Query 037801
Match_columns 84
No_of_seqs 100 out of 263
Neff 4.3
Searched_HMMs 13730
Date Mon Mar 25 07:06:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037801.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/037801hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1wgla_ a.5.2.4 (A:) Toll-inte 58.7 1.8 0.00013 24.5 1.2 46 5-55 13-58 (59)
2 d1mn3a_ a.5.2.4 (A:) Vacuolar 53.9 2.4 0.00017 23.6 1.2 12 5-16 16-27 (54)
3 d1a0aa_ a.38.1.1 (A:) Pho4 B/H 48.2 4.1 0.0003 22.1 1.6 40 6-50 22-61 (63)
4 d1uklc_ a.38.1.1 (C:) SREBP-2 39.8 5.9 0.00043 21.4 1.4 32 6-49 9-41 (61)
5 d2vgba3 c.49.1.1 (A:440-573) P 32.3 18 0.0013 21.7 3.0 32 36-67 17-49 (134)
6 d1e0ta3 c.49.1.1 (A:354-470) P 30.0 22 0.0016 20.9 3.1 31 37-67 7-38 (117)
7 d1pkla3 c.49.1.1 (A:358-498) P 27.6 23 0.0017 21.5 2.9 33 35-67 23-56 (141)
8 d1a3xa3 c.49.1.1 (A:367-500) P 26.4 23 0.0017 21.2 2.7 32 36-67 17-49 (134)
9 d2cosa1 a.5.2.1 (A:8-48) Serin 17.9 20 0.0015 18.6 0.9 12 32-43 27-38 (41)
10 d1u6la_ d.32.1.7 (A:) Hypothet 17.2 19 0.0014 20.7 0.8 25 26-50 3-29 (137)
No 1
>d1wgla_ a.5.2.4 (A:) Toll-interacting protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=58.65 E-value=1.8 Score=24.50 Aligned_cols=46 Identities=13% Similarity=0.169 Sum_probs=31.3
Q ss_pred hhhHHHhcccceeccCCCCcccccccccchhhHhHhhhhhhcccceeeecC
Q 037801 5 VVFALRNYSSAAKQGKLASVEELEPFVNHASQMAALDYIVSVESDVFIPSY 55 (84)
Q Consensus 5 ~~~L~~~FPn~~tKe~L~~~~EL~~f~~~~s~~aAlDy~V~~~SDvFv~t~ 55 (84)
+.-|++|||++... .+ ..=|. .+.++..+|+|=.....-+.|-|+.
T Consensus 13 i~~LkeMFP~~D~~-vI--~~VL~--a~~G~vd~aid~LL~Msd~~~gp~s 58 (59)
T d1wgla_ 13 LKAIQDMFPNMDQE-VI--RSVLE--AQRGNKDAAINSLLQMGEEPSGPSS 58 (59)
T ss_dssp HHHHHHHCSSSCHH-HH--HHHHT--TTTTCHHHHHHHHHHSSCCCCSCCC
T ss_pred HHHHHHHCCCCCHH-HH--HHHHH--HcCCCHHHHHHHHHhcCCCCcCCCC
Confidence 67899999998532 12 11111 3577788999988888877777653
No 2
>d1mn3a_ a.5.2.4 (A:) Vacuolar protein sorting-associated protein vps9 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=53.94 E-value=2.4 Score=23.56 Aligned_cols=12 Identities=0% Similarity=-0.061 Sum_probs=10.1
Q ss_pred hhhHHHhcccce
Q 037801 5 VVFALRNYSSAA 16 (84)
Q Consensus 5 ~~~L~~~FPn~~ 16 (84)
+.-|++|||++-
T Consensus 16 ~~~Lk~MFP~~D 27 (54)
T d1mn3a_ 16 LNTLQNMFPDMD 27 (54)
T ss_dssp HHHHHHHCTTSC
T ss_pred HHHHHHHCCCCC
Confidence 577999999974
No 3
>d1a0aa_ a.38.1.1 (A:) Pho4 B/HLH domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=48.23 E-value=4.1 Score=22.15 Aligned_cols=40 Identities=15% Similarity=0.042 Sum_probs=23.6
Q ss_pred hhHHHhcccceeccCCCCcccccccccchhhHhHhhhhhhcccce
Q 037801 6 VFALRNYSSAAKQGKLASVEELEPFVNHASQMAALDYIVSVESDV 50 (84)
Q Consensus 6 ~~L~~~FPn~~tKe~L~~~~EL~~f~~~~s~~aAlDy~V~~~SDv 50 (84)
.-|+++-|...+...-.. ....-+-...|+|||-.++.+|
T Consensus 22 ~~L~~llP~~~~~~~~~~-----k~sKa~iL~~Av~yI~~Lq~~v 61 (63)
T d1a0aa_ 22 HELASLIPAEWKQQNVSA-----APSKATTVEAACRYIRHLQQNG 61 (63)
T ss_dssp HHHHHTSCHHHHTSSCCC-----CSCTTHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHCCCcccccCCcc-----cccHHHHHHHHHHHHHHHHHhh
Confidence 456777775543332111 1122334779999999988765
No 4
>d1uklc_ a.38.1.1 (C:) SREBP-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.82 E-value=5.9 Score=21.42 Aligned_cols=32 Identities=13% Similarity=0.127 Sum_probs=21.1
Q ss_pred hhHHHhcccceeccCCCCcccccccccchh-hHhHhhhhhhcccc
Q 037801 6 VFALRNYSSAAKQGKLASVEELEPFVNHAS-QMAALDYIVSVESD 49 (84)
Q Consensus 6 ~~L~~~FPn~~tKe~L~~~~EL~~f~~~~s-~~aAlDy~V~~~SD 49 (84)
.-|+++-|+..+| .++++ ...|+|||-.++..
T Consensus 9 ~~L~~lvP~~~~K------------~~Ka~iL~~Ai~YI~~Lq~~ 41 (61)
T d1uklc_ 9 IELKDLVMGTDAK------------MHKSGVLRKAIDYIKYLQQV 41 (61)
T ss_dssp HHHHHHHSCSSCC------------CCTTTHHHHHHHHHHHHHHH
T ss_pred HHHHhhCCCCCCc------------ccHHHHHHHHHHHHHHHHHH
Confidence 4678888875433 12333 66899999887654
No 5
>d2vgba3 c.49.1.1 (A:440-573) Pyruvate kinase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.33 E-value=18 Score=21.75 Aligned_cols=32 Identities=9% Similarity=0.163 Sum_probs=25.6
Q ss_pred hHhHhhhhhhcccc-eeeecCCCcHHHHHhhhc
Q 037801 36 QMAALDYIVSVESD-VFIPSYSGNMARAVEGHL 67 (84)
Q Consensus 36 ~~aAlDy~V~~~SD-vFv~t~~GNm~~~v~GhR 67 (84)
..+|.+--..+++. +.+.|.+|..++.++-+|
T Consensus 17 a~sav~~A~~l~a~aIvv~T~sG~tar~vSk~R 49 (134)
T d2vgba3 17 AIGAVEAAFKCCAAAIIVLTTTGRSAQLLSRYR 49 (134)
T ss_dssp HHHHHHHHHHHTCSEEEEECSSSHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCEEEEEcCCcHHHHHHHhhc
Confidence 45566666667777 778899999999999988
No 6
>d1e0ta3 c.49.1.1 (A:354-470) Pyruvate kinase, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=30.03 E-value=22 Score=20.89 Aligned_cols=31 Identities=19% Similarity=0.334 Sum_probs=24.1
Q ss_pred HhHhhhhhhcccc-eeeecCCCcHHHHHhhhc
Q 037801 37 MAALDYIVSVESD-VFIPSYSGNMARAVEGHL 67 (84)
Q Consensus 37 ~aAlDy~V~~~SD-vFv~t~~GNm~~~v~GhR 67 (84)
.+|.+---.+++. +.+.|.+|+.++.++-+|
T Consensus 7 ~aa~~~a~~l~akaIvv~T~sG~tar~iS~~R 38 (117)
T d1e0ta3 7 RGAVETAEKLDAPLIVVATQGGKSARAVRKYF 38 (117)
T ss_dssp HHHHHHHHHTTCSBEEEECSSSHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCEEEEEcCCChHHHHHHhhc
Confidence 4555555566677 677899999999999998
No 7
>d1pkla3 c.49.1.1 (A:358-498) Pyruvate kinase, C-terminal domain {Leishmania mexicana [TaxId: 5665]}
Probab=27.64 E-value=23 Score=21.47 Aligned_cols=33 Identities=18% Similarity=0.203 Sum_probs=26.5
Q ss_pred hhHhHhhhhhhcccc-eeeecCCCcHHHHHhhhc
Q 037801 35 SQMAALDYIVSVESD-VFIPSYSGNMARAVEGHL 67 (84)
Q Consensus 35 s~~aAlDy~V~~~SD-vFv~t~~GNm~~~v~GhR 67 (84)
-.++|..--..+++. +.+.|.+|+.++.++-.|
T Consensus 23 ia~sAv~~A~~l~akaIvv~T~sG~tar~iSk~R 56 (141)
T d1pkla3 23 VCSSAVNSVYETKAKAMVVLSNTGRSARLVAKYR 56 (141)
T ss_dssp HHHHHHHHHHHHTCSCEEEECSSSHHHHHHHHTC
T ss_pred HHHHHHHHHHHcCCCEEEEECCCcHHHHHHHhhc
Confidence 355677777777777 577899999999999888
No 8
>d1a3xa3 c.49.1.1 (A:367-500) Pyruvate kinase, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=26.36 E-value=23 Score=21.25 Aligned_cols=32 Identities=19% Similarity=0.235 Sum_probs=26.0
Q ss_pred hHhHhhhhhhcccc-eeeecCCCcHHHHHhhhc
Q 037801 36 QMAALDYIVSVESD-VFIPSYSGNMARAVEGHL 67 (84)
Q Consensus 36 ~~aAlDy~V~~~SD-vFv~t~~GNm~~~v~GhR 67 (84)
..+|..---.+++. +.+.|.+|..++.++-+|
T Consensus 17 a~sAv~~a~~l~a~aIvv~T~sG~ta~~vSk~R 49 (134)
T d1a3xa3 17 AASAVAAVFEQKAKAIIVLSTSGTTPRLVSKYR 49 (134)
T ss_dssp HHHHHHHHHHHTCSCCCEECSSSHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCEEEEEcCCcHHHHHHHHhc
Confidence 45666666667777 688899999999999888
No 9
>d2cosa1 a.5.2.1 (A:8-48) Serine/threonine protein kinase LATS2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=17.89 E-value=20 Score=18.60 Aligned_cols=12 Identities=50% Similarity=0.589 Sum_probs=10.0
Q ss_pred cchhhHhHhhhh
Q 037801 32 NHASQMAALDYI 43 (84)
Q Consensus 32 ~~~s~~aAlDy~ 43 (84)
|..|.+|||.||
T Consensus 27 ~~rsieaaie~i 38 (41)
T d2cosa1 27 GSRSIEAALEYI 38 (41)
T ss_dssp TSCCHHHHHHHH
T ss_pred CcccHHHHHHHH
Confidence 566789999997
No 10
>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=17.22 E-value=19 Score=20.75 Aligned_cols=25 Identities=8% Similarity=0.207 Sum_probs=18.3
Q ss_pred cccccccch-hhHhHhhhhh-hcccce
Q 037801 26 ELEPFVNHA-SQMAALDYIV-SVESDV 50 (84)
Q Consensus 26 EL~~f~~~~-s~~aAlDy~V-~~~SDv 50 (84)
.+.|+..+. +..+||+||. ++..++
T Consensus 3 ~i~pyl~f~g~a~eAl~FY~~~fG~e~ 29 (137)
T d1u6la_ 3 QIVPYLIFNGNCREAFSCYHQHLGGTL 29 (137)
T ss_dssp EEEEEEEESSCHHHHHHHHHHHHCSEE
T ss_pred eEEEEEEECCCHHHHHHHHHHHCCCEE
Confidence 466777774 8999999997 445554
Done!