Query 037807
Match_columns 299
No_of_seqs 377 out of 2766
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 07:12:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037807.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037807hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3o4f_A Spermidine synthase; am 100.0 1E-68 3.5E-73 486.9 22.3 275 2-285 17-292 (294)
2 3adn_A Spermidine synthase; am 100.0 2.1E-58 7.1E-63 422.5 20.2 276 1-285 16-292 (294)
3 2i7c_A Spermidine synthase; tr 100.0 2.8E-54 9.6E-59 393.1 30.0 271 2-284 12-282 (283)
4 1iy9_A Spermidine synthase; ro 100.0 2.4E-54 8.3E-59 392.1 29.4 266 3-283 10-275 (275)
5 1xj5_A Spermidine synthase 1; 100.0 3.4E-53 1.2E-57 394.2 30.7 278 2-284 54-331 (334)
6 2o07_A Spermidine synthase; st 100.0 1.4E-53 4.7E-58 392.4 26.9 274 2-284 29-302 (304)
7 2b2c_A Spermidine synthase; be 100.0 1.3E-53 4.3E-58 394.1 25.4 273 2-283 42-314 (314)
8 1inl_A Spermidine synthase; be 100.0 4.7E-52 1.6E-56 380.8 28.8 270 3-284 25-295 (296)
9 2pt6_A Spermidine synthase; tr 100.0 6.7E-52 2.3E-56 383.8 28.5 270 2-284 50-320 (321)
10 3bwc_A Spermidine synthase; SA 100.0 2.3E-51 7.9E-56 377.5 27.9 273 2-283 26-302 (304)
11 1mjf_A Spermidine synthase; sp 100.0 4.4E-50 1.5E-54 365.0 25.6 264 3-284 10-280 (281)
12 2cmg_A Spermidine synthase; tr 100.0 1E-50 3.6E-55 365.8 20.6 254 3-287 8-261 (262)
13 1uir_A Polyamine aminopropyltr 100.0 4E-50 1.4E-54 370.8 24.9 274 3-286 12-290 (314)
14 3c6k_A Spermine synthase; sper 100.0 1.7E-48 5.7E-53 364.0 22.6 223 2-230 138-377 (381)
15 2qfm_A Spermine synthase; sper 100.0 8.6E-44 2.9E-48 331.1 25.5 223 2-230 121-360 (364)
16 3gjy_A Spermidine synthase; AP 100.0 4.5E-34 1.5E-38 262.6 19.0 231 21-270 29-281 (317)
17 3orh_A Guanidinoacetate N-meth 99.6 1.9E-15 6.5E-20 133.1 10.1 122 52-182 47-169 (236)
18 3p9n_A Possible methyltransfer 99.6 8.1E-15 2.8E-19 124.0 13.5 110 67-184 43-154 (189)
19 3tfw_A Putative O-methyltransf 99.6 3.2E-14 1.1E-18 126.0 17.0 106 68-183 63-170 (248)
20 1sui_A Caffeoyl-COA O-methyltr 99.6 1.8E-14 6.1E-19 127.8 15.1 107 67-183 78-190 (247)
21 3c3y_A Pfomt, O-methyltransfer 99.6 9.5E-15 3.2E-19 128.7 12.8 107 67-183 69-181 (237)
22 3duw_A OMT, O-methyltransferas 99.6 3.7E-14 1.3E-18 122.8 15.3 106 68-183 58-167 (223)
23 3ntv_A MW1564 protein; rossman 99.6 2.8E-14 9.5E-19 125.0 14.5 104 68-182 71-175 (232)
24 3c3p_A Methyltransferase; NP_9 99.6 1E-14 3.5E-19 125.4 11.4 104 68-183 56-160 (210)
25 3dr5_A Putative O-methyltransf 99.6 1.8E-14 6.2E-19 125.8 12.8 105 70-183 58-163 (221)
26 3dxy_A TRNA (guanine-N(7)-)-me 99.6 4.1E-14 1.4E-18 123.3 13.9 127 68-202 34-165 (218)
27 1yzh_A TRNA (guanine-N(7)-)-me 99.5 7.1E-14 2.4E-18 120.6 14.1 113 68-184 41-157 (214)
28 2fca_A TRNA (guanine-N(7)-)-me 99.5 9.3E-14 3.2E-18 120.3 14.8 113 68-184 38-154 (213)
29 3r3h_A O-methyltransferase, SA 99.5 1.9E-14 6.5E-19 127.3 10.4 105 68-182 60-169 (242)
30 1dus_A MJ0882; hypothetical pr 99.5 3.1E-13 1.1E-17 113.2 14.7 125 67-205 51-175 (194)
31 3tr6_A O-methyltransferase; ce 99.5 1.7E-13 5.9E-18 118.6 13.4 106 68-183 64-174 (225)
32 3e05_A Precorrin-6Y C5,15-meth 99.5 2.1E-13 7.2E-18 116.5 13.7 120 67-203 39-158 (204)
33 2ozv_A Hypothetical protein AT 99.5 1.5E-13 5.1E-18 122.7 13.3 130 67-204 35-186 (260)
34 1xdz_A Methyltransferase GIDB; 99.5 4.4E-13 1.5E-17 117.8 15.6 147 68-230 70-218 (240)
35 1zx0_A Guanidinoacetate N-meth 99.5 9.7E-14 3.3E-18 121.5 11.2 110 67-182 59-169 (236)
36 3cbg_A O-methyltransferase; cy 99.5 4.7E-13 1.6E-17 117.2 14.7 106 68-183 72-182 (232)
37 2avd_A Catechol-O-methyltransf 99.5 2.8E-13 9.7E-18 117.5 13.0 106 67-182 68-178 (229)
38 3njr_A Precorrin-6Y methylase; 99.5 5.4E-13 1.8E-17 114.7 14.6 117 67-203 54-170 (204)
39 3u81_A Catechol O-methyltransf 99.5 1.6E-13 5.6E-18 119.0 11.3 108 68-183 58-170 (221)
40 4gek_A TRNA (CMO5U34)-methyltr 99.5 9.5E-14 3.2E-18 124.3 10.0 109 66-183 68-178 (261)
41 3ckk_A TRNA (guanine-N(7)-)-me 99.5 2.8E-13 9.5E-18 119.4 12.5 130 68-201 46-182 (235)
42 3fpf_A Mtnas, putative unchara 99.5 2.9E-13 9.9E-18 122.9 12.8 105 64-184 118-223 (298)
43 2ift_A Putative methylase HI07 99.5 6.4E-14 2.2E-18 120.2 7.9 109 68-184 53-164 (201)
44 3hm2_A Precorrin-6Y C5,15-meth 99.5 5.4E-13 1.8E-17 110.8 13.3 104 67-183 24-127 (178)
45 3mti_A RRNA methylase; SAM-dep 99.5 6.6E-13 2.3E-17 111.4 13.9 110 67-183 21-135 (185)
46 2igt_A SAM dependent methyltra 99.5 7.5E-13 2.6E-17 122.5 15.4 127 68-198 153-288 (332)
47 3lpm_A Putative methyltransfer 99.5 5.7E-13 2E-17 118.4 13.9 126 68-202 49-190 (259)
48 2hnk_A SAM-dependent O-methylt 99.5 3.6E-13 1.2E-17 118.2 12.3 106 68-183 60-181 (239)
49 2fpo_A Methylase YHHF; structu 99.5 1.5E-13 5.3E-18 117.8 9.7 105 68-183 54-160 (202)
50 2fhp_A Methylase, putative; al 99.5 8.8E-14 3E-18 116.5 7.7 109 68-185 44-156 (187)
51 3mb5_A SAM-dependent methyltra 99.5 3.4E-13 1.2E-17 119.1 11.7 118 67-203 92-210 (255)
52 4dzr_A Protein-(glutamine-N5) 99.5 1.2E-13 4.2E-18 117.7 8.4 151 67-230 29-204 (215)
53 2frn_A Hypothetical protein PH 99.5 5.1E-13 1.7E-17 120.4 12.9 122 67-203 124-247 (278)
54 2esr_A Methyltransferase; stru 99.5 9.9E-14 3.4E-18 115.7 7.4 109 67-185 30-140 (177)
55 4hg2_A Methyltransferase type 99.4 7.8E-14 2.7E-18 124.6 7.0 98 67-183 38-135 (257)
56 3g89_A Ribosomal RNA small sub 99.4 1.6E-12 5.5E-17 115.4 15.1 148 67-230 79-228 (249)
57 2b78_A Hypothetical protein SM 99.4 2.9E-12 9.9E-17 120.8 17.7 130 67-199 211-347 (385)
58 1ws6_A Methyltransferase; stru 99.4 3.9E-13 1.3E-17 110.8 9.3 104 68-184 41-148 (171)
59 3evz_A Methyltransferase; NYSG 99.4 4.2E-13 1.4E-17 116.5 9.7 127 67-203 54-196 (230)
60 3eey_A Putative rRNA methylase 99.4 1.5E-12 5E-17 110.4 11.5 113 67-183 21-139 (197)
61 2vdv_E TRNA (guanine-N(7)-)-me 99.4 2.3E-12 7.7E-17 113.7 13.0 116 68-183 49-173 (246)
62 3dlc_A Putative S-adenosyl-L-m 99.4 1E-12 3.4E-17 112.4 10.2 105 68-182 43-147 (219)
63 2b3t_A Protein methyltransfera 99.4 3.6E-12 1.2E-16 114.3 14.1 141 32-183 76-238 (276)
64 1l3i_A Precorrin-6Y methyltran 99.4 5.3E-12 1.8E-16 105.5 13.9 119 67-203 32-150 (192)
65 1jsx_A Glucose-inhibited divis 99.4 1.1E-12 3.7E-17 112.0 9.5 102 68-184 65-166 (207)
66 1nt2_A Fibrillarin-like PRE-rR 99.4 8E-12 2.7E-16 108.0 14.6 104 67-183 56-161 (210)
67 2nxc_A L11 mtase, ribosomal pr 99.4 4.4E-12 1.5E-16 112.7 13.2 116 67-203 119-234 (254)
68 4dcm_A Ribosomal RNA large sub 99.4 4.7E-12 1.6E-16 119.0 14.0 112 68-183 222-334 (375)
69 2yvl_A TRMI protein, hypotheti 99.4 2.9E-12 9.8E-17 112.3 11.6 117 68-204 91-207 (248)
70 1g8a_A Fibrillarin-like PRE-rR 99.4 1.3E-11 4.4E-16 107.1 15.6 103 67-182 72-177 (227)
71 2gpy_A O-methyltransferase; st 99.4 1.2E-12 4E-17 114.2 9.0 105 68-182 54-159 (233)
72 2pwy_A TRNA (adenine-N(1)-)-me 99.4 2.4E-12 8.3E-17 113.4 11.0 117 67-202 95-213 (258)
73 3grz_A L11 mtase, ribosomal pr 99.4 1.3E-12 4.3E-17 111.6 8.6 130 35-182 28-158 (205)
74 4dmg_A Putative uncharacterize 99.4 4.5E-12 1.5E-16 119.8 13.0 123 68-198 214-341 (393)
75 3dli_A Methyltransferase; PSI- 99.4 3.3E-12 1.1E-16 111.8 11.2 103 67-185 40-142 (240)
76 3a27_A TYW2, uncharacterized p 99.4 3.3E-12 1.1E-16 114.7 11.5 123 67-204 118-241 (272)
77 1nv8_A HEMK protein; class I a 99.4 3.8E-12 1.3E-16 115.1 11.9 143 31-184 88-250 (284)
78 3c0k_A UPF0064 protein YCCW; P 99.4 7.7E-12 2.6E-16 118.1 14.5 129 67-198 219-354 (396)
79 3dtn_A Putative methyltransfer 99.4 1.7E-12 6E-17 112.8 9.3 106 67-183 43-148 (234)
80 3hem_A Cyclopropane-fatty-acyl 99.4 4.3E-12 1.5E-16 115.0 12.3 108 67-183 71-183 (302)
81 2yxd_A Probable cobalt-precorr 99.4 1.9E-11 6.7E-16 101.3 15.3 114 67-203 34-147 (183)
82 1yb2_A Hypothetical protein TA 99.4 1.7E-12 5.8E-17 116.5 9.2 116 67-202 109-226 (275)
83 1wxx_A TT1595, hypothetical pr 99.4 4.4E-12 1.5E-16 119.3 12.4 125 68-198 209-340 (382)
84 3mgg_A Methyltransferase; NYSG 99.4 2.1E-12 7.1E-17 115.2 9.6 107 67-183 36-142 (276)
85 3lbf_A Protein-L-isoaspartate 99.4 3.4E-12 1.2E-16 109.2 10.6 101 67-185 76-176 (210)
86 3g07_A 7SK snRNA methylphospha 99.4 2.5E-12 8.7E-17 116.4 10.3 116 68-183 46-220 (292)
87 3jwg_A HEN1, methyltransferase 99.3 3.8E-12 1.3E-16 109.6 10.8 113 67-183 28-141 (219)
88 3jwh_A HEN1; methyltransferase 99.3 2E-12 6.7E-17 111.4 8.8 112 68-183 29-141 (217)
89 2b25_A Hypothetical protein; s 99.3 1.7E-12 5.7E-17 119.8 8.7 123 67-202 104-234 (336)
90 4htf_A S-adenosylmethionine-de 99.3 3.2E-12 1.1E-16 114.8 10.3 107 67-183 67-173 (285)
91 2bm8_A Cephalosporin hydroxyla 99.3 1.4E-12 4.7E-17 114.9 7.8 100 68-183 81-187 (236)
92 3k6r_A Putative transferase PH 99.3 5.7E-12 2E-16 113.7 11.9 102 67-183 124-225 (278)
93 2ex4_A Adrenal gland protein A 99.3 5.4E-12 1.8E-16 110.5 11.2 107 68-183 79-185 (241)
94 1o54_A SAM-dependent O-methylt 99.3 3.1E-12 1.1E-16 114.7 9.7 117 67-202 111-228 (277)
95 3kkz_A Uncharacterized protein 99.3 2E-12 6.9E-17 115.0 8.2 106 67-183 45-150 (267)
96 1vl5_A Unknown conserved prote 99.3 2.2E-12 7.4E-17 114.2 8.4 105 67-183 36-140 (260)
97 1pjz_A Thiopurine S-methyltran 99.3 5.9E-13 2E-17 114.3 4.6 108 67-179 21-136 (203)
98 1ve3_A Hypothetical protein PH 99.3 2.6E-12 9E-17 110.8 8.5 106 67-183 37-142 (227)
99 3ofk_A Nodulation protein S; N 99.3 2.2E-12 7.5E-17 110.8 7.9 105 67-183 50-154 (216)
100 3f4k_A Putative methyltransfer 99.3 3.8E-12 1.3E-16 112.1 9.6 106 67-183 45-150 (257)
101 2gb4_A Thiopurine S-methyltran 99.3 3E-12 1E-16 113.9 8.9 109 68-181 68-189 (252)
102 3g5l_A Putative S-adenosylmeth 99.3 5.2E-12 1.8E-16 111.1 10.3 104 68-185 44-147 (253)
103 3gu3_A Methyltransferase; alph 99.3 2.8E-12 9.5E-17 115.4 8.6 107 67-185 21-128 (284)
104 1fbn_A MJ fibrillarin homologu 99.3 5.3E-12 1.8E-16 110.1 9.9 103 67-182 73-177 (230)
105 2as0_A Hypothetical protein PH 99.3 7.2E-12 2.5E-16 118.3 11.5 127 68-198 217-350 (396)
106 3g5t_A Trans-aconitate 3-methy 99.3 5.5E-12 1.9E-16 114.1 9.8 108 67-181 35-147 (299)
107 2p7i_A Hypothetical protein; p 99.3 4.3E-12 1.5E-16 110.4 8.7 100 68-184 42-142 (250)
108 1nkv_A Hypothetical protein YJ 99.3 3.6E-12 1.2E-16 112.2 8.2 106 67-183 35-140 (256)
109 3hnr_A Probable methyltransfer 99.3 8.2E-12 2.8E-16 107.4 10.2 113 53-183 33-145 (220)
110 3dmg_A Probable ribosomal RNA 99.3 6.6E-12 2.3E-16 118.2 10.2 108 68-184 233-341 (381)
111 3dh0_A SAM dependent methyltra 99.3 2.4E-12 8.4E-17 110.6 6.6 107 67-183 36-143 (219)
112 1xxl_A YCGJ protein; structura 99.3 6.7E-12 2.3E-16 109.9 9.3 105 67-183 20-124 (239)
113 2xvm_A Tellurite resistance pr 99.3 6.7E-12 2.3E-16 105.9 8.7 105 67-182 31-135 (199)
114 3v97_A Ribosomal RNA large sub 99.3 2.3E-11 7.8E-16 122.9 14.1 114 68-185 539-659 (703)
115 1kpg_A CFA synthase;, cyclopro 99.3 1.7E-11 5.7E-16 110.0 11.7 105 67-183 63-168 (287)
116 2vdw_A Vaccinia virus capping 99.3 8.8E-12 3E-16 113.8 10.0 115 67-184 47-170 (302)
117 4df3_A Fibrillarin-like rRNA/T 99.3 2.6E-10 8.7E-15 100.2 18.8 127 66-204 75-209 (233)
118 3bkw_A MLL3908 protein, S-aden 99.3 9.8E-12 3.3E-16 108.3 9.7 103 68-184 43-145 (243)
119 2qm3_A Predicted methyltransfe 99.3 3E-11 1E-15 113.2 13.3 104 68-181 172-276 (373)
120 3ujc_A Phosphoethanolamine N-m 99.3 5.9E-12 2E-16 111.0 7.9 106 67-183 54-159 (266)
121 3e8s_A Putative SAM dependent 99.3 1.9E-11 6.7E-16 104.8 10.9 101 68-185 52-154 (227)
122 3d2l_A SAM-dependent methyltra 99.3 6.3E-12 2.2E-16 109.5 7.9 106 67-185 32-139 (243)
123 2pxx_A Uncharacterized protein 99.3 1E-11 3.4E-16 105.9 9.0 108 67-183 41-159 (215)
124 1i9g_A Hypothetical protein RV 99.3 1.4E-11 4.7E-16 110.2 10.2 119 67-202 98-218 (280)
125 3h2b_A SAM-dependent methyltra 99.3 1.1E-11 3.7E-16 105.4 8.9 100 69-183 42-141 (203)
126 3ajd_A Putative methyltransfer 99.3 4.6E-11 1.6E-15 107.3 13.4 116 67-186 82-214 (274)
127 3r0q_C Probable protein argini 99.3 8.4E-12 2.9E-16 117.2 8.9 109 67-184 62-170 (376)
128 4fsd_A Arsenic methyltransfera 99.3 9.9E-12 3.4E-16 116.9 9.3 113 67-183 82-203 (383)
129 3l8d_A Methyltransferase; stru 99.3 1.3E-11 4.5E-16 107.5 9.5 102 67-183 52-153 (242)
130 2p35_A Trans-aconitate 2-methy 99.3 5.4E-12 1.9E-16 111.1 7.0 102 67-184 32-133 (259)
131 2yqz_A Hypothetical protein TT 99.3 1.3E-11 4.4E-16 108.8 9.4 103 67-182 38-140 (263)
132 3lcc_A Putative methyl chlorid 99.3 5.3E-12 1.8E-16 110.0 6.8 106 68-183 66-171 (235)
133 3ccf_A Cyclopropane-fatty-acyl 99.3 1.5E-11 5.1E-16 110.0 9.7 100 67-184 56-155 (279)
134 3bus_A REBM, methyltransferase 99.3 1.4E-11 4.8E-16 109.5 9.4 107 67-183 60-166 (273)
135 3thr_A Glycine N-methyltransfe 99.3 6.5E-12 2.2E-16 112.9 7.3 115 68-184 57-176 (293)
136 3ou2_A SAM-dependent methyltra 99.3 1.3E-11 4.4E-16 105.6 8.6 103 67-184 45-147 (218)
137 3m70_A Tellurite resistance pr 99.3 1.1E-11 3.7E-16 111.3 8.6 103 68-182 120-222 (286)
138 3e23_A Uncharacterized protein 99.3 3.4E-11 1.2E-15 103.0 11.3 100 67-183 42-141 (211)
139 1wzn_A SAM-dependent methyltra 99.2 7.6E-12 2.6E-16 109.9 7.2 107 67-184 40-146 (252)
140 3q7e_A Protein arginine N-meth 99.2 1.3E-11 4.6E-16 114.7 9.1 109 68-184 66-174 (349)
141 3ggd_A SAM-dependent methyltra 99.2 1.7E-11 5.9E-16 107.3 9.3 105 67-182 55-162 (245)
142 2ipx_A RRNA 2'-O-methyltransfe 99.2 1.7E-11 5.9E-16 106.9 9.2 104 67-183 76-182 (233)
143 2yx1_A Hypothetical protein MJ 99.2 2E-11 7E-16 112.9 10.1 101 67-186 194-294 (336)
144 1y8c_A S-adenosylmethionine-de 99.2 7.6E-12 2.6E-16 108.9 6.9 108 67-185 36-144 (246)
145 1xtp_A LMAJ004091AAA; SGPP, st 99.2 4.2E-11 1.4E-15 105.0 11.7 106 67-183 92-197 (254)
146 2fk8_A Methoxy mycolic acid sy 99.2 3.5E-11 1.2E-15 109.7 11.4 106 67-183 89-194 (318)
147 3sm3_A SAM-dependent methyltra 99.2 2.7E-11 9.3E-16 104.6 10.1 112 67-183 29-141 (235)
148 1dl5_A Protein-L-isoaspartate 99.2 2.8E-11 9.5E-16 110.9 10.3 103 67-185 74-177 (317)
149 3i9f_A Putative type 11 methyl 99.2 1.6E-11 5.4E-16 101.4 7.8 97 67-183 16-112 (170)
150 2o57_A Putative sarcosine dime 99.2 1.5E-11 5.2E-16 110.8 8.3 107 67-183 81-187 (297)
151 1ixk_A Methyltransferase; open 99.2 6.5E-11 2.2E-15 108.6 12.5 114 67-186 117-249 (315)
152 3tma_A Methyltransferase; thum 99.2 3E-11 1E-15 112.3 10.3 112 67-184 202-318 (354)
153 3kr9_A SAM-dependent methyltra 99.2 2.5E-11 8.6E-16 106.2 9.2 107 67-184 14-120 (225)
154 3pfg_A N-methyltransferase; N, 99.2 1E-11 3.5E-16 110.0 6.8 101 67-182 49-150 (263)
155 2pbf_A Protein-L-isoaspartate 99.2 2.1E-11 7.2E-16 105.6 8.6 105 67-183 79-193 (227)
156 2p8j_A S-adenosylmethionine-de 99.2 7.6E-12 2.6E-16 106.6 5.6 120 52-183 9-128 (209)
157 2kw5_A SLR1183 protein; struct 99.2 2E-11 7E-16 103.6 8.1 100 71-183 32-131 (202)
158 2yxe_A Protein-L-isoaspartate 99.2 4E-11 1.4E-15 102.8 10.0 103 67-185 76-179 (215)
159 3m33_A Uncharacterized protein 99.2 9.5E-12 3.3E-16 108.1 6.1 93 67-181 47-140 (226)
160 1r18_A Protein-L-isoaspartate( 99.2 3.2E-11 1.1E-15 104.8 9.3 106 67-184 83-195 (227)
161 3ocj_A Putative exported prote 99.2 8.3E-12 2.8E-16 113.4 5.8 110 67-183 117-227 (305)
162 3gdh_A Trimethylguanosine synt 99.2 3.3E-12 1.1E-16 111.7 2.9 103 68-182 78-180 (241)
163 1o9g_A RRNA methyltransferase; 99.2 7.1E-12 2.4E-16 110.6 5.0 111 68-181 51-212 (250)
164 3uwp_A Histone-lysine N-methyl 99.2 4.5E-11 1.5E-15 112.8 10.7 111 67-182 172-287 (438)
165 3g2m_A PCZA361.24; SAM-depende 99.2 9.9E-12 3.4E-16 112.4 6.1 110 68-185 82-192 (299)
166 1wy7_A Hypothetical protein PH 99.2 4.8E-10 1.6E-14 95.5 16.3 100 68-182 49-148 (207)
167 3lec_A NADB-rossmann superfami 99.2 3.5E-11 1.2E-15 105.5 9.2 106 67-183 20-125 (230)
168 1i1n_A Protein-L-isoaspartate 99.2 3.9E-11 1.3E-15 103.8 9.5 106 67-184 76-183 (226)
169 2fyt_A Protein arginine N-meth 99.2 4.2E-11 1.4E-15 110.9 10.3 107 67-181 63-169 (340)
170 2qy6_A UPF0209 protein YFCK; s 99.2 2.9E-11 9.9E-16 107.9 8.8 147 68-230 60-246 (257)
171 3vc1_A Geranyl diphosphate 2-C 99.2 2.2E-11 7.4E-16 111.0 8.1 106 67-183 116-221 (312)
172 1ri5_A MRNA capping enzyme; me 99.2 1.1E-11 3.9E-16 111.1 5.9 112 67-183 63-174 (298)
173 1ej0_A FTSJ; methyltransferase 99.2 3.9E-11 1.3E-15 98.5 8.6 119 67-204 21-153 (180)
174 4hc4_A Protein arginine N-meth 99.2 2.3E-11 7.9E-16 114.2 8.0 107 68-183 83-189 (376)
175 3p2e_A 16S rRNA methylase; met 99.2 2.3E-11 7.8E-16 106.3 7.5 110 67-181 23-137 (225)
176 3gnl_A Uncharacterized protein 99.2 4.5E-11 1.5E-15 105.7 9.3 106 67-183 20-125 (244)
177 3cgg_A SAM-dependent methyltra 99.2 4E-11 1.4E-15 100.3 8.6 102 67-183 45-147 (195)
178 2dul_A N(2),N(2)-dimethylguano 99.2 8E-11 2.7E-15 110.7 11.3 105 68-183 47-164 (378)
179 2qe6_A Uncharacterized protein 99.2 2.7E-10 9.3E-15 102.4 14.2 108 68-183 77-196 (274)
180 3axs_A Probable N(2),N(2)-dime 99.2 5E-11 1.7E-15 112.4 9.8 104 68-183 52-158 (392)
181 3q87_B N6 adenine specific DNA 99.2 7.5E-11 2.6E-15 98.2 9.8 96 68-183 23-123 (170)
182 3dou_A Ribosomal RNA large sub 99.2 1.3E-10 4.3E-15 99.0 11.3 151 55-230 14-180 (191)
183 1vbf_A 231AA long hypothetical 99.2 8.3E-11 2.8E-15 102.0 10.1 98 67-184 69-166 (231)
184 1ne2_A Hypothetical protein TA 99.2 3.1E-10 1E-14 96.4 13.4 96 67-181 50-145 (200)
185 1jg1_A PIMT;, protein-L-isoasp 99.2 5.2E-11 1.8E-15 104.0 8.7 102 67-185 90-191 (235)
186 2y1w_A Histone-arginine methyl 99.2 3.7E-11 1.3E-15 111.6 8.1 108 68-185 50-157 (348)
187 3fzg_A 16S rRNA methylase; met 99.2 2E-11 6.7E-16 103.8 5.6 113 53-182 39-151 (200)
188 2pjd_A Ribosomal RNA small sub 99.2 1.3E-11 4.3E-16 114.4 4.7 107 68-183 196-303 (343)
189 2gs9_A Hypothetical protein TT 99.2 3.3E-11 1.1E-15 103.0 6.8 98 68-184 36-133 (211)
190 3m6w_A RRNA methylase; rRNA me 99.2 1.7E-10 5.9E-15 111.0 12.5 114 67-186 100-232 (464)
191 3bxo_A N,N-dimethyltransferase 99.2 2.8E-11 9.5E-16 105.1 6.1 101 67-183 39-141 (239)
192 1g6q_1 HnRNP arginine N-methyl 99.2 6.7E-11 2.3E-15 109.0 8.9 107 68-182 38-144 (328)
193 3mq2_A 16S rRNA methyltransfer 99.2 5.7E-11 2E-15 102.2 7.8 114 67-183 26-140 (218)
194 3id6_C Fibrillarin-like rRNA/T 99.2 1.5E-10 5E-15 101.8 10.4 125 66-202 74-205 (232)
195 2aot_A HMT, histamine N-methyl 99.1 9.5E-11 3.2E-15 105.7 9.0 111 68-183 52-172 (292)
196 2avn_A Ubiquinone/menaquinone 99.1 8.3E-11 2.8E-15 104.2 8.2 102 67-186 53-155 (260)
197 3bgv_A MRNA CAP guanine-N7 met 99.1 3E-11 1E-15 110.0 5.4 116 67-183 33-155 (313)
198 3cc8_A Putative methyltransfer 99.1 6.2E-11 2.1E-15 101.8 7.1 101 67-184 31-131 (230)
199 1u2z_A Histone-lysine N-methyl 99.1 1.5E-10 5E-15 110.5 10.3 108 67-182 241-358 (433)
200 3iv6_A Putative Zn-dependent a 99.1 1.1E-10 3.9E-15 104.2 9.0 109 67-188 44-153 (261)
201 2h00_A Methyltransferase 10 do 99.1 2.5E-11 8.5E-16 107.1 4.4 82 68-152 65-150 (254)
202 3m4x_A NOL1/NOP2/SUN family pr 99.1 2.4E-10 8.1E-15 109.8 11.2 115 67-186 104-237 (456)
203 3ege_A Putative methyltransfer 99.1 8.3E-11 2.8E-15 104.4 6.3 98 67-183 33-130 (261)
204 3bt7_A TRNA (uracil-5-)-methyl 99.1 6.4E-10 2.2E-14 104.0 12.5 102 69-186 214-329 (369)
205 3dp7_A SAM-dependent methyltra 99.1 1.8E-10 6.1E-15 107.4 8.6 110 67-183 178-287 (363)
206 3bkx_A SAM-dependent methyltra 99.1 2.9E-10 9.8E-15 101.0 9.5 110 67-183 42-159 (275)
207 3hp7_A Hemolysin, putative; st 99.1 3.4E-10 1.2E-14 102.6 10.0 127 37-182 55-184 (291)
208 2plw_A Ribosomal RNA methyltra 99.1 5.6E-10 1.9E-14 94.5 10.8 119 67-204 21-171 (201)
209 2i62_A Nicotinamide N-methyltr 99.1 3.5E-11 1.2E-15 106.1 3.2 115 68-183 56-198 (265)
210 1p91_A Ribosomal RNA large sub 99.1 1.6E-10 5.6E-15 102.5 7.5 95 67-183 84-178 (269)
211 1uwv_A 23S rRNA (uracil-5-)-me 99.1 2.6E-09 8.9E-14 102.0 16.4 103 67-183 285-389 (433)
212 2frx_A Hypothetical protein YE 99.1 4.7E-10 1.6E-14 108.6 11.0 114 68-186 117-249 (479)
213 1sqg_A SUN protein, FMU protei 99.1 4.9E-10 1.7E-14 106.9 10.8 115 67-186 245-377 (429)
214 2a14_A Indolethylamine N-methy 99.1 1.9E-11 6.6E-16 108.8 0.5 114 68-183 55-197 (263)
215 3i53_A O-methyltransferase; CO 99.0 4.9E-10 1.7E-14 102.9 9.3 106 68-183 169-274 (332)
216 3gwz_A MMCR; methyltransferase 99.0 8.5E-10 2.9E-14 103.0 11.1 107 67-183 201-307 (369)
217 2nyu_A Putative ribosomal RNA 99.0 4.3E-10 1.5E-14 94.7 8.1 118 67-204 21-162 (196)
218 2jjq_A Uncharacterized RNA met 99.0 9.3E-10 3.2E-14 105.0 10.8 99 67-183 289-387 (425)
219 2yxl_A PH0851 protein, 450AA l 99.0 7.3E-10 2.5E-14 106.4 10.0 116 67-186 258-392 (450)
220 3bzb_A Uncharacterized protein 99.0 9.5E-10 3.2E-14 99.0 10.1 108 68-181 79-203 (281)
221 2f8l_A Hypothetical protein LM 99.0 3.8E-10 1.3E-14 104.4 7.4 128 68-203 130-276 (344)
222 2ip2_A Probable phenazine-spec 99.0 6.6E-10 2.3E-14 101.9 8.7 104 70-183 169-272 (334)
223 3mcz_A O-methyltransferase; ad 99.0 3E-10 1E-14 105.0 6.4 107 69-182 180-286 (352)
224 2ih2_A Modification methylase 99.0 2.9E-10 1E-14 107.4 6.2 121 67-203 38-184 (421)
225 1qzz_A RDMB, aclacinomycin-10- 99.0 8.1E-10 2.8E-14 102.8 8.9 107 67-183 181-287 (374)
226 3b3j_A Histone-arginine methyl 99.0 1.3E-10 4.4E-15 112.5 3.5 108 68-185 158-265 (480)
227 3cvo_A Methyltransferase-like 99.0 3.4E-09 1.2E-13 91.0 12.0 102 68-182 30-153 (202)
228 3tm4_A TRNA (guanine N2-)-meth 99.0 1.2E-09 4.1E-14 102.4 9.8 146 67-230 216-365 (373)
229 1vlm_A SAM-dependent methyltra 99.0 4.7E-10 1.6E-14 96.6 6.5 92 69-183 48-139 (219)
230 3sso_A Methyltransferase; macr 99.0 5.2E-10 1.8E-14 105.3 7.0 98 67-182 215-323 (419)
231 2wa2_A Non-structural protein 99.0 4.4E-10 1.5E-14 101.2 5.8 126 67-205 81-213 (276)
232 2g72_A Phenylethanolamine N-me 99.0 1.1E-10 3.7E-15 105.0 1.6 114 68-182 71-214 (289)
233 2r3s_A Uncharacterized protein 99.0 5E-10 1.7E-14 102.5 6.0 107 67-182 164-270 (335)
234 3opn_A Putative hemolysin; str 99.0 1.4E-09 4.9E-14 95.3 8.6 116 48-182 19-136 (232)
235 1x19_A CRTF-related protein; m 99.0 2.5E-09 8.4E-14 99.3 10.7 106 67-182 189-294 (359)
236 1tw3_A COMT, carminomycin 4-O- 98.9 6.8E-10 2.3E-14 102.9 6.3 107 67-183 182-288 (360)
237 3htx_A HEN1; HEN1, small RNA m 98.9 1.9E-09 6.3E-14 109.1 9.2 111 68-183 721-834 (950)
238 4e2x_A TCAB9; kijanose, tetron 98.9 6.4E-10 2.2E-14 105.2 5.2 103 67-183 106-208 (416)
239 2oxt_A Nucleoside-2'-O-methylt 98.9 4.5E-10 1.5E-14 100.6 3.4 126 67-205 73-205 (265)
240 4a6d_A Hydroxyindole O-methylt 98.9 3.5E-09 1.2E-13 98.4 9.5 104 68-182 179-282 (353)
241 3giw_A Protein of unknown func 98.9 1.3E-08 4.5E-13 91.3 12.0 128 68-200 78-217 (277)
242 2p41_A Type II methyltransfera 98.9 1.2E-09 4E-14 99.9 5.2 124 67-205 81-211 (305)
243 4azs_A Methyltransferase WBDD; 98.9 6.5E-09 2.2E-13 102.6 10.2 76 67-148 65-140 (569)
244 3lcv_B Sisomicin-gentamicin re 98.8 4.1E-09 1.4E-13 93.6 7.3 113 54-182 123-235 (281)
245 3ll7_A Putative methyltransfer 98.8 1E-08 3.5E-13 97.0 9.8 115 69-189 94-214 (410)
246 2b9e_A NOL1/NOP2/SUN domain fa 98.8 2.4E-08 8E-13 91.3 11.8 115 67-186 101-237 (309)
247 3lst_A CALO1 methyltransferase 98.8 5.5E-09 1.9E-13 96.6 7.7 104 67-183 183-286 (348)
248 2xyq_A Putative 2'-O-methyl tr 98.8 1E-08 3.6E-13 92.8 9.4 127 52-204 45-189 (290)
249 1zq9_A Probable dimethyladenos 98.8 1.6E-08 5.5E-13 91.2 10.4 78 67-153 27-104 (285)
250 3ldg_A Putative uncharacterize 98.8 1.1E-08 3.7E-13 96.3 9.5 110 68-183 194-343 (384)
251 1fp2_A Isoflavone O-methyltran 98.8 6E-09 2E-13 96.5 7.3 99 67-183 187-288 (352)
252 3fut_A Dimethyladenosine trans 98.8 1.4E-08 4.9E-13 91.1 9.3 96 71-182 49-144 (271)
253 3gru_A Dimethyladenosine trans 98.8 1.2E-08 4.1E-13 92.7 8.8 77 67-153 49-125 (295)
254 1af7_A Chemotaxis receptor met 98.8 2.3E-09 8E-14 96.4 3.9 112 68-183 105-252 (274)
255 1fp1_D Isoliquiritigenin 2'-O- 98.8 4.7E-09 1.6E-13 98.0 5.8 98 67-182 208-305 (372)
256 1m6y_A S-adenosyl-methyltransf 98.8 3.5E-08 1.2E-12 89.9 11.2 91 53-151 14-107 (301)
257 2r6z_A UPF0341 protein in RSP 98.8 7.7E-09 2.6E-13 92.2 6.6 81 68-153 83-172 (258)
258 3ldu_A Putative methylase; str 98.8 5.1E-09 1.7E-13 98.6 5.6 112 68-185 195-346 (385)
259 3reo_A (ISO)eugenol O-methyltr 98.8 7.9E-09 2.7E-13 96.5 6.7 99 67-183 202-300 (368)
260 3k0b_A Predicted N6-adenine-sp 98.8 6.9E-09 2.4E-13 97.9 6.4 111 67-183 200-350 (393)
261 3vyw_A MNMC2; tRNA wobble urid 98.7 4.7E-08 1.6E-12 88.8 10.9 146 68-230 96-259 (308)
262 3p9c_A Caffeic acid O-methyltr 98.7 1.2E-08 4.1E-13 95.2 6.9 99 67-183 200-298 (364)
263 3frh_A 16S rRNA methylase; met 98.7 3.2E-08 1.1E-12 87.0 8.6 102 67-182 104-205 (253)
264 2zfu_A Nucleomethylin, cerebra 98.7 1.3E-08 4.3E-13 87.1 5.7 123 67-230 66-190 (215)
265 2h1r_A Dimethyladenosine trans 98.7 2E-08 6.8E-13 91.3 7.1 77 67-153 41-117 (299)
266 2okc_A Type I restriction enzy 98.7 1.4E-08 4.7E-13 97.3 5.9 111 68-183 171-307 (445)
267 3tqs_A Ribosomal RNA small sub 98.7 6.2E-08 2.1E-12 86.1 9.3 77 67-152 28-106 (255)
268 1qam_A ERMC' methyltransferase 98.7 8.9E-08 3.1E-12 84.3 9.9 76 67-152 29-104 (244)
269 2oyr_A UPF0341 protein YHIQ; a 98.6 3.9E-08 1.3E-12 87.6 7.2 82 70-154 90-176 (258)
270 1zg3_A Isoflavanone 4'-O-methy 98.6 3.2E-08 1.1E-12 91.8 6.5 97 68-182 193-292 (358)
271 3ftd_A Dimethyladenosine trans 98.6 1.9E-07 6.3E-12 82.7 10.5 100 67-183 30-131 (249)
272 2ld4_A Anamorsin; methyltransf 98.6 4.8E-08 1.6E-12 81.0 5.3 89 67-183 11-101 (176)
273 2oo3_A Protein involved in cat 98.5 3.3E-07 1.1E-11 82.2 10.3 122 68-203 91-216 (283)
274 2ar0_A M.ecoki, type I restric 98.5 8.8E-08 3E-12 94.0 7.2 113 68-183 169-312 (541)
275 3lkd_A Type I restriction-modi 98.5 3.7E-07 1.3E-11 89.5 11.3 134 68-204 221-380 (542)
276 1yub_A Ermam, rRNA methyltrans 98.5 9.6E-10 3.3E-14 96.9 -6.4 77 67-153 28-104 (245)
277 3khk_A Type I restriction-modi 98.5 4.3E-08 1.5E-12 96.2 4.3 134 67-204 243-418 (544)
278 4fzv_A Putative methyltransfer 98.5 2.2E-06 7.7E-11 79.7 15.8 135 67-202 147-305 (359)
279 2wk1_A NOVP; transferase, O-me 98.5 1.3E-07 4.5E-12 85.2 6.7 109 67-183 105-244 (282)
280 3s1s_A Restriction endonucleas 98.5 4.3E-07 1.5E-11 91.8 10.7 136 68-204 321-488 (878)
281 3v97_A Ribosomal RNA large sub 98.5 2.3E-07 7.9E-12 93.7 8.2 113 68-183 190-347 (703)
282 3evf_A RNA-directed RNA polyme 98.3 3E-07 1E-11 82.0 4.7 150 67-230 73-226 (277)
283 3uzu_A Ribosomal RNA small sub 98.3 1.4E-06 4.7E-11 78.4 8.7 78 67-152 41-124 (279)
284 1qyr_A KSGA, high level kasuga 98.3 8.7E-07 3E-11 78.5 7.1 78 68-153 21-101 (252)
285 3ua3_A Protein arginine N-meth 98.3 1.3E-06 4.6E-11 87.0 8.9 108 69-182 410-533 (745)
286 4gqb_A Protein arginine N-meth 98.3 2.8E-07 9.5E-12 91.6 3.8 103 69-180 358-464 (637)
287 3gcz_A Polyprotein; flavivirus 98.3 3.2E-07 1.1E-11 81.9 3.6 148 67-230 89-243 (282)
288 1wg8_A Predicted S-adenosylmet 98.2 7.1E-06 2.4E-10 73.5 10.1 84 55-151 12-98 (285)
289 3eld_A Methyltransferase; flav 98.1 7.4E-06 2.5E-10 73.6 8.6 158 55-230 71-233 (300)
290 3ps9_A TRNA 5-methylaminomethy 98.1 1.4E-05 4.9E-10 80.0 11.4 114 69-183 67-219 (676)
291 3pvc_A TRNA 5-methylaminomethy 98.0 3.2E-05 1.1E-09 77.7 12.3 115 68-183 58-211 (689)
292 2px2_A Genome polyprotein [con 97.8 5.4E-05 1.9E-09 66.7 8.3 134 55-205 63-203 (269)
293 3r24_A NSP16, 2'-O-methyl tran 97.7 9.2E-05 3.1E-09 66.4 7.3 150 52-230 91-256 (344)
294 3p8z_A Mtase, non-structural p 97.6 0.00028 9.5E-09 61.4 9.6 140 52-206 65-207 (267)
295 3ufb_A Type I restriction-modi 97.6 0.00013 4.5E-09 71.2 8.0 133 68-204 217-384 (530)
296 3tka_A Ribosomal RNA small sub 97.5 0.00027 9.1E-09 64.8 8.8 75 68-150 57-136 (347)
297 3lkz_A Non-structural protein 97.5 0.00024 8.1E-09 63.7 7.8 138 55-206 84-225 (321)
298 1i4w_A Mitochondrial replicati 97.5 0.00011 3.7E-09 68.1 5.8 59 69-134 59-117 (353)
299 4auk_A Ribosomal RNA large sub 97.4 0.00037 1.3E-08 64.8 8.7 72 67-153 210-281 (375)
300 2efj_A 3,7-dimethylxanthine me 97.3 0.0008 2.7E-08 62.9 8.9 109 69-183 53-225 (384)
301 3b5i_A S-adenosyl-L-methionine 97.1 0.00064 2.2E-08 63.4 6.7 117 67-183 51-225 (374)
302 2zig_A TTHA0409, putative modi 97.1 0.00057 2E-08 61.5 5.9 47 67-115 234-280 (297)
303 1f8f_A Benzyl alcohol dehydrog 97.1 0.00096 3.3E-08 61.6 7.4 99 67-182 189-288 (371)
304 1m6e_X S-adenosyl-L-methionnin 97.1 0.00075 2.6E-08 62.6 6.5 115 66-183 49-209 (359)
305 3m6i_A L-arabinitol 4-dehydrog 97.1 0.0044 1.5E-07 56.9 11.6 99 67-183 178-283 (363)
306 1pl8_A Human sorbitol dehydrog 97.0 0.0025 8.7E-08 58.5 9.6 97 67-183 170-273 (356)
307 2k4m_A TR8_protein, UPF0146 pr 97.0 0.0005 1.7E-08 55.5 4.0 80 67-175 34-115 (153)
308 1g55_A DNA cytosine methyltran 97.0 0.0028 9.5E-08 58.3 9.2 147 69-230 2-168 (343)
309 3s2e_A Zinc-containing alcohol 96.9 0.0017 5.7E-08 59.2 7.6 98 67-183 165-263 (340)
310 4ej6_A Putative zinc-binding d 96.9 0.002 6.9E-08 59.6 7.4 100 67-183 181-284 (370)
311 2c7p_A Modification methylase 96.8 0.033 1.1E-06 50.8 15.1 146 69-230 11-172 (327)
312 3tos_A CALS11; methyltransfera 96.8 0.014 4.8E-07 51.5 11.9 109 67-183 68-217 (257)
313 3fpc_A NADP-dependent alcohol 96.7 0.0018 6.2E-08 59.3 5.9 99 67-182 165-265 (352)
314 3uko_A Alcohol dehydrogenase c 96.7 0.0034 1.2E-07 58.1 7.6 100 67-183 192-295 (378)
315 1boo_A Protein (N-4 cytosine-s 96.6 0.0021 7.2E-08 58.6 5.7 67 120-186 11-87 (323)
316 1cdo_A Alcohol dehydrogenase; 96.5 0.0069 2.3E-07 55.9 8.3 99 67-182 191-293 (374)
317 2jhf_A Alcohol dehydrogenase E 96.5 0.0082 2.8E-07 55.4 8.7 99 67-182 190-292 (374)
318 3ip1_A Alcohol dehydrogenase, 96.5 0.007 2.4E-07 56.6 8.3 101 67-183 212-318 (404)
319 2dph_A Formaldehyde dismutase; 96.5 0.0029 1E-07 59.0 5.6 108 67-182 184-298 (398)
320 4eez_A Alcohol dehydrogenase 1 96.5 0.012 4.1E-07 53.4 9.7 100 67-183 162-263 (348)
321 1p0f_A NADP-dependent alcohol 96.5 0.0066 2.3E-07 56.0 8.0 96 67-182 190-292 (373)
322 1e3i_A Alcohol dehydrogenase, 96.5 0.0074 2.5E-07 55.7 8.2 100 67-183 194-297 (376)
323 1e3j_A NADP(H)-dependent ketos 96.5 0.01 3.5E-07 54.2 9.1 99 67-183 167-271 (352)
324 3jv7_A ADH-A; dehydrogenase, n 96.4 0.0093 3.2E-07 54.3 8.6 98 67-182 170-269 (345)
325 2fzw_A Alcohol dehydrogenase c 96.4 0.008 2.7E-07 55.4 8.0 99 67-182 189-291 (373)
326 4a2c_A Galactitol-1-phosphate 96.4 0.014 4.8E-07 53.0 9.4 100 67-183 159-260 (346)
327 3g7u_A Cytosine-specific methy 96.3 0.0052 1.8E-07 57.3 6.4 121 70-203 3-141 (376)
328 3fwz_A Inner membrane protein 96.3 0.025 8.6E-07 44.5 9.6 97 69-184 7-106 (140)
329 1kol_A Formaldehyde dehydrogen 96.3 0.02 6.9E-07 53.2 10.4 108 67-182 184-299 (398)
330 2b5w_A Glucose dehydrogenase; 96.3 0.012 4.1E-07 53.9 8.5 94 70-183 174-273 (357)
331 2zig_A TTHA0409, putative modi 96.3 0.0062 2.1E-07 54.6 6.3 67 120-186 18-100 (297)
332 1eg2_A Modification methylase 96.2 0.0044 1.5E-07 56.4 5.2 66 121-186 36-109 (319)
333 1pjc_A Protein (L-alanine dehy 96.2 0.049 1.7E-06 50.2 12.0 99 68-181 166-265 (361)
334 1g60_A Adenine-specific methyl 96.1 0.0051 1.7E-07 54.1 4.6 61 123-183 4-74 (260)
335 1vj0_A Alcohol dehydrogenase, 96.0 0.01 3.5E-07 54.9 6.7 96 67-182 194-297 (380)
336 2d8a_A PH0655, probable L-thre 96.0 0.0097 3.3E-07 54.3 6.4 98 68-182 167-266 (348)
337 2dq4_A L-threonine 3-dehydroge 96.0 0.0042 1.4E-07 56.7 3.9 98 68-183 164-262 (343)
338 1uuf_A YAHK, zinc-type alcohol 95.9 0.032 1.1E-06 51.4 9.7 94 67-182 193-287 (369)
339 1g60_A Adenine-specific methyl 95.9 0.0086 2.9E-07 52.6 5.4 46 67-114 211-256 (260)
340 4dvj_A Putative zinc-dependent 95.9 0.018 6.3E-07 52.9 7.8 97 68-182 171-269 (363)
341 4b7c_A Probable oxidoreductase 95.9 0.013 4.5E-07 53.0 6.6 98 67-182 148-247 (336)
342 1pqw_A Polyketide synthase; ro 95.8 0.011 3.6E-07 49.3 5.2 97 67-182 37-136 (198)
343 1rjw_A ADH-HT, alcohol dehydro 95.8 0.016 5.5E-07 52.7 6.8 97 67-182 163-260 (339)
344 2h6e_A ADH-4, D-arabinose 1-de 95.7 0.029 9.8E-07 51.0 8.2 94 68-182 170-268 (344)
345 3uog_A Alcohol dehydrogenase; 95.7 0.017 5.7E-07 53.1 6.6 95 67-183 188-287 (363)
346 2vhw_A Alanine dehydrogenase; 95.6 0.11 3.6E-06 48.2 11.8 97 68-181 167-266 (377)
347 1v3u_A Leukotriene B4 12- hydr 95.6 0.028 9.7E-07 50.7 7.5 97 67-182 144-243 (333)
348 3fbg_A Putative arginate lyase 95.5 0.029 1E-06 51.1 7.4 96 68-182 150-247 (346)
349 2hcy_A Alcohol dehydrogenase 1 95.4 0.02 6.9E-07 52.1 6.1 98 67-182 168-268 (347)
350 4h0n_A DNMT2; SAH binding, tra 95.3 0.099 3.4E-06 47.7 10.3 149 69-230 3-168 (333)
351 2c0c_A Zinc binding alcohol de 95.3 0.025 8.6E-07 51.9 6.2 98 67-183 162-261 (362)
352 3me5_A Cytosine-specific methy 95.2 0.29 1E-05 46.9 13.7 125 69-203 88-250 (482)
353 4eye_A Probable oxidoreductase 95.2 0.026 8.8E-07 51.4 6.0 96 67-182 158-256 (342)
354 3l9w_A Glutathione-regulated p 95.2 0.073 2.5E-06 50.1 9.2 96 69-183 4-102 (413)
355 3qwb_A Probable quinone oxidor 95.2 0.021 7.2E-07 51.6 5.4 97 67-182 147-246 (334)
356 2j3h_A NADP-dependent oxidored 95.2 0.031 1.1E-06 50.7 6.4 98 67-182 154-254 (345)
357 2zb4_A Prostaglandin reductase 95.1 0.035 1.2E-06 50.7 6.7 96 70-182 162-259 (357)
358 3two_A Mannitol dehydrogenase; 95.1 0.054 1.9E-06 49.2 7.8 90 67-183 175-265 (348)
359 2y0c_A BCEC, UDP-glucose dehyd 95.1 0.23 7.7E-06 47.6 12.4 109 68-184 7-129 (478)
360 1jvb_A NAD(H)-dependent alcoho 95.0 0.026 8.8E-07 51.4 5.3 98 67-182 169-270 (347)
361 3p2y_A Alanine dehydrogenase/p 95.0 0.11 3.6E-06 48.4 9.5 107 68-181 183-300 (381)
362 3jyn_A Quinone oxidoreductase; 95.0 0.022 7.4E-07 51.4 4.7 98 67-183 139-239 (325)
363 2eez_A Alanine dehydrogenase; 95.0 0.2 6.9E-06 46.1 11.4 97 68-181 165-264 (369)
364 3gms_A Putative NADPH:quinone 94.9 0.015 5.2E-07 52.8 3.7 98 67-183 143-243 (340)
365 4dup_A Quinone oxidoreductase; 94.9 0.025 8.4E-07 51.8 5.1 97 67-182 166-264 (353)
366 1yqd_A Sinapyl alcohol dehydro 94.8 0.11 3.8E-06 47.6 9.2 94 68-182 187-281 (366)
367 2g1u_A Hypothetical protein TM 94.7 0.098 3.4E-06 41.7 7.5 101 67-185 17-120 (155)
368 2eih_A Alcohol dehydrogenase; 94.7 0.058 2E-06 48.9 6.9 98 67-183 165-265 (343)
369 3gqv_A Enoyl reductase; medium 94.6 0.12 3.9E-06 47.6 8.7 97 67-182 163-262 (371)
370 1id1_A Putative potassium chan 94.6 0.24 8.3E-06 39.2 9.6 100 69-186 3-108 (153)
371 2cf5_A Atccad5, CAD, cinnamyl 94.5 0.084 2.9E-06 48.2 7.7 94 68-182 180-274 (357)
372 4dio_A NAD(P) transhydrogenase 94.5 0.2 6.7E-06 47.0 10.2 108 68-181 189-310 (405)
373 3llv_A Exopolyphosphatase-rela 94.4 0.4 1.4E-05 37.1 10.4 94 69-184 6-104 (141)
374 1wly_A CAAR, 2-haloacrylate re 94.4 0.065 2.2E-06 48.4 6.5 98 67-183 144-244 (333)
375 3gaz_A Alcohol dehydrogenase s 94.3 0.069 2.4E-06 48.5 6.5 95 67-183 149-246 (343)
376 1piw_A Hypothetical zinc-type 94.2 0.059 2E-06 49.3 5.7 94 67-182 178-275 (360)
377 2cdc_A Glucose dehydrogenase g 94.2 0.061 2.1E-06 49.3 5.8 93 69-183 181-278 (366)
378 3ggo_A Prephenate dehydrogenas 94.1 0.34 1.2E-05 43.6 10.7 91 69-181 33-126 (314)
379 2qrv_A DNA (cytosine-5)-methyl 94.1 0.12 4.3E-06 46.2 7.6 75 67-151 14-92 (295)
380 3qv2_A 5-cytosine DNA methyltr 94.1 1 3.4E-05 40.9 13.7 149 68-230 9-179 (327)
381 3goh_A Alcohol dehydrogenase, 94.0 0.048 1.6E-06 48.8 4.8 87 67-182 141-228 (315)
382 2j8z_A Quinone oxidoreductase; 93.9 0.068 2.3E-06 48.8 5.6 98 67-183 161-261 (354)
383 1yb5_A Quinone oxidoreductase; 93.8 0.1 3.4E-06 47.6 6.5 98 67-183 169-269 (351)
384 1iz0_A Quinone oxidoreductase; 93.8 0.15 5.2E-06 45.2 7.5 91 67-182 124-217 (302)
385 1qor_A Quinone oxidoreductase; 93.7 0.063 2.2E-06 48.3 4.9 98 67-183 139-239 (327)
386 1jw9_B Molybdopterin biosynthe 93.6 0.13 4.3E-06 44.9 6.6 34 69-102 31-65 (249)
387 3l4b_C TRKA K+ channel protien 93.6 0.47 1.6E-05 39.8 10.0 95 71-185 2-101 (218)
388 1x13_A NAD(P) transhydrogenase 93.6 0.21 7.1E-06 46.7 8.4 106 68-181 171-290 (401)
389 2o3j_A UDP-glucose 6-dehydroge 93.6 1.1 3.7E-05 42.8 13.6 111 70-186 10-138 (481)
390 1l7d_A Nicotinamide nucleotide 93.6 0.31 1.1E-05 45.1 9.5 107 68-181 171-292 (384)
391 3gg2_A Sugar dehydrogenase, UD 93.6 1.3 4.5E-05 41.9 14.0 107 70-184 3-123 (450)
392 2vz8_A Fatty acid synthase; tr 93.4 0.021 7.2E-07 65.1 1.4 103 69-183 1241-1348(2512)
393 3c85_A Putative glutathione-re 93.2 0.46 1.6E-05 38.6 9.0 94 69-183 39-139 (183)
394 2vn8_A Reticulon-4-interacting 93.1 0.16 5.4E-06 46.6 6.7 97 67-183 182-280 (375)
395 3dfz_A SIRC, precorrin-2 dehyd 93.0 0.32 1.1E-05 41.7 8.1 100 56-183 18-121 (223)
396 3ubt_Y Modification methylase 92.9 0.18 6.3E-06 45.2 6.7 145 71-230 2-162 (331)
397 1boo_A Protein (N-4 cytosine-s 92.8 0.044 1.5E-06 49.7 2.3 62 67-135 251-312 (323)
398 3h8v_A Ubiquitin-like modifier 92.8 0.13 4.6E-06 46.0 5.5 34 69-102 36-70 (292)
399 3nx4_A Putative oxidoreductase 92.7 0.13 4.6E-06 45.9 5.4 90 71-182 149-240 (324)
400 1lss_A TRK system potassium up 92.7 1.3 4.4E-05 33.6 10.5 93 69-181 4-101 (140)
401 2py6_A Methyltransferase FKBM; 92.6 0.22 7.4E-06 46.7 7.0 48 67-114 225-274 (409)
402 1xa0_A Putative NADPH dependen 92.6 0.099 3.4E-06 47.0 4.4 92 71-182 152-245 (328)
403 1f0y_A HCDH, L-3-hydroxyacyl-C 92.1 1.2 4.2E-05 39.3 11.0 102 69-183 15-136 (302)
404 2q3e_A UDP-glucose 6-dehydroge 92.1 2.5 8.4E-05 40.0 13.7 108 70-183 6-131 (467)
405 3cea_A MYO-inositol 2-dehydrog 92.0 1.6 5.4E-05 39.2 11.8 72 68-152 7-81 (346)
406 2aef_A Calcium-gated potassium 92.0 0.91 3.1E-05 38.4 9.6 97 68-186 8-108 (234)
407 4a0s_A Octenoyl-COA reductase/ 92.0 0.36 1.2E-05 45.3 7.7 97 67-182 219-335 (447)
408 3ic5_A Putative saccharopine d 92.0 1.7 5.9E-05 31.8 10.2 68 69-150 5-77 (118)
409 2dpo_A L-gulonate 3-dehydrogen 91.8 0.5 1.7E-05 42.7 8.1 103 69-184 6-124 (319)
410 4g65_A TRK system potassium up 91.7 1.6 5.3E-05 41.5 11.8 75 67-152 233-310 (461)
411 4g65_A TRK system potassium up 91.6 0.71 2.4E-05 43.9 9.3 70 68-149 2-75 (461)
412 3mog_A Probable 3-hydroxybutyr 91.5 0.55 1.9E-05 45.0 8.5 103 69-185 5-122 (483)
413 1zej_A HBD-9, 3-hydroxyacyl-CO 91.5 0.48 1.7E-05 42.3 7.6 98 67-185 10-109 (293)
414 4a27_A Synaptic vesicle membra 91.4 0.16 5.4E-06 46.2 4.4 96 67-183 141-238 (349)
415 4a7p_A UDP-glucose dehydrogena 91.4 1.5 5E-05 41.5 11.2 140 68-219 7-161 (446)
416 3swr_A DNA (cytosine-5)-methyl 90.9 11 0.00038 39.2 18.0 150 69-230 540-721 (1002)
417 3krt_A Crotonyl COA reductase; 90.7 0.34 1.2E-05 45.7 6.1 104 67-182 227-343 (456)
418 3ado_A Lambda-crystallin; L-gu 90.7 0.76 2.6E-05 41.6 8.1 106 67-185 4-125 (319)
419 1zud_1 Adenylyltransferase THI 90.7 0.33 1.1E-05 42.2 5.5 34 69-102 28-62 (251)
420 4e12_A Diketoreductase; oxidor 90.6 0.94 3.2E-05 39.8 8.5 104 69-185 4-123 (283)
421 4e21_A 6-phosphogluconate dehy 90.5 1.6 5.4E-05 40.0 10.2 92 69-183 22-115 (358)
422 4hkt_A Inositol 2-dehydrogenas 90.4 3.1 0.0001 37.1 12.0 68 70-152 4-73 (331)
423 3oig_A Enoyl-[acyl-carrier-pro 90.4 3.9 0.00013 34.9 12.3 78 68-151 6-96 (266)
424 1zcj_A Peroxisomal bifunctiona 90.2 2.8 9.5E-05 39.7 11.9 102 69-184 37-151 (463)
425 1lnq_A MTHK channels, potassiu 90.0 2.3 7.9E-05 38.1 10.8 95 69-185 115-213 (336)
426 3ezy_A Dehydrogenase; structur 90.0 2.6 8.9E-05 37.8 11.2 70 70-152 3-74 (344)
427 2g5c_A Prephenate dehydrogenas 89.9 1.5 5.1E-05 38.1 9.2 90 70-181 2-94 (281)
428 3h2s_A Putative NADH-flavin re 89.8 1.4 4.8E-05 36.4 8.6 99 71-182 2-103 (224)
429 3grk_A Enoyl-(acyl-carrier-pro 89.7 7.6 0.00026 33.9 13.8 76 68-151 30-118 (293)
430 3lyl_A 3-oxoacyl-(acyl-carrier 89.7 4.2 0.00014 34.2 11.8 76 68-151 4-91 (247)
431 3pqe_A L-LDH, L-lactate dehydr 89.7 6.3 0.00022 35.5 13.4 108 68-182 4-121 (326)
432 3q2i_A Dehydrogenase; rossmann 89.7 2.8 9.6E-05 37.8 11.2 71 68-152 12-85 (354)
433 3ce6_A Adenosylhomocysteinase; 89.6 1.1 3.8E-05 43.0 8.6 87 68-182 273-360 (494)
434 3o38_A Short chain dehydrogena 89.6 3.4 0.00012 35.3 11.2 78 68-151 21-110 (266)
435 3rui_A Ubiquitin-like modifier 89.6 0.63 2.1E-05 42.5 6.6 34 69-102 34-68 (340)
436 3f1l_A Uncharacterized oxidore 89.6 4.9 0.00017 34.1 12.2 79 68-151 11-101 (252)
437 1zh8_A Oxidoreductase; TM0312, 89.5 3.4 0.00012 37.1 11.5 73 67-152 16-92 (340)
438 1h2b_A Alcohol dehydrogenase; 89.5 0.46 1.6E-05 43.2 5.7 94 67-183 185-285 (359)
439 3guy_A Short-chain dehydrogena 89.4 3 0.0001 34.9 10.5 71 70-151 2-81 (230)
440 3d0o_A L-LDH 1, L-lactate dehy 89.4 3.4 0.00012 37.0 11.3 109 68-186 5-125 (317)
441 3db2_A Putative NADPH-dependen 89.3 2.1 7.2E-05 38.6 10.0 72 68-153 4-77 (354)
442 3k96_A Glycerol-3-phosphate de 89.3 2.9 9.8E-05 38.2 10.9 98 69-182 29-132 (356)
443 1tt7_A YHFP; alcohol dehydroge 89.2 0.21 7.1E-06 44.8 3.1 90 71-182 153-246 (330)
444 3rc1_A Sugar 3-ketoreductase; 89.2 4.3 0.00015 36.6 12.0 71 68-152 26-99 (350)
445 2gn4_A FLAA1 protein, UDP-GLCN 89.0 1.4 4.7E-05 39.7 8.5 76 68-152 20-101 (344)
446 3eod_A Protein HNR; response r 88.9 5.5 0.00019 29.3 12.1 79 92-181 7-85 (130)
447 4e7p_A Response regulator; DNA 88.8 4.8 0.00017 30.6 10.6 78 93-181 21-99 (150)
448 3sju_A Keto reductase; short-c 88.8 4.9 0.00017 34.8 11.7 78 68-151 23-110 (279)
449 3h7a_A Short chain dehydrogena 88.7 4.4 0.00015 34.5 11.2 76 68-151 6-92 (252)
450 3tqh_A Quinone oxidoreductase; 88.6 0.82 2.8E-05 40.8 6.6 91 67-182 151-244 (321)
451 3oj0_A Glutr, glutamyl-tRNA re 88.6 1.7 6E-05 33.7 7.8 67 69-153 21-91 (144)
452 4gsl_A Ubiquitin-like modifier 88.4 0.59 2E-05 46.0 5.8 34 69-102 326-360 (615)
453 3imf_A Short chain dehydrogena 88.4 3.4 0.00011 35.3 10.3 77 69-151 6-92 (257)
454 3hdj_A Probable ornithine cycl 88.4 1 3.5E-05 40.5 7.1 75 65-152 117-193 (313)
455 3tjr_A Short chain dehydrogena 88.4 4.6 0.00016 35.5 11.4 78 68-151 30-117 (301)
456 3l77_A Short-chain alcohol deh 88.2 9.2 0.00032 31.7 12.8 78 69-151 2-89 (235)
457 3kht_A Response regulator; PSI 88.1 5 0.00017 30.2 10.2 69 93-171 6-75 (144)
458 3qsg_A NAD-binding phosphogluc 88.1 5.6 0.00019 35.3 11.8 108 68-203 23-134 (312)
459 3pk0_A Short-chain dehydrogena 88.0 5.4 0.00018 34.1 11.3 79 68-151 9-97 (262)
460 3o26_A Salutaridine reductase; 87.9 1.1 3.9E-05 39.0 7.1 79 68-151 11-100 (311)
461 1mv8_A GMD, GDP-mannose 6-dehy 87.9 7.9 0.00027 36.1 13.3 105 71-183 2-123 (436)
462 2rir_A Dipicolinate synthase, 87.8 5.5 0.00019 35.1 11.5 86 68-182 156-245 (300)
463 3rkr_A Short chain oxidoreduct 87.6 4.4 0.00015 34.6 10.6 79 68-152 28-116 (262)
464 3hv2_A Response regulator/HD d 87.6 4.8 0.00016 30.8 9.9 77 93-181 15-91 (153)
465 3d4o_A Dipicolinate synthase s 87.6 6.5 0.00022 34.5 11.8 87 68-183 154-244 (293)
466 1eg2_A Modification methylase 87.5 0.59 2E-05 42.2 5.0 47 67-115 241-290 (319)
467 3pi7_A NADH oxidoreductase; gr 87.5 0.57 1.9E-05 42.4 4.9 94 70-182 166-262 (349)
468 3dqp_A Oxidoreductase YLBE; al 87.4 4.4 0.00015 33.4 10.1 67 71-152 2-73 (219)
469 2km1_A Protein DRE2; yeast, an 87.3 0.54 1.9E-05 37.1 4.0 75 101-181 21-96 (136)
470 3ktd_A Prephenate dehydrogenas 87.3 1.1 3.6E-05 41.0 6.5 95 67-185 6-102 (341)
471 3i1j_A Oxidoreductase, short c 87.3 5.1 0.00017 33.6 10.7 79 68-151 13-103 (247)
472 2c07_A 3-oxoacyl-(acyl-carrier 87.2 12 0.00042 32.2 13.3 77 69-151 44-130 (285)
473 3qiv_A Short-chain dehydrogena 87.2 5.1 0.00018 33.8 10.7 78 68-151 8-95 (253)
474 3euw_A MYO-inositol dehydrogen 87.2 5.2 0.00018 35.8 11.1 70 69-152 4-75 (344)
475 3rih_A Short chain dehydrogena 87.0 3 0.0001 36.7 9.3 79 68-151 40-128 (293)
476 3ioy_A Short-chain dehydrogena 87.0 9.1 0.00031 33.9 12.6 80 68-151 7-96 (319)
477 3b1f_A Putative prephenate deh 87.0 1.8 6.3E-05 37.7 7.8 90 69-180 6-98 (290)
478 3ucx_A Short chain dehydrogena 87.0 10 0.00035 32.3 12.6 75 68-150 10-96 (264)
479 3ilh_A Two component response 86.9 6.2 0.00021 29.4 10.1 80 92-181 9-97 (146)
480 3ijr_A Oxidoreductase, short c 86.9 6.8 0.00023 34.1 11.6 108 69-182 47-181 (291)
481 3r1i_A Short-chain type dehydr 86.9 4.5 0.00015 35.1 10.3 78 68-151 31-118 (276)
482 3pxx_A Carveol dehydrogenase; 86.9 14 0.00047 31.6 13.6 78 68-151 9-108 (287)
483 3lf2_A Short chain oxidoreduct 86.9 9 0.00031 32.7 12.2 80 68-151 7-96 (265)
484 2ixa_A Alpha-N-acetylgalactosa 86.9 5.7 0.0002 37.1 11.6 78 68-152 19-101 (444)
485 3rqi_A Response regulator prot 86.8 5 0.00017 32.0 9.9 77 93-181 8-84 (184)
486 3vku_A L-LDH, L-lactate dehydr 86.8 14 0.00049 33.2 13.7 107 67-182 7-124 (326)
487 3gt0_A Pyrroline-5-carboxylate 86.7 2 6.8E-05 36.7 7.7 90 70-182 3-96 (247)
488 3m2t_A Probable dehydrogenase; 86.7 2.6 8.8E-05 38.3 8.9 70 69-151 5-77 (359)
489 3lua_A Response regulator rece 86.7 4 0.00014 30.6 8.8 79 93-181 5-87 (140)
490 2hmt_A YUAA protein; RCK, KTN, 86.7 2.2 7.5E-05 32.4 7.3 94 69-183 6-104 (144)
491 1dlj_A UDP-glucose dehydrogena 86.6 3.6 0.00012 38.1 10.0 106 71-186 2-120 (402)
492 3moi_A Probable dehydrogenase; 86.6 4.5 0.00015 37.0 10.6 70 69-152 2-74 (387)
493 4gwg_A 6-phosphogluconate dehy 86.4 2.8 9.4E-05 40.1 9.2 97 70-183 5-103 (484)
494 4e6p_A Probable sorbitol dehyd 86.3 11 0.00036 32.1 12.3 75 68-151 7-91 (259)
495 2jah_A Clavulanic acid dehydro 86.3 12 0.0004 31.6 12.5 77 69-151 7-93 (247)
496 3eul_A Possible nitrate/nitrit 86.3 4.4 0.00015 30.9 8.9 81 91-181 14-94 (152)
497 2rhc_B Actinorhodin polyketide 86.2 10 0.00036 32.5 12.3 77 69-151 22-108 (277)
498 2rjn_A Response regulator rece 86.2 9.4 0.00032 29.0 11.0 77 93-181 8-84 (154)
499 1yb1_A 17-beta-hydroxysteroid 86.1 10 0.00035 32.4 12.1 78 68-151 30-117 (272)
500 3pid_A UDP-glucose 6-dehydroge 86.1 2.5 8.4E-05 39.8 8.5 107 69-185 36-155 (432)
No 1
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=100.00 E-value=1e-68 Score=486.94 Aligned_cols=275 Identities=32% Similarity=0.627 Sum_probs=245.1
Q ss_pred CCCCceEeeeeceEEEEeeCCcccEEEEEecCCceEEEEcCeeeccCcchhhHHHHHHhhcccCCCCCCeEEEEeccccH
Q 037807 2 YLAGQAHFLEVEKIIFQGKSEYQNMMVFQSSSYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLLIGGGDGG 81 (299)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~s~~q~i~v~e~~~~g~~l~ldg~~q~~~~de~~Y~e~l~~~~l~~~~~~~~VL~IG~G~G~ 81 (299)
.+++.+++|+++++|++++|+||+|+|++++.+|++|+|||.+|++++||+.|||||+|+|++.|++|++||+||+|+|+
T Consensus 17 ~~~~~~~~~~v~~vl~~~~S~yQ~i~v~~s~~~G~~L~LDg~~q~te~De~~YhE~l~h~~l~~~p~pk~VLIiGgGdG~ 96 (294)
T 3o4f_A 17 LHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGA 96 (294)
T ss_dssp SSSSEEEEEEESEEEEEEC---CCEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSCCCEEEEESCTTSH
T ss_pred ccCCcceEEEEeeEEEeccCCCceEEEEEcCCcceEEEECCchhhccccHHHHHHHHHHHHHhhCCCCCeEEEECCCchH
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhh-cCCCCCCEEEEEccHHHHHHhcCCCCccEEEEcCCCCCCCCCCC
Q 037807 82 ILREISRHASVEQIHICEIDTMLINVYKEYFPEIA-IGYEDSRVILHVCDGSEYLKTVQSGTFDAIIIDAFDPIRPGHDL 160 (299)
Q Consensus 82 ~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~-~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l 160 (299)
+++++++|+++++|++||||++|+++|+++|+... +.+++||++++++|+++|+++. .++||+||+|+++|.+++..|
T Consensus 97 ~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~-~~~yDvIi~D~~dp~~~~~~L 175 (294)
T 3o4f_A 97 MLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQT-SQTFDVIISDCTDPIGPGESL 175 (294)
T ss_dssp HHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCS-SCCEEEEEESCCCCCCTTCCS
T ss_pred HHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhc-cccCCEEEEeCCCcCCCchhh
Confidence 99999999999999999999999999999998764 4578999999999999999876 789999999999999999999
Q ss_pred CcHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhhhcCCceeeeEEeecccCCcceeEEecccCCCCCCCCCC
Q 037807 161 FEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHRIFKGSASYAWTTVPTYPSGVIGFMLCSTESEGPSVDFI 240 (299)
Q Consensus 161 ~t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~~F~~~v~~~~~~vP~~~~g~w~~~~ask~~~~~~~~~~ 240 (299)
|+.+||+.|+++|+|||++++|++|++...+.++.+.++++++| +.+.+|.++||+||+|.|+|++||| +.++.
T Consensus 176 ~t~eFy~~~~~~L~p~Gv~v~q~~sp~~~~~~~~~~~~~l~~~F-~~v~~~~~~vPty~~g~w~f~~as~--~~~~~--- 249 (294)
T 3o4f_A 176 FTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYF-SDVGFYQAAIPTYYGGIMTFAWATD--NDALR--- 249 (294)
T ss_dssp SCCHHHHHHHHTEEEEEEEEEEEEESSSCCHHHHHHHHHHHHHC-SEEEEEEECCTTSSSSCEEEEEEES--CTTGG---
T ss_pred cCHHHHHHHHHHhCCCCEEEEecCCcccChHHHHHHHHHHHhhC-CceeeeeeeeccCCCcceeheeEEC--CCccc---
Confidence 99999999999999999999999999999999999999999999 6889999999999999999999998 32211
Q ss_pred CCCCCCCccccccCCCCCCeeeCHHHHHHHHhcccHHHHHhhccc
Q 037807 241 HPINPIDPDQIFGVAKGPLKFYNSAEVHAAAFCLPTFAKKPAHSH 285 (299)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~yy~~~~~h~~~f~lp~~~~~~l~~~ 285 (299)
++..+....+.. ....+|||||+ ++|+|||+||+|+|++|+.+
T Consensus 250 ~~~~~~~~~~~~-~~~~~~~yyn~-~~h~aaF~lP~~~~~~l~~e 292 (294)
T 3o4f_A 250 HLSTEIIQARFL-ASGLKCRYYNP-AIHTAAFALPQYLQDALASQ 292 (294)
T ss_dssp GCCHHHHHHHHH-SSCCCCSSCCH-HHHHHHTCCCHHHHHHTTSS
T ss_pred cCChHHHhHHHH-hhCCCceEECH-HHHHHHccCcHHHHHHHhcC
Confidence 111111111111 23457999999 99999999999999999764
No 2
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=100.00 E-value=2.1e-58 Score=422.52 Aligned_cols=276 Identities=32% Similarity=0.623 Sum_probs=228.3
Q ss_pred CCCCCceEeeeeceEEEEeeCCcccEEEEEecCCceEEEEcCeeeccCcchhhHHHHHHhhcccCCCCCCeEEEEecccc
Q 037807 1 MYLAGQAHFLEVEKIIFQGKSEYQNMMVFQSSSYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLLIGGGDG 80 (299)
Q Consensus 1 ~~~~~~~~~~~~~~~l~~~~s~~q~i~v~e~~~~g~~l~ldg~~q~~~~de~~Y~e~l~~~~l~~~~~~~~VL~IG~G~G 80 (299)
.+||+.+++++++++|++++|+||+|.|++++.+|++|++||.+|++++|++.|||||+|++++.++++++|||||||+|
T Consensus 16 ~~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~L~ldg~~~~~~~de~~Y~e~l~~~~l~~~~~~~~VLdiG~G~G 95 (294)
T 3adn_A 16 TLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDG 95 (294)
T ss_dssp CSCSSEEEEECCSCEEEEC----CCCEEECCTTTCCEEEETTEEEEETTTHHHHHHHHHHHHHHHSTTCCEEEEESCTTC
T ss_pred ccCCCceEEEEcccEEEEeECCCceEEEEEcCCcceEEEECCeEeeccCchhHHHHHHHHHHHhcCCCCCEEEEEeCChh
Confidence 37999999999999999999999999999999999999999999999999999999999999998999999999999999
Q ss_pred HHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhh-cCCCCCCEEEEEccHHHHHHhcCCCCccEEEEcCCCCCCCCCC
Q 037807 81 GILREISRHASVEQIHICEIDTMLINVYKEYFPEIA-IGYEDSRVILHVCDGSEYLKTVQSGTFDAIIIDAFDPIRPGHD 159 (299)
Q Consensus 81 ~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~-~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~ 159 (299)
+++++++++++..+|++||+|+.|++.|+++++..+ +.++++|++++++|++++++.. +++||+||+|+++|.+++..
T Consensus 96 ~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~-~~~fDvIi~D~~~p~~~~~~ 174 (294)
T 3adn_A 96 AMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQT-SQTFDVIISDCTDPIGPGES 174 (294)
T ss_dssp HHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CC-CCCEEEEEECC---------
T ss_pred HHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhc-CCCccEEEECCCCccCcchh
Confidence 999999999778899999999999999999998764 3366889999999999998764 68899999999999888889
Q ss_pred CCcHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhhhcCCceeeeEEeecccCCcceeEEecccCCCCCCCCC
Q 037807 160 LFEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHRIFKGSASYAWTTVPTYPSGVIGFMLCSTESEGPSVDF 239 (299)
Q Consensus 160 l~t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~~F~~~v~~~~~~vP~~~~g~w~~~~ask~~~~~~~~~ 239 (299)
|++.+||+.++++|+|||++++|+++++...+.++.+.++++++| +.+.++...+|+||+|.|+|++||| ...+.++
T Consensus 175 l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~F-~~v~~~~~~vp~~p~g~~~f~~as~--~~~~~~~ 251 (294)
T 3adn_A 175 LFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYF-SDVGFYQAAIPTYYGGIMTFAWATD--NDALRHL 251 (294)
T ss_dssp -CCHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHHC-SEEEEEEEECTTSSSSEEEEEEEES--CTTCSCC
T ss_pred ccHHHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHHHC-CCeEEEEEEecccCCCceEEEEEeC--CcccccC
Confidence 999999999999999999999999999988889999999999999 6788888999999999999999999 3222111
Q ss_pred CCCCCCCCccccccCCCCCCeeeCHHHHHHHHhcccHHHHHhhccc
Q 037807 240 IHPINPIDPDQIFGVAKGPLKFYNSAEVHAAAFCLPTFAKKPAHSH 285 (299)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~yy~~~~~h~~~f~lp~~~~~~l~~~ 285 (299)
|.+.+..+. . ....++||||+ ++|+|||+||+|++++|++.
T Consensus 252 --~~~~~~~~~-~-~~~~~~~yy~~-~~h~~~f~lp~~~~~~~~~~ 292 (294)
T 3adn_A 252 --STEIIQARF-L-ASGLKCRYYNP-AIHTAAFALPQYLQDALASQ 292 (294)
T ss_dssp --HHHHCCCCC-C-----CCSSCCH-HHHHHTTCCCHHHHHHCCCC
T ss_pred --CHHHHHHHH-h-ccCCCCeEECH-HHHHHHhcCcHHHHHHhhcc
Confidence 112232221 0 12237999999 99999999999999999654
No 3
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=100.00 E-value=2.8e-54 Score=393.14 Aligned_cols=271 Identities=45% Similarity=0.829 Sum_probs=243.9
Q ss_pred CCCCceEeeeeceEEEEeeCCcccEEEEEecCCceEEEEcCeeeccCcchhhHHHHHHhhcccCCCCCCeEEEEeccccH
Q 037807 2 YLAGQAHFLEVEKIIFQGKSEYQNMMVFQSSSYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLLIGGGDGG 81 (299)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~s~~q~i~v~e~~~~g~~l~ldg~~q~~~~de~~Y~e~l~~~~l~~~~~~~~VL~IG~G~G~ 81 (299)
.||+.+++++++++|++++|+||+|.|++++.+|++|++||.+|+++++++.||||++|++++.++++++||+||||+|.
T Consensus 12 ~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~l~ldg~~q~~~~~e~~Y~e~l~~~~l~~~~~~~~VLdiG~G~G~ 91 (283)
T 2i7c_A 12 MWPGQAFSLKIKKILYETKSKYQNVLVFESTTYGKVLVLDGVIQLTEKDEFAYHEMMTHVPMTVSKEPKNVLVVGGGDGG 91 (283)
T ss_dssp TSTTCCEEEEEEEEEEEEECSSSEEEEEEESSSCEEEEETTEEEEETTTHHHHHHHHHHHHHTTSSSCCEEEEEECTTSH
T ss_pred CCCCceEEEecccEEEEEECCCccEEEEEcCCCCEEEEECCEeeecccchhhHHHHHHHHHHhcCCCCCeEEEEeCCcCH
Confidence 57999999999999999999999999999999999999999999999999999999999999888899999999999999
Q ss_pred HHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEEEcCCCCCCCCCCCC
Q 037807 82 ILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAIIIDAFDPIRPGHDLF 161 (299)
Q Consensus 82 ~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~ 161 (299)
++++++++.+..+|++||+|+.+++.|+++++..+.++++++++++.+|+.+++... .++||+|++|.+++.++...++
T Consensus 92 ~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~-~~~fD~Ii~d~~~~~~~~~~l~ 170 (283)
T 2i7c_A 92 IIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV-TNTYDVIIVDSSDPIGPAETLF 170 (283)
T ss_dssp HHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC-CSCEEEEEEECCCTTTGGGGGS
T ss_pred HHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhC-CCCceEEEEcCCCCCCcchhhh
Confidence 999999987778999999999999999999986543345789999999999998765 6889999999999888778889
Q ss_pred cHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhhhcCCceeeeEEeecccCCcceeEEecccCCCCCCCCCCC
Q 037807 162 EGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHRIFKGSASYAWTTVPTYPSGVIGFMLCSTESEGPSVDFIH 241 (299)
Q Consensus 162 t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~~F~~~v~~~~~~vP~~~~g~w~~~~ask~~~~~~~~~~~ 241 (299)
+.+||+.++++|+|||++++++++++...+.+..+.+.++++| +.+.++...+|+|++|+|+|++||| + +.++.+
T Consensus 171 ~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F-~~v~~~~~~vP~y~~g~~g~~~~s~--~--~~~~~~ 245 (283)
T 2i7c_A 171 NQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLF-KKVEYANISIPTYPCGCIGILCCSK--T--DTGLTK 245 (283)
T ss_dssp SHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTC-SEEEEEEEECTTSGGGEEEEEEEES--S--TTCSSS
T ss_pred HHHHHHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHHHHHHC-CceEEEEEEcCCcCCCcEEEEEEeC--C--CccccC
Confidence 9999999999999999999999999988888999999999999 6788888999999999999999998 3 223456
Q ss_pred CCCCCCccccccCCCCCCeeeCHHHHHHHHhcccHHHHHhhcc
Q 037807 242 PINPIDPDQIFGVAKGPLKFYNSAEVHAAAFCLPTFAKKPAHS 284 (299)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~yy~~~~~h~~~f~lp~~~~~~l~~ 284 (299)
|.+++..++. ..+||||+ ++|+|||+||+|+++.|++
T Consensus 246 ~~~~~~~~~~-----~~~~~~~~-~~~~~~f~~p~~~~~~~~~ 282 (283)
T 2i7c_A 246 PNKKLESKEF-----ADLKYYNY-ENHSAAFKLPAFLLKEIEN 282 (283)
T ss_dssp CSSCCCSGGG-----TTCSSCCH-HHHHHTTCCCHHHHHHHTT
T ss_pred chhhhhhhhh-----hcCceECH-HHHHHHhcCcHHHHHHhhc
Confidence 7655554431 25699999 9999999999999999863
No 4
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=100.00 E-value=2.4e-54 Score=392.07 Aligned_cols=266 Identities=32% Similarity=0.629 Sum_probs=238.9
Q ss_pred CCCceEeeeeceEEEEeeCCcccEEEEEecCCceEEEEcCeeeccCcchhhHHHHHHhhcccCCCCCCeEEEEeccccHH
Q 037807 3 LAGQAHFLEVEKIIFQGKSEYQNMMVFQSSSYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLLIGGGDGGI 82 (299)
Q Consensus 3 ~~~~~~~~~~~~~l~~~~s~~q~i~v~e~~~~g~~l~ldg~~q~~~~de~~Y~e~l~~~~l~~~~~~~~VL~IG~G~G~~ 82 (299)
+|+.+++++++++|++++|+||+|.|++++.+|++|++||..|++++|++.|||+|+|++++.++++++||+||||+|.+
T Consensus 10 ~~~~~~~~~~~~~l~~~~s~~~~i~v~~~~~~g~~L~ldg~~q~~~~de~~y~e~l~~~~l~~~~~~~~VLdiG~G~G~~ 89 (275)
T 1iy9_A 10 TKNFGITMKVNKTLHTEQTEFQHLEMVETEEFGNMLFLDGMVMTSEKDEFVYHEMVAHVPLFTHPNPEHVLVVGGGDGGV 89 (275)
T ss_dssp ETTEEEEEEEEEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSSCCEEEEESCTTCHH
T ss_pred CCCcEEEEeeeeEEEEEECCCceEEEEEcCCCCEEEEECCEEeecccchhHHHHHHHHHHHhhCCCCCEEEEECCchHHH
Confidence 38899999999999999999999999999999999999999999999999999999999988888999999999999999
Q ss_pred HHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEEEcCCCCCCCCCCCCc
Q 037807 83 LREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAIIIDAFDPIRPGHDLFE 162 (299)
Q Consensus 83 ~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~t 162 (299)
+++++++++..+|++||+|+.+++.|+++++..+..++++|++++.+|+++++... +++||+|++|++++.+++..|++
T Consensus 90 ~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~fD~Ii~d~~~~~~~~~~l~~ 168 (275)
T 1iy9_A 90 IREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKS-ENQYDVIMVDSTEPVGPAVNLFT 168 (275)
T ss_dssp HHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTC-CSCEEEEEESCSSCCSCCCCCST
T ss_pred HHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC-CCCeeEEEECCCCCCCcchhhhH
Confidence 99999987778999999999999999999976544456789999999999999865 67899999999998888888999
Q ss_pred HHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhhhcCCceeeeEEeecccCCcceeEEecccCCCCCCCCCCCC
Q 037807 163 GPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHRIFKGSASYAWTTVPTYPSGVIGFMLCSTESEGPSVDFIHP 242 (299)
Q Consensus 163 ~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~~F~~~v~~~~~~vP~~~~g~w~~~~ask~~~~~~~~~~~~ 242 (299)
.+||+.++++|+|||+++++.++++...+.++.+.++++++| +.+..+...+|+||+|.|+|++||| + .+|
T Consensus 169 ~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F-~~v~~~~~~vp~~~~g~w~~~~ask--~------~~~ 239 (275)
T 1iy9_A 169 KGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEIF-PITKLYTANIPTYPSGLWTFTIGSK--K------YDP 239 (275)
T ss_dssp THHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTC-SEEEEEEECCTTSGGGCEEEEEEES--S------CCT
T ss_pred HHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHhC-CCeEEEEEecCcccCcceEEEEeeC--C------CCc
Confidence 999999999999999999999999888889999999999999 5788888999999999999999998 3 234
Q ss_pred CCCCCccccccCCCCCCeeeCHHHHHHHHhcccHHHHHhhc
Q 037807 243 INPIDPDQIFGVAKGPLKFYNSAEVHAAAFCLPTFAKKPAH 283 (299)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~yy~~~~~h~~~f~lp~~~~~~l~ 283 (299)
. +++.+. ....++||||+ ++|+|||+||+|++++|+
T Consensus 240 ~-~~~~~~---~~~~~~~~~~~-~~~~~~f~lp~~~~~~~~ 275 (275)
T 1iy9_A 240 L-AVEDSR---FFDIETKYYTK-DIHKAAFVLPKFVSDLIK 275 (275)
T ss_dssp T-CCCGGG---CCCCCCSSCCH-HHHHHTTCCCHHHHTTC-
T ss_pred c-ccchhh---ccccCCeEeCH-HHHHHHcCCCHHHHHhhC
Confidence 3 233221 22357899999 999999999999999873
No 5
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=100.00 E-value=3.4e-53 Score=394.24 Aligned_cols=278 Identities=65% Similarity=1.203 Sum_probs=245.2
Q ss_pred CCCCceEeeeeceEEEEeeCCcccEEEEEecCCceEEEEcCeeeccCcchhhHHHHHHhhcccCCCCCCeEEEEeccccH
Q 037807 2 YLAGQAHFLEVEKIIFQGKSEYQNMMVFQSSSYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLLIGGGDGG 81 (299)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~s~~q~i~v~e~~~~g~~l~ldg~~q~~~~de~~Y~e~l~~~~l~~~~~~~~VL~IG~G~G~ 81 (299)
+||+.+++++++++|++++|+||+|.|++++.+|+.|++||.+|+++++++.||||++|++++.++++++||+||||+|.
T Consensus 54 ~~~~~~~~~~v~~vl~~~~s~~q~I~v~~~~~~g~~l~ldg~~~~~~~de~~y~e~L~~l~l~~~~~~~~VLdIG~G~G~ 133 (334)
T 1xj5_A 54 MWPGEAHSLKVEKVLFQGKSDYQDVIVFQSATYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGG 133 (334)
T ss_dssp TSTTEEEEEEEEEEEEEEECSSCEEEEEEESSSCEEEEETTEEEEETTTHHHHHHHHHHHHHTTSSCCCEEEEETCSSSH
T ss_pred CCCCceEEEEeeeEEEEeecCCeEEEEEEcCCCCeEEEECCEeecCcCcchHHHHHHHHHHHhhCCCCCEEEEECCCccH
Confidence 48999999999999999999999999999999999999999999999999999999999999888889999999999999
Q ss_pred HHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEEEcCCCCCCCCCCCC
Q 037807 82 ILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAIIIDAFDPIRPGHDLF 161 (299)
Q Consensus 82 ~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~ 161 (299)
++++++++.+..+|++||+|+.+++.|+++++..+.++++++++++.+|+.+++...++++||+|++|+++|.++...++
T Consensus 134 ~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi~d~~~p~~~~~~l~ 213 (334)
T 1xj5_A 134 VLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVDSSDPIGPAKELF 213 (334)
T ss_dssp HHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEEECCCCTTSGGGGGG
T ss_pred HHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEEECCCCccCcchhhh
Confidence 99999998777899999999999999999997643334578999999999999875435789999999998877666688
Q ss_pred cHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhhhcCCceeeeEEeecccCCcceeEEecccCCCCCCCCCCC
Q 037807 162 EGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHRIFKGSASYAWTTVPTYPSGVIGFMLCSTESEGPSVDFIH 241 (299)
Q Consensus 162 t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~~F~~~v~~~~~~vP~~~~g~w~~~~ask~~~~~~~~~~~ 241 (299)
+.+||+.++++|+|||+|+++++++|.....+..+.+.++++|+..+.++.+.+|+|++|.|||++||| +.++.++.+
T Consensus 214 ~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~~~~~~~~vP~y~~g~~gf~~as~--~~~~~~~~~ 291 (334)
T 1xj5_A 214 EKPFFQSVARALRPGGVVCTQAESLWLHMDIIEDIVSNCREIFKGSVNYAWTSVPTYPSGVIGFMLCST--EGPDVDFKH 291 (334)
T ss_dssp SHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHCSSCEEEEEEECTTSGGGEEEEEEEEC--SSSCCCSSS
T ss_pred HHHHHHHHHHhcCCCcEEEEecCCccccHHHHHHHHHHHHHhCccccceEEEeCCcccCCceEEEEccc--CCccccccC
Confidence 899999999999999999999999999888888999999999964677777899999999999999998 434445567
Q ss_pred CCCCCCccccccCCCCCCeeeCHHHHHHHHhcccHHHHHhhcc
Q 037807 242 PINPIDPDQIFGVAKGPLKFYNSAEVHAAAFCLPTFAKKPAHS 284 (299)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~yy~~~~~h~~~f~lp~~~~~~l~~ 284 (299)
|.+.++.++. ....+|||||+ ++|+|||+||+|+++.|++
T Consensus 292 ~~~~~~~~~~--~~~~~~~yy~~-~~h~~~f~lp~~~~~~l~~ 331 (334)
T 1xj5_A 292 PLNPIDESSS--KSNGPLKFYNA-EIHSAAFCLPSFAKKVIES 331 (334)
T ss_dssp CSSCCCSGGG--TTTCCCSSCCH-HHHHHTTCCCHHHHHHHC-
T ss_pred chhhhhhhhh--cccCCceEECH-HHHHHHhcCcHHHHHHHhc
Confidence 7766654432 23457999999 9999999999999999975
No 6
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=100.00 E-value=1.4e-53 Score=392.38 Aligned_cols=274 Identities=48% Similarity=0.918 Sum_probs=233.4
Q ss_pred CCCCceEeeeeceEEEEeeCCcccEEEEEecCCceEEEEcCeeeccCcchhhHHHHHHhhcccCCCCCCeEEEEeccccH
Q 037807 2 YLAGQAHFLEVEKIIFQGKSEYQNMMVFQSSSYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLLIGGGDGG 81 (299)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~s~~q~i~v~e~~~~g~~l~ldg~~q~~~~de~~Y~e~l~~~~l~~~~~~~~VL~IG~G~G~ 81 (299)
+||+.+++++++++|++++|+||+|.|++++.+|++|++||.+|+++++++.||+|++|++++.++++++||+||||+|.
T Consensus 29 ~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~L~ldg~~~~~~~de~~y~e~l~~~~l~~~~~~~~VLdiG~G~G~ 108 (304)
T 2o07_A 29 LWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERDEFSYQEMIANLPLCSHPNPRKVLIIGGGDGG 108 (304)
T ss_dssp TSTTEEEEEEEEEEEEEEECSSSEEEEEEESSSCEEEEETTEEEEETTTHHHHHHHHHHHHHTTSSSCCEEEEEECTTSH
T ss_pred CCCCceEEEEeccEEEEEECCCcEEEEEEcCCCceEEEECCEEEeecccchHHHHHHHHHHHhhCCCCCEEEEECCCchH
Confidence 58999999999999999999999999999999999999999999999999999999999998888899999999999999
Q ss_pred HHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEEEcCCCCCCCCCCCC
Q 037807 82 ILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAIIIDAFDPIRPGHDLF 161 (299)
Q Consensus 82 ~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~ 161 (299)
++++++++.+..+|++||+|+.+++.|+++++....++++++++++.+|+.+++... +++||+|++|++++.+++..++
T Consensus 109 ~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~-~~~fD~Ii~d~~~~~~~~~~l~ 187 (304)
T 2o07_A 109 VLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQN-QDAFDVIITDSSDPMGPAESLF 187 (304)
T ss_dssp HHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTC-SSCEEEEEEECC----------
T ss_pred HHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhC-CCCceEEEECCCCCCCcchhhh
Confidence 999999987678999999999999999999986433345789999999999998764 6789999999999887777788
Q ss_pred cHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhhhcCCceeeeEEeecccCCcceeEEecccCCCCCCCCCCC
Q 037807 162 EGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHRIFKGSASYAWTTVPTYPSGVIGFMLCSTESEGPSVDFIH 241 (299)
Q Consensus 162 t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~~F~~~v~~~~~~vP~~~~g~w~~~~ask~~~~~~~~~~~ 241 (299)
+.+||+.++++|+|||+++++.+++|...+..+.+.+.++++| +.+.++...+|+|++|.|+|++||| . +..++.+
T Consensus 188 ~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~f-~~v~~~~~~vP~~~~g~~g~~~as~--~-~~~~~~~ 263 (304)
T 2o07_A 188 KESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLF-PVVAYAYCTIPTYPSGQIGFMLCSK--N-PSTNFQE 263 (304)
T ss_dssp -CHHHHHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHHHHHC-SEEEEEEEECTTSGGGEEEEEEEES--S-TTCCSSS
T ss_pred HHHHHHHHHhccCCCeEEEEecCCcccchHHHHHHHHHHHHhC-CCceeEEEEeccccCcceEEEEEeC--C-ccccccc
Confidence 8999999999999999999999889988888899999999999 5788888899999999999999998 3 3333445
Q ss_pred CCCCCCccccccCCCCCCeeeCHHHHHHHHhcccHHHHHhhcc
Q 037807 242 PINPIDPDQIFGVAKGPLKFYNSAEVHAAAFCLPTFAKKPAHS 284 (299)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~yy~~~~~h~~~f~lp~~~~~~l~~ 284 (299)
|.+++..+.. ...+|||||+ ++|+|+|+||+|+++.|++
T Consensus 264 ~~~~~~~~~~---~~~~~~~y~~-~~h~~~f~lp~~~~~~~~~ 302 (304)
T 2o07_A 264 PVQPLTQQQV---AQMQLKYYNS-DVHRAAFVLPEFARKALND 302 (304)
T ss_dssp CSSCCCHHHH---HHTTCSSCCH-HHHHHTTCCCHHHHHHHHC
T ss_pred chhhhhHhhh---cccCCeEECH-HHHHHHhcCcHHHHHHhhc
Confidence 6544443221 1247899999 9999999999999999974
No 7
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=100.00 E-value=1.3e-53 Score=394.11 Aligned_cols=273 Identities=44% Similarity=0.833 Sum_probs=231.1
Q ss_pred CCCCceEeeeeceEEEEeeCCcccEEEEEecCCceEEEEcCeeeccCcchhhHHHHHHhhcccCCCCCCeEEEEeccccH
Q 037807 2 YLAGQAHFLEVEKIIFQGKSEYQNMMVFQSSSYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLLIGGGDGG 81 (299)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~s~~q~i~v~e~~~~g~~l~ldg~~q~~~~de~~Y~e~l~~~~l~~~~~~~~VL~IG~G~G~ 81 (299)
+||+.+++++++++|++++|+||+|.|++++.+|+.|++||.+|+++++++.||||++|++++.++++++||+||||+|.
T Consensus 42 ~~~~~~~~~~~~~vl~~~~s~~q~i~v~~~~~~g~~l~ldg~~q~~~~de~~Y~e~l~~l~l~~~~~~~~VLdIG~G~G~ 121 (314)
T 2b2c_A 42 AWPGQAFSLQVKKVLFHEKSKYQDVLVFESTTYGNVLVLDGIVQATERDEFSYQEMLAHLPMFAHPDPKRVLIIGGGDGG 121 (314)
T ss_dssp CCTTEEEEEEEEEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEESSSSSHHHHHHHHHHHHHSSSCCEEEEESCTTSH
T ss_pred cCCCceEEeecccEEEEEECCCCCEEEEEcCCCCEEEEECCEeecCCcchhHHHHHHHHHHHhhCCCCCEEEEEcCCcCH
Confidence 58999999999999999999999999999999999999999999999999999999999998888889999999999999
Q ss_pred HHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEEEcCCCCCCCCCCCC
Q 037807 82 ILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAIIIDAFDPIRPGHDLF 161 (299)
Q Consensus 82 ~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~ 161 (299)
++++++++.+..+|++||+|+.+++.|+++++..+.++++++++++.+|+.+++... +++||+|++|++++.+++..++
T Consensus 122 ~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~-~~~fD~Ii~d~~~~~~~~~~l~ 200 (314)
T 2b2c_A 122 ILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNH-KNEFDVIITDSSDPVGPAESLF 200 (314)
T ss_dssp HHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHC-TTCEEEEEECCC----------
T ss_pred HHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhc-CCCceEEEEcCCCCCCcchhhh
Confidence 999999987778999999999999999999976432344789999999999998764 6889999999998887777889
Q ss_pred cHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhhhcCCceeeeEEeecccCCcceeEEecccCCCCCCCCCCC
Q 037807 162 EGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHRIFKGSASYAWTTVPTYPSGVIGFMLCSTESEGPSVDFIH 241 (299)
Q Consensus 162 t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~~F~~~v~~~~~~vP~~~~g~w~~~~ask~~~~~~~~~~~ 241 (299)
+.+||+.++++|+|||+++++.+++|...+.++.+.+.++++| +.+.++...+|+|++|+|||++||| + +..++.+
T Consensus 201 t~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~vF-~~v~~~~~~iP~~~~g~~g~~~ask--~-~~~~~~~ 276 (314)
T 2b2c_A 201 GQSYYELLRDALKEDGILSSQGESVWLHLPLIAHLVAFNRKIF-PAVTYAQSIVSTYPSGSMGYLICAK--N-ANRDVTT 276 (314)
T ss_dssp ---HHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHC-SEEEEEEEECTTSGGGEEEEEEEES--S-TTCCTTS
T ss_pred HHHHHHHHHhhcCCCeEEEEECCCcccCHHHHHHHHHHHHHHC-CcceEEEEEecCcCCCceEEEEEeC--C-CcccccC
Confidence 9999999999999999999999999988888999999999999 5788888999999999999999998 3 2223446
Q ss_pred CCCCCCccccccCCCCCCeeeCHHHHHHHHhcccHHHHHhhc
Q 037807 242 PINPIDPDQIFGVAKGPLKFYNSAEVHAAAFCLPTFAKKPAH 283 (299)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~yy~~~~~h~~~f~lp~~~~~~l~ 283 (299)
|.+++..++.. ..+|||||+ ++|+|||+||+|++++|+
T Consensus 277 ~~~~~~~~~~~---~~~~~yy~~-~~h~~~f~lp~~~~~~l~ 314 (314)
T 2b2c_A 277 PARTLTAEQIK---ALNLRFYNS-EVHKAAFVLPQFVKNALE 314 (314)
T ss_dssp CSSCCCHHHHH---HTTCSSCCH-HHHHHTTCCCHHHHHTCC
T ss_pred chhhhhHHhhc---ccCCeEECH-HHHHHHccCcHHHHHhhC
Confidence 66555444321 127899999 999999999999999873
No 8
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=100.00 E-value=4.7e-52 Score=380.80 Aligned_cols=270 Identities=36% Similarity=0.675 Sum_probs=232.2
Q ss_pred CCCceEeeeeceEEEEeeCCcccEEEEEecCCceEEEEcCeeeccCcchhhHHHHHHhhcccCCCCCCeEEEEeccccHH
Q 037807 3 LAGQAHFLEVEKIIFQGKSEYQNMMVFQSSSYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLLIGGGDGGI 82 (299)
Q Consensus 3 ~~~~~~~~~~~~~l~~~~s~~q~i~v~e~~~~g~~l~ldg~~q~~~~de~~Y~e~l~~~~l~~~~~~~~VL~IG~G~G~~ 82 (299)
||+.+++++++++|++++|+||+|.|++++.+|+.|++||.+|+++++++.|||+++|++++.++++++|||||||+|.+
T Consensus 25 ~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~l~ldg~~~~~~~de~~y~e~l~~~~l~~~~~~~~VLdiG~G~G~~ 104 (296)
T 1inl_A 25 GNNVGLFMKMNRVIYSGQSDIQRIDIFENPDLGVVFALDGITMTTEKDEFMYHEMLAHVPMFLHPNPKKVLIIGGGDGGT 104 (296)
T ss_dssp TSSEEEEEECSEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSSCCEEEEEECTTCHH
T ss_pred CCCceEEeecccEEEEEECCCccEEEEEcCCCcEEEEECCEEeecccchhHHHHHHhHHHHhcCCCCCEEEEEcCCcCHH
Confidence 79999999999999999999999999999999999999999999999999999999999988888899999999999999
Q ss_pred HHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEEEcCCCC-CCCCCCCC
Q 037807 83 LREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAIIIDAFDP-IRPGHDLF 161 (299)
Q Consensus 83 ~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi~D~~~~-~~~~~~l~ 161 (299)
+++++++.+..+|++||+|+.+++.|+++++..+..+++++++++.+|+.+++... +++||+|++|++++ .++...++
T Consensus 105 ~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~-~~~fD~Ii~d~~~~~~~~~~~l~ 183 (296)
T 1inl_A 105 LREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKF-KNEFDVIIIDSTDPTAGQGGHLF 183 (296)
T ss_dssp HHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGC-SSCEEEEEEEC----------CC
T ss_pred HHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC-CCCceEEEEcCCCcccCchhhhh
Confidence 99999986678999999999999999999876433345789999999999998764 67899999999988 67777889
Q ss_pred cHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhhhcCCceeeeEEeecccCCcceeEEecccCCCCCCCCCCC
Q 037807 162 EGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHRIFKGSASYAWTTVPTYPSGVIGFMLCSTESEGPSVDFIH 241 (299)
Q Consensus 162 t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~~F~~~v~~~~~~vP~~~~g~w~~~~ask~~~~~~~~~~~ 241 (299)
+.+|++.++++|+|||++++++++++...+.++.+.++++++| +.+..+...+|+||+|.|+|++||| + .+
T Consensus 184 ~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F-~~v~~~~~~vp~~p~g~~~f~~as~--~------~~ 254 (296)
T 1inl_A 184 TEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKVF-PITRVYLGFMTTYPSGMWSYTFASK--G------ID 254 (296)
T ss_dssp SHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHHC-SEEEEEEEECTTSTTSEEEEEEEES--S------CC
T ss_pred HHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHHC-CceEEEEeecCccCCCceEEEEecC--C------CC
Confidence 9999999999999999999999999888888999999999999 5788888899999999999999999 3 24
Q ss_pred CCCCCCccccccCCCCCCeeeCHHHHHHHHhcccHHHHHhhcc
Q 037807 242 PINPIDPDQIFGVAKGPLKFYNSAEVHAAAFCLPTFAKKPAHS 284 (299)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~yy~~~~~h~~~f~lp~~~~~~l~~ 284 (299)
|.++++.++.. ....++||||+ ++|+|+|+||+|+++.|+.
T Consensus 255 ~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~f~~p~~~~~~~~~ 295 (296)
T 1inl_A 255 PIKDFDPEKVR-KFNKELKYYNE-EVHVASFALPNFVKKELGL 295 (296)
T ss_dssp TTTTCCHHHHH-TCSSCCSSCCH-HHHHHTTCCCHHHHHHTTC
T ss_pred hhhhhhhhhHh-hccCCceecCH-HHHHHHcCCcHHHHHHHhh
Confidence 55445332211 12347899999 9999999999999999864
No 9
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=100.00 E-value=6.7e-52 Score=383.83 Aligned_cols=270 Identities=45% Similarity=0.809 Sum_probs=238.1
Q ss_pred CCCCceEeeeeceEEEEeeCCcccEEEEEecCCceEEEEcCeeeccCcchhhHHHHHHhhcccCCCCCCeEEEEeccccH
Q 037807 2 YLAGQAHFLEVEKIIFQGKSEYQNMMVFQSSSYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLLIGGGDGG 81 (299)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~s~~q~i~v~e~~~~g~~l~ldg~~q~~~~de~~Y~e~l~~~~l~~~~~~~~VL~IG~G~G~ 81 (299)
+||+.+++++++++|++++|+||+|.|++++.+|+.|++||.+|+++++++.|||+++|++++.++++++|||||||+|.
T Consensus 50 ~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~l~ldg~~~~~~~de~~y~e~l~~~~l~~~~~~~~VLdiG~G~G~ 129 (321)
T 2pt6_A 50 MWPGQAFSLKIKKILYETKSKYQNVLVFESTTYGKVLVLDGVIQLTEKDEFAYHEMMTHVPMTVSKEPKNVLVVGGGDGG 129 (321)
T ss_dssp TSTTCCEEEEEEEEEEEEECSSCEEEEEEESSSCEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSSCCEEEEEECTTCH
T ss_pred CCCCceEEEecccEEEEEECCCceEEEEEcCCCcEEEEECCEeeeCcccchHHHHHHHHHHHhcCCCCCEEEEEcCCccH
Confidence 48999999999999999999999999999999999999999999999999999999999998888889999999999999
Q ss_pred HHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEEEcCCCCCCCCCCCC
Q 037807 82 ILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAIIIDAFDPIRPGHDLF 161 (299)
Q Consensus 82 ~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~ 161 (299)
++++++++++..+|++||+|+.+++.|+++++....++++++++++.+|+.+++... +++||+|++|.++|.++...++
T Consensus 130 ~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~-~~~fDvIi~d~~~p~~~~~~l~ 208 (321)
T 2pt6_A 130 IIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV-TNTYDVIIVDSSDPIGPAETLF 208 (321)
T ss_dssp HHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC-CSCEEEEEEECCCSSSGGGGGS
T ss_pred HHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhc-CCCceEEEECCcCCCCcchhhh
Confidence 999999987678999999999999999999876422345689999999999998764 6789999999988877777788
Q ss_pred cHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhhhcCCceeeeEEeecccCCcceeEEecccCCCCCCCCCCC
Q 037807 162 EGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHRIFKGSASYAWTTVPTYPSGVIGFMLCSTESEGPSVDFIH 241 (299)
Q Consensus 162 t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~~F~~~v~~~~~~vP~~~~g~w~~~~ask~~~~~~~~~~~ 241 (299)
+.+|++.++++|+|||+++++.++++...+.++.+.+.++++| +.+.++...+|+|++|+|+|++||| .. +
T Consensus 209 ~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F-~~v~~~~~~vp~~~~g~w~f~~as~--~~------~ 279 (321)
T 2pt6_A 209 NQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLF-KKVEYANISIPTYPCGCIGILCCSK--TD------T 279 (321)
T ss_dssp SHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTTC-SEEEEEEEECTTSGGGEEEEEEEES--ST------T
T ss_pred HHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHC-CCeEEEEEEeccccCceEEEEEeeC--CC------C
Confidence 8999999999999999999999888888889999999999999 5788888899999999999999998 32 3
Q ss_pred CCCCCCccccccCCC-CCCeeeCHHHHHHHHhcccHHHHHhhcc
Q 037807 242 PINPIDPDQIFGVAK-GPLKFYNSAEVHAAAFCLPTFAKKPAHS 284 (299)
Q Consensus 242 ~~~~~~~~~~~~~~~-~~~~yy~~~~~h~~~f~lp~~~~~~l~~ 284 (299)
|. ++..++.. ... .++||||+ ++|+|+|+||+|+++.|++
T Consensus 280 p~-~~~~~~~~-~~~~~~~~~y~~-~~h~~~f~lp~~~~~~~~~ 320 (321)
T 2pt6_A 280 GL-TKPNKKLE-SKEFADLKYYNY-ENHSAAFKLPAFLLKEIEN 320 (321)
T ss_dssp CS-SSCSSCCC-SGGGTTCSSCCH-HHHHHTTCCCHHHHHHTSC
T ss_pred cc-chhHHHHH-hccCCCCeEECH-HHHHHHhCCcHHHHHHHhh
Confidence 43 22222211 111 37899999 9999999999999999864
No 10
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=100.00 E-value=2.3e-51 Score=377.48 Aligned_cols=273 Identities=38% Similarity=0.756 Sum_probs=232.5
Q ss_pred CCCCceEeeeeceEEEEeeCCcccEEEEEec---CCceEEEEcCeeeccCcchhhHHHHHHhhcccCCCCCCeEEEEecc
Q 037807 2 YLAGQAHFLEVEKIIFQGKSEYQNMMVFQSS---SYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLLIGGG 78 (299)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~s~~q~i~v~e~~---~~g~~l~ldg~~q~~~~de~~Y~e~l~~~~l~~~~~~~~VL~IG~G 78 (299)
+||+.+++++++++|++.+|+||+|.|++++ .+|++|++||.+|+++.+++.|+++++++++..++++++|||||||
T Consensus 26 ~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~p~g~~g~~l~ldg~~~~~~~de~~y~e~l~~~~l~~~~~~~~VLdiG~G 105 (304)
T 3bwc_A 26 QWPGQAMSLRVEKVLYDAPTKFQHLTIFESDPKGPWGTVMALDGCIQVTDYDEFVYHEVLGHTSLCSHPKPERVLIIGGG 105 (304)
T ss_dssp SSCSEEEEEEEEEEEEEEECSSSEEEEEEECTTSSCCEEEEETTEEEEETTTHHHHHHHHHHHHHTTSSSCCEEEEEECT
T ss_pred CCCCceEEEecccEEEEeECCCCCEEEEEecCCCccceEEEECCeeeeecccchHHHHHHhhhhhhcCCCCCeEEEEcCC
Confidence 4899999999999999999999999999999 8899999999999999999999999999999888889999999999
Q ss_pred ccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEEEcCCCCCCCCC
Q 037807 79 DGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAIIIDAFDPIRPGH 158 (299)
Q Consensus 79 ~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~ 158 (299)
+|.++++++++++..+|++||+|+.+++.|+++++.....+.+++++++.+|+.+++....+++||+|++|.+++.++..
T Consensus 106 ~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi~d~~~~~~~~~ 185 (304)
T 3bwc_A 106 DGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVVIIDTTDPAGPAS 185 (304)
T ss_dssp TSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEEEEECC-------
T ss_pred CCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEEEECCCCccccch
Confidence 99999999998777899999999999999999987543334578999999999999875226789999999999888888
Q ss_pred CCCcHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhhh-cCCceeeeEEeecccCCcceeEEecccCCCCCCC
Q 037807 159 DLFEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHRI-FKGSASYAWTTVPTYPSGVIGFMLCSTESEGPSV 237 (299)
Q Consensus 159 ~l~t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~~-F~~~v~~~~~~vP~~~~g~w~~~~ask~~~~~~~ 237 (299)
.|++.+||+.++++|+|||+++++.++++......+.+.+.+++. | ..+..+...+|+||+|.|+|++||| + +..
T Consensus 186 ~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF-~~v~~~~~~vP~yp~g~w~f~~as~--~-~~~ 261 (304)
T 3bwc_A 186 KLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGF-ASVQYALMHVPTYPCGSIGTLVCSK--K-AGV 261 (304)
T ss_dssp --CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTC-SEEEEEECCCTTSTTSCCEEEEEES--S-SSC
T ss_pred hhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCC-CcEEEEEeecccccCcceEEEEEeC--C-ccc
Confidence 899999999999999999999999988888888889999999999 9 5677888889999999999999999 3 222
Q ss_pred CCCCCCCCCCccccccCCCCCCeeeCHHHHHHHHhcccHHHHHhhc
Q 037807 238 DFIHPINPIDPDQIFGVAKGPLKFYNSAEVHAAAFCLPTFAKKPAH 283 (299)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~yy~~~~~h~~~f~lp~~~~~~l~ 283 (299)
...+|.+++..++. ..+|||||+ ++|+|+|+||+|++++|+
T Consensus 262 ~~~~~~~~~~~~~~----~~~~~~y~~-~~~~~~f~~p~~~~~~~~ 302 (304)
T 3bwc_A 262 DVTKPLRPVEDMPF----AKDLKYYDS-EMHKASFALPRFARHINN 302 (304)
T ss_dssp CTTSCSSCGGGSGG----GGGCSSCCH-HHHHHHTCCCGGGGGGTC
T ss_pred cccChhhhhhhhhh----ccCCeEECH-HHHHHHcCCCHHHHHHhc
Confidence 23456543422221 237999999 999999999999999986
No 11
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=100.00 E-value=4.4e-50 Score=365.05 Aligned_cols=264 Identities=30% Similarity=0.543 Sum_probs=229.2
Q ss_pred CCCceEeeeeceEEEEeeCCcccEEEEEecCCceEEEEcCeeeccCcchhhHHHHHHhhcccCCCCCCeEEEEeccccHH
Q 037807 3 LAGQAHFLEVEKIIFQGKSEYQNMMVFQSSSYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLLIGGGDGGI 82 (299)
Q Consensus 3 ~~~~~~~~~~~~~l~~~~s~~q~i~v~e~~~~g~~l~ldg~~q~~~~de~~Y~e~l~~~~l~~~~~~~~VL~IG~G~G~~ 82 (299)
+|+.+++++++++|++++|+||+|.|++++.+|+.|++||..|+++++++.|||+|+|++++.++++++||+||||+|.+
T Consensus 10 ~~~~~~~~~~~~~l~~~~s~~~~i~v~~~~~~g~~L~ldg~~q~~~~d~~~y~e~l~~~~l~~~~~~~~VLdiG~G~G~~ 89 (281)
T 1mjf_A 10 PRGYGVAFKIKKKIYEKLSKYQKIEVYETEGFGRLLALDGTVQLVTLGERSYHEPLVHPAMLAHPKPKRVLVIGGGDGGT 89 (281)
T ss_dssp GGGEEEEECEEEEEEEEECSSCEEEEEEESSSCEEEEETTEEEEETTTTHHHHHHHHHHHHHHSSCCCEEEEEECTTSHH
T ss_pred CCCceEEEeeccEEEEeeCCCccEEEEECCCccEEEEECCEeeeccccchHHHHHHHHHHHhhCCCCCeEEEEcCCcCHH
Confidence 38899999999999999999999999999999999999999999999999999999998888788899999999999999
Q ss_pred HHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCC-------CCCCEEEEEccHHHHHHhcCCCCccEEEEcCCCCCC
Q 037807 83 LREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGY-------EDSRVILHVCDGSEYLKTVQSGTFDAIIIDAFDPIR 155 (299)
Q Consensus 83 ~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~-------~~~rv~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~ 155 (299)
+++++++ +..+|++||+|+.+++.|++++ ....++ ++++++++.+|+.+++.. +++||+|++|.+++.+
T Consensus 90 ~~~l~~~-~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~--~~~fD~Ii~d~~~~~~ 165 (281)
T 1mjf_A 90 VREVLQH-DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN--NRGFDVIIADSTDPVG 165 (281)
T ss_dssp HHHHTTS-CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH--CCCEEEEEEECCCCC-
T ss_pred HHHHHhC-CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc--cCCeeEEEECCCCCCC
Confidence 9999999 6789999999999999999998 432233 468999999999999875 5789999999999887
Q ss_pred CCCCCCcHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhhhcCCceeeeEEeecccCCcceeEEecccCCCCC
Q 037807 156 PGHDLFEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHRIFKGSASYAWTTVPTYPSGVIGFMLCSTESEGP 235 (299)
Q Consensus 156 ~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~~F~~~v~~~~~~vP~~~~g~w~~~~ask~~~~~ 235 (299)
++..+++.+||+.++++|+|||+++++.++++...+.++.+.+.++++| +.+.++...+|+| +|.|+|++||| . +
T Consensus 166 ~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~f-~~v~~~~~~vP~~-~g~~~~~~as~--~-~ 240 (281)
T 1mjf_A 166 PAKVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKVF-DRVYYYSFPVIGY-ASPWAFLVGVK--G-D 240 (281)
T ss_dssp ----TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHHC-SEEEEEEECCTTS-SSSEEEEEEEE--S-S
T ss_pred cchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHC-CceEEEEEecCCC-CceEEEEEeeC--C-C
Confidence 7778889999999999999999999999888888888999999999999 5788888899999 78999999999 3 1
Q ss_pred CCCCCCCCCCCCccccccCCCCCCeeeCHHHHHHHHhcccHHHHHhhcc
Q 037807 236 SVDFIHPINPIDPDQIFGVAKGPLKFYNSAEVHAAAFCLPTFAKKPAHS 284 (299)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~yy~~~~~h~~~f~lp~~~~~~l~~ 284 (299)
.+|. +++.++. ...++||||+ ++|+|||+||+|+++.|+.
T Consensus 241 ----~~~~-~~~~~~~---~~~~~~~~~~-~~~~~~f~~p~~~~~~~~~ 280 (281)
T 1mjf_A 241 ----IDFT-KIDRERA---KKLQLEYYDP-LMHETLFQMPKYIRETLQR 280 (281)
T ss_dssp ----CCTT-CCCHHHH---HTSCCSSCCG-GGGGGGGCCCHHHHHHHC-
T ss_pred ----CCcc-ccchhhh---hccCCcEECH-HHHHHHhcCcHHHHHHHhh
Confidence 2454 3443321 1147899999 9999999999999999864
No 12
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=100.00 E-value=1e-50 Score=365.76 Aligned_cols=254 Identities=17% Similarity=0.261 Sum_probs=223.8
Q ss_pred CCCceEeeeeceEEEEeeCCcccEEEEEecCCceEEEEcCeeeccCcchhhHHHHHHhhcccCCCCCCeEEEEeccccHH
Q 037807 3 LAGQAHFLEVEKIIFQGKSEYQNMMVFQSSSYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLLIGGGDGGI 82 (299)
Q Consensus 3 ~~~~~~~~~~~~~l~~~~s~~q~i~v~e~~~~g~~l~ldg~~q~~~~de~~Y~e~l~~~~l~~~~~~~~VL~IG~G~G~~ 82 (299)
||+.+++++++++|++++|+||+|.|++++.+|++|++||. |+++.+++.||||++|++++.++++++||+||||+|.+
T Consensus 8 ~~~~~~~~~~~~vl~~~~s~~q~i~v~~~~~~g~~l~ldg~-q~~~~d~~~y~e~l~~~~~~~~~~~~~VL~iG~G~G~~ 86 (262)
T 2cmg_A 8 TPYLRKEYTIEAKLLDVRSEHNILEIFKSKDFGEIAMLNRQ-LLFKNFLHIESELLAHMGGCTKKELKEVLIVDGFDLEL 86 (262)
T ss_dssp ETTEEEEEECSEEEEEEECSSCEEEEEEETTTEEEEEETTE-EEEGGGTHHHHHHHHHHHHTTSSCCCEEEEESSCCHHH
T ss_pred CCCceEEEEEeeEEEeeECCCceEEEEECCCccEEEEEcCc-ccccchHHHHHHHHHHHhhhcCCCCCEEEEEeCCcCHH
Confidence 58999999999999999999999999999999999999999 99999999999999999998888999999999999999
Q ss_pred HHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEEEcCCCCCCCCCCCCc
Q 037807 83 LREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAIIIDAFDPIRPGHDLFE 162 (299)
Q Consensus 83 ~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~t 162 (299)
+++++++ + .+|++||+|+.+++.|+++++....+++++|++++.+|+.+++ ++||+|++|+++|
T Consensus 87 ~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~-----~~fD~Ii~d~~dp--------- 150 (262)
T 2cmg_A 87 AHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI-----KKYDLIFCLQEPD--------- 150 (262)
T ss_dssp HHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC-----CCEEEEEESSCCC---------
T ss_pred HHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH-----hhCCEEEECCCCh---------
Confidence 9999999 6 8999999999999999999876432345789999999998876 5799999998776
Q ss_pred HHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhhhcCCceeeeEEeecccCCcceeEEecccCCCCCCCCCCCC
Q 037807 163 GPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHRIFKGSASYAWTTVPTYPSGVIGFMLCSTESEGPSVDFIHP 242 (299)
Q Consensus 163 ~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~~F~~~v~~~~~~vP~~~~g~w~~~~ask~~~~~~~~~~~~ 242 (299)
..||+.++++|+|||+++++.++++...+.+..+.++++++| +.+.++...+|+ +|.|+|++||| . .+|
T Consensus 151 ~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F-~~~~~~~~~vP~--~g~~~~~~as~--~------~~p 219 (262)
T 2cmg_A 151 IHRIDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGGVF-SVAMPFVAPLRI--LSNKGYIYASF--K------THP 219 (262)
T ss_dssp HHHHHHHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHHHTTC-SEEEEECCTTCT--TCCEEEEEEES--S------CCT
T ss_pred HHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHhC-CceEEEEEccCC--CcccEEEEeeC--C------CCc
Confidence 459999999999999999998888887778999999999999 567777778998 68999999999 3 245
Q ss_pred CCCCCccccccCCCCCCeeeCHHHHHHHHhcccHHHHHhhcccCC
Q 037807 243 INPIDPDQIFGVAKGPLKFYNSAEVHAAAFCLPTFAKKPAHSHIP 287 (299)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~yy~~~~~h~~~f~lp~~~~~~l~~~~~ 287 (299)
.+++++++. ....++||||+ ++|+|+|+||+|++++|++.++
T Consensus 220 ~~~~~~~~~--~~~~~~~~y~~-~~h~~~f~lp~~~~~~l~~~~~ 261 (262)
T 2cmg_A 220 LKDLMTPKI--EALTSVRYYNE-DIHRAAFALPKNLQEVFKDNIK 261 (262)
T ss_dssp TTTCCHHHH--TTCCSCSSCCH-HHHHHTTCCCHHHHHHGGGTCB
T ss_pred hhhcCHhHh--hccCCCcEECH-HHHHHHcCCCHHHHHHHHHHhc
Confidence 544544332 11257899999 9999999999999999987653
No 13
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=100.00 E-value=4e-50 Score=370.84 Aligned_cols=274 Identities=29% Similarity=0.493 Sum_probs=233.4
Q ss_pred CCCceEeeeeceEEEEeeCCcccEEEEEecCCceEEEEcCeeeccCcchhhHHHHHHhhcccCCCCCCeEEEEeccccHH
Q 037807 3 LAGQAHFLEVEKIIFQGKSEYQNMMVFQSSSYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLLIGGGDGGI 82 (299)
Q Consensus 3 ~~~~~~~~~~~~~l~~~~s~~q~i~v~e~~~~g~~l~ldg~~q~~~~de~~Y~e~l~~~~l~~~~~~~~VL~IG~G~G~~ 82 (299)
+|+.+++++++++|++++|+||+|.|++++.+|++|++||.+|+++.+++.|||+++|++++.++++++||+||||+|.+
T Consensus 12 ~~~~~~~~~~~~vl~~~~s~~q~i~v~~~~~~g~~l~ldg~~q~~~~~e~~Y~e~l~~~~l~~~~~~~~VLdiG~G~G~~ 91 (314)
T 1uir_A 12 TPYETLVRRMERVIASGKTPFQDYFLFESKGFGKVLILDKDVQSTERDEYIYHETLVHPAMLTHPEPKRVLIVGGGEGAT 91 (314)
T ss_dssp SSSEEEEEECSEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSCCCEEEEEECTTSHH
T ss_pred CCCcEEEEecceEEEEEECCCCCEEEEEcCCCcEEEEECCEEeeeecchhHHHHHHHHHHHhcCCCCCeEEEEcCCcCHH
Confidence 48999999999999999999999999999999999999999999999999999999999998888999999999999999
Q ss_pred HHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcC-CCCCCEEEEEccHHHHHHhcCCCCccEEEEcCCCCC---CCCC
Q 037807 83 LREISRHASVEQIHICEIDTMLINVYKEYFPEIAIG-YEDSRVILHVCDGSEYLKTVQSGTFDAIIIDAFDPI---RPGH 158 (299)
Q Consensus 83 ~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~-~~~~rv~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~---~~~~ 158 (299)
+++++++++..+|++||+|+.+++.|+++++..+.+ +++++++++.+|+.+++... +++||+|++|.+++. +++.
T Consensus 92 ~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~-~~~fD~Ii~d~~~~~~~~~~~~ 170 (314)
T 1uir_A 92 LREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERT-EERYDVVIIDLTDPVGEDNPAR 170 (314)
T ss_dssp HHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHC-CCCEEEEEEECCCCBSTTCGGG
T ss_pred HHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhc-CCCccEEEECCCCcccccCcch
Confidence 999999876789999999999999999999764322 45789999999999998765 688999999999887 6667
Q ss_pred CCCcHHHHHHHHHhcCCCcEEEEecCCcc-cchHHHHHHHHHHhhhcCCceeeeEEeecccCCcceeEEecccCCCCCCC
Q 037807 159 DLFEGPFFELVAKALRPGGAMCIQAESLW-FQQFSVQHLIDDCHRIFKGSASYAWTTVPTYPSGVIGFMLCSTESEGPSV 237 (299)
Q Consensus 159 ~l~t~ef~~~~~~~LkpgGvlv~~~~s~~-~~~~~~~~~~~~l~~~F~~~v~~~~~~vP~~~~g~w~~~~ask~~~~~~~ 237 (299)
.+++.+||+.++++|+|||+++++.++++ ...+.++.+.+.++++| +.+.++...+|+| +|.|+|++||| ...+.
T Consensus 171 ~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~F-~~v~~~~~~vP~~-~g~~~~~~as~--~~~p~ 246 (314)
T 1uir_A 171 LLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREAF-RYVRSYKNHIPGF-FLNFGFLLASD--AFDPA 246 (314)
T ss_dssp GGSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTTC-SEEEEEEEEEGGG-TEEEEEEEEES--SSCTT
T ss_pred hccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHHC-CceEEEEEecCCC-CCeEEEEEEEC--CCCcc
Confidence 78899999999999999999999988887 66778899999999999 5788888899999 78999999999 32222
Q ss_pred CCCCCCCCCCccccccCCCCCCeeeCHHHHHHHHhcccHHHHHhhcccC
Q 037807 238 DFIHPINPIDPDQIFGVAKGPLKFYNSAEVHAAAFCLPTFAKKPAHSHI 286 (299)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~yy~~~~~h~~~f~lp~~~~~~l~~~~ 286 (299)
++ .|. .+..+. . ....++||||+ ++|.|+|+||+|+++.|++..
T Consensus 247 ~~-~~~-~~~~~~-~-~~~~~~~~~~~-~~~~~~f~lp~~~~~~~~~~~ 290 (314)
T 1uir_A 247 AF-SEG-VIEARI-R-ERNLALRHLTA-PYLEAMFVLPKDLLEALEKET 290 (314)
T ss_dssp CC-CTT-HHHHHH-H-HTTCCCSSCCH-HHHHHTTCCCHHHHHHHHHCC
T ss_pred cC-CHH-HHHHHh-h-ccccCccccCH-HHHHHHcCCCHHHHHHhhCCC
Confidence 11 111 111111 0 12237899999 999999999999999987544
No 14
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=100.00 E-value=1.7e-48 Score=364.01 Aligned_cols=223 Identities=24% Similarity=0.394 Sum_probs=194.1
Q ss_pred CCC---CceEeeeeceEEEEeeCCcccEEEEEecCCceEEEEcCeeeccCcchhhHHHHHHhhcccCCCCCCeEEEEecc
Q 037807 2 YLA---GQAHFLEVEKIIFQGKSEYQNMMVFQSSSYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLLIGGG 78 (299)
Q Consensus 2 ~~~---~~~~~~~~~~~l~~~~s~~q~i~v~e~~~~g~~l~ldg~~q~~~~de~~Y~e~l~~~~l~~~~~~~~VL~IG~G 78 (299)
+|| |..++|+++++||+++|+||+|+|++++.+|++|+|||.+|++++| +.|||||+|++++.+ +|++||+||+|
T Consensus 138 ~~p~sdg~~~~y~v~~vl~~~~S~yQ~I~V~es~~~Gr~L~LDG~~Q~te~D-~~Y~e~l~h~~l~~~-~pkrVLIIGgG 215 (381)
T 3c6k_A 138 YWPTADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIMGSGKEDY-TGKDVLILGGG 215 (381)
T ss_dssp BCCCTTCCCBBCCEEEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTC-HHHHHHHTTTTCCCC-TTCEEEEEECT
T ss_pred eeECCCCcEEEEEeEEEEEeCCCCCceEEEEEcCCcceEEEECCceeeeCCh-HHHHHHHHHHHhhcC-CCCeEEEECCC
Confidence 577 8899999999999999999999999999999999999999999999 679999999998765 58999999999
Q ss_pred ccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhc-CCC---CCCEEEEEccHHHHHHhc--CCCCccEEEEcCCC
Q 037807 79 DGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAI-GYE---DSRVILHVCDGSEYLKTV--QSGTFDAIIIDAFD 152 (299)
Q Consensus 79 ~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~-~~~---~~rv~v~~~D~~~~l~~~--~~~~fDvIi~D~~~ 152 (299)
+|++++++++|+. ++|++|||||+|+++|+++|+..+. .++ ++|++++++|+++|+++. ..++||+||+|+++
T Consensus 216 dG~~~revlkh~~-~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~yDvIIvDl~D 294 (381)
T 3c6k_A 216 DGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTA 294 (381)
T ss_dssp TCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCCEEEEEEECCS
T ss_pred cHHHHHHHHhcCC-ceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCceeEEEECCCC
Confidence 9999999999975 8999999999999999999987643 333 456999999999999753 25789999999876
Q ss_pred C------CCCCCCCCcHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhhhcCCceee--eEEeecccCCccee
Q 037807 153 P------IRPGHDLFEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHRIFKGSASY--AWTTVPTYPSGVIG 224 (299)
Q Consensus 153 ~------~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~~F~~~v~~--~~~~vP~~~~g~w~ 224 (299)
+ .+++..||+++||+.++++|+|||++++|+++++.. +.++.+.++++++| +.+.+ +.+.||+|+ |.|+
T Consensus 295 ~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~~-~~~~~i~~tl~~vF-~~v~~~~~~~~VPSy~-~~W~ 371 (381)
T 3c6k_A 295 VPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLT-EALSLYEEQLGRLY-CPVEFSKEIVCVPSYL-ELWV 371 (381)
T ss_dssp SCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCH-HHHHHHHHHHTTSS-SCEEEEEEEECCGGGS-SCEE
T ss_pred CcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCCCcch-hHHHHHHHHHHHhC-CcceEeeEEEEecCCC-Ccee
Confidence 4 234457899999999999999999999999998874 67889999999999 45554 357899998 5899
Q ss_pred EEeccc
Q 037807 225 FMLCST 230 (299)
Q Consensus 225 ~~~ask 230 (299)
|++|||
T Consensus 372 F~~aSK 377 (381)
T 3c6k_A 372 FYTVWK 377 (381)
T ss_dssp EEEEEE
T ss_pred eeEEEC
Confidence 999999
No 15
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=100.00 E-value=8.6e-44 Score=331.11 Aligned_cols=223 Identities=25% Similarity=0.422 Sum_probs=192.5
Q ss_pred CCC---CceEeeeeceEEEEeeCCcccEEEEEecCCceEEEEcCeeeccCcchhhHHHHHHhhcccCCCCCCeEEEEecc
Q 037807 2 YLA---GQAHFLEVEKIIFQGKSEYQNMMVFQSSSYGKVFVLDGALQLTEKDECAYQEMITHLPLCSIPNPKKVLLIGGG 78 (299)
Q Consensus 2 ~~~---~~~~~~~~~~~l~~~~s~~q~i~v~e~~~~g~~l~ldg~~q~~~~de~~Y~e~l~~~~l~~~~~~~~VL~IG~G 78 (299)
+|| +.+++++++++|++++|+||+|.|++++.+|++|++||.+|++++| +.|||||+|+++ .|+++++||+||||
T Consensus 121 ~~~~~~~~~~~~~v~~vl~~~~S~yQ~I~V~es~~~G~~L~LDG~~q~te~D-~~YhE~l~~~~~-~~p~pkrVL~IGgG 198 (364)
T 2qfm_A 121 YWPTADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIMGSGK-EDYTGKDVLILGGG 198 (364)
T ss_dssp BCCCTTCCCBBCCEEEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTC-HHHHHHHTTTTC-CCCTTCEEEEEECT
T ss_pred eeEccCCcEEEEEeeeEEEeccCCCeeEEEEEeCCcceEEEECCEEeeecCc-hHHHHHHhhhhh-hCCCCCEEEEEECC
Confidence 688 5799999999999999999999999999999999999999999999 999999999987 68899999999999
Q ss_pred ccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhc-CCCCC---CEEEEEccHHHHHHhc--CCCCccEEEEcCCC
Q 037807 79 DGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAI-GYEDS---RVILHVCDGSEYLKTV--QSGTFDAIIIDAFD 152 (299)
Q Consensus 79 ~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~-~~~~~---rv~v~~~D~~~~l~~~--~~~~fDvIi~D~~~ 152 (299)
+|++++++++++. .+|++||+|+.++++|+++++..+. .++++ |++++++|+++|+++. ..++||+||+|+++
T Consensus 199 ~G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~fDvII~D~~d 277 (364)
T 2qfm_A 199 DGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTA 277 (364)
T ss_dssp TCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCCEEEEEEECCS
T ss_pred hhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCCceEEEECCCC
Confidence 9999999999975 8999999999999999999986532 34554 8999999999999852 26789999999998
Q ss_pred -CCCC-CCCCCcHHHHHHH----HHhcCCCcEEEEecCCcccchHHHHHHHHHHhhhcCCceee--eEEeecccCCccee
Q 037807 153 -PIRP-GHDLFEGPFFELV----AKALRPGGAMCIQAESLWFQQFSVQHLIDDCHRIFKGSASY--AWTTVPTYPSGVIG 224 (299)
Q Consensus 153 -~~~~-~~~l~t~ef~~~~----~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~~F~~~v~~--~~~~vP~~~~g~w~ 224 (299)
|.++ +..|++.+||+.+ +++|+|||++++|+++++. .+....+.+.+++.| +.+.+ |.+.||+|++ .|+
T Consensus 278 ~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~-~e~~~~~~~~l~~~F-~~v~~~~~~~~vPsy~~-~w~ 354 (364)
T 2qfm_A 278 VPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNL-TEALSLYEEQLGRLY-CPVEFSKEIVCVPSYLE-LWV 354 (364)
T ss_dssp SCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTC-HHHHHHHHHHHTTSS-SCEEEEEEEECCGGGSS-CEE
T ss_pred cccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcch-HHHHHHHHHHHHHhC-CceEEeeEeeecCCchh-heE
Confidence 7654 3358999999999 8999999999999988776 444444444599999 56777 7899999985 999
Q ss_pred EEeccc
Q 037807 225 FMLCST 230 (299)
Q Consensus 225 ~~~ask 230 (299)
|..|+|
T Consensus 355 f~~~~k 360 (364)
T 2qfm_A 355 FYTVWK 360 (364)
T ss_dssp EEEEEE
T ss_pred eEEeec
Confidence 999999
No 16
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=100.00 E-value=4.5e-34 Score=262.62 Aligned_cols=231 Identities=16% Similarity=0.196 Sum_probs=183.1
Q ss_pred CCcccEEEEEecC--CceEEEEcCeeeccC------cchhhHHHHHHhhccc---CCCCCC--eEEEEeccccHHHHHHH
Q 037807 21 SEYQNMMVFQSSS--YGKVFVLDGALQLTE------KDECAYQEMITHLPLC---SIPNPK--KVLLIGGGDGGILREIS 87 (299)
Q Consensus 21 s~~q~i~v~e~~~--~g~~l~ldg~~q~~~------~de~~Y~e~l~~~~l~---~~~~~~--~VL~IG~G~G~~~~~l~ 87 (299)
..|...+|..... +|++|++||.+|++. .+++.|||+|+|++++ .|++++ +||+||||+|.++++++
T Consensus 29 ~~~~~~~~~~d~~~~~g~~L~lDG~~Qs~~~l~dP~~le~~Y~e~m~~~~~~l~~~~p~p~~~rVLdIG~G~G~la~~la 108 (317)
T 3gjy_A 29 GEYSVIELEADSYTTDGWLISINGVPSSHIVLGQPQALEFEYMRWIATGARAFIDAHQDASKLRITHLGGGACTMARYFA 108 (317)
T ss_dssp CSSSEEEEEECSSSTTEEEEEETTEEEEEEETTCTTCCCSHHHHHHHHHHHHHHHHHSCGGGCEEEEESCGGGHHHHHHH
T ss_pred ceeeeEEEEecCCCCceEEEEECCEeEEEEECCCCcchhhHHHHHHHHHHHhhcccCCCCCCCEEEEEECCcCHHHHHHH
Confidence 4566688888764 899999999999984 5899999999999987 577766 99999999999999999
Q ss_pred h-cCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEEEcCCCCCCCCCCCCcHHHH
Q 037807 88 R-HASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAIIIDAFDPIRPGHDLFEGPFF 166 (299)
Q Consensus 88 ~-~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~ 166 (299)
+ ++. .+|++||+|+.|++.||++++.. .++|++++++|++++++..++++||+||+|.+++.+.+..|++.+||
T Consensus 109 ~~~p~-~~v~~VEidp~vi~~Ar~~~~~~----~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~~~~~~~L~t~efl 183 (317)
T 3gjy_A 109 DVYPQ-SRNTVVELDAELARLSREWFDIP----RAPRVKIRVDDARMVAESFTPASRDVIIRDVFAGAITPQNFTTVEFF 183 (317)
T ss_dssp HHSTT-CEEEEEESCHHHHHHHHHHSCCC----CTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTTSCCCGGGSBHHHH
T ss_pred HHCCC-cEEEEEECCHHHHHHHHHhcccc----CCCceEEEECcHHHHHhhccCCCCCEEEECCCCccccchhhhHHHHH
Confidence 8 554 48999999999999999999753 46899999999999998654578999999999988777889999999
Q ss_pred HHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhhhcCCceeeeEEeecccCCcceeE--EecccCCCCCCCCCCCCC-
Q 037807 167 ELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHRIFKGSASYAWTTVPTYPSGVIGF--MLCSTESEGPSVDFIHPI- 243 (299)
Q Consensus 167 ~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~~F~~~v~~~~~~vP~~~~g~w~~--~~ask~~~~~~~~~~~~~- 243 (299)
+.++++|+|||+|+++.++. .....++.++++++++| +.+..+....|.+. ..|+. ++||+ .. .|.
T Consensus 184 ~~~~r~LkpgGvlv~~~~~~-~~~~~~~~~~~tL~~vF-~~v~~~~~~~~~~g-~~~gN~Vl~As~--~p------lp~~ 252 (317)
T 3gjy_A 184 EHCHRGLAPGGLYVANCGDH-SDLRGAKSELAGMMEVF-EHVAVIADPPMLKG-RRYGNIILMGSD--TE------FFSS 252 (317)
T ss_dssp HHHHHHEEEEEEEEEEEEEC-TTCHHHHHHHHHHHHHC-SEEEEEECHHHHTT-SSCEEEEEEEES--SC------CCCT
T ss_pred HHHHHhcCCCcEEEEEecCC-cchHHHHHHHHHHHHHC-CceEEEEecCCCCC-CcCceEEEEEEC--CC------CCcc
Confidence 99999999999999998653 23456889999999999 56655544556553 34444 88998 31 122
Q ss_pred -----CCCCccccccCCCCCCeeeCHHHHHHH
Q 037807 244 -----NPIDPDQIFGVAKGPLKFYNSAEVHAA 270 (299)
Q Consensus 244 -----~~~~~~~~~~~~~~~~~yy~~~~~h~~ 270 (299)
+.+..+.. ....+.||+++ +.+.+
T Consensus 253 ~~~~~~~l~r~~~--~~~~p~~~~~~-~~l~~ 281 (317)
T 3gjy_A 253 NSTEASAITRELL--GGGVPAQYKDE-SWVRK 281 (317)
T ss_dssp TSHHHHHHHHHHT--SSSSCCEEECH-HHHHH
T ss_pred cccchHHHHHHHc--CCCCCeEEECH-HHHHH
Confidence 12222221 23457899999 65543
No 17
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.61 E-value=1.9e-15 Score=133.08 Aligned_cols=122 Identities=16% Similarity=0.222 Sum_probs=95.0
Q ss_pred hhHHHHHHhhcccCCCCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccH
Q 037807 52 CAYQEMITHLPLCSIPNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDG 131 (299)
Q Consensus 52 ~~Y~e~l~~~~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~ 131 (299)
..|.+.++... .++..+||+||||+|.++..++++. ..+|++||+||.+++.|+++.... ..+++++.+|+
T Consensus 47 ~~~m~~~a~~~---~~~G~rVLdiG~G~G~~~~~~~~~~-~~~v~~id~~~~~~~~a~~~~~~~-----~~~~~~~~~~a 117 (236)
T 3orh_A 47 TPYMHALAAAA---SSKGGRVLEVGFGMAIAASKVQEAP-IDEHWIIECNDGVFQRLRDWAPRQ-----THKVIPLKGLW 117 (236)
T ss_dssp HHHHHHHHHHH---TTTCEEEEEECCTTSHHHHHHTTSC-EEEEEEEECCHHHHHHHHHHGGGC-----SSEEEEEESCH
T ss_pred HHHHHHHHHhh---ccCCCeEEEECCCccHHHHHHHHhC-CcEEEEEeCCHHHHHHHHHHHhhC-----CCceEEEeehH
Confidence 44555554432 2467899999999999999999875 468999999999999999987653 56899999999
Q ss_pred HHHHHhcCCCCccEEEEcCCCCCCCCCCC-CcHHHHHHHHHhcCCCcEEEEe
Q 037807 132 SEYLKTVQSGTFDAIIIDAFDPIRPGHDL-FEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 132 ~~~l~~~~~~~fDvIi~D~~~~~~~~~~l-~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
.+.+...++++||.|+.|.........++ ....++++++|+|||||+|++.
T Consensus 118 ~~~~~~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 118 EDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp HHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred HhhcccccccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 98877666788999999876543222222 2357889999999999999873
No 18
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.60 E-value=8.1e-15 Score=124.03 Aligned_cols=110 Identities=13% Similarity=0.090 Sum_probs=88.7
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.+..+|||+|||+|.++.++++.+ ..+|++||+|+.+++.|++++...+ -++++++.+|+.+++...+.++||+|
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~~~~~~~~fD~i 117 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRG-AASVLFVESDQRSAAVIARNIEALG----LSGATLRRGAVAAVVAAGTTSPVDLV 117 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTT-CSEEEEEECCHHHHHHHHHHHHHHT----CSCEEEEESCHHHHHHHCCSSCCSEE
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCC-CCeEEEEECCHHHHHHHHHHHHHcC----CCceEEEEccHHHHHhhccCCCccEE
Confidence 357899999999999999888763 5689999999999999999987652 25899999999998865446789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHH--hcCCCcEEEEecC
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAK--ALRPGGAMCIQAE 184 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~--~LkpgGvlv~~~~ 184 (299)
++|.+...... ...++++.+.+ .|+|||+++++..
T Consensus 118 ~~~~p~~~~~~---~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 118 LADPPYNVDSA---DVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp EECCCTTSCHH---HHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred EECCCCCcchh---hHHHHHHHHHhcCccCCCeEEEEEec
Confidence 99865432100 12678888988 9999999999753
No 19
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.60 E-value=3.2e-14 Score=126.04 Aligned_cols=106 Identities=25% Similarity=0.267 Sum_probs=87.6
Q ss_pred CCCeEEEEeccccHHHHHHHhcCC-ccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcC-CCCccE
Q 037807 68 NPKKVLLIGGGDGGILREISRHAS-VEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQ-SGTFDA 145 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~-~~~fDv 145 (299)
++++|||||||+|..+..+++..+ ..+|++||+|+.+++.|++++...+ + .++++++.+|+.+++.... .++||+
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g--~-~~~v~~~~~d~~~~l~~~~~~~~fD~ 139 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAG--V-DQRVTLREGPALQSLESLGECPAFDL 139 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTT--C-TTTEEEEESCHHHHHHTCCSCCCCSE
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--C-CCcEEEEEcCHHHHHHhcCCCCCeEE
Confidence 578999999999999999998633 5799999999999999999987542 1 3589999999999887542 248999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 146 IIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 146 Ii~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
|++|...+. ...+++.+.+.|+|||++++..
T Consensus 140 V~~d~~~~~-------~~~~l~~~~~~LkpGG~lv~~~ 170 (248)
T 3tfw_A 140 IFIDADKPN-------NPHYLRWALRYSRPGTLIIGDN 170 (248)
T ss_dssp EEECSCGGG-------HHHHHHHHHHTCCTTCEEEEEC
T ss_pred EEECCchHH-------HHHHHHHHHHhcCCCeEEEEeC
Confidence 999864321 2679999999999999999854
No 20
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.59 E-value=1.8e-14 Score=127.84 Aligned_cols=107 Identities=16% Similarity=0.148 Sum_probs=88.0
Q ss_pred CCCCeEEEEeccccHHHHHHHhc-CCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcC-----C
Q 037807 67 PNPKKVLLIGGGDGGILREISRH-ASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQ-----S 140 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~-----~ 140 (299)
.++++||+||||+|..+..+++. ++..+|++||+|+.+++.|++++...+ + .++++++.+|+.+++.... .
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g--~-~~~i~~~~gda~~~l~~l~~~~~~~ 154 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAG--V-DHKIDFREGPALPVLDEMIKDEKNH 154 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTT--C-GGGEEEEESCHHHHHHHHHHSGGGT
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--C-CCCeEEEECCHHHHHHHHHhccCCC
Confidence 36789999999999999999986 335799999999999999999987642 1 3689999999998876431 4
Q ss_pred CCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 141 GTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 141 ~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++||+|++|.... ....+++.+.+.|+|||++++..
T Consensus 155 ~~fD~V~~d~~~~-------~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 155 GSYDFIFVDADKD-------NYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp TCBSEEEECSCST-------THHHHHHHHHHHBCTTCCEEEEC
T ss_pred CCEEEEEEcCchH-------HHHHHHHHHHHhCCCCeEEEEec
Confidence 7899999986432 13789999999999999999853
No 21
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.59 E-value=9.5e-15 Score=128.68 Aligned_cols=107 Identities=18% Similarity=0.202 Sum_probs=88.3
Q ss_pred CCCCeEEEEeccccHHHHHHHhc-CCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcC-----C
Q 037807 67 PNPKKVLLIGGGDGGILREISRH-ASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQ-----S 140 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~-----~ 140 (299)
.++++||+||||+|..+.++++. ++..+|+++|+|+.+++.|++++...+ + .++++++.+|+.+++.... .
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g--~-~~~i~~~~gda~~~l~~l~~~~~~~ 145 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAG--V-EHKINFIESDAMLALDNLLQGQESE 145 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT--C-GGGEEEEESCHHHHHHHHHHSTTCT
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--C-CCcEEEEEcCHHHHHHHHHhccCCC
Confidence 46789999999999999999985 435799999999999999999987542 2 3589999999998876431 4
Q ss_pred CCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 141 GTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 141 ~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++||+|++|.... ...++++.+.+.|+|||++++..
T Consensus 146 ~~fD~I~~d~~~~-------~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 146 GSYDFGFVDADKP-------NYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp TCEEEEEECSCGG-------GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCcCEEEECCchH-------HHHHHHHHHHHhcCCCeEEEEec
Confidence 7899999986432 13789999999999999999854
No 22
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.58 E-value=3.7e-14 Score=122.80 Aligned_cols=106 Identities=21% Similarity=0.231 Sum_probs=87.0
Q ss_pred CCCeEEEEeccccHHHHHHHhcCC-ccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcC---CCCc
Q 037807 68 NPKKVLLIGGGDGGILREISRHAS-VEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQ---SGTF 143 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~---~~~f 143 (299)
++.+|||||||+|..+..+++..+ ..+|++||+++.+++.|++++...+ + .++++++.+|+.+.+.... .++|
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~-~~~v~~~~~d~~~~~~~~~~~~~~~f 134 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERAN--L-NDRVEVRTGLALDSLQQIENEKYEPF 134 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTT--C-TTTEEEEESCHHHHHHHHHHTTCCCC
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--C-CCcEEEEEcCHHHHHHHHHhcCCCCc
Confidence 578999999999999999998643 5799999999999999999987542 1 3579999999988766431 1679
Q ss_pred cEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 144 DAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 144 DvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
|+|++|...+ ....+++.+.+.|+|||++++..
T Consensus 135 D~v~~d~~~~-------~~~~~l~~~~~~L~pgG~lv~~~ 167 (223)
T 3duw_A 135 DFIFIDADKQ-------NNPAYFEWALKLSRPGTVIIGDN 167 (223)
T ss_dssp SEEEECSCGG-------GHHHHHHHHHHTCCTTCEEEEES
T ss_pred CEEEEcCCcH-------HHHHHHHHHHHhcCCCcEEEEeC
Confidence 9999986532 12689999999999999999854
No 23
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.58 E-value=2.8e-14 Score=125.05 Aligned_cols=104 Identities=20% Similarity=0.259 Sum_probs=87.8
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHH-hcCCCCccEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLK-TVQSGTFDAI 146 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~-~~~~~~fDvI 146 (299)
++.+|||||||+|..+..+++..+..+|++||+|+.+++.|++++...+. .++++++.+|+.+++. .. +++||+|
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~~~~~-~~~fD~V 146 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHF---ENQVRIIEGNALEQFENVN-DKVYDMI 146 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTC---TTTEEEEESCGGGCHHHHT-TSCEEEE
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCcEEEEECCHHHHHHhhc-cCCccEE
Confidence 57899999999999999999854467999999999999999999876421 3589999999998776 54 6789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
++|..... ..++++.+.+.|+|||++++.
T Consensus 147 ~~~~~~~~-------~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 147 FIDAAKAQ-------SKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp EEETTSSS-------HHHHHHHHGGGEEEEEEEEEE
T ss_pred EEcCcHHH-------HHHHHHHHHHhcCCCeEEEEe
Confidence 99864321 377999999999999999984
No 24
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.57 E-value=1e-14 Score=125.41 Aligned_cols=104 Identities=16% Similarity=0.155 Sum_probs=86.3
Q ss_pred CCCeEEEEeccccHHHHHHHhcCC-ccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHAS-VEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
++++|||||||+|..+..+++..+ ..+|++||+|+.+++.|++++...+. .++++++.+|+.+++... ++ ||+|
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~~~~-~~-fD~v 130 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGL---IDRVELQVGDPLGIAAGQ-RD-IDIL 130 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSG---GGGEEEEESCHHHHHTTC-CS-EEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC---CceEEEEEecHHHHhccC-CC-CCEE
Confidence 578999999999999999998633 57899999999999999998875421 358999999999987654 46 9999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++|.... ....+++.+.+.|+|||++++..
T Consensus 131 ~~~~~~~-------~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 131 FMDCDVF-------NGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp EEETTTS-------CHHHHHHHHGGGEEEEEEEEEES
T ss_pred EEcCChh-------hhHHHHHHHHHhcCCCeEEEEEC
Confidence 9995421 23789999999999999999853
No 25
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.57 E-value=1.8e-14 Score=125.78 Aligned_cols=105 Identities=15% Similarity=0.155 Sum_probs=87.4
Q ss_pred CeEEEEeccccHHHHHHHhc-CCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEEE
Q 037807 70 KKVLLIGGGDGGILREISRH-ASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAIII 148 (299)
Q Consensus 70 ~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi~ 148 (299)
.+||+||||+|..+..+++. ++..+|++||+|+++++.|++++...+ +.+++++++.+|+.+++....+++||+|++
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g--~~~~~i~~~~gda~~~l~~~~~~~fD~V~~ 135 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAG--YSPSRVRFLLSRPLDVMSRLANDSYQLVFG 135 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTT--CCGGGEEEECSCHHHHGGGSCTTCEEEEEE
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCcCcEEEEEcCHHHHHHHhcCCCcCeEEE
Confidence 39999999999999999984 445799999999999999999987642 222589999999999987643578999999
Q ss_pred cCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 149 DAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 149 D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
|..... ..++++.+.+.|+|||++++..
T Consensus 136 d~~~~~-------~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 136 QVSPMD-------LKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp CCCTTT-------HHHHHHHHHHHEEEEEEEEETT
T ss_pred cCcHHH-------HHHHHHHHHHHcCCCcEEEEeC
Confidence 864321 2679999999999999999853
No 26
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.56 E-value=4.1e-14 Score=123.28 Aligned_cols=127 Identities=18% Similarity=0.225 Sum_probs=99.0
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHh-cCCCCccEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKT-VQSGTFDAI 146 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~~fDvI 146 (299)
+..+|||||||+|.++..+++..+..+|++||+++.+++.|+++.... .-++++++.+|+.+++.. .++++||.|
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~----~l~nv~~~~~Da~~~l~~~~~~~~~d~v 109 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEE----GLSNLRVMCHDAVEVLHKMIPDNSLRMV 109 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHT----TCSSEEEECSCHHHHHHHHSCTTCEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHh----CCCcEEEEECCHHHHHHHHcCCCChheE
Confidence 467899999999999999998655678999999999999999987654 235799999999998664 346899999
Q ss_pred EEcCCCCCCCC----CCCCcHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhh
Q 037807 147 IIDAFDPIRPG----HDLFEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHR 202 (299)
Q Consensus 147 i~D~~~~~~~~----~~l~t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~ 202 (299)
++..++|+... ..+...+|++.+.+.|||||+|++.+.. ......+...+.+
T Consensus 110 ~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~----~~~~~~~~~~~~~ 165 (218)
T 3dxy_A 110 QLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDW----EPYAEHMLEVMSS 165 (218)
T ss_dssp EEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESC----HHHHHHHHHHHHT
T ss_pred EEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCC----HHHHHHHHHHHHh
Confidence 99877775332 2345568999999999999999986533 2334445555544
No 27
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.54 E-value=7.1e-14 Score=120.59 Aligned_cols=113 Identities=15% Similarity=0.265 Sum_probs=90.5
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAII 147 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi 147 (299)
+..+|||||||+|.++..+++..+..++++||+++.+++.|++++... .-++++++.+|+.++....++++||+|+
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~----~~~~v~~~~~d~~~~~~~~~~~~~D~i~ 116 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEV----GVPNIKLLWVDGSDLTDYFEDGEIDRLY 116 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH----CCSSEEEEECCSSCGGGTSCTTCCSEEE
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHc----CCCCEEEEeCCHHHHHhhcCCCCCCEEE
Confidence 467899999999999999998655678999999999999999987654 2258999999998743222357899999
Q ss_pred EcCCCCCCC----CCCCCcHHHHHHHHHhcCCCcEEEEecC
Q 037807 148 IDAFDPIRP----GHDLFEGPFFELVAKALRPGGAMCIQAE 184 (299)
Q Consensus 148 ~D~~~~~~~----~~~l~t~ef~~~~~~~LkpgGvlv~~~~ 184 (299)
++.++|+.. ...+...++++.+.+.|+|||++++.+.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 117 LNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp EESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred EECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 998776422 1223457899999999999999998654
No 28
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.54 E-value=9.3e-14 Score=120.27 Aligned_cols=113 Identities=14% Similarity=0.215 Sum_probs=91.1
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAII 147 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi 147 (299)
+..+|||||||+|.++..+++..+..+|++||+++.+++.|++++... .-++++++.+|+.++....+++.||.|+
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~----~~~nv~~~~~d~~~l~~~~~~~~~d~v~ 113 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDS----EAQNVKLLNIDADTLTDVFEPGEVKRVY 113 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHS----CCSSEEEECCCGGGHHHHCCTTSCCEEE
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHc----CCCCEEEEeCCHHHHHhhcCcCCcCEEE
Confidence 467899999999999999998655678999999999999999987653 2357999999998854323357899999
Q ss_pred EcCCCCCCCC----CCCCcHHHHHHHHHhcCCCcEEEEecC
Q 037807 148 IDAFDPIRPG----HDLFEGPFFELVAKALRPGGAMCIQAE 184 (299)
Q Consensus 148 ~D~~~~~~~~----~~l~t~ef~~~~~~~LkpgGvlv~~~~ 184 (299)
+..++|+... ..+....+++.+.+.|+|||.+++.+.
T Consensus 114 ~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td 154 (213)
T 2fca_A 114 LNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTD 154 (213)
T ss_dssp EESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEES
T ss_pred EECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeC
Confidence 9877765321 234568899999999999999998653
No 29
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.54 E-value=1.9e-14 Score=127.30 Aligned_cols=105 Identities=25% Similarity=0.320 Sum_probs=86.7
Q ss_pred CCCeEEEEeccccHHHHHHHhcC-CccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcC----CCC
Q 037807 68 NPKKVLLIGGGDGGILREISRHA-SVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQ----SGT 142 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~----~~~ 142 (299)
++++|||||||+|..+..+++.. +..+|++||+++++++.|++++...+. .++++++.+|+.+++.... .++
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~---~~~i~~~~gda~~~l~~~~~~~~~~~ 136 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQ---EHKIKLRLGPALDTLHSLLNEGGEHQ 136 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTC---TTTEEEEESCHHHHHHHHHHHHCSSC
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCcEEEEEcCHHHHHHHHhhccCCCC
Confidence 57899999999999999999853 357899999999999999999876421 3689999999998876431 378
Q ss_pred ccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 143 FDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 143 fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
||+|++|.... ....+++.+.+.|+|||++++.
T Consensus 137 fD~V~~d~~~~-------~~~~~l~~~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 137 FDFIFIDADKT-------NYLNYYELALKLVTPKGLIAID 169 (242)
T ss_dssp EEEEEEESCGG-------GHHHHHHHHHHHEEEEEEEEEE
T ss_pred EeEEEEcCChH-------HhHHHHHHHHHhcCCCeEEEEE
Confidence 99999996522 1267899999999999999985
No 30
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.51 E-value=3.1e-13 Score=113.19 Aligned_cols=125 Identities=16% Similarity=0.175 Sum_probs=94.3
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.+..+|||+|||+|..+..+++. ..+++++|+++.+++.+++++...+ ..+.+++++.+|+.+.+. .++||+|
T Consensus 51 ~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~--~~~~~~~~~~~d~~~~~~---~~~~D~v 123 (194)
T 1dus_A 51 DKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNN--LDNYDIRVVHSDLYENVK---DRKYNKI 123 (194)
T ss_dssp CTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTT--CTTSCEEEEECSTTTTCT---TSCEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcC--CCccceEEEECchhcccc---cCCceEE
Confidence 46789999999999999999987 4689999999999999999876541 122259999999887543 5689999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhhhcC
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHRIFK 205 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~~F~ 205 (299)
+++.+..... -....+++.+.+.|+|||.+++...+. .....+.+.+++.|.
T Consensus 124 ~~~~~~~~~~---~~~~~~l~~~~~~L~~gG~l~~~~~~~----~~~~~~~~~l~~~~~ 175 (194)
T 1dus_A 124 ITNPPIRAGK---EVLHRIIEEGKELLKDNGEIWVVIQTK----QGAKSLAKYMKDVFG 175 (194)
T ss_dssp EECCCSTTCH---HHHHHHHHHHHHHEEEEEEEEEEEEST----HHHHHHHHHHHHHHS
T ss_pred EECCCcccch---hHHHHHHHHHHHHcCCCCEEEEEECCC----CChHHHHHHHHHHhc
Confidence 9976433110 012578999999999999999865332 233456667777773
No 31
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.51 E-value=1.7e-13 Score=118.63 Aligned_cols=106 Identities=23% Similarity=0.336 Sum_probs=86.8
Q ss_pred CCCeEEEEeccccHHHHHHHhc-CCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCC----CC
Q 037807 68 NPKKVLLIGGGDGGILREISRH-ASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQS----GT 142 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~----~~ 142 (299)
++.+|||||||+|..+..+++. ++..+|++||+++.+++.|++++...+. .++++++.+|+.+++..... ++
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~~~~~~~~~~~~ 140 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGL---SDKIGLRLSPAKDTLAELIHAGQAWQ 140 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTC---TTTEEEEESCHHHHHHHHHTTTCTTC
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCC---CCceEEEeCCHHHHHHHhhhccCCCC
Confidence 5789999999999999999985 3357999999999999999999875421 35799999999888765422 78
Q ss_pred ccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 143 FDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 143 fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
||+|++|.... ....+++.+.+.|+|||++++..
T Consensus 141 fD~v~~~~~~~-------~~~~~l~~~~~~L~pgG~lv~~~ 174 (225)
T 3tr6_A 141 YDLIYIDADKA-------NTDLYYEESLKLLREGGLIAVDN 174 (225)
T ss_dssp EEEEEECSCGG-------GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccEEEECCCHH-------HHHHHHHHHHHhcCCCcEEEEeC
Confidence 99999886422 12678999999999999998853
No 32
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.51 E-value=2.1e-13 Score=116.51 Aligned_cols=120 Identities=14% Similarity=0.147 Sum_probs=93.8
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.+..+|||||||+|..+..+++..+..+|++||+|+.+++.|++++... .-++++++.+|+.+.+.. .++||+|
T Consensus 39 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~----~~~~v~~~~~d~~~~~~~--~~~~D~i 112 (204)
T 3e05_A 39 QDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKF----VARNVTLVEAFAPEGLDD--LPDPDRV 112 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHH----TCTTEEEEECCTTTTCTT--SCCCSEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHh----CCCcEEEEeCChhhhhhc--CCCCCEE
Confidence 4568999999999999999998765679999999999999999988765 236899999998776543 3679999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhhh
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHRI 203 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~~ 203 (299)
+++.... ...++++.+.+.|+|||.+++.... .+....+.+.+++.
T Consensus 113 ~~~~~~~-------~~~~~l~~~~~~LkpgG~l~~~~~~----~~~~~~~~~~l~~~ 158 (204)
T 3e05_A 113 FIGGSGG-------MLEEIIDAVDRRLKSEGVIVLNAVT----LDTLTKAVEFLEDH 158 (204)
T ss_dssp EESCCTT-------CHHHHHHHHHHHCCTTCEEEEEECB----HHHHHHHHHHHHHT
T ss_pred EECCCCc-------CHHHHHHHHHHhcCCCeEEEEEecc----cccHHHHHHHHHHC
Confidence 9986543 1378999999999999999985422 23344455555443
No 33
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.51 E-value=1.5e-13 Score=122.66 Aligned_cols=130 Identities=13% Similarity=0.209 Sum_probs=95.3
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchh---hhcCCCCCCEEEEEccHHHHHHh-----c
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPE---IAIGYEDSRVILHVCDGSEYLKT-----V 138 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~---~~~~~~~~rv~v~~~D~~~~l~~-----~ 138 (299)
.+..+|||||||+|.++..++++.+..+|++||+++.+++.|++++.. .+ + ..+++++.+|+.++... .
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~--l-~~~v~~~~~D~~~~~~~~~~~~~ 111 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAA--F-SARIEVLEADVTLRAKARVEAGL 111 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTT--T-GGGEEEEECCTTCCHHHHHHTTC
T ss_pred cCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCC--C-cceEEEEeCCHHHHhhhhhhhcc
Confidence 456799999999999999999875557899999999999999999875 31 1 24799999999877431 2
Q ss_pred CCCCccEEEEcCCCCCCC--------------CCCCCcHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhhhc
Q 037807 139 QSGTFDAIIIDAFDPIRP--------------GHDLFEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHRIF 204 (299)
Q Consensus 139 ~~~~fDvIi~D~~~~~~~--------------~~~l~t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~~F 204 (299)
+.++||+|+++++..... .......++++.+.+.|+|||.|++.. ....+..+.+.+++.|
T Consensus 112 ~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~-----~~~~~~~~~~~l~~~~ 186 (260)
T 2ozv_A 112 PDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS-----RPQSVAEIIAACGSRF 186 (260)
T ss_dssp CTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE-----CGGGHHHHHHHHTTTE
T ss_pred CCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE-----cHHHHHHHHHHHHhcC
Confidence 357899999986542210 001123688999999999999998743 2234556777776656
No 34
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.50 E-value=4.4e-13 Score=117.78 Aligned_cols=147 Identities=9% Similarity=0.022 Sum_probs=103.5
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHh-cCCCCccEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKT-VQSGTFDAI 146 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~~fDvI 146 (299)
++.+|||||||+|..+..+++..+..+|++||+++.+++.|+++....+ -++++++.+|+.++... ...++||+|
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~~~~~~~~~fD~V 145 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQ----LENTTFCHDRAETFGQRKDVRESYDIV 145 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHT----CSSEEEEESCHHHHTTCTTTTTCEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC----CCCEEEEeccHHHhcccccccCCccEE
Confidence 5689999999999999999864445789999999999999999877652 24699999999886531 014689999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhhh-cCCceeeeEEeecccCCcceeE
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHRI-FKGSASYAWTTVPTYPSGVIGF 225 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~~-F~~~v~~~~~~vP~~~~g~w~~ 225 (299)
+++.... ...+++.+.+.|+|||.+++..+.. ..+....+.+.+++. | .........+|. ..+.+.+
T Consensus 146 ~~~~~~~--------~~~~l~~~~~~LkpgG~l~~~~g~~--~~~~~~~~~~~l~~~g~-~~~~~~~~~~~~-~~~~~~l 213 (240)
T 1xdz_A 146 TARAVAR--------LSVLSELCLPLVKKNGLFVALKAAS--AEEELNAGKKAITTLGG-ELENIHSFKLPI-EESDRNI 213 (240)
T ss_dssp EEECCSC--------HHHHHHHHGGGEEEEEEEEEEECC---CHHHHHHHHHHHHHTTE-EEEEEEEEECTT-TCCEEEE
T ss_pred EEeccCC--------HHHHHHHHHHhcCCCCEEEEEeCCC--chHHHHHHHHHHHHcCC-eEeEEEEEecCC-CCCceEE
Confidence 9976321 2789999999999999999864332 223345555555542 3 122221223443 2456777
Q ss_pred Eeccc
Q 037807 226 MLCST 230 (299)
Q Consensus 226 ~~ask 230 (299)
++..|
T Consensus 214 ~~~~k 218 (240)
T 1xdz_A 214 MVIRK 218 (240)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 87777
No 35
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.50 E-value=9.7e-14 Score=121.51 Aligned_cols=110 Identities=17% Similarity=0.234 Sum_probs=84.7
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.+..+|||||||+|..+..+++.. ..+|++||+++.+++.|+++.... ..+++++.+|+.+.+...++++||+|
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~l~~a~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~fD~V 132 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAP-IDEHWIIECNDGVFQRLRDWAPRQ-----THKVIPLKGLWEDVAPTLPDGHFDGI 132 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSC-EEEEEEEECCHHHHHHHHHHGGGC-----SSEEEEEESCHHHHGGGSCTTCEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHhcC-CCeEEEEcCCHHHHHHHHHHHHhc-----CCCeEEEecCHHHhhcccCCCceEEE
Confidence 356799999999999999998764 458999999999999999987643 36899999999987554446789999
Q ss_pred EEcCCCCCCCCCCCC-cHHHHHHHHHhcCCCcEEEEe
Q 037807 147 IIDAFDPIRPGHDLF-EGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 147 i~D~~~~~~~~~~l~-t~ef~~~~~~~LkpgGvlv~~ 182 (299)
++|......+..... ...+++.++++|||||+|++.
T Consensus 133 ~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~ 169 (236)
T 1zx0_A 133 LYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp EECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred EECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEE
Confidence 996433211111111 135789999999999999864
No 36
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.49 E-value=4.7e-13 Score=117.23 Aligned_cols=106 Identities=25% Similarity=0.327 Sum_probs=86.4
Q ss_pred CCCeEEEEeccccHHHHHHHhcCC-ccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcC--C--CC
Q 037807 68 NPKKVLLIGGGDGGILREISRHAS-VEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQ--S--GT 142 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~--~--~~ 142 (299)
++++||+||||+|..+..+++..+ ..+|+++|+++.+++.|++++...+ + .++++++.+|+.+.+...+ + ++
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g--~-~~~i~~~~~d~~~~l~~l~~~~~~~~ 148 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAG--V-AEKISLRLGPALATLEQLTQGKPLPE 148 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT--C-GGGEEEEESCHHHHHHHHHTSSSCCC
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--C-CCcEEEEEcCHHHHHHHHHhcCCCCC
Confidence 578999999999999999998532 4689999999999999999886542 1 3589999999988776532 2 78
Q ss_pred ccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 143 FDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 143 fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
||+|++|...+ ...++++.+.+.|+|||++++..
T Consensus 149 fD~V~~d~~~~-------~~~~~l~~~~~~LkpgG~lv~~~ 182 (232)
T 3cbg_A 149 FDLIFIDADKR-------NYPRYYEIGLNLLRRGGLMVIDN 182 (232)
T ss_dssp EEEEEECSCGG-------GHHHHHHHHHHTEEEEEEEEEEC
T ss_pred cCEEEECCCHH-------HHHHHHHHHHHHcCCCeEEEEeC
Confidence 99999986522 12778999999999999999853
No 37
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.48 E-value=2.8e-13 Score=117.54 Aligned_cols=106 Identities=22% Similarity=0.337 Sum_probs=86.6
Q ss_pred CCCCeEEEEeccccHHHHHHHhc-CCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCC----C
Q 037807 67 PNPKKVLLIGGGDGGILREISRH-ASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQS----G 141 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~----~ 141 (299)
.++++||+||||+|..+..+++. ++..+|+++|+++.+++.|++++...+ . .++++++.+|+.+.+..... +
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g--~-~~~i~~~~~d~~~~~~~~~~~~~~~ 144 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAE--A-EHKIDLRLKPALETLDELLAAGEAG 144 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTT--C-TTTEEEEESCHHHHHHHHHHTTCTT
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCC--C-CCeEEEEEcCHHHHHHHHHhcCCCC
Confidence 35789999999999999999985 335799999999999999999987542 1 36899999999887654311 6
Q ss_pred CccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 142 TFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 142 ~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
+||+|++|.... ....+++.+.+.|+|||++++.
T Consensus 145 ~~D~v~~d~~~~-------~~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 145 TFDVAVVDADKE-------NCSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp CEEEEEECSCST-------THHHHHHHHHHHEEEEEEEEEE
T ss_pred CccEEEECCCHH-------HHHHHHHHHHHHcCCCeEEEEE
Confidence 899999986522 1268999999999999999984
No 38
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.48 E-value=5.4e-13 Score=114.74 Aligned_cols=117 Identities=16% Similarity=0.103 Sum_probs=90.7
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.+..+|||||||+|.++.++++. ..+|++||+++++++.|++++...+. ..+++++.+|+.+.+.. ...||+|
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g~---~~~v~~~~~d~~~~~~~--~~~~D~v 126 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYGL---SPRMRAVQGTAPAALAD--LPLPEAV 126 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC---TTTEEEEESCTTGGGTT--SCCCSEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCC---CCCEEEEeCchhhhccc--CCCCCEE
Confidence 45689999999999999999988 46899999999999999998765421 23899999999886653 3579999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhhh
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHRI 203 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~~ 203 (299)
+++... ..++++.+.+.|+|||.+++.... .+....+.+.+++.
T Consensus 127 ~~~~~~---------~~~~l~~~~~~LkpgG~lv~~~~~----~~~~~~~~~~l~~~ 170 (204)
T 3njr_A 127 FIGGGG---------SQALYDRLWEWLAPGTRIVANAVT----LESETLLTQLHARH 170 (204)
T ss_dssp EECSCC---------CHHHHHHHHHHSCTTCEEEEEECS----HHHHHHHHHHHHHH
T ss_pred EECCcc---------cHHHHHHHHHhcCCCcEEEEEecC----cccHHHHHHHHHhC
Confidence 987522 133999999999999999986533 33445555555543
No 39
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.48 E-value=1.6e-13 Score=118.96 Aligned_cols=108 Identities=15% Similarity=0.206 Sum_probs=84.8
Q ss_pred CCCeEEEEeccccHHHHHHHhc-CCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCC----CC
Q 037807 68 NPKKVLLIGGGDGGILREISRH-ASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQS----GT 142 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~----~~ 142 (299)
++++|||||||+|..+..+++. ++..+|++||+++.+++.|++++...+. .++++++.+|+.+++..... ++
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~l~~~~~~~~~~~ 134 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGL---QDKVTILNGASQDLIPQLKKKYDVDT 134 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC---GGGEEEEESCHHHHGGGTTTTSCCCC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCC---CCceEEEECCHHHHHHHHHHhcCCCc
Confidence 5789999999999999999984 3357899999999999999999876521 35799999999998876522 68
Q ss_pred ccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 143 FDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 143 fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
||+|++|....... -..++++.+ +.|+|||++++..
T Consensus 135 fD~V~~d~~~~~~~----~~~~~~~~~-~~LkpgG~lv~~~ 170 (221)
T 3u81_A 135 LDMVFLDHWKDRYL----PDTLLLEKC-GLLRKGTVLLADN 170 (221)
T ss_dssp CSEEEECSCGGGHH----HHHHHHHHT-TCCCTTCEEEESC
T ss_pred eEEEEEcCCcccch----HHHHHHHhc-cccCCCeEEEEeC
Confidence 99999986432110 013566666 9999999999854
No 40
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.48 E-value=9.5e-14 Score=124.29 Aligned_cols=109 Identities=12% Similarity=0.143 Sum_probs=83.2
Q ss_pred CCCCCeEEEEeccccHHHHHHHhcC--CccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCc
Q 037807 66 IPNPKKVLLIGGGDGGILREISRHA--SVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTF 143 (299)
Q Consensus 66 ~~~~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~f 143 (299)
.++..+|||||||+|..+..++++. +..+|++||+++.|++.||+++...+ ...+++++.+|+.++ +.+.|
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~---~~~~v~~~~~D~~~~----~~~~~ 140 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYK---APTPVDVIEGDIRDI----AIENA 140 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSC---CSSCEEEEESCTTTC----CCCSE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhc---cCceEEEeecccccc----ccccc
Confidence 3567899999999999999998753 24589999999999999999876532 245899999998664 34679
Q ss_pred cEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 144 DAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 144 DvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
|+|++...-..-+.. -...+++.+++.|||||+|++..
T Consensus 141 d~v~~~~~l~~~~~~--~~~~~l~~i~~~LkpGG~lii~e 178 (261)
T 4gek_A 141 SMVVLNFTLQFLEPS--ERQALLDKIYQGLNPGGALVLSE 178 (261)
T ss_dssp EEEEEESCGGGSCHH--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccceeeeeeeecCch--hHhHHHHHHHHHcCCCcEEEEEe
Confidence 999986543221110 01468999999999999998853
No 41
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.48 E-value=2.8e-13 Score=119.35 Aligned_cols=130 Identities=15% Similarity=0.111 Sum_probs=93.7
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhc--CCCCCCEEEEEccHHHHHHh-cCCCCcc
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAI--GYEDSRVILHVCDGSEYLKT-VQSGTFD 144 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~--~~~~~rv~v~~~D~~~~l~~-~~~~~fD 144 (299)
+..+|||||||+|.++..+++..+...|++||+++.+++.|++.+..... ....++++++.+|+.+++.. .++++||
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D 125 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLT 125 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEE
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCee
Confidence 45689999999999999999865567899999999999999987653210 01236899999999875542 2367899
Q ss_pred EEEEcCCCCCCC----CCCCCcHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHh
Q 037807 145 AIIIDAFDPIRP----GHDLFEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCH 201 (299)
Q Consensus 145 vIi~D~~~~~~~----~~~l~t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~ 201 (299)
.|++..++|+.. ...+....+++.+.++|+|||.|++.+.. ......+.+.+.
T Consensus 126 ~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~----~~~~~~~~~~l~ 182 (235)
T 3ckk_A 126 KMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV----LELHDWMCTHFE 182 (235)
T ss_dssp EEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESC----HHHHHHHHHHHH
T ss_pred EEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC----HHHHHHHHHHHH
Confidence 999988776522 22344578999999999999999986543 233444445444
No 42
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.47 E-value=2.9e-13 Score=122.91 Aligned_cols=105 Identities=12% Similarity=0.185 Sum_probs=83.5
Q ss_pred cCCCCCCeEEEEeccccHHH-HHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCC
Q 037807 64 CSIPNPKKVLLIGGGDGGIL-REISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGT 142 (299)
Q Consensus 64 ~~~~~~~~VL~IG~G~G~~~-~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~ 142 (299)
...+++.+||+||||+|..+ ..+++.+ ..+|++||+|+++++.|++++...+ + .+++++.+|+.++. ++.
T Consensus 118 a~l~~g~rVLDIGcG~G~~ta~~lA~~~-ga~V~gIDis~~~l~~Ar~~~~~~g--l--~~v~~v~gDa~~l~----d~~ 188 (298)
T 3fpf_A 118 GRFRRGERAVFIGGGPLPLTGILLSHVY-GMRVNVVEIEPDIAELSRKVIEGLG--V--DGVNVITGDETVID----GLE 188 (298)
T ss_dssp TTCCTTCEEEEECCCSSCHHHHHHHHTT-CCEEEEEESSHHHHHHHHHHHHHHT--C--CSEEEEESCGGGGG----GCC
T ss_pred cCCCCcCEEEEECCCccHHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHhcC--C--CCeEEEECchhhCC----CCC
Confidence 34467899999999988755 4455554 4689999999999999999987652 2 68999999998852 478
Q ss_pred ccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecC
Q 037807 143 FDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAE 184 (299)
Q Consensus 143 fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~ 184 (299)
||+|+++...+ . ..++++.+.+.|||||++++...
T Consensus 189 FDvV~~~a~~~---d----~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 189 FDVLMVAALAE---P----KRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp CSEEEECTTCS---C----HHHHHHHHHHHCCTTCEEEEEEC
T ss_pred cCEEEECCCcc---C----HHHHHHHHHHHcCCCcEEEEEcC
Confidence 99999875421 1 26899999999999999998753
No 43
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.47 E-value=6.4e-14 Score=120.16 Aligned_cols=109 Identities=17% Similarity=0.251 Sum_probs=84.6
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCC-ccEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGT-FDAI 146 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~-fDvI 146 (299)
+..+|||+|||+|.++.++++.. ..+|++||+|+.+++.|++++...+ +..++++++.+|+.+++....+++ ||+|
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~~~fD~I 129 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQ-AKKVTFLELDKTVANQLKKNLQTLK--CSSEQAEVINQSSLDFLKQPQNQPHFDVV 129 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTT--CCTTTEEEECSCHHHHTTSCCSSCCEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHHhC--CCccceEEEECCHHHHHHhhccCCCCCEE
Confidence 46799999999999999977763 4689999999999999999987642 112589999999998875422467 9999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHH--HHhcCCCcEEEEecC
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELV--AKALRPGGAMCIQAE 184 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~--~~~LkpgGvlv~~~~ 184 (299)
++|.+.... ...++++.+ .+.|+|||++++...
T Consensus 130 ~~~~~~~~~-----~~~~~l~~~~~~~~LkpgG~l~i~~~ 164 (201)
T 2ift_A 130 FLDPPFHFN-----LAEQAISLLCENNWLKPNALIYVETE 164 (201)
T ss_dssp EECCCSSSC-----HHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred EECCCCCCc-----cHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 998762211 125678888 567999999998653
No 44
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.47 E-value=5.4e-13 Score=110.81 Aligned_cols=104 Identities=20% Similarity=0.176 Sum_probs=83.7
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.+..+|||||||+|..+..+++..+..+|+++|+++.+++.|++++...+. ..++ ++.+|+.+.+... .++||+|
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~~-~~~~d~~~~~~~~-~~~~D~i 98 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGV---SDRI-AVQQGAPRAFDDV-PDNPDVI 98 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTC---TTSE-EEECCTTGGGGGC-CSCCSEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCC---CCCE-EEecchHhhhhcc-CCCCCEE
Confidence 356799999999999999999875568999999999999999998765421 2378 8889987766542 3789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
+++..... ..+++.+.+.|+|||.+++..
T Consensus 99 ~~~~~~~~--------~~~l~~~~~~L~~gG~l~~~~ 127 (178)
T 3hm2_A 99 FIGGGLTA--------PGVFAAAWKRLPVGGRLVANA 127 (178)
T ss_dssp EECC-TTC--------TTHHHHHHHTCCTTCEEEEEE
T ss_pred EECCcccH--------HHHHHHHHHhcCCCCEEEEEe
Confidence 98654432 568999999999999999865
No 45
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.47 E-value=6.6e-13 Score=111.45 Aligned_cols=110 Identities=11% Similarity=0.065 Sum_probs=81.8
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
++..+|||||||+|..+..+++. ..+|++||+|+.+++.|++++...+ -++++++.+|....... .+++||+|
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~----~~~v~~~~~~~~~l~~~-~~~~fD~v 93 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLG----IENTELILDGHENLDHY-VREPIRAA 93 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHT----CCCEEEEESCGGGGGGT-CCSCEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcC----CCcEEEEeCcHHHHHhh-ccCCcCEE
Confidence 45689999999999999999987 4789999999999999999987652 26899999777654322 26789999
Q ss_pred EEcCCC-CCCCCCCC----CcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFD-PIRPGHDL----FEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~-~~~~~~~l----~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
+++... +....... -...+++.+.+.|||||.+++..
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 135 (185)
T 3mti_A 94 IFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMI 135 (185)
T ss_dssp EEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEE
Confidence 988422 21111111 12467899999999999998754
No 46
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.47 E-value=7.5e-13 Score=122.47 Aligned_cols=127 Identities=16% Similarity=0.166 Sum_probs=93.0
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhc--CCCCccE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTV--QSGTFDA 145 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~--~~~~fDv 145 (299)
+..+|||+|||+|.++..+++.. . +|++||+|+.+++.|++++...+ +++.+++++.+|+.+++... ..++||+
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~g-a-~V~~VD~s~~al~~a~~n~~~~g--l~~~~v~~i~~D~~~~l~~~~~~~~~fD~ 228 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAG-A-EVTHVDASKKAIGWAKENQVLAG--LEQAPIRWICEDAMKFIQREERRGSTYDI 228 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTT-C-EEEEECSCHHHHHHHHHHHHHHT--CTTSCEEEECSCHHHHHHHHHHHTCCBSE
T ss_pred CCCcEEEcccccCHHHHHHHHcC-C-EEEEEECCHHHHHHHHHHHHHcC--CCccceEEEECcHHHHHHHHHhcCCCceE
Confidence 46799999999999999999864 3 89999999999999999987652 23336999999999987642 1468999
Q ss_pred EEEcCCCC-CCCCCCCC-----cHHHHHHHHHhcCCCcEEEEec-CCcccchHHHHHHHH
Q 037807 146 IIIDAFDP-IRPGHDLF-----EGPFFELVAKALRPGGAMCIQA-ESLWFQQFSVQHLID 198 (299)
Q Consensus 146 Ii~D~~~~-~~~~~~l~-----t~ef~~~~~~~LkpgGvlv~~~-~s~~~~~~~~~~~~~ 198 (299)
|++|++.- ..+...++ ..++++.+.+.|+|||++++.. .+.....+.+..+++
T Consensus 229 Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~ 288 (332)
T 2igt_A 229 ILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMR 288 (332)
T ss_dssp EEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHH
T ss_pred EEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHH
Confidence 99997631 11111111 2578899999999999966544 333334455555554
No 47
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.47 E-value=5.7e-13 Score=118.45 Aligned_cols=126 Identities=14% Similarity=0.105 Sum_probs=93.0
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAII 147 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi 147 (299)
+..+|||||||+|..+..+++... .+|++||+|+.+++.|++++...+ + ..+++++.+|+.++....+.++||+|+
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~-~~v~gvDi~~~~~~~a~~n~~~~~--~-~~~v~~~~~D~~~~~~~~~~~~fD~Ii 124 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTK-AKIVGVEIQERLADMAKRSVAYNQ--L-EDQIEIIEYDLKKITDLIPKERADIVT 124 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCC-CEEEEECCSHHHHHHHHHHHHHTT--C-TTTEEEECSCGGGGGGTSCTTCEEEEE
T ss_pred CCCEEEEcCCchhHHHHHHHHhcC-CcEEEEECCHHHHHHHHHHHHHCC--C-cccEEEEECcHHHhhhhhccCCccEEE
Confidence 578999999999999999998754 389999999999999999987642 1 357999999999887544357899999
Q ss_pred EcCCCCCC----C-CC----C-------CCcHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhh
Q 037807 148 IDAFDPIR----P-GH----D-------LFEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHR 202 (299)
Q Consensus 148 ~D~~~~~~----~-~~----~-------l~t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~ 202 (299)
+|++.... . .. . ....++++.+.+.|+|||.+++-. .......+...+++
T Consensus 125 ~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~-----~~~~~~~~~~~l~~ 190 (259)
T 3lpm_A 125 CNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVH-----RPERLLDIIDIMRK 190 (259)
T ss_dssp ECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEE-----CTTTHHHHHHHHHH
T ss_pred ECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEE-----cHHHHHHHHHHHHH
Confidence 98754211 0 00 0 012468999999999999999832 22334455566654
No 48
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.46 E-value=3.6e-13 Score=118.20 Aligned_cols=106 Identities=21% Similarity=0.360 Sum_probs=85.4
Q ss_pred CCCeEEEEeccccHHHHHHHhcCC-ccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcC-------
Q 037807 68 NPKKVLLIGGGDGGILREISRHAS-VEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQ------- 139 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~------- 139 (299)
++.+|||||||+|..+..+++..+ ..+|++||+|+.+++.|++++...+ . ..+++++.+|+.+++....
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g--~-~~~v~~~~~d~~~~~~~~~~~~~~~~ 136 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENG--L-ENKIFLKLGSALETLQVLIDSKSAPS 136 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT--C-GGGEEEEESCHHHHHHHHHHCSSCCG
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--C-CCCEEEEECCHHHHHHHHHhhccccc
Confidence 578999999999999999998633 5789999999999999999886542 1 3469999999988765321
Q ss_pred -------C-CCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 140 -------S-GTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 140 -------~-~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
+ ++||+|+++...+ ....+++.+.+.|+|||++++..
T Consensus 137 ~~~~f~~~~~~fD~I~~~~~~~-------~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 137 WASDFAFGPSSIDLFFLDADKE-------NYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp GGTTTCCSTTCEEEEEECSCGG-------GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccccccCCCCCcCEEEEeCCHH-------HHHHHHHHHHHHcCCCeEEEEEc
Confidence 1 6899999985322 12578999999999999999864
No 49
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.46 E-value=1.5e-13 Score=117.83 Aligned_cols=105 Identities=10% Similarity=0.087 Sum_probs=83.9
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAII 147 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi 147 (299)
+..+|||+|||+|.++.++++.. ..+|++||+|+.+++.|++++...+ -++++++.+|+.+++... .++||+|+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~-~~~V~~vD~s~~~l~~a~~~~~~~~----~~~v~~~~~D~~~~~~~~-~~~fD~V~ 127 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY-AAGATLIEMDRAVSQQLIKNLATLK----AGNARVVNSNAMSFLAQK-GTPHNIVF 127 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTT----CCSEEEECSCHHHHHSSC-CCCEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC-CCEEEEEECCHHHHHHHHHHHHHcC----CCcEEEEECCHHHHHhhc-CCCCCEEE
Confidence 45799999999999999977763 4689999999999999999987642 258999999999987643 57899999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHH--hcCCCcEEEEec
Q 037807 148 IDAFDPIRPGHDLFEGPFFELVAK--ALRPGGAMCIQA 183 (299)
Q Consensus 148 ~D~~~~~~~~~~l~t~ef~~~~~~--~LkpgGvlv~~~ 183 (299)
+|.+.... ...++++.+.+ .|+|||++++..
T Consensus 128 ~~~p~~~~-----~~~~~l~~l~~~~~L~pgG~l~i~~ 160 (202)
T 2fpo_A 128 VDPPFRRG-----LLEETINLLEDNGWLADEALIYVES 160 (202)
T ss_dssp ECCSSSTT-----THHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred ECCCCCCC-----cHHHHHHHHHhcCccCCCcEEEEEE
Confidence 98762211 12567788866 499999999865
No 50
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.46 E-value=8.8e-14 Score=116.53 Aligned_cols=109 Identities=15% Similarity=0.158 Sum_probs=85.2
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhc--CCCCccE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTV--QSGTFDA 145 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~--~~~~fDv 145 (299)
+..+|||+|||+|..+.++++.+ ..+|++||+|+.+++.|++++...+. .++++++.+|+.+++... ..++||+
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~fD~ 119 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVSRG-MDKSICIEKNFAALKVIKENIAITKE---PEKFEVRKMDANRALEQFYEEKLQFDL 119 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHTC---GGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEeCCccCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHhCC---CcceEEEECcHHHHHHHHHhcCCCCCE
Confidence 56799999999999999988864 56899999999999999998876421 258999999999876532 1578999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHH--HHhcCCCcEEEEecCC
Q 037807 146 IIIDAFDPIRPGHDLFEGPFFELV--AKALRPGGAMCIQAES 185 (299)
Q Consensus 146 Ii~D~~~~~~~~~~l~t~ef~~~~--~~~LkpgGvlv~~~~s 185 (299)
|++|.+.... ...++++.+ .+.|+|||++++...+
T Consensus 120 i~~~~~~~~~-----~~~~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 120 VLLDPPYAKQ-----EIVSQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp EEECCCGGGC-----CHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred EEECCCCCch-----hHHHHHHHHHHhcccCCCCEEEEEeCC
Confidence 9998652111 125677777 7889999999986533
No 51
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.46 E-value=3.4e-13 Score=119.08 Aligned_cols=118 Identities=21% Similarity=0.252 Sum_probs=93.5
Q ss_pred CCCCeEEEEeccccHHHHHHHhc-CCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccE
Q 037807 67 PNPKKVLLIGGGDGGILREISRH-ASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDA 145 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDv 145 (299)
.+..+|||+|||+|..+..+++. .+..+|+++|+++.+++.|++++...+. ..+++++.+|+.+.+. +++||+
T Consensus 92 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~~---~~~~D~ 165 (255)
T 3mb5_A 92 SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGF---DDRVTIKLKDIYEGIE---EENVDH 165 (255)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTC---TTTEEEECSCGGGCCC---CCSEEE
T ss_pred CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCC---CCceEEEECchhhccC---CCCcCE
Confidence 45689999999999999999987 5567999999999999999999876521 3469999999986542 568999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhhh
Q 037807 146 IIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHRI 203 (299)
Q Consensus 146 Ii~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~~ 203 (299)
|++|.+++ .++++.+.+.|+|||.+++...+ .+....+.+.+++.
T Consensus 166 v~~~~~~~---------~~~l~~~~~~L~~gG~l~~~~~~----~~~~~~~~~~l~~~ 210 (255)
T 3mb5_A 166 VILDLPQP---------ERVVEHAAKALKPGGFFVAYTPC----SNQVMRLHEKLREF 210 (255)
T ss_dssp EEECSSCG---------GGGHHHHHHHEEEEEEEEEEESS----HHHHHHHHHHHHHT
T ss_pred EEECCCCH---------HHHHHHHHHHcCCCCEEEEEECC----HHHHHHHHHHHHHc
Confidence 99987765 56899999999999999986532 23344555555544
No 52
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.46 E-value=1.2e-13 Score=117.73 Aligned_cols=151 Identities=17% Similarity=0.139 Sum_probs=86.9
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHh--cCCCCcc
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKT--VQSGTFD 144 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~--~~~~~fD 144 (299)
.++.+|||+|||+|..+..+++..+..+++++|+|+.+++.|++++... ..+++++.+|+.+.+.. ...++||
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~~fD 103 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERF-----GAVVDWAAADGIEWLIERAERGRPWH 103 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC------------------------CCHHHHHHHHHHHHHTTCCBS
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHh-----CCceEEEEcchHhhhhhhhhccCccc
Confidence 4678999999999999999998755578999999999999999988654 12789999999987653 1137899
Q ss_pred EEEEcCCCCCCCC-----CC---------CC--------cHHHHHHHHHhcCCCcE-EEEecCCcccchHHHHHHHHHHh
Q 037807 145 AIIIDAFDPIRPG-----HD---------LF--------EGPFFELVAKALRPGGA-MCIQAESLWFQQFSVQHLIDDCH 201 (299)
Q Consensus 145 vIi~D~~~~~~~~-----~~---------l~--------t~ef~~~~~~~LkpgGv-lv~~~~s~~~~~~~~~~~~~~l~ 201 (299)
+|++|.+...... .. +. ...+++.+.+.|+|||. +++... ....+.+..+++.++
T Consensus 104 ~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~--~~~~~~~~~~l~~~~ 181 (215)
T 4dzr_A 104 AIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG--HNQADEVARLFAPWR 181 (215)
T ss_dssp EEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT--TSCHHHHHHHTGGGG
T ss_pred EEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC--CccHHHHHHHHHHhh
Confidence 9999865421110 00 00 06788888999999999 666442 333344444444333
Q ss_pred hhcCCceeeeEEeecccCCcceeEEeccc
Q 037807 202 RIFKGSASYAWTTVPTYPSGVIGFMLCST 230 (299)
Q Consensus 202 ~~F~~~v~~~~~~vP~~~~g~w~~~~ask 230 (299)
..| ..+. ..+.+. |...++++.+
T Consensus 182 ~gf-~~~~----~~~~~~-~~~r~~~~~~ 204 (215)
T 4dzr_A 182 ERG-FRVR----KVKDLR-GIDRVIAVTR 204 (215)
T ss_dssp GGT-EECC----EEECTT-SCEEEEEEEE
T ss_pred cCC-ceEE----EEEecC-CCEEEEEEEE
Confidence 445 2221 233343 4456777776
No 53
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.45 E-value=5.1e-13 Score=120.39 Aligned_cols=122 Identities=11% Similarity=0.074 Sum_probs=94.3
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
++..+|||+|||+|.++..+++... .+|++||+|+.+++.|++++..++. ..+++++.+|+.++.. .++||+|
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~-~~V~~vD~s~~~~~~a~~n~~~n~~---~~~v~~~~~D~~~~~~---~~~fD~V 196 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGK-AKVIAIEKDPYTFKFLVENIHLNKV---EDRMSAYNMDNRDFPG---ENIADRI 196 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTC-CEEEEECCCHHHHHHHHHHHHHTTC---TTTEEEECSCTTTCCC---CSCEEEE
T ss_pred CCCCEEEEecccCCHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHHcCC---CceEEEEECCHHHhcc---cCCccEE
Confidence 3578999999999999999998753 3799999999999999999876521 3469999999988765 5789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCCc--ccchHHHHHHHHHHhhh
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAESL--WFQQFSVQHLIDDCHRI 203 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s~--~~~~~~~~~~~~~l~~~ 203 (299)
++|.+.. ..++++.+.+.|+|||++++...++ ....+.+..+.+.+++.
T Consensus 197 i~~~p~~--------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 247 (278)
T 2frn_A 197 LMGYVVR--------THEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEY 247 (278)
T ss_dssp EECCCSS--------GGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHT
T ss_pred EECCchh--------HHHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHc
Confidence 9986532 2678999999999999999866443 12233455555555543
No 54
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.45 E-value=9.9e-14 Score=115.72 Aligned_cols=109 Identities=16% Similarity=0.173 Sum_probs=86.4
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.+..+|||+|||+|..+..+++. +..+|++||+|+.+++.|++++...+ + .++++++.+|+.+++... .++||+|
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~--~-~~~~~~~~~d~~~~~~~~-~~~fD~i 104 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTK--A-ENRFTLLKMEAERAIDCL-TGRFDLV 104 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTT--C-GGGEEEECSCHHHHHHHB-CSCEEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcC--C-CCceEEEECcHHHhHHhh-cCCCCEE
Confidence 35689999999999999999987 45789999999999999999886541 1 247999999999987654 5679999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHH--HhcCCCcEEEEecCC
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVA--KALRPGGAMCIQAES 185 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~--~~LkpgGvlv~~~~s 185 (299)
++|.+... ....++++.+. +.|+|||++++....
T Consensus 105 ~~~~~~~~-----~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 105 FLDPPYAK-----ETIVATIEALAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp EECCSSHH-----HHHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred EECCCCCc-----chHHHHHHHHHhCCCcCCCcEEEEEECC
Confidence 99854210 01256777777 899999999986633
No 55
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.45 E-value=7.8e-14 Score=124.61 Aligned_cols=98 Identities=17% Similarity=0.211 Sum_probs=79.3
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
+...+|||||||+|..++.++++. .+|++||+|+.|++.|++ .++++++.+|+.+.- .++++||+|
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~~~--~~v~gvD~s~~ml~~a~~----------~~~v~~~~~~~e~~~--~~~~sfD~v 103 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAEFF--ERVHAVDPGEAQIRQALR----------HPRVTYAVAPAEDTG--LPPASVDVA 103 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHTTC--SEEEEEESCHHHHHTCCC----------CTTEEEEECCTTCCC--CCSSCEEEE
T ss_pred CCCCCEEEEcCCCCHHHHHHHHhC--CEEEEEeCcHHhhhhhhh----------cCCceeehhhhhhhc--ccCCcccEE
Confidence 456799999999999999999875 589999999999987654 368999999986642 236899999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++...-+... ...++++++|+|||||+|++..
T Consensus 104 ~~~~~~h~~~-----~~~~~~e~~rvLkpgG~l~~~~ 135 (257)
T 4hg2_A 104 IAAQAMHWFD-----LDRFWAELRRVARPGAVFAAVT 135 (257)
T ss_dssp EECSCCTTCC-----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEeeehhHhh-----HHHHHHHHHHHcCCCCEEEEEE
Confidence 9854433221 3679999999999999998754
No 56
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.44 E-value=1.6e-12 Score=115.43 Aligned_cols=148 Identities=11% Similarity=0.045 Sum_probs=103.4
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHh-cCCCCccE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKT-VQSGTFDA 145 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~~fDv 145 (299)
+.+.+|||||||+|..+..+++..+..+|++||+++.+++.++++....+ -.+++++.+|+.++... ...++||+
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----l~~v~~~~~d~~~~~~~~~~~~~fD~ 154 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLG----LKGARALWGRAEVLAREAGHREAYAR 154 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHT----CSSEEEEECCHHHHTTSTTTTTCEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhC----CCceEEEECcHHHhhcccccCCCceE
Confidence 35789999999999999999876556789999999999999999987652 24699999999887542 11478999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhhh-cCCceeeeEEeecccCCccee
Q 037807 146 IIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHRI-FKGSASYAWTTVPTYPSGVIG 224 (299)
Q Consensus 146 Ii~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~~-F~~~v~~~~~~vP~~~~g~w~ 224 (299)
|++....+ ...+++.+.+.|+|||.+++..+... .+.+..+.+.++.. | .........+|... +...
T Consensus 155 I~s~a~~~--------~~~ll~~~~~~LkpgG~l~~~~g~~~--~~e~~~~~~~l~~~G~-~~~~~~~~~~p~~~-~~R~ 222 (249)
T 3g89_A 155 AVARAVAP--------LCVLSELLLPFLEVGGAAVAMKGPRV--EEELAPLPPALERLGG-RLGEVLALQLPLSG-EARH 222 (249)
T ss_dssp EEEESSCC--------HHHHHHHHGGGEEEEEEEEEEECSCC--HHHHTTHHHHHHHHTE-EEEEEEEEECTTTC-CEEE
T ss_pred EEECCcCC--------HHHHHHHHHHHcCCCeEEEEEeCCCc--HHHHHHHHHHHHHcCC-eEEEEEEeeCCCCC-CcEE
Confidence 99976432 26789999999999999887554322 23334444444332 3 22222233556432 4455
Q ss_pred EEeccc
Q 037807 225 FMLCST 230 (299)
Q Consensus 225 ~~~ask 230 (299)
.++..|
T Consensus 223 l~~~~k 228 (249)
T 3g89_A 223 LVVLEK 228 (249)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 566565
No 57
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.44 E-value=2.9e-12 Score=120.80 Aligned_cols=130 Identities=15% Similarity=0.106 Sum_probs=95.9
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhc--CCCCcc
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTV--QSGTFD 144 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~--~~~~fD 144 (299)
...++|||+|||+|.++..+++. +..+|++||+++.+++.|++++..++ +++.+++++.+|+.+++... ..++||
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~-ga~~V~~vD~s~~al~~A~~N~~~n~--~~~~~v~~~~~D~~~~l~~~~~~~~~fD 287 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMG-GAMATTSVDLAKRSRALSLAHFEANH--LDMANHQLVVMDVFDYFKYARRHHLTYD 287 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHT-TBSEEEEEESCTTHHHHHHHHHHHTT--CCCTTEEEEESCHHHHHHHHHHTTCCEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcC--CCccceEEEECCHHHHHHHHHHhCCCcc
Confidence 35679999999999999999986 35689999999999999999987652 22238999999999987643 145899
Q ss_pred EEEEcCCCCCCCCCCCC-----cHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHH
Q 037807 145 AIIIDAFDPIRPGHDLF-----EGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDD 199 (299)
Q Consensus 145 vIi~D~~~~~~~~~~l~-----t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~ 199 (299)
+|++|++.......... -.++++.+.+.|+|||++++.+.+.....+.+..+++.
T Consensus 288 ~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~i~~ 347 (385)
T 2b78_A 288 IIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIEK 347 (385)
T ss_dssp EEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHH
T ss_pred EEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHH
Confidence 99999866311101111 13466777899999999999876666555555554443
No 58
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.43 E-value=3.9e-13 Score=110.81 Aligned_cols=104 Identities=13% Similarity=0.108 Sum_probs=83.1
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcC--CCCccE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQ--SGTFDA 145 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~--~~~fDv 145 (299)
+..+|||+|||+|..+..++++.. +|++||+|+.+++.|++++...+ . +++++.+|+.+++.... .++||+
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~~~----~-~~~~~~~d~~~~~~~~~~~~~~~D~ 113 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGW--EAVLVEKDPEAVRLLKENVRRTG----L-GARVVALPVEVFLPEAKAQGERFTV 113 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTC--EEEEECCCHHHHHHHHHHHHHHT----C-CCEEECSCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHHcC----C-ceEEEeccHHHHHHhhhccCCceEE
Confidence 567999999999999999998742 39999999999999999987651 2 89999999998765331 348999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHH--HhcCCCcEEEEecC
Q 037807 146 IIIDAFDPIRPGHDLFEGPFFELVA--KALRPGGAMCIQAE 184 (299)
Q Consensus 146 Ii~D~~~~~~~~~~l~t~ef~~~~~--~~LkpgGvlv~~~~ 184 (299)
|+++.+.. . ...++++.+. +.|+|||++++...
T Consensus 114 i~~~~~~~-~-----~~~~~~~~~~~~~~L~~gG~~~~~~~ 148 (171)
T 1ws6_A 114 AFMAPPYA-M-----DLAALFGELLASGLVEAGGLYVLQHP 148 (171)
T ss_dssp EEECCCTT-S-----CTTHHHHHHHHHTCEEEEEEEEEEEE
T ss_pred EEECCCCc-h-----hHHHHHHHHHhhcccCCCcEEEEEeC
Confidence 99986533 1 1256777777 99999999998653
No 59
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.42 E-value=4.2e-13 Score=116.52 Aligned_cols=127 Identities=18% Similarity=0.194 Sum_probs=91.8
Q ss_pred CCCCeEEEEecc-ccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccE
Q 037807 67 PNPKKVLLIGGG-DGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDA 145 (299)
Q Consensus 67 ~~~~~VL~IG~G-~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDv 145 (299)
++..+|||+||| +|.++..+++.. ..+|+++|+|+.+++.|++++... ..+++++.+|+..+.. .++++||+
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~-----~~~v~~~~~d~~~~~~-~~~~~fD~ 126 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERN-----NSNVRLVKSNGGIIKG-VVEGTFDV 126 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHT-----TCCCEEEECSSCSSTT-TCCSCEEE
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHh-----CCCcEEEeCCchhhhh-cccCceeE
Confidence 467899999999 999999999874 468999999999999999998764 2289999999743322 22578999
Q ss_pred EEEcCCCCCCCC---------------CCCCcHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhhh
Q 037807 146 IIIDAFDPIRPG---------------HDLFEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHRI 203 (299)
Q Consensus 146 Ii~D~~~~~~~~---------------~~l~t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~~ 203 (299)
|+++++...... .......+++.+.+.|+|||.+++...+. ......+.+.+++.
T Consensus 127 I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~---~~~~~~~~~~l~~~ 196 (230)
T 3evz_A 127 IFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDK---EKLLNVIKERGIKL 196 (230)
T ss_dssp EEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESC---HHHHHHHHHHHHHT
T ss_pred EEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEeccc---HhHHHHHHHHHHHc
Confidence 999865422111 00012678999999999999999854322 23445566666554
No 60
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.40 E-value=1.5e-12 Score=110.40 Aligned_cols=113 Identities=12% Similarity=0.067 Sum_probs=86.7
Q ss_pred CCCCeEEEEeccccHHHHHHHhc-CCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccE
Q 037807 67 PNPKKVLLIGGGDGGILREISRH-ASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDA 145 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDv 145 (299)
++..+|||+|||+|..+..+++. .+..+|++||+++.+++.|++++...+. .++++++.+|+.++.... +++||+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~~~~-~~~fD~ 96 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNL---IDRVTLIKDGHQNMDKYI-DCPVKA 96 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTC---GGGEEEECSCGGGGGGTC-CSCEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCCeEEEECCHHHHhhhc-cCCceE
Confidence 45679999999999999999986 2345899999999999999998875411 358999999988775433 578999
Q ss_pred EEEcCCC-CCCCCCCC----CcHHHHHHHHHhcCCCcEEEEec
Q 037807 146 IIIDAFD-PIRPGHDL----FEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 146 Ii~D~~~-~~~~~~~l----~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
|+++.+. |....... ...++++.+.+.|+|||.+++..
T Consensus 97 v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 139 (197)
T 3eey_A 97 VMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVI 139 (197)
T ss_dssp EEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEE
Confidence 9998644 21111111 12469999999999999998754
No 61
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.40 E-value=2.3e-12 Score=113.71 Aligned_cols=116 Identities=16% Similarity=0.196 Sum_probs=89.8
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCC----CCCCEEEEEccHHHHHHh-cCCCC
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGY----EDSRVILHVCDGSEYLKT-VQSGT 142 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~----~~~rv~v~~~D~~~~l~~-~~~~~ 142 (299)
+..+|||||||+|.++..+++..+..+|++||+++.+++.+++++....... .-++++++.+|+.+++.. ...+.
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 4578999999999999999987555689999999999999999876541100 125799999999886653 23578
Q ss_pred ccEEEEcCCCCCCC----CCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 143 FDAIIIDAFDPIRP----GHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 143 fDvIi~D~~~~~~~----~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
+|.|++..++|... ...+...++++.+.++|+|||+|++.+
T Consensus 129 ~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 129 LSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp EEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 99999887776421 123345799999999999999999855
No 62
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.40 E-value=1e-12 Score=112.36 Aligned_cols=105 Identities=13% Similarity=0.188 Sum_probs=83.3
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAII 147 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi 147 (299)
++.+|||||||+|..+..+++.+ ..+|+++|+++.+++.|++.+...+ -.++++++.+|+.+.. .++++||+|+
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~~D~s~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~~--~~~~~~D~v~ 116 (219)
T 3dlc_A 43 TAGTCIDIGSGPGALSIALAKQS-DFSIRALDFSKHMNEIALKNIADAN---LNDRIQIVQGDVHNIP--IEDNYADLIV 116 (219)
T ss_dssp CEEEEEEETCTTSHHHHHHHHHS-EEEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEECBTTBCS--SCTTCEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHcC-CCeEEEEECCHHHHHHHHHHHHhcc---ccCceEEEEcCHHHCC--CCcccccEEE
Confidence 34499999999999999999883 5689999999999999999876542 1458999999987632 2357899999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 148 IDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 148 ~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
+...-...+. ...+++.+++.|+|||.+++.
T Consensus 117 ~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~~~ 147 (219)
T 3dlc_A 117 SRGSVFFWED----VATAFREIYRILKSGGKTYIG 147 (219)
T ss_dssp EESCGGGCSC----HHHHHHHHHHHEEEEEEEEEE
T ss_pred ECchHhhccC----HHHHHHHHHHhCCCCCEEEEE
Confidence 8653221111 277999999999999999885
No 63
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.40 E-value=3.6e-12 Score=114.33 Aligned_cols=141 Identities=17% Similarity=0.204 Sum_probs=98.8
Q ss_pred cCCceEEEEcCeeeccCcch-hhHHHHHHhhcccCCCCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHh
Q 037807 32 SSYGKVFVLDGALQLTEKDE-CAYQEMITHLPLCSIPNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKE 110 (299)
Q Consensus 32 ~~~g~~l~ldg~~q~~~~de-~~Y~e~l~~~~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~ 110 (299)
..+|+.+.++..+....++. .....++..++ .++.+|||||||+|..+..+++..+..+|+++|+|+.+++.+++
T Consensus 76 ~f~~~~~~~~~~~~ipr~~te~l~~~~l~~~~----~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~ 151 (276)
T 2b3t_A 76 EFWSLPLFVSPATLIPRPDTECLVEQALARLP----EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQR 151 (276)
T ss_dssp EETTEEEECCTTSCCCCTTHHHHHHHHHHHSC----SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHH
T ss_pred EECCceEEeCCCCcccCchHHHHHHHHHHhcc----cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHH
Confidence 34566666665544443331 12222233222 35679999999999999999975456789999999999999999
Q ss_pred hchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEEEcCCCCCC-------------CCCCC--------CcHHHHHHH
Q 037807 111 YFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAIIIDAFDPIR-------------PGHDL--------FEGPFFELV 169 (299)
Q Consensus 111 ~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~-------------~~~~l--------~t~ef~~~~ 169 (299)
++...+ -++++++.+|+.+.+. .++||+|+++++.... |...+ ....+++.+
T Consensus 152 n~~~~~----~~~v~~~~~d~~~~~~---~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~ 224 (276)
T 2b3t_A 152 NAQHLA----IKNIHILQSDWFSALA---GQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQS 224 (276)
T ss_dssp HHHHHT----CCSEEEECCSTTGGGT---TCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHH
T ss_pred HHHHcC----CCceEEEEcchhhhcc---cCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHH
Confidence 987652 2479999999887543 4689999998654211 11112 125688899
Q ss_pred HHhcCCCcEEEEec
Q 037807 170 AKALRPGGAMCIQA 183 (299)
Q Consensus 170 ~~~LkpgGvlv~~~ 183 (299)
.+.|+|||.+++..
T Consensus 225 ~~~LkpgG~l~~~~ 238 (276)
T 2b3t_A 225 RNALVSGGFLLLEH 238 (276)
T ss_dssp GGGEEEEEEEEEEC
T ss_pred HHhcCCCCEEEEEE
Confidence 99999999999865
No 64
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.39 E-value=5.3e-12 Score=105.48 Aligned_cols=119 Identities=14% Similarity=0.188 Sum_probs=92.5
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.+..+|||+|||+|..+..+++.. .+|+++|+|+.+++.+++++...+ -.++++++.+|+.+.+.. .++||+|
T Consensus 32 ~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~~~~--~~~~D~v 104 (192)
T 1l3i_A 32 GKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHG---LGDNVTLMEGDAPEALCK--IPDIDIA 104 (192)
T ss_dssp CTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTT---CCTTEEEEESCHHHHHTT--SCCEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcC---CCcceEEEecCHHHhccc--CCCCCEE
Confidence 456899999999999999999875 789999999999999999876542 126899999999886553 2589999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhhh
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHRI 203 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~~ 203 (299)
+++.... ....+++.+.+.|+|||.+++...+ ......+.+.+++.
T Consensus 105 ~~~~~~~-------~~~~~l~~~~~~l~~gG~l~~~~~~----~~~~~~~~~~l~~~ 150 (192)
T 1l3i_A 105 VVGGSGG-------ELQEILRIIKDKLKPGGRIIVTAIL----LETKFEAMECLRDL 150 (192)
T ss_dssp EESCCTT-------CHHHHHHHHHHTEEEEEEEEEEECB----HHHHHHHHHHHHHT
T ss_pred EECCchH-------HHHHHHHHHHHhcCCCcEEEEEecC----cchHHHHHHHHHHC
Confidence 9875432 1278999999999999999985432 33445555666544
No 65
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.38 E-value=1.1e-12 Score=112.01 Aligned_cols=102 Identities=12% Similarity=0.095 Sum_probs=83.5
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAII 147 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi 147 (299)
+..+|||||||+|..+..+++..+..+++++|+++.+++.+++++... .-++++++.+|+.++. +.++||+|+
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~----~~~~v~~~~~d~~~~~---~~~~~D~i~ 137 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHEL----KLENIEPVQSRVEEFP---SEPPFDGVI 137 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHT----TCSSEEEEECCTTTSC---CCSCEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHc----CCCCeEEEecchhhCC---ccCCcCEEE
Confidence 367999999999999999998645578999999999999999987654 2245999999987754 246899999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecC
Q 037807 148 IDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAE 184 (299)
Q Consensus 148 ~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~ 184 (299)
+....+ ...+++.+.+.|+|||.+++..+
T Consensus 138 ~~~~~~--------~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 138 SRAFAS--------LNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp CSCSSS--------HHHHHHHHTTSEEEEEEEEEEES
T ss_pred EeccCC--------HHHHHHHHHHhcCCCcEEEEEeC
Confidence 864322 26899999999999999998654
No 66
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.38 E-value=8e-12 Score=108.03 Aligned_cols=104 Identities=17% Similarity=0.150 Sum_probs=77.1
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHH--hcCCCCcc
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLK--TVQSGTFD 144 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~--~~~~~~fD 144 (299)
++..+|||||||+|..+..+++..+..+|++||+++.+++.+.+.... .+++.++.+|+..... .. .++||
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~------~~~v~~~~~d~~~~~~~~~~-~~~fD 128 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRE------RNNIIPLLFDASKPWKYSGI-VEKVD 128 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHH------CSSEEEECSCTTCGGGTTTT-CCCEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhc------CCCeEEEEcCCCCchhhccc-cccee
Confidence 456799999999999999998764346899999999987655554322 2478888899865311 12 47899
Q ss_pred EEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 145 AIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 145 vIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
+|+++...+. -...+++.+++.|||||.|++..
T Consensus 129 ~V~~~~~~~~------~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 129 LIYQDIAQKN------QIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp EEEECCCSTT------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEeccChh------HHHHHHHHHHHHhCCCCEEEEEE
Confidence 9999854331 11345899999999999998853
No 67
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.37 E-value=4.4e-12 Score=112.68 Aligned_cols=116 Identities=16% Similarity=0.143 Sum_probs=88.1
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.+..+|||+|||+|.++..+++.. . +|+++|+|+.+++.+++++...+ -. ++++.+|+.+.+. .++||+|
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g-~-~v~gvDi~~~~v~~a~~n~~~~~----~~-v~~~~~d~~~~~~---~~~fD~V 188 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLG-G-KALGVDIDPMVLPQAEANAKRNG----VR-PRFLEGSLEAALP---FGPFDLL 188 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTT-C-EEEEEESCGGGHHHHHHHHHHTT----CC-CEEEESCHHHHGG---GCCEEEE
T ss_pred CCCCEEEEecCCCcHHHHHHHHhC-C-eEEEEECCHHHHHHHHHHHHHcC----Cc-EEEEECChhhcCc---CCCCCEE
Confidence 457899999999999999988874 3 89999999999999999887541 12 8999999988653 4689999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhhh
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHRI 203 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~~ 203 (299)
+++.... ....+++.+.+.|+|||.+++.... ......+.+.+++.
T Consensus 189 v~n~~~~-------~~~~~l~~~~~~LkpgG~lils~~~----~~~~~~v~~~l~~~ 234 (254)
T 2nxc_A 189 VANLYAE-------LHAALAPRYREALVPGGRALLTGIL----KDRAPLVREAMAGA 234 (254)
T ss_dssp EEECCHH-------HHHHHHHHHHHHEEEEEEEEEEEEE----GGGHHHHHHHHHHT
T ss_pred EECCcHH-------HHHHHHHHHHHHcCCCCEEEEEeec----cCCHHHHHHHHHHC
Confidence 9875321 1267899999999999999985311 12234455555544
No 68
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.37 E-value=4.7e-12 Score=119.00 Aligned_cols=112 Identities=13% Similarity=0.126 Sum_probs=85.6
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAII 147 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi 147 (299)
...+|||+|||+|.++..+++..+..+|++||+|+.+++.+++++...+.. +..+++++.+|+.+.+ ++++||+|+
T Consensus 222 ~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~-~~~~v~~~~~D~~~~~---~~~~fD~Ii 297 (375)
T 4dcm_A 222 LEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPE-ALDRCEFMINNALSGV---EPFRFNAVL 297 (375)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGG-GGGGEEEEECSTTTTC---CTTCEEEEE
T ss_pred CCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCC-cCceEEEEechhhccC---CCCCeeEEE
Confidence 348999999999999999998765679999999999999999998765210 1236899999988754 257899999
Q ss_pred EcCCCCCCCC-CCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 148 IDAFDPIRPG-HDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 148 ~D~~~~~~~~-~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++.+-..+.. ..-...++++.+.+.|+|||++++..
T Consensus 298 ~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 298 CNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVA 334 (375)
T ss_dssp ECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 9876543211 11123578999999999999998844
No 69
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.37 E-value=2.9e-12 Score=112.26 Aligned_cols=117 Identities=21% Similarity=0.300 Sum_probs=91.2
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAII 147 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi 147 (299)
+..+|||+|||+|..+..+++. ..+|+++|+++.+++.|++++...+ . +++++++.+|+.+... +++.||+|+
T Consensus 91 ~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~--~-~~~~~~~~~d~~~~~~--~~~~~D~v~ 163 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFN--L-GKNVKFFNVDFKDAEV--PEGIFHAAF 163 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTT--C-CTTEEEECSCTTTSCC--CTTCBSEEE
T ss_pred CCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcC--C-CCcEEEEEcChhhccc--CCCcccEEE
Confidence 5679999999999999999988 4689999999999999999876541 1 3689999999877541 246899999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhhhc
Q 037807 148 IDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHRIF 204 (299)
Q Consensus 148 ~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~~F 204 (299)
++.+++ ..+++.+.+.|+|||.+++...+ .+....+.+.+++.|
T Consensus 164 ~~~~~~---------~~~l~~~~~~L~~gG~l~~~~~~----~~~~~~~~~~l~~~f 207 (248)
T 2yvl_A 164 VDVREP---------WHYLEKVHKSLMEGAPVGFLLPT----ANQVIKLLESIENYF 207 (248)
T ss_dssp ECSSCG---------GGGHHHHHHHBCTTCEEEEEESS----HHHHHHHHHHSTTTE
T ss_pred ECCcCH---------HHHHHHHHHHcCCCCEEEEEeCC----HHHHHHHHHHHHhhC
Confidence 986654 56899999999999999986533 233445555555445
No 70
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.37 E-value=1.3e-11 Score=107.05 Aligned_cols=103 Identities=17% Similarity=0.175 Sum_probs=81.3
Q ss_pred CCCCeEEEEeccccHHHHHHHhc-CCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHH--HhcCCCCc
Q 037807 67 PNPKKVLLIGGGDGGILREISRH-ASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYL--KTVQSGTF 143 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l--~~~~~~~f 143 (299)
.+..+|||+|||+|.++..+++. .+..+|++||+++.+++.++++... .++++++.+|+.+.. ... .++|
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~------~~~v~~~~~d~~~~~~~~~~-~~~~ 144 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEE------RRNIVPILGDATKPEEYRAL-VPKV 144 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSS------CTTEEEEECCTTCGGGGTTT-CCCE
T ss_pred CCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhc------cCCCEEEEccCCCcchhhcc-cCCc
Confidence 45679999999999999999976 3346899999999999999887653 268999999987632 222 4689
Q ss_pred cEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 144 DAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 144 DvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
|+|++|.+.+. ....+++.+.+.|+|||.+++.
T Consensus 145 D~v~~~~~~~~------~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 145 DVIFEDVAQPT------QAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp EEEEECCCSTT------HHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEECCCCHh------HHHHHHHHHHHhcCCCCEEEEE
Confidence 99999876331 1135699999999999998874
No 71
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.37 E-value=1.2e-12 Score=114.23 Aligned_cols=105 Identities=22% Similarity=0.296 Sum_probs=86.4
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcC-CCCccEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQ-SGTFDAI 146 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~-~~~fDvI 146 (299)
++.+||+||||+|..+..+++..+..+|+++|+++.+++.|++++...+. .++++++.+|+.+++.... +++||+|
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~~~~~~~~~fD~I 130 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGL---ESRIELLFGDALQLGEKLELYPLFDVL 130 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTC---TTTEEEECSCGGGSHHHHTTSCCEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCcEEEEECCHHHHHHhcccCCCccEE
Confidence 56799999999999999999864457899999999999999998875421 3579999999988655331 3689999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
+++...+ ....+++.+.+.|+|||++++.
T Consensus 131 ~~~~~~~-------~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 131 FIDAAKG-------QYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp EEEGGGS-------CHHHHHHHHGGGEEEEEEEEEE
T ss_pred EECCCHH-------HHHHHHHHHHHHcCCCeEEEEE
Confidence 9986543 1278999999999999999986
No 72
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.37 E-value=2.4e-12 Score=113.39 Aligned_cols=117 Identities=18% Similarity=0.237 Sum_probs=92.2
Q ss_pred CCCCeEEEEeccccHHHHHHHhc-CCccEEEEEECCHHHHHHHHhhchhh-hcCCCCCCEEEEEccHHHHHHhcCCCCcc
Q 037807 67 PNPKKVLLIGGGDGGILREISRH-ASVEQIHICEIDTMLINVYKEYFPEI-AIGYEDSRVILHVCDGSEYLKTVQSGTFD 144 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~-~~~~~~~rv~v~~~D~~~~l~~~~~~~fD 144 (299)
.+..+|||+|||+|..+..+++. .+..+|+++|+++.+++.|++++... + .++++++.+|+.+.- .++++||
T Consensus 95 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g----~~~v~~~~~d~~~~~--~~~~~~D 168 (258)
T 2pwy_A 95 APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ----VENVRFHLGKLEEAE--LEEAAYD 168 (258)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEESCGGGCC--CCTTCEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC----CCCEEEEECchhhcC--CCCCCcC
Confidence 45679999999999999999986 44578999999999999999987653 2 368999999987751 1246899
Q ss_pred EEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhh
Q 037807 145 AIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHR 202 (299)
Q Consensus 145 vIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~ 202 (299)
+|++|.+++ .++++.+.+.|+|||.+++...+ .+....+.+.+++
T Consensus 169 ~v~~~~~~~---------~~~l~~~~~~L~~gG~l~~~~~~----~~~~~~~~~~l~~ 213 (258)
T 2pwy_A 169 GVALDLMEP---------WKVLEKAALALKPDRFLVAYLPN----ITQVLELVRAAEA 213 (258)
T ss_dssp EEEEESSCG---------GGGHHHHHHHEEEEEEEEEEESC----HHHHHHHHHHHTT
T ss_pred EEEECCcCH---------HHHHHHHHHhCCCCCEEEEEeCC----HHHHHHHHHHHHH
Confidence 999987654 57899999999999999986533 2344556666654
No 73
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.36 E-value=1.3e-12 Score=111.63 Aligned_cols=130 Identities=14% Similarity=0.179 Sum_probs=90.5
Q ss_pred ceEEEEcCeeeccCcchhhHHH-HHHhhcccCCCCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhch
Q 037807 35 GKVFVLDGALQLTEKDECAYQE-MITHLPLCSIPNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFP 113 (299)
Q Consensus 35 g~~l~ldg~~q~~~~de~~Y~e-~l~~~~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~ 113 (299)
...+.+|..+.+..... ...+ ++..+.. ..++..+|||||||+|..+..+++.+ ..+|+++|+++.+++.|++++.
T Consensus 28 ~~~~~~~~~~~f~~~~~-~~~~~~~~~l~~-~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~ 104 (205)
T 3grz_A 28 QEIIRLDPGLAFGTGNH-QTTQLAMLGIER-AMVKPLTVADVGTGSGILAIAAHKLG-AKSVLATDISDESMTAAEENAA 104 (205)
T ss_dssp CEEEEESCC-----CCH-HHHHHHHHHHHH-HCSSCCEEEEETCTTSHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHH
T ss_pred ceeEEecCCcccCCCCC-ccHHHHHHHHHH-hccCCCEEEEECCCCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHH
Confidence 34566776654443321 1122 2222211 12457899999999999999988874 5689999999999999999887
Q ss_pred hhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 114 EIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 114 ~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
..+ ..+++++.+|+.++. +++||+|+++..... ...+++.+.+.|+|||.+++.
T Consensus 105 ~~~----~~~v~~~~~d~~~~~----~~~fD~i~~~~~~~~-------~~~~l~~~~~~L~~gG~l~~~ 158 (205)
T 3grz_A 105 LNG----IYDIALQKTSLLADV----DGKFDLIVANILAEI-------LLDLIPQLDSHLNEDGQVIFS 158 (205)
T ss_dssp HTT----CCCCEEEESSTTTTC----CSCEEEEEEESCHHH-------HHHHGGGSGGGEEEEEEEEEE
T ss_pred HcC----CCceEEEeccccccC----CCCceEEEECCcHHH-------HHHHHHHHHHhcCCCCEEEEE
Confidence 542 234999999987643 578999999754321 267788899999999999984
No 74
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.36 E-value=4.5e-12 Score=119.83 Aligned_cols=123 Identities=14% Similarity=0.162 Sum_probs=92.0
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAII 147 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi 147 (299)
+.++|||+|||+|..+..+++.. .. |++||+|+.+++.|++++..++. ..++..+|+.+++... .+.||+|+
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~g-a~-V~avDis~~al~~a~~n~~~ng~-----~~~~~~~D~~~~l~~~-~~~fD~Ii 285 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKG-AY-ALAVDKDLEALGVLDQAALRLGL-----RVDIRHGEALPTLRGL-EGPFHHVL 285 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTT-CE-EEEEESCHHHHHHHHHHHHHHTC-----CCEEEESCHHHHHHTC-CCCEEEEE
T ss_pred CCCeEEEcccchhHHHHHHHHcC-Ce-EEEEECCHHHHHHHHHHHHHhCC-----CCcEEEccHHHHHHHh-cCCCCEEE
Confidence 47899999999999999999873 44 99999999999999999876621 2356799999998765 34599999
Q ss_pred EcCCCCCCCCCCCC-----cHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHH
Q 037807 148 IDAFDPIRPGHDLF-----EGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLID 198 (299)
Q Consensus 148 ~D~~~~~~~~~~l~-----t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~ 198 (299)
+|++.-......+. ..++++.+.+.|+|||++++.+.+.....+.+..++.
T Consensus 286 ~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~ 341 (393)
T 4dmg_A 286 LDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVAR 341 (393)
T ss_dssp ECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHH
T ss_pred ECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHH
Confidence 99764221111111 1478888899999999999776666655555554444
No 75
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.36 E-value=3.3e-12 Score=111.77 Aligned_cols=103 Identities=18% Similarity=0.220 Sum_probs=81.1
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
+++.+|||||||+|..+..+++.. .+|++||+|+.+++.+++. ++++.+|+.+++...++++||+|
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~------------~~~~~~d~~~~~~~~~~~~fD~i 105 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEEG--IESIGVDINEDMIKFCEGK------------FNVVKSDAIEYLKSLPDKYLDGV 105 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHHT--CCEEEECSCHHHHHHHHTT------------SEEECSCHHHHHHTSCTTCBSEE
T ss_pred cCCCeEEEEeCCCCHHHHHHHhCC--CcEEEEECCHHHHHHHHhh------------cceeeccHHHHhhhcCCCCeeEE
Confidence 456899999999999999998873 4699999999999998864 67889999988755446899999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCC
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAES 185 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s 185 (299)
++...-...+.. ....+++.+++.|||||.+++...+
T Consensus 106 ~~~~~l~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~ 142 (240)
T 3dli_A 106 MISHFVEHLDPE--RLFELLSLCYSKMKYSSYIVIESPN 142 (240)
T ss_dssp EEESCGGGSCGG--GHHHHHHHHHHHBCTTCCEEEEEEC
T ss_pred EECCchhhCCcH--HHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 985332211110 1168999999999999999987643
No 76
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.36 E-value=3.3e-12 Score=114.71 Aligned_cols=123 Identities=11% Similarity=0.003 Sum_probs=94.8
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.+..+|||+|||+|.++..+++..+..+|++||+++.+++.|++++..++ -++++++.+|+.++ .. .++||+|
T Consensus 118 ~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~----l~~~~~~~~d~~~~-~~--~~~~D~V 190 (272)
T 3a27_A 118 NENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNK----LNNVIPILADNRDV-EL--KDVADRV 190 (272)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTT----CSSEEEEESCGGGC-CC--TTCEEEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC----CCCEEEEECChHHc-Cc--cCCceEE
Confidence 45689999999999999999987545689999999999999999987652 24789999999887 42 5789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCCcccc-hHHHHHHHHHHhhhc
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAESLWFQ-QFSVQHLIDDCHRIF 204 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s~~~~-~~~~~~~~~~l~~~F 204 (299)
++|.+. -..+++..+.+.|+|||++++.+...... .+.+.+.++.+.+.+
T Consensus 191 i~d~p~--------~~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~~~ 241 (272)
T 3a27_A 191 IMGYVH--------KTHKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKN 241 (272)
T ss_dssp EECCCS--------SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHHHT
T ss_pred EECCcc--------cHHHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHHHh
Confidence 999764 12678999999999999999865322111 134556666666544
No 77
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.36 E-value=3.8e-12 Score=115.14 Aligned_cols=143 Identities=13% Similarity=0.164 Sum_probs=99.4
Q ss_pred ecCCceEEEEcCeeeccCcchhhH-HHHHHhhcccCCCCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHH
Q 037807 31 SSSYGKVFVLDGALQLTEKDECAY-QEMITHLPLCSIPNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYK 109 (299)
Q Consensus 31 ~~~~g~~l~ldg~~q~~~~de~~Y-~e~l~~~~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~ 109 (299)
...+|..+.++..+....++.... ...+..+.. ....+|||||||+|.++..+++. +..+|++||+|+.+++.|+
T Consensus 88 ~~f~~~~~~v~~~~lipr~~te~lv~~~l~~~~~---~~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~ 163 (284)
T 1nv8_A 88 KEFMGLSFLVEEGVFVPRPETEELVELALELIRK---YGIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIAR 163 (284)
T ss_dssp EEETTEEEECCTTSCCCCTTHHHHHHHHHHHHHH---HTCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHH
T ss_pred eEECCeEEEeCCCceecChhHHHHHHHHHHHhcc---cCCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHH
Confidence 345667777765544444432222 222332221 24579999999999999999988 5679999999999999999
Q ss_pred hhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCc---cEEEEcCCCCCCC----CCCCC-----------cHHHHHHHH-
Q 037807 110 EYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTF---DAIIIDAFDPIRP----GHDLF-----------EGPFFELVA- 170 (299)
Q Consensus 110 ~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~f---DvIi~D~~~~~~~----~~~l~-----------t~ef~~~~~- 170 (299)
++....+ . ..+++++.+|+.+.+. ++| |+|+++++..... +...+ ..++|+.+.
T Consensus 164 ~n~~~~~--l-~~~v~~~~~D~~~~~~----~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~ 236 (284)
T 1nv8_A 164 KNAERHG--V-SDRFFVRKGEFLEPFK----EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFG 236 (284)
T ss_dssp HHHHHTT--C-TTSEEEEESSTTGGGG----GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHH
T ss_pred HHHHHcC--C-CCceEEEECcchhhcc----cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHH
Confidence 9987642 1 3479999999987653 468 9999986542110 00001 137999999
Q ss_pred HhcCCCcEEEEecC
Q 037807 171 KALRPGGAMCIQAE 184 (299)
Q Consensus 171 ~~LkpgGvlv~~~~ 184 (299)
+.|+|||.+++..+
T Consensus 237 ~~l~pgG~l~~e~~ 250 (284)
T 1nv8_A 237 RYDTSGKIVLMEIG 250 (284)
T ss_dssp HCCCTTCEEEEECC
T ss_pred hcCCCCCEEEEEEC
Confidence 99999999998653
No 78
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.36 E-value=7.7e-12 Score=118.15 Aligned_cols=129 Identities=17% Similarity=0.114 Sum_probs=96.7
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcC--CCCcc
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQ--SGTFD 144 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~--~~~fD 144 (299)
...++|||+|||+|+++..+++.. ..+|++||+|+.+++.|++++..++ +.+++++++.+|+.+++.... .++||
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~ng--l~~~~v~~~~~D~~~~~~~~~~~~~~fD 295 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELNK--LDLSKAEFVRDDVFKLLRTYRDRGEKFD 295 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTT--CCGGGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcC--CCccceEEEECCHHHHHHHHHhcCCCCC
Confidence 356899999999999999999874 5789999999999999999987652 101289999999999876431 46899
Q ss_pred EEEEcCCCCCCCCCCC-----CcHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHH
Q 037807 145 AIIIDAFDPIRPGHDL-----FEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLID 198 (299)
Q Consensus 145 vIi~D~~~~~~~~~~l-----~t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~ 198 (299)
+|++|++........+ ...+++..+.+.|+|||++++.+.+.....+.+..++.
T Consensus 296 ~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~ 354 (396)
T 3c0k_A 296 VIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIA 354 (396)
T ss_dssp EEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHHHHHHHHH
T ss_pred EEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHH
Confidence 9999986532111111 12578888999999999999877665555554444443
No 79
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.36 E-value=1.7e-12 Score=112.78 Aligned_cols=106 Identities=12% Similarity=0.162 Sum_probs=83.4
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
+++.+|||||||+|..+..+++..+..+|+++|+++.+++.|++.+.. .++++++.+|+.+... .++||+|
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~------~~~~~~~~~d~~~~~~---~~~fD~v 113 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRG------NLKVKYIEADYSKYDF---EEKYDMV 113 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCS------CTTEEEEESCTTTCCC---CSCEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhcc------CCCEEEEeCchhccCC---CCCceEE
Confidence 457899999999999999999875557899999999999999998764 2489999999876532 3789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++...-...+.. -..++++.+++.|+|||.+++..
T Consensus 114 ~~~~~l~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 114 VSALSIHHLEDE--DKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp EEESCGGGSCHH--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEeCccccCCHH--HHHHHHHHHHHhcCCCcEEEEEE
Confidence 986432211110 01358999999999999999854
No 80
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.36 E-value=4.3e-12 Score=115.01 Aligned_cols=108 Identities=16% Similarity=0.085 Sum_probs=83.9
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
++..+|||||||+|..+..+++..+ .+|++||+++.+++.|++.+...+ + ..+++++.+|+.++ +++||+|
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~--~-~~~v~~~~~d~~~~-----~~~fD~v 141 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVD--S-PRRKEVRIQGWEEF-----DEPVDRI 141 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSC--C-SSCEEEEECCGGGC-----CCCCSEE
T ss_pred CCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcC--C-CCceEEEECCHHHc-----CCCccEE
Confidence 4567999999999999999998733 689999999999999999876542 1 34899999998765 5789999
Q ss_pred EEcCCCCCCCC-----CCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPG-----HDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~-----~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++...-...+. ..-....+++.+.+.|+|||+++++.
T Consensus 142 ~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 183 (302)
T 3hem_A 142 VSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT 183 (302)
T ss_dssp EEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEE
T ss_pred EEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEE
Confidence 98532211111 11122689999999999999999875
No 81
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.36 E-value=1.9e-11 Score=101.32 Aligned_cols=114 Identities=14% Similarity=0.150 Sum_probs=89.3
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.+..+|||+|||+|..+..+++ +..+++++|+++.+++.+++++...+ -++++++.+|+.+.+. +++||+|
T Consensus 34 ~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~~~~~~d~~~~~~---~~~~D~i 104 (183)
T 2yxd_A 34 NKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFN----IKNCQIIKGRAEDVLD---KLEFNKA 104 (183)
T ss_dssp CTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHTT----CCSEEEEESCHHHHGG---GCCCSEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcC----CCcEEEEECCcccccc---CCCCcEE
Confidence 3567999999999999999988 35789999999999999999887541 2579999999988544 3689999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhhh
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHRI 203 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~~ 203 (299)
+++.. . ...++++.+++. |||.+++... .......+.+.+++.
T Consensus 105 ~~~~~-~-------~~~~~l~~~~~~--~gG~l~~~~~----~~~~~~~~~~~l~~~ 147 (183)
T 2yxd_A 105 FIGGT-K-------NIEKIIEILDKK--KINHIVANTI----VLENAAKIINEFESR 147 (183)
T ss_dssp EECSC-S-------CHHHHHHHHHHT--TCCEEEEEES----CHHHHHHHHHHHHHT
T ss_pred EECCc-c-------cHHHHHHHHhhC--CCCEEEEEec----ccccHHHHHHHHHHc
Confidence 99866 1 127789998888 9999998542 233455566666654
No 82
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.35 E-value=1.7e-12 Score=116.48 Aligned_cols=116 Identities=16% Similarity=0.217 Sum_probs=90.8
Q ss_pred CCCCeEEEEeccccHHHHHHHhc-CCccEEEEEECCHHHHHHHHhhchhh-hcCCCCCCEEEEEccHHHHHHhcCCCCcc
Q 037807 67 PNPKKVLLIGGGDGGILREISRH-ASVEQIHICEIDTMLINVYKEYFPEI-AIGYEDSRVILHVCDGSEYLKTVQSGTFD 144 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~-~~~~~~~rv~v~~~D~~~~l~~~~~~~fD 144 (299)
.+..+|||+|||+|..+..+++. .+..+|+++|+++.+++.|++++... + .++++++.+|+.+.+. +++||
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g----~~~v~~~~~d~~~~~~---~~~fD 181 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYD----IGNVRTSRSDIADFIS---DQMYD 181 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSC----CTTEEEECSCTTTCCC---SCCEE
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCC----CCcEEEEECchhccCc---CCCcc
Confidence 45679999999999999999986 44578999999999999999987642 1 3589999999877432 56899
Q ss_pred EEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhh
Q 037807 145 AIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHR 202 (299)
Q Consensus 145 vIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~ 202 (299)
+|++|.+++ .++++.+.+.|+|||.+++...+. .....+.+.+++
T Consensus 182 ~Vi~~~~~~---------~~~l~~~~~~LkpgG~l~i~~~~~----~~~~~~~~~l~~ 226 (275)
T 1yb2_A 182 AVIADIPDP---------WNHVQKIASMMKPGSVATFYLPNF----DQSEKTVLSLSA 226 (275)
T ss_dssp EEEECCSCG---------GGSHHHHHHTEEEEEEEEEEESSH----HHHHHHHHHSGG
T ss_pred EEEEcCcCH---------HHHHHHHHHHcCCCCEEEEEeCCH----HHHHHHHHHHHH
Confidence 999987654 578999999999999999865332 234455555554
No 83
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.35 E-value=4.4e-12 Score=119.34 Aligned_cols=125 Identities=12% Similarity=0.106 Sum_probs=95.3
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhc--CCCCccE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTV--QSGTFDA 145 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~--~~~~fDv 145 (299)
...+|||+|||+|.++..+++. ..+|++||+++.+++.|++++..++ -.+++++.+|+.+++... ..++||+
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~----~~~~~~~~~d~~~~~~~~~~~~~~fD~ 282 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNG----LGNVRVLEANAFDLLRRLEKEGERFDL 282 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTT----CTTEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcC----CCCceEEECCHHHHHHHHHhcCCCeeE
Confidence 5679999999999999999987 5789999999999999999987652 234999999999987643 1468999
Q ss_pred EEEcCCCCCCCCCCCC-----cHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHH
Q 037807 146 IIIDAFDPIRPGHDLF-----EGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLID 198 (299)
Q Consensus 146 Ii~D~~~~~~~~~~l~-----t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~ 198 (299)
|++|++........+. ..+++..+.+.|+|||++++.+.+.....+.+..++.
T Consensus 283 Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~ 340 (382)
T 1wxx_A 283 VVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVA 340 (382)
T ss_dssp EEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHH
T ss_pred EEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHH
Confidence 9999765321111111 1468888999999999999987666555554444443
No 84
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.35 E-value=2.1e-12 Score=115.20 Aligned_cols=107 Identities=18% Similarity=0.180 Sum_probs=86.1
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
++..+|||||||+|..+..+++..+..+|++||+++.+++.+++.+... ..++++++.+|+.+... ++++||+|
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~~d~~~~~~--~~~~fD~v 109 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKN----GIKNVKFLQANIFSLPF--EDSSFDHI 109 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHT----TCCSEEEEECCGGGCCS--CTTCEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc----CCCCcEEEEcccccCCC--CCCCeeEE
Confidence 4678999999999999999998755679999999999999999987654 23579999999886432 35789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++...-...+. ...+++.+++.|+|||.+++..
T Consensus 110 ~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 110 FVCFVLEHLQS----PEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp EEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEechhhhcCC----HHHHHHHHHHHcCCCcEEEEEE
Confidence 98643322111 1689999999999999998864
No 85
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.35 E-value=3.4e-12 Score=109.20 Aligned_cols=101 Identities=23% Similarity=0.270 Sum_probs=82.3
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.+..+|||||||+|..+..+++. ..+|+++|+++.+++.|++++... .-++++++.+|+.+.... .++||+|
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~----~~~~v~~~~~d~~~~~~~--~~~~D~i 147 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNL----DLHNVSTRHGDGWQGWQA--RAPFDAI 147 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHT----TCCSEEEEESCGGGCCGG--GCCEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHc----CCCceEEEECCcccCCcc--CCCccEE
Confidence 46789999999999999999988 368999999999999999988764 234799999999875543 4789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCC
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAES 185 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s 185 (299)
+++...+..+ +.+.+.|+|||.+++..+.
T Consensus 148 ~~~~~~~~~~----------~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 148 IVTAAPPEIP----------TALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp EESSBCSSCC----------THHHHTEEEEEEEEEEECS
T ss_pred EEccchhhhh----------HHHHHhcccCcEEEEEEcC
Confidence 9986544222 2578999999999986643
No 86
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.35 E-value=2.5e-12 Score=116.45 Aligned_cols=116 Identities=17% Similarity=0.196 Sum_probs=81.9
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcC-----------------------------
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIG----------------------------- 118 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~----------------------------- 118 (299)
.+++|||||||+|..+..+++..+..+|++||+|+.+++.|++++......
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 478999999999999999998755579999999999999999986543100
Q ss_pred -----------C--------------CCCCEEEEEccHHHH---HHhcCCCCccEEEEcCCCCCCC-C-CCCCcHHHHHH
Q 037807 119 -----------Y--------------EDSRVILHVCDGSEY---LKTVQSGTFDAIIIDAFDPIRP-G-HDLFEGPFFEL 168 (299)
Q Consensus 119 -----------~--------------~~~rv~v~~~D~~~~---l~~~~~~~fDvIi~D~~~~~~~-~-~~l~t~ef~~~ 168 (299)
+ -..+++++.+|.... +.....++||+|++......-. . ..--...+++.
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 0 014899999998632 2222368899999864321000 0 00012678999
Q ss_pred HHHhcCCCcEEEEec
Q 037807 169 VAKALRPGGAMCIQA 183 (299)
Q Consensus 169 ~~~~LkpgGvlv~~~ 183 (299)
++++|+|||+|++..
T Consensus 206 ~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 206 IYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHEEEEEEEEEEC
T ss_pred HHHHhCCCcEEEEec
Confidence 999999999999964
No 87
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.35 E-value=3.8e-12 Score=109.64 Aligned_cols=113 Identities=18% Similarity=0.183 Sum_probs=82.2
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcC-CCCCCEEEEEccHHHHHHhcCCCCccE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIG-YEDSRVILHVCDGSEYLKTVQSGTFDA 145 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~-~~~~rv~v~~~D~~~~l~~~~~~~fDv 145 (299)
.++.+|||||||+|..+..+++..+..+|++||+|+.+++.|++.+...... ...++++++.+|+... .. ..++||+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~-~~~~fD~ 105 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYR-DK-RFSGYDA 105 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSC-CG-GGTTCSE
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccc-cc-ccCCCCE
Confidence 3578999999999999999998765579999999999999999987643110 0113899999997432 21 2478999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 146 IIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 146 Ii~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
|++...-...+.. -...+++.+++.|+|||++++..
T Consensus 106 V~~~~~l~~~~~~--~~~~~l~~~~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 106 ATVIEVIEHLDEN--RLQAFEKVLFEFTRPQTVIVSTP 141 (219)
T ss_dssp EEEESCGGGCCHH--HHHHHHHHHHTTTCCSEEEEEEE
T ss_pred EEEHHHHHhCCHH--HHHHHHHHHHHhhCCCEEEEEcc
Confidence 9985322111100 01478999999999999877643
No 88
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.35 E-value=2e-12 Score=111.39 Aligned_cols=112 Identities=15% Similarity=0.164 Sum_probs=81.8
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcC-CCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIG-YEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~-~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
++.+|||||||+|..+..+++..+..+|++||+|+.+++.|++.+...+.. ...++++++.+|+... .. ..++||+|
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~-~~~~fD~v 106 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQ-DK-RFHGYDAA 106 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSC-CG-GGCSCSEE
T ss_pred CCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccc-cc-cCCCcCEE
Confidence 568999999999999999998765679999999999999999987543100 0123899999997432 21 24789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++...-...+.. ....+++.+++.|+|||++++..
T Consensus 107 ~~~~~l~~~~~~--~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 107 TVIEVIEHLDLS--RLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp EEESCGGGCCHH--HHHHHHHHHHTTTCCSEEEEEEE
T ss_pred eeHHHHHcCCHH--HHHHHHHHHHHHcCCCEEEEEcc
Confidence 985432211100 01578999999999999887643
No 89
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.34 E-value=1.7e-12 Score=119.83 Aligned_cols=123 Identities=21% Similarity=0.229 Sum_probs=89.7
Q ss_pred CCCCeEEEEeccccHHHHHHHhc-CCccEEEEEECCHHHHHHHHhhchhhh-----cCC--CCCCEEEEEccHHHHHHhc
Q 037807 67 PNPKKVLLIGGGDGGILREISRH-ASVEQIHICEIDTMLINVYKEYFPEIA-----IGY--EDSRVILHVCDGSEYLKTV 138 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~-----~~~--~~~rv~v~~~D~~~~l~~~ 138 (299)
.+..+|||+|||+|..+..+++. .+..+|+++|+++.+++.|++++...+ ... ..++++++.+|+.+.+...
T Consensus 104 ~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~ 183 (336)
T 2b25_A 104 NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDI 183 (336)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC---
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccccc
Confidence 45679999999999999999986 344789999999999999999876431 001 1358999999998754322
Q ss_pred CCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhh
Q 037807 139 QSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHR 202 (299)
Q Consensus 139 ~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~ 202 (299)
++++||+|++|..++ ..+++.+.+.|+|||.+++... ........++.+++
T Consensus 184 ~~~~fD~V~~~~~~~---------~~~l~~~~~~LkpgG~lv~~~~----~~~~~~~~~~~l~~ 234 (336)
T 2b25_A 184 KSLTFDAVALDMLNP---------HVTLPVFYPHLKHGGVCAVYVV----NITQVIELLDGIRT 234 (336)
T ss_dssp ----EEEEEECSSST---------TTTHHHHGGGEEEEEEEEEEES----SHHHHHHHHHHHHH
T ss_pred CCCCeeEEEECCCCH---------HHHHHHHHHhcCCCcEEEEEeC----CHHHHHHHHHHHHh
Confidence 246799999987665 3378999999999999998543 23344555666654
No 90
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.34 E-value=3.2e-12 Score=114.75 Aligned_cols=107 Identities=19% Similarity=0.353 Sum_probs=84.8
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
+++.+|||||||+|..+..+++.. .+|++||+++.+++.|++.+...+ -.++++++.+|+.+.... .+++||+|
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~-~~~~fD~v 140 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMAERG--HQVILCDLSAQMIDRAKQAAEAKG---VSDNMQFIHCAAQDVASH-LETPVDLI 140 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHC-C---CGGGEEEEESCGGGTGGG-CSSCEEEE
T ss_pred CCCCEEEEeCCcchHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHhcC---CCcceEEEEcCHHHhhhh-cCCCceEE
Confidence 346799999999999999999873 589999999999999999876431 126899999999886532 26899999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++...-...+. ...+++.+++.|+|||++++..
T Consensus 141 ~~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~~~~ 173 (285)
T 4htf_A 141 LFHAVLEWVAD----PRSVLQTLWSVLRPGGVLSLMF 173 (285)
T ss_dssp EEESCGGGCSC----HHHHHHHHHHTEEEEEEEEEEE
T ss_pred EECchhhcccC----HHHHHHHHHHHcCCCeEEEEEE
Confidence 98643221111 1689999999999999999865
No 91
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.34 E-value=1.4e-12 Score=114.87 Aligned_cols=100 Identities=17% Similarity=0.161 Sum_probs=79.7
Q ss_pred CCCeEEEEeccccHHHHHHHhc----CCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHH--HHhcCCC
Q 037807 68 NPKKVLLIGGGDGGILREISRH----ASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEY--LKTVQSG 141 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~----~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~--l~~~~~~ 141 (299)
++.+|||||||+|..+..+++. .+..+|++||+++.+++.|+. . .++++++.+|+.++ +......
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~----~-----~~~v~~~~gD~~~~~~l~~~~~~ 151 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS----D-----MENITLHQGDCSDLTTFEHLREM 151 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG----G-----CTTEEEEECCSSCSGGGGGGSSS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc----c-----CCceEEEECcchhHHHHHhhccC
Confidence 4679999999999999999886 445789999999999988872 1 36899999999875 3333234
Q ss_pred CccEEEEcCCCCCCCCCCCCcHHHHHHHHH-hcCCCcEEEEec
Q 037807 142 TFDAIIIDAFDPIRPGHDLFEGPFFELVAK-ALRPGGAMCIQA 183 (299)
Q Consensus 142 ~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~-~LkpgGvlv~~~ 183 (299)
+||+|++|.... ....+++.+.+ .|+|||+|++..
T Consensus 152 ~fD~I~~d~~~~-------~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 152 AHPLIFIDNAHA-------NTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp CSSEEEEESSCS-------SHHHHHHHHHHHTCCTTCEEEECS
T ss_pred CCCEEEECCchH-------hHHHHHHHHHHhhCCCCCEEEEEe
Confidence 799999987521 23678999997 999999999854
No 92
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.34 E-value=5.7e-12 Score=113.67 Aligned_cols=102 Identities=13% Similarity=0.107 Sum_probs=86.2
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.+..+|||+|||+|.++..++++. ..+|+++|+||..++.+++++..++. ..+++++.+|++++.. .+.||.|
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~g-~~~V~avD~np~a~~~~~~N~~~N~v---~~~v~~~~~D~~~~~~---~~~~D~V 196 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVYG-KAKVIAIEKDPYTFKFLVENIHLNKV---EDRMSAYNMDNRDFPG---ENIADRI 196 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHHT-CCEEEEECCCHHHHHHHHHHHHHTTC---TTTEEEECSCTTTCCC---CSCEEEE
T ss_pred CCCCEEEEecCcCcHHHHHHHHhc-CCeEEEEECCHHHHHHHHHHHHHcCC---CCcEEEEeCcHHHhcc---ccCCCEE
Confidence 467899999999999999999884 46899999999999999999887632 4589999999998864 5789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
+++.+.. +.+|+..+.+.|++||++.+..
T Consensus 197 i~~~p~~--------~~~~l~~a~~~lk~gG~ih~~~ 225 (278)
T 3k6r_A 197 LMGYVVR--------THEFIPKALSIAKDGAIIHYHN 225 (278)
T ss_dssp EECCCSS--------GGGGHHHHHHHEEEEEEEEEEE
T ss_pred EECCCCc--------HHHHHHHHHHHcCCCCEEEEEe
Confidence 9986532 3688999999999999987643
No 93
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.34 E-value=5.4e-12 Score=110.48 Aligned_cols=107 Identities=18% Similarity=0.275 Sum_probs=82.4
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAII 147 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi 147 (299)
++.+|||||||+|..+..+++.. ..+|++||+++.+++.|++.+.... ..+++++.+|+.++.. .+++||+|+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~~d~~~~~~--~~~~fD~v~ 151 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEG----KRVRNYFCCGLQDFTP--EPDSYDVIW 151 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGG----GGEEEEEECCGGGCCC--CSSCEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcC----CceEEEEEcChhhcCC--CCCCEEEEE
Confidence 47899999999999999988764 4689999999999999999886531 3478999999766432 246899999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 148 IDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 148 ~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++..-...+... ...+++.+.+.|+|||.+++..
T Consensus 152 ~~~~l~~~~~~~--~~~~l~~~~~~LkpgG~l~i~~ 185 (241)
T 2ex4_A 152 IQWVIGHLTDQH--LAEFLRRCKGSLRPNGIIVIKD 185 (241)
T ss_dssp EESCGGGSCHHH--HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EcchhhhCCHHH--HHHHHHHHHHhcCCCeEEEEEE
Confidence 874322111100 1478999999999999998843
No 94
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.33 E-value=3.1e-12 Score=114.67 Aligned_cols=117 Identities=20% Similarity=0.284 Sum_probs=91.3
Q ss_pred CCCCeEEEEeccccHHHHHHHhc-CCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccE
Q 037807 67 PNPKKVLLIGGGDGGILREISRH-ASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDA 145 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDv 145 (299)
.+..+|||+|||+|.++..+++. .+..+|+++|+++.+++.|++++...+ . .++++++.+|+.+.+ ++++||+
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~-~~~v~~~~~d~~~~~---~~~~~D~ 184 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWG--L-IERVTIKVRDISEGF---DEKDVDA 184 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTT--C-GGGEEEECCCGGGCC---SCCSEEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC--C-CCCEEEEECCHHHcc---cCCccCE
Confidence 35679999999999999999986 445789999999999999999876541 1 257999999988763 2468999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhh
Q 037807 146 IIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHR 202 (299)
Q Consensus 146 Ii~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~ 202 (299)
|++|.+++ .++++.+.+.|+|||.+++...+. .....+.+.+++
T Consensus 185 V~~~~~~~---------~~~l~~~~~~L~pgG~l~~~~~~~----~~~~~~~~~l~~ 228 (277)
T 1o54_A 185 LFLDVPDP---------WNYIDKCWEALKGGGRFATVCPTT----NQVQETLKKLQE 228 (277)
T ss_dssp EEECCSCG---------GGTHHHHHHHEEEEEEEEEEESSH----HHHHHHHHHHHH
T ss_pred EEECCcCH---------HHHHHHHHHHcCCCCEEEEEeCCH----HHHHHHHHHHHH
Confidence 99987654 578999999999999999865332 233445555544
No 95
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.33 E-value=2e-12 Score=114.96 Aligned_cols=106 Identities=16% Similarity=0.121 Sum_probs=85.0
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
+++.+|||||||+|..+..+++.+ ..+|++||+++.+++.|++.+...+ -.++++++.+|+.++. .++++||+|
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~--~~~~~fD~i 118 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGHV-TGQVTGLDFLSGFIDIFNRNARQSG---LQNRVTGIVGSMDDLP--FRNEELDLI 118 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTTC-SSEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEECCTTSCC--CCTTCEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHhcc-CCEEEEEeCCHHHHHHHHHHHHHcC---CCcCcEEEEcChhhCC--CCCCCEEEE
Confidence 467899999999999999999884 5689999999999999999876542 1367999999986642 125789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++...-... -...+++.+.+.|+|||.+++..
T Consensus 119 ~~~~~~~~~-----~~~~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 119 WSEGAIYNI-----GFERGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp EESSCGGGT-----CHHHHHHHHGGGEEEEEEEEEEE
T ss_pred EEcCCceec-----CHHHHHHHHHHHcCCCCEEEEEE
Confidence 985432211 12789999999999999999865
No 96
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.33 E-value=2.2e-12 Score=114.18 Aligned_cols=105 Identities=12% Similarity=0.233 Sum_probs=82.5
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.++.+|||||||+|.++..+++.. .+|+++|+++.+++.|++.+... ..++++++.+|+.+.. .++++||+|
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~----~~~~v~~~~~d~~~l~--~~~~~fD~V 107 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFV--KKVVAFDLTEDILKVARAFIEGN----GHQQVEYVQGDAEQMP--FTDERFHIV 107 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHT----TCCSEEEEECCC-CCC--SCTTCEEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhc----CCCceEEEEecHHhCC--CCCCCEEEE
Confidence 467899999999999999999875 48999999999999999987653 2357999999987632 235789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++...-...+. ...+++.++++|+|||.+++..
T Consensus 108 ~~~~~l~~~~d----~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 108 TCRIAAHHFPN----PASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp EEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEhhhhHhcCC----HHHHHHHHHHHcCCCCEEEEEE
Confidence 98643222111 1689999999999999998853
No 97
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.33 E-value=5.9e-13 Score=114.28 Aligned_cols=108 Identities=12% Similarity=0.012 Sum_probs=77.5
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhh-----c---CCCCCCEEEEEccHHHHHHhc
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIA-----I---GYEDSRVILHVCDGSEYLKTV 138 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~-----~---~~~~~rv~v~~~D~~~~l~~~ 138 (299)
+++.+|||+|||+|..+..+++.. .+|++||+++.|++.|++...... + .+..++++++++|+.+.....
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~~g--~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~ 98 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSGQG--YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD 98 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHHC--CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred CCCCEEEEeCCCCcHhHHHHHHCC--CeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCccc
Confidence 467899999999999999999873 489999999999999998753200 0 001368999999987753321
Q ss_pred CCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEE
Q 037807 139 QSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAM 179 (299)
Q Consensus 139 ~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvl 179 (299)
.++||+|++...-..-+.. -...+++.++++|||||.+
T Consensus 99 -~~~fD~v~~~~~l~~l~~~--~~~~~l~~~~r~LkpgG~~ 136 (203)
T 1pjz_A 99 -IGHCAAFYDRAAMIALPAD--MRERYVQHLEALMPQACSG 136 (203)
T ss_dssp -HHSEEEEEEESCGGGSCHH--HHHHHHHHHHHHSCSEEEE
T ss_pred -CCCEEEEEECcchhhCCHH--HHHHHHHHHHHHcCCCcEE
Confidence 1689999974322111100 0145899999999999973
No 98
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.33 E-value=2.6e-12 Score=110.76 Aligned_cols=106 Identities=22% Similarity=0.202 Sum_probs=82.4
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
+.+.+|||||||+|..+..+++... +++++|+|+.+++.|++++... .++++++.+|+.+.. .++++||+|
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~~--~~~~~~D~v 107 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSR-----ESNVEFIVGDARKLS--FEDKTFDYV 107 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT-----TCCCEEEECCTTSCC--SCTTCEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhc-----CCCceEEECchhcCC--CCCCcEEEE
Confidence 3478999999999999999988753 8999999999999999987653 368999999987632 225689999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++...-...... -...+++.+++.|+|||.+++..
T Consensus 108 ~~~~~~~~~~~~--~~~~~l~~~~~~L~~gG~l~~~~ 142 (227)
T 1ve3_A 108 IFIDSIVHFEPL--ELNQVFKEVRRVLKPSGKFIMYF 142 (227)
T ss_dssp EEESCGGGCCHH--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcCchHhCCHH--HHHHHHHHHHHHcCCCcEEEEEe
Confidence 987541111100 02578999999999999998864
No 99
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.33 E-value=2.2e-12 Score=110.79 Aligned_cols=105 Identities=15% Similarity=0.179 Sum_probs=82.5
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.++.+|||||||+|..+..+++.. .+|++||+++.+++.+++.+.. .++++++.+|+.++. ++++||+|
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~------~~~~~~~~~d~~~~~---~~~~fD~v 118 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRACQRTKR------WSHISWAATDILQFS---TAELFDLI 118 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHHHHTTT------CSSEEEEECCTTTCC---CSCCEEEE
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhccc------CCCeEEEEcchhhCC---CCCCccEE
Confidence 346799999999999999998874 5899999999999999998764 358999999987765 26889999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++...-...+... ....+++.+.+.|+|||++++..
T Consensus 119 ~~~~~l~~~~~~~-~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 119 VVAEVLYYLEDMT-QMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp EEESCGGGSSSHH-HHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEccHHHhCCCHH-HHHHHHHHHHHHcCCCCEEEEEe
Confidence 9864322111100 01467999999999999999854
No 100
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.33 E-value=3.8e-12 Score=112.06 Aligned_cols=106 Identities=18% Similarity=0.102 Sum_probs=84.6
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
++..+|||||||+|..+..+++..+ .+|++||+++.+++.+++++...+. ..+++++.+|+.++. .++++||+|
T Consensus 45 ~~~~~vLDiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~---~~~~~~~~~d~~~~~--~~~~~fD~v 118 (257)
T 3f4k_A 45 TDDAKIADIGCGTGGQTLFLADYVK-GQITGIDLFPDFIEIFNENAVKANC---ADRVKGITGSMDNLP--FQNEELDLI 118 (257)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHCC-SEEEEEESCHHHHHHHHHHHHHTTC---TTTEEEEECCTTSCS--SCTTCEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHhCC-CeEEEEECCHHHHHHHHHHHHHcCC---CCceEEEECChhhCC--CCCCCEEEE
Confidence 4567999999999999999998754 3899999999999999998765421 357999999986542 125789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++...-... -...+++.+.+.|+|||.+++..
T Consensus 119 ~~~~~l~~~-----~~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 119 WSEGAIYNI-----GFERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp EEESCSCCC-----CHHHHHHHHHTTEEEEEEEEEEE
T ss_pred EecChHhhc-----CHHHHHHHHHHHcCCCcEEEEEE
Confidence 986433221 13789999999999999999865
No 101
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.32 E-value=3e-12 Score=113.93 Aligned_cols=109 Identities=13% Similarity=0.064 Sum_probs=79.7
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhh-------h-cC-----CCCCCEEEEEccHHHH
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEI-------A-IG-----YEDSRVILHVCDGSEY 134 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~-------~-~~-----~~~~rv~v~~~D~~~~ 134 (299)
+..+|||+|||+|..+..+++.. .+|++||+++.+++.|++..... . .. -..++++++++|+.++
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~G--~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADRG--HTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHTT--CEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCeEEEeCCCCcHHHHHHHHCC--CeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 56799999999999999999873 48999999999999998764310 0 00 0136899999999876
Q ss_pred HHhcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEE
Q 037807 135 LKTVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCI 181 (299)
Q Consensus 135 l~~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~ 181 (299)
.... .++||+|+....-..-+.. -...+++.+.++|||||++++
T Consensus 146 ~~~~-~~~FD~V~~~~~l~~l~~~--~~~~~l~~~~~~LkpGG~l~l 189 (252)
T 2gb4_A 146 PRAN-IGKFDRIWDRGALVAINPG--DHDRYADIILSLLRKEFQYLV 189 (252)
T ss_dssp GGGC-CCCEEEEEESSSTTTSCGG--GHHHHHHHHHHTEEEEEEEEE
T ss_pred Cccc-CCCEEEEEEhhhhhhCCHH--HHHHHHHHHHHHcCCCeEEEE
Confidence 4321 3789999974332211111 125689999999999999864
No 102
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.32 E-value=5.2e-12 Score=111.14 Aligned_cols=104 Identities=13% Similarity=0.128 Sum_probs=83.5
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAII 147 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi 147 (299)
++.+|||||||+|..+..+++.. ..+|+++|+++.+++.|++.+. .++++++.+|+.+.- .++++||+|+
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~~d~~~~~--~~~~~fD~v~ 113 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHG-AKKVLGIDLSERMLTEAKRKTT-------SPVVCYEQKAIEDIA--IEPDAYNVVL 113 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHCC-------CTTEEEEECCGGGCC--CCTTCEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHhhc-------cCCeEEEEcchhhCC--CCCCCeEEEE
Confidence 57899999999999999999874 3489999999999999999874 468999999987642 2257899999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCC
Q 037807 148 IDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAES 185 (299)
Q Consensus 148 ~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s 185 (299)
+...-..... ...+++.+++.|+|||.+++...+
T Consensus 114 ~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~~~~~~ 147 (253)
T 3g5l_A 114 SSLALHYIAS----FDDICKKVYINLKSSGSFIFSVEH 147 (253)
T ss_dssp EESCGGGCSC----HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred Echhhhhhhh----HHHHHHHHHHHcCCCcEEEEEeCC
Confidence 8643221111 278999999999999999986544
No 103
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.32 E-value=2.8e-12 Score=115.44 Aligned_cols=107 Identities=14% Similarity=0.130 Sum_probs=85.6
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCC-ccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHAS-VEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDA 145 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDv 145 (299)
.++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.|++.+... ..+++++.+|+.++.. +++||+
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-----~~~v~~~~~d~~~~~~---~~~fD~ 92 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLL-----PYDSEFLEGDATEIEL---NDKYDI 92 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSS-----SSEEEEEESCTTTCCC---SSCEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhc-----CCceEEEEcchhhcCc---CCCeeE
Confidence 4678999999999999999997533 478999999999999999987643 3489999999887432 468999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCC
Q 037807 146 IIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAES 185 (299)
Q Consensus 146 Ii~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s 185 (299)
|++...-...+. ...+++.+++.|+|||.+++...+
T Consensus 93 v~~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 93 AICHAFLLHMTT----PETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp EEEESCGGGCSS----HHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEECChhhcCCC----HHHHHHHHHHHcCCCCEEEEEecc
Confidence 999654221111 168999999999999999986544
No 104
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.32 E-value=5.3e-12 Score=110.12 Aligned_cols=103 Identities=17% Similarity=0.181 Sum_probs=81.9
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHH--hcCCCCcc
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLK--TVQSGTFD 144 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~--~~~~~~fD 144 (299)
.+..+|||||||+|.++..+++..+..+|++||+++.+++.++++... .++++++.+|+.+... .. .++||
T Consensus 73 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~------~~~v~~~~~d~~~~~~~~~~-~~~~D 145 (230)
T 1fbn_A 73 KRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAE------RENIIPILGDANKPQEYANI-VEKVD 145 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTT------CTTEEEEECCTTCGGGGTTT-SCCEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhc------CCCeEEEECCCCCccccccc-CccEE
Confidence 456799999999999999999874457899999999999999988653 3689999999876211 11 36899
Q ss_pred EEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 145 AIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 145 vIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
+|+.+..++. ....+++.+.+.|+|||.+++.
T Consensus 146 ~v~~~~~~~~------~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 146 VIYEDVAQPN------QAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EEEECCCSTT------HHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEecCChh------HHHHHHHHHHHhCCCCcEEEEE
Confidence 9997765431 1256799999999999999884
No 105
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.32 E-value=7.2e-12 Score=118.29 Aligned_cols=127 Identities=15% Similarity=0.095 Sum_probs=95.6
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhc--CCCCccE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTV--QSGTFDA 145 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~--~~~~fDv 145 (299)
..++|||+|||+|.++..+++. +..+|++||+++.+++.|++++..++ + +++++++.+|+.+++... ..++||+
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n~--~-~~~v~~~~~d~~~~~~~~~~~~~~fD~ 292 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNG--V-EDRMKFIVGSAFEEMEKLQKKGEKFDI 292 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTT--C-GGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcC--C-CccceEEECCHHHHHHHHHhhCCCCCE
Confidence 5689999999999999999987 45789999999999999999987652 1 238999999999887642 1468999
Q ss_pred EEEcCCCCCCCCCCCC-----cHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHH
Q 037807 146 IIIDAFDPIRPGHDLF-----EGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLID 198 (299)
Q Consensus 146 Ii~D~~~~~~~~~~l~-----t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~ 198 (299)
|++|++........+. ..+++..+.+.|+|||++++.+.+.....+.+..++.
T Consensus 293 Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~v~ 350 (396)
T 2as0_A 293 VVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVDLQMFKDMII 350 (396)
T ss_dssp EEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSCHHHHHHHHH
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCCCHHHHHHHHH
Confidence 9999764321111111 2567889999999999998877665555554444443
No 106
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.31 E-value=5.5e-12 Score=114.13 Aligned_cols=108 Identities=15% Similarity=0.124 Sum_probs=84.1
Q ss_pred CCCCeEEEEeccccHHHHHHHhcC-CccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhc----CCC
Q 037807 67 PNPKKVLLIGGGDGGILREISRHA-SVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTV----QSG 141 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~----~~~ 141 (299)
.++.+|||||||+|..+..+++.. +..+|++||+++.+++.|++.+.... ...++++++.+|+.++.... ..+
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~~~~~ 112 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSP--DTYKNVSFKISSSDDFKFLGADSVDKQ 112 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC---CCTTEEEEECCTTCCGGGCTTTTTSS
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcc--CCCCceEEEEcCHHhCCccccccccCC
Confidence 467899999999999999999742 56799999999999999999876530 02478999999987643211 017
Q ss_pred CccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEE
Q 037807 142 TFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCI 181 (299)
Q Consensus 142 ~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~ 181 (299)
+||+|++...-... --..+++.++++|+|||.+++
T Consensus 113 ~fD~V~~~~~l~~~-----~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 113 KIDMITAVECAHWF-----DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp CEEEEEEESCGGGS-----CHHHHHHHHHHHEEEEEEEEE
T ss_pred CeeEEeHhhHHHHh-----CHHHHHHHHHHhcCCCcEEEE
Confidence 89999986432221 137899999999999999987
No 107
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.30 E-value=4.3e-12 Score=110.43 Aligned_cols=100 Identities=14% Similarity=0.186 Sum_probs=80.8
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAII 147 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi 147 (299)
++.+|||||||+|..+..+++.. .+|++||+++.+++.|++.++ . +++++.+|+.+.. ++++||+|+
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~-------~-~v~~~~~d~~~~~---~~~~fD~v~ 108 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHF--NDITCVEASEEAISHAQGRLK-------D-GITYIHSRFEDAQ---LPRRYDNIV 108 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTC--SCEEEEESCHHHHHHHHHHSC-------S-CEEEEESCGGGCC---CSSCEEEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHhC--CcEEEEeCCHHHHHHHHHhhh-------C-CeEEEEccHHHcC---cCCcccEEE
Confidence 56789999999999999998864 379999999999999999864 2 8999999988762 367899999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHH-HhcCCCcEEEEecC
Q 037807 148 IDAFDPIRPGHDLFEGPFFELVA-KALRPGGAMCIQAE 184 (299)
Q Consensus 148 ~D~~~~~~~~~~l~t~ef~~~~~-~~LkpgGvlv~~~~ 184 (299)
+...-...+. ...+++.++ +.|+|||.+++...
T Consensus 109 ~~~~l~~~~~----~~~~l~~~~~~~LkpgG~l~i~~~ 142 (250)
T 2p7i_A 109 LTHVLEHIDD----PVALLKRINDDWLAEGGRLFLVCP 142 (250)
T ss_dssp EESCGGGCSS----HHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred EhhHHHhhcC----HHHHHHHHHHHhcCCCCEEEEEcC
Confidence 8542211111 168999999 99999999998663
No 108
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.30 E-value=3.6e-12 Score=112.15 Aligned_cols=106 Identities=23% Similarity=0.272 Sum_probs=82.7
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
++..+|||||||+|.++..+++..+ .+|+++|+++.+++.|++.+...+ + .++++++.+|+.+... +++||+|
T Consensus 35 ~~~~~VLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~l~~a~~~~~~~~--~-~~~v~~~~~d~~~~~~---~~~fD~V 107 (256)
T 1nkv_A 35 KPGTRILDLGSGSGEMLCTWARDHG-ITGTGIDMSSLFTAQAKRRAEELG--V-SERVHFIHNDAAGYVA---NEKCDVA 107 (256)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHTC-CEEEEEESCHHHHHHHHHHHHHTT--C-TTTEEEEESCCTTCCC---SSCEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhcC-CeEEEEeCCHHHHHHHHHHHHhcC--C-CcceEEEECChHhCCc---CCCCCEE
Confidence 4568999999999999999998643 589999999999999999876532 1 3589999999876532 5789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++...-...+. ...+++.+++.|||||.+++..
T Consensus 108 ~~~~~~~~~~~----~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 108 ACVGATWIAGG----FAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp EEESCGGGTSS----SHHHHHHHTTSEEEEEEEEEEE
T ss_pred EECCChHhcCC----HHHHHHHHHHHcCCCeEEEEec
Confidence 98332211111 2789999999999999998854
No 109
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.30 E-value=8.2e-12 Score=107.35 Aligned_cols=113 Identities=14% Similarity=0.146 Sum_probs=85.2
Q ss_pred hHHHHHHhhcccCCCCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHH
Q 037807 53 AYQEMITHLPLCSIPNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGS 132 (299)
Q Consensus 53 ~Y~e~l~~~~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~ 132 (299)
.|.+++..+.. .++.+|||||||+|..+..+++.. .+|+++|+++.+++.+++.++ .+++++.+|+.
T Consensus 33 ~~~~~l~~~~~---~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~--------~~~~~~~~d~~ 99 (220)
T 3hnr_A 33 HYEDILEDVVN---KSFGNVLEFGVGTGNLTNKLLLAG--RTVYGIEPSREMRMIAKEKLP--------KEFSITEGDFL 99 (220)
T ss_dssp THHHHHHHHHH---TCCSEEEEECCTTSHHHHHHHHTT--CEEEEECSCHHHHHHHHHHSC--------TTCCEESCCSS
T ss_pred HHHHHHHHhhc---cCCCeEEEeCCCCCHHHHHHHhCC--CeEEEEeCCHHHHHHHHHhCC--------CceEEEeCChh
Confidence 34556555433 357899999999999999999873 589999999999999999764 47889999987
Q ss_pred HHHHhcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 133 EYLKTVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 133 ~~l~~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++.. .++||+|++...-...+.. ....+++.+++.|+|||.+++..
T Consensus 100 ~~~~---~~~fD~v~~~~~l~~~~~~--~~~~~l~~~~~~LkpgG~l~i~~ 145 (220)
T 3hnr_A 100 SFEV---PTSIDTIVSTYAFHHLTDD--EKNVAIAKYSQLLNKGGKIVFAD 145 (220)
T ss_dssp SCCC---CSCCSEEEEESCGGGSCHH--HHHHHHHHHHHHSCTTCEEEEEE
T ss_pred hcCC---CCCeEEEEECcchhcCChH--HHHHHHHHHHHhcCCCCEEEEEe
Confidence 6432 3789999986432211110 01338999999999999999864
No 110
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.30 E-value=6.6e-12 Score=118.21 Aligned_cols=108 Identities=19% Similarity=0.237 Sum_probs=86.5
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAII 147 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi 147 (299)
+..+|||+|||+|.++..+++.. .+|++||+|+.+++.|++++... ..+++++.+|+.+.... .++||+|+
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g--~~V~gvDis~~al~~A~~n~~~~-----~~~v~~~~~D~~~~~~~--~~~fD~Ii 303 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMG--AEVVGVEDDLASVLSLQKGLEAN-----ALKAQALHSDVDEALTE--EARFDIIV 303 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTT--CEEEEEESBHHHHHHHHHHHHHT-----TCCCEEEECSTTTTSCT--TCCEEEEE
T ss_pred CCCEEEEEeeeCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHc-----CCCeEEEEcchhhcccc--CCCeEEEE
Confidence 56799999999999999999873 58999999999999999998764 23589999999876542 47899999
Q ss_pred EcCCCCCCCCCC-CCcHHHHHHHHHhcCCCcEEEEecC
Q 037807 148 IDAFDPIRPGHD-LFEGPFFELVAKALRPGGAMCIQAE 184 (299)
Q Consensus 148 ~D~~~~~~~~~~-l~t~ef~~~~~~~LkpgGvlv~~~~ 184 (299)
++.+-..+.... -....+++.+.+.|+|||.+++.+.
T Consensus 304 ~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n 341 (381)
T 3dmg_A 304 TNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSN 341 (381)
T ss_dssp ECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEc
Confidence 987654322111 1135789999999999999998653
No 111
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.30 E-value=2.4e-12 Score=110.60 Aligned_cols=107 Identities=16% Similarity=0.140 Sum_probs=84.4
Q ss_pred CCCCeEEEEeccccHHHHHHHhcC-CccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHA-SVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDA 145 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDv 145 (299)
.+..+|||||||+|..+..+++.. +..+|++||+++.+++.+++.+... ..++++++.+|+.+.. .++++||+
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~~d~~~~~--~~~~~fD~ 109 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKL----GLKNVEVLKSEENKIP--LPDNTVDF 109 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHH----TCTTEEEEECBTTBCS--SCSSCEEE
T ss_pred CCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHc----CCCcEEEEecccccCC--CCCCCeeE
Confidence 456799999999999999998863 4568999999999999999988765 2348999999987643 23578999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 146 IIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 146 Ii~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
|++...-...+. ...+++.+.+.|+|||.+++..
T Consensus 110 v~~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~i~~ 143 (219)
T 3dh0_A 110 IFMAFTFHELSE----PLKFLEELKRVAKPFAYLAIID 143 (219)
T ss_dssp EEEESCGGGCSS----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEeehhhhhcCC----HHHHHHHHHHHhCCCeEEEEEE
Confidence 998643221111 2789999999999999998853
No 112
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.29 E-value=6.7e-12 Score=109.91 Aligned_cols=105 Identities=16% Similarity=0.149 Sum_probs=83.1
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
++..+|||||||+|..+..+++.. .+|+++|+++.+++.+++.+... ..++++++.+|+.+.. .++++||+|
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~----~~~~v~~~~~d~~~~~--~~~~~fD~v 91 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSPYV--QECIGVDATKEMVEVASSFAQEK----GVENVRFQQGTAESLP--FPDDSFDII 91 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHH----TCCSEEEEECBTTBCC--SCTTCEEEE
T ss_pred CCCCEEEEEccCcCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHc----CCCCeEEEecccccCC--CCCCcEEEE
Confidence 467899999999999999998874 48999999999999999987654 2357999999986632 225789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++...-...+. ...+++.++++|+|||.+++..
T Consensus 92 ~~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 92 TCRYAAHHFSD----VRKAVREVARVLKQDGRFLLVD 124 (239)
T ss_dssp EEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCchhhccC----HHHHHHHHHHHcCCCcEEEEEE
Confidence 98643221111 2789999999999999998854
No 113
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.29 E-value=6.7e-12 Score=105.86 Aligned_cols=105 Identities=15% Similarity=0.136 Sum_probs=81.8
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.++.+|||||||+|..+..+++.. .+|+++|+++.+++.+++.+... ..++++++.+|+.+... .++||+|
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~~d~~~~~~---~~~~D~v 101 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAANG--YDVDAWDKNAMSIANVERIKSIE----NLDNLHTRVVDLNNLTF---DRQYDFI 101 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHH----TCTTEEEEECCGGGCCC---CCCEEEE
T ss_pred cCCCeEEEEcCCCCHHHHHHHHCC--CeEEEEECCHHHHHHHHHHHHhC----CCCCcEEEEcchhhCCC---CCCceEE
Confidence 356799999999999999999873 58999999999999999987654 23479999999876432 5789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
++...-...+.. -...+++.+.+.|+|||.+++.
T Consensus 102 ~~~~~l~~~~~~--~~~~~l~~~~~~L~~gG~l~~~ 135 (199)
T 2xvm_A 102 LSTVVLMFLEAK--TIPGLIANMQRCTKPGGYNLIV 135 (199)
T ss_dssp EEESCGGGSCGG--GHHHHHHHHHHTEEEEEEEEEE
T ss_pred EEcchhhhCCHH--HHHHHHHHHHHhcCCCeEEEEE
Confidence 986532211110 1267999999999999997653
No 114
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.29 E-value=2.3e-11 Score=122.93 Aligned_cols=114 Identities=15% Similarity=0.165 Sum_probs=90.2
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAII 147 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi 147 (299)
+.++|||+|||+|+++..+++. +..+|++||+|+.+++.|++++..++ ++..+++++.+|+.+++... .++||+|+
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~-ga~~V~aVD~s~~al~~a~~N~~~ng--l~~~~v~~i~~D~~~~l~~~-~~~fD~Ii 614 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLG-GARSTTTVDMSRTYLEWAERNLRLNG--LTGRAHRLIQADCLAWLREA-NEQFDLIF 614 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTT--CCSTTEEEEESCHHHHHHHC-CCCEEEEE
T ss_pred CCCcEEEeeechhHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcC--CCccceEEEecCHHHHHHhc-CCCccEEE
Confidence 5689999999999999999885 45789999999999999999987652 23358999999999998865 68999999
Q ss_pred EcCCCCCCCC--CCCC-----cHHHHHHHHHhcCCCcEEEEecCC
Q 037807 148 IDAFDPIRPG--HDLF-----EGPFFELVAKALRPGGAMCIQAES 185 (299)
Q Consensus 148 ~D~~~~~~~~--~~l~-----t~ef~~~~~~~LkpgGvlv~~~~s 185 (299)
+|++.-.... ...+ -.++++.+.+.|+|||+|++.+.+
T Consensus 615 ~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 615 IDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp ECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 9986522110 1111 146788889999999999987654
No 115
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.29 E-value=1.7e-11 Score=109.99 Aligned_cols=105 Identities=12% Similarity=0.131 Sum_probs=81.2
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
++..+|||||||+|..+..+++..+ .+|++||+++.+++.+++.+...+ -.++++++.+|+.++ +++||+|
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvd~s~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~-----~~~fD~v 133 (287)
T 1kpg_A 63 QPGMTLLDVGCGWGATMMRAVEKYD-VNVVGLTLSKNQANHVQQLVANSE---NLRSKRVLLAGWEQF-----DEPVDRI 133 (287)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHTCC---CCSCEEEEESCGGGC-----CCCCSEE
T ss_pred CCcCEEEEECCcccHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHhcC---CCCCeEEEECChhhC-----CCCeeEE
Confidence 4567999999999999999995433 389999999999999999876431 135899999998543 3789999
Q ss_pred EEcCC-CCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAF-DPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~-~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++... ...... ....+++.+.+.|||||.+++..
T Consensus 134 ~~~~~l~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 134 VSIGAFEHFGHE---RYDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp EEESCGGGTCTT---THHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEeCchhhcChH---HHHHHHHHHHHhcCCCCEEEEEE
Confidence 98532 111111 12789999999999999999865
No 116
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.29 E-value=8.8e-12 Score=113.77 Aligned_cols=115 Identities=17% Similarity=0.109 Sum_probs=78.2
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCC--CCCEEEEEccH------HHHHHhc
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYE--DSRVILHVCDG------SEYLKTV 138 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~--~~rv~v~~~D~------~~~l~~~ 138 (299)
+...+|||||||+|..+..+++.. ..+|++||+++.+++.|++.......... ..+++++++|. .+.....
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~~-~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYGE-IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CCCCeEEEEecCCcHhHHHHHhcC-CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc
Confidence 346899999999998766666543 46899999999999999998764311000 01367778877 3222222
Q ss_pred CCCCccEEEEcCCCCCC-CCCCCCcHHHHHHHHHhcCCCcEEEEecC
Q 037807 139 QSGTFDAIIIDAFDPIR-PGHDLFEGPFFELVAKALRPGGAMCIQAE 184 (299)
Q Consensus 139 ~~~~fDvIi~D~~~~~~-~~~~l~t~ef~~~~~~~LkpgGvlv~~~~ 184 (299)
++++||+|++-..-... ...+ ...+++.++++|||||+|++.+.
T Consensus 126 ~~~~FD~V~~~~~lhy~~~~~~--~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 126 YFGKFNIIDWQFAIHYSFHPRH--YATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp CSSCEEEEEEESCGGGTCSTTT--HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCCeeEEEECchHHHhCCHHH--HHHHHHHHHHHcCCCCEEEEEeC
Confidence 35789999975422111 1111 26899999999999999998653
No 117
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.28 E-value=2.6e-10 Score=100.24 Aligned_cols=127 Identities=14% Similarity=0.090 Sum_probs=94.2
Q ss_pred CCCCCeEEEEeccccHHHHHHHhc-CCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHh-cCCCCc
Q 037807 66 IPNPKKVLLIGGGDGGILREISRH-ASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKT-VQSGTF 143 (299)
Q Consensus 66 ~~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~~f 143 (299)
.++..+||+||||+|.++..+++. .+..+|++||+++++++.+++.... .+++..+.+|....... ...+.+
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~------~~ni~~V~~d~~~p~~~~~~~~~v 148 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRD------RRNIFPILGDARFPEKYRHLVEGV 148 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTT------CTTEEEEESCTTCGGGGTTTCCCE
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHh------hcCeeEEEEeccCccccccccceE
Confidence 346789999999999999999985 3457899999999999999987653 46899999998653221 125789
Q ss_pred cEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecC--Cc---ccchHHHHHHHHHHhhh-c
Q 037807 144 DAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAE--SL---WFQQFSVQHLIDDCHRI-F 204 (299)
Q Consensus 144 DvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~--s~---~~~~~~~~~~~~~l~~~-F 204 (299)
|+|++|...+.. ...++.++++.|||||.+++... +. ......+++..+.|++. |
T Consensus 149 DvVf~d~~~~~~------~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF 209 (233)
T 4df3_A 149 DGLYADVAQPEQ------AAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGL 209 (233)
T ss_dssp EEEEECCCCTTH------HHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTC
T ss_pred EEEEEeccCChh------HHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCC
Confidence 999998776532 26789999999999999887421 10 11224566667777653 6
No 118
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.28 E-value=9.8e-12 Score=108.26 Aligned_cols=103 Identities=17% Similarity=0.227 Sum_probs=82.0
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAII 147 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi 147 (299)
+..+|||||||+|..+..+++.. ..+|+++|+++.+++.+++.+. ..+++++.+|+.+.. .+.++||+|+
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~~d~~~~~--~~~~~fD~v~ 112 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHG-ASYVLGLDLSEKMLARARAAGP-------DTGITYERADLDKLH--LPQDSFDLAY 112 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHTSC-------SSSEEEEECCGGGCC--CCTTCEEEEE
T ss_pred CCCEEEEEcCcCCHHHHHHHHCC-CCeEEEEcCCHHHHHHHHHhcc-------cCCceEEEcChhhcc--CCCCCceEEE
Confidence 56899999999999999998874 3489999999999999998864 247999999987643 2257899999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecC
Q 037807 148 IDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAE 184 (299)
Q Consensus 148 ~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~ 184 (299)
+...-...+. ...+++.+++.|+|||.+++...
T Consensus 113 ~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 113 SSLALHYVED----VARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp EESCGGGCSC----HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred Eeccccccch----HHHHHHHHHHhcCcCcEEEEEeC
Confidence 8543221111 26899999999999999998653
No 119
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.28 E-value=3e-11 Score=113.22 Aligned_cols=104 Identities=18% Similarity=0.213 Sum_probs=81.7
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAII 147 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi 147 (299)
++++||||| |+|.++.++++..+..+|++||+|+.+++.|++++...+ + .+++++.+|+.+.+....+++||+|+
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g--~--~~v~~~~~D~~~~l~~~~~~~fD~Vi 246 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIG--Y--EDIEIFTFDLRKPLPDYALHKFDTFI 246 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHT--C--CCEEEECCCTTSCCCTTTSSCBSEEE
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC--C--CCEEEEEChhhhhchhhccCCccEEE
Confidence 468999999 999999999887544689999999999999999987652 2 28999999998754321146899999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHHhcCCCc-EEEE
Q 037807 148 IDAFDPIRPGHDLFEGPFFELVAKALRPGG-AMCI 181 (299)
Q Consensus 148 ~D~~~~~~~~~~l~t~ef~~~~~~~LkpgG-vlv~ 181 (299)
+|++.... . ...|++.+.+.|+||| ++++
T Consensus 247 ~~~p~~~~---~--~~~~l~~~~~~LkpgG~~~~~ 276 (373)
T 2qm3_A 247 TDPPETLE---A--IRAFVGRGIATLKGPRCAGYF 276 (373)
T ss_dssp ECCCSSHH---H--HHHHHHHHHHTBCSTTCEEEE
T ss_pred ECCCCchH---H--HHHHHHHHHHHcccCCeEEEE
Confidence 99753211 1 2789999999999999 3344
No 120
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.27 E-value=5.9e-12 Score=111.01 Aligned_cols=106 Identities=23% Similarity=0.226 Sum_probs=82.9
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.++.+|||||||+|..+..+++.. ..+|++||+++.+++.+++.+.. .++++++.+|+.+.. .++++||+|
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~------~~~~~~~~~d~~~~~--~~~~~fD~v 124 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSG------NNKIIFEANDILTKE--FPENNFDLI 124 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCS------CTTEEEEECCTTTCC--CCTTCEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhc------CCCeEEEECccccCC--CCCCcEEEE
Confidence 456799999999999999999863 36899999999999999998753 278999999987642 236789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++...-...+.. -...+++.+++.|+|||.+++..
T Consensus 125 ~~~~~l~~~~~~--~~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 125 YSRDAILALSLE--NKNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp EEESCGGGSCHH--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eHHHHHHhcChH--HHHHHHHHHHHHcCCCCEEEEEE
Confidence 985432211000 12678999999999999999865
No 121
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.27 E-value=1.9e-11 Score=104.84 Aligned_cols=101 Identities=20% Similarity=0.274 Sum_probs=80.2
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHh--cCCCCccE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKT--VQSGTFDA 145 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~--~~~~~fDv 145 (299)
.+.+|||||||+|..+..+++.. .+|+++|+++.+++.+++. .+++++.+|+.+.... ....+||+
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~----------~~~~~~~~~~~~~~~~~~~~~~~fD~ 119 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADRG--IEAVGVDGDRTLVDAARAA----------GAGEVHLASYAQLAEAKVPVGKDYDL 119 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTTT--CEEEEEESCHHHHHHHHHT----------CSSCEEECCHHHHHTTCSCCCCCEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHCC--CEEEEEcCCHHHHHHHHHh----------cccccchhhHHhhcccccccCCCccE
Confidence 56899999999999999999873 4899999999999999986 3567888998886322 12456999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCC
Q 037807 146 IIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAES 185 (299)
Q Consensus 146 Ii~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s 185 (299)
|++...-. ... ...+++.+++.|+|||.+++...+
T Consensus 120 v~~~~~l~-~~~----~~~~l~~~~~~L~pgG~l~~~~~~ 154 (227)
T 3e8s_A 120 ICANFALL-HQD----IIELLSAMRTLLVPGGALVIQTLH 154 (227)
T ss_dssp EEEESCCC-SSC----CHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEECchhh-hhh----HHHHHHHHHHHhCCCeEEEEEecC
Confidence 99865433 111 278999999999999999987643
No 122
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.27 E-value=6.3e-12 Score=109.47 Aligned_cols=106 Identities=21% Similarity=0.254 Sum_probs=81.6
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
++..+|||||||+|..+..+++. .+|+++|+++.+++.|++.+... ..+++++.+|+.++. . .++||+|
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~~--~-~~~fD~v 100 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMET-----NRHVDFWVQDMRELE--L-PEPVDAI 100 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHT-----TCCCEEEECCGGGCC--C-SSCEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhc-----CCceEEEEcChhhcC--C-CCCcCEE
Confidence 34589999999999999999876 58999999999999999987653 357999999987642 2 4789999
Q ss_pred EEcC--CCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCC
Q 037807 147 IIDA--FDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAES 185 (299)
Q Consensus 147 i~D~--~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s 185 (299)
++.. ........ -...+++.+.+.|+|||++++...+
T Consensus 101 ~~~~~~~~~~~~~~--~~~~~l~~~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 101 TILCDSLNYLQTEA--DVKQTFDSAARLLTDGGKLLFDVHS 139 (243)
T ss_dssp EECTTGGGGCCSHH--HHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEeCCchhhcCCHH--HHHHHHHHHHHhcCCCeEEEEEcCC
Confidence 9853 22110000 1256899999999999999986533
No 123
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.27 E-value=1e-11 Score=105.91 Aligned_cols=108 Identities=13% Similarity=0.237 Sum_probs=82.0
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
++..+|||||||+|.++..+++.. ..+|+++|+++.+++.+++.+.. .++++++.+|+.+.- .++++||+|
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~-~~~v~~~D~s~~~~~~a~~~~~~------~~~i~~~~~d~~~~~--~~~~~fD~v 111 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGG-FPNVTSVDYSSVVVAAMQACYAH------VPQLRWETMDVRKLD--FPSASFDVV 111 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTT-CCCEEEEESCHHHHHHHHHHTTT------CTTCEEEECCTTSCC--SCSSCEEEE
T ss_pred CCCCeEEEECCCCcHHHHHHHHcC-CCcEEEEeCCHHHHHHHHHhccc------CCCcEEEEcchhcCC--CCCCcccEE
Confidence 457899999999999999999874 34899999999999999998752 368999999987641 235789999
Q ss_pred EEcCCC---------CCCCCC--CCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFD---------PIRPGH--DLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~---------~~~~~~--~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++...- ++.... .--...+++.+.+.|+|||.+++..
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 159 (215)
T 2pxx_A 112 LEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMT 159 (215)
T ss_dssp EEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEe
Confidence 975321 110000 0012678999999999999999865
No 124
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.27 E-value=1.4e-11 Score=110.17 Aligned_cols=119 Identities=16% Similarity=0.222 Sum_probs=91.7
Q ss_pred CCCCeEEEEeccccHHHHHHHhc-CCccEEEEEECCHHHHHHHHhhchhh-hcCCCCCCEEEEEccHHHHHHhcCCCCcc
Q 037807 67 PNPKKVLLIGGGDGGILREISRH-ASVEQIHICEIDTMLINVYKEYFPEI-AIGYEDSRVILHVCDGSEYLKTVQSGTFD 144 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~-~~~~~~~rv~v~~~D~~~~l~~~~~~~fD 144 (299)
.+..+|||+|||+|.++..+++. .+..+|+++|+++.+++.|++++... +. -.++++++.+|+.+... +++.||
T Consensus 98 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~--~~~~v~~~~~d~~~~~~--~~~~~D 173 (280)
T 1i9g_A 98 FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQ--PPDNWRLVVSDLADSEL--PDGSVD 173 (280)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTS--CCTTEEEECSCGGGCCC--CTTCEE
T ss_pred CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC--CCCcEEEEECchHhcCC--CCCcee
Confidence 45679999999999999999984 33568999999999999999987643 10 13589999999876521 256899
Q ss_pred EEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhh
Q 037807 145 AIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHR 202 (299)
Q Consensus 145 vIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~ 202 (299)
+|+++.+++ .++++.+.+.|+|||.+++...+ .+.+..+...+++
T Consensus 174 ~v~~~~~~~---------~~~l~~~~~~L~pgG~l~~~~~~----~~~~~~~~~~l~~ 218 (280)
T 1i9g_A 174 RAVLDMLAP---------WEVLDAVSRLLVAGGVLMVYVAT----VTQLSRIVEALRA 218 (280)
T ss_dssp EEEEESSCG---------GGGHHHHHHHEEEEEEEEEEESS----HHHHHHHHHHHHH
T ss_pred EEEECCcCH---------HHHHHHHHHhCCCCCEEEEEeCC----HHHHHHHHHHHHh
Confidence 999987755 57899999999999999986533 2334555565654
No 125
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.27 E-value=1.1e-11 Score=105.40 Aligned_cols=100 Identities=14% Similarity=0.084 Sum_probs=80.2
Q ss_pred CCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEEE
Q 037807 69 PKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAIII 148 (299)
Q Consensus 69 ~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi~ 148 (299)
+.+|||||||+|..+..+++.. .+|++||+++.+++.+++.. ++++++.+|+.++- .++++||+|++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~---------~~~~~~~~d~~~~~--~~~~~fD~v~~ 108 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLG--HQIEGLEPATRLVELARQTH---------PSVTFHHGTITDLS--DSPKRWAGLLA 108 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTT--CCEEEECCCHHHHHHHHHHC---------TTSEEECCCGGGGG--GSCCCEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhcC--CeEEEEeCCHHHHHHHHHhC---------CCCeEEeCcccccc--cCCCCeEEEEe
Confidence 6799999999999999999873 48999999999999999874 47899999987753 23689999999
Q ss_pred cCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 149 DAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 149 D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
...-...+.. -...+++.+++.|+|||.+++..
T Consensus 109 ~~~l~~~~~~--~~~~~l~~~~~~L~pgG~l~i~~ 141 (203)
T 3h2b_A 109 WYSLIHMGPG--ELPDALVALRMAVEDGGGLLMSF 141 (203)
T ss_dssp ESSSTTCCTT--THHHHHHHHHHTEEEEEEEEEEE
T ss_pred hhhHhcCCHH--HHHHHHHHHHHHcCCCcEEEEEE
Confidence 5433222111 12789999999999999999865
No 126
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.27 E-value=4.6e-11 Score=107.28 Aligned_cols=116 Identities=16% Similarity=0.171 Sum_probs=88.3
Q ss_pred CCCCeEEEEeccccHHHHHHHhc-CCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhc--CCCCc
Q 037807 67 PNPKKVLLIGGGDGGILREISRH-ASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTV--QSGTF 143 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~--~~~~f 143 (299)
.+..+|||+|||+|+.+..+++. ++..+|+++|+++.+++.+++++...+ -++++++.+|+.++.... ..++|
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g----~~~v~~~~~D~~~~~~~~~~~~~~f 157 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMG----VLNTIIINADMRKYKDYLLKNEIFF 157 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEESCHHHHHHHHHHTTCCE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhC----CCcEEEEeCChHhcchhhhhccccC
Confidence 35679999999999999999874 344789999999999999999887652 248999999998876421 14689
Q ss_pred cEEEEcCCCCC-CCCC-------------CCCcHHHHHHHHHhcCCCcEEEEecCCc
Q 037807 144 DAIIIDAFDPI-RPGH-------------DLFEGPFFELVAKALRPGGAMCIQAESL 186 (299)
Q Consensus 144 DvIi~D~~~~~-~~~~-------------~l~t~ef~~~~~~~LkpgGvlv~~~~s~ 186 (299)
|+|++|++... +.-. .-...++++.+.+.|||||.++..+.+.
T Consensus 158 D~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 158 DKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp EEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 99999976432 1100 0123678999999999999999876544
No 127
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.27 E-value=8.4e-12 Score=117.20 Aligned_cols=109 Identities=15% Similarity=0.100 Sum_probs=84.3
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.+.++|||||||+|.++..+++. +..+|++||++ .+++.|++++...+ + ..+++++.+|+.++.. +++||+|
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~-g~~~V~gvD~s-~~~~~a~~~~~~~~--~-~~~v~~~~~d~~~~~~---~~~~D~I 133 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQA-GARKVYAVEAT-KMADHARALVKANN--L-DHIVEVIEGSVEDISL---PEKVDVI 133 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHT-TCSEEEEEESS-TTHHHHHHHHHHTT--C-TTTEEEEESCGGGCCC---SSCEEEE
T ss_pred CCCCEEEEeccCcCHHHHHHHhc-CCCEEEEEccH-HHHHHHHHHHHHcC--C-CCeEEEEECchhhcCc---CCcceEE
Confidence 45789999999999999999987 45699999999 99999999876542 1 3579999999877532 3789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecC
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAE 184 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~ 184 (299)
+++.......... ....+++.+.+.|+|||+++....
T Consensus 134 v~~~~~~~l~~e~-~~~~~l~~~~~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 134 ISEWMGYFLLRES-MFDSVISARDRWLKPTGVMYPSHA 170 (376)
T ss_dssp EECCCBTTBTTTC-THHHHHHHHHHHEEEEEEEESSEE
T ss_pred EEcChhhcccchH-HHHHHHHHHHhhCCCCeEEEEecC
Confidence 9976332211111 126689999999999999987543
No 128
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.27 E-value=9.9e-12 Score=116.86 Aligned_cols=113 Identities=17% Similarity=0.164 Sum_probs=86.3
Q ss_pred CCCCeEEEEeccccHHHHHHHhcC-CccEEEEEECCHHHHHHHHhhchhhh----cCCCCCCEEEEEccHHHHHH----h
Q 037807 67 PNPKKVLLIGGGDGGILREISRHA-SVEQIHICEIDTMLINVYKEYFPEIA----IGYEDSRVILHVCDGSEYLK----T 137 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~----~~~~~~rv~v~~~D~~~~l~----~ 137 (299)
.++.+|||||||+|..+..+++.. +..+|++||+++.+++.|++++.... +.+..++++++.+|+.+... .
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 356899999999999999998752 34689999999999999999875431 11345799999999877521 1
Q ss_pred cCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 138 VQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 138 ~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
.++++||+|++...-...+. ...+++.+++.|||||.|++..
T Consensus 162 ~~~~~fD~V~~~~~l~~~~d----~~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLSTN----KLALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp CCTTCEEEEEEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCEEEEEEccchhcCCC----HHHHHHHHHHHcCCCCEEEEEE
Confidence 23578999998654322211 2789999999999999998853
No 129
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.26 E-value=1.3e-11 Score=107.51 Aligned_cols=102 Identities=21% Similarity=0.181 Sum_probs=82.1
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
++..+|||||||+|..+..+++.. .+|++||+++.+++.+++... .++++++.+|+.+.. .++++||+|
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~~d~~~~~--~~~~~fD~v 120 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRTG--YKAVGVDISEVMIQKGKERGE-------GPDLSFIKGDLSSLP--FENEQFEAI 120 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHTTTC-------BTTEEEEECBTTBCS--SCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHcC--CeEEEEECCHHHHHHHHhhcc-------cCCceEEEcchhcCC--CCCCCccEE
Confidence 467899999999999999999873 489999999999999998752 468999999987642 236789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++...-...+. ...+++.+++.|+|||.+++..
T Consensus 121 ~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~i~~ 153 (242)
T 3l8d_A 121 MAINSLEWTEE----PLRALNEIKRVLKSDGYACIAI 153 (242)
T ss_dssp EEESCTTSSSC----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcChHhhccC----HHHHHHHHHHHhCCCeEEEEEE
Confidence 98543322111 2689999999999999998865
No 130
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.26 E-value=5.4e-12 Score=111.07 Aligned_cols=102 Identities=14% Similarity=0.156 Sum_probs=82.1
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.++.+|||||||+|..+..+++..+..+|+++|+++.+++.+++.. ++++++.+|+.++. ++++||+|
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~---------~~~~~~~~d~~~~~---~~~~fD~v 99 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL---------PNTNFGKADLATWK---PAQKADLL 99 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS---------TTSEEEECCTTTCC---CSSCEEEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC---------CCcEEEECChhhcC---ccCCcCEE
Confidence 4568999999999999999987633568999999999999999872 47899999987654 26789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecC
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAE 184 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~ 184 (299)
++...-...+. ...+++.+++.|+|||.+++...
T Consensus 100 ~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~~~~~ 133 (259)
T 2p35_A 100 YANAVFQWVPD----HLAVLSQLMDQLESGGVLAVQMP 133 (259)
T ss_dssp EEESCGGGSTT----HHHHHHHHGGGEEEEEEEEEEEE
T ss_pred EEeCchhhCCC----HHHHHHHHHHhcCCCeEEEEEeC
Confidence 98653322111 27789999999999999998763
No 131
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.26 E-value=1.3e-11 Score=108.80 Aligned_cols=103 Identities=17% Similarity=0.261 Sum_probs=82.2
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
+++.+|||||||+|..+..+++.. .+|+++|+++.+++.+++.+.. ..++++++.+|+.+.. .++++||+|
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~-----~~~~~~~~~~d~~~~~--~~~~~fD~v 108 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIARG--YRYIALDADAAMLEVFRQKIAG-----VDRKVQVVQADARAIP--LPDESVHGV 108 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTTT--CEEEEEESCHHHHHHHHHHTTT-----SCTTEEEEESCTTSCC--SCTTCEEEE
T ss_pred CCCCEEEEeCCcCCHHHHHHHHCC--CEEEEEECCHHHHHHHHHHhhc-----cCCceEEEEcccccCC--CCCCCeeEE
Confidence 457899999999999999999873 5899999999999999998721 2468999999986542 235789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
++...-...+. ...+++.+.+.|+|||.+++.
T Consensus 109 ~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 109 IVVHLWHLVPD----WPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp EEESCGGGCTT----HHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCchhhcCC----HHHHHHHHHHHCCCCcEEEEE
Confidence 98643222111 278999999999999999885
No 132
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.26 E-value=5.3e-12 Score=110.01 Aligned_cols=106 Identities=13% Similarity=0.102 Sum_probs=81.5
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAII 147 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi 147 (299)
++.+|||||||+|..+..+++. ..+|++||+++.+++.|++.+.... ...+++++.+|+.++. +.++||+|+
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~---~~~~fD~v~ 137 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASP--ERFVVGLDISESALAKANETYGSSP---KAEYFSFVKEDVFTWR---PTELFDLIF 137 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBT--TEEEEEECSCHHHHHHHHHHHTTSG---GGGGEEEECCCTTTCC---CSSCEEEEE
T ss_pred CCCCEEEeCCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHhhccC---CCcceEEEECchhcCC---CCCCeeEEE
Confidence 3469999999999999998774 3679999999999999999876421 1357999999988754 256899999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 148 IDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 148 ~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
+...-...+.. ....+++.+++.|+|||.+++..
T Consensus 138 ~~~~l~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~ 171 (235)
T 3lcc_A 138 DYVFFCAIEPE--MRPAWAKSMYELLKPDGELITLM 171 (235)
T ss_dssp EESSTTTSCGG--GHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EChhhhcCCHH--HHHHHHHHHHHHCCCCcEEEEEE
Confidence 85433221111 12678999999999999998743
No 133
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.26 E-value=1.5e-11 Score=110.05 Aligned_cols=100 Identities=16% Similarity=0.274 Sum_probs=79.6
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.++.+|||||||+|..+..+++ + ..+|+++|+++.+++.+++.+ ++++++.+|+.++. . +++||+|
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~-~-~~~v~gvD~s~~~~~~a~~~~---------~~~~~~~~d~~~~~--~-~~~fD~v 121 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQ-S-GAEVLGTDNAATMIEKARQNY---------PHLHFDVADARNFR--V-DKPLDAV 121 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHH-T-TCEEEEEESCHHHHHHHHHHC---------TTSCEEECCTTTCC--C-SSCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHh-C-CCeEEEEECCHHHHHHHHhhC---------CCCEEEECChhhCC--c-CCCcCEE
Confidence 3567999999999999999988 3 368999999999999999865 46788999987642 2 5789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecC
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAE 184 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~ 184 (299)
++...-...+. ...+++.+++.|+|||.+++...
T Consensus 122 ~~~~~l~~~~d----~~~~l~~~~~~LkpgG~l~~~~~ 155 (279)
T 3ccf_A 122 FSNAMLHWVKE----PEAAIASIHQALKSGGRFVAEFG 155 (279)
T ss_dssp EEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEcchhhhCcC----HHHHHHHHHHhcCCCcEEEEEec
Confidence 98643221111 26799999999999999998653
No 134
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.26 E-value=1.4e-11 Score=109.49 Aligned_cols=107 Identities=21% Similarity=0.260 Sum_probs=83.6
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.+..+|||||||+|..+..+++..+ .+|+++|+++.+++.+++.+...+ -.++++++.+|+.+.. .++++||+|
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~~--~~~~~fD~v 133 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATARD-VRVTGISISRPQVNQANARATAAG---LANRVTFSYADAMDLP--FEDASFDAV 133 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHSC-CEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEECCTTSCC--SCTTCEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhcC-CEEEEEeCCHHHHHHHHHHHHhcC---CCcceEEEECccccCC--CCCCCccEE
Confidence 4568999999999999999988643 689999999999999999876532 1358999999987632 225789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++...-...+. ...+++.+++.|+|||.+++..
T Consensus 134 ~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 134 WALESLHHMPD----RGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp EEESCTTTSSC----HHHHHHHHHTTEEEEEEEEEEE
T ss_pred EEechhhhCCC----HHHHHHHHHHHcCCCeEEEEEE
Confidence 98543222111 2789999999999999998865
No 135
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.26 E-value=6.5e-12 Score=112.91 Aligned_cols=115 Identities=15% Similarity=0.123 Sum_probs=83.2
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhc-CCCCccEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTV-QSGTFDAI 146 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~~fDvI 146 (299)
++.+|||||||+|..+..+++.. .+|++||+|+.+++.|++...........+++.+..+|+.+..... .+++||+|
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V 134 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEEG--FSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAV 134 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHCC--CeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEE
Confidence 56899999999999999999874 3899999999999999987532211111257899999988765221 35789999
Q ss_pred EEc--CCCCCCCC--CCCCcHHHHHHHHHhcCCCcEEEEecC
Q 037807 147 IID--AFDPIRPG--HDLFEGPFFELVAKALRPGGAMCIQAE 184 (299)
Q Consensus 147 i~D--~~~~~~~~--~~l~t~ef~~~~~~~LkpgGvlv~~~~ 184 (299)
++. ........ ..-....+++.++++|+|||++++...
T Consensus 135 ~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 135 ICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp EECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 984 22211110 000026799999999999999998653
No 136
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.25 E-value=1.3e-11 Score=105.62 Aligned_cols=103 Identities=19% Similarity=0.210 Sum_probs=81.0
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
++..+|||||||+|..+..+++.. .+|+++|+++.+++.+++. ..++++++.+|+.++. +.++||+|
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~~D~s~~~~~~a~~~--------~~~~~~~~~~d~~~~~---~~~~~D~v 111 (218)
T 3ou2_A 45 NIRGDVLELASGTGYWTRHLSGLA--DRVTALDGSAEMIAEAGRH--------GLDNVEFRQQDLFDWT---PDRQWDAV 111 (218)
T ss_dssp TSCSEEEEESCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHGGG--------CCTTEEEEECCTTSCC---CSSCEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhcC--CeEEEEeCCHHHHHHHHhc--------CCCCeEEEecccccCC---CCCceeEE
Confidence 455799999999999999999883 5899999999999999981 2368999999998762 36899999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecC
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAE 184 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~ 184 (299)
++...-...+.. ....+++.+++.|+|||.+++...
T Consensus 112 ~~~~~l~~~~~~--~~~~~l~~~~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 112 FFAHWLAHVPDD--RFEAFWESVRSAVAPGGVVEFVDV 147 (218)
T ss_dssp EEESCGGGSCHH--HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEechhhcCCHH--HHHHHHHHHHHHcCCCeEEEEEeC
Confidence 986432211110 016789999999999999998653
No 137
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.25 E-value=1.1e-11 Score=111.26 Aligned_cols=103 Identities=16% Similarity=0.075 Sum_probs=81.8
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAII 147 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi 147 (299)
++.+|||||||+|..+..+++.. .+|++||+++.+++.+++.+... ..+++++.+|+.+... .++||+|+
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g--~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~~~---~~~fD~i~ 189 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLG--YDVTSWDHNENSIAFLNETKEKE-----NLNISTALYDINAANI---QENYDFIV 189 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCGGGCCC---CSCEEEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHCC--CeEEEEECCHHHHHHHHHHHHHc-----CCceEEEEeccccccc---cCCccEEE
Confidence 57899999999999999999873 48999999999999999988754 2389999999876532 57899999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 148 IDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 148 ~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
+...-...+.. ....+++.+.+.|+|||.+++.
T Consensus 190 ~~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~i~ 222 (286)
T 3m70_A 190 STVVFMFLNRE--RVPSIIKNMKEHTNVGGYNLIV 222 (286)
T ss_dssp ECSSGGGSCGG--GHHHHHHHHHHTEEEEEEEEEE
T ss_pred EccchhhCCHH--HHHHHHHHHHHhcCCCcEEEEE
Confidence 86533211111 1257999999999999997664
No 138
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.25 E-value=3.4e-11 Score=102.99 Aligned_cols=100 Identities=17% Similarity=0.152 Sum_probs=77.6
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
++..+|||||||+|..+..+++.. .+|++||+++.+++.+++.+ +++++.+|+.+.. ..++||+|
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~----------~~~~~~~d~~~~~---~~~~fD~v 106 (211)
T 3e23_A 42 PAGAKILELGCGAGYQAEAMLAAG--FDVDATDGSPELAAEASRRL----------GRPVRTMLFHQLD---AIDAYDAV 106 (211)
T ss_dssp CTTCEEEESSCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHH----------TSCCEECCGGGCC---CCSCEEEE
T ss_pred CCCCcEEEECCCCCHHHHHHHHcC--CeEEEECCCHHHHHHHHHhc----------CCceEEeeeccCC---CCCcEEEE
Confidence 456899999999999999999873 58999999999999999875 3566778876643 26899999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++...-...+.. -...+++.+++.|+|||.+++..
T Consensus 107 ~~~~~l~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~ 141 (211)
T 3e23_A 107 WAHACLLHVPRD--ELADVLKLIWRALKPGGLFYASY 141 (211)
T ss_dssp EECSCGGGSCHH--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EecCchhhcCHH--HHHHHHHHHHHhcCCCcEEEEEE
Confidence 986432211100 01578999999999999999864
No 139
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.25 E-value=7.6e-12 Score=109.91 Aligned_cols=107 Identities=19% Similarity=0.189 Sum_probs=81.9
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
+++.+|||||||+|..+..+++.. .+|+++|+|+.+++.|++.+... ..+++++.+|+.+.. . .++||+|
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~-----~~~v~~~~~d~~~~~--~-~~~fD~v 109 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAERG--YEVVGLDLHEEMLRVARRKAKER-----NLKIEFLQGDVLEIA--F-KNEFDAV 109 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHT-----TCCCEEEESCGGGCC--C-CSCEEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHHCC--CeEEEEECCHHHHHHHHHHHHhc-----CCceEEEECChhhcc--c-CCCccEE
Confidence 356899999999999999999873 48999999999999999987653 347999999987742 2 4689999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecC
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAE 184 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~ 184 (299)
++.......... --...+++.+++.|+|||++++...
T Consensus 110 ~~~~~~~~~~~~-~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 110 TMFFSTIMYFDE-EDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp EECSSGGGGSCH-HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEcCCchhcCCH-HHHHHHHHHHHHHcCCCeEEEEecc
Confidence 975321110000 0125789999999999999998653
No 140
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.25 E-value=1.3e-11 Score=114.67 Aligned_cols=109 Identities=16% Similarity=0.085 Sum_probs=83.4
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAII 147 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi 147 (299)
+.++|||||||+|.++..+++. +..+|++||+++ +++.|++.....+ + ..+++++.+|+.+.. .+.++||+|+
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~-~l~~a~~~~~~~~--~-~~~v~~~~~d~~~~~--~~~~~fD~Ii 138 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKA-GARKVIGIECSS-ISDYAVKIVKANK--L-DHVVTIIKGKVEEVE--LPVEKVDIII 138 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTT--C-TTTEEEEESCTTTCC--CSSSCEEEEE
T ss_pred CCCEEEEEeccchHHHHHHHHC-CCCEEEEECcHH-HHHHHHHHHHHcC--C-CCcEEEEECcHHHcc--CCCCceEEEE
Confidence 5689999999999999999988 457999999995 9999999876542 1 357999999987762 2357999999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecC
Q 037807 148 IDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAE 184 (299)
Q Consensus 148 ~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~ 184 (299)
++......... -....+++.+.+.|+|||+++....
T Consensus 139 s~~~~~~l~~~-~~~~~~l~~~~r~LkpgG~li~~~~ 174 (349)
T 3q7e_A 139 SEWMGYCLFYE-SMLNTVLHARDKWLAPDGLIFPDRA 174 (349)
T ss_dssp ECCCBBTBTBT-CCHHHHHHHHHHHEEEEEEEESCEE
T ss_pred EccccccccCc-hhHHHHHHHHHHhCCCCCEEccccc
Confidence 97532211111 1136788999999999999985443
No 141
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.25 E-value=1.7e-11 Score=107.26 Aligned_cols=105 Identities=10% Similarity=0.030 Sum_probs=80.8
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhc---CCCCc
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTV---QSGTF 143 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~---~~~~f 143 (299)
.+..+|||||||+|..+..+++... +|++||+|+.+++.+++.++ ..+++++.+|+.+..... ....|
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~-------~~~~~~~~~d~~~~~~~~~~~~~~~~ 125 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENT-------AANISYRLLDGLVPEQAAQIHSEIGD 125 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSC-------CTTEEEEECCTTCHHHHHHHHHHHCS
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCc-------ccCceEEECcccccccccccccccCc
Confidence 3567899999999999999998753 79999999999999999873 358999999997643321 01359
Q ss_pred cEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 144 DAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 144 DvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
|+|++...-...+... ...+++.+++.|+|||.+++.
T Consensus 126 d~v~~~~~~~~~~~~~--~~~~l~~~~~~LkpgG~l~i~ 162 (245)
T 3ggd_A 126 ANIYMRTGFHHIPVEK--RELLGQSLRILLGKQGAMYLI 162 (245)
T ss_dssp CEEEEESSSTTSCGGG--HHHHHHHHHHHHTTTCEEEEE
T ss_pred cEEEEcchhhcCCHHH--HHHHHHHHHHHcCCCCEEEEE
Confidence 9999876543322111 268999999999999987664
No 142
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.25 E-value=1.7e-11 Score=106.88 Aligned_cols=104 Identities=17% Similarity=0.147 Sum_probs=80.4
Q ss_pred CCCCeEEEEeccccHHHHHHHhcC-CccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHH--HhcCCCCc
Q 037807 67 PNPKKVLLIGGGDGGILREISRHA-SVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYL--KTVQSGTF 143 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l--~~~~~~~f 143 (299)
....+|||||||+|.++..++++. +..+|++||+++.+++.+.+.... .++++++.+|+.+.. ... .++|
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~------~~~v~~~~~d~~~~~~~~~~-~~~~ 148 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKK------RTNIIPVIEDARHPHKYRML-IAMV 148 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHH------CTTEEEECSCTTCGGGGGGG-CCCE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhc------cCCeEEEEcccCChhhhccc-CCcE
Confidence 456799999999999999999862 346899999999988777766543 268999999997642 222 5789
Q ss_pred cEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 144 DAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 144 DvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
|+|++|.+.+. ....+++.+.+.|+|||++++..
T Consensus 149 D~V~~~~~~~~------~~~~~~~~~~~~LkpgG~l~i~~ 182 (233)
T 2ipx_A 149 DVIFADVAQPD------QTRIVALNAHTFLRNGGHFVISI 182 (233)
T ss_dssp EEEEECCCCTT------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEEcCCCcc------HHHHHHHHHHHHcCCCeEEEEEE
Confidence 99999876321 11456888999999999999843
No 143
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.24 E-value=2e-11 Score=112.90 Aligned_cols=101 Identities=14% Similarity=0.136 Sum_probs=83.6
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.+..+|||+|||+|.++.. ++ +..+|++||+|+.+++.+++++..++. .++++++.+|+.+++ ++||+|
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n~l---~~~v~~~~~D~~~~~-----~~fD~V 262 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLNKL---EHKIIPILSDVREVD-----VKGNRV 262 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHTTC---TTTEEEEESCGGGCC-----CCEEEE
T ss_pred CCCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHcCC---CCcEEEEECChHHhc-----CCCcEE
Confidence 3568999999999999999 87 357899999999999999999876521 258999999998875 679999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCCc
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAESL 186 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s~ 186 (299)
++|++.. ..++++.+.+.|+|||++++.+.+.
T Consensus 263 i~dpP~~--------~~~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 263 IMNLPKF--------AHKFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp EECCTTT--------GGGGHHHHHHHEEEEEEEEEEEEES
T ss_pred EECCcHh--------HHHHHHHHHHHcCCCCEEEEEEeec
Confidence 9986432 2578999999999999988865333
No 144
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.24 E-value=7.6e-12 Score=108.87 Aligned_cols=108 Identities=15% Similarity=0.149 Sum_probs=82.7
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
+++.+|||||||+|..+..+++.. .+++++|+++.+++.+++.+... ..+++++.+|+.++. . .++||+|
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l~~~~--~~~~~~D~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~~--~-~~~fD~v 105 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENLCPKF--KNTWAVDLSQEMLSEAENKFRSQ-----GLKPRLACQDISNLN--I-NRKFDLI 105 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGGS--SEEEEECSCHHHHHHHHHHHHHT-----TCCCEEECCCGGGCC--C-SCCEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHCC--CcEEEEECCHHHHHHHHHHHhhc-----CCCeEEEecccccCC--c-cCCceEE
Confidence 367899999999999999999873 57999999999999999987653 237999999987643 2 3789999
Q ss_pred EEcC-CCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCC
Q 037807 147 IIDA-FDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAES 185 (299)
Q Consensus 147 i~D~-~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s 185 (299)
++.. .-...+.. --...+++.+++.|+|||.+++...+
T Consensus 106 ~~~~~~l~~~~~~-~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (246)
T 1y8c_A 106 TCCLDSTNYIIDS-DDLKKYFKAVSNHLKEGGVFIFDINS 144 (246)
T ss_dssp EECTTGGGGCCSH-HHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred EEcCccccccCCH-HHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 9854 22111100 01267899999999999999986533
No 145
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.24 E-value=4.2e-11 Score=104.99 Aligned_cols=106 Identities=16% Similarity=0.155 Sum_probs=82.1
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.++.+|||||||+|..+..+++.. ..+|++||+++.+++.+++.+.. .++++++.+|+.+.. .++++||+|
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~------~~~~~~~~~d~~~~~--~~~~~fD~v 162 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAG------MPVGKFILASMETAT--LPPNTYDLI 162 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTT------SSEEEEEESCGGGCC--CCSSCEEEE
T ss_pred cCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhcc------CCceEEEEccHHHCC--CCCCCeEEE
Confidence 357899999999999999988764 46799999999999999998753 268999999987642 235789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++...-...+.. -...+++.+++.|+|||.+++..
T Consensus 163 ~~~~~l~~~~~~--~~~~~l~~~~~~LkpgG~l~i~~ 197 (254)
T 1xtp_A 163 VIQWTAIYLTDA--DFVKFFKHCQQALTPNGYIFFKE 197 (254)
T ss_dssp EEESCGGGSCHH--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcchhhhCCHH--HHHHHHHHHHHhcCCCeEEEEEe
Confidence 985432111100 02678999999999999998854
No 146
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.24 E-value=3.5e-11 Score=109.66 Aligned_cols=106 Identities=13% Similarity=0.094 Sum_probs=81.7
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
++..+|||||||+|..+..+++..+ .+|++||+++.+++.|++.+...+ -.++++++.+|+.++ +++||+|
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~-----~~~fD~v 159 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERFD-VNVIGLTLSKNQHARCEQVLASID---TNRSRQVLLQGWEDF-----AEPVDRI 159 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHTSC---CSSCEEEEESCGGGC-----CCCCSEE
T ss_pred CCcCEEEEEcccchHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcC---CCCceEEEECChHHC-----CCCcCEE
Confidence 4567999999999999999997633 489999999999999999876431 135799999997553 3789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++...-...+.. ....+++.+.+.|+|||.+++..
T Consensus 160 ~~~~~l~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~ 194 (318)
T 2fk8_A 160 VSIEAFEHFGHE--NYDDFFKRCFNIMPADGRMTVQS 194 (318)
T ss_dssp EEESCGGGTCGG--GHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEeChHHhcCHH--HHHHHHHHHHHhcCCCcEEEEEE
Confidence 985322111100 12789999999999999999865
No 147
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.24 E-value=2.7e-11 Score=104.62 Aligned_cols=112 Identities=18% Similarity=0.264 Sum_probs=83.1
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhc-CCCCCCEEEEEccHHHHHHhcCCCCccE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAI-GYEDSRVILHVCDGSEYLKTVQSGTFDA 145 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~-~~~~~rv~v~~~D~~~~l~~~~~~~fDv 145 (299)
++..+|||||||+|..+..+++.. .+|+++|+++.+++.+++.+..... .....+++++.+|+.+.. .++++||+
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~D~ 104 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASKG--YSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLS--FHDSSFDF 104 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCC--SCTTCEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccC--CCCCceeE
Confidence 467899999999999999999873 5899999999999999998765421 111347899999987642 12578999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 146 IIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 146 Ii~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
|++...-...+.. .....+++.+++.|+|||.+++..
T Consensus 105 v~~~~~l~~~~~~-~~~~~~l~~~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 105 AVMQAFLTSVPDP-KERSRIIKEVFRVLKPGAYLYLVE 141 (235)
T ss_dssp EEEESCGGGCCCH-HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEcchhhcCCCH-HHHHHHHHHHHHHcCCCeEEEEEE
Confidence 9986432211110 001279999999999999998864
No 148
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.23 E-value=2.8e-11 Score=110.87 Aligned_cols=103 Identities=20% Similarity=0.192 Sum_probs=81.7
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCC-ccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHAS-VEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDA 145 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDv 145 (299)
.+..+|||||||+|.++..+++..+ ..+|+++|+++++++.|++++... .-++++++.+|+.+.+.. .++||+
T Consensus 74 ~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~----g~~~v~~~~~d~~~~~~~--~~~fD~ 147 (317)
T 1dl5_A 74 DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERL----GIENVIFVCGDGYYGVPE--FSPYDV 147 (317)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHT----TCCSEEEEESCGGGCCGG--GCCEEE
T ss_pred CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHc----CCCCeEEEECChhhcccc--CCCeEE
Confidence 4568999999999999999988643 357999999999999999987654 224699999999875542 468999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCC
Q 037807 146 IIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAES 185 (299)
Q Consensus 146 Ii~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s 185 (299)
|+++..-+.. .+.+.+.|+|||+++++.+.
T Consensus 148 Iv~~~~~~~~----------~~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 148 IFVTVGVDEV----------PETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp EEECSBBSCC----------CHHHHHHEEEEEEEEEEBCB
T ss_pred EEEcCCHHHH----------HHHHHHhcCCCcEEEEEECC
Confidence 9998654321 15788899999999997643
No 149
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.23 E-value=1.6e-11 Score=101.42 Aligned_cols=97 Identities=15% Similarity=0.136 Sum_probs=77.9
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.+..+|||||||+|..+..+++.. .+|+++|+++.+++.+++. .++++++.+| +. .++++||+|
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~---------~~~v~~~~~d----~~-~~~~~~D~v 79 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFA--TKLYCIDINVIALKEVKEK---------FDSVITLSDP----KE-IPDNSVDFI 79 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTE--EEEEEECSCHHHHHHHHHH---------CTTSEEESSG----GG-SCTTCEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhhc--CeEEEEeCCHHHHHHHHHh---------CCCcEEEeCC----CC-CCCCceEEE
Confidence 356799999999999999999875 4899999999999999987 2478999999 22 236789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++...-...+. ...+++.+++.|+|||.+++..
T Consensus 80 ~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~~~~ 112 (170)
T 3i9f_A 80 LFANSFHDMDD----KQHVISEVKRILKDDGRVIIID 112 (170)
T ss_dssp EEESCSTTCSC----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEccchhcccC----HHHHHHHHHHhcCCCCEEEEEE
Confidence 98644322211 2789999999999999998853
No 150
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.23 E-value=1.5e-11 Score=110.80 Aligned_cols=107 Identities=21% Similarity=0.244 Sum_probs=83.4
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
++..+|||||||+|..+..+++..+ .+|+++|+++.+++.|++.+...+ -.++++++.+|+.+.. .++++||+|
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~~--~~~~~fD~v 154 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFG-VSIDCLNIAPVQNKRNEEYNNQAG---LADNITVKYGSFLEIP--CEDNSYDFI 154 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHHHT---CTTTEEEEECCTTSCS--SCTTCEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHhcC---CCcceEEEEcCcccCC--CCCCCEeEE
Confidence 4568999999999999999998633 489999999999999999876542 1368999999987632 125789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++...-...+. ...+++.++++|+|||.+++..
T Consensus 155 ~~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 155 WSQDAFLHSPD----KLKVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp EEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EecchhhhcCC----HHHHHHHHHHHcCCCeEEEEEE
Confidence 98533211111 2789999999999999998864
No 151
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.23 E-value=6.5e-11 Score=108.56 Aligned_cols=114 Identities=18% Similarity=0.159 Sum_probs=87.1
Q ss_pred CCCCeEEEEeccccHHHHHHHhc-CCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccE
Q 037807 67 PNPKKVLLIGGGDGGILREISRH-ASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDA 145 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDv 145 (299)
.+..+|||+|||+|+.+..+++. ++..+|+++|+++.+++.+++++...+ -++++++.+|+.++.. . .++||+
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g----~~~v~~~~~D~~~~~~-~-~~~fD~ 190 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLG----VLNVILFHSSSLHIGE-L-NVEFDK 190 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHT----CCSEEEESSCGGGGGG-G-CCCEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhC----CCeEEEEECChhhccc-c-cccCCE
Confidence 45679999999999999999875 334689999999999999999987652 3479999999987654 2 568999
Q ss_pred EEEcCCCCC-CC----CCCC--C-----------cHHHHHHHHHhcCCCcEEEEecCCc
Q 037807 146 IIIDAFDPI-RP----GHDL--F-----------EGPFFELVAKALRPGGAMCIQAESL 186 (299)
Q Consensus 146 Ii~D~~~~~-~~----~~~l--~-----------t~ef~~~~~~~LkpgGvlv~~~~s~ 186 (299)
|++|++... +. +... + ..++++.+.+.|||||.++..+.+.
T Consensus 191 Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 191 ILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSL 249 (315)
T ss_dssp EEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred EEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 999976321 10 1000 1 1478999999999999999866443
No 152
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.23 E-value=3e-11 Score=112.32 Aligned_cols=112 Identities=18% Similarity=0.177 Sum_probs=86.3
Q ss_pred CCCCeEEEEeccccHHHHHHHhcC-CccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHA-SVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDA 145 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDv 145 (299)
.+..+|||+|||+|.++.+++... +..+|+++|+|+.+++.|++++...+ . ++++++.+|+.++... .+.||+
T Consensus 202 ~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g--~--~~i~~~~~D~~~~~~~--~~~~D~ 275 (354)
T 3tma_A 202 RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASG--L--SWIRFLRADARHLPRF--FPEVDR 275 (354)
T ss_dssp CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTT--C--TTCEEEECCGGGGGGT--CCCCSE
T ss_pred CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcC--C--CceEEEeCChhhCccc--cCCCCE
Confidence 356789999999999999999853 45689999999999999999987652 1 2899999999887542 456999
Q ss_pred EEEcCCCCCCCCCC--C--CcHHHHHHHHHhcCCCcEEEEecC
Q 037807 146 IIIDAFDPIRPGHD--L--FEGPFFELVAKALRPGGAMCIQAE 184 (299)
Q Consensus 146 Ii~D~~~~~~~~~~--l--~t~ef~~~~~~~LkpgGvlv~~~~ 184 (299)
|++|++........ + ....+++.+++.|+|||.+++.+.
T Consensus 276 Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 276 ILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp EEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred EEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 99998754322110 0 015688899999999999998553
No 153
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.23 E-value=2.5e-11 Score=106.15 Aligned_cols=107 Identities=9% Similarity=0.105 Sum_probs=84.8
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
++..+|||||||+|.++..+++..+..+|+++|+|+..++.|++++..++. ..+++++.+|+.+.+.. .++||+|
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl---~~~i~~~~~d~l~~l~~--~~~~D~I 88 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGL---KEKIQVRLANGLAAFEE--TDQVSVI 88 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTC---TTTEEEEECSGGGGCCG--GGCCCEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC---CceEEEEECchhhhccc--CcCCCEE
Confidence 456799999999999999999876678999999999999999999876532 34899999999776542 2369998
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecC
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAE 184 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~ 184 (299)
++.... .. .-.+++..+.+.|+++|.|++|..
T Consensus 89 viaG~G-----g~-~i~~Il~~~~~~L~~~~~lVlq~~ 120 (225)
T 3kr9_A 89 TIAGMG-----GR-LIARILEEGLGKLANVERLILQPN 120 (225)
T ss_dssp EEEEEC-----HH-HHHHHHHHTGGGCTTCCEEEEEES
T ss_pred EEcCCC-----hH-HHHHHHHHHHHHhCCCCEEEEECC
Confidence 863211 00 126788899999999999999753
No 154
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.22 E-value=1e-11 Score=109.97 Aligned_cols=101 Identities=18% Similarity=0.240 Sum_probs=79.0
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
+++.+|||||||+|..+..+++.. .+|++||+++.+++.|++.++ +++++.+|+.++.. +++||+|
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~---------~~~~~~~d~~~~~~---~~~fD~v 114 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADSF--GTVEGLELSADMLAIARRRNP---------DAVLHHGDMRDFSL---GRRFSAV 114 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTTS--SEEEEEESCHHHHHHHHHHCT---------TSEEEECCTTTCCC---SCCEEEE
T ss_pred CCCCcEEEeCCcCCHHHHHHHHcC--CeEEEEECCHHHHHHHHhhCC---------CCEEEECChHHCCc---cCCcCEE
Confidence 456899999999999999998874 479999999999999998753 78999999877432 5789999
Q ss_pred EEcC-CCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 147 IIDA-FDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 147 i~D~-~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
++.. .-...+.. --...+++.+++.|+|||.+++.
T Consensus 115 ~~~~~~l~~~~~~-~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 115 TCMFSSIGHLAGQ-AELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp EECTTGGGGSCHH-HHHHHHHHHHHHTEEEEEEEEEC
T ss_pred EEcCchhhhcCCH-HHHHHHHHHHHHhcCCCcEEEEE
Confidence 9864 21111000 01156899999999999999985
No 155
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.22 E-value=2.1e-11 Score=105.61 Aligned_cols=105 Identities=17% Similarity=0.095 Sum_probs=81.6
Q ss_pred CCCCeEEEEeccccHHHHHHHhcC-----CccEEEEEECCHHHHHHHHhhchhhhc-CCCCCCEEEEEccHHHHH----H
Q 037807 67 PNPKKVLLIGGGDGGILREISRHA-----SVEQIHICEIDTMLINVYKEYFPEIAI-GYEDSRVILHVCDGSEYL----K 136 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~-----~~~~v~~VEid~~vi~~a~~~~~~~~~-~~~~~rv~v~~~D~~~~l----~ 136 (299)
.+..+|||||||+|..+..+++.. +..+|+++|+++.+++.|++++...+. ....++++++.+|+.+.. .
T Consensus 79 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 158 (227)
T 2pbf_A 79 KPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKK 158 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCc
Confidence 356899999999999999998864 235899999999999999998775410 001358999999998743 2
Q ss_pred hcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 137 TVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 137 ~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
. .++||+|+++...+. +++.+.+.|+|||++++..
T Consensus 159 ~--~~~fD~I~~~~~~~~----------~~~~~~~~LkpgG~lv~~~ 193 (227)
T 2pbf_A 159 E--LGLFDAIHVGASASE----------LPEILVDLLAENGKLIIPI 193 (227)
T ss_dssp H--HCCEEEEEECSBBSS----------CCHHHHHHEEEEEEEEEEE
T ss_pred c--CCCcCEEEECCchHH----------HHHHHHHhcCCCcEEEEEE
Confidence 2 468999998865431 3478899999999999854
No 156
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.22 E-value=7.6e-12 Score=106.60 Aligned_cols=120 Identities=13% Similarity=0.054 Sum_probs=84.9
Q ss_pred hhHHHHHHhhcccCCCCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccH
Q 037807 52 CAYQEMITHLPLCSIPNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDG 131 (299)
Q Consensus 52 ~~Y~e~l~~~~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~ 131 (299)
..|.+++..+.. .+++.+|||+|||+|..+..++...+ .+|++||+++.+++.+++.+... .++++++.+|+
T Consensus 9 ~~~~~~~~~~~~--~~~~~~vLDiGcG~G~~~~~~~~~~~-~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~d~ 80 (209)
T 2p8j_A 9 PQLYRFLKYCNE--SNLDKTVLDCGAGGDLPPLSIFVEDG-YKTYGIEISDLQLKKAENFSREN-----NFKLNISKGDI 80 (209)
T ss_dssp THHHHHHHHHHH--SSSCSEEEEESCCSSSCTHHHHHHTT-CEEEEEECCHHHHHHHHHHHHHH-----TCCCCEEECCT
T ss_pred hhHHHHHHHHhc--cCCCCEEEEECCCCCHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhc-----CCceEEEECch
Confidence 345665554332 24568999999999997554444433 58999999999999999987654 35789999998
Q ss_pred HHHHHhcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 132 SEYLKTVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 132 ~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
.+.. .++++||+|++...-...+.. -...+++.+++.|+|||++++..
T Consensus 81 ~~~~--~~~~~fD~v~~~~~l~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 81 RKLP--FKDESMSFVYSYGTIFHMRKN--DVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp TSCC--SCTTCEEEEEECSCGGGSCHH--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhCC--CCCCceeEEEEcChHHhCCHH--HHHHHHHHHHHHcCCCcEEEEEE
Confidence 7632 225789999985321111000 12678999999999999999854
No 157
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.22 E-value=2e-11 Score=103.59 Aligned_cols=100 Identities=12% Similarity=0.256 Sum_probs=79.1
Q ss_pred eEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEEEcC
Q 037807 71 KVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAIIIDA 150 (299)
Q Consensus 71 ~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi~D~ 150 (299)
+|||||||+|..+..+++.. .+|+++|+++.+++.+++.+... ..+++++.+|+.+.. .++++||+|++..
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~~--~~~~~fD~v~~~~ 102 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLG--YEVTAVDQSSVGLAKAKQLAQEK-----GVKITTVQSNLADFD--IVADAWEGIVSIF 102 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTT--CEEEEECSSHHHHHHHHHHHHHH-----TCCEEEECCBTTTBS--CCTTTCSEEEEEC
T ss_pred CEEEECCCCCHhHHHHHhCC--CeEEEEECCHHHHHHHHHHHHhc-----CCceEEEEcChhhcC--CCcCCccEEEEEh
Confidence 99999999999999998873 48999999999999999987654 248999999987642 2257899999853
Q ss_pred CCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 151 FDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 151 ~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
. ..... -...+++.+.+.|+|||.+++..
T Consensus 103 ~-~~~~~---~~~~~l~~~~~~L~pgG~l~~~~ 131 (202)
T 2kw5_A 103 C-HLPSS---LRQQLYPKVYQGLKPGGVFILEG 131 (202)
T ss_dssp C-CCCHH---HHHHHHHHHHTTCCSSEEEEEEE
T ss_pred h-cCCHH---HHHHHHHHHHHhcCCCcEEEEEE
Confidence 2 11000 12678999999999999998864
No 158
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.22 E-value=4e-11 Score=102.84 Aligned_cols=103 Identities=21% Similarity=0.178 Sum_probs=80.5
Q ss_pred CCCCeEEEEeccccHHHHHHHhcC-CccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHA-SVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDA 145 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDv 145 (299)
.+..+|||||||+|..+..+++.. +..+|+++|+++.+++.+++++... ..++++++.+|+...+.. .++||+
T Consensus 76 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~----~~~~v~~~~~d~~~~~~~--~~~fD~ 149 (215)
T 2yxe_A 76 KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKL----GYDNVIVIVGDGTLGYEP--LAPYDR 149 (215)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH----TCTTEEEEESCGGGCCGG--GCCEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc----CCCCeEEEECCcccCCCC--CCCeeE
Confidence 456799999999999999998864 2368999999999999999987654 224699999998654332 468999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCC
Q 037807 146 IIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAES 185 (299)
Q Consensus 146 Ii~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s 185 (299)
|+++...+.. .+.+.+.|+|||.+++...+
T Consensus 150 v~~~~~~~~~----------~~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 150 IYTTAAGPKI----------PEPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp EEESSBBSSC----------CHHHHHTEEEEEEEEEEESS
T ss_pred EEECCchHHH----------HHHHHHHcCCCcEEEEEECC
Confidence 9987654321 14789999999999986543
No 159
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.22 E-value=9.5e-12 Score=108.11 Aligned_cols=93 Identities=14% Similarity=0.174 Sum_probs=76.6
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcC-CCCccE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQ-SGTFDA 145 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~-~~~fDv 145 (299)
++..+|||||||+|..+..+++.. .+|+++|+++.+++.++++. ++++++.+|+.+.+. .+ +++||+
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~---------~~~~~~~~d~~~~~~-~~~~~~fD~ 114 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQA--ARWAAYDFSPELLKLARANA---------PHADVYEWNGKGELP-AGLGAPFGL 114 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHC---------TTSEEEECCSCSSCC-TTCCCCEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhC---------CCceEEEcchhhccC-CcCCCCEEE
Confidence 457899999999999999999883 58999999999999999872 478999999854332 12 578999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEE
Q 037807 146 IIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCI 181 (299)
Q Consensus 146 Ii~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~ 181 (299)
|++. .++ ..+++.+.+.|+|||.++.
T Consensus 115 v~~~-~~~---------~~~l~~~~~~LkpgG~l~~ 140 (226)
T 3m33_A 115 IVSR-RGP---------TSVILRLPELAAPDAHFLY 140 (226)
T ss_dssp EEEE-SCC---------SGGGGGHHHHEEEEEEEEE
T ss_pred EEeC-CCH---------HHHHHHHHHHcCCCcEEEE
Confidence 9987 222 5678899999999999993
No 160
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.22 E-value=3.2e-11 Score=104.78 Aligned_cols=106 Identities=17% Similarity=0.201 Sum_probs=80.7
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCc------cEEEEEECCHHHHHHHHhhchhhhc-CCCCCCEEEEEccHHHHHHhcC
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASV------EQIHICEIDTMLINVYKEYFPEIAI-GYEDSRVILHVCDGSEYLKTVQ 139 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~------~~v~~VEid~~vi~~a~~~~~~~~~-~~~~~rv~v~~~D~~~~l~~~~ 139 (299)
.+..+|||||||+|..+..+++..+. .+|+++|+++.+++.|++++...+. .+..++++++.+|+.+.+..
T Consensus 83 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-- 160 (227)
T 1r18_A 83 KPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPP-- 160 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGG--
T ss_pred CCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCc--
Confidence 34679999999999999999875332 4899999999999999998765310 00025899999999874332
Q ss_pred CCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecC
Q 037807 140 SGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAE 184 (299)
Q Consensus 140 ~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~ 184 (299)
.++||+|+++...+. +.+.+.+.|+|||++++..+
T Consensus 161 ~~~fD~I~~~~~~~~----------~~~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 161 NAPYNAIHVGAAAPD----------TPTELINQLASGGRLIVPVG 195 (227)
T ss_dssp GCSEEEEEECSCBSS----------CCHHHHHTEEEEEEEEEEES
T ss_pred CCCccEEEECCchHH----------HHHHHHHHhcCCCEEEEEEe
Confidence 368999998765432 23678999999999998654
No 161
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.21 E-value=8.3e-12 Score=113.44 Aligned_cols=110 Identities=15% Similarity=0.137 Sum_probs=82.5
Q ss_pred CCCCeEEEEeccccHHHHHHH-hcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccE
Q 037807 67 PNPKKVLLIGGGDGGILREIS-RHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDA 145 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~-~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDv 145 (299)
+++.+|||||||+|..+..++ +..+..+|+++|+++.+++.|++++...+. ..+++++.+|+.+.. . +++||+
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~--~-~~~fD~ 190 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHAL---AGQITLHRQDAWKLD--T-REGYDL 190 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTT---GGGEEEEECCGGGCC--C-CSCEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCC---CCceEEEECchhcCC--c-cCCeEE
Confidence 467899999999999999985 333457899999999999999998765321 347999999988743 2 378999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 146 IIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 146 Ii~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
|++...-...+.. -....+++.+++.|+|||++++..
T Consensus 191 v~~~~~~~~~~~~-~~~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 191 LTSNGLNIYEPDD-ARVTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp EECCSSGGGCCCH-HHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEECChhhhcCCH-HHHHHHHHHHHHhcCCCeEEEEEe
Confidence 9985432211110 001348999999999999999865
No 162
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.21 E-value=3.3e-12 Score=111.70 Aligned_cols=103 Identities=12% Similarity=-0.019 Sum_probs=80.6
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAII 147 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi 147 (299)
+..+|||+|||+|..+..+++.. .+|++||+|+.+++.|++++...+. .++++++.+|+.++.. .++||+|+
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~~~~---~~~~~~~~~d~~~~~~---~~~~D~v~ 149 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG--MRVIAIDIDPVKIALARNNAEVYGI---ADKIEFICGDFLLLAS---FLKADVVF 149 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTC---GGGEEEEESCHHHHGG---GCCCSEEE
T ss_pred CCCEEEECccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcCC---CcCeEEEECChHHhcc---cCCCCEEE
Confidence 56899999999999999999874 7899999999999999998875411 2589999999998863 57899999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 148 IDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 148 ~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
++.+....... ...+..+++.|+|||++++.
T Consensus 150 ~~~~~~~~~~~----~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 150 LSPPWGGPDYA----TAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp ECCCCSSGGGG----GSSSBCTTTSCSSCHHHHHH
T ss_pred ECCCcCCcchh----hhHHHHHHhhcCCcceeHHH
Confidence 98654321111 11344678899999987753
No 163
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.21 E-value=7.1e-12 Score=110.58 Aligned_cols=111 Identities=14% Similarity=0.153 Sum_probs=80.0
Q ss_pred CCCeEEEEeccccHHHHHHHhc--CCccEEEEEECCHHHHHHHHhhchhh---hcCCCCCC-------------------
Q 037807 68 NPKKVLLIGGGDGGILREISRH--ASVEQIHICEIDTMLINVYKEYFPEI---AIGYEDSR------------------- 123 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~--~~~~~v~~VEid~~vi~~a~~~~~~~---~~~~~~~r------------------- 123 (299)
.+.+|||+|||+|.++..+++. .+..+|+++|+|+.+++.|++++... +. ..+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 127 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGL---TARELERREQSERFGKPSYLEA 127 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHH---HHHHHHHHHHHHHHCCHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccc---cccchhhhhhhhhcccccchhh
Confidence 4679999999999999999876 34578999999999999999876432 10 001
Q ss_pred ------EE-------------EEEccHHHHHHh---cCCCCccEEEEcCCCCCCCCC-----CCCcHHHHHHHHHhcCCC
Q 037807 124 ------VI-------------LHVCDGSEYLKT---VQSGTFDAIIIDAFDPIRPGH-----DLFEGPFFELVAKALRPG 176 (299)
Q Consensus 124 ------v~-------------v~~~D~~~~l~~---~~~~~fDvIi~D~~~~~~~~~-----~l~t~ef~~~~~~~Lkpg 176 (299)
++ ++.+|+.+.... ...++||+|+++.+....... .-....+++.+.+.|+||
T Consensus 128 ~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 207 (250)
T 1o9g_A 128 AQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAH 207 (250)
T ss_dssp HHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTT
T ss_pred hhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCC
Confidence 55 999998775421 014589999998643211110 011247899999999999
Q ss_pred cEEEE
Q 037807 177 GAMCI 181 (299)
Q Consensus 177 Gvlv~ 181 (299)
|++++
T Consensus 208 G~l~~ 212 (250)
T 1o9g_A 208 AVIAV 212 (250)
T ss_dssp CEEEE
T ss_pred cEEEE
Confidence 99998
No 164
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.21 E-value=4.5e-11 Score=112.82 Aligned_cols=111 Identities=12% Similarity=0.099 Sum_probs=81.3
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhh-----hcCCCCCCEEEEEccHHHHHHhcCCC
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEI-----AIGYEDSRVILHVCDGSEYLKTVQSG 141 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~-----~~~~~~~rv~v~~~D~~~~l~~~~~~ 141 (299)
.+..+|||||||+|.++..+++..+..+|++||+++.++++|++..... ..+....+++++.+|+.+......-.
T Consensus 172 ~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~~~ 251 (438)
T 3uwp_A 172 TDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRERIA 251 (438)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCccccccC
Confidence 4668999999999999999987656667999999999999999754221 01222468999999997643211014
Q ss_pred CccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 142 TFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 142 ~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
.||+|+++.+-. .+. ....++.+.+.|||||.|++.
T Consensus 252 ~aDVVf~Nn~~F-~pd----l~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 252 NTSVIFVNNFAF-GPE----VDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp TCSEEEECCTTC-CHH----HHHHHHHHHTTSCTTCEEEES
T ss_pred CccEEEEccccc-Cch----HHHHHHHHHHcCCCCcEEEEe
Confidence 699999875421 111 155678889999999999974
No 165
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.21 E-value=9.9e-12 Score=112.43 Aligned_cols=110 Identities=16% Similarity=0.204 Sum_probs=81.7
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAII 147 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi 147 (299)
.+.+|||||||+|..+..+++.. .+|++||+++.+++.|++.+....... ..+++++.+|+.++.. +++||+|+
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~-~~~v~~~~~d~~~~~~---~~~fD~v~ 155 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDLG--WEVTALELSTSVLAAFRKRLAEAPADV-RDRCTLVQGDMSAFAL---DKRFGTVV 155 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTTT--CCEEEEESCHHHHHHHHHHHHTSCHHH-HTTEEEEECBTTBCCC---SCCEEEEE
T ss_pred CCCcEEEEeccCCHHHHHHHHcC--CeEEEEECCHHHHHHHHHHHhhccccc-ccceEEEeCchhcCCc---CCCcCEEE
Confidence 45599999999999999999873 579999999999999999876431000 1589999999887422 57899998
Q ss_pred EcCC-CCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCC
Q 037807 148 IDAF-DPIRPGHDLFEGPFFELVAKALRPGGAMCIQAES 185 (299)
Q Consensus 148 ~D~~-~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s 185 (299)
+... -...+.. -...+++.+++.|+|||.|++...+
T Consensus 156 ~~~~~~~~~~~~--~~~~~l~~~~~~L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 156 ISSGSINELDEA--DRRGLYASVREHLEPGGKFLLSLAM 192 (299)
T ss_dssp ECHHHHTTSCHH--HHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ECCcccccCCHH--HHHHHHHHHHHHcCCCcEEEEEeec
Confidence 6311 1111000 0167899999999999999996533
No 166
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.21 E-value=4.8e-10 Score=95.47 Aligned_cols=100 Identities=18% Similarity=0.216 Sum_probs=79.3
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAII 147 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi 147 (299)
+..+|||+|||+|.++..+++.. ..+|+++|+|+.+++.+++++... ..+++++.+|+.++ +++||+|+
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~-----~~~~D~v~ 117 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLG-AKEVICVEVDKEAVDVLIENLGEF-----KGKFKVFIGDVSEF-----NSRVDIVI 117 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHTGGG-----TTSEEEEESCGGGC-----CCCCSEEE
T ss_pred CcCEEEEeeCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHc-----CCCEEEEECchHHc-----CCCCCEEE
Confidence 56799999999999999998873 458999999999999999998754 12799999998773 35899999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 148 IDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 148 ~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
+|++...... -....+++.+.+.| ||++++.
T Consensus 118 ~~~p~~~~~~--~~~~~~l~~~~~~l--~~~~~~~ 148 (207)
T 1wy7_A 118 MNPPFGSQRK--HADRPFLLKAFEIS--DVVYSIH 148 (207)
T ss_dssp ECCCCSSSST--TTTHHHHHHHHHHC--SEEEEEE
T ss_pred EcCCCccccC--CchHHHHHHHHHhc--CcEEEEE
Confidence 9986543221 12367899999998 6766654
No 167
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.21 E-value=3.5e-11 Score=105.53 Aligned_cols=106 Identities=11% Similarity=0.125 Sum_probs=84.7
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
++..+|||||||+|.++..+++..+..+|+++|+|+.+++.|++++...+. ..+++++.+|+.+.+.. .++||+|
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl---~~~I~~~~gD~l~~~~~--~~~~D~I 94 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGL---TSKIDVRLANGLSAFEE--ADNIDTI 94 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTC---TTTEEEEECSGGGGCCG--GGCCCEE
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCcEEEEECchhhcccc--ccccCEE
Confidence 456799999999999999999876678999999999999999999876532 35899999999887642 2479998
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++..-.. . ...+++....+.|+++|.|++|.
T Consensus 95 viaGmGg-----~-lI~~IL~~~~~~l~~~~~lIlqp 125 (230)
T 3lec_A 95 TICGMGG-----R-LIADILNNDIDKLQHVKTLVLQP 125 (230)
T ss_dssp EEEEECH-----H-HHHHHHHHTGGGGTTCCEEEEEE
T ss_pred EEeCCch-----H-HHHHHHHHHHHHhCcCCEEEEEC
Confidence 8632110 0 12678888889999999999975
No 168
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.21 E-value=3.9e-11 Score=103.85 Aligned_cols=106 Identities=21% Similarity=0.246 Sum_probs=80.7
Q ss_pred CCCCeEEEEeccccHHHHHHHhc-CCccEEEEEECCHHHHHHHHhhchhhhcC-CCCCCEEEEEccHHHHHHhcCCCCcc
Q 037807 67 PNPKKVLLIGGGDGGILREISRH-ASVEQIHICEIDTMLINVYKEYFPEIAIG-YEDSRVILHVCDGSEYLKTVQSGTFD 144 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~-~~~~rv~v~~~D~~~~l~~~~~~~fD 144 (299)
.+..+|||||||+|..+..+++. .+..+|+++|+++.+++.+++++...+.. ...++++++.+|+...... .+.||
T Consensus 76 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~fD 153 (226)
T 1i1n_A 76 HEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAE--EAPYD 153 (226)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGG--GCCEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCccc--CCCcC
Confidence 45679999999999999999875 33358999999999999999987653100 0135799999998754322 46899
Q ss_pred EEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecC
Q 037807 145 AIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAE 184 (299)
Q Consensus 145 vIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~ 184 (299)
+|+++...+ .+++.+.+.|+|||++++...
T Consensus 154 ~i~~~~~~~----------~~~~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 154 AIHVGAAAP----------VVPQALIDQLKPGGRLILPVG 183 (226)
T ss_dssp EEEECSBBS----------SCCHHHHHTEEEEEEEEEEES
T ss_pred EEEECCchH----------HHHHHHHHhcCCCcEEEEEEe
Confidence 999886542 234678899999999998653
No 169
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.21 E-value=4.2e-11 Score=110.95 Aligned_cols=107 Identities=14% Similarity=0.078 Sum_probs=81.0
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.+..+|||||||+|.++..+++.+ ..+|++||+++ +++.|++++...+ + .++++++.+|+.++- .+.++||+|
T Consensus 63 ~~~~~VLDiGcGtG~ls~~la~~g-~~~v~gvD~s~-~~~~a~~~~~~~~--~-~~~i~~~~~d~~~~~--~~~~~~D~I 135 (340)
T 2fyt_A 63 FKDKVVLDVGCGTGILSMFAAKAG-AKKVLGVDQSE-ILYQAMDIIRLNK--L-EDTITLIKGKIEEVH--LPVEKVDVI 135 (340)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTT-CSEEEEEESST-HHHHHHHHHHHTT--C-TTTEEEEESCTTTSC--CSCSCEEEE
T ss_pred cCCCEEEEeeccCcHHHHHHHHcC-CCEEEEEChHH-HHHHHHHHHHHcC--C-CCcEEEEEeeHHHhc--CCCCcEEEE
Confidence 456899999999999999999874 56899999997 9999999876542 1 368999999987652 224789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEE
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCI 181 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~ 181 (299)
+++........ .-....+++.+.+.|+|||+++.
T Consensus 136 vs~~~~~~l~~-~~~~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 136 ISEWMGYFLLF-ESMLDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp EECCCBTTBTT-TCHHHHHHHHHHHHEEEEEEEES
T ss_pred EEcCchhhccC-HHHHHHHHHHHHhhcCCCcEEEc
Confidence 98752111111 11125688999999999999983
No 170
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=99.21 E-value=2.9e-11 Score=107.93 Aligned_cols=147 Identities=15% Similarity=0.160 Sum_probs=99.4
Q ss_pred CCCeEEEEeccccHHHHHHHh--------cCC----ccEEEEEECCH---HHHH-----------HHHhhchhhh-----
Q 037807 68 NPKKVLLIGGGDGGILREISR--------HAS----VEQIHICEIDT---MLIN-----------VYKEYFPEIA----- 116 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~--------~~~----~~~v~~VEid~---~vi~-----------~a~~~~~~~~----- 116 (299)
++.+||+||+|+|..+..+++ .+. ..+++++|.+| +.++ .+++.+..+.
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 457999999999999887654 232 25899999987 4444 4555433210
Q ss_pred ---cCCCC--CCEEEEEccHHHHHHhcCC---CCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCCccc
Q 037807 117 ---IGYED--SRVILHVCDGSEYLKTVQS---GTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAESLWF 188 (299)
Q Consensus 117 ---~~~~~--~rv~v~~~D~~~~l~~~~~---~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s~~~ 188 (299)
..+++ .+++++.+|+.+.+..... ..||+|++|.+.|... +.+++.++|+.+.+.|+|||+|++.+..
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~-p~lw~~~~l~~l~~~L~pGG~l~tysaa--- 215 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKN-PDMWTQNLFNAMARLARPGGTLATFTSA--- 215 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTC-GGGCCHHHHHHHHHHEEEEEEEEESCCB---
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccC-hhhcCHHHHHHHHHHcCCCcEEEEEeCC---
Confidence 01222 4678999999999886522 2799999998877543 3688999999999999999999974422
Q ss_pred chHHHHHHHHHHhhh-cCCceeeeEEeecccCCcceeEEeccc
Q 037807 189 QQFSVQHLIDDCHRI-FKGSASYAWTTVPTYPSGVIGFMLCST 230 (299)
Q Consensus 189 ~~~~~~~~~~~l~~~-F~~~v~~~~~~vP~~~~g~w~~~~ask 230 (299)
. .+.+.|.+. | . + ..+|.|+ +-...+.|.+
T Consensus 216 --~---~vrr~L~~aGF-~-v----~~~~g~~-~kr~m~~a~~ 246 (257)
T 2qy6_A 216 --G---FVRRGLQEAGF-T-M----QKRKGFG-RKREMLCGVM 246 (257)
T ss_dssp --H---HHHHHHHHHTE-E-E----EEECCST-TCCCEEEEEE
T ss_pred --H---HHHHHHHHCCC-E-E----EeCCCCC-CCCceEEEEe
Confidence 2 233444443 5 2 2 3567664 4455677666
No 171
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.21 E-value=2.2e-11 Score=111.01 Aligned_cols=106 Identities=15% Similarity=0.160 Sum_probs=83.6
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
++..+|||||||+|..+..+++..+ .+|++||+++.+++.|++++...+ + .++++++.+|+.+.. .++++||+|
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~--~-~~~v~~~~~d~~~~~--~~~~~fD~V 189 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRFG-SRVEGVTLSAAQADFGNRRARELR--I-DDHVRSRVCNMLDTP--FDKGAVTAS 189 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHHTT--C-TTTEEEEECCTTSCC--CCTTCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHcC--C-CCceEEEECChhcCC--CCCCCEeEE
Confidence 4568999999999999999998632 589999999999999999876542 1 358999999987542 225789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++...-.... ...+++.+.+.|+|||.+++..
T Consensus 190 ~~~~~l~~~~-----~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 190 WNNESTMYVD-----LHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp EEESCGGGSC-----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCchhhCC-----HHHHHHHHHHHcCCCcEEEEEE
Confidence 9843221111 3889999999999999998754
No 172
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.20 E-value=1.1e-11 Score=111.12 Aligned_cols=112 Identities=20% Similarity=0.162 Sum_probs=83.7
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
+++.+|||||||+|..+..+++.+ ..+|+++|+++.+++.|++.+...+ ...+++++.+|+.+.... .+++||+|
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~-~~~~fD~v 137 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAG-IGEYYGVDIAEVSINDARVRARNMK---RRFKVFFRAQDSYGRHMD-LGKEFDVI 137 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHT-CSEEEEEESCHHHHHHHHHHHHTSC---CSSEEEEEESCTTTSCCC-CSSCEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcC---CCccEEEEECCccccccC-CCCCcCEE
Confidence 467899999999999999988874 4589999999999999999876431 125799999998764211 25789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++...-.......--...+++.+.+.|+|||.+++..
T Consensus 138 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 138 SSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTV 174 (298)
T ss_dssp EEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 9864321100000012678999999999999999865
No 173
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.20 E-value=3.9e-11 Score=98.47 Aligned_cols=119 Identities=14% Similarity=0.176 Sum_probs=82.7
Q ss_pred CCCCeEEEEeccccHHHHHHHhc-CCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHH-----Hh-cC
Q 037807 67 PNPKKVLLIGGGDGGILREISRH-ASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYL-----KT-VQ 139 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l-----~~-~~ 139 (299)
.+..+|||+|||+|..+..+++. .+..+++++|+++ +++ .++++++.+|+.+.- .. .+
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~--------------~~~~~~~~~d~~~~~~~~~~~~~~~ 85 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDP--------------IVGVDFLQGDFRDELVMKALLERVG 85 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCC--------------CTTEEEEESCTTSHHHHHHHHHHHT
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccc--------------cCcEEEEEcccccchhhhhhhccCC
Confidence 35679999999999999999886 3346899999999 642 157899999987652 11 23
Q ss_pred CCCccEEEEcCCCCCCCCCCCC-------cHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhhhc
Q 037807 140 SGTFDAIIIDAFDPIRPGHDLF-------EGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHRIF 204 (299)
Q Consensus 140 ~~~fDvIi~D~~~~~~~~~~l~-------t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~~F 204 (299)
+++||+|+++.+.........- ...+++.+.+.|+|||.+++..... .....+.+.+++.|
T Consensus 86 ~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~----~~~~~~~~~~~~~~ 153 (180)
T 1ej0_A 86 DSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG----EGFDEYLREIRSLF 153 (180)
T ss_dssp TCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS----TTHHHHHHHHHHHE
T ss_pred CCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC----CcHHHHHHHHHHhh
Confidence 5789999997654322110000 0578999999999999999854221 22344556666666
No 174
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.20 E-value=2.3e-11 Score=114.15 Aligned_cols=107 Identities=16% Similarity=0.126 Sum_probs=82.6
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAII 147 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi 147 (299)
+.+.|||||||+|.++..+++. +.++|++||.++ +++.|++....++ + ..+++++.+|..+.- . ++++|+||
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~a-GA~~V~ave~s~-~~~~a~~~~~~n~--~-~~~i~~i~~~~~~~~--l-pe~~Dviv 154 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQA-GARRVYAVEASA-IWQQAREVVRFNG--L-EDRVHVLPGPVETVE--L-PEQVDAIV 154 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-THHHHHHHHHHTT--C-TTTEEEEESCTTTCC--C-SSCEEEEE
T ss_pred CCCEEEEeCCCccHHHHHHHHh-CCCEEEEEeChH-HHHHHHHHHHHcC--C-CceEEEEeeeeeeec--C-CccccEEE
Confidence 4678999999999999888876 567999999996 8899998876652 2 468999999987652 3 57899999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 148 IDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 148 ~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
+.........+.+ ...++....+.|+|||+++-+.
T Consensus 155 sE~~~~~l~~e~~-l~~~l~a~~r~Lkp~G~~iP~~ 189 (376)
T 4hc4_A 155 SEWMGYGLLHESM-LSSVLHARTKWLKEGGLLLPAS 189 (376)
T ss_dssp CCCCBTTBTTTCS-HHHHHHHHHHHEEEEEEEESCE
T ss_pred eecccccccccch-hhhHHHHHHhhCCCCceECCcc
Confidence 8765433322222 3677888889999999988543
No 175
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.20 E-value=2.3e-11 Score=106.28 Aligned_cols=110 Identities=11% Similarity=-0.053 Sum_probs=78.6
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECC-HHHHHHH---HhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCC
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEID-TMLINVY---KEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGT 142 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid-~~vi~~a---~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~ 142 (299)
.+..+|||||||+|..+..+++..+..+|++||++ +.|++.| ++..... .-++++++.+|+.++.... .+.
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~----~~~~v~~~~~d~~~l~~~~-~d~ 97 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKG----GLSNVVFVIAAAESLPFEL-KNI 97 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGT----CCSSEEEECCBTTBCCGGG-TTC
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHc----CCCCeEEEEcCHHHhhhhc-cCe
Confidence 35678999999999999999865456789999999 7787776 6665432 2357999999987763222 356
Q ss_pred ccEEEEcCCCCCCC-CCCCCcHHHHHHHHHhcCCCcEEEE
Q 037807 143 FDAIIIDAFDPIRP-GHDLFEGPFFELVAKALRPGGAMCI 181 (299)
Q Consensus 143 fDvIi~D~~~~~~~-~~~l~t~ef~~~~~~~LkpgGvlv~ 181 (299)
+|.|.+..+.+... .......++++.++++|||||.+++
T Consensus 98 v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 98 ADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp EEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred EEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 77777765432100 0001125789999999999999988
No 176
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.20 E-value=4.5e-11 Score=105.67 Aligned_cols=106 Identities=10% Similarity=0.100 Sum_probs=84.3
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
++..+|||||||+|.++..+++..+..+|+++|+|+.+++.|++++..++. ..+++++.+|+.+.+.. .++||+|
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl---~~~I~v~~gD~l~~~~~--~~~~D~I 94 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGL---TEQIDVRKGNGLAVIEK--KDAIDTI 94 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTC---TTTEEEEECSGGGGCCG--GGCCCEE
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC---CceEEEEecchhhccCc--cccccEE
Confidence 456799999999999999999876677999999999999999999876532 35899999999887642 2369998
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++..-. .. .-.+++....+.|+++|.|++|.
T Consensus 95 viagmG-----g~-lI~~IL~~~~~~L~~~~~lIlq~ 125 (244)
T 3gnl_A 95 VIAGMG-----GT-LIRTILEEGAAKLAGVTKLILQP 125 (244)
T ss_dssp EEEEEC-----HH-HHHHHHHHTGGGGTTCCEEEEEE
T ss_pred EEeCCc-----hH-HHHHHHHHHHHHhCCCCEEEEEc
Confidence 863111 00 12678888899999999999975
No 177
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.19 E-value=4e-11 Score=100.27 Aligned_cols=102 Identities=25% Similarity=0.283 Sum_probs=79.0
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
+++.+||+||||+|..+..+++.. .+++++|+++.+++.+++.++ +++++.+|+.+.. .+.++||+|
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~---------~~~~~~~d~~~~~--~~~~~~D~i 111 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQG--HDVLGTDLDPILIDYAKQDFP---------EARWVVGDLSVDQ--ISETDFDLI 111 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHCT---------TSEEEECCTTTSC--CCCCCEEEE
T ss_pred cCCCeEEEECCCCCHHHHHHHHCC--CcEEEEcCCHHHHHHHHHhCC---------CCcEEEcccccCC--CCCCceeEE
Confidence 467899999999999999999873 589999999999999998763 5889999987642 225789999
Q ss_pred EEcCC-CCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAF-DPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~-~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++... ....... ....+++.+.+.|+|||.+++..
T Consensus 112 ~~~~~~~~~~~~~--~~~~~l~~~~~~l~~~G~l~~~~ 147 (195)
T 3cgg_A 112 VSAGNVMGFLAED--GREPALANIHRALGADGRAVIGF 147 (195)
T ss_dssp EECCCCGGGSCHH--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCcHHhhcChH--HHHHHHHHHHHHhCCCCEEEEEe
Confidence 98621 1111000 01678999999999999999865
No 178
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.19 E-value=8e-11 Score=110.67 Aligned_cols=105 Identities=17% Similarity=0.196 Sum_probs=86.4
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhc-------------CCCCCCEEEEEccHHHH
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAI-------------GYEDSRVILHVCDGSEY 134 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~-------------~~~~~rv~v~~~D~~~~ 134 (299)
++.+|||+|||+|..+.++++..+..+|+++|+|+..++.+++++..+.. +. .+++++.+|+.++
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl--~~i~v~~~Da~~~ 124 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGE--KTIVINHDDANRL 124 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESS--SEEEEEESCHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCC--CceEEEcCcHHHH
Confidence 57899999999999999999874445799999999999999999876510 12 2399999999999
Q ss_pred HHhcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 135 LKTVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 135 l~~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
+... .++||+|++|++.. ..+|++.+.+.|++||++.+.+
T Consensus 125 ~~~~-~~~fD~I~lDP~~~--------~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 125 MAER-HRYFHFIDLDPFGS--------PMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHHS-TTCEEEEEECCSSC--------CHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHhc-cCCCCEEEeCCCCC--------HHHHHHHHHHhcCCCCEEEEEe
Confidence 8764 56899999986532 2789999999999999888754
No 179
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.19 E-value=2.7e-10 Score=102.36 Aligned_cols=108 Identities=13% Similarity=0.171 Sum_probs=80.9
Q ss_pred CCCeEEEEeccc---cHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHH--H-------
Q 037807 68 NPKKVLLIGGGD---GGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEY--L------- 135 (299)
Q Consensus 68 ~~~~VL~IG~G~---G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~--l------- 135 (299)
...+|||||||+ |.++..+.+..+..+|++||+||.|++.|++.+.. .++++++.+|+.+. +
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~------~~~v~~~~~D~~~~~~~~~~~~~~ 150 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK------DPNTAVFTADVRDPEYILNHPDVR 150 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT------CTTEEEEECCTTCHHHHHHSHHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC------CCCeEEEEeeCCCchhhhccchhh
Confidence 357999999999 98877666654457899999999999999998742 46899999998753 2
Q ss_pred HhcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 136 KTVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 136 ~~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
......+||+|++...-..-+.. -...+++.++++|+|||.|++..
T Consensus 151 ~~~d~~~~d~v~~~~vlh~~~d~--~~~~~l~~~~~~L~pGG~l~i~~ 196 (274)
T 2qe6_A 151 RMIDFSRPAAIMLVGMLHYLSPD--VVDRVVGAYRDALAPGSYLFMTS 196 (274)
T ss_dssp HHCCTTSCCEEEETTTGGGSCTT--THHHHHHHHHHHSCTTCEEEEEE
T ss_pred ccCCCCCCEEEEEechhhhCCcH--HHHHHHHHHHHhCCCCcEEEEEE
Confidence 11222589999986433222211 12789999999999999999865
No 180
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.19 E-value=5e-11 Score=112.42 Aligned_cols=104 Identities=24% Similarity=0.287 Sum_probs=87.3
Q ss_pred CCCeEEEEeccccHHHHHHHhc-CCccEEEEEECCHHHHHHHHhhchhhhcCCCCCC-EEEEEccHHHHHH-hcCCCCcc
Q 037807 68 NPKKVLLIGGGDGGILREISRH-ASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSR-VILHVCDGSEYLK-TVQSGTFD 144 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~r-v~v~~~D~~~~l~-~~~~~~fD 144 (299)
+..+|||+++|+|..+.++++. .+..+|++||+|+..++.+++++..++ + +.+ ++++.+|+.+++. .. .++||
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ng--l-~~~~v~v~~~Da~~~l~~~~-~~~fD 127 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNN--I-PEDRYEIHGMEANFFLRKEW-GFGFD 127 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTT--C-CGGGEEEECSCHHHHHHSCC-SSCEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhC--C-CCceEEEEeCCHHHHHHHhh-CCCCc
Confidence 3579999999999999999885 356799999999999999999988763 2 234 9999999999997 65 56899
Q ss_pred EEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 145 AIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 145 vIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
+|++|++.. ..+|++.+.+.|++||++.+.+
T Consensus 128 ~V~lDP~g~--------~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 128 YVDLDPFGT--------PVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EEEECCSSC--------CHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECCCcC--------HHHHHHHHHHHhCCCCEEEEEe
Confidence 999997321 1679999999999999988855
No 181
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.19 E-value=7.5e-11 Score=98.22 Aligned_cols=96 Identities=11% Similarity=0.138 Sum_probs=74.1
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAII 147 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi 147 (299)
++.+|||||||+|.++..+++.. +|++||+|+.+++. .++++++.+|+.+.+. +++||+|+
T Consensus 23 ~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~-------------~~~~~~~~~d~~~~~~---~~~fD~i~ 83 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES-------------HRGGNLVRADLLCSIN---QESVDVVV 83 (170)
T ss_dssp CSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT-------------CSSSCEEECSTTTTBC---GGGCSEEE
T ss_pred CCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc-------------ccCCeEEECChhhhcc---cCCCCEEE
Confidence 46799999999999999998874 89999999999987 1468999999877432 47899999
Q ss_pred EcCCCCCCCCC-----CCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 148 IDAFDPIRPGH-----DLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 148 ~D~~~~~~~~~-----~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++.+....... ..-..++++.+.+.| |||.+++..
T Consensus 84 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~ 123 (170)
T 3q87_B 84 FNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLV 123 (170)
T ss_dssp ECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEE
T ss_pred ECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEE
Confidence 97654321111 001256888999999 999998754
No 182
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.18 E-value=1.3e-10 Score=99.02 Aligned_cols=151 Identities=17% Similarity=0.225 Sum_probs=93.8
Q ss_pred HHHHHhhcccCCCCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHH
Q 037807 55 QEMITHLPLCSIPNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEY 134 (299)
Q Consensus 55 ~e~l~~~~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~ 134 (299)
.|++....+. ++..+|||||||+|+.+..+++. ..+|++||+++.. ..++++++.+|+.+.
T Consensus 14 ~ei~~~~~~~--~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~~---------------~~~~v~~~~~D~~~~ 74 (191)
T 3dou_A 14 EFLLDRYRVV--RKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEME---------------EIAGVRFIRCDIFKE 74 (191)
T ss_dssp HHHHHHHCCS--CTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCCC---------------CCTTCEEEECCTTSS
T ss_pred HHHHHHcCCC--CCCCEEEEEeecCCHHHHHHHHc--CCcEEEEeccccc---------------cCCCeEEEEccccCH
Confidence 4555544433 45689999999999999999987 4689999999741 135899999997542
Q ss_pred -----HHh-cC---CCCccEEEEcCCCCCCCCC---CC----CcHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHH
Q 037807 135 -----LKT-VQ---SGTFDAIIIDAFDPIRPGH---DL----FEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLID 198 (299)
Q Consensus 135 -----l~~-~~---~~~fDvIi~D~~~~~~~~~---~l----~t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~ 198 (299)
+.+ .. .++||+|++|......... .. .....++.+.+.|+|||.|++.. +..+....+..
T Consensus 75 ~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~----~~~~~~~~~~~ 150 (191)
T 3dou_A 75 TIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQ----FQGDMTNDFIA 150 (191)
T ss_dssp SHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE----ECSTHHHHHHH
T ss_pred HHHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEE----cCCCCHHHHHH
Confidence 111 10 1489999999743221100 00 01356778899999999999853 22233567788
Q ss_pred HHhhhcCCceeeeEEeecccCCcceeEEeccc
Q 037807 199 DCHRIFKGSASYAWTTVPTYPSGVIGFMLCST 230 (299)
Q Consensus 199 ~l~~~F~~~v~~~~~~vP~~~~g~w~~~~ask 230 (299)
.++..| ..+... ....+-+...=.|++|.+
T Consensus 151 ~l~~~F-~~v~~~-kP~asR~~s~E~y~v~~~ 180 (191)
T 3dou_A 151 IWRKNF-SSYKIS-KPPASRGSSSEIYIMFFG 180 (191)
T ss_dssp HHGGGE-EEEEEE-CC------CCEEEEEEEE
T ss_pred HHHHhc-CEEEEE-CCCCccCCCceEEEEEee
Confidence 888888 344321 111111222334677764
No 183
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.18 E-value=8.3e-11 Score=101.99 Aligned_cols=98 Identities=21% Similarity=0.273 Sum_probs=78.9
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.+..+|||||||+|..+..+++.. .+|++||+++.+++.+++++... .+++++.+|+.+.+.. .++||+|
T Consensus 69 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~------~~v~~~~~d~~~~~~~--~~~fD~v 138 (231)
T 1vbf_A 69 HKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYY------NNIKLILGDGTLGYEE--EKPYDRV 138 (231)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTC------SSEEEEESCGGGCCGG--GCCEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhc------CCeEEEECCccccccc--CCCccEE
Confidence 456799999999999999999874 68999999999999999987643 2899999998773331 4789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecC
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAE 184 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~ 184 (299)
+++..-+.. .+.+.+.|+|||++++...
T Consensus 139 ~~~~~~~~~----------~~~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 139 VVWATAPTL----------LCKPYEQLKEGGIMILPIG 166 (231)
T ss_dssp EESSBBSSC----------CHHHHHTEEEEEEEEEEEC
T ss_pred EECCcHHHH----------HHHHHHHcCCCcEEEEEEc
Confidence 987543311 2468899999999998653
No 184
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.18 E-value=3.1e-10 Score=96.38 Aligned_cols=96 Identities=22% Similarity=0.177 Sum_probs=74.7
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.++.+|||+|||+|.++..+++. +..+|++||+|+.+++.|++++. +++++.+|+.++ +++||+|
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~---------~~~~~~~d~~~~-----~~~~D~v 114 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCG---------GVNFMVADVSEI-----SGKYDTW 114 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCT---------TSEEEECCGGGC-----CCCEEEE
T ss_pred CCCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcC---------CCEEEECcHHHC-----CCCeeEE
Confidence 45789999999999999999887 45689999999999999999863 689999998763 3689999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEE
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCI 181 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~ 181 (299)
++|.+-...... ....+++.+.+.| |+++++
T Consensus 115 ~~~~p~~~~~~~--~~~~~l~~~~~~~--g~~~~~ 145 (200)
T 1ne2_A 115 IMNPPFGSVVKH--SDRAFIDKAFETS--MWIYSI 145 (200)
T ss_dssp EECCCC---------CHHHHHHHHHHE--EEEEEE
T ss_pred EECCCchhccCc--hhHHHHHHHHHhc--CcEEEE
Confidence 998764332211 1367899999998 555554
No 185
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.18 E-value=5.2e-11 Score=104.04 Aligned_cols=102 Identities=24% Similarity=0.259 Sum_probs=78.9
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.+..+|||||||+|..+..+++..+ .+|+++|+++.+++.|++++... .-++++++.+|+..-+.. ..+||+|
T Consensus 90 ~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~----~~~~v~~~~~d~~~~~~~--~~~fD~I 162 (235)
T 1jg1_A 90 KPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERA----GVKNVHVILGDGSKGFPP--KAPYDVI 162 (235)
T ss_dssp CTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHT----TCCSEEEEESCGGGCCGG--GCCEEEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHc----CCCCcEEEECCcccCCCC--CCCccEE
Confidence 3567999999999999999998644 68999999999999999987654 224699999998332221 3469999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCC
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAES 185 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s 185 (299)
+++...+. +.+.+.+.|+|||++++..++
T Consensus 163 i~~~~~~~----------~~~~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 163 IVTAGAPK----------IPEPLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp EECSBBSS----------CCHHHHHTEEEEEEEEEEECS
T ss_pred EECCcHHH----------HHHHHHHhcCCCcEEEEEEec
Confidence 98754432 124688999999999986644
No 186
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.17 E-value=3.7e-11 Score=111.60 Aligned_cols=108 Identities=18% Similarity=0.147 Sum_probs=81.4
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAII 147 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi 147 (299)
+..+|||||||+|.++..+++. +..+|++||+++ +++.|++.+...+ + .++++++.+|+.++- . +++||+|+
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~--l-~~~v~~~~~d~~~~~--~-~~~~D~Iv 121 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSNN--L-TDRIVVIPGKVEEVS--L-PEQVDIII 121 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTT--C-TTTEEEEESCTTTCC--C-SSCEEEEE
T ss_pred CcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHH-HHHHHHHHHHHcC--C-CCcEEEEEcchhhCC--C-CCceeEEE
Confidence 5689999999999999999887 457999999997 8899998876542 1 368999999987642 2 46899999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCC
Q 037807 148 IDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAES 185 (299)
Q Consensus 148 ~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s 185 (299)
++.......... ..+.+..+++.|+|||+++.+..+
T Consensus 122 s~~~~~~~~~~~--~~~~l~~~~~~LkpgG~li~~~~~ 157 (348)
T 2y1w_A 122 SEPMGYMLFNER--MLESYLHAKKYLKPSGNMFPTIGD 157 (348)
T ss_dssp ECCCBTTBTTTS--HHHHHHHGGGGEEEEEEEESCEEE
T ss_pred EeCchhcCChHH--HHHHHHHHHhhcCCCeEEEEecCc
Confidence 975422111111 256788889999999999865433
No 187
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.17 E-value=2e-11 Score=103.83 Aligned_cols=113 Identities=11% Similarity=0.087 Sum_probs=79.9
Q ss_pred hHHHHHHhhcccCCCCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHH
Q 037807 53 AYQEMITHLPLCSIPNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGS 132 (299)
Q Consensus 53 ~Y~e~l~~~~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~ 132 (299)
.|.....++ +.+.+|||||||+|.++..++...+..+|+++|+|+.+++.+++++...+. ..++++ .|..
T Consensus 39 fY~~~~~~l-----~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~---~~~v~~--~d~~ 108 (200)
T 3fzg_A 39 FYTYVFGNI-----KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKT---TIKYRF--LNKE 108 (200)
T ss_dssp HHHHHHHHS-----CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCC---SSEEEE--ECCH
T ss_pred HHHHHHhhc-----CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCC---CccEEE--eccc
Confidence 466666654 458899999999999999998754455999999999999999999876421 114554 6665
Q ss_pred HHHHhcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 133 EYLKTVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 133 ~~l~~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
... +.++||+|+.-..-+.-... +.....+.+.|+|||++|..
T Consensus 109 ~~~---~~~~~DvVLa~k~LHlL~~~----~~al~~v~~~L~pggvfISf 151 (200)
T 3fzg_A 109 SDV---YKGTYDVVFLLKMLPVLKQQ----DVNILDFLQLFHTQNFVISF 151 (200)
T ss_dssp HHH---TTSEEEEEEEETCHHHHHHT----TCCHHHHHHTCEEEEEEEEE
T ss_pred ccC---CCCCcChhhHhhHHHhhhhh----HHHHHHHHHHhCCCCEEEEe
Confidence 543 36789999984332210000 11234799999999999974
No 188
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.17 E-value=1.3e-11 Score=114.45 Aligned_cols=107 Identities=18% Similarity=0.213 Sum_probs=83.3
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAII 147 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi 147 (299)
...+|||||||+|.++..+++..+..+|+++|+|+.+++.+++++... ..+++++.+|+.++. +++||+|+
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~-----~~~~~~~~~d~~~~~----~~~fD~Iv 266 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAAN-----GVEGEVFASNVFSEV----KGRFDMII 266 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHT-----TCCCEEEECSTTTTC----CSCEEEEE
T ss_pred CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHh-----CCCCEEEEccccccc----cCCeeEEE
Confidence 356899999999999999998754558999999999999999988754 234678899987643 56899999
Q ss_pred EcCCCCCCCC-CCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 148 IDAFDPIRPG-HDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 148 ~D~~~~~~~~-~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++.+-..+.. ..-....+++.+.+.|+|||.+++..
T Consensus 267 ~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 303 (343)
T 2pjd_A 267 SNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVA 303 (343)
T ss_dssp ECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred ECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 9865443211 00012678999999999999998854
No 189
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.17 E-value=3.3e-11 Score=102.99 Aligned_cols=98 Identities=18% Similarity=0.215 Sum_probs=77.1
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAII 147 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi 147 (299)
+..+|||||||+|..+..+ +..+++++|+++.+++.+++.+ ++++++.+|+.+.. .++++||+|+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l----~~~~v~~vD~s~~~~~~a~~~~---------~~~~~~~~d~~~~~--~~~~~fD~v~ 100 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL----PYPQKVGVEPSEAMLAVGRRRA---------PEATWVRAWGEALP--FPGESFDVVL 100 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC----CCSEEEEECCCHHHHHHHHHHC---------TTSEEECCCTTSCC--SCSSCEEEEE
T ss_pred CCCeEEEECCCCCHhHHhC----CCCeEEEEeCCHHHHHHHHHhC---------CCcEEEEcccccCC--CCCCcEEEEE
Confidence 6789999999999999887 3348999999999999999875 36788889876532 2257899999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecC
Q 037807 148 IDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAE 184 (299)
Q Consensus 148 ~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~ 184 (299)
+...-...+. ...+++.+.+.|+|||.+++...
T Consensus 101 ~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~i~~~ 133 (211)
T 2gs9_A 101 LFTTLEFVED----VERVLLEARRVLRPGGALVVGVL 133 (211)
T ss_dssp EESCTTTCSC----HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EcChhhhcCC----HHHHHHHHHHHcCCCCEEEEEec
Confidence 8643322211 26899999999999999998653
No 190
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.16 E-value=1.7e-10 Score=110.98 Aligned_cols=114 Identities=12% Similarity=0.170 Sum_probs=88.6
Q ss_pred CCCCeEEEEeccccHHHHHHHhc-CCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccE
Q 037807 67 PNPKKVLLIGGGDGGILREISRH-ASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDA 145 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDv 145 (299)
.+..+|||+|||+|+.+..+++. ++..+|+++|+|+.+++.+++++...+ -. ++++.+|+.++.... .++||+
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G----~~-v~~~~~Da~~l~~~~-~~~FD~ 173 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWG----AP-LAVTQAPPRALAEAF-GTYFHR 173 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHC----CC-CEEECSCHHHHHHHH-CSCEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----Ce-EEEEECCHHHhhhhc-cccCCE
Confidence 45689999999999999999875 334689999999999999999987652 23 899999999876534 678999
Q ss_pred EEEcCCCCC-C----CCCCCC-------------cHHHHHHHHHhcCCCcEEEEecCCc
Q 037807 146 IIIDAFDPI-R----PGHDLF-------------EGPFFELVAKALRPGGAMCIQAESL 186 (299)
Q Consensus 146 Ii~D~~~~~-~----~~~~l~-------------t~ef~~~~~~~LkpgGvlv~~~~s~ 186 (299)
|++|++... + .+...+ ..++++.+.+.|||||+|+..+.+.
T Consensus 174 Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 174 VLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp EEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred EEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 999987521 1 011111 1678899999999999999876443
No 191
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.16 E-value=2.8e-11 Score=105.08 Aligned_cols=101 Identities=17% Similarity=0.294 Sum_probs=78.0
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
+++.+|||||||+|..+..+++.. .+|+++|+++.+++.+++.+ ++++++.+|+.++. . +++||+|
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~~D~s~~~~~~a~~~~---------~~~~~~~~d~~~~~--~-~~~~D~v 104 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF--GDTAGLELSEDMLTHARKRL---------PDATLHQGDMRDFR--L-GRKFSAV 104 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH--SEEEEEESCHHHHHHHHHHC---------TTCEEEECCTTTCC--C-SSCEEEE
T ss_pred CCCCeEEEecccCCHHHHHHHHhC--CcEEEEeCCHHHHHHHHHhC---------CCCEEEECCHHHcc--c-CCCCcEE
Confidence 467899999999999999998874 38999999999999999875 36899999987642 2 5789999
Q ss_pred EEcC--CCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDA--FDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~--~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++.. ........ -...+++.+++.|+|||.+++..
T Consensus 105 ~~~~~~~~~~~~~~--~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 105 VSMFSSVGYLKTTE--ELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp EECTTGGGGCCSHH--HHHHHHHHHHHTEEEEEEEEECC
T ss_pred EEcCchHhhcCCHH--HHHHHHHHHHHhcCCCeEEEEEe
Confidence 9532 11110000 12578999999999999999853
No 192
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.16 E-value=6.7e-11 Score=108.99 Aligned_cols=107 Identities=16% Similarity=0.154 Sum_probs=81.2
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAII 147 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi 147 (299)
+.++|||||||+|.++..+++. +..+|++||++ .+++.|++.+...+ + .++++++.+|+.++. .+.++||+|+
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s-~~~~~a~~~~~~~~--~-~~~i~~~~~d~~~~~--~~~~~~D~Iv 110 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMS-SIIEMAKELVELNG--F-SDKITLLRGKLEDVH--LPFPKVDIII 110 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESS-THHHHHHHHHHHTT--C-TTTEEEEESCTTTSC--CSSSCEEEEE
T ss_pred CCCEEEEecCccHHHHHHHHHC-CCCEEEEEChH-HHHHHHHHHHHHcC--C-CCCEEEEECchhhcc--CCCCcccEEE
Confidence 5679999999999999999887 45689999999 58999999876542 1 358999999987652 2247899999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 148 IDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 148 ~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
++.......... ....++..+.+.|+|||+++.+
T Consensus 111 s~~~~~~l~~~~-~~~~~l~~~~~~LkpgG~li~~ 144 (328)
T 1g6q_1 111 SEWMGYFLLYES-MMDTVLYARDHYLVEGGLIFPD 144 (328)
T ss_dssp ECCCBTTBSTTC-CHHHHHHHHHHHEEEEEEEESC
T ss_pred EeCchhhcccHH-HHHHHHHHHHhhcCCCeEEEEe
Confidence 975432211111 1257888999999999999843
No 193
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.15 E-value=5.7e-11 Score=102.19 Aligned_cols=114 Identities=13% Similarity=0.058 Sum_probs=76.0
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.+..+|||||||+|..+..+++..+..+|++||+++.+++.+.+...........++++++.+|+.+.-. ..+. |.|
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~--~~~~-d~v 102 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPP--LSGV-GEL 102 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCS--CCCE-EEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCC--CCCC-CEE
Confidence 3567899999999999999998755679999999999888533222111000123589999999877322 2344 777
Q ss_pred EEcCCCCCCC-CCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRP-GHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~-~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
.+........ ...--...+++.+++.|||||.+++..
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 103 HVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp EEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEe
Confidence 7543211000 000001678999999999999999854
No 194
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.15 E-value=1.5e-10 Score=101.80 Aligned_cols=125 Identities=12% Similarity=0.071 Sum_probs=82.6
Q ss_pred CCCCCeEEEEeccccHHHHHHHhc-CCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHH-hcCCCCc
Q 037807 66 IPNPKKVLLIGGGDGGILREISRH-ASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLK-TVQSGTF 143 (299)
Q Consensus 66 ~~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~-~~~~~~f 143 (299)
..+..+|||+|||+|+.+..+++. .+..+|++||+++.+++...+.... .+++.++.+|+..... ....++|
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~------r~nv~~i~~Da~~~~~~~~~~~~~ 147 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR------RPNIFPLLADARFPQSYKSVVENV 147 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH------CTTEEEEECCTTCGGGTTTTCCCE
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh------cCCeEEEEcccccchhhhccccce
Confidence 345689999999999999999875 3356899999999887544332221 2579999999875321 1114689
Q ss_pred cEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCCcc-----cchHHHHHHHHHHhh
Q 037807 144 DAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAESLW-----FQQFSVQHLIDDCHR 202 (299)
Q Consensus 144 DvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s~~-----~~~~~~~~~~~~l~~ 202 (299)
|+|++|.+.+.. ..-+...+.+.|||||.|++...+.. ...+.+....+.|++
T Consensus 148 D~I~~d~a~~~~------~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~ 205 (232)
T 3id6_C 148 DVLYVDIAQPDQ------TDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLEN 205 (232)
T ss_dssp EEEEECCCCTTH------HHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHH
T ss_pred EEEEecCCChhH------HHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHH
Confidence 999999765321 12344566669999999997542211 112344556666654
No 195
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.14 E-value=9.5e-11 Score=105.75 Aligned_cols=111 Identities=23% Similarity=0.233 Sum_probs=74.5
Q ss_pred CCCeEEEEeccccHHHHHH----Hh-cCCcc-EEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHh----
Q 037807 68 NPKKVLLIGGGDGGILREI----SR-HASVE-QIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKT---- 137 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l----~~-~~~~~-~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~---- 137 (299)
++.+|||||||+|.++..+ +. .+.+. .+++||++++|++.|++.+.... ...+-++.+..+|+.++...
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTS-NLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCS-SCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhcc-CCCcceEEEEecchhhhhhhhccc
Confidence 4569999999999765543 32 23332 34999999999999998864310 11122345567777665421
Q ss_pred cCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 138 VQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 138 ~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
.++++||+|++...-..-+. -..+++.++++|||||.+++..
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d----~~~~l~~~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKD----IPATLKFFHSLLGTNAKMLIIV 172 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSC----HHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCCceeEEEEeeeeeecCC----HHHHHHHHHHHcCCCcEEEEEE
Confidence 12578999998543222111 1678999999999999999854
No 196
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.14 E-value=8.3e-11 Score=104.20 Aligned_cols=102 Identities=18% Similarity=0.277 Sum_probs=78.1
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
+++.+|||||||+|..+..+++.. .+|++||+|+.+++.+++... .+ ++.+|+.+.. .++++||+|
T Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~--------~~--~~~~d~~~~~--~~~~~fD~v 118 (260)
T 2avn_A 53 KNPCRVLDLGGGTGKWSLFLQERG--FEVVLVDPSKEMLEVAREKGV--------KN--VVEAKAEDLP--FPSGAFEAV 118 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHHTTT--CEEEEEESCHHHHHHHHHHTC--------SC--EEECCTTSCC--SCTTCEEEE
T ss_pred CCCCeEEEeCCCcCHHHHHHHHcC--CeEEEEeCCHHHHHHHHhhcC--------CC--EEECcHHHCC--CCCCCEEEE
Confidence 467899999999999999998873 589999999999999998753 12 7888876532 235789999
Q ss_pred EEcCC-CCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCCc
Q 037807 147 IIDAF-DPIRPGHDLFEGPFFELVAKALRPGGAMCIQAESL 186 (299)
Q Consensus 147 i~D~~-~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s~ 186 (299)
++... ....+. ...+++.+++.|+|||.+++...+.
T Consensus 119 ~~~~~~~~~~~~----~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 119 LALGDVLSYVEN----KDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp EECSSHHHHCSC----HHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred EEcchhhhcccc----HHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 98531 111111 2789999999999999999876443
No 197
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.13 E-value=3e-11 Score=110.05 Aligned_cols=116 Identities=15% Similarity=0.121 Sum_probs=82.6
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcC---CCCCCEEEEEccHHHHHH--hc--C
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIG---YEDSRVILHVCDGSEYLK--TV--Q 139 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~---~~~~rv~v~~~D~~~~l~--~~--~ 139 (299)
+++.+|||||||+|..+..+++.+ ..+|+++|+++.+++.|++.+...... ....+++++.+|+.+... .. +
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 111 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKGR-INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDP 111 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSST
T ss_pred CCCCEEEEECCCCcHHHHHHHhcC-CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccC
Confidence 357899999999999999998764 578999999999999999987643110 013479999999876520 01 1
Q ss_pred CCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 140 SGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 140 ~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
.++||+|++...-+......-....+++.++++|+|||++++..
T Consensus 112 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (313)
T 3bgv_A 112 QMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTT 155 (313)
T ss_dssp TCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 35899999865332210000001578999999999999999865
No 198
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.13 E-value=6.2e-11 Score=101.85 Aligned_cols=101 Identities=17% Similarity=0.101 Sum_probs=77.7
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.++.+|||||||+|..+..+++. + .+++++|+++.+++.+++.+. +++.+|+.++....++++||+|
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~-~~~~~~D~~~~~~~~~~~~~~-----------~~~~~d~~~~~~~~~~~~fD~v 97 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G-TRVSGIEAFPEAAEQAKEKLD-----------HVVLGDIETMDMPYEEEQFDCV 97 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T-CEEEEEESSHHHHHHHHTTSS-----------EEEESCTTTCCCCSCTTCEEEE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHhCC-----------cEEEcchhhcCCCCCCCccCEE
Confidence 46789999999999999999988 4 689999999999999987642 5778887653222235789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecC
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAE 184 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~ 184 (299)
++...-...+. ...+++.+++.|+|||.+++...
T Consensus 98 ~~~~~l~~~~~----~~~~l~~~~~~L~~gG~l~~~~~ 131 (230)
T 3cc8_A 98 IFGDVLEHLFD----PWAVIEKVKPYIKQNGVILASIP 131 (230)
T ss_dssp EEESCGGGSSC----HHHHHHHTGGGEEEEEEEEEEEE
T ss_pred EECChhhhcCC----HHHHHHHHHHHcCCCCEEEEEeC
Confidence 98532211111 16899999999999999998653
No 199
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.13 E-value=1.5e-10 Score=110.50 Aligned_cols=108 Identities=12% Similarity=0.093 Sum_probs=79.1
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHH-------HhhchhhhcCCCCCCEEEEEccHHH---HHH
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVY-------KEYFPEIAIGYEDSRVILHVCDGSE---YLK 136 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a-------~~~~~~~~~~~~~~rv~v~~~D~~~---~l~ 136 (299)
....+|||||||+|.++..+++..+..+|++||+++.+++.| ++++...+ ..-.+++++.+|... .+.
T Consensus 241 ~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~G--l~~~nV~~i~gD~~~~~~~~~ 318 (433)
T 1u2z_A 241 KKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYG--MRLNNVEFSLKKSFVDNNRVA 318 (433)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTT--BCCCCEEEEESSCSTTCHHHH
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcC--CCCCceEEEEcCccccccccc
Confidence 457899999999999999999864456899999999999999 66665431 112589999986542 122
Q ss_pred hcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 137 TVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 137 ~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
.. .+.||+|+++..-. .+. -...++.+.+.|+|||.+++.
T Consensus 319 ~~-~~~FDvIvvn~~l~-~~d----~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 319 EL-IPQCDVILVNNFLF-DED----LNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp HH-GGGCSEEEECCTTC-CHH----HHHHHHHHHTTCCTTCEEEES
T ss_pred cc-cCCCCEEEEeCccc-ccc----HHHHHHHHHHhCCCCeEEEEe
Confidence 11 36799999863321 111 146788999999999999984
No 200
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.13 E-value=1.1e-10 Score=104.23 Aligned_cols=109 Identities=11% Similarity=0.143 Sum_probs=75.8
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHH-HHHhcCCCCccE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSE-YLKTVQSGTFDA 145 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~-~l~~~~~~~fDv 145 (299)
++..+|||||||+|.++..+++.. .+|++||+|+.|++.|++++... .+.....|... ..... .++||+
T Consensus 44 ~~g~~VLDlGcGtG~~a~~La~~g--~~V~gvD~S~~ml~~Ar~~~~~~-------~v~~~~~~~~~~~~~~~-~~~fD~ 113 (261)
T 3iv6_A 44 VPGSTVAVIGASTRFLIEKALERG--ASVTVFDFSQRMCDDLAEALADR-------CVTIDLLDITAEIPKEL-AGHFDF 113 (261)
T ss_dssp CTTCEEEEECTTCHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHTSSS-------CCEEEECCTTSCCCGGG-TTCCSE
T ss_pred CCcCEEEEEeCcchHHHHHHHhcC--CEEEEEECCHHHHHHHHHHHHhc-------cceeeeeeccccccccc-CCCccE
Confidence 456899999999999999999874 58999999999999999987531 23333333211 00112 568999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCCccc
Q 037807 146 IIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAESLWF 188 (299)
Q Consensus 146 Ii~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s~~~ 188 (299)
|+++..-....... ...+++.+.+.| |||+++++.....+
T Consensus 114 Vv~~~~l~~~~~~~--~~~~l~~l~~lL-PGG~l~lS~~~g~~ 153 (261)
T 3iv6_A 114 VLNDRLINRFTTEE--ARRACLGMLSLV-GSGTVRASVKLGFY 153 (261)
T ss_dssp EEEESCGGGSCHHH--HHHHHHHHHHHH-TTSEEEEEEEBSCC
T ss_pred EEEhhhhHhCCHHH--HHHHHHHHHHhC-cCcEEEEEeccCcc
Confidence 99975322111000 145889999999 99999987644333
No 201
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.13 E-value=2.5e-11 Score=107.14 Aligned_cols=82 Identities=12% Similarity=0.090 Sum_probs=63.4
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHH-HHHhcC---CCCc
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSE-YLKTVQ---SGTF 143 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~-~l~~~~---~~~f 143 (299)
++.+|||||||+|.++..+++..+..+|++||+|+.+++.|++++...+ + ..+++++.+|+.+ ++...+ +++|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~-~~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNN--L-SDLIKVVKVPQKTLLMDALKEESEIIY 141 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTT--C-TTTEEEEECCTTCSSTTTSTTCCSCCB
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcC--C-CccEEEEEcchhhhhhhhhhcccCCcc
Confidence 4679999999999999998875333689999999999999999886542 1 3479999999765 222221 2589
Q ss_pred cEEEEcCCC
Q 037807 144 DAIIIDAFD 152 (299)
Q Consensus 144 DvIi~D~~~ 152 (299)
|+|+++++.
T Consensus 142 D~i~~npp~ 150 (254)
T 2h00_A 142 DFCMCNPPF 150 (254)
T ss_dssp SEEEECCCC
T ss_pred cEEEECCCC
Confidence 999998654
No 202
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.12 E-value=2.4e-10 Score=109.83 Aligned_cols=115 Identities=18% Similarity=0.165 Sum_probs=88.7
Q ss_pred CCCCeEEEEeccccHHHHHHHhc-CCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccE
Q 037807 67 PNPKKVLLIGGGDGGILREISRH-ASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDA 145 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDv 145 (299)
.+..+|||+|||+|+.+..+++. ++..+|+++|+|+..++.+++++...+ -.++.++.+|+.++.... +++||+
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g----~~nv~v~~~Da~~l~~~~-~~~FD~ 178 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWG----VSNAIVTNHAPAELVPHF-SGFFDR 178 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHT----CSSEEEECCCHHHHHHHH-TTCEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcC----CCceEEEeCCHHHhhhhc-cccCCE
Confidence 45689999999999999999874 444689999999999999999987662 247999999999886544 578999
Q ss_pred EEEcCCCCC-CC---CC---------CC-----CcHHHHHHHHHhcCCCcEEEEecCCc
Q 037807 146 IIIDAFDPI-RP---GH---------DL-----FEGPFFELVAKALRPGGAMCIQAESL 186 (299)
Q Consensus 146 Ii~D~~~~~-~~---~~---------~l-----~t~ef~~~~~~~LkpgGvlv~~~~s~ 186 (299)
|++|++... +. .+ .+ ...++++.+.+.|||||+|+..+.+.
T Consensus 179 Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 179 IVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp EEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred EEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeec
Confidence 999986321 10 00 00 11378899999999999999866443
No 203
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.09 E-value=8.3e-11 Score=104.36 Aligned_cols=98 Identities=13% Similarity=0.115 Sum_probs=75.7
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
+++.+|||||||+|..+..+++. ..+|++||+++.+++.+++. ++++++.+|+.++- .++++||+|
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~----------~~~~~~~~d~~~~~--~~~~~fD~v 98 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALANQ--GLFVYAVEPSIVMRQQAVVH----------PQVEWFTGYAENLA--LPDKSVDGV 98 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHTT--TCEEEEECSCHHHHHSSCCC----------TTEEEECCCTTSCC--SCTTCBSEE
T ss_pred CCCCEEEEEcCcccHHHHHHHhC--CCEEEEEeCCHHHHHHHHhc----------cCCEEEECchhhCC--CCCCCEeEE
Confidence 46789999999999999999883 36899999999999877653 37999999986632 235789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++...-...+. ...+++.+++.|| ||.+++..
T Consensus 99 ~~~~~l~~~~~----~~~~l~~~~~~Lk-gG~~~~~~ 130 (261)
T 3ege_A 99 ISILAIHHFSH----LEKSFQEMQRIIR-DGTIVLLT 130 (261)
T ss_dssp EEESCGGGCSS----HHHHHHHHHHHBC-SSCEEEEE
T ss_pred EEcchHhhccC----HHHHHHHHHHHhC-CcEEEEEE
Confidence 98643211111 2789999999999 99666544
No 204
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.09 E-value=6.4e-10 Score=104.05 Aligned_cols=102 Identities=11% Similarity=0.087 Sum_probs=79.1
Q ss_pred CCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCC--------
Q 037807 69 PKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQS-------- 140 (299)
Q Consensus 69 ~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~-------- 140 (299)
..+|||+|||+|.++..+++. ..+|++||+++.+++.|++++..++ -++++++.+|+.+++.....
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~--~~~V~gvd~~~~ai~~a~~n~~~ng----~~~v~~~~~d~~~~~~~~~~~~~~~~l~ 287 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARN--FDRVLATEIAKPSVAAAQYNIAANH----IDNVQIIRMAAEEFTQAMNGVREFNRLQ 287 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGG--SSEEEEECCCHHHHHHHHHHHHHTT----CCSEEEECCCSHHHHHHHSSCCCCTTGG
T ss_pred CCEEEEccCCCCHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcC----CCceEEEECCHHHHHHHHhhcccccccc
Confidence 578999999999999998875 3689999999999999999987652 24899999999998764322
Q ss_pred ------CCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCCc
Q 037807 141 ------GTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAESL 186 (299)
Q Consensus 141 ------~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s~ 186 (299)
.+||+|++|++... ....+.+.|+++|.++.-+.++
T Consensus 288 ~~~~~~~~fD~Vv~dPPr~g----------~~~~~~~~l~~~g~ivyvsc~p 329 (369)
T 3bt7_A 288 GIDLKSYQCETIFVDPPRSG----------LDSETEKMVQAYPRILYISCNP 329 (369)
T ss_dssp GSCGGGCCEEEEEECCCTTC----------CCHHHHHHHTTSSEEEEEESCH
T ss_pred ccccccCCCCEEEECcCccc----------cHHHHHHHHhCCCEEEEEECCH
Confidence 37999999976431 1234556677888888755444
No 205
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.09 E-value=1.8e-10 Score=107.41 Aligned_cols=110 Identities=15% Similarity=0.198 Sum_probs=81.1
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
..+.+|||||||+|..+..+++..+..+++++|+ +.+++.|++++...+ -.++++++.+|+.+.-... ++.||+|
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~-p~~~D~v 252 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLS---GSERIHGHGANLLDRDVPF-PTGFDAV 252 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCT---TGGGEEEEECCCCSSSCCC-CCCCSEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcC---cccceEEEEccccccCCCC-CCCcCEE
Confidence 3578999999999999999997544568999999 999999999876431 1358999999976530001 3689999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++...-..-+.. -...+++.+++.|+|||.+++..
T Consensus 253 ~~~~vlh~~~~~--~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 253 WMSQFLDCFSEE--EVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp EEESCSTTSCHH--HHHHHHHHHHHHCCTTCEEEEEE
T ss_pred EEechhhhCCHH--HHHHHHHHHHHhcCCCcEEEEEe
Confidence 985432211110 01468999999999999988743
No 206
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.09 E-value=2.9e-10 Score=101.03 Aligned_cols=110 Identities=14% Similarity=0.115 Sum_probs=77.8
Q ss_pred CCCCeEEEEeccccHHHHHHHhc-CCccEEEEEECCHH------HHHHHHhhchhhhcCCCCCCEEEEEcc-HHHHHHhc
Q 037807 67 PNPKKVLLIGGGDGGILREISRH-ASVEQIHICEIDTM------LINVYKEYFPEIAIGYEDSRVILHVCD-GSEYLKTV 138 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~------vi~~a~~~~~~~~~~~~~~rv~v~~~D-~~~~l~~~ 138 (299)
++..+|||||||+|..+..++++ .+..+|+++|+++. +++.|++++.... -.++++++.+| ........
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~~ 118 (275)
T 3bkx_A 42 KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGP---LGDRLTVHFNTNLSDDLGPI 118 (275)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTST---TGGGEEEECSCCTTTCCGGG
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcC---CCCceEEEECChhhhccCCC
Confidence 45789999999999999999986 34468999999997 9999999876431 12589999998 22111111
Q ss_pred CCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 139 QSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 139 ~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++++||+|++...-...+.. ..+.+.+++.++|||.+++..
T Consensus 119 ~~~~fD~v~~~~~l~~~~~~----~~~~~~~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 119 ADQHFDRVVLAHSLWYFASA----NALALLFKNMAAVCDHVDVAE 159 (275)
T ss_dssp TTCCCSEEEEESCGGGSSCH----HHHHHHHHHHTTTCSEEEEEE
T ss_pred CCCCEEEEEEccchhhCCCH----HHHHHHHHHHhCCCCEEEEEE
Confidence 25789999985432211111 446667777777799998864
No 207
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.08 E-value=3.4e-10 Score=102.60 Aligned_cols=127 Identities=15% Similarity=0.100 Sum_probs=84.4
Q ss_pred EEEEcCee-eccCcchhhHHHHHHhhcccCCCCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhh
Q 037807 37 VFVLDGAL-QLTEKDECAYQEMITHLPLCSIPNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEI 115 (299)
Q Consensus 37 ~l~ldg~~-q~~~~de~~Y~e~l~~~~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~ 115 (299)
.+.++|.. .+-++..+...+++..+.+ .....+|||||||+|.++..++++ +..+|++||+++.|++.+.+.
T Consensus 55 ~I~v~g~~~~yvsrg~~Kl~~~l~~~~~--~~~g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r~---- 127 (291)
T 3hp7_A 55 ELKLKGEKLRYVSRGGLKLEKALAVFNL--SVEDMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKLRQ---- 127 (291)
T ss_dssp CEEETTCCCCSSSTTHHHHHHHHHHTTC--CCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHHHT----
T ss_pred EEEEcccccccccchHHHHHHHHHhcCC--CccccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHHHh----
Confidence 35555542 2333444444556655433 235679999999999999999887 467899999999999985542
Q ss_pred hcCCCCCCEEEEE-ccHHHHHH-hcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 116 AIGYEDSRVILHV-CDGSEYLK-TVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 116 ~~~~~~~rv~v~~-~D~~~~l~-~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
++++.... .|++..-. ..+...||+|++|..... ...++..+++.|+|||.+++-
T Consensus 128 -----~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~s-------l~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 128 -----DDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFIS-------LNLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp -----CTTEEEECSCCGGGCCGGGCTTCCCSEEEECCSSSC-------GGGTHHHHHHHSCTTCEEEEE
T ss_pred -----CcccceecccCceecchhhCCCCCCCEEEEEeeHhh-------HHHHHHHHHHHcCcCCEEEEE
Confidence 34544332 33332211 122345999999875431 266899999999999998874
No 208
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.08 E-value=5.6e-10 Score=94.50 Aligned_cols=119 Identities=18% Similarity=0.123 Sum_probs=80.0
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCC--ccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHH---------
Q 037807 67 PNPKKVLLIGGGDGGILREISRHAS--VEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYL--------- 135 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~--~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l--------- 135 (299)
++..+|||||||+|..+..++++.+ ..+|++||+++.. ..++++++.+|+.+..
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~---------------~~~~v~~~~~d~~~~~~~~~~~~~~ 85 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD---------------PIPNVYFIQGEIGKDNMNNIKNINY 85 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC---------------CCTTCEEEECCTTTTSSCCC-----
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC---------------CCCCceEEEccccchhhhhhccccc
Confidence 4567999999999999999997643 4789999999931 1246888888876532
Q ss_pred -------------H-hcCCCCccEEEEcCCCCCCCC--CCCC-----cHHHHHHHHHhcCCCcEEEEecCCcccchHHHH
Q 037807 136 -------------K-TVQSGTFDAIIIDAFDPIRPG--HDLF-----EGPFFELVAKALRPGGAMCIQAESLWFQQFSVQ 194 (299)
Q Consensus 136 -------------~-~~~~~~fDvIi~D~~~~~~~~--~~l~-----t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~ 194 (299)
. ..++++||+|+++...+.... .... ...+++.+.+.|+|||.|++.... .+...
T Consensus 86 i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~----~~~~~ 161 (201)
T 2plw_A 86 IDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYL----GSQTN 161 (201)
T ss_dssp ------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC----STTHH
T ss_pred cccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC----CCCHH
Confidence 0 022468999999865332110 0000 023688899999999999985421 12245
Q ss_pred HHHHHHhhhc
Q 037807 195 HLIDDCHRIF 204 (299)
Q Consensus 195 ~~~~~l~~~F 204 (299)
.+...++..|
T Consensus 162 ~l~~~l~~~f 171 (201)
T 2plw_A 162 NLKTYLKGMF 171 (201)
T ss_dssp HHHHHHHTTE
T ss_pred HHHHHHHHHH
Confidence 5666777767
No 209
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.08 E-value=3.5e-11 Score=106.08 Aligned_cols=115 Identities=10% Similarity=0.097 Sum_probs=79.3
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCC-------------------------CC
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYE-------------------------DS 122 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~-------------------------~~ 122 (299)
++.+|||||||+|..+..+++.. ..+|+++|+++.+++.+++.+......++ ..
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACES-FTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGT-EEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhcc-cCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 45789999999999999888764 36899999999999999988753210000 01
Q ss_pred CE-EEEEccHHHHHH--hcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 123 RV-ILHVCDGSEYLK--TVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 123 rv-~v~~~D~~~~l~--~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++ +++.+|+.+... ....++||+|++...-...++..--...+++.+.++|+|||.+++..
T Consensus 135 ~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 198 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVD 198 (265)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEe
Confidence 27 899999876432 11127899999853211000000012678999999999999998754
No 210
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.08 E-value=1.6e-10 Score=102.53 Aligned_cols=95 Identities=19% Similarity=0.212 Sum_probs=76.2
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
++..+|||||||+|..+..+++..+..+|+++|+++.+++.|++.. ++++++.+|+.+.. .++++||+|
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~---------~~~~~~~~d~~~~~--~~~~~fD~v 152 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY---------PQVTFCVASSHRLP--FSDTSMDAI 152 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC---------TTSEEEECCTTSCS--BCTTCEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC---------CCcEEEEcchhhCC--CCCCceeEE
Confidence 4568999999999999999998643468999999999999999864 36788999976532 225789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++... ..+++.+.+.|+|||.+++..
T Consensus 153 ~~~~~-----------~~~l~~~~~~L~pgG~l~~~~ 178 (269)
T 1p91_A 153 IRIYA-----------PCKAEELARVVKPGGWVITAT 178 (269)
T ss_dssp EEESC-----------CCCHHHHHHHEEEEEEEEEEE
T ss_pred EEeCC-----------hhhHHHHHHhcCCCcEEEEEE
Confidence 97432 125889999999999998865
No 211
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.08 E-value=2.6e-09 Score=102.04 Aligned_cols=103 Identities=13% Similarity=0.075 Sum_probs=80.4
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHh--cCCCCcc
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKT--VQSGTFD 144 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~--~~~~~fD 144 (299)
....+|||+|||+|.++..+++. ..+|++||+++.+++.|++++... .-++++++.+|+.+++.. ...++||
T Consensus 285 ~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~~----~~~~v~f~~~d~~~~l~~~~~~~~~fD 358 (433)
T 1uwv_A 285 QPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNARLN----GLQNVTFYHENLEEDVTKQPWAKNGFD 358 (433)
T ss_dssp CTTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHT----TCCSEEEEECCTTSCCSSSGGGTTCCS
T ss_pred CCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHHc----CCCceEEEECCHHHHhhhhhhhcCCCC
Confidence 35679999999999999999987 468999999999999999998654 224899999999886542 1246899
Q ss_pred EEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 145 AIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 145 vIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
+|++|++.... .++++.+. .++|++++.+.+
T Consensus 359 ~Vv~dPPr~g~-------~~~~~~l~-~~~p~~ivyvsc 389 (433)
T 1uwv_A 359 KVLLDPARAGA-------AGVMQQII-KLEPIRIVYVSC 389 (433)
T ss_dssp EEEECCCTTCC-------HHHHHHHH-HHCCSEEEEEES
T ss_pred EEEECCCCccH-------HHHHHHHH-hcCCCeEEEEEC
Confidence 99998665321 45666655 479999888744
No 212
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.07 E-value=4.7e-10 Score=108.57 Aligned_cols=114 Identities=24% Similarity=0.315 Sum_probs=88.2
Q ss_pred CCCeEEEEeccccHHHHHHHhcC-CccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHA-SVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
+..+|||+|||+|+.+..+++.- +..+|+++|+++.+++.+++++...+ -++++++.+|+.++.... .++||+|
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g----~~nv~~~~~D~~~~~~~~-~~~fD~I 191 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCG----ISNVALTHFDGRVFGAAV-PEMFDAI 191 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHT----CCSEEEECCCSTTHHHHS-TTCEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----CCcEEEEeCCHHHhhhhc-cccCCEE
Confidence 56799999999999999998753 34689999999999999999987652 347999999998875433 5789999
Q ss_pred EEcCCCCC-C----CCCC--CC-----------cHHHHHHHHHhcCCCcEEEEecCCc
Q 037807 147 IIDAFDPI-R----PGHD--LF-----------EGPFFELVAKALRPGGAMCIQAESL 186 (299)
Q Consensus 147 i~D~~~~~-~----~~~~--l~-----------t~ef~~~~~~~LkpgGvlv~~~~s~ 186 (299)
++|++... + .+.. .+ ..++++.+.+.|||||+|+..+.+.
T Consensus 192 l~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 192 LLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp EEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred EECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccC
Confidence 99976421 1 1111 11 2467888999999999999876443
No 213
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.07 E-value=4.9e-10 Score=106.91 Aligned_cols=115 Identities=18% Similarity=0.254 Sum_probs=87.1
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.+..+|||+|||+|+.+..+++..+..+|+++|+++.+++.+++++...+ .+++++.+|+.++....++++||+|
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g-----~~~~~~~~D~~~~~~~~~~~~fD~V 319 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLG-----MKATVKQGDGRYPSQWCGEQQFDRI 319 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTT-----CCCEEEECCTTCTHHHHTTCCEEEE
T ss_pred CCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcC-----CCeEEEeCchhhchhhcccCCCCEE
Confidence 35679999999999999999986444789999999999999999987652 2478999999776532324689999
Q ss_pred EEcCCCCC-CC---CCCC--------------CcHHHHHHHHHhcCCCcEEEEecCCc
Q 037807 147 IIDAFDPI-RP---GHDL--------------FEGPFFELVAKALRPGGAMCIQAESL 186 (299)
Q Consensus 147 i~D~~~~~-~~---~~~l--------------~t~ef~~~~~~~LkpgGvlv~~~~s~ 186 (299)
++|++... +. .+.. ...++++.+.+.|||||.++..+.+.
T Consensus 320 l~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 320 LLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp EEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred EEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 99986432 11 0000 01478899999999999999866443
No 214
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.06 E-value=1.9e-11 Score=108.83 Aligned_cols=114 Identities=14% Similarity=0.099 Sum_probs=75.9
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCC-------------------------CC
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYE-------------------------DS 122 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~-------------------------~~ 122 (299)
+..+|||||||+|..+..+++. +..+|+++|+|+.+++.|++++......++ ..
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~-~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACD-SFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRA 133 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGG-TEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHh-hhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHh
Confidence 4578999999999877766554 456899999999999999987643211110 01
Q ss_pred CEE-EEEccHHHHHH--hcCCCCccEEEEcCCCCC-CCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 123 RVI-LHVCDGSEYLK--TVQSGTFDAIIIDAFDPI-RPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 123 rv~-v~~~D~~~~l~--~~~~~~fDvIi~D~~~~~-~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
+++ ++.+|..+... ....++||+|++...-.. .+... --...+++++++|||||.|++..
T Consensus 134 ~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~-~~~~~l~~i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 134 AVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLD-AYRAALCNLASLLKPGGHLVTTV 197 (263)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHH-HHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHH-HHHHHHHHHHHHcCCCcEEEEEE
Confidence 344 88888766311 111468999998543211 11000 01467889999999999999864
No 215
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.04 E-value=4.9e-10 Score=102.86 Aligned_cols=106 Identities=14% Similarity=0.136 Sum_probs=80.4
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAII 147 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi 147 (299)
+..+|||||||+|..+..+++..+..+++++|+ +.+++.+++++...+ -.++++++.+|..+ .. +..||+|+
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~---~~-p~~~D~v~ 240 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTG---LSGRAQVVVGSFFD---PL-PAGAGGYV 240 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT---CTTTEEEEECCTTS---CC-CCSCSEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcC---cCcCeEEecCCCCC---CC-CCCCcEEE
Confidence 468999999999999999997555568999999 999999999876531 13689999999863 22 33899999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 148 IDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 148 ~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
+...-..-+.+ ....+++++++.|+|||.+++..
T Consensus 241 ~~~vlh~~~~~--~~~~~l~~~~~~L~pgG~l~i~e 274 (332)
T 3i53_A 241 LSAVLHDWDDL--SAVAILRRCAEAAGSGGVVLVIE 274 (332)
T ss_dssp EESCGGGSCHH--HHHHHHHHHHHHHTTTCEEEEEE
T ss_pred EehhhccCCHH--HHHHHHHHHHHhcCCCCEEEEEe
Confidence 84322111100 01578999999999999998753
No 216
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.04 E-value=8.5e-10 Score=103.04 Aligned_cols=107 Identities=15% Similarity=0.126 Sum_probs=81.0
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
++..+|||||||+|..+..+++..+..+++++|+ +.+++.+++++...+ -.++++++.+|..+ .. +..||+|
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~---l~~~v~~~~~d~~~---~~-p~~~D~v 272 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRG---LADRCEILPGDFFE---TI-PDGADVY 272 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT---CTTTEEEEECCTTT---CC-CSSCSEE
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcC---cCCceEEeccCCCC---CC-CCCceEE
Confidence 4578999999999999999998655568999999 999999999876531 14689999999873 22 3389999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++...-...+.. ....+++.+++.|+|||.+++..
T Consensus 273 ~~~~vlh~~~d~--~~~~~L~~~~~~L~pgG~l~i~e 307 (369)
T 3gwz_A 273 LIKHVLHDWDDD--DVVRILRRIATAMKPDSRLLVID 307 (369)
T ss_dssp EEESCGGGSCHH--HHHHHHHHHHTTCCTTCEEEEEE
T ss_pred EhhhhhccCCHH--HHHHHHHHHHHHcCCCCEEEEEE
Confidence 984322111100 01368999999999999988743
No 217
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.04 E-value=4.3e-10 Score=94.71 Aligned_cols=118 Identities=12% Similarity=0.084 Sum_probs=79.0
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCc---------cEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEE-EccHHHHHH
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASV---------EQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILH-VCDGSEYLK 136 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~---------~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~-~~D~~~~l~ 136 (299)
++..+|||||||+|..+..+++..+. .+|+++|+++.. ..++++++ .+|......
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~---------------~~~~~~~~~~~d~~~~~~ 85 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF---------------PLEGATFLCPADVTDPRT 85 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC---------------CCTTCEEECSCCTTSHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc---------------cCCCCeEEEeccCCCHHH
Confidence 45689999999999999999987433 689999999831 12467888 888654321
Q ss_pred -----h-cCCCCccEEEEcCCCCCCCCCCCCc--------HHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhh
Q 037807 137 -----T-VQSGTFDAIIIDAFDPIRPGHDLFE--------GPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHR 202 (299)
Q Consensus 137 -----~-~~~~~fDvIi~D~~~~~~~~~~l~t--------~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~ 202 (299)
+ .++++||+|+++........ .... ..+++.+.+.|+|||.|++..... .....+...++.
T Consensus 86 ~~~~~~~~~~~~fD~V~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~----~~~~~~~~~l~~ 160 (196)
T 2nyu_A 86 SQRILEVLPGRRADVILSDMAPNATGF-RDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAG----SQSRRLQRRLTE 160 (196)
T ss_dssp HHHHHHHSGGGCEEEEEECCCCCCCSC-HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCS----GGGHHHHHHHHH
T ss_pred HHHHHHhcCCCCCcEEEeCCCCCCCCC-cccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCC----ccHHHHHHHHHH
Confidence 1 12358999999863221100 0000 367889999999999999864222 223455666666
Q ss_pred hc
Q 037807 203 IF 204 (299)
Q Consensus 203 ~F 204 (299)
.|
T Consensus 161 ~f 162 (196)
T 2nyu_A 161 EF 162 (196)
T ss_dssp HE
T ss_pred Hh
Confidence 67
No 218
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.03 E-value=9.3e-10 Score=104.95 Aligned_cols=99 Identities=13% Similarity=0.153 Sum_probs=79.4
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.+..+|||+|||+|.++..+++.. .+|++||+++.+++.|++++..++ -. ++++.+|+.+++. .+||+|
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~~--~~V~gvD~s~~ai~~A~~n~~~ng----l~-v~~~~~d~~~~~~----~~fD~V 357 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKRG--FNVKGFDSNEFAIEMARRNVEINN----VD-AEFEVASDREVSV----KGFDTV 357 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHHT----CC-EEEEECCTTTCCC----TTCSEE
T ss_pred CCCCEEEEeeccchHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcC----Cc-EEEEECChHHcCc----cCCCEE
Confidence 456899999999999999998863 689999999999999999987652 23 9999999987643 389999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++|++... ...++.+.+. .|+|+|++.+.+
T Consensus 358 v~dPPr~g------~~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 358 IVDPPRAG------LHPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp EECCCTTC------SCHHHHHHHH-HHCCSEEEEEES
T ss_pred EEcCCccc------hHHHHHHHHH-hcCCCcEEEEEC
Confidence 99876421 1255777765 599999999854
No 219
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.02 E-value=7.3e-10 Score=106.39 Aligned_cols=116 Identities=16% Similarity=0.256 Sum_probs=86.7
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCC-ccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHAS-VEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDA 145 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDv 145 (299)
.+..+|||+|||+|+.+..+++..+ ..+|+++|+++.+++.+++++... .-++++++.+|+.++....++++||+
T Consensus 258 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~----g~~~v~~~~~D~~~~~~~~~~~~fD~ 333 (450)
T 2yxl_A 258 KPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRM----GIKIVKPLVKDARKAPEIIGEEVADK 333 (450)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHT----TCCSEEEECSCTTCCSSSSCSSCEEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHc----CCCcEEEEEcChhhcchhhccCCCCE
Confidence 3467999999999999999987533 368999999999999999988765 23479999999877543222368999
Q ss_pred EEEcCCCCC-CC---CCC---------C-----CcHHHHHHHHHhcCCCcEEEEecCCc
Q 037807 146 IIIDAFDPI-RP---GHD---------L-----FEGPFFELVAKALRPGGAMCIQAESL 186 (299)
Q Consensus 146 Ii~D~~~~~-~~---~~~---------l-----~t~ef~~~~~~~LkpgGvlv~~~~s~ 186 (299)
|++|++... +. .+. + ...++++.+.+.|||||.++..+.+.
T Consensus 334 Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 334 VLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSI 392 (450)
T ss_dssp EEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred EEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 999976521 10 000 0 01578999999999999999866443
No 220
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.02 E-value=9.5e-10 Score=98.97 Aligned_cols=108 Identities=13% Similarity=0.126 Sum_probs=75.4
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEEC-CHHHHHHHHhhchhhh---cCCC---CCCEEEEEccH----HHHHH
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEI-DTMLINVYKEYFPEIA---IGYE---DSRVILHVCDG----SEYLK 136 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEi-d~~vi~~a~~~~~~~~---~~~~---~~rv~v~~~D~----~~~l~ 136 (299)
..++|||||||+|.++..+++.. ..+|+++|+ |+.+++.++++...+. .+.. .++++++..|. .....
T Consensus 79 ~~~~vLDlG~G~G~~~~~~a~~~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 157 (281)
T 3bzb_A 79 AGKTVCELGAGAGLVSIVAFLAG-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQR 157 (281)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTT-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHH
T ss_pred CCCeEEEecccccHHHHHHHHcC-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHh
Confidence 56799999999999999888864 458999999 9999999999873210 0111 14788885553 22222
Q ss_pred hcCCCCccEEEE-cCCCCCCCCCCCCcHHHHHHHHHhcC---C--CcEEEE
Q 037807 137 TVQSGTFDAIII-DAFDPIRPGHDLFEGPFFELVAKALR---P--GGAMCI 181 (299)
Q Consensus 137 ~~~~~~fDvIi~-D~~~~~~~~~~l~t~ef~~~~~~~Lk---p--gGvlv~ 181 (299)
....++||+|++ |...... ....+++.+.+.|+ | ||++++
T Consensus 158 ~~~~~~fD~Ii~~dvl~~~~-----~~~~ll~~l~~~Lk~~~p~~gG~l~v 203 (281)
T 3bzb_A 158 CTGLQRFQVVLLADLLSFHQ-----AHDALLRSVKMLLALPANDPTAVALV 203 (281)
T ss_dssp HHSCSSBSEEEEESCCSCGG-----GHHHHHHHHHHHBCCTTTCTTCEEEE
T ss_pred hccCCCCCEEEEeCcccChH-----HHHHHHHHHHHHhcccCCCCCCEEEE
Confidence 112578999997 5433210 12678999999999 9 997665
No 221
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.01 E-value=3.8e-10 Score=104.40 Aligned_cols=128 Identities=16% Similarity=0.114 Sum_probs=91.3
Q ss_pred CCCeEEEEeccccHHHHHHHhcCC-----ccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCC
Q 037807 68 NPKKVLLIGGGDGGILREISRHAS-----VEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGT 142 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~-----~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~ 142 (299)
...+|||+|||+|+++..++++.. ..+++++|+|+.+++.|+.++... ..+++++.+|..... ..++
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~-----g~~~~i~~~D~l~~~---~~~~ 201 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQ-----RQKMTLLHQDGLANL---LVDP 201 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHH-----TCCCEEEESCTTSCC---CCCC
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhC-----CCCceEEECCCCCcc---ccCC
Confidence 457999999999999999887532 168999999999999999987654 126899999976532 2578
Q ss_pred ccEEEEcCCCCCCC------------CCCC--CcHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhhh
Q 037807 143 FDAIIIDAFDPIRP------------GHDL--FEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHRI 203 (299)
Q Consensus 143 fDvIi~D~~~~~~~------------~~~l--~t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~~ 203 (299)
||+|+++++-...+ .... +...|++.+.+.|+|||++++-..+.+........+.+.+.+.
T Consensus 202 fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~~ir~~l~~~ 276 (344)
T 2f8l_A 202 VDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKN 276 (344)
T ss_dssp EEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHHHHHHHHHHH
T ss_pred ccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHHHHHHHHHhC
Confidence 99999998732110 0011 1136899999999999998876644455444445555555544
No 222
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.01 E-value=6.6e-10 Score=101.93 Aligned_cols=104 Identities=13% Similarity=0.133 Sum_probs=80.0
Q ss_pred CeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEEEc
Q 037807 70 KKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAIIID 149 (299)
Q Consensus 70 ~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi~D 149 (299)
.+|||||||+|..+..+++..+..+++++|+ +.+++.+++.+...+. .++++++.+|..+. . ++.||+|++.
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~---~-~~~~D~v~~~ 240 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLA---GERVSLVGGDMLQE---V-PSNGDIYLLS 240 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHH---TTSEEEEESCTTTC---C-CSSCSEEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCC---CCcEEEecCCCCCC---C-CCCCCEEEEc
Confidence 8999999999999999997644568999999 9999999998765421 36899999998762 3 4679999985
Q ss_pred CCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 150 AFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 150 ~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
..-...+.. ....+++.+++.|+|||.+++..
T Consensus 241 ~vl~~~~~~--~~~~~l~~~~~~L~pgG~l~i~e 272 (334)
T 2ip2_A 241 RIIGDLDEA--ASLRLLGNCREAMAGDGRVVVIE 272 (334)
T ss_dssp SCGGGCCHH--HHHHHHHHHHHHSCTTCEEEEEE
T ss_pred hhccCCCHH--HHHHHHHHHHHhcCCCCEEEEEE
Confidence 432211110 01478999999999999988753
No 223
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.01 E-value=3e-10 Score=104.96 Aligned_cols=107 Identities=16% Similarity=0.191 Sum_probs=80.9
Q ss_pred CCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEEE
Q 037807 69 PKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAIII 148 (299)
Q Consensus 69 ~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi~ 148 (299)
+.+|||||||+|..+..+++..+..+++++|+ +.+++.+++++.... -.++++++.+|..+..... .+.||+|++
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~-~~~~D~v~~ 254 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHD---LGGRVEFFEKNLLDARNFE-GGAADVVML 254 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTT---CGGGEEEEECCTTCGGGGT-TCCEEEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcC---CCCceEEEeCCcccCcccC-CCCccEEEE
Confidence 78999999999999999998655578999999 899999999876531 1358999999987643112 467999998
Q ss_pred cCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 149 DAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 149 D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
...-...+.. ....+++.+++.|+|||.+++.
T Consensus 255 ~~vlh~~~~~--~~~~~l~~~~~~L~pgG~l~i~ 286 (352)
T 3mcz_A 255 NDCLHYFDAR--EAREVIGHAAGLVKPGGALLIL 286 (352)
T ss_dssp ESCGGGSCHH--HHHHHHHHHHHTEEEEEEEEEE
T ss_pred ecccccCCHH--HHHHHHHHHHHHcCCCCEEEEE
Confidence 4322211100 0157899999999999998874
No 224
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.00 E-value=2.9e-10 Score=107.39 Aligned_cols=121 Identities=20% Similarity=0.229 Sum_probs=86.6
Q ss_pred CCCCeEEEEeccccHHHHHHHhcC-CccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHA-SVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDA 145 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDv 145 (299)
+++.+|||+|||+|.++..++++. ...+|++||+|+.+++.| ++++++.+|..++.. .++||+
T Consensus 38 ~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a-------------~~~~~~~~D~~~~~~---~~~fD~ 101 (421)
T 2ih2_A 38 PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP-------------PWAEGILADFLLWEP---GEAFDL 101 (421)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC-------------TTEEEEESCGGGCCC---SSCEEE
T ss_pred CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC-------------CCCcEEeCChhhcCc---cCCCCE
Confidence 346799999999999999998752 346899999999998765 378999999877532 468999
Q ss_pred EEEcCCCCCCCCC-C----C--------------------CcHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHH
Q 037807 146 IIIDAFDPIRPGH-D----L--------------------FEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDC 200 (299)
Q Consensus 146 Ii~D~~~~~~~~~-~----l--------------------~t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l 200 (299)
|+++++....... + + ....|++.+.+.|+|||.+++-..+.++.......+.+.+
T Consensus 102 Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~lr~~l 181 (421)
T 2ih2_A 102 ILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFL 181 (421)
T ss_dssp EEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHHHHHHH
T ss_pred EEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCccHHHHHHHH
Confidence 9998765321110 0 0 1137899999999999998886655554433344455555
Q ss_pred hhh
Q 037807 201 HRI 203 (299)
Q Consensus 201 ~~~ 203 (299)
.+.
T Consensus 182 ~~~ 184 (421)
T 2ih2_A 182 ARE 184 (421)
T ss_dssp HHH
T ss_pred Hhc
Confidence 443
No 225
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.00 E-value=8.1e-10 Score=102.81 Aligned_cols=107 Identities=21% Similarity=0.256 Sum_probs=80.1
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
++..+|||||||+|..+..+++..+..+++++|+ +.+++.|++++...+ + .++++++.+|+.+. . +..||+|
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~--~-~~~v~~~~~d~~~~---~-~~~~D~v 252 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAG--L-ADRVTVAEGDFFKP---L-PVTADVV 252 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT--C-TTTEEEEECCTTSC---C-SCCEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcC--C-CCceEEEeCCCCCc---C-CCCCCEE
Confidence 3568999999999999999998654568999999 999999999876531 1 34899999998652 2 2359999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++...-...+.. ....+++.+++.|+|||.+++..
T Consensus 253 ~~~~vl~~~~~~--~~~~~l~~~~~~L~pgG~l~i~e 287 (374)
T 1qzz_A 253 LLSFVLLNWSDE--DALTILRGCVRALEPGGRLLVLD 287 (374)
T ss_dssp EEESCGGGSCHH--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEeccccCCCHH--HHHHHHHHHHHhcCCCcEEEEEe
Confidence 985432211100 01378999999999999887643
No 226
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.99 E-value=1.3e-10 Score=112.54 Aligned_cols=108 Identities=18% Similarity=0.139 Sum_probs=80.3
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAII 147 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi 147 (299)
+..+|||||||+|.++..+++++ ..+|++||+++ +++.|++.+...+ + .++++++.+|+.++- . .++||+|+
T Consensus 158 ~~~~VLDiGcGtG~la~~la~~~-~~~V~gvD~s~-~l~~A~~~~~~~g--l-~~~v~~~~~d~~~~~--~-~~~fD~Iv 229 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQAG-ARKIYAVEAST-MAQHAEVLVKSNN--L-TDRIVVIPGKVEEVS--L-PEQVDIII 229 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHHTT-CSEEEEEECHH-HHHHHHHHHHHTT--C-TTTEEEEESCTTTCC--C-SSCEEEEE
T ss_pred CCCEEEEecCcccHHHHHHHHcC-CCEEEEEEcHH-HHHHHHHHHHHcC--C-CCcEEEEECchhhCc--c-CCCeEEEE
Confidence 56799999999999999998864 56899999999 9999998876542 1 368999999987641 2 46899999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCC
Q 037807 148 IDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAES 185 (299)
Q Consensus 148 ~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s 185 (299)
++......... -..+.+..+++.|+|||+++...+.
T Consensus 230 s~~~~~~~~~e--~~~~~l~~~~~~LkpgG~li~~~~~ 265 (480)
T 3b3j_A 230 SEPMGYMLFNE--RMLESYLHAKKYLKPSGNMFPTIGD 265 (480)
T ss_dssp CCCCHHHHTCH--HHHHHHHHGGGGEEEEEEEESCEEE
T ss_pred EeCchHhcCcH--HHHHHHHHHHHhcCCCCEEEEEece
Confidence 86431100000 0145677788999999999865433
No 227
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.99 E-value=3.4e-09 Score=91.03 Aligned_cols=102 Identities=14% Similarity=0.087 Sum_probs=77.8
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHH--------------
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSE-------------- 133 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~-------------- 133 (299)
++++||++|+ |..+..+++.+ ..+|+.||.|++..+.+++++...+.+ ...+++++.+|+.+
T Consensus 30 ~a~~VLEiGt--GySTl~lA~~~-~g~VvtvE~d~~~~~~ar~~l~~~g~~-~~~~I~~~~gda~~~~~wg~p~~~~~~~ 105 (202)
T 3cvo_A 30 EAEVILEYGS--GGSTVVAAELP-GKHVTSVESDRAWARMMKAWLAANPPA-EGTEVNIVWTDIGPTGDWGHPVSDAKWR 105 (202)
T ss_dssp HCSEEEEESC--SHHHHHHHTST-TCEEEEEESCHHHHHHHHHHHHHSCCC-TTCEEEEEECCCSSBCGGGCBSSSTTGG
T ss_pred CCCEEEEECc--hHHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHcCCC-CCCceEEEEeCchhhhcccccccchhhh
Confidence 6789999998 47888888764 579999999999999999998764210 13589999999643
Q ss_pred ----HHHh---c-CCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 134 ----YLKT---V-QSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 134 ----~l~~---~-~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
+... . ..++||+|++|.... .+++..+.+.|+|||++++.
T Consensus 106 ~l~~~~~~i~~~~~~~~fDlIfIDg~k~---------~~~~~~~l~~l~~GG~Iv~D 153 (202)
T 3cvo_A 106 SYPDYPLAVWRTEGFRHPDVVLVDGRFR---------VGCALATAFSITRPVTLLFD 153 (202)
T ss_dssp GTTHHHHGGGGCTTCCCCSEEEECSSSH---------HHHHHHHHHHCSSCEEEEET
T ss_pred hHHHHhhhhhccccCCCCCEEEEeCCCc---------hhHHHHHHHhcCCCeEEEEe
Confidence 3321 1 136899999997432 46677788999999999873
No 228
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.99 E-value=1.2e-09 Score=102.39 Aligned_cols=146 Identities=14% Similarity=0.064 Sum_probs=96.0
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
++..+|||+|||+|.++.++++.....+|+++|+|+.+++.|++++...+. .++++++.+|+.+... +.++||+|
T Consensus 216 ~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl---~~~i~~~~~D~~~~~~--~~~~fD~I 290 (373)
T 3tm4_A 216 LDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGV---LDKIKFIQGDATQLSQ--YVDSVDFA 290 (373)
T ss_dssp CCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTC---GGGCEEEECCGGGGGG--TCSCEEEE
T ss_pred CCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCC---CCceEEEECChhhCCc--ccCCcCEE
Confidence 456889999999999999999875444899999999999999999875421 2589999999988643 25789999
Q ss_pred EEcCCCCCCCC--CCC--CcHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhhhcCCceeeeEEeecccCCcc
Q 037807 147 IIDAFDPIRPG--HDL--FEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHRIFKGSASYAWTTVPTYPSGV 222 (299)
Q Consensus 147 i~D~~~~~~~~--~~l--~t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~~F~~~v~~~~~~vP~~~~g~ 222 (299)
++|++...... ..+ ...++++.+++.| +|.+++-+. ..+.+.+.+... -|. . ....+.|.++.
T Consensus 291 i~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~----~~~~~~~~~~~~--G~~-~----~~~~~~~nG~l 357 (373)
T 3tm4_A 291 ISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT----EKKAIEEAIAEN--GFE-I----IHHRVIGHGGL 357 (373)
T ss_dssp EEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEES----CHHHHHHHHHHT--TEE-E----EEEEEEEETTE
T ss_pred EECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC----CHHHHHHHHHHc--CCE-E----EEEEEEEcCCE
Confidence 99987543211 111 0156778888888 343333221 233333333222 231 1 12345567777
Q ss_pred eeEEeccc
Q 037807 223 IGFMLCST 230 (299)
Q Consensus 223 w~~~~ask 230 (299)
+.-++-++
T Consensus 358 ~~~~~~~~ 365 (373)
T 3tm4_A 358 MVHLYVVK 365 (373)
T ss_dssp EEEEEEEE
T ss_pred EEEEEecc
Confidence 77776655
No 229
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.99 E-value=4.7e-10 Score=96.65 Aligned_cols=92 Identities=12% Similarity=0.124 Sum_probs=72.4
Q ss_pred CCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEEE
Q 037807 69 PKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAIII 148 (299)
Q Consensus 69 ~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi~ 148 (299)
+.+|||||||+|..+..+++. +++|+++.+++.+++. +++++.+|+.+.. .++++||+|++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~-----------~~~~~~~d~~~~~--~~~~~fD~v~~ 108 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR-----------GVFVLKGTAENLP--LKDESFDFALM 108 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT-----------TCEEEECBTTBCC--SCTTCEEEEEE
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc-----------CCEEEEcccccCC--CCCCCeeEEEE
Confidence 789999999999999988654 9999999999999875 5788888876532 22568999998
Q ss_pred cCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 149 DAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 149 D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
...-...+. ...+++.+.+.|+|||.+++..
T Consensus 109 ~~~l~~~~~----~~~~l~~~~~~L~pgG~l~i~~ 139 (219)
T 1vlm_A 109 VTTICFVDD----PERALKEAYRILKKGGYLIVGI 139 (219)
T ss_dssp ESCGGGSSC----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred cchHhhccC----HHHHHHHHHHHcCCCcEEEEEE
Confidence 643211111 2679999999999999998864
No 230
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.98 E-value=5.2e-10 Score=105.27 Aligned_cols=98 Identities=24% Similarity=0.291 Sum_probs=71.3
Q ss_pred CCCCeEEEEecc------ccHHHHHHHh-cCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHH--HHHh
Q 037807 67 PNPKKVLLIGGG------DGGILREISR-HASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSE--YLKT 137 (299)
Q Consensus 67 ~~~~~VL~IG~G------~G~~~~~l~~-~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~--~l~~ 137 (299)
.++.+||||||| +|+.+..+++ +.+..+|++||+++.+. . ..++++++++|+.+ ++..
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~------~-------~~~rI~fv~GDa~dlpf~~~ 281 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH------V-------DELRIRTIQGDQNDAEFLDR 281 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG------G-------CBTTEEEEECCTTCHHHHHH
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh------h-------cCCCcEEEEecccccchhhh
Confidence 467899999999 5555555554 44457999999999972 1 24789999999865 3311
Q ss_pred c--CCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 138 V--QSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 138 ~--~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
. ..++||+|++|.... .. -...+|+.++++|||||+|++.
T Consensus 282 l~~~d~sFDlVisdgsH~-~~----d~~~aL~el~rvLKPGGvlVi~ 323 (419)
T 3sso_A 282 IARRYGPFDIVIDDGSHI-NA----HVRTSFAALFPHVRPGGLYVIE 323 (419)
T ss_dssp HHHHHCCEEEEEECSCCC-HH----HHHHHHHHHGGGEEEEEEEEEE
T ss_pred hhcccCCccEEEECCccc-ch----hHHHHHHHHHHhcCCCeEEEEE
Confidence 1 137899999875421 10 0267899999999999999985
No 231
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.97 E-value=4.4e-10 Score=101.24 Aligned_cols=126 Identities=13% Similarity=0.089 Sum_probs=82.4
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEE--EccHHHHHHhcCCCCcc
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILH--VCDGSEYLKTVQSGTFD 144 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~--~~D~~~~l~~~~~~~fD 144 (299)
++..+|||||||+|+.+..+++. .+|++||+++ ++..+++.. ..... ...+++++ .+|+.++ ++++||
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~-m~~~a~~~~-~~~~~-~~~~v~~~~~~~D~~~l----~~~~fD 150 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT-LGTSGHEKP-RLVET-FGWNLITFKSKVDVTKM----EPFQAD 150 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC-CCCTTSCCC-CCCCC-TTGGGEEEECSCCGGGC----CCCCCS
T ss_pred CCCCEEEEeccCCCHHHHHHHHc---CCEEEEECch-hhhhhhhch-hhhhh-cCCCeEEEeccCcHhhC----CCCCcC
Confidence 35679999999999999999887 4799999999 533332211 00000 01278888 8898763 257899
Q ss_pred EEEEcCCCCCCCCCCC---CcHHHHHHHHHhcCCCc--EEEEecCCcccchHHHHHHHHHHhhhcC
Q 037807 145 AIIIDAFDPIRPGHDL---FEGPFFELVAKALRPGG--AMCIQAESLWFQQFSVQHLIDDCHRIFK 205 (299)
Q Consensus 145 vIi~D~~~~~~~~~~l---~t~ef~~~~~~~LkpgG--vlv~~~~s~~~~~~~~~~~~~~l~~~F~ 205 (299)
+|++|.. .......+ -+..+++.+.+.|+||| .|++..-++.. ......++.+++.|.
T Consensus 151 ~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~~~~--~~~~~~l~~l~~~f~ 213 (276)
T 2wa2_A 151 TVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLNPYS--CDVLEALMKMQARFG 213 (276)
T ss_dssp EEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESCCCS--HHHHHHHHHHHHHHC
T ss_pred EEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCCCCc--hhHHHHHHHHHHHcC
Confidence 9999876 22111000 01136888999999999 99986544322 223456677777783
No 232
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.97 E-value=1.1e-10 Score=105.04 Aligned_cols=114 Identities=13% Similarity=0.064 Sum_probs=73.7
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCC------------C--------------C
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGY------------E--------------D 121 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~------------~--------------~ 121 (299)
++.+|||||||+|.....+++.. ..+|++||+++.+++.|++++......+ . .
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSH-FEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGG-CSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccC-CCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 56899999999999554444433 3589999999999999998654210000 0 0
Q ss_pred CCEEEEEccHHHHHH----hcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 122 SRVILHVCDGSEYLK----TVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 122 ~rv~v~~~D~~~~l~----~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
..++++.+|+.+.+. ..++++||+|++...-.......---..+++.++++|||||.|++.
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~ 214 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLI 214 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 125677778766322 1124569999986432110000000167899999999999999874
No 233
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.96 E-value=5e-10 Score=102.52 Aligned_cols=107 Identities=18% Similarity=0.145 Sum_probs=79.8
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.+..+|||||||+|..+..+++..+..+++++|++ .+++.|++.+...+. .++++++.+|+.+. .. .+.||+|
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~--~~-~~~~D~v 236 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGV---ASRYHTIAGSAFEV--DY-GNDYDLV 236 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTC---GGGEEEEESCTTTS--CC-CSCEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCC---CcceEEEecccccC--CC-CCCCcEE
Confidence 45689999999999999999986445689999999 999999998765421 34799999998653 12 3459999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
++...-...+.. ....+++.+++.|+|||.+++.
T Consensus 237 ~~~~~l~~~~~~--~~~~~l~~~~~~L~pgG~l~i~ 270 (335)
T 2r3s_A 237 LLPNFLHHFDVA--TCEQLLRKIKTALAVEGKVIVF 270 (335)
T ss_dssp EEESCGGGSCHH--HHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEcchhccCCHH--HHHHHHHHHHHhCCCCcEEEEE
Confidence 984321111100 0157899999999999977764
No 234
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.96 E-value=1.4e-09 Score=95.34 Aligned_cols=116 Identities=14% Similarity=0.084 Sum_probs=76.5
Q ss_pred CcchhhHHHHHHhhcccCCCCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEE
Q 037807 48 EKDECAYQEMITHLPLCSIPNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILH 127 (299)
Q Consensus 48 ~~de~~Y~e~l~~~~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~ 127 (299)
++..+...+++..+.. .+..++|||||||+|.++..++++ +..+|++||+++.|++.+++..+ ++...
T Consensus 19 srg~~kL~~~L~~~~~--~~~g~~VLDiGcGtG~~t~~la~~-g~~~V~gvDis~~ml~~a~~~~~---------~~~~~ 86 (232)
T 3opn_A 19 SRGGLKLEKALKEFHL--EINGKTCLDIGSSTGGFTDVMLQN-GAKLVYALDVGTNQLAWKIRSDE---------RVVVM 86 (232)
T ss_dssp STTHHHHHHHHHHTTC--CCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSCCCCCHHHHTCT---------TEEEE
T ss_pred CCcHHHHHHHHHHcCC--CCCCCEEEEEccCCCHHHHHHHhc-CCCEEEEEcCCHHHHHHHHHhCc---------ccccc
Confidence 3333444556655433 235679999999999999999988 45689999999999999887533 33222
Q ss_pred EccHHHHHH--hcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 128 VCDGSEYLK--TVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 128 ~~D~~~~l~--~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
...-..++. ......||.+.+|..-.. ...+++.+++.|||||.+++.
T Consensus 87 ~~~~~~~~~~~~~~~~~~d~~~~D~v~~~-------l~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 87 EQFNFRNAVLADFEQGRPSFTSIDVSFIS-------LDLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp CSCCGGGCCGGGCCSCCCSEEEECCSSSC-------GGGTHHHHHHHSCTTCEEEEE
T ss_pred ccceEEEeCHhHcCcCCCCEEEEEEEhhh-------HHHHHHHHHHhccCCCEEEEE
Confidence 111111221 111224677777754321 166899999999999998874
No 235
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.96 E-value=2.5e-09 Score=99.28 Aligned_cols=106 Identities=20% Similarity=0.173 Sum_probs=79.8
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
++..+|||||||+|..+..+++..+..+++++|+ +.+++.+++++...+ . ..+++++.+|+.+.. ...+|+|
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~--~-~~~v~~~~~d~~~~~----~~~~D~v 260 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKG--V-ADRMRGIAVDIYKES----YPEADAV 260 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTT--C-TTTEEEEECCTTTSC----CCCCSEE
T ss_pred CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcC--C-CCCEEEEeCccccCC----CCCCCEE
Confidence 4578999999999999999998655568999999 999999999876531 1 357999999987641 2335999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
++...-...+.. ....+++.+++.|+|||.+++.
T Consensus 261 ~~~~vlh~~~d~--~~~~~l~~~~~~L~pgG~l~i~ 294 (359)
T 1x19_A 261 LFCRILYSANEQ--LSTIMCKKAFDAMRSGGRLLIL 294 (359)
T ss_dssp EEESCGGGSCHH--HHHHHHHHHHTTCCTTCEEEEE
T ss_pred EEechhccCCHH--HHHHHHHHHHHhcCCCCEEEEE
Confidence 985432211110 0267899999999999998664
No 236
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.95 E-value=6.8e-10 Score=102.90 Aligned_cols=107 Identities=28% Similarity=0.368 Sum_probs=79.8
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.+..+|||||||+|..+..+++..+..+++++|+ +.+++.|++++...+ . .++++++.+|+.+. . +..||+|
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~--~-~~~v~~~~~d~~~~---~-~~~~D~v 253 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEG--L-SDRVDVVEGDFFEP---L-PRKADAI 253 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTT--C-TTTEEEEECCTTSC---C-SSCEEEE
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcC--C-CCceEEEeCCCCCC---C-CCCccEE
Confidence 3568999999999999999998654568999999 999999999876531 1 34899999998653 2 3359999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++...-...+.. ....+++.+++.|+|||.+++..
T Consensus 254 ~~~~vl~~~~~~--~~~~~l~~~~~~L~pgG~l~i~e 288 (360)
T 1tw3_A 254 ILSFVLLNWPDH--DAVRILTRCAEALEPGGRILIHE 288 (360)
T ss_dssp EEESCGGGSCHH--HHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEcccccCCCHH--HHHHHHHHHHHhcCCCcEEEEEE
Confidence 985432111100 01468999999999999888753
No 237
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.93 E-value=1.9e-09 Score=109.10 Aligned_cols=111 Identities=13% Similarity=0.035 Sum_probs=80.9
Q ss_pred CCCeEEEEeccccHHHHHHHhcC-CccEEEEEECCHHHHHHHHhhchhhhc--CCCCCCEEEEEccHHHHHHhcCCCCcc
Q 037807 68 NPKKVLLIGGGDGGILREISRHA-SVEQIHICEIDTMLINVYKEYFPEIAI--GYEDSRVILHVCDGSEYLKTVQSGTFD 144 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~--~~~~~rv~v~~~D~~~~l~~~~~~~fD 144 (299)
++.+|||||||+|.++..+++.. +..+|++||+++.+++.|++.+..... ....++++++.+|+.++.. ..+.||
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~--~d~sFD 798 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDS--RLHDVD 798 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCT--TSCSCC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCc--ccCCee
Confidence 57899999999999999999875 446899999999999999986543210 1123589999999877433 257899
Q ss_pred EEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 145 AIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 145 vIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
+|++...-..-+.. ....+++.+.+.|+|| .+++..
T Consensus 799 lVV~~eVLeHL~dp--~l~~~L~eI~RvLKPG-~LIIST 834 (950)
T 3htx_A 799 IGTCLEVIEHMEED--QACEFGEKVLSLFHPK-LLIVST 834 (950)
T ss_dssp EEEEESCGGGSCHH--HHHHHHHHHHHTTCCS-EEEEEE
T ss_pred EEEEeCchhhCChH--HHHHHHHHHHHHcCCC-EEEEEe
Confidence 99984322111100 0135899999999999 666644
No 238
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.92 E-value=6.4e-10 Score=105.19 Aligned_cols=103 Identities=17% Similarity=0.113 Sum_probs=72.7
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
++..+|||||||+|.++..++++. .+|++||+++.+++.|++.-. ......+..+|+.. +... +++||+|
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~g--~~v~gvD~s~~~~~~a~~~~~------~~~~~~~~~~~~~~-l~~~-~~~fD~I 175 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEAG--VRHLGFEPSSGVAAKAREKGI------RVRTDFFEKATADD-VRRT-EGPANVI 175 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHTT--CEEEEECCCHHHHHHHHTTTC------CEECSCCSHHHHHH-HHHH-HCCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHcC--CcEEEECCCHHHHHHHHHcCC------CcceeeechhhHhh-cccC-CCCEEEE
Confidence 356799999999999999999874 489999999999999998611 00011112233333 2222 5789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++...-..-+. ...+++.+++.|+|||++++..
T Consensus 176 ~~~~vl~h~~d----~~~~l~~~~r~LkpgG~l~i~~ 208 (416)
T 4e2x_A 176 YAANTLCHIPY----VQSVLEGVDALLAPDGVFVFED 208 (416)
T ss_dssp EEESCGGGCTT----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECChHHhcCC----HHHHHHHHHHHcCCCeEEEEEe
Confidence 98543211111 2789999999999999999864
No 239
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.91 E-value=4.5e-10 Score=100.61 Aligned_cols=126 Identities=16% Similarity=0.092 Sum_probs=81.9
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEE--EccHHHHHHhcCCCCcc
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILH--VCDGSEYLKTVQSGTFD 144 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~--~~D~~~~l~~~~~~~fD 144 (299)
++..+|||||||+|+.+..++++ .+|++||+++ ++..+++. +..... ...++.++ .+|+.++ ++++||
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~-m~~~a~~~-~~~~~~-~~~~v~~~~~~~D~~~l----~~~~fD 142 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT-LGVGGHEV-PRITES-YGWNIVKFKSRVDIHTL----PVERTD 142 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC-CCCSSCCC-CCCCCB-TTGGGEEEECSCCTTTS----CCCCCS
T ss_pred CCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECch-hhhhhhhh-hhhhhc-cCCCeEEEecccCHhHC----CCCCCc
Confidence 35679999999999999999887 5799999999 43322211 100000 01268888 8898763 257899
Q ss_pred EEEEcCCCCCCCCCCC---CcHHHHHHHHHhcCCCc--EEEEecCCcccchHHHHHHHHHHhhhcC
Q 037807 145 AIIIDAFDPIRPGHDL---FEGPFFELVAKALRPGG--AMCIQAESLWFQQFSVQHLIDDCHRIFK 205 (299)
Q Consensus 145 vIi~D~~~~~~~~~~l---~t~ef~~~~~~~LkpgG--vlv~~~~s~~~~~~~~~~~~~~l~~~F~ 205 (299)
+|++|.. .......+ -+..+++.+.+.|+||| .|++..-++.. ..+...+..+++.|.
T Consensus 143 ~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~~~~--~~~~~~l~~l~~~f~ 205 (265)
T 2oxt_A 143 VIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLCPYS--VEVMERLSVMQRKWG 205 (265)
T ss_dssp EEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESCTTS--HHHHHHHHHHHHHHC
T ss_pred EEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCCCCC--hhHHHHHHHHHHHcC
Confidence 9999976 22111100 01137888999999999 99986533222 223456677777783
No 240
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.91 E-value=3.5e-09 Score=98.39 Aligned_cols=104 Identities=16% Similarity=0.157 Sum_probs=77.8
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAII 147 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi 147 (299)
..++|||||||+|..+..+++..+..++++.|+ |.|++.+++++... ..+|++++.+|.++ . +...+|+|+
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~----~~~rv~~~~gD~~~---~-~~~~~D~~~ 249 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQ----EEEQIDFQEGDFFK---D-PLPEADLYI 249 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC------CCSEEEEESCTTT---S-CCCCCSEEE
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhc----ccCceeeecCcccc---C-CCCCceEEE
Confidence 467999999999999999998655668888897 89999999987643 25799999999754 2 245689999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 148 IDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 148 ~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
+-..-...+.+ ....+++++++.|+|||.+++.
T Consensus 250 ~~~vlh~~~d~--~~~~iL~~~~~al~pgg~lli~ 282 (353)
T 4a6d_A 250 LARVLHDWADG--KCSHLLERIYHTCKPGGGILVI 282 (353)
T ss_dssp EESSGGGSCHH--HHHHHHHHHHHHCCTTCEEEEE
T ss_pred eeeecccCCHH--HHHHHHHHHHhhCCCCCEEEEE
Confidence 83322111110 0156899999999999988774
No 241
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.88 E-value=1.3e-08 Score=91.29 Aligned_cols=128 Identities=16% Similarity=0.176 Sum_probs=82.2
Q ss_pred CCCeEEEEeccc--cHHHHHHHh-cCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHH--hcC--C
Q 037807 68 NPKKVLLIGGGD--GGILREISR-HASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLK--TVQ--S 140 (299)
Q Consensus 68 ~~~~VL~IG~G~--G~~~~~l~~-~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~--~~~--~ 140 (299)
...+|||||||. ++...++++ ..+..+|++||.||.|++.||+.+... ...+++++.+|+.+.-. ..+ .
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~----~~~~~~~v~aD~~~~~~~l~~~~~~ 153 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLAST----PEGRTAYVEADMLDPASILDAPELR 153 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCC----SSSEEEEEECCTTCHHHHHTCHHHH
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccC----CCCcEEEEEecccChhhhhcccccc
Confidence 457999999997 445566554 334579999999999999999987632 13479999999987521 000 2
Q ss_pred CCcc-----EEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHH
Q 037807 141 GTFD-----AIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDC 200 (299)
Q Consensus 141 ~~fD-----vIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l 200 (299)
+.|| .|++...-+.-+... --...++.+.+.|+|||.|++...+.-..++....+.+..
T Consensus 154 ~~~D~~~p~av~~~avLH~l~d~~-~p~~~l~~l~~~L~PGG~Lvls~~~~d~~p~~~~~~~~~~ 217 (277)
T 3giw_A 154 DTLDLTRPVALTVIAIVHFVLDED-DAVGIVRRLLEPLPSGSYLAMSIGTAEFAPQEVGRVAREY 217 (277)
T ss_dssp TTCCTTSCCEEEEESCGGGSCGGG-CHHHHHHHHHTTSCTTCEEEEEEECCTTSHHHHHHHHHHH
T ss_pred cccCcCCcchHHhhhhHhcCCchh-hHHHHHHHHHHhCCCCcEEEEEeccCCCCHHHHHHHHHHH
Confidence 4465 466654433222110 0146899999999999999986533222333334444433
No 242
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.88 E-value=1.2e-09 Score=99.86 Aligned_cols=124 Identities=15% Similarity=0.073 Sum_probs=81.1
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEEC----CHHHHHHHHhhchhhhcCCCCCCEEEEEc-cHHHHHHhcCCC
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEI----DTMLINVYKEYFPEIAIGYEDSRVILHVC-DGSEYLKTVQSG 141 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEi----d~~vi~~a~~~~~~~~~~~~~~rv~v~~~-D~~~~l~~~~~~ 141 (299)
++..+|||||||+|+.+..+++. .+|++||+ ++.+++..+ . .....++++++.+ |+..+ +.+
T Consensus 81 ~~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~~--~----~~~~~~~v~~~~~~D~~~l----~~~ 147 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPIP--M----STYGWNLVRLQSGVDVFFI----PPE 147 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCCC--C----CSTTGGGEEEECSCCTTTS----CCC
T ss_pred CCCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHHH--h----hhcCCCCeEEEeccccccC----CcC
Confidence 34579999999999999999887 46999999 454332110 0 0112357999998 87653 256
Q ss_pred CccEEEEcCCCCCCCC--CCCCcHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhhhcC
Q 037807 142 TFDAIIIDAFDPIRPG--HDLFEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHRIFK 205 (299)
Q Consensus 142 ~fDvIi~D~~~~~~~~--~~l~t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~~F~ 205 (299)
+||+|++|.....+.. ...-+...+..+.+.|+|||.|++....+. ......++..++..|.
T Consensus 148 ~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~~--~~~~~~~l~~l~~~f~ 211 (305)
T 2p41_A 148 RCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNPY--MSSVIEKMEALQRKHG 211 (305)
T ss_dssp CCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCCC--SHHHHHHHHHHHHHHC
T ss_pred CCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCCC--CchHHHHHHHHHHHcC
Confidence 8999999875431110 000011467888999999999998653332 1234566677777774
No 243
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.86 E-value=6.5e-09 Score=102.57 Aligned_cols=76 Identities=22% Similarity=0.222 Sum_probs=64.6
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
..+.||||||||+|.++..+++.. .+|++||+++.+++.|+.+.... ...+++++++|+.+......+++||+|
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~g--a~V~giD~~~~~i~~a~~~a~~~----~~~~~~~~~~~~~~~~~~~~~~~fD~v 138 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASKG--ATIVGIDFQQENINVCRALAEEN----PDFAAEFRVGRIEEVIAALEEGEFDLA 138 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHTS----TTSEEEEEECCHHHHHHHCCTTSCSEE
T ss_pred CCCCeEEEECCCCcHHHHHHHhCC--CEEEEECCCHHHHHHHHHHHHhc----CCCceEEEECCHHHHhhhccCCCccEE
Confidence 467899999999999999999884 58999999999999999987643 124799999999998765446789999
Q ss_pred EE
Q 037807 147 II 148 (299)
Q Consensus 147 i~ 148 (299)
++
T Consensus 139 ~~ 140 (569)
T 4azs_A 139 IG 140 (569)
T ss_dssp EE
T ss_pred EE
Confidence 98
No 244
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.85 E-value=4.1e-09 Score=93.62 Aligned_cols=113 Identities=16% Similarity=0.172 Sum_probs=83.7
Q ss_pred HHHHHHhhcccCCCCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHH
Q 037807 54 YQEMITHLPLCSIPNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSE 133 (299)
Q Consensus 54 Y~e~l~~~~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~ 133 (299)
|...+..+ +.|.+|||||||.|-++..+....+..+++++|+|+.+++.+++++..+ ..+.++...|...
T Consensus 123 Y~~i~~~i-----~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~-----g~~~~~~v~D~~~ 192 (281)
T 3lcv_B 123 YRELFRHL-----PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRL-----NVPHRTNVADLLE 192 (281)
T ss_dssp HHHHGGGS-----CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHT-----TCCEEEEECCTTT
T ss_pred HHHHHhcc-----CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhc-----CCCceEEEeeecc
Confidence 55554433 4588999999999999999887766789999999999999999998765 3568888888543
Q ss_pred HHHhcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 134 YLKTVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 134 ~l~~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
..+.++||+|++...-|.-.... ....| .+.+.|+++|++|..
T Consensus 193 ---~~p~~~~DvaL~lkti~~Le~q~--kg~g~-~ll~aL~~~~vvVSf 235 (281)
T 3lcv_B 193 ---DRLDEPADVTLLLKTLPCLETQQ--RGSGW-EVIDIVNSPNIVVTF 235 (281)
T ss_dssp ---SCCCSCCSEEEETTCHHHHHHHS--TTHHH-HHHHHSSCSEEEEEE
T ss_pred ---cCCCCCcchHHHHHHHHHhhhhh--hHHHH-HHHHHhCCCCEEEec
Confidence 23478899999854433110000 02345 789999999999864
No 245
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.83 E-value=1e-08 Score=97.01 Aligned_cols=115 Identities=18% Similarity=0.097 Sum_probs=79.1
Q ss_pred CCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEEE
Q 037807 69 PKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAIII 148 (299)
Q Consensus 69 ~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi~ 148 (299)
..+|||+|||+|..+..+++.. .+|++||+|+.+++.|++++.....+. .+++++.+|+.+++.....++||+|++
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g--~~V~~VD~s~~~l~~Ar~N~~~~~~gl--~~i~~i~~Da~~~L~~~~~~~fDvV~l 169 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKA--SQGIYIERNDETAVAARHNIPLLLNEG--KDVNILTGDFKEYLPLIKTFHPDYIYV 169 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHHSCTT--CEEEEEESCGGGSHHHHHHHCCSEEEE
T ss_pred CCEEEEeCCCchHHHHHHHhcC--CEEEEEECCHHHHHHHHHhHHHhccCC--CcEEEEECcHHHhhhhccCCCceEEEE
Confidence 6899999999999999988774 589999999999999999987541111 589999999998876422358999999
Q ss_pred cCCCCCCCCCCCC-----cHHHHHHHHH-hcCCCcEEEEecCCcccc
Q 037807 149 DAFDPIRPGHDLF-----EGPFFELVAK-ALRPGGAMCIQAESLWFQ 189 (299)
Q Consensus 149 D~~~~~~~~~~l~-----t~ef~~~~~~-~LkpgGvlv~~~~s~~~~ 189 (299)
|++...+.....+ ++.+ ..+.+ .+.....+++.. +|..+
T Consensus 170 DPPrr~~~~grv~~led~~P~l-~~~~~~l~~~~~~~~vK~-sP~ld 214 (410)
T 3ll7_A 170 DPARRSGADKRVYAIADCEPDL-IPLATELLPFCSSILAKL-SPMID 214 (410)
T ss_dssp CCEEC-----CCCCGGGEESCH-HHHHHHHGGGSSEEEEEE-CTTSC
T ss_pred CCCCcCCCCceEEehhhcCCCH-HHHHHHHHhhCCcEEEEc-CCCCC
Confidence 9876543222222 2333 33344 344445555555 45444
No 246
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.82 E-value=2.4e-08 Score=91.33 Aligned_cols=115 Identities=12% Similarity=0.011 Sum_probs=81.8
Q ss_pred CCCCeEEEEeccccHHHHHHHhc-CCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcC-CCCcc
Q 037807 67 PNPKKVLLIGGGDGGILREISRH-ASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQ-SGTFD 144 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~-~~~fD 144 (299)
.+..+|||+|||.|+.+..+++. .+..+|+++|+++.+++.+++++...+ -.+++++.+|+.++..... ..+||
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g----~~~v~~~~~D~~~~~~~~~~~~~fD 176 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAG----VSCCELAEEDFLAVSPSDPRYHEVH 176 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEECCGGGSCTTCGGGTTEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC----CCeEEEEeCChHhcCccccccCCCC
Confidence 34679999999999999999874 345789999999999999999987652 2579999999987643211 15799
Q ss_pred EEEEcCCCCC-CC-----CC---------CC-----CcHHHHHHHHHhcCCCcEEEEecCCc
Q 037807 145 AIIIDAFDPI-RP-----GH---------DL-----FEGPFFELVAKALRPGGAMCIQAESL 186 (299)
Q Consensus 145 vIi~D~~~~~-~~-----~~---------~l-----~t~ef~~~~~~~LkpgGvlv~~~~s~ 186 (299)
.|++|++... +. .. .+ ...++++.+.+.|+ ||.++..+.+.
T Consensus 177 ~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~ 237 (309)
T 2b9e_A 177 YILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSL 237 (309)
T ss_dssp EEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCC
T ss_pred EEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCC
Confidence 9999986521 11 10 00 01245666666676 89888765443
No 247
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.82 E-value=5.5e-09 Score=96.62 Aligned_cols=104 Identities=14% Similarity=0.127 Sum_probs=73.8
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
++..+|||||||+|..+..+++..+..+++++|+ +.++. ++...... ..++++++.+|+. ... + .||+|
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~---~~~~v~~~~~d~~---~~~-p-~~D~v 251 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPD---VAGRWKVVEGDFL---REV-P-HADVH 251 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGG---GTTSEEEEECCTT---TCC-C-CCSEE
T ss_pred cCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccC---CCCCeEEEecCCC---CCC-C-CCcEE
Confidence 4578999999999999999998655668999999 55555 44333211 1468999999986 223 3 89999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++...-...+.. -...+++++++.|||||.+++..
T Consensus 252 ~~~~vlh~~~d~--~~~~~L~~~~~~LkpgG~l~i~e 286 (348)
T 3lst_A 252 VLKRILHNWGDE--DSVRILTNCRRVMPAHGRVLVID 286 (348)
T ss_dssp EEESCGGGSCHH--HHHHHHHHHHHTCCTTCEEEEEE
T ss_pred EEehhccCCCHH--HHHHHHHHHHHhcCCCCEEEEEE
Confidence 985432211100 01478999999999999998743
No 248
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.82 E-value=1e-08 Score=92.82 Aligned_cols=127 Identities=15% Similarity=0.230 Sum_probs=79.6
Q ss_pred hhHHHHHHhh--cccCCCCCCeEEEEec------cccHHHHHHHh-cCCccEEEEEECCHHHHHHHHhhchhhhcCCCCC
Q 037807 52 CAYQEMITHL--PLCSIPNPKKVLLIGG------GDGGILREISR-HASVEQIHICEIDTMLINVYKEYFPEIAIGYEDS 122 (299)
Q Consensus 52 ~~Y~e~l~~~--~l~~~~~~~~VL~IG~------G~G~~~~~l~~-~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~ 122 (299)
..|.++...+ .....++..+|||||| |.|. ..+++ .+...+|++||+++. + +
T Consensus 45 ~~y~~l~~~l~~~~l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v---------~ 105 (290)
T 2xyq_A 45 AKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------V---------S 105 (290)
T ss_dssp HHHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------B---------C
T ss_pred HHHHHHHHHHHHhhcCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------C---------C
Confidence 3466665443 1122345679999999 4476 33344 333468999999998 1 2
Q ss_pred CEEE-EEccHHHHHHhcCCCCccEEEEcCCCCCC----CC---CCCCcHHHHHHHHHhcCCCcEEEEecCCcccchHHHH
Q 037807 123 RVIL-HVCDGSEYLKTVQSGTFDAIIIDAFDPIR----PG---HDLFEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQ 194 (299)
Q Consensus 123 rv~v-~~~D~~~~l~~~~~~~fDvIi~D~~~~~~----~~---~~l~t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~ 194 (299)
++++ +.+|+.+.. . .++||+|++|...+.. .. ..-...++++.+.+.|||||.|++..... ....
T Consensus 106 ~v~~~i~gD~~~~~--~-~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~----~~~~ 178 (290)
T 2xyq_A 106 DADSTLIGDCATVH--T-ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH----SWNA 178 (290)
T ss_dssp SSSEEEESCGGGCC--C-SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS----SCCH
T ss_pred CCEEEEECccccCC--c-cCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEecc----CCHH
Confidence 5778 999987642 1 3689999998653321 00 01112478899999999999999854211 1123
Q ss_pred HHHHHHhhh-c
Q 037807 195 HLIDDCHRI-F 204 (299)
Q Consensus 195 ~~~~~l~~~-F 204 (299)
.+.+.+++. |
T Consensus 179 ~l~~~l~~~GF 189 (290)
T 2xyq_A 179 DLYKLMGHFSW 189 (290)
T ss_dssp HHHHHHTTEEE
T ss_pred HHHHHHHHcCC
Confidence 555666665 6
No 249
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.82 E-value=1.6e-08 Score=91.21 Aligned_cols=78 Identities=19% Similarity=0.241 Sum_probs=62.7
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.+..+|||||||+|.++..+++.. .+|++||+|+.+++.+++.+...+ ..++++++.+|+.++- -..||+|
T Consensus 27 ~~~~~VLDiG~G~G~lt~~L~~~~--~~v~~vD~~~~~~~~a~~~~~~~~---~~~~v~~~~~D~~~~~----~~~fD~v 97 (285)
T 1zq9_A 27 RPTDVVLEVGPGTGNMTVKLLEKA--KKVVACELDPRLVAELHKRVQGTP---VASKLQVLVGDVLKTD----LPFFDTC 97 (285)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTST---TGGGEEEEESCTTTSC----CCCCSEE
T ss_pred CCCCEEEEEcCcccHHHHHHHhhC--CEEEEEECCHHHHHHHHHHHHhcC---CCCceEEEEcceeccc----chhhcEE
Confidence 356799999999999999999874 589999999999999999875321 1258999999987641 3479999
Q ss_pred EEcCCCC
Q 037807 147 IIDAFDP 153 (299)
Q Consensus 147 i~D~~~~ 153 (299)
+++.+..
T Consensus 98 v~nlpy~ 104 (285)
T 1zq9_A 98 VANLPYQ 104 (285)
T ss_dssp EEECCGG
T ss_pred EEecCcc
Confidence 9987543
No 250
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.82 E-value=1.1e-08 Score=96.34 Aligned_cols=110 Identities=13% Similarity=0.077 Sum_probs=81.6
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCc--------------------------------------cEEEEEECCHHHHHHHH
Q 037807 68 NPKKVLLIGGGDGGILREISRHASV--------------------------------------EQIHICEIDTMLINVYK 109 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~--------------------------------------~~v~~VEid~~vi~~a~ 109 (299)
....|||.+||+|+++.+++..... .+|+++|+|+.+++.|+
T Consensus 194 ~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar 273 (384)
T 3ldg_A 194 PDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIAR 273 (384)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHH
Confidence 4578999999999999998753211 35999999999999999
Q ss_pred hhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCC--CcEEEEec
Q 037807 110 EYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRP--GGAMCIQA 183 (299)
Q Consensus 110 ~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~Lkp--gGvlv~~~ 183 (299)
+++...+ . ..+++++.+|+.++.. ..+||+|++|++........--..++|+.+.+.|++ ||.+.+-+
T Consensus 274 ~Na~~~g--l-~~~I~~~~~D~~~l~~---~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 343 (384)
T 3ldg_A 274 KNAREVG--L-EDVVKLKQMRLQDFKT---NKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILT 343 (384)
T ss_dssp HHHHHTT--C-TTTEEEEECCGGGCCC---CCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEE
T ss_pred HHHHHcC--C-CCceEEEECChHHCCc---cCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEE
Confidence 9987652 1 3479999999987643 468999999987653322111125688888888877 88776644
No 251
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.81 E-value=6e-09 Score=96.46 Aligned_cols=99 Identities=11% Similarity=0.101 Sum_probs=73.8
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
++..+|||||||+|..+..+++..+..+++++|+ +.+++.+++. ++++++.+|+.+ .. + .||+|
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----------~~v~~~~~d~~~---~~-p-~~D~v 250 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS----------NNLTYVGGDMFT---SI-P-NADAV 250 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB----------TTEEEEECCTTT---CC-C-CCSEE
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC----------CCcEEEeccccC---CC-C-CccEE
Confidence 3568999999999999999997644568999999 9999877652 359999999865 22 2 39999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCC---CcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRP---GGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~Lkp---gGvlv~~~ 183 (299)
++...-...+.. -...+++.+++.|+| ||.+++..
T Consensus 251 ~~~~~lh~~~d~--~~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 251 LLKYILHNWTDK--DCLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp EEESCGGGSCHH--HHHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred EeehhhccCCHH--HHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 985432211110 013789999999999 99887753
No 252
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.80 E-value=1.4e-08 Score=91.05 Aligned_cols=96 Identities=18% Similarity=0.104 Sum_probs=70.8
Q ss_pred eEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEEEcC
Q 037807 71 KVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAIIIDA 150 (299)
Q Consensus 71 ~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi~D~ 150 (299)
+|||||||+|.++..+++.. .+|++||+|+.+++.+++.++ ..+++++.+|+.++-... ...+|.|+.+.
T Consensus 49 ~VLEIG~G~G~lt~~L~~~~--~~V~avEid~~~~~~l~~~~~-------~~~v~vi~~D~l~~~~~~-~~~~~~iv~Nl 118 (271)
T 3fut_A 49 PVFEVGPGLGALTRALLEAG--AEVTAIEKDLRLRPVLEETLS-------GLPVRLVFQDALLYPWEE-VPQGSLLVANL 118 (271)
T ss_dssp CEEEECCTTSHHHHHHHHTT--CCEEEEESCGGGHHHHHHHTT-------TSSEEEEESCGGGSCGGG-SCTTEEEEEEE
T ss_pred eEEEEeCchHHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcC-------CCCEEEEECChhhCChhh-ccCccEEEecC
Confidence 99999999999999999874 689999999999999999875 358999999998763221 23689999988
Q ss_pred CCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 151 FDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 151 ~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
+.... +.-+++.+....-..+++++|
T Consensus 119 Py~is------s~il~~ll~~~~~~~~~lm~Q 144 (271)
T 3fut_A 119 PYHIA------TPLVTRLLKTGRFARLVFLVQ 144 (271)
T ss_dssp CSSCC------HHHHHHHHHHCCEEEEEEEEE
T ss_pred ccccc------HHHHHHHhcCCCCCEEEEEee
Confidence 66533 233333333311135666665
No 253
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.80 E-value=1.2e-08 Score=92.66 Aligned_cols=77 Identities=18% Similarity=0.177 Sum_probs=63.7
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.+..+|||||||+|.++..+++.. .+|++||+|+.+++.+++.+.. .++++++.+|+.++-. ++..||+|
T Consensus 49 ~~~~~VLEIG~G~G~lT~~La~~~--~~V~aVEid~~li~~a~~~~~~------~~~v~vi~gD~l~~~~--~~~~fD~I 118 (295)
T 3gru_A 49 TKDDVVLEIGLGKGILTEELAKNA--KKVYVIEIDKSLEPYANKLKEL------YNNIEIIWGDALKVDL--NKLDFNKV 118 (295)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCGGGHHHHHHHHHH------CSSEEEEESCTTTSCG--GGSCCSEE
T ss_pred CCcCEEEEECCCchHHHHHHHhcC--CEEEEEECCHHHHHHHHHHhcc------CCCeEEEECchhhCCc--ccCCccEE
Confidence 356799999999999999999873 6899999999999999998762 3689999999987532 13579999
Q ss_pred EEcCCCC
Q 037807 147 IIDAFDP 153 (299)
Q Consensus 147 i~D~~~~ 153 (299)
+.+.+..
T Consensus 119 v~NlPy~ 125 (295)
T 3gru_A 119 VANLPYQ 125 (295)
T ss_dssp EEECCGG
T ss_pred EEeCccc
Confidence 9886543
No 254
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.79 E-value=2.3e-09 Score=96.38 Aligned_cols=112 Identities=16% Similarity=0.163 Sum_probs=74.3
Q ss_pred CCCeEEEEeccccH----HHHHHHhc-CC---ccEEEEEECCHHHHHHHHhhchhh-h----------------cCC-C-
Q 037807 68 NPKKVLLIGGGDGG----ILREISRH-AS---VEQIHICEIDTMLINVYKEYFPEI-A----------------IGY-E- 120 (299)
Q Consensus 68 ~~~~VL~IG~G~G~----~~~~l~~~-~~---~~~v~~VEid~~vi~~a~~~~~~~-~----------------~~~-~- 120 (299)
++.+||++|||+|. ++..+++. +. ..+|+++|+|+.+++.|++..-.. . ... +
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 55555554 31 248999999999999999864110 0 000 0
Q ss_pred --------CCCEEEEEccHHHHHHhcC-CCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 121 --------DSRVILHVCDGSEYLKTVQ-SGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 121 --------~~rv~v~~~D~~~~l~~~~-~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
..++++..+|..+. ..+ .++||+|++-..-..-.+. ....+++.+++.|+|||.|++-.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~--~~~~~~~fDlI~crnvliyf~~~--~~~~vl~~~~~~L~pgG~L~lg~ 252 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEK--QYNVPGPFDAIFCRNVMIYFDKT--TQEDILRRFVPLLKPDGLLFAGH 252 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCS--SCCCCCCEEEEEECSSGGGSCHH--HHHHHHHHHGGGEEEEEEEEECT
T ss_pred ceeechhhcccCeEEecccCCC--CCCcCCCeeEEEECCchHhCCHH--HHHHHHHHHHHHhCCCcEEEEEe
Confidence 13689999998652 111 3689999993211000000 02578999999999999999843
No 255
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.78 E-value=4.7e-09 Score=97.97 Aligned_cols=98 Identities=21% Similarity=0.138 Sum_probs=74.0
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
++..+|||||||+|..+..+++..+..+++++|+ +.+++.+++ .++++++.+|+.+ .. +. ||+|
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~d~~~---~~-~~-~D~v 271 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP----------LSGIEHVGGDMFA---SV-PQ-GDAM 271 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----------CTTEEEEECCTTT---CC-CC-EEEE
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh----------cCCCEEEeCCccc---CC-CC-CCEE
Confidence 4568999999999999999998655568899999 999887664 2479999999876 22 23 9999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
++...-...+.. -...+++.+++.|+|||.+++.
T Consensus 272 ~~~~~lh~~~d~--~~~~~l~~~~~~L~pgG~l~i~ 305 (372)
T 1fp1_D 272 ILKAVCHNWSDE--KCIEFLSNCHKALSPNGKVIIV 305 (372)
T ss_dssp EEESSGGGSCHH--HHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEecccccCCHH--HHHHHHHHHHHhcCCCCEEEEE
Confidence 985432211110 0137999999999999998875
No 256
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.77 E-value=3.5e-08 Score=89.86 Aligned_cols=91 Identities=26% Similarity=0.285 Sum_probs=70.7
Q ss_pred hHHHHHHhhcccCCCCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHH
Q 037807 53 AYQEMITHLPLCSIPNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGS 132 (299)
Q Consensus 53 ~Y~e~l~~~~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~ 132 (299)
.+.+++..+.. .+..+|||+|||+|+.+.++++..+..+|++||+|+.+++.|++++... . .+++++.+|+.
T Consensus 14 Ll~e~l~~L~~---~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~----g-~~v~~v~~d~~ 85 (301)
T 1m6y_A 14 MVREVIEFLKP---EDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEF----S-DRVSLFKVSYR 85 (301)
T ss_dssp THHHHHHHHCC---CTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGG----T-TTEEEEECCGG
T ss_pred HHHHHHHhcCC---CCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhc----C-CcEEEEECCHH
Confidence 45666655432 3567999999999999999998744578999999999999999998754 2 68999999987
Q ss_pred HHH---HhcCCCCccEEEEcCC
Q 037807 133 EYL---KTVQSGTFDAIIIDAF 151 (299)
Q Consensus 133 ~~l---~~~~~~~fDvIi~D~~ 151 (299)
++. .+....+||.|++|+.
T Consensus 86 ~l~~~l~~~g~~~~D~Vl~D~g 107 (301)
T 1m6y_A 86 EADFLLKTLGIEKVDGILMDLG 107 (301)
T ss_dssp GHHHHHHHTTCSCEEEEEEECS
T ss_pred HHHHHHHhcCCCCCCEEEEcCc
Confidence 653 2221258999999874
No 257
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.77 E-value=7.7e-09 Score=92.16 Aligned_cols=81 Identities=16% Similarity=0.088 Sum_probs=65.4
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCH-------HHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCC
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDT-------MLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQS 140 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~-------~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~ 140 (299)
...+|||+|||+|..+..+++.. .+|+++|+++ .+++.|+++....+. ..+++++.+|+.+++...++
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~g--~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~---~~ri~~~~~d~~~~l~~~~~ 157 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASLG--LTVTAFEQHPAVACLLSDGIRRALLNPETQDT---AARINLHFGNAAEQMPALVK 157 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHTT--CCEEEEECCHHHHHHHHHHHHHHHHSHHHHHH---HTTEEEEESCHHHHHHHHHH
T ss_pred CcCeEEEeeCccCHHHHHHHHhC--CEEEEEECChhhhHHHHHHHHHHHhHHHhhCC---ccCeEEEECCHHHHHHhhhc
Confidence 45789999999999999999863 5899999999 999999887654421 24699999999998764423
Q ss_pred --CCccEEEEcCCCC
Q 037807 141 --GTFDAIIIDAFDP 153 (299)
Q Consensus 141 --~~fDvIi~D~~~~ 153 (299)
++||+|++|+..+
T Consensus 158 ~~~~fD~V~~dP~~~ 172 (258)
T 2r6z_A 158 TQGKPDIVYLDPMYP 172 (258)
T ss_dssp HHCCCSEEEECCCC-
T ss_pred cCCCccEEEECCCCC
Confidence 6899999997654
No 258
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.77 E-value=5.1e-09 Score=98.59 Aligned_cols=112 Identities=17% Similarity=0.132 Sum_probs=80.7
Q ss_pred CCCeEEEEeccccHHHHHHHhcCC--------------------------------------ccEEEEEECCHHHHHHHH
Q 037807 68 NPKKVLLIGGGDGGILREISRHAS--------------------------------------VEQIHICEIDTMLINVYK 109 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~--------------------------------------~~~v~~VEid~~vi~~a~ 109 (299)
...+|||+|||+|+++.+++.... ..+|+++|+|+.+++.|+
T Consensus 195 ~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar 274 (385)
T 3ldu_A 195 AGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIAR 274 (385)
T ss_dssp TTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHH
Confidence 457899999999999999876411 146999999999999999
Q ss_pred hhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCC--CcEEEEecCC
Q 037807 110 EYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRP--GGAMCIQAES 185 (299)
Q Consensus 110 ~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~Lkp--gGvlv~~~~s 185 (299)
+++...+. ..++++..+|+.++.. +++||+|++|++........--..++|+.+.+.|++ ||.+.+-+++
T Consensus 275 ~Na~~~gl---~~~i~~~~~D~~~l~~---~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~ 346 (385)
T 3ldu_A 275 ENAEIAGV---DEYIEFNVGDATQFKS---EDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITSY 346 (385)
T ss_dssp HHHHHHTC---GGGEEEEECCGGGCCC---SCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEESC
T ss_pred HHHHHcCC---CCceEEEECChhhcCc---CCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEECC
Confidence 99876521 2479999999887643 468999999987542111000124678888777776 7766654433
No 259
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.76 E-value=7.9e-09 Score=96.50 Aligned_cols=99 Identities=17% Similarity=0.076 Sum_probs=73.3
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
+...+|||||||+|..+..+++..+..+++++|+ +.+++.+++ .++++++.+|+.+. . +.. |+|
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~d~~~~---~-p~~-D~v 265 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA----------FSGVEHLGGDMFDG---V-PKG-DAI 265 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----------CTTEEEEECCTTTC---C-CCC-SEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh----------cCCCEEEecCCCCC---C-CCC-CEE
Confidence 3468999999999999999998555568999999 988876653 36899999998752 2 233 999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++...-+..+.. -...+++++++.|+|||.+++..
T Consensus 266 ~~~~vlh~~~~~--~~~~~l~~~~~~L~pgG~l~i~e 300 (368)
T 3reo_A 266 FIKWICHDWSDE--HCLKLLKNCYAALPDHGKVIVAE 300 (368)
T ss_dssp EEESCGGGBCHH--HHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEechhhcCCHH--HHHHHHHHHHHHcCCCCEEEEEE
Confidence 985432211100 01468999999999999888753
No 260
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.76 E-value=6.9e-09 Score=97.94 Aligned_cols=111 Identities=11% Similarity=0.075 Sum_probs=79.6
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCC--------------------------------------ccEEEEEECCHHHHHHH
Q 037807 67 PNPKKVLLIGGGDGGILREISRHAS--------------------------------------VEQIHICEIDTMLINVY 108 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~--------------------------------------~~~v~~VEid~~vi~~a 108 (299)
.....|||.+||+|+++.+++.... ..+|+++|+|+.+++.|
T Consensus 200 ~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~A 279 (393)
T 3k0b_A 200 HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIA 279 (393)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHH
Confidence 3457899999999999999876321 13599999999999999
Q ss_pred HhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCC--CcEEEEec
Q 037807 109 KEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRP--GGAMCIQA 183 (299)
Q Consensus 109 ~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~Lkp--gGvlv~~~ 183 (299)
++++...+ + ..+++++.+|+.++.. .++||+|++|++........--..++|+.+.+.|++ ||.+.+-+
T Consensus 280 r~Na~~~g--l-~~~I~~~~~D~~~~~~---~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 350 (393)
T 3k0b_A 280 KQNAVEAG--L-GDLITFRQLQVADFQT---EDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLT 350 (393)
T ss_dssp HHHHHHTT--C-TTCSEEEECCGGGCCC---CCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEE
T ss_pred HHHHHHcC--C-CCceEEEECChHhCCC---CCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 99987642 1 3479999999987543 468999999987542211000124577777777766 88776644
No 261
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=98.74 E-value=4.7e-08 Score=88.81 Aligned_cols=146 Identities=16% Similarity=0.180 Sum_probs=91.5
Q ss_pred CCCeEEEEeccccHHHHHHH----hcCCccEEE--EEECCHH---------HHHHHHhhchhhhcCCCCC--CEEEEEcc
Q 037807 68 NPKKVLLIGGGDGGILREIS----RHASVEQIH--ICEIDTM---------LINVYKEYFPEIAIGYEDS--RVILHVCD 130 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~----~~~~~~~v~--~VEid~~---------vi~~a~~~~~~~~~~~~~~--rv~v~~~D 130 (299)
+.-+||++|.|+|......+ +..+..++. .+|.++- .-++.+..+... ..++.. .++++.+|
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~-p~~~~~~v~L~l~~GD 174 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERV-PEYEGERLSLKVLLGD 174 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHC-SEEECSSEEEEEEESC
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhC-ccccCCcEEEEEEech
Confidence 34689999999998654332 333334454 4554321 112222111111 011233 45789999
Q ss_pred HHHHHHhcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhhh-cCCcee
Q 037807 131 GSEYLKTVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHRI-FKGSAS 209 (299)
Q Consensus 131 ~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~~-F~~~v~ 209 (299)
+.+.+.+....++|+|+.|.+.|... +.||+.++|+.++++++|||+|++.+.. . .+.+.|+++ |
T Consensus 175 a~~~l~~l~~~~~Da~flDgFsP~kN-PeLWs~e~f~~l~~~~~pgg~laTYtaa-----g---~VRR~L~~aGF----- 240 (308)
T 3vyw_A 175 ARKRIKEVENFKADAVFHDAFSPYKN-PELWTLDFLSLIKERIDEKGYWVSYSSS-----L---SVRKSLLTLGF----- 240 (308)
T ss_dssp HHHHGGGCCSCCEEEEEECCSCTTTS-GGGGSHHHHHHHHTTEEEEEEEEESCCC-----H---HHHHHHHHTTC-----
T ss_pred HHHHHhhhcccceeEEEeCCCCcccC-cccCCHHHHHHHHHHhCCCcEEEEEeCc-----H---HHHHHHHHCCC-----
Confidence 99999876445899999999988543 4699999999999999999999985422 2 233445443 4
Q ss_pred eeEEeecccCCcceeEEeccc
Q 037807 210 YAWTTVPTYPSGVIGFMLCST 230 (299)
Q Consensus 210 ~~~~~vP~~~~g~w~~~~ask 230 (299)
...-+|-|+ +-.-.+.|++
T Consensus 241 -~V~k~~G~g-~KReml~A~~ 259 (308)
T 3vyw_A 241 -KVGSSREIG-RKRKGTVASL 259 (308)
T ss_dssp -EEEEEECC----CEEEEEES
T ss_pred -EEEecCCCC-CCCceeEEec
Confidence 124577764 4566788887
No 262
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.74 E-value=1.2e-08 Score=95.17 Aligned_cols=99 Identities=15% Similarity=0.121 Sum_probs=73.4
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
....+|||||||+|..+..+++..+..+++++|+ +.+++.+++ .++++++.+|+.+ .. +.. |+|
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~D~~~---~~-p~~-D~v 263 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ----------FPGVTHVGGDMFK---EV-PSG-DTI 263 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----------CTTEEEEECCTTT---CC-CCC-SEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh----------cCCeEEEeCCcCC---CC-CCC-CEE
Confidence 3568999999999999999997545568999999 888876653 2689999999876 22 233 999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++...-+.-+.. -...+++++++.|+|||.+++..
T Consensus 264 ~~~~vlh~~~d~--~~~~~L~~~~~~L~pgG~l~i~e 298 (364)
T 3p9c_A 264 LMKWILHDWSDQ--HCATLLKNCYDALPAHGKVVLVQ 298 (364)
T ss_dssp EEESCGGGSCHH--HHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EehHHhccCCHH--HHHHHHHHHHHHcCCCCEEEEEE
Confidence 985432211100 01478999999999999888753
No 263
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.71 E-value=3.2e-08 Score=86.98 Aligned_cols=102 Identities=17% Similarity=0.116 Sum_probs=75.3
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
+.|.+|||||||.|-++..+. +..+++++|||+.+++.+++++... ..++++..+|...-. ..++||+|
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~-----g~~~~~~v~D~~~~~---~~~~~Dvv 172 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREK-----DWDFTFALQDVLCAP---PAEAGDLA 172 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHT-----TCEEEEEECCTTTSC---CCCBCSEE
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhc-----CCCceEEEeecccCC---CCCCcchH
Confidence 568899999999999998876 4679999999999999999997664 478899999965432 36799999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
++...-+.-.. .-....+ .+.+.|+++|++|..
T Consensus 173 Lllk~lh~LE~--q~~~~~~-~ll~aL~~~~vvVsf 205 (253)
T 3frh_A 173 LIFKLLPLLER--EQAGSAM-ALLQSLNTPRMAVSF 205 (253)
T ss_dssp EEESCHHHHHH--HSTTHHH-HHHHHCBCSEEEEEE
T ss_pred HHHHHHHHhhh--hchhhHH-HHHHHhcCCCEEEEc
Confidence 87533221000 0002234 677799999988853
No 264
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.70 E-value=1.3e-08 Score=87.07 Aligned_cols=123 Identities=15% Similarity=0.226 Sum_probs=79.7
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.+..+|||||||+|..+..+. .+|+++|+++. +++++.+|+.+. . .++++||+|
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~-------------------~~~~~~~d~~~~-~-~~~~~fD~v 119 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR-----NPVHCFDLASL-------------------DPRVTVCDMAQV-P-LEDESVDVA 119 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS-------------------STTEEESCTTSC-S-CCTTCEEEE
T ss_pred CCCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC-------------------CceEEEeccccC-C-CCCCCEeEE
Confidence 356799999999999988773 57999999987 245667776552 1 225789999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCC-cccchHHHHHHHHHHhhh-cCCceeeeEEeecccCCccee
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAES-LWFQQFSVQHLIDDCHRI-FKGSASYAWTTVPTYPSGVIG 224 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s-~~~~~~~~~~~~~~l~~~-F~~~v~~~~~~vP~~~~g~w~ 224 (299)
++...-.. . -...+++.+.+.|+|||.+++.... .+...+ .+.+.+++. | ..+ .+. +..+.|.
T Consensus 120 ~~~~~l~~-~----~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~---~~~~~l~~~Gf-~~~-----~~~-~~~~~~~ 184 (215)
T 2zfu_A 120 VFCLSLMG-T----NIRDFLEEANRVLKPGGLLKVAEVSSRFEDVR---TFLRAVTKLGF-KIV-----SKD-LTNSHFF 184 (215)
T ss_dssp EEESCCCS-S----CHHHHHHHHHHHEEEEEEEEEEECGGGCSCHH---HHHHHHHHTTE-EEE-----EEE-CCSTTCE
T ss_pred EEehhccc-c----CHHHHHHHHHHhCCCCeEEEEEEcCCCCCCHH---HHHHHHHHCCC-EEE-----EEe-cCCCeEE
Confidence 98644321 1 1278999999999999999885422 222233 333444332 4 222 122 2235677
Q ss_pred EEeccc
Q 037807 225 FMLCST 230 (299)
Q Consensus 225 ~~~ask 230 (299)
++.+.|
T Consensus 185 ~~~~~k 190 (215)
T 2zfu_A 185 LFDFQK 190 (215)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 778777
No 265
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.70 E-value=2e-08 Score=91.27 Aligned_cols=77 Identities=18% Similarity=0.153 Sum_probs=59.3
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.+..+|||||||+|.++..+++.. .+|++||+|+.+++.+++++... ..++++++.+|+.++. ..+||+|
T Consensus 41 ~~~~~VLDiG~G~G~lt~~La~~~--~~v~~vDi~~~~~~~a~~~~~~~----~~~~v~~~~~D~~~~~----~~~~D~V 110 (299)
T 2h1r_A 41 KSSDIVLEIGCGTGNLTVKLLPLA--KKVITIDIDSRMISEVKKRCLYE----GYNNLEVYEGDAIKTV----FPKFDVC 110 (299)
T ss_dssp CTTCEEEEECCTTSTTHHHHTTTS--SEEEEECSCHHHHHHHHHHHHHT----TCCCEEC----CCSSC----CCCCSEE
T ss_pred CCcCEEEEEcCcCcHHHHHHHhcC--CEEEEEECCHHHHHHHHHHHHHc----CCCceEEEECchhhCC----cccCCEE
Confidence 356799999999999999999873 68999999999999999987543 1268999999986642 3589999
Q ss_pred EEcCCCC
Q 037807 147 IIDAFDP 153 (299)
Q Consensus 147 i~D~~~~ 153 (299)
++|++..
T Consensus 111 v~n~py~ 117 (299)
T 2h1r_A 111 TANIPYK 117 (299)
T ss_dssp EEECCGG
T ss_pred EEcCCcc
Confidence 9987643
No 266
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.69 E-value=1.4e-08 Score=97.30 Aligned_cols=111 Identities=17% Similarity=0.146 Sum_probs=80.5
Q ss_pred CCCeEEEEeccccHHHHHHHhcC-------------CccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHH
Q 037807 68 NPKKVLLIGGGDGGILREISRHA-------------SVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEY 134 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~-------------~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~ 134 (299)
...+|||.|||+|+++..++++- ...+++++|+|+.++++|+.++...+ ....+++++.+|....
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g--~~~~~~~i~~gD~l~~ 248 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHG--IGTDRSPIVCEDSLEK 248 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTT--CCSSCCSEEECCTTTS
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhC--CCcCCCCEeeCCCCCC
Confidence 34689999999999999887641 23579999999999999998875432 2222678999997654
Q ss_pred HHhcCCCCccEEEEcCCCCCCCC--CC-----C------CcHHHHHHHHHhcCCCcEEEEec
Q 037807 135 LKTVQSGTFDAIIIDAFDPIRPG--HD-----L------FEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 135 l~~~~~~~fDvIi~D~~~~~~~~--~~-----l------~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
.. ..+||+|+++++-..... .. + ....|++.+.+.|+|||.+++-.
T Consensus 249 ~~---~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~ 307 (445)
T 2okc_A 249 EP---STLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVL 307 (445)
T ss_dssp CC---SSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cc---cCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEE
Confidence 21 358999999876432111 00 0 01479999999999999887644
No 267
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.67 E-value=6.2e-08 Score=86.14 Aligned_cols=77 Identities=13% Similarity=0.280 Sum_probs=61.7
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHH-Hhc-CCCCcc
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYL-KTV-QSGTFD 144 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l-~~~-~~~~fD 144 (299)
.+..+|||||||+|.++..+++.. .+|++||+|+.+++.+++.+.. .++++++.+|+.++- .+. ..+.||
T Consensus 28 ~~~~~VLEIG~G~G~lt~~La~~~--~~V~avEid~~~~~~~~~~~~~------~~~v~~i~~D~~~~~~~~~~~~~~~~ 99 (255)
T 3tqs_A 28 QKTDTLVEIGPGRGALTDYLLTEC--DNLALVEIDRDLVAFLQKKYNQ------QKNITIYQNDALQFDFSSVKTDKPLR 99 (255)
T ss_dssp CTTCEEEEECCTTTTTHHHHTTTS--SEEEEEECCHHHHHHHHHHHTT------CTTEEEEESCTTTCCGGGSCCSSCEE
T ss_pred CCcCEEEEEcccccHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHhh------CCCcEEEEcchHhCCHHHhccCCCeE
Confidence 356789999999999999999874 6899999999999999998753 368999999998762 222 135688
Q ss_pred EEEEcCCC
Q 037807 145 AIIIDAFD 152 (299)
Q Consensus 145 vIi~D~~~ 152 (299)
|+.+++.
T Consensus 100 -vv~NlPY 106 (255)
T 3tqs_A 100 -VVGNLPY 106 (255)
T ss_dssp -EEEECCH
T ss_pred -EEecCCc
Confidence 7777654
No 268
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.66 E-value=8.9e-08 Score=84.33 Aligned_cols=76 Identities=14% Similarity=0.175 Sum_probs=60.0
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.+..+|||||||+|.++..++++. .+|++||+|+.+++.+++++.. .++++++.+|+.++.... ...| .|
T Consensus 29 ~~~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~------~~~v~~~~~D~~~~~~~~-~~~~-~v 98 (244)
T 1qam_A 29 NEHDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTTENKLVD------HDNFQVLNKDILQFKFPK-NQSY-KI 98 (244)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHTTT------CCSEEEECCCGGGCCCCS-SCCC-EE
T ss_pred CCCCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHHHHhhcc------CCCeEEEEChHHhCCccc-CCCe-EE
Confidence 356799999999999999999874 6899999999999999998753 368999999987753211 2345 57
Q ss_pred EEcCCC
Q 037807 147 IIDAFD 152 (299)
Q Consensus 147 i~D~~~ 152 (299)
+++++.
T Consensus 99 v~nlPy 104 (244)
T 1qam_A 99 FGNIPY 104 (244)
T ss_dssp EEECCG
T ss_pred EEeCCc
Confidence 777654
No 269
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.64 E-value=3.9e-08 Score=87.59 Aligned_cols=82 Identities=11% Similarity=0.089 Sum_probs=65.9
Q ss_pred CeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhc--CCCC---CCEEEEEccHHHHHHhcCCCCcc
Q 037807 70 KKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAI--GYED---SRVILHVCDGSEYLKTVQSGTFD 144 (299)
Q Consensus 70 ~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~--~~~~---~rv~v~~~D~~~~l~~~~~~~fD 144 (299)
.+|||+|||.|..+.++++.. .+|++||+++.+.+++++.+..... ..+. .+++++.+|+.++++.. .++||
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g--~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~-~~~fD 166 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVG--CRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDI-TPRPQ 166 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHT--CCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTC-SSCCS
T ss_pred CEEEEcCCcCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhC-cccCC
Confidence 799999999999999999874 3799999999998888877654321 1111 47999999999998765 45799
Q ss_pred EEEEcCCCCC
Q 037807 145 AIIIDAFDPI 154 (299)
Q Consensus 145 vIi~D~~~~~ 154 (299)
+|++|+..+.
T Consensus 167 vV~lDP~y~~ 176 (258)
T 2oyr_A 167 VVYLDPMFPH 176 (258)
T ss_dssp EEEECCCCCC
T ss_pred EEEEcCCCCC
Confidence 9999987654
No 270
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.63 E-value=3.2e-08 Score=91.76 Aligned_cols=97 Identities=12% Similarity=0.158 Sum_probs=72.4
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAII 147 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi 147 (299)
...+|||||||+|..+..+++..+..+++++|+ +.+++.+++ .++++++.+|+.+ .. + .||+|+
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~d~~~---~~-~-~~D~v~ 256 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG----------NENLNFVGGDMFK---SI-P-SADAVL 256 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC----------CSSEEEEECCTTT---CC-C-CCSEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc----------CCCcEEEeCccCC---CC-C-CceEEE
Confidence 468999999999999999998654568999999 788876654 1469999999875 22 2 599999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHHhcCC---CcEEEEe
Q 037807 148 IDAFDPIRPGHDLFEGPFFELVAKALRP---GGAMCIQ 182 (299)
Q Consensus 148 ~D~~~~~~~~~~l~t~ef~~~~~~~Lkp---gGvlv~~ 182 (299)
+...-...+.. -...+++.+++.|+| ||.+++.
T Consensus 257 ~~~vlh~~~d~--~~~~~l~~~~~~L~p~~~gG~l~i~ 292 (358)
T 1zg3_A 257 LKWVLHDWNDE--QSLKILKNSKEAISHKGKDGKVIII 292 (358)
T ss_dssp EESCGGGSCHH--HHHHHHHHHHHHTGGGGGGCEEEEE
T ss_pred EcccccCCCHH--HHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 85432211110 013899999999999 9988774
No 271
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.61 E-value=1.9e-07 Score=82.71 Aligned_cols=100 Identities=16% Similarity=0.257 Sum_probs=70.4
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.+..+|||||||+|.++..+++.+ ..+|++||+|+.+++.++++ . ..+++++.+|+.++-.....+.| .|
T Consensus 30 ~~~~~VLDiG~G~G~lt~~L~~~~-~~~v~avEid~~~~~~~~~~-~-------~~~v~~i~~D~~~~~~~~~~~~~-~v 99 (249)
T 3ftd_A 30 EEGNTVVEVGGGTGNLTKVLLQHP-LKKLYVIELDREMVENLKSI-G-------DERLEVINEDASKFPFCSLGKEL-KV 99 (249)
T ss_dssp CTTCEEEEEESCHHHHHHHHTTSC-CSEEEEECCCHHHHHHHTTS-C-------CTTEEEECSCTTTCCGGGSCSSE-EE
T ss_pred CCcCEEEEEcCchHHHHHHHHHcC-CCeEEEEECCHHHHHHHHhc-c-------CCCeEEEEcchhhCChhHccCCc-EE
Confidence 356799999999999999999873 57899999999999999987 2 35899999999775221101233 77
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHh--cCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKA--LRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~--LkpgGvlv~~~ 183 (299)
+.+++... +..++..+.+. .-+.+++++|-
T Consensus 100 v~NlPy~i-------~~~il~~ll~~~~~~~~~~~m~Qk 131 (249)
T 3ftd_A 100 VGNLPYNV-------ASLIIENTVYNKDCVPLAVFMVQK 131 (249)
T ss_dssp EEECCTTT-------HHHHHHHHHHTGGGCSEEEEEEEH
T ss_pred EEECchhc-------cHHHHHHHHhcCCCCceEEEEEeH
Confidence 77776542 23333333332 34566777764
No 272
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.57 E-value=4.8e-08 Score=80.97 Aligned_cols=89 Identities=16% Similarity=0.204 Sum_probs=67.4
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHh-cCCCCccE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKT-VQSGTFDA 145 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~~fDv 145 (299)
++..+||+||||. +.+|+++.|++.|++.+. .+++++.+|+.+.... .++++||+
T Consensus 11 ~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~--------~~~~~~~~d~~~~~~~~~~~~~fD~ 66 (176)
T 2ld4_A 11 SAGQFVAVVWDKS----------------SPVEALKGLVDKLQALTG--------NEGRVSVENIKQLLQSAHKESSFDI 66 (176)
T ss_dssp CTTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTT--------TTSEEEEEEGGGGGGGCCCSSCEEE
T ss_pred CCCCEEEEecCCc----------------eeeeCCHHHHHHHHHhcc--------cCcEEEEechhcCccccCCCCCEeE
Confidence 4678999999985 239999999999998763 2489999998875431 13678999
Q ss_pred EEEcCCCCCC-CCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 146 IIIDAFDPIR-PGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 146 Ii~D~~~~~~-~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
|++...-... +. ...++++++++|||||.|++..
T Consensus 67 V~~~~~l~~~~~~----~~~~l~~~~r~LkpgG~l~~~~ 101 (176)
T 2ld4_A 67 ILSGLVPGSTTLH----SAEILAEIARILRPGGCLFLKE 101 (176)
T ss_dssp EEECCSTTCCCCC----CHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECChhhhcccC----HHHHHHHHHHHCCCCEEEEEEc
Confidence 9985433222 11 2889999999999999999853
No 273
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.55 E-value=3.3e-07 Score=82.22 Aligned_cols=122 Identities=14% Similarity=0.141 Sum_probs=92.9
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhc--CCCCccE
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTV--QSGTFDA 145 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~--~~~~fDv 145 (299)
++..+|++=+|+|.++.++++. ..+++.||.++..++..++++.. +.+++++..|+.++++.. +..+||+
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS~--~d~~vfvE~~~~a~~~L~~Nl~~------~~~~~V~~~D~~~~L~~l~~~~~~fdL 162 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLRS--QDRLYLCELHPTEYNFLLKLPHF------NKKVYVNHTDGVSKLNALLPPPEKRGL 162 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSCT--TSEEEEECCSHHHHHHHTTSCCT------TSCEEEECSCHHHHHHHHCSCTTSCEE
T ss_pred cCCCceeEeCCcHHHHHHHcCC--CCeEEEEeCCHHHHHHHHHHhCc------CCcEEEEeCcHHHHHHHhcCCCCCccE
Confidence 4677999999999999999983 38999999999999999999863 468999999999998754 2357999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHH--hcCCCcEEEEecCCcccchHHHHHHHHHHhhh
Q 037807 146 IIIDAFDPIRPGHDLFEGPFFELVAK--ALRPGGAMCIQAESLWFQQFSVQHLIDDCHRI 203 (299)
Q Consensus 146 Ii~D~~~~~~~~~~l~t~ef~~~~~~--~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~~ 203 (299)
|++|++..... .+ ....+.+.+ .+.++|++++-- |.........+.+.+++.
T Consensus 163 VfiDPPYe~k~---~~-~~vl~~L~~~~~r~~~Gi~v~WY--Pi~~~~~~~~~~~~l~~~ 216 (283)
T 2oo3_A 163 IFIDPSYERKE---EY-KEIPYAIKNAYSKFSTGLYCVWY--PVVNKAWTEQFLRKMREI 216 (283)
T ss_dssp EEECCCCCSTT---HH-HHHHHHHHHHHHHCTTSEEEEEE--EESSHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCc---HH-HHHHHHHHHhCccCCCeEEEEEE--eccchHHHHHHHHHHHhc
Confidence 99998664211 11 333444433 578899999744 445566677788888654
No 274
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.55 E-value=8.8e-08 Score=93.97 Aligned_cols=113 Identities=12% Similarity=0.003 Sum_probs=80.5
Q ss_pred CCCeEEEEeccccHHHHHHHhcC---C---------------ccEEEEEECCHHHHHHHHhhchhhhcCCCC---CCEEE
Q 037807 68 NPKKVLLIGGGDGGILREISRHA---S---------------VEQIHICEIDTMLINVYKEYFPEIAIGYED---SRVIL 126 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~---~---------------~~~v~~VEid~~vi~~a~~~~~~~~~~~~~---~rv~v 126 (299)
...+|||.|||+|+++..++++- . ..++.++|+|+.++++|+.++...+ ... .+.++
T Consensus 169 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~g--i~~~~~~~~~I 246 (541)
T 2ar0_A 169 PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHD--IEGNLDHGGAI 246 (541)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTT--CCCBGGGTBSE
T ss_pred CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhC--CCccccccCCe
Confidence 35689999999999998877531 0 2379999999999999998865431 111 13789
Q ss_pred EEccHHHHHHhcCCCCccEEEEcCCCCCCCCC----------CCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 127 HVCDGSEYLKTVQSGTFDAIIIDAFDPIRPGH----------DLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 127 ~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~----------~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
+.+|........ ..+||+|+.+++....... .-....|++.+.+.|+|||.+++-.
T Consensus 247 ~~gDtL~~~~~~-~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~ 312 (541)
T 2ar0_A 247 RLGNTLGSDGEN-LPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVV 312 (541)
T ss_dssp EESCTTSHHHHT-SCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EeCCCccccccc-ccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEe
Confidence 999987643222 4689999999865322110 0112479999999999999887654
No 275
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.54 E-value=3.7e-07 Score=89.49 Aligned_cols=134 Identities=14% Similarity=0.052 Sum_probs=91.5
Q ss_pred CCCeEEEEeccccHHHHHHHhc---CCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHH--HHhcCCCC
Q 037807 68 NPKKVLLIGGGDGGILREISRH---ASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEY--LKTVQSGT 142 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~---~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~--l~~~~~~~ 142 (299)
...+|||.+||+|+++..++++ ....++.++|+|+.++++|+.++... +...++++++.+|.... .. ....+
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~--gi~~~~~~I~~gDtL~~d~p~-~~~~~ 297 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILH--GVPIENQFLHNADTLDEDWPT-QEPTN 297 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHT--TCCGGGEEEEESCTTTSCSCC-SSCCC
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHc--CCCcCccceEecceecccccc-ccccc
Confidence 4569999999999999888765 23568999999999999999987543 22225789999997653 11 12578
Q ss_pred ccEEEEcCCCCCCC--CC------C------C-----CcHHHHHHHHHhcC-CCcEEEEecCCccc-chHHHHHHHHHHh
Q 037807 143 FDAIIIDAFDPIRP--GH------D------L-----FEGPFFELVAKALR-PGGAMCIQAESLWF-QQFSVQHLIDDCH 201 (299)
Q Consensus 143 fDvIi~D~~~~~~~--~~------~------l-----~t~ef~~~~~~~Lk-pgGvlv~~~~s~~~-~~~~~~~~~~~l~ 201 (299)
||+|+.++|..... .. . + ....|++.+.+.|+ +||++++-..+.++ .......+.+.|-
T Consensus 298 fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g~Lf~~~~~~~iRk~Ll 377 (542)
T 3lkd_A 298 FDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHGVLFRGNAEGTIRKALL 377 (542)
T ss_dssp BSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETHHHHCCTHHHHHHHHHH
T ss_pred ccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecchHhhCCchhHHHHHHHH
Confidence 99999998753211 00 0 0 11358999999999 99988765544333 2223445555555
Q ss_pred hhc
Q 037807 202 RIF 204 (299)
Q Consensus 202 ~~F 204 (299)
+.+
T Consensus 378 e~~ 380 (542)
T 3lkd_A 378 EEG 380 (542)
T ss_dssp HTT
T ss_pred hCC
Confidence 443
No 276
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.54 E-value=9.6e-10 Score=96.86 Aligned_cols=77 Identities=21% Similarity=0.269 Sum_probs=60.9
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.+..+|||||||+|.++..++++. .+|++||+|+.+++.+++++. ..++++++.+|+.++.... +++| .|
T Consensus 28 ~~~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~~------~~~~v~~~~~D~~~~~~~~-~~~f-~v 97 (245)
T 1yub_A 28 KETDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKLK------LNTRVTLIHQDILQFQFPN-KQRY-KI 97 (245)
T ss_dssp CSSEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTTT------TCSEEEECCSCCTTTTCCC-SSEE-EE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHhc------cCCceEEEECChhhcCccc-CCCc-EE
Confidence 356789999999999999999874 689999999999999988764 1468999999987753211 2578 77
Q ss_pred EEcCCCC
Q 037807 147 IIDAFDP 153 (299)
Q Consensus 147 i~D~~~~ 153 (299)
+++++..
T Consensus 98 v~n~Py~ 104 (245)
T 1yub_A 98 VGNIPYH 104 (245)
T ss_dssp EEECCSS
T ss_pred EEeCCcc
Confidence 8776543
No 277
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.53 E-value=4.3e-08 Score=96.21 Aligned_cols=134 Identities=10% Similarity=-0.022 Sum_probs=87.8
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCC---------------ccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccH
Q 037807 67 PNPKKVLLIGGGDGGILREISRHAS---------------VEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDG 131 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~---------------~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~ 131 (299)
+.+.+|||.+||+|+++..++++-. ..++.++|+|+.++++|+.++...+ . +.++.++.+|.
T Consensus 243 p~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g--i-~~~i~i~~gDt 319 (544)
T 3khk_A 243 PYKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRG--I-DFNFGKKNADS 319 (544)
T ss_dssp CCSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTT--C-CCBCCSSSCCT
T ss_pred cCCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhC--C-Ccccceeccch
Confidence 3445999999999999888754310 3579999999999999999875532 1 23355577886
Q ss_pred HHHHHhcCCCCccEEEEcCCCCCC-------------------------CCCCCCcHHHHHHHHHhcCCCcEEEEecCCc
Q 037807 132 SEYLKTVQSGTFDAIIIDAFDPIR-------------------------PGHDLFEGPFFELVAKALRPGGAMCIQAESL 186 (299)
Q Consensus 132 ~~~l~~~~~~~fDvIi~D~~~~~~-------------------------~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s~ 186 (299)
..... ....+||+|++++|.... ++..-....|++.+.+.|+|||.+++-..+.
T Consensus 320 L~~~~-~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g 398 (544)
T 3khk_A 320 FLDDQ-HPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANG 398 (544)
T ss_dssp TTSCS-CTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETH
T ss_pred hcCcc-cccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecch
Confidence 54321 124689999999875421 0111112369999999999999877654333
Q ss_pred ccc-h-HHHHHHHHHHhhhc
Q 037807 187 WFQ-Q-FSVQHLIDDCHRIF 204 (299)
Q Consensus 187 ~~~-~-~~~~~~~~~l~~~F 204 (299)
++. . .....+.+.|-+.+
T Consensus 399 ~L~~~~~~~~~iRk~Lle~~ 418 (544)
T 3khk_A 399 SMSSNTNNEGEIRKTLVEQD 418 (544)
T ss_dssp HHHCCGGGHHHHHHHHHHTT
T ss_pred hhhcCcchHHHHHHHHHhCC
Confidence 322 1 24455666665544
No 278
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.53 E-value=2.2e-06 Score=79.69 Aligned_cols=135 Identities=15% Similarity=0.193 Sum_probs=97.0
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcC--CCCCCEEEEEccHHHHHHhcCCCCcc
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIG--YEDSRVILHVCDGSEYLKTVQSGTFD 144 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~--~~~~rv~v~~~D~~~~l~~~~~~~fD 144 (299)
.+..+|||+++|.|+=+..++.......|+++|+++.-++..++++...+.. ....++.+...|+..+-... .++||
T Consensus 147 ~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~-~~~fD 225 (359)
T 4fzv_A 147 QPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELE-GDTYD 225 (359)
T ss_dssp CTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHS-TTCEE
T ss_pred CCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhc-cccCC
Confidence 3457999999999999988887655678999999999999999887655211 12357999999999886544 67899
Q ss_pred EEEEcCCCCC---C---CCCC-CC-------------cHHHHHHHHHhcCCCcEEEEecCCccc--chHHHHHHHHHHhh
Q 037807 145 AIIIDAFDPI---R---PGHD-LF-------------EGPFFELVAKALRPGGAMCIQAESLWF--QQFSVQHLIDDCHR 202 (299)
Q Consensus 145 vIi~D~~~~~---~---~~~~-l~-------------t~ef~~~~~~~LkpgGvlv~~~~s~~~--~~~~~~~~~~~l~~ 202 (299)
.|++|++-.. + .... .+ ..+++..+.+.|||||+||-.+.|... +...+..+++....
T Consensus 226 ~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ENE~vV~~~L~~~~~ 305 (359)
T 4fzv_A 226 RVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELLAN 305 (359)
T ss_dssp EEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTTTTHHHHHHHHHHHHH
T ss_pred EEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchhhCHHHHHHHHHhCCC
Confidence 9999998542 1 1111 11 246777888999999999977655433 23455555555443
No 279
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.51 E-value=1.3e-07 Score=85.18 Aligned_cols=109 Identities=12% Similarity=0.003 Sum_probs=83.3
Q ss_pred CCCCeEEEEeccccHHHHHHHhcC-----CccEEEEEECCHH--------------------------HHHHHHhhchhh
Q 037807 67 PNPKKVLLIGGGDGGILREISRHA-----SVEQIHICEIDTM--------------------------LINVYKEYFPEI 115 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~-----~~~~v~~VEid~~--------------------------vi~~a~~~~~~~ 115 (299)
..|++||++|+..|..+..+++.. +..+|+++|..+. .++.+++++...
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 458899999999999988875421 2467999996421 466778887754
Q ss_pred hcCCCCCCEEEEEccHHHHHHhcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 116 AIGYEDSRVILHVCDGSEYLKTVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 116 ~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++..++++++.+|+.+.+.+.+.++||+|.+|.... -.+.++|+.+...|+|||++++.-
T Consensus 185 --gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y------~~~~~~Le~~~p~L~pGGiIv~DD 244 (282)
T 2wk1_A 185 --DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLY------ESTWDTLTNLYPKVSVGGYVIVDD 244 (282)
T ss_dssp --TCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCSH------HHHHHHHHHHGGGEEEEEEEEESS
T ss_pred --CCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCcc------ccHHHHHHHHHhhcCCCEEEEEcC
Confidence 233479999999999988766457899999996320 014688999999999999999854
No 280
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.50 E-value=4.3e-07 Score=91.78 Aligned_cols=136 Identities=12% Similarity=0.108 Sum_probs=88.1
Q ss_pred CCCeEEEEeccccHHHHHHHhcCC---ccEEEEEECCHHHHHHH--HhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCC
Q 037807 68 NPKKVLLIGGGDGGILREISRHAS---VEQIHICEIDTMLINVY--KEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGT 142 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~---~~~v~~VEid~~vi~~a--~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~ 142 (299)
...+|||.|||+|+++..++++.+ ..++.++|+|+.++++| +.++.............+...|....-.. ...+
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~-~~~k 399 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPE-DFAN 399 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGG-GGTT
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhccccc-ccCC
Confidence 467999999999999999987542 35799999999999999 55543211000112345666666542111 2468
Q ss_pred ccEEEEcCCCCCCCC--------------------CC-----CCcHHHHHHHHHhcCCCcEEEEecCCcccc--hHHHHH
Q 037807 143 FDAIIIDAFDPIRPG--------------------HD-----LFEGPFFELVAKALRPGGAMCIQAESLWFQ--QFSVQH 195 (299)
Q Consensus 143 fDvIi~D~~~~~~~~--------------------~~-----l~t~ef~~~~~~~LkpgGvlv~~~~s~~~~--~~~~~~ 195 (299)
||+||+++|...... .. -....|++.+.+.|++||.+++-..+.++. ......
T Consensus 400 FDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~Lf~sg~~~kk 479 (878)
T 3s1s_A 400 VSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYLTAQGNESKA 479 (878)
T ss_dssp EEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHHHHCCSHHHHH
T ss_pred CCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHHhccCChHHHH
Confidence 999999987632100 00 012458899999999999988766555542 223455
Q ss_pred HHHHHhhhc
Q 037807 196 LIDDCHRIF 204 (299)
Q Consensus 196 ~~~~l~~~F 204 (299)
+.+.|.+.+
T Consensus 480 LRk~LLe~~ 488 (878)
T 3s1s_A 480 FREFLVGNF 488 (878)
T ss_dssp HHHHHTTTT
T ss_pred HHHHHHhCC
Confidence 666665554
No 281
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.47 E-value=2.3e-07 Score=93.69 Aligned_cols=113 Identities=13% Similarity=0.091 Sum_probs=77.9
Q ss_pred CCCeEEEEeccccHHHHHHHhcC------------------------------------------CccEEEEEECCHHHH
Q 037807 68 NPKKVLLIGGGDGGILREISRHA------------------------------------------SVEQIHICEIDTMLI 105 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~------------------------------------------~~~~v~~VEid~~vi 105 (299)
....|||.+||+|+++.+++... ...+|+++|+|+.++
T Consensus 190 ~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av 269 (703)
T 3v97_A 190 PGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVI 269 (703)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHH
T ss_pred CCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHH
Confidence 45689999999999999887531 114799999999999
Q ss_pred HHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHh---cCCCcEEEEe
Q 037807 106 NVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKA---LRPGGAMCIQ 182 (299)
Q Consensus 106 ~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~---LkpgGvlv~~ 182 (299)
+.|++++...+. ...+++..+|+.++......++||+|++|++........--..++|+.+.+. +.|||.+.+-
T Consensus 270 ~~A~~N~~~agv---~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~il 346 (703)
T 3v97_A 270 QRARTNARLAGI---GELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLF 346 (703)
T ss_dssp HHHHHHHHHTTC---GGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHHHHHHHcCC---CCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCeEEEE
Confidence 999999876521 2469999999987532211238999999987643211111124566666544 4579987764
Q ss_pred c
Q 037807 183 A 183 (299)
Q Consensus 183 ~ 183 (299)
+
T Consensus 347 t 347 (703)
T 3v97_A 347 S 347 (703)
T ss_dssp E
T ss_pred e
Confidence 4
No 282
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.35 E-value=3e-07 Score=82.01 Aligned_cols=150 Identities=13% Similarity=0.097 Sum_probs=89.5
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
....+|||||||.|+.+..+++..++.+++++++..++. .-+...... ..++..+.++... ....+++||+|
T Consensus 73 ~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~-----~~pi~~~~~-g~~ii~~~~~~dv--~~l~~~~~DlV 144 (277)
T 3evf_A 73 KLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGH-----EKPMNVQSL-GWNIITFKDKTDI--HRLEPVKCDTL 144 (277)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTC-----CCCCCCCBT-TGGGEEEECSCCT--TTSCCCCCSEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCc-----ccccccCcC-CCCeEEEecccee--hhcCCCCccEE
Confidence 355689999999999999988776678888888874421 001110000 1133444454311 12236789999
Q ss_pred EEcCCCCCCCC--CCCCcHHHHHHHHHhcCCC-cEEEEecCCcccchHHHHHHHHHHhhhcCCceeeeEEeecc-cCCcc
Q 037807 147 IIDAFDPIRPG--HDLFEGPFFELVAKALRPG-GAMCIQAESLWFQQFSVQHLIDDCHRIFKGSASYAWTTVPT-YPSGV 222 (299)
Q Consensus 147 i~D~~~~~~~~--~~l~t~ef~~~~~~~Lkpg-Gvlv~~~~s~~~~~~~~~~~~~~l~~~F~~~v~~~~~~vP~-~~~g~ 222 (299)
++|.....+.. ...-+...++.+.+.|+|| |.|++..-.|+ ...+..+++.+++.|. .|. ..-|+ =....
T Consensus 145 lsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~py--g~~~~~l~~~lk~~F~-~V~---~~KPaSR~~S~ 218 (277)
T 3evf_A 145 LCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAPY--MPDVLEKLELLQRRFG-GTV---IRNPLSRNSTH 218 (277)
T ss_dssp EECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTT--SHHHHHHHHHHHHHHC-CEE---ECCTTSCTTCC
T ss_pred EecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCC--CccHHHHHHHHHHhcC-CEE---EEeCCCCCCCC
Confidence 99975442221 1111223467778999999 99999543332 3457788999999994 443 33451 11222
Q ss_pred eeEEeccc
Q 037807 223 IGFMLCST 230 (299)
Q Consensus 223 w~~~~ask 230 (299)
=.|++|-.
T Consensus 219 E~Y~V~~~ 226 (277)
T 3evf_A 219 EMYYVSGA 226 (277)
T ss_dssp CEEEESSC
T ss_pred ceEEEEec
Confidence 34666644
No 283
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.32 E-value=1.4e-06 Score=78.40 Aligned_cols=78 Identities=21% Similarity=0.270 Sum_probs=57.9
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCc--cEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHH-HhcCC-C-
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASV--EQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYL-KTVQS-G- 141 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~--~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l-~~~~~-~- 141 (299)
.+..+|||||||+|.++..+++.... .+|++||+|+.+++.+++++ .++++++.+|+.++- .+... .
T Consensus 41 ~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~--------~~~v~~i~~D~~~~~~~~~~~~~~ 112 (279)
T 3uzu_A 41 ERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF--------GELLELHAGDALTFDFGSIARPGD 112 (279)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH--------GGGEEEEESCGGGCCGGGGSCSSS
T ss_pred CCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc--------CCCcEEEECChhcCChhHhccccc
Confidence 35679999999999999999986321 23999999999999999873 248999999998752 22111 1
Q ss_pred -CccEEEEcCCC
Q 037807 142 -TFDAIIIDAFD 152 (299)
Q Consensus 142 -~fDvIi~D~~~ 152 (299)
..+.|+.+++.
T Consensus 113 ~~~~~vv~NlPY 124 (279)
T 3uzu_A 113 EPSLRIIGNLPY 124 (279)
T ss_dssp SCCEEEEEECCH
T ss_pred CCceEEEEccCc
Confidence 23567777654
No 284
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.32 E-value=8.7e-07 Score=78.53 Aligned_cols=78 Identities=12% Similarity=0.097 Sum_probs=57.3
Q ss_pred CCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHH-HHhcC--CCCcc
Q 037807 68 NPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEY-LKTVQ--SGTFD 144 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~-l~~~~--~~~fD 144 (299)
+..+|||||||+|.++. +.+ ....+|++||+|+.+++.+++.+.. .++++++.+|+.++ +.+.. .+..|
T Consensus 21 ~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~~~~~~a~~~~~~------~~~v~~i~~D~~~~~~~~~~~~~~~~~ 92 (252)
T 1qyr_A 21 KGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDRDLAARLQTHPFL------GPKLTIYQQDAMTFNFGELAEKMGQPL 92 (252)
T ss_dssp TTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCHHHHHHHHTCTTT------GGGEEEECSCGGGCCHHHHHHHHTSCE
T ss_pred CcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCHHHHHHHHHHhcc------CCceEEEECchhhCCHHHhhcccCCce
Confidence 45789999999999999 654 2212399999999999999998753 25899999999774 22110 12357
Q ss_pred EEEEcCCCC
Q 037807 145 AIIIDAFDP 153 (299)
Q Consensus 145 vIi~D~~~~ 153 (299)
.|+.+++..
T Consensus 93 ~vvsNlPY~ 101 (252)
T 1qyr_A 93 RVFGNLPYN 101 (252)
T ss_dssp EEEEECCTT
T ss_pred EEEECCCCC
Confidence 888887653
No 285
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.31 E-value=1.3e-06 Score=86.97 Aligned_cols=108 Identities=19% Similarity=0.165 Sum_probs=74.4
Q ss_pred CCeEEEEeccccHHHHHHHhc----C---------CccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHH
Q 037807 69 PKKVLLIGGGDGGILREISRH----A---------SVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYL 135 (299)
Q Consensus 69 ~~~VL~IG~G~G~~~~~l~~~----~---------~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l 135 (299)
.+.|||||||+|.+...+++. . ...+|.+||.++..+...+.... + ++ ..+|+++.+|.+++-
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-N--g~-~d~VtVI~gd~eev~ 485 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-R--TW-KRRVTIIESDMRSLP 485 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-H--TT-TTCSEEEESCGGGHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-c--CC-CCeEEEEeCchhhcc
Confidence 457999999999996543221 1 23489999999977665554332 1 23 358999999999874
Q ss_pred H---hcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 136 K---TVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 136 ~---~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
. ....++.|+||+..-...+..+ | ..+.+..+.+.|||||+++=+
T Consensus 486 lp~~~~~~ekVDIIVSElmGsfl~nE-L-~pe~Ld~v~r~Lkp~Gi~iP~ 533 (745)
T 3ua3_A 486 GIAKDRGFEQPDIIVSELLGSFGDNE-L-SPECLDGVTGFLKPTTISIPQ 533 (745)
T ss_dssp HHHHHTTCCCCSEEEECCCBTTBGGG-S-HHHHHHTTGGGSCTTCEEESC
T ss_pred cccccCCCCcccEEEEeccccccchh-c-cHHHHHHHHHhCCCCcEEECC
Confidence 3 1115789999997664322211 2 367888888999999998743
No 286
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.30 E-value=2.8e-07 Score=91.55 Aligned_cols=103 Identities=16% Similarity=0.191 Sum_probs=73.9
Q ss_pred CCeEEEEeccccHHHHHHHh---cCC-ccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCcc
Q 037807 69 PKKVLLIGGGDGGILREISR---HAS-VEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFD 144 (299)
Q Consensus 69 ~~~VL~IG~G~G~~~~~l~~---~~~-~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fD 144 (299)
.+.|||+|+|+|-+....++ ... ..+|.+||.++ +...+++....+ ++ +.+|+++.+|.+++- . +++.|
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N--~~-~dkVtVI~gd~eev~--L-PEKVD 430 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFE--EW-GSQVTVVSSDMREWV--A-PEKAD 430 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHH--TT-GGGEEEEESCTTTCC--C-SSCEE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhc--cC-CCeEEEEeCcceecc--C-CcccC
Confidence 35799999999998554443 221 23789999998 566677765544 23 468999999998762 3 68999
Q ss_pred EEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEE
Q 037807 145 AIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMC 180 (299)
Q Consensus 145 vIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv 180 (299)
+||+.........+.+ .+.+....+.|||||+++
T Consensus 431 IIVSEwMG~fLl~E~m--levL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 431 IIVSELLGSFADNELS--PECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp EEECCCCBTTBGGGCH--HHHHHHHGGGEEEEEEEE
T ss_pred EEEEEcCcccccccCC--HHHHHHHHHhcCCCcEEc
Confidence 9998766543333322 467777888999999987
No 287
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.29 E-value=3.2e-07 Score=81.93 Aligned_cols=148 Identities=12% Similarity=0.036 Sum_probs=89.8
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEc--cHHHHHHhcCCCCcc
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVC--DGSEYLKTVQSGTFD 144 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~--D~~~~l~~~~~~~fD 144 (299)
.+..+|||||||.|+.+..+++..++.+|+++|+...+...+... ..+ ..++..... |.. ....+++|
T Consensus 89 k~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-----~~~-g~~ii~~~~~~dv~----~l~~~~~D 158 (282)
T 3gcz_A 89 KPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-----TTL-GWNLIRFKDKTDVF----NMEVIPGD 158 (282)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-----CBT-TGGGEEEECSCCGG----GSCCCCCS
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-----ccC-CCceEEeeCCcchh----hcCCCCcC
Confidence 345689999999999999988765688899999976532111110 000 122222332 322 22367899
Q ss_pred EEEEcCCCCCCCC--CCCCcHHHHHHHHHhcCCC--cEEEEecCCcccchHHHHHHHHHHhhhcCCceeeeEEeecc-cC
Q 037807 145 AIIIDAFDPIRPG--HDLFEGPFFELVAKALRPG--GAMCIQAESLWFQQFSVQHLIDDCHRIFKGSASYAWTTVPT-YP 219 (299)
Q Consensus 145 vIi~D~~~~~~~~--~~l~t~ef~~~~~~~Lkpg--Gvlv~~~~s~~~~~~~~~~~~~~l~~~F~~~v~~~~~~vP~-~~ 219 (299)
+|++|.....+.. .+.-+.+.++.+.+.|+|| |.|++..-.++ ...+..+++.+++.|. .|. ..-|+ =.
T Consensus 159 vVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~py--g~~~~~l~~~lk~~F~-~V~---~~KPaSR~ 232 (282)
T 3gcz_A 159 TLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCPY--TPLIMEELSRLQLKHG-GGL---VRVPLSRN 232 (282)
T ss_dssp EEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCCC--SHHHHHHHHHHHHHHC-CEE---ECCTTSCT
T ss_pred EEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecCC--CccHHHHHHHHHHhcC-CEE---EEcCCCcc
Confidence 9999976543321 1112234567778999999 99998542222 3457788999999994 443 33451 11
Q ss_pred CcceeEEeccc
Q 037807 220 SGVIGFMLCST 230 (299)
Q Consensus 220 ~g~w~~~~ask 230 (299)
...=.|++|-.
T Consensus 233 ~S~E~Y~V~~~ 243 (282)
T 3gcz_A 233 STHEMYWVSGT 243 (282)
T ss_dssp TCCCEEEETTC
T ss_pred cCcceeEEEec
Confidence 22234666654
No 288
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.19 E-value=7.1e-06 Score=73.48 Aligned_cols=84 Identities=15% Similarity=0.060 Sum_probs=66.6
Q ss_pred HHHHHhhcccCCCCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHH
Q 037807 55 QEMITHLPLCSIPNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEY 134 (299)
Q Consensus 55 ~e~l~~~~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~ 134 (299)
+|++..+. ..+...+||.+||.|+.++.+++. ..+|+++|.||.+++.|++ +. ++|++++++|..++
T Consensus 12 ~e~le~L~---~~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~-L~-------~~rv~lv~~~f~~l 78 (285)
T 1wg8_A 12 QEALDLLA---VRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKG-LH-------LPGLTVVQGNFRHL 78 (285)
T ss_dssp HHHHHHHT---CCTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHH-TC-------CTTEEEEESCGGGH
T ss_pred HHHHHhhC---CCCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHh-hc-------cCCEEEEECCcchH
Confidence 55555442 234578999999999999999987 3589999999999999998 64 26999999999776
Q ss_pred ---HHhcCCCCccEEEEcCC
Q 037807 135 ---LKTVQSGTFDAIIIDAF 151 (299)
Q Consensus 135 ---l~~~~~~~fDvIi~D~~ 151 (299)
+.+...+++|.|++|+.
T Consensus 79 ~~~L~~~g~~~vDgIL~DLG 98 (285)
T 1wg8_A 79 KRHLAALGVERVDGILADLG 98 (285)
T ss_dssp HHHHHHTTCSCEEEEEEECS
T ss_pred HHHHHHcCCCCcCEEEeCCc
Confidence 54433367999999864
No 289
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.12 E-value=7.4e-06 Score=73.60 Aligned_cols=158 Identities=12% Similarity=0.047 Sum_probs=92.5
Q ss_pred HHHHHhhcccCCCCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEc-cHHH
Q 037807 55 QEMITHLPLCSIPNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVC-DGSE 133 (299)
Q Consensus 55 ~e~l~~~~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~-D~~~ 133 (299)
.|+... .++ ++..+||||||+.|+.+..+++..++..|+++|+...... .+.....+...-+.+..+ |.+
T Consensus 71 ~ei~ek-~l~--~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~-----~P~~~~~~~~~iv~~~~~~di~- 141 (300)
T 3eld_A 71 RWLHER-GYL--RITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHE-----KPIHMQTLGWNIVKFKDKSNVF- 141 (300)
T ss_dssp HHHHHH-TSC--CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSC-----CCCCCCBTTGGGEEEECSCCTT-
T ss_pred HHHHHh-CCC--CCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccc-----ccccccccCCceEEeecCceee-
Confidence 445444 333 4678999999999999999998666888999999653210 000000000111222211 322
Q ss_pred HHHhcCCCCccEEEEcCCCCCCCC--CCCCcHHHHHHHHHhcCCC-cEEEEecCCcccchHHHHHHHHHHhhhcCCceee
Q 037807 134 YLKTVQSGTFDAIIIDAFDPIRPG--HDLFEGPFFELVAKALRPG-GAMCIQAESLWFQQFSVQHLIDDCHRIFKGSASY 210 (299)
Q Consensus 134 ~l~~~~~~~fDvIi~D~~~~~~~~--~~l~t~ef~~~~~~~Lkpg-Gvlv~~~~s~~~~~~~~~~~~~~l~~~F~~~v~~ 210 (299)
....+++|+|++|.....+.. .+.-+...++.+.+.|+|| |.|++..-.+| ...+..++..|+..|. .|.
T Consensus 142 ---~l~~~~~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~y--G~~~~~ll~~lk~~F~-~V~- 214 (300)
T 3eld_A 142 ---TMPTEPSDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPY--HPDVIEKLERLQLRFG-GGI- 214 (300)
T ss_dssp ---TSCCCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESSTT--SHHHHHHHHHHHHHHC-CEE-
T ss_pred ---ecCCCCcCEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecccc--CccHHHHHHHHHHhCC-cEE-
Confidence 123578999999975443221 1111234577778999999 99999543322 3457788999999994 442
Q ss_pred eEEeec-ccCCcceeEEeccc
Q 037807 211 AWTTVP-TYPSGVIGFMLCST 230 (299)
Q Consensus 211 ~~~~vP-~~~~g~w~~~~ask 230 (299)
..-| +=+...=.|++|-.
T Consensus 215 --~~KPaSR~~S~E~Y~V~~~ 233 (300)
T 3eld_A 215 --VRVPFSRNSTHEMYYISGA 233 (300)
T ss_dssp --ECCTTSCTTCCCEEEESSC
T ss_pred --EEeCCCCCCChHHeeeccC
Confidence 3345 11122234566644
No 290
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.10 E-value=1.4e-05 Score=80.03 Aligned_cols=114 Identities=19% Similarity=0.256 Sum_probs=84.8
Q ss_pred CCeEEEEeccccHHHHHHHhcC------------CccEEEEEEC---CHHHHHHHHhhchhh-----------hc-----
Q 037807 69 PKKVLLIGGGDGGILREISRHA------------SVEQIHICEI---DTMLINVYKEYFPEI-----------AI----- 117 (299)
Q Consensus 69 ~~~VL~IG~G~G~~~~~l~~~~------------~~~~v~~VEi---d~~vi~~a~~~~~~~-----------~~----- 117 (299)
.-+||++|.|+|......++.. ..-.++.+|. +++.+..+-..++.. ..
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 4689999999999877765421 1245789999 888887555543321 00
Q ss_pred ---CCCC--CCEEEEEccHHHHHHhcC---CCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 118 ---GYED--SRVILHVCDGSEYLKTVQ---SGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 118 ---~~~~--~rv~v~~~D~~~~l~~~~---~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
.+++ -+++++.+|+.+.+.+.. ..+||+|++|.+.|... +.||+.++|+.+.+.++|||.+++.+
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~n-p~~w~~~~~~~l~~~~~~g~~~~t~~ 219 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKN-PDMWTQNLFNAMARLARPGGTLATFT 219 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGC-GGGSCHHHHHHHHHHEEEEEEEEESC
T ss_pred eEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCC-hhhhhHHHHHHHHHHhCCCCEEEecc
Confidence 0222 457799999999998752 36799999999987543 46999999999999999999999754
No 291
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.03 E-value=3.2e-05 Score=77.70 Aligned_cols=115 Identities=23% Similarity=0.295 Sum_probs=82.6
Q ss_pred CCCeEEEEeccccHHHHHHHhcC------------CccEEEEEEC---CHHHHHHHHhhchhhh----------------
Q 037807 68 NPKKVLLIGGGDGGILREISRHA------------SVEQIHICEI---DTMLINVYKEYFPEIA---------------- 116 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~------------~~~~v~~VEi---d~~vi~~a~~~~~~~~---------------- 116 (299)
++.+||++|.|+|.....+.+.. ..-+++.+|. +.+.+..+-+.++...
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 45689999999999887765421 1256899999 5555554433333210
Q ss_pred ---cCCCCC--CEEEEEccHHHHHHhcC---CCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 117 ---IGYEDS--RVILHVCDGSEYLKTVQ---SGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 117 ---~~~~~~--rv~v~~~D~~~~l~~~~---~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
..+++. +++++.+|+.+.+++.. ...+|.|++|.+.|... +.+|+.++|..+.+.+++||.+.+.+
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~n-p~~w~~~~~~~l~~~~~~g~~~~t~~ 211 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKN-PDMWNEQLFNAMARMTRPGGTFSTFT 211 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--C-CTTCSHHHHHHHHHHEEEEEEEEESC
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCC-hhhhhHHHHHHHHHHhCCCCEEEecc
Confidence 012232 67899999999998652 36899999999988643 45899999999999999999998754
No 292
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.81 E-value=5.4e-05 Score=66.66 Aligned_cols=134 Identities=16% Similarity=0.126 Sum_probs=82.1
Q ss_pred HHHHHhhcccCCCCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCE---EEEEc-c
Q 037807 55 QEMITHLPLCSIPNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRV---ILHVC-D 130 (299)
Q Consensus 55 ~e~l~~~~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv---~v~~~-D 130 (299)
.|+-... + ..+..+||||||+-|+-+..+++..++..|.+..+-... ...+.. ...+.+ ++..+ |
T Consensus 63 ~EIdeK~-l--ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-----~~~P~~---~~~~Gv~~i~~~~G~D 131 (269)
T 2px2_A 63 RWLVERR-F--VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-----HEEPML---MQSYGWNIVTMKSGVD 131 (269)
T ss_dssp HHHHHTT-S--CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-----SCCCCC---CCSTTGGGEEEECSCC
T ss_pred HHHHHcC-C--CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-----ccCCCc---ccCCCceEEEeeccCC
Confidence 5555443 3 355789999999999999999887555555555443321 001110 001344 44446 8
Q ss_pred HHHHHHhcCCCCccEEEEcCCCCCCCC--CCCCcHHHHHHHHHhcCCCc-EEEEecCCcccchHHHHHHHHHHhhhcC
Q 037807 131 GSEYLKTVQSGTFDAIIIDAFDPIRPG--HDLFEGPFFELVAKALRPGG-AMCIQAESLWFQQFSVQHLIDDCHRIFK 205 (299)
Q Consensus 131 ~~~~l~~~~~~~fDvIi~D~~~~~~~~--~~l~t~ef~~~~~~~LkpgG-vlv~~~~s~~~~~~~~~~~~~~l~~~F~ 205 (299)
.++ ....++|+|++|.....+.. .+.-+...+..+.+.|+||| .|++..-. ...+.+.+.++.+++.|.
T Consensus 132 f~~----~~~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq--g~~~~~~~~l~~lk~~F~ 203 (269)
T 2px2_A 132 VFY----KPSEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC--PYMPKVIEKLESLQRRFG 203 (269)
T ss_dssp GGG----SCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC--TTSHHHHHHHHHHHHHHC
T ss_pred ccC----CCCCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC--CCchHHHHHHHHHHHHcC
Confidence 765 22568999999986542221 11112235666778999999 89985422 112567788889999994
No 293
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.65 E-value=9.2e-05 Score=66.39 Aligned_cols=150 Identities=17% Similarity=0.247 Sum_probs=85.2
Q ss_pred hhHHHHHHhhcc--cCCCCCCeEEEEec------cccHH-HHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCC
Q 037807 52 CAYQEMITHLPL--CSIPNPKKVLLIGG------GDGGI-LREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDS 122 (299)
Q Consensus 52 ~~Y~e~l~~~~l--~~~~~~~~VL~IG~------G~G~~-~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~ 122 (299)
.-|.++-..+-- +..|...+||++|+ -.|+. ++.+ .+....|+.+|+.+-+ .+.
T Consensus 91 ~kytqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS~VLr~~--~p~g~~VVavDL~~~~---------------sda 153 (344)
T 3r24_A 91 AKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTAVLRQW--LPTGTLLVDSDLNDFV---------------SDA 153 (344)
T ss_dssp HHHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHHHHHHHH--SCTTCEEEEEESSCCB---------------CSS
T ss_pred HHHHHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcHHHHHHh--CCCCcEEEEeeCcccc---------------cCC
Confidence 357665444321 23567899999996 44552 2222 2222489999997743 122
Q ss_pred CEEEEEccHHHHHHhcCCCCccEEEEcCCCCC-CC--CCC---C-CcHHHHHHHHHhcCCCcEEEEecCCcccchHHHHH
Q 037807 123 RVILHVCDGSEYLKTVQSGTFDAIIIDAFDPI-RP--GHD---L-FEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQH 195 (299)
Q Consensus 123 rv~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~-~~--~~~---l-~t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~ 195 (299)
. .++.+|..+.. ...+||+||+|..... +. ... . +.+..+.-+.+.|+|||.|++.. +.... . +
T Consensus 154 ~-~~IqGD~~~~~---~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKV---FQGsg-~-~ 224 (344)
T 3r24_A 154 D-STLIGDCATVH---TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKI---TEHSW-N-A 224 (344)
T ss_dssp S-EEEESCGGGEE---ESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEE---CSSSC-C-H
T ss_pred C-eEEEccccccc---cCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEE---ecCCC-H-H
Confidence 3 34899965522 2578999999986543 22 111 1 23555667889999999999864 11111 1 2
Q ss_pred HHHHHhhhcCCceeeeEEeecccCCcceeEEeccc
Q 037807 196 LIDDCHRIFKGSASYAWTTVPTYPSGVIGFMLCST 230 (299)
Q Consensus 196 ~~~~l~~~F~~~v~~~~~~vP~~~~g~w~~~~ask 230 (299)
.+..+++.| ..+..+....- ...--.|++|..
T Consensus 225 ~L~~lrk~F-~~VK~fK~ASR--a~SsEvYLVG~g 256 (344)
T 3r24_A 225 DLYKLMGHF-SWWTAFVTNVN--ASSSEAFLIGAN 256 (344)
T ss_dssp HHHHHHTTE-EEEEEEEEGGG--TTSSCEEEEEEE
T ss_pred HHHHHHhhC-CeEEEECCCCC--CCCeeEEEEeee
Confidence 345566688 44544321111 112234777754
No 294
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.62 E-value=0.00028 Score=61.41 Aligned_cols=140 Identities=16% Similarity=0.109 Sum_probs=92.1
Q ss_pred hhHHHHHHhhcccCCCCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEc-c
Q 037807 52 CAYQEMITHLPLCSIPNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVC-D 130 (299)
Q Consensus 52 ~~Y~e~l~~~~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~-D 130 (299)
+--.|+.... ++ ....+||||||+.|+.+..++...++.+|.++|+-+.-- ..|.+-..+.-+.++++.+ |
T Consensus 65 ~KL~ei~ek~-~l--~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~gh-----e~P~~~~s~gwn~v~fk~gvD 136 (267)
T 3p8z_A 65 AKLQWFVERN-MV--IPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGH-----EEPVPMSTYGWNIVKLMSGKD 136 (267)
T ss_dssp HHHHHHHHTT-SS--CCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTS-----CCCCCCCCTTTTSEEEECSCC
T ss_pred HHHHHHHHhc-CC--CCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCc-----cCcchhhhcCcCceEEEeccc
Confidence 3335665554 33 345699999999999999988877889999999975422 1121111223367899988 8
Q ss_pred HHHHHHhcCCCCccEEEEcCCCCCCCC--CCCCcHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhhhcCC
Q 037807 131 GSEYLKTVQSGTFDAIIIDAFDPIRPG--HDLFEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHRIFKG 206 (299)
Q Consensus 131 ~~~~l~~~~~~~fDvIi~D~~~~~~~~--~~l~t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~~F~~ 206 (299)
.+. + +...+|.|+||.....+.+ +.--|...++.+.+.|++ |-|++..-+++. ..+.+.++.++..|.+
T Consensus 137 v~~-~---~~~~~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~--p~v~e~l~~lq~~fgg 207 (267)
T 3p8z_A 137 VFY-L---PPEKCDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYM--PTVIEHLERLQRKHGG 207 (267)
T ss_dssp GGG-C---CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCS--HHHHHHHHHHHHHHCC
T ss_pred eee-c---CCccccEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCC--hhHHHHHHHHHHHhCC
Confidence 632 2 2577999999986622211 111234467777889998 888887655543 2345777888888843
No 295
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.58 E-value=0.00013 Score=71.20 Aligned_cols=133 Identities=14% Similarity=0.093 Sum_probs=83.4
Q ss_pred CCCeEEEEeccccHHHHHHHhc----CC---------ccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHH
Q 037807 68 NPKKVLLIGGGDGGILREISRH----AS---------VEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEY 134 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~----~~---------~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~ 134 (299)
...+|+|-+||+|+++..+.++ .. ...+.++|+|+.+..+|+-++-..+ ...-++..+|...+
T Consensus 217 ~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg----~~~~~I~~~dtL~~ 292 (530)
T 3ufb_A 217 LGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHG----LEYPRIDPENSLRF 292 (530)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHT----CSCCEEECSCTTCS
T ss_pred CCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcC----CccccccccccccC
Confidence 3468999999999998877542 11 1369999999999999998765432 22346777887543
Q ss_pred HH-h-cCCCCccEEEEcCCCCCCC------------CCCCCcHHHHHHHHHhcC-------CCcEEEEecCCc-ccchHH
Q 037807 135 LK-T-VQSGTFDAIIIDAFDPIRP------------GHDLFEGPFFELVAKALR-------PGGAMCIQAESL-WFQQFS 192 (299)
Q Consensus 135 l~-~-~~~~~fDvIi~D~~~~~~~------------~~~l~t~ef~~~~~~~Lk-------pgGvlv~~~~s~-~~~~~~ 192 (299)
-. . ....+||+|+.++|..... ...-...-|++.+.+.|+ +||++++-..+. ......
T Consensus 293 ~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~g~Lf~~~~ 372 (530)
T 3ufb_A 293 PLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNGTLFSDGI 372 (530)
T ss_dssp CGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEHHHHHCCTH
T ss_pred chhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEecchhhhccch
Confidence 21 1 1235799999998753211 111112457888888887 699877644322 222222
Q ss_pred HHHHHHHHhhhc
Q 037807 193 VQHLIDDCHRIF 204 (299)
Q Consensus 193 ~~~~~~~l~~~F 204 (299)
...+.+.|-+.+
T Consensus 373 ~~~iRk~Lle~~ 384 (530)
T 3ufb_A 373 SARIKEELLKNF 384 (530)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHhhcC
Confidence 344555555444
No 296
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.53 E-value=0.00027 Score=64.80 Aligned_cols=75 Identities=21% Similarity=0.147 Sum_probs=59.3
Q ss_pred CCCeEEEEeccccHHHHHHHhc-CCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHH---HhcC-CCC
Q 037807 68 NPKKVLLIGGGDGGILREISRH-ASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYL---KTVQ-SGT 142 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l---~~~~-~~~ 142 (299)
+...++|..+|.|+-++.+++. .+..+|+++|.|+.+++.++ .+ .+.|++++.++..++. .+.. .++
T Consensus 57 pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL-------~~~Rv~lv~~nF~~l~~~L~~~g~~~~ 128 (347)
T 3tka_A 57 PDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI-------DDPRFSIIHGPFSALGEYVAERDLIGK 128 (347)
T ss_dssp TTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC-------CCTTEEEEESCGGGHHHHHHHTTCTTC
T ss_pred CCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh-------cCCcEEEEeCCHHHHHHHHHhcCCCCc
Confidence 4578999999999999999975 45678999999999999995 34 2479999999887654 3321 136
Q ss_pred ccEEEEcC
Q 037807 143 FDAIIIDA 150 (299)
Q Consensus 143 fDvIi~D~ 150 (299)
+|.|+.|+
T Consensus 129 vDgILfDL 136 (347)
T 3tka_A 129 IDGILLDL 136 (347)
T ss_dssp EEEEEEEC
T ss_pred ccEEEECC
Confidence 99999976
No 297
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.50 E-value=0.00024 Score=63.73 Aligned_cols=138 Identities=16% Similarity=0.179 Sum_probs=88.7
Q ss_pred HHHHHhhcccCCCCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEc-cHHH
Q 037807 55 QEMITHLPLCSIPNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVC-DGSE 133 (299)
Q Consensus 55 ~e~l~~~~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~-D~~~ 133 (299)
.++.... ++ ....+||||||+.|+.+..++...++.+|.++|+-..--+ .|.+-..+.-+-++++.+ |.+.
T Consensus 84 ~ei~~~~-~l--~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he-----~P~~~~ql~w~lV~~~~~~Dv~~ 155 (321)
T 3lkz_A 84 RWLVERR-FL--EPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHE-----EPQLVQSYGWNIVTMKSGVDVFY 155 (321)
T ss_dssp HHHHHTT-SC--CCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSC-----CCCCCCBTTGGGEEEECSCCTTS
T ss_pred HHHHHhc-CC--CCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCcc-----CcchhhhcCCcceEEEeccCHhh
Confidence 4555442 22 3456999999999999998888778899999999654110 111101111233777766 6532
Q ss_pred HHHhcCCCCccEEEEcCCCCCCCC--CCCCcHHHHHHHHHhcCCC-cEEEEecCCcccchHHHHHHHHHHhhhcCC
Q 037807 134 YLKTVQSGTFDAIIIDAFDPIRPG--HDLFEGPFFELVAKALRPG-GAMCIQAESLWFQQFSVQHLIDDCHRIFKG 206 (299)
Q Consensus 134 ~l~~~~~~~fDvIi~D~~~~~~~~--~~l~t~ef~~~~~~~Lkpg-Gvlv~~~~s~~~~~~~~~~~~~~l~~~F~~ 206 (299)
+. ...+|+|++|.....+.+ +.--|...++.+.+.|++| |-|++..-+|+. ..+.+.++.|+..|.+
T Consensus 156 -l~---~~~~D~ivcDigeSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY~--~~v~e~l~~lq~~fgg 225 (321)
T 3lkz_A 156 -RP---SECCDTLLCDIGESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPYM--PKVIEKMELLQRRYGG 225 (321)
T ss_dssp -SC---CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTS--HHHHHHHHHHHHHHCC
T ss_pred -CC---CCCCCEEEEECccCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCCC--hHHHHHHHHHHHHhCC
Confidence 22 467999999987432221 1112344677778999999 899987655543 3455778888888843
No 298
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.49 E-value=0.00011 Score=68.11 Aligned_cols=59 Identities=20% Similarity=0.117 Sum_probs=50.2
Q ss_pred CCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHH
Q 037807 69 PKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEY 134 (299)
Q Consensus 69 ~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~ 134 (299)
...||+||.|.|.+++.+++.....+|++||+|+..+...++.+ . .++++++.+|+.++
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~------~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E------GSPLQILKRDPYDW 117 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T------TSSCEEECSCTTCH
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c------CCCEEEEECCccch
Confidence 47899999999999999998633368999999999999888765 2 36899999999765
No 299
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.44 E-value=0.00037 Score=64.75 Aligned_cols=72 Identities=14% Similarity=0.178 Sum_probs=55.4
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
.+..+|||||++.|+.+..++++. .+|++||+.+-- .. +. .+++|+++.+|++.+... .+.+|+|
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~rg--~~V~aVD~~~l~-~~----l~------~~~~V~~~~~d~~~~~~~--~~~~D~v 274 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKRN--MWVYSVDNGPMA-QS----LM------DTGQVTWLREDGFKFRPT--RSNISWM 274 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTT--CEEEEECSSCCC-HH----HH------TTTCEEEECSCTTTCCCC--SSCEEEE
T ss_pred CCCCEEEEeCcCCCHHHHHHHHCC--CEEEEEEhhhcC-hh----hc------cCCCeEEEeCccccccCC--CCCcCEE
Confidence 356899999999999999999884 589999975421 11 11 368999999999887542 4689999
Q ss_pred EEcCCCC
Q 037807 147 IIDAFDP 153 (299)
Q Consensus 147 i~D~~~~ 153 (299)
++|...+
T Consensus 275 vsDm~~~ 281 (375)
T 4auk_A 275 VCDMVEK 281 (375)
T ss_dssp EECCSSC
T ss_pred EEcCCCC
Confidence 9998653
No 300
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.27 E-value=0.0008 Score=62.92 Aligned_cols=109 Identities=12% Similarity=0.023 Sum_probs=65.7
Q ss_pred CCeEEEEeccccHHHHHHHhc-----------------CCccEEEEEECC-----------HHHHHHHHhhchhhhcCCC
Q 037807 69 PKKVLLIGGGDGGILREISRH-----------------ASVEQIHICEID-----------TMLINVYKEYFPEIAIGYE 120 (299)
Q Consensus 69 ~~~VL~IG~G~G~~~~~l~~~-----------------~~~~~v~~VEid-----------~~vi~~a~~~~~~~~~~~~ 120 (299)
+.+|+|+||++|..+..+... ++.-+|..-|+- +...+..++... .
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g------~ 126 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENG------R 126 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTC------C
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhcc------C
Confidence 688999999999988765533 233456666765 333333222111 0
Q ss_pred CCCEEEEEccHHHHHHhc-CCCCccEEEEcCCCCCCC--CCCCCc---------------------------------HH
Q 037807 121 DSRVILHVCDGSEYLKTV-QSGTFDAIIIDAFDPIRP--GHDLFE---------------------------------GP 164 (299)
Q Consensus 121 ~~rv~v~~~D~~~~l~~~-~~~~fDvIi~D~~~~~~~--~~~l~t---------------------------------~e 164 (299)
..+--++.+....|-.+. +.+++|+|++...-+|.. +..+.. ..
T Consensus 127 ~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~ 206 (384)
T 2efj_A 127 KIGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTT 206 (384)
T ss_dssp CTTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHH
Confidence 122355566655554332 578999999977655532 111110 12
Q ss_pred HHHHHHHhcCCCcEEEEec
Q 037807 165 FFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 165 f~~~~~~~LkpgGvlv~~~ 183 (299)
|++..++.|+|||.+++..
T Consensus 207 FL~~Ra~eL~pGG~mvl~~ 225 (384)
T 2efj_A 207 FLRIHSEELISRGRMLLTF 225 (384)
T ss_dssp HHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHhccCCeEEEEE
Confidence 4777799999999999876
No 301
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.14 E-value=0.00064 Score=63.39 Aligned_cols=117 Identities=14% Similarity=0.168 Sum_probs=69.2
Q ss_pred CCCCeEEEEeccccHHHHHHHh--------c-------CCccEEEEEECCHHHHHHHHhhchhhhcCC--------CCCC
Q 037807 67 PNPKKVLLIGGGDGGILREISR--------H-------ASVEQIHICEIDTMLINVYKEYFPEIAIGY--------EDSR 123 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~--------~-------~~~~~v~~VEid~~vi~~a~~~~~~~~~~~--------~~~r 123 (299)
+++.+|+|+|||+|..+..+.. + ++.-+|..-|+-..-....=+.++...... ...+
T Consensus 51 ~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~ 130 (374)
T 3b5i_A 51 PPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNR 130 (374)
T ss_dssp CCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCB
T ss_pred CCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCC
Confidence 4578999999999998876621 1 134567777776665544433343321000 0011
Q ss_pred EEEEEccHHHHHHh-cCCCCccEEEEcCCCCCCC--CCCCC-------------------------c-------HHHHHH
Q 037807 124 VILHVCDGSEYLKT-VQSGTFDAIIIDAFDPIRP--GHDLF-------------------------E-------GPFFEL 168 (299)
Q Consensus 124 v~v~~~D~~~~l~~-~~~~~fDvIi~D~~~~~~~--~~~l~-------------------------t-------~ef~~~ 168 (299)
-.++.+.+..|-.+ .+++++|+|++...-++.. +..+. . ..|++.
T Consensus 131 ~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ 210 (374)
T 3b5i_A 131 SYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRA 210 (374)
T ss_dssp CSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 22444444443322 2578999999977665532 11111 0 236788
Q ss_pred HHHhcCCCcEEEEec
Q 037807 169 VAKALRPGGAMCIQA 183 (299)
Q Consensus 169 ~~~~LkpgGvlv~~~ 183 (299)
.++.|+|||.|++..
T Consensus 211 ra~eL~pGG~mvl~~ 225 (374)
T 3b5i_A 211 RAAEVKRGGAMFLVC 225 (374)
T ss_dssp HHHHEEEEEEEEEEE
T ss_pred HHHHhCCCCEEEEEE
Confidence 899999999999865
No 302
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.10 E-value=0.00057 Score=61.49 Aligned_cols=47 Identities=21% Similarity=0.082 Sum_probs=41.2
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhh
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEI 115 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~ 115 (299)
.+...|||++||+|.++.++++.. .++++||+++.+++.|++++...
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~g--~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARWG--RRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHHHHh
Confidence 456789999999999999998874 58999999999999999987654
No 303
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=97.09 E-value=0.00096 Score=61.64 Aligned_cols=99 Identities=12% Similarity=0.078 Sum_probs=66.9
Q ss_pred CCCCeEEEEeccc-cHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccE
Q 037807 67 PNPKKVLLIGGGD-GGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDA 145 (299)
Q Consensus 67 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDv 145 (299)
....+||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-. +.-+.....|..+-+.+...+.+|+
T Consensus 189 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa-------~~vi~~~~~~~~~~~~~~~~gg~D~ 261 (371)
T 1f8f_A 189 TPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGA-------THVINSKTQDPVAAIKEITDGGVNF 261 (371)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTC-------SEEEETTTSCHHHHHHHHTTSCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCC-------CEEecCCccCHHHHHHHhcCCCCcE
Confidence 3568999999876 6677778886566679999999999999886421 1001111134444444432347999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 146 IIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 146 Ii~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
|+-.... .+.++.+.+.|+++|.+++-
T Consensus 262 vid~~g~----------~~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 262 ALESTGS----------PEILKQGVDALGILGKIAVV 288 (371)
T ss_dssp EEECSCC----------HHHHHHHHHTEEEEEEEEEC
T ss_pred EEECCCC----------HHHHHHHHHHHhcCCEEEEe
Confidence 9843221 46788999999999999874
No 304
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.08 E-value=0.00075 Score=62.58 Aligned_cols=115 Identities=13% Similarity=0.078 Sum_probs=76.9
Q ss_pred CCCCCeEEEEeccccHHHHHHHhc----------------CCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEc
Q 037807 66 IPNPKKVLLIGGGDGGILREISRH----------------ASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVC 129 (299)
Q Consensus 66 ~~~~~~VL~IG~G~G~~~~~l~~~----------------~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~ 129 (299)
.+++-+|+|+||++|..+..+... ++.-+|...|+-.......-+.++... ...+--++.+
T Consensus 49 ~~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~---~~~~~~f~~g 125 (359)
T 1m6e_X 49 VTTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEN---DVDGVCFING 125 (359)
T ss_dssp SSSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSC---SCTTCEEEEE
T ss_pred CCCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhc---ccCCCEEEEe
Confidence 356678999999999865433221 345678899999988888877776431 1113456666
Q ss_pred cHHHHHHhc-CCCCccEEEEcCCCCCCC--CC--------------------CCCc-------HHHHHHHHHhcCCCcEE
Q 037807 130 DGSEYLKTV-QSGTFDAIIIDAFDPIRP--GH--------------------DLFE-------GPFFELVAKALRPGGAM 179 (299)
Q Consensus 130 D~~~~l~~~-~~~~fDvIi~D~~~~~~~--~~--------------------~l~t-------~ef~~~~~~~LkpgGvl 179 (299)
....|-.+. +.+++|+|++...-+|.. +. ..|. ..|++..++.|+|||.+
T Consensus 126 vpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~m 205 (359)
T 1m6e_X 126 VPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRM 205 (359)
T ss_dssp EESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEE
T ss_pred cchhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceE
Confidence 665554332 578999999976544421 11 1332 34688889999999999
Q ss_pred EEec
Q 037807 180 CIQA 183 (299)
Q Consensus 180 v~~~ 183 (299)
++..
T Consensus 206 vl~~ 209 (359)
T 1m6e_X 206 VLTI 209 (359)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9865
No 305
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=97.06 E-value=0.0044 Score=56.91 Aligned_cols=99 Identities=17% Similarity=0.089 Sum_probs=69.1
Q ss_pred CCCCeEEEEeccc-cHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEE-----ccHHHHHHhc-C
Q 037807 67 PNPKKVLLIGGGD-GGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHV-----CDGSEYLKTV-Q 139 (299)
Q Consensus 67 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~-----~D~~~~l~~~-~ 139 (299)
....+||++|+|. |.++..+++..+...|++++.+++-.+.+++. . +.-+.... .|..+-+++. .
T Consensus 178 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~-------~~~~~~~~~~~~~~~~~~~v~~~t~ 249 (363)
T 3m6i_A 178 RLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-C-------PEVVTHKVERLSAEESAKKIVESFG 249 (363)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-C-------TTCEEEECCSCCHHHHHHHHHHHTS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-c-------hhcccccccccchHHHHHHHHHHhC
Confidence 4568999999865 66777888877766699999999999999986 3 11222221 2334444433 2
Q ss_pred CCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 140 SGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 140 ~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
...+|+|+-.... ...++.+.+.|+++|.+++-.
T Consensus 250 g~g~Dvvid~~g~----------~~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 250 GIEPAVALECTGV----------ESSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp SCCCSEEEECSCC----------HHHHHHHHHHSCTTCEEEECC
T ss_pred CCCCCEEEECCCC----------hHHHHHHHHHhcCCCEEEEEc
Confidence 4579999843221 457889999999999998743
No 306
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=97.03 E-value=0.0025 Score=58.46 Aligned_cols=97 Identities=15% Similarity=0.153 Sum_probs=65.7
Q ss_pred CCCCeEEEEeccc-cHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEE------ccHHHHHHhcC
Q 037807 67 PNPKKVLLIGGGD-GGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHV------CDGSEYLKTVQ 139 (299)
Q Consensus 67 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~------~D~~~~l~~~~ 139 (299)
....+||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-. + .++. .|..+-+.+..
T Consensus 170 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa-------~---~vi~~~~~~~~~~~~~i~~~~ 239 (356)
T 1pl8_A 170 TLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGA-------D---LVLQISKESPQEIARKVEGQL 239 (356)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC-------S---EEEECSSCCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCC-------C---EEEcCcccccchHHHHHHHHh
Confidence 3568999999875 6677778887666689999999999998886421 1 2222 12222333221
Q ss_pred CCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 140 SGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 140 ~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
.+.+|+|+-.... ...++.+.+.|+++|.++.-.
T Consensus 240 ~~g~D~vid~~g~----------~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 240 GCKPEVTIECTGA----------EASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp TSCCSEEEECSCC----------HHHHHHHHHHSCTTCEEEECS
T ss_pred CCCCCEEEECCCC----------hHHHHHHHHHhcCCCEEEEEe
Confidence 3579999843321 456788899999999998743
No 307
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.01 E-value=0.0005 Score=55.52 Aligned_cols=80 Identities=14% Similarity=0.064 Sum_probs=51.7
Q ss_pred CCCCeEEEEecccc-HHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccE
Q 037807 67 PNPKKVLLIGGGDG-GILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDA 145 (299)
Q Consensus 67 ~~~~~VL~IG~G~G-~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDv 145 (299)
..+.+||+||||.| ..+..|+++.+ ..|+++|++|..++ ++.+|.++-..+. -+.||+
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~~g-~~V~atDInp~Av~-------------------~v~dDiF~P~~~~-Y~~~DL 92 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKHSK-VDLVLTDIKPSHGG-------------------IVRDDITSPRMEI-YRGAAL 92 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHHSC-CEEEEECSSCSSTT-------------------EECCCSSSCCHHH-HTTEEE
T ss_pred CCCCcEEEEccCCChHHHHHHHHhCC-CeEEEEECCccccc-------------------eEEccCCCCcccc-cCCcCE
Confidence 34679999999999 59999887544 47999999987655 4555654422211 147999
Q ss_pred EEE-cCCCCCCCCCCCCcHHHHHHHHHhcCC
Q 037807 146 III-DAFDPIRPGHDLFEGPFFELVAKALRP 175 (299)
Q Consensus 146 Ii~-D~~~~~~~~~~l~t~ef~~~~~~~Lkp 175 (299)
|.. .++. .| ...+..+++...-
T Consensus 93 IYsirPP~------El--~~~i~~lA~~v~a 115 (153)
T 2k4m_A 93 IYSIRPPA------EI--HSSLMRVADAVGA 115 (153)
T ss_dssp EEEESCCT------TT--HHHHHHHHHHHTC
T ss_pred EEEcCCCH------HH--HHHHHHHHHHcCC
Confidence 953 3322 22 3445556655543
No 308
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.96 E-value=0.0028 Score=58.31 Aligned_cols=147 Identities=16% Similarity=0.172 Sum_probs=89.1
Q ss_pred CCeEEEEeccccHHHHHHHhcCC-ccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHh-cCCCCccEE
Q 037807 69 PKKVLLIGGGDGGILREISRHAS-VEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKT-VQSGTFDAI 146 (299)
Q Consensus 69 ~~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~~fDvI 146 (299)
+.+|+++.||.|++...+.+... .+.|.++|+|+..++..+.+++. ..++.+|..++..+ .+...+|+|
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~---------~~~~~~Di~~~~~~~~~~~~~D~l 72 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH---------TQLLAKTIEGITLEEFDRLSFDMI 72 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT---------SCEECSCGGGCCHHHHHHHCCSEE
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccc---------cccccCCHHHccHhHcCcCCcCEE
Confidence 45899999999999999887631 46799999999999999998853 24667887765421 111269999
Q ss_pred EEcCCCCC----CCC-------CCCCcHHHHHHHHHhcC--CCcEEEEecCCcccchHHHHHHHHHHhhhcCCceeeeEE
Q 037807 147 IIDAFDPI----RPG-------HDLFEGPFFELVAKALR--PGGAMCIQAESLWFQQFSVQHLIDDCHRIFKGSASYAWT 213 (299)
Q Consensus 147 i~D~~~~~----~~~-------~~l~t~ef~~~~~~~Lk--pgGvlv~~~~s~~~~~~~~~~~~~~l~~~F~~~v~~~~~ 213 (299)
+.+++... +.. ..|+ .++++ +.+.++ |.-+++=|.... .....+..+++.|++.= ..+.....
T Consensus 73 ~~gpPCq~fS~ag~~~g~~d~r~~l~-~~~~~-~i~~~~~~P~~~~~ENV~~l-~~~~~~~~i~~~l~~~G-Y~v~~~vl 148 (343)
T 1g55_A 73 LMSPPCQPFTRIGRQGDMTDSRTNSF-LHILD-ILPRLQKLPKYILLENVKGF-EVSSTRDLLIQTIENCG-FQYQEFLL 148 (343)
T ss_dssp EECCC------------------CHH-HHHHH-HGGGCSSCCSEEEEEEETTG-GGSHHHHHHHHHHHHTT-EEEEEEEE
T ss_pred EEcCCCcchhhcCCcCCccCccchHH-HHHHH-HHHHhcCCCCEEEEeCCccc-cCHHHHHHHHHHHHHCC-CeeEEEEE
Confidence 99876321 110 1111 23333 445667 876666455332 23456777777776541 12222111
Q ss_pred e-----ecccCCcceeEEeccc
Q 037807 214 T-----VPTYPSGVIGFMLCST 230 (299)
Q Consensus 214 ~-----vP~~~~g~w~~~~ask 230 (299)
. +|.- -.-.|++|++
T Consensus 149 ~a~~~GvPQ~--R~R~~iv~~~ 168 (343)
T 1g55_A 149 SPTSLGIPNS--RLRYFLIAKL 168 (343)
T ss_dssp CGGGGTCSCC--CCEEEEEEEE
T ss_pred EHHHCCCCCc--ccEEEEEEEe
Confidence 1 3332 2356888886
No 309
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.94 E-value=0.0017 Score=59.21 Aligned_cols=98 Identities=17% Similarity=0.298 Sum_probs=68.8
Q ss_pred CCCCeEEEEeccc-cHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccE
Q 037807 67 PNPKKVLLIGGGD-GGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDA 145 (299)
Q Consensus 67 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDv 145 (299)
....+||++|+|. |.++..+++..+. +|++++.+++-.+.+++.-. +.-+.....|..+.+.+. .+.+|+
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa-------~~~i~~~~~~~~~~~~~~-~g~~d~ 235 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGA-------EVAVNARDTDPAAWLQKE-IGGAHG 235 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTC-------SEEEETTTSCHHHHHHHH-HSSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCC-------CEEEeCCCcCHHHHHHHh-CCCCCE
Confidence 3568999999875 7788888887665 89999999999999887421 101111113555555543 347999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 146 IIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 146 Ii~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
|+..... .+.++.+.+.|+++|.++.-.
T Consensus 236 vid~~g~----------~~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 236 VLVTAVS----------PKAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp EEESSCC----------HHHHHHHHHHEEEEEEEEECS
T ss_pred EEEeCCC----------HHHHHHHHHHhccCCEEEEeC
Confidence 9855322 567889999999999998743
No 310
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.85 E-value=0.002 Score=59.59 Aligned_cols=100 Identities=18% Similarity=0.189 Sum_probs=69.0
Q ss_pred CCCCeEEEEeccc-cHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHh---cCCCC
Q 037807 67 PNPKKVLLIGGGD-GGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKT---VQSGT 142 (299)
Q Consensus 67 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~---~~~~~ 142 (299)
....+||++|+|. |.++..+++..+..+|++++.+++-.+.+++.=. +.-+.....|..+.+.+ ...+.
T Consensus 181 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa-------~~vi~~~~~~~~~~i~~~~~~~~gg 253 (370)
T 4ej6_A 181 KAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGA-------TATVDPSAGDVVEAIAGPVGLVPGG 253 (370)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTC-------SEEECTTSSCHHHHHHSTTSSSTTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC-------CEEECCCCcCHHHHHHhhhhccCCC
Confidence 4568999999865 6677778887776689999999999999887421 10011112355555554 22347
Q ss_pred ccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 143 FDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 143 fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
+|+|+-.... .+.++.+.+.|+++|.+++-.
T Consensus 254 ~Dvvid~~G~----------~~~~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 254 VDVVIECAGV----------AETVKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp EEEEEECSCC----------HHHHHHHHHHEEEEEEEEECS
T ss_pred CCEEEECCCC----------HHHHHHHHHHhccCCEEEEEe
Confidence 9999843221 567889999999999998743
No 311
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.82 E-value=0.033 Score=50.79 Aligned_cols=146 Identities=13% Similarity=0.064 Sum_probs=92.4
Q ss_pred CCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEEE
Q 037807 69 PKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAIII 148 (299)
Q Consensus 69 ~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi~ 148 (299)
..+|+++.||.|++...+.+. +.+.+.++|+|+..++..+.+++.. . .+|..++..+. -..+|+|+.
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a-G~~~v~~~e~d~~a~~t~~~N~~~~------~-----~~Di~~~~~~~-~~~~D~l~~ 77 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC-GAECVYSNEWDKYAQEVYEMNFGEK------P-----EGDITQVNEKT-IPDHDILCA 77 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT-TCEEEEEECCCHHHHHHHHHHHSCC------C-----BSCGGGSCGGG-SCCCSEEEE
T ss_pred CCcEEEECCCcCHHHHHHHHC-CCeEEEEEeCCHHHHHHHHHHcCCC------C-----cCCHHHcCHhh-CCCCCEEEE
Confidence 468999999999999998876 4678899999999999999987632 1 58887765433 346999999
Q ss_pred cCCCCC----CCC-------CCCCcHHHHHHHHHhcCCCcEEEEecCCcccc--hHHHHHHHHHHhhhcCCceeeeEEee
Q 037807 149 DAFDPI----RPG-------HDLFEGPFFELVAKALRPGGAMCIQAESLWFQ--QFSVQHLIDDCHRIFKGSASYAWTTV 215 (299)
Q Consensus 149 D~~~~~----~~~-------~~l~t~ef~~~~~~~LkpgGvlv~~~~s~~~~--~~~~~~~~~~l~~~F~~~v~~~~~~v 215 (299)
+++... +.. ..|+ .++++. .+.++|.-+++=|....... ...+..+++.|++.= ..+......-
T Consensus 78 gpPCQ~fS~ag~~~g~~d~r~~L~-~~~~r~-i~~~~P~~~~~ENV~gl~~~~~~~~~~~i~~~l~~~G-Y~v~~~vl~a 154 (327)
T 2c7p_A 78 GFPCQAFSISGKQKGFEDSRGTLF-FDIARI-VREKKPKVVFMENVKNFASHDNGNTLEVVKNTMNELD-YSFHAKVLNA 154 (327)
T ss_dssp ECCCTTTCTTSCCCGGGSTTSCHH-HHHHHH-HHHHCCSEEEEEEEGGGGTGGGGHHHHHHHHHHHHTT-BCCEEEEEEG
T ss_pred CCCCCCcchhcccCCCcchhhHHH-HHHHHH-HHhccCcEEEEeCcHHHHhccccHHHHHHHHHHHhCC-CEEEEEEEEH
Confidence 875421 111 1121 344444 44579987777666433322 246777777776542 2232222222
Q ss_pred cccCC---cceeEEeccc
Q 037807 216 PTYPS---GVIGFMLCST 230 (299)
Q Consensus 216 P~~~~---g~w~~~~ask 230 (299)
-.|+- -.-.|++|++
T Consensus 155 ~~~GvPQ~R~R~~iv~~~ 172 (327)
T 2c7p_A 155 LDYGIPQKRERIYMICFR 172 (327)
T ss_dssp GGGTCSBCCEEEEEEEEB
T ss_pred HHcCCCccceEEEEEEEe
Confidence 22311 2355788876
No 312
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.79 E-value=0.014 Score=51.46 Aligned_cols=109 Identities=16% Similarity=0.068 Sum_probs=72.7
Q ss_pred CCCCeEEEEeccccHHHHHHHhc-------CCccEEEEEE-----CCHH-------------------HHHHHHh-----
Q 037807 67 PNPKKVLLIGGGDGGILREISRH-------ASVEQIHICE-----IDTM-------------------LINVYKE----- 110 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~-------~~~~~v~~VE-----id~~-------------------vi~~a~~----- 110 (299)
.-|..|+++|+--|+.+..++.. ....+|.+.| ..+. ..+..++
T Consensus 68 ~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 68 DVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp TSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 45789999999999988876531 2347889988 2210 0011111
Q ss_pred -hchhhhcCCCCCCEEEEEccHHHHHHh----cCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 111 -YFPEIAIGYEDSRVILHVCDGSEYLKT----VQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 111 -~~~~~~~~~~~~rv~v~~~D~~~~l~~----~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
++... +..+++++++.+++.+.+.. .+..++|+|.+|... .. -+...|+.+...|+|||++++.-
T Consensus 148 ~~~~~~--g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~--Y~----~t~~~le~~~p~l~~GGvIv~DD 217 (257)
T 3tos_A 148 ECSDFF--GHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL--YE----PTKAVLEAIRPYLTKGSIVAFDE 217 (257)
T ss_dssp HTTSTT--TTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC--HH----HHHHHHHHHGGGEEEEEEEEESS
T ss_pred hhhhhc--CCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc--cc----hHHHHHHHHHHHhCCCcEEEEcC
Confidence 11111 11247999999999887754 234579999999732 00 14678999999999999999954
No 313
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=96.73 E-value=0.0018 Score=59.34 Aligned_cols=99 Identities=18% Similarity=0.158 Sum_probs=67.1
Q ss_pred CCCCeEEEEeccc-cHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhc-CCCCcc
Q 037807 67 PNPKKVLLIGGGD-GGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTV-QSGTFD 144 (299)
Q Consensus 67 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~~fD 144 (299)
....+||++|+|. |.++..+++..+..+|++++.+++-.+.+++.-. +.-+.....|..+.+.+. ....+|
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa-------~~vi~~~~~~~~~~v~~~t~g~g~D 237 (352)
T 3fpc_A 165 KLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGA-------TDIINYKNGDIVEQILKATDGKGVD 237 (352)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTC-------CEEECGGGSCHHHHHHHHTTTCCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCC-------ceEEcCCCcCHHHHHHHHcCCCCCC
Confidence 4568899999875 6667778887776689999999999999887421 100111113444545443 234699
Q ss_pred EEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 145 AIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 145 vIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
+|+-.... .+.++.+.+.|+++|.++.-
T Consensus 238 ~v~d~~g~----------~~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 238 KVVIAGGD----------VHTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp EEEECSSC----------TTHHHHHHHHEEEEEEEEEC
T ss_pred EEEECCCC----------hHHHHHHHHHHhcCCEEEEe
Confidence 99843322 24678899999999999864
No 314
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=96.69 E-value=0.0034 Score=58.12 Aligned_cols=100 Identities=17% Similarity=0.109 Sum_probs=67.7
Q ss_pred CCCCeEEEEeccc-cHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEE--EccHHHHHHhcCCCCc
Q 037807 67 PNPKKVLLIGGGD-GGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILH--VCDGSEYLKTVQSGTF 143 (299)
Q Consensus 67 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~--~~D~~~~l~~~~~~~f 143 (299)
....+||++|+|. |.++..+++..+..+|+++|.+++-++.+++.=. +.-+... ..|..+.+++...+.+
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa-------~~vi~~~~~~~~~~~~i~~~~~gg~ 264 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGV-------NEFVNPKDHDKPIQEVIVDLTDGGV 264 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTC-------CEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCC-------cEEEccccCchhHHHHHHHhcCCCC
Confidence 3568899999864 6667777876666689999999999999886411 0000000 1344555554434589
Q ss_pred cEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCC-cEEEEec
Q 037807 144 DAIIIDAFDPIRPGHDLFEGPFFELVAKALRPG-GAMCIQA 183 (299)
Q Consensus 144 DvIi~D~~~~~~~~~~l~t~ef~~~~~~~Lkpg-Gvlv~~~ 183 (299)
|+|+-.... .+.++.+.+.|+++ |.+++-.
T Consensus 265 D~vid~~g~----------~~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 265 DYSFECIGN----------VSVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp SEEEECSCC----------HHHHHHHHHTBCTTTCEEEECS
T ss_pred CEEEECCCC----------HHHHHHHHHHhhccCCEEEEEc
Confidence 999843221 56788999999997 9988743
No 315
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.64 E-value=0.0021 Score=58.55 Aligned_cols=67 Identities=16% Similarity=0.270 Sum_probs=50.9
Q ss_pred CCCCEEEEEccHHHHHHhcCCCCccEEEEcCCCCCCCCCC---C-------CcHHHHHHHHHhcCCCcEEEEecCCc
Q 037807 120 EDSRVILHVCDGSEYLKTVQSGTFDAIIIDAFDPIRPGHD---L-------FEGPFFELVAKALRPGGAMCIQAESL 186 (299)
Q Consensus 120 ~~~rv~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~---l-------~t~ef~~~~~~~LkpgGvlv~~~~s~ 186 (299)
...+.+++.+|..+.++..+++++|+|++|++........ . +..+.++.++++|+|||.+++..+..
T Consensus 11 ~~~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~ 87 (323)
T 1boo_A 11 TTSNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGA 87 (323)
T ss_dssp ECSSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred ecCCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCE
Confidence 4568999999999998866567999999998775432110 0 23567888899999999999977544
No 316
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=96.50 E-value=0.0069 Score=55.89 Aligned_cols=99 Identities=13% Similarity=0.047 Sum_probs=65.2
Q ss_pred CCCCeEEEEeccc-cHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEE--EccHHHHHHhcCCCCc
Q 037807 67 PNPKKVLLIGGGD-GGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILH--VCDGSEYLKTVQSGTF 143 (299)
Q Consensus 67 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~--~~D~~~~l~~~~~~~f 143 (299)
....+||++|+|. |..+..+++..+..+|++++.+++-.+.+++. .. +.-+... ..|..+.+.+...+.+
T Consensus 191 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l-Ga------~~vi~~~~~~~~~~~~~~~~~~~g~ 263 (374)
T 1cdo_A 191 EPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVF-GA------TDFVNPNDHSEPISQVLSKMTNGGV 263 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT-TC------CEEECGGGCSSCHHHHHHHHHTSCB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHh-CC------ceEEeccccchhHHHHHHHHhCCCC
Confidence 3467999999764 56677778876666899999999999988864 21 0000000 0234444443323479
Q ss_pred cEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCC-cEEEEe
Q 037807 144 DAIIIDAFDPIRPGHDLFEGPFFELVAKALRPG-GAMCIQ 182 (299)
Q Consensus 144 DvIi~D~~~~~~~~~~l~t~ef~~~~~~~Lkpg-Gvlv~~ 182 (299)
|+||-.... .+.++.+.+.|+++ |.++.-
T Consensus 264 D~vid~~g~----------~~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 264 DFSLECVGN----------VGVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp SEEEECSCC----------HHHHHHHHHTBCTTTCEEEEC
T ss_pred CEEEECCCC----------HHHHHHHHHHhhcCCcEEEEE
Confidence 999843221 45788999999999 998874
No 317
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=96.48 E-value=0.0082 Score=55.37 Aligned_cols=99 Identities=15% Similarity=0.011 Sum_probs=65.4
Q ss_pred CCCCeEEEEeccc-cHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEE--EccHHHHHHhcCCCCc
Q 037807 67 PNPKKVLLIGGGD-GGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILH--VCDGSEYLKTVQSGTF 143 (299)
Q Consensus 67 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~--~~D~~~~l~~~~~~~f 143 (299)
....+||++|+|. |..+..+++..+..+|++++.+++-.+.+++. .. +.-+... ..|..+.+.+...+.+
T Consensus 190 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l-Ga------~~vi~~~~~~~~~~~~~~~~~~~g~ 262 (374)
T 2jhf_A 190 TQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV-GA------TECVNPQDYKKPIQEVLTEMSNGGV 262 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT-TC------SEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh-CC------ceEecccccchhHHHHHHHHhCCCC
Confidence 3468999999765 56677777776666899999999999988763 21 0000000 0234444544323479
Q ss_pred cEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCC-cEEEEe
Q 037807 144 DAIIIDAFDPIRPGHDLFEGPFFELVAKALRPG-GAMCIQ 182 (299)
Q Consensus 144 DvIi~D~~~~~~~~~~l~t~ef~~~~~~~Lkpg-Gvlv~~ 182 (299)
|+|+-.... .+.++.+.+.|+++ |.+++-
T Consensus 263 D~vid~~g~----------~~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 263 DFSFEVIGR----------LDTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp SEEEECSCC----------HHHHHHHHHHBCTTTCEEEEC
T ss_pred cEEEECCCC----------HHHHHHHHHHhhcCCcEEEEe
Confidence 999843221 45788899999999 998864
No 318
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=96.48 E-value=0.007 Score=56.58 Aligned_cols=101 Identities=16% Similarity=0.131 Sum_probs=65.1
Q ss_pred CCCCeEEEEeccc-cHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhc-CCCCcc
Q 037807 67 PNPKKVLLIGGGD-GGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTV-QSGTFD 144 (299)
Q Consensus 67 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~~fD 144 (299)
....+||++|+|. |.++..+++..+..+|++++.+++-.+.+++.-... -+.....|..+.+.+. ....+|
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~-------vi~~~~~~~~~~i~~~t~g~g~D 284 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADH-------VIDPTKENFVEAVLDYTNGLGAK 284 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSE-------EECTTTSCHHHHHHHHTTTCCCS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCE-------EEcCCCCCHHHHHHHHhCCCCCC
Confidence 3567999999865 556677788777668999999999999998752110 0000013445555443 234699
Q ss_pred EEEEcCCCCCCCCCCCCcHHHHHHHHHhc----CCCcEEEEec
Q 037807 145 AIIIDAFDPIRPGHDLFEGPFFELVAKAL----RPGGAMCIQA 183 (299)
Q Consensus 145 vIi~D~~~~~~~~~~l~t~ef~~~~~~~L----kpgGvlv~~~ 183 (299)
+|+-....+ ...+..+.+.| +++|.+++-.
T Consensus 285 ~vid~~g~~---------~~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 285 LFLEATGVP---------QLVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp EEEECSSCH---------HHHHHHHHHHHHHCSCCCCEEEECS
T ss_pred EEEECCCCc---------HHHHHHHHHHHHhccCCCcEEEEeC
Confidence 998433221 23566666666 9999998743
No 319
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.47 E-value=0.0029 Score=59.02 Aligned_cols=108 Identities=11% Similarity=0.103 Sum_probs=66.7
Q ss_pred CCCCeEEEEeccc-cHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccH-HHHHHhc-CCCCc
Q 037807 67 PNPKKVLLIGGGD-GGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDG-SEYLKTV-QSGTF 143 (299)
Q Consensus 67 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~-~~~l~~~-~~~~f 143 (299)
....+||++|+|. |.++..+++..+..+|++++.+++-.+.+++. .. + -+.....|. .+.+++. ....+
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-Ga------~-~i~~~~~~~~~~~~~~~~~g~g~ 255 (398)
T 2dph_A 184 KPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDA-GF------E-TIDLRNSAPLRDQIDQILGKPEV 255 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTT-TC------E-EEETTSSSCHHHHHHHHHSSSCE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc-CC------c-EEcCCCcchHHHHHHHHhCCCCC
Confidence 3568999999876 77788888865655899999999999988864 11 0 111111232 3334332 23369
Q ss_pred cEEEEcCCCCCC---C-CCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 144 DAIIIDAFDPIR---P-GHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 144 DvIi~D~~~~~~---~-~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
|+||-....+.. + ...+-....++.+.+.|+++|.+++-
T Consensus 256 Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 256 DCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp EEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred CEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 999854332210 0 00000134688899999999998863
No 320
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=96.47 E-value=0.012 Score=53.43 Aligned_cols=100 Identities=17% Similarity=0.190 Sum_probs=68.2
Q ss_pred CCCCeEEEEeccccH-HHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhc-CCCCcc
Q 037807 67 PNPKKVLLIGGGDGG-ILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTV-QSGTFD 144 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~-~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~~fD 144 (299)
....+||++|+|+++ ++..++++....+|++++.+++-.+.+++.-. +.-+.....|..+.+.+. ....+|
T Consensus 162 ~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga-------~~~i~~~~~~~~~~v~~~t~g~g~d 234 (348)
T 4eez_A 162 KPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGA-------DVTINSGDVNPVDEIKKITGGLGVQ 234 (348)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTC-------SEEEEC-CCCHHHHHHHHTTSSCEE
T ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCC-------eEEEeCCCCCHHHHhhhhcCCCCce
Confidence 346799999998644 45555665456789999999999888887532 112333345666655544 234578
Q ss_pred EEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 145 AIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 145 vIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
+++.+... .+.+....+.|+++|.+++-.
T Consensus 235 ~~~~~~~~----------~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 235 SAIVCAVA----------RIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp EEEECCSC----------HHHHHHHHHTEEEEEEEEECC
T ss_pred EEEEeccC----------cchhheeheeecCCceEEEEe
Confidence 88766433 567888999999999988743
No 321
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=96.47 E-value=0.0066 Score=55.96 Aligned_cols=96 Identities=13% Similarity=-0.082 Sum_probs=65.3
Q ss_pred CCCCeEEEEeccc-cHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEE-----ccHHHHHHhcCC
Q 037807 67 PNPKKVLLIGGGD-GGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHV-----CDGSEYLKTVQS 140 (299)
Q Consensus 67 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~-----~D~~~~l~~~~~ 140 (299)
....+||++|+|. |..+..+++..+..+|++++.+++-.+.+++. .. + .++. .|..+.+.+...
T Consensus 190 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-Ga------~---~vi~~~~~~~~~~~~i~~~t~ 259 (373)
T 1p0f_A 190 TPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIEL-GA------T---ECLNPKDYDKPIYEVICEKTN 259 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHT-TC------S---EEECGGGCSSCHHHHHHHHTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc-CC------c---EEEecccccchHHHHHHHHhC
Confidence 3568999999765 55667777765656899999999999988863 21 1 1111 234444544323
Q ss_pred CCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCC-cEEEEe
Q 037807 141 GTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPG-GAMCIQ 182 (299)
Q Consensus 141 ~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~Lkpg-Gvlv~~ 182 (299)
+.+|+|+--... .+.++.+.+.|+++ |.++.-
T Consensus 260 gg~Dvvid~~g~----------~~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 260 GGVDYAVECAGR----------IETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp SCBSEEEECSCC----------HHHHHHHHHTBCTTTCEEEEC
T ss_pred CCCCEEEECCCC----------HHHHHHHHHHHhcCCCEEEEE
Confidence 479999843221 46788999999999 998864
No 322
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=96.45 E-value=0.0074 Score=55.70 Aligned_cols=100 Identities=12% Similarity=0.007 Sum_probs=65.6
Q ss_pred CCCCeEEEEeccc-cHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEE--EccHHHHHHhcCCCCc
Q 037807 67 PNPKKVLLIGGGD-GGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILH--VCDGSEYLKTVQSGTF 143 (299)
Q Consensus 67 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~--~~D~~~~l~~~~~~~f 143 (299)
....+||++|+|. |.++..+++..+..+|++++.+++-.+.+++.-. +.-+... ..|..+.+.+...+.+
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa-------~~vi~~~~~~~~~~~~v~~~~~~g~ 266 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGA-------TDCLNPRELDKPVQDVITELTAGGV 266 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC-------SEEECGGGCSSCHHHHHHHHHTSCB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC-------cEEEccccccchHHHHHHHHhCCCc
Confidence 3468999999764 5566777887666689999999999998876411 0000000 0234444443323479
Q ss_pred cEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCC-cEEEEec
Q 037807 144 DAIIIDAFDPIRPGHDLFEGPFFELVAKALRPG-GAMCIQA 183 (299)
Q Consensus 144 DvIi~D~~~~~~~~~~l~t~ef~~~~~~~Lkpg-Gvlv~~~ 183 (299)
|+|+-.... .+.++.+.+.|+++ |.+++-.
T Consensus 267 Dvvid~~G~----------~~~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 267 DYSLDCAGT----------AQTLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp SEEEESSCC----------HHHHHHHHHTBCTTTCEEEECC
T ss_pred cEEEECCCC----------HHHHHHHHHHhhcCCCEEEEEC
Confidence 999843221 46788999999999 9988643
No 323
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=96.45 E-value=0.01 Score=54.24 Aligned_cols=99 Identities=13% Similarity=0.128 Sum_probs=64.0
Q ss_pred CCCCeEEEEeccc-cHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEE-ccHHHHHHh-cC---C
Q 037807 67 PNPKKVLLIGGGD-GGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHV-CDGSEYLKT-VQ---S 140 (299)
Q Consensus 67 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~-~D~~~~l~~-~~---~ 140 (299)
....+||++|+|. |..+..+++..+. +|++++.+++-.+.+++.-. +.-+.... .|..+-+.+ .. .
T Consensus 167 ~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa-------~~~~~~~~~~~~~~~i~~~~~~~~g 238 (352)
T 1e3j_A 167 QLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGA-------DVTLVVDPAKEEESSIIERIRSAIG 238 (352)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTC-------SEEEECCTTTSCHHHHHHHHHHHSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCC-------CEEEcCcccccHHHHHHHHhccccC
Confidence 3568999999865 5667777776665 49999999999998886421 10011110 233333332 21 2
Q ss_pred CCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 141 GTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 141 ~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
+.+|+|+-.... ...++.+.+.|+++|.++.-.
T Consensus 239 ~g~D~vid~~g~----------~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 239 DLPNVTIDCSGN----------EKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp SCCSEEEECSCC----------HHHHHHHHHHSCTTCEEEECS
T ss_pred CCCCEEEECCCC----------HHHHHHHHHHHhcCCEEEEEe
Confidence 569999844321 456788899999999998743
No 324
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=96.43 E-value=0.0093 Score=54.31 Aligned_cols=98 Identities=13% Similarity=0.157 Sum_probs=66.1
Q ss_pred CCCCeEEEEeccc-cHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhc-CCCCcc
Q 037807 67 PNPKKVLLIGGGD-GGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTV-QSGTFD 144 (299)
Q Consensus 67 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~~fD 144 (299)
....+||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-. +.-+. ...|..+.+.+. ....+|
T Consensus 170 ~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa-------~~~i~-~~~~~~~~v~~~t~g~g~d 241 (345)
T 3jv7_A 170 GPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGA-------DAAVK-SGAGAADAIRELTGGQGAT 241 (345)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTC-------SEEEE-CSTTHHHHHHHHHGGGCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCC-------CEEEc-CCCcHHHHHHHHhCCCCCe
Confidence 4568999999865 6677777876545789999999999999987421 11111 112334444332 234799
Q ss_pred EEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 145 AIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 145 vIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
+|+-.... .+.++.+.+.|+++|.+++-
T Consensus 242 ~v~d~~G~----------~~~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 242 AVFDFVGA----------QSTIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp EEEESSCC----------HHHHHHHHHHEEEEEEEEEC
T ss_pred EEEECCCC----------HHHHHHHHHHHhcCCEEEEE
Confidence 98843221 55789999999999999874
No 325
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=96.38 E-value=0.008 Score=55.35 Aligned_cols=99 Identities=15% Similarity=0.050 Sum_probs=65.1
Q ss_pred CCCCeEEEEeccc-cHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEE--EccHHHHHHhcCCCCc
Q 037807 67 PNPKKVLLIGGGD-GGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILH--VCDGSEYLKTVQSGTF 143 (299)
Q Consensus 67 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~--~~D~~~~l~~~~~~~f 143 (299)
....+||++|+|. |.++..+++..+..+|++++.+++-.+.+++.-. +.-+... ..|..+.+++...+.+
T Consensus 189 ~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa-------~~vi~~~~~~~~~~~~v~~~~~~g~ 261 (373)
T 2fzw_A 189 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGA-------TECINPQDFSKPIQEVLIEMTDGGV 261 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTC-------SEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCC-------ceEeccccccccHHHHHHHHhCCCC
Confidence 3467999999765 5566677776565589999999999998886411 0000000 0234444544323479
Q ss_pred cEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCC-cEEEEe
Q 037807 144 DAIIIDAFDPIRPGHDLFEGPFFELVAKALRPG-GAMCIQ 182 (299)
Q Consensus 144 DvIi~D~~~~~~~~~~l~t~ef~~~~~~~Lkpg-Gvlv~~ 182 (299)
|+|+-.... .+.++.+.+.|+++ |.+++-
T Consensus 262 D~vid~~g~----------~~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 262 DYSFECIGN----------VKVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp SEEEECSCC----------HHHHHHHHHTBCTTTCEEEEC
T ss_pred CEEEECCCc----------HHHHHHHHHhhccCCcEEEEE
Confidence 999843221 45688899999999 998874
No 326
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=96.37 E-value=0.014 Score=52.98 Aligned_cols=100 Identities=13% Similarity=0.126 Sum_probs=66.0
Q ss_pred CCCCeEEEEeccc-cHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhc-CCCCcc
Q 037807 67 PNPKKVLLIGGGD-GGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTV-QSGTFD 144 (299)
Q Consensus 67 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~~fD 144 (299)
....+||+.|+|. |.++..+++..+...+++++.+++-.+.+++.=. +.-+.....|..+.++.. ....+|
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa-------~~~i~~~~~~~~~~~~~~~~~~g~d 231 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGA-------MQTFNSSEMSAPQMQSVLRELRFNQ 231 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC-------SEEEETTTSCHHHHHHHHGGGCSSE
T ss_pred CCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCC-------eEEEeCCCCCHHHHHHhhcccCCcc
Confidence 4568999999875 3455667777777788999999999999987521 111111123444444432 134577
Q ss_pred EEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 145 AIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 145 vIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
+|+-.... .+.++.+.+.|+++|.+++-.
T Consensus 232 ~v~d~~G~----------~~~~~~~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 232 LILETAGV----------PQTVELAVEIAGPHAQLALVG 260 (346)
T ss_dssp EEEECSCS----------HHHHHHHHHHCCTTCEEEECC
T ss_pred cccccccc----------cchhhhhhheecCCeEEEEEe
Confidence 77643221 567888999999999998754
No 327
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.34 E-value=0.0052 Score=57.28 Aligned_cols=121 Identities=18% Similarity=0.101 Sum_probs=79.7
Q ss_pred CeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhc------CCCCc
Q 037807 70 KKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTV------QSGTF 143 (299)
Q Consensus 70 ~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~------~~~~f 143 (299)
.+|++|-||.|++...+.+. +...|.+||+|+..++..+.+++ ...++.+|..++..+. ....+
T Consensus 3 ~~vidLFsG~GGlslG~~~a-G~~~v~avE~d~~a~~t~~~N~~---------~~~~~~~DI~~~~~~~~~~~~~~~~~~ 72 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA-GFDVKMAVEIDQHAINTHAINFP---------RSLHVQEDVSLLNAEIIKGFFKNDMPI 72 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH-TCEEEEEECSCHHHHHHHHHHCT---------TSEEECCCGGGCCHHHHHHHHCSCCCC
T ss_pred CeEEEEccCcCHHHHHHHHC-CCcEEEEEeCCHHHHHHHHHhCC---------CCceEecChhhcCHHHHHhhcccCCCe
Confidence 47999999999999998876 46778899999999999998874 3467778876542210 24679
Q ss_pred cEEEEcCCCCC-CCCC---------CCCcHHHHHHHHHhcCCCcEEEEecCCccc--chHHHHHHHHHHhhh
Q 037807 144 DAIIIDAFDPI-RPGH---------DLFEGPFFELVAKALRPGGAMCIQAESLWF--QQFSVQHLIDDCHRI 203 (299)
Q Consensus 144 DvIi~D~~~~~-~~~~---------~l~t~ef~~~~~~~LkpgGvlv~~~~s~~~--~~~~~~~~~~~l~~~ 203 (299)
|+|+.+++... +.+. .|+ .+|++ +.+.++|.-+++=|+..... ....+..++ .|.+.
T Consensus 73 D~i~ggpPCQ~fS~ag~~~~~d~r~~L~-~~~~~-~v~~~~P~~~v~ENV~gl~s~~~~~~~~~i~-~l~~~ 141 (376)
T 3g7u_A 73 DGIIGGPPCQGFSSIGKGNPDDSRNQLY-MHFYR-LVSELQPLFFLAENVPGIMQEKYSGIRNKAF-NLVSG 141 (376)
T ss_dssp CEEEECCCCCTTC-------CHHHHHHH-HHHHH-HHHHHCCSEEEEEECTTTTCGGGHHHHHHHH-HHHHT
T ss_pred eEEEecCCCCCcccccCCCCCCchHHHH-HHHHH-HHHHhCCCEEEEecchHhhccCcHHHHHHHH-HHHcC
Confidence 99999876432 1110 111 23333 44567998777766644332 223566666 66543
No 328
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.32 E-value=0.025 Score=44.52 Aligned_cols=97 Identities=18% Similarity=0.181 Sum_probs=61.2
Q ss_pred CCeEEEEeccc-cHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHH--HHHHhcCCCCccE
Q 037807 69 PKKVLLIGGGD-GGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGS--EYLKTVQSGTFDA 145 (299)
Q Consensus 69 ~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~--~~l~~~~~~~fDv 145 (299)
..+|+++|+|. |......++..+ .+|+++|.|++.++.+++ ..+.++.+|+. +.+++..-...|+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g-~~v~vid~~~~~~~~~~~-----------~g~~~i~gd~~~~~~l~~a~i~~ad~ 74 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASD-IPLVVIETSRTRVDELRE-----------RGVRAVLGNAANEEIMQLAHLECAKW 74 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTT-CCEEEEESCHHHHHHHHH-----------TTCEEEESCTTSHHHHHHTTGGGCSE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCC-CCEEEEECCHHHHHHHHH-----------cCCCEEECCCCCHHHHHhcCcccCCE
Confidence 46799999975 222222233223 479999999998887764 24577888874 3455432357999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecC
Q 037807 146 IIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAE 184 (299)
Q Consensus 146 Ii~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~ 184 (299)
|++-.++.. .....-...+.+.|+..++....
T Consensus 75 vi~~~~~~~-------~n~~~~~~a~~~~~~~~iiar~~ 106 (140)
T 3fwz_A 75 LILTIPNGY-------EAGEIVASARAKNPDIEIIARAH 106 (140)
T ss_dssp EEECCSCHH-------HHHHHHHHHHHHCSSSEEEEEES
T ss_pred EEEECCChH-------HHHHHHHHHHHHCCCCeEEEEEC
Confidence 998765531 01223345667888887776543
No 329
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.32 E-value=0.02 Score=53.16 Aligned_cols=108 Identities=12% Similarity=0.069 Sum_probs=67.1
Q ss_pred CCCCeEEEEeccc-cHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEcc-HHHHHHhc-CCCCc
Q 037807 67 PNPKKVLLIGGGD-GGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCD-GSEYLKTV-QSGTF 143 (299)
Q Consensus 67 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D-~~~~l~~~-~~~~f 143 (299)
....+||++|+|. |.++..+++..+..+|+++|.+++-++.+++. .. + -+.....| ..+.+++. ....+
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~l-Ga------~-~i~~~~~~~~~~~v~~~t~g~g~ 255 (398)
T 1kol_A 184 GPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ-GF------E-IADLSLDTPLHEQIAALLGEPEV 255 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT-TC------E-EEETTSSSCHHHHHHHHHSSSCE
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHc-CC------c-EEccCCcchHHHHHHHHhCCCCC
Confidence 3568999999766 66777888876766899999999999999764 10 0 01110112 33444432 23479
Q ss_pred cEEEEcCCCCCC-C----CCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 144 DAIIIDAFDPIR-P----GHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 144 DvIi~D~~~~~~-~----~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
|+||-....+.. . .........++.+.+.|+++|.+++-
T Consensus 256 Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 256 DCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp EEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEEC
T ss_pred CEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEe
Confidence 999854332210 0 00001134688899999999998864
No 330
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=96.28 E-value=0.012 Score=53.91 Aligned_cols=94 Identities=15% Similarity=0.109 Sum_probs=62.8
Q ss_pred CeEEEEeccc-cHHH-HHHH-hcCCccEEEEEECCHH---HHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCc
Q 037807 70 KKVLLIGGGD-GGIL-REIS-RHASVEQIHICEIDTM---LINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTF 143 (299)
Q Consensus 70 ~~VL~IG~G~-G~~~-~~l~-~~~~~~~v~~VEid~~---vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~f 143 (299)
.+||++|+|. |.++ ..++ +..+..+|++++.+++ -.+.+++.-.. .+.....|..+ +.+. .+.+
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~--------~v~~~~~~~~~-i~~~-~gg~ 243 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDAT--------YVDSRQTPVED-VPDV-YEQM 243 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCE--------EEETTTSCGGG-HHHH-SCCE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCc--------ccCCCccCHHH-HHHh-CCCC
Confidence 8999999754 5566 7788 7766656999999988 88888763110 11001124444 4443 3479
Q ss_pred cEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 144 DAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 144 DvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
|+|+-.... ...++.+.+.|+++|.++.-.
T Consensus 244 Dvvid~~g~----------~~~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 244 DFIYEATGF----------PKHAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp EEEEECSCC----------HHHHHHHHHHEEEEEEEEECC
T ss_pred CEEEECCCC----------hHHHHHHHHHHhcCCEEEEEe
Confidence 999843221 456888999999999988743
No 331
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.26 E-value=0.0062 Score=54.61 Aligned_cols=67 Identities=21% Similarity=0.228 Sum_probs=46.9
Q ss_pred CCCCEEEEEccHHHHHHhcCCCCccEEEEcCCCCCCCC-----CCC--------C---cHHHHHHHHHhcCCCcEEEEec
Q 037807 120 EDSRVILHVCDGSEYLKTVQSGTFDAIIIDAFDPIRPG-----HDL--------F---EGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 120 ~~~rv~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~-----~~l--------~---t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
...+++++++|..++++..++++||+|++|++...... ..+ + -.++++.+.++|+|||.+++..
T Consensus 18 ~~~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~ 97 (297)
T 2zig_A 18 SFGVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVV 97 (297)
T ss_dssp ---CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 34578999999999987665689999999987643211 000 0 1346678899999999998876
Q ss_pred CCc
Q 037807 184 ESL 186 (299)
Q Consensus 184 ~s~ 186 (299)
+..
T Consensus 98 ~d~ 100 (297)
T 2zig_A 98 GDV 100 (297)
T ss_dssp CCE
T ss_pred CCC
Confidence 543
No 332
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=96.23 E-value=0.0044 Score=56.43 Aligned_cols=66 Identities=20% Similarity=0.254 Sum_probs=49.5
Q ss_pred CCCEEEE-EccHHHHHHhcCCCCccEEEEcCCCCCCCC----CCC---CcHHHHHHHHHhcCCCcEEEEecCCc
Q 037807 121 DSRVILH-VCDGSEYLKTVQSGTFDAIIIDAFDPIRPG----HDL---FEGPFFELVAKALRPGGAMCIQAESL 186 (299)
Q Consensus 121 ~~rv~v~-~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~----~~l---~t~ef~~~~~~~LkpgGvlv~~~~s~ 186 (299)
+...+++ .+|+.++++..+++++|+|++|++...+.. ..- +..+.+..++++|+|||.+++.....
T Consensus 36 ~~~~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~~ 109 (319)
T 1eg2_A 36 GTTRHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGLQ 109 (319)
T ss_dssp CCEEEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECSC
T ss_pred cccceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCcc
Confidence 4457888 999999998776678999999998754310 001 23567788899999999999977543
No 333
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=96.16 E-value=0.049 Score=50.19 Aligned_cols=99 Identities=23% Similarity=0.338 Sum_probs=59.0
Q ss_pred CCCeEEEEeccccH-HHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 68 NPKKVLLIGGGDGG-ILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 68 ~~~~VL~IG~G~G~-~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
++++||++|+|.=+ .+..+++..+. +|+++|.+++-.+.+++.+.. .+..+..+..++.+.. ..+|+|
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~--------~~~~~~~~~~~~~~~~--~~~DvV 234 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGS--------RVELLYSNSAEIETAV--AEADLL 234 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGG--------GSEEEECCHHHHHHHH--HTCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCc--------eeEeeeCCHHHHHHHH--cCCCEE
Confidence 35899999985322 23334455555 899999999988887765432 2333333322332222 358999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEE
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCI 181 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~ 181 (299)
|.....+......+.+. ...+.|+++|+++.
T Consensus 235 I~~~~~~~~~~~~li~~----~~~~~~~~g~~ivd 265 (361)
T 1pjc_A 235 IGAVLVPGRRAPILVPA----SLVEQMRTGSVIVD 265 (361)
T ss_dssp EECCCCTTSSCCCCBCH----HHHTTSCTTCEEEE
T ss_pred EECCCcCCCCCCeecCH----HHHhhCCCCCEEEE
Confidence 87554443333344444 34567899998875
No 334
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.05 E-value=0.0051 Score=54.09 Aligned_cols=61 Identities=16% Similarity=0.267 Sum_probs=46.3
Q ss_pred CEEEEEccHHHHHHhcCCCCccEEEEcCCCCCCCC--CCC--------CcHHHHHHHHHhcCCCcEEEEec
Q 037807 123 RVILHVCDGSEYLKTVQSGTFDAIIIDAFDPIRPG--HDL--------FEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 123 rv~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~--~~l--------~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
..+++.+|+.++++..+++++|+|++|++...+.. ... +..+.++.++++|+|||.+++..
T Consensus 4 ~~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 4 INKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp SSSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCeEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 45689999999998776679999999998754411 111 23567788899999999998864
No 335
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=96.01 E-value=0.01 Score=54.93 Aligned_cols=96 Identities=18% Similarity=0.156 Sum_probs=63.6
Q ss_pred CCCCeEEEEeccc-cHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEE------ccHHHHHHhcC
Q 037807 67 PNPKKVLLIGGGD-GGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHV------CDGSEYLKTVQ 139 (299)
Q Consensus 67 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~------~D~~~~l~~~~ 139 (299)
....+||++|+|. |..+..+++..+..+|++++.+++-.+.+++. .. + .++. .|..+.+.+..
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l-Ga------~---~vi~~~~~~~~~~~~~v~~~~ 263 (380)
T 1vj0_A 194 FAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEI-GA------D---LTLNRRETSVEERRKAIMDIT 263 (380)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHT-TC------S---EEEETTTSCHHHHHHHHHHHT
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHc-CC------c---EEEeccccCcchHHHHHHHHh
Confidence 3468999999553 55667777776656899999999999988863 21 1 1222 23333343331
Q ss_pred -CCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 140 -SGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 140 -~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
...+|+|+-.... .+.++.+.+.|+++|.++.-
T Consensus 264 ~g~g~Dvvid~~g~----------~~~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 264 HGRGADFILEATGD----------SRALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp TTSCEEEEEECSSC----------TTHHHHHHHHEEEEEEEEEC
T ss_pred CCCCCcEEEECCCC----------HHHHHHHHHHHhcCCEEEEE
Confidence 2369999844322 23578888999999998874
No 336
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=96.00 E-value=0.0097 Score=54.30 Aligned_cols=98 Identities=14% Similarity=0.139 Sum_probs=64.5
Q ss_pred CCCeEEEEeccc-cHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhc-CCCCccE
Q 037807 68 NPKKVLLIGGGD-GGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTV-QSGTFDA 145 (299)
Q Consensus 68 ~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~~fDv 145 (299)
...+||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-... -+.....|..+.+.+. ....+|+
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~-------~~~~~~~~~~~~v~~~~~g~g~D~ 239 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADY-------VINPFEEDVVKEVMDITDGNGVDV 239 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSE-------EECTTTSCHHHHHHHHTTTSCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCE-------EECCCCcCHHHHHHHHcCCCCCCE
Confidence 567899999854 556667777666558999999999988887642100 0000012444444433 1346999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 146 IIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 146 Ii~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
|+-.... .+.++.+.+.|+++|.++.-
T Consensus 240 vid~~g~----------~~~~~~~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 240 FLEFSGA----------PKALEQGLQAVTPAGRVSLL 266 (348)
T ss_dssp EEECSCC----------HHHHHHHHHHEEEEEEEEEC
T ss_pred EEECCCC----------HHHHHHHHHHHhcCCEEEEE
Confidence 9854321 46788899999999998864
No 337
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=96.00 E-value=0.0042 Score=56.65 Aligned_cols=98 Identities=18% Similarity=0.210 Sum_probs=64.0
Q ss_pred CCCeEEEEeccc-cHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 68 NPKKVLLIGGGD-GGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 68 ~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
...+||++|+|. |..+..+++..+..+|++++.+++-.+.+++. ... .++ .+ ..|..+.+.+...+.+|+|
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~--v~~-~~----~~~~~~~~~~~~~~g~D~v 235 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADR--LVN-PL----EEDLLEVVRRVTGSGVEVL 235 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSE--EEC-TT----TSCHHHHHHHHHSSCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHh--ccC-cC----ccCHHHHHHHhcCCCCCEE
Confidence 567899999754 56667777766655899999999888877664 211 000 00 1244444443224569999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
+-.... .+.++.+.+.|+++|.++.-.
T Consensus 236 id~~g~----------~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 236 LEFSGN----------EAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp EECSCC----------HHHHHHHHHHEEEEEEEEECC
T ss_pred EECCCC----------HHHHHHHHHHHhcCCEEEEEe
Confidence 844321 456888999999999988643
No 338
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.94 E-value=0.032 Score=51.39 Aligned_cols=94 Identities=16% Similarity=0.176 Sum_probs=62.7
Q ss_pred CCCCeEEEEeccc-cHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccE
Q 037807 67 PNPKKVLLIGGGD-GGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDA 145 (299)
Q Consensus 67 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDv 145 (299)
....+||++|+|. |.++..+++..+. +|++++.+++-.+.+++. .. + .++..+-.+++++. .+.+|+
T Consensus 193 ~~g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a~~l-Ga------~---~vi~~~~~~~~~~~-~~g~Dv 260 (369)
T 1uuf_A 193 GPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKAL-GA------D---EVVNSRNADEMAAH-LKSFDF 260 (369)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHH-TC------S---EEEETTCHHHHHTT-TTCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc-CC------c---EEeccccHHHHHHh-hcCCCE
Confidence 3568999999875 6667778887655 599999999999988863 21 1 12222112344443 357999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 146 IIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 146 Ii~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
|+-....+ ..++.+.+.|+++|.++.-
T Consensus 261 vid~~g~~----------~~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 261 ILNTVAAP----------HNLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp EEECCSSC----------CCHHHHHTTEEEEEEEEEC
T ss_pred EEECCCCH----------HHHHHHHHHhccCCEEEEe
Confidence 98543221 1356788999999998864
No 339
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=95.92 E-value=0.0086 Score=52.62 Aligned_cols=46 Identities=13% Similarity=0.083 Sum_probs=40.6
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchh
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPE 114 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~ 114 (299)
.+...|||..||+|.++.++.+.. .+++++|+++..++.+++++..
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~g--r~~ig~e~~~~~~~~~~~r~~~ 256 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKLG--RNFIGCDMNAEYVNQANFVLNQ 256 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHC
T ss_pred CCCCEEEECCCCCCHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHHHh
Confidence 456789999999999999998874 6899999999999999998764
No 340
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=95.90 E-value=0.018 Score=52.92 Aligned_cols=97 Identities=14% Similarity=0.184 Sum_probs=64.0
Q ss_pred CCCeEEEEe--ccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccE
Q 037807 68 NPKKVLLIG--GGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDA 145 (299)
Q Consensus 68 ~~~~VL~IG--~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDv 145 (299)
...+||++| +|-|.++..+++.....+|++++.+++-.+.+++. .... .++ . ..|..+-+.+...+.+|+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~l-Gad~-vi~-~-----~~~~~~~v~~~~~~g~Dv 242 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSL-GAHH-VID-H-----SKPLAAEVAALGLGAPAF 242 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHT-TCSE-EEC-T-----TSCHHHHHHTTCSCCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHc-CCCE-EEe-C-----CCCHHHHHHHhcCCCceE
Confidence 346899998 34467777888852236899999999999988873 2100 000 1 124444455443467998
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 146 IIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 146 Ii~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
|+-... ..+.++.+.+.|+++|.+++-
T Consensus 243 vid~~g----------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 243 VFSTTH----------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEECSC----------HHHHHHHHHHHSCTTCEEEEC
T ss_pred EEECCC----------chhhHHHHHHHhcCCCEEEEE
Confidence 874321 145788999999999999874
No 341
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=95.88 E-value=0.013 Score=53.03 Aligned_cols=98 Identities=14% Similarity=0.092 Sum_probs=64.9
Q ss_pred CCCCeEEEEec--cccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCcc
Q 037807 67 PNPKKVLLIGG--GDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFD 144 (299)
Q Consensus 67 ~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fD 144 (299)
...++||++|+ |-|..+..+++..+. +|++++.+++-.+.+.+.+.. +.-+.....|..+.+.+...+.+|
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~------~~~~~~~~~~~~~~~~~~~~~~~d 220 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFLVEELGF------DGAIDYKNEDLAAGLKRECPKGID 220 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCC------SEEEETTTSCHHHHHHHHCTTCEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCC------CEEEECCCHHHHHHHHHhcCCCce
Confidence 45689999997 456677777776665 899999999988888333321 101111113445555443345799
Q ss_pred EEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 145 AIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 145 vIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
+|+-... .+.++.+.+.|+++|.++.-
T Consensus 221 ~vi~~~g-----------~~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 221 VFFDNVG-----------GEILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp EEEESSC-----------HHHHHHHHTTEEEEEEEEEC
T ss_pred EEEECCC-----------cchHHHHHHHHhhCCEEEEE
Confidence 9885332 34688889999999999874
No 342
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.80 E-value=0.011 Score=49.29 Aligned_cols=97 Identities=13% Similarity=0.096 Sum_probs=60.0
Q ss_pred CCCCeEEEEec--cccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhc-CCCCc
Q 037807 67 PNPKKVLLIGG--GDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTV-QSGTF 143 (299)
Q Consensus 67 ~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~~f 143 (299)
...++||++|+ |-|..+..+++..+ .+|++++.+++..+.+++. .. +..+.....|..+.+.+. ..+.+
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G-~~V~~~~~~~~~~~~~~~~-g~------~~~~d~~~~~~~~~~~~~~~~~~~ 108 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMIG-ARIYTTAGSDAKREMLSRL-GV------EYVGDSRSVDFADEILELTDGYGV 108 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHTT-CC------SEEEETTCSTHHHHHHHHTTTCCE
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHc-CC------CEEeeCCcHHHHHHHHHHhCCCCC
Confidence 35678999994 44555555665444 4799999999988877653 10 111111112333333332 13469
Q ss_pred cEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 144 DAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 144 DvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
|+|+.... .+.++.+.+.|+++|.++.-
T Consensus 109 D~vi~~~g-----------~~~~~~~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 109 DVVLNSLA-----------GEAIQRGVQILAPGGRFIEL 136 (198)
T ss_dssp EEEEECCC-----------THHHHHHHHTEEEEEEEEEC
T ss_pred eEEEECCc-----------hHHHHHHHHHhccCCEEEEE
Confidence 99995431 24678889999999998863
No 343
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.79 E-value=0.016 Score=52.65 Aligned_cols=97 Identities=21% Similarity=0.304 Sum_probs=63.6
Q ss_pred CCCCeEEEEeccc-cHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccE
Q 037807 67 PNPKKVLLIGGGD-GGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDA 145 (299)
Q Consensus 67 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDv 145 (299)
....+||++|+|+ |..+..+++..+. +|++++.+++-.+.+++. .. +.-+.....|..+.+.+.. +.+|+
T Consensus 163 ~~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~l-Ga------~~~~d~~~~~~~~~~~~~~-~~~d~ 233 (339)
T 1rjw_A 163 KPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKEL-GA------DLVVNPLKEDAAKFMKEKV-GGVHA 233 (339)
T ss_dssp CTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT-TC------SEEECTTTSCHHHHHHHHH-SSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHC-CC------CEEecCCCccHHHHHHHHh-CCCCE
Confidence 3568999999853 5666677776654 899999999999988763 21 0000000123334443332 57999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 146 IIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 146 Ii~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
|+-.... .+.++.+.+.|+++|.++.-
T Consensus 234 vid~~g~----------~~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 234 AVVTAVS----------KPAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp EEESSCC----------HHHHHHHHHHEEEEEEEEEC
T ss_pred EEECCCC----------HHHHHHHHHHhhcCCEEEEe
Confidence 9854321 45688889999999998864
No 344
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=95.71 E-value=0.029 Score=51.04 Aligned_cols=94 Identities=13% Similarity=0.003 Sum_probs=61.8
Q ss_pred CCCeEEEEeccc-cHHHHHHHhcC--CccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccH-HHHHHhcC-CCC
Q 037807 68 NPKKVLLIGGGD-GGILREISRHA--SVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDG-SEYLKTVQ-SGT 142 (299)
Q Consensus 68 ~~~~VL~IG~G~-G~~~~~l~~~~--~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~-~~~l~~~~-~~~ 142 (299)
...+||++|+|. |..+..+++.. +. +|++++.+++-.+.+++. .. + .++..+- .+++.+.. ...
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~l-Ga------~---~vi~~~~~~~~~~~~~~g~g 238 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNI-TIVGISRSKKHRDFALEL-GA------D---YVSEMKDAESLINKLTDGLG 238 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHHH-TC------S---EEECHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCC-EEEEEeCCHHHHHHHHHh-CC------C---EEeccccchHHHHHhhcCCC
Confidence 567999999864 55667777754 54 699999999999988863 21 1 1121111 12333221 347
Q ss_pred ccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 143 FDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 143 fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
+|+|+-.... .+.++.+.+.|+++|.++.-
T Consensus 239 ~D~vid~~g~----------~~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 239 ASIAIDLVGT----------EETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp EEEEEESSCC----------HHHHHHHHHHEEEEEEEEEC
T ss_pred ccEEEECCCC----------hHHHHHHHHHhhcCCEEEEe
Confidence 9999844321 45688899999999998864
No 345
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.69 E-value=0.017 Score=53.12 Aligned_cols=95 Identities=15% Similarity=0.062 Sum_probs=63.7
Q ss_pred CCCCeEEEEeccc-cHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEE---ccHHHHHHhc-CCC
Q 037807 67 PNPKKVLLIGGGD-GGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHV---CDGSEYLKTV-QSG 141 (299)
Q Consensus 67 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~---~D~~~~l~~~-~~~ 141 (299)
....+||++|+|. |..+..+++..+. +|++++.+++-.+.+++.-. + .++. .|..+.+.+. ...
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa-------~---~vi~~~~~~~~~~v~~~~~g~ 256 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFALGA-------D---HGINRLEEDWVERVYALTGDR 256 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTC-------S---EEEETTTSCHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhHHHHHHcCC-------C---EEEcCCcccHHHHHHHHhCCC
Confidence 3468999999765 6667777787665 89999999999998877421 1 1122 2344444432 234
Q ss_pred CccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 142 TFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 142 ~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
.+|+|+-... . +.++.+.+.|+++|.+++-.
T Consensus 257 g~D~vid~~g-~----------~~~~~~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 257 GADHILEIAG-G----------AGLGQSLKAVAPDGRISVIG 287 (363)
T ss_dssp CEEEEEEETT-S----------SCHHHHHHHEEEEEEEEEEC
T ss_pred CceEEEECCC-h----------HHHHHHHHHhhcCCEEEEEe
Confidence 7999985433 1 12677888999999988743
No 346
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=95.60 E-value=0.11 Score=48.22 Aligned_cols=97 Identities=18% Similarity=0.259 Sum_probs=57.4
Q ss_pred CCCeEEEEeccccHHHHH---HHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCcc
Q 037807 68 NPKKVLLIGGGDGGILRE---ISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFD 144 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~---l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fD 144 (299)
.+++|+++|+| .+++. .++..+. +|+++|.+++-++.+++.+.. .+.+...+..++.+.. ...|
T Consensus 167 ~g~~V~ViG~G--~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~--------~~~~~~~~~~~l~~~l--~~aD 233 (377)
T 2vhw_A 167 EPADVVVIGAG--TAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEFCG--------RIHTRYSSAYELEGAV--KRAD 233 (377)
T ss_dssp CCCEEEEECCS--HHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTT--------SSEEEECCHHHHHHHH--HHCS
T ss_pred CCCEEEEECCC--HHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhcCC--------eeEeccCCHHHHHHHH--cCCC
Confidence 46899999985 44443 3444454 899999999988877765431 1222222222221111 3579
Q ss_pred EEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEE
Q 037807 145 AIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCI 181 (299)
Q Consensus 145 vIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~ 181 (299)
+||.....|......+.+.+ ..+.|++||+++.
T Consensus 234 vVi~~~~~p~~~t~~li~~~----~l~~mk~g~~iV~ 266 (377)
T 2vhw_A 234 LVIGAVLVPGAKAPKLVSNS----LVAHMKPGAVLVD 266 (377)
T ss_dssp EEEECCCCTTSCCCCCBCHH----HHTTSCTTCEEEE
T ss_pred EEEECCCcCCCCCcceecHH----HHhcCCCCcEEEE
Confidence 99985544432233444444 4567899998875
No 347
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=95.55 E-value=0.028 Score=50.71 Aligned_cols=97 Identities=16% Similarity=0.184 Sum_probs=62.3
Q ss_pred CCCCeEEEEec--cccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEE-ccHHHHHHhcCCCCc
Q 037807 67 PNPKKVLLIGG--GDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHV-CDGSEYLKTVQSGTF 143 (299)
Q Consensus 67 ~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~-~D~~~~l~~~~~~~f 143 (299)
...++||+.|+ |-|..+..+++..+. +|++++.+++-.+.+++. .. +.-+.... .|..+.+.+...+.+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~~-g~------~~~~d~~~~~~~~~~~~~~~~~~~ 215 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQI-GF------DAAFNYKTVNSLEEALKKASPDGY 215 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT-TC------SEEEETTSCSCHHHHHHHHCTTCE
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhc-CC------cEEEecCCHHHHHHHHHHHhCCCC
Confidence 34688999996 455556666665554 899999999988888543 21 10111111 344445544323579
Q ss_pred cEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 144 DAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 144 DvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
|+|+.... .+.++.+.+.|+++|.+++-
T Consensus 216 d~vi~~~g-----------~~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 216 DCYFDNVG-----------GEFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp EEEEESSC-----------HHHHHHHHTTEEEEEEEEEC
T ss_pred eEEEECCC-----------hHHHHHHHHHHhcCCEEEEE
Confidence 99985532 23478888999999998864
No 348
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=95.50 E-value=0.029 Score=51.06 Aligned_cols=96 Identities=17% Similarity=0.223 Sum_probs=63.5
Q ss_pred CCCeEEEEec--cccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccE
Q 037807 68 NPKKVLLIGG--GDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDA 145 (299)
Q Consensus 68 ~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDv 145 (299)
...+||++|+ |-|..+..+++..+. +|++++.+++-.+.+++.-... .++ .+ .|..+-+.+...+.+|+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~--vi~-~~-----~~~~~~~~~~~~~g~Dv 220 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKKMGADI--VLN-HK-----ESLLNQFKTQGIELVDY 220 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHHHHHTCSE--EEC-TT-----SCHHHHHHHHTCCCEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcE--EEE-CC-----ccHHHHHHHhCCCCccE
Confidence 4678999963 345666777777665 8999999999999888732100 000 11 24444444443467998
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 146 IIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 146 Ii~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
|+-... ....++.+.+.|+++|.++.-
T Consensus 221 v~d~~g----------~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 221 VFCTFN----------TDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp EEESSC----------HHHHHHHHHHHEEEEEEEEES
T ss_pred EEECCC----------chHHHHHHHHHhccCCEEEEE
Confidence 884322 155688999999999999864
No 349
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=95.44 E-value=0.02 Score=52.14 Aligned_cols=98 Identities=10% Similarity=0.084 Sum_probs=63.1
Q ss_pred CCCCeEEEEec--cccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEE-EccHHHHHHhcCCCCc
Q 037807 67 PNPKKVLLIGG--GDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILH-VCDGSEYLKTVQSGTF 143 (299)
Q Consensus 67 ~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~-~~D~~~~l~~~~~~~f 143 (299)
...++||++|+ |.|..+..+++..+. +|++++.+++-.+.+++. .. +.-+.+. ..|..+.+.+...+.+
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~~-g~------~~~~d~~~~~~~~~~~~~~~~~~~ 239 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRSI-GG------EVFIDFTKEKDIVGAVLKATDGGA 239 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHHHHHHHT-TC------CEEEETTTCSCHHHHHHHHHTSCE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHHHHHHHc-CC------ceEEecCccHhHHHHHHHHhCCCC
Confidence 34688999997 455666666765554 899999998888887763 11 1001111 1244444443212379
Q ss_pred cEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 144 DAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 144 DvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
|+|+..... .+.++.+.+.|+++|.++.-
T Consensus 240 D~vi~~~g~----------~~~~~~~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 240 HGVINVSVS----------EAAIEASTRYVRANGTTVLV 268 (347)
T ss_dssp EEEEECSSC----------HHHHHHHTTSEEEEEEEEEC
T ss_pred CEEEECCCc----------HHHHHHHHHHHhcCCEEEEE
Confidence 999865432 45788899999999998864
No 350
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=95.32 E-value=0.099 Score=47.71 Aligned_cols=149 Identities=16% Similarity=0.116 Sum_probs=88.8
Q ss_pred CCeEEEEeccccHHHHHHHhcC-CccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHh-cCCCCccEE
Q 037807 69 PKKVLLIGGGDGGILREISRHA-SVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKT-VQSGTFDAI 146 (299)
Q Consensus 69 ~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~~fDvI 146 (299)
+-+|+++-||.|++...+.+.. +.+-|.++|+|+...+..+.+++. ..++.+|..++..+ .+...+|+|
T Consensus 3 ~~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~---------~~~~~~DI~~~~~~~~~~~~~D~l 73 (333)
T 4h0n_A 3 SHKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPE---------TNLLNRNIQQLTPQVIKKWNVDTI 73 (333)
T ss_dssp CEEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT---------SCEECCCGGGCCHHHHHHTTCCEE
T ss_pred CCEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCC---------CceeccccccCCHHHhccCCCCEE
Confidence 3479999999999999887653 136688999999999999998863 23566777654322 112369999
Q ss_pred EEcCCCCC----C-------CCCCCCcHHHHHHHHHhcC-CCcEEEEecCCcccchHHHHHHHHHHhhhcCCceeeeEEe
Q 037807 147 IIDAFDPI----R-------PGHDLFEGPFFELVAKALR-PGGAMCIQAESLWFQQFSVQHLIDDCHRIFKGSASYAWTT 214 (299)
Q Consensus 147 i~D~~~~~----~-------~~~~l~t~ef~~~~~~~Lk-pgGvlv~~~~s~~~~~~~~~~~~~~l~~~F~~~v~~~~~~ 214 (299)
+..++-.. + +...|+ .++++ +.+.++ |.-+++=|..... ....+..+++.|++.= ..+......
T Consensus 74 ~ggpPCQ~fS~ag~~~~~~d~r~~L~-~~~~r-~i~~~~~P~~~vlENV~gl~-~~~~~~~i~~~l~~~G-Y~v~~~vl~ 149 (333)
T 4h0n_A 74 LMSPPCQPFTRNGKYLDDNDPRTNSF-LYLIG-ILDQLDNVDYILMENVKGFE-NSTVRNLFIDKLKECN-FIYQEFLLC 149 (333)
T ss_dssp EECCCCCCSEETTEECCTTCTTSCCH-HHHHH-HGGGCTTCCEEEEEECTTGG-GSHHHHHHHHHHHHTT-EEEEEEEEC
T ss_pred EecCCCcchhhhhhccCCcCcccccH-HHHHH-HHHHhcCCCEEEEecchhhh-hhhHHHHHHHHHHhCC-CeEEEEEec
Confidence 98665321 1 112233 34444 344565 8777776664332 3345667777776541 122222122
Q ss_pred ecccC---CcceeEEeccc
Q 037807 215 VPTYP---SGVIGFMLCST 230 (299)
Q Consensus 215 vP~~~---~g~w~~~~ask 230 (299)
--.|+ .-.-.|++|++
T Consensus 150 a~~~GvPQ~R~R~fiva~r 168 (333)
T 4h0n_A 150 PSTVGVPNSRLRYYCTARR 168 (333)
T ss_dssp TTTTTCSCCCCEEEEEEEE
T ss_pred HHHcCCCccceEEEEEEEe
Confidence 12231 12355888887
No 351
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=95.27 E-value=0.025 Score=51.93 Aligned_cols=98 Identities=20% Similarity=0.226 Sum_probs=65.0
Q ss_pred CCCCeEEEEe--ccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCcc
Q 037807 67 PNPKKVLLIG--GGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFD 144 (299)
Q Consensus 67 ~~~~~VL~IG--~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fD 144 (299)
...++||++| +|.|..+..+++..+. +|++++.+++-.+.+++. .. +.-+.....|..+.+++...+.+|
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~-Ga------~~~~~~~~~~~~~~~~~~~~~g~D 233 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKSL-GC------DRPINYKTEPVGTVLKQEYPEGVD 233 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT-TC------SEEEETTTSCHHHHHHHHCTTCEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHc-CC------cEEEecCChhHHHHHHHhcCCCCC
Confidence 4568999999 5667778888886655 799999999988888763 21 100110112444444443245799
Q ss_pred EEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 145 AIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 145 vIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
+|+-... ...++.+.+.|+++|.++.-.
T Consensus 234 ~vid~~g-----------~~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 234 VVYESVG-----------GAMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp EEEECSC-----------THHHHHHHHHEEEEEEEEECC
T ss_pred EEEECCC-----------HHHHHHHHHHHhcCCEEEEEe
Confidence 9984432 136788899999999988743
No 352
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=95.25 E-value=0.29 Score=46.91 Aligned_cols=125 Identities=14% Similarity=0.068 Sum_probs=83.0
Q ss_pred CCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHH------------
Q 037807 69 PKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLK------------ 136 (299)
Q Consensus 69 ~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~------------ 136 (299)
.-+|++|-||.|++...+.+. +..-|.++|+|+...+.-+.++.. .|...++.+|..++..
T Consensus 88 ~~~viDLFaG~GGlslG~~~a-G~~~v~avE~d~~A~~ty~~N~~~------~p~~~~~~~DI~~i~~~~~~~~~~~~~~ 160 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESI-GGQCVFTSEWNKHAVRTYKANHYC------DPATHHFNEDIRDITLSHQEGVSDEAAA 160 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTT-TEEEEEEECCCHHHHHHHHHHSCC------CTTTCEEESCTHHHHCTTCTTSCHHHHH
T ss_pred cceEEEecCCccHHHHHHHHC-CCEEEEEEeCCHHHHHHHHHhccc------CCCcceeccchhhhhhccccccchhhHH
Confidence 468999999999999988765 466789999999999998888742 3556678899888752
Q ss_pred ----hcCCCCccEEEEcCCCCC----CC----------------CCCCCcHHHHHHHHHhcCCCcEEEEecCCcccc--h
Q 037807 137 ----TVQSGTFDAIIIDAFDPI----RP----------------GHDLFEGPFFELVAKALRPGGAMCIQAESLWFQ--Q 190 (299)
Q Consensus 137 ----~~~~~~fDvIi~D~~~~~----~~----------------~~~l~t~ef~~~~~~~LkpgGvlv~~~~s~~~~--~ 190 (299)
.. ...+|+|+..++... +. ...|+ .++++ +.+.++|.-+++=|+...... .
T Consensus 161 ~~i~~~-~~~~Dvl~gGpPCQ~FS~AG~~k~~~~g~~~G~~~D~R~~Lf-~e~~r-iI~~~rPk~fvlENV~gl~s~~~g 237 (482)
T 3me5_A 161 EHIRQH-IPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLF-FDVVR-IIDARRPAMFVLENVKNLKSHDKG 237 (482)
T ss_dssp HHHHHH-SCCCSEEEEECCCCCC------------------CTTTTSHH-HHHHH-HHHHHCCSEEEEEEETTTTTGGGG
T ss_pred hhhhhc-CCCCCEEEecCCCcchhhhCcccccccccccccccCccccHH-HHHHH-HHHHcCCcEEEEeCcHHHhcccCC
Confidence 11 246899998665421 10 00111 33333 344678987777666444322 2
Q ss_pred HHHHHHHHHHhhh
Q 037807 191 FSVQHLIDDCHRI 203 (299)
Q Consensus 191 ~~~~~~~~~l~~~ 203 (299)
..+..+++.|.+.
T Consensus 238 ~~f~~i~~~L~~l 250 (482)
T 3me5_A 238 KTFRIIMQTLDEL 250 (482)
T ss_dssp HHHHHHHHHHHHT
T ss_pred cHHHHHHHHHhcC
Confidence 4677777777653
No 353
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=95.20 E-value=0.026 Score=51.37 Aligned_cols=96 Identities=16% Similarity=0.181 Sum_probs=63.8
Q ss_pred CCCCeEEEEec--cccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcC-CCCc
Q 037807 67 PNPKKVLLIGG--GDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQ-SGTF 143 (299)
Q Consensus 67 ~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~-~~~f 143 (299)
...++||++|+ |-|..+..+++..+. +|++++.+++-.+.+++.-. +.-+... .|..+.+.+.. ...+
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga-------~~v~~~~-~~~~~~v~~~~~~~g~ 228 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVGA-------DIVLPLE-EGWAKAVREATGGAGV 228 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTC-------SEEEESS-TTHHHHHHHHTTTSCE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCC-------cEEecCc-hhHHHHHHHHhCCCCc
Confidence 35689999996 456777778887665 89999999998888887411 1111111 34444444432 3479
Q ss_pred cEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 144 DAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 144 DvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
|+|+-....+ .++.+.+.|+++|.++.-
T Consensus 229 Dvvid~~g~~-----------~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 229 DMVVDPIGGP-----------AFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp EEEEESCC-------------CHHHHHHTEEEEEEEEEC
T ss_pred eEEEECCchh-----------HHHHHHHhhcCCCEEEEE
Confidence 9998543321 367788999999999863
No 354
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=95.18 E-value=0.073 Score=50.07 Aligned_cols=96 Identities=16% Similarity=0.197 Sum_probs=61.9
Q ss_pred CCeEEEEeccccH-HHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHH--HHHhcCCCCccE
Q 037807 69 PKKVLLIGGGDGG-ILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSE--YLKTVQSGTFDA 145 (299)
Q Consensus 69 ~~~VL~IG~G~G~-~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~--~l~~~~~~~fDv 145 (299)
..+|+++|+|--+ .....++..+ ..|++||.|++.++.+++. .+.++.+|+.+ .|+...-++.|+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g-~~vvvId~d~~~v~~~~~~-----------g~~vi~GDat~~~~L~~agi~~A~~ 71 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSG-VKMVVLDHDPDHIETLRKF-----------GMKVFYGDATRMDLLESAGAAKAEV 71 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT-CCEEEEECCHHHHHHHHHT-----------TCCCEESCTTCHHHHHHTTTTTCSE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC-CCEEEEECCHHHHHHHHhC-----------CCeEEEcCCCCHHHHHhcCCCccCE
Confidence 4579999987522 2222232223 5799999999999988752 35678899843 565543468999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 146 IIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 146 Ii~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
||+-..++. .....-...+.+.|+..+++.+
T Consensus 72 viv~~~~~~-------~n~~i~~~ar~~~p~~~Iiara 102 (413)
T 3l9w_A 72 LINAIDDPQ-------TNLQLTEMVKEHFPHLQIIARA 102 (413)
T ss_dssp EEECCSSHH-------HHHHHHHHHHHHCTTCEEEEEE
T ss_pred EEECCCChH-------HHHHHHHHHHHhCCCCeEEEEE
Confidence 998765531 1233445566778887666644
No 355
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=95.18 E-value=0.021 Score=51.64 Aligned_cols=97 Identities=19% Similarity=0.140 Sum_probs=63.8
Q ss_pred CCCCeEEEEec--cccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhc-CCCCc
Q 037807 67 PNPKKVLLIGG--GDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTV-QSGTF 143 (299)
Q Consensus 67 ~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~~f 143 (299)
...++||++|+ |-|..+..+++..+. +|++++.+++-.+.+++.-. +.-+.....|..+.+.+. ....+
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga-------~~~~~~~~~~~~~~~~~~~~~~g~ 218 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAKEYGA-------EYLINASKEDILRQVLKFTNGKGV 218 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTC-------SEEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCC-------cEEEeCCCchHHHHHHHHhCCCCc
Confidence 35689999993 556667777777664 89999999999988877421 100111113444444433 23579
Q ss_pred cEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 144 DAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 144 DvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
|+|+-.... +.++.+.+.|+++|.++.-
T Consensus 219 D~vid~~g~-----------~~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 219 DASFDSVGK-----------DTFEISLAALKRKGVFVSF 246 (334)
T ss_dssp EEEEECCGG-----------GGHHHHHHHEEEEEEEEEC
T ss_pred eEEEECCCh-----------HHHHHHHHHhccCCEEEEE
Confidence 999854321 2477888999999999874
No 356
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=95.17 E-value=0.031 Score=50.68 Aligned_cols=98 Identities=12% Similarity=0.134 Sum_probs=63.8
Q ss_pred CCCCeEEEEec--cccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEE-ccHHHHHHhcCCCCc
Q 037807 67 PNPKKVLLIGG--GDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHV-CDGSEYLKTVQSGTF 143 (299)
Q Consensus 67 ~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~-~D~~~~l~~~~~~~f 143 (299)
...++||++|+ |-|..+..+++..+. +|++++.+++-.+.+++.+.. +.-+.... .|..+.+.+...+.+
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~~g~------~~~~d~~~~~~~~~~~~~~~~~~~ 226 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMGC-YVVGSAGSKEKVDLLKTKFGF------DDAFNYKEESDLTAALKRCFPNGI 226 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTSCC------SEEEETTSCSCSHHHHHHHCTTCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCC------ceEEecCCHHHHHHHHHHHhCCCC
Confidence 35688999996 556666777776554 799999999988888743321 00011000 234444544323579
Q ss_pred cEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 144 DAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 144 DvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
|+|+.... .+.++.+.+.|+++|.+++-
T Consensus 227 d~vi~~~g-----------~~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 227 DIYFENVG-----------GKMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp EEEEESSC-----------HHHHHHHHTTEEEEEEEEEC
T ss_pred cEEEECCC-----------HHHHHHHHHHHhcCCEEEEE
Confidence 99985432 24678889999999998864
No 357
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=95.13 E-value=0.035 Score=50.70 Aligned_cols=96 Identities=10% Similarity=0.068 Sum_probs=61.4
Q ss_pred CeEEEEec--cccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEE
Q 037807 70 KKVLLIGG--GDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAII 147 (299)
Q Consensus 70 ~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi 147 (299)
++||+.|+ |-|..+..+++..+..+|++++.+++-.+.+++.+.. +.-+.....|..+.+.+...+.+|+||
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~------~~~~d~~~~~~~~~~~~~~~~~~d~vi 235 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGF------DAAINYKKDNVAEQLRESCPAGVDVYF 235 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCC------SEEEETTTSCHHHHHHHHCTTCEEEEE
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCC------ceEEecCchHHHHHHHHhcCCCCCEEE
Confidence 79999996 4455556666665554899999999888887764421 100111112344444433233799998
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 148 IDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 148 ~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
.... .+.++.+.+.|+++|.++.-
T Consensus 236 ~~~G-----------~~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 236 DNVG-----------GNISDTVISQMNENSHIILC 259 (357)
T ss_dssp ESCC-----------HHHHHHHHHTEEEEEEEEEC
T ss_pred ECCC-----------HHHHHHHHHHhccCcEEEEE
Confidence 5432 24678889999999998864
No 358
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.09 E-value=0.054 Score=49.23 Aligned_cols=90 Identities=13% Similarity=0.046 Sum_probs=62.1
Q ss_pred CCCCeEEEEeccc-cHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccE
Q 037807 67 PNPKKVLLIGGGD-GGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDA 145 (299)
Q Consensus 67 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDv 145 (299)
....+||++|+|. |.++..+++..+. +|++++.+++-.+.+++. .. . .++ .|.. .+ .+.+|+
T Consensus 175 ~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~l-Ga-------~--~v~-~~~~-~~----~~~~D~ 237 (348)
T 3two_A 175 TKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALSM-GV-------K--HFY-TDPK-QC----KEELDF 237 (348)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHHT-TC-------S--EEE-SSGG-GC----CSCEEE
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhc-CC-------C--eec-CCHH-HH----hcCCCE
Confidence 4568999999875 6677778887665 899999999999988773 21 1 122 3321 11 237999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 146 IIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 146 Ii~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
|+-....+ +.++.+.+.|+++|.++.-.
T Consensus 238 vid~~g~~----------~~~~~~~~~l~~~G~iv~~G 265 (348)
T 3two_A 238 IISTIPTH----------YDLKDYLKLLTYNGDLALVG 265 (348)
T ss_dssp EEECCCSC----------CCHHHHHTTEEEEEEEEECC
T ss_pred EEECCCcH----------HHHHHHHHHHhcCCEEEEEC
Confidence 98433222 23678889999999998743
No 359
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=95.05 E-value=0.23 Score=47.57 Aligned_cols=109 Identities=12% Similarity=0.086 Sum_probs=65.5
Q ss_pred CCCeEEEEeccccH--HHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhh-cCC--------CCCCEEEEEccHHHHHH
Q 037807 68 NPKKVLLIGGGDGG--ILREISRHASVEQIHICEIDTMLINVYKEYFPEIA-IGY--------EDSRVILHVCDGSEYLK 136 (299)
Q Consensus 68 ~~~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~-~~~--------~~~rv~v~~~D~~~~l~ 136 (299)
...+|.+||+|.=+ ++..+++.. .+|+++|+|++.++..++.-.... .+. ...++++ ..|..+.+.
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G--~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~-ttd~~~a~~ 83 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIG--HDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRF-STDIEAAVA 83 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ECCHHHHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhCC--CEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEE-ECCHHHHhh
Confidence 45789999999533 344455543 479999999999998876421000 000 0123333 345443333
Q ss_pred hcCCCCccEEEEcCCCCCCC---CCCCCcHHHHHHHHHhcCCCcEEEEecC
Q 037807 137 TVQSGTFDAIIIDAFDPIRP---GHDLFEGPFFELVAKALRPGGAMCIQAE 184 (299)
Q Consensus 137 ~~~~~~fDvIi~D~~~~~~~---~~~l~t~ef~~~~~~~LkpgGvlv~~~~ 184 (299)
..|+||+-.+.|... +.--+..+.++.+.+.|+++-+++..++
T Consensus 84 -----~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~ST 129 (478)
T 2y0c_A 84 -----HGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKST 129 (478)
T ss_dssp -----HCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSC
T ss_pred -----cCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence 369999987765322 1112346777888889999777765443
No 360
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=94.97 E-value=0.026 Score=51.39 Aligned_cols=98 Identities=17% Similarity=0.202 Sum_probs=61.5
Q ss_pred CCCCeEEEEecc--ccHHHHHHHhcC-CccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCC-CC
Q 037807 67 PNPKKVLLIGGG--DGGILREISRHA-SVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQS-GT 142 (299)
Q Consensus 67 ~~~~~VL~IG~G--~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~-~~ 142 (299)
...++||++|+| .|..+..+++.. +. +|++++.+++-.+.+++. .. +.-+.....|..+.+.+... +.
T Consensus 169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~~-g~------~~~~~~~~~~~~~~~~~~~~~~~ 240 (347)
T 1jvb_A 169 DPTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRA-GA------DYVINASMQDPLAEIRRITESKG 240 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHH-TC------SEEEETTTSCHHHHHHHHTTTSC
T ss_pred CCCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHHh-CC------CEEecCCCccHHHHHHHHhcCCC
Confidence 356899999987 344555566654 44 799999999998888763 11 10011111233333443322 57
Q ss_pred ccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 143 FDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 143 fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
+|+|+..... ...++.+.+.|+++|.++.-
T Consensus 241 ~d~vi~~~g~----------~~~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 241 VDAVIDLNNS----------EKTLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp EEEEEESCCC----------HHHHTTGGGGEEEEEEEEEC
T ss_pred ceEEEECCCC----------HHHHHHHHHHHhcCCEEEEE
Confidence 9999854321 44677888999999998874
No 361
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=94.97 E-value=0.11 Score=48.41 Aligned_cols=107 Identities=16% Similarity=0.203 Sum_probs=58.9
Q ss_pred CCCeEEEEeccccH-HHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCC--CCEEEEE----c----cHHHHHH
Q 037807 68 NPKKVLLIGGGDGG-ILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYED--SRVILHV----C----DGSEYLK 136 (299)
Q Consensus 68 ~~~~VL~IG~G~G~-~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~--~rv~v~~----~----D~~~~l~ 136 (299)
++.+|++||+|.=+ .+...++..+. +|+++|.++...+.+++. ...-..++. ....... . .-..-+.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~l-Ga~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~ 260 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGA-KTTGYDVRPEVAEQVRSV-GAQWLDLGIDAAGEGGYARELSEAERAQQQQALE 260 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSGGGHHHHHHT-TCEECCCC-------------CHHHHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc-CCeEEeccccccccccchhhhhHHHHhhhHHHHH
Confidence 46899999998533 33334444444 799999999988887763 110000000 0000000 0 0011122
Q ss_pred hcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEE
Q 037807 137 TVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCI 181 (299)
Q Consensus 137 ~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~ 181 (299)
+. -...|+||.-...|....+.|.+.+ +.+.+|||++++-
T Consensus 261 e~-l~~aDIVI~tv~iPg~~ap~Lvt~e----mv~~MkpGsVIVD 300 (381)
T 3p2y_A 261 DA-ITKFDIVITTALVPGRPAPRLVTAA----AATGMQPGSVVVD 300 (381)
T ss_dssp HH-HTTCSEEEECCCCTTSCCCCCBCHH----HHHTSCTTCEEEE
T ss_pred HH-HhcCCEEEECCCCCCcccceeecHH----HHhcCCCCcEEEE
Confidence 22 2578999976555544455677664 5567899887774
No 362
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=94.96 E-value=0.022 Score=51.42 Aligned_cols=98 Identities=8% Similarity=-0.005 Sum_probs=63.8
Q ss_pred CCCCeEEEEe--ccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhc-CCCCc
Q 037807 67 PNPKKVLLIG--GGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTV-QSGTF 143 (299)
Q Consensus 67 ~~~~~VL~IG--~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~~f 143 (299)
...++||++| +|-|..+..+++..+. +|++++.+++-.+.+++.-. +.-+.....|..+.+.+. ....+
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga-------~~~~~~~~~~~~~~~~~~~~~~g~ 210 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKALGA-------WETIDYSHEDVAKRVLELTDGKKC 210 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTC-------SEEEETTTSCHHHHHHHHTTTCCE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCC-------CEEEeCCCccHHHHHHHHhCCCCc
Confidence 3568999999 3456677777776554 89999999999998886421 111111113444444433 23579
Q ss_pred cEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 144 DAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 144 DvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
|+|+-.... +.++.+.+.|+++|.++.-.
T Consensus 211 Dvvid~~g~-----------~~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 211 PVVYDGVGQ-----------DTWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp EEEEESSCG-----------GGHHHHHTTEEEEEEEEECC
T ss_pred eEEEECCCh-----------HHHHHHHHHhcCCCEEEEEe
Confidence 998854321 24678889999999998753
No 363
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=94.96 E-value=0.2 Score=46.12 Aligned_cols=97 Identities=19% Similarity=0.286 Sum_probs=54.9
Q ss_pred CCCeEEEEeccccHHHHHH---HhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCcc
Q 037807 68 NPKKVLLIGGGDGGILREI---SRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFD 144 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l---~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fD 144 (299)
.+++|+++|+| .+++.+ ++..+. +|+++|.+++-.+.+++.+. ..+.....+..++-+.. ...|
T Consensus 165 ~~~~V~ViGaG--~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~~g--------~~~~~~~~~~~~l~~~~--~~~D 231 (369)
T 2eez_A 165 APASVVILGGG--TVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDVFG--------GRVITLTATEANIKKSV--QHAD 231 (369)
T ss_dssp CCCEEEEECCS--HHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTT--------TSEEEEECCHHHHHHHH--HHCS
T ss_pred CCCEEEEECCC--HHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcC--------ceEEEecCCHHHHHHHH--hCCC
Confidence 36899999984 444443 344444 89999999988877765432 12333333332222211 3589
Q ss_pred EEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEE
Q 037807 145 AIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCI 181 (299)
Q Consensus 145 vIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~ 181 (299)
+||.....+......+.+. .+.+.|++||+++.
T Consensus 232 vVi~~~g~~~~~~~~li~~----~~l~~mk~gg~iV~ 264 (369)
T 2eez_A 232 LLIGAVLVPGAKAPKLVTR----DMLSLMKEGAVIVD 264 (369)
T ss_dssp EEEECCC-------CCSCH----HHHTTSCTTCEEEE
T ss_pred EEEECCCCCccccchhHHH----HHHHhhcCCCEEEE
Confidence 9987655432122234344 45567899998775
No 364
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=94.95 E-value=0.015 Score=52.80 Aligned_cols=98 Identities=13% Similarity=0.029 Sum_probs=62.0
Q ss_pred CCCCeEEEEecc--ccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhc-CCCCc
Q 037807 67 PNPKKVLLIGGG--DGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTV-QSGTF 143 (299)
Q Consensus 67 ~~~~~VL~IG~G--~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~~f 143 (299)
...++||++|+| -|..+..+++..+. +|++++.+++-.+.+++.-. +.-+.....|..+-+.+. ....+
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lga-------~~~~~~~~~~~~~~~~~~~~~~g~ 214 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRLGA-------AYVIDTSTAPLYETVMELTNGIGA 214 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTC-------SEEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhCCC-------cEEEeCCcccHHHHHHHHhCCCCC
Confidence 456899999986 46677777776554 89999999998888887321 101111113444444433 23479
Q ss_pred cEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 144 DAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 144 DvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
|+|+-.... .. .....+.|+++|.++.-.
T Consensus 215 Dvvid~~g~----------~~-~~~~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 215 DAAIDSIGG----------PD-GNELAFSLRPNGHFLTIG 243 (340)
T ss_dssp EEEEESSCH----------HH-HHHHHHTEEEEEEEEECC
T ss_pred cEEEECCCC----------hh-HHHHHHHhcCCCEEEEEe
Confidence 999854322 22 334458999999998743
No 365
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=94.93 E-value=0.025 Score=51.75 Aligned_cols=97 Identities=18% Similarity=0.163 Sum_probs=62.8
Q ss_pred CCCCeEEEEec--cccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCcc
Q 037807 67 PNPKKVLLIGG--GDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFD 144 (299)
Q Consensus 67 ~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fD 144 (299)
...++||++|+ |-|..+..+++..+. +|++++.+++-.+.+++.-. +.-+.....|..+.+.+...+.+|
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa-------~~~~~~~~~~~~~~~~~~~~~g~D 237 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERLGA-------KRGINYRSEDFAAVIKAETGQGVD 237 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTC-------SEEEETTTSCHHHHHHHHHSSCEE
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCC-------CEEEeCCchHHHHHHHHHhCCCce
Confidence 35688999963 446667777776665 79999999999998887421 101111112344444332246799
Q ss_pred EEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 145 AIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 145 vIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
+|+-.... +.++.+.+.|+++|.++.-
T Consensus 238 vvid~~g~-----------~~~~~~~~~l~~~G~iv~~ 264 (353)
T 4dup_A 238 IILDMIGA-----------AYFERNIASLAKDGCLSII 264 (353)
T ss_dssp EEEESCCG-----------GGHHHHHHTEEEEEEEEEC
T ss_pred EEEECCCH-----------HHHHHHHHHhccCCEEEEE
Confidence 98854321 2467788999999998874
No 366
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=94.83 E-value=0.11 Score=47.63 Aligned_cols=94 Identities=16% Similarity=0.201 Sum_probs=59.1
Q ss_pred CCCeEEEEeccc-cHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 68 NPKKVLLIGGGD-GGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 68 ~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
...+||++|+|. |..+..+++..+. +|++++.+++-.+.+++.+.. + .++..+-.+.+.+. .+.+|+|
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~lGa------~---~v~~~~~~~~~~~~-~~~~D~v 255 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGS-KVTVISTSPSKKEEALKNFGA------D---SFLVSRDQEQMQAA-AGTLDGI 255 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGHHHHHHTSCC------S---EEEETTCHHHHHHT-TTCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCC------c---eEEeccCHHHHHHh-hCCCCEE
Confidence 567999999754 4455666776654 799999999888877744431 1 11211112344443 3579999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
+-....+. .++.+.+.|+++|.++.-
T Consensus 256 id~~g~~~----------~~~~~~~~l~~~G~iv~~ 281 (366)
T 1yqd_A 256 IDTVSAVH----------PLLPLFGLLKSHGKLILV 281 (366)
T ss_dssp EECCSSCC----------CSHHHHHHEEEEEEEEEC
T ss_pred EECCCcHH----------HHHHHHHHHhcCCEEEEE
Confidence 85443221 135667889999998864
No 367
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.69 E-value=0.098 Score=41.67 Aligned_cols=101 Identities=13% Similarity=0.172 Sum_probs=55.4
Q ss_pred CCCCeEEEEeccccH-HHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHH--HHHHhcCCCCc
Q 037807 67 PNPKKVLLIGGGDGG-ILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGS--EYLKTVQSGTF 143 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~-~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~--~~l~~~~~~~f 143 (299)
....+|+++|+|.=+ .....++..+ .+|+++|.+++.++.+++ .....++.+|.. +.+.+..-..+
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g-~~V~vid~~~~~~~~~~~----------~~g~~~~~~d~~~~~~l~~~~~~~a 85 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSG-HSVVVVDKNEYAFHRLNS----------EFSGFTVVGDAAEFETLKECGMEKA 85 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCGGGGGGSCT----------TCCSEEEESCTTSHHHHHTTTGGGC
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCC-CeEEEEECCHHHHHHHHh----------cCCCcEEEecCCCHHHHHHcCcccC
Confidence 346789999986422 2222233333 479999999876543221 123455666653 23332212468
Q ss_pred cEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCC
Q 037807 144 DAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAES 185 (299)
Q Consensus 144 DvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s 185 (299)
|+||.-..++. .......+.+.+.+...++....+
T Consensus 86 d~Vi~~~~~~~-------~~~~~~~~~~~~~~~~~iv~~~~~ 120 (155)
T 2g1u_A 86 DMVFAFTNDDS-------TNFFISMNARYMFNVENVIARVYD 120 (155)
T ss_dssp SEEEECSSCHH-------HHHHHHHHHHHTSCCSEEEEECSS
T ss_pred CEEEEEeCCcH-------HHHHHHHHHHHHCCCCeEEEEECC
Confidence 99998665431 122333445556666777765544
No 368
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=94.67 E-value=0.058 Score=48.91 Aligned_cols=98 Identities=17% Similarity=0.147 Sum_probs=62.9
Q ss_pred CCCCeEEEEec--cccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhc-CCCCc
Q 037807 67 PNPKKVLLIGG--GDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTV-QSGTF 143 (299)
Q Consensus 67 ~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~~f 143 (299)
...++||++|+ |.|..+..+++..+. +|++++.+++-.+.+++. .. +.-+.....|..+.+.+. ....+
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~-ga------~~~~d~~~~~~~~~~~~~~~~~~~ 236 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKAL-GA------DETVNYTHPDWPKEVRRLTGGKGA 236 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHH-TC------SEEEETTSTTHHHHHHHHTTTTCE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhc-CC------CEEEcCCcccHHHHHHHHhCCCCc
Confidence 34689999997 556677777776554 899999999998888753 11 100111112333334332 13479
Q ss_pred cEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 144 DAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 144 DvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
|+|+.... + +.++.+.+.|+++|.++.-.
T Consensus 237 d~vi~~~g-~----------~~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 237 DKVVDHTG-A----------LYFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp EEEEESSC-S----------SSHHHHHHHEEEEEEEEESS
T ss_pred eEEEECCC-H----------HHHHHHHHhhccCCEEEEEe
Confidence 99986543 2 13677889999999988643
No 369
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=94.58 E-value=0.12 Score=47.59 Aligned_cols=97 Identities=12% Similarity=0.082 Sum_probs=63.1
Q ss_pred CCCCeEEEEecc--ccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCcc
Q 037807 67 PNPKKVLLIGGG--DGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFD 144 (299)
Q Consensus 67 ~~~~~VL~IG~G--~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fD 144 (299)
....+||++|++ -|.++..+++..+. +|+++ .+++-.+.+++.=. +.-+.....|..+.+++..++.+|
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~-~~~~~~~~~~~lGa-------~~vi~~~~~~~~~~v~~~t~g~~d 233 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGY-IPIAT-CSPHNFDLAKSRGA-------EEVFDYRAPNLAQTIRTYTKNNLR 233 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEE-ECGGGHHHHHHTTC-------SEEEETTSTTHHHHHHHHTTTCCC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHHcCC-------cEEEECCCchHHHHHHHHccCCcc
Confidence 456789999983 57788888887665 67766 48888888876411 111111123555555544345699
Q ss_pred EEEEcCCCCCCCCCCCCcHHHHHHHHHhc-CCCcEEEEe
Q 037807 145 AIIIDAFDPIRPGHDLFEGPFFELVAKAL-RPGGAMCIQ 182 (299)
Q Consensus 145 vIi~D~~~~~~~~~~l~t~ef~~~~~~~L-kpgGvlv~~ 182 (299)
+|+-.... .+.++.+.+.| +++|.++.-
T Consensus 234 ~v~d~~g~----------~~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 234 YALDCITN----------VESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp EEEESSCS----------HHHHHHHHHHSCTTCEEEEES
T ss_pred EEEECCCc----------hHHHHHHHHHhhcCCCEEEEE
Confidence 98843221 46688888899 699998863
No 370
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.57 E-value=0.24 Score=39.15 Aligned_cols=100 Identities=11% Similarity=0.075 Sum_probs=60.8
Q ss_pred CCeEEEEeccccHHHHHHHh---cCCccEEEEEECC-HHHHHHHHhhchhhhcCCCCCCEEEEEccHH--HHHHhcCCCC
Q 037807 69 PKKVLLIGGGDGGILREISR---HASVEQIHICEID-TMLINVYKEYFPEIAIGYEDSRVILHVCDGS--EYLKTVQSGT 142 (299)
Q Consensus 69 ~~~VL~IG~G~G~~~~~l~~---~~~~~~v~~VEid-~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~--~~l~~~~~~~ 142 (299)
.++|+++|+ |.+++.+++ ..+ .+|+++|.+ ++..+..++.+ ...+.++.+|+. +.+.+..-+.
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g-~~V~vid~~~~~~~~~~~~~~--------~~~~~~i~gd~~~~~~l~~a~i~~ 71 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRG-QNVTVISNLPEDDIKQLEQRL--------GDNADVIPGDSNDSSVLKKAGIDR 71 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTT-CCEEEEECCCHHHHHHHHHHH--------CTTCEEEESCTTSHHHHHHHTTTT
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCC-CCEEEEECCChHHHHHHHHhh--------cCCCeEEEcCCCCHHHHHHcChhh
Confidence 457999986 455555543 222 579999998 45444443322 235788999885 3444332467
Q ss_pred ccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCCc
Q 037807 143 FDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAESL 186 (299)
Q Consensus 143 fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s~ 186 (299)
.|+|++-..+.. .........+.+.|...+++...++
T Consensus 72 ad~vi~~~~~d~-------~n~~~~~~a~~~~~~~~ii~~~~~~ 108 (153)
T 1id1_A 72 CRAILALSDNDA-------DNAFVVLSAKDMSSDVKTVLAVSDS 108 (153)
T ss_dssp CSEEEECSSCHH-------HHHHHHHHHHHHTSSSCEEEECSSG
T ss_pred CCEEEEecCChH-------HHHHHHHHHHHHCCCCEEEEEECCH
Confidence 899998765431 1234445567777888777755443
No 371
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=94.55 E-value=0.084 Score=48.20 Aligned_cols=94 Identities=11% Similarity=0.094 Sum_probs=59.0
Q ss_pred CCCeEEEEeccc-cHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 68 NPKKVLLIGGGD-GGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 68 ~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
...+||++|+|. |..+..+++..+. +|++++.+++-.+.+++.+.. + . ++..+-.+.+.+. .+.+|+|
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~~lGa------~-~--vi~~~~~~~~~~~-~~g~D~v 248 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQDLGA------D-D--YVIGSDQAKMSEL-ADSLDYV 248 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHTTSCC------S-C--EEETTCHHHHHHS-TTTEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHcCC------c-e--eeccccHHHHHHh-cCCCCEE
Confidence 568999998753 4455666776554 799999999888888744431 1 1 1111112344443 3579999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
+-....+ ..++.+.+.|+++|.++.-
T Consensus 249 id~~g~~----------~~~~~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 249 IDTVPVH----------HALEPYLSLLKLDGKLILM 274 (357)
T ss_dssp EECCCSC----------CCSHHHHTTEEEEEEEEEC
T ss_pred EECCCCh----------HHHHHHHHHhccCCEEEEe
Confidence 8443221 1245677899999998874
No 372
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.54 E-value=0.2 Score=47.00 Aligned_cols=108 Identities=13% Similarity=0.172 Sum_probs=60.6
Q ss_pred CCCeEEEEeccccH-HHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhc-CC---CC-CCEEEEE---ccH-----HH
Q 037807 68 NPKKVLLIGGGDGG-ILREISRHASVEQIHICEIDTMLINVYKEYFPEIAI-GY---ED-SRVILHV---CDG-----SE 133 (299)
Q Consensus 68 ~~~~VL~IG~G~G~-~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~-~~---~~-~rv~v~~---~D~-----~~ 133 (299)
.+.+|++||+|.=+ .+..+++..+. +|+++|.++...+.+++.-..... .. ++ ....... .+- ..
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~ 267 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGA-VVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA 267 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence 46899999998533 33444555554 799999999988888763111000 00 00 0000000 000 01
Q ss_pred HHHhcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEE
Q 037807 134 YLKTVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCI 181 (299)
Q Consensus 134 ~l~~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~ 181 (299)
-+.+. -...|+||.-...|...++.|.+.+ +.+.+|||.+++-
T Consensus 268 ~l~e~-l~~aDVVI~tvlipg~~ap~Lvt~e----mv~~Mk~GsVIVD 310 (405)
T 4dio_A 268 LVAEH-IAKQDIVITTALIPGRPAPRLVTRE----MLDSMKPGSVVVD 310 (405)
T ss_dssp HHHHH-HHTCSEEEECCCCSSSCCCCCBCHH----HHTTSCTTCEEEE
T ss_pred HHHHH-hcCCCEEEECCcCCCCCCCEEecHH----HHhcCCCCCEEEE
Confidence 12211 2468999987655654566777764 5667899888875
No 373
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.42 E-value=0.4 Score=37.12 Aligned_cols=94 Identities=10% Similarity=0.116 Sum_probs=56.0
Q ss_pred CCeEEEEeccccHHHHHHHh---cCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHH--HHHhcCCCCc
Q 037807 69 PKKVLLIGGGDGGILREISR---HASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSE--YLKTVQSGTF 143 (299)
Q Consensus 69 ~~~VL~IG~G~G~~~~~l~~---~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~--~l~~~~~~~f 143 (299)
.++|+++|+|. +++.+++ ..+ .+|+++|.|++.++.+++. .+.++.+|..+ .+++..-..+
T Consensus 6 ~~~v~I~G~G~--iG~~la~~L~~~g-~~V~~id~~~~~~~~~~~~-----------~~~~~~gd~~~~~~l~~~~~~~~ 71 (141)
T 3llv_A 6 RYEYIVIGSEA--AGVGLVRELTAAG-KKVLAVDKSKEKIELLEDE-----------GFDAVIADPTDESFYRSLDLEGV 71 (141)
T ss_dssp CCSEEEECCSH--HHHHHHHHHHHTT-CCEEEEESCHHHHHHHHHT-----------TCEEEECCTTCHHHHHHSCCTTC
T ss_pred CCEEEEECCCH--HHHHHHHHHHHCC-CeEEEEECCHHHHHHHHHC-----------CCcEEECCCCCHHHHHhCCcccC
Confidence 35799999864 4444332 222 4799999999988766542 35677788743 4444323579
Q ss_pred cEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecC
Q 037807 144 DAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAE 184 (299)
Q Consensus 144 DvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~ 184 (299)
|+|++-..+.. .........+.+. ...++....
T Consensus 72 d~vi~~~~~~~-------~n~~~~~~a~~~~-~~~iia~~~ 104 (141)
T 3llv_A 72 SAVLITGSDDE-------FNLKILKALRSVS-DVYAIVRVS 104 (141)
T ss_dssp SEEEECCSCHH-------HHHHHHHHHHHHC-CCCEEEEES
T ss_pred CEEEEecCCHH-------HHHHHHHHHHHhC-CceEEEEEc
Confidence 99998655321 0122333445566 565655443
No 374
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=94.40 E-value=0.065 Score=48.36 Aligned_cols=98 Identities=14% Similarity=0.112 Sum_probs=62.1
Q ss_pred CCCCeEEEEec--cccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhc-CCCCc
Q 037807 67 PNPKKVLLIGG--GDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTV-QSGTF 143 (299)
Q Consensus 67 ~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~~f 143 (299)
...++||+.|+ |-|..+..+++..+. +|++++.+++-.+.+++. .. +.-+.....|..+-+.+. ....+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~-g~------~~~~d~~~~~~~~~i~~~~~~~~~ 215 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKL-GC------HHTINYSTQDFAEVVREITGGKGV 215 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHH-TC------SEEEETTTSCHHHHHHHHHTTCCE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc-CC------CEEEECCCHHHHHHHHHHhCCCCC
Confidence 35688999994 566677777776554 899999999888888763 11 100111112333333322 23469
Q ss_pred cEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 144 DAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 144 DvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
|+|+..... +.++.+.+.|+++|.++.-.
T Consensus 216 d~vi~~~g~-----------~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 216 DVVYDSIGK-----------DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp EEEEECSCT-----------TTHHHHHHTEEEEEEEEECC
T ss_pred eEEEECCcH-----------HHHHHHHHhhccCCEEEEEe
Confidence 999854322 23678889999999988643
No 375
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=94.32 E-value=0.069 Score=48.51 Aligned_cols=95 Identities=15% Similarity=0.196 Sum_probs=62.6
Q ss_pred CCCCeEEEEec--cccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhc-CCCCc
Q 037807 67 PNPKKVLLIGG--GDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTV-QSGTF 143 (299)
Q Consensus 67 ~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~~f 143 (299)
....+||++|+ |-|..+..+++..+. +|+++ .+++-.+.+++.-. +. +. ...|..+.+.+. ....+
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~lGa-------~~-i~-~~~~~~~~~~~~~~~~g~ 217 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRDLGA-------TP-ID-ASREPEDYAAEHTAGQGF 217 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHHHTS-------EE-EE-TTSCHHHHHHHHHTTSCE
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHHcCC-------CE-ec-cCCCHHHHHHHHhcCCCc
Confidence 35689999993 457777778887665 78888 88888888876411 11 22 223444444432 23579
Q ss_pred cEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 144 DAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 144 DvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
|+|+-... .+.+..+.+.|+++|.+++-.
T Consensus 218 D~vid~~g-----------~~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 218 DLVYDTLG-----------GPVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp EEEEESSC-----------THHHHHHHHHEEEEEEEEESC
T ss_pred eEEEECCC-----------cHHHHHHHHHHhcCCeEEEEc
Confidence 98884322 235778889999999998743
No 376
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=94.18 E-value=0.059 Score=49.30 Aligned_cols=94 Identities=21% Similarity=0.221 Sum_probs=59.5
Q ss_pred CCCCeEEEEeccc-cHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHH-HHHHhcCCCCcc
Q 037807 67 PNPKKVLLIGGGD-GGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGS-EYLKTVQSGTFD 144 (299)
Q Consensus 67 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~-~~l~~~~~~~fD 144 (299)
....+||++|+|. |..+..+++..+. +|++++.+++-.+.+++. .. + .++..+-. ++.+.. .+.+|
T Consensus 178 ~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~l-Ga------~---~v~~~~~~~~~~~~~-~~~~D 245 (360)
T 1piw_A 178 GPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKM-GA------D---HYIATLEEGDWGEKY-FDTFD 245 (360)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHH-TC------S---EEEEGGGTSCHHHHS-CSCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHc-CC------C---EEEcCcCchHHHHHh-hcCCC
Confidence 3568999999754 5666777776554 699999999988888863 21 1 12221111 233333 25799
Q ss_pred EEEEcCCC--CCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 145 AIIIDAFD--PIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 145 vIi~D~~~--~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
+||-.... +. .++.+.+.|+++|.++.-
T Consensus 246 ~vid~~g~~~~~----------~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 246 LIVVCASSLTDI----------DFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp EEEECCSCSTTC----------CTTTGGGGEEEEEEEEEC
T ss_pred EEEECCCCCcHH----------HHHHHHHHhcCCCEEEEe
Confidence 99854432 11 134566789999998863
No 377
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=94.15 E-value=0.061 Score=49.30 Aligned_cols=93 Identities=22% Similarity=0.250 Sum_probs=58.6
Q ss_pred CCeEEEEeccc-cHHHHHHHhcCCccEEEEEECCH---HHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCcc
Q 037807 69 PKKVLLIGGGD-GGILREISRHASVEQIHICEIDT---MLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFD 144 (299)
Q Consensus 69 ~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~---~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fD 144 (299)
.++||++|+|. |..+..+++..+. +|++++.++ +-.+.+++.-. ..+. . .|..+.+.+. .+.+|
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~~ga--------~~v~-~-~~~~~~~~~~-~~~~d 248 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIEETKT--------NYYN-S-SNGYDKLKDS-VGKFD 248 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHHHHTC--------EEEE-C-TTCSHHHHHH-HCCEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHHHhCC--------ceec-h-HHHHHHHHHh-CCCCC
Confidence 68999999743 4445556665554 899999998 77787775311 1111 0 1222333322 35799
Q ss_pred EEEEcCCCCCCCCCCCCcHHHH-HHHHHhcCCCcEEEEec
Q 037807 145 AIIIDAFDPIRPGHDLFEGPFF-ELVAKALRPGGAMCIQA 183 (299)
Q Consensus 145 vIi~D~~~~~~~~~~l~t~ef~-~~~~~~LkpgGvlv~~~ 183 (299)
+|+.....+ ..+ +.+.+.|+++|.++.-.
T Consensus 249 ~vid~~g~~----------~~~~~~~~~~l~~~G~iv~~g 278 (366)
T 2cdc_A 249 VIIDATGAD----------VNILGNVIPLLGRNGVLGLFG 278 (366)
T ss_dssp EEEECCCCC----------THHHHHHGGGEEEEEEEEECS
T ss_pred EEEECCCCh----------HHHHHHHHHHHhcCCEEEEEe
Confidence 998554322 246 78889999999988643
No 378
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=94.14 E-value=0.34 Score=43.59 Aligned_cols=91 Identities=12% Similarity=0.028 Sum_probs=57.8
Q ss_pred CCeEEEEeccc--cHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHH-HHHhcCCCCccE
Q 037807 69 PKKVLLIGGGD--GGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSE-YLKTVQSGTFDA 145 (299)
Q Consensus 69 ~~~VL~IG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~-~l~~~~~~~fDv 145 (299)
..+|.+||+|. +.+++.+.+.....+|+++|.+++.++.+++. .. +.-...|..+ .+ ...|+
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~-G~---------~~~~~~~~~~~~~-----~~aDv 97 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL-GI---------IDEGTTSIAKVED-----FSPDF 97 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT-TS---------CSEEESCTTGGGG-----GCCSE
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHC-CC---------cchhcCCHHHHhh-----ccCCE
Confidence 46899999884 33444455443223899999999988877653 10 0012234333 22 35799
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEE
Q 037807 146 IIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCI 181 (299)
Q Consensus 146 Ii~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~ 181 (299)
||+-.+.. ...++++.+...|+++.+++-
T Consensus 98 Vilavp~~-------~~~~vl~~l~~~l~~~~iv~d 126 (314)
T 3ggo_A 98 VMLSSPVR-------TFREIAKKLSYILSEDATVTD 126 (314)
T ss_dssp EEECSCGG-------GHHHHHHHHHHHSCTTCEEEE
T ss_pred EEEeCCHH-------HHHHHHHHHhhccCCCcEEEE
Confidence 99876543 136788889999998876654
No 379
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=94.13 E-value=0.12 Score=46.25 Aligned_cols=75 Identities=20% Similarity=0.108 Sum_probs=55.4
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccE--EEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhc--CCCC
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQ--IHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTV--QSGT 142 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~--v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~--~~~~ 142 (299)
....+|+++-+|.|++...+.+. +..- |.++|+|+...+..+.+++ ...++.+|..++..+. ....
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~a-G~~~~~v~a~E~d~~a~~ty~~N~~---------~~~~~~~DI~~i~~~~i~~~~~ 83 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDL-GIQVDRYIASEVCEDSITVGMVRHQ---------GKIMYVGDVRSVTQKHIQEWGP 83 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHT-TBCEEEEEEECCCHHHHHHHHHHTT---------TCEEEECCGGGCCHHHHHHTCC
T ss_pred CCCCEEEEeCcCccHHHHHHHHC-CCccceEEEEECCHHHHHHHHHhCC---------CCceeCCChHHccHHHhcccCC
Confidence 35678999999999999888765 3443 6899999999998888764 3357788887653321 0247
Q ss_pred ccEEEEcCC
Q 037807 143 FDAIIIDAF 151 (299)
Q Consensus 143 fDvIi~D~~ 151 (299)
+|+|+..++
T Consensus 84 ~Dll~ggpP 92 (295)
T 2qrv_A 84 FDLVIGGSP 92 (295)
T ss_dssp CSEEEECCC
T ss_pred cCEEEecCC
Confidence 999998654
No 380
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=94.07 E-value=1 Score=40.87 Aligned_cols=149 Identities=10% Similarity=0.082 Sum_probs=86.3
Q ss_pred CCCeEEEEeccccHHHHHHHhcC-CccEE-EEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHh-cCCCCcc
Q 037807 68 NPKKVLLIGGGDGGILREISRHA-SVEQI-HICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKT-VQSGTFD 144 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~-~~~~v-~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~~fD 144 (299)
.+-+|+++.||.|++...+.+.. +.+.| .++|+|+...+..+.+++.. ++.+|..++..+ .+...+|
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~----------~~~~DI~~~~~~~i~~~~~D 78 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE----------VQVKNLDSISIKQIESLNCN 78 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC----------CBCCCTTTCCHHHHHHTCCC
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC----------cccCChhhcCHHHhccCCCC
Confidence 45689999999999999887653 13566 79999999999999987631 345565443221 1123689
Q ss_pred EEEEcCCCCCC------CCCCCC--cHHHHHHHH----Hhc--CCCcEEEEecCCcccchHHHHHHHHHHhhhcCCceee
Q 037807 145 AIIIDAFDPIR------PGHDLF--EGPFFELVA----KAL--RPGGAMCIQAESLWFQQFSVQHLIDDCHRIFKGSASY 210 (299)
Q Consensus 145 vIi~D~~~~~~------~~~~l~--t~ef~~~~~----~~L--kpgGvlv~~~~s~~~~~~~~~~~~~~l~~~F~~~v~~ 210 (299)
+|+..++-..- ....+- .-..|..+. +.+ +|.-+++=|.... .....+..+++.|++.= ..+..
T Consensus 79 il~ggpPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~gl-~~~~~~~~i~~~l~~~G-Y~v~~ 156 (327)
T 3qv2_A 79 TWFMSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPLF-KESLVFKEIYNILIKNQ-YYIKD 156 (327)
T ss_dssp EEEECCCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECGGG-GGSHHHHHHHHHHHHTT-CEEEE
T ss_pred EEEecCCccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEchhhh-cChHHHHHHHHHHHhCC-CEEEE
Confidence 99987653211 111111 112233333 345 6776666565332 23356677777776542 22322
Q ss_pred eEEe-----ecccCCcceeEEeccc
Q 037807 211 AWTT-----VPTYPSGVIGFMLCST 230 (299)
Q Consensus 211 ~~~~-----vP~~~~g~w~~~~ask 230 (299)
.... +|.- -.-.|++|++
T Consensus 157 ~vl~a~~yGvPQ~--R~R~fivg~r 179 (327)
T 3qv2_A 157 IICSPIDIGIPNS--RTRYYVMARL 179 (327)
T ss_dssp EEECGGGGTCSBC--CCEEEEEEES
T ss_pred EEEeHHHcCCCcc--ceEEEEEEEe
Confidence 2222 3332 2356888887
No 381
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=94.05 E-value=0.048 Score=48.82 Aligned_cols=87 Identities=14% Similarity=0.182 Sum_probs=56.6
Q ss_pred CCCCeEEEEeccc-cHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccE
Q 037807 67 PNPKKVLLIGGGD-GGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDA 145 (299)
Q Consensus 67 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDv 145 (299)
....+||++|+|. |.++..+++..+. +|++++ +++-.+.+++. . ...+..| .++. .+.+|+
T Consensus 141 ~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~l-G----------a~~v~~d----~~~v-~~g~Dv 202 (315)
T 3goh_A 141 TKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKR-G----------VRHLYRE----PSQV-TQKYFA 202 (315)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHH-T----------EEEEESS----GGGC-CSCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHc-C----------CCEEEcC----HHHh-CCCccE
Confidence 4568999999854 6677778886665 899999 88888888773 1 1111124 2333 568999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 146 IIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 146 Ii~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
|+-....+ ....+.+.|+++|.++.-
T Consensus 203 v~d~~g~~-----------~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 203 IFDAVNSQ-----------NAAALVPSLKANGHIICI 228 (315)
T ss_dssp EECC------------------TTGGGEEEEEEEEEE
T ss_pred EEECCCch-----------hHHHHHHHhcCCCEEEEE
Confidence 88322211 124567899999998875
No 382
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=93.94 E-value=0.068 Score=48.80 Aligned_cols=98 Identities=14% Similarity=0.096 Sum_probs=60.8
Q ss_pred CCCCeEEEEec--cccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhc-CCCCc
Q 037807 67 PNPKKVLLIGG--GDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTV-QSGTF 143 (299)
Q Consensus 67 ~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~~f 143 (299)
...++||+.|+ |-|..+..+++..+. +|++++.+++-.+.+++. .. +.-+.....|..+-+.+. ....+
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~-g~------~~~~~~~~~~~~~~~~~~~~~~~~ 232 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEKL-GA------AAGFNYKKEDFSEATLKFTKGAGV 232 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHH-TC------SEEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHc-CC------cEEEecCChHHHHHHHHHhcCCCc
Confidence 34678999984 455566666766554 799999999988888653 11 100111112333333332 23469
Q ss_pred cEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 144 DAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 144 DvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
|+||..... +.++.+.+.|+++|.++.-.
T Consensus 233 d~vi~~~G~-----------~~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 233 NLILDCIGG-----------SYWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp EEEEESSCG-----------GGHHHHHHHEEEEEEEEECC
T ss_pred eEEEECCCc-----------hHHHHHHHhccCCCEEEEEe
Confidence 999855432 13677789999999988743
No 383
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=93.79 E-value=0.1 Score=47.64 Aligned_cols=98 Identities=15% Similarity=0.039 Sum_probs=61.5
Q ss_pred CCCCeEEEEec--cccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhc-CCCCc
Q 037807 67 PNPKKVLLIGG--GDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTV-QSGTF 143 (299)
Q Consensus 67 ~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~~f 143 (299)
...++||+.|+ |-|..+..+++..+. +|++++.+++-.+.+++.-. +.-+.....|..+-+.+. ....+
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga-------~~~~d~~~~~~~~~~~~~~~~~~~ 240 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGA-------HEVFNHREVNYIDKIKKYVGEKGI 240 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTC-------SEEEETTSTTHHHHHHHHHCTTCE
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHcCC-------CEEEeCCCchHHHHHHHHcCCCCc
Confidence 35689999996 445666667776554 79999999998887775311 100111112333333322 23479
Q ss_pred cEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 144 DAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 144 DvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
|+|+.... .+.+..+.+.|+++|.++.-.
T Consensus 241 D~vi~~~G-----------~~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 241 DIIIEMLA-----------NVNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp EEEEESCH-----------HHHHHHHHHHEEEEEEEEECC
T ss_pred EEEEECCC-----------hHHHHHHHHhccCCCEEEEEe
Confidence 99985432 234677889999999988743
No 384
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=93.78 E-value=0.15 Score=45.21 Aligned_cols=91 Identities=14% Similarity=0.109 Sum_probs=60.7
Q ss_pred CCCCeEEEEec--cccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccH-HHHHHhcCCCCc
Q 037807 67 PNPKKVLLIGG--GDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDG-SEYLKTVQSGTF 143 (299)
Q Consensus 67 ~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~-~~~l~~~~~~~f 143 (299)
...++||++|+ |.|..+..+++..+. +|++++.+++-.+.+++. .. + .++..+- .++.+.. +.+
T Consensus 124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~-ga------~---~~~~~~~~~~~~~~~--~~~ 190 (302)
T 1iz0_A 124 RPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLAL-GA------E---EAATYAEVPERAKAW--GGL 190 (302)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHT-TC------S---EEEEGGGHHHHHHHT--TSE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhc-CC------C---EEEECCcchhHHHHh--cCc
Confidence 45689999996 446667777776665 899999999888888653 11 1 1222221 2343332 579
Q ss_pred cEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 144 DAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 144 DvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
|+|+- ... +.++.+.+.|+++|.++.-
T Consensus 191 d~vid-~g~-----------~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 191 DLVLE-VRG-----------KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp EEEEE-CSC-----------TTHHHHHTTEEEEEEEEEC
T ss_pred eEEEE-CCH-----------HHHHHHHHhhccCCEEEEE
Confidence 99985 432 1367888999999998863
No 385
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=93.71 E-value=0.063 Score=48.26 Aligned_cols=98 Identities=13% Similarity=0.010 Sum_probs=60.7
Q ss_pred CCCCeEEEEe--ccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhc-CCCCc
Q 037807 67 PNPKKVLLIG--GGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTV-QSGTF 143 (299)
Q Consensus 67 ~~~~~VL~IG--~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~~f 143 (299)
...++||+.| +|-|..+..+++..+. +|++++.+++-.+.+++. .. +.-+.....|..+-+.+. ....+
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~-g~------~~~~~~~~~~~~~~~~~~~~~~~~ 210 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKA-GA------WQVINYREEDLVERLKEITGGKKV 210 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHH-TC------SEEEETTTSCHHHHHHHHTTTCCE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHc-CC------CEEEECCCccHHHHHHHHhCCCCc
Confidence 3468899999 3455556666665444 799999999988888763 11 100110012333333322 23469
Q ss_pred cEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 144 DAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 144 DvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
|+||.... .+.++.+.+.|+++|.++.-.
T Consensus 211 D~vi~~~g-----------~~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 211 RVVYDSVG-----------RDTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp EEEEECSC-----------GGGHHHHHHTEEEEEEEEECC
T ss_pred eEEEECCc-----------hHHHHHHHHHhcCCCEEEEEe
Confidence 99986543 124778889999999988643
No 386
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=93.65 E-value=0.13 Score=44.87 Aligned_cols=34 Identities=26% Similarity=0.448 Sum_probs=22.7
Q ss_pred CCeEEEEeccc-cHHHHHHHhcCCccEEEEEECCH
Q 037807 69 PKKVLLIGGGD-GGILREISRHASVEQIHICEIDT 102 (299)
Q Consensus 69 ~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~ 102 (299)
.++||++|+|+ |......+...++.+++.||.|.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 57899999874 22222222233678999999997
No 387
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.62 E-value=0.47 Score=39.85 Aligned_cols=95 Identities=17% Similarity=0.170 Sum_probs=59.2
Q ss_pred eEEEEeccccHHHHHHHh---cCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHH--HHHhcCCCCccE
Q 037807 71 KVLLIGGGDGGILREISR---HASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSE--YLKTVQSGTFDA 145 (299)
Q Consensus 71 ~VL~IG~G~G~~~~~l~~---~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~--~l~~~~~~~fDv 145 (299)
+|+++|+| .++..+++ ..+ .+|+++|.|++.++...+.. .+.++.+|+.+ .+++..-+..|+
T Consensus 2 ~iiIiG~G--~~G~~la~~L~~~g-~~v~vid~~~~~~~~l~~~~----------~~~~i~gd~~~~~~l~~a~i~~ad~ 68 (218)
T 3l4b_C 2 KVIIIGGE--TTAYYLARSMLSRK-YGVVIINKDRELCEEFAKKL----------KATIIHGDGSHKEILRDAEVSKNDV 68 (218)
T ss_dssp CEEEECCH--HHHHHHHHHHHHTT-CCEEEEESCHHHHHHHHHHS----------SSEEEESCTTSHHHHHHHTCCTTCE
T ss_pred EEEEECCC--HHHHHHHHHHHhCC-CeEEEEECCHHHHHHHHHHc----------CCeEEEcCCCCHHHHHhcCcccCCE
Confidence 68999975 45444443 222 47999999999887654321 45678888754 344432467999
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCC
Q 037807 146 IIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAES 185 (299)
Q Consensus 146 Ii~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s 185 (299)
|++-..+.. ...+.....+.+.+...+++...+
T Consensus 69 vi~~~~~d~-------~n~~~~~~a~~~~~~~~iia~~~~ 101 (218)
T 3l4b_C 69 VVILTPRDE-------VNLFIAQLVMKDFGVKRVVSLVND 101 (218)
T ss_dssp EEECCSCHH-------HHHHHHHHHHHTSCCCEEEECCCS
T ss_pred EEEecCCcH-------HHHHHHHHHHHHcCCCeEEEEEeC
Confidence 998655431 133444555667777777765433
No 388
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=93.62 E-value=0.21 Score=46.70 Aligned_cols=106 Identities=16% Similarity=0.241 Sum_probs=55.9
Q ss_pred CCCeEEEEeccccH-HHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHH------H-------
Q 037807 68 NPKKVLLIGGGDGG-ILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGS------E------- 133 (299)
Q Consensus 68 ~~~~VL~IG~G~G~-~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~------~------- 133 (299)
.+.+|+++|+|.=+ .+..+++..+. +|+++|.++...+.+++. ......+ +..-.....++. +
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~v~D~~~~~~~~~~~l-Ga~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~ 247 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSM-GAEFLEL-DFKEEAGSGDGYAKVMSDAFIKAEME 247 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCGGGHHHHHHT-TCEECCC---------CCHHHHHHSHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHc-CCEEEEe-cccccccccccchhhccHHHHHHHHH
Confidence 36899999987533 23344555554 799999999888777543 2100000 000000000111 0
Q ss_pred HHHhcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEE
Q 037807 134 YLKTVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCI 181 (299)
Q Consensus 134 ~l~~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~ 181 (299)
-+.+. -...|+||.-...|......+.+.+ +.+.|++||+++-
T Consensus 248 ~l~e~-~~~aDvVI~~~~~pg~~ap~li~~~----~l~~mk~g~vIVd 290 (401)
T 1x13_A 248 LFAAQ-AKEVDIIVTTALIPGKPAPKLITRE----MVDSMKAGSVIVD 290 (401)
T ss_dssp HHHHH-HHHCSEEEECCCCTTSCCCCCBCHH----HHHTSCTTCEEEE
T ss_pred HHHHH-hCCCCEEEECCccCCCCCCeeeCHH----HHhcCCCCcEEEE
Confidence 12221 1347999976434322234566554 4456899998875
No 389
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=93.61 E-value=1.1 Score=42.79 Aligned_cols=111 Identities=16% Similarity=0.180 Sum_probs=64.1
Q ss_pred CeEEEEeccccHH--HHHHHhcCCccEEEEEECCHHHHHHHHhhchhhh-cCC-------CCCCEEEEEccHHHHHHhcC
Q 037807 70 KKVLLIGGGDGGI--LREISRHASVEQIHICEIDTMLINVYKEYFPEIA-IGY-------EDSRVILHVCDGSEYLKTVQ 139 (299)
Q Consensus 70 ~~VL~IG~G~G~~--~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~-~~~-------~~~rv~v~~~D~~~~l~~~~ 139 (299)
.+|.+||+|.=+. +..+++.....+|+++|+|++.++..++...... .++ ...++++ ..|..+.+.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~-t~~~~~~~~--- 85 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFF-SSDIPKAIA--- 85 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE-ESCHHHHHH---
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEE-ECCHHHHhh---
Confidence 5899999986443 4445555213579999999999887765211000 000 0112332 344434333
Q ss_pred CCCccEEEEcCCCCCCC-------CCCC-CcHHHHHHHHHhcCCCcEEEEecCCc
Q 037807 140 SGTFDAIIIDAFDPIRP-------GHDL-FEGPFFELVAKALRPGGAMCIQAESL 186 (299)
Q Consensus 140 ~~~fDvIi~D~~~~~~~-------~~~l-~t~ef~~~~~~~LkpgGvlv~~~~s~ 186 (299)
..|+||+..+.|... ...+ +..+..+.+.+.|++|.+++..++.+
T Consensus 86 --~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~ 138 (481)
T 2o3j_A 86 --EADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVP 138 (481)
T ss_dssp --HCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCC
T ss_pred --cCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 369999987666421 1111 24667788888999877776544333
No 390
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=93.60 E-value=0.31 Score=45.12 Aligned_cols=107 Identities=16% Similarity=0.181 Sum_probs=56.3
Q ss_pred CCCeEEEEeccccH-HHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCC----------EEEEEcc----HH
Q 037807 68 NPKKVLLIGGGDGG-ILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSR----------VILHVCD----GS 132 (299)
Q Consensus 68 ~~~~VL~IG~G~G~-~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~r----------v~v~~~D----~~ 132 (299)
.+.+|+++|+|.=+ .+..+++..+. +|+++|.++...+.+++ +.......+... .+....| ..
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~~~d~~~~~~~~~~~-~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~ 248 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVES-LGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA 248 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHH-TTCEECCC-----------------------CCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH-cCCeEEeecccccccccccccchhhcCHHHHhhhH
Confidence 47899999987533 23344555555 69999999987777765 321000000000 0000000 11
Q ss_pred HHHHhcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEE
Q 037807 133 EYLKTVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCI 181 (299)
Q Consensus 133 ~~l~~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~ 181 (299)
+-+.+. -...|+||.-...|..+.+.+.+.+ ..+.|+|||+++-
T Consensus 249 ~~l~~~-~~~aDvVi~~~~~pg~~~~~li~~~----~l~~mk~g~vivd 292 (384)
T 1l7d_A 249 EAVLKE-LVKTDIAITTALIPGKPAPVLITEE----MVTKMKPGSVIID 292 (384)
T ss_dssp HHHHHH-HTTCSEEEECCCCTTSCCCCCSCHH----HHTTSCTTCEEEE
T ss_pred HHHHHH-hCCCCEEEECCccCCCCCCeeeCHH----HHhcCCCCCEEEE
Confidence 112222 2468999965544433334455544 4456899998775
No 391
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=93.55 E-value=1.3 Score=41.87 Aligned_cols=107 Identities=13% Similarity=0.115 Sum_probs=62.9
Q ss_pred CeEEEEeccccHH--HHHHHhcCCccEEEEEECCHHHHHHHHhhchhhh-cCC--------CCCCEEEEEccHHHHHHhc
Q 037807 70 KKVLLIGGGDGGI--LREISRHASVEQIHICEIDTMLINVYKEYFPEIA-IGY--------EDSRVILHVCDGSEYLKTV 138 (299)
Q Consensus 70 ~~VL~IG~G~G~~--~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~-~~~--------~~~rv~v~~~D~~~~l~~~ 138 (299)
.+|.+||+|.=+. +..+++.. .+|+++|+|++.++..++...... .+. ...++++ ..|..+.++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G--~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~-t~d~~ea~~-- 77 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELG--ANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRF-GTEIEQAVP-- 77 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEE-ESCHHHHGG--
T ss_pred CEEEEECcCHHHHHHHHHHHhcC--CEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEE-ECCHHHHHh--
Confidence 4799999875333 33344442 479999999999887766321100 000 0223443 345444433
Q ss_pred CCCCccEEEEcCCCCCCCC--CCC-CcHHHHHHHHHhcCCCcEEEEecC
Q 037807 139 QSGTFDAIIIDAFDPIRPG--HDL-FEGPFFELVAKALRPGGAMCIQAE 184 (299)
Q Consensus 139 ~~~~fDvIi~D~~~~~~~~--~~l-~t~ef~~~~~~~LkpgGvlv~~~~ 184 (299)
..|+||+-.+.|.... ..+ +..+.++.+.+.|++|-+++..++
T Consensus 78 ---~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~ST 123 (450)
T 3gg2_A 78 ---EADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKST 123 (450)
T ss_dssp ---GCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSC
T ss_pred ---cCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeee
Confidence 4699999776653221 111 236677888888988777766553
No 392
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=93.41 E-value=0.021 Score=65.08 Aligned_cols=103 Identities=14% Similarity=0.143 Sum_probs=49.7
Q ss_pred CCeEEEEeccccHHHHHHHhcCC-----ccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCc
Q 037807 69 PKKVLLIGGGDGGILREISRHAS-----VEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTF 143 (299)
Q Consensus 69 ~~~VL~IG~G~G~~~~~l~~~~~-----~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~f 143 (299)
..+||+||.|+|.++..+++.-. ..+.+..|+++...+.+++.|... .++.-.-|..+. .......|
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~-------di~~~~~d~~~~-~~~~~~~y 1312 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL-------HVTQGQWDPANP-APGSLGKA 1312 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH-------TEEEECCCSSCC-CC-----C
T ss_pred CceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc-------cccccccccccc-ccCCCCce
Confidence 46899999999988776654321 357899999998888888776543 111100010000 00013569
Q ss_pred cEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 144 DAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 144 DvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
|+||....-+..+. ..+.++++++.|+|||.+++..
T Consensus 1313 dlvia~~vl~~t~~----~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1313 DLLVCNCALATLGD----PAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp CEEEEECC------------------------CCEEEEEE
T ss_pred eEEEEccccccccc----HHHHHHHHHHhcCCCcEEEEEe
Confidence 99997532221111 1456889999999999988753
No 393
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.19 E-value=0.46 Score=38.63 Aligned_cols=94 Identities=12% Similarity=0.057 Sum_probs=55.9
Q ss_pred CCeEEEEeccccHHHHHHH----hcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHH--HHHHhc-CCC
Q 037807 69 PKKVLLIGGGDGGILREIS----RHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGS--EYLKTV-QSG 141 (299)
Q Consensus 69 ~~~VL~IG~G~G~~~~~l~----~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~--~~l~~~-~~~ 141 (299)
..+|+++|+|. ++..++ +..+ .+|+++|.|++.++.+++. .+.++.+|.. +.+.+. .-+
T Consensus 39 ~~~v~IiG~G~--~G~~~a~~L~~~~g-~~V~vid~~~~~~~~~~~~-----------g~~~~~gd~~~~~~l~~~~~~~ 104 (183)
T 3c85_A 39 HAQVLILGMGR--IGTGAYDELRARYG-KISLGIEIREEAAQQHRSE-----------GRNVISGDATDPDFWERILDTG 104 (183)
T ss_dssp TCSEEEECCSH--HHHHHHHHHHHHHC-SCEEEEESCHHHHHHHHHT-----------TCCEEECCTTCHHHHHTBCSCC
T ss_pred CCcEEEECCCH--HHHHHHHHHHhccC-CeEEEEECCHHHHHHHHHC-----------CCCEEEcCCCCHHHHHhccCCC
Confidence 45899999764 333332 3302 4799999999887766542 2445666653 334432 245
Q ss_pred CccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 142 TFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 142 ~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
.+|+|++-.++.. .....-...+.+.|++.+++.+
T Consensus 105 ~ad~vi~~~~~~~-------~~~~~~~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 105 HVKLVLLAMPHHQ-------GNQTALEQLQRRNYKGQIAAIA 139 (183)
T ss_dssp CCCEEEECCSSHH-------HHHHHHHHHHHTTCCSEEEEEE
T ss_pred CCCEEEEeCCChH-------HHHHHHHHHHHHCCCCEEEEEE
Confidence 7999998655421 0112223456677778777654
No 394
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=93.11 E-value=0.16 Score=46.65 Aligned_cols=97 Identities=15% Similarity=0.147 Sum_probs=58.6
Q ss_pred CCCCeEEEEe--ccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCcc
Q 037807 67 PNPKKVLLIG--GGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFD 144 (299)
Q Consensus 67 ~~~~~VL~IG--~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fD 144 (299)
....+||++| +|-|..+..+++..+. +|++++ +++-.+.+++. .. +.-+.....|..+-+.+ ...+|
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga-~Vi~~~-~~~~~~~~~~l-Ga------~~v~~~~~~~~~~~~~~--~~g~D 250 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWDA-HVTAVC-SQDASELVRKL-GA------DDVIDYKSGSVEEQLKS--LKPFD 250 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHHT-TC------SEEEETTSSCHHHHHHT--SCCBS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEe-ChHHHHHHHHc-CC------CEEEECCchHHHHHHhh--cCCCC
Confidence 3467999999 4556677778887664 788888 66667777553 11 10011111233444443 25799
Q ss_pred EEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 145 AIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 145 vIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
+|+-....+ ...++...+.|+++|.++.-.
T Consensus 251 ~vid~~g~~---------~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 251 FILDNVGGS---------TETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp EEEESSCTT---------HHHHGGGGBCSSSCCEEEESC
T ss_pred EEEECCCCh---------hhhhHHHHHhhcCCcEEEEeC
Confidence 998543322 133566778899999998743
No 395
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=93.04 E-value=0.32 Score=41.74 Aligned_cols=100 Identities=12% Similarity=0.088 Sum_probs=56.7
Q ss_pred HHHHhhcccCCCCCCeEEEEeccccHHHH--HHHhcCCccEEEEEECC--HHHHHHHHhhchhhhcCCCCCCEEEEEccH
Q 037807 56 EMITHLPLCSIPNPKKVLLIGGGDGGILR--EISRHASVEQIHICEID--TMLINVYKEYFPEIAIGYEDSRVILHVCDG 131 (299)
Q Consensus 56 e~l~~~~l~~~~~~~~VL~IG~G~G~~~~--~l~~~~~~~~v~~VEid--~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~ 131 (299)
|.+.++|++..-..++||++|+|.=+..+ .+++.. .+|++|+.+ +++.+++.+ .+++++..+.
T Consensus 18 ~~~~~~Pifl~L~gk~VLVVGgG~va~~ka~~Ll~~G--A~VtVvap~~~~~l~~l~~~-----------~~i~~i~~~~ 84 (223)
T 3dfz_A 18 EGRHMYTVMLDLKGRSVLVVGGGTIATRRIKGFLQEG--AAITVVAPTVSAEINEWEAK-----------GQLRVKRKKV 84 (223)
T ss_dssp ----CCEEEECCTTCCEEEECCSHHHHHHHHHHGGGC--CCEEEECSSCCHHHHHHHHT-----------TSCEEECSCC
T ss_pred cccCccccEEEcCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEECCCCCHHHHHHHHc-----------CCcEEEECCC
Confidence 56677888766678999999998644432 234443 578888543 444444332 3566654442
Q ss_pred HHHHHhcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 132 SEYLKTVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 132 ~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
. ... -..+|+||....++ +.-..+.+..+ -|+++..+
T Consensus 85 ~---~~d-L~~adLVIaAT~d~----------~~N~~I~~~ak-~gi~VNvv 121 (223)
T 3dfz_A 85 G---EED-LLNVFFIVVATNDQ----------AVNKFVKQHIK-NDQLVNMA 121 (223)
T ss_dssp C---GGG-SSSCSEEEECCCCT----------HHHHHHHHHSC-TTCEEEC-
T ss_pred C---HhH-hCCCCEEEECCCCH----------HHHHHHHHHHh-CCCEEEEe
Confidence 2 111 25689999765443 33445555556 78887544
No 396
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=92.87 E-value=0.18 Score=45.25 Aligned_cols=145 Identities=15% Similarity=0.099 Sum_probs=88.5
Q ss_pred eEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEEEcC
Q 037807 71 KVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAIIIDA 150 (299)
Q Consensus 71 ~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi~D~ 150 (299)
+|++|-||.|++..-+.+. +.+-|.++|+|+...+.-+.+++. +++.+|..+.-.+. -.+.|+|+..+
T Consensus 2 kvidLFsG~GG~~~G~~~a-G~~~v~a~e~d~~a~~ty~~N~~~----------~~~~~DI~~i~~~~-~~~~D~l~ggp 69 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKA-GFRIICANEYDKSIWKTYESNHSA----------KLIKGDISKISSDE-FPKCDGIIGGP 69 (331)
T ss_dssp EEEEESCTTCHHHHHHHHT-TCEEEEEEECCTTTHHHHHHHCCS----------EEEESCGGGCCGGG-SCCCSEEECCC
T ss_pred eEEEeCcCccHHHHHHHHC-CCEEEEEEeCCHHHHHHHHHHCCC----------CcccCChhhCCHhh-CCcccEEEecC
Confidence 7999999999998887665 567788999999999999888741 56788987754332 35789998754
Q ss_pred CCC----CC----C-C--CCCCcHHHHHHHHHhcCCCcEEEEecCCccc--chHHHHHHHHHHhhhcCCceeeeEEeecc
Q 037807 151 FDP----IR----P-G--HDLFEGPFFELVAKALRPGGAMCIQAESLWF--QQFSVQHLIDDCHRIFKGSASYAWTTVPT 217 (299)
Q Consensus 151 ~~~----~~----~-~--~~l~t~ef~~~~~~~LkpgGvlv~~~~s~~~--~~~~~~~~~~~l~~~F~~~v~~~~~~vP~ 217 (299)
+-. .+ . . ..|+ .++++ +.+.++|.-+++=|+..... ....+..+++.|.+.= ..+.+.....-.
T Consensus 70 PCQ~fS~ag~~~g~~d~R~~L~-~~~~r-~i~~~~Pk~~~~ENV~gl~~~~~~~~~~~i~~~l~~~G-Y~v~~~vlna~~ 146 (331)
T 3ubt_Y 70 PSQSWSEGGSLRGIDDPRGKLF-YEYIR-ILKQKKPIFFLAENVKGMMAQRHNKAVQEFIQEFDNAG-YDVHIILLNAND 146 (331)
T ss_dssp CGGGTEETTEECCTTCGGGHHH-HHHHH-HHHHHCCSEEEEEECCGGGGCTTSHHHHHHHHHHHHHT-EEEEEEEEEGGG
T ss_pred CCCCcCCCCCccCCCCchhHHH-HHHHH-HHhccCCeEEEeeeecccccccccchhhhhhhhhccCC-cEEEEEeccccc
Confidence 421 11 1 0 1121 33333 45568998777766643332 2246777777776542 223222222222
Q ss_pred cCC---cceeEEeccc
Q 037807 218 YPS---GVIGFMLCST 230 (299)
Q Consensus 218 ~~~---g~w~~~~ask 230 (299)
|+- -.=.|++|++
T Consensus 147 yGvPQ~R~Rvfivg~r 162 (331)
T 3ubt_Y 147 YGVAQDRKRVFYIGFR 162 (331)
T ss_dssp TTCSBCCEEEEEEEEE
T ss_pred CCCCcccceEEEEEEc
Confidence 311 1235777775
No 397
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=92.79 E-value=0.044 Score=49.73 Aligned_cols=62 Identities=13% Similarity=-0.050 Sum_probs=48.0
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHH
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYL 135 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l 135 (299)
.+...|||--||+|.++.++.+.. .+.+++|+++..++++++.+... ......+..|+.+..
T Consensus 251 ~~~~~VlDpF~GsGtt~~aa~~~g--r~~ig~e~~~~~~~~~~~r~~~~-----~~~~~~~~~~~~~i~ 312 (323)
T 1boo_A 251 EPDDLVVDIFGGSNTTGLVAERES--RKWISFEMKPEYVAASAFRFLDN-----NISEEKITDIYNRIL 312 (323)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHGGGSCS-----CSCHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcC--CCEEEEeCCHHHHHHHHHHHHhc-----ccchHHHHHHHHHHH
Confidence 345789999999999999988874 67999999999999999988643 223445555655554
No 398
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=92.79 E-value=0.13 Score=46.00 Aligned_cols=34 Identities=18% Similarity=0.408 Sum_probs=24.2
Q ss_pred CCeEEEEeccc-cHHHHHHHhcCCccEEEEEECCH
Q 037807 69 PKKVLLIGGGD-GGILREISRHASVEQIHICEIDT 102 (299)
Q Consensus 69 ~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~ 102 (299)
..+||+||+|+ |......+...++.+++.+|-|.
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 57999999985 33333333344789999999886
No 399
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=92.70 E-value=0.13 Score=45.94 Aligned_cols=90 Identities=13% Similarity=0.155 Sum_probs=59.9
Q ss_pred eEEEEec--cccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEEE
Q 037807 71 KVLLIGG--GDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAIII 148 (299)
Q Consensus 71 ~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi~ 148 (299)
+||++|+ |-|..+..+++..+. +|++++.+++-.+.+++. .. + .++..+-...+++...+.+|+|+
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~l-Ga------~---~vi~~~~~~~~~~~~~~~~d~v~- 216 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSL-GA------N---RILSRDEFAESRPLEKQLWAGAI- 216 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHH-TC------S---EEEEGGGSSCCCSSCCCCEEEEE-
T ss_pred eEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc-CC------C---EEEecCCHHHHHhhcCCCccEEE-
Confidence 4999995 567778888887765 899999999999988873 11 1 11111111112222245799876
Q ss_pred cCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 149 DAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 149 D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
|... .+.++.+.+.|+++|.++.-
T Consensus 217 d~~g----------~~~~~~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 217 DTVG----------DKVLAKVLAQMNYGGCVAAC 240 (324)
T ss_dssp ESSC----------HHHHHHHHHTEEEEEEEEEC
T ss_pred ECCC----------cHHHHHHHHHHhcCCEEEEE
Confidence 3321 34788999999999999874
No 400
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=92.68 E-value=1.3 Score=33.63 Aligned_cols=93 Identities=13% Similarity=0.098 Sum_probs=52.7
Q ss_pred CCeEEEEeccccHHHHHHHh---cCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHH--HHHHhcCCCCc
Q 037807 69 PKKVLLIGGGDGGILREISR---HASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGS--EYLKTVQSGTF 143 (299)
Q Consensus 69 ~~~VL~IG~G~G~~~~~l~~---~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~--~~l~~~~~~~f 143 (299)
..+|+++|+| .++..+++ ..+ .+|+++|.+++.++..++.+ .+.++.+|.. +.+.+..-..+
T Consensus 4 ~m~i~IiG~G--~iG~~~a~~L~~~g-~~v~~~d~~~~~~~~~~~~~----------~~~~~~~d~~~~~~l~~~~~~~~ 70 (140)
T 1lss_A 4 GMYIIIAGIG--RVGYTLAKSLSEKG-HDIVLIDIDKDICKKASAEI----------DALVINGDCTKIKTLEDAGIEDA 70 (140)
T ss_dssp -CEEEEECCS--HHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHC----------SSEEEESCTTSHHHHHHTTTTTC
T ss_pred CCEEEEECCC--HHHHHHHHHHHhCC-CeEEEEECCHHHHHHHHHhc----------CcEEEEcCCCCHHHHHHcCcccC
Confidence 3589999875 44444332 223 57999999998776554321 2345556643 23332213578
Q ss_pred cEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEE
Q 037807 144 DAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCI 181 (299)
Q Consensus 144 DvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~ 181 (299)
|+|++-..++. .......+.+.++++-+++.
T Consensus 71 d~vi~~~~~~~-------~~~~~~~~~~~~~~~~ii~~ 101 (140)
T 1lss_A 71 DMYIAVTGKEE-------VNLMSSLLAKSYGINKTIAR 101 (140)
T ss_dssp SEEEECCSCHH-------HHHHHHHHHHHTTCCCEEEE
T ss_pred CEEEEeeCCch-------HHHHHHHHHHHcCCCEEEEE
Confidence 99998754421 12334455666787654443
No 401
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=92.65 E-value=0.22 Score=46.67 Aligned_cols=48 Identities=15% Similarity=0.244 Sum_probs=40.6
Q ss_pred CCCCeEEEEeccccHHHHHHH-hcCC-ccEEEEEECCHHHHHHHHhhchh
Q 037807 67 PNPKKVLLIGGGDGGILREIS-RHAS-VEQIHICEIDTMLINVYKEYFPE 114 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~-~~~~-~~~v~~VEid~~vi~~a~~~~~~ 114 (299)
++...|+|||++.|..+..++ +..+ ..+|.++|.+|...+..++++..
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 456789999999999999887 4433 37999999999999999998765
No 402
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=92.55 E-value=0.099 Score=46.96 Aligned_cols=92 Identities=13% Similarity=0.161 Sum_probs=55.6
Q ss_pred eEEEEec--cccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEEE
Q 037807 71 KVLLIGG--GDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAIII 148 (299)
Q Consensus 71 ~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi~ 148 (299)
+||++|+ |-|..+..+++..+. +|++++.+++-.+.+++. .. +.-+.....| .+.++....+.+|+|+-
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~l-Ga------~~~i~~~~~~-~~~~~~~~~~~~d~vid 222 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVL-GA------KEVLAREDVM-AERIRPLDKQRWAAAVD 222 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHT-TC------SEEEECC----------CCSCCEEEEEE
T ss_pred eEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHc-CC------cEEEecCCcH-HHHHHHhcCCcccEEEE
Confidence 7999996 556677778887664 699999998888888763 21 1001110111 12223222357999874
Q ss_pred cCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 149 DAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 149 D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
.... +.++.+.+.|+++|.++.-
T Consensus 223 ~~g~-----------~~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 223 PVGG-----------RTLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp CSTT-----------TTHHHHHHTEEEEEEEEEC
T ss_pred CCcH-----------HHHHHHHHhhccCCEEEEE
Confidence 3321 1267788899999999874
No 403
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=92.11 E-value=1.2 Score=39.31 Aligned_cols=102 Identities=16% Similarity=0.230 Sum_probs=61.0
Q ss_pred CCeEEEEeccccH--HHHHHHhcCCccEEEEEECCHHHHHHHHhhchh----h-hcC-CCC------------CCEEEEE
Q 037807 69 PKKVLLIGGGDGG--ILREISRHASVEQIHICEIDTMLINVYKEYFPE----I-AIG-YED------------SRVILHV 128 (299)
Q Consensus 69 ~~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~----~-~~~-~~~------------~rv~v~~ 128 (299)
-++|.+||+|.=+ ++..+++. + .+|+++|.+++.++.+++.+.. . ..+ ... .++++ .
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~-G-~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~-~ 91 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAAT-G-HTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIAT-S 91 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-CEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEE-E
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEE-e
Confidence 3689999998633 44555554 2 4799999999988876553321 0 000 111 13443 2
Q ss_pred ccHHHHHHhcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 129 CDGSEYLKTVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 129 ~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
.|..+.+ ...|+||.-.+.... ...++++.+...++++.+++.++
T Consensus 92 ~~~~~~~-----~~aD~Vi~avp~~~~-----~~~~v~~~l~~~~~~~~iv~s~t 136 (302)
T 1f0y_A 92 TDAASVV-----HSTDLVVEAIVENLK-----VKNELFKRLDKFAAEHTIFASNT 136 (302)
T ss_dssp SCHHHHT-----TSCSEEEECCCSCHH-----HHHHHHHHHTTTSCTTCEEEECC
T ss_pred cCHHHhh-----cCCCEEEEcCcCcHH-----HHHHHHHHHHhhCCCCeEEEECC
Confidence 3433222 457999987654310 12467788888888888777654
No 404
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=92.10 E-value=2.5 Score=40.03 Aligned_cols=108 Identities=16% Similarity=0.200 Sum_probs=60.1
Q ss_pred CeEEEEeccccH--HHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhh-cC----C---CCCCEEEEEccHHHHHHhcC
Q 037807 70 KKVLLIGGGDGG--ILREISRHASVEQIHICEIDTMLINVYKEYFPEIA-IG----Y---EDSRVILHVCDGSEYLKTVQ 139 (299)
Q Consensus 70 ~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~-~~----~---~~~rv~v~~~D~~~~l~~~~ 139 (299)
.+|.+||+|.=+ ++..+++.....+|+++|++++.++..++.-.... .. . ...++++ ..|..+.++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~-t~~~~e~~~--- 81 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFF-STNIDDAIK--- 81 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE-ESCHHHHHH---
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEE-ECCHHHHHh---
Confidence 589999998543 34445555212479999999998876544210000 00 0 0023332 345444443
Q ss_pred CCCccEEEEcCCCCCCCCC-------CC-CcHHHHHHHHHhcCCCcEEEEec
Q 037807 140 SGTFDAIIIDAFDPIRPGH-------DL-FEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 140 ~~~fDvIi~D~~~~~~~~~-------~l-~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
..|+|++-.+.|..... .+ +..+..+.+.+.|++|.+++..+
T Consensus 82 --~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~S 131 (467)
T 2q3e_A 82 --EADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKS 131 (467)
T ss_dssp --HCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECS
T ss_pred --cCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECC
Confidence 36999998776543211 11 12456677788888876665433
No 405
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=92.03 E-value=1.6 Score=39.18 Aligned_cols=72 Identities=21% Similarity=0.296 Sum_probs=42.7
Q ss_pred CCCeEEEEeccccH--HHHHHH-hcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCcc
Q 037807 68 NPKKVLLIGGGDGG--ILREIS-RHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFD 144 (299)
Q Consensus 68 ~~~~VL~IG~G~G~--~~~~l~-~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fD 144 (299)
++.+|.+||+|.=+ .+..+. +.++.+-+.++|.+++..+.+.+.+. .+ ....|..+.+. ....|
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g-------~~---~~~~~~~~~l~---~~~~D 73 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELG-------VE---TTYTNYKDMID---TENID 73 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTC-------CS---EEESCHHHHHT---TSCCS
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhC-------CC---cccCCHHHHhc---CCCCC
Confidence 45789999998533 233344 44544434567999987765443321 11 23456666654 34689
Q ss_pred EEEEcCCC
Q 037807 145 AIIIDAFD 152 (299)
Q Consensus 145 vIi~D~~~ 152 (299)
+|++-.+.
T Consensus 74 ~V~i~tp~ 81 (346)
T 3cea_A 74 AIFIVAPT 81 (346)
T ss_dssp EEEECSCG
T ss_pred EEEEeCCh
Confidence 99876543
No 406
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=91.98 E-value=0.91 Score=38.42 Aligned_cols=97 Identities=18% Similarity=0.115 Sum_probs=60.2
Q ss_pred CCCeEEEEeccccHHHHHHHhcC--CccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHH--HHHHhcCCCCc
Q 037807 68 NPKKVLLIGGGDGGILREISRHA--SVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGS--EYLKTVQSGTF 143 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~--~~l~~~~~~~f 143 (299)
...+|+++|+| .+++.+++.- ... |+++|.|++.++.++ ..+.++.+|+. +.+++..-+..
T Consensus 8 ~~~~viI~G~G--~~G~~la~~L~~~g~-v~vid~~~~~~~~~~------------~~~~~i~gd~~~~~~l~~a~i~~a 72 (234)
T 2aef_A 8 KSRHVVICGWS--ESTLECLRELRGSEV-FVLAEDENVRKKVLR------------SGANFVHGDPTRVSDLEKANVRGA 72 (234)
T ss_dssp --CEEEEESCC--HHHHHHHHHSTTSEE-EEEESCGGGHHHHHH------------TTCEEEESCTTCHHHHHHTTCTTC
T ss_pred CCCEEEEECCC--hHHHHHHHHHHhCCe-EEEEECCHHHHHHHh------------cCCeEEEcCCCCHHHHHhcCcchh
Confidence 35689999985 6666665422 124 999999998776554 13678888885 34543324678
Q ss_pred cEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCCc
Q 037807 144 DAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAESL 186 (299)
Q Consensus 144 DvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s~ 186 (299)
|+|++-..+.. .........+.+.++..+++...++
T Consensus 73 d~vi~~~~~d~-------~n~~~~~~a~~~~~~~~iia~~~~~ 108 (234)
T 2aef_A 73 RAVIVDLESDS-------ETIHCILGIRKIDESVRIIAEAERY 108 (234)
T ss_dssp SEEEECCSCHH-------HHHHHHHHHHHHCSSSEEEEECSSG
T ss_pred cEEEEcCCCcH-------HHHHHHHHHHHHCCCCeEEEEECCH
Confidence 99998654421 1223344566678877777665443
No 407
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=91.98 E-value=0.36 Score=45.29 Aligned_cols=97 Identities=12% Similarity=0.033 Sum_probs=60.9
Q ss_pred CCCCeEEEEec--cccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEcc--------------
Q 037807 67 PNPKKVLLIGG--GDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCD-------------- 130 (299)
Q Consensus 67 ~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D-------------- 130 (299)
...++||++|+ |-|..+..+++..+ .+|++++.+++-.+.+++. .. +.-+.....|
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~G-a~vi~~~~~~~~~~~~~~l-Ga------~~~i~~~~~~~~~~~~~~~~~~~~ 290 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGG-GIPVAVVSSAQKEAAVRAL-GC------DLVINRAELGITDDIADDPRRVVE 290 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHT-TC------CCEEEHHHHTCCTTGGGCHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhc-CC------CEEEecccccccccccccccccch
Confidence 35688999995 44666777777765 4788888999999988763 21 1111110011
Q ss_pred ----HHHHHHhcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 131 ----GSEYLKTVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 131 ----~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
..+.+.+.....+|+|+-... .+.++...+.|+++|.++.-
T Consensus 291 ~~~~~~~~v~~~~g~g~Dvvid~~G-----------~~~~~~~~~~l~~~G~iv~~ 335 (447)
T 4a0s_A 291 TGRKLAKLVVEKAGREPDIVFEHTG-----------RVTFGLSVIVARRGGTVVTC 335 (447)
T ss_dssp HHHHHHHHHHHHHSSCCSEEEECSC-----------HHHHHHHHHHSCTTCEEEES
T ss_pred hhhHHHHHHHHHhCCCceEEEECCC-----------chHHHHHHHHHhcCCEEEEE
Confidence 022232222457999984322 24578888999999998874
No 408
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=91.95 E-value=1.7 Score=31.75 Aligned_cols=68 Identities=24% Similarity=0.313 Sum_probs=42.5
Q ss_pred CCeEEEEeccccHHHHHHHh---cCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHH--HHHhcCCCCc
Q 037807 69 PKKVLLIGGGDGGILREISR---HASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSE--YLKTVQSGTF 143 (299)
Q Consensus 69 ~~~VL~IG~G~G~~~~~l~~---~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~--~l~~~~~~~f 143 (299)
.++|+++|+ |.+++.+++ ..+..+|++++.+++-.+..+. .+++++..|..+ .+.+. -..+
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~-----------~~~~~~~~d~~~~~~~~~~-~~~~ 70 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNR-----------MGVATKQVDAKDEAGLAKA-LGGF 70 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHT-----------TTCEEEECCTTCHHHHHHH-TTTC
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHh-----------CCCcEEEecCCCHHHHHHH-HcCC
Confidence 358999998 455554432 2244679999999987765541 245556666532 23322 3478
Q ss_pred cEEEEcC
Q 037807 144 DAIIIDA 150 (299)
Q Consensus 144 DvIi~D~ 150 (299)
|+||...
T Consensus 71 d~vi~~~ 77 (118)
T 3ic5_A 71 DAVISAA 77 (118)
T ss_dssp SEEEECS
T ss_pred CEEEECC
Confidence 9999765
No 409
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=91.85 E-value=0.5 Score=42.69 Aligned_cols=103 Identities=12% Similarity=0.066 Sum_probs=63.7
Q ss_pred CCeEEEEeccc--cHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhh-----hcCCCC---------CCEEEEEccHH
Q 037807 69 PKKVLLIGGGD--GGILREISRHASVEQIHICEIDTMLINVYKEYFPEI-----AIGYED---------SRVILHVCDGS 132 (299)
Q Consensus 69 ~~~VL~IG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~-----~~~~~~---------~rv~v~~~D~~ 132 (299)
.++|-+||+|. ++++..+++.. -+|+++|.+++.++.+++..... ..+.-. .++++ ..|..
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G--~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~-~~~~~ 82 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGG--FRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTNLA 82 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT--CCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECCHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEE-eCCHH
Confidence 46899999985 34455555553 47999999999998886543211 011101 13443 34543
Q ss_pred HHHHhcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecC
Q 037807 133 EYLKTVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAE 184 (299)
Q Consensus 133 ~~l~~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~ 184 (299)
+.+ ...|+||...+... -...++|+.+...++++-+++.++.
T Consensus 83 eav-----~~aDlVieavpe~~-----~~k~~v~~~l~~~~~~~~Ii~s~tS 124 (319)
T 2dpo_A 83 EAV-----EGVVHIQECVPENL-----DLKRKIFAQLDSIVDDRVVLSSSSS 124 (319)
T ss_dssp HHT-----TTEEEEEECCCSCH-----HHHHHHHHHHHTTCCSSSEEEECCS
T ss_pred HHH-----hcCCEEEEeccCCH-----HHHHHHHHHHHhhCCCCeEEEEeCC
Confidence 333 45799998765431 0125778889999999888876553
No 410
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=91.69 E-value=1.6 Score=41.46 Aligned_cols=75 Identities=15% Similarity=0.275 Sum_probs=52.5
Q ss_pred CCCCeEEEEeccccHHHHHHHh-cCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHH--HHHhcCCCCc
Q 037807 67 PNPKKVLLIGGGDGGILREISR-HASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSE--YLKTVQSGTF 143 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~-~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~--~l~~~~~~~f 143 (299)
+..++|+++|+|. ++..+++ .....+|..+|.|++-.+...+.+ ++..++++|+.+ .|.+..-+..
T Consensus 233 ~~~~~v~I~GgG~--ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~l---------~~~~Vi~GD~td~~~L~ee~i~~~ 301 (461)
T 4g65_A 233 KPYRRIMIVGGGN--IGASLAKRLEQTYSVKLIERNLQRAEKLSEEL---------ENTIVFCGDAADQELLTEENIDQV 301 (461)
T ss_dssp SCCCEEEEECCSH--HHHHHHHHHTTTSEEEEEESCHHHHHHHHHHC---------TTSEEEESCTTCHHHHHHTTGGGC
T ss_pred ccccEEEEEcchH--HHHHHHHHhhhcCceEEEecCHHHHHHHHHHC---------CCceEEeccccchhhHhhcCchhh
Confidence 3468999999875 3334433 122357999999999888776655 367899999954 6665434789
Q ss_pred cEEEEcCCC
Q 037807 144 DAIIIDAFD 152 (299)
Q Consensus 144 DvIi~D~~~ 152 (299)
|+++.-..+
T Consensus 302 D~~ia~T~~ 310 (461)
T 4g65_A 302 DVFIALTNE 310 (461)
T ss_dssp SEEEECCSC
T ss_pred cEEEEcccC
Confidence 999975433
No 411
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=91.64 E-value=0.71 Score=43.85 Aligned_cols=70 Identities=14% Similarity=0.258 Sum_probs=49.7
Q ss_pred CCCeEEEEeccccHHHHHHHhcC--CccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHH--HHHHhcCCCCc
Q 037807 68 NPKKVLLIGGGDGGILREISRHA--SVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGS--EYLKTVQSGTF 143 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~--~~l~~~~~~~f 143 (299)
+..+|+++|+| .++..+++.- ....|++||.|++.++.+.+.+ .+.++.||+. +.|++..-+..
T Consensus 2 ~~M~iiI~G~G--~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~----------~~~~i~Gd~~~~~~L~~Agi~~a 69 (461)
T 4g65_A 2 NAMKIIILGAG--QVGGTLAENLVGENNDITIVDKDGDRLRELQDKY----------DLRVVNGHASHPDVLHEAGAQDA 69 (461)
T ss_dssp CCEEEEEECCS--HHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS----------SCEEEESCTTCHHHHHHHTTTTC
T ss_pred CcCEEEEECCC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc----------CcEEEEEcCCCHHHHHhcCCCcC
Confidence 34579999987 4555555422 2357999999999998776543 4678899995 45665545789
Q ss_pred cEEEEc
Q 037807 144 DAIIID 149 (299)
Q Consensus 144 DvIi~D 149 (299)
|+++.-
T Consensus 70 d~~ia~ 75 (461)
T 4g65_A 70 DMLVAV 75 (461)
T ss_dssp SEEEEC
T ss_pred CEEEEE
Confidence 998863
No 412
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=91.53 E-value=0.55 Score=44.96 Aligned_cols=103 Identities=19% Similarity=0.235 Sum_probs=63.9
Q ss_pred CCeEEEEeccc--cHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhh-cCCCC------------CCEEEEEccHHH
Q 037807 69 PKKVLLIGGGD--GGILREISRHASVEQIHICEIDTMLINVYKEYFPEIA-IGYED------------SRVILHVCDGSE 133 (299)
Q Consensus 69 ~~~VL~IG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~-~~~~~------------~rv~v~~~D~~~ 133 (299)
.++|-+||+|. ++++..+++.. .+|+++|++++.++.+++.+...- ...+. .+++.. .|. +
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG--~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~-~~~-~ 80 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHG--HQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPV-TDI-H 80 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT--CCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEE-CCG-G
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC--CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEe-CCH-H
Confidence 45799999985 34455555553 479999999999998876532210 00001 133332 332 1
Q ss_pred HHHhcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCC
Q 037807 134 YLKTVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAES 185 (299)
Q Consensus 134 ~l~~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s 185 (299)
-+ ...|+||.-.+... -...++|+.+.+.++++.++++++.+
T Consensus 81 ~~-----~~aDlVIeAVpe~~-----~vk~~v~~~l~~~~~~~~IlasntSt 122 (483)
T 3mog_A 81 AL-----AAADLVIEAASERL-----EVKKALFAQLAEVCPPQTLLTTNTSS 122 (483)
T ss_dssp GG-----GGCSEEEECCCCCH-----HHHHHHHHHHHHHSCTTCEEEECCSS
T ss_pred Hh-----cCCCEEEEcCCCcH-----HHHHHHHHHHHHhhccCcEEEecCCC
Confidence 12 34699998765431 01257888999999999998876643
No 413
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=91.51 E-value=0.48 Score=42.30 Aligned_cols=98 Identities=16% Similarity=0.285 Sum_probs=61.3
Q ss_pred CCCCeEEEEeccc--cHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCcc
Q 037807 67 PNPKKVLLIGGGD--GGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFD 144 (299)
Q Consensus 67 ~~~~~VL~IG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fD 144 (299)
...++|-+||+|. ++++..++ . + -+|+++|.+++.++.+++.+... . -.++++. .|..+ + ...|
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~la-a-G-~~V~v~d~~~~~~~~~~~~l~~~--~--~~~i~~~-~~~~~-~-----~~aD 75 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAIA-S-K-HEVVLQDVSEKALEAAREQIPEE--L--LSKIEFT-TTLEK-V-----KDCD 75 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHHH-T-T-SEEEEECSCHHHHHHHHHHSCGG--G--GGGEEEE-SSCTT-G-----GGCS
T ss_pred cCCCeEEEEeeCHHHHHHHHHHH-c-C-CEEEEEECCHHHHHHHHHHHHHH--H--hCCeEEe-CCHHH-H-----cCCC
Confidence 3568999999994 44666666 4 3 47999999999999888763110 0 0144432 34322 2 2469
Q ss_pred EEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCC
Q 037807 145 AIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAES 185 (299)
Q Consensus 145 vIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s 185 (299)
+||.-.++... ....+|+.+... ||.+++.++.+
T Consensus 76 lVieavpe~~~-----vk~~l~~~l~~~--~~~IlasntSt 109 (293)
T 1zej_A 76 IVMEAVFEDLN-----TKVEVLREVERL--TNAPLCSNTSV 109 (293)
T ss_dssp EEEECCCSCHH-----HHHHHHHHHHTT--CCSCEEECCSS
T ss_pred EEEEcCcCCHH-----HHHHHHHHHhcC--CCCEEEEECCC
Confidence 99987766421 124566666555 88888877644
No 414
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=91.44 E-value=0.16 Score=46.18 Aligned_cols=96 Identities=13% Similarity=0.050 Sum_probs=55.3
Q ss_pred CCCCeEEEEec--cccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCcc
Q 037807 67 PNPKKVLLIGG--GDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFD 144 (299)
Q Consensus 67 ~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fD 144 (299)
....+||++|+ |.|.++..+++..+..+|++++ +++-.+.++ +.. +.-+. ...|..+-+++...+.+|
T Consensus 141 ~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~--~ga------~~~~~-~~~~~~~~~~~~~~~g~D 210 (349)
T 4a27_A 141 REGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK--DSV------THLFD-RNADYVQEVKRISAEGVD 210 (349)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG--GGS------SEEEE-TTSCHHHHHHHHCTTCEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH--cCC------cEEEc-CCccHHHHHHHhcCCCce
Confidence 35689999997 3466667777765456788887 555455554 221 11111 223444555444356799
Q ss_pred EEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 145 AIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 145 vIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
+|+-....+ .++.+.+.|+++|.+++-.
T Consensus 211 vv~d~~g~~-----------~~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 211 IVLDCLCGD-----------NTGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp EEEEECC------------------CTTEEEEEEEEEEC
T ss_pred EEEECCCch-----------hHHHHHHHhhcCCEEEEEC
Confidence 998543221 1356778999999998743
No 415
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=91.39 E-value=1.5 Score=41.53 Aligned_cols=140 Identities=16% Similarity=0.161 Sum_probs=78.5
Q ss_pred CCCeEEEEeccccHH--HHHHHhcCCccEEEEEECCHHHHHHHHhhchhhh-cCC--------CCCCEEEEEccHHHHHH
Q 037807 68 NPKKVLLIGGGDGGI--LREISRHASVEQIHICEIDTMLINVYKEYFPEIA-IGY--------EDSRVILHVCDGSEYLK 136 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~--~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~-~~~--------~~~rv~v~~~D~~~~l~ 136 (299)
..-|+-+||.|.=++ +..+++.. -+|+++|+|++.++..++...... .++ ...++++ ..|..+-++
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~G--~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~-ttd~~ea~~ 83 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDFG--HEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSF-TTDLAEGVK 83 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHHHHT
T ss_pred CceEEEEEcCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEE-ECCHHHHHh
Confidence 456899999985443 34445542 479999999999887766311000 000 0123433 355544443
Q ss_pred hcCCCCccEEEEcCCCCCCC---CCCC-CcHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhhhcCCceeeeE
Q 037807 137 TVQSGTFDAIIIDAFDPIRP---GHDL-FEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHRIFKGSASYAW 212 (299)
Q Consensus 137 ~~~~~~fDvIi~D~~~~~~~---~~~l-~t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~~F~~~v~~~~ 212 (299)
..|+||+-.+.|... ...| +-.+.++.+.+.|++|-+++..++.+ +...+.+.+.+.+.... ..+..
T Consensus 84 -----~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~---pgtt~~l~~~l~e~~~~-~d~~v 154 (446)
T 4a7p_A 84 -----DADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTVP---VGTGDEVERIIAEVAPN-SGAKV 154 (446)
T ss_dssp -----TCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCCC---TTHHHHHHHHHHHHSTT-SCCEE
T ss_pred -----cCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCCC---chHHHHHHHHHHHhCCC-CCceE
Confidence 469999987666321 1111 23666788888999988877755332 23334444444444322 33344
Q ss_pred EeecccC
Q 037807 213 TTVPTYP 219 (299)
Q Consensus 213 ~~vP~~~ 219 (299)
..-|.+.
T Consensus 155 ~~~Pe~a 161 (446)
T 4a7p_A 155 VSNPEFL 161 (446)
T ss_dssp EECCCCC
T ss_pred EeCcccc
Confidence 5667763
No 416
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=90.90 E-value=11 Score=39.19 Aligned_cols=150 Identities=11% Similarity=0.095 Sum_probs=90.7
Q ss_pred CCeEEEEeccccHHHHHHHhcCCc-cEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHh----------
Q 037807 69 PKKVLLIGGGDGGILREISRHASV-EQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKT---------- 137 (299)
Q Consensus 69 ~~~VL~IG~G~G~~~~~l~~~~~~-~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~---------- 137 (299)
+.++++|-||.|++..-+.+. +. ..+.++|+|+...+..+.+++ ...++.+|..+++..
T Consensus 540 ~l~~iDLFaG~GGlslGl~~A-G~~~vv~avEid~~A~~ty~~N~p---------~~~~~~~DI~~l~~~~~~~di~~~~ 609 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQA-GISDTLWAIEMWDPAAQAFRLNNP---------GSTVFTEDCNILLKLVMAGETTNSR 609 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHH-TSEEEEEEECSSHHHHHHHHHHCT---------TSEEECSCHHHHHHHHHHTCSBCTT
T ss_pred CCeEEEeccCccHHHHHHHHC-CCCceEEEEECCHHHHHHHHHhCC---------CCccccccHHHHhhhccchhhhhhh
Confidence 457999999999999888765 44 567899999999998888765 456778887765421
Q ss_pred ---c-CCCCccEEEEcCCCCC-CCCCCC-----------CcHHHHHHHHHhcCCCcEEEEecCCccc--chHHHHHHHHH
Q 037807 138 ---V-QSGTFDAIIIDAFDPI-RPGHDL-----------FEGPFFELVAKALRPGGAMCIQAESLWF--QQFSVQHLIDD 199 (299)
Q Consensus 138 ---~-~~~~fDvIi~D~~~~~-~~~~~l-----------~t~ef~~~~~~~LkpgGvlv~~~~s~~~--~~~~~~~~~~~ 199 (299)
. ..+..|+|+..++-.. ...... .-.+|++ +.+.++|.-+++=|+..... ....+..+++.
T Consensus 610 ~~~lp~~~~vDll~GGpPCQ~FS~ag~~~~~~~~d~R~~L~~~~~r-iv~~~rPk~~llENV~glls~~~~~~~~~i~~~ 688 (1002)
T 3swr_A 610 GQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLS-YCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRC 688 (1002)
T ss_dssp CCBCCCTTTCSEEEECCCCTTCCSSSCCCHHHHHHHTTSHHHHHHH-HHHHHCCSEEEEEEEGGGGTTGGGHHHHHHHHH
T ss_pred hhhcccCCCeeEEEEcCCCcchhhhCCCCCCcccchhhHHHHHHHH-HHHHhCCCEEEEeccHHHhccCcchHHHHHHHH
Confidence 1 1246899998665321 111110 0123443 45568998877767643322 23456777777
Q ss_pred HhhhcCCceeeeEEeecccCC---cceeEEeccc
Q 037807 200 CHRIFKGSASYAWTTVPTYPS---GVIGFMLCST 230 (299)
Q Consensus 200 l~~~F~~~v~~~~~~vP~~~~---g~w~~~~ask 230 (299)
|.+.- ..+.+....--.|+- -.-.|++|++
T Consensus 689 L~~lG-Y~v~~~vLnA~dyGvPQ~R~R~fiva~r 721 (1002)
T 3swr_A 689 LVRMG-YQCTFGVLQAGQYGVAQTRRRAIILAAA 721 (1002)
T ss_dssp HHHHT-CEEEEEEEEGGGGTCSBCCEEEEEEEEC
T ss_pred HHhcC-CeEEEEEEEHHHCCCCccceEEEEEEEe
Confidence 76542 233332222222311 2355788876
No 417
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=90.71 E-value=0.34 Score=45.73 Aligned_cols=104 Identities=13% Similarity=0.118 Sum_probs=62.1
Q ss_pred CCCCeEEEEec--cccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEE----EccH------HHH
Q 037807 67 PNPKKVLLIGG--GDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILH----VCDG------SEY 134 (299)
Q Consensus 67 ~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~----~~D~------~~~ 134 (299)
....+||++|+ |-|.++..+++..+. ++++++.+++-.+.+++.-........+..+.+. ..|. .+-
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~Ga-~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~ 305 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGGA-NPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKR 305 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHH
Confidence 34678999996 456677778887654 7888889999999887742110000011111000 0111 122
Q ss_pred HHhc-CCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 135 LKTV-QSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 135 l~~~-~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
+++. ....+|+|+-... .+.++.+.+.|+++|.+++-
T Consensus 306 i~~~t~g~g~Dvvid~~G-----------~~~~~~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 306 IRELTGGEDIDIVFEHPG-----------RETFGASVFVTRKGGTITTC 343 (456)
T ss_dssp HHHHHTSCCEEEEEECSC-----------HHHHHHHHHHEEEEEEEEES
T ss_pred HHHHhCCCCCcEEEEcCC-----------chhHHHHHHHhhCCcEEEEE
Confidence 3322 2358998874321 35688889999999999874
No 418
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=90.70 E-value=0.76 Score=41.58 Aligned_cols=106 Identities=12% Similarity=0.087 Sum_probs=64.0
Q ss_pred CCCCeEEEEeccccHH--HHHHHhcCCccEEEEEECCHHHHHHHHhhchhh-----h-cCCCC--------CCEEEEEcc
Q 037807 67 PNPKKVLLIGGGDGGI--LREISRHASVEQIHICEIDTMLINVYKEYFPEI-----A-IGYED--------SRVILHVCD 130 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~--~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~-----~-~~~~~--------~rv~v~~~D 130 (299)
+...+|.+||+|+=+. +..++.. + -+|+.+|++++.++.+++++... . +.+.. .+++. ..|
T Consensus 4 p~~~~VaViGaG~MG~giA~~~a~~-G-~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~-~~~ 80 (319)
T 3ado_A 4 PAAGDVLIVGSGLVGRSWAMLFASG-G-FRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTN 80 (319)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHT-T-CCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECC
T ss_pred CCCCeEEEECCcHHHHHHHHHHHhC-C-CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhccc-ccc
Confidence 4567999999986333 3333444 3 57999999999988877654322 1 11111 12332 234
Q ss_pred HHHHHHhcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCC
Q 037807 131 GSEYLKTVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAES 185 (299)
Q Consensus 131 ~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s 185 (299)
..+.+ ...|+||=..+... -...++|+.+-+.++|+-+|..|+.+
T Consensus 81 l~~a~-----~~ad~ViEav~E~l-----~iK~~lf~~l~~~~~~~aIlaSNTSs 125 (319)
T 3ado_A 81 LAEAV-----EGVVHIQECVPENL-----DLKRKIFAQLDSIVDDRVVLSSSSSC 125 (319)
T ss_dssp HHHHT-----TTEEEEEECCCSCH-----HHHHHHHHHHHTTCCSSSEEEECCSS
T ss_pred hHhHh-----ccCcEEeeccccHH-----HHHHHHHHHHHHHhhhcceeehhhhh
Confidence 33332 34688884433321 12378999999999999999998744
No 419
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=90.67 E-value=0.33 Score=42.23 Aligned_cols=34 Identities=26% Similarity=0.302 Sum_probs=24.1
Q ss_pred CCeEEEEeccc-cHHHHHHHhcCCccEEEEEECCH
Q 037807 69 PKKVLLIGGGD-GGILREISRHASVEQIHICEIDT 102 (299)
Q Consensus 69 ~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~ 102 (299)
..+||++|+|+ |......+...++.+++.+|-|.
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 57999999985 33333334455788999998874
No 420
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=90.56 E-value=0.94 Score=39.77 Aligned_cols=104 Identities=14% Similarity=0.193 Sum_probs=62.9
Q ss_pred CCeEEEEecccc--HHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhh------c-CCCC-------CCEEEEEccHH
Q 037807 69 PKKVLLIGGGDG--GILREISRHASVEQIHICEIDTMLINVYKEYFPEIA------I-GYED-------SRVILHVCDGS 132 (299)
Q Consensus 69 ~~~VL~IG~G~G--~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~------~-~~~~-------~rv~v~~~D~~ 132 (299)
.++|.+||+|.= .++..+++. + .+|+++|.+++.++.+++.+.... . .... .+++. ..|..
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~-G-~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~ 80 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFH-G-FAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLA 80 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-CEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-CeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHH
Confidence 468999998852 233444444 3 479999999999888876532110 0 0000 12232 34433
Q ss_pred HHHHhcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCC
Q 037807 133 EYLKTVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAES 185 (299)
Q Consensus 133 ~~l~~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s 185 (299)
+.+ ...|+||.-.+.... ...++++.+...++++.+++.++.+
T Consensus 81 ~~~-----~~aDlVi~av~~~~~-----~~~~v~~~l~~~~~~~~il~s~tS~ 123 (283)
T 4e12_A 81 QAV-----KDADLVIEAVPESLD-----LKRDIYTKLGELAPAKTIFATNSST 123 (283)
T ss_dssp HHT-----TTCSEEEECCCSCHH-----HHHHHHHHHHHHSCTTCEEEECCSS
T ss_pred HHh-----ccCCEEEEeccCcHH-----HHHHHHHHHHhhCCCCcEEEECCCC
Confidence 332 357999987654310 1267788899999998888766533
No 421
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=90.45 E-value=1.6 Score=40.01 Aligned_cols=92 Identities=8% Similarity=0.128 Sum_probs=60.4
Q ss_pred CCeEEEEeccccH--HHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 69 PKKVLLIGGGDGG--ILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 69 ~~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
..+|.+||+|.=+ +++.+++.. .+|+++|.+++.++.+.+. .+. ...|..+.+... +..|+|
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G--~~V~v~dr~~~~~~~l~~~-----------g~~-~~~s~~e~~~~a--~~~DvV 85 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGG--HECVVYDLNVNAVQALERE-----------GIA-GARSIEEFCAKL--VKPRVV 85 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHTT-----------TCB-CCSSHHHHHHHS--CSSCEE
T ss_pred CCEEEEECchHHHHHHHHHHHhCC--CEEEEEeCCHHHHHHHHHC-----------CCE-EeCCHHHHHhcC--CCCCEE
Confidence 4689999987422 344444543 5799999999887766542 111 124556666543 457999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
|+-.+.+ ...+.++.+...|++|.+++-.+
T Consensus 86 i~~vp~~-------~v~~vl~~l~~~l~~g~iiId~s 115 (358)
T 4e21_A 86 WLMVPAA-------VVDSMLQRMTPLLAANDIVIDGG 115 (358)
T ss_dssp EECSCGG-------GHHHHHHHHGGGCCTTCEEEECS
T ss_pred EEeCCHH-------HHHHHHHHHHhhCCCCCEEEeCC
Confidence 9876654 23678888888898877766533
No 422
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=90.43 E-value=3.1 Score=37.10 Aligned_cols=68 Identities=15% Similarity=0.156 Sum_probs=42.6
Q ss_pred CeEEEEeccccH--HHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEE
Q 037807 70 KKVLLIGGGDGG--ILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAII 147 (299)
Q Consensus 70 ~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi 147 (299)
.+|.+||+|.-+ .+..+.++++.+-+-++|.+++..+...+.+ .+. ..|..+.+. +...|+|+
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~----------~~~--~~~~~~~l~---~~~~D~V~ 68 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAY----------GCE--VRTIDAIEA---AADIDAVV 68 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHT----------TCE--ECCHHHHHH---CTTCCEEE
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHh----------CCC--cCCHHHHhc---CCCCCEEE
Confidence 489999998522 2333445555443446899998766544432 123 577777776 34689999
Q ss_pred EcCCC
Q 037807 148 IDAFD 152 (299)
Q Consensus 148 ~D~~~ 152 (299)
+-.+.
T Consensus 69 i~tp~ 73 (331)
T 4hkt_A 69 ICTPT 73 (331)
T ss_dssp ECSCG
T ss_pred EeCCc
Confidence 86554
No 423
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=90.42 E-value=3.9 Score=34.93 Aligned_cols=78 Identities=13% Similarity=0.227 Sum_probs=47.5
Q ss_pred CCCeEEEEecccc-HHHH----HHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHH------HHH
Q 037807 68 NPKKVLLIGGGDG-GILR----EISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSE------YLK 136 (299)
Q Consensus 68 ~~~~VL~IG~G~G-~~~~----~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~------~l~ 136 (299)
+.++||+.|++++ ++++ .+++.. .+|++++.++...+.+++..... ...++.++..|..+ +++
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~ 79 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAG--ARLIFTYAGERLEKSVHELAGTL----DRNDSIILPCDVTNDAEIETCFA 79 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTT--CEEEEEESSGGGHHHHHHHHHTS----SSCCCEEEECCCSSSHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCC--CEEEEecCchHHHHHHHHHHHhc----CCCCceEEeCCCCCHHHHHHHHH
Confidence 4678999997643 2444 444442 57999998876655555543322 23478888888742 222
Q ss_pred hc--CCCCccEEEEcCC
Q 037807 137 TV--QSGTFDAIIIDAF 151 (299)
Q Consensus 137 ~~--~~~~fDvIi~D~~ 151 (299)
+. .-++.|++|....
T Consensus 80 ~~~~~~g~id~li~~Ag 96 (266)
T 3oig_A 80 SIKEQVGVIHGIAHCIA 96 (266)
T ss_dssp HHHHHHSCCCEEEECCC
T ss_pred HHHHHhCCeeEEEEccc
Confidence 11 1247899998654
No 424
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=90.16 E-value=2.8 Score=39.70 Aligned_cols=102 Identities=17% Similarity=0.255 Sum_probs=62.9
Q ss_pred CCeEEEEeccc--cHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhh-------h---c-CCCCCCEEEEEccHHHHH
Q 037807 69 PKKVLLIGGGD--GGILREISRHASVEQIHICEIDTMLINVYKEYFPEI-------A---I-GYEDSRVILHVCDGSEYL 135 (299)
Q Consensus 69 ~~~VL~IG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~-------~---~-~~~~~rv~v~~~D~~~~l 135 (299)
.++|.+||+|. ++++..+++. + .+|+++|++++.++.+++..... + . ..+....++ ..|. +-
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~-G-~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~-~~- 111 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARV-G-ISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSST-KE- 111 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-T-CEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCG-GG-
T ss_pred CCEEEEECcCHHHHHHHHHHHhC-C-CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCH-HH-
Confidence 36799999986 2344445554 3 47999999999988877643211 0 0 011122333 4553 21
Q ss_pred HhcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecC
Q 037807 136 KTVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAE 184 (299)
Q Consensus 136 ~~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~ 184 (299)
-...|+||.-.+... -...++++.+...++++.+++.++.
T Consensus 112 ----~~~aDlVIeaVpe~~-----~~k~~v~~~l~~~~~~~~ii~snTs 151 (463)
T 1zcj_A 112 ----LSTVDLVVEAVFEDM-----NLKKKVFAELSALCKPGAFLCTNTS 151 (463)
T ss_dssp ----GTTCSEEEECCCSCH-----HHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred ----HCCCCEEEEcCCCCH-----HHHHHHHHHHHhhCCCCeEEEeCCC
Confidence 145799998775420 0125678888899999988887553
No 425
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=90.05 E-value=2.3 Score=38.06 Aligned_cols=95 Identities=17% Similarity=0.084 Sum_probs=59.6
Q ss_pred CCeEEEEeccccHHHHHHHhcC--CccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHH--HHHhcCCCCcc
Q 037807 69 PKKVLLIGGGDGGILREISRHA--SVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSE--YLKTVQSGTFD 144 (299)
Q Consensus 69 ~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~--~l~~~~~~~fD 144 (299)
..+|+++|+ |..++.+++.- ... |+++|.|++.++ +++ ..+.++.+|+.+ .+++..-++.|
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~-----------~~~~~i~gd~~~~~~L~~a~i~~a~ 179 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKK-VLR-----------SGANFVHGDPTRVSDLEKANVRGAR 179 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH-----------TTCEEEESCTTSHHHHHHTCSTTEE
T ss_pred cCCEEEECC--cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh-----------CCcEEEEeCCCCHHHHHhcChhhcc
Confidence 357999997 46666666521 124 999999999887 553 257889999853 45544346899
Q ss_pred EEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCC
Q 037807 145 AIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAES 185 (299)
Q Consensus 145 vIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s 185 (299)
.|++-..+.. ..-..-...+.+.|+..++....+
T Consensus 180 ~vi~~~~~d~-------~n~~~~~~ar~~~~~~~iiar~~~ 213 (336)
T 1lnq_A 180 AVIVDLESDS-------ETIHCILGIRKIDESVRIIAEAER 213 (336)
T ss_dssp EEEECCSSHH-------HHHHHHHHHHTTCTTSEEEEECSS
T ss_pred EEEEcCCccH-------HHHHHHHHHHHHCCCCeEEEEECC
Confidence 9998654321 011223445667777666665433
No 426
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=89.99 E-value=2.6 Score=37.82 Aligned_cols=70 Identities=17% Similarity=0.157 Sum_probs=42.4
Q ss_pred CeEEEEeccccH--HHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEE
Q 037807 70 KKVLLIGGGDGG--ILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAII 147 (299)
Q Consensus 70 ~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi 147 (299)
.+|.+||+|.-+ .+..+.+.+...-+-++|.+++..+.+.+.+. +.-...|..+.+. ....|+|+
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~----------~~~~~~~~~~ll~---~~~~D~V~ 69 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLG----------VEKAYKDPHELIE---DPNVDAVL 69 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHT----------CSEEESSHHHHHH---CTTCCEEE
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhC----------CCceeCCHHHHhc---CCCCCEEE
Confidence 479999998533 23334445544333467999987665544332 1123567777776 34689999
Q ss_pred EcCCC
Q 037807 148 IDAFD 152 (299)
Q Consensus 148 ~D~~~ 152 (299)
+-.+.
T Consensus 70 i~tp~ 74 (344)
T 3ezy_A 70 VCSST 74 (344)
T ss_dssp ECSCG
T ss_pred EcCCC
Confidence 86554
No 427
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=89.88 E-value=1.5 Score=38.09 Aligned_cols=90 Identities=11% Similarity=0.038 Sum_probs=53.9
Q ss_pred CeEEEEecccc--HHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCC-CccEE
Q 037807 70 KKVLLIGGGDG--GILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSG-TFDAI 146 (299)
Q Consensus 70 ~~VL~IG~G~G--~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~-~fDvI 146 (299)
++|.+||+|.= .++..+.+.....+|+++|.+++.++.+++. . .. . . ...|..+.+ . ..|+|
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~-g-----~~-~--~-~~~~~~~~~-----~~~aDvV 66 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL-G-----II-D--E-GTTSIAKVE-----DFSPDFV 66 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT-T-----SC-S--E-EESCGGGGG-----GTCCSEE
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHC-C-----Cc-c--c-ccCCHHHHh-----cCCCCEE
Confidence 47999998752 2233344332123799999999888776642 1 00 1 1 123332222 3 57999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEE
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCI 181 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~ 181 (299)
++-.+... ..+.++.+...|+++.+++.
T Consensus 67 ilavp~~~-------~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 67 MLSSPVRT-------FREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp EECSCHHH-------HHHHHHHHHHHSCTTCEEEE
T ss_pred EEcCCHHH-------HHHHHHHHHhhCCCCcEEEE
Confidence 98765431 35677788888998876664
No 428
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=89.80 E-value=1.4 Score=36.37 Aligned_cols=99 Identities=15% Similarity=0.086 Sum_probs=55.6
Q ss_pred eEEEEeccccHHHHHHHhcC--CccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEEE
Q 037807 71 KVLLIGGGDGGILREISRHA--SVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAIII 148 (299)
Q Consensus 71 ~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi~ 148 (299)
+||+.|+ +|.+++++++.. ...+|+++..++.-.+.. ..++++++.+|..+.-.+. -+..|+||.
T Consensus 2 kilVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-----------~~~~~~~~~~D~~d~~~~~-~~~~d~vi~ 68 (224)
T 3h2s_A 2 KIAVLGA-TGRAGSAIVAEARRRGHEVLAVVRDPQKAADR-----------LGATVATLVKEPLVLTEAD-LDSVDAVVD 68 (224)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----------TCTTSEEEECCGGGCCHHH-HTTCSEEEE
T ss_pred EEEEEcC-CCHHHHHHHHHHHHCCCEEEEEEecccccccc-----------cCCCceEEecccccccHhh-cccCCEEEE
Confidence 6888885 466666655421 125899999988654321 1357899999986532111 246899998
Q ss_pred cCCCCCCCCCCCCcHHHHHHHHHhcCC-CcEEEEe
Q 037807 149 DAFDPIRPGHDLFEGPFFELVAKALRP-GGAMCIQ 182 (299)
Q Consensus 149 D~~~~~~~~~~l~t~ef~~~~~~~Lkp-gGvlv~~ 182 (299)
.....+.+..........+.+.+.++. |+.++.-
T Consensus 69 ~ag~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~ 103 (224)
T 3h2s_A 69 ALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFI 103 (224)
T ss_dssp CCCCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEE
T ss_pred CCccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEE
Confidence 664432111111123334555555554 3455543
No 429
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=89.71 E-value=7.6 Score=33.91 Aligned_cols=76 Identities=14% Similarity=0.238 Sum_probs=47.1
Q ss_pred CCCeEEEEecccc-HHH----HHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHH------HHH
Q 037807 68 NPKKVLLIGGGDG-GIL----REISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSE------YLK 136 (299)
Q Consensus 68 ~~~~VL~IG~G~G-~~~----~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~------~l~ 136 (299)
+.+.||+.|+++| +++ +.+++.. .+|++++.++...+.+++..... .++.++..|..+ +++
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G--~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~ 101 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAG--AELAFTYQGDALKKRVEPLAEEL------GAFVAGHCDVADAASIDAVFE 101 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTT--CEEEEEECSHHHHHHHHHHHHHH------TCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHHHHHhc------CCceEEECCCCCHHHHHHHHH
Confidence 4578999998754 344 4444443 57999999976655555443322 357888888743 222
Q ss_pred hc--CCCCccEEEEcCC
Q 037807 137 TV--QSGTFDAIIIDAF 151 (299)
Q Consensus 137 ~~--~~~~fDvIi~D~~ 151 (299)
+. .-++.|++|.+..
T Consensus 102 ~~~~~~g~iD~lVnnAG 118 (293)
T 3grk_A 102 TLEKKWGKLDFLVHAIG 118 (293)
T ss_dssp HHHHHTSCCSEEEECCC
T ss_pred HHHHhcCCCCEEEECCc
Confidence 11 1357999998764
No 430
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=89.69 E-value=4.2 Score=34.20 Aligned_cols=76 Identities=16% Similarity=0.175 Sum_probs=49.4
Q ss_pred CCCeEEEEeccccHHHHHHH----hcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHH------HHHh
Q 037807 68 NPKKVLLIGGGDGGILREIS----RHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSE------YLKT 137 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~----~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~------~l~~ 137 (299)
+.++||+.|++ |+++++++ ++ + .+|++++.+++-.+...+.+... ..++.++..|..+ ++++
T Consensus 4 ~~k~vlITGas-~gIG~~~a~~l~~~-G-~~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~ 75 (247)
T 3lyl_A 4 NEKVALVTGAS-RGIGFEVAHALASK-G-ATVVGTATSQASAEKFENSMKEK-----GFKARGLVLNISDIESIQNFFAE 75 (247)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHT-T-CEEEEEESSHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHHHHhc-----CCceEEEEecCCCHHHHHHHHHH
Confidence 35678888865 55555544 44 2 57999999998777666655432 3578888888743 2221
Q ss_pred c--CCCCccEEEEcCC
Q 037807 138 V--QSGTFDAIIIDAF 151 (299)
Q Consensus 138 ~--~~~~fDvIi~D~~ 151 (299)
. ..++.|++|....
T Consensus 76 ~~~~~~~id~li~~Ag 91 (247)
T 3lyl_A 76 IKAENLAIDILVNNAG 91 (247)
T ss_dssp HHHTTCCCSEEEECCC
T ss_pred HHHHcCCCCEEEECCC
Confidence 1 1357899998764
No 431
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=89.69 E-value=6.3 Score=35.51 Aligned_cols=108 Identities=15% Similarity=0.114 Sum_probs=56.8
Q ss_pred CCCeEEEEeccccHH--HHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccE
Q 037807 68 NPKKVLLIGGGDGGI--LREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDA 145 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~--~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDv 145 (299)
++.+|.+||+|.=+. +..++...-..+++.+|++++.++--..-+... ..+...++++..+|.. .. ...|+
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~-~~~~~~~v~i~~~~~~----a~--~~aDv 76 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHG-KAFAPQPVKTSYGTYE----DC--KDADI 76 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHT-GGGSSSCCEEEEECGG----GG--TTCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhc-cccccCCeEEEeCcHH----Hh--CCCCE
Confidence 467899999864222 223334433458999999998665421111110 0111235666666532 12 45799
Q ss_pred EEEcCCCCCCCCC---CCC--cHHHHHHHHHh---cCCCcEEEEe
Q 037807 146 IIIDAFDPIRPGH---DLF--EGPFFELVAKA---LRPGGAMCIQ 182 (299)
Q Consensus 146 Ii~D~~~~~~~~~---~l~--t~ef~~~~~~~---LkpgGvlv~~ 182 (299)
||+-...|..+.. .|+ +...++.+.+. ..|++++++-
T Consensus 77 Vvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvv 121 (326)
T 3pqe_A 77 VCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVA 121 (326)
T ss_dssp EEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred EEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEc
Confidence 9997655544432 111 12233333222 4789987763
No 432
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=89.65 E-value=2.8 Score=37.76 Aligned_cols=71 Identities=18% Similarity=0.274 Sum_probs=45.6
Q ss_pred CCCeEEEEeccccH--HHHHHHhc-CCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCcc
Q 037807 68 NPKKVLLIGGGDGG--ILREISRH-ASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFD 144 (299)
Q Consensus 68 ~~~~VL~IG~G~G~--~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fD 144 (299)
++.+|.+||+|.=+ .+..+.++ ++.+-+-++|.+++..+.+.+.+. + -...|..+.+.+ ...|
T Consensus 12 ~~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~----------~-~~~~~~~~ll~~---~~~D 77 (354)
T 3q2i_A 12 RKIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTG----------A-RGHASLTDMLAQ---TDAD 77 (354)
T ss_dssp SCEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHC----------C-EEESCHHHHHHH---CCCS
T ss_pred CcceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcC----------C-ceeCCHHHHhcC---CCCC
Confidence 46789999998422 34445556 444444578999987765544321 2 245777777763 4689
Q ss_pred EEEEcCCC
Q 037807 145 AIIIDAFD 152 (299)
Q Consensus 145 vIi~D~~~ 152 (299)
+|++-.+.
T Consensus 78 ~V~i~tp~ 85 (354)
T 3q2i_A 78 IVILTTPS 85 (354)
T ss_dssp EEEECSCG
T ss_pred EEEECCCc
Confidence 99986554
No 433
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=89.63 E-value=1.1 Score=43.02 Aligned_cols=87 Identities=21% Similarity=0.167 Sum_probs=52.6
Q ss_pred CCCeEEEEeccccH-HHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 68 NPKKVLLIGGGDGG-ILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 68 ~~~~VL~IG~G~G~-~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
..++|+++|+|.=+ .....++..+ .+|+++|.++.-.+.+++. .+++ .+..+.+ ...|+|
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~G-a~Viv~d~~~~~~~~A~~~-----------Ga~~--~~l~e~l-----~~aDvV 333 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQG-ARVSVTEIDPINALQAMME-----------GFDV--VTVEEAI-----GDADIV 333 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCHHHHHHHHHT-----------TCEE--CCHHHHG-----GGCSEE
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc-----------CCEE--ecHHHHH-----hCCCEE
Confidence 56899999986422 2233344445 4899999999887766542 1111 2333333 357999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
+.-...+ .+... ...+.|++||+++.-
T Consensus 334 i~atgt~-----~~i~~----~~l~~mk~ggilvnv 360 (494)
T 3ce6_A 334 VTATGNK-----DIIML----EHIKAMKDHAILGNI 360 (494)
T ss_dssp EECSSSS-----CSBCH----HHHHHSCTTCEEEEC
T ss_pred EECCCCH-----HHHHH----HHHHhcCCCcEEEEe
Confidence 9764322 23332 345668999988753
No 434
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=89.60 E-value=3.4 Score=35.27 Aligned_cols=78 Identities=19% Similarity=0.303 Sum_probs=50.0
Q ss_pred CCCeEEEEec-cccH---HHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHH------HHHh
Q 037807 68 NPKKVLLIGG-GDGG---ILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSE------YLKT 137 (299)
Q Consensus 68 ~~~~VL~IG~-G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~------~l~~ 137 (299)
+.++||+.|+ |.|. +++.+++.. .+|++++.+++-.+...+.+... ...++.++..|..+ ++++
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dl~~~~~v~~~~~~ 94 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEG--ADVVISDYHERRLGETRDQLADL----GLGRVEAVVCDVTSTEAVDALITQ 94 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHTT----CSSCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCC--CEEEEecCCHHHHHHHHHHHHhc----CCCceEEEEeCCCCHHHHHHHHHH
Confidence 4678999987 4332 344444553 57999999998777666655432 24589999998743 2221
Q ss_pred c--CCCCccEEEEcCC
Q 037807 138 V--QSGTFDAIIIDAF 151 (299)
Q Consensus 138 ~--~~~~fDvIi~D~~ 151 (299)
. .-++.|++|....
T Consensus 95 ~~~~~g~id~li~~Ag 110 (266)
T 3o38_A 95 TVEKAGRLDVLVNNAG 110 (266)
T ss_dssp HHHHHSCCCEEEECCC
T ss_pred HHHHhCCCcEEEECCC
Confidence 1 0247899998764
No 435
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=89.58 E-value=0.63 Score=42.52 Aligned_cols=34 Identities=29% Similarity=0.388 Sum_probs=24.2
Q ss_pred CCeEEEEeccc-cHHHHHHHhcCCccEEEEEECCH
Q 037807 69 PKKVLLIGGGD-GGILREISRHASVEQIHICEIDT 102 (299)
Q Consensus 69 ~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~ 102 (299)
..+||++|+|+ |......+...++.+++.||-|.
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 67999999985 33333333345789999999875
No 436
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=89.56 E-value=4.9 Score=34.14 Aligned_cols=79 Identities=14% Similarity=0.140 Sum_probs=48.2
Q ss_pred CCCeEEEEeccccHHHHHHHhcC--CccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccH--H------HHHHh
Q 037807 68 NPKKVLLIGGGDGGILREISRHA--SVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDG--S------EYLKT 137 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~--~------~~l~~ 137 (299)
+.+.||+.|++ |++++++++.. ...+|++++.+++-++...+.+.... ..++.++..|. . +.+++
T Consensus 11 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (252)
T 3f1l_A 11 NDRIILVTGAS-DGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET----GRQPQWFILDLLTCTSENCQQLAQR 85 (252)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH----SCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc----CCCceEEEEecccCCHHHHHHHHHH
Confidence 35678888865 55655554321 12579999999887776665554331 23677777776 1 12221
Q ss_pred c--CCCCccEEEEcCC
Q 037807 138 V--QSGTFDAIIIDAF 151 (299)
Q Consensus 138 ~--~~~~fDvIi~D~~ 151 (299)
. .-++.|++|.+..
T Consensus 86 ~~~~~g~id~lv~nAg 101 (252)
T 3f1l_A 86 IAVNYPRLDGVLHNAG 101 (252)
T ss_dssp HHHHCSCCSEEEECCC
T ss_pred HHHhCCCCCEEEECCc
Confidence 1 1357999998764
No 437
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=89.51 E-value=3.4 Score=37.12 Aligned_cols=73 Identities=14% Similarity=0.078 Sum_probs=47.1
Q ss_pred CCCCeEEEEeccc--cH-HHHHHHhc-CCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCC
Q 037807 67 PNPKKVLLIGGGD--GG-ILREISRH-ASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGT 142 (299)
Q Consensus 67 ~~~~~VL~IG~G~--G~-~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~ 142 (299)
.++.+|.+||+|. |. .+..+.+. +..+-+-++|.|++..+.+.+.++ .+ -...|..+.+. +..
T Consensus 16 ~~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~-------~~---~~~~~~~~ll~---~~~ 82 (340)
T 1zh8_A 16 LRKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVG-------NP---AVFDSYEELLE---SGL 82 (340)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHS-------SC---EEESCHHHHHH---SSC
T ss_pred CCceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhC-------CC---cccCCHHHHhc---CCC
Confidence 3567999999993 33 34455555 445445678999987765444332 11 24578777776 356
Q ss_pred ccEEEEcCCC
Q 037807 143 FDAIIIDAFD 152 (299)
Q Consensus 143 fDvIi~D~~~ 152 (299)
.|+|++-.+.
T Consensus 83 vD~V~i~tp~ 92 (340)
T 1zh8_A 83 VDAVDLTLPV 92 (340)
T ss_dssp CSEEEECCCG
T ss_pred CCEEEEeCCc
Confidence 8999986654
No 438
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=89.48 E-value=0.46 Score=43.25 Aligned_cols=94 Identities=10% Similarity=0.056 Sum_probs=56.4
Q ss_pred CCCCeEEEEeccc-cHHHHHHHhcC-CccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEc--cHHHHHHhcCC-C
Q 037807 67 PNPKKVLLIGGGD-GGILREISRHA-SVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVC--DGSEYLKTVQS-G 141 (299)
Q Consensus 67 ~~~~~VL~IG~G~-G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~--D~~~~l~~~~~-~ 141 (299)
....+||++|+|. |..+..+++.. +. +|++++.+++-.+.+++. .. + .++.. +..+.+++... .
T Consensus 185 ~~g~~VlV~GaG~vG~~avqlak~~~Ga-~Vi~~~~~~~~~~~~~~l-Ga------~---~vi~~~~~~~~~v~~~~~g~ 253 (359)
T 1h2b_A 185 YPGAYVAIVGVGGLGHIAVQLLKVMTPA-TVIALDVKEEKLKLAERL-GA------D---HVVDARRDPVKQVMELTRGR 253 (359)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCC-EEEEEESSHHHHHHHHHT-TC------S---EEEETTSCHHHHHHHHTTTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEeCCHHHHHHHHHh-CC------C---EEEeccchHHHHHHHHhCCC
Confidence 3568999999753 33455666754 54 799999999999988863 21 1 11111 12233433322 3
Q ss_pred CccEEEEcCCCCCCCCCCCCcHH--HHHHHHHhcCCCcEEEEec
Q 037807 142 TFDAIIIDAFDPIRPGHDLFEGP--FFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 142 ~fDvIi~D~~~~~~~~~~l~t~e--f~~~~~~~LkpgGvlv~~~ 183 (299)
.+|+|+-.... .+ .++.+.+. ++|.++.-.
T Consensus 254 g~Dvvid~~G~----------~~~~~~~~~~~~--~~G~~v~~g 285 (359)
T 1h2b_A 254 GVNVAMDFVGS----------QATVDYTPYLLG--RMGRLIIVG 285 (359)
T ss_dssp CEEEEEESSCC----------HHHHHHGGGGEE--EEEEEEECC
T ss_pred CCcEEEECCCC----------chHHHHHHHhhc--CCCEEEEEe
Confidence 79999843321 33 45555555 899888743
No 439
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=89.40 E-value=3 Score=34.86 Aligned_cols=71 Identities=8% Similarity=0.145 Sum_probs=45.5
Q ss_pred CeEEEEeccccHHHHHHHhc---CCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHH------HHHhcCC
Q 037807 70 KKVLLIGGGDGGILREISRH---ASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSE------YLKTVQS 140 (299)
Q Consensus 70 ~~VL~IG~G~G~~~~~l~~~---~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~------~l~~~~~ 140 (299)
++||+.|++ |++++++++. .+ .+|++++.+++-++...+.+ ..++.++..|..+ .+++. .
T Consensus 2 k~vlVTGas-~gIG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~D~~~~~~v~~~~~~~-~ 70 (230)
T 3guy_A 2 SLIVITGAS-SGLGAELAKLYDAEG-KATYLTGRSESKLSTVTNCL--------SNNVGYRARDLASHQEVEQLFEQL-D 70 (230)
T ss_dssp -CEEEESTT-SHHHHHHHHHHHHTT-CCEEEEESCHHHHHHHHHTC--------SSCCCEEECCTTCHHHHHHHHHSC-S
T ss_pred CEEEEecCC-chHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHH--------hhccCeEeecCCCHHHHHHHHHHH-h
Confidence 458888866 5566655442 23 56999999998877666544 2466777777643 33333 4
Q ss_pred CCccEEEEcCC
Q 037807 141 GTFDAIIIDAF 151 (299)
Q Consensus 141 ~~fDvIi~D~~ 151 (299)
+.+|++|....
T Consensus 71 ~~~d~lv~~Ag 81 (230)
T 3guy_A 71 SIPSTVVHSAG 81 (230)
T ss_dssp SCCSEEEECCC
T ss_pred hcCCEEEEeCC
Confidence 56799998654
No 440
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=89.39 E-value=3.4 Score=36.99 Aligned_cols=109 Identities=19% Similarity=0.261 Sum_probs=58.3
Q ss_pred CCCeEEEEeccccHHHHH--HHhcCCccEEEEEECCHHHHHH-HHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCcc
Q 037807 68 NPKKVLLIGGGDGGILRE--ISRHASVEQIHICEIDTMLINV-YKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFD 144 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~--l~~~~~~~~v~~VEid~~vi~~-a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fD 144 (299)
++.+|.+||+|.-+.+.. ++......++..+|++++.++- +.. +... ..+...++++..++ .+-+ ...|
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~d-l~~~-~~~~~~~~~v~~~~-~~a~-----~~aD 76 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMD-LKHA-TPYSPTTVRVKAGE-YSDC-----HDAD 76 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHH-HHHH-GGGSSSCCEEEECC-GGGG-----TTCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhh-HHhh-hhhcCCCeEEEeCC-HHHh-----CCCC
Confidence 356899999876554332 2333334689999999875552 222 1111 11112345665544 2212 3479
Q ss_pred EEEEcCCCCCCCCCC-----CCcHHHHHHH----HHhcCCCcEEEEecCCc
Q 037807 145 AIIIDAFDPIRPGHD-----LFEGPFFELV----AKALRPGGAMCIQAESL 186 (299)
Q Consensus 145 vIi~D~~~~~~~~~~-----l~t~ef~~~~----~~~LkpgGvlv~~~~s~ 186 (299)
+||+-...|..+... ..+...++.+ .+. +|++++++ ..+|
T Consensus 77 vVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv-~tNP 125 (317)
T 3d0o_A 77 LVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMAS-KFDGIFLV-ATNP 125 (317)
T ss_dssp EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEE-CSSS
T ss_pred EEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEE-ecCc
Confidence 999877655443211 1112333333 333 89999887 3344
No 441
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=89.31 E-value=2.1 Score=38.62 Aligned_cols=72 Identities=13% Similarity=0.113 Sum_probs=43.4
Q ss_pred CCCeEEEEeccccH--HHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccE
Q 037807 68 NPKKVLLIGGGDGG--ILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDA 145 (299)
Q Consensus 68 ~~~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDv 145 (299)
.+.+|.+||+|.-+ .+..+.+.++.+-+.++|.+++..+...+.+. -+ . ..|..+.+. +...|+
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g-------~~---~-~~~~~~~l~---~~~~D~ 69 (354)
T 3db2_A 4 NPVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYN-------CA---G-DATMEALLA---REDVEM 69 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHT-------CC---C-CSSHHHHHH---CSSCCE
T ss_pred CcceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcC-------CC---C-cCCHHHHhc---CCCCCE
Confidence 35689999998522 23333345444434477999987765444321 11 1 467777775 356899
Q ss_pred EEEcCCCC
Q 037807 146 IIIDAFDP 153 (299)
Q Consensus 146 Ii~D~~~~ 153 (299)
|++-.+..
T Consensus 70 V~i~tp~~ 77 (354)
T 3db2_A 70 VIITVPND 77 (354)
T ss_dssp EEECSCTT
T ss_pred EEEeCChH
Confidence 99876554
No 442
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=89.30 E-value=2.9 Score=38.17 Aligned_cols=98 Identities=9% Similarity=0.105 Sum_probs=60.1
Q ss_pred CCeEEEEeccccHH--HHHHHhcCCccEEEEEECCHHHHHHHHhhchhh----hcCCCCCCEEEEEccHHHHHHhcCCCC
Q 037807 69 PKKVLLIGGGDGGI--LREISRHASVEQIHICEIDTMLINVYKEYFPEI----AIGYEDSRVILHVCDGSEYLKTVQSGT 142 (299)
Q Consensus 69 ~~~VL~IG~G~G~~--~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~----~~~~~~~rv~v~~~D~~~~l~~~~~~~ 142 (299)
..+|.+||+|.=+. +..+++. + .+|++++.+++.++..++.-... +..+ .+++++ ..|..+.+ +.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~-G-~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l-~~~i~~-t~d~~ea~-----~~ 99 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARK-G-QKVRLWSYESDHVDEMQAEGVNNRYLPNYPF-PETLKA-YCDLKASL-----EG 99 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTT-T-CCEEEECSCHHHHHHHHHHSSBTTTBTTCCC-CTTEEE-ESCHHHHH-----TT
T ss_pred CCeEEEECccHHHHHHHHHHHHC-C-CeEEEEeCCHHHHHHHHHcCCCcccCCCCcc-CCCeEE-ECCHHHHH-----hc
Confidence 46899999986443 3334443 2 47999999999888766531100 0011 223443 34554443 34
Q ss_pred ccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 143 FDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 143 fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
.|+||+-.+.. ...+.++.+...|+++-+++.-
T Consensus 100 aDvVilaVp~~-------~~~~vl~~i~~~l~~~~ivvs~ 132 (356)
T 3k96_A 100 VTDILIVVPSF-------AFHEVITRMKPLIDAKTRIAWG 132 (356)
T ss_dssp CCEEEECCCHH-------HHHHHHHHHGGGCCTTCEEEEC
T ss_pred CCEEEECCCHH-------HHHHHHHHHHHhcCCCCEEEEE
Confidence 79999876442 2467788888889887766643
No 443
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=89.20 E-value=0.21 Score=44.84 Aligned_cols=90 Identities=14% Similarity=0.214 Sum_probs=56.1
Q ss_pred eEEEEec--cccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHH--HHHHhcCCCCccEE
Q 037807 71 KVLLIGG--GDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGS--EYLKTVQSGTFDAI 146 (299)
Q Consensus 71 ~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~--~~l~~~~~~~fDvI 146 (299)
+||++|+ |-|..+..+++..+. +|++++.+++-.+.+++. .. + .++..+-. +.+++...+.+|+|
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~l-Ga------~---~v~~~~~~~~~~~~~~~~~~~d~v 221 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQL-GA------S---EVISREDVYDGTLKALSKQQWQGA 221 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHH-TC------S---EEEEHHHHCSSCCCSSCCCCEEEE
T ss_pred eEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc-CC------c---EEEECCCchHHHHHHhhcCCccEE
Confidence 7999996 556667777776554 699999998888888763 21 1 11111100 11111113469988
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
+-... .+.+..+.+.|+++|.++.-
T Consensus 222 id~~g-----------~~~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 222 VDPVG-----------GKQLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp EESCC-----------THHHHHHHTTEEEEEEEEEC
T ss_pred EECCc-----------HHHHHHHHHhhcCCCEEEEE
Confidence 74321 13577888999999999874
No 444
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=89.15 E-value=4.3 Score=36.59 Aligned_cols=71 Identities=20% Similarity=0.124 Sum_probs=43.8
Q ss_pred CCCeEEEEeccccH---HHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCcc
Q 037807 68 NPKKVLLIGGGDGG---ILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFD 144 (299)
Q Consensus 68 ~~~~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fD 144 (299)
++.+|.+||+|.=+ .+..+.+.++.+-+-++|.+++..+...+.+ .+... .|..+.+. +...|
T Consensus 26 ~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~----------g~~~~-~~~~~ll~---~~~~D 91 (350)
T 3rc1_A 26 NPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERF----------GGEPV-EGYPALLE---RDDVD 91 (350)
T ss_dssp CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHH----------CSEEE-ESHHHHHT---CTTCS
T ss_pred CceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHc----------CCCCc-CCHHHHhc---CCCCC
Confidence 35689999998533 2344555655443447799987665443332 12333 77777765 35689
Q ss_pred EEEEcCCC
Q 037807 145 AIIIDAFD 152 (299)
Q Consensus 145 vIi~D~~~ 152 (299)
+|++-.+.
T Consensus 92 ~V~i~tp~ 99 (350)
T 3rc1_A 92 AVYVPLPA 99 (350)
T ss_dssp EEEECCCG
T ss_pred EEEECCCc
Confidence 99986544
No 445
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=88.99 E-value=1.4 Score=39.72 Aligned_cols=76 Identities=20% Similarity=0.257 Sum_probs=50.4
Q ss_pred CCCeEEEEeccccHHHHHHHh----cCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHH--HHhcCCC
Q 037807 68 NPKKVLLIGGGDGGILREISR----HASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEY--LKTVQSG 141 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~----~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~--l~~~~~~ 141 (299)
+.++||+.| |+|.+++++++ .++..+|++++.++.-.+..++.+. .++++++.+|..+. +.+. -+
T Consensus 20 ~~k~vlVTG-atG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~-------~~~v~~~~~Dl~d~~~l~~~-~~ 90 (344)
T 2gn4_A 20 DNQTILITG-GTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN-------DPRMRFFIGDVRDLERLNYA-LE 90 (344)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC-------CTTEEEEECCTTCHHHHHHH-TT
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc-------CCCEEEEECCCCCHHHHHHH-Hh
Confidence 457899888 45777776654 3233489999999876554444332 36899999998653 3333 34
Q ss_pred CccEEEEcCCC
Q 037807 142 TFDAIIIDAFD 152 (299)
Q Consensus 142 ~fDvIi~D~~~ 152 (299)
..|+||..+..
T Consensus 91 ~~D~Vih~Aa~ 101 (344)
T 2gn4_A 91 GVDICIHAAAL 101 (344)
T ss_dssp TCSEEEECCCC
T ss_pred cCCEEEECCCC
Confidence 68999986643
No 446
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=88.92 E-value=5.5 Score=29.28 Aligned_cols=79 Identities=19% Similarity=0.218 Sum_probs=51.0
Q ss_pred ccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHH
Q 037807 92 VEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAK 171 (299)
Q Consensus 92 ~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~ 171 (299)
..+|..||-|+...+..++.+... .-.+ ....++.+.+.......+|+|++|..-+... ..++++.+++
T Consensus 7 ~~~ilivdd~~~~~~~l~~~L~~~-----g~~v-~~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~-----g~~~~~~l~~ 75 (130)
T 3eod_A 7 GKQILIVEDEQVFRSLLDSWFSSL-----GATT-VLAADGVDALELLGGFTPDLMICDIAMPRMN-----GLKLLEHIRN 75 (130)
T ss_dssp TCEEEEECSCHHHHHHHHHHHHHT-----TCEE-EEESCHHHHHHHHTTCCCSEEEECCC----------CHHHHHHHHH
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhC-----CceE-EEeCCHHHHHHHHhcCCCCEEEEecCCCCCC-----HHHHHHHHHh
Confidence 357999999999998888877654 1123 3466777766655457799999997654321 2678888887
Q ss_pred hcCCCcEEEE
Q 037807 172 ALRPGGAMCI 181 (299)
Q Consensus 172 ~LkpgGvlv~ 181 (299)
.-..--++++
T Consensus 76 ~~~~~~ii~~ 85 (130)
T 3eod_A 76 RGDQTPVLVI 85 (130)
T ss_dssp TTCCCCEEEE
T ss_pred cCCCCCEEEE
Confidence 5433334444
No 447
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=88.81 E-value=4.8 Score=30.63 Aligned_cols=78 Identities=14% Similarity=0.241 Sum_probs=52.2
Q ss_pred cEEEEEECCHHHHHHHHhhchhhhcCCCCCCE-EEEEccHHHHHHhcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHH
Q 037807 93 EQIHICEIDTMLINVYKEYFPEIAIGYEDSRV-ILHVCDGSEYLKTVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAK 171 (299)
Q Consensus 93 ~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv-~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~ 171 (299)
.+|..||-|+...+..++.+... .... -....++.+.+.......+|+|++|..-+... ..++++.+++
T Consensus 21 ~~iLivdd~~~~~~~l~~~L~~~-----~~~~~v~~~~~~~~al~~l~~~~~dlii~D~~l~~~~-----g~~~~~~l~~ 90 (150)
T 4e7p_A 21 MKVLVAEDQSMLRDAMCQLLTLQ-----PDVESVLQAKNGQEAIQLLEKESVDIAILDVEMPVKT-----GLEVLEWIRS 90 (150)
T ss_dssp EEEEEECSCHHHHHHHHHHHHTS-----TTEEEEEEESSHHHHHHHHTTSCCSEEEECSSCSSSC-----HHHHHHHHHH
T ss_pred cEEEEEcCCHHHHHHHHHHHHhC-----CCcEEEEEECCHHHHHHHhhccCCCEEEEeCCCCCCc-----HHHHHHHHHH
Confidence 57999999999999888887642 1112 33456777666654457799999997655321 2677888877
Q ss_pred hcCCCcEEEE
Q 037807 172 ALRPGGAMCI 181 (299)
Q Consensus 172 ~LkpgGvlv~ 181 (299)
. .++-.+++
T Consensus 91 ~-~~~~~ii~ 99 (150)
T 4e7p_A 91 E-KLETKVVV 99 (150)
T ss_dssp T-TCSCEEEE
T ss_pred h-CCCCeEEE
Confidence 5 45544444
No 448
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=88.80 E-value=4.9 Score=34.82 Aligned_cols=78 Identities=15% Similarity=0.183 Sum_probs=48.4
Q ss_pred CCCeEEEEeccccHHHHHHHhcC--CccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHH------HHhc-
Q 037807 68 NPKKVLLIGGGDGGILREISRHA--SVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEY------LKTV- 138 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~------l~~~- 138 (299)
..+.||+.|++ |++++++++.. ...+|++++.+++-++...+.+... ..++.++..|..+. +++.
T Consensus 23 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~ 96 (279)
T 3sju_A 23 RPQTAFVTGVS-SGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA-----GHDVDGSSCDVTSTDEVHAAVAAAV 96 (279)
T ss_dssp --CEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEECCCCCHHHHHHHHHHHH
Confidence 35678888865 55655554311 1257999999998777666655432 45788888887432 2211
Q ss_pred -CCCCccEEEEcCC
Q 037807 139 -QSGTFDAIIIDAF 151 (299)
Q Consensus 139 -~~~~fDvIi~D~~ 151 (299)
.-++.|++|.+..
T Consensus 97 ~~~g~id~lv~nAg 110 (279)
T 3sju_A 97 ERFGPIGILVNSAG 110 (279)
T ss_dssp HHHCSCCEEEECCC
T ss_pred HHcCCCcEEEECCC
Confidence 1257899998764
No 449
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=88.73 E-value=4.4 Score=34.55 Aligned_cols=76 Identities=14% Similarity=0.207 Sum_probs=49.7
Q ss_pred CCCeEEEEeccccHHHHHHHh----cCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHH------HHHh
Q 037807 68 NPKKVLLIGGGDGGILREISR----HASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSE------YLKT 137 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~----~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~------~l~~ 137 (299)
+.+.||+.|++ |++++++++ . + .+|++++.+++-++...+.+... ..++.++..|..+ +++.
T Consensus 6 ~~k~vlVTGas-~GIG~aia~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~ 77 (252)
T 3h7a_A 6 RNATVAVIGAG-DYIGAEIAKKFAAE-G-FTVFAGRRNGEKLAPLVAEIEAA-----GGRIVARSLDARNEDEVTAFLNA 77 (252)
T ss_dssp CSCEEEEECCS-SHHHHHHHHHHHHT-T-CEEEEEESSGGGGHHHHHHHHHT-----TCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHHHHhc-----CCeEEEEECcCCCHHHHHHHHHH
Confidence 45778888876 455555543 4 3 57999999988777666655432 3578889888743 2221
Q ss_pred c-CCCCccEEEEcCC
Q 037807 138 V-QSGTFDAIIIDAF 151 (299)
Q Consensus 138 ~-~~~~fDvIi~D~~ 151 (299)
. ..++.|++|.+..
T Consensus 78 ~~~~g~id~lv~nAg 92 (252)
T 3h7a_A 78 ADAHAPLEVTIFNVG 92 (252)
T ss_dssp HHHHSCEEEEEECCC
T ss_pred HHhhCCceEEEECCC
Confidence 1 0157899998764
No 450
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=88.57 E-value=0.82 Score=40.75 Aligned_cols=91 Identities=15% Similarity=0.108 Sum_probs=56.4
Q ss_pred CCCCeEEEEe--ccccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHH-HHHhcCCCCc
Q 037807 67 PNPKKVLLIG--GGDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSE-YLKTVQSGTF 143 (299)
Q Consensus 67 ~~~~~VL~IG--~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~-~l~~~~~~~f 143 (299)
....+||++| +|-|.++..+++..+. +|+++.- ++-.+.+++.-. + .++..+-.+ +.+. -+.+
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~~-~~~~~~~~~lGa-------~---~~i~~~~~~~~~~~--~~g~ 216 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTAS-KRNHAFLKALGA-------E---QCINYHEEDFLLAI--STPV 216 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEEC-HHHHHHHHHHTC-------S---EEEETTTSCHHHHC--CSCE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEec-cchHHHHHHcCC-------C---EEEeCCCcchhhhh--ccCC
Confidence 4568999997 4557777788887665 7888874 444777776311 1 122222122 3332 2579
Q ss_pred cEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 144 DAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 144 DvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
|+|+-... .+....+.+.|+++|.++.-
T Consensus 217 D~v~d~~g-----------~~~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 217 DAVIDLVG-----------GDVGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp EEEEESSC-----------HHHHHHHGGGEEEEEEEEEC
T ss_pred CEEEECCC-----------cHHHHHHHHhccCCCEEEEe
Confidence 99884322 22348889999999999874
No 451
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=88.56 E-value=1.7 Score=33.66 Aligned_cols=67 Identities=19% Similarity=0.290 Sum_probs=41.3
Q ss_pred CCeEEEEeccccHHHHHHHh---cCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEE-EEccHHHHHHhcCCCCcc
Q 037807 69 PKKVLLIGGGDGGILREISR---HASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVIL-HVCDGSEYLKTVQSGTFD 144 (299)
Q Consensus 69 ~~~VL~IG~G~G~~~~~l~~---~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v-~~~D~~~~l~~~~~~~fD 144 (299)
.++|++||+| .+++.+++ ..+.. |++++.+++-.+...+.+. ..+ ...|..+.+. ..|
T Consensus 21 ~~~v~iiG~G--~iG~~~a~~l~~~g~~-v~v~~r~~~~~~~~a~~~~----------~~~~~~~~~~~~~~-----~~D 82 (144)
T 3oj0_A 21 GNKILLVGNG--MLASEIAPYFSYPQYK-VTVAGRNIDHVRAFAEKYE----------YEYVLINDIDSLIK-----NND 82 (144)
T ss_dssp CCEEEEECCS--HHHHHHGGGCCTTTCE-EEEEESCHHHHHHHHHHHT----------CEEEECSCHHHHHH-----TCS
T ss_pred CCEEEEECCC--HHHHHHHHHHHhCCCE-EEEEcCCHHHHHHHHHHhC----------CceEeecCHHHHhc-----CCC
Confidence 7799999974 56666554 23444 9999999887654333221 122 2344444443 479
Q ss_pred EEEEcCCCC
Q 037807 145 AIIIDAFDP 153 (299)
Q Consensus 145 vIi~D~~~~ 153 (299)
+|+.-.+.+
T Consensus 83 ivi~at~~~ 91 (144)
T 3oj0_A 83 VIITATSSK 91 (144)
T ss_dssp EEEECSCCS
T ss_pred EEEEeCCCC
Confidence 999866544
No 452
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=88.42 E-value=0.59 Score=46.01 Aligned_cols=34 Identities=29% Similarity=0.388 Sum_probs=24.5
Q ss_pred CCeEEEEeccc-cHHHHHHHhcCCccEEEEEECCH
Q 037807 69 PKKVLLIGGGD-GGILREISRHASVEQIHICEIDT 102 (299)
Q Consensus 69 ~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~ 102 (299)
..+||+||+|+ |......+...++.+++.||-|.
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~ 360 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 360 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 57999999985 33333333345799999999986
No 453
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=88.40 E-value=3.4 Score=35.32 Aligned_cols=77 Identities=16% Similarity=0.239 Sum_probs=48.7
Q ss_pred CCeEEEEeccccHHHHHHHhcC--CccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHH------HHHhc--
Q 037807 69 PKKVLLIGGGDGGILREISRHA--SVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSE------YLKTV-- 138 (299)
Q Consensus 69 ~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~------~l~~~-- 138 (299)
.+.||+.|++ |++++++++.. ...+|++++.+++-++.+.+.+... ..++.++..|..+ .+++.
T Consensus 6 ~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~ 79 (257)
T 3imf_A 6 EKVVIITGGS-SGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF-----PGQILTVQMDVRNTDDIQKMIEQIDE 79 (257)
T ss_dssp TCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS-----TTCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 5678888865 55655554321 1257999999998877766655432 3578888888743 22211
Q ss_pred CCCCccEEEEcCC
Q 037807 139 QSGTFDAIIIDAF 151 (299)
Q Consensus 139 ~~~~fDvIi~D~~ 151 (299)
.-++.|++|.+..
T Consensus 80 ~~g~id~lv~nAg 92 (257)
T 3imf_A 80 KFGRIDILINNAA 92 (257)
T ss_dssp HHSCCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 0247899998764
No 454
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=88.38 E-value=1 Score=40.54 Aligned_cols=75 Identities=12% Similarity=0.135 Sum_probs=45.7
Q ss_pred CCCCCCeEEEEeccccH--HHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCC
Q 037807 65 SIPNPKKVLLIGGGDGG--ILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGT 142 (299)
Q Consensus 65 ~~~~~~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~ 142 (299)
..++.++|++||+|.=+ .++.+.+..+..+|.+.+.+ ..-+.+++.-... .-++... |..+.++ .
T Consensus 117 a~~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~-~a~~la~~l~~~~-----g~~~~~~--~~~eav~-----~ 183 (313)
T 3hdj_A 117 ARPRSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY-ASPEILERIGRRC-----GVPARMA--APADIAA-----Q 183 (313)
T ss_dssp SCTTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT-CCHHHHHHHHHHH-----TSCEEEC--CHHHHHH-----H
T ss_pred ccCCCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc-HHHHHHHHHHHhc-----CCeEEEe--CHHHHHh-----h
Confidence 34678899999988422 23334443457899999999 5555555432211 1123333 7766665 3
Q ss_pred ccEEEEcCCC
Q 037807 143 FDAIIIDAFD 152 (299)
Q Consensus 143 fDvIi~D~~~ 152 (299)
.|+|++-.+.
T Consensus 184 aDIVi~aT~s 193 (313)
T 3hdj_A 184 ADIVVTATRS 193 (313)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEEccCC
Confidence 6999986654
No 455
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=88.36 E-value=4.6 Score=35.48 Aligned_cols=78 Identities=14% Similarity=0.162 Sum_probs=50.4
Q ss_pred CCCeEEEEeccccHHHHHHHhcC--CccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHH------HHhc-
Q 037807 68 NPKKVLLIGGGDGGILREISRHA--SVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEY------LKTV- 138 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~------l~~~- 138 (299)
+.+.||+.|++ |++++++++.. ...+|++++.+++-++...+.+... ..++.++..|..+. +++.
T Consensus 30 ~gk~vlVTGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~ 103 (301)
T 3tjr_A 30 DGRAAVVTGGA-SGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ-----GFDAHGVVCDVRHLDEMVRLADEAF 103 (301)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-----CCceEEEEccCCCHHHHHHHHHHHH
Confidence 45788888866 55665554421 1257999999998887776655432 35788888887432 2211
Q ss_pred -CCCCccEEEEcCC
Q 037807 139 -QSGTFDAIIIDAF 151 (299)
Q Consensus 139 -~~~~fDvIi~D~~ 151 (299)
.-+..|++|.+..
T Consensus 104 ~~~g~id~lvnnAg 117 (301)
T 3tjr_A 104 RLLGGVDVVFSNAG 117 (301)
T ss_dssp HHHSSCSEEEECCC
T ss_pred HhCCCCCEEEECCC
Confidence 0247899998764
No 456
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=88.17 E-value=9.2 Score=31.74 Aligned_cols=78 Identities=17% Similarity=0.167 Sum_probs=48.5
Q ss_pred CCeEEEEeccccHHHHHHHhcC--CccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHH--HHhcC-----
Q 037807 69 PKKVLLIGGGDGGILREISRHA--SVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEY--LKTVQ----- 139 (299)
Q Consensus 69 ~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~--l~~~~----- 139 (299)
.++||+.|++ |+++++++++. ...+|++++.+++-.+...+.+... ...++.++..|..+. +++.-
T Consensus 2 ~k~vlITGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~~~~~ 76 (235)
T 3l77_A 2 MKVAVITGAS-RGIGEAIARALARDGYALALGARSVDRLEKIAHELMQE----QGVEVFYHHLDVSKAESVEEFSKKVLE 76 (235)
T ss_dssp CCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH----HCCCEEEEECCTTCHHHHHHHCC-HHH
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh----cCCeEEEEEeccCCHHHHHHHHHHHHH
Confidence 3578888865 55666555421 1257999999988777665554322 135788888887542 22110
Q ss_pred -CCCccEEEEcCC
Q 037807 140 -SGTFDAIIIDAF 151 (299)
Q Consensus 140 -~~~fDvIi~D~~ 151 (299)
-++.|++|....
T Consensus 77 ~~g~id~li~~Ag 89 (235)
T 3l77_A 77 RFGDVDVVVANAG 89 (235)
T ss_dssp HHSSCSEEEECCC
T ss_pred hcCCCCEEEECCc
Confidence 147899998754
No 457
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=88.12 E-value=5 Score=30.20 Aligned_cols=69 Identities=23% Similarity=0.263 Sum_probs=47.9
Q ss_pred cEEEEEECCHHHHHHHHhhchhhhcCCCCCCE-EEEEccHHHHHHhcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHH
Q 037807 93 EQIHICEIDTMLINVYKEYFPEIAIGYEDSRV-ILHVCDGSEYLKTVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAK 171 (299)
Q Consensus 93 ~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv-~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~ 171 (299)
.+|..||-|+...+..++.+... .... -....++.+.+.......+|+|++|..-+... ..++++.+++
T Consensus 6 ~~ILivdd~~~~~~~l~~~L~~~-----~~~~~v~~~~~~~~a~~~l~~~~~dlii~D~~l~~~~-----g~~~~~~lr~ 75 (144)
T 3kht_A 6 KRVLVVEDNPDDIALIRRVLDRK-----DIHCQLEFVDNGAKALYQVQQAKYDLIILDIGLPIAN-----GFEVMSAVRK 75 (144)
T ss_dssp EEEEEECCCHHHHHHHHHHHHHT-----TCCEEEEEESSHHHHHHHHTTCCCSEEEECTTCGGGC-----HHHHHHHHHS
T ss_pred CEEEEEeCCHHHHHHHHHHHHhc-----CCCeeEEEECCHHHHHHHhhcCCCCEEEEeCCCCCCC-----HHHHHHHHHh
Confidence 57899999999999888887654 1232 34556777766655467899999997654321 2567777766
No 458
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=88.11 E-value=5.6 Score=35.28 Aligned_cols=108 Identities=14% Similarity=0.032 Sum_probs=63.2
Q ss_pred CCCeEEEEeccccH--HHHHHHhcCCccEEEEEECC--HHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCc
Q 037807 68 NPKKVLLIGGGDGG--ILREISRHASVEQIHICEID--TMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTF 143 (299)
Q Consensus 68 ~~~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid--~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~f 143 (299)
...+|.+||+|.=+ +++.+++.. ..+|+++|.+ ++..+.+++. .++ ...+..+.++ ..
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G-~~~V~~~dr~~~~~~~~~~~~~-----------g~~-~~~~~~e~~~-----~a 84 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAG-AIDMAAYDAASAESWRPRAEEL-----------GVS-CKASVAEVAG-----EC 84 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHS-CCEEEEECSSCHHHHHHHHHHT-----------TCE-ECSCHHHHHH-----HC
T ss_pred CCCEEEEECccHHHHHHHHHHHHCC-CCeEEEEcCCCCHHHHHHHHHC-----------CCE-EeCCHHHHHh-----cC
Confidence 34689999998532 344455553 3479999997 5666655542 122 1234444444 35
Q ss_pred cEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHhhh
Q 037807 144 DAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAESLWFQQFSVQHLIDDCHRI 203 (299)
Q Consensus 144 DvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s~~~~~~~~~~~~~~l~~~ 203 (299)
|+||+-.+.+. ..+.++.+...|+++.+++-.+.. .+.....+.+.+.+.
T Consensus 85 DvVi~~vp~~~-------~~~~~~~l~~~l~~~~ivvd~st~---~~~~~~~~~~~~~~~ 134 (312)
T 3qsg_A 85 DVIFSLVTAQA-------ALEVAQQAGPHLCEGALYADFTSC---SPAVKRAIGDVISRH 134 (312)
T ss_dssp SEEEECSCTTT-------HHHHHHHHGGGCCTTCEEEECCCC---CHHHHHHHHHHHHHH
T ss_pred CEEEEecCchh-------HHHHHHhhHhhcCCCCEEEEcCCC---CHHHHHHHHHHHHhh
Confidence 99998776652 245678888889887776643322 233344455555444
No 459
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=87.96 E-value=5.4 Score=34.14 Aligned_cols=79 Identities=20% Similarity=0.218 Sum_probs=49.6
Q ss_pred CCCeEEEEeccccHHHHHHHhcC--CccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHH------HHhc-
Q 037807 68 NPKKVLLIGGGDGGILREISRHA--SVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEY------LKTV- 138 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~------l~~~- 138 (299)
..++||+.|++ |++++++++.. ...+|++++.+++-++.+.+.+... ...++.++..|..+. +++.
T Consensus 9 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (262)
T 3pk0_A 9 QGRSVVVTGGT-KGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQL----GSGKVIGVQTDVSDRAQCDALAGRAV 83 (262)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT----SSSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh----CCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 45678888765 55666554421 1257999999998877666655432 235788899887432 2111
Q ss_pred -CCCCccEEEEcCC
Q 037807 139 -QSGTFDAIIIDAF 151 (299)
Q Consensus 139 -~~~~fDvIi~D~~ 151 (299)
.-++.|++|....
T Consensus 84 ~~~g~id~lvnnAg 97 (262)
T 3pk0_A 84 EEFGGIDVVCANAG 97 (262)
T ss_dssp HHHSCCSEEEECCC
T ss_pred HHhCCCCEEEECCC
Confidence 0247899998754
No 460
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=87.93 E-value=1.1 Score=38.96 Aligned_cols=79 Identities=18% Similarity=0.223 Sum_probs=49.3
Q ss_pred CCCeEEEEeccccHHHHHHHhcC--CccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHH---HHh----c
Q 037807 68 NPKKVLLIGGGDGGILREISRHA--SVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEY---LKT----V 138 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~---l~~----~ 138 (299)
..+.||+.|++ |++++++++.. ...+|++++.++.-.+.+.+.+... ...++.++..|..+. ++. .
T Consensus 11 ~~k~vlITGas-~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dl~~~~~~v~~~~~~~ 85 (311)
T 3o26_A 11 KRRCAVVTGGN-KGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNS----NHENVVFHQLDVTDPIATMSSLADFI 85 (311)
T ss_dssp -CCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT----TCCSEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCcEEEEecCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----CCCceEEEEccCCCcHHHHHHHHHHH
Confidence 45678888865 55665554421 1258999999988776665555432 235789998887542 111 1
Q ss_pred --CCCCccEEEEcCC
Q 037807 139 --QSGTFDAIIIDAF 151 (299)
Q Consensus 139 --~~~~fDvIi~D~~ 151 (299)
..++.|++|.+..
T Consensus 86 ~~~~g~iD~lv~nAg 100 (311)
T 3o26_A 86 KTHFGKLDILVNNAG 100 (311)
T ss_dssp HHHHSSCCEEEECCC
T ss_pred HHhCCCCCEEEECCc
Confidence 0257999998764
No 461
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=87.92 E-value=7.9 Score=36.05 Aligned_cols=105 Identities=16% Similarity=0.199 Sum_probs=59.6
Q ss_pred eEEEEeccccH--HHHHHHhcCCccEEEEEECCHHHHHHHHhhc-hhhhcCCC--------CCCEEEEEccHHHHHHhcC
Q 037807 71 KVLLIGGGDGG--ILREISRHASVEQIHICEIDTMLINVYKEYF-PEIAIGYE--------DSRVILHVCDGSEYLKTVQ 139 (299)
Q Consensus 71 ~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~-~~~~~~~~--------~~rv~v~~~D~~~~l~~~~ 139 (299)
+|.+||+|.=+ ++..+++.. .+|+++|+|++.++..++.- +.....++ ..+++. ..|..+.+.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G--~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~-t~~~~~~~~--- 75 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARG--HEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSG-TTDFKKAVL--- 75 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTT--CEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHHHHH---
T ss_pred EEEEECCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEE-eCCHHHHhc---
Confidence 68999988533 334444542 47999999999888776521 10000000 113432 345443333
Q ss_pred CCCccEEEEcCCCCCCCC--CCC-CcHHHHHHHHHhcCC---CcEEEEec
Q 037807 140 SGTFDAIIIDAFDPIRPG--HDL-FEGPFFELVAKALRP---GGAMCIQA 183 (299)
Q Consensus 140 ~~~fDvIi~D~~~~~~~~--~~l-~t~ef~~~~~~~Lkp---gGvlv~~~ 183 (299)
..|+|++-.+.|.... ..+ +..+.++.+.+.|++ +.+++..+
T Consensus 76 --~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~S 123 (436)
T 1mv8_A 76 --DSDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRS 123 (436)
T ss_dssp --TCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECS
T ss_pred --cCCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeC
Confidence 3699999876654211 111 135677788888998 66665433
No 462
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=87.78 E-value=5.5 Score=35.09 Aligned_cols=86 Identities=12% Similarity=0.081 Sum_probs=51.5
Q ss_pred CCCeEEEEeccccHHHHHHH---hcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEE-ccHHHHHHhcCCCCc
Q 037807 68 NPKKVLLIGGGDGGILREIS---RHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHV-CDGSEYLKTVQSGTF 143 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~---~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~-~D~~~~l~~~~~~~f 143 (299)
..++|++||+| .+++.++ +..+ .+|+++|.+++-.+.+++. .++.+. .+..+. -...
T Consensus 156 ~g~~v~IiG~G--~iG~~~a~~l~~~G-~~V~~~d~~~~~~~~~~~~-----------g~~~~~~~~l~~~-----l~~a 216 (300)
T 2rir_A 156 HGSQVAVLGLG--RTGMTIARTFAALG-ANVKVGARSSAHLARITEM-----------GLVPFHTDELKEH-----VKDI 216 (300)
T ss_dssp TTSEEEEECCS--HHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHT-----------TCEEEEGGGHHHH-----STTC
T ss_pred CCCEEEEEccc--HHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHC-----------CCeEEchhhHHHH-----hhCC
Confidence 46899999986 4555443 3344 4899999998765544331 122221 232222 2468
Q ss_pred cEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 144 DAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 144 DvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
|+|+...+. .+...+ ..+.++++++++--
T Consensus 217 DvVi~~~p~------~~i~~~----~~~~mk~g~~lin~ 245 (300)
T 2rir_A 217 DICINTIPS------MILNQT----VLSSMTPKTLILDL 245 (300)
T ss_dssp SEEEECCSS------CCBCHH----HHTTSCTTCEEEEC
T ss_pred CEEEECCCh------hhhCHH----HHHhCCCCCEEEEE
Confidence 999987664 234444 34678988877643
No 463
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=87.63 E-value=4.4 Score=34.62 Aligned_cols=79 Identities=18% Similarity=0.197 Sum_probs=50.3
Q ss_pred CCCeEEEEeccccHHHHHHHhcC--CccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHH------HHhc-
Q 037807 68 NPKKVLLIGGGDGGILREISRHA--SVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEY------LKTV- 138 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~------l~~~- 138 (299)
..+.||+.|++ |++++++++.. ...+|++++.+++-.+...+.+... ..++.++..|..+. +...
T Consensus 28 ~~k~vlITGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~ 101 (262)
T 3rkr_A 28 SGQVAVVTGAS-RGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA-----GGEAESHACDLSHSDAIAAFATGVL 101 (262)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh-----CCceeEEEecCCCHHHHHHHHHHHH
Confidence 35678888865 56666655421 1257999999998877666655432 35788888887431 2111
Q ss_pred -CCCCccEEEEcCCC
Q 037807 139 -QSGTFDAIIIDAFD 152 (299)
Q Consensus 139 -~~~~fDvIi~D~~~ 152 (299)
.-++.|++|.....
T Consensus 102 ~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 102 AAHGRCDVLVNNAGV 116 (262)
T ss_dssp HHHSCCSEEEECCCC
T ss_pred HhcCCCCEEEECCCc
Confidence 12578999987643
No 464
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=87.59 E-value=4.8 Score=30.79 Aligned_cols=77 Identities=12% Similarity=0.219 Sum_probs=50.3
Q ss_pred cEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHh
Q 037807 93 EQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKA 172 (299)
Q Consensus 93 ~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~ 172 (299)
.+|..||-|+...+..++.+... .-.+. ...++.+.+.......+|+||+|..-+... ..++++.+++.
T Consensus 15 ~~ILivdd~~~~~~~l~~~L~~~-----g~~v~-~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~-----g~~~~~~l~~~ 83 (153)
T 3hv2_A 15 PEILLVDSQEVILQRLQQLLSPL-----PYTLH-FARDATQALQLLASREVDLVISAAHLPQMD-----GPTLLARIHQQ 83 (153)
T ss_dssp CEEEEECSCHHHHHHHHHHHTTS-----SCEEE-EESSHHHHHHHHHHSCCSEEEEESCCSSSC-----HHHHHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHhccc-----CcEEE-EECCHHHHHHHHHcCCCCEEEEeCCCCcCc-----HHHHHHHHHhH
Confidence 57899999999998888887643 11232 455666655443346799999998655321 26788888774
Q ss_pred cCCCcEEEE
Q 037807 173 LRPGGAMCI 181 (299)
Q Consensus 173 LkpgGvlv~ 181 (299)
. ++-.+++
T Consensus 84 ~-~~~~ii~ 91 (153)
T 3hv2_A 84 Y-PSTTRIL 91 (153)
T ss_dssp C-TTSEEEE
T ss_pred C-CCCeEEE
Confidence 3 4444443
No 465
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=87.59 E-value=6.5 Score=34.50 Aligned_cols=87 Identities=9% Similarity=0.035 Sum_probs=51.3
Q ss_pred CCCeEEEEeccccHHHHHHH---hcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEE-ccHHHHHHhcCCCCc
Q 037807 68 NPKKVLLIGGGDGGILREIS---RHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHV-CDGSEYLKTVQSGTF 143 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~---~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~-~D~~~~l~~~~~~~f 143 (299)
..++|++||+| .+++.++ +..+. +|+++|.+++-.+.+++. .++.+. .+..+. -...
T Consensus 154 ~g~~v~IiG~G--~iG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~-----------g~~~~~~~~l~~~-----l~~a 214 (293)
T 3d4o_A 154 HGANVAVLGLG--RVGMSVARKFAALGA-KVKVGARESDLLARIAEM-----------GMEPFHISKAAQE-----LRDV 214 (293)
T ss_dssp TTCEEEEECCS--HHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT-----------TSEEEEGGGHHHH-----TTTC
T ss_pred CCCEEEEEeeC--HHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHC-----------CCeecChhhHHHH-----hcCC
Confidence 46899999976 4544443 33444 899999998765544321 122221 232222 2468
Q ss_pred cEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 144 DAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 144 DvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
|+|+...+. .+...+. .+.++++++++--+
T Consensus 215 DvVi~~~p~------~~i~~~~----l~~mk~~~~lin~a 244 (293)
T 3d4o_A 215 DVCINTIPA------LVVTANV----LAEMPSHTFVIDLA 244 (293)
T ss_dssp SEEEECCSS------CCBCHHH----HHHSCTTCEEEECS
T ss_pred CEEEECCCh------HHhCHHH----HHhcCCCCEEEEec
Confidence 999987653 2444443 34688988776433
No 466
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=87.52 E-value=0.59 Score=42.18 Aligned_cols=47 Identities=11% Similarity=0.023 Sum_probs=39.3
Q ss_pred CCCCeEEEEeccccHHHHHHHhcCCccEEEEEECCH---HHHHHHHhhchhh
Q 037807 67 PNPKKVLLIGGGDGGILREISRHASVEQIHICEIDT---MLINVYKEYFPEI 115 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~---~vi~~a~~~~~~~ 115 (299)
.+...|||--||+|.++.++.+.. .+.+++|+++ ..++.+++.+...
T Consensus 241 ~~~~~vlDpF~GsGtt~~aa~~~~--r~~ig~e~~~~~~~~~~~~~~Rl~~~ 290 (319)
T 1eg2_A 241 HPGSTVLDFFAGSGVTARVAIQEG--RNSICTDAAPVFKEYYQKQLTFLQDD 290 (319)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHT--CEEEEEESSTHHHHHHHHHHHHC---
T ss_pred CCCCEEEecCCCCCHHHHHHHHcC--CcEEEEECCccHHHHHHHHHHHHHHc
Confidence 456789999999999999998874 5799999999 9999999988653
No 467
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=87.50 E-value=0.57 Score=42.35 Aligned_cols=94 Identities=12% Similarity=0.086 Sum_probs=55.9
Q ss_pred CeEEEEec--cccHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhc-CCCCccEE
Q 037807 70 KKVLLIGG--GDGGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTV-QSGTFDAI 146 (299)
Q Consensus 70 ~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~~fDvI 146 (299)
++||+.|+ |-|..+..+++..+. +|++++.+++-.+.+++.-. +.-+.....|..+.+.+. ....+|+|
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~~Ga-------~~~~~~~~~~~~~~v~~~~~~~g~D~v 237 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGF-RPIVTVRRDEQIALLKDIGA-------AHVLNEKAPDFEATLREVMKAEQPRIF 237 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHTC-------SEEEETTSTTHHHHHHHHHHHHCCCEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCC-------CEEEECCcHHHHHHHHHHhcCCCCcEE
Confidence 45665532 234445556666554 89999999998888876311 101111113444444432 12469998
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
+-... .+.++.+.+.|+++|.++.-
T Consensus 238 id~~g-----------~~~~~~~~~~l~~~G~iv~~ 262 (349)
T 3pi7_A 238 LDAVT-----------GPLASAIFNAMPKRARWIIY 262 (349)
T ss_dssp EESSC-----------HHHHHHHHHHSCTTCEEEEC
T ss_pred EECCC-----------ChhHHHHHhhhcCCCEEEEE
Confidence 84322 23357788999999999874
No 468
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=87.41 E-value=4.4 Score=33.36 Aligned_cols=67 Identities=18% Similarity=0.132 Sum_probs=44.8
Q ss_pred eEEEEeccccHHHHHHHhc--CCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHH---HHHhcCCCCccE
Q 037807 71 KVLLIGGGDGGILREISRH--ASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSE---YLKTVQSGTFDA 145 (299)
Q Consensus 71 ~VL~IG~G~G~~~~~l~~~--~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~---~l~~~~~~~fDv 145 (299)
+||+.| |+|.+++++++. ....+|++++.++.- .. ..++++++.+|..+ .+.+. -+..|+
T Consensus 2 ~ilItG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~-------~~------~~~~~~~~~~D~~d~~~~~~~~-~~~~d~ 66 (219)
T 3dqp_A 2 KIFIVG-STGRVGKSLLKSLSTTDYQIYAGARKVEQ-------VP------QYNNVKAVHFDVDWTPEEMAKQ-LHGMDA 66 (219)
T ss_dssp EEEEES-TTSHHHHHHHHHHTTSSCEEEEEESSGGG-------SC------CCTTEEEEECCTTSCHHHHHTT-TTTCSE
T ss_pred eEEEEC-CCCHHHHHHHHHHHHCCCEEEEEECCccc-------hh------hcCCceEEEecccCCHHHHHHH-HcCCCE
Confidence 689888 457787777652 123589999987642 11 12689999999866 34433 357999
Q ss_pred EEEcCCC
Q 037807 146 IIIDAFD 152 (299)
Q Consensus 146 Ii~D~~~ 152 (299)
||.....
T Consensus 67 vi~~ag~ 73 (219)
T 3dqp_A 67 IINVSGS 73 (219)
T ss_dssp EEECCCC
T ss_pred EEECCcC
Confidence 9986543
No 469
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=87.31 E-value=0.54 Score=37.10 Aligned_cols=75 Identities=12% Similarity=0.108 Sum_probs=46.4
Q ss_pred CHHHHHHHHhhchhhhcCCCCCCEEEEEccHHH-HHHhcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEE
Q 037807 101 DTMLINVYKEYFPEIAIGYEDSRVILHVCDGSE-YLKTVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAM 179 (299)
Q Consensus 101 d~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~-~l~~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvl 179 (299)
+|+.++.++..+... .+..+..+.-|-.. -+-+.+..+||+|+.=.+... ...++....+..+...|+|||.|
T Consensus 21 ~pe~le~~k~~~~~~----~~~~~d~qmlDRLa~G~VsLp~stYD~V~~lt~~~~--~~~~l~r~li~~l~~aLkpgG~L 94 (136)
T 2km1_A 21 TPELVENTKAQAASK----KVKFVDQFLINKLNDGSITLENAKYETVHYLTPEAQ--TDIKFPKKLISVLADSLKPNGSL 94 (136)
T ss_dssp SHHHHHHHHHHHHHT----TEEEEEEEEHHHHHHTCCCCCSSSCCSEEEECCCSS--CSCCCCHHHHHHHHTTCCTTCCE
T ss_pred CHHHHHHHHHhhhcc----ccchhhHHHHHHHhcCcccCCcccccEEEEecCCcc--chhhcCHHHHHHHHHHhCCCCEE
Confidence 566777666544321 11234444444321 111235789999998433221 33567799999999999999999
Q ss_pred EE
Q 037807 180 CI 181 (299)
Q Consensus 180 v~ 181 (299)
..
T Consensus 95 ~g 96 (136)
T 2km1_A 95 IG 96 (136)
T ss_dssp EC
T ss_pred Ee
Confidence 85
No 470
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=87.29 E-value=1.1 Score=40.96 Aligned_cols=95 Identities=13% Similarity=0.083 Sum_probs=58.5
Q ss_pred CCCCeEEEEeccc--cHHHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCcc
Q 037807 67 PNPKKVLLIGGGD--GGILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFD 144 (299)
Q Consensus 67 ~~~~~VL~IG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fD 144 (299)
+..++|.+||+|. +.+++.+.+. + .+|++.|.+++.++.+++. .+. ...|..+.+.+. ....|
T Consensus 6 ~~~~kIgIIG~G~mG~slA~~L~~~-G-~~V~~~dr~~~~~~~a~~~-----------G~~-~~~~~~e~~~~a-~~~aD 70 (341)
T 3ktd_A 6 DISRPVCILGLGLIGGSLLRDLHAA-N-HSVFGYNRSRSGAKSAVDE-----------GFD-VSADLEATLQRA-AAEDA 70 (341)
T ss_dssp CCSSCEEEECCSHHHHHHHHHHHHT-T-CCEEEECSCHHHHHHHHHT-----------TCC-EESCHHHHHHHH-HHTTC
T ss_pred CCCCEEEEEeecHHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHc-----------CCe-eeCCHHHHHHhc-ccCCC
Confidence 3456899999884 3344445444 3 5799999999988877652 111 235655555432 23469
Q ss_pred EEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEecCC
Q 037807 145 AIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQAES 185 (299)
Q Consensus 145 vIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~~s 185 (299)
+|++-.+.. ...+.++.+... ++| .+++..+|
T Consensus 71 lVilavP~~-------~~~~vl~~l~~~-~~~-~iv~Dv~S 102 (341)
T 3ktd_A 71 LIVLAVPMT-------AIDSLLDAVHTH-APN-NGFTDVVS 102 (341)
T ss_dssp EEEECSCHH-------HHHHHHHHHHHH-CTT-CCEEECCS
T ss_pred EEEEeCCHH-------HHHHHHHHHHcc-CCC-CEEEEcCC
Confidence 999876632 135677777664 665 45555544
No 471
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=87.28 E-value=5.1 Score=33.62 Aligned_cols=79 Identities=13% Similarity=0.166 Sum_probs=48.3
Q ss_pred CCCeEEEEeccccHHHHHHHhcC--CccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccH--------HHHHHh
Q 037807 68 NPKKVLLIGGGDGGILREISRHA--SVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDG--------SEYLKT 137 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~--------~~~l~~ 137 (299)
+.+.||+.|++ |+++++++++. ...+|.+++.+++-++...+.+... ..+++.++..|. .++++.
T Consensus 13 ~~k~vlITGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~d~d~~~~~~~~~~~~~ 87 (247)
T 3i1j_A 13 KGRVILVTGAA-RGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSA----GQPQPLIIALNLENATAQQYRELAAR 87 (247)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----TSCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhc----CCCCceEEEeccccCCHHHHHHHHHH
Confidence 35678888865 56666655421 1257999999998887766665443 235667777665 122221
Q ss_pred c--CCCCccEEEEcCC
Q 037807 138 V--QSGTFDAIIIDAF 151 (299)
Q Consensus 138 ~--~~~~fDvIi~D~~ 151 (299)
. .-++.|++|....
T Consensus 88 ~~~~~g~id~lv~nAg 103 (247)
T 3i1j_A 88 VEHEFGRLDGLLHNAS 103 (247)
T ss_dssp HHHHHSCCSEEEECCC
T ss_pred HHHhCCCCCEEEECCc
Confidence 1 0247899998764
No 472
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=87.20 E-value=12 Score=32.19 Aligned_cols=77 Identities=19% Similarity=0.185 Sum_probs=47.0
Q ss_pred CCeEEEEeccccHHHHHHHhc--CCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHH------HHhc--
Q 037807 69 PKKVLLIGGGDGGILREISRH--ASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEY------LKTV-- 138 (299)
Q Consensus 69 ~~~VL~IG~G~G~~~~~l~~~--~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~------l~~~-- 138 (299)
.++||+.|++ |++++++++. ....+|++++.+++-.+...+.+... ..++.++..|..+. +++.
T Consensus 44 ~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dl~d~~~v~~~~~~~~~ 117 (285)
T 2c07_A 44 NKVALVTGAG-RGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF-----GYESSGYAGDVSKKEEISEVINKILT 117 (285)
T ss_dssp SCEEEEESTT-SHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT-----TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc-----CCceeEEECCCCCHHHHHHHHHHHHH
Confidence 4678888755 6777776652 12357888888877666544444321 35788888886432 2111
Q ss_pred CCCCccEEEEcCC
Q 037807 139 QSGTFDAIIIDAF 151 (299)
Q Consensus 139 ~~~~fDvIi~D~~ 151 (299)
.-+..|+||....
T Consensus 118 ~~~~id~li~~Ag 130 (285)
T 2c07_A 118 EHKNVDILVNNAG 130 (285)
T ss_dssp HCSCCCEEEECCC
T ss_pred hcCCCCEEEECCC
Confidence 1257899998764
No 473
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=87.20 E-value=5.1 Score=33.79 Aligned_cols=78 Identities=17% Similarity=0.199 Sum_probs=49.8
Q ss_pred CCCeEEEEeccccHHHHHHHhcC--CccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHH------HHhc-
Q 037807 68 NPKKVLLIGGGDGGILREISRHA--SVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEY------LKTV- 138 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~------l~~~- 138 (299)
+.+.||+.|++ |+++++++++. ...+|++++.+++-.+...+.+... ..++.++..|..+. +++.
T Consensus 8 ~~k~vlITGas-~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (253)
T 3qiv_A 8 ENKVGIVTGSG-GGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD-----GGTAISVAVDVSDPESAKAMADRTL 81 (253)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-----CCcEEEEEccCCCHHHHHHHHHHHH
Confidence 45778888865 55655554421 1257999999998877666655432 45788888887532 2111
Q ss_pred -CCCCccEEEEcCC
Q 037807 139 -QSGTFDAIIIDAF 151 (299)
Q Consensus 139 -~~~~fDvIi~D~~ 151 (299)
.-+..|++|....
T Consensus 82 ~~~g~id~li~~Ag 95 (253)
T 3qiv_A 82 AEFGGIDYLVNNAA 95 (253)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 0247899998764
No 474
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=87.16 E-value=5.2 Score=35.77 Aligned_cols=70 Identities=19% Similarity=0.180 Sum_probs=42.5
Q ss_pred CCeEEEEeccccH--HHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 69 PKKVLLIGGGDGG--ILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 69 ~~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
..+|.+||+|.-+ .+..+.+.+...-+-++|.+++..+...+.+. +. ...|..+.+. +...|+|
T Consensus 4 ~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g----------~~-~~~~~~~~l~---~~~~D~V 69 (344)
T 3euw_A 4 TLRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANG----------AE-AVASPDEVFA---RDDIDGI 69 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTT----------CE-EESSHHHHTT---CSCCCEE
T ss_pred ceEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcC----------Cc-eeCCHHHHhc---CCCCCEE
Confidence 4589999998522 33344455554434478999987665443321 22 3467666664 3568999
Q ss_pred EEcCCC
Q 037807 147 IIDAFD 152 (299)
Q Consensus 147 i~D~~~ 152 (299)
++-.+.
T Consensus 70 ~i~tp~ 75 (344)
T 3euw_A 70 VIGSPT 75 (344)
T ss_dssp EECSCG
T ss_pred EEeCCc
Confidence 886544
No 475
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=87.04 E-value=3 Score=36.68 Aligned_cols=79 Identities=23% Similarity=0.244 Sum_probs=48.6
Q ss_pred CCCeEEEEeccccHHHHHHHhcC--CccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHH------HHhc-
Q 037807 68 NPKKVLLIGGGDGGILREISRHA--SVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEY------LKTV- 138 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~------l~~~- 138 (299)
+.++||+.|++ |++++++++.. ...+|++++.+++-.+...+.+... ...++.++..|..+. +++.
T Consensus 40 ~~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dv~d~~~v~~~~~~~~ 114 (293)
T 3rih_A 40 SARSVLVTGGT-KGIGRGIATVFARAGANVAVAARSPRELSSVTAELGEL----GAGNVIGVRLDVSDPGSCADAARTVV 114 (293)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTS----SSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhh----CCCcEEEEEEeCCCHHHHHHHHHHHH
Confidence 35678887765 55655554321 1257999999987766655554432 225788899887542 2111
Q ss_pred -CCCCccEEEEcCC
Q 037807 139 -QSGTFDAIIIDAF 151 (299)
Q Consensus 139 -~~~~fDvIi~D~~ 151 (299)
.-++.|++|.+..
T Consensus 115 ~~~g~iD~lvnnAg 128 (293)
T 3rih_A 115 DAFGALDVVCANAG 128 (293)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 1257899998754
No 476
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=87.02 E-value=9.1 Score=33.86 Aligned_cols=80 Identities=15% Similarity=0.136 Sum_probs=50.3
Q ss_pred CCCeEEEEeccccHHHHHHHhcC--CccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHH------HHHhc-
Q 037807 68 NPKKVLLIGGGDGGILREISRHA--SVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSE------YLKTV- 138 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~------~l~~~- 138 (299)
..+.||+.|++ |++++++++.. ...+|++++.+++-.+.+.+.+...+ ...++.++..|..+ .+...
T Consensus 7 ~~k~vlVTGas-~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~ 82 (319)
T 3ioy_A 7 AGRTAFVTGGA-NGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEG---SGPEVMGVQLDVASREGFKMAADEVE 82 (319)
T ss_dssp TTCEEEEETTT-STHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT---CGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEcCCc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 35688888866 55555554421 12579999999988776666554331 12478889888743 22211
Q ss_pred -CCCCccEEEEcCC
Q 037807 139 -QSGTFDAIIIDAF 151 (299)
Q Consensus 139 -~~~~fDvIi~D~~ 151 (299)
.-+..|++|.+..
T Consensus 83 ~~~g~id~lv~nAg 96 (319)
T 3ioy_A 83 ARFGPVSILCNNAG 96 (319)
T ss_dssp HHTCCEEEEEECCC
T ss_pred HhCCCCCEEEECCC
Confidence 1357899998764
No 477
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=86.99 E-value=1.8 Score=37.71 Aligned_cols=90 Identities=18% Similarity=0.095 Sum_probs=53.9
Q ss_pred CCeEEEEeccccH--HHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEE
Q 037807 69 PKKVLLIGGGDGG--ILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAI 146 (299)
Q Consensus 69 ~~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvI 146 (299)
..+|.+||+|.=+ ++..+.+.....+|+++|.+++.++.+++. .. .+ ....|..+.+ ...|+|
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~-g~-----~~----~~~~~~~~~~-----~~aDvV 70 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALER-GI-----VD----EATADFKVFA-----ALADVI 70 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHT-TS-----CS----EEESCTTTTG-----GGCSEE
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHc-CC-----cc----cccCCHHHhh-----cCCCEE
Confidence 3589999988532 344444442135799999999888766542 10 00 1223322222 347999
Q ss_pred EEcCCCCCCCCCCCCcHHHHHHHHHh-cCCCcEEE
Q 037807 147 IIDAFDPIRPGHDLFEGPFFELVAKA-LRPGGAMC 180 (299)
Q Consensus 147 i~D~~~~~~~~~~l~t~ef~~~~~~~-LkpgGvlv 180 (299)
++-.+... ..++++.+... |+++.+++
T Consensus 71 ilavp~~~-------~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 71 ILAVPIKK-------TIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp EECSCHHH-------HHHHHHHHHTSCCCTTCEEE
T ss_pred EEcCCHHH-------HHHHHHHHHhcCCCCCCEEE
Confidence 98765431 25677777777 88766655
No 478
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=86.96 E-value=10 Score=32.28 Aligned_cols=75 Identities=13% Similarity=0.190 Sum_probs=49.3
Q ss_pred CCCeEEEEeccccHHHHHH----HhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHH------HHh
Q 037807 68 NPKKVLLIGGGDGGILREI----SRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEY------LKT 137 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l----~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~------l~~ 137 (299)
+.+.||+.|++. ++++++ ++. + .+|++++.+++-++...+.+... ..++.++..|..+. +++
T Consensus 10 ~~k~vlVTGas~-gIG~aia~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~ 81 (264)
T 3ucx_A 10 TDKVVVISGVGP-ALGTTLARRCAEQ-G-ADLVLAARTVERLEDVAKQVTDT-----GRRALSVGTDITDDAQVAHLVDE 81 (264)
T ss_dssp TTCEEEEESCCT-THHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCcEEEEECCCc-HHHHHHHHHHHHC-c-CEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEEcCCCCHHHHHHHHHH
Confidence 457888888764 455544 444 2 57999999988777666655432 45788888887432 221
Q ss_pred c--CCCCccEEEEcC
Q 037807 138 V--QSGTFDAIIIDA 150 (299)
Q Consensus 138 ~--~~~~fDvIi~D~ 150 (299)
. .-++.|++|.+.
T Consensus 82 ~~~~~g~id~lv~nA 96 (264)
T 3ucx_A 82 TMKAYGRVDVVINNA 96 (264)
T ss_dssp HHHHTSCCSEEEECC
T ss_pred HHHHcCCCcEEEECC
Confidence 1 135789999876
No 479
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=86.94 E-value=6.2 Score=29.44 Aligned_cols=80 Identities=13% Similarity=0.184 Sum_probs=50.9
Q ss_pred ccEEEEEECCHHHHHHHHhhchhhhcCCCCC-CEEEEEccHHHHHHhcCC-----CCccEEEEcCCCCCCCCCCCCcHHH
Q 037807 92 VEQIHICEIDTMLINVYKEYFPEIAIGYEDS-RVILHVCDGSEYLKTVQS-----GTFDAIIIDAFDPIRPGHDLFEGPF 165 (299)
Q Consensus 92 ~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~-rv~v~~~D~~~~l~~~~~-----~~fDvIi~D~~~~~~~~~~l~t~ef 165 (299)
..+|..||-|+...+..++.+... .. ..-....++.+.+..... ..+|+||+|..-|... ..++
T Consensus 9 ~~~iLivdd~~~~~~~l~~~l~~~-----~~~~~v~~~~~~~~a~~~l~~~~~~~~~~dlvi~D~~l~~~~-----g~~~ 78 (146)
T 3ilh_A 9 IDSVLLIDDDDIVNFLNTTIIRMT-----HRVEEIQSVTSGNAAINKLNELYAAGRWPSIICIDINMPGIN-----GWEL 78 (146)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHTT-----CCEEEEEEESSHHHHHHHHHHHHTSSCCCSEEEEESSCSSSC-----HHHH
T ss_pred cceEEEEeCCHHHHHHHHHHHHhc-----CCCeeeeecCCHHHHHHHHHHhhccCCCCCEEEEcCCCCCCC-----HHHH
Confidence 357899999999888888877643 11 122345566665543323 6799999998765322 2678
Q ss_pred HHHHHHh---cCCCcEEEE
Q 037807 166 FELVAKA---LRPGGAMCI 181 (299)
Q Consensus 166 ~~~~~~~---LkpgGvlv~ 181 (299)
++.+++. ..++-.+++
T Consensus 79 ~~~l~~~~~~~~~~~~ii~ 97 (146)
T 3ilh_A 79 IDLFKQHFQPMKNKSIVCL 97 (146)
T ss_dssp HHHHHHHCGGGTTTCEEEE
T ss_pred HHHHHHhhhhccCCCeEEE
Confidence 8888873 344444443
No 480
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=86.94 E-value=6.8 Score=34.15 Aligned_cols=108 Identities=21% Similarity=0.237 Sum_probs=59.3
Q ss_pred CCeEEEEeccccHHHHHHHhcC--CccEEEEEECCHH-HHHHHHhhchhhhcCCCCCCEEEEEccHHHH------HHhc-
Q 037807 69 PKKVLLIGGGDGGILREISRHA--SVEQIHICEIDTM-LINVYKEYFPEIAIGYEDSRVILHVCDGSEY------LKTV- 138 (299)
Q Consensus 69 ~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~-vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~------l~~~- 138 (299)
.++||+.|++ |+++++++++. ...+|++++.++. ..+...+.... ...++.++..|..+. +++.
T Consensus 47 gk~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~d~~~v~~~~~~~~ 120 (291)
T 3ijr_A 47 GKNVLITGGD-SGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEK-----EGVKCVLLPGDLSDEQHCKDIVQETV 120 (291)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHT-----TTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh-----cCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 4678888865 55666554421 1257899998865 34444433332 135788888887432 2211
Q ss_pred -CCCCccEEEEcCCCCC--CCCCCCCc--------------HHHHHHHHHhcCCCcEEEEe
Q 037807 139 -QSGTFDAIIIDAFDPI--RPGHDLFE--------------GPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 139 -~~~~fDvIi~D~~~~~--~~~~~l~t--------------~ef~~~~~~~LkpgGvlv~~ 182 (299)
.-++.|++|.+..... .+-..+-. ....+.+...|+++|.++.-
T Consensus 121 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~i 181 (291)
T 3ijr_A 121 RQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINT 181 (291)
T ss_dssp HHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred HHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEE
Confidence 1247899998754221 11111111 12345556677888876653
No 481
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=86.91 E-value=4.5 Score=35.05 Aligned_cols=78 Identities=17% Similarity=0.300 Sum_probs=48.9
Q ss_pred CCCeEEEEeccccHHHHHHHhcC--CccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHH------HHHhc-
Q 037807 68 NPKKVLLIGGGDGGILREISRHA--SVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSE------YLKTV- 138 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~------~l~~~- 138 (299)
..++||+.|++ |++++++++.. ...+|++++.+++-++...+.+... ..++.++..|..+ ++++.
T Consensus 31 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~v~~~~~~~~ 104 (276)
T 3r1i_A 31 SGKRALITGAS-TGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV-----GGKALPIRCDVTQPDQVRGMLDQMT 104 (276)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT-----TCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 45788888866 55655554321 1257999999988776666555432 3578888888743 22211
Q ss_pred -CCCCccEEEEcCC
Q 037807 139 -QSGTFDAIIIDAF 151 (299)
Q Consensus 139 -~~~~fDvIi~D~~ 151 (299)
.-++.|++|....
T Consensus 105 ~~~g~iD~lvnnAg 118 (276)
T 3r1i_A 105 GELGGIDIAVCNAG 118 (276)
T ss_dssp HHHSCCSEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 0247899998764
No 482
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=86.90 E-value=14 Score=31.63 Aligned_cols=78 Identities=18% Similarity=0.169 Sum_probs=46.8
Q ss_pred CCCeEEEEeccccHHHHHHHhcC--CccEEEEEECC------------HHHHHHHHhhchhhhcCCCCCCEEEEEccHHH
Q 037807 68 NPKKVLLIGGGDGGILREISRHA--SVEQIHICEID------------TMLINVYKEYFPEIAIGYEDSRVILHVCDGSE 133 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid------------~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~ 133 (299)
+.+.||+.|++ |++++++++.. ...+|++++.+ .+-++.+.+.+... ..++.++..|..+
T Consensus 9 ~gk~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~ 82 (287)
T 3pxx_A 9 QDKVVLVTGGA-RGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT-----GRKAYTAEVDVRD 82 (287)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT-----TSCEEEEECCTTC
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc-----CCceEEEEccCCC
Confidence 45778888866 45655554321 12579999987 55555544444332 4578888888743
Q ss_pred ------HHHhc--CCCCccEEEEcCC
Q 037807 134 ------YLKTV--QSGTFDAIIIDAF 151 (299)
Q Consensus 134 ------~l~~~--~~~~fDvIi~D~~ 151 (299)
++++. .-++.|++|.+..
T Consensus 83 ~~~v~~~~~~~~~~~g~id~lv~nAg 108 (287)
T 3pxx_A 83 RAAVSRELANAVAEFGKLDVVVANAG 108 (287)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 22211 0247899998754
No 483
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=86.89 E-value=9 Score=32.71 Aligned_cols=80 Identities=15% Similarity=0.236 Sum_probs=49.2
Q ss_pred CCCeEEEEeccccHHHHHHHhcC--CccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHH------HHhc-
Q 037807 68 NPKKVLLIGGGDGGILREISRHA--SVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEY------LKTV- 138 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~------l~~~- 138 (299)
..+.||+.|++ |++++++++.. ...+|++++.+++-++...+.+... ....++.++..|..+. +++.
T Consensus 7 ~~k~~lVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 82 (265)
T 3lf2_A 7 SEAVAVVTGGS-SGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQR---FPGARLFASVCDVLDALQVRAFAEACE 82 (265)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH---STTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh---cCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 35678888866 55665554321 1257999999998777666655431 1234688888887432 2211
Q ss_pred -CCCCccEEEEcCC
Q 037807 139 -QSGTFDAIIIDAF 151 (299)
Q Consensus 139 -~~~~fDvIi~D~~ 151 (299)
.-++.|++|.+..
T Consensus 83 ~~~g~id~lvnnAg 96 (265)
T 3lf2_A 83 RTLGCASILVNNAG 96 (265)
T ss_dssp HHHCSCSEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 1257899998764
No 484
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=86.88 E-value=5.7 Score=37.06 Aligned_cols=78 Identities=17% Similarity=0.234 Sum_probs=46.9
Q ss_pred CCCeEEEEeccccH--HHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEc---cHHHHHHhcCCCC
Q 037807 68 NPKKVLLIGGGDGG--ILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVC---DGSEYLKTVQSGT 142 (299)
Q Consensus 68 ~~~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~---D~~~~l~~~~~~~ 142 (299)
++.+|.+||+|.-+ .+..+.+.++.+-+-++|.+++..+.+.+.+... .-+..++..+ |..+.+. +..
T Consensus 19 ~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~----g~~~~~~~~~~~~~~~~ll~---~~~ 91 (444)
T 2ixa_A 19 KKVRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKN----GKKPAKVFGNGNDDYKNMLK---DKN 91 (444)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHT----TCCCCEEECSSTTTHHHHTT---CTT
T ss_pred CCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhc----CCCCCceeccCCCCHHHHhc---CCC
Confidence 35689999998422 3344445555554567899999877665544322 1123344331 6666664 346
Q ss_pred ccEEEEcCCC
Q 037807 143 FDAIIIDAFD 152 (299)
Q Consensus 143 fDvIi~D~~~ 152 (299)
.|+|++-.+.
T Consensus 92 vD~V~i~tp~ 101 (444)
T 2ixa_A 92 IDAVFVSSPW 101 (444)
T ss_dssp CCEEEECCCG
T ss_pred CCEEEEcCCc
Confidence 8999986654
No 485
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=86.78 E-value=5 Score=32.01 Aligned_cols=77 Identities=9% Similarity=0.099 Sum_probs=53.3
Q ss_pred cEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHh
Q 037807 93 EQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKA 172 (299)
Q Consensus 93 ~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~ 172 (299)
.+|..||=|+.+.+..+..+... .-.+ ....|+.+.+.......+|+|++|..-|... ..++.+.+++.
T Consensus 8 ~~iLivdd~~~~~~~l~~~L~~~-----g~~v-~~~~~~~~al~~~~~~~~dlvl~D~~lp~~~-----g~~~~~~l~~~ 76 (184)
T 3rqi_A 8 KNFLVIDDNEVFAGTLARGLERR-----GYAV-RQAHNKDEALKLAGAEKFEFITVXLHLGNDS-----GLSLIAPLCDL 76 (184)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHT-----TCEE-EEECSHHHHHHHHTTSCCSEEEECSEETTEE-----SHHHHHHHHHH
T ss_pred CeEEEEcCCHHHHHHHHHHHHHC-----CCEE-EEeCCHHHHHHHHhhCCCCEEEEeccCCCcc-----HHHHHHHHHhc
Confidence 47999999999999998888653 1234 4567887777655457799999997655321 26788888775
Q ss_pred cCCCcEEEE
Q 037807 173 LRPGGAMCI 181 (299)
Q Consensus 173 LkpgGvlv~ 181 (299)
- ++-.+++
T Consensus 77 ~-~~~~ii~ 84 (184)
T 3rqi_A 77 Q-PDARILV 84 (184)
T ss_dssp C-TTCEEEE
T ss_pred C-CCCCEEE
Confidence 4 4444433
No 486
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=86.76 E-value=14 Score=33.17 Aligned_cols=107 Identities=18% Similarity=0.221 Sum_probs=55.5
Q ss_pred CCCCeEEEEeccccH--HHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCcc
Q 037807 67 PNPKKVLLIGGGDGG--ILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFD 144 (299)
Q Consensus 67 ~~~~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fD 144 (299)
.++.+|.+||+|.=+ ++..++...-..+++.+|++++.++--..-+.... .+. .++++..+|-.. -...|
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~-~~~-~~~~i~~~~~~a------~~~aD 78 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDAL-PFT-SPKKIYSAEYSD------AKDAD 78 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTG-GGS-CCCEEEECCGGG------GTTCS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhh-hhc-CCcEEEECcHHH------hcCCC
Confidence 457899999976422 22223344434689999999886663322222111 111 356666665322 24579
Q ss_pred EEEEcCCCCCCC---CCCCC--c----HHHHHHHHHhcCCCcEEEEe
Q 037807 145 AIIIDAFDPIRP---GHDLF--E----GPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 145 vIi~D~~~~~~~---~~~l~--t----~ef~~~~~~~LkpgGvlv~~ 182 (299)
+||+-...|..+ ...|+ + .++-+.+.+ ..|++++++-
T Consensus 79 iVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~-~~p~a~ilvv 124 (326)
T 3vku_A 79 LVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVD-SGFNGIFLVA 124 (326)
T ss_dssp EEEECCCCC----------------CHHHHHHHHHT-TTCCSEEEEC
T ss_pred EEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHh-cCCceEEEEc
Confidence 999865544433 22333 2 233333443 4789987763
No 487
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=86.72 E-value=2 Score=36.70 Aligned_cols=90 Identities=17% Similarity=0.270 Sum_probs=53.6
Q ss_pred CeEEEEeccccH--HHHHHHhcC--CccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccE
Q 037807 70 KKVLLIGGGDGG--ILREISRHA--SVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDA 145 (299)
Q Consensus 70 ~~VL~IG~G~G~--~~~~l~~~~--~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDv 145 (299)
.+|.+||+|.=+ +++.+++.. +..+|+++|.+++.++..++.+. ++ ...|..+.++ ..|+
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g----------~~-~~~~~~e~~~-----~aDv 66 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYG----------LT-TTTDNNEVAK-----NADI 66 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHC----------CE-ECSCHHHHHH-----HCSE
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhC----------CE-EeCChHHHHH-----hCCE
Confidence 479999988532 344455432 23479999999988776654321 12 2234445443 3699
Q ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEe
Q 037807 146 IIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQ 182 (299)
Q Consensus 146 Ii~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~ 182 (299)
|++-.+.. ...+.++.+...|+++.+++..
T Consensus 67 Vilav~~~-------~~~~v~~~l~~~l~~~~~vvs~ 96 (247)
T 3gt0_A 67 LILSIKPD-------LYASIINEIKEIIKNDAIIVTI 96 (247)
T ss_dssp EEECSCTT-------THHHHC---CCSSCTTCEEEEC
T ss_pred EEEEeCHH-------HHHHHHHHHHhhcCCCCEEEEe
Confidence 99876322 1256677777778887777643
No 488
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=86.71 E-value=2.6 Score=38.27 Aligned_cols=70 Identities=17% Similarity=0.231 Sum_probs=44.3
Q ss_pred CCeEEEEeccc-cH--HHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccE
Q 037807 69 PKKVLLIGGGD-GG--ILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDA 145 (299)
Q Consensus 69 ~~~VL~IG~G~-G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDv 145 (299)
+.+|.+||+|. |. .+..+.+.++.+-+-++|.|++..+.+.+.++ ..+ ...|..+.+.+ ...|+
T Consensus 5 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~-------~~~---~~~~~~~ll~~---~~vD~ 71 (359)
T 3m2t_A 5 LIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFIS-------DIP---VLDNVPAMLNQ---VPLDA 71 (359)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSC-------SCC---EESSHHHHHHH---SCCSE
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcC-------CCc---ccCCHHHHhcC---CCCCE
Confidence 46899999997 54 34555566654434477999987654433321 112 24677777763 45799
Q ss_pred EEEcCC
Q 037807 146 IIIDAF 151 (299)
Q Consensus 146 Ii~D~~ 151 (299)
|++-.+
T Consensus 72 V~i~tp 77 (359)
T 3m2t_A 72 VVMAGP 77 (359)
T ss_dssp EEECSC
T ss_pred EEEcCC
Confidence 998554
No 489
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=86.68 E-value=4 Score=30.61 Aligned_cols=79 Identities=11% Similarity=0.080 Sum_probs=53.3
Q ss_pred cEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCC-CCccEEEEcCCCC-CCCCCCCCcHHHHHHHH
Q 037807 93 EQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQS-GTFDAIIIDAFDP-IRPGHDLFEGPFFELVA 170 (299)
Q Consensus 93 ~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~-~~fDvIi~D~~~~-~~~~~~l~t~ef~~~~~ 170 (299)
.+|..||=|+...+..++.+... . .-++. ...++.+.+..... ..+|+|++|..-+ ... ..++++.++
T Consensus 5 ~~ilivdd~~~~~~~l~~~L~~~-~---~~~v~-~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~-----g~~~~~~l~ 74 (140)
T 3lua_A 5 GTVLLIDYFEYEREKTKIIFDNI-G---EYDFI-EVENLKKFYSIFKDLDSITLIIMDIAFPVEKE-----GLEVLSAIR 74 (140)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHH-C---CCEEE-EECSHHHHHTTTTTCCCCSEEEECSCSSSHHH-----HHHHHHHHH
T ss_pred CeEEEEeCCHHHHHHHHHHHHhc-c---CccEE-EECCHHHHHHHHhcCCCCcEEEEeCCCCCCCc-----HHHHHHHHH
Confidence 47899999999999988887651 0 12344 66778777766545 7899999997655 211 266777777
Q ss_pred H--hcCCCcEEEE
Q 037807 171 K--ALRPGGAMCI 181 (299)
Q Consensus 171 ~--~LkpgGvlv~ 181 (299)
+ ....--++++
T Consensus 75 ~~~~~~~~~ii~l 87 (140)
T 3lua_A 75 NNSRTANTPVIIA 87 (140)
T ss_dssp HSGGGTTCCEEEE
T ss_pred hCcccCCCCEEEE
Confidence 7 4443345554
No 490
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=86.65 E-value=2.2 Score=32.37 Aligned_cols=94 Identities=17% Similarity=0.255 Sum_probs=50.8
Q ss_pred CCeEEEEeccccHHHHHHHh---cCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHH--HHHHhcCCCCc
Q 037807 69 PKKVLLIGGGDGGILREISR---HASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGS--EYLKTVQSGTF 143 (299)
Q Consensus 69 ~~~VL~IG~G~G~~~~~l~~---~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~--~~l~~~~~~~f 143 (299)
.++|+++|+| .+++.+++ ..+ .+|+++|.+++.++.+++ ....++.+|.. +.+.+..-+.+
T Consensus 6 ~~~v~I~G~G--~iG~~~a~~l~~~g-~~v~~~d~~~~~~~~~~~-----------~~~~~~~~d~~~~~~l~~~~~~~~ 71 (144)
T 2hmt_A 6 NKQFAVIGLG--RFGGSIVKELHRMG-HEVLAVDINEEKVNAYAS-----------YATHAVIANATEENELLSLGIRNF 71 (144)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTT-CCCEEEESCHHHHHTTTT-----------TCSEEEECCTTCHHHHHTTTGGGC
T ss_pred CCcEEEECCC--HHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHH-----------hCCEEEEeCCCCHHHHHhcCCCCC
Confidence 3579999974 55554433 223 468999999876543322 12345666653 23332112468
Q ss_pred cEEEEcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 144 DAIIIDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 144 DvIi~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
|+|+.....+.. .........+.+.++ .++...
T Consensus 72 d~vi~~~~~~~~------~~~~~~~~~~~~~~~-~ii~~~ 104 (144)
T 2hmt_A 72 EYVIVAIGANIQ------ASTLTTLLLKELDIP-NIWVKA 104 (144)
T ss_dssp SEEEECCCSCHH------HHHHHHHHHHHTTCS-EEEEEC
T ss_pred CEEEECCCCchH------HHHHHHHHHHHcCCC-eEEEEe
Confidence 999986554200 112233445556775 555433
No 491
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=86.64 E-value=3.6 Score=38.06 Aligned_cols=106 Identities=14% Similarity=0.129 Sum_probs=59.0
Q ss_pred eEEEEeccccHH--HHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhc-C----C--CCCCEEEEEccHHHHHHhcCCC
Q 037807 71 KVLLIGGGDGGI--LREISRHASVEQIHICEIDTMLINVYKEYFPEIAI-G----Y--EDSRVILHVCDGSEYLKTVQSG 141 (299)
Q Consensus 71 ~VL~IG~G~G~~--~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~-~----~--~~~rv~v~~~D~~~~l~~~~~~ 141 (299)
+|.+||+|.=+. +..+++ + .+|+++|++++.++..++....... . + ...++++ ..|..+.+.
T Consensus 2 kI~VIG~G~vG~~~A~~La~--G-~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~-t~~~~~~~~----- 72 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL--Q-NEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKA-TLDSKAAYK----- 72 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT--T-SEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEE-ESCHHHHHH-----
T ss_pred EEEEECCCHHHHHHHHHHhC--C-CEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEE-eCCHHHHhc-----
Confidence 689999874332 333333 3 5799999999988876653210000 0 0 0112332 234333333
Q ss_pred CccEEEEcCCCCCC--CC-CCC-CcHHHHHHHHHhcCCCcEEEEecCCc
Q 037807 142 TFDAIIIDAFDPIR--PG-HDL-FEGPFFELVAKALRPGGAMCIQAESL 186 (299)
Q Consensus 142 ~fDvIi~D~~~~~~--~~-~~l-~t~ef~~~~~~~LkpgGvlv~~~~s~ 186 (299)
..|+||+-.+.+.. .. ..+ +..+.++.+.+ |+++.+++..+..+
T Consensus 73 ~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST~~ 120 (402)
T 1dlj_A 73 EAELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKSTIP 120 (402)
T ss_dssp HCSEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECSCCC
T ss_pred CCCEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeCCCC
Confidence 36999998766521 10 111 24667778888 89888777644443
No 492
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=86.60 E-value=4.5 Score=36.98 Aligned_cols=70 Identities=13% Similarity=0.248 Sum_probs=45.1
Q ss_pred CCeEEEEecc-ccH--HHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccE
Q 037807 69 PKKVLLIGGG-DGG--ILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDA 145 (299)
Q Consensus 69 ~~~VL~IG~G-~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDv 145 (299)
+.+|.+||+| ..+ .+..+.+.+..+-+-++|.+++..+.+.+.+. +. ...|..+.+.+ ...|+
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g----------~~-~~~~~~ell~~---~~vD~ 67 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEYG----------IP-VFATLAEMMQH---VQMDA 67 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHHT----------CC-EESSHHHHHHH---SCCSE
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcC----------CC-eECCHHHHHcC---CCCCE
Confidence 3589999999 433 34555566655555578999887664443321 12 35788887763 46899
Q ss_pred EEEcCCC
Q 037807 146 IIIDAFD 152 (299)
Q Consensus 146 Ii~D~~~ 152 (299)
|++-.+.
T Consensus 68 V~i~tp~ 74 (387)
T 3moi_A 68 VYIASPH 74 (387)
T ss_dssp EEECSCG
T ss_pred EEEcCCc
Confidence 9986554
No 493
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=86.43 E-value=2.8 Score=40.11 Aligned_cols=97 Identities=13% Similarity=0.120 Sum_probs=60.8
Q ss_pred CeEEEEeccccH--HHHHHHhcCCccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEE
Q 037807 70 KKVLLIGGGDGG--ILREISRHASVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAII 147 (299)
Q Consensus 70 ~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi 147 (299)
.+|-+||+|.=+ +++.++++. -+|++.|.+++.++.+.+.-. ...++. ...+..+.+... +..|+|+
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~G--~~V~v~dr~~~~~~~l~~~g~------~g~~i~-~~~s~~e~v~~l--~~aDvVi 73 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDHG--FVVCAFNRTVSKVDDFLANEA------KGTKVV-GAQSLKEMVSKL--KKPRRII 73 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSTHHHHHHHHTTT------TTSSCE-ECSSHHHHHHTB--CSSCEEE
T ss_pred CEEEEEChhHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHhccc------CCCcee-ccCCHHHHHhhc--cCCCEEE
Confidence 579999988432 344455553 479999999998886655311 011221 135666666543 3579999
Q ss_pred EcCCCCCCCCCCCCcHHHHHHHHHhcCCCcEEEEec
Q 037807 148 IDAFDPIRPGHDLFEGPFFELVAKALRPGGAMCIQA 183 (299)
Q Consensus 148 ~D~~~~~~~~~~l~t~ef~~~~~~~LkpgGvlv~~~ 183 (299)
+-.+.+. ...++++.+...|++|.+++--+
T Consensus 74 l~Vp~~~------~v~~vl~~l~~~L~~g~iIId~s 103 (484)
T 4gwg_A 74 LLVKAGQ------AVDDFIEKLVPLLDTGDIIIDGG 103 (484)
T ss_dssp ECSCSSH------HHHHHHHHHGGGCCTTCEEEECS
T ss_pred EecCChH------HHHHHHHHHHHhcCCCCEEEEcC
Confidence 8776541 12567888888998877666433
No 494
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=86.35 E-value=11 Score=32.09 Aligned_cols=75 Identities=17% Similarity=0.209 Sum_probs=46.7
Q ss_pred CCCeEEEEeccccHHHHHHHhcC--CccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHH------HHHhc-
Q 037807 68 NPKKVLLIGGGDGGILREISRHA--SVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSE------YLKTV- 138 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~------~l~~~- 138 (299)
+.++||+.|++ |++++++++.. ...+|++++.+++-.+...+.+ ..++.++..|..+ .+++.
T Consensus 7 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~D~~~~~~v~~~~~~~~ 77 (259)
T 4e6p_A 7 EGKSALITGSA-RGIGRAFAEAYVREGATVAIADIDIERARQAAAEI--------GPAAYAVQMDVTRQDSIDAAIAATV 77 (259)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--------CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------CCCceEEEeeCCCHHHHHHHHHHHH
Confidence 45778888865 55665554321 1257999999988766555433 2467888888743 22211
Q ss_pred -CCCCccEEEEcCC
Q 037807 139 -QSGTFDAIIIDAF 151 (299)
Q Consensus 139 -~~~~fDvIi~D~~ 151 (299)
.-++.|++|....
T Consensus 78 ~~~g~id~lv~~Ag 91 (259)
T 4e6p_A 78 EHAGGLDILVNNAA 91 (259)
T ss_dssp HHSSSCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 1347999998764
No 495
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=86.34 E-value=12 Score=31.59 Aligned_cols=77 Identities=16% Similarity=0.189 Sum_probs=47.5
Q ss_pred CCeEEEEeccccHHHHHHHhcC--CccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHH------HHHhc--
Q 037807 69 PKKVLLIGGGDGGILREISRHA--SVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSE------YLKTV-- 138 (299)
Q Consensus 69 ~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~------~l~~~-- 138 (299)
.+.||+.|++ |++++++++.. ...+|++++.+++-++...+.+... ..++.++..|..+ .+++.
T Consensus 7 ~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~ 80 (247)
T 2jah_A 7 GKVALITGAS-SGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA-----GAKVHVLELDVADRQGVDAAVASTVE 80 (247)
T ss_dssp TCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-----CCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 4678888865 56666655421 1257999999987766555544321 3478888888643 12111
Q ss_pred CCCCccEEEEcCC
Q 037807 139 QSGTFDAIIIDAF 151 (299)
Q Consensus 139 ~~~~fDvIi~D~~ 151 (299)
.-+..|++|....
T Consensus 81 ~~g~id~lv~nAg 93 (247)
T 2jah_A 81 ALGGLDILVNNAG 93 (247)
T ss_dssp HHSCCSEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 0247899998754
No 496
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=86.26 E-value=4.4 Score=30.91 Aligned_cols=81 Identities=10% Similarity=0.031 Sum_probs=52.3
Q ss_pred CccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHH
Q 037807 91 SVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVA 170 (299)
Q Consensus 91 ~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~ 170 (299)
...+|..||-|+...+..++.+...+ ...+-....++.+.+.......+|+|++|..-+... ..++++.++
T Consensus 14 ~~~~iLivdd~~~~~~~l~~~L~~~~----~~~~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~~~-----g~~~~~~l~ 84 (152)
T 3eul_A 14 EKVRVVVGDDHPLFREGVVRALSLSG----SVNVVGEADDGAAALELIKAHLPDVALLDYRMPGMD-----GAQVAAAVR 84 (152)
T ss_dssp CCEEEEEECSSHHHHHHHHHHHHHHS----SEEEEEEESSHHHHHHHHHHHCCSEEEEETTCSSSC-----HHHHHHHHH
T ss_pred ceEEEEEEcCCHHHHHHHHHHHhhCC----CeEEEEEeCCHHHHHHHHHhcCCCEEEEeCCCCCCC-----HHHHHHHHH
Confidence 34689999999999998888876541 111222466776655543245799999997655321 267788877
Q ss_pred HhcCCCcEEEE
Q 037807 171 KALRPGGAMCI 181 (299)
Q Consensus 171 ~~LkpgGvlv~ 181 (299)
+. .++-.+++
T Consensus 85 ~~-~~~~~ii~ 94 (152)
T 3eul_A 85 SY-ELPTRVLL 94 (152)
T ss_dssp HT-TCSCEEEE
T ss_pred hc-CCCCeEEE
Confidence 65 44444443
No 497
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=86.24 E-value=10 Score=32.55 Aligned_cols=77 Identities=19% Similarity=0.254 Sum_probs=47.2
Q ss_pred CCeEEEEeccccHHHHHHHhcC--CccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHH------HHHhc--
Q 037807 69 PKKVLLIGGGDGGILREISRHA--SVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSE------YLKTV-- 138 (299)
Q Consensus 69 ~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~------~l~~~-- 138 (299)
.+.||+.|++ |++++++++.. ...+|++++.+++-.+...+.+... ..++.++..|..+ .+++.
T Consensus 22 ~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~ 95 (277)
T 2rhc_B 22 SEVALVTGAT-SGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA-----GVEADGRTCDVRSVPEIEALVAAVVE 95 (277)
T ss_dssp SCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCceEEEECCCCCHHHHHHHHHHHHH
Confidence 4678888765 66666655421 1257999999987766554444322 3468888888643 12211
Q ss_pred CCCCccEEEEcCC
Q 037807 139 QSGTFDAIIIDAF 151 (299)
Q Consensus 139 ~~~~fDvIi~D~~ 151 (299)
.-+..|++|....
T Consensus 96 ~~g~iD~lv~~Ag 108 (277)
T 2rhc_B 96 RYGPVDVLVNNAG 108 (277)
T ss_dssp HTCSCSEEEECCC
T ss_pred HhCCCCEEEECCC
Confidence 1257899998764
No 498
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=86.18 E-value=9.4 Score=29.00 Aligned_cols=77 Identities=17% Similarity=0.251 Sum_probs=50.5
Q ss_pred cEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHHHHhcCCCCccEEEEcCCCCCCCCCCCCcHHHHHHHHHh
Q 037807 93 EQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEYLKTVQSGTFDAIIIDAFDPIRPGHDLFEGPFFELVAKA 172 (299)
Q Consensus 93 ~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~t~ef~~~~~~~ 172 (299)
.+|..||-|+...+..++.+... .-.+. ...++.+.+.......+|+|++|..-+... ..++.+.+++.
T Consensus 8 ~~iLivdd~~~~~~~l~~~L~~~-----g~~v~-~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~-----g~~~~~~l~~~ 76 (154)
T 2rjn_A 8 YTVMLVDDEQPILNSLKRLIKRL-----GCNII-TFTSPLDALEALKGTSVQLVISDMRMPEMG-----GEVFLEQVAKS 76 (154)
T ss_dssp CEEEEECSCHHHHHHHHHHHHTT-----TCEEE-EESCHHHHHHHHTTSCCSEEEEESSCSSSC-----HHHHHHHHHHH
T ss_pred CeEEEEcCCHHHHHHHHHHHHHc-----CCeEE-EeCCHHHHHHHHhcCCCCEEEEecCCCCCC-----HHHHHHHHHHh
Confidence 57899999999998888877642 12333 556666666544456799999997655321 26777777775
Q ss_pred cCCCcEEEE
Q 037807 173 LRPGGAMCI 181 (299)
Q Consensus 173 LkpgGvlv~ 181 (299)
. ++-.+++
T Consensus 77 ~-~~~~ii~ 84 (154)
T 2rjn_A 77 Y-PDIERVV 84 (154)
T ss_dssp C-TTSEEEE
T ss_pred C-CCCcEEE
Confidence 4 4443333
No 499
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=86.11 E-value=10 Score=32.45 Aligned_cols=78 Identities=21% Similarity=0.224 Sum_probs=48.8
Q ss_pred CCCeEEEEeccccHHHHHHHhcC--CccEEEEEECCHHHHHHHHhhchhhhcCCCCCCEEEEEccHHHH------HHhc-
Q 037807 68 NPKKVLLIGGGDGGILREISRHA--SVEQIHICEIDTMLINVYKEYFPEIAIGYEDSRVILHVCDGSEY------LKTV- 138 (299)
Q Consensus 68 ~~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~v~~~D~~~~------l~~~- 138 (299)
..++||+.|++ |++++++++.. ...+|++++.++.-.+...+.+... ..++.++..|..+. +++.
T Consensus 30 ~~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~ 103 (272)
T 1yb1_A 30 TGEIVLITGAG-HGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL-----GAKVHTFVVDCSNREDIYSSAKKVK 103 (272)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc-----CCeEEEEEeeCCCHHHHHHHHHHHH
Confidence 35678888855 66776665421 1257999999987766555444332 35788888886432 2111
Q ss_pred -CCCCccEEEEcCC
Q 037807 139 -QSGTFDAIIIDAF 151 (299)
Q Consensus 139 -~~~~fDvIi~D~~ 151 (299)
.-+..|+||....
T Consensus 104 ~~~g~iD~li~~Ag 117 (272)
T 1yb1_A 104 AEIGDVSILVNNAG 117 (272)
T ss_dssp HHTCCCSEEEECCC
T ss_pred HHCCCCcEEEECCC
Confidence 1247899998764
No 500
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=86.09 E-value=2.5 Score=39.85 Aligned_cols=107 Identities=15% Similarity=0.192 Sum_probs=61.5
Q ss_pred CCeEEEEeccccHHH--HHHHhcCCccEEEEEECCHHHHHHHHhhchhhh-cC----C--CCCCEEEEEccHHHHHHhcC
Q 037807 69 PKKVLLIGGGDGGIL--REISRHASVEQIHICEIDTMLINVYKEYFPEIA-IG----Y--EDSRVILHVCDGSEYLKTVQ 139 (299)
Q Consensus 69 ~~~VL~IG~G~G~~~--~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~-~~----~--~~~rv~v~~~D~~~~l~~~~ 139 (299)
..+|-+||+|.=+.+ ..+++ + .+|+++|+|++.++..++...... .. + ...++++ ..|..+.++
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~--G-~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~-ttd~~ea~~--- 108 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ--N-HEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRA-TTDKHDAYR--- 108 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT--T-SEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEE-ESCHHHHHT---
T ss_pred CCEEEEECcCHHHHHHHHHHHc--C-CeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEE-EcCHHHHHh---
Confidence 358999999854433 33333 3 579999999999988776321000 00 0 0123332 345444433
Q ss_pred CCCccEEEEcCCCCCCCC---CCC-CcHHHHHHHHHhcCCCcEEEEecCC
Q 037807 140 SGTFDAIIIDAFDPIRPG---HDL-FEGPFFELVAKALRPGGAMCIQAES 185 (299)
Q Consensus 140 ~~~fDvIi~D~~~~~~~~---~~l-~t~ef~~~~~~~LkpgGvlv~~~~s 185 (299)
..|+||+-.+.+.... ..+ +-.+..+.+.+ |++|-+++..++.
T Consensus 109 --~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv 155 (432)
T 3pid_A 109 --NADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTI 155 (432)
T ss_dssp --TCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCC
T ss_pred --CCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCC
Confidence 4699998776653111 111 23556677788 9998888765543
Done!