]
symbol:AT4G00870 "AT4G00870" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161472 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF013294 EMBL:AJ519812 IPI:IPI00537799 PIR:T01559
RefSeq:NP_567195.1 UniGene:At.34506 ProteinModelPortal:O23090
SMR:O23090 EnsemblPlants:AT4G00870.1 GeneID:827990
KEGG:ath:AT4G00870 TAIR:At4g00870 eggNOG:NOG285642
InParanoid:O23090 OMA:SIECELM PhylomeDB:O23090
ProtClustDB:CLSN2917469 Genevestigator:O23090 Uniprot:O23090
Length = 423
Score = 178 (67.7 bits), Expect = 1.9e-23, Sum P(4) = 1.9e-23
Identities = 35/80 (43%), Positives = 53/80 (66%)
Query: 485 NHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLESRNINN 544
+HV AE++RREKLN RF LR++VP V++MDKAS+L D + Y++ L+ KI DLE+
Sbjct: 249 SHVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLETEIKKM 308
Query: 545 QILEGDQRSRSADGSKDQRV 564
++ E D+ S+ + V
Sbjct: 309 KMTETDKLDNSSSNTSPSSV 328
Score = 127 (49.8 bits), Expect = 1.9e-23, Sum P(4) = 1.9e-23
Identities = 38/122 (31%), Positives = 59/122 (48%)
Query: 123 PGKAYARQQHVWLTGANEVDSKTFSRAILA-----KTVVCIPFLDGVVELGTTEKVPEDL 177
P K + + VWLTG +E+ + RA A T+V IP +G++ELG++E + ++
Sbjct: 120 PRKEVSDESLVWLTGPDELRFSNYERAKEAGFHGVHTLVSIPINNGIIELGSSESIIQNR 179
Query: 178 ALVQHVKSLF----IDDHQGHLHP-PKPALSEHSTS-NPDTSSCHLRFHSQSMSPMCAAV 231
+ VKS+F H PKPA+S+HS S N S R + + AA
Sbjct: 180 NFINRVKSIFGSGKTTKHTNQTGSYPKPAVSDHSKSGNQQFGSERKRRRKLETTRVAAAT 239
Query: 232 ND 233
+
Sbjct: 240 KE 241
Score = 77 (32.2 bits), Expect = 1.9e-23, Sum P(4) = 1.9e-23
Identities = 25/101 (24%), Positives = 42/101 (41%)
Query: 1 MDAPPPSSRLQSILQEAVQSV--QWTYSLFWQIC----PQQGILIWGDGYYNGAIKTRKT 54
+ + PP LQ L+ V++ +W Y +FWQ + L+W DG++ G K +
Sbjct: 26 VSSSPPDLVLQQKLRFVVETSPDRWAYVIFWQKMFDDQSDRSYLVWVDGHFCGN-KNNNS 84
Query: 55 VQPMEVSAEEASLQRS--QQLRELYESLSAGETNQPTRRPS 93
+ ++ E L L Y + GE P + S
Sbjct: 85 QENYTTNSIECELMMDGGDDLELFYAASFYGEDRSPRKEVS 125
Score = 50 (22.7 bits), Expect = 2.0e-11, Sum P(3) = 2.0e-11
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 377 TPEDTHYSQTISTILQKQPTRWAESSYVTYSSTQSAFAKWTDRS 420
+P D Q + +++ P RWA YV + Q F +DRS
Sbjct: 29 SPPDLVLQQKLRFVVETSPDRWA---YVIF--WQKMFDDQSDRS 67
Score = 42 (19.8 bits), Expect = 1.9e-23, Sum P(4) = 1.9e-23
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 604 VQVSIIESDALVELQCGNKEGLLLDIMQMLREL 636
VQV I+ +A++ +Q N +M L E+
Sbjct: 347 VQVKIVGEEAIIRVQTENVNHPTSALMSALMEM 379
>UNIPROTKB|Q53L62 [details] [associations]
symbol:LOC_Os11g15210 "Helix-loop-helix DNA-binding domain,
putative" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC145364 EnsemblPlants:LOC_Os11g15210.1
KEGG:dosa:Os11t0258700-00 Uniprot:Q53L62
Length = 458
Score = 237 (88.5 bits), Expect = 3.1e-23, Sum P(2) = 3.1e-23
Identities = 68/195 (34%), Positives = 112/195 (57%)
Query: 477 TPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQD 536
T Q NHV++ERRRREKL E F+IL+S+VP + K+DKASIL +TI Y+K+L K++++
Sbjct: 236 TDQGSSIKNHVMSERRRREKLKEMFLILKSVVPSIHKVDKASILAETIAYLKELEKRVEE 295
Query: 537 LESRNINNQILEGDQRSRSADGSKDQRVLDRNARVGSGKRKLRKVEGSGGGXXXXXXXXX 596
LES + + R R S ++V AR KRK E + G
Sbjct: 296 LESSSQPSPRPMETTRRRCCK-STGKKV-SAGARA---KRKAPAPEDTDG---------E 341
Query: 597 XXXXXTSVQVSIIES-DALVELQCGNKEGLLLDIMQMLRELLIEVTAVQSFLTNGVFTAQ 655
++V V+I+++ + L+ELQC KE L+ + ++ + ++V +VQ+ ++G+ +
Sbjct: 342 RRHCVSNVNVTIMDNKELLLELQCQWKELLMTRVFDAIKGVSLDVLSVQASTSDGLLGLK 401
Query: 656 LRAKVKDNVNGKKAS 670
++AKV V+ K+S
Sbjct: 402 IQAKVV--VSAAKSS 414
Score = 104 (41.7 bits), Expect = 3.1e-23, Sum P(2) = 3.1e-23
Identities = 25/61 (40%), Positives = 36/61 (59%)
Query: 147 SRAILAKTVVCIPFL-DGVVELGTTEKVPEDLALVQHVKSLFIDDHQGHLHPPKPALSEH 205
S++ KT+VC+PF+ GV+ELGTT+ V ED ALV + + D PP+ A S
Sbjct: 13 SQSASIKTIVCVPFIMHGVLELGTTDPVSEDPALVDRITASLWDT------PPRAAFSSE 66
Query: 206 S 206
+
Sbjct: 67 A 67
>UNIPROTKB|Q657A4 [details] [associations]
symbol:P0022F12.30 "Regulatory protein B-Peru-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP002908 EMBL:AP003310 EnsemblPlants:LOC_Os01g39580.1
Uniprot:Q657A4
Length = 370
Score = 240 (89.5 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 78/264 (29%), Positives = 126/264 (47%)
Query: 431 EGTSQWV--LKYVLFTVPYLHSKYRDENSPKLGDVGGDPASRFRK----GTGTPQDEMSA 484
+ +S W+ L + + + ++ K GG+ A R K G G + +
Sbjct: 123 DSSSSWIELLDHAIVSPASCFVPWKRTELDKEAVAGGEAAQRLLKKVVGGGGAWMNRAAG 182
Query: 485 -----NHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLES 539
NHV++ERRRREKLNE F+IL+SLVP + K+DKASIL +TI Y+K+L +++Q+LES
Sbjct: 183 SCSIKNHVMSERRRREKLNEMFLILKSLVPSIDKVDKASILSETIAYLKELERRVQELES 242
Query: 540 RNINNQILEGDQRSRSADGSKDQRVLDRNARVGSGKRKLRKVEGSGGGXXXXXX------ 593
G + SR A + +G G G GGG
Sbjct: 243 ---------GKKVSRPAKRKPCSETI-----IGGG--------GGGGGAGAVKEHHHWVL 280
Query: 594 XXXXXXXXTSVQVSIIESDAL-VELQCGNKEGLLLDIMQMLRELLIEVTAVQSFLTNGVF 652
+ V+V +++ D L +E+QC KE ++ + ++ L ++V +VQ+ +G+
Sbjct: 281 SESQEGTPSDVRVIVMDKDELHLEVQCRWKELMMTRVFDAIKSLRLDVVSVQASAPDGLL 340
Query: 653 TAQLRAKVKDNVNGKKASIVEVKR 676
++RAK + A I E R
Sbjct: 341 GLKIRAKYASSAAVVPAMISETLR 364
>UNIPROTKB|Q2QLR0 [details] [associations]
symbol:LOC_Os12g43620 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011
KEGG:dosa:Os12t0632600-00 Gramene:Q2QLR0 OMA:TNVMPFP Uniprot:Q2QLR0
Length = 338
Score = 185 (70.2 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 46/117 (39%), Positives = 68/117 (58%)
Query: 464 GGDPASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDT 523
GG +S G QD H++AERRRREK+N+RFI L +++P + KMDKA+ILGD
Sbjct: 151 GGGGSSSSAAAPGYVQD-----HIIAERRRREKINQRFIELSTVIPGLKKMDKATILGDA 205
Query: 524 IEYVKQLRKKIQDLESRN---------INNQILEGDQRSRSADGSKDQRVLDRNARV 571
++YVK+L++K++ LE + + G Q S + DG + RV + RV
Sbjct: 206 VKYVKELQEKVKTLEEEDGGGRPAAMVVRKSSCSGRQ-SAAGDGDGEGRVPEIEVRV 261
Score = 78 (32.5 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 604 VQVSIIESDALVELQCGNKEGLLLDIMQMLRELLIEVT 641
++V + E LV +QCGN GLL+ ++ + EL + +T
Sbjct: 257 IEVRVWERSVLVRVQCGNSRGLLVRLLSEVEELRLGIT 294
>TAIR|locus:2039445 [details] [associations]
symbol:AMS "AT2G16910" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] [GO:0048658 "tapetal
layer development" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC005167 EMBL:AF488565 IPI:IPI00529182 PIR:G84545
RefSeq:NP_179283.2 UniGene:At.48482 UniGene:At.70395
ProteinModelPortal:Q9ZVX2 SMR:Q9ZVX2 STRING:Q9ZVX2 PRIDE:Q9ZVX2
EnsemblPlants:AT2G16910.1 GeneID:816194 KEGG:ath:AT2G16910
TAIR:At2g16910 eggNOG:NOG313389 HOGENOM:HOG000033929
InParanoid:Q9ZVX2 OMA:PRTKSCE PhylomeDB:Q9ZVX2
ProtClustDB:CLSN2690121 ArrayExpress:Q9ZVX2 Genevestigator:Q9ZVX2
GO:GO:0048658 Uniprot:Q9ZVX2
Length = 571
Score = 188 (71.2 bits), Expect = 4.2e-14, Sum P(4) = 4.2e-14
Identities = 64/221 (28%), Positives = 103/221 (46%)
Query: 466 DPASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIE 525
DP + + G G+ A +++AERRRR+KLN+R LRSLVP +TK+D+ASILGD I
Sbjct: 300 DPKYKKKSGKGS-----QAKNLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAIN 354
Query: 526 YVKQLRKKIQDLESRNINNQILEGDQRSRSADGS-KDQRVLDRNARVGSGKRKLRKVEGS 584
YVK+L+ + ++L+ E ++ S + DGS + Q + N V +G +
Sbjct: 355 YVKELQNEAKELQD--------ELEENSETEDGSNRPQGGMSLNGTVVTGFHPGLSCNSN 406
Query: 585 GGGXXXXXXXXXXXXXXTSV--QVSIIESDA---LVELQCGNKEGLLLDIMQMLRELLIE 639
+ QV + + D V++ C K G +M+ L L +E
Sbjct: 407 VPSVKQDVDLENSNDKGQEMEPQVDVAQLDGREFFVKVICEYKPGGFTRLMEALDSLGLE 466
Query: 640 VTAVQSF----LTNGVFTAQLRAKVKDNVNGKKASIVEVKR 676
VT + L + VF + + S++E+ R
Sbjct: 467 VTNANTTRYLSLVSNVFKVEKNDNEMVQAEHVRNSLLEITR 507
Score = 68 (29.0 bits), Expect = 4.2e-14, Sum P(4) = 4.2e-14
Identities = 25/86 (29%), Positives = 40/86 (46%)
Query: 108 YLMCVSFSFPSGVGLPGKAYARQQHVWLTGANEVDSKTFSRAILAKTVVCIPFLDGVVEL 167
+L + S P G+ + Q WL+ ++E +F + + T V IP G+VEL
Sbjct: 77 FLSHLPASIPLDSGIYAETLLTNQTGWLSESSE---PSFMQETIC-TRVLIPIPGGLVEL 132
Query: 168 GTTEKVPEDLALVQHVK---SLFIDD 190
T V ED +V V ++ +DD
Sbjct: 133 FATRHVAEDQNVVDFVMGHCNMLMDD 158
Score = 45 (20.9 bits), Expect = 4.2e-14, Sum P(4) = 4.2e-14
Identities = 9/36 (25%), Positives = 19/36 (52%)
Query: 8 SRLQSILQEA---VQSVQWTYSLFWQICPQQGILIW 40
S +Q++L++ V + W Y + W++ Q + W
Sbjct: 3 SNMQNLLEKLRPLVGARAWDYCVLWRLNEDQRFVKW 38
Score = 39 (18.8 bits), Expect = 4.2e-14, Sum P(4) = 4.2e-14
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 297 DMSEDIRLGSPDDGSNNLDSD 317
DM+E+ R+ S D S+ +D +
Sbjct: 278 DMNENGRVDSGSDCSDQIDDE 298
>UNIPROTKB|Q6YUS3 [details] [associations]
symbol:OSJNBb0088N06.15 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] [GO:0048653
"anther development" evidence=IMP] [GO:0048654 "anther
morphogenesis" evidence=IMP] [GO:0048657 "tapetal cell
differentiation" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG313389
HOGENOM:HOG000033929 OMA:PRTKSCE EMBL:AP008208 EMBL:CM000139
GO:GO:0048657 EMBL:AP004078 EMBL:AP005851 RefSeq:NP_001045710.1
UniGene:Os.50000 EnsemblPlants:LOC_Os02g02820.1 GeneID:4328113
KEGG:osa:4328113 ProtClustDB:CLSN2692391 Uniprot:Q6YUS3
Length = 552
Score = 161 (61.7 bits), Expect = 7.9e-13, Sum P(3) = 7.9e-13
Identities = 35/84 (41%), Positives = 52/84 (61%)
Query: 464 GGDPASRFR-KGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGD 522
GGDP +G ++ AER+RR+KLN LRSLVP +TKMD+ASILGD
Sbjct: 263 GGDPEDDGDGEGRSGGAKRQQCKNLEAERKRRKKLNGHLYKLRSLVPNITKMDRASILGD 322
Query: 523 TIEYVKQLRKKIQDLESRNINNQI 546
I+Y+ L+K++++L+ +N +
Sbjct: 323 AIDYIVGLQKQVKELQDELEDNHV 346
Score = 75 (31.5 bits), Expect = 7.9e-13, Sum P(3) = 7.9e-13
Identities = 30/124 (24%), Positives = 50/124 (40%)
Query: 118 SGVGLPGKAYARQQHVWLTGANEVDSKTFSRAILAKTVVCIPFLDGVVELGTTEKVPEDL 177
S +G+ +A Q +W + + E ++ A KT + +P G+VEL + + E+
Sbjct: 86 SSIGMHAQALLSNQPIWQSSSEEEEADGGGGA---KTRLLVPVAGGLVELFASRYMAEEQ 142
Query: 178 ALVQHVKSLFI-----DDHQGHLHPPKPALSEHSTSNPDTSSCHLRFHSQSMSPMCAAVN 232
+ + V + DD G PP S D L + S++ AA
Sbjct: 143 QMAELVMAQCGGGGAGDDGGGQAWPPPETPSFQWDGGADAQ--RLMYGGSSLNLFDAAAA 200
Query: 233 DDPP 236
DD P
Sbjct: 201 DDDP 204
Score = 56 (24.8 bits), Expect = 7.9e-13, Sum P(3) = 7.9e-13
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 10 LQSILQEAVQSVQWTYSLFWQICPQQGIL 38
L + L+ V S W Y ++W++ P Q L
Sbjct: 28 LDAALRPLVGSDGWDYCIYWRLSPDQRFL 56
>UNIPROTKB|Q75GI1 [details] [associations]
symbol:OSJNBa0013A09.16 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC145380
EMBL:AC135228 EMBL:AK120539 RefSeq:NP_001051131.1 UniGene:Os.7441
EnsemblPlants:LOC_Os03g51580.1 GeneID:4333965 KEGG:osa:4333965
OMA:DSCITEQ Uniprot:Q75GI1
Length = 359
Score = 182 (69.1 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 48/124 (38%), Positives = 67/124 (54%)
Query: 463 VGGDPASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGD 522
V D A P + + H+LAER+RREKL++RFI L +VP + KMDKAS+LGD
Sbjct: 160 VAADVAKAPAAAASRPASQ-NQEHILAERKRREKLSQRFIALSKIVPGLKKMDKASVLGD 218
Query: 523 TIEYVKQLRKKIQDLES----RNINNQILEGDQRSRSADGSKDQRVLDRNARVGSGKRKL 578
I+YVKQL+ +++ LE R + +L + SAD D D N G L
Sbjct: 219 AIKYVKQLQDQVKGLEEEARRRPVEAAVLV-KKSQLSADDD-DGSSCDENFDGGEATAGL 276
Query: 579 RKVE 582
++E
Sbjct: 277 PEIE 280
Score = 55 (24.4 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 16/79 (20%), Positives = 38/79 (48%)
Query: 604 VQVSIIESDALVELQCGNKEGLLLDIMQMLRELLIEV--TAVQSFLTNGVFTAQLRAKVK 661
++ + E LV++ C N++G L+ + + + + + T V F T+ + A
Sbjct: 279 IEARVSERTVLVKIHCENRKGALITALSEVETIGLTIMNTNVLPF-TSSSLDITIMATAG 337
Query: 662 DNVNGKKASIVEVKRAINQ 680
+N + S+ ++ + +NQ
Sbjct: 338 ENFS---LSVKDIVKKLNQ 353
>UNIPROTKB|Q2R3F6 [details] [associations]
symbol:Os11g0523700 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000010 EMBL:AP008217 GO:GO:0050826
GO:GO:0010440 Gene3D:4.10.280.10 SUPFAM:SSF47459
RefSeq:NP_001067987.2 UniGene:Os.56356
EnsemblPlants:LOC_Os11g32100.1 GeneID:4350609 KEGG:osa:4350609
OMA:DGKDSNA Uniprot:Q2R3F6
Length = 524
Score = 185 (70.2 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 35/58 (60%), Positives = 50/58 (86%)
Query: 482 MSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLES 539
M A +++AERRRR+KLN+R +LRS+VP ++KMD+ASILGD IEY+K+L +KI DL++
Sbjct: 333 MPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQKINDLQN 390
Score = 55 (24.4 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 21/78 (26%), Positives = 36/78 (46%)
Query: 604 VQVSIIESDAL-VELQCGNKEGLLLDIMQMLRELLIEVTAVQSFLTNGVFTAQLRAKVKD 662
V+V + E A+ + + C + GLLL M+ + L ++V NG FT + K +
Sbjct: 441 VEVRLREGRAVNIHMFCARRPGLLLSAMRAVEGLGLDVQQAVISCFNG-FTLDI-FKAEQ 498
Query: 663 NVNGKKASIVEVKRAINQ 680
+G E+K + Q
Sbjct: 499 CKDGPGLLPEEIKAVLMQ 516
>TAIR|locus:2090847 [details] [associations]
symbol:ICE1 "AT3G26744" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0050826 "response to freezing"
evidence=RCA;IMP] [GO:0010440 "stomatal lineage progression"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0048522 "positive regulation of
cellular process" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0050826 EMBL:AB016889 GO:GO:0010440
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB026648 EMBL:AY195621
EMBL:AY079016 EMBL:BT020379 EMBL:AK228443 IPI:IPI00518051
IPI:IPI00656676 RefSeq:NP_001030774.1 RefSeq:NP_001030776.2
RefSeq:NP_189309.2 UniGene:At.25302 ProteinModelPortal:Q9LSE2
SMR:Q9LSE2 STRING:Q9LSE2 PaxDb:Q9LSE2 PRIDE:Q9LSE2
EnsemblPlants:AT3G26744.1 EnsemblPlants:AT3G26744.2
EnsemblPlants:AT3G26744.4 GeneID:822287 KEGG:ath:AT3G26744
TAIR:At3g26744 eggNOG:NOG236974 HOGENOM:HOG000085036
InParanoid:Q9LSE2 OMA:NSESSGM PhylomeDB:Q9LSE2
ProtClustDB:CLSN2690572 Genevestigator:Q9LSE2 GermOnline:AT3G26744
Uniprot:Q9LSE2
Length = 494
Score = 177 (67.4 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 33/58 (56%), Positives = 49/58 (84%)
Query: 482 MSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLES 539
M A +++AERRRR+KLN+R +LRS+VP ++KMD+ASILGD I+Y+K+L ++I DL +
Sbjct: 304 MPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHN 361
Score = 58 (25.5 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 604 VQVSIIESDAL-VELQCGNKEGLLLDIMQMLRELLIEVTAVQSFLTNGVFTAQLRAK 659
V+V + E A+ + + CG + GLLL M+ L L ++V NG RA+
Sbjct: 411 VEVRLREGRAVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALDVFRAE 467
>TAIR|locus:2137574 [details] [associations]
symbol:AT4G37850 "AT4G37850" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL035709
EMBL:AL161592 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
ProtClustDB:CLSN2690865 EMBL:AF488567 IPI:IPI00544527 PIR:T06032
RefSeq:NP_195498.3 UniGene:At.31223 ProteinModelPortal:Q9T072
SMR:Q9T072 EnsemblPlants:AT4G37850.1 GeneID:829941
KEGG:ath:AT4G37850 TAIR:At4g37850 eggNOG:NOG262524
InParanoid:Q8S3F0 PhylomeDB:Q9T072 Genevestigator:Q9T072
Uniprot:Q9T072
Length = 328
Score = 183 (69.5 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 54/184 (29%), Positives = 103/184 (55%)
Query: 368 GQIPPEEELTPED--THYSQTISTILQKQPTRWAESSYVTYSSTQSAFAKWTDRSDHLLA 425
G++ + + P T+ + +++ +P + E++Y++ SS +K H +
Sbjct: 30 GEVQEAQYIFPHSFTTNNDPSYDDLIEMKPPKILETTYISPSSHLPPNSKPHHIHRHSSS 89
Query: 426 VPVPVEGTSQWVLKYVLFTVPYLHSKYRDENSPKLGDVGGDP---ASRF-RKGTGTPQ-- 479
+ E +++ ++ YL+S + SPKL + P + F RKGT Q
Sbjct: 90 RILSFEDYGSNDMEHE-YSPTYLNSIF----SPKL-EAQVQPHQKSDEFNRKGTKRAQPF 143
Query: 480 --DEMSA-NHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQD 536
++ +A +H++AER+RREKL +RF+ L +LVP + KMDKAS+LGD ++++K L++++ +
Sbjct: 144 SRNQSNAQDHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGE 203
Query: 537 LESR 540
LE +
Sbjct: 204 LEEQ 207
>UNIPROTKB|Q84R79 [details] [associations]
symbol:OSJNBb0113I20.1 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R79 Gramene:Q84R79
Uniprot:Q84R79
Length = 301
Score = 155 (59.6 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 27/55 (49%), Positives = 45/55 (81%)
Query: 486 HVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLESR 540
HV+AER+RREK+N+RF+ L +++P + KMDKA+IL D Y+++L++K++ LE +
Sbjct: 131 HVVAERKRREKINQRFMELSAVIPKLKKMDKATILSDAASYIRELQEKLKALEEQ 185
Score = 66 (28.3 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 22/85 (25%), Positives = 38/85 (44%)
Query: 604 VQVSIIESDALVELQCGNKEGLLLDIMQMLRELLIEV--TAVQSFLTNGV-FTAQLRAKV 660
V+ S + +V + C N EG+++ I+ + E+ + + V FL G + AK
Sbjct: 215 VRCSPTNNVVMVRIHCENGEGVIVRILAEVEEIHLRIINANVMPFLDQGATMIITIAAKA 274
Query: 661 KDNVNGKKASIVEVKRAINQIIPQY 685
K N + K +E R + QY
Sbjct: 275 KINRSEVKVQDLEQDRFEKAPLQQY 299
>TAIR|locus:2062235 [details] [associations]
symbol:NAI1 "AT2G22770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000240300 ProtClustDB:CLSN2690866
EMBL:AF488564 EMBL:AK176248 IPI:IPI00531737 PIR:F84616
RefSeq:NP_850031.2 UniGene:At.43434 ProteinModelPortal:Q8S3F1
SMR:Q8S3F1 STRING:Q8S3F1 PRIDE:Q8S3F1 EnsemblPlants:AT2G22770.1
GeneID:816807 KEGG:ath:AT2G22770 TAIR:At2g22770 eggNOG:NOG310015
InParanoid:Q8S3F1 OMA:TDEYLID PhylomeDB:Q8S3F1
Genevestigator:Q8S3F1 Uniprot:Q8S3F1
Length = 320
Score = 172 (65.6 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 48/171 (28%), Positives = 83/171 (48%)
Query: 476 GTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQ 535
G + + HVLAER+RR+KLNER I L +L+P + K DKA++L D I+++KQL+++++
Sbjct: 123 GRREPHLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVK 182
Query: 536 DLESRNINNQILEGDQRSRSADGSKDQRVLDRNARVGSGKRKLRKVEGSGGGXXXXXXXX 595
LE + + + DQ + Q LD ++ S S
Sbjct: 183 KLEEERVVTKKM--DQSIILV--KRSQVYLDDDSSSYSSTCSAASPLSSSSDEVSIFKQT 238
Query: 596 XXXXXXTSVQVSIIESDALVELQCGNKEGLLLDIMQMLRELLIEVTAVQSF 646
++ + + D L+ + C +G ++ I+ L + +EV V SF
Sbjct: 239 M-----PMIEARVSDRDLLIRVHCEKNKGCMIKILSSLEKFRLEV--VNSF 282
>UNIPROTKB|Q69IU0 [details] [associations]
symbol:P0498F03.15 "Putative MYC-related DNA binding
protein RD22BP1" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP006525 EMBL:AP007254
RefSeq:NP_001063693.1 UniGene:Os.86289
EnsemblPlants:LOC_Os09g34330.1 GeneID:4347601 KEGG:osa:4347601
OMA:GPTVSHV ProtClustDB:CLSN2725166 Uniprot:Q69IU0
Length = 284
Score = 170 (64.9 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 36/73 (49%), Positives = 48/73 (65%)
Query: 467 PASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEY 526
PA R + G D + +HV AER+RREKLN RF LR+ VP V++MDKAS+L D Y
Sbjct: 93 PAKRRGRKPGPRPDGPTVSHVEAERQRREKLNRRFCDLRAAVPTVSRMDKASLLADAAAY 152
Query: 527 VKQLRKKIQDLES 539
+ +LR ++ LES
Sbjct: 153 IAELRARVARLES 165
>UNIPROTKB|Q336V8 [details] [associations]
symbol:Os10g0544200 "Os10g0544200 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000086 EMBL:AP008216
EMBL:CM000147 Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG245311
EMBL:AK063669 RefSeq:NP_001065200.1 UniGene:Os.46563
EnsemblPlants:LOC_Os10g39750.1 GeneID:4349271 KEGG:osa:4349271
ProtClustDB:CLSN2693493 Uniprot:Q336V8
Length = 380
Score = 179 (68.1 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 41/97 (42%), Positives = 60/97 (61%)
Query: 461 GDVGGDPASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASIL 520
G GG AS + PQ + +++AERRRR++LN+R +LRS+VP ++KMD+ SIL
Sbjct: 172 GGGGGAAASVRPRSCRPPQPGAPSKNLMAERRRRKRLNDRLSMLRSVVPRISKMDRTSIL 231
Query: 521 GDTIEYVKQLRKKIQDLESRNINNQILEGDQRSRSAD 557
GDTI YVK+L +I +N+ + GD S S +
Sbjct: 232 GDTIGYVKELMDRI-----KNLQVEAATGDSSSSSTE 263
Score = 37 (18.1 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 84 ETNQPTRRPSAALSPEDL 101
E P RR + +PEDL
Sbjct: 15 ELMAPLRRGTPTTTPEDL 32
>UNIPROTKB|Q8H8E4 [details] [associations]
symbol:OJ1006F06.1 "Putative bHLH transcription protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000029066 EMBL:AC099399 ProteinModelPortal:Q8H8E4
STRING:Q8H8E4 Gramene:Q8H8E4 Uniprot:Q8H8E4
Length = 430
Score = 180 (68.4 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 43/108 (39%), Positives = 68/108 (62%)
Query: 463 VGGDPASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGD 522
VGG R K GTP + +++AERRRR++LN+R +LRS+VP ++KMD+ SILGD
Sbjct: 166 VGGGVHPR-SKLHGTP-----SKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGD 219
Query: 523 TIEYVKQLRKKIQDLESR-NINNQILEGDQRSRSADGSKDQRVLDRNA 569
TI+YVK+L ++I+ LE + + L+ + + + +L RN+
Sbjct: 220 TIDYVKELTERIKTLEEEIGVTPEELDLLNTMKDSSSGNNNEMLVRNS 267
Score = 38 (18.4 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 17/66 (25%), Positives = 29/66 (43%)
Query: 615 VELQCGNKEGLLLDIMQMLRELLIEVT--AVQSFLTNGVFTAQLRAKVKDNVNGKKASIV 672
+E+ C G+LL + L L +E+ V F G+ + L+ K V S
Sbjct: 282 IEICCPANPGVLLSTVSALEVLGLEIEQCVVSCFSDFGMQASCLQEDGKRQV----VSTD 337
Query: 673 EVKRAI 678
E+K+ +
Sbjct: 338 EIKQTL 343
>TAIR|locus:2155725 [details] [associations]
symbol:bHLH093 "AT5G65640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB026639 HOGENOM:HOG000029066 EMBL:AF488621 EMBL:BT025665
EMBL:AK229018 EMBL:AY085134 IPI:IPI00533579 IPI:IPI00785991
RefSeq:NP_001078801.1 RefSeq:NP_569014.1 UniGene:At.28897
ProteinModelPortal:Q9LSL1 SMR:Q9LSL1 EnsemblPlants:AT5G65640.1
GeneID:836690 KEGG:ath:AT5G65640 TAIR:At5g65640 eggNOG:NOG245311
InParanoid:Q9LSL1 OMA:PLMESDQ PhylomeDB:Q9LSL1
ProtClustDB:CLSN2686406 Genevestigator:Q9LSL1 Uniprot:Q9LSL1
Length = 351
Score = 163 (62.4 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 43/107 (40%), Positives = 67/107 (62%)
Query: 460 LGDVGGDP-ASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKAS 518
+G GG+ + +K G P + +++AERRRR++LN+R +LRS+VP ++KMD+ S
Sbjct: 157 VGYCGGETNKKKSKKLEGQP-----SKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTS 211
Query: 519 ILGDTIEYVKQLRKKI---QDLE-----SRNINNQILEGDQRSRSAD 557
ILGD I+Y+K+L KI QD E S N ++ L GD + +A+
Sbjct: 212 ILGDAIDYMKELLDKINKLQDEEQELGNSNNSHHSKLFGDLKDLNAN 258
Score = 52 (23.4 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 610 ESDALVELQCGNKEGLLLDIMQMLRELLIEV 640
+ D V++ C K GLLL + L L +E+
Sbjct: 274 DEDTRVDICCSPKPGLLLSTVNTLETLGLEI 304
>UNIPROTKB|Q6ZBI4 [details] [associations]
symbol:P0623F08.11 "Phaseolin G-box binding protein
PG1-like" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P22415 EMBL:AP003914 EMBL:AP004632
EnsemblPlants:LOC_Os08g43070.1 KEGG:dosa:Os08t0543700-00
OMA:PVISHVE Uniprot:Q6ZBI4
Length = 263
Score = 166 (63.5 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 36/76 (47%), Positives = 50/76 (65%)
Query: 464 GGDPASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDT 523
G P R G G P HV AER+RREKLN RF LR+ VP V++MDKAS+L D
Sbjct: 78 GRKPGPR-SGGGGAPP----IGHVEAERQRREKLNRRFCELRAAVPTVSRMDKASLLADA 132
Query: 524 IEYVKQLRKKIQDLES 539
++Y+ +LR++++ LE+
Sbjct: 133 VDYIAELRRRVERLEA 148
>TAIR|locus:2062225 [details] [associations]
symbol:AT2G22750 "AT2G22750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF488562 EMBL:DQ446549
EMBL:DQ653015 IPI:IPI00538506 IPI:IPI00846694 PIR:D84616
RefSeq:NP_001077944.1 RefSeq:NP_179860.2 UniGene:At.39395
ProteinModelPortal:Q1PF17 SMR:Q1PF17 EnsemblPlants:AT2G22750.2
GeneID:816805 KEGG:ath:AT2G22750 TAIR:At2g22750 eggNOG:NOG266714
HOGENOM:HOG000240300 InParanoid:Q8S3F3 OMA:FDISIIA PhylomeDB:Q1PF17
ProtClustDB:CLSN2690865 Genevestigator:Q1PF17 Uniprot:Q1PF17
Length = 305
Score = 166 (63.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 29/64 (45%), Positives = 48/64 (75%)
Query: 477 TPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQD 536
T + +H+LAER+RREKL +RF+ L +L+P + KMDKAS+LGD I+++K L++ +++
Sbjct: 118 TRSQSNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKE 177
Query: 537 LESR 540
E +
Sbjct: 178 YEEQ 181
>UNIPROTKB|Q84R60 [details] [associations]
symbol:OSJNBb0113I20.8 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R60 Gramene:Q84R60
Uniprot:Q84R60
Length = 353
Score = 167 (63.8 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 31/66 (46%), Positives = 50/66 (75%)
Query: 474 GTGTPQDEMSAN-HVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRK 532
G+G+ A H++AER+RREK+N+RFI L +++P + KMDKA+IL D + YVK++++
Sbjct: 180 GSGSSSAAPYAQEHIIAERKRREKINQRFIELSTVIPGLKKMDKATILSDAVRYVKEMQE 239
Query: 533 KIQDLE 538
K+ +LE
Sbjct: 240 KLSELE 245
>TAIR|locus:2142419 [details] [associations]
symbol:AT5G10570 "AT5G10570" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL353995 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488594 IPI:IPI00529696 PIR:T49982
RefSeq:NP_196619.1 UniGene:At.32362 ProteinModelPortal:Q9LXA9
SMR:Q9LXA9 EnsemblPlants:AT5G10570.1 GeneID:830922
KEGG:ath:AT5G10570 TAIR:At5g10570 eggNOG:NOG310833
HOGENOM:HOG000029066 InParanoid:Q9LXA9 OMA:SSAFDYP PhylomeDB:Q9LXA9
ProtClustDB:CLSN2914918 Genevestigator:Q9LXA9 Uniprot:Q9LXA9
Length = 315
Score = 164 (62.8 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 31/67 (46%), Positives = 49/67 (73%)
Query: 472 RKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLR 531
+K + + + +++AERRRR++LN+R +LRS+VP +TKMD+ SILGD I+Y+K+L
Sbjct: 138 KKRSNKKLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELL 197
Query: 532 KKIQDLE 538
KI L+
Sbjct: 198 DKINKLQ 204
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 162 (62.1 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 36/84 (42%), Positives = 54/84 (64%)
Query: 469 SRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVK 528
+R R G+G+ + + H L+E+RRR K+NE+ L+SL+P K DKAS+L + IEY+K
Sbjct: 91 ARPRGGSGSKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLK 150
Query: 529 QLRKKIQDLESRN---INNQILEG 549
QL+ ++Q L RN +N L G
Sbjct: 151 QLQLQVQMLSMRNGVYLNPSYLSG 174
>UNIPROTKB|Q5SMX4 [details] [associations]
symbol:P0498B01.36 "cDNA clone:J033115I17, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008207 EMBL:AP003417 EMBL:HQ858870
EMBL:AK102964 RefSeq:NP_001042293.1 UniGene:Os.32770 GeneID:4327325
KEGG:osa:4327325 eggNOG:NOG253236 OMA:GNNGFMC
ProtClustDB:CLSN2691168 Uniprot:Q5SMX4
Length = 439
Score = 170 (64.9 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 63/225 (28%), Positives = 96/225 (42%)
Query: 367 SGQIPPEEELTPEDTHYSQTISTILQKQPTRWAESSYVTYSSTQSAFAKWTDRSDHLLAV 426
S Q P L P + + Q +T+L P E T +T AF ++ R +
Sbjct: 142 SSQAPLPLPLPPYEPQHGQ-YTTVLSPPPPA-PELPATTTPATGGAFRRYA-RHLRPRRL 198
Query: 427 PVPVEGTSQWVLKYVLFTVPYLHSKYRDENSPKLGDVGGDPASRFRKGTGTPQDEMSANH 486
P P G Q + K + + +H AS P H
Sbjct: 199 PKP-GGCGQRMFKTAMSVLTKMHVAATYNRQYYYQQAAAAAASA--SAAEAPPSGNQLQH 255
Query: 487 VLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLESRNINNQI 546
+++ER+RREKLN+ F+ L++++P +K DK SIL EYVK L K+ +LE +N +
Sbjct: 256 MISERKRREKLNDSFLALKAVLPPGSKKDKTSILIRAREYVKSLESKLSELEEKNRELEA 315
Query: 547 LEGDQRSRSADGSKDQRVLDRNARVGSG-KRK-LRKVE--GSGGG 587
+ + +A K + G KRK L ++E SGGG
Sbjct: 316 RLASRPAAAAKNDKGETAAAPAPEAGDETKRKDLVEIEVTTSGGG 360
Score = 38 (18.4 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 208 SNPDTSSCHLRFHSQSMSPMCAA 230
S+P +SS R S S SP +A
Sbjct: 95 SSPTSSSASFRSASVSCSPESSA 117
>UNIPROTKB|Q8LSP3 [details] [associations]
symbol:OJ1203D03.3 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC099732
EnsemblPlants:LOC_Os03g12760.1 KEGG:dosa:Os03t0229100-00
HOGENOM:HOG000239880 OMA:DSCLNIT Uniprot:Q8LSP3
Length = 451
Score = 162 (62.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 30/53 (56%), Positives = 43/53 (81%)
Query: 486 HVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLE 538
HV+AER+RREKL ++F+ L ++VP + K DK S+LG TI+YVKQL +K++ LE
Sbjct: 288 HVIAERKRREKLQQQFVALATIVPGLKKTDKISLLGSTIDYVKQLEEKVKALE 340
>UNIPROTKB|Q84LF9 [details] [associations]
symbol:RERJ1 "Transcription Factor" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P01106 EMBL:AB040744
ProteinModelPortal:Q84LF9 Gramene:Q84LF9 Genevestigator:Q84LF9
Uniprot:Q84LF9
Length = 310
Score = 158 (60.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 36/78 (46%), Positives = 48/78 (61%)
Query: 461 GDVGGDPASRFRKGTGTPQDEMSAN-HVLAERRRREKLNERFIILRSLVPFVTKMDKASI 519
G GG G G D AN ++L ER RR KLNE+ LRS+VP +TKMDKASI
Sbjct: 68 GSGGGMTTMMMGGGGGGGDDAGGANKNILMERDRRRKLNEKLYALRSVVPNITKMDKASI 127
Query: 520 LGDTIEYVKQLRKKIQDL 537
+ D IEY+++L+ + Q +
Sbjct: 128 IKDAIEYIQRLQAEEQQM 145
>TAIR|locus:2093746 [details] [associations]
symbol:FMA "AT3G24140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010052
"guard cell differentiation" evidence=IMP] [GO:0045597 "positive
regulation of cell differentiation" evidence=IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0051782 "negative regulation of cell
division" evidence=IMP] [GO:0000165 "MAPK cascade" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010103 "stomatal complex
morphogenesis" evidence=RCA] [GO:0010310 "regulation of hydrogen
peroxide metabolic process" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0030154
"cell differentiation" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
GO:GO:0003677 GO:GO:0045597 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
GO:GO:0051782 EMBL:AB028621 GO:GO:0010052 EMBL:AK221324
EMBL:BT028961 EMBL:AF488624 IPI:IPI00523995 RefSeq:NP_189056.2
UniGene:At.37586 ProteinModelPortal:Q56YJ8 SMR:Q56YJ8 IntAct:Q56YJ8
STRING:Q56YJ8 PRIDE:Q56YJ8 EnsemblPlants:AT3G24140.1 GeneID:822000
KEGG:ath:AT3G24140 TAIR:At3g24140 eggNOG:NOG326823
InParanoid:Q56YJ8 OMA:KRRRLYG PhylomeDB:Q56YJ8
ProtClustDB:CLSN2680105 Genevestigator:Q56YJ8 Uniprot:Q56YJ8
Length = 414
Score = 159 (61.0 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 47/180 (26%), Positives = 88/180 (48%)
Query: 468 ASRFRKGTGTPQDEMSAN---HVLAERRRREKLNERFIILRSLVP--FVTKMDKASILGD 522
+ R R T +E+ + H+ ER RR+++NE +LRSL+P +V + D+ASI+G
Sbjct: 178 SKRKRARTSKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGG 237
Query: 523 TIEYVKQLRKKIQDLESRNINNQILE-G-DQRSRSADGSKDQRVLDRNARVGSGKRKLRK 580
IE+V++L + +Q LES+ + E G D + + S + A+ + +
Sbjct: 238 AIEFVRELEQLLQCLESQKRRRILGETGRDMTTTTTSSSSPITTVANQAQPLIITGNVTE 297
Query: 581 VEGSGGGXXXXXXXXXXXXXXTSVQVSIIESDALVELQCGNKEGLLLDIMQMLRELLIEV 640
+EG GG V+V ++ DA++++ + G L+ + L +L + +
Sbjct: 298 LEGGGG---LREETAENKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLHLSI 354
>UNIPROTKB|Q6K4B1 [details] [associations]
symbol:OJ1595_D08.4 "Os09g0468700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008215 EMBL:CM000146 eggNOG:NOG281753 EMBL:AP005399
EMBL:AP005574 RefSeq:NP_001175879.1 UniGene:Os.98668
EnsemblPlants:LOC_Os09g29360.1 GeneID:9267272 KEGG:osa:9267272
Uniprot:Q6K4B1
Length = 351
Score = 156 (60.0 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 51/206 (24%), Positives = 93/206 (45%)
Query: 486 HVLAERRRREKLNERFIILRSLVP--FVTKMDKASILGDTIEYVKQLRKKIQDLESRNIN 543
H+ ER RR+++NE +LRSL+P + + D+ASI+G I +VK+L + +Q LE+R +
Sbjct: 136 HIAVERNRRKQMNEYLAVLRSLMPPSYAQRGDQASIVGGAINFVKELEQLLQSLEARKSS 195
Query: 544 NQILEGDQRSRSADGSK----DQRVLDRNARVGSGKRKLRKVEG---SGGGXXXXXXXXX 596
Q D + +A + Q + A + ++ G G G
Sbjct: 196 RQCAAHDAAAAAAPFASFFTFPQYSMSAAAAAAPVAPVVNELHGRDDGGAGTAEAEASGS 255
Query: 597 XXXXXTSVQVSIIESDALVELQCGNKEGLLLDIMQMLRELLIEVTAVQSFLTNGVFTAQL 656
V+V+++ES A + + + LL ++ L+ + V + +
Sbjct: 256 KPSAVADVEVTMVESHANLRVLSRRRPRQLLRLVVALQGHRLTVLHLNMTSAGHMVLYSF 315
Query: 657 RAKVKDNVNGKKASIVEVKRAINQII 682
KV+D+ + S+ E+ A +QII
Sbjct: 316 SLKVEDDC--QLTSVDEIATAAHQII 339
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 152 (58.6 bits), Expect = 6.5e-08, Sum P(3) = 6.5e-08
Identities = 35/87 (40%), Positives = 54/87 (62%)
Query: 449 HSKYRDENSPKLGDVGGDPASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLV 508
HS+ +E S GD G A R G G+ + + H L+ERRRR+++NE+ L+ L+
Sbjct: 315 HSEDVEEES---GD-GRKEAGPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELI 370
Query: 509 PFVTKMDKASILGDTIEYVKQLRKKIQ 535
P K+DKAS+L + IEY+K L+ ++Q
Sbjct: 371 PNCNKVDKASMLDEAIEYLKSLQLQVQ 397
Score = 50 (22.7 bits), Expect = 6.5e-08, Sum P(3) = 6.5e-08
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 549 GDQRSRSADGSKDQRVLDRNARVGSGKRK 577
G+ +R GSKDQ + N+ + KRK
Sbjct: 485 GNGSTRDLSGSKDQTTTNNNSNLKPIKRK 513
Score = 41 (19.5 bits), Expect = 6.5e-08, Sum P(3) = 6.5e-08
Identities = 21/88 (23%), Positives = 35/88 (39%)
Query: 157 CIPFLDGVVELGTTEKVPEDLALVQHVKSLFIDDHQGHLHPPKPALSEHS--TSNPDTSS 214
C FL V T + D+A+ Q LF G+ P + S+++ S+ S
Sbjct: 107 CSDFLRDVSSPVTVNEQESDMAVNQTAFPLFQRRKDGNESAPAASSSQYNGFQSHSLYGS 166
Query: 215 CHLR-FHSQSMSPMCAAVNDDPPVNANQ 241
R SQ +P +P + +N+
Sbjct: 167 DRARDLPSQQTNPDRFTQTQEPLITSNK 194
>TAIR|locus:2062230 [details] [associations]
symbol:AT2G22760 "AT2G22760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
EMBL:AF488563 EMBL:DQ446550 EMBL:DQ653016 IPI:IPI00530407
PIR:E84616 RefSeq:NP_179861.2 UniGene:At.39393
ProteinModelPortal:Q1PF16 SMR:Q1PF16 IntAct:Q1PF16 PRIDE:Q1PF16
EnsemblPlants:AT2G22760.1 GeneID:816806 KEGG:ath:AT2G22760
TAIR:At2g22760 eggNOG:NOG292366 InParanoid:Q1PF16 OMA:GCMINIL
PhylomeDB:Q1PF16 ProtClustDB:CLSN2690866 Genevestigator:Q1PF16
Uniprot:Q1PF16
Length = 295
Score = 152 (58.6 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 32/72 (44%), Positives = 49/72 (68%)
Query: 476 GTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQ 535
GT ++ HVLAER+RREKL+E+FI L +L+P + K DK +IL D I +KQL+++++
Sbjct: 110 GTRSPVLAKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLR 169
Query: 536 DL-ESRNINNQI 546
L E + Q+
Sbjct: 170 TLKEEKEATRQM 181
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 152 (58.6 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 35/89 (39%), Positives = 54/89 (60%)
Query: 453 RDENSPKLGDVGGDPASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVT 512
R E+ LG + +R + G + + H L+E+RRR ++NE+ L+SL+P +
Sbjct: 5 RCESEEALGSSESEQPTRPARPRGK-RSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSS 63
Query: 513 KMDKASILGDTIEYVKQLRKKIQDLESRN 541
K DKAS+L D IEY+KQL+ ++Q L RN
Sbjct: 64 KTDKASMLDDAIEYLKQLQLQVQMLSMRN 92
>TAIR|locus:2116977 [details] [associations]
symbol:AT4G01460 "AT4G01460" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF488590 EMBL:AF096370 EMBL:AL161492 EMBL:AY099780
EMBL:AY128881 IPI:IPI00528581 PIR:A85019 PIR:T01948
RefSeq:NP_192055.1 UniGene:At.34425 ProteinModelPortal:Q9M128
SMR:Q9M128 EnsemblPlants:AT4G01460.1 GeneID:828089
KEGG:ath:AT4G01460 TAIR:At4g01460 eggNOG:NOG293017
HOGENOM:HOG000238962 InParanoid:Q9M128 OMA:QINGEVM PhylomeDB:Q9M128
ProtClustDB:CLSN2685500 Genevestigator:Q9M128 Uniprot:Q9M128
Length = 315
Score = 152 (58.6 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 57/226 (25%), Positives = 105/226 (46%)
Query: 470 RFRKGTGTPQ--DEMS---ANHVLAERRRREKLNERFIILRSLVP--FVTKMDKASILGD 522
R RK T P+ DE+ H+ ER RR ++NE LRSL+P F+ + D+ASI+G
Sbjct: 96 RKRKRTRAPKNKDEVENQRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGG 155
Query: 523 TIEYVKQLRKKIQDLESRNINNQILEGDQRSRSADGSKDQRVLDRNARVGSGKRKLRK-- 580
I+++K+L + +Q LE+ + D+ ++A S + N+ + S
Sbjct: 156 AIDFIKELEQLLQSLEAEKRKDGT---DETPKTASCSSSSSLACTNSSISSVSTTSENGF 212
Query: 581 VEGSGGGXXXXXXXXXXXXXXTSVQVSIIESDALVELQCGNKEGLLLDIMQMLRELLIEV 640
GGG T V+ ++I++ ++++C + +L + + EL + +
Sbjct: 213 TARFGGGDT------------TEVEATVIQNHVSLKVRCKRGKRQILKAIVSIEELKLAI 260
Query: 641 T--AVQSFLTNGVFTAQLRAKVKDNVNGKKASIVEVKRAINQIIPQ 684
+ S +++ L K++D K S E+ A++QI Q
Sbjct: 261 LHLTISSSFDFVIYSFNL--KMEDGC--KLGSADEIATAVHQIFEQ 302
>TAIR|locus:2123954 [details] [associations]
symbol:AT4G29930 "AT4G29930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161575 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AK117730 EMBL:BT005869 EMBL:AY568654
EMBL:AJ630482 EMBL:AK176201 EMBL:AK176276 EMBL:AK176674
EMBL:AK222212 EMBL:AK228201 EMBL:AF488569 IPI:IPI00516806
IPI:IPI00544272 IPI:IPI00546879 IPI:IPI00892082
RefSeq:NP_001031752.1 RefSeq:NP_001078471.1 RefSeq:NP_001119080.1
RefSeq:NP_194722.2 UniGene:At.44068 ProteinModelPortal:Q700E3
SMR:Q700E3 IntAct:Q700E3 EnsemblPlants:AT4G29930.3 GeneID:829116
KEGG:ath:AT4G29930 TAIR:At4g29930 eggNOG:NOG294060
HOGENOM:HOG000006429 InParanoid:Q8GYC3 OMA:PIENIGE PhylomeDB:Q700E3
ProtClustDB:CLSN2680169 Genevestigator:Q700E3 Uniprot:Q700E3
Length = 263
Score = 148 (57.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 33/84 (39%), Positives = 55/84 (65%)
Query: 476 GTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYV-------K 528
G S+ +V++ER RR+KLN+R LRS+VP ++K+DKAS++ D+I+Y+ K
Sbjct: 45 GAATSPASSKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEK 104
Query: 529 QLRKKIQDLESRN--INNQILEGD 550
L +I++LESR+ + N + + D
Sbjct: 105 TLEAEIRELESRSTLLENPVRDYD 128
>TAIR|locus:2046198 [details] [associations]
symbol:FRU "AT2G28160" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010039 "response to iron ion" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0034756 "regulation of iron ion
transport" evidence=IMP] [GO:0071281 "cellular response to iron
ion" evidence=IEP] [GO:0071369 "cellular response to ethylene
stimulus" evidence=IEP] [GO:0071732 "cellular response to nitric
oxide" evidence=IEP] [GO:0000041 "transition metal ion transport"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0071281 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC005851 GO:GO:0071732 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071369 EMBL:AF488570 EMBL:BT026446 IPI:IPI00547189
PIR:E84681 RefSeq:NP_850114.1 UniGene:At.43510
ProteinModelPortal:Q0V7X4 SMR:Q0V7X4 IntAct:Q0V7X4 STRING:Q0V7X4
PaxDb:Q0V7X4 PRIDE:Q0V7X4 EnsemblPlants:AT2G28160.1 GeneID:817362
KEGG:ath:AT2G28160 TAIR:At2g28160 eggNOG:NOG236355
HOGENOM:HOG000006047 InParanoid:Q0V7X4 OMA:NLKLWIT PhylomeDB:Q0V7X4
ProtClustDB:CLSN2690963 Genevestigator:Q0V7X4 GO:GO:0034756
Uniprot:Q0V7X4
Length = 318
Score = 150 (57.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 33/87 (37%), Positives = 54/87 (62%)
Query: 454 DENSPKLGDVGGDPASRFRKGTGTPQDEMSANHVL-AERRRREKLNERFIILRSLVPFVT 512
+E+ D G D ++ GT + + + L +ERRRR ++ ++ LRSLVP +T
Sbjct: 100 EEDEEDYND-GDDSSATTTNNDGTRKTKTDRSRTLISERRRRGRMKDKLYALRSLVPNIT 158
Query: 513 KMDKASILGDTIEYVKQLRKKIQDLES 539
KMDKASI+GD + YV++L+ + + L+S
Sbjct: 159 KMDKASIVGDAVLYVQELQSQAKKLKS 185
>TAIR|locus:2117773 [details] [associations]
symbol:AT4G28790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 EMBL:BT015828
EMBL:BT020214 IPI:IPI00521625 IPI:IPI00529771 IPI:IPI00915578
PIR:T04520 RefSeq:NP_194608.3 RefSeq:NP_974634.1 UniGene:At.31988
ProteinModelPortal:Q9SVU6 SMR:Q9SVU6 PRIDE:Q9SVU6
EnsemblPlants:AT4G28790.1 GeneID:829000 KEGG:ath:AT4G28790
TAIR:At4g28790 HOGENOM:HOG000240264 InParanoid:Q9SVU6
PhylomeDB:Q9SVU6 ProtClustDB:CLSN2680993 Genevestigator:Q9SVU6
Uniprot:Q9SVU6
Length = 413
Score = 152 (58.6 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 42/118 (35%), Positives = 58/118 (49%)
Query: 425 AVPVPVEGTSQWVL-KYVLFTV---PYLHSKYRDENSPKLGD---VGGDPASRFRKGTGT 477
AV + GT W L K V P + DE K + V R T +
Sbjct: 214 AVAIETAGTQSWGLCKAETEPVQRQPATETDITDERKRKTREETNVENQGTEEARDSTSS 273
Query: 478 PQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQ 535
+ + H L+ERRRR+K+NE L+ L+P TK D++S+L D IEYVK L+ +IQ
Sbjct: 274 KRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQIQ 331
>TAIR|locus:2141206 [details] [associations]
symbol:DYT1 "AT4G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0048658 "tapetal layer development" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161554
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0048658 EMBL:EF637083 EMBL:AL031187
IPI:IPI00519007 PIR:T05175 RefSeq:NP_193864.1 UniGene:At.54456
ProteinModelPortal:O81900 SMR:O81900 EnsemblPlants:AT4G21330.1
GeneID:827883 KEGG:ath:AT4G21330 TAIR:At4g21330 eggNOG:NOG316303
HOGENOM:HOG000112300 InParanoid:O81900 OMA:MEEAPPE PhylomeDB:O81900
ProtClustDB:CLSN2685365 Genevestigator:O81900 Uniprot:O81900
Length = 207
Score = 131 (51.2 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 32/76 (42%), Positives = 46/76 (60%)
Query: 466 DPASRFRKGTGTPQDEMSAN----HVLAERRRREKLNERFIILRSLVPFVTKMDKASILG 521
+P R+ T + E N ++ AERRRREKL+ R + LRS VP VT M KASI+
Sbjct: 9 EPVRMSRRKQVTKEKEEDENFKSPNLEAERRRREKLHCRLMALRSHVPIVTNMTKASIVE 68
Query: 522 DTIEYVKQLRKKIQDL 537
D I Y+ +L+ +++L
Sbjct: 69 DAITYIGELQNNVKNL 84
Score = 49 (22.3 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 13/58 (22%), Positives = 31/58 (53%)
Query: 622 KEGLLLDIMQMLRELLIEVTAVQSFLTNG--VFTAQLRAKVKDNVNGKKASIVEVKRA 677
++G+ M+++R L E+ + +NG + +A ++ + +V K ++EV R+
Sbjct: 148 RDGIFTKFMEVMRFLGFEIIDISLTTSNGAILISASVQTQELCDVEQTKDFLLEVMRS 205
>UNIPROTKB|Q6ZJC8 [details] [associations]
symbol:OJ1666_A04.16 "Os08g0477900 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003917 RefSeq:NP_001062047.1 UniGene:Os.73988
EnsemblPlants:LOC_Os08g37290.1 GeneID:4345836 KEGG:osa:4345836
OMA:LLNRDEH ProtClustDB:CLSN2697408 Uniprot:Q6ZJC8
Length = 223
Score = 142 (55.0 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 40/115 (34%), Positives = 64/115 (55%)
Query: 468 ASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYV 527
A+ RKG G+P +H AER+RR+++N LR+LVP ++MDKA++LG+ + +V
Sbjct: 9 AAAVRKG-GSPAVR---SHSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHV 64
Query: 528 KQLRKKIQDL-ESRNINNQILEGDQRSRSADGSKDQRVLDRNARV-GSGKRKLRK 580
++LR + D E ++ EGD+ D D+ D V G G R+ R+
Sbjct: 65 RELRCRADDATEGADVVVPG-EGDEVGVE-DEDDDEGERDEGCYVVGGGDRRWRR 117
>UNIPROTKB|Q5SMX2 [details] [associations]
symbol:P0498B01.25 "Basic helix-loop-helix protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003417 ProteinModelPortal:Q5SMX2
EnsemblPlants:LOC_Os01g09930.1 Gramene:Q5SMX2 HOGENOM:HOG000237612
OMA:IRAREHI Uniprot:Q5SMX2
Length = 412
Score = 149 (57.5 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 37/105 (35%), Positives = 60/105 (57%)
Query: 478 PQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDL 537
P + H+++ER+RREKLN+ F+ L++++P +K DKASIL E++K L K+ +L
Sbjct: 177 PPSDNQLQHMISERKRREKLNDSFVALKAVLPTGSKKDKASILIRAREHIKSLESKLSEL 236
Query: 538 ESRNINNQILEGDQRSRSADGSKDQRVLDRNARVGSGKRKLRKVE 582
E +N + LE SR A +K+ + A G ++ VE
Sbjct: 237 EEKN---RELEARLASRPA--AKNDKGETAAAEAGDETKREDLVE 276
>UNIPROTKB|Q8H7N8 [details] [associations]
symbol:OJ1217B09.8 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC121489
EMBL:HQ858866 EMBL:AK107555 RefSeq:NP_001049217.1 UniGene:Os.31303
STRING:Q8H7N8 EnsemblPlants:LOC_Os03g08930.1 GeneID:4331887
KEGG:dosa:Os10t0376900-01 KEGG:osa:4331887 OMA:RIPPLHL
ProtClustDB:CLSN2693619 Uniprot:Q8H7N8
Length = 329
Score = 145 (56.1 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 50/206 (24%), Positives = 91/206 (44%)
Query: 486 HVLAERRRREKLNERFIILRSLVP--FVTKMDKASILGDTIEYVKQLRKKIQDLE-SRNI 542
H+ ER RR ++NE +LRSL+P + + D+ASI+G I YVK+L + +Q LE +++
Sbjct: 113 HIAVERNRRRQMNEYLAVLRSLMPASYSQRGDQASIVGGAINYVKELEQLLQSLEVQKSL 172
Query: 543 NNQILEGDQRSRSA-DGSKDQRVLDRNARVGSGKRKLRKVEGSGGGXXXXXXXXXXXXXX 601
N+ D S G + R G GS
Sbjct: 173 KNRSGAMDAAGDSPFAGFFSFPQYSTSPRTGCSAAASAGSSGSASSVVMDDTAGSAESGR 232
Query: 602 TS-----VQVSIIESDALVELQCGNKEGLLLDIMQMLRELLIEVTAVQSFLTNGVFTAQL 656
S ++V+++E A +++ + LL ++ L++L I + + +
Sbjct: 233 QSAAIADIEVTMVEGHASLKVLARRRPKQLLKLVVGLQQLRIPPLHLNVTTVDAMVLYSF 292
Query: 657 RAKVKDNVNGKKASIVEVKRAINQII 682
KV+D+ K S+ ++ A++QI+
Sbjct: 293 SLKVEDD--SKLGSVEDIATAVHQIL 316
>TAIR|locus:2020003 [details] [associations]
symbol:AT1G10610 "AT1G10610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC009398 Gene3D:4.10.280.10
SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215 EMBL:AC007067
HOGENOM:HOG000033929 EMBL:AK229375 EMBL:AF488620 IPI:IPI00786098
PIR:F86239 RefSeq:NP_172531.2 UniGene:At.42172
ProteinModelPortal:Q0WNR2 SMR:Q0WNR2 EnsemblPlants:AT1G10610.1
GeneID:837604 KEGG:ath:AT1G10610 TAIR:At1g10610 eggNOG:NOG318339
OMA:GIHGEVV PhylomeDB:Q0WNR2 ProtClustDB:CLSN2920225
Genevestigator:Q0WNR2 Uniprot:Q0WNR2
Length = 441
Score = 134 (52.2 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 32/114 (28%), Positives = 66/114 (57%)
Query: 478 PQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQL---RKKI 534
P + + ++ +ER+RRE++N+ LR++VP +TK++K I D ++Y+ +L ++K+
Sbjct: 257 PTENFKSKNLHSERKRRERINQAMYGLRAVVPKITKLNKIGIFSDAVDYINELLVEKQKL 316
Query: 535 QDLESRNINN---QILEGDQRSRSADGSKDQRVLDRNARVGSGKRKLRKVEGSG 585
+D E + IN + + +++S AD ++ N RV + K+ +V +G
Sbjct: 317 ED-ELKGINEMECKEIAAEEQSAIADPEAERVSSKSNKRVKKNEVKI-EVHETG 368
Score = 58 (25.5 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 27/111 (24%), Positives = 45/111 (40%)
Query: 80 LSAGETNQPTRRPSAALSPEDLTESEWFYLMCVSFS-FPSGV----GLPGKAYARQQHVW 134
L E R+ A+ +D + L C + S FP + G+ G+ + W
Sbjct: 57 LENSEEGGTGRKKKASFCRDDHNKHRIRTLACEALSRFPLFMPLYPGIHGEVVMSKSPKW 116
Query: 135 LTGANEVDSKTFSRAILAKTVVCIPFLDGVVELGTTEKVPEDLALVQHVKS 185
L + S+ + T V +P DG+VEL + P D ++V + S
Sbjct: 117 LVNSG-------SKMEMFSTRVLVPVSDGLVELFAFDMRPFDESMVHLIMS 160
>TAIR|locus:2207061 [details] [associations]
symbol:AT1G72210 "AT1G72210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005634 GO:GO:0009536
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC067754 HOGENOM:HOG000238962 eggNOG:NOG281753
ProtClustDB:CLSN2679534 EMBL:AJ459771 EMBL:BT003871 EMBL:BT006086
IPI:IPI00538709 PIR:F96745 RefSeq:NP_177366.1 UniGene:At.35130
ProteinModelPortal:Q9C7T4 SMR:Q9C7T4 EnsemblPlants:AT1G72210.1
GeneID:843553 KEGG:ath:AT1G72210 TAIR:At1g72210 InParanoid:Q9C7T4
OMA:PQDPFSY PhylomeDB:Q9C7T4 Genevestigator:Q9C7T4 Uniprot:Q9C7T4
Length = 320
Score = 143 (55.4 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 57/248 (22%), Positives = 107/248 (43%)
Query: 445 VPYLHSKYRDENSPKLGDV--GGDPASRFRKGTGTPQDEMS---ANHVLAERRRREKLNE 499
+PY S E+ P DV GG R R + ++E+ H+ ER RR+++NE
Sbjct: 82 LPY-GSAVDTESQPPPSDVAAGGGRRKRRRTRSSKNKEEIENQRMTHIAVERNRRKQMNE 140
Query: 500 RFIILRSLVP--FVTKMDKASILGDTIEYVKQLRKKIQDLES--RNINNQILEGDQRSRS 555
+LRSL+P + + D+ASI+G I Y+K+L +Q +E + G ++++
Sbjct: 141 YLAVLRSLMPPYYAQRGDQASIVGGAINYLKELEHHLQSMEPPVKTATEDTGAGHDQTKT 200
Query: 556 ADGSKDQRVLDRNARVGSGKRKLRKVEGSGGGXXXXXXXXXXXXXXTSVQVSIIESDALV 615
S D A R G ++V+++ES A +
Sbjct: 201 TSASSSGPFSDFFAFPQYSNRPTSAAAAEG---------------MAEIEVTMVESHASL 245
Query: 616 ELQCGNKEGLLLDIMQMLRELLIEVTAVQSFLTNGVFTAQLRAKVKDNVNGKKASIVE-V 674
++ + LL ++ ++ L + + + + + KV++ G + + VE +
Sbjct: 246 KILAKKRPRQLLKLVSSIQSLRLTLLHLNVTTRDDSVLYSISVKVEE---GSQLNTVEDI 302
Query: 675 KRAINQII 682
A+NQI+
Sbjct: 303 AAAVNQIL 310
>TAIR|locus:2074865 [details] [associations]
symbol:HEC2 "AT3G50330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] [GO:0080126 "ovary
septum development" evidence=IGI] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL132976
HOGENOM:HOG000242863 ProtClustDB:CLSN2684406 GO:GO:0048462
GO:GO:0010500 EMBL:BT010607 EMBL:AK175679 EMBL:AK175912
EMBL:AK176020 IPI:IPI00532987 PIR:T45579 RefSeq:NP_190602.1
UniGene:At.35505 ProteinModelPortal:Q9SND4 SMR:Q9SND4 IntAct:Q9SND4
EnsemblPlants:AT3G50330.1 GeneID:824195 KEGG:ath:AT3G50330
TAIR:At3g50330 eggNOG:NOG315110 InParanoid:Q9SND4 OMA:NANMAAM
PhylomeDB:Q9SND4 Genevestigator:Q9SND4 GO:GO:0080126 Uniprot:Q9SND4
Length = 231
Score = 138 (53.6 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 33/73 (45%), Positives = 45/73 (61%)
Query: 472 RKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLR 531
RK +D S +A R RRE+++ER IL+ LVP TKMD AS+L + I YVK L+
Sbjct: 120 RKNVRISKDPQS----VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK 175
Query: 532 KKIQDLESRNINN 544
K++Q LE + N
Sbjct: 176 KQVQSLEEHAVVN 188
>TAIR|locus:2079512 [details] [associations]
symbol:AT3G61950 "AT3G61950" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL138642 HOGENOM:HOG000238962 EMBL:AF488600 EMBL:AK118527
EMBL:BT005298 EMBL:AJ630481 EMBL:AY568653 EMBL:AY088741
IPI:IPI00525313 IPI:IPI00529988 PIR:T47987 RefSeq:NP_567121.1
RefSeq:NP_850735.1 UniGene:At.22308 ProteinModelPortal:Q700E4
SMR:Q700E4 IntAct:Q700E4 EnsemblPlants:AT3G61950.1 GeneID:825368
KEGG:ath:AT3G61950 TAIR:At3g61950 eggNOG:NOG324736
InParanoid:Q700E4 OMA:RINHIAV PhylomeDB:Q700E4
ProtClustDB:CLSN2683564 Genevestigator:Q700E4 Uniprot:Q700E4
Length = 358
Score = 131 (51.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 32/84 (38%), Positives = 48/84 (57%)
Query: 485 NHVLAERRRREKLNERFIILRSLVP--FVTKMDKASILGDTIEYVKQLRKKIQDLESRN- 541
NH+ ER RR ++NE LR+L+P ++ + D+ASI+G I YVK L + IQ LES+
Sbjct: 179 NHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQIIQSLESQKR 238
Query: 542 ----INNQILEGDQRSRSADGSKD 561
N++++E S S D
Sbjct: 239 TQQQSNSEVVENALNHLSGISSND 262
Score = 56 (24.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 16/79 (20%), Positives = 42/79 (53%)
Query: 604 VQVSIIESDALVELQCGNKEGLLLDIMQMLRELLIEVTAVQ-SFLTNGVFTAQLRAKVKD 662
++ ++I++ +++QC K+G LL + L +L + V + + ++ + K++D
Sbjct: 276 IEATVIQNHVSLKVQCEKKQGQLLKGIISLEKLKLTVLHLNITTSSHSSVSYSFNLKMED 335
Query: 663 NVNGKKASIVEVKRAINQI 681
+ + A E+ A+++I
Sbjct: 336 ECDLESAD--EITAAVHRI 352
>UNIPROTKB|Q7X8R0 [details] [associations]
symbol:OSJNBa0083N12.3 "OSJNBa0083N12.3 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 EMBL:CM000141 eggNOG:NOG254981 EMBL:AL606683
RefSeq:NP_001053749.1 UniGene:Os.49995
EnsemblPlants:LOC_Os04g51070.1 GeneID:4336865 KEGG:osa:4336865
OMA:RASIVGD ProtClustDB:CLSN2695079 Uniprot:Q7X8R0
Length = 464
Score = 145 (56.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 40/101 (39%), Positives = 60/101 (59%)
Query: 466 DPASRFRKGTGT-PQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTI 524
D R+G G + + AN ER RRE+LN +F LR L P TK D+ASI+GD I
Sbjct: 246 DSVLECRRGKGEFGKGKGKANFA-TERERREQLNVKFRTLRMLFPNPTKNDRASIVGDAI 304
Query: 525 EYVKQLRKKIQDL-----ESRNINNQ--ILEGDQRSRSADG 558
EY+ +L + +++L + R+ NN+ +L+ DQ + +ADG
Sbjct: 305 EYIDELNRTVKELKILVEQKRHGNNRRKVLKLDQEA-AADG 344
>TAIR|locus:2154197 [details] [associations]
symbol:SPCH "AT5G53210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010374 "stomatal complex development" evidence=IMP]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
[GO:0042127 "regulation of cell proliferation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB013388 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 GO:GO:0010374 EMBL:DQ868373
EMBL:AJ630498 EMBL:AY568670 IPI:IPI00520239 RefSeq:NP_200133.2
UniGene:At.50528 ProteinModelPortal:Q700C7 SMR:Q700C7 STRING:Q700C7
EnsemblPlants:AT5G53210.1 GeneID:835402 KEGG:ath:AT5G53210
TAIR:At5g53210 eggNOG:NOG325833 InParanoid:Q700C7 OMA:NHESSVI
PhylomeDB:Q700C7 ProtClustDB:CLSN2719098 Genevestigator:Q700C7
Uniprot:Q700C7
Length = 364
Score = 143 (55.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 35/90 (38%), Positives = 55/90 (61%)
Query: 453 RDENSPKLGDVGGDPASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVP--F 510
R E + D G+ A K G Q +MS HV ER RR+++NE +LRSL+P +
Sbjct: 76 RKEEDEEEEDGDGE-AEEDNKQDG--QQKMS--HVTVERNRRKQMNEHLTVLRSLMPCFY 130
Query: 511 VTKMDKASILGDTIEYVKQLRKKIQDLESR 540
V + D+ASI+G +EY+ +L++ +Q LE++
Sbjct: 131 VKRGDQASIIGGVVEYISELQQVLQSLEAK 160
>TAIR|locus:2117788 [details] [associations]
symbol:AT4G28800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 IPI:IPI00517558
IPI:IPI01020410 PIR:T04519 RefSeq:NP_194609.5 UniGene:At.71648
ProteinModelPortal:Q9SVU7 SMR:Q9SVU7 GeneID:829001
KEGG:ath:AT4G28800 TAIR:At4g28800 InParanoid:Q9SVU7
Genevestigator:Q9SVU7 Uniprot:Q9SVU7
Length = 445
Score = 144 (55.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 32/72 (44%), Positives = 42/72 (58%)
Query: 472 RKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLR 531
R T + + H LAERRRREK+NE+ L+ L+P K K S L D IEYVK L+
Sbjct: 246 RGSTSRKRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVKSLQ 305
Query: 532 KKIQDLESRNIN 543
+IQ + S +N
Sbjct: 306 SQIQGMMSPMMN 317
>UNIPROTKB|Q653A4 [details] [associations]
symbol:OSJNBa0043B22.14 "Basic helix-loop-helix-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP005470 RefSeq:NP_001174827.1
UniGene:Os.73031 EnsemblPlants:LOC_Os06g33450.2 GeneID:9268477
KEGG:osa:9268477 OMA:YASPAMT Uniprot:Q653A4
Length = 396
Score = 143 (55.4 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 37/110 (33%), Positives = 66/110 (60%)
Query: 444 TVPYLHSKYRDEN-SPKLGDVGGDPAS-RFRKGTGTPQ----DEMSAN-----HVLAERR 492
TVP ++K R+E + + GD D S + R+ +P+ D +A H+ ER
Sbjct: 86 TVPATNNKRREEEVADRDGDGDDDDGSPQKRRKCCSPESSTTDVAAATTPKTAHIAVERN 145
Query: 493 RREKLNERFIILRSLVP--FVTKMDKASILGDTIEYVKQLRKKIQDLESR 540
RR+++NE +LRSL+P +V + D+ASI+G ++Y+K+L++ + LE++
Sbjct: 146 RRKQMNENLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLHSLEAK 195
>UNIPROTKB|Q58GE3 [details] [associations]
symbol:UDT1 "Undeveloped tapetum 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0048656 "tapetal layer formation" evidence=IMP] [GO:0048658
"tapetal layer development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048656 EMBL:AY953870
STRING:Q58GE3 KEGG:dosa:Os07t0549600-01 Gramene:Q58GE3
HOGENOM:HOG000084429 Uniprot:Q58GE3
Length = 234
Score = 137 (53.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 32/100 (32%), Positives = 55/100 (55%)
Query: 461 GDVGGDPASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASIL 520
GD G + + + E + ++ AERRRR +LN LR++VP +TKM K + L
Sbjct: 41 GDDGEEEQQQQQAAAAAMGKEFKSKNLEAERRRRGRLNGNIFALRAVVPKITKMSKEATL 100
Query: 521 GDTIEYVKQLRKKIQDLESRNINNQILEGDQRSRSADGSK 560
D IE++K L+ ++ +L+ R + + E ++ SA S+
Sbjct: 101 SDAIEHIKNLQNEVLELQ-RQLGDSPGEAWEKQGSASCSE 139
>UNIPROTKB|Q6YW41 [details] [associations]
symbol:B1131G07.17 "Basic helix-loop-helix (BHLH) family
protein-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP005797 ProteinModelPortal:Q6YW41
Gramene:Q6YW41 HOGENOM:HOG000083084 Uniprot:Q6YW41
Length = 745
Score = 152 (58.6 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 34/89 (38%), Positives = 54/89 (60%)
Query: 478 PQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDL 537
P +H+++ERRRRE+LNE F LR L+P +K DKA++L T+EY+ L +I +L
Sbjct: 507 PPTSSQLHHMISERRRRERLNESFEHLRGLLPPGSKKDKATVLAKTLEYMNLLIAQISEL 566
Query: 538 ESRN--INNQILEGDQRSRSADGSKDQRV 564
E++N + QI QR+ + S+ +
Sbjct: 567 EAKNRALQTQI---HQRANGSSSSRSSMI 592
Score = 42 (19.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 374 EELTPEDTHYSQTISTILQKQPTRWAESS 402
E++ ED + +LQ PTR + SS
Sbjct: 262 EQVFSEDFFQQSLLEELLQLPPTRPSSSS 290
>TAIR|locus:2115080 [details] [associations]
symbol:SPT "AT4G36930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009908 "flower
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010114 "response
to red light" evidence=IMP] [GO:0010187 "negative regulation of
seed germination" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048440 "carpel development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007623 "circadian
rhythm" evidence=IEP] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0007623 GO:GO:0009409 GO:GO:0003700 GO:GO:0006351
GO:GO:0010114 GO:GO:0010187 GO:GO:0048440 GO:GO:0010154
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:Z99707 EMBL:AL161590 EMBL:AF319540
EMBL:AK229267 EMBL:BT026462 IPI:IPI00541204 PIR:B85436
RefSeq:NP_568010.1 UniGene:At.4639 ProteinModelPortal:Q9FUA4
SMR:Q9FUA4 IntAct:Q9FUA4 STRING:Q9FUA4 EnsemblPlants:AT4G36930.1
GeneID:829847 KEGG:ath:AT4G36930 TAIR:At4g36930 eggNOG:NOG276771
HOGENOM:HOG000090429 InParanoid:Q9FUA4 OMA:NAPEMIN PhylomeDB:Q9FUA4
ProtClustDB:CLSN2917674 Genevestigator:Q9FUA4 GermOnline:AT4G36930
Uniprot:Q9FUA4
Length = 373
Score = 142 (55.0 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 30/59 (50%), Positives = 43/59 (72%)
Query: 486 HVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLESRN-IN 543
H L+E+RRR ++NE+ L+SL+P K DKAS+L + IEY+KQL+ ++Q L RN IN
Sbjct: 202 HNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRNGIN 260
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 133 (51.9 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 32/88 (36%), Positives = 51/88 (57%)
Query: 460 LGDVGGDPASRFRKGTGTPQ-DEMSAN-----HVLAERRRREKLNERFIILRSLVPFVTK 513
+ + G D + K +G Q + + N H L+E++RR K+NE+ L+ L+P K
Sbjct: 66 VSETGQDKYAFEHKRSGAKQRNSLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNK 125
Query: 514 MDKASILGDTIEYVKQLRKKIQDLESRN 541
DKAS+L + IEY+KQL+ ++Q L N
Sbjct: 126 TDKASMLDEAIEYLKQLQLQVQTLAVMN 153
Score = 37 (18.1 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 88 PTRRPSAALSPEDLTESEWFYLMCVSFSFPSGVG 121
PT +PS+ +++ +E F+ VS S VG
Sbjct: 31 PTAQPSSPPKSTNVSSAETFF-PSVSGGAVSSVG 63
>UNIPROTKB|Q6ETQ5 [details] [associations]
symbol:P0613F08.25 "Basic helix-loop-helix-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP004801 ProteinModelPortal:Q6ETQ5
EnsemblPlants:LOC_Os02g15760.1 Gramene:Q6ETQ5 OMA:FRILETW
Uniprot:Q6ETQ5
Length = 415
Score = 142 (55.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 37/115 (32%), Positives = 64/115 (55%)
Query: 453 RDENSPKLGDVGGDPASRFRKGTGTPQDEMSA--------------NHVLAERRRREKLN 498
RDE G GG PA + +KG+ + +A +H+ ER RR+++N
Sbjct: 88 RDEEKGG-GGGGGPPAQKKQKGSSSSSSSPAALAAAVGDGDGAAKMSHITVERNRRKQMN 146
Query: 499 ERFIILRSLVP--FVTKMDKASILGDTIEYVKQLRKKIQDLESRNINNQILEGDQ 551
E +LRSL+P +V + D+ASI+G ++Y+K+L++ ++ LE++ N+ DQ
Sbjct: 147 EHLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLRSLEAKK--NRKAYADQ 199
>UNIPROTKB|Q7FA23 [details] [associations]
symbol:OSJNBa0058K23.6 "Os04g0618600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP008210
EMBL:CM000141 EMBL:AL662970 RefSeq:NP_001053893.1 UniGene:Os.4548
EnsemblPlants:LOC_Os04g52770.1 GeneID:4337015 KEGG:osa:4337015
eggNOG:NOG275283 OMA:RSAEFHN ProtClustDB:CLSN2695118 Uniprot:Q7FA23
Length = 181
Score = 128 (50.1 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 26/66 (39%), Positives = 43/66 (65%)
Query: 472 RKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLR 531
R+ T T + + H +ERRRR+++NE+ L+ L+P TK DK S+L + I+Y+K L+
Sbjct: 4 RRPTPTRRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQ 63
Query: 532 KKIQDL 537
++Q L
Sbjct: 64 LQLQML 69
>FB|FBgn0017578 [details] [associations]
symbol:Max "Max" species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=IC;ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AE014296 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0000122 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG239807 EMBL:U77369 EMBL:AY061014 EMBL:AY089690
EMBL:BT025211 RefSeq:NP_001246833.1 RefSeq:NP_649097.1
UniGene:Dm.3749 ProteinModelPortal:P91664 SMR:P91664 IntAct:P91664
MINT:MINT-977153 STRING:P91664 PRIDE:P91664
EnsemblMetazoa:FBtr0075018 EnsemblMetazoa:FBtr0310276 GeneID:40095
KEGG:dme:Dmel_CG9648 UCSC:CG9648-RA CTD:4149 FlyBase:FBgn0017578
GeneTree:ENSGT00530000064011 InParanoid:P91664 KO:K04453
OMA:TTECIQT OrthoDB:EOG480GD4 PhylomeDB:P91664 GenomeRNAi:40095
NextBio:816971 Bgee:P91664 GermOnline:CG9648 Uniprot:P91664
Length = 161
Score = 120 (47.3 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 43/128 (33%), Positives = 62/128 (48%)
Query: 454 DENSPKLGDVG-GDPASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVT 512
D S + GD G +SR Q E A+H ERRRR+ + E F LR VP +
Sbjct: 11 DIESDEDGDSDTGLGSSRHTNTANFTQAEKRAHHNALERRRRDHIKESFTNLREAVPTLK 70
Query: 513 --KMDKASILGDTIEYVKQLRKKI----QDLES-RNINNQILEGDQRSRSADGSKDQRVL 565
K +A IL T E ++ +R+KI +D+E + NN I + Q S++G + L
Sbjct: 71 GEKASRAQILKKTTECIQTMRRKISENQKDIEEIKRQNNIIAKQIQALESSNGDQFSEFL 130
Query: 566 DRNARVGS 573
+ VGS
Sbjct: 131 S-DEEVGS 137
>TAIR|locus:2053733 [details] [associations]
symbol:PIF4 "AT2G43010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA;IMP] [GO:0010161 "red light
signaling pathway" evidence=IGI] [GO:0009704 "de-etiolation"
evidence=IMP] [GO:0010600 "regulation of auxin biosynthetic
process" evidence=IDA] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009585 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0010161 GO:GO:0009704 GO:GO:0010928
EMBL:AC006224 EMBL:AJ440755 EMBL:AF251694 EMBL:AY142625
EMBL:AF360221 EMBL:EF193514 EMBL:EF193515 EMBL:EF193516
EMBL:EF193517 EMBL:EF193518 EMBL:EF193519 EMBL:EF193520
EMBL:EF193521 EMBL:EF193522 EMBL:EF193523 EMBL:EF193524
EMBL:EF193525 EMBL:EF193526 EMBL:EF193527 IPI:IPI00520232
IPI:IPI00534557 PIR:H84860 RefSeq:NP_565991.2 UniGene:At.19015
ProteinModelPortal:Q8W2F3 SMR:Q8W2F3 IntAct:Q8W2F3 STRING:Q8W2F3
EnsemblPlants:AT2G43010.1 GeneID:818903 KEGG:ath:AT2G43010
TAIR:At2g43010 eggNOG:NOG244119 InParanoid:Q8W2F3 KO:K16189
OMA:IRETEME PhylomeDB:Q8W2F3 ProtClustDB:CLSN2680212
Genevestigator:Q8W2F3 GermOnline:AT2G43010 GO:GO:0010600
Uniprot:Q8W2F3
Length = 430
Score = 143 (55.4 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 33/84 (39%), Positives = 54/84 (64%)
Query: 452 YRDENSPKLGDVGGDPASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFV 511
+ DE S L D G+ +++ R G+ + + H L+ERRRR+++NER L+ L+P
Sbjct: 231 HTDE-SVSLSDAIGNKSNQ-RSGSNR-RSRAAEVHNLSERRRRDRINERMKALQELIPHC 287
Query: 512 TKMDKASILGDTIEYVKQLRKKIQ 535
+K DKASIL + I+Y+K L+ ++Q
Sbjct: 288 SKTDKASILDEAIDYLKSLQLQLQ 311
Score = 43 (20.2 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 333 QQQRGDSHR-AESSRTWPMALQEPVMIGSSLQLPPSGQIPPEEELTPED--THYSQTIST 389
Q Q+ D H A S T+ + QE V S +Q PP E+ P+D +H+ T+
Sbjct: 49 QTQKQDHHEEALRSSTF-LEDQETV---SWIQYPPD-----EDPFEPDDFSSHFFSTMDP 99
Query: 390 ILQKQPT 396
+ ++PT
Sbjct: 100 L--QRPT 104
>TAIR|locus:2155543 [details] [associations]
symbol:HEC1 "HECATE 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010500 "transmitting tissue
development" evidence=IGI] [GO:0048462 "carpel formation"
evidence=IMP] [GO:0048445 "carpel morphogenesis" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:AF488618 EMBL:AK228927 IPI:IPI00530790
RefSeq:NP_201507.1 UniGene:At.28829 ProteinModelPortal:Q9FHA7
SMR:Q9FHA7 IntAct:Q9FHA7 EnsemblPlants:AT5G67060.1 GeneID:836841
KEGG:ath:AT5G67060 TAIR:At5g67060 eggNOG:NOG267961
HOGENOM:HOG000242863 InParanoid:Q9FHA7 OMA:FLFNSTH PhylomeDB:Q9FHA7
ProtClustDB:CLSN2684406 Genevestigator:Q9FHA7 GO:GO:0048462
GO:GO:0010500 Uniprot:Q9FHA7
Length = 241
Score = 135 (52.6 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 28/55 (50%), Positives = 40/55 (72%)
Query: 488 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLESRNI 542
+A R RRE+++ER IL+ LVP TKMD AS+L + I YVK L+K++Q LE + +
Sbjct: 135 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEEQAV 189
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 140 (54.3 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 28/76 (36%), Positives = 48/76 (63%)
Query: 472 RKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLR 531
+ T + +A H +ER+RR+K+N+R L+ LVP +K DKAS+L + IEY+KQL+
Sbjct: 204 KSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQ 263
Query: 532 KKIQDLESRNINNQIL 547
++ + N+ + +L
Sbjct: 264 AQVSMMSRMNMPSMML 279
>TAIR|locus:2158392 [details] [associations]
symbol:BHLH92 "AT5G43650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB016875 EMBL:AY065390 EMBL:AY096718 IPI:IPI00529613
RefSeq:NP_199178.1 UniGene:At.28504 ProteinModelPortal:Q9FIX5
SMR:Q9FIX5 PRIDE:Q9FIX5 EnsemblPlants:AT5G43650.1 GeneID:834385
KEGG:ath:AT5G43650 TAIR:At5g43650 eggNOG:NOG311504
HOGENOM:HOG000090799 InParanoid:Q9FIX5 OMA:QSYLALH PhylomeDB:Q9FIX5
ProtClustDB:CLSN2686830 Genevestigator:Q9FIX5 Uniprot:Q9FIX5
Length = 247
Score = 134 (52.2 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 27/69 (39%), Positives = 43/69 (62%)
Query: 472 RKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLR 531
+K T P+ E S H+L ER RREK + ++ L SL+PF TK DK SI+ ++ + +L+
Sbjct: 76 KKNTVAPEKERSRRHMLKERTRREKQKQSYLALHSLLPFATKNDKNSIVEKAVDEIAKLQ 135
Query: 532 KKIQDLESR 540
+ ++L R
Sbjct: 136 RLKKELVRR 144
>UNIPROTKB|Q8GRJ1 [details] [associations]
symbol:OJ1343_B12.103 "Transcription factor BHLH9-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP003824 EMBL:AP004010
Uniprot:Q8GRJ1
Length = 417
Score = 139 (54.0 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 32/88 (36%), Positives = 50/88 (56%)
Query: 448 LHSKYRDENSPKLGDVGGDPASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSL 507
L + R+E L +V D ++ + + H L+ERRRR+++NE+ L+ L
Sbjct: 196 LFKRGREELVDSLSEVA-DETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQEL 254
Query: 508 VPFVTKMDKASILGDTIEYVKQLRKKIQ 535
VP K DKASIL + IEY+K L+ ++Q
Sbjct: 255 VPHCNKTDKASILDEAIEYLKSLQMQVQ 282
>UNIPROTKB|Q7XKP5 [details] [associations]
symbol:OSJNBb0013O03.11 "OSJNBb0013O03.11 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 HOGENOM:HOG000006429 EMBL:AL731621
RefSeq:NP_001173851.1 UniGene:Os.98890
EnsemblPlants:LOC_Os04g23440.1 GeneID:9269507 KEGG:osa:9269507
OMA:NIAMERD Genevestigator:Q7XKP5 Uniprot:Q7XKP5
Length = 293
Score = 133 (51.9 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 43/140 (30%), Positives = 73/140 (52%)
Query: 450 SKYRDENSPKLGDVGGDPASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVP 509
S+Y D +SP D + + S+ ++ ER RR++LNE+ LR++VP
Sbjct: 69 SRYADSSSP-------DVVNLCSTAVASAAAAASSKNIAMERDRRKRLNEKLFALRAVVP 121
Query: 510 FVTKMDKASILGDTIEYVKQLRKKIQDLESRNINNQILEGDQRSRSADGSKDQRVLDRNA 569
+TKMDKASI+ D I ++++L++ E R + ++I Q + + + + V D
Sbjct: 122 KITKMDKASIVRDAIAHIEKLQE-----EERQLLDEI-SVLQSAAAVAATAVEDVDDSGV 175
Query: 570 RVGSGKRKLRK---VEGSGG 586
+ S K KLR ++G GG
Sbjct: 176 TMPSMK-KLRSTPPLDGGGG 194
Score = 44 (20.5 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 11/58 (18%), Positives = 24/58 (41%)
Query: 604 VQVSII-ESDALVELQCGNKEGLLLDIMQMLRELLIEVTAVQSFLTNGVFTAQLRAKV 660
+QVS + E V ++C G + + + L ++V + +G + +V
Sbjct: 234 LQVSKVGEKTVAVSIRCAKTRGAMAKVCHAVESLYLKVVSASVAAVDGTIVHTMFVEV 291
>TAIR|locus:2009537 [details] [associations]
symbol:AT1G22490 "AT1G22490" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009536
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006551
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
EMBL:AY088234 EMBL:AF488622 IPI:IPI00545534 PIR:B86358
RefSeq:NP_564171.1 UniGene:At.19247 ProteinModelPortal:Q9SK91
SMR:Q9SK91 EnsemblPlants:AT1G22490.1 GeneID:838855
KEGG:ath:AT1G22490 TAIR:At1g22490 eggNOG:NOG281753
InParanoid:Q8L9T3 OMA:ESHANIK PhylomeDB:Q9SK91
ProtClustDB:CLSN2679534 Genevestigator:Q9SK91 Uniprot:Q9SK91
Length = 304
Score = 136 (52.9 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 28/73 (38%), Positives = 45/73 (61%)
Query: 486 HVLAERRRREKLNERFIILRSLVP--FVTKMDKASILGDTIEYVKQLRKKIQDLESRNIN 543
H+ ER RR+++NE +LRSL+P + + D+ASI+G I YVK+L +Q +E +
Sbjct: 117 HIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEHILQSMEPKRTR 176
Query: 544 NQILEGDQRSRSA 556
+GD+ S S+
Sbjct: 177 THDPKGDKTSTSS 189
>UNIPROTKB|Q6Z339 [details] [associations]
symbol:B1121A12.20 "Os02g0726700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
EMBL:AP008208 EMBL:AP005284 RefSeq:NP_001047993.1 UniGene:Os.52592
GeneID:4330593 KEGG:osa:4330593 ProtClustDB:CLSN2919237
Uniprot:Q6Z339
Length = 344
Score = 137 (53.3 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 33/76 (43%), Positives = 46/76 (60%)
Query: 464 GGDPASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVT-KMDKASILGD 522
G AS +G TP+ + SA E+RRR K+N+R ILR L+P K DKAS L +
Sbjct: 132 GRSSASSADQGPSTPRSKHSAT----EQRRRTKINDRLEILRELLPHTDQKRDKASFLSE 187
Query: 523 TIEYVKQLRKKIQDLE 538
IEY++ L++K+Q E
Sbjct: 188 VIEYIRFLQEKVQKYE 203
>TAIR|locus:2164605 [details] [associations]
symbol:AT5G56960 "AT5G56960" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010200 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB024035 IPI:IPI00545938 RefSeq:NP_200506.1 UniGene:At.55597
ProteinModelPortal:Q9LTS4 SMR:Q9LTS4 EnsemblPlants:AT5G56960.1
GeneID:835798 KEGG:ath:AT5G56960 TAIR:At5g56960 eggNOG:NOG254434
HOGENOM:HOG000095216 InParanoid:Q9LTS4 OMA:RENATTH PhylomeDB:Q9LTS4
ProtClustDB:CLSN2687375 Genevestigator:Q9LTS4 Uniprot:Q9LTS4
Length = 466
Score = 145 (56.1 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 54/196 (27%), Positives = 85/196 (43%)
Query: 351 ALQEPVM--IGSSLQLPPSGQIPPEEELTPEDTHYSQTISTILQKQPTRWAESSYVTYSS 408
A+ PV+ + + P Q P E+ +Q I +L + + SS
Sbjct: 152 AVNVPVLPPLAPINMIHPQHQEPLFRNRQREEEAMTQAILAVLTGPSSPPSTSSSPQRKG 211
Query: 409 TQSAFAKWTDRSDHLLAVPVP-VEGTSQWVLKYVLFTVPYLHSKYR--DENSPKLGDVGG 465
+AF ++ P+P V S + ++ + R EN+ G+ G
Sbjct: 212 RATAFKRYYSMISDRGRAPLPSVRKQSMMTRAMSFYNRLNINQRERFTRENATTHGEGSG 271
Query: 466 DPASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIE 525
R +G ++ H+++ER+RREKLNE F LRSL+P TK DKAS+L E
Sbjct: 272 GSGGGGRYTSGPSATQLQ--HMISERKRREKLNESFQALRSLLPPGTKKDKASVLSIARE 329
Query: 526 YVKQLRKKIQDLESRN 541
+ L+ +I L RN
Sbjct: 330 QLSSLQGEISKLLERN 345
Score = 38 (18.4 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 38 LIWGDGYYNGAIKTRKTVQPMEVSAEEASLQRS 70
LI DGYYN A + +P S+ SL RS
Sbjct: 11 LISMDGYYNEASE-----EPSS-SSSSGSLARS 37
>UNIPROTKB|Q6ZGS3 [details] [associations]
symbol:OJ1148_D05.9 "Putative basic-helix-loop-helix
transcription factor" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CM000139 eggNOG:NOG262411 EMBL:AP004118
EnsemblPlants:LOC_Os02g46560.1 OMA:KRELATY Uniprot:Q6ZGS3
Length = 373
Score = 137 (53.3 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 34/91 (37%), Positives = 54/91 (59%)
Query: 486 HVLAERRRREKLNERFIILRSLVP--FVTKMDKASILGDTIEYVKQLRKKIQDLESRNIN 543
H+ ER RR ++NE ILRSL+P +V + D+ASI+G IE+VK+L +++Q LE++
Sbjct: 92 HIAVERNRRRQMNEYLAILRSLMPEPYVQRGDQASIVGGAIEFVKELEQQLQSLEAQK-- 149
Query: 544 NQILEGDQRSRSADGSKDQRVLDRNARVGSG 574
+ L ++R D + N VG+G
Sbjct: 150 -RTLLPHHKARCDDATPMHNASGSN--VGAG 177
>TAIR|locus:2042556 [details] [associations]
symbol:AT2G31210 "AT2G31210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC006593 Gene3D:4.10.280.10
SUPFAM:SSF47459 eggNOG:NOG254981 HOGENOM:HOG000083787
ProtClustDB:CLSN2716481 EMBL:AJ519809 EMBL:AK118441 EMBL:BT009675
IPI:IPI00540344 PIR:H84717 RefSeq:NP_180679.2 UniGene:At.38250
ProteinModelPortal:Q8GX46 SMR:Q8GX46 EnsemblPlants:AT2G31210.1
GeneID:817677 KEGG:ath:AT2G31210 TAIR:At2g31210 InParanoid:Q8GX46
OMA:ERERRCH PhylomeDB:Q8GX46 Genevestigator:Q8GX46 Uniprot:Q8GX46
Length = 428
Score = 138 (53.6 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 52/203 (25%), Positives = 93/203 (45%)
Query: 450 SKYRDENSPKLGDVGGDPASRF--RKGTGTPQDEMSANHVLAERRRREKLNERFIILRSL 507
S DEN+ D G S+ RKG G +++ ER RR LNER+ L+ L
Sbjct: 181 SNVGDENNNAQFDSGIIEFSKEIRRKGRGKRKNKPFTT----ERERRCHLNERYEALKLL 236
Query: 508 VPFVTKMDKASILGDTIEYVKQLRKKIQDLE---------SRNINNQILEGDQRSRSAD- 557
+P +K D+ASIL D I+Y+ +LR+++ +L+ R+ NN++ + + D
Sbjct: 237 IPSPSKGDRASILQDGIDYINELRRRVSELKYLVERKRCGGRHKNNEVDDNNNNKNLDDH 296
Query: 558 GSKDQRVLDRNARVGSGKRKLRKVEGSGGGXXXXXXXXXXXXXXTSVQVSIIESDALVEL 617
G++D D N K + ++ T V V I++ + +++
Sbjct: 297 GNEDDDDDDENMEK---KPESDVIDQCSSNNSLRCSWLQRKSKVTEVDVRIVDDEVTIKV 353
Query: 618 QCGNKEGLLLDIMQMLRELLIEV 640
K LL + ++L +L +++
Sbjct: 354 VQKKKINCLLLVSKVLDQLQLDL 376
>TAIR|locus:2082400 [details] [associations]
symbol:MUTE "AT3G06120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010374
"stomatal complex development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005739
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238962 EMBL:AC018907 GO:GO:0010374 EMBL:AF488580
EMBL:DQ863645 EMBL:DQ864972 EMBL:DQ446639 EMBL:DQ653068
IPI:IPI00548354 RefSeq:NP_187263.1 UniGene:At.40565
ProteinModelPortal:Q9M8K6 SMR:Q9M8K6 STRING:Q9M8K6
EnsemblPlants:AT3G06120.1 GeneID:819785 KEGG:ath:AT3G06120
TAIR:At3g06120 eggNOG:NOG271176 InParanoid:Q9M8K6 OMA:SHIAVER
PhylomeDB:Q9M8K6 ProtClustDB:CLSN2684638 Genevestigator:Q9M8K6
Uniprot:Q9M8K6
Length = 202
Score = 129 (50.5 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 25/58 (43%), Positives = 41/58 (70%)
Query: 485 NHVLAERRRREKLNERFIILRSLVP--FVTKMDKASILGDTIEYVKQLRKKIQDLESR 540
+H+ ER RR ++NE LRSL P ++ + D+ASI+G IE++K+L++ +Q LES+
Sbjct: 2 SHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESK 59
>TAIR|locus:4010713916 [details] [associations]
symbol:AT4G28815 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
PIR:H85335 PIR:T04518 EMBL:AJ577586 IPI:IPI00530422
RefSeq:NP_001078463.1 UniGene:At.71260 ProteinModelPortal:Q7XHI7
SMR:Q7XHI7 EnsemblPlants:AT4G28815.1 GeneID:5008171
KEGG:ath:AT4G28815 TAIR:At4g28815 eggNOG:NOG83291 PhylomeDB:Q7XHI7
Genevestigator:Q7XHI7 Uniprot:Q7XHI7
Length = 307
Score = 135 (52.6 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 30/63 (47%), Positives = 37/63 (58%)
Query: 472 RKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLR 531
R T + + H LAERRRREK+NER L+ L+P K K S+L D IEYVK L
Sbjct: 141 RGSTSRKRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEYVKSLE 200
Query: 532 KKI 534
+I
Sbjct: 201 MQI 203
>UNIPROTKB|Q8S0C6 [details] [associations]
symbol:B1112D09.6 "Uncharacterized protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000138
HSSP:P01106 EMBL:AP003432 EMBL:AK106333
EnsemblPlants:LOC_Os01g39330.1 eggNOG:NOG273636 OMA:LNDSFHT
Uniprot:Q8S0C6
Length = 454
Score = 138 (53.6 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 34/92 (36%), Positives = 53/92 (57%)
Query: 486 HVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLESRN--IN 543
H+++ER+RREKLN+ F LRSL+P +K DK ++L + +Y+K L +I +LE N +
Sbjct: 267 HMMSERKRREKLNDSFHTLRSLLPPCSKKDKTTVLINAAKYLKSLETEITELEGTNTKLE 326
Query: 544 NQILEGDQRSRSADGSKDQRVLDRNARVGSGK 575
I G +AD + R + A+V K
Sbjct: 327 KHIAGG---GGAADAAMRARRAQQRAKVQISK 355
>TAIR|locus:2042486 [details] [associations]
symbol:AT2G31220 "AT2G31220" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC006593 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT005711 EMBL:BT008608 EMBL:AK228592
EMBL:AF251695 IPI:IPI00521500 PIR:A84718 RefSeq:NP_180680.2
UniGene:At.28314 ProteinModelPortal:Q84TK1 SMR:Q84TK1
EnsemblPlants:AT2G31220.1 GeneID:817679 KEGG:ath:AT2G31220
TAIR:At2g31220 eggNOG:NOG254981 HOGENOM:HOG000083787
InParanoid:Q84TK1 OMA:NTKICEG PhylomeDB:Q84TK1
ProtClustDB:CLSN2716481 Genevestigator:Q84TK1 Uniprot:Q84TK1
Length = 458
Score = 138 (53.6 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 43/173 (24%), Positives = 77/173 (44%)
Query: 472 RKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLR 531
RKG G+ + S ER RR N+RF L++L+P TK+D+ASI+G+ I+Y+K+L
Sbjct: 238 RKGRGSRKSRTSPT----ERERRVHFNDRFFDLKNLIPNPTKIDRASIVGEAIDYIKELL 293
Query: 532 KKIQDLESRNINNQI--LEGDQRSRSADGS--KDQRVLDRNARVGSGKRKLRKVEGSGGG 587
+ I++ + + +R+R +G +DQ + +
Sbjct: 294 RTIEEFKMLVEKKRCGRFRSKKRARVGEGGGGEDQEEEEDTVNYKPQSEVDQSCFNKNNN 353
Query: 588 XXXXXXXXXXXXXXTSVQVSIIESDALVELQCGNKEGLLLDIMQMLRELLIEV 640
T V V II+ + ++L K LL ++L +L +++
Sbjct: 354 NSLRCSWLKRKSKVTEVDVRIIDDEVTIKLVQKKKINCLLFTTKVLDQLQLDL 406
>TAIR|locus:2178560 [details] [associations]
symbol:bHLH071 "AT5G46690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0007275 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
EMBL:AK221613 EMBL:BT025663 EMBL:AY087479 EMBL:AF488603
IPI:IPI00543871 RefSeq:NP_568666.1 UniGene:At.29935
ProteinModelPortal:Q56XR0 SMR:Q56XR0 IntAct:Q56XR0
EnsemblPlants:AT5G46690.1 GeneID:834712 KEGG:ath:AT5G46690
TAIR:At5g46690 eggNOG:NOG262411 InParanoid:Q56XR0 OMA:THANIRI
PhylomeDB:Q56XR0 ProtClustDB:CLSN2917741 Genevestigator:Q56XR0
Uniprot:Q56XR0
Length = 327
Score = 135 (52.6 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 30/80 (37%), Positives = 49/80 (61%)
Query: 486 HVLAERRRREKLNERFIILRSLVP--FVTKMDKASILGDTIEYVKQLRKKIQDLESRNIN 543
H+ ER RR ++N+ +LRSL+P F K D+ASI+G I+++K+L K+ LE++ +
Sbjct: 90 HIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELEHKLLSLEAQKHH 149
Query: 544 NQIL-EGDQRSRSADGSKDQ 562
N L + S S D + +Q
Sbjct: 150 NAKLNQSVTSSTSQDSNGEQ 169
>TAIR|locus:2163163 [details] [associations]
symbol:PIF7 "AT5G61270" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009416
"response to light stimulus" evidence=IDA] [GO:0009704
"de-etiolation" evidence=IMP] [GO:0016607 "nuclear speck"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016607
GO:GO:0003700 GO:GO:0006351 GO:GO:0003690 GO:GO:0009585
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB010073 HSSP:P22415
GO:GO:0009704 EMBL:AF488604 EMBL:BX831447 EMBL:AY568656
EMBL:AJ630484 EMBL:AK220640 IPI:IPI00537261 IPI:IPI00656604
RefSeq:NP_001032117.1 RefSeq:NP_200935.2 UniGene:At.29114
ProteinModelPortal:Q570R7 SMR:Q570R7 IntAct:Q570R7 STRING:Q570R7
EnsemblPlants:AT5G61270.1 GeneID:836248 KEGG:ath:AT5G61270
TAIR:At5g61270 eggNOG:NOG286182 HOGENOM:HOG000097081
InParanoid:Q9FLK6 OMA:HNESERR PhylomeDB:Q570R7
ProtClustDB:CLSN2681114 Genevestigator:Q570R7 Uniprot:Q570R7
Length = 366
Score = 135 (52.6 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 28/66 (42%), Positives = 46/66 (69%)
Query: 483 SANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLESR-N 541
+A H +ERRRR+++N+R L+ L+P +K DK SIL D IE++KQL+ ++Q + R N
Sbjct: 168 AAIHNESERRRRDRINQRMRTLQKLLPTASKADKVSILDDVIEHLKQLQAQVQFMSLRAN 227
Query: 542 INNQIL 547
+ Q++
Sbjct: 228 LPQQMM 233
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 141 (54.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 29/75 (38%), Positives = 49/75 (65%)
Query: 462 DVGGDPASRFRKGTGTPQDEMSAN-HVLAERRRREKLNERFIILRSLVPFVTKMDKASIL 520
D+ +P + GT + + +A H L+ERRRR+++NE+ L+ L+P K+DKAS+L
Sbjct: 292 DLDDEPGVLRKSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASML 351
Query: 521 GDTIEYVKQLRKKIQ 535
+ IEY+K L+ ++Q
Sbjct: 352 DEAIEYLKTLQLQVQ 366
Score = 42 (19.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 22/97 (22%), Positives = 38/97 (39%)
Query: 137 GANEVDSKTFSR-AILAKTVVCIPFLDGVVELGTTEKVPEDLALVQHVKSLFIDDHQGHL 195
G ++ FSR A+LA+ L+ T+ ++ V+S + G
Sbjct: 137 GEGVMNFSLFSRPAVLARAT-----LESAQRTQGTDNKASNVTASNRVESTVVQTASGPR 191
Query: 196 HPPKPALSEHSTSNPDTSSCHLRFHSQSMSPMCAAVN 232
P A + + + P + F S + +PM AVN
Sbjct: 192 SAPAFA-DQRAAAWPPQPK-EMPFASTAAAPMAPAVN 226
>UNIPROTKB|Q69JI7 [details] [associations]
symbol:OSJNBa0026C08.39-1 "BHLH protein family-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008215 EMBL:CM000146 EMBL:EU837261 EMBL:AP006169
EMBL:AP005759 RefSeq:NP_001063459.1 UniGene:Os.16741
EnsemblPlants:LOC_Os09g29930.1 GeneID:4347359 KEGG:osa:4347359
OMA:HNIVTSA ProtClustDB:CLSN2697427 Uniprot:Q69JI7
Length = 504
Score = 137 (53.3 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 31/69 (44%), Positives = 45/69 (65%)
Query: 474 GTGTPQDEMS--ANHVLAERRRREKLNERFIILRSLVPFVT-KMDKASILGDTIEYVKQL 530
G+GT Q S + H E+RRR K+N+RF ILR L+P K DKA+ L + IEY++ L
Sbjct: 208 GSGTDQRPSSPRSKHSATEQRRRSKINDRFQILRELLPHSDQKRDKATFLLEVIEYIRFL 267
Query: 531 RKKIQDLES 539
++K+Q E+
Sbjct: 268 QEKVQKFEA 276
Score = 46 (21.3 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 4 PPPSSRLQSILQEAVQSVQWTYSL 27
PPP+S+LQ Q+A T+S+
Sbjct: 62 PPPTSQLQQQQQQAFPGGIGTFSI 85
Score = 38 (18.4 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 118 SGVGLPGKAYARQQHVW 134
+GVG ARQQ W
Sbjct: 138 AGVGQVAATAARQQQEW 154
>TAIR|locus:2065086 [details] [associations]
symbol:AT2G40200 "AT2G40200" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AF085279 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488586 EMBL:BT029997 EMBL:BT030051
IPI:IPI00547467 PIR:E84826 RefSeq:NP_181549.1 UniGene:At.37090
ProteinModelPortal:Q9XEF0 SMR:Q9XEF0 EnsemblPlants:AT2G40200.1
GeneID:818611 KEGG:ath:AT2G40200 TAIR:At2g40200 eggNOG:NOG318931
HOGENOM:HOG000095217 InParanoid:Q9XEF0 OMA:QPETISD PhylomeDB:Q9XEF0
ProtClustDB:CLSN2913057 ArrayExpress:Q9XEF0 Genevestigator:Q9XEF0
Uniprot:Q9XEF0
Length = 254
Score = 130 (50.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 480 DEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKK 533
+ +S +H LAE+RRR+++N LR LVP K+DKA++L IE VK+L++K
Sbjct: 61 ESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQK 114
>TAIR|locus:2061634 [details] [associations]
symbol:PIL5 "phytochrome interacting factor 3-like 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0015995 "chlorophyll
biosynthetic process" evidence=IMP] [GO:0010187 "negative
regulation of seed germination" evidence=IGI;IMP] [GO:0010313
"phytochrome binding" evidence=IDA] [GO:0009959 "negative
gravitropism" evidence=IMP;TAS] [GO:0010029 "regulation of seed
germination" evidence=TAS] [GO:0010099 "regulation of
photomorphogenesis" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=IMP] [GO:0010161 "red
light signaling pathway" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0048608 "reproductive structure development" evidence=RCA]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010187 GO:GO:0006783 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30
GO:GO:0010161 EMBL:AC006081 HSSP:P61244 HOGENOM:HOG000240264
GO:GO:0015995 GO:GO:0010100 GO:GO:0009740 GO:GO:0009959
EMBL:AF488560 EMBL:AB103113 EMBL:AK228820 EMBL:BT029775
IPI:IPI00527244 IPI:IPI00537020 PIR:A84586 RefSeq:NP_001189559.1
RefSeq:NP_179608.2 RefSeq:NP_849996.1 UniGene:At.43003
UniGene:At.69322 ProteinModelPortal:Q8GZM7 SMR:Q8GZM7 IntAct:Q8GZM7
STRING:Q8GZM7 PRIDE:Q8GZM7 EnsemblPlants:AT2G20180.2
EnsemblPlants:AT2G20180.3 GeneID:816538 KEGG:ath:AT2G20180
TAIR:At2g20180 eggNOG:NOG264707 InParanoid:Q8GZM7 OMA:QEDEMTS
PhylomeDB:Q8GZM7 ProtClustDB:CLSN2690808 Genevestigator:Q8GZM7
GO:GO:0010313 Uniprot:Q8GZM7
Length = 478
Score = 135 (52.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 475 TGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKI 534
T T + + H L+ER+RR+++NER L+ L+P K DKAS+L + IEY+K L+ +I
Sbjct: 278 TSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQI 337
Query: 535 Q 535
Q
Sbjct: 338 Q 338
>UNIPROTKB|Q69MD0 [details] [associations]
symbol:OSJNBb0019B14.23 "BHLH-like protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP005755
ProteinModelPortal:Q69MD0 EnsemblPlants:LOC_Os09g28900.1
Gramene:Q69MD0 OMA:EMLGAEC Uniprot:Q69MD0
Length = 215
Score = 127 (49.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 485 NHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKK 533
+H AER+RRE++N LR LVP ++MDKA++LG+ + YV++LR +
Sbjct: 31 SHSEAERKRRERINAHLDTLRGLVPSASRMDKAALLGEVVRYVRKLRSE 79
>TAIR|locus:4010713915 [details] [associations]
symbol:AT4G28811 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
HOGENOM:HOG000240264 EMBL:AJ519811 IPI:IPI00518617 PIR:H85335
PIR:T04518 RefSeq:NP_001078462.1 UniGene:At.46149
ProteinModelPortal:Q8GT73 SMR:Q8GT73 PRIDE:Q8GT73
EnsemblPlants:AT4G28811.1 GeneID:5008170 KEGG:ath:AT4G28811
TAIR:At4g28811 eggNOG:NOG314238 PhylomeDB:Q8GT73
ProtClustDB:CLSN2699107 Genevestigator:Q8GT73 Uniprot:Q8GT73
Length = 544
Score = 134 (52.2 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 28/50 (56%), Positives = 36/50 (72%)
Query: 486 HVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQ 535
H L+ERRRRE++NER L+ L+P K DK S+L D IEYVK L+ +IQ
Sbjct: 362 HNLSERRRRERINERMKTLQELLPRCRKTDKVSMLEDVIEYVKSLQLQIQ 411
Score = 46 (21.3 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 27/103 (26%), Positives = 44/103 (42%)
Query: 4 PPPSSRLQSILQEAV-QSVQWTYSLFWQICPQQGILIWGDGYYNGAIKTRKTVQPMEVSA 62
PPP + + + E + +S Q S+ Q P + G G G +T + P+ S
Sbjct: 101 PPPIAPSEDDVVELLWKSGQVVQSIQTQR-PIPPPIFRGSGS-GGGEETVLPLPPLHPSH 158
Query: 63 EEASLQRSQQLRELYESL-----SAGETNQPTRRP--SAALSP 98
+ +Q + LY L S+G + RP SA+L+P
Sbjct: 159 QNIFIQEDEMASWLYHPLRQDYFSSGVASTSATRPQSSASLAP 201
Score = 44 (20.5 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 360 SSLQLPPSGQIPPEEELTPEDTHYS-QTISTILQKQP 395
SS+ LPP I P E+ E S Q + +I ++P
Sbjct: 94 SSVSLPPPPPIAPSEDDVVELLWKSGQVVQSIQTQRP 130
>TAIR|locus:2126624 [details] [associations]
symbol:LRL2 "AT4G30980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022198
EMBL:AL161578 HOGENOM:HOG000239571 GO:GO:0080147
ProtClustDB:CLSN2683027 EMBL:AF488601 IPI:IPI00524968 PIR:G85362
RefSeq:NP_194827.2 UniGene:At.31786 ProteinModelPortal:Q8S3D5
SMR:Q8S3D5 EnsemblPlants:AT4G30980.1 GeneID:829223
KEGG:ath:AT4G30980 TAIR:At4g30980 eggNOG:NOG295725
InParanoid:O65552 OMA:GGSHENT PhylomeDB:Q8S3D5
Genevestigator:Q8S3D5 Uniprot:Q8S3D5
Length = 310
Score = 130 (50.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 35/95 (36%), Positives = 49/95 (51%)
Query: 467 PASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEY 526
P R R+G T H +AER RRE++ ER L+ LVP K DKAS+L + I+Y
Sbjct: 128 PKVRARRGQATDP------HSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDY 181
Query: 527 VKQLRKKIQDLESRNINNQILEGDQRSRSADGSKD 561
VK L+ +++ L + Q S A GS +
Sbjct: 182 VKFLQLQVKVLSMSRLGGAASASSQISEDAGGSHE 216
>TAIR|locus:2012393 [details] [associations]
symbol:AT1G68810 "AT1G68810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC011914 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AY072161 EMBL:AY122983
IPI:IPI00517468 PIR:H96712 RefSeq:NP_564944.1 UniGene:At.46879
HSSP:P22415 ProteinModelPortal:Q9S7Y1 SMR:Q9S7Y1
EnsemblPlants:AT1G68810.1 GeneID:843213 KEGG:ath:AT1G68810
TAIR:At1g68810 eggNOG:NOG328059 HOGENOM:HOG000243133
InParanoid:Q9S7Y1 OMA:FVIKASL PhylomeDB:Q9S7Y1
ProtClustDB:CLSN2689090 Genevestigator:Q9S7Y1 Uniprot:Q9S7Y1
Length = 368
Score = 136 (52.9 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 26/60 (43%), Positives = 41/60 (68%)
Query: 483 SANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLESRNI 542
S +H AERRRRE++N LRS++P TK DKAS+L + I++VK+L+++ + N+
Sbjct: 175 SKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELKRETSVISETNL 234
Score = 38 (18.4 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 188 IDDHQGHLHPPKPALSEHSTSNPDTSSCHLRFHSQSMSPM 227
I H H H P SE ++ + S F S+SP+
Sbjct: 35 ISHHHHHHHDPSQ--SETLGASGNVGSGFTIFSQDSVSPI 72
>UNIPROTKB|Q6ESL3 [details] [associations]
symbol:OJ1294_G06.8 "DNA binding protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005093 ProteinModelPortal:Q6ESL3
EnsemblPlants:LOC_Os09g24490.1 KEGG:dosa:Os09t0410700-00
Gramene:Q6ESL3 OMA:RRHECIA Uniprot:Q6ESL3
Length = 363
Score = 131 (51.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 26/51 (50%), Positives = 38/51 (74%)
Query: 483 SANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKK 533
S +H AERRRR+++N LRSL+P TK DKAS+L + IE+VK+L+++
Sbjct: 107 SRSHSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKELKRQ 157
>UNIPROTKB|Q5KQG3 [details] [associations]
symbol:OSJNBb0086G17.12 "Putative uncharacterized protein
OSJNBb0086G17.12" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 OMA:SHIAVER EMBL:AC144455
ProteinModelPortal:Q5KQG3 EnsemblPlants:LOC_Os05g51820.1
Gramene:Q5KQG3 Uniprot:Q5KQG3
Length = 227
Score = 126 (49.4 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 23/63 (36%), Positives = 42/63 (66%)
Query: 485 NHVLAERRRREKLNERFIILRSLVP--FVTKMDKASILGDTIEYVKQLRKKIQDLESRNI 542
+H+ ER RR ++N+ +LRSL P ++ + D+ASI+G I+++K+L+ +Q LE++
Sbjct: 2 SHIAVERNRRRQMNDHLKVLRSLTPAFYIKRGDQASIIGGAIDFIKELQTLLQSLEAQKK 61
Query: 543 NNQ 545
Q
Sbjct: 62 RRQ 64
>UNIPROTKB|Q67TR8 [details] [associations]
symbol:B1342C04.6 "Basic helix-loop-helix (BHLH)-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP005655 EMBL:AP006057
EMBL:AK060477 EMBL:AK070458 RefSeq:NP_001063357.1 UniGene:Os.51063
EnsemblPlants:LOC_Os09g28210.1 GeneID:4347252 KEGG:osa:4347252
OMA:AYPAFHA ProtClustDB:CLSN2697769 Uniprot:Q67TR8
Length = 236
Score = 126 (49.4 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 488 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLE 538
+A R RRE+++ER IL+ LVP TKMD AS+L + I YVK L+ ++Q LE
Sbjct: 154 VAARLRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKSQVQSLE 204
>UNIPROTKB|Q6YTU1 [details] [associations]
symbol:P0419H09.4 "cDNA clone:002-131-D10, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:AP004213
EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238962 EMBL:HQ858861 EMBL:AP005918 EMBL:AK107626
RefSeq:NP_001062077.1 UniGene:Os.55174
EnsemblPlants:LOC_Os08g37730.1 GeneID:4345867 KEGG:osa:4345867
eggNOG:NOG250596 ProtClustDB:CLSN2919896 Uniprot:Q6YTU1
Length = 363
Score = 130 (50.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 25/56 (44%), Positives = 40/56 (71%)
Query: 486 HVLAERRRREKLNERFIILRSLVP--FVTKMDKASILGDTIEYVKQLRKKIQDLES 539
H+ ER RR+++NE +LRSL+P +V + D+ASI+G I YVK++ + +Q LE+
Sbjct: 142 HIAVERNRRKQMNEYLAVLRSLMPASYVQRGDQASIIGGAINYVKEMEQLLQSLEA 197
>UNIPROTKB|Q6Z9R3 [details] [associations]
symbol:P0461F06.33 "BHLH protein family-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000145
eggNOG:NOG315110 EMBL:AP004693 EnsemblPlants:LOC_Os08g36740.1
OMA:SAMREMI Uniprot:Q6Z9R3
Length = 246
Score = 126 (49.4 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 488 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLE 538
+A R RRE+++ER IL+ LVP TKMD AS+L + I YVK L+ ++Q LE
Sbjct: 164 VAARMRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 214
>TAIR|locus:2077680 [details] [associations]
symbol:PIL6 "AT3G59060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0009693
"ethylene biosynthetic process" evidence=IMP] [GO:0010600
"regulation of auxin biosynthetic process" evidence=IDA]
[GO:0010928 "regulation of auxin mediated signaling pathway"
evidence=IDA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=RCA] [GO:0006546 "glycine catabolic process" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0006733 "oxidoreduction coenzyme metabolic
process" evidence=RCA] [GO:0006766 "vitamin metabolic process"
evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009684
"indoleacetic acid biosynthetic process" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010017 "red or far-red
light signaling pathway" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019748 "secondary metabolic process"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009693 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL163527 GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240264 HSSP:P22415 GO:GO:0010928
ProtClustDB:CLSN2680212 GO:GO:0010600 EMBL:AF488598 EMBL:AB103112
EMBL:AY081271 EMBL:BT000049 IPI:IPI00541791 IPI:IPI00543835
IPI:IPI00890365 PIR:T47788 RefSeq:NP_001030889.1
RefSeq:NP_001030890.1 RefSeq:NP_191465.3 RefSeq:NP_851021.1
UniGene:At.43437 UniGene:At.67329 ProteinModelPortal:Q84LH8
SMR:Q84LH8 IntAct:Q84LH8 STRING:Q84LH8 EnsemblPlants:AT3G59060.2
EnsemblPlants:AT3G59060.3 EnsemblPlants:AT3G59060.4 GeneID:825075
KEGG:ath:AT3G59060 TAIR:At3g59060 eggNOG:NOG259206
InParanoid:Q84LH8 OMA:SHCGSNQ PhylomeDB:Q84LH8
Genevestigator:Q84LH8 Uniprot:Q84LH8
Length = 444
Score = 137 (53.3 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 29/71 (40%), Positives = 49/71 (69%)
Query: 465 GDPASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTI 524
G+ +S+ R G+ T + + H L+ERRRR+++NER L+ L+P ++ DKASIL + I
Sbjct: 242 GNKSSQ-RSGS-TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAI 299
Query: 525 EYVKQLRKKIQ 535
+Y+K L+ ++Q
Sbjct: 300 DYLKSLQMQLQ 310
Score = 38 (18.4 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 5/20 (25%), Positives = 11/20 (55%)
Query: 313 NLDSDFHLLAVSQGVNPADD 332
N + +FH+ + + P D+
Sbjct: 9 NFEDNFHMSTNKRSIRPEDE 28
>UNIPROTKB|Q9FTQ1 [details] [associations]
symbol:P0665D10.21 "DNA binding protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:AP002861 EMBL:AP002745 RefSeq:NP_001042409.1 UniGene:Os.26488
STRING:Q9FTQ1 GeneID:4324583 KEGG:osa:4324583 OMA:VRFTFLI
ProtClustDB:CLSN2691217 Uniprot:Q9FTQ1
Length = 267
Score = 120 (47.3 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 25/64 (39%), Positives = 42/64 (65%)
Query: 472 RKGTGTPQDEMSA----NHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYV 527
++ G ++E +A +H AERRRRE++N LR++VP KMDKA++L + + +V
Sbjct: 64 KRNCGGGREEKAAMALKSHSEAERRRRERINAHLATLRTMVPCTDKMDKAALLAEVVGHV 123
Query: 528 KQLR 531
K+L+
Sbjct: 124 KKLK 127
Score = 47 (21.6 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 12/66 (18%), Positives = 26/66 (39%)
Query: 617 LQCGNKEGLLLDIMQMLRELLIEVTAVQSFLTNGVFTAQLRAKVKDNVNGKKASIVEVKR 676
L C ++ L +D+ + L+ L +EV + G A++ V+
Sbjct: 168 LSCDDRADLFVDVKRALQPLGLEVVGSEVTTLGGRVRLAFLVSCGSRGGAAAAAMASVRH 227
Query: 677 AINQII 682
A+ ++
Sbjct: 228 ALQSVL 233
>TAIR|locus:2085964 [details] [associations]
symbol:BHLH32 "AT3G25710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0016036 "cellular response to phosphate
starvation" evidence=IMP] [GO:0080147 "root hair cell development"
evidence=IMP] [GO:0048364 "root development" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AB028607
GO:GO:0003677 GO:GO:0009718 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0016036
HOGENOM:HOG000243133 ProtClustDB:CLSN2689090 EMBL:DQ205679
EMBL:AY058840 EMBL:AY079033 EMBL:AY086383 EMBL:AF488571
IPI:IPI00523379 RefSeq:NP_189199.1 UniGene:At.22148
ProteinModelPortal:Q9LS08 SMR:Q9LS08 IntAct:Q9LS08 STRING:Q9LS08
PRIDE:Q9LS08 EnsemblPlants:AT3G25710.1 GeneID:822159
KEGG:ath:AT3G25710 TAIR:At3g25710 eggNOG:NOG304577 OMA:RERINTH
PhylomeDB:Q9LS08 Genevestigator:Q9LS08 GO:GO:0080147 Uniprot:Q9LS08
Length = 344
Score = 128 (50.1 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 24/55 (43%), Positives = 39/55 (70%)
Query: 483 SANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDL 537
S +H AERRRRE++N LRS++P TK DKAS+L + I+++K+L+++ +
Sbjct: 133 SKSHSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQHMKELKRQTSQI 187
>UNIPROTKB|Q7XLY9 [details] [associations]
symbol:OSJNBa0086O06.20 "OSJNBa0086O06.20 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL662981 UniGene:Os.52382 HOGENOM:HOG000238962
ProteinModelPortal:Q7XLY9 EnsemblPlants:LOC_Os04g50090.1
Gramene:Q7XLY9 OMA:RFFTYPQ Uniprot:Q7XLY9
Length = 362
Score = 128 (50.1 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 25/57 (43%), Positives = 41/57 (71%)
Query: 486 HVLAERRRREKLNERFIILRSLVP--FVTKMDKASILGDTIEYVKQLRKKIQDLESR 540
H+ ER RR ++NE +LRSL+P +V + D+ASI+G I++VK+L + +Q LE++
Sbjct: 97 HIAVERNRRRQMNEYLAVLRSLMPESYVHRGDQASIVGGAIDFVKELEQLLQSLEAQ 153
>UNIPROTKB|Q2QMV9 [details] [associations]
symbol:LOC_Os12g39850 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
KEGG:dosa:Os12t0589000-00 OMA:DESEMMA Uniprot:Q2QMV9
Length = 304
Score = 126 (49.4 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 31/84 (36%), Positives = 49/84 (58%)
Query: 456 NSPKLGDVGGDPASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMD 515
+S ++ D G + R G G D S L R+RRE++NER L++LVP TK+D
Sbjct: 201 SSQEVADAGATSKGKSRAGRGAATDPQS----LYARKRRERINERLKTLQNLVPNGTKVD 256
Query: 516 KASILGDTIEYVKQLRKKIQDLES 539
+++L + + YVK L+ +I+ L S
Sbjct: 257 ISTMLEEAVHYVKFLQLQIKLLSS 280
>UNIPROTKB|Q6ZA99 [details] [associations]
symbol:P0431A03.9 "Os08g0432800 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:AP008214 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP004666 EMBL:AK109616 RefSeq:NP_001061870.1
UniGene:Os.56209 EnsemblPlants:LOC_Os08g33590.1 GeneID:4345648
KEGG:osa:4345648 eggNOG:NOG311977 OMA:TSAMMED
ProtClustDB:CLSN2697339 Uniprot:Q6ZA99
Length = 345
Score = 131 (51.2 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 26/51 (50%), Positives = 38/51 (74%)
Query: 483 SANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKK 533
S +H AERRRR+++N LRSL+P TK DKAS+L + IE+VK+L+++
Sbjct: 122 SRSHSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKELKRQ 172
Score = 38 (18.4 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 6/11 (54%), Positives = 9/11 (81%)
Query: 1 MDAPPPSSRLQ 11
M+APPP + +Q
Sbjct: 71 MEAPPPMTMMQ 81
>TAIR|locus:2205455 [details] [associations]
symbol:BIM2 "AT1G69010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC011665 EMBL:BT002352 EMBL:AY080650 EMBL:AY086798
EMBL:AF488627 IPI:IPI00519398 PIR:E96714 RefSeq:NP_177064.1
UniGene:At.35458 ProteinModelPortal:Q9CAA4 SMR:Q9CAA4 PaxDb:Q9CAA4
PRIDE:Q9CAA4 EnsemblPlants:AT1G69010.1 GeneID:843233
KEGG:ath:AT1G69010 TAIR:At1g69010 eggNOG:NOG246683
HOGENOM:HOG000070523 InParanoid:Q9CAA4 OMA:YVQYLQE PhylomeDB:Q9CAA4
ProtClustDB:CLSN2682349 Genevestigator:Q9CAA4 GermOnline:AT1G69010
Uniprot:Q9CAA4
Length = 311
Score = 126 (49.4 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 484 ANHVLAERRRREKLNERFIILRSLVP-FVTKMDKASILGDTIEYVKQLRKKIQDLE 538
+ H + E+RRR K+NERF ILR L+P K D AS L + I+YV+ L++K+Q E
Sbjct: 48 SKHSVTEQRRRSKINERFQILRELIPNSEQKRDTASFLLEVIDYVQYLQEKVQKYE 103
>UNIPROTKB|Q5MP56 [details] [associations]
symbol:BA1 "Uncharacterized protein" species:4577 "Zea
mays" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY683001 EMBL:AY683002
EMBL:BT062649 RefSeq:NP_001105271.1 UniGene:Zm.18382 IntAct:Q5MP56
GeneID:542186 KEGG:zma:542186 HOGENOM:HOG000238432 OMA:MLEQAIH
Uniprot:Q5MP56
Length = 219
Score = 122 (48.0 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 33/78 (42%), Positives = 44/78 (56%)
Query: 460 LGDV---GGDPASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDK 516
LGD GG +R R G D S +A R RR ++++RF +LRSLVP +KMD
Sbjct: 32 LGDSRVRGGGSGARRRPGAKLSTDPQS----VAARERRHRISDRFRVLRSLVPGGSKMDT 87
Query: 517 ASILGDTIEYVKQLRKKI 534
S+L I YVK L+ +I
Sbjct: 88 VSMLEQAIHYVKFLKTQI 105
>UNIPROTKB|Q84T08 [details] [associations]
symbol:OSJNBa0087C10.10 "BHLH transcription factor,
putative, expressed" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC108906 RefSeq:NP_001051605.1
UniGene:Os.33544 STRING:Q84T08 EnsemblPlants:LOC_Os03g58830.1
GeneID:4334471 KEGG:osa:4334471 OMA:GTSTSEW ProtClustDB:CLSN2694415
Uniprot:Q84T08
Length = 265
Score = 124 (48.7 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 40/105 (38%), Positives = 58/105 (55%)
Query: 450 SKYRDENSPKLGDVGGDPAS-RFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLV 508
SK D+N P D R R+G T +H LAER RREK++ER IL+ LV
Sbjct: 116 SKSGDQNPPPPEPPKQDYIHVRARRGQATD------SHSLAERARREKISERMKILQDLV 169
Query: 509 PFVTKM-DKASILGDTIEYVKQLRKKIQ----DLESRN--INNQI 546
P K+ KAS+L + I Y++ L+++++ LE+ N +NN I
Sbjct: 170 PGCNKVIGKASVLDEIINYIQALQRQVEFLSMKLEAVNAHVNNGI 214
>TAIR|locus:504956068 [details] [associations]
symbol:AT2G31215 "AT2G31215" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002685 GO:GO:0003700 Gene3D:4.10.280.10 SUPFAM:SSF47459
IPI:IPI00519006 RefSeq:NP_850161.1 UniGene:At.52991
ProteinModelPortal:F4IQQ9 SMR:F4IQQ9 EnsemblPlants:AT2G31215.1
GeneID:817678 KEGG:ath:AT2G31215 PhylomeDB:F4IQQ9 Uniprot:F4IQQ9
Length = 129
Score = 105 (42.0 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 24/69 (34%), Positives = 40/69 (57%)
Query: 470 RFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQ 529
RF+ G + + L ER RR N+RF L++L+P TK +ASI+ D I Y+ +
Sbjct: 10 RFKAEEG--KGSKKSRTFLTERERRALFNDRFFDLKNLIPNPTKGGEASIVQDGIVYINE 67
Query: 530 LRKKIQDLE 538
L++ + +L+
Sbjct: 68 LQRLVSELK 76
>TAIR|locus:2044387 [details] [associations]
symbol:AT2G46810 "AT2G46810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005310 HOGENOM:HOG000238962 ProtClustDB:CLSN2683564
EMBL:AF488602 IPI:IPI00528766 PIR:T02682 RefSeq:NP_182204.1
UniGene:At.36451 ProteinModelPortal:O81037 SMR:O81037
EnsemblPlants:AT2G46810.1 GeneID:819294 KEGG:ath:AT2G46810
TAIR:At2g46810 eggNOG:NOG256546 InParanoid:O81037 OMA:KPWELEN
PhylomeDB:O81037 Genevestigator:O81037 Uniprot:O81037
Length = 371
Score = 126 (49.4 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 35/103 (33%), Positives = 59/103 (57%)
Query: 486 HVLAERRRREKLNERFIILRSLVP--FVTKMDKASILGDTIEYVKQLRKKIQDLESRNIN 543
H+ ER RR ++N LRS++P ++ + D+ASI+G I++VK L +++Q LE++
Sbjct: 195 HIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQQLQSLEAQ--- 251
Query: 544 NQILEGDQRSRSADGSKDQRVLDRNAR-VGSGK-RKLRKVEGS 584
+RS+ +D +K+Q D + R + S K R K E S
Sbjct: 252 -------KRSQQSDDNKEQIPEDNSLRNISSNKLRASNKEEQS 287
>UNIPROTKB|Q7F7Z2 [details] [associations]
symbol:Os01g0159800 "ESTs C26093(C11622)" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:CM000138 OMA:QPETISD ProtClustDB:CLSN2691085 EMBL:AP002539
RefSeq:NP_001042087.1 UniGene:Os.1443
EnsemblPlants:LOC_Os01g06640.1 EnsemblPlants:LOC_Os01g06640.2
GeneID:4324065 KEGG:osa:4324065 Uniprot:Q7F7Z2
Length = 258
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 467 PASRFRKGTGTPQDEMSAN--HVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTI 524
P G+G E A H AERRRRE++N LR ++P +MDKA++L +
Sbjct: 48 PEMSSSSGSGRSATEARALKIHSEAERRRRERINAHLTTLRRMIPDTKQMDKATLLARVV 107
Query: 525 EYVKQLRKKIQDLESR 540
+ VK L++K ++ R
Sbjct: 108 DQVKDLKRKASEITQR 123
>UNIPROTKB|Q6ZBQ2 [details] [associations]
symbol:P0605H02.26 "BHLH protein family-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 ProtClustDB:CLSN2697427 EMBL:HQ858865 EMBL:AP004620
EMBL:AK100183 RefSeq:NP_001062109.1 UniGene:Os.5093 STRING:Q6ZBQ2
EnsemblPlants:LOC_Os08g38210.1 GeneID:4345899 KEGG:osa:4345899
OMA:KPTHDFL Uniprot:Q6ZBQ2
Length = 508
Score = 127 (49.8 bits), Expect = 0.00012, P = 0.00012
Identities = 28/66 (42%), Positives = 41/66 (62%)
Query: 474 GTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVT-KMDKASILGDTIEYVKQLRK 532
GT + + H E+RRR K+N+RF +LR L+P K DKAS L + IEY++ L++
Sbjct: 214 GTDQMPNTPRSKHSATEQRRRSKINDRFQLLRDLLPHNDQKRDKASFLLEVIEYIRFLQE 273
Query: 533 KIQDLE 538
K+Q E
Sbjct: 274 KVQKYE 279
>TAIR|locus:2144791 [details] [associations]
symbol:HEC3 "AT5G09750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB020752
EMBL:AL353994 GO:GO:0048462 GO:GO:0010500 IPI:IPI00522404
PIR:T49923 RefSeq:NP_196537.1 UniGene:At.65500
ProteinModelPortal:Q9LXD8 SMR:Q9LXD8 IntAct:Q9LXD8 STRING:Q9LXD8
EnsemblPlants:AT5G09750.1 GeneID:830835 KEGG:ath:AT5G09750
TAIR:At5g09750 eggNOG:NOG238444 HOGENOM:HOG000210013
InParanoid:Q9LXD8 OMA:NDPIGMA ProtClustDB:CLSN2916890
Genevestigator:Q9LXD8 Uniprot:Q9LXD8
Length = 224
Score = 120 (47.3 bits), Expect = 0.00012, P = 0.00012
Identities = 30/72 (41%), Positives = 44/72 (61%)
Query: 488 LAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLESRNINNQIL 547
+A R RRE+++ER IL+ LVP TKMD AS+L + I YVK L+++I+ L +
Sbjct: 132 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLNNNTGYTPPP 191
Query: 548 EGDQRSRSADGS 559
DQ S++ S
Sbjct: 192 PQDQASQAVTTS 203
>UNIPROTKB|Q69Y51 [details] [associations]
symbol:P0698A06.26-2 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP003514
ProteinModelPortal:Q69Y51 EnsemblPlants:LOC_Os06g09370.3
Gramene:Q69Y51 HOGENOM:HOG000241730 Uniprot:Q69Y51
Length = 401
Score = 125 (49.1 bits), Expect = 0.00014, P = 0.00014
Identities = 33/82 (40%), Positives = 46/82 (56%)
Query: 456 NSPKLGDVGGDPASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMD 515
NS P +R R+G T H +AER RREK++ER L+ LVP K D
Sbjct: 226 NSAPGNSANAKPRTRARRGQATDP------HSIAERLRREKISERMKNLQVLVPNSNKAD 279
Query: 516 KASILGDTIEYVKQLRKKIQDL 537
KAS+L + I+YVK L+ +++ L
Sbjct: 280 KASMLDEIIDYVKFLQLQVKVL 301
>UNIPROTKB|Q75M33 [details] [associations]
symbol:P0668H12.5 "BHLH transcription factor" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000142 EMBL:AC084818 EMBL:AC073405 EMBL:HQ858853
EMBL:AK065864 RefSeq:NP_001054390.1 UniGene:Os.23082
EnsemblPlants:LOC_Os05g01256.1 EnsemblPlants:LOC_Os05g01256.2
GeneID:4337537 KEGG:osa:4337537 eggNOG:NOG296531 Uniprot:Q75M33
Length = 339
Score = 123 (48.4 bits), Expect = 0.00017, P = 0.00017
Identities = 41/135 (30%), Positives = 71/135 (52%)
Query: 408 STQSAFAKWTDRSDHLLAVPVPVEGTSQWVLKYVLFTVPYLHSKYRDENSPKLGDV-GGD 466
STQ A W H + V ++G + + V+ LH ++ D+ K + GG+
Sbjct: 120 STQDMDASWGKSRKHKRS-NVGLKGLEEKKARRVV-----LH-QHDDDVKKKAKEAAGGE 172
Query: 467 PASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMD-KASILGDTIE 525
P + + + + + +H LAER RREK++ER +L+SLVP K+ KA +L + I
Sbjct: 173 PPAGYIH-VRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIIS 231
Query: 526 YVKQLRKKIQDLESR 540
YV+ L+ +++ L +
Sbjct: 232 YVQSLQNQVEFLSMK 246
>TAIR|locus:2047555 [details] [associations]
symbol:LRL1 "AT2G24260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005967
HOGENOM:HOG000239571 GO:GO:0080147 EMBL:AF488599 EMBL:AK176370
EMBL:AK176390 EMBL:BT026512 IPI:IPI00528969 PIR:E84634
RefSeq:NP_180003.1 UniGene:At.20792 ProteinModelPortal:Q9ZUG9
SMR:Q9ZUG9 EnsemblPlants:AT2G24260.1 GeneID:816961
KEGG:ath:AT2G24260 TAIR:At2g24260 eggNOG:NOG284260
InParanoid:Q9ZUG9 OMA:STATCHS PhylomeDB:Q9ZUG9
ProtClustDB:CLSN2683027 Genevestigator:Q9ZUG9 Uniprot:Q9ZUG9
Length = 350
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 38/101 (37%), Positives = 50/101 (49%)
Query: 461 GDVGGDPASR--FRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKAS 518
G V P SR R G D H +AER RRE++ ER L+ LVP K DKAS
Sbjct: 126 GTVAAPPQSRTKIRARRGQATDP----HSIAERLRRERIAERMKALQELVPNGNKTDKAS 181
Query: 519 ILGDTIEYVKQLRKKIQDLESRNINNQILEGDQRSRSADGS 559
+L + I+YVK L+ +++ L + Q S A GS
Sbjct: 182 MLDEIIDYVKFLQLQVKVLSMSRLGGAASVSSQISE-AGGS 221
>TAIR|locus:2038510 [details] [associations]
symbol:AT1G06170 "AT1G06170" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P61244 HOGENOM:HOG000083787 ProtClustDB:CLSN2716481
EMBL:AF488619 EMBL:AC025290 EMBL:BT004262 IPI:IPI00518401
PIR:C86197 RefSeq:NP_172107.1 RefSeq:NP_973769.1 UniGene:At.42353
ProteinModelPortal:Q9LND0 SMR:Q9LND0 EnsemblPlants:AT1G06170.1
EnsemblPlants:AT1G06170.2 GeneID:837126 KEGG:ath:AT1G06170
TAIR:At1g06170 eggNOG:NOG264433 InParanoid:Q9LND0 OMA:YASAIAD
PhylomeDB:Q9LND0 Genevestigator:Q9LND0 Uniprot:Q9LND0
Length = 420
Score = 124 (48.7 bits), Expect = 0.00019, P = 0.00019
Identities = 49/215 (22%), Positives = 96/215 (44%)
Query: 472 RKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLR 531
RKG G+ + ++ ER RR +RF L++L+P TK D+ASI+G+ I+Y+K+L
Sbjct: 207 RKGRGSKKRKIFPT----ERERRVHFKDRFGDLKNLIPNPTKNDRASIVGEAIDYIKELL 262
Query: 532 KKIQDLESRNINNQILEGDQRSRSADGSKDQRVLDRNARVGSGKRKLRKVEGSGGGXXXX 591
+ I + + ++ QR+R D V+D N + S + +
Sbjct: 263 RTIDEFKLLVEKKRV---KQRNREGDD-----VVDENFKAQSEVVEQCLINKKNNALRCS 314
Query: 592 XXXXXXXXXXTSVQVSIIESDALVELQCGNKEGLLLDIMQMLRELLIEVTAVQSFLTNGV 651
T V V II+ + +++ K LL + +++ +L +++ V
Sbjct: 315 WLKRKSKF--TDVDVRIIDDEVTIKIVQKKKINCLLFVSKVVDQLELDLHHVAGAQIGEH 372
Query: 652 FTAQLRAKVKDNVNGKKASIVEVKRAINQIIPQYV 686
+ AK+ + + ++I + R + + QY+
Sbjct: 373 HSFLFNAKISEGSSVYASAIAD--RVMEVLKKQYM 405
>TAIR|locus:2168235 [details] [associations]
symbol:AT5G65320 "AT5G65320" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB011479 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 EMBL:AY070095 EMBL:AY096704
EMBL:AF488625 IPI:IPI00548412 RefSeq:NP_201335.1 UniGene:At.28395
ProteinModelPortal:Q9FKQ6 SMR:Q9FKQ6 EnsemblPlants:AT5G65320.1
GeneID:836657 KEGG:ath:AT5G65320 TAIR:At5g65320 eggNOG:NOG237691
InParanoid:Q9FKQ6 OMA:PNDQASI PhylomeDB:Q9FKQ6
ProtClustDB:CLSN2916276 Genevestigator:Q9FKQ6 Uniprot:Q9FKQ6
Length = 296
Score = 121 (47.7 bits), Expect = 0.00021, P = 0.00021
Identities = 29/82 (35%), Positives = 49/82 (59%)
Query: 465 GDPASRFRKG----TGTPQDEMSANHVLAERRRREKLNERFIILRSLVP--FVTKMDKAS 518
GD SR R+ T ++ NH+ ER RR+++N IL+S++P + D+AS
Sbjct: 79 GDFLSRKRRRRSEKTIVDKENQRMNHIAVERNRRKQMNHFLSILKSMMPLSYSQPNDQAS 138
Query: 519 ILGDTIEYVKQLRKKIQDLESR 540
I+ TI Y+K+L +++Q LE++
Sbjct: 139 IIEGTISYLKKLEQRLQSLEAQ 160
>TAIR|locus:504954900 [details] [associations]
symbol:AT5G43175 "AT5G43175" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB008267 HOGENOM:HOG000240244 ProtClustDB:CLSN2688032
IPI:IPI00519888 RefSeq:NP_680385.1 UniGene:At.55333
ProteinModelPortal:Q3E7L7 SMR:Q3E7L7 EnsemblPlants:AT5G43175.1
GeneID:834335 KEGG:ath:AT5G43175 TAIR:At5g43175 eggNOG:NOG323547
InParanoid:Q3E7L7 OMA:MENEAFV PhylomeDB:Q3E7L7
Genevestigator:Q3E7L7 Uniprot:Q3E7L7
Length = 223
Score = 118 (46.6 bits), Expect = 0.00021, P = 0.00021
Identities = 34/94 (36%), Positives = 51/94 (54%)
Query: 450 SKYRDENSPK-LGDVGGDPASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLV 508
S Y + K LG V S RK + S L R+RRE++N+R L+SLV
Sbjct: 107 SSYNSSDDEKALGLVSNTSKSLKRKAKAN-RGIASDPQSLYARKRRERINDRLKTLQSLV 165
Query: 509 PFVTKMDKASILGDTIEYVKQLRKKIQDLESRNI 542
P TK+D +++L D + YVK L+ +I+ L S ++
Sbjct: 166 PNGTKVDISTMLEDAVHYVKFLQLQIKLLSSEDL 199
>UNIPROTKB|Q69WS3 [details] [associations]
symbol:OJ1118_E12.15 "Putative bHLH protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003743
ProteinModelPortal:Q69WS3 Gramene:Q69WS3 Uniprot:Q69WS3
Length = 268
Score = 116 (45.9 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 29/84 (34%), Positives = 47/84 (55%)
Query: 456 NSPKLGDVGGDPASRFRKG---TGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVT 512
NS K D P ++ + + + +H LAER RREK++ER IL+ LVP
Sbjct: 106 NSSKAADKNATPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN 165
Query: 513 KM-DKASILGDTIEYVKQLRKKIQ 535
K+ KAS+L + I Y++ L+ +++
Sbjct: 166 KVIGKASVLDEIINYIQSLQHQVE 189
Score = 44 (20.5 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 367 SGQIPPEEELTPEDTHYSQTIST 389
SG+ P + PED S+ +ST
Sbjct: 40 SGRRRPRSDAGPEDDDLSKVVST 62
>TAIR|locus:2007534 [details] [associations]
symbol:AT1G03040 "AT1G03040" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF251692
EMBL:AC006550 EMBL:AY054469 EMBL:AY114633 IPI:IPI00529284
PIR:B86161 RefSeq:NP_001184895.1 RefSeq:NP_563672.1
UniGene:At.20497 ProteinModelPortal:Q93Y00 SMR:Q93Y00 IntAct:Q93Y00
PaxDb:Q93Y00 PRIDE:Q93Y00 EnsemblPlants:AT1G03040.1 GeneID:839446
KEGG:ath:AT1G03040 TAIR:At1g03040 eggNOG:NOG281566
HOGENOM:HOG000239571 InParanoid:Q93Y00 OMA:SIVKPEM PhylomeDB:Q93Y00
ProtClustDB:CLSN2687635 Genevestigator:Q93Y00 Uniprot:Q93Y00
Length = 302
Score = 120 (47.3 bits), Expect = 0.00028, P = 0.00028
Identities = 30/92 (32%), Positives = 48/92 (52%)
Query: 446 PYLHSKYRDENSPKLGDVGGDPASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILR 505
P H + + +P + R R G D H +AER RRE++ ER L+
Sbjct: 119 PIFHGQPMSQPAPPMPHQQSTIRPRVRARRGQATDP----HSIAERLRRERIAERIRSLQ 174
Query: 506 SLVPFVTKMDKASILGDTIEYVKQLRKKIQDL 537
LVP V K D+A+++ + ++YVK LR +++ L
Sbjct: 175 ELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVL 206
>TAIR|locus:2199221 [details] [associations]
symbol:RSL4 "AT1G27740" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0048766 "root hair
initiation" evidence=IMP] [GO:0048765 "root hair cell
differentiation" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0009733
GO:GO:0003677 GO:GO:0016049 GO:GO:0003700 GO:GO:0006351
EMBL:AC012375 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY085436
IPI:IPI00523669 PIR:B86402 RefSeq:NP_564293.1 UniGene:At.41015
ProteinModelPortal:Q8LEG1 SMR:Q8LEG1 EnsemblPlants:AT1G27740.1
GeneID:839667 KEGG:ath:AT1G27740 TAIR:At1g27740 eggNOG:NOG244031
HOGENOM:HOG000240244 InParanoid:Q8LEG1 OMA:DESNTNW PhylomeDB:Q8LEG1
ProtClustDB:CLSN2688032 Genevestigator:Q8LEG1 GO:GO:0048766
Uniprot:Q8LEG1
Length = 258
Score = 118 (46.6 bits), Expect = 0.00032, P = 0.00032
Identities = 35/93 (37%), Positives = 53/93 (56%)
Query: 450 SKYRDENSPKLGDVGGDPASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVP 509
S D+ + V G +R KGT T D S L R+RREK+NER L++LVP
Sbjct: 150 SNSSDDEKASVTSVKGK--TRATKGTAT--DPQS----LYARKRREKINERLKTLQNLVP 201
Query: 510 FVTKMDKASILGDTIEYVKQLRKKIQDLESRNI 542
TK+D +++L + + YVK L+ +I+ L S ++
Sbjct: 202 NGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDL 234
>UNIPROTKB|Q5JNS0 [details] [associations]
symbol:P0706B05.43 "Os01g0293100 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:AP002482 RefSeq:NP_001042795.1 UniGene:Os.54828 GeneID:4325164
KEGG:osa:4325164 HOGENOM:HOG000071096 OMA:HPQCELL
ProtClustDB:CLSN2691354 Uniprot:Q5JNS0
Length = 379
Score = 121 (47.7 bits), Expect = 0.00034, P = 0.00034
Identities = 46/194 (23%), Positives = 83/194 (42%)
Query: 455 ENSPKLGDVGGDPASRFRKGT--GTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVT 512
E+SP GG SR G G P + + E++RR +L E++ L L+P T
Sbjct: 149 ESSPTPRSGGGRKRSRATAGFHGGGPANGVEKK----EKQRRLRLTEKYNALMLLIPNRT 204
Query: 513 KMDKASILGDTIEYVKQLRKKIQDLE---SRNINNQILEGD---QRSRSADGSKDQRVLD 566
K D+A+++ D IEY+++L + +++L + + ++GD + S DQ
Sbjct: 205 KEDRATVISDAIEYIQELGRTVEELTLLVEKKRRRREMQGDVVDAATSSVVAGMDQAAES 264
Query: 567 RNARVGSGKRKLRKVEGSGGGXXXXXXXXXXXXXXTSVQVSIIESDALVELQCGNKEGLL 626
V + + V T V V I+E D ++L ++G L
Sbjct: 265 SEGEVMAAAA-MGAVAPPPRQAPIRSTYIQRRSKETFVDVRIVEDDVNIKLTKRRRDGCL 323
Query: 627 LDIMQMLRELLIEV 640
+ L +L +++
Sbjct: 324 AAASRALDDLRLDL 337
>TAIR|locus:2132303 [details] [associations]
symbol:UNE12 "AT4G02590" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009567 "double fertilization forming a zygote and endosperm"
evidence=IMP] [GO:0031347 "regulation of defense response"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0007275 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000239571
ProtClustDB:CLSN2687635 EMBL:AC002330 EMBL:AL161494 GO:GO:0031347
GO:GO:0009567 EMBL:AF488592 EMBL:AF367328 EMBL:AY143951
EMBL:AY088218 IPI:IPI00545077 IPI:IPI00892352 PIR:T01090
RefSeq:NP_001031577.1 RefSeq:NP_001118919.1 RefSeq:NP_567245.1
UniGene:At.20028 ProteinModelPortal:O22768 SMR:O22768 IntAct:O22768
PaxDb:O22768 PRIDE:O22768 EnsemblPlants:AT4G02590.1
EnsemblPlants:AT4G02590.2 GeneID:828126 KEGG:ath:AT4G02590
TAIR:At4g02590 eggNOG:euNOG02041 InParanoid:O22768 OMA:PAWEKWS
PhylomeDB:O22768 Genevestigator:O22768 Uniprot:O22768
Length = 310
Score = 119 (46.9 bits), Expect = 0.00038, P = 0.00038
Identities = 28/71 (39%), Positives = 43/71 (60%)
Query: 467 PASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEY 526
P R R+G T H +AER RRE++ ER L+ LVP V K D+A+++ + ++Y
Sbjct: 144 PRVRARRGQATDP------HSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDY 197
Query: 527 VKQLRKKIQDL 537
VK LR +++ L
Sbjct: 198 VKFLRLQVKVL 208
>UNIPROTKB|Q6ZCV8 [details] [associations]
symbol:P0028A08.20 "Os08g0487700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000145 EMBL:AP004557 RefSeq:NP_001062102.1 UniGene:Os.60678
EnsemblPlants:LOC_Os08g38080.1 GeneID:4345892 KEGG:osa:4345892
eggNOG:NOG275480 Uniprot:Q6ZCV8
Length = 365
Score = 120 (47.3 bits), Expect = 0.00041, P = 0.00041
Identities = 36/94 (38%), Positives = 55/94 (58%)
Query: 470 RFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMD-KASILGDTIEYVK 528
R RKG T NH LAER RREK++ER +L+ LVP +K+ KA +L + I YV+
Sbjct: 177 RARKGQATN------NHSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYVQ 230
Query: 529 QLRKKIQDLESR-NINNQILEGDQRSRSADGSKD 561
L+++++ L + + N ++ D S + SKD
Sbjct: 231 SLQRQVEFLSMKLSAVNPRIDLDIESL-VNNSKD 263
>UNIPROTKB|Q8H8H9 [details] [associations]
symbol:OJ1126B12.2 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC098695
EnsemblPlants:LOC_Os03g03000.1 KEGG:dosa:Os03t0122100-00
OMA:GAIDYVK Uniprot:Q8H8H9
Length = 291
Score = 118 (46.6 bits), Expect = 0.00043, P = 0.00043
Identities = 28/98 (28%), Positives = 52/98 (53%)
Query: 444 TVPYLHSKYRDENSPKLGDVGGDPASRFRKGTGTPQDEMSANHVLAERRRREKLNERFII 503
T P ++ R + P+ P + +K M+ H+ ER RR +N+
Sbjct: 80 TAPATRAERRRKR-PRPRPRAAPPPEKRKKPEEAENQRMT--HIAVERNRRRLMNDHLAS 136
Query: 504 LRSLVP--FVTKMDKASILGDTIEYVKQLRKKIQDLES 539
LRSL+P ++ + D+A+++G I+YVKQL +++ L++
Sbjct: 137 LRSLIPSNYIPRGDQATVVGGAIDYVKQLEQQLVALQA 174
>TAIR|locus:2147760 [details] [associations]
symbol:LRL3 "AT5G58010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0080147 "root hair cell development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 HOGENOM:HOG000239571 GO:GO:0080147
EMBL:AB026635 EMBL:AF488614 IPI:IPI00540554 RefSeq:NP_200609.1
UniGene:At.29300 ProteinModelPortal:Q9LSQ3 SMR:Q9LSQ3 PRIDE:Q9LSQ3
EnsemblPlants:AT5G58010.1 GeneID:835913 KEGG:ath:AT5G58010
TAIR:At5g58010 eggNOG:NOG252939 InParanoid:Q9LSQ3 OMA:TEQRVAK
PhylomeDB:Q9LSQ3 ProtClustDB:CLSN2916934 Genevestigator:Q9LSQ3
Uniprot:Q9LSQ3
Length = 297
Score = 118 (46.6 bits), Expect = 0.00045, P = 0.00045
Identities = 30/71 (42%), Positives = 42/71 (59%)
Query: 467 PASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEY 526
P R R+G T H +AER RRE++ ER L+ LVP K DKAS+L + IEY
Sbjct: 97 PRVRARRGQATDP------HSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEY 150
Query: 527 VKQLRKKIQDL 537
V+ L+ +++ L
Sbjct: 151 VRFLQLQVKVL 161
>ASPGD|ASPL0000062836 [details] [associations]
symbol:AN1114 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:AACD01000016 EMBL:BN001308
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG242942
RefSeq:XP_658718.1 ProteinModelPortal:Q5BEB6
EnsemblFungi:CADANIAT00001514 GeneID:2876891 KEGG:ani:AN1114.2
HOGENOM:HOG000206916 OMA:VNYLEKC Uniprot:Q5BEB6
Length = 393
Score = 118 (46.6 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 461 GDVGGDPASRFRKGTGTPQDEMSAN--HVLAERRRREKLNERFIILRSLVPFVT--KMDK 516
G GG + T +++ H L ERRRR K+NE F L++++P +M K
Sbjct: 138 GAAGGGSKKKQPSATSAAGRKIARKTAHSLIERRRRSKMNEEFSTLKNMIPACRGHEMHK 197
Query: 517 ASILGDTIEYVKQLRKKIQDLES 539
+IL +I+YV L K IQDL++
Sbjct: 198 LAILQASIDYVNYLEKCIQDLKA 220
Score = 44 (20.5 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 1 MDAPPPSSRLQSILQ 15
+D PPP +R + I+Q
Sbjct: 94 LDLPPPPTRTRKIIQ 108
>UNIPROTKB|Q69JJ6 [details] [associations]
symbol:OSJNBa0026C08.22 "TA1 protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008215
ProtClustDB:CLSN2697804 EMBL:AP006169 EMBL:HQ858863 EMBL:AK121418
RefSeq:NP_001063455.1 UniGene:Os.38400
EnsemblPlants:LOC_Os09g29830.3 GeneID:4347355 KEGG:osa:4347355
Uniprot:Q69JJ6
Length = 428
Score = 119 (46.9 bits), Expect = 0.00069, P = 0.00069
Identities = 36/105 (34%), Positives = 55/105 (52%)
Query: 448 LHSKYRDENSPKLGDVGGDPASRFRKGTGTPQDE----------MSAN-HVLAERRRREK 496
+HSK + E S GG + K T Q E + N H LAER RREK
Sbjct: 210 VHSKDKGEESSPATTNGGKSKGKGAKETSESQKEEYIHVRARRGQATNSHSLAERLRREK 269
Query: 497 LNERFIILRSLVPFVTKMD-KASILGDTIEYVKQLRKKIQDLESR 540
++ER +L+ LVP +K+ KA +L + I YV+ L+++++ L +
Sbjct: 270 ISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMK 314
>UNIPROTKB|Q6Z7E7 [details] [associations]
symbol:P0020C11.18 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:CM000139
EMBL:AP004865 EMBL:AK241924 EnsemblPlants:LOC_Os02g35660.1
OMA:TTAMQYL Uniprot:Q6Z7E7
Length = 524
Score = 120 (47.3 bits), Expect = 0.00073, P = 0.00073
Identities = 32/78 (41%), Positives = 45/78 (57%)
Query: 461 GDVG-GDPASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASI 519
G G G P R R G D H +AER RREK+++R L+ LVP K +KAS+
Sbjct: 303 GSAGNGAPKPRVRARRGQATDP----HSIAERLRREKISDRMKDLQELVPNSNKTNKASM 358
Query: 520 LGDTIEYVKQLRKKIQDL 537
L + I+YVK L+ +++ L
Sbjct: 359 LDEIIDYVKFLQLQVKVL 376
>UNIPROTKB|G3V2R5 [details] [associations]
symbol:MAX "Protein max" species:9606 "Homo sapiens"
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL139022 HGNC:HGNC:6913
ChiTaRS:MAX ProteinModelPortal:G3V2R5 SMR:G3V2R5
Ensembl:ENST00000556443 ArrayExpress:G3V2R5 Bgee:G3V2R5
Uniprot:G3V2R5
Length = 125
Score = 96 (38.9 bits), Expect = 0.00075, P = 0.00075
Identities = 27/82 (32%), Positives = 42/82 (51%)
Query: 484 ANHVLAERRRREKLNERFIILRSLVPFVT--KMDKASILGDTIEYVKQLRKKI----QDL 537
A+H ER+RR+ + + F LR VP + K +A IL EY++ +R+K QD+
Sbjct: 17 AHHNALERKRRDHIKDSFHSLRDSVPSLQGEKASRAQILDKATEYIQYMRRKNHTHQQDI 76
Query: 538 ESRNINNQILEGDQRSRSADGS 559
+ N +LE S+ GS
Sbjct: 77 DDLKRQNALLEQQGEHPSSWGS 98
>UNIPROTKB|Q6V3B1 [details] [associations]
symbol:MAX "MAX protein" species:9606 "Homo sapiens"
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P61244 EMBL:AL139022
HOVERGEN:HBG008542 UniGene:Hs.285354 HGNC:HGNC:6913 ChiTaRS:MAX
EMBL:AY353088 EMBL:CR542191 IPI:IPI01024945 SMR:Q6V3B1
STRING:Q6V3B1 Ensembl:ENST00000555667 UCSC:uc001xii.1
Uniprot:Q6V3B1
Length = 94
Score = 96 (38.9 bits), Expect = 0.00075, P = 0.00075
Identities = 26/78 (33%), Positives = 40/78 (51%)
Query: 484 ANHVLAERRRREKLNERFIILRSLVPFVT--KMDKASILGDTIEYVKQLRKKI----QDL 537
A+H ER+RR+ + + F LR VP + K +A IL EY++ +R+K QD+
Sbjct: 17 AHHNALERKRRDHIKDSFHSLRDSVPSLQGEKASRAQILDKATEYIQYMRRKNHTHQQDI 76
Query: 538 ESRNINNQILEGDQRSRS 555
+ N +LE S S
Sbjct: 77 DDLKRQNALLEQQGESES 94
>UNIPROTKB|Q7Y1H4 [details] [associations]
symbol:OSJNBa0094F01.11 "Putative uncharacterized protein
OSJNBa0094F01.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0009567
EMBL:AC093713 EMBL:AK104412 RefSeq:NP_001051563.1 UniGene:Os.27522
EnsemblPlants:LOC_Os03g58330.1 GeneID:4334429 KEGG:osa:4334429
OMA:TDGTERQ ProtClustDB:CLSN2694399 Uniprot:Q7Y1H4
Length = 294
Score = 115 (45.5 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 28/71 (39%), Positives = 42/71 (59%)
Query: 467 PASRFRKGTGTPQDEMSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEY 526
P R R+G T H +AER RRE++ ER L+ LVP K D+A++L + ++Y
Sbjct: 131 PKVRARRGQATDP------HSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDY 184
Query: 527 VKQLRKKIQDL 537
VK LR +++ L
Sbjct: 185 VKFLRLQVKVL 195
Score = 42 (19.8 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 13/51 (25%), Positives = 20/51 (39%)
Query: 331 DDQQQRGDSHRAESSRTWPMALQEPVMIGSSLQLPPSGQIPPEEELTPEDT 381
DD + G +A+ L PV G +Q P PP + P+ +
Sbjct: 67 DDAE--GGGSKADRETVQLTGLFPPVFGGGGVQPPNLRPTPPTQVFHPQQS 115
>WB|WBGene00003511 [details] [associations]
symbol:mxl-3 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0003700
GO:GO:0006366 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P61244
eggNOG:NOG239807 GeneTree:ENSGT00530000064011 KO:K04453 EMBL:Z70206
PIR:T20079 RefSeq:NP_510223.1 ProteinModelPortal:Q18711 SMR:Q18711
IntAct:Q18711 EnsemblMetazoa:F46G10.6.1 EnsemblMetazoa:F46G10.6.2
GeneID:181457 KEGG:cel:CELE_F46G10.6 UCSC:F46G10.6 CTD:181457
WormBase:F46G10.6 HOGENOM:HOG000018243 InParanoid:Q18711
OMA:RAHHNEL NextBio:914024 Uniprot:Q18711
Length = 235
Score = 113 (44.8 bits), Expect = 0.00092, P = 0.00092
Identities = 36/145 (24%), Positives = 67/145 (46%)
Query: 440 YVLFTVPYLHSKYRDENSPKLGDVGGDPASRFRKGTGTPQDEMSANHVLAERRRREKLNE 499
Y+L + + ++R + D D +S + + + D+ A+H ERRRR+ + +
Sbjct: 9 YLLSSSMKMEKQFRKRHH---SDSSDDDSSSPKSASPSMDDDRRAHHNELERRRRDHIKD 65
Query: 500 RFIILRSLVPFVT--KMDKASILGDTIEYVKQLRKKIQD----LESRNINNQILEGDQRS 553
F IL+ +P + K +A IL +E++ ++ K+ +E N++LE
Sbjct: 66 HFTILKDAIPLLDGEKSSRALILKRAVEFIHVMQTKLSSQGKAIEDLTRKNELLEERLLE 125
Query: 554 RSADGSKDQRVLDRNARVGSGKRKL 578
R + GS L A V S + +L
Sbjct: 126 RESSGSPSSSRLPALA-VSSSQMQL 149
>UNIPROTKB|Q18711 [details] [associations]
symbol:mxl-3 "Protein MXL-3" species:6239 "Caenorhabditis
elegans" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0003700 GO:GO:0006366 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 eggNOG:NOG239807
GeneTree:ENSGT00530000064011 KO:K04453 EMBL:Z70206 PIR:T20079
RefSeq:NP_510223.1 ProteinModelPortal:Q18711 SMR:Q18711
IntAct:Q18711 EnsemblMetazoa:F46G10.6.1 EnsemblMetazoa:F46G10.6.2
GeneID:181457 KEGG:cel:CELE_F46G10.6 UCSC:F46G10.6 CTD:181457
WormBase:F46G10.6 HOGENOM:HOG000018243 InParanoid:Q18711
OMA:RAHHNEL NextBio:914024 Uniprot:Q18711
Length = 235
Score = 113 (44.8 bits), Expect = 0.00092, P = 0.00092
Identities = 36/145 (24%), Positives = 67/145 (46%)
Query: 440 YVLFTVPYLHSKYRDENSPKLGDVGGDPASRFRKGTGTPQDEMSANHVLAERRRREKLNE 499
Y+L + + ++R + D D +S + + + D+ A+H ERRRR+ + +
Sbjct: 9 YLLSSSMKMEKQFRKRHH---SDSSDDDSSSPKSASPSMDDDRRAHHNELERRRRDHIKD 65
Query: 500 RFIILRSLVPFVT--KMDKASILGDTIEYVKQLRKKIQD----LESRNINNQILEGDQRS 553
F IL+ +P + K +A IL +E++ ++ K+ +E N++LE
Sbjct: 66 HFTILKDAIPLLDGEKSSRALILKRAVEFIHVMQTKLSSQGKAIEDLTRKNELLEERLLE 125
Query: 554 RSADGSKDQRVLDRNARVGSGKRKL 578
R + GS L A V S + +L
Sbjct: 126 RESSGSPSSSRLPALA-VSSSQMQL 149
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.130 0.376 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 687 638 0.00093 120 3 11 23 0.44 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 132
No. of states in DFA: 621 (66 KB)
Total size of DFA: 339 KB (2170 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 58.23u 0.19s 58.42t Elapsed: 00:00:03
Total cpu time: 58.24u 0.19s 58.43t Elapsed: 00:00:03
Start: Fri May 10 00:25:54 2013 End: Fri May 10 00:25:57 2013
WARNINGS ISSUED: 1