BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037816
(648 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9MA85|PP215_ARATH Pentatricopeptide repeat-containing protein At3g05340
OS=Arabidopsis thaliana GN=PCMP-E83 PE=2 SV=2
Length = 658
Score = 832 bits (2150), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/649 (63%), Positives = 497/649 (76%), Gaps = 5/649 (0%)
Query: 1 MKSKWVFLKLNSNFPFC-SSLVSPFITKIIQDPTSSTSKLVLDNYVDISRLLSISAKEGH 59
M S+WV KL S+ P C S+++SP I Q P S +L N+VD+S LLSI +EG
Sbjct: 1 MNSRWVIQKLTSHLPSCLSTVLSPSKILIRQSPNYQVSTFLL-NHVDMSLLLSICGREGW 59
Query: 60 F-HLGPSLHASFIKTFEPFDNQNVYNVPNATVIWNSLLSFYLKCDQMRNAVKLFDDMPMR 118
F HLGP LHAS IK E F+ + NA V+WNSLLS Y KC ++ +A+KLFD+MPMR
Sbjct: 60 FPHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMR 119
Query: 119 DTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFTIILSACDRSELSLVSKMI 178
D +S N + GFLRN E + GF KR L G + D A+ TI+LS CD E LV+KMI
Sbjct: 120 DVISQNIVFYGFLRNRETESGFVLLKRMLGSGGF--DHATLTIVLSVCDTPEFCLVTKMI 177
Query: 179 HCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVITWTAVISGLVQNQLY 238
H L L GY++E++VGN LITSYFKCG S SGR VF M RNVIT TAVISGL++N+L+
Sbjct: 178 HALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELH 237
Query: 239 EEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGILWKLALQSDLCIESAL 298
E+GL+LF M GL++PNS+TYLS++ ACSG Q + EG+QIH +LWK ++S+LCIESAL
Sbjct: 238 EDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESAL 297
Query: 299 MDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLFVKMVKAGIEIDP 358
MDMYSKCGS+EDAW IFE E+D VSMTVILVG AQNG EEEA+Q F++M++AG+EID
Sbjct: 298 MDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDA 357
Query: 359 NMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSR 418
N+VSAVLGV +D SLGLGKQ+HSL+IK F+ N FVNNGLINMYSKCGDL DS VF R
Sbjct: 358 NVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRR 417
Query: 419 MAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKG 478
M RN VSWNSMIAAFARHG+G AL+LYEEM V+PTDVTFLSLLHACSHVGL++KG
Sbjct: 418 MPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKG 477
Query: 479 MEFLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEARSFIERMPVKPDVLVWQALLGACS 538
E L M EVH I PR EHY C++DM+GRAGLL EA+SFI+ +P+KPD +WQALLGACS
Sbjct: 478 RELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACS 537
Query: 539 IHGDSEMGKYAAEKLFLAQPDSPAPYILMANIYSCSGRWKERAKAIKRMKEMGVDKETGI 598
HGD+E+G+YAAE+LF PDS + +IL+ANIYS G+WKERAK IKRMK MGV KETGI
Sbjct: 538 FHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGI 597
Query: 599 SWIEIEKQVHSFVVDDKMHPQADTIHGVLAELLRLMIDEGYVPNKRFIL 647
S IEIE + HSFVV+DK+HPQA+ I+ VL+ L +M+DEGY P+KRFIL
Sbjct: 598 SSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPVMVDEGYRPDKRFIL 646
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 392 bits (1007), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/596 (34%), Positives = 336/596 (56%), Gaps = 11/596 (1%)
Query: 47 ISRLLSISAKEGHFHLGPSLHASFIKTFEPFDNQNVYNVPNATVIWNSLLSFYLKCDQMR 106
++ L+ + +G G LHA K +N+ I +LL+ Y KC +
Sbjct: 392 LASLVVACSADGTLFRGQQLHAYTTKLGFASNNK----------IEGALLNLYAKCADIE 441
Query: 107 NAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFTIILSAC 166
A+ F + + + V WN M+ + + F F R +++ +Q ++ IL C
Sbjct: 442 TALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIF-RQMQIEEIVPNQYTYPSILKTC 500
Query: 167 DRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVITWT 226
R + + IH + ++ V + LI Y K G + + ++V++WT
Sbjct: 501 IRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWT 560
Query: 227 AVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGILWKL 286
+I+G Q ++ L F +M I + + ++V AC+GLQAL EG+QIH
Sbjct: 561 TMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS 620
Query: 287 ALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLF 346
SDL ++AL+ +YS+CG +E+++ FE E D ++ ++ GF Q+G EEA+++F
Sbjct: 621 GFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVF 680
Query: 347 VKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKC 406
V+M + GI+ + + + ++ GKQ+H++I K+ + S V N LI+MY+KC
Sbjct: 681 VRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKC 740
Query: 407 GDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLL 466
G + D+ K F ++ +N VSWN++I A+++HG G +AL+ +++M V P VT + +L
Sbjct: 741 GSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVL 800
Query: 467 HACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEARSFIERMPVKPD 526
ACSH+GLV+KG+ + +SM + +SP+ EHY CVVDM+ RAGLL A+ FI+ MP+KPD
Sbjct: 801 SACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPD 860
Query: 527 VLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDSPAPYILMANIYSCSGRWKERAKAIKR 586
LVW+ LL AC +H + E+G++AA L +P+ A Y+L++N+Y+ S +W R ++
Sbjct: 861 ALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQK 920
Query: 587 MKEMGVDKETGISWIEIEKQVHSFVVDDKMHPQADTIHGVLAELLRLMIDEGYVPN 642
MKE GV KE G SWIE++ +HSF V D+ HP AD IH +L + + GYV +
Sbjct: 921 MKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQD 976
Score = 213 bits (543), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 225/445 (50%), Gaps = 8/445 (1%)
Query: 95 LLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQL 154
L FYL + A K+FD+MP R +WN M+ FG F R +
Sbjct: 126 LFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTP- 184
Query: 155 DQASFTIILSACDRSELSL-VSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKV 213
++ +F+ +L AC ++ V + IH + G + V N LI Y + G R+V
Sbjct: 185 NEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRV 244
Query: 214 FGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQAL 273
F +R+++ +W A+ISGL +N+ E ++LF M++ I P + S + AC +++L
Sbjct: 245 FDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESL 304
Query: 274 CEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGF 333
G Q+HG++ KL SD + +AL+ +Y G++ A IF + D V+ ++ G
Sbjct: 305 EIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGL 364
Query: 334 AQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNP 393
+Q G+ E+AM+LF +M G+E D N +++++ D +L G+Q+H+ K F SN
Sbjct: 365 SQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNN 424
Query: 394 FVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLE 453
+ L+N+Y+KC D+E ++ F N V WN M+ A+ + + ++ +M++E
Sbjct: 425 KIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIE 484
Query: 454 GVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYAC--VVDMVGRAGLL 511
+ P T+ S+L C +G + G + +++ + + + Y C ++DM + G L
Sbjct: 485 EIVPNQYTYPSILKTCIRLGDLELGEQI---HSQIIKTNFQLNAYVCSVLIDMYAKLGKL 541
Query: 512 IEARSFIERMPVKPDVLVWQALLGA 536
A + R K DV+ W ++
Sbjct: 542 DTAWDILIRFAGK-DVVSWTTMIAG 565
Score = 199 bits (506), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 138/500 (27%), Positives = 233/500 (46%), Gaps = 25/500 (5%)
Query: 48 SRLLSISAKEGHFHLGPSLHASFIKTFEPFDNQNVYNVPNATVIWNSLLSFYLKCDQMRN 107
S +LS K +G LH +K + T + N+L+S Y + +
Sbjct: 292 SSVLSACKKIESLEIGEQLHGLVLK----------LGFSSDTYVCNALVSLYFHLGNLIS 341
Query: 108 AVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFTIILSACD 167
A +F +M RD V++NT+++G + G + FKR + L + D + ++ AC
Sbjct: 342 AEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR-MHLDGLEPDSNTLASLVVACS 400
Query: 168 RSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVITWTA 227
+ +H G+ + AL+ Y KC + F E V NV+ W
Sbjct: 401 ADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNV 460
Query: 228 --VISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGILWK 285
V GL+ + ++F +M + I PN TY S + C L L G QIH + K
Sbjct: 461 MLVAYGLLDD--LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK 518
Query: 286 LALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQL 345
Q + + S L+DMY+K G ++ AW I D VS T ++ G+ Q F+++A+
Sbjct: 519 TNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTT 578
Query: 346 FVKMVKAGIEID----PNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLIN 401
F +M+ GI D N VSA G+ +L G+QIH+ S F+S+ N L+
Sbjct: 579 FRQMLDRGIRSDEVGLTNAVSACAGL----QALKEGQQIHAQACVSGFSSDLPFQNALVT 634
Query: 402 MYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVT 461
+YS+CG +E+S F + ++++WN++++ F + GN +AL ++ M EG++ + T
Sbjct: 635 LYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFT 694
Query: 462 FLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEARSFIERM 521
F S + A S + +G + +T+ S E ++ M + G + +A +
Sbjct: 695 FGSAVKAASETANMKQGKQVHAVITKTGYDS-ETEVCNALISMYAKCGSISDAEKQFLEV 753
Query: 522 PVKPDVLVWQALLGACSIHG 541
K +V W A++ A S HG
Sbjct: 754 STKNEV-SWNAIINAYSKHG 772
Score = 199 bits (506), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 138/460 (30%), Positives = 231/460 (50%), Gaps = 7/460 (1%)
Query: 87 NATVIWNSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRS 146
++TV+ N L+ Y + + A ++FD + ++D SW M+SG +N F
Sbjct: 220 DSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDM 279
Query: 147 LELGFYQLDQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGS 206
LG A F+ +LSAC + E + + +H LV G+ + V NAL++ YF G+
Sbjct: 280 YVLGIMPTPYA-FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGN 338
Query: 207 SSSGRKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMA 266
S +F M R+ +T+ +I+GL Q E+ ++LF +MHL + P+S T S V+A
Sbjct: 339 LISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVA 398
Query: 267 CSGLQALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSM 326
CS L G+Q+H KL S+ IE AL+++Y+KC +E A F E + V
Sbjct: 399 CSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLW 458
Query: 327 TVILVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVS--AVLGVFGVDTSLGLGKQIHSLI 384
V+LV + + ++F +M EI PN + ++L L LG+QIHS I
Sbjct: 459 NVMLVAYGLLDDLRNSFRIFRQMQIE--EIVPNQYTYPSILKTCIRLGDLELGEQIHSQI 516
Query: 385 IKSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKAL 444
IK++F N +V + LI+MY+K G L+ + + R A ++ VSW +MIA + ++ KAL
Sbjct: 517 IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKAL 576
Query: 445 ELYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDM 504
+ +M G+ +V + + AC+ + + +G + + + V S +V +
Sbjct: 577 TTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQACVSGFSSDLPFQNALVTL 635
Query: 505 VGRAGLLIEARSFIERMPVKPDVLVWQALLGACSIHGDSE 544
R G + E+ E+ D + W AL+ G++E
Sbjct: 636 YSRCGKIEESYLAFEQTEA-GDNIAWNALVSGFQQSGNNE 674
Score = 156 bits (395), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 168/329 (51%), Gaps = 2/329 (0%)
Query: 162 ILSACDRSELSL-VSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVR 220
+L C ++ SL + +H + G + + L Y G KVF EM R
Sbjct: 90 LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPER 149
Query: 221 NVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQ-ALCEGRQI 279
+ TW +I L L E LFV+M + PN T+ + AC G A QI
Sbjct: 150 TIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQI 209
Query: 280 HGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFE 339
H + L+ + + L+D+YS+ G V+ A ++F+ D S ++ G ++N E
Sbjct: 210 HARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECE 269
Query: 340 EEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGL 399
EA++LF M GI P S+VL SL +G+Q+H L++K F+S+ +V N L
Sbjct: 270 AEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNAL 329
Query: 400 INMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTD 459
+++Y G+L + +FS M+ R++V++N++I ++ G G KA+EL++ M L+G+EP
Sbjct: 330 VSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDS 389
Query: 460 VTFLSLLHACSHVGLVNKGMEFLKSMTEV 488
T SL+ ACS G + +G + T++
Sbjct: 390 NTLASLVVACSADGTLFRGQQLHAYTTKL 418
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/440 (25%), Positives = 206/440 (46%), Gaps = 26/440 (5%)
Query: 40 VLDNYVDISRLLSISAKEGHFHLGPSLHASFIKTFEPFDNQNVYNVPNATVIWNSLLSFY 99
++ N +L + G LG +H+ IKT N + + L+ Y
Sbjct: 486 IVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT----------NFQLNAYVCSVLIDMY 535
Query: 100 LKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASF 159
K ++ A + +D VSW TM++G+ + D F++ L+ G + D+
Sbjct: 536 AKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGI-RSDEVGL 594
Query: 160 TIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRV 219
T +SAC + + IH + G+ ++ NAL+T Y +CG F +
Sbjct: 595 TNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEA 654
Query: 220 RNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQI 279
+ I W A++SG Q+ EE L++FV+M+ I+ N+ T+ S+V A S + +G+Q+
Sbjct: 655 GDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQV 714
Query: 280 HGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFE 339
H ++ K S+ + +AL+ MY+KCGS+ DA + F + VS I+ ++++GF
Sbjct: 715 HAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFG 774
Query: 340 EEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQ----IHSLIIKSDFTSNPFV 395
EA+ F +M+ + + PN V+ V GV + +GL + S+ + + P
Sbjct: 775 SEALDSFDQMIHSNVR--PNHVTLV-GVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEH 831
Query: 396 NNGLINMYSKCGDLEDSIKVFSRMAPR-NSVSWNSMIAAFARHGN----GFKALELYEEM 450
+++M ++ G L + + M + +++ W ++++A H N F A L E
Sbjct: 832 YVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLE-- 889
Query: 451 KLEGVEPTDVTFLSLLHACS 470
LE + LS L+A S
Sbjct: 890 -LEPEDSATYVLLSNLYAVS 908
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 1/173 (0%)
Query: 366 GVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSV 425
G + SL G+++HS I+K SN ++ L + Y GDL + KVF M R
Sbjct: 93 GCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIF 152
Query: 426 SWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSM 485
+WN MI A + L+ M E V P + TF +L AC + +E + +
Sbjct: 153 TWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHAR 212
Query: 486 TEVHRISPRAEHYACVVDMVGRAGLLIEARSFIERMPVKPDVLVWQALLGACS 538
+ ++D+ R G + AR + + +K D W A++ S
Sbjct: 213 ILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK-DHSSWVAMISGLS 264
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 389 bits (1000), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/588 (35%), Positives = 343/588 (58%), Gaps = 12/588 (2%)
Query: 61 HLGPSLHASFIKTFEPFDNQNVYNVPNATVIWNSLLSFYLKCDQMRNAVKLFDDMPMRDT 120
H G LH +K+ F +N + NSL++FYLK ++ +A K+FD+M RD
Sbjct: 212 HGGEQLHGFILKS--GFGERNS--------VGNSLVAFYLKNQRVDSARKVFDEMTERDV 261
Query: 121 VSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFTIILSACDRSELSLVSKMIHC 180
+SWN++++G++ NG + G F + L G ++D A+ + + C S L + + +H
Sbjct: 262 ISWNSIINGYVSNGLAEKGLSVFVQMLVSGI-EIDLATIVSVFAGCADSRLISLGRAVHS 320
Query: 181 LVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVITWTAVISGLVQNQLYEE 240
+ + E N L+ Y KCG S + VF EM R+V+++T++I+G + L E
Sbjct: 321 IGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGE 380
Query: 241 GLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGILWKLALQSDLCIESALMD 300
+KLF +M I+P+ T + + C+ + L EG+++H + + L D+ + +ALMD
Sbjct: 381 AVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMD 440
Query: 301 MYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLF-VKMVKAGIEIDPN 359
MY+KCGS+++A +F D +S I+ G+++N + EA+ LF + + + D
Sbjct: 441 MYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDER 500
Query: 360 MVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRM 419
V+ VL ++ G++IH I+++ + S+ V N L++MY+KCG L + +F +
Sbjct: 501 TVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDI 560
Query: 420 APRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGM 479
A ++ VSW MIA + HG G +A+ L+ +M+ G+E +++F+SLL+ACSH GLV++G
Sbjct: 561 ASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGW 620
Query: 480 EFLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEARSFIERMPVKPDVLVWQALLGACSI 539
F M +I P EHYAC+VDM+ R G LI+A FIE MP+ PD +W ALL C I
Sbjct: 621 RFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRI 680
Query: 540 HGDSEMGKYAAEKLFLAQPDSPAPYILMANIYSCSGRWKERAKAIKRMKEMGVDKETGIS 599
H D ++ + AEK+F +P++ Y+LMANIY+ + +W++ + KR+ + G+ K G S
Sbjct: 681 HHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCS 740
Query: 600 WIEIEKQVHSFVVDDKMHPQADTIHGVLAELLRLMIDEGYVPNKRFIL 647
WIEI+ +V+ FV D +P+ + I L ++ MI+EGY P ++ L
Sbjct: 741 WIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYAL 788
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 134/448 (29%), Positives = 235/448 (52%), Gaps = 12/448 (2%)
Query: 99 YLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQAS 158
Y C ++ A ++FD++ + + WN +++ ++G+F G FK+ + G ++D +
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGV-EMDSYT 197
Query: 159 FTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMR 218
F+ + + + +H + G+ E +VGN+L+ Y K S RKVF EM
Sbjct: 198 FSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMT 257
Query: 219 VRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQ 278
R+VI+W ++I+G V N L E+GL +FV+M + I + T +S C+ + + GR
Sbjct: 258 ERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRA 317
Query: 279 IHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGF 338
+H I K + + L+DMYSKCG ++ A +F + VS T ++ G+A+ G
Sbjct: 318 VHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGL 377
Query: 339 EEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNG 398
EA++LF +M + GI D V+AVL L GK++H I ++D + FV+N
Sbjct: 378 AGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNA 437
Query: 399 LINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELY----EEMKLEG 454
L++MY+KCG ++++ VFS M ++ +SWN++I ++++ +AL L+ EE +
Sbjct: 438 LMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRF-- 495
Query: 455 VEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYA-CVVDMVGRAGLLIE 513
P + T +L AC+ + +KG E + S R H A +VDM + G L+
Sbjct: 496 -SPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR--HVANSLVDMYAKCGALLL 552
Query: 514 ARSFIERMPVKPDVLVWQALLGACSIHG 541
A + + K D++ W ++ +HG
Sbjct: 553 AHMLFDDIASK-DLVSWTVMIAGYGMHG 579
Score = 176 bits (446), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 213/432 (49%), Gaps = 9/432 (2%)
Query: 107 NAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFTIILSAC 166
+++ FD R NT + F +G + S G + +D + +L C
Sbjct: 52 DSITTFD----RSVTDANTQLRRFCESGNLENAVKLLCVS---GKWDIDPRTLCSVLQLC 104
Query: 167 DRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVITWT 226
S+ K + + G+ + +G+ L Y CG +VF E+++ + W
Sbjct: 105 ADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWN 164
Query: 227 AVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGILWKL 286
+++ L ++ + + LF KM + +S T+ + S L+++ G Q+HG + K
Sbjct: 165 ILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKS 224
Query: 287 ALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLF 346
+ ++L+ Y K V+ A ++F+ E D +S I+ G+ NG E+ + +F
Sbjct: 225 GFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVF 284
Query: 347 VKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKC 406
V+M+ +GIEID + +V + LG+ +HS+ +K+ F+ N L++MYSKC
Sbjct: 285 VQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKC 344
Query: 407 GDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLL 466
GDL+ + VF M+ R+ VS+ SMIA +AR G +A++L+EEM+ EG+ P T ++L
Sbjct: 345 GDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVL 404
Query: 467 HACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEARSFIERMPVKPD 526
+ C+ L+++G + + E + + ++DM + G + EA M VK D
Sbjct: 405 NCCARYRLLDEGKRVHEWIKE-NDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK-D 462
Query: 527 VLVWQALLGACS 538
++ W ++G S
Sbjct: 463 IISWNTIIGGYS 474
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 387 bits (993), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/608 (34%), Positives = 340/608 (55%), Gaps = 17/608 (2%)
Query: 43 NYVDISRLLSISAKEGHFHLGPSLHASFIKTFEPFDNQNVYNVPNATVIWNSLLSFYLKC 102
N + L + A+EG G +H +K + + NSL++ YLKC
Sbjct: 193 NSFTFAAALGVLAEEGVGGRGLQVHTVVVKN----------GLDKTIPVSNSLINLYLKC 242
Query: 103 DQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFTII 162
+R A LFD ++ V+WN+M+SG+ NG G F S+ L + +L ++SF +
Sbjct: 243 GNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMF-YSMRLNYVRLSESSFASV 301
Query: 163 LSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMR-VRN 221
+ C + ++ +HC V G+ + + AL+ +Y KC + ++F E+ V N
Sbjct: 302 IKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGN 361
Query: 222 VITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHG 281
V++WTA+ISG +QN EE + LF +M + PN TY + A + ++H
Sbjct: 362 VVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP----SEVHA 417
Query: 282 ILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEE 341
+ K + + +AL+D Y K G VE+A ++F ++ D V+ + +L G+AQ G E
Sbjct: 418 QVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEA 477
Query: 342 AMQLFVKMVKAGIEIDPNMVSAVLGV-FGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLI 400
A+++F ++ K GI+ + S++L V + S+G GKQ H IKS S+ V++ L+
Sbjct: 478 AIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALL 537
Query: 401 NMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDV 460
MY+K G++E + +VF R ++ VSWNSMI+ +A+HG KAL++++EMK V+ V
Sbjct: 538 TMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGV 597
Query: 461 TFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEARSFIER 520
TF+ + AC+H GLV +G ++ M +I+P EH +C+VD+ RAG L +A IE
Sbjct: 598 TFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIEN 657
Query: 521 MPVKPDVLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDSPAPYILMANIYSCSGRWKER 580
MP +W+ +L AC +H +E+G+ AAEK+ +P+ A Y+L++N+Y+ SG W+ER
Sbjct: 658 MPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQER 717
Query: 581 AKAIKRMKEMGVDKETGISWIEIEKQVHSFVVDDKMHPQADTIHGVLAELLRLMIDEGYV 640
AK K M E V KE G SWIE++ + +SF+ D+ HP D I+ L +L + D GY
Sbjct: 718 AKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYE 777
Query: 641 PNKRFILH 648
P+ ++L
Sbjct: 778 PDTSYVLQ 785
Score = 205 bits (521), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 141/502 (28%), Positives = 248/502 (49%), Gaps = 27/502 (5%)
Query: 48 SRLLSISAKEGHFHLGPSLHASFIKTFEPFDNQNVYNVPNATVIWNSLLSFYLKCDQMRN 107
S +L +SA G LH IK F D+ +V SL+ Y+K ++
Sbjct: 97 SSVLKVSATLCDELFGRQLHCQCIK-FGFLDDVSV---------GTSLVDTYMKGSNFKD 146
Query: 108 AVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFTIILSACD 167
K+FD+M R+ V+W T++SG+ RN D F R G Q + +F L
Sbjct: 147 GRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEG-TQPNSFTFAAALGVLA 205
Query: 168 RSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVITWTA 227
+ +H +V G ++ + V N+LI Y KCG+ R +F + V++V+TW +
Sbjct: 206 EEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNS 265
Query: 228 VISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGILWKLA 287
+ISG N L E L +F M L + + ++ S + C+ L+ L Q+H + K
Sbjct: 266 MISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYG 325
Query: 288 LQSDLCIESALMDMYSKCGSVEDAWQIF-EFAEELDGVSMTVILVGFAQNGFEEEAMQLF 346
D I +ALM YSKC ++ DA ++F E + VS T ++ GF QN +EEA+ LF
Sbjct: 326 FLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLF 385
Query: 347 VKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKC 406
+M + G+ + S +L V + ++H+ ++K+++ + V L++ Y K
Sbjct: 386 SEMKRKGVRPNEFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKL 441
Query: 407 GDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLL 466
G +E++ KVFS + ++ V+W++M+A +A+ G A++++ E+ G++P + TF S+L
Sbjct: 442 GKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSIL 501
Query: 467 HACSHVGL-VNKGMEFLKSMTEVHRISPRAEHYACV----VDMVGRAGLLIEARSFIERM 521
+ C+ + +G +F I R + CV + M + G + A +R
Sbjct: 502 NVCAATNASMGQGKQF-----HGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQ 556
Query: 522 PVKPDVLVWQALLGACSIHGDS 543
K D++ W +++ + HG +
Sbjct: 557 REK-DLVSWNSMISGYAQHGQA 577
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 132/458 (28%), Positives = 236/458 (51%), Gaps = 24/458 (5%)
Query: 104 QMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFTIIL 163
++ NA LFD P RD S+ +++ GF R+G F LG ++D + F+ +L
Sbjct: 42 RLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGM-EMDCSIFSSVL 100
Query: 164 ----SACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRV 219
+ CD L + +HC G+ ++V+VG +L+ +Y K + GRKVF EM+
Sbjct: 101 KVSATLCD----ELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKE 156
Query: 220 RNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSS--VMACSGLQALCEGR 277
RNV+TWT +ISG +N + +E L LF++M PNS T+ ++ V+A G+ G
Sbjct: 157 RNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGG--RGL 214
Query: 278 QIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNG 337
Q+H ++ K L + + ++L+++Y KCG+V A +F+ E V+ ++ G+A NG
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG 274
Query: 338 FEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNN 397
+ EA+ +F M + + + ++V+ + L +Q+H ++K F + +
Sbjct: 275 LDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRT 334
Query: 398 GLINMYSKCGDLEDSIKVFSRMA-PRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVE 456
L+ YSKC + D++++F + N VSW +MI+ F ++ +A++L+ EMK +GV
Sbjct: 335 ALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVR 394
Query: 457 PTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEARS 516
P + T+ +L A + + +K+ E A ++D + G + EA
Sbjct: 395 PNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTA-----LLDAYVKLGKVEEAAK 449
Query: 517 FIERMPVKPDVLVWQALLGACSIHGDSEMGKYAAEKLF 554
+ K D++ W A+L + G++E AA K+F
Sbjct: 450 VFSGIDDK-DIVAWSAMLAGYAQTGETE----AAIKMF 482
Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 154/277 (55%), Gaps = 13/277 (4%)
Query: 205 GSSSSGR-----KVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMH-LGLINPNSL 258
G+ SS R +F + R+ ++ +++ G ++ +E +LF+ +H LG+ S+
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 259 TYLSSVMACSGLQALCE---GRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIF 315
SSV+ S LC+ GRQ+H K D+ + ++L+D Y K + +D ++F
Sbjct: 96 --FSSVLKVSA--TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVF 151
Query: 316 EFAEELDGVSMTVILVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLG 375
+ +E + V+ T ++ G+A+N +E + LF++M G + + +A LGV + G
Sbjct: 152 DEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGG 211
Query: 376 LGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFA 435
G Q+H++++K+ V+N LIN+Y KCG++ + +F + ++ V+WNSMI+ +A
Sbjct: 212 RGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA 271
Query: 436 RHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHV 472
+G +AL ++ M+L V ++ +F S++ C+++
Sbjct: 272 ANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANL 308
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 380 bits (977), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/552 (38%), Positives = 310/552 (56%), Gaps = 7/552 (1%)
Query: 93 NSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMG---FGFFKRSLEL 149
SL+ Y K + + +K+F MP R+T +W+TMVSG+ G + F F R E
Sbjct: 157 TSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEE 216
Query: 150 GFYQLDQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSS 209
G FT +LS+ + + + IHC+ G V + NAL+T Y KC S +
Sbjct: 217 G--SDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNE 274
Query: 210 GRKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSG 269
K+F RN ITW+A+++G QN E +KLF +M I P+ T + + ACS
Sbjct: 275 ACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSD 334
Query: 270 LQALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVI 329
+ L EG+Q+H L KL + L +AL+DMY+K G + DA + F+ +E D T +
Sbjct: 335 ICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSL 394
Query: 330 LVGFAQNGFEEEAMQLFVKMVKAGI-EIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSD 388
+ G+ QN EEA+ L+ +M AGI DP M S VL +L LGKQ+H IK
Sbjct: 395 ISGYVQNSDNEEALILYRRMKTAGIIPNDPTMAS-VLKACSSLATLELGKQVHGHTIKHG 453
Query: 389 FTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYE 448
F + + L MYSKCG LED VF R ++ VSWN+MI+ + +G G +ALEL+E
Sbjct: 454 FGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFE 513
Query: 449 EMKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRA 508
EM EG+EP DVTF++++ ACSH G V +G + M++ + P+ +HYAC+VD++ RA
Sbjct: 514 EMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRA 573
Query: 509 GLLIEARSFIERMPVKPDVLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDSPAPYILMA 568
G L EA+ FIE + + +W+ LL AC HG E+G YA EKL + Y+ ++
Sbjct: 574 GQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLS 633
Query: 569 NIYSCSGRWKERAKAIKRMKEMGVDKETGISWIEIEKQVHSFVVDDKMHPQADTIHGVLA 628
IY+ GR ++ + K M+ GV KE G SWIE++ Q H FVV D MHP + ++
Sbjct: 634 GIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVC 693
Query: 629 ELLRLMIDEGYV 640
+ R MI+EG+V
Sbjct: 694 LVSRQMIEEGFV 705
Score = 202 bits (514), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 141/490 (28%), Positives = 240/490 (48%), Gaps = 11/490 (2%)
Query: 93 NSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFY 152
N L++FY KC ++ A +F+ + +D VSWN++++G+ +NG + + E+
Sbjct: 53 NVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQ 112
Query: 153 QLDQASFTI--ILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSG 210
+ ++T+ I A + S V + H LV ++ V +L+ Y K G G
Sbjct: 113 DILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDG 172
Query: 211 RKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLF----VKMHLGLINPNSLTYLSSVMA 266
KVF M RN TW+ ++SG EE +K+F + G + T + S +A
Sbjct: 173 LKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLA 232
Query: 267 CSGLQALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSM 326
+ L GRQIH I K L + + +AL+ MYSKC S+ +A ++F+ + + + ++
Sbjct: 233 ATIYVGL--GRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITW 290
Query: 327 TVILVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIK 386
+ ++ G++QNG EA++LF +M AGI+ + VL L GKQ+HS ++K
Sbjct: 291 SAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLK 350
Query: 387 SDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALEL 446
F + F L++MY+K G L D+ K F + R+ W S+I+ + ++ + +AL L
Sbjct: 351 LGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALIL 410
Query: 447 YEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVG 506
Y MK G+ P D T S+L ACS + + G + + T H + + M
Sbjct: 411 YRRMKTAGIIPNDPTMASVLKACSSLATLELGKQ-VHGHTIKHGFGLEVPIGSALSTMYS 469
Query: 507 RAGLLIEARSFIERMPVKPDVLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDSPAPYIL 566
+ G L + R P K DV+ W A++ S +G + E++ LA+ P
Sbjct: 470 KCGSLEDGNLVFRRTPNK-DVVSWNAMISGLSHNGQGDEALELFEEM-LAEGMEPDDVTF 527
Query: 567 MANIYSCSGR 576
+ I +CS +
Sbjct: 528 VNIISACSHK 537
Score = 182 bits (462), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 203/382 (53%), Gaps = 17/382 (4%)
Query: 173 LVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVITWTAVISGL 232
+ + +H + G + N L+ Y KCG + +F + ++V++W ++I+G
Sbjct: 31 VAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGY 90
Query: 233 VQNQLYEEG---LKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGILWKLALQ 289
QN ++LF +M I PN+ T A S LQ+ GRQ H ++ K++
Sbjct: 91 SQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSF 150
Query: 290 SDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQ---LF 346
D+ ++++L+ MY K G VED ++F + E + + + ++ G+A G EEA++ LF
Sbjct: 151 GDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLF 210
Query: 347 VKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKC 406
++ + G + D + +AVL +GLG+QIH + IK+ ++N L+ MYSKC
Sbjct: 211 LREKEEGSDSDY-VFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKC 269
Query: 407 GDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLL 466
L ++ K+F RNS++W++M+ ++++G +A++L+ M G++P++ T + +L
Sbjct: 270 ESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVL 329
Query: 467 HACSHVGLVNKGME----FLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEARSFIERMP 522
+ACS + + +G + LK E H + A +VDM +AG L +AR + +
Sbjct: 330 NACSDICYLEEGKQLHSFLLKLGFERHLFATTA-----LVDMYAKAGCLADARKGFDCLQ 384
Query: 523 VKPDVLVWQALLGACSIHGDSE 544
+ DV +W +L+ + D+E
Sbjct: 385 ER-DVALWTSLISGYVQNSDNE 405
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 133/281 (47%), Gaps = 40/281 (14%)
Query: 89 TVIWNSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLE 148
++ W+++++ Y + + AVKLF M F G
Sbjct: 287 SITWSAMVTGYSQNGESLEAVKLFSRM--------------------FSAG--------- 317
Query: 149 LGFYQLDQASFTI--ILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGS 206
+ + +TI +L+AC K +H + G+E + AL+ Y K G
Sbjct: 318 -----IKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGC 372
Query: 207 SSSGRKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMA 266
+ RK F ++ R+V WT++ISG VQN EE L L+ +M I PN T S + A
Sbjct: 373 LADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKA 432
Query: 267 CSGLQALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSM 326
CS L L G+Q+HG K ++ I SAL MYSKCGS+ED +F D VS
Sbjct: 433 CSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSW 492
Query: 327 TVILVGFAQNGFEEEAMQLFVKMVKAGIEIDP----NMVSA 363
++ G + NG +EA++LF +M+ G+E D N++SA
Sbjct: 493 NAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISA 533
Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 178/373 (47%), Gaps = 46/373 (12%)
Query: 253 INPNSLTYLSSVMACSGLQALCEGRQIHGILWKLALQSDLCIESA--LMDMYSKCGSVED 310
+NP++ T L + S + L GR +HG + + + CI+ A L++ Y+KCG +
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTG--ASTCIQHANVLVNFYAKCGKLAK 67
Query: 311 AWQIFEFAEELDGVSMTVILVGFAQNGFEEEA---MQLFVKMVKAGIEIDPNMVSAVLGV 367
A IF D VS ++ G++QNG + MQLF +M +I PN + + G+
Sbjct: 68 AHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQ--DILPNAYT-LAGI 124
Query: 368 FGVDTSL---GLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNS 424
F ++SL +G+Q H+L++K + +V+ L+ MY K G +ED +KVF+ M RN+
Sbjct: 125 FKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNT 184
Query: 425 VSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTF-----LSLLHACSHVGLVNKGM 479
+W++M++ +A G +A++++ E E +D + LS L A +VGL +
Sbjct: 185 YTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQ-- 242
Query: 480 EFLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEARSFIERMPVKPDVLVWQALLGACSI 539
+ +T + + +V M + L EA + + + + W A++ S
Sbjct: 243 --IHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDR-NSITWSAMVTGYSQ 299
Query: 540 HGDSEMGKYAAEKLFLAQPDSPAPYILMANIYSCSGRWKERAKAIKRMKEMGVDKETGIS 599
+G+S ++F A P+ Y ++ + +CS I
Sbjct: 300 NGESLEAVKLFSRMFSAGI-KPSEYTIVGVLNACS----------------------DIC 336
Query: 600 WIEIEKQVHSFVV 612
++E KQ+HSF++
Sbjct: 337 YLEEGKQLHSFLL 349
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 40 VLDNYVDISRLLSISAKEGHFHLGPSLHASFIKTFEPFDNQNVYNVPNATVIWNSLLSFY 99
++ N ++ +L + LG +H IK + VP I ++L + Y
Sbjct: 419 IIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLE------VP----IGSALSTMY 468
Query: 100 LKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASF 159
KC + + +F P +D VSWN M+SG NG+ D F+ L G + D +F
Sbjct: 469 SKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGM-EPDDVTF 527
Query: 160 TIILSAC 166
I+SAC
Sbjct: 528 VNIISAC 534
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 379 bits (974), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/565 (37%), Positives = 333/565 (58%), Gaps = 10/565 (1%)
Query: 91 IWNSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELG 150
I N L++ Y KC + +A ++F M +D+VSWN+M++G +NG F +K +
Sbjct: 351 IGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYK---SMR 407
Query: 151 FYQLDQASFTII--LSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSS 208
+ + SFT+I LS+C + + + + IH G + V+V NAL+T Y + G +
Sbjct: 408 RHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLN 467
Query: 209 SGRKVFGEMRVRNVITWTAVISGLVQNQL-YEEGLKLFVKMHLGLINPNSLTYLSSVMAC 267
RK+F M + ++W ++I L +++ E + F+ N +T+ S + A
Sbjct: 468 ECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAV 527
Query: 268 SGLQALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIF-EFAEELDGVSM 326
S L G+QIHG+ K + + E+AL+ Y KCG ++ +IF AE D V+
Sbjct: 528 SSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTW 587
Query: 327 TVILVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIK 386
++ G+ N +A+ L M++ G +D M + VL F +L G ++H+ ++
Sbjct: 588 NSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVR 647
Query: 387 SDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALEL 446
+ S+ V + L++MYSKCG L+ +++ F+ M RNS SWNSMI+ +ARHG G +AL+L
Sbjct: 648 ACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKL 707
Query: 447 YEEMKLEGVEPTD-VTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMV 505
+E MKL+G P D VTF+ +L ACSH GL+ +G + +SM++ + ++PR EH++C+ D++
Sbjct: 708 FETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVL 767
Query: 506 GRAGLLIEARSFIERMPVKPDVLVWQALLGACSIHG--DSEMGKYAAEKLFLAQPDSPAP 563
GRAG L + FIE+MP+KP+VL+W+ +LGAC +E+GK AAE LF +P++
Sbjct: 768 GRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVN 827
Query: 564 YILMANIYSCSGRWKERAKAIKRMKEMGVDKETGISWIEIEKQVHSFVVDDKMHPQADTI 623
Y+L+ N+Y+ GRW++ KA K+MK+ V KE G SW+ ++ VH FV DK HP AD I
Sbjct: 828 YVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVI 887
Query: 624 HGVLAELLRLMIDEGYVPNKRFILH 648
+ L EL R M D GYVP F L+
Sbjct: 888 YKKLKELNRKMRDAGYVPQTGFALY 912
Score = 199 bits (505), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 138/459 (30%), Positives = 231/459 (50%), Gaps = 23/459 (5%)
Query: 93 NSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFY 152
N+L++ YL+ +A K+FD+MP+R+ VSW +VSG+ RNGE F + ++ G +
Sbjct: 40 NNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIF 99
Query: 153 QLDQASFTIILSACDR--SELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKC-GSSSS 209
+Q +F +L AC S L + IH L++ Y + V N LI+ Y+KC GS
Sbjct: 100 S-NQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGY 158
Query: 210 GRKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSV-MACS 268
FG++ V+N ++W ++IS Q ++F M P T+ S V ACS
Sbjct: 159 ALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACS 218
Query: 269 GLQA---LCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVS 325
+ L E QI + K L +DL + S L+ ++K GS+ A ++F E + V+
Sbjct: 219 LTEPDVRLLE--QIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVT 276
Query: 326 MTVILVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVF-----GVDTSLGLGKQI 380
+ ++VG + + EEA +LF+ M + I++ P +L F + L G+++
Sbjct: 277 LNGLMVGLVRQKWGEEATKLFMDM-NSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREV 335
Query: 381 HSLIIKS---DFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARH 437
H +I + DF + NGL+NMY+KCG + D+ +VF M ++SVSWNSMI ++
Sbjct: 336 HGHVITTGLVDFMVG--IGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQN 393
Query: 438 GNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEH 497
G +A+E Y+ M+ + P T +S L +C+ + G + ++ I
Sbjct: 394 GCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLG-IDLNVSV 452
Query: 498 YACVVDMVGRAGLLIEARSFIERMPVKPDVLVWQALLGA 536
++ + G L E R MP + D + W +++GA
Sbjct: 453 SNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 176 bits (446), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 146/500 (29%), Positives = 242/500 (48%), Gaps = 28/500 (5%)
Query: 91 IWNSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELG 150
+ + L+S + K + A K+F+ M R+ V+ N ++ G +R + F +
Sbjct: 245 VGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM- 303
Query: 151 FYQLDQASFTIILSACDRSELSLVSKM-------IHCLVYLCGYEE-EVTVGNALITSYF 202
+ S+ I+LS+ E SL ++ +H V G + V +GN L+ Y
Sbjct: 304 -IDVSPESYVILLSSF--PEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYA 360
Query: 203 KCGSSSSGRKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLS 262
KCGS + R+VF M ++ ++W ++I+GL QN + E ++ + M I P S T +S
Sbjct: 361 KCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLIS 420
Query: 263 SVMACSGLQALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELD 322
S+ +C+ L+ G+QIHG KL + ++ + +ALM +Y++ G + + +IF E D
Sbjct: 421 SLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHD 480
Query: 323 GVSMTVILVGFAQNGFE-EEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIH 381
VS I+ A++ EA+ F+ +AG +++ S+VL + LGKQIH
Sbjct: 481 QVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIH 540
Query: 382 SLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAP-RNSVSWNSMIAAFARHGNG 440
L +K++ N LI Y KCG+++ K+FSRMA R++V+WNSMI+ + +
Sbjct: 541 GLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELL 600
Query: 441 FKALELYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRA--EHY 498
KAL+L M G + ++L A + V + +GM EVH S RA E
Sbjct: 601 AKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGM-------EVHACSVRACLESD 653
Query: 499 ACV----VDMVGRAGLLIEARSFIERMPVKPDVLVWQALLGACSIHGDSEMGKYAAEKLF 554
V VDM + G L A F MPV+ + W +++ + HG E E +
Sbjct: 654 VVVGSALVDMYSKCGRLDYALRFFNTMPVR-NSYSWNSMISGYARHGQGEEALKLFETMK 712
Query: 555 LAQPDSPAPYILMANIYSCS 574
L P + + +CS
Sbjct: 713 LDGQTPPDHVTFVGVLSACS 732
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 115/441 (26%), Positives = 208/441 (47%), Gaps = 21/441 (4%)
Query: 174 VSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVITWTAVISGLV 233
++ H +Y +++V + N LI +Y + G S S RKVF EM +RN ++W ++SG
Sbjct: 19 AARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYS 78
Query: 234 QNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACS--GLQALCEGRQIHGILWKLALQSD 291
+N ++E L M I N ++S + AC G + GRQIHG+++KL+ D
Sbjct: 79 RNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVD 138
Query: 292 LCIESALMDMYSKC-GSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLFVKMV 350
+ + L+ MY KC GSV A F E + VS I+ ++Q G + A ++F M
Sbjct: 139 AVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQ 198
Query: 351 KAGIEIDPNMVSAVLGVFG--VDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGD 408
G +++ + + L +QI I KS ++ FV +GL++ ++K G
Sbjct: 199 YDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGS 258
Query: 409 LEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHA 468
L + KVF++M RN+V+ N ++ R G +A +L+ +M ++ + +++ LL +
Sbjct: 259 LSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMN-SMIDVSPESYVILLSS 317
Query: 469 ------CSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEARSFIERMP 522
VGL KG E + + +V+M + G + +AR M
Sbjct: 318 FPEYSLAEEVGL-KKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMT 376
Query: 523 VKPDVLVWQALLGACSIHGD--SEMGKYAAEKLFLAQPDSPAPYILMANIYSCSG-RWKE 579
K D + W +++ +G + +Y K P + L++++ SC+ +W +
Sbjct: 377 DK-DSVSWNSMITGLDQNGCFIEAVERY---KSMRRHDILPGSFTLISSLSSCASLKWAK 432
Query: 580 RAKAIK-RMKEMGVDKETGIS 599
+ I ++G+D +S
Sbjct: 433 LGQQIHGESLKLGIDLNVSVS 453
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 105/218 (48%), Gaps = 15/218 (6%)
Query: 62 LGPSLHASFIKTFEPFDNQNVYNVPNATVIWNSLLSFYLKCDQMRNAVKLFDDMP-MRDT 120
LG +H +K N+ + N+L++ Y KC +M K+F M RD
Sbjct: 535 LGKQIHGLALKN----------NIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDN 584
Query: 121 VSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFTIILSA-CDRSELSLVSKMIH 179
V+WN+M+SG++ N L+ G +LD + +LSA + L ++
Sbjct: 585 VTWNSMISGYIHNELLAKALDLVWFMLQTG-QRLDSFMYATVLSAFASVATLERGMEVHA 643
Query: 180 CLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVITWTAVISGLVQNQLYE 239
C V C E +V VG+AL+ Y KCG + F M VRN +W ++ISG ++ E
Sbjct: 644 CSVRAC-LESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGE 702
Query: 240 EGLKLFVKMHL-GLINPNSLTYLSSVMACSGLQALCEG 276
E LKLF M L G P+ +T++ + ACS L EG
Sbjct: 703 EALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEG 740
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%)
Query: 375 GLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAF 434
G + HS + K+ + ++ N LIN Y + GD + KVF M RN VSW +++ +
Sbjct: 18 GAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGY 77
Query: 435 ARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHVGLV 475
+R+G +AL +M EG+ F+S+L AC +G V
Sbjct: 78 SRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 379 bits (973), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/607 (36%), Positives = 331/607 (54%), Gaps = 12/607 (1%)
Query: 43 NYVDISRLLSISAKEGHFHLGPSLHASFIKTFEPFDNQNVYNVPNATVIWNSLLSFYLKC 102
N V +LS+ A + LG LH + + F+ I NSLLS Y KC
Sbjct: 238 NAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGS----------IKNSLLSMYSKC 287
Query: 103 DQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFTII 162
+ +A KLF M DTV+WN M+SG++++G + FF + G D +F+ +
Sbjct: 288 GRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLP-DAITFSSL 346
Query: 163 LSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNV 222
L + + E K IHC + ++ + +ALI +YFKC S + +F + +V
Sbjct: 347 LPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDV 406
Query: 223 ITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGI 282
+ +TA+ISG + N LY + L++F + I+PN +T +S + L AL GR++HG
Sbjct: 407 VVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGF 466
Query: 283 LWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEA 342
+ K + I A++DMY+KCG + A++IFE + D VS ++ AQ+ A
Sbjct: 467 IIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAA 526
Query: 343 MQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINM 402
+ +F +M +GI D +SA L S GK IH +IK S+ + + LI+M
Sbjct: 527 IDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDM 586
Query: 403 YSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEM-KLEGVEPTDVT 461
Y+KCG+L+ ++ VF M +N VSWNS+IAA HG +L L+ EM + G+ P +T
Sbjct: 587 YAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQIT 646
Query: 462 FLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEARSFIERM 521
FL ++ +C HVG V++G+ F +SMTE + I P+ EHYACVVD+ GRAG L EA ++ M
Sbjct: 647 FLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSM 706
Query: 522 PVKPDVLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDSPAPYILMANIYSCSGRWKERA 581
P PD VW LLGAC +H + E+ + A+ KL P + Y+L++N ++ + W+
Sbjct: 707 PFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVT 766
Query: 582 KAIKRMKEMGVDKETGISWIEIEKQVHSFVVDDKMHPQADTIHGVLAELLRLMIDEGYVP 641
K MKE V K G SWIEI K+ H FV D HP++ I+ +L LL + EGY+P
Sbjct: 767 KVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYIP 826
Query: 642 NKRFILH 648
LH
Sbjct: 827 QPYLPLH 833
Score = 216 bits (549), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 132/453 (29%), Positives = 242/453 (53%), Gaps = 7/453 (1%)
Query: 91 IWNSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELG 150
+ +SL+ YL+ ++ KLFD + +D V WN M++G+ + G D F + +
Sbjct: 175 VASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFS-VMRMD 233
Query: 151 FYQLDQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSG 210
+ +F +LS C L + +H LV + G + E ++ N+L++ Y KCG
Sbjct: 234 QISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDA 293
Query: 211 RKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGL 270
K+F M + +TW +ISG VQ+ L EE L F +M + P+++T+ S + + S
Sbjct: 294 SKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKF 353
Query: 271 QALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVIL 330
+ L +QIH + + ++ D+ + SAL+D Y KC V A IF +D V T ++
Sbjct: 354 ENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMI 413
Query: 331 VGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVS--AVLGVFGVDTSLGLGKQIHSLIIKSD 388
G+ NG +++++F +VK ++I PN ++ ++L V G+ +L LG+++H IIK
Sbjct: 414 SGYLHNGLYIDSLEMFRWLVK--VKISPNEITLVSILPVIGILLALKLGRELHGFIIKKG 471
Query: 389 FTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYE 448
F + + +I+MY+KCG + + ++F R++ R+ VSWNSMI A+ N A++++
Sbjct: 472 FDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFR 531
Query: 449 EMKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRA 508
+M + G+ V+ + L AC+++ + G M + H ++ + ++DM +
Sbjct: 532 QMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYAKC 590
Query: 509 GLLIEARSFIERMPVKPDVLVWQALLGACSIHG 541
G L A + + M K +++ W +++ AC HG
Sbjct: 591 GNLKAAMNVFKTMKEK-NIVSWNSIIAACGNHG 622
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 216/450 (48%), Gaps = 13/450 (2%)
Query: 95 LLSFYLKCDQMRNAVKLFDDMPMRDTV--SWNTMVSGFLRNGEFDMGFGFFKRSLELGFY 152
+L Y C + K+F + +R + WN+++S F+RNG + F+ + L G
Sbjct: 76 ILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGV- 134
Query: 153 QLDQASFTIILSAC----DRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSS 208
D ++F ++ AC + + +S + L G + V ++LI +Y + G
Sbjct: 135 SPDVSTFPCLVKACVALKNFKGIDFLSDTVSSL----GMDCNEFVASSLIKAYLEYGKID 190
Query: 209 SGRKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACS 268
K+F + ++ + W +++G + + +K F M + I+PN++T+ + C+
Sbjct: 191 VPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCA 250
Query: 269 GLQALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTV 328
+ G Q+HG++ + + I+++L+ MYSKCG +DA ++F D V+
Sbjct: 251 SKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNC 310
Query: 329 ILVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSD 388
++ G+ Q+G EE++ F +M+ +G+ D S++L +L KQIH I++
Sbjct: 311 MISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHS 370
Query: 389 FTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYE 448
+ + F+ + LI+ Y KC + + +FS+ + V + +MI+ + +G +LE++
Sbjct: 371 ISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFR 430
Query: 449 EMKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRA 508
+ + P ++T +S+L + + G E L R V+DM +
Sbjct: 431 WLVKVKISPNEITLVSILPVIGILLALKLGRE-LHGFIIKKGFDNRCNIGCAVIDMYAKC 489
Query: 509 GLLIEARSFIERMPVKPDVLVWQALLGACS 538
G + A ER+ K D++ W +++ C+
Sbjct: 490 GRMNLAYEIFERLS-KRDIVSWNSMITRCA 518
Score = 72.8 bits (177), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 70/131 (53%), Gaps = 5/131 (3%)
Query: 355 EIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIK 414
E P +S +L L GKQ+H+ +I + + + + + ++ MY+ CG D K
Sbjct: 32 ETIPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGK 91
Query: 415 VFSRMAPRNSV--SWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHV 472
+F R+ R S WNS+I++F R+G +AL Y +M GV P TF L+ AC V
Sbjct: 92 MFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC--V 149
Query: 473 GLVN-KGMEFL 482
L N KG++FL
Sbjct: 150 ALKNFKGIDFL 160
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 379 bits (973), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/561 (37%), Positives = 323/561 (57%), Gaps = 9/561 (1%)
Query: 94 SLLSFYLKCDQ-MRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFY 152
SL+ ++K + NA K+FD M + V+W M++ ++ G FF + GF
Sbjct: 207 SLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGF- 265
Query: 153 QLDQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKC---GSSSS 209
+ D+ + + + SAC E + K +H G ++V +L+ Y KC GS
Sbjct: 266 ESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDD 323
Query: 210 GRKVFGEMRVRNVITWTAVISGLVQN-QLYEEGLKLFVKM-HLGLINPNSLTYLSSVMAC 267
RKVF M +V++WTA+I+G ++N L E + LF +M G + PN T+ S+ AC
Sbjct: 324 CRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKAC 383
Query: 268 SGLQALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMT 327
L G+Q+ G +K L S+ + ++++ M+ K +EDA + FE E + VS
Sbjct: 384 GNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYN 443
Query: 328 VILVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKS 387
L G +N E+A +L ++ + + + +++L S+ G+QIHS ++K
Sbjct: 444 TFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKL 503
Query: 388 DFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELY 447
+ N V N LI+MYSKCG ++ + +VF+ M RN +SW SMI FA+HG + LE +
Sbjct: 504 GLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETF 563
Query: 448 EEMKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGR 507
+M EGV+P +VT++++L ACSHVGLV++G SM E H+I P+ EHYAC+VD++ R
Sbjct: 564 NQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCR 623
Query: 508 AGLLIEARSFIERMPVKPDVLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDSPAPYILM 567
AGLL +A FI MP + DVLVW+ LGAC +H ++E+GK AA K+ P+ PA YI +
Sbjct: 624 AGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQL 683
Query: 568 ANIYSCSGRWKERAKAIKRMKEMGVDKETGISWIEIEKQVHSFVVDDKMHPQADTIHGVL 627
+NIY+C+G+W+E + ++MKE + KE G SWIE+ ++H F V D HP A I+ L
Sbjct: 684 SNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDEL 743
Query: 628 AELLRLMIDEGYVPNKRFILH 648
L+ + GYVP+ +LH
Sbjct: 744 DRLITEIKRCGYVPDTDLVLH 764
Score = 182 bits (463), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 143/510 (28%), Positives = 246/510 (48%), Gaps = 31/510 (6%)
Query: 45 VDISRLLSISAKEGHFHLGPSLHASFIKTFEPFDNQNVYNVPNATVIWNSLLSFYLKCDQ 104
V S LL + F LG +HA I+ +++ +V++NSL+S Y K
Sbjct: 63 VTFSSLLKSCIRARDFRLGKLVHARLIE----------FDIEPDSVLYNSLISLYSKSGD 112
Query: 105 MRNAVKLFDDMPM---RDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFTI 161
A +F+ M RD VSW+ M++ + NG F LELG D +T
Sbjct: 113 SAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYC-YTA 171
Query: 162 ILSACDRSELSLVSKMIHCLVYLCG-YEEEVTVGNALITSYFKCGSS-SSGRKVFGEMRV 219
++ AC S+ V ++ + G +E +V VG +LI + K +S + KVF +M
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231
Query: 220 RNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQI 279
NV+TWT +I+ +Q E ++ F+ M L + T S AC+ L+ L G+Q+
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291
Query: 280 HGILWKLALQSDLCIESALMDMYSKC---GSVEDAWQIFEFAEELDGVSMTVILVGFAQN 336
H + L D +E +L+DMY+KC GSV+D ++F+ E+ +S T ++ G+ +N
Sbjct: 292 HSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKN 349
Query: 337 -GFEEEAMQLFVKMVKAGIEIDPN--MVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNP 393
EA+ LF +M+ G ++PN S+ G + +GKQ+ K SN
Sbjct: 350 CNLATEAINLFSEMITQG-HVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNS 408
Query: 394 FVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLE 453
V N +I+M+ K +ED+ + F ++ +N VS+N+ + R+ N +A +L E+
Sbjct: 409 SVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITER 468
Query: 454 GVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYAC--VVDMVGRAGLL 511
+ + TF SLL ++VG + KG + ++V ++ C ++ M + G +
Sbjct: 469 ELGVSAFTFASLLSGVANVGSIRKGEQI---HSQVVKLGLSCNQPVCNALISMYSKCGSI 525
Query: 512 IEARSFIERMPVKPDVLVWQALLGACSIHG 541
A M + +V+ W +++ + HG
Sbjct: 526 DTASRVFNFMENR-NVISWTSMITGFAKHG 554
Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 111/344 (32%), Positives = 187/344 (54%), Gaps = 14/344 (4%)
Query: 150 GFYQLDQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSS 209
G +D +F+ +L +C R+ + K++H + E + + N+LI+ Y K G S+
Sbjct: 56 GIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAK 115
Query: 210 GRKVFGEMR---VRNVITWTAVISGLVQNQLYEEGLKLFVK-MHLGLINPNSLTYLSSVM 265
VF MR R+V++W+A+++ N + +K+FV+ + LGL+ PN Y + +
Sbjct: 116 AEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLV-PNDYCYTAVIR 174
Query: 266 ACSGLQALCEGRQIHGILWKLA-LQSDLCIESALMDMYSKC-GSVEDAWQIFEFAEELDG 323
ACS + GR G L K +SD+C+ +L+DM+ K S E+A+++F+ EL+
Sbjct: 175 ACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNV 234
Query: 324 VSMTVILVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSL 383
V+ T+++ Q GF EA++ F+ MV +G E D +S+V +L LGKQ+HS
Sbjct: 235 VTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSW 294
Query: 384 IIKSDFTSNPFVNNGLINMYSKC---GDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGN- 439
I+S + V L++MY+KC G ++D KVF RM + +SW ++I + ++ N
Sbjct: 295 AIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNL 352
Query: 440 GFKALELYEEMKLEG-VEPTDVTFLSLLHACSHVGLVNKGMEFL 482
+A+ L+ EM +G VEP TF S AC ++ G + L
Sbjct: 353 ATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVL 396
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 153/338 (45%), Gaps = 41/338 (12%)
Query: 91 IWNSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELG 150
+ NS++S ++K D+M +A + F+ + ++ VS+NT + G RN F+ F E+
Sbjct: 410 VANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLS---EIT 466
Query: 151 FYQLDQASFTI--ILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSS 208
+L ++FT +LS + IH V G V NALI+ Y KCGS
Sbjct: 467 ERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSID 526
Query: 209 SGRKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACS 268
+ +VF M RNVI+WT++I+G ++ L+ F +M + PN +TY++ + ACS
Sbjct: 527 TASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACS 586
Query: 269 GLQALCEG-RQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMT 327
+ + EG R + + ++ + + ++D+ + G + DA FEF + +
Sbjct: 587 HVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDA---FEFINTMPFQADV 643
Query: 328 VILVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKS 387
++ F LG V ++ LGK I++
Sbjct: 644 LVWRTF-------------------------------LGACRVHSNTELGKLAARKILEL 672
Query: 388 DFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSV 425
D + P L N+Y+ G E+S ++ +M RN V
Sbjct: 673 D-PNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLV 709
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 13/127 (10%)
Query: 50 LLSISAKEGHFHLGPSLHASFIKTFEPFDNQNVYNVPNATVIWNSLLSFYLKCDQMRNAV 109
LLS A G G +H+ +K + + N+L+S Y KC + A
Sbjct: 480 LLSGVANVGSIRKGEQIHSQVVK----------LGLSCNQPVCNALISMYSKCGSIDTAS 529
Query: 110 KLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFTIILSACDRS 169
++F+ M R+ +SW +M++GF ++G F + +E G + ++ ++ ILSAC S
Sbjct: 530 RVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGV-KPNEVTYVAILSAC--S 586
Query: 170 ELSLVSK 176
+ LVS+
Sbjct: 587 HVGLVSE 593
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 379 bits (972), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/586 (34%), Positives = 330/586 (56%), Gaps = 40/586 (6%)
Query: 90 VIWNSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLEL 149
V WN ++ Y++ + A +LF+ MP RD SWNTM+SG+ +NG D F R E
Sbjct: 127 VSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK 186
Query: 150 GFYQLDQASFTIILSA----------C----DRSELSLVS------------KMIHCLVY 183
+ S+ +LSA C R +LVS K++ +
Sbjct: 187 -----NDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQF 241
Query: 184 LCGYE-EEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVITWTAVISGLVQNQLYEEGL 242
+V N +IT Y + G R++F E V++V TWTA++SG +QN++ EE
Sbjct: 242 FDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEAR 301
Query: 243 KLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGILWKLALQSDLCIESALMDMY 302
+LF KM P + M +Q E ++ L+ + ++ + ++ Y
Sbjct: 302 ELFDKM------PERNEVSWNAMLAGYVQG--ERMEMAKELFDVMPCRNVSTWNTMITGY 353
Query: 303 SKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVS 362
++CG + +A +F+ + D VS ++ G++Q+G EA++LFV+M + G ++ + S
Sbjct: 354 AQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFS 413
Query: 363 AVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPR 422
+ L +L LGKQ+H ++K + + FV N L+ MY KCG +E++ +F MA +
Sbjct: 414 SALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK 473
Query: 423 NSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFL 482
+ VSWN+MIA ++RHG G AL +E MK EG++P D T +++L ACSH GLV+KG ++
Sbjct: 474 DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYF 533
Query: 483 KSMTEVHRISPRAEHYACVVDMVGRAGLLIEARSFIERMPVKPDVLVWQALLGACSIHGD 542
+MT+ + + P ++HYAC+VD++GRAGLL +A + ++ MP +PD +W LLGA +HG+
Sbjct: 534 YTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGN 593
Query: 543 SEMGKYAAEKLFLAQPDSPAPYILMANIYSCSGRWKERAKAIKRMKEMGVDKETGISWIE 602
+E+ + AA+K+F +P++ Y+L++N+Y+ SGRW + K RM++ GV K G SWIE
Sbjct: 594 TELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIE 653
Query: 603 IEKQVHSFVVDDKMHPQADTIHGVLAELLRLMIDEGYVPNKRFILH 648
I+ + H+F V D+ HP+ D I L EL M GYV +LH
Sbjct: 654 IQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLH 699
Score = 152 bits (385), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 120/463 (25%), Positives = 218/463 (47%), Gaps = 43/463 (9%)
Query: 92 WNSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGF 151
WN +S Y++ + A+++F MP +VS+N M+SG+LRNGEF++ F E
Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPE--- 123
Query: 152 YQLDQASFTIILSACDRSE-LSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSG 210
D S+ +++ R+ L ++ + E +V N +++ Y + G
Sbjct: 124 --RDLVSWNVMIKGYVRNRNLGKARELFEIMP-----ERDVCSWNTMLSGYAQNGCVDDA 176
Query: 211 RKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLF-VKMHLGLINPNSLTYLSSVMACSG 269
R VF M +N ++W A++S VQN EE LF + + L++ N L +
Sbjct: 177 RSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCL-----LGGFVK 231
Query: 270 LQALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVI 329
+ + E RQ + D+ + ++ Y++ G +++A Q+F+ + D + T +
Sbjct: 232 KKKIVEARQFFDSM----NVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAM 287
Query: 330 LVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDF 389
+ G+ QN EEA +LF KM + E+ N A+L + + + K++ ++
Sbjct: 288 VSGYIQNRMVEEARELFDKMPERN-EVSWN---AMLAGYVQGERMEMAKELFDVMP---- 339
Query: 390 TSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEE 449
N N +I Y++CG + ++ +F +M R+ VSW +MIA +++ G+ F+AL L+ +
Sbjct: 340 CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQ 399
Query: 450 MKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVH-RISPRAEHYACVVD----- 503
M+ EG +F S L C+ V + G ++H R+ C V
Sbjct: 400 MEREGGRLNRSSFSSALSTCADVVALELG-------KQLHGRLVKGGYETGCFVGNALLL 452
Query: 504 MVGRAGLLIEARSFIERMPVKPDVLVWQALLGACSIHGDSEMG 546
M + G + EA + M K D++ W ++ S HG E+
Sbjct: 453 MYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAGYSRHGFGEVA 494
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 177/375 (47%), Gaps = 39/375 (10%)
Query: 185 CGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKL 244
CG + ++ N I+SY + G + +VF M + +++ +ISG ++N +E KL
Sbjct: 59 CG-DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKL 117
Query: 245 FVKM-HLGLINPNSLT--YLSSVMACSGLQALCEGRQIHGILWKLALQSDLCIESALMDM 301
F +M L++ N + Y+ + + L + R+ L+++ + D+C + ++
Sbjct: 118 FDEMPERDLVSWNVMIKGYVRN-------RNLGKARE----LFEIMPERDVCSWNTMLSG 166
Query: 302 YSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMV 361
Y++ G V+DA +F+ E + VS +L + QN EEA LF + + N
Sbjct: 167 YAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL-VSWN-- 223
Query: 362 SAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAP 421
+LG F + +Q + D S N +I Y++ G ++++ ++F
Sbjct: 224 -CLLGGFVKKKKIVEARQFFDSMNVRDVVS----WNTIITGYAQSGKIDEARQLFDESPV 278
Query: 422 RNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHVGLVN-KGME 480
++ +W +M++ + ++ +A EL+++M E +V++ ++L G V + ME
Sbjct: 279 QDVFTWTAMVSGYIQNRMVEEARELFDKMP----ERNEVSWNAML-----AGYVQGERME 329
Query: 481 FLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEARSFIERMPVKPDVLVWQALLGACSIH 540
K + +V + ++ + G + EA++ ++MP K D + W A++ S
Sbjct: 330 MAKELFDVMPCR-NVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAGYSQS 387
Query: 541 GDSEMGKYAAEKLFL 555
G S + A +LF+
Sbjct: 388 GHS----FEALRLFV 398
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 377 bits (968), Expect = e-103, Method: Compositional matrix adjust.
Identities = 233/716 (32%), Positives = 369/716 (51%), Gaps = 89/716 (12%)
Query: 6 VFLKLNSNFPFCSSLVSPFITKIIQDPTSS-------TSKLVLDNYVDISRLLSISAKEG 58
V L L++ C++L+ + K T+ S L+ Y+ ++ L+++ +K G
Sbjct: 5 VPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYL-MNNLMNVYSKTG 63
Query: 59 HFHLGPSLHASFIKTFEPFDNQNVYNVPNATVIWNSLLSFYLKCDQMRNAVKLFDDMPMR 118
+ +LHA K F+ + ++ WN++LS Y K M + + FD +P R
Sbjct: 64 Y-----ALHAR--KLFDEMPLRTAFS-------WNTVLSAYSKRGDMDSTCEFFDQLPQR 109
Query: 119 DTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFTIILSACDRSELSLVSKMI 178
D+VSW TM+ G+ G++ ++ G + Q + T +L++ + K +
Sbjct: 110 DSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGI-EPTQFTLTNVLASVAATRCMETGKKV 168
Query: 179 HCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNV---------------- 222
H + G V+V N+L+ Y KCG + VF M VR++
Sbjct: 169 HSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQM 228
Query: 223 ---------------ITWTAVISGLVQNQLYEEGLKLFVKM-HLGLINPNSLTYLSSVMA 266
+TW ++ISG Q L +F KM L++P+ T S + A
Sbjct: 229 DLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSA 288
Query: 267 CSGLQALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFE---------- 316
C+ L+ LC G+QIH + + +AL+ MYS+CG VE A ++ E
Sbjct: 289 CANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIE 348
Query: 317 -FAEELDG----------------------VSMTVILVGFAQNGFEEEAMQLFVKMVKAG 353
F LDG V+ T ++VG+ Q+G EA+ LF MV G
Sbjct: 349 GFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGG 408
Query: 354 IEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSI 413
+ ++A+L V SL GKQIH +KS + V+N LI MY+K G++ +
Sbjct: 409 QRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSAS 468
Query: 414 KVFSRM-APRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHV 472
+ F + R++VSW SMI A A+HG+ +ALEL+E M +EG+ P +T++ + AC+H
Sbjct: 469 RAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHA 528
Query: 473 GLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEARSFIERMPVKPDVLVWQA 532
GLVN+G ++ M +V +I P HYAC+VD+ GRAGLL EA+ FIE+MP++PDV+ W +
Sbjct: 529 GLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGS 588
Query: 533 LLGACSIHGDSEMGKYAAEKLFLAQPDSPAPYILMANIYSCSGRWKERAKAIKRMKEMGV 592
LL AC +H + ++GK AAE+L L +P++ Y +AN+YS G+W+E AK K MK+ V
Sbjct: 589 LLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRV 648
Query: 593 DKETGISWIEIEKQVHSFVVDDKMHPQADTIHGVLAELLRLMIDEGYVPNKRFILH 648
KE G SWIE++ +VH F V+D HP+ + I+ + ++ + GYVP+ +LH
Sbjct: 649 KKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLH 704
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 374 bits (959), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/606 (34%), Positives = 333/606 (54%), Gaps = 50/606 (8%)
Query: 72 KTFEPFDNQNVYNVPNATVIWNSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFL 131
+ F+ +N+Y WNS+++ K + A LF MP RD +WN+MVSGF
Sbjct: 76 QVFDKMPQRNIYT-------WNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFA 128
Query: 132 RNGEFDMGFGFFKRSLELGFYQLDQASFTIILSACDRSELSLVSK--MIHCLVYLCGYEE 189
++ + +F + GF L++ SF +LSAC S L+ ++K +H L+ +
Sbjct: 129 QHDRCEEALCYFAMMHKEGFV-LNEYSFASVLSAC--SGLNDMNKGVQVHSLIAKSPFLS 185
Query: 190 EVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMH 249
+V +G+AL+ Y KCG+ + ++VF EM RNV++W ++I+ QN E L +F M
Sbjct: 186 DVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMML 245
Query: 250 LGLINPNSLTYLSSVMACSGLQALCEGRQIHG-ILWKLALQSDLCIESALMDMYSKCGSV 308
+ P+ +T S + AC+ L A+ G+++HG ++ L++D+ + +A +DMY+KC +
Sbjct: 246 ESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRI 305
Query: 309 EDAWQIFE-------FAE------------------------ELDGVSMTVILVGFAQNG 337
++A IF+ AE E + VS ++ G+ QNG
Sbjct: 306 KEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNG 365
Query: 338 FEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFT------S 391
EEA+ LF + + + + +L L LG Q H ++K F
Sbjct: 366 ENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEED 425
Query: 392 NPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMK 451
+ FV N LI+MY KCG +E+ VF +M R+ VSWN+MI FA++G G +ALEL+ EM
Sbjct: 426 DIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREML 485
Query: 452 LEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGLL 511
G +P +T + +L AC H G V +G + SMT ++P +HY C+VD++GRAG L
Sbjct: 486 ESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFL 545
Query: 512 IEARSFIERMPVKPDVLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDSPAPYILMANIY 571
EA+S IE MP++PD ++W +LL AC +H + +GKY AEKL +P + PY+L++N+Y
Sbjct: 546 EEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMY 605
Query: 572 SCSGRWKERAKAIKRMKEMGVDKETGISWIEIEKQVHSFVVDDKMHPQADTIHGVLAELL 631
+ G+W++ K M++ GV K+ G SWI+I+ H F+V DK HP+ IH +L L+
Sbjct: 606 AELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILI 665
Query: 632 RLMIDE 637
M E
Sbjct: 666 AEMRPE 671
Score = 192 bits (488), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 120/403 (29%), Positives = 207/403 (51%), Gaps = 65/403 (16%)
Query: 142 FFKRSLELGFYQLDQASFTIILSACDRSELSLVS-KMIHCLVYLCGYEEEVTVGNALITS 200
F K + +L + D + F +L +C +S+LS + + +H V G+ E+ + N LI +
Sbjct: 6 FLKLAADLSSFT-DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDA 64
Query: 201 YFKCGSSSSGRKVFGEMRVRNVITWTAVISGLV--------------------------- 233
Y KCGS GR+VF +M RN+ TW +V++GL
Sbjct: 65 YSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMV 124
Query: 234 ----QNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGILWKLALQ 289
Q+ EE L F MH N ++ S + ACSGL + +G Q+H ++ K
Sbjct: 125 SGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFL 184
Query: 290 SDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLFVKM 349
SD+ I SAL+DMYSKCG+V DA ++F+ + + VS ++ F QNG EA+ +F M
Sbjct: 185 SDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMM 244
Query: 350 VKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFV-NNGLINMYSKCGD 408
+++ +E D +++V+ +++ +G+++H ++K+D N + +N ++MY+KC
Sbjct: 245 LESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSR 304
Query: 409 LE------DSIKV-------------------------FSRMAPRNSVSWNSMIAAFARH 437
++ DS+ + F++MA RN VSWN++IA + ++
Sbjct: 305 IKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQN 364
Query: 438 GNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGME 480
G +AL L+ +K E V PT +F ++L AC+ + ++ GM+
Sbjct: 365 GENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQ 407
Score = 142 bits (358), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 141/279 (50%), Gaps = 31/279 (11%)
Query: 277 RQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFE-------------------- 316
R +H + K +++ I++ L+D YSKCGS+ED Q+F+
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 317 -FAEELDGV----------SMTVILVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVL 365
F +E D + + ++ GFAQ+ EEA+ F M K G ++ ++VL
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 366 GVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSV 425
+ G Q+HSLI KS F S+ ++ + L++MYSKCG++ D+ +VF M RN V
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 426 SWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSM 485
SWNS+I F ++G +AL++++ M VEP +VT S++ AC+ + + G E +
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279
Query: 486 TEVHRISPRAEHYACVVDMVGRAGLLIEARSFIERMPVK 524
+ ++ VDM + + EAR + MP++
Sbjct: 280 VKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318
Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 45/194 (23%)
Query: 378 KQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRN-------------- 423
+ +H+ +IKS F++ F+ N LI+ YSKCG LED +VF +M RN
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 424 -----------------SVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLL 466
+WNSM++ FA+H +AL + M EG + +F S+L
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 467 HACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACV------VDMVGRAGLLIEARSFIER 520
ACS + +NKG+ +VH + ++ + V VDM + G + +A+ +
Sbjct: 160 SACSGLNDMNKGV-------QVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDE 212
Query: 521 MPVKPDVLVWQALL 534
M + +V+ W +L+
Sbjct: 213 MGDR-NVVSWNSLI 225
>sp|Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containing protein At3g25970
OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2
Length = 701
Score = 369 bits (947), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/599 (35%), Positives = 340/599 (56%), Gaps = 17/599 (2%)
Query: 41 LDNYVDISRLLSISAKEGHFHLGPSLHASFIKT-FEPFDNQNVYNVPNATVIWNSLLSFY 99
+D Y SRLL A F LG +H IK +E NVY + +SL+ Y
Sbjct: 99 VDGY-SFSRLLKGIASVKRFDLGEQVHGLVIKGGYEC----NVY-------VGSSLVDMY 146
Query: 100 LKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASF 159
KC+++ +A + F ++ ++VSWN +++GF++ + F +D +F
Sbjct: 147 AKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTF 206
Query: 160 TIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVF-GEMR 218
+L+ D + K +H V G + E+T+ NA+I+SY CGS S ++VF G
Sbjct: 207 APLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGG 266
Query: 219 VRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQ 278
+++I+W ++I+G +++L E +LF++M + + TY + ACSG + G+
Sbjct: 267 SKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKS 326
Query: 279 IHGILWKLALQSDLCIESALMDMYSK--CGSVEDAWQIFEFAEELDGVSMTVILVGFAQN 336
+HG++ K L+ +AL+ MY + G++EDA +FE + D +S I+ GFAQ
Sbjct: 327 LHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQK 386
Query: 337 GFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVN 396
G E+A++ F + + I++D SA+L +L LG+QIH+L KS F SN FV
Sbjct: 387 GLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVI 446
Query: 397 NGLINMYSKCGDLEDSIKVFSRMAPRNS-VSWNSMIAAFARHGNGFKALELYEEMKLEGV 455
+ LI MYSKCG +E + K F +++ ++S V+WN+MI +A+HG G +L+L+ +M + V
Sbjct: 447 SSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNV 506
Query: 456 EPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEAR 515
+ VTF ++L ACSH GL+ +G+E L M V++I PR EHYA VD++GRAGL+ +A+
Sbjct: 507 KLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAK 566
Query: 516 SFIERMPVKPDVLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDSPAPYILMANIYSCSG 575
IE MP+ PD +V + LG C G+ EM A L +P+ Y+ ++++YS
Sbjct: 567 ELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLK 626
Query: 576 RWKERAKAIKRMKEMGVDKETGISWIEIEKQVHSFVVDDKMHPQADTIHGVLAELLRLM 634
+W+E+A K MKE GV K G SWIEI QV +F +D+ +P I+ ++ +L + M
Sbjct: 627 KWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEM 685
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 132/463 (28%), Positives = 230/463 (49%), Gaps = 26/463 (5%)
Query: 93 NSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFF---KRSLEL 149
N +L Y+K + A LFD+MP RD+VSWNTM+SG+ G+ + + F KRS
Sbjct: 39 NRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGS- 97
Query: 150 GFYQLDQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSS 209
+D SF+ +L + + + +H LV GYE V VG++L+ Y KC
Sbjct: 98 ---DVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVED 154
Query: 210 GRKVFGEMRVRNVITWTAVISGLVQNQLYEEG--------LKLFVKMHLGLINPNSLTYL 261
+ F E+ N ++W A+I+G VQ + + +K V M G P LT L
Sbjct: 155 AFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAP-LLTLL 213
Query: 262 SSVMACSGLQALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFE-FAEE 320
M C+ L +Q+H + KL LQ ++ I +A++ Y+ CGSV DA ++F+
Sbjct: 214 DDPMFCNLL------KQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGS 267
Query: 321 LDGVSMTVILVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQI 380
D +S ++ GF+++ +E A +LF++M + +E D + +L + GK +
Sbjct: 268 KDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSL 327
Query: 381 HSLIIKSDFTSNPFVNNGLINMYSK--CGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHG 438
H ++IK N LI+MY + G +ED++ +F + ++ +SWNS+I FA+ G
Sbjct: 328 HGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKG 387
Query: 439 NGFKALELYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHY 498
A++ + ++ ++ D F +LL +CS + + G + T+ +S
Sbjct: 388 LSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVIS 447
Query: 499 ACVVDMVGRAGLLIEARSFIERMPVKPDVLVWQALLGACSIHG 541
+ +V M + G++ AR +++ K + W A++ + HG
Sbjct: 448 SLIV-MYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHG 489
Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 127/258 (49%), Gaps = 14/258 (5%)
Query: 290 SDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLFVKM 349
SD+ + + ++D Y K G + A +F+ + D VS ++ G+ G E+A LF M
Sbjct: 33 SDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCM 92
Query: 350 VKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDL 409
++G ++D S +L LG+Q+H L+IK + N +V + L++MY+KC +
Sbjct: 93 KRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERV 152
Query: 410 EDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDV-TFLSLLHA 468
ED+ + F ++ NSVSWN++IA F + + A L M+++ D TF LL
Sbjct: 153 EDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLL-- 210
Query: 469 CSHVGLVNKGMEFLKSMTEVH----RISPRAEHYAC--VVDMVGRAGLLIEARSFIERMP 522
L++ M F + +VH ++ + E C ++ G + +A+ + +
Sbjct: 211 ----TLLDDPM-FCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLG 265
Query: 523 VKPDVLVWQALLGACSIH 540
D++ W +++ S H
Sbjct: 266 GSKDLISWNSMIAGFSKH 283
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 369 bits (947), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/504 (37%), Positives = 298/504 (59%), Gaps = 7/504 (1%)
Query: 147 LELGFYQLDQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGS 206
LE + D+ + +L C +L + +++H + + ++ +GN L+ Y KCGS
Sbjct: 51 LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110
Query: 207 SSSGRKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMA 266
RKVF +M R+ +TWT +ISG Q+ + L F +M +PN T S + A
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170
Query: 267 CSGLQALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSM 326
+ + C G Q+HG K S++ + SAL+D+Y++ G ++DA +F+ E + VS
Sbjct: 171 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSW 230
Query: 327 TVILVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGL---GKQIHSL 383
++ G A+ E+A++LF M++ G P+ S +FG +S G GK +H+
Sbjct: 231 NALIAGHARRSGTEKALELFQGMLRDGFR--PSHFSYA-SLFGACSSTGFLEQGKWVHAY 287
Query: 384 IIKSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKA 443
+IKS F N L++MY+K G + D+ K+F R+A R+ VSWNS++ A+A+HG G +A
Sbjct: 288 MIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEA 347
Query: 444 LELYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVD 503
+ +EEM+ G+ P +++FLS+L ACSH GL+++G + + M + I P A HY VVD
Sbjct: 348 VWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKK-DGIVPEAWHYVTVVD 406
Query: 504 MVGRAGLLIEARSFIERMPVKPDVLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDSPAP 563
++GRAG L A FIE MP++P +W+ALL AC +H ++E+G YAAE +F PD P P
Sbjct: 407 LLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGP 466
Query: 564 YILMANIYSCSGRWKERAKAIKRMKEMGVDKETGISWIEIEKQVHSFVVDDKMHPQADTI 623
++++ NIY+ GRW + A+ K+MKE GV KE SW+EIE +H FV +D+ HPQ + I
Sbjct: 467 HVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEI 526
Query: 624 HGVLAELLRLMIDEGYVPNKRFIL 647
E+L + + GYVP+ ++
Sbjct: 527 ARKWEEVLAKIKELGYVPDTSHVI 550
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 191/405 (47%), Gaps = 15/405 (3%)
Query: 90 VIWNSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLEL 149
V+ N+LL+ Y KC + A K+F+ MP RD V+W T++SG+ ++ FF + L
Sbjct: 96 VMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRF 155
Query: 150 GFYQLDQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSS 209
G Y ++ + + ++ A +H CG++ V VG+AL+ Y + G
Sbjct: 156 G-YSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDD 214
Query: 210 GRKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSG 269
+ VF + RN ++W A+I+G + E+ L+LF M P+ +Y S ACS
Sbjct: 215 AQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSS 274
Query: 270 LQALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVI 329
L +G+ +H + K + + L+DMY+K GS+ DA +IF+ + D VS +
Sbjct: 275 TGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSL 334
Query: 330 LVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVS--AVLGVFGVDTSLGLGKQIHSLIIKS 387
L +AQ+GF +EA+ F +M + GI PN +S +VL L G + L+ K
Sbjct: 335 LTAYAQHGFGKEAVWWFEEMRRVGIR--PNEISFLSVLTACSHSGLLDEGWHYYELMKKD 392
Query: 388 DFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVS-WNSMIAAFARHGN----GFK 442
+ ++++ + GDL +++ M + + W +++ A H N +
Sbjct: 393 GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYA 452
Query: 443 ALELYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTE 487
A ++E L+ +P L ++A G N K M E
Sbjct: 453 AEHVFE---LDPDDPGPHVILYNIYASG--GRWNDAARVRKKMKE 492
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 367 bits (941), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/608 (33%), Positives = 324/608 (53%), Gaps = 16/608 (2%)
Query: 46 DISRLLSISAKEGHFHLGPSLHASFIKTFEPFDNQNVYNVPNATVIWNSLLSFYLKCDQM 105
++ +L + ++G G +H +K+ + + N L+ Y KC +
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLN----------LITSNYLIDMYCKCREP 57
Query: 106 RNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFTIILSA 165
A K+FD MP R+ VSW+ ++SG + NG+ F G Y ++ +F+ L A
Sbjct: 58 LMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYP-NEFTFSTNLKA 116
Query: 166 CDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVITW 225
C IH G+E V VGN+L+ Y KCG + KVF + R++I+W
Sbjct: 117 CGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISW 176
Query: 226 TAVISGLVQNQLYEEGLKLFVKMHLGLIN--PNSLTYLSSVMACSGLQALCEGRQIHGIL 283
A+I+G V + L F M I P+ T S + ACS + G+QIHG L
Sbjct: 177 NAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFL 236
Query: 284 WKLALQ--SDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEE 341
+ S I +L+D+Y KCG + A + F+ +E +S + +++G+AQ G E
Sbjct: 237 VRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVE 296
Query: 342 AMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLIN 401
AM LF ++ + +ID +S+++GVF L GKQ+ +L +K V N +++
Sbjct: 297 AMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVD 356
Query: 402 MYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVT 461
MY KCG ++++ K F+ M ++ +SW +I + +HG G K++ ++ EM +EP +V
Sbjct: 357 MYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVC 416
Query: 462 FLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEARSFIERM 521
+L++L ACSH G++ +G E + E H I PR EHYACVVD++GRAG L EA+ I+ M
Sbjct: 417 YLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTM 476
Query: 522 PVKPDVLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDSPAPYILMANIYSCSGRWKERA 581
P+KP+V +WQ LL C +HGD E+GK + L +PA Y++M+N+Y +G W E+
Sbjct: 477 PIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQG 536
Query: 582 KAIKRMKEMGVDKETGISWIEIEKQVHSFVVDDKMHPQADTIHGVLAELLRLMIDE-GYV 640
A + G+ KE G+SW+EIE++VH F + HP I L E R + +E GYV
Sbjct: 537 NARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYV 596
Query: 641 PNKRFILH 648
+ LH
Sbjct: 597 YGLKHELH 604
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 154/314 (49%), Gaps = 7/314 (2%)
Query: 255 PNSLTYLSSVMACSGLQALC-EGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQ 313
PN L S++ + L +G Q+H L K +L + L+DMY KC A++
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 314 IFEFAEELDGVSMTVILVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTS 373
+F+ E + VS + ++ G NG + ++ LF +M + GI + S L G+ +
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNA 122
Query: 374 LGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAA 433
L G QIH +K F V N L++MYSKCG + ++ KVF R+ R+ +SWN+MIA
Sbjct: 123 LEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAG 182
Query: 434 FARHGNGFKALELYEEMKLEGVE--PTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRI 491
F G G KAL+ + M+ ++ P + T SLL ACS G++ G + +
Sbjct: 183 FVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFH 242
Query: 492 SP-RAEHYACVVDMVGRAGLLIEARSFIERMPVKPDVLVWQALLGACSIHGD--SEMGKY 548
P A +VD+ + G L AR +++ K ++ W +L+ + G+ MG +
Sbjct: 243 CPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKT-MISWSSLILGYAQEGEFVEAMGLF 301
Query: 549 AAEKLFLAQPDSPA 562
+ +Q DS A
Sbjct: 302 KRLQELNSQIDSFA 315
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 363 bits (931), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 201/605 (33%), Positives = 326/605 (53%), Gaps = 47/605 (7%)
Query: 91 IWNSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELG 150
+ N+L++ Y +C + +A K+FD+M + D VSWN+++ + + G+ + F R
Sbjct: 164 VGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEF 223
Query: 151 FYQLDQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSG 210
+ D + +L C + K +HC + + VGN L+ Y KCG
Sbjct: 224 GCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEA 283
Query: 211 RKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMH--------------------- 249
VF M V++V++W A+++G Q +E+ ++LF KM
Sbjct: 284 NTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQR 343
Query: 250 ------LGL--------INPNSLTYLSSVMACSGLQALCEGRQIH--GILWKLALQS--- 290
LG+ I PN +T +S + C+ + AL G++IH I + + L+
Sbjct: 344 GLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGH 403
Query: 291 --DLCIESALMDMYSKCGSVEDAWQIFEF--AEELDGVSMTVILVGFAQNGFEEEAMQLF 346
+ + + L+DMY+KC V+ A +F+ +E D V+ TV++ G++Q+G +A++L
Sbjct: 404 GDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELL 463
Query: 347 VKMVKAGIEIDPN--MVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNP-FVNNGLINMY 403
+M + + PN +S L +L +GKQIH+ +++ + P FV+N LI+MY
Sbjct: 464 SEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMY 523
Query: 404 SKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFL 463
+KCG + D+ VF M +N V+W S++ + HG G +AL +++EM+ G + VT L
Sbjct: 524 AKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLL 583
Query: 464 SLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEARSFIERMPV 523
+L+ACSH G++++GME+ M V +SP EHYAC+VD++GRAG L A IE MP+
Sbjct: 584 VVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPM 643
Query: 524 KPDVLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDSPAPYILMANIYSCSGRWKERAKA 583
+P +VW A L C IHG E+G+YAAEK+ + Y L++N+Y+ +GRWK+ +
Sbjct: 644 EPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRI 703
Query: 584 IKRMKEMGVDKETGISWIEIEKQVHSFVVDDKMHPQADTIHGVLAELLRLMIDEGYVPNK 643
M+ GV K G SW+E K +F V DK HP A I+ VL + ++ + D GYVP
Sbjct: 704 RSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPET 763
Query: 644 RFILH 648
F LH
Sbjct: 764 GFALH 768
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 136/507 (26%), Positives = 231/507 (45%), Gaps = 67/507 (13%)
Query: 95 LLSFYLKCDQMRNAVKLFDDMPMRDT--VSWNTMVSGFLRNGEFDMGFGFFKRSLELGFY 152
L+S Y+ + +AV L P D WN+++ + NG + F L +
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLS-W 123
Query: 153 QLDQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRK 212
D +F + AC + H L + G+ V VGNAL+ Y +C S S RK
Sbjct: 124 TPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARK 183
Query: 213 VFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKM--HLGLINPNSLTYLSSVMACSGL 270
VF EM V +V++W ++I + + L++F +M G P+++T ++ + C+ L
Sbjct: 184 VFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFG-CRPDNITLVNVLPPCASL 242
Query: 271 QALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVIL 330
G+Q+H + ++ + + L+DMY+KCG +++A +F D VS ++
Sbjct: 243 GTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMV 302
Query: 331 VGFAQNGFEEEAMQLFVKMVKAGIEID--------------------------------- 357
G++Q G E+A++LF KM + I++D
Sbjct: 303 AGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIK 362
Query: 358 PNMVSAVLGVFGVDT--SLGLGKQIHSLIIKS--DFTSNP-----FVNNGLINMYSKCGD 408
PN V+ + + G + +L GK+IH IK D N V N LI+MY+KC
Sbjct: 363 PNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKK 422
Query: 409 LEDSIKVFSRMAP--RNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVE--PTDVTFLS 464
++ + +F ++P R+ V+W MI +++HG+ KALEL EM E + P T
Sbjct: 423 VDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISC 482
Query: 465 LLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYA-------CVVDMVGRAGLLIEARSF 517
L AC+ + + G ++H + R + A C++DM + G + +AR
Sbjct: 483 ALVACASLAALRIG-------KQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLV 535
Query: 518 IERMPVKPDVLVWQALLGACSIHGDSE 544
+ M K +V W +L+ +HG E
Sbjct: 536 FDNMMAKNEV-TWTSLMTGYGMHGYGE 561
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 199/435 (45%), Gaps = 68/435 (15%)
Query: 77 FDNQNVYNVPNATVIWNSLLSFYLKCDQMRNAVKLFDDMPMR----DTVSWNTMVSGFLR 132
F N +V +V V WN++++ Y + + +AV+LF+ M D V+W+ +SG+ +
Sbjct: 287 FSNMSVKDV----VSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQ 342
Query: 133 NGEFDMGFGFFKRSLELGFYQLDQASFTIILSACDRSELSLVSKMIHCL-------VYLC 185
G G ++ L G + ++ + +LS C + K IHC +
Sbjct: 343 RGLGYEALGVCRQMLSSGI-KPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKN 401
Query: 186 GYEEEVTVGNALITSYFKCGSSSSGRKVFGEM--RVRNVITWTAVISGLVQNQLYEEGLK 243
G+ +E V N LI Y KC + R +F + + R+V+TWT +I G Q+ + L+
Sbjct: 402 GHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALE 461
Query: 244 LFVKM--HLGLINPNSLTYLSSVMACSGLQALCEGRQIHGILWKLALQSD---LCIESAL 298
L +M PN+ T +++AC+ L AL G+QIH + L Q + L + + L
Sbjct: 462 LLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHA--YALRNQQNAVPLFVSNCL 519
Query: 299 MDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLFVKMVKAGIEIDP 358
+DMY+KCGS+ DA +F+ + V+ T ++ G+ +G+ EEA+ +F +M + G ++D
Sbjct: 520 IDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLD- 578
Query: 359 NMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSR 418
GV + L HS G ++ ++ F+R
Sbjct: 579 ----------GVTLLVVLYACSHS------------------------GMIDQGMEYFNR 604
Query: 419 MAPRNSVS-----WNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHVG 473
M VS + ++ R G AL L EEM + EP V +++ L C G
Sbjct: 605 MKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPM---EPPPVVWVAFLSCCRIHG 661
Query: 474 LVNKGMEFLKSMTEV 488
V G + +TE+
Sbjct: 662 KVELGEYAAEKITEL 676
Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 118/234 (50%), Gaps = 21/234 (8%)
Query: 329 ILVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSD 388
++ + NG + + LF M D V G +S+ G+ H+L + +
Sbjct: 98 LIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTG 157
Query: 389 FTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYE 448
F SN FV N L+ MYS+C L D+ KVF M+ + VSWNS+I ++A+ G ALE++
Sbjct: 158 FISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFS 217
Query: 449 EMKLE-GVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYA------CV 501
M E G P ++T +++L C+ +G + G ++H + +E C+
Sbjct: 218 RMTNEFGCRPDNITLVNVLPPCASLGTHSLG-------KQLHCFAVTSEMIQNMFVGNCL 270
Query: 502 VDMVGRAGLLIEARSFIERMPVKPDVLVWQALLGACSIHGDSEMGKYA-AEKLF 554
VDM + G++ EA + M VK DV+ W A++ G S++G++ A +LF
Sbjct: 271 VDMYAKCGMMDEANTVFSNMSVK-DVVSWNAMVA-----GYSQIGRFEDAVRLF 318
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 362 bits (928), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 207/605 (34%), Positives = 321/605 (53%), Gaps = 17/605 (2%)
Query: 46 DISRLLSISAKEGHFHLGPSLHASFIKTFEPFDNQNVYNVPNATVIWNSLLSFYLKCDQM 105
+ + LL + E +G +H +K+ D L + Y KC Q+
Sbjct: 137 NFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLD----------LFAMTGLENMYAKCRQV 186
Query: 106 RNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFTIILSA 165
A K+FD MP RD VSWNT+V+G+ +NG M K E + SF I+S
Sbjct: 187 NEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENL----KPSFITIVSV 242
Query: 166 CDR-SELSLVS--KMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNV 222
S L L+S K IH G++ V + AL+ Y KCGS + R++F M RNV
Sbjct: 243 LPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNV 302
Query: 223 ITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGI 282
++W ++I VQN+ +E + +F KM + P ++ + ++ AC+ L L GR IH +
Sbjct: 303 VSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKL 362
Query: 283 LWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEA 342
+L L ++ + ++L+ MY KC V+ A +F + VS +++GFAQNG +A
Sbjct: 363 SVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDA 422
Query: 343 MQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINM 402
+ F +M ++ D +V+ + K IH ++++S N FV L++M
Sbjct: 423 LNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDM 482
Query: 403 YSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTF 462
Y+KCG + + +F M+ R+ +WN+MI + HG G ALEL+EEM+ ++P VTF
Sbjct: 483 YAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTF 542
Query: 463 LSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEARSFIERMP 522
LS++ ACSH GLV G++ M E + I +HY +VD++GRAG L EA FI +MP
Sbjct: 543 LSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMP 602
Query: 523 VKPDVLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDSPAPYILMANIYSCSGRWKERAK 582
VKP V V+ A+LGAC IH + + AAE+LF PD ++L+ANIY + W++ +
Sbjct: 603 VKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQ 662
Query: 583 AIKRMKEMGVDKETGISWIEIEKQVHSFVVDDKMHPQADTIHGVLAELLRLMIDEGYVPN 642
M G+ K G S +EI+ +VHSF HP + I+ L +L+ + + GYVP+
Sbjct: 663 VRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPD 722
Query: 643 KRFIL 647
+L
Sbjct: 723 TNLVL 727
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 141/490 (28%), Positives = 244/490 (49%), Gaps = 24/490 (4%)
Query: 95 LLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKR----SLELG 150
L+S + + + A ++F+ + + V ++TM+ GF + + D FF R +E
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPV 134
Query: 151 FYQLDQASFTIILSAC-DRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSS 209
Y +FT +L C D +EL V K IH L+ G+ ++ L Y KC +
Sbjct: 135 VY-----NFTYLLKVCGDEAELR-VGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNE 188
Query: 210 GRKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSG 269
RKVF M R++++W +++G QN + L++ M + P+ +T +S + A S
Sbjct: 189 ARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSA 248
Query: 270 LQALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVI 329
L+ + G++IHG + S + I +AL+DMY+KCGS+E A Q+F+ E + VS +
Sbjct: 249 LRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSM 308
Query: 330 LVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLG---LGKQIHSLIIK 386
+ + QN +EAM +F KM+ G++ P VS V+G LG G+ IH L ++
Sbjct: 309 IDAYVQNENPKEAMLIFQKMLDEGVK--PTDVS-VMGALHACADLGDLERGRFIHKLSVE 365
Query: 387 SDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALEL 446
N V N LI+MY KC +++ + +F ++ R VSWN+MI FA++G AL
Sbjct: 366 LGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNY 425
Query: 447 YEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVG 506
+ +M+ V+P T++S++ A + + + + +++ + + +VDM
Sbjct: 426 FSQMRSRTVKPDTFTYVSVITAIAELSITHHA-KWIHGVVMRSCLDKNVFVTTALVDMYA 484
Query: 507 RAGLLIEARSFIERMPVKPDVLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDSPAP--Y 564
+ G ++ AR + M + V W A++ HG GK A E Q + P
Sbjct: 485 KCGAIMIARLIFDMMSER-HVTTWNAMIDGYGTHG---FGKAALELFEEMQKGTIKPNGV 540
Query: 565 ILMANIYSCS 574
++ I +CS
Sbjct: 541 TFLSVISACS 550
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 162/303 (53%)
Query: 176 KMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVITWTAVISGLVQN 235
+ I LV+ G +E L++ + + GS +VF + + + + ++ G +
Sbjct: 54 RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKV 113
Query: 236 QLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGILWKLALQSDLCIE 295
++ L+ FV+M + P + + C L G++IHG+L K DL
Sbjct: 114 SDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAM 173
Query: 296 SALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLFVKMVKAGIE 355
+ L +MY+KC V +A ++F+ E D VS I+ G++QNG A+++ M + ++
Sbjct: 174 TGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLK 233
Query: 356 IDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIKV 415
+ +VL + +GK+IH ++S F S ++ L++MY+KCG LE + ++
Sbjct: 234 PSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQL 293
Query: 416 FSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHVGLV 475
F M RN VSWNSMI A+ ++ N +A+ ++++M EGV+PTDV+ + LHAC+ +G +
Sbjct: 294 FDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDL 353
Query: 476 NKG 478
+G
Sbjct: 354 ERG 356
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 184/340 (54%), Gaps = 20/340 (5%)
Query: 267 CSGLQALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSM 326
CS L+ L RQI +++K L + ++ L+ ++ + GSV++A ++FE + V
Sbjct: 47 CSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLY 103
Query: 327 TVILVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIK 386
+L GFA+ ++A+Q FV+M +E + +L V G + L +GK+IH L++K
Sbjct: 104 HTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVK 163
Query: 387 SDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALEL 446
S F+ + F GL NMY+KC + ++ KVF RM R+ VSWN+++A ++++G ALE+
Sbjct: 164 SGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEM 223
Query: 447 YEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACV----- 501
+ M E ++P+ +T +S+L A S + L++ G E+H + R+ + V
Sbjct: 224 VKSMCEENLKPSFITIVSVLPAVSALRLISVG-------KEIHGYAMRSGFDSLVNISTA 276
Query: 502 -VDMVGRAGLLIEARSFIERMPVKPDVLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDS 560
VDM + G L AR + M ++ +V+ W +++ A + + + +K+ L +
Sbjct: 277 LVDMYAKCGSLETARQLFDGM-LERNVVSWNSMIDAYVQNENPKEAMLIFQKM-LDEGVK 334
Query: 561 PAPYILMANIYSCSGRWK-ERAKAIKRMK-EMGVDKETGI 598
P +M +++C+ ER + I ++ E+G+D+ +
Sbjct: 335 PTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSV 374
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 360 bits (923), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 196/588 (33%), Positives = 335/588 (56%), Gaps = 12/588 (2%)
Query: 62 LGPSLHASFIKTFEPFDNQNVYNVPNATVIWNSLLSFYLKCDQMRNAVKLFDDMPMRDTV 121
LG +HAS +K+ + +Y + N+L++ Y +C +M A ++ M D V
Sbjct: 302 LGKEIHASVLKS--STHSSELY-------VCNALIAMYTRCGKMPQAERILRQMNNADVV 352
Query: 122 SWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFTIILSACDRSELSLVSKMIHCL 181
+WN+++ G+++N + FF + G ++ D+ S T I++A R L +H
Sbjct: 353 TWNSLIKGYVQNLMYKEALEFFSDMIAAG-HKSDEVSMTSIIAASGRLSNLLAGMELHAY 411
Query: 182 VYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVITWTAVISGLVQNQLYEEG 241
V G++ + VGN LI Y KC + + F M +++I+WT VI+G QN + E
Sbjct: 412 VIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEA 471
Query: 242 LKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGILWKLALQSDLCIESALMDM 301
L+LF + + + + S + A S L+++ ++IH + + L D I++ L+D+
Sbjct: 472 LELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL-DTVIQNELVDV 530
Query: 302 YSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMV 361
Y KC ++ A ++FE + D VS T ++ A NG E EA++LF +MV+ G+ D +
Sbjct: 531 YGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVAL 590
Query: 362 SAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAP 421
+L ++L G++IH +++ F + +++MY+ CGDL+ + VF R+
Sbjct: 591 LCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIER 650
Query: 422 RNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGMEF 481
+ + + SMI A+ HG G A+EL+++M+ E V P ++FL+LL+ACSH GL+++G F
Sbjct: 651 KGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGF 710
Query: 482 LKSMTEVHRISPRAEHYACVVDMVGRAGLLIEARSFIERMPVKPDVLVWQALLGACSIHG 541
LK M + + P EHY C+VDM+GRA ++EA F++ M +P VW ALL AC H
Sbjct: 711 LKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHS 770
Query: 542 DSEMGKYAAEKLFLAQPDSPAPYILMANIYSCSGRWKERAKAIKRMKEMGVDKETGISWI 601
+ E+G+ AA++L +P +P +L++N+++ GRW + K +MK G++K G SWI
Sbjct: 771 EKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWI 830
Query: 602 EIEKQVHSFVVDDKMHPQADTIHGVLAELLRLMIDE-GYVPNKRFILH 648
E++ +VH F DK HP++ I+ L+E+ R + E GYV + +F+LH
Sbjct: 831 EMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLH 878
Score = 192 bits (488), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 139/500 (27%), Positives = 249/500 (49%), Gaps = 25/500 (5%)
Query: 50 LLSISAKEGHFHLGPSLHASFIKTFEPFDNQNVYNVPNATVIWNSLLSFYLKCDQMRNAV 109
+L + K G LH+ KTF F+ + L+ Y KC + +A
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFE---------LDFLAGKLVFMYGKCGSLDDAE 136
Query: 110 KLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFTIILSACDRS 169
K+FD+MP R +WNTM+ ++ NGE + ++ + L +SF +L AC +
Sbjct: 137 KVFDEMPDRTAFAWNTMIGAYVSNGEPASALALY-WNMRVEGVPLGLSSFPALLKACAKL 195
Query: 170 ELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVR-NVITWTAV 228
+H L+ GY + NAL++ Y K S+ R++F + + + + W ++
Sbjct: 196 RDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSI 255
Query: 229 ISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGILWKLAL 288
+S + E L+LF +MH+ PNS T +S++ AC G G++IH + K +
Sbjct: 256 LSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSST 315
Query: 289 Q-SDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLFV 347
S+L + +AL+ MY++CG + A +I D V+ ++ G+ QN +EA++ F
Sbjct: 316 HSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFS 375
Query: 348 KMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCG 407
M+ AG + D +++++ G ++L G ++H+ +IK + SN V N LI+MYSKC
Sbjct: 376 DMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCN 435
Query: 408 DLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLLH 467
+ F RM ++ +SW ++IA +A++ +ALEL+ ++ + +E ++ S+L
Sbjct: 436 LTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILR 495
Query: 468 ACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACV-----VDMVGRAGLLIEARSFIERMP 522
A S V K M +K E+H R V VD+ G+ + A E +
Sbjct: 496 ASS----VLKSMLIVK---EIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIK 548
Query: 523 VKPDVLVWQALLGACSIHGD 542
K DV+ W +++ + +++G+
Sbjct: 549 GK-DVVSWTSMISSSALNGN 567
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 184/386 (47%), Gaps = 13/386 (3%)
Query: 158 SFTIILSACDRSELSLVSKMIHCLVY--LCGYEEEVTVGNALITSYFKCGSSSSGRKVFG 215
+F +L C + + +H ++ +E + G L+ Y KCGS KVF
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGK-LVFMYGKCGSLDDAEKVFD 140
Query: 216 EMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCE 275
EM R W +I V N L L+ M + + ++ + + AC+ L+ +
Sbjct: 141 EMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRS 200
Query: 276 GRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFE-FAEELDGVSMTVILVGFA 334
G ++H +L KL S I +AL+ MY+K + A ++F+ F E+ D V IL ++
Sbjct: 201 GSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS 260
Query: 335 QNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVD--TSLGLGKQIHSLIIKSD-FTS 391
+G E ++LF +M G PN + V + D + LGK+IH+ ++KS +S
Sbjct: 261 TSGKSLETLELFREMHMTGPA--PNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSS 318
Query: 392 NPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMK 451
+V N LI MY++CG + + ++ +M + V+WNS+I + ++ +ALE + +M
Sbjct: 319 ELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMI 378
Query: 452 LEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGLL 511
G + +V+ S++ A + + GME L + H + ++DM + L
Sbjct: 379 AAGHKSDEVSMTSIIAASGRLSNLLAGME-LHAYVIKHGWDSNLQVGNTLIDMYSKCNLT 437
Query: 512 IE-ARSFIERMPVKPDVLVWQALLGA 536
R+F+ RM K D++ W ++
Sbjct: 438 CYMGRAFL-RMHDK-DLISWTTVIAG 461
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 110/220 (50%), Gaps = 17/220 (7%)
Query: 364 VLGVFGVDTSLGLGKQIHSLIIKSDFTSNP--FVNNGLINMYSKCGDLEDSIKVFSRMAP 421
VL + G ++ G+Q+HS I K+ F S F+ L+ MY KCG L+D+ KVF M
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKT-FPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPD 144
Query: 422 RNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGMEF 481
R + +WN+MI A+ +G AL LY M++EGV +F +LL AC+ + + G
Sbjct: 145 RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSG--- 201
Query: 482 LKSMTEVHRISPRAEHYA------CVVDMVGRAGLLIEARSFIERMPVKPDVLVWQALLG 535
+E+H + + +++ +V M + L AR + K D ++W ++L
Sbjct: 202 ----SELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILS 257
Query: 536 ACSIHGDSEMGKYAAEKLFLAQPDSPAPYILMANIYSCSG 575
+ S G S ++ + P +P Y +++ + +C G
Sbjct: 258 SYSTSGKSLETLELFREMHMTGP-APNSYTIVSALTACDG 296
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 359 bits (922), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 189/542 (34%), Positives = 307/542 (56%), Gaps = 2/542 (0%)
Query: 91 IWNSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELG 150
+ +SL+ Y+KC +M A+++FD++ D V+W++MVSGF +NG FF+R +
Sbjct: 98 VGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMAS 157
Query: 151 FYQLDQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSG 210
D+ + ++SAC + S + + +H V G+ ++++ N+L+ Y K +
Sbjct: 158 DVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEA 217
Query: 211 RKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGL 270
+F + ++VI+W+ VI+ VQN E L +F M PN T L + AC+
Sbjct: 218 VNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAA 277
Query: 271 QALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVIL 330
L +GR+ H + + L++++ + +AL+DMY KC S E+A+ +F D VS ++
Sbjct: 278 HDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALI 337
Query: 331 VGFAQNGFEEEAMQLF-VKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDF 389
GF NG +++ F + +++ D ++ VLG L K HS +IK F
Sbjct: 338 SGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGF 397
Query: 390 TSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEE 449
SNPF+ L+ +YS+CG L ++ KVF+ +A +++V W S+I + HG G KALE +
Sbjct: 398 DSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNH 457
Query: 450 M-KLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRA 508
M K V+P +VTFLS+L ACSH GL+++G+ K M +R++P EHYA +VD++GR
Sbjct: 458 MVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRV 517
Query: 509 GLLIEARSFIERMPVKPDVLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDSPAPYILMA 568
G L A +RMP P + LLGAC IH + EM + A+KLF + + Y+LM+
Sbjct: 518 GDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMS 577
Query: 569 NIYSCSGRWKERAKAIKRMKEMGVDKETGISWIEIEKQVHSFVVDDKMHPQADTIHGVLA 628
N+Y G W+ K +K+ G+ K S IEI ++VH FV DD++HP+ + ++G+L
Sbjct: 578 NVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLK 637
Query: 629 EL 630
EL
Sbjct: 638 EL 639
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/490 (24%), Positives = 229/490 (46%), Gaps = 22/490 (4%)
Query: 96 LSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFD---MGFGFFKRSLELGFY 152
+ F K +A ++F +M R WNT++ R +++ F R E
Sbjct: 1 MGFCRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEE---- 56
Query: 153 QLDQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVT------VGNALITSYFKCGS 206
+ D + + L AC +MIH V +++VT VG++LI Y KCG
Sbjct: 57 KPDNFTLPVALKACGELREVNYGEMIHGFV-----KKDVTLGSDLYVGSSLIYMYIKCGR 111
Query: 207 SSSGRKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGL-INPNSLTYLSSVM 265
++F E+ +++TW++++SG +N + ++ F +M + + P+ +T ++ V
Sbjct: 112 MIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVS 171
Query: 266 ACSGLQALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVS 325
AC+ L GR +HG + + +DL + ++L++ Y+K + ++A +F+ E D +S
Sbjct: 172 ACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVIS 231
Query: 326 MTVILVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLII 385
+ ++ + QNG EA+ +F M+ G E + V VL L G++ H L I
Sbjct: 232 WSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAI 291
Query: 386 KSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALE 445
+ + V+ L++MY KC E++ VFSR+ ++ VSW ++I+ F +G +++E
Sbjct: 292 RKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIE 351
Query: 446 LYEEMKLE-GVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDM 504
+ M LE P + + +L +CS +G + + F S + A +V++
Sbjct: 352 EFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCF-HSYVIKYGFDSNPFIGASLVEL 410
Query: 505 VGRAGLLIEARSFIERMPVKPDVLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDSPAPY 564
R G L A + +K D +VW +L+ IHG + + P
Sbjct: 411 YSRCGSLGNASKVFNGIALK-DTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEV 469
Query: 565 ILMANIYSCS 574
++ + +CS
Sbjct: 470 TFLSILSACS 479
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 47/89 (52%)
Query: 83 YNVPNATVIWNSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGF 142
Y + I SL+ Y +C + NA K+F+ + ++DTV W ++++G+ +G+
Sbjct: 395 YGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALET 454
Query: 143 FKRSLELGFYQLDQASFTIILSACDRSEL 171
F ++ + ++ +F ILSAC + L
Sbjct: 455 FNHMVKSSEVKPNEVTFLSILSACSHAGL 483
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 358 bits (918), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 205/597 (34%), Positives = 325/597 (54%), Gaps = 18/597 (3%)
Query: 39 LVLDNYVDISRLLSISAKEGHFHLGPSLHASFIKTFEPFDNQNVYNVPNATVIWNSLLSF 98
+V D Y+ +S +LS + G +HA ++ Y + + N L+
Sbjct: 245 VVPDGYI-LSTVLSACSILPFLEGGKQIHAHILR----------YGLEMDASLMNVLIDS 293
Query: 99 YLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQAS 158
Y+KC ++ A KLF+ MP ++ +SW T++SG+ +N F + G + D +
Sbjct: 294 YVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGL-KPDMYA 352
Query: 159 FTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMR 218
+ IL++C +H + V N+LI Y KC + RKVF
Sbjct: 353 CSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFA 412
Query: 219 VRNVITWTAVISGL----VQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALC 274
+V+ + A+I G Q +L+E L +F M LI P+ LT++S + A + L +L
Sbjct: 413 AADVVLFNAMIEGYSRLGTQWELHE-ALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLG 471
Query: 275 EGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFA 334
+QIHG+++K L D+ SAL+D+YS C ++D+ +F+ + D V + G+
Sbjct: 472 LSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYV 531
Query: 335 QNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPF 394
Q EEA+ LF+++ + D + ++ G S+ LG++ H ++K NP+
Sbjct: 532 QQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPY 591
Query: 395 VNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEG 454
+ N L++MY+KCG ED+ K F A R+ V WNS+I+++A HG G KAL++ E+M EG
Sbjct: 592 ITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEG 651
Query: 455 VEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEA 514
+EP +TF+ +L ACSH GLV G++ + M I P EHY C+V ++GRAG L +A
Sbjct: 652 IEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFG-IEPETEHYVCMVSLLGRAGRLNKA 710
Query: 515 RSFIERMPVKPDVLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDSPAPYILMANIYSCS 574
R IE+MP KP +VW++LL C+ G+ E+ ++AAE L+ P + +++NIY+
Sbjct: 711 RELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASK 770
Query: 575 GRWKERAKAIKRMKEMGVDKETGISWIEIEKQVHSFVVDDKMHPQADTIHGVLAELL 631
G W E K +RMK GV KE G SWI I K+VH F+ DK H +A+ I+ VL +LL
Sbjct: 771 GMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLL 827
Score = 199 bits (507), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 144/505 (28%), Positives = 253/505 (50%), Gaps = 19/505 (3%)
Query: 46 DISRLLSISAKEGHFHLGPSLHASFIKTFEPFDNQNVYNVPNATVIWNSLLSFYLKCDQM 105
+ +RLL + A + H +H I V+ + T + N L++ Y + M
Sbjct: 46 EFARLLQLRASDDLLHYQNVVHGQII----------VWGLELDTYLSNILINLYSRAGGM 95
Query: 106 RNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMG---FGFFKRSLELGFYQLDQASFTII 162
A K+F+ MP R+ VSW+TMVS +G ++ F F R+ + + +SF
Sbjct: 96 VYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQA 155
Query: 163 LSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNV 222
S D +V ++ LV G++ +V VG LI Y K G+ R VF + ++
Sbjct: 156 CSGLDGRGRWMVFQLQSFLVK-SGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKST 214
Query: 223 ITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGI 282
+TWT +ISG V+ L+LF ++ + P+ + + ACS L L G+QIH
Sbjct: 215 VTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAH 274
Query: 283 LWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEA 342
+ + L+ D + + L+D Y KCG V A ++F + +S T +L G+ QN +EA
Sbjct: 275 ILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEA 334
Query: 343 MQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINM 402
M+LF M K G++ D S++L +LG G Q+H+ IK++ ++ +V N LI+M
Sbjct: 335 MELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDM 394
Query: 403 YSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGF---KALELYEEMKLEGVEPTD 459
Y+KC L D+ KVF A + V +N+MI ++R G + +AL ++ +M+ + P+
Sbjct: 395 YAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSL 454
Query: 460 VTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEARSFIE 519
+TF+SLL A + + + + M + + ++ + ++D+ L ++R +
Sbjct: 455 LTFVSLLRASASLTSLGLSKQIHGLMFK-YGLNLDIFAGSALIDVYSNCYCLKDSRLVFD 513
Query: 520 RMPVKPDVLVWQALLGACSIHGDSE 544
M VK D+++W ++ ++E
Sbjct: 514 EMKVK-DLVIWNSMFAGYVQQSENE 537
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040, mitochondrial
OS=Arabidopsis thaliana GN=PCMP-E88 PE=2 SV=1
Length = 1028
Score = 357 bits (917), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 211/604 (34%), Positives = 326/604 (53%), Gaps = 18/604 (2%)
Query: 41 LDNYVDISRLLSISAKEGHFHLGPSLHASFIKTFEPFDNQNVYNVPNATVIWNSLLSFYL 100
+D++ + LLS A +G H+ IK + + N+L+ Y
Sbjct: 426 IDDFT-FTSLLSTCAASHDLEMGSQFHSIIIKK----------KLAKNLFVGNALVDMYA 474
Query: 101 KCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFT 160
KC + +A ++F+ M RD V+WNT++ ++++ F FKR G D A
Sbjct: 475 KCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVS-DGACLA 533
Query: 161 IILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVR 220
L AC K +HCL CG + ++ G++LI Y KCG RKVF +
Sbjct: 534 STLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEW 593
Query: 221 NVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIH 280
+V++ A+I+G QN L EE + LF +M +NP+ +T+ + V AC ++L G Q H
Sbjct: 594 SVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFH 652
Query: 281 GILWKLALQSD-LCIESALMDMYSKCGSVEDAWQIF-EFAEELDGVSMTVILVGFAQNGF 338
G + K S+ + +L+ MY + +A +F E + V T ++ G +QNGF
Sbjct: 653 GQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGF 712
Query: 339 EEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNG 398
EEA++ + +M G+ D VL V V +SL G+ IHSLI + +N
Sbjct: 713 YEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNT 772
Query: 399 LINMYSKCGDLEDSIKVFSRMAPR-NSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEP 457
LI+MY+KCGD++ S +VF M R N VSWNS+I +A++G AL++++ M+ + P
Sbjct: 773 LIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMP 832
Query: 458 TDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEARSF 517
++TFL +L ACSH G V+ G + + M + I R +H AC+VD++GR G L EA F
Sbjct: 833 DEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDF 892
Query: 518 IERMPVKPDVLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDSPAPYILMANIYSCSGRW 577
IE +KPD +W +LLGAC IHGD G+ +AEKL +P + + Y+L++NIY+ G W
Sbjct: 893 IEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCW 952
Query: 578 KERAKAIKR-MKEMGVDKETGISWIEIEKQVHSFVVDDKMHPQADTIHGVLAELLRLMID 636
E+A A+++ M++ GV K G SWI++E++ H F DK H + I L +L LM D
Sbjct: 953 -EKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMKD 1011
Query: 637 EGYV 640
+ V
Sbjct: 1012 DAVV 1015
Score = 221 bits (563), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 153/531 (28%), Positives = 258/531 (48%), Gaps = 40/531 (7%)
Query: 58 GHFHLGPSLHASFIKTFEPFDNQNVYNVPNATVIWNSLLSFYLKCDQMRNAVKLFDDMPM 117
+ LG +HA IK N+Y + +SL+S Y KC++M A K+F+ +
Sbjct: 341 ANLDLGLVVHAEAIKLGLA---SNIY-------VGSSLVSMYSKCEKMEAAAKVFEALEE 390
Query: 118 RDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFTIILSACDRSELSLVSKM 177
++ V WN M+ G+ NGE F G Y +D +FT +LS C S +
Sbjct: 391 KNDVFWNAMIRGYAHNGESHKVMELFMDMKSSG-YNIDDFTFTSLLSTCAASHDLEMGSQ 449
Query: 178 IHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVITWTAVISGLVQNQL 237
H ++ + + VGNAL+ Y KCG+ R++F M R+ +TW +I VQ++
Sbjct: 450 FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDEN 509
Query: 238 YEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGILWKLALQSDLCIESA 297
E LF +M+L I + S++ AC+ + L +G+Q+H + K L DL S+
Sbjct: 510 ESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSS 569
Query: 298 LMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLFVKMVKAGIEID 357
L+DMYSKCG ++DA ++F E VSM ++ G++QN EEA+ LF +M+ G+
Sbjct: 570 LIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPS 628
Query: 358 PNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTS-NPFVNNGLINMYSKCGDLEDSIKVF 416
+ ++ SL LG Q H I K F+S ++ L+ MY + ++ +F
Sbjct: 629 EITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALF 688
Query: 417 SRM-APRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHVGLV 475
S + +P++ V W M++ +++G +AL+ Y+EM+ +GV P TF+++L CS
Sbjct: 689 SELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCS----- 743
Query: 476 NKGMEFLKSMTEVHRISPRAEHYA---------CVVDMVGRAGLLIEARSFIERMPVKPD 526
L S+ E I H A ++DM + G + + + M + +
Sbjct: 744 -----VLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSN 798
Query: 527 VLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDS---PAPYILMANIYSCS 574
V+ W +L+ + +G +E A K+F + S P + + +CS
Sbjct: 799 VVSWNSLINGYAKNGYAE----DALKIFDSMRQSHIMPDEITFLGVLTACS 845
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 143/519 (27%), Positives = 242/519 (46%), Gaps = 63/519 (12%)
Query: 11 NSNFPFCSSLVSPFITKIIQDPTSSTSKLVLDNYVDISRLLSISAKEGHFHLGPSLHASF 70
NS SS+ P K+++ S + N S +LS A+E + G +H S
Sbjct: 129 NSMLSMYSSIGKP--GKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSM 186
Query: 71 IKTFEPFDNQNVYNVPNATVIWNSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGF 130
IK + + +L+ Y KCD++ +A ++F+ + +TV W + SG+
Sbjct: 187 IKM----------GLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGY 236
Query: 131 LRNGEFDMGFGFFKRSLELGFYQLDQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEE 190
++ G + F+R + G ++ D +F +
Sbjct: 237 VKAGLPEEAVLVFERMRDEG-HRPDHLAFVTV---------------------------- 267
Query: 191 VTVGNALITSYFKCGSSSSGRKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHL 250
I +Y + G R +FGEM +V+ W +ISG + ++ F M
Sbjct: 268 -------INTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRK 320
Query: 251 GLINPNSLTYLSSVMACSGLQA-LCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVE 309
+ T L SV++ G+ A L G +H KL L S++ + S+L+ MYSKC +E
Sbjct: 321 SSVKSTRST-LGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKME 379
Query: 310 DAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFG 369
A ++FE EE + V ++ G+A NG + M+LF+ M +G ID +++L
Sbjct: 380 AAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCA 439
Query: 370 VDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNS 429
L +G Q HS+IIK N FV N L++MY+KCG LED+ ++F RM R++V+WN+
Sbjct: 440 ASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNT 499
Query: 430 MIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVH 489
+I ++ + N +A +L++ M L G+ S L AC+HV + +G +VH
Sbjct: 500 IIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQG-------KQVH 552
Query: 490 RIS-----PRAEHY-ACVVDMVGRAGLLIEARSFIERMP 522
+S R H + ++DM + G++ +AR +P
Sbjct: 553 CLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 194 bits (492), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 129/452 (28%), Positives = 232/452 (51%), Gaps = 10/452 (2%)
Query: 94 SLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQ 153
++++ Y++ ++++A LF +M D V+WN M+SG + G + +F ++ +
Sbjct: 266 TVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYF-FNMRKSSVK 324
Query: 154 LDQASFTIILSACD---RSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSG 210
+++ +LSA +L LV +H G + VG++L++ Y KC +
Sbjct: 325 STRSTLGSVLSAIGIVANLDLGLV---VHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAA 381
Query: 211 RKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGL 270
KVF + +N + W A+I G N + ++LF+ M N + T+ S + C+
Sbjct: 382 AKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAAS 441
Query: 271 QALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVIL 330
L G Q H I+ K L +L + +AL+DMY+KCG++EDA QIFE + D V+ I+
Sbjct: 442 HDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTII 501
Query: 331 VGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFT 390
+ Q+ E EA LF +M GI D +++ L L GKQ+H L +K
Sbjct: 502 GSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLD 561
Query: 391 SNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEM 450
+ + LI+MYSKCG ++D+ KVFS + + VS N++IA ++++ N +A+ L++EM
Sbjct: 562 RDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEM 620
Query: 451 KLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYA-CVVDMVGRAG 509
GV P+++TF +++ AC + G +F +T+ S E+ ++ M +
Sbjct: 621 LTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITK-RGFSSEGEYLGISLLGMYMNSR 679
Query: 510 LLIEARSFIERMPVKPDVLVWQALLGACSIHG 541
+ EA + + +++W ++ S +G
Sbjct: 680 GMTEACALFSELSSPKSIVLWTGMMSGHSQNG 711
Score = 183 bits (465), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 125/444 (28%), Positives = 209/444 (47%), Gaps = 39/444 (8%)
Query: 93 NSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFY 152
N+++ Y KC Q+ A K FD + +D +WN+M+S + G+ F E +
Sbjct: 99 NAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIF 157
Query: 153 QLDQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRK 212
++ +F+I+LS C R + IHC + G E G AL+ Y KC S R+
Sbjct: 158 P-NKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARR 216
Query: 213 VFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQA 272
VF + N + WT + SG V+ L EE + +F +M P+ L +++
Sbjct: 217 VFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVT---------- 266
Query: 273 LCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVG 332
+++ Y + G ++DA +F D V+ V++ G
Sbjct: 267 -------------------------VINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISG 301
Query: 333 FAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSN 392
+ G E A++ F M K+ ++ + + +VL G+ +L LG +H+ IK SN
Sbjct: 302 HGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASN 361
Query: 393 PFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKL 452
+V + L++MYSKC +E + KVF + +N V WN+MI +A +G K +EL+ +MK
Sbjct: 362 IYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKS 421
Query: 453 EGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGLLI 512
G D TF SLL C+ + G +F S+ +++ +VDM + G L
Sbjct: 422 SGYNIDDFTFTSLLSTCAASHDLEMGSQF-HSIIIKKKLAKNLFVGNALVDMYAKCGALE 480
Query: 513 EARSFIERMPVKPDVLVWQALLGA 536
+AR ERM + +V W ++G+
Sbjct: 481 DARQIFERMCDRDNV-TWNTIIGS 503
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 164/372 (44%), Gaps = 42/372 (11%)
Query: 174 VSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVITWTAVISGLV 233
+ K +H + G + E +GNA++ Y KC S K F + ++V W +++S
Sbjct: 78 IGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYS 136
Query: 234 QNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGILWKLALQSDLC 293
+ L+ FV + I PN T+ + C+ + GRQIH + K+ L+ +
Sbjct: 137 SIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSY 196
Query: 294 IESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLFVKMVKAG 353
AL+DMY+KC + DA ++FE+ + + V T + G+ + G EEA+ +F +M G
Sbjct: 197 CGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEG 256
Query: 354 IEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSI 413
P+ ++ V +IN Y + G L+D+
Sbjct: 257 HR--PDHLAFVT---------------------------------VINTYIRLGKLKDAR 281
Query: 414 KVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHVG 473
+F M+ + V+WN MI+ + G A+E + M+ V+ T T S+L A V
Sbjct: 282 LLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVA 341
Query: 474 LVNKGMEFLKSMTEVHRISPRAEHY--ACVVDMVGRAGLLIEARSFIERMPVKPDVLVWQ 531
++ G L E ++ + Y + +V M + + A E + K DV W
Sbjct: 342 NLDLG---LVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVF-WN 397
Query: 532 ALLGACSIHGDS 543
A++ + +G+S
Sbjct: 398 AMIRGYAHNGES 409
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 106/202 (52%), Gaps = 1/202 (0%)
Query: 272 ALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILV 331
AL G+ +H L + S+ + +A++D+Y+KC V A + F+F E+ D + +L
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEK-DVTAWNSMLS 133
Query: 332 GFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTS 391
++ G + ++ FV + + I + S VL +T++ G+QIH +IK
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 392 NPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMK 451
N + L++MY+KC + D+ +VF + N+V W + + + + G +A+ ++E M+
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 452 LEGVEPTDVTFLSLLHACSHVG 473
EG P + F+++++ +G
Sbjct: 254 DEGHRPDHLAFVTVINTYIRLG 275
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 357 bits (916), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 209/587 (35%), Positives = 328/587 (55%), Gaps = 22/587 (3%)
Query: 68 ASFIKTFEPFDNQNVYNVPNATVIWNSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMV 127
A+F T EP NV++ +N ++ Y K ++ A +LFD++P DTVS+NT++
Sbjct: 64 AAFYSTEEP----NVFS-------YNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLI 112
Query: 128 SGFLRNGEFDMGFGFFKRSLELGFYQLDQASFT-IILSACDRSELSLVSKMIHCLVYLCG 186
SG+ E FKR +LGF ++D + + +I + CDR +L K +HC G
Sbjct: 113 SGYADARETFAAMVLFKRMRKLGF-EVDGFTLSGLIAACCDRVDLI---KQLHCFSVSGG 168
Query: 187 YEEEVTVGNALITSYFKCGSSSSGRKVF-GEMRVRNVITWTAVISGLVQNQLYEEGLKLF 245
++ +V NA +T Y K G VF G +R+ ++W ++I Q++ + L L+
Sbjct: 169 FDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALY 228
Query: 246 VKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGILWKLALQSDLCIESALMDMYSKC 305
+M + T S + A + L L GRQ HG L K + + S L+D YSKC
Sbjct: 229 KEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKC 288
Query: 306 GSVE---DAWQIFEFAEELDGVSMTVILVGFAQNG-FEEEAMQLFVKMVKAGIEIDPNMV 361
G + D+ ++F+ D V ++ G++ N EEA++ F +M + G D
Sbjct: 289 GGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSF 348
Query: 362 SAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPF-VNNGLINMYSKCGDLEDSIKVFSRMA 420
V +S KQIH L IKS SN VNN LI++Y K G+L+D+ VF RM
Sbjct: 349 VCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP 408
Query: 421 PRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGME 480
N+VS+N MI +A+HG+G +AL LY+ M G+ P +TF+++L AC+H G V++G E
Sbjct: 409 ELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQE 468
Query: 481 FLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEARSFIERMPVKPDVLVWQALLGACSIH 540
+ +M E +I P AEHY+C++D++GRAG L EA FI+ MP KP + W ALLGAC H
Sbjct: 469 YFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKH 528
Query: 541 GDSEMGKYAAEKLFLAQPDSPAPYILMANIYSCSGRWKERAKAIKRMKEMGVDKETGISW 600
+ + + AA +L + QP + PY+++AN+Y+ + +W+E A K M+ + K+ G SW
Sbjct: 529 KNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSW 588
Query: 601 IEIEKQVHSFVVDDKMHPQADTIHGVLAELLRLMIDEGYVPNKRFIL 647
IE++K+ H FV +D HP ++ L E+++ M GYV +K++ +
Sbjct: 589 IEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAM 635
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/462 (24%), Positives = 197/462 (42%), Gaps = 56/462 (12%)
Query: 173 LVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVITWTAVISGL 232
K +H L + N + Y KCG S R F NV ++ ++
Sbjct: 25 FTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAY 84
Query: 233 VQNQLYEEGLKLFVKMHLGLINPNSLTYLSSV---------------------------- 264
++ +LF + + P++++Y + +
Sbjct: 85 AKDSKIHIARQLFDE----IPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDG 140
Query: 265 MACSGLQALCEGR-----QIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAE 319
SGL A C R Q+H S + +A + YSK G + +A +F +
Sbjct: 141 FTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMD 200
Query: 320 EL-DGVSMTVILVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGK 378
EL D VS ++V + Q+ +A+ L+ +M+ G +ID +++VL L G+
Sbjct: 201 ELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGR 260
Query: 379 QIHSLIIKSDFTSNPFVNNGLINMYSKCGDLE---DSIKVFSRMAPRNSVSWNSMIAAFA 435
Q H +IK+ F N V +GLI+ YSKCG + DS KVF + + V WN+MI+ ++
Sbjct: 261 QFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYS 320
Query: 436 RHGN-GFKALELYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPR 494
+ +A++ + +M+ G P D +F+ + ACS++ ++ + + H S R
Sbjct: 321 MNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNR 380
Query: 495 AEHYACVVDMVGRAGLLIEARSFIERMPVKPDVLVWQALLGACSIHGDSEMGKYAAEKLF 554
++ + ++G L +AR +RMP A+ C I G ++ G + E L
Sbjct: 381 ISVNNALISLYYKSGNLQDARWVFDRMP------ELNAVSFNCMIKGYAQHG-HGTEALL 433
Query: 555 LAQP--DS---PAPYILMANIYSCS--GRWKERAKAIKRMKE 589
L Q DS P +A + +C+ G+ E + MKE
Sbjct: 434 LYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKE 475
Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 135/302 (44%), Gaps = 37/302 (12%)
Query: 273 LCEGRQIHGILWKLALQSDLCIESALMDMYSKCG----------SVED------------ 310
L G+ +H + K + S + + +++YSKCG S E+
Sbjct: 24 LFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKA 83
Query: 311 ---------AWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMV 361
A Q+F+ + D VS ++ G+A AM LF +M K G E+D +
Sbjct: 84 YAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTL 143
Query: 362 SAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAP 421
S ++ + L KQ+H + F S VNN + YSK G L +++ VF M
Sbjct: 144 SGLIA--ACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDE 201
Query: 422 -RNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGME 480
R+ VSWNSMI A+ +H G KAL LY+EM +G + T S+L+A + + + G +
Sbjct: 202 LRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQ 261
Query: 481 FLKSMTEV--HRISPRAEHYACVVDMVGRAGLLIEARSFIERMPVKPDVLVWQALLGACS 538
F + + H+ S G + ++ + + + PD++VW ++ S
Sbjct: 262 FHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEI-LSPDLVVWNTMISGYS 320
Query: 539 IH 540
++
Sbjct: 321 MN 322
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 44/209 (21%)
Query: 370 VDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDL-------------------- 409
+ L GK +H+L +KS S+ +++N +N+YSKCG L
Sbjct: 20 AERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNV 79
Query: 410 ------EDSI-----KVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPT 458
+DS ++F + ++VS+N++I+ +A F A+ L++ M+ G E
Sbjct: 80 IVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVD 139
Query: 459 DVTFLSLLHA-CSHVGLVNKGMEFLKSMTEVHRISPRAEHYACV----VDMVGRAGLLIE 513
T L+ A C V L+ + F +S + Y+ V V + GLL E
Sbjct: 140 GFTLSGLIAACCDRVDLIKQLHCF--------SVSGGFDSYSSVNNAFVTYYSKGGLLRE 191
Query: 514 ARSFIERMPVKPDVLVWQALLGACSIHGD 542
A S M D + W +++ A H +
Sbjct: 192 AVSVFYGMDELRDEVSWNSMIVAYGQHKE 220
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 356 bits (913), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 193/587 (32%), Positives = 306/587 (52%), Gaps = 30/587 (5%)
Query: 92 WNSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGF 151
WN+LL Y K + F+ +P RD V+WN ++ G+ +G + +
Sbjct: 75 WNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFS 134
Query: 152 YQLDQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGR 211
L + + +L + + K IH V G+E + VG+ L+ Y G S +
Sbjct: 135 ANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAK 194
Query: 212 KVFGEMRVRNVI------------------------------TWTAVISGLVQNQLYEEG 241
KVF + RN + +W A+I GL QN L +E
Sbjct: 195 KVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEA 254
Query: 242 LKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGILWKLALQSDLCIESALMDM 301
++ F +M + + + + S + AC GL A+ EG+QIH + + Q + + SAL+DM
Sbjct: 255 IECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDM 314
Query: 302 YSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMV 361
Y KC + A +F+ ++ + VS T ++VG+ Q G EEA+++F+ M ++GI+ D +
Sbjct: 315 YCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTL 374
Query: 362 SAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAP 421
+ +SL G Q H I S V+N L+ +Y KCGD++DS ++F+ M
Sbjct: 375 GQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNV 434
Query: 422 RNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGMEF 481
R++VSW +M++A+A+ G + ++L+++M G++P VT ++ ACS GLV KG +
Sbjct: 435 RDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRY 494
Query: 482 LKSMTEVHRISPRAEHYACVVDMVGRAGLLIEARSFIERMPVKPDVLVWQALLGACSIHG 541
K MT + I P HY+C++D+ R+G L EA FI MP PD + W LL AC G
Sbjct: 495 FKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKG 554
Query: 542 DSEMGKYAAEKLFLAQPDSPAPYILMANIYSCSGRWKERAKAIKRMKEMGVDKETGISWI 601
+ E+GK+AAE L P PA Y L+++IY+ G+W A+ + M+E V KE G SWI
Sbjct: 555 NLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWI 614
Query: 602 EIEKQVHSFVVDDKMHPQADTIHGVLAELLRLMIDEGYVPNKRFILH 648
+ + ++HSF DD+ P D I+ L EL +ID GY P+ F+ H
Sbjct: 615 KWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHH 661
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/451 (28%), Positives = 228/451 (50%), Gaps = 32/451 (7%)
Query: 45 VDISRLLSISAKEGHFHLGPSLHASFIK-TFEPF------------------DNQNV-YN 84
V + +L +S+ GH LG +H IK FE + D + V Y
Sbjct: 140 VTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYG 199
Query: 85 VPNA-TVIWNSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFF 143
+ + TV++NSL+ L C + +A++LF M +D+VSW M+ G +NG F
Sbjct: 200 LDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKGLAQNGLAKEAIECF 258
Query: 144 KRSLELGFYQLDQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFK 203
R +++ ++DQ F +L AC K IH + +++ + VG+ALI Y K
Sbjct: 259 -REMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCK 317
Query: 204 CGSSSSGRKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSS 263
C + VF M+ +NV++WTA++ G Q EE +K+F+ M I+P+ T +
Sbjct: 318 CKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQA 377
Query: 264 VMACSGLQALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDG 323
+ AC+ + +L EG Q HG L + + ++L+ +Y KCG ++D+ ++F D
Sbjct: 378 ISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDA 437
Query: 324 VSMTVILVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSL 383
VS T ++ +AQ G E +QLF KMV+ G++ D ++ V+ + G++ L
Sbjct: 438 VSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKL 497
Query: 384 IIKSDFTSNPFVNN--GLINMYSKCGDLEDSIKVFSRMA-PRNSVSWNSMIAAFARHGN- 439
+ S++ P + + +I+++S+ G LE++++ + M P +++ W ++++A GN
Sbjct: 498 MT-SEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNL 556
Query: 440 --GFKALELYEEMKLEGVEPTDVTFLSLLHA 468
G A E ++L+ P T LS ++A
Sbjct: 557 EIGKWAAE--SLIELDPHHPAGYTLLSSIYA 585
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 150/325 (46%), Gaps = 50/325 (15%)
Query: 289 QSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLFVK 348
Q +L + L+ YSK G + + FE + DGV+ V++ G++ +G A++ +
Sbjct: 69 QPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNT 128
Query: 349 MVKAGIEIDPNMVSAVL-GVFGVDTSLG---LGKQIHSLIIKSDFTSNPFVNNGLINMYS 404
M++ + N+ L + + +S G LGKQIH +IK F S V + L+ MY+
Sbjct: 129 MMR---DFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYA 185
Query: 405 KCGDLEDSIKVFSRMAPRN------------------------------SVSWNSMIAAF 434
G + D+ KVF + RN SVSW +MI
Sbjct: 186 NVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGL 245
Query: 435 ARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPR 494
A++G +A+E + EMK++G++ F S+L AC +G +N+G + + R + +
Sbjct: 246 AQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACII---RTNFQ 302
Query: 495 AEHY--ACVVDMVGRAGLLIEARSFIERMPVKPDVLVWQALLGACSIHGDSEMGKYAAEK 552
Y + ++DM + L A++ +RM K +V+ W A++ G +E A K
Sbjct: 303 DHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK-NVVSWTAMVVGYGQTGRAE----EAVK 357
Query: 553 LFLAQPDS---PAPYILMANIYSCS 574
+FL S P Y L I +C+
Sbjct: 358 IFLDMQRSGIDPDHYTLGQAISACA 382
Score = 41.6 bits (96), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 97/240 (40%), Gaps = 32/240 (13%)
Query: 392 NPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMK 451
N F N L+ YSK G + + F ++ R+ V+WN +I ++ G A++ Y M
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 452 LE-GVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACV----VDMVG 506
+ T VT +++L S G V+ G + + I E Y V + M
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQV-----IKLGFESYLLVGSPLLYMYA 185
Query: 507 RAGLLIEARSFIERMPVKPDVLVWQALLG---ACSIHGDSEMGKYAAEKLFLAQPDSPAP 563
G + +A+ + + V+ + +L+G AC + D A +LF
Sbjct: 186 NVGCISDAKKVFYGLDDRNTVM-YNSLMGGLLACGMIED-------ALQLFRGMEKDSVS 237
Query: 564 YILMANIYSCSGRWKERAKAIKRMKEMGVDKET-----------GISWIEIEKQVHSFVV 612
+ M + +G KE + + MK G+ + G+ I KQ+H+ ++
Sbjct: 238 WAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACII 297
Score = 36.2 bits (82), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 10/111 (9%)
Query: 378 KQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARH 437
K IH II++ F+ N +++ Y+ + +VF R+ N SWN+++ A+++
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 438 GNGFKALELYEEMK--LEGVEPTD-VTFLSLLHACSHVGLVNKGMEFLKSM 485
G L EM+ E + D VT+ L+ S GLV ++ +M
Sbjct: 86 G-------LISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM 129
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 353 bits (906), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 203/575 (35%), Positives = 318/575 (55%), Gaps = 17/575 (2%)
Query: 89 TVIWNSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLE 148
+ I N+L++ Y K ++ ++ L RD V+WNT++S +N + + R +
Sbjct: 236 SFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYL-REMV 294
Query: 149 LGFYQLDQASFTIILSACDRSELSLVSKMIHCLVYLCG-YEEEVTVGNALITSYFKCGSS 207
L + D+ + + +L AC E+ K +H G +E VG+AL+ Y C
Sbjct: 295 LEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQV 354
Query: 208 SSGRKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMH--LGLINPNSLTYLSSVM 265
SGR+VF M R + W A+I+G QN+ +E L LF+ M GL+ NS T V
Sbjct: 355 LSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLL-ANSTTMAGVVP 413
Query: 266 ACSGLQALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVS 325
AC A IHG + K L D +++ LMDMYS+ G ++ A +IF E+ D V+
Sbjct: 414 ACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVT 473
Query: 326 MTVILVGFAQNGFEEEAMQLFVKM------VKAG---IEIDPNMVS--AVLGVFGVDTSL 374
++ G+ + E+A+ L KM V G + + PN ++ +L ++L
Sbjct: 474 WNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSAL 533
Query: 375 GLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAF 434
GK+IH+ IK++ ++ V + L++MY+KCG L+ S KVF ++ +N ++WN +I A+
Sbjct: 534 AKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAY 593
Query: 435 ARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPR 494
HGNG +A++L M ++GV+P +VTF+S+ ACSH G+V++G+ M + + P
Sbjct: 594 GMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPS 653
Query: 495 AEHYACVVDMVGRAGLLIEARSFIERMPVK-PDVLVWQALLGACSIHGDSEMGKYAAEKL 553
++HYACVVD++GRAG + EA + MP W +LLGA IH + E+G+ AA+ L
Sbjct: 654 SDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNL 713
Query: 554 FLAQPDSPAPYILMANIYSCSGRWKERAKAIKRMKEMGVDKETGISWIEIEKQVHSFVVD 613
+P+ + Y+L+ANIYS +G W + + + MKE GV KE G SWIE +VH FV
Sbjct: 714 IQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAG 773
Query: 614 DKMHPQADTIHGVLAELLRLMIDEGYVPNKRFILH 648
D HPQ++ + G L L M EGYVP+ +LH
Sbjct: 774 DSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLH 808
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 144/553 (26%), Positives = 269/553 (48%), Gaps = 39/553 (7%)
Query: 42 DNYVDISRLLSISAKEGHFHLGPSLHASFIKTFEPFDNQNVYNVPNATVIWNSLLSFYLK 101
DNY LL A LG +HA K Y V + TV N+L++ Y K
Sbjct: 96 DNYA-FPALLKAVADLQDMELGKQIHAHVYKFG--------YGVDSVTVA-NTLVNLYRK 145
Query: 102 CDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFTI 161
C K+FD + R+ VSWN+++S +++M F+ L+ ++ +SFT+
Sbjct: 146 CGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLD---ENVEPSSFTL 202
Query: 162 --ILSACDR---SELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGE 216
+++AC E ++ K +H G E + N L+ Y K G +S + + G
Sbjct: 203 VSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGS 261
Query: 217 MRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEG 276
R+++TW V+S L QN+ E L+ +M L + P+ T S + ACS L+ L G
Sbjct: 262 FGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTG 321
Query: 277 RQIHGILWKL-ALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQ 335
+++H K +L + + SAL+DMY C V ++F+ + ++ G++Q
Sbjct: 322 KELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQ 381
Query: 336 NGFEEEAMQLFVKMVK-AGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPF 394
N ++EA+ LF+ M + AG+ + ++ V+ + + IH ++K + F
Sbjct: 382 NEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRF 441
Query: 395 VNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMK-LE 453
V N L++MYS+ G ++ ++++F +M R+ V+WN+MI + + AL L +M+ LE
Sbjct: 442 VQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLE 501
Query: 454 ----------GVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVD 503
++P +T +++L +C+ + + KG E + + + ++ + +VD
Sbjct: 502 RKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE-IHAYAIKNNLATDVAVGSALVD 560
Query: 504 MVGRAGLLIEARSFIERMPVKPDVLVWQALLGACSIHGDSEMGKYAAE--KLFLAQPDSP 561
M + G L +R +++P K +V+ W ++ A +HG+ G+ A + ++ + Q P
Sbjct: 561 MYAKCGCLQMSRKVFDQIPQK-NVITWNVIIMAYGMHGN---GQEAIDLLRMMMVQGVKP 616
Query: 562 APYILMANIYSCS 574
++ +CS
Sbjct: 617 NEVTFISVFAACS 629
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 152/318 (47%), Gaps = 6/318 (1%)
Query: 225 WTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGILW 284
W ++ V++ L E + +V M + I P++ + + + A + LQ + G+QIH ++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 285 KLALQSD-LCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAM 343
K D + + + L+++Y KCG +++F+ E + VS ++ E A+
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 344 QLFVKMVKAGIEIDP-NMVSAVLGVFGVDTSLGL--GKQIHSLIIKSDFTSNPFVNNGLI 400
+ F M+ +E +VS V + GL GKQ+H+ ++ N F+ N L+
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLV 243
Query: 401 NMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDV 460
MY K G L S + R+ V+WN+++++ ++ +ALE EM LEGVEP +
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303
Query: 461 TFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEARSFIER 520
T S+L ACSH+ ++ G E + + + + +VDM ++ R +
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDG 363
Query: 521 MPVKPDVLVWQALLGACS 538
M + +W A++ S
Sbjct: 364 M-FDRKIGLWNAMIAGYS 380
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 352 bits (903), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 182/543 (33%), Positives = 307/543 (56%), Gaps = 4/543 (0%)
Query: 108 AVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFTIILSACD 167
A ++FDD+P WN ++ G+ RN F + +++L D +F +L AC
Sbjct: 72 ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYS-NMQLARVSPDSFTFPHLLKACS 130
Query: 168 RSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRV--RNVITW 225
+ + +H V+ G++ +V V N LI Y KC S R VF + + R +++W
Sbjct: 131 GLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSW 190
Query: 226 TAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGILWK 285
TA++S QN E L++F +M + P+ + +S + A + LQ L +GR IH + K
Sbjct: 191 TAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVK 250
Query: 286 LALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQL 345
+ L+ + + +L MY+KCG V A +F+ + + + ++ G+A+NG+ EA+ +
Sbjct: 251 MGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDM 310
Query: 346 FVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSK 405
F +M+ + D +++ + SL + ++ + +SD+ + F+++ LI+M++K
Sbjct: 311 FHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAK 370
Query: 406 CGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSL 465
CG +E + VF R R+ V W++MI + HG +A+ LY M+ GV P DVTFL L
Sbjct: 371 CGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGL 430
Query: 466 LHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEARSFIERMPVKP 525
L AC+H G+V +G F M + H+I+P+ +HYACV+D++GRAG L +A I+ MPV+P
Sbjct: 431 LMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQP 489
Query: 526 DVLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDSPAPYILMANIYSCSGRWKERAKAIK 585
V VW ALL AC H E+G+YAA++LF P + Y+ ++N+Y+ + W A+
Sbjct: 490 GVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRV 549
Query: 586 RMKEMGVDKETGISWIEIEKQVHSFVVDDKMHPQADTIHGVLAELLRLMIDEGYVPNKRF 645
RMKE G++K+ G SW+E+ ++ +F V DK HP+ + I + + + + G+V NK
Sbjct: 550 RMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDA 609
Query: 646 ILH 648
LH
Sbjct: 610 SLH 612
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 205/390 (52%), Gaps = 14/390 (3%)
Query: 160 TIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRV 219
++I SA +++L K IH + + G + + LI + G + R+VF ++
Sbjct: 26 SLIDSATHKAQL----KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPR 81
Query: 220 RNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQI 279
+ W A+I G +N +++ L ++ M L ++P+S T+ + ACSGL L GR +
Sbjct: 82 PQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFV 141
Query: 280 HGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEF--AEELDGVSMTVILVGFAQNG 337
H +++L +D+ +++ L+ +Y+KC + A +FE E VS T I+ +AQNG
Sbjct: 142 HAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNG 201
Query: 338 FEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNN 397
EA+++F +M K ++ D + +VL F L G+ IH+ ++K P +
Sbjct: 202 EPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI 261
Query: 398 GLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEP 457
L MY+KCG + + +F +M N + WN+MI+ +A++G +A++++ EM + V P
Sbjct: 262 SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRP 321
Query: 458 TDVTFLSLLHACSHVGLVNKGMEFLKSMTE-VHRISPRAEHY--ACVVDMVGRAGLLIEA 514
++ S + AC+ VG +E +SM E V R R + + + ++DM + G + A
Sbjct: 322 DTISITSAISACAQVG----SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGA 377
Query: 515 RSFIERMPVKPDVLVWQALLGACSIHGDSE 544
R +R + DV+VW A++ +HG +
Sbjct: 378 RLVFDRT-LDRDVVVWSAMIVGYGLHGRAR 406
Score = 142 bits (359), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 209/419 (49%), Gaps = 26/419 (6%)
Query: 50 LLSISAKEGHFHLGPSLHASFIKTFEPFDNQNVYNVPNATVIWNSLLSFYLKCDQMRNAV 109
LL + H +G +HA + FD + N L++ Y KC ++ +A
Sbjct: 125 LLKACSGLSHLQMGRFVHAQVFRL--GFDAD--------VFVQNGLIALYAKCRRLGSAR 174
Query: 110 KLFDDMPM--RDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFTIILSACD 167
+F+ +P+ R VSW +VS + +NGE F + ++ + D + +L+A
Sbjct: 175 TVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDV-KPDWVALVSVLNAFT 233
Query: 168 RSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVITWTA 227
+ + IH V G E E + +L T Y KCG ++ + +F +M+ N+I W A
Sbjct: 234 CLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNA 293
Query: 228 VISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGILWKLA 287
+ISG +N E + +F +M + P++++ S++ AC+ + +L + R ++ + +
Sbjct: 294 MISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSD 353
Query: 288 LQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLFV 347
+ D+ I SAL+DM++KCGSVE A +F+ + D V + ++VG+ +G EA+ L+
Sbjct: 354 YRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYR 413
Query: 348 KMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIK-SDFTSNPFVNN--GLINMYS 404
M + G+ PN V+ LG+ G+ ++ + +D NP + +I++
Sbjct: 414 AMERGGVH--PNDVT-FLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLG 470
Query: 405 KCGDLEDSIKVFSRMAPRNSVS-WNSMIAAFARHGNGFKALEL--YEEMKLEGVEPTDV 460
+ G L+ + +V M + V+ W ++++A +H + +EL Y +L ++P++
Sbjct: 471 RAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH----RHVELGEYAAQQLFSIDPSNT 525
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 348 bits (894), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 201/601 (33%), Positives = 305/601 (50%), Gaps = 12/601 (1%)
Query: 50 LLSISAKEGHFHLGPSLHASFIKTFEPFDNQNVYNVPNATVIWNSLLSFYLKCDQMRNAV 109
LL + LG +HA +KT + P + N L++ Y K D +A
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDS---------PPPPFLANYLINMYSKLDHPESAR 62
Query: 110 KLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFTIILSACDRS 169
+ P R+ VSW +++SG +NG F F G D +F A
Sbjct: 63 LVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPND-FTFPCAFKAVASL 121
Query: 170 ELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVITWTAVI 229
L + K IH L CG +V VG + Y K RK+F E+ RN+ TW A I
Sbjct: 122 RLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFI 181
Query: 230 SGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGILWKLALQ 289
S V + E ++ F++ +PNS+T+ + + ACS L G Q+HG++ +
Sbjct: 182 SNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFD 241
Query: 290 SDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLFVKM 349
+D+ + + L+D Y KC + + IF + VS ++ + QN +E+A L+++
Sbjct: 242 TDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRS 301
Query: 350 VKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDL 409
K +E M+S+VL L LG+ IH+ +K+ FV + L++MY KCG +
Sbjct: 302 RKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCI 361
Query: 410 EDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTD--VTFLSLLH 467
EDS + F M +N V+ NS+I +A G AL L+EEM G PT +TF+SLL
Sbjct: 362 EDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLS 421
Query: 468 ACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEARSFIERMPVKPDV 527
ACS G V GM+ SM + I P AEHY+C+VDM+GRAG++ A FI++MP++P +
Sbjct: 422 ACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTI 481
Query: 528 LVWQALLGACSIHGDSEMGKYAAEKLFLAQPDSPAPYILMANIYSCSGRWKERAKAIKRM 587
VW AL AC +HG ++G AAE LF P ++L++N ++ +GRW E + +
Sbjct: 482 SVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEL 541
Query: 588 KEMGVDKETGISWIEIEKQVHSFVVDDKMHPQADTIHGVLAELLRLMIDEGYVPNKRFIL 647
K +G+ K G SWI ++ QVH+F D+ H I LA+L M GY P+ + L
Sbjct: 542 KGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSL 601
Query: 648 H 648
+
Sbjct: 602 Y 602
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 348 bits (894), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 202/619 (32%), Positives = 332/619 (53%), Gaps = 48/619 (7%)
Query: 66 LHASFIKTFEPFDNQNVYNVPNATVIWNSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNT 125
LHA FI+T Q++ + + VI S Y + A+ LF + ++W +
Sbjct: 27 LHAQFIRT------QSLSHTSASIVI-----SIYTNLKLLHEALLLFKTLKSPPVLAWKS 75
Query: 126 MVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFTIILSACDRSELSLVSKMIHCLVYLC 185
++ F F F G D F +L +C + +H +
Sbjct: 76 VIRCFTDQSLFSKALASFVEMRASGRCP-DHNVFPSVLKSCTMMMDLRFGESVHGFIVRL 134
Query: 186 GYEEEVTVGNALITSYFKC------------------GSSSSG----------------- 210
G + ++ GNAL+ Y K +S+SG
Sbjct: 135 GMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDS 194
Query: 211 -RKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSG 269
R+VF M ++V+++ +I+G Q+ +YE+ L++ +M + P+S T S + S
Sbjct: 195 VRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSE 254
Query: 270 LQALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVI 329
+ +G++IHG + + + SD+ I S+L+DMY+K +ED+ ++F DG+S +
Sbjct: 255 YVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSL 314
Query: 330 LVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDF 389
+ G+ QNG EA++LF +MV A ++ S+V+ +L LGKQ+H +++ F
Sbjct: 315 VAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGF 374
Query: 390 TSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEE 449
SN F+ + L++MYSKCG+++ + K+F RM + VSW ++I A HG+G +A+ L+EE
Sbjct: 375 GSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEE 434
Query: 450 MKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAG 509
MK +GV+P V F+++L ACSHVGLV++ + SMT+V+ ++ EHYA V D++GRAG
Sbjct: 435 MKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAG 494
Query: 510 LLIEARSFIERMPVKPDVLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDSPAPYILMAN 569
L EA +FI +M V+P VW LL +CS+H + E+ + AEK+F ++ Y+LM N
Sbjct: 495 KLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCN 554
Query: 570 IYSCSGRWKERAKAIKRMKEMGVDKETGISWIEIEKQVHSFVVDDKMHPQADTIHGVLAE 629
+Y+ +GRWKE AK RM++ G+ K+ SWIE++ + H FV D+ HP D I+ L
Sbjct: 555 MYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKA 614
Query: 630 LLRLMIDEGYVPNKRFILH 648
++ M EGYV + +LH
Sbjct: 615 VMEQMEKEGYVADTSGVLH 633
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 347 bits (891), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 179/554 (32%), Positives = 310/554 (55%), Gaps = 2/554 (0%)
Query: 90 VIWNSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLEL 149
+ N LL Y + ++ A LF+++P +D+V++NT+++G+ ++G + F + +
Sbjct: 185 TVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQS 244
Query: 150 GFYQLDQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSS 209
G +Q +F+ +L A + + +H L G+ + +VGN ++ Y K
Sbjct: 245 G-HQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLE 303
Query: 210 GRKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSG 269
R +F EM + +++ VIS Q YE L F +M + + + + + +
Sbjct: 304 TRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAAN 363
Query: 270 LQALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVI 329
L +L GRQ+H S L + ++L+DMY+KC E+A IF+ + VS T +
Sbjct: 364 LSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTAL 423
Query: 330 LVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDF 389
+ G+ Q G ++LF KM + + D + + VL SL LGKQ+H+ II+S
Sbjct: 424 ISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGN 483
Query: 390 TSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEE 449
N F +GL++MY+KCG ++D+++VF M RN+VSWN++I+A A +G+G A+ + +
Sbjct: 484 LENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAK 543
Query: 450 MKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAG 509
M G++P V+ L +L ACSH G V +G E+ ++M+ ++ I+P+ +HYAC++D++GR G
Sbjct: 544 MIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNG 603
Query: 510 LLIEARSFIERMPVKPDVLVWQALLGACSIHGDSEMGKYAAEKLF-LAQPDSPAPYILMA 568
EA ++ MP +PD ++W ++L AC IH + + + AAEKLF + + A Y+ M+
Sbjct: 604 RFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMS 663
Query: 569 NIYSCSGRWKERAKAIKRMKEMGVDKETGISWIEIEKQVHSFVVDDKMHPQADTIHGVLA 628
NIY+ +G W++ K M+E G+ K SW+E+ ++H F +D+ HP D I +
Sbjct: 664 NIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKIN 723
Query: 629 ELLRLMIDEGYVPN 642
EL + EGY P+
Sbjct: 724 ELTAEIEREGYKPD 737
Score = 182 bits (461), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 126/483 (26%), Positives = 228/483 (47%), Gaps = 19/483 (3%)
Query: 89 TVIWNSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLE 148
TV N+++S ++K + +A LFD MP R V+W ++ + RN FD F F++
Sbjct: 79 TVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCR 138
Query: 149 LGFYQL-DQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEE--VTVGNALITSYFKCG 205
L D +FT +L C+ + +H G++ +TV N L+ SY +
Sbjct: 139 SSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVR 198
Query: 206 SSSSGRKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVM 265
+F E+ ++ +T+ +I+G ++ LY E + LF+KM P+ T+ +
Sbjct: 199 RLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLK 258
Query: 266 ACSGLQALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVS 325
A GL G+Q+H + D + + ++D YSK V + +F+ ELD VS
Sbjct: 259 AVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVS 318
Query: 326 MTVILVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLII 385
V++ ++Q E ++ F +M G + + +L + +SL +G+Q+H +
Sbjct: 319 YNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL 378
Query: 386 KSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALE 445
+ S V N L++MY+KC E++ +F + R +VSW ++I+ + + G L+
Sbjct: 379 LATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLK 438
Query: 446 LYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACV---- 501
L+ +M+ + TF ++L A + + G ++H R+ + V
Sbjct: 439 LFTKMRGSNLRADQSTFATVLKASASFASLLLG-------KQLHAFIIRSGNLENVFSGS 491
Query: 502 --VDMVGRAGLLIEARSFIERMPVKPDVLVWQALLGACSIHGDSEMGKYAAEKLFLA--Q 557
VDM + G + +A E MP + + + W AL+ A + +GD E A K+ + Q
Sbjct: 492 GLVDMYAKCGSIKDAVQVFEEMPDR-NAVSWNALISAHADNGDGEAAIGAFAKMIESGLQ 550
Query: 558 PDS 560
PDS
Sbjct: 551 PDS 553
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/403 (21%), Positives = 178/403 (44%), Gaps = 49/403 (12%)
Query: 173 LVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRN----------- 221
L ++ + + G++ + N ++ + G S+ RKV+ EM +N
Sbjct: 30 LDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGH 89
Query: 222 --------------------VITWTAVISGLVQNQLYEEGLKLFVKM--HLGLINPNSLT 259
V+TWT ++ +N ++E KLF +M P+ +T
Sbjct: 90 VKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVT 149
Query: 260 YLSSVMACSGLQALCEGRQIHGILWKLALQSD--LCIESALMDMYSKCGSVEDAWQIFEF 317
+ + + C+ Q+H KL ++ L + + L+ Y + ++ A +FE
Sbjct: 150 FTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEE 209
Query: 318 AEELDGVSMTVILVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVL-GVFGVDTSLGL 376
E D V+ ++ G+ ++G E++ LF+KM ++G + S VL V G+ L
Sbjct: 210 IPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLH-DFAL 268
Query: 377 GKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFAR 436
G+Q+H+L + + F+ + V N +++ YSK + ++ +F M + VS+N +I+++++
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQ 328
Query: 437 HGNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGME-----FLKSMTEVHRI 491
+L + EM+ G + + F ++L +++ + G + L + + +
Sbjct: 329 ADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHV 388
Query: 492 SPRAEHYACVVDMVGRAGLLIEARSFIERMPVKPDVLVWQALL 534
+VDM + + EA + +P + V W AL+
Sbjct: 389 G------NSLVDMYAKCEMFEEAELIFKSLPQRTTV-SWTALI 424
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 347 bits (889), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 198/601 (32%), Positives = 326/601 (54%), Gaps = 12/601 (1%)
Query: 50 LLSISAKEGHFHLGPSLHASFIKTFEPFDNQNVYNVPNATVIWNSLLSFYLKCDQMRNAV 109
+L + A+E LG +H +K D + V N N+L+ Y KC + NA
Sbjct: 298 VLPVCAREREIGLGKGVHGWAVKL--RLDKELVLN--------NALMDMYSKCGCITNAQ 347
Query: 110 KLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGF-YQLDQASFTIILSACDR 168
+F ++ VSWNTMV GF G+ F ++ L G + D+ + + C
Sbjct: 348 MIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 407
Query: 169 SELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVITWTAV 228
K +HC + V NA + SY KCGS S ++VF +R + V +W A+
Sbjct: 408 ESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNAL 467
Query: 229 ISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGILWKLAL 288
I G Q+ L ++M + + P+S T S + ACS L++L G+++HG + + L
Sbjct: 468 IGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWL 527
Query: 289 QSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLFVK 348
+ DL + +++ +Y CG + +F+ E+ VS ++ G+ QNGF + A+ +F +
Sbjct: 528 ERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQ 587
Query: 349 MVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGD 408
MV GI++ + V G + SL LG++ H+ +K + F+ LI+MY+K G
Sbjct: 588 MVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGS 647
Query: 409 LEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHA 468
+ S KVF+ + +++ SWN+MI + HG +A++L+EEM+ G P D+TFL +L A
Sbjct: 648 ITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTA 707
Query: 469 CSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEA-RSFIERMPVKPDV 527
C+H GL+++G+ +L M + P +HYACV+DM+GRAG L +A R E M + DV
Sbjct: 708 CNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADV 767
Query: 528 LVWQALLGACSIHGDSEMGKYAAEKLFLAQPDSPAPYILMANIYSCSGRWKERAKAIKRM 587
+W++LL +C IH + EMG+ A KLF +P+ P Y+L++N+Y+ G+W++ K +RM
Sbjct: 768 GIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRM 827
Query: 588 KEMGVDKETGISWIEIEKQVHSFVVDDKMHPQADTIHGVLAELLRLMIDEGYVPNKRFIL 647
EM + K+ G SWIE+ ++V SFVV ++ + I + + L + GY P+ +
Sbjct: 828 NEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQ 887
Query: 648 H 648
H
Sbjct: 888 H 888
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/483 (26%), Positives = 219/483 (45%), Gaps = 20/483 (4%)
Query: 7 FLKLNSNFPFCSSLVSPFIT--KIIQDPTSSTSKLVLDNYVDISRLLSISAKEGHFHLGP 64
FL+ SNF L F T + + D SS+ +L + LL S K +G
Sbjct: 46 FLRRISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREA-LGLLLQASGKRKDIEMGR 104
Query: 65 SLHASFIKTFEPFDNQNVYNVPNATVIWNSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWN 124
+H + N V+ +++ Y C ++ +FD + ++ WN
Sbjct: 105 KIHQLV---------SGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWN 155
Query: 125 TMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFTIILSACDRSELSLVSKMIHCLVYL 184
++S + RN +D F + D ++ ++ AC + +H LV
Sbjct: 156 AVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVK 215
Query: 185 CGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKL 244
G E+V VGNAL++ Y G + ++F M RN+++W ++I N EE L
Sbjct: 216 TGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLL 275
Query: 245 FVKMHL----GLINPNSLTYLSSVMACSGLQALCEGRQIHGILWKLALQSDLCIESALMD 300
+M G P+ T ++ + C+ + + G+ +HG KL L +L + +ALMD
Sbjct: 276 LGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMD 335
Query: 301 MYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLFVKMVKAGIEIDPNM 360
MYSKCG + +A IF+ + VS ++ GF+ G + +M+ G ++ +
Sbjct: 336 MYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADE 395
Query: 361 VSAVLGVFGV---DTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIKVFS 417
V+ +L V ++ L K++H +K +F N V N + Y+KCG L + +VF
Sbjct: 396 VT-ILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFH 454
Query: 418 RMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHVGLVNK 477
+ + SWN++I A+ + +L+ + +MK+ G+ P T SLL ACS + +
Sbjct: 455 GIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRL 514
Query: 478 GME 480
G E
Sbjct: 515 GKE 517
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 184/383 (48%), Gaps = 20/383 (5%)
Query: 127 VSGFLRNGEFDMGFGFFKR------SLELGFYQLDQASFTIILSACDRSELSLVSKMIHC 180
+S F G+ D F + S F + +A ++ ++ R ++ + K+
Sbjct: 50 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQL 109
Query: 181 LVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVITWTAVISGLVQNQLYEE 240
+ + + +IT Y CGS R VF +R +N+ W AVIS +N+LY+E
Sbjct: 110 VSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDE 169
Query: 241 GLKLFVKM-HLGLINPNSLTYLSSVMACSGLQALCEGRQIHGILWKLALQSDLCIESALM 299
L+ F++M + P+ TY + AC+G+ + G +HG++ K L D+ + +AL+
Sbjct: 170 VLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALV 229
Query: 300 DMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLFVKMVK----AGIE 355
Y G V DA Q+F+ E + VS ++ F+ NGF EE+ L +M++
Sbjct: 230 SFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFM 289
Query: 356 IDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIKV 415
D + VL V + +GLGK +H +K +NN L++MYSKCG + ++ +
Sbjct: 290 PDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMI 349
Query: 416 FSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKL--EGVEPTDVTFLSLLHACSHVG 473
F +N VSWN+M+ F+ G+ ++ +M E V+ +VT L+ + C H
Sbjct: 350 FKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH-- 407
Query: 474 LVNKGMEFLKSMTEVHRISPRAE 496
FL S+ E+H S + E
Sbjct: 408 -----ESFLPSLKELHCYSLKQE 425
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/456 (24%), Positives = 213/456 (46%), Gaps = 7/456 (1%)
Query: 91 IWNSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLEL- 149
+ N+L+SFY + +A++LFD MP R+ VSWN+M+ F NG + F +E
Sbjct: 224 VGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEEN 283
Query: 150 --GFYQLDQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSS 207
G + D A+ +L C R + K +H ++E+ + NAL+ Y KCG
Sbjct: 284 GDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCI 343
Query: 208 SSGRKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLG--LINPNSLTYLSSVM 265
++ + +F +NV++W ++ G + +M G + + +T L++V
Sbjct: 344 TNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVP 403
Query: 266 ACSGLQALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVS 325
C L +++H K + + +A + Y+KCGS+ A ++F S
Sbjct: 404 VCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNS 463
Query: 326 MTVILVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLII 385
++ G AQ+ ++ ++M +G+ D V ++L SL LGK++H II
Sbjct: 464 WNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFII 523
Query: 386 KSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALE 445
++ + FV ++++Y CG+L +F M ++ VSWN++I + ++G +AL
Sbjct: 524 RNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALG 583
Query: 446 LYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMV 505
++ +M L G++ ++ + + ACS + + G E + H + A ++DM
Sbjct: 584 VFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGRE-AHAYALKHLLEDDAFIACSLIDMY 642
Query: 506 GRAGLLIEARSFIERMPVKPDVLVWQALLGACSIHG 541
+ G + ++ + K W A++ IHG
Sbjct: 643 AKNGSITQSSKVFNGLKEKSTA-SWNAMIMGYGIHG 677
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 347 bits (889), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 192/553 (34%), Positives = 311/553 (56%), Gaps = 8/553 (1%)
Query: 95 LLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQL 154
L++ YLK + +A ++FD+M +RD+VS+NTM+ G+L+ + F +L+ ++
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ--FKP 305
Query: 155 DQASFTIILSACDR-SELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKV 213
D + + +L AC +LSL +K I+ + G+ E TV N LI Y KCG + R V
Sbjct: 306 DLLTVSSVLRACGHLRDLSL-AKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDV 364
Query: 214 FGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQAL 273
F M ++ ++W ++ISG +Q+ E +KLF M + + +TYL + + L L
Sbjct: 365 FNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADL 424
Query: 274 CEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGF 333
G+ +H K + DL + +AL+DMY+KCG V D+ +IF D V+ ++
Sbjct: 425 KFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISAC 484
Query: 334 AQNGFEEEAMQLFVKMVKAGIEIDPNMVS--AVLGVFGVDTSLGLGKQIHSLIIKSDFTS 391
+ G +Q+ +M K+ E+ P+M + L + + LGK+IH +++ + S
Sbjct: 485 VRFGDFATGLQVTTQMRKS--EVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYES 542
Query: 392 NPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMK 451
+ N LI MYSKCG LE+S +VF RM+ R+ V+W MI A+ +G G KALE + +M+
Sbjct: 543 ELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADME 602
Query: 452 LEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGLL 511
G+ P V F+++++ACSH GLV++G+ + M ++I P EHYACVVD++ R+ +
Sbjct: 603 KSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKI 662
Query: 512 IEARSFIERMPVKPDVLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDSPAPYILMANIY 571
+A FI+ MP+KPD +W ++L AC GD E + + ++ PD P IL +N Y
Sbjct: 663 SKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAY 722
Query: 572 SCSGRWKERAKAIKRMKEMGVDKETGISWIEIEKQVHSFVVDDKMHPQADTIHGVLAELL 631
+ +W + + K +K+ + K G SWIE+ K VH F D PQ++ I+ L L
Sbjct: 723 AALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILY 782
Query: 632 RLMIDEGYVPNKR 644
LM EGY+P+ R
Sbjct: 783 SLMAKEGYIPDPR 795
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 144/494 (29%), Positives = 251/494 (50%), Gaps = 25/494 (5%)
Query: 91 IWNSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELG 150
+ N+L+ Y + + A ++FD+MP+RD VSWN+++SG+ + G+++ +LE+
Sbjct: 143 VGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSH-------GYYEEALEI- 194
Query: 151 FYQLDQA-----SFTI--ILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFK 203
+++L + SFT+ +L A + + +H G V V N L+ Y K
Sbjct: 195 YHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLK 254
Query: 204 CGSSSSGRKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSS 263
+ R+VF EM VR+ +++ +I G ++ ++ EE +++F++ +L P+ LT S
Sbjct: 255 FRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSV 313
Query: 264 VMACSGLQALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDG 323
+ AC L+ L + I+ + K + + + L+D+Y+KCG + A +F E D
Sbjct: 314 LRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDT 373
Query: 324 VSMTVILVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSL 383
VS I+ G+ Q+G EAM+LF M+ + D ++ V L GK +HS
Sbjct: 374 VSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSN 433
Query: 384 IIKSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKA 443
IKS + V+N LI+MY+KCG++ DS+K+FS M ++V+WN++I+A R G+
Sbjct: 434 GIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATG 493
Query: 444 LELYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVD 503
L++ +M+ V P TFL L C+ + G E + S A +++
Sbjct: 494 LQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNA-LIE 552
Query: 504 MVGRAGLLIEARSFIERMPVKPDVLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDS--- 560
M + G L + ERM + DV+ W ++ A ++G+ E A + F S
Sbjct: 553 MYSKCGCLENSSRVFERMS-RRDVVTWTGMIYAYGMYGEGE----KALETFADMEKSGIV 607
Query: 561 PAPYILMANIYSCS 574
P + +A IY+CS
Sbjct: 608 PDSVVFIAIIYACS 621
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 224/433 (51%), Gaps = 8/433 (1%)
Query: 116 PMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFTIILSACDRSELSLVS 175
P ++ WN+++ F +NG F F+ + L D+ +F ++ AC + +
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGK-LRESKVSPDKYTFPSVIKACAGLFDAEMG 125
Query: 176 KMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVITWTAVISGLVQN 235
+++ + G+E ++ VGNAL+ Y + G + R+VF EM VR++++W ++ISG +
Sbjct: 126 DLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSH 185
Query: 236 QLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGILWKLALQSDLCIE 295
YEE L+++ ++ I P+S T S + A L + +G+ +HG K + S + +
Sbjct: 186 GYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVN 245
Query: 296 SALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLFVKMVKAGIE 355
+ L+ MY K DA ++F+ + D VS ++ G+ + EE++++F++ + +
Sbjct: 246 NGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD---Q 302
Query: 356 IDPNM--VSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSI 413
P++ VS+VL G L L K I++ ++K+ F V N LI++Y+KCGD+ +
Sbjct: 303 FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITAR 362
Query: 414 KVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHVG 473
VF+ M +++VSWNS+I+ + + G+ +A++L++ M + + +T+L L+ + +
Sbjct: 363 DVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLA 422
Query: 474 LVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEARSFIERMPVKPDVLVWQAL 533
+ G + L S I ++DM + G + ++ M D + W +
Sbjct: 423 DLKFG-KGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTG-DTVTWNTV 480
Query: 534 LGACSIHGDSEMG 546
+ AC GD G
Sbjct: 481 ISACVRFGDFATG 493
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 182/374 (48%), Gaps = 16/374 (4%)
Query: 176 KMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMR-VRNVITWTAVISGLVQ 234
+ IH LV G + LI Y +S VF + +NV W ++I +
Sbjct: 24 RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSK 83
Query: 235 NQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGILWKLALQSDLCI 294
N L+ E L+ + K+ ++P+ T+ S + AC+GL G ++ + + +SDL +
Sbjct: 84 NGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFV 143
Query: 295 ESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLFVKMVKAGI 354
+AL+DMYS+ G + A Q+F+ D VS ++ G++ +G+ EEA++++ ++ + I
Sbjct: 144 GNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWI 203
Query: 355 EIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIK 414
D VS+VL FG + G+ +H +KS S VNNGL+ MY K D+ +
Sbjct: 204 VPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARR 263
Query: 415 VFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEE---MKLEGVE---PTDVTFLSLLHA 468
VF M R+SVS+N+MI G+ LE+ EE M LE ++ P +T S+L A
Sbjct: 264 VFDEMDVRDSVSYNTMIC-------GYLKLEMVEESVRMFLENLDQFKPDLLTVSSVLRA 316
Query: 469 CSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEARSFIERMPVKPDVL 528
C H+ ++ M + + ++D+ + G +I AR M K D +
Sbjct: 317 CGHLRDLSLAKYIYNYMLKAGFVLESTVR-NILIDVYAKCGDMITARDVFNSMECK-DTV 374
Query: 529 VWQALLGACSIHGD 542
W +++ GD
Sbjct: 375 SWNSIISGYIQSGD 388
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 113/227 (49%), Gaps = 11/227 (4%)
Query: 50 LLSISAKEGHFHLGPSLHASFIKTFEPFDNQNVYNVPNATVIWNSLLSFYLKCDQMRNAV 109
L+S+S + G LH++ IK+ D + N+L+ Y KC ++ +++
Sbjct: 414 LISVSTRLADLKFGKGLHSNGIKSGICID----------LSVSNALIDMYAKCGEVGDSL 463
Query: 110 KLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFTIILSACDRS 169
K+F M DTV+WNT++S +R G+F G + + D A+F + L C
Sbjct: 464 KIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQ-MRKSEVVPDMATFLVTLPMCASL 522
Query: 170 ELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVITWTAVI 229
+ K IHC + GYE E+ +GNALI Y KCG + +VF M R+V+TWT +I
Sbjct: 523 AAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMI 582
Query: 230 SGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEG 276
E+ L+ F M I P+S+ +++ + ACS + EG
Sbjct: 583 YAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEG 629
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 112/218 (51%), Gaps = 9/218 (4%)
Query: 266 ACSGLQALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVS 325
A S L E R+IH ++ L L S L+D YS + +F V
Sbjct: 13 ALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVY 72
Query: 326 M-TVILVGFAQNGFEEEAMQLFVKMVKAGIEID----PNMVSAVLGVFGVDTSLGLGKQI 380
+ I+ F++NG EA++ + K+ ++ + D P+++ A G+F + +G +
Sbjct: 73 LWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAE----MGDLV 128
Query: 381 HSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNG 440
+ I+ F S+ FV N L++MYS+ G L + +VF M R+ VSWNS+I+ ++ HG
Sbjct: 129 YEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYY 188
Query: 441 FKALELYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKG 478
+ALE+Y E+K + P T S+L A ++ +V +G
Sbjct: 189 EEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQG 226
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 347 bits (889), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 200/608 (32%), Positives = 322/608 (52%), Gaps = 14/608 (2%)
Query: 39 LVLDNYVDISRLLSISAKEGHFHLGPSLHASFIKTFEPFDNQNVYNVPNATVIWNSLLSF 98
LV D + ++ A LG LHA IK + + N+L++
Sbjct: 164 LVPDQFA-FGSIIKACASSSDVGLGKQLHAQVIK----------LESSSHLIAQNALIAM 212
Query: 99 YLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNG-EFDMGFGFFKRSLELGFYQLDQA 157
Y++ +QM +A ++F +PM+D +SW+++++GF + G EF+ K L G + ++
Sbjct: 213 YVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFE-ALSHLKEMLSFGVFHPNEY 271
Query: 158 SFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEM 217
F L AC IH L G +L Y +CG +S R+VF ++
Sbjct: 272 IFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQI 331
Query: 218 RVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGR 277
+ +W +I+GL N +E + +F +M P++++ S + A + AL +G
Sbjct: 332 ERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGM 391
Query: 278 QIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFE-FAEELDGVSMTVILVGFAQN 336
QIH + K +DL + ++L+ MY+ C + + +FE F D VS IL Q+
Sbjct: 392 QIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQH 451
Query: 337 GFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVN 396
E ++LF M+ + E D + +L +SL LG Q+H +K+ F+
Sbjct: 452 EQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIK 511
Query: 397 NGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVE 456
NGLI+MY+KCG L + ++F M R+ VSW+++I +A+ G G +AL L++EMK G+E
Sbjct: 512 NGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIE 571
Query: 457 PTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEARS 516
P VTF+ +L ACSHVGLV +G++ +M H ISP EH +CVVD++ RAG L EA
Sbjct: 572 PNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAER 631
Query: 517 FIERMPVKPDVLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDSPAPYILMANIYSCSGR 576
FI+ M ++PDV+VW+ LL AC G+ + + AAE + P + ++L+ ++++ SG
Sbjct: 632 FIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGN 691
Query: 577 WKERAKAIKRMKEMGVDKETGISWIEIEKQVHSFVVDDKMHPQADTIHGVLAELLRLMID 636
W+ A MK+ V K G SWIEIE ++H F +D HP+ D I+ VL + M+D
Sbjct: 692 WENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQMLD 751
Query: 637 EGYVPNKR 644
E +K+
Sbjct: 752 ECNPQHKK 759
Score = 205 bits (521), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 135/453 (29%), Positives = 227/453 (50%), Gaps = 5/453 (1%)
Query: 84 NVPNATVIWNSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFF 143
N T++ N +LS Y KC +R+A ++FD MP R+ VS+ ++++G+ +NG+ +
Sbjct: 97 NCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLY 156
Query: 144 KRSLELGFYQLDQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFK 203
+ L+ DQ +F I+ AC S + K +H V + NALI Y +
Sbjct: 157 LKMLQEDLVP-DQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVR 215
Query: 204 CGSSSSGRKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKM-HLGLINPNSLTYLS 262
S +VF + ++++I+W+++I+G Q E L +M G+ +PN + S
Sbjct: 216 FNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGS 275
Query: 263 SVMACSGLQALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELD 322
S+ ACS L G QIHG+ K L + +L DMY++CG + A ++F+ E D
Sbjct: 276 SLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPD 335
Query: 323 GVSMTVILVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHS 382
S VI+ G A NG+ +EA+ +F +M +G D + ++L +L G QIHS
Sbjct: 336 TASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHS 395
Query: 383 LIIKSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPR-NSVSWNSMIAAFARHGNGF 441
IIK F ++ V N L+ MY+ C DL +F +SVSWN+++ A +H
Sbjct: 396 YIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPV 455
Query: 442 KALELYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACV 501
+ L L++ M + EP +T +LL C + + G + + + ++P +
Sbjct: 456 EMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQ-VHCYSLKTGLAPEQFIKNGL 514
Query: 502 VDMVGRAGLLIEARSFIERMPVKPDVLVWQALL 534
+DM + G L +AR + M + DV+ W L+
Sbjct: 515 IDMYAKCGSLGQARRIFDSMDNR-DVVSWSTLI 546
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 178/348 (51%), Gaps = 10/348 (2%)
Query: 142 FFKRSLELGFYQLDQASFTI-------ILSACDRSELSLVSKMIHCLVYLCGYEEEVTVG 194
F++ +LE + +SF I ++ AC S + IH + + + +
Sbjct: 46 FYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILN 105
Query: 195 NALITSYFKCGSSSSGRKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLIN 254
N +++ Y KCGS R+VF M RN++++T+VI+G QN E ++L++KM +
Sbjct: 106 NHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLV 165
Query: 255 PNSLTYLSSVMACSGLQALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQI 314
P+ + S + AC+ + G+Q+H + KL S L ++AL+ MY + + DA ++
Sbjct: 166 PDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRV 225
Query: 315 FEFAEELDGVSMTVILVGFAQNGFEEEAMQLFVKMVKAGIEIDPN--MVSAVLGVFGVDT 372
F D +S + I+ GF+Q GFE EA+ +M+ G+ PN + + L
Sbjct: 226 FYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGV-FHPNEYIFGSSLKACSSLL 284
Query: 373 SLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIA 432
G QIH L IKS+ N L +MY++CG L + +VF ++ ++ SWN +IA
Sbjct: 285 RPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIA 344
Query: 433 AFARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGME 480
A +G +A+ ++ +M+ G P ++ SLL A + +++GM+
Sbjct: 345 GLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQ 392
Score = 153 bits (387), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 171/326 (52%), Gaps = 26/326 (7%)
Query: 229 ISGLVQNQLYEEGLKLFVKMHLGLINPNS------LTYLSSVMACSGLQALCEGRQIHGI 282
I+ L ++ Y E L+ F NS TY+S + ACS ++L +GR+IH
Sbjct: 38 INSLCKSNFYREALEAF-----DFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDH 92
Query: 283 LWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEA 342
+ + D + + ++ MY KCGS+ DA ++F+F E + VS T ++ G++QNG EA
Sbjct: 93 ILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEA 152
Query: 343 MQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINM 402
++L++KM++ + D +++ + +GLGKQ+H+ +IK + +S+ N LI M
Sbjct: 153 IRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAM 212
Query: 403 YSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGV-EPTDVT 461
Y + + D+ +VF + ++ +SW+S+IA F++ G F+AL +EM GV P +
Sbjct: 213 YVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYI 272
Query: 462 FLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVV------DMVGRAGLLIEAR 515
F S L ACS + + G +++H + ++E + DM R G L AR
Sbjct: 273 FGSSLKACSSLLRPDYG-------SQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSAR 325
Query: 516 SFIERMPVKPDVLVWQALLGACSIHG 541
+++ +PD W ++ + +G
Sbjct: 326 RVFDQIE-RPDTASWNVIIAGLANNG 350
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 345 bits (886), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 210/633 (33%), Positives = 329/633 (51%), Gaps = 86/633 (13%)
Query: 93 NSLLSFYLKCDQMRNAVKLFDDMP--MRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELG 150
+++S Y + A +F+ P MRDTV +N M++GF N + F + G
Sbjct: 84 TTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEG 143
Query: 151 FYQLDQASFTIILSACDRSELSLVSK------MIHCLVYLCGYEEEVTVGNALITSYFKC 204
F + D +F +L+ L+LV+ H G +V NAL++ Y KC
Sbjct: 144 F-KPDNFTFASVLAG-----LALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKC 197
Query: 205 GSSSS----GRKVFGEMRVRNVITWT--------------------------------AV 228
SS S RKVF E+ ++ +WT A+
Sbjct: 198 ASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAM 257
Query: 229 ISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGILWKLAL 288
ISG V Y+E L++ +M I + TY S + AC+ L G+Q+H + +
Sbjct: 258 ISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLR--- 314
Query: 289 QSDLCI--ESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGF------------- 333
+ D +++L+ +Y KCG ++A IFE D VS +L G+
Sbjct: 315 REDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIF 374
Query: 334 ------------------AQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLG 375
A+NGF EE ++LF M + G E S + V +
Sbjct: 375 KEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYC 434
Query: 376 LGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFA 435
G+Q H+ ++K F S+ N LI MY+KCG +E++ +VF M +SVSWN++IAA
Sbjct: 435 NGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALG 494
Query: 436 RHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRA 495
+HG+G +A+++YEEM +G+ P +T L++L ACSH GLV++G ++ SM V+RI P A
Sbjct: 495 QHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGA 554
Query: 496 EHYACVVDMVGRAGLLIEARSFIERMPVKPDVLVWQALLGACSIHGDSEMGKYAAEKLFL 555
+HYA ++D++ R+G +A S IE +P KP +W+ALL C +HG+ E+G AA+KLF
Sbjct: 555 DHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFG 614
Query: 556 AQPDSPAPYILMANIYSCSGRWKERAKAIKRMKEMGVDKETGISWIEIEKQVHSFVVDDK 615
P+ Y+L++N+++ +G+W+E A+ K M++ GV KE SWIE+E QVH+F+VDD
Sbjct: 615 LIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDT 674
Query: 616 MHPQADTIHGVLAELLRLMIDEGYVPNKRFILH 648
HP+A+ ++ L +L + M GYVP+ F+LH
Sbjct: 675 SHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLH 707
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 124/455 (27%), Positives = 211/455 (46%), Gaps = 78/455 (17%)
Query: 89 TVIWNSLLSFYLKCDQ----MRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMG----- 139
T + N+L+S Y KC + +A K+FD++ +D SW TM++G+++NG FD+G
Sbjct: 184 TSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLE 243
Query: 140 --------------------FGFFKRSLEL------GFYQLDQASFTIILSACDRSELSL 173
GF++ +LE+ +LD+ ++ ++ AC + L
Sbjct: 244 GMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQ 303
Query: 174 VSKMIHCLV------------------YLCGYEEEVTV------------GNALITSYFK 203
+ K +H V Y CG +E NAL++ Y
Sbjct: 304 LGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVS 363
Query: 204 CGSSSSGRKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSS 263
G + +F EM+ +N+++W +ISGL +N EEGLKLF M P + +
Sbjct: 364 SGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGA 423
Query: 264 VMACSGLQALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDG 323
+ +C+ L A C G+Q H L K+ S L +AL+ MY+KCG VE+A Q+F LD
Sbjct: 424 IKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDS 483
Query: 324 VSMTVILVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSL 383
VS ++ Q+G EA+ ++ +M+K GI P+ ++ +L V + GL Q
Sbjct: 484 VSWNALIAALGQHGHGAEAVDVYEEMLKKGIR--PDRIT-LLTVLTACSHAGLVDQGRKY 540
Query: 384 I--IKSDFTSNPFVNN--GLINMYSKCGDLEDSIKVFSRMAPRNSVS-WNSMIAAFARHG 438
+++ + P ++ LI++ + G D+ V + + + W ++++ HG
Sbjct: 541 FDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHG 600
Query: 439 NGFKALELYEEMKLEGVEPT-DVTF--LSLLHACS 470
N L + KL G+ P D T+ LS +HA +
Sbjct: 601 N--MELGIIAADKLFGLIPEHDGTYMLLSNMHAAT 633
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 148/360 (41%), Gaps = 85/360 (23%)
Query: 252 LINPNSLTYLSSVMACSGLQ--ALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVE 309
L+ + Y +++ C L+ +L R +HG + Q I + L+D+Y K +
Sbjct: 7 LVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELN 66
Query: 310 DAWQIFEFAEELDGVSMTVILVGFAQNG--------FEE--------------------- 340
A Q+F+ E D ++ T ++ G+ +G FE+
Sbjct: 67 YARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHN 126
Query: 341 ----EAMQLFVKMVKAGIEIDPNMVSAVL-GVFGVDTSLGLGKQIHSLIIKSDFTSNPFV 395
A+ LF KM G + D ++VL G+ V Q H+ +KS V
Sbjct: 127 NDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSV 186
Query: 396 NNGLINMYSKCGD----LEDSIKVFSRMAPRNSVSWNSMIAAFARHG------------- 438
+N L+++YSKC L + KVF + ++ SW +M+ + ++G
Sbjct: 187 SNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMD 246
Query: 439 -----------------NGF--KALELYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGM 479
GF +ALE+ M G+E + T+ S++ AC+ GL+ G
Sbjct: 247 DNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLG- 305
Query: 480 EFLKSMTEVHRISPRAEHYA-----CVVDMVGRAGLLIEARSFIERMPVKPDVLVWQALL 534
+VH R E ++ +V + + G EAR+ E+MP K D++ W ALL
Sbjct: 306 ------KQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALL 358
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/326 (20%), Positives = 133/326 (40%), Gaps = 80/326 (24%)
Query: 354 IEIDPNMVSAVLGVFGVD---------TSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYS 404
++ +P++V A+ + + TSL L + +H II F + N LI++Y
Sbjct: 1 MQPNPDLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYC 60
Query: 405 KCGDLEDSIKVFSRM------------------------------AP---RNSVSWNSMI 431
K +L + ++F + AP R++V +N+MI
Sbjct: 61 KSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMI 120
Query: 432 AAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACS------------HVGLVNKGM 479
F+ + +G+ A+ L+ +MK EG +P + TF S+L + H + G
Sbjct: 121 TGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGA 180
Query: 480 EFLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEARSFIERMPVKPDVLVWQALLGACSI 539
++ S++ + + + C LL AR + + ++ D W ++
Sbjct: 181 GYITSVSN----ALVSVYSKC----ASSPSLLHSARKVFDEI-LEKDERSWTTMMTGYVK 231
Query: 540 HGDSEMGKYAAEKLFLAQPDSP--APYILMANIYSCSGRWKERAKAIKRMKEMGVDKE-- 595
+G ++G E+L D+ Y M + Y G ++E + ++RM G++ +
Sbjct: 232 NGYFDLG----EELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEF 287
Query: 596 ---------TGISWIEIEKQVHSFVV 612
+++ KQVH++V+
Sbjct: 288 TYPSVIRACATAGLLQLGKQVHAYVL 313
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 341 bits (875), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 191/559 (34%), Positives = 297/559 (53%), Gaps = 3/559 (0%)
Query: 90 VIWNSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLEL 149
++ ++++ Y K ++ +A K+FD MP +DT+ WNTM+SG+ +N + F+ +
Sbjct: 155 LLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINE 214
Query: 150 GFYQLDQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSS 209
+LD + IL A + + IH L G V I+ Y KCG
Sbjct: 215 SCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKM 274
Query: 210 GRKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSG 269
G +F E R +++ + A+I G N E L LF ++ L S T L S++ SG
Sbjct: 275 GSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSST-LVSLVPVSG 333
Query: 270 LQALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVI 329
L IHG K S + +AL +YSK +E A ++F+ + E S +
Sbjct: 334 HLMLIYA--IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAM 391
Query: 330 LVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDF 389
+ G+ QNG E+A+ LF +M K+ +P ++ +L +L LGK +H L+ +DF
Sbjct: 392 ISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDF 451
Query: 390 TSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEE 449
S+ +V+ LI MY+KCG + ++ ++F M +N V+WN+MI+ + HG G +AL ++ E
Sbjct: 452 ESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYE 511
Query: 450 MKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAG 509
M G+ PT VTFL +L+ACSH GLV +G E SM + P +HYAC+VD++GRAG
Sbjct: 512 MLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAG 571
Query: 510 LLIEARSFIERMPVKPDVLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDSPAPYILMAN 569
L A FIE M ++P VW+ LLGAC IH D+ + + +EKLF PD+ ++L++N
Sbjct: 572 HLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSN 631
Query: 570 IYSCSGRWKERAKAIKRMKEMGVDKETGISWIEIEKQVHSFVVDDKMHPQADTIHGVLAE 629
I+S + + A + K+ + K G + IEI + H F D+ HPQ I+ L +
Sbjct: 632 IHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEK 691
Query: 630 LLRLMIDEGYVPNKRFILH 648
L M + GY P LH
Sbjct: 692 LEGKMREAGYQPETELALH 710
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 117/475 (24%), Positives = 219/475 (46%), Gaps = 21/475 (4%)
Query: 108 AVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFTIILSACD 167
A +F + D +N ++ GF N F + + + +++ +SA
Sbjct: 71 ARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAAS 130
Query: 168 RSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVITWTA 227
++IH + G + E+ +G+ ++ YFK RKVF M ++ I W
Sbjct: 131 GFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNT 190
Query: 228 VISGLVQNQLYEEGLKLFVKMHLGLINP-----NSLTYLSSVMACSGLQALCEGRQIHGI 282
+ISG +N++Y E +++F LIN ++ T L + A + LQ L G QIH +
Sbjct: 191 MISGYRKNEMYVESIQVFRD----LINESCTRLDTTTLLDILPAVAELQELRLGMQIHSL 246
Query: 283 LWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEA 342
K S + + + +YSKCG ++ +F + D V+ ++ G+ NG E +
Sbjct: 247 ATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELS 306
Query: 343 MQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINM 402
+ LF +++ +G + + + +++ V G L L IH +KS+F S+ V+ L +
Sbjct: 307 LSLFKELMLSGARLRSSTLVSLVPVSG---HLMLIYAIHGYCLKSNFLSHASVSTALTTV 363
Query: 403 YSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTF 462
YSK ++E + K+F ++ SWN+MI+ + ++G A+ L+ EM+ P VT
Sbjct: 364 YSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTI 423
Query: 463 LSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEARSFIERMP 522
+L AC+ +G ++ G +++ + ++ M + G + EAR + M
Sbjct: 424 TCILSACAQLGALSLG-KWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMT 482
Query: 523 VKPDVLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDS---PAPYILMANIYSCS 574
K +V W ++ +HG + A +F +S P P + +Y+CS
Sbjct: 483 KKNEV-TWNTMISGYGLHGQGQ----EALNIFYEMLNSGITPTPVTFLCVLYACS 532
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 144/299 (48%), Gaps = 2/299 (0%)
Query: 179 HCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVITWTAVISGLVQNQLY 238
H + L G+ ++++ L G+ R +F ++ +V + ++ G N+
Sbjct: 40 HAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESP 99
Query: 239 EEGLKLFVKMHLGL-INPNSLTYLSSVMACSGLQALCEGRQIHGILWKLALQSDLCIESA 297
L +F + + PNS TY ++ A SG + GR IHG S+L + S
Sbjct: 100 HSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSN 159
Query: 298 LMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLFVKMV-KAGIEI 356
++ MY K VEDA ++F+ E D + ++ G+ +N E++Q+F ++ ++ +
Sbjct: 160 IVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRL 219
Query: 357 DPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIKVF 416
D + +L L LG QIHSL K+ S+ +V G I++YSKCG ++ +F
Sbjct: 220 DTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALF 279
Query: 417 SRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHVGLV 475
+ V++N+MI + +G +L L++E+ L G T +SL+ H+ L+
Sbjct: 280 REFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI 338
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 341 bits (875), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 186/559 (33%), Positives = 307/559 (54%), Gaps = 3/559 (0%)
Query: 90 VIWNSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLEL 149
+ NSL++ Y K + A +FD+M RD +SWN++++G +NG F + L
Sbjct: 351 TVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRC 410
Query: 150 GFYQLDQASFTIILSACDRSELSL-VSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSS 208
G + DQ + T +L A L +SK +H + V ALI +Y +
Sbjct: 411 GL-KPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMK 469
Query: 209 SGRKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACS 268
+F E +++ W A+++G Q+ + LKLF MH + T + C
Sbjct: 470 EAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCG 528
Query: 269 GLQALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTV 328
L A+ +G+Q+H K DL + S ++DMY KCG + A F+ D V+ T
Sbjct: 529 FLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTT 588
Query: 329 ILVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSD 388
++ G +NG EE A +F +M G+ D ++ + T+L G+QIH+ +K +
Sbjct: 589 MISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLN 648
Query: 389 FTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYE 448
T++PFV L++MY+KCG ++D+ +F R+ N +WN+M+ A+HG G + L+L++
Sbjct: 649 CTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFK 708
Query: 449 EMKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRA 508
+MK G++P VTF+ +L ACSH GLV++ + ++SM + I P EHY+C+ D +GRA
Sbjct: 709 QMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRA 768
Query: 509 GLLIEARSFIERMPVKPDVLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDSPAPYILMA 568
GL+ +A + IE M ++ +++ LL AC + GD+E GK A KL +P + Y+L++
Sbjct: 769 GLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLS 828
Query: 569 NIYSCSGRWKERAKAIKRMKEMGVDKETGISWIEIEKQVHSFVVDDKMHPQADTIHGVLA 628
N+Y+ + +W E A MK V K+ G SWIE++ ++H FVVDD+ + Q + I+ +
Sbjct: 829 NMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVK 888
Query: 629 ELLRLMIDEGYVPNKRFIL 647
+++R + EGYVP F L
Sbjct: 889 DMIRDIKQEGYVPETDFTL 907
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/422 (26%), Positives = 216/422 (51%), Gaps = 5/422 (1%)
Query: 124 NTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFTIILSACDRSELSLVSKMIHCLVY 183
N +S +L +G++ F +E + DQ +F ++L+ + + + + +HC+
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDV-ECDQVTFILMLATAVKVDSLALGQQVHCMAL 342
Query: 184 LCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVITWTAVISGLVQNQLYEEGLK 243
G + +TV N+LI Y K R VF M R++I+W +VI+G+ QN L E +
Sbjct: 343 KLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVC 402
Query: 244 LFVKMHLGLINPNSLTYLSSVMACSGL-QALCEGRQIHGILWKLALQSDLCIESALMDMY 302
LF+++ + P+ T S + A S L + L +Q+H K+ SD + +AL+D Y
Sbjct: 403 LFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAY 462
Query: 303 SKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVS 362
S+ +++A +FE D V+ ++ G+ Q+ + ++LF M K G D ++
Sbjct: 463 SRNRCMKEAEILFE-RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLA 521
Query: 363 AVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPR 422
V G ++ GKQ+H+ IKS + + +V++G+++MY KCGD+ + F +
Sbjct: 522 TVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVP 581
Query: 423 NSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFL 482
+ V+W +MI+ +G +A ++ +M+L GV P + T +L A S + + +G +
Sbjct: 582 DDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIH 641
Query: 483 KSMTEVHRISPRAEHYACVVDMVGRAGLLIEARSFIERMPVKPDVLVWQALLGACSIHGD 542
+ +++ + + +VDM + G + +A +R+ + ++ W A+L + HG+
Sbjct: 642 ANALKLNCTNDPFVGTS-LVDMYAKCGSIDDAYCLFKRIEMM-NITAWNAMLVGLAQHGE 699
Query: 543 SE 544
+
Sbjct: 700 GK 701
Score = 135 bits (341), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 130/490 (26%), Positives = 211/490 (43%), Gaps = 70/490 (14%)
Query: 62 LGPSLHASFIKTFEPFDNQNVYNVPNATVIWNSLLSFYLKCDQMRNAVKLFDDMPMRDTV 121
LG HA + TFE +N P +I N+L+S Y KC + A ++FD MP RD V
Sbjct: 57 LGKCTHARIL-TFE----EN----PERFLI-NNLISMYSKCGSLTYARRVFDKMPDRDLV 106
Query: 122 SWNTMVSGFLRNGE-----FDMGFGFFKRSLELGFYQLDQASFTIILSACDRSELSLVSK 176
SWN++++ + ++ E F F R L + + + +L C S S+
Sbjct: 107 SWNSILAAYAQSSECVVENIQQAFLLF-RILRQDVVYTSRMTLSPMLKLCLHSGYVWASE 165
Query: 177 MIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVITWTAVISGLVQNQ 236
H G + + V AL+ Y K G G+ +F EM R+V+ W ++ ++
Sbjct: 166 SFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMG 225
Query: 237 LYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGILWKLALQSDLCIES 296
EE + L H +NPN +T L LA S
Sbjct: 226 FKEEAIDLSSAFHSSGLNPNEIT-----------------------LRLLARIS------ 256
Query: 297 ALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVI------LVGFAQNGFEEEAMQLFVKMV 350
G DA Q+ FA D S++ I L + +G ++ F MV
Sbjct: 257 ---------GDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMV 307
Query: 351 KAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLE 410
++ +E D +L SL LG+Q+H + +K V+N LINMY K
Sbjct: 308 ESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFG 367
Query: 411 DSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACS 470
+ VF M+ R+ +SWNS+IA A++G +A+ L+ ++ G++P T S+L A S
Sbjct: 368 FARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
Query: 471 HVGLVNKGMEFLKSMTEVH--RISPRAEHY--ACVVDMVGRAGLLIEARSFIERMPVKPD 526
+ +G+ K + VH +I+ ++ + ++D R + EA ER D
Sbjct: 428 SLP---EGLSLSKQV-HVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF--D 481
Query: 527 VLVWQALLGA 536
++ W A++
Sbjct: 482 LVAWNAMMAG 491
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 88/185 (47%), Gaps = 37/185 (20%)
Query: 372 TSLGLGKQIHSLIIKSDFTSNP--FVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNS 429
+ L LGK H+ I+ F NP F+ N LI+MYSKCG L + +VF +M R+ VSWNS
Sbjct: 53 SDLMLGKCTHARILT--FEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNS 110
Query: 430 MIAAFARHG-----NGFKALELYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKS 484
++AA+A+ N +A L+ ++ + V + +T +L C H G V F
Sbjct: 111 ILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESF--- 167
Query: 485 MTEVHRISPRAEHYACVVDMVGR---AGLLI----------EARSFIERMPVKPDVLVWQ 531
YAC + + G AG L+ E + E MP + DV++W
Sbjct: 168 -----------HGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWN 215
Query: 532 ALLGA 536
+L A
Sbjct: 216 LMLKA 220
Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 122/268 (45%), Gaps = 11/268 (4%)
Query: 159 FTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMR 218
F + +A S+L ++ K H + E + N LI+ Y KCGS + R+VF +M
Sbjct: 43 FGFLRNAITSSDL-MLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP 101
Query: 219 VRNVITWTAVISGLVQN-----QLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQAL 273
R++++W ++++ Q+ + ++ LF + ++ + +T + C +
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 161
Query: 274 CEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGF 333
HG K+ L D + AL+++Y K G V++ +FE D V ++L +
Sbjct: 162 WASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAY 221
Query: 334 AQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVL--GVFGVDTSLGLGKQIHSLIIKSDFTS 391
+ GF+EEA+ L +G ++PN ++ L + G D+ G K + S +
Sbjct: 222 LEMGFKEEAIDLSSAFHSSG--LNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSE 279
Query: 392 NPFVNNGLINMYSKCGDLEDSIKVFSRM 419
F N GL + Y G +K F+ M
Sbjct: 280 IIFRNKGL-SEYLHSGQYSALLKCFADM 306
>sp|Q84MA3|PP345_ARATH Pentatricopeptide repeat-containing protein At4g32430,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E40 PE=2
SV=1
Length = 763
Score = 341 bits (874), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 198/599 (33%), Positives = 331/599 (55%), Gaps = 30/599 (5%)
Query: 36 TSKLVLDNYVDISRLLSISAKEGHFHLGPSLHASFIKTFEPFDNQNVYNVPNATVIWNSL 95
++ +V D + + L EG F LG L ++ +KT + + V+ NS
Sbjct: 167 SAGVVFDAFTYSTALSFCVGSEG-FLLGLQLQSTVVKT----------GLESDLVVGNSF 215
Query: 96 LSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLD 155
++ Y + R A ++FD+M +D +SWN+++SG + G F R + +LD
Sbjct: 216 ITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELD 275
Query: 156 QASFT-IILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVF 214
SFT +I + C ++L L ++ IH L GYE + VGN L++ Y KCG + + VF
Sbjct: 276 HVSFTSVITTCCHETDLKL-ARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVF 334
Query: 215 GEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALC 274
+M RNV++WT +IS N+ ++ + +F+ M + PN +T++ + A + +
Sbjct: 335 HQMSERNVVSWTTMIS---SNK--DDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIK 389
Query: 275 EGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFA 334
EG +IHG+ K S+ + ++ + +Y+K ++EDA + FE + +S ++ GFA
Sbjct: 390 EGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFA 449
Query: 335 QNGFEEEAMQLFVKMVKAGIEIDPNMVS--AVLGV--FGVDTSLGLGKQIHSLIIKSDFT 390
QNGF EA+++F+ A E PN + +VL F D S+ G++ H+ ++K
Sbjct: 450 QNGFSHEALKMFLS---AAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLN 506
Query: 391 SNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEM 450
S P V++ L++MY+K G++++S KVF+ M+ +N W S+I+A++ HG+ + L+ +M
Sbjct: 507 SCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKM 566
Query: 451 KLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGL 510
E V P VTFLS+L AC+ G+V+KG E M EV+ + P EHY+C+VDM+GRAG
Sbjct: 567 IKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGR 626
Query: 511 LIEARSFIERMPVKPDVLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDSPAPYILMANI 570
L EA + +P P + Q++LG+C +HG+ +MG AE +P+ Y+ M NI
Sbjct: 627 LKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNI 686
Query: 571 YSCSGRWKERAKAIKRMKEMGVDKETGISWIEIEK-----QVHSFVVDDKMHPQADTIH 624
Y+ W + A+ K M++ V KE G SWI++ + F DK HP++D I+
Sbjct: 687 YAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIY 745
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 146/509 (28%), Positives = 244/509 (47%), Gaps = 39/509 (7%)
Query: 46 DISRLLSISAKEGHFHLGPSLHA-SFIKTFEPFDNQNVYNVPNATVIWNSLLSFYLKCDQ 104
+++ L++ A G G +H S F F + N+++ Y K +
Sbjct: 78 EVTLCLALKACRGDLKRGCQIHGFSTTSGFTSF-----------VCVSNAVMGMYRKAGR 126
Query: 105 MRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFTIILS 164
NA+ +F+++ D VSWNT++SGF N + F R G D +++ LS
Sbjct: 127 FDNALCIFENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVV-FDAFTYSTALS 182
Query: 165 ACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVIT 224
C SE L+ + V G E ++ VGN+ IT Y + GS R+VF EM +++I+
Sbjct: 183 FCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMIS 242
Query: 225 WTAVISGLVQNQLYE-EGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGIL 283
W +++SGL Q + E + +F M + + +++ S + C L RQIHG+
Sbjct: 243 WNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLC 302
Query: 284 WKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAM 343
K +S L + + LM YSKCG +E +F E + VS T ++ + +++A+
Sbjct: 303 IKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAV 357
Query: 344 QLFVKMVKAGIEIDPNMVSAV--LGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLIN 401
+F+ M G+ PN V+ V + + + G +IH L IK+ F S P V N I
Sbjct: 358 SIFLNMRFDGVY--PNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFIT 415
Query: 402 MYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVT 461
+Y+K LED+ K F + R +SWN+MI+ FA++G +AL+++ E + P + T
Sbjct: 416 LYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYT 474
Query: 462 FLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVV------DMVGRAGLLIEAR 515
F S+L+A + ++ +K H + +C V DM + G + E+
Sbjct: 475 FGSVLNAIAFAEDIS-----VKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESE 529
Query: 516 SFIERMPVKPDVLVWQALLGACSIHGDSE 544
M K + VW +++ A S HGD E
Sbjct: 530 KVFNEMSQK-NQFVWTSIISAYSSHGDFE 557
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 132/462 (28%), Positives = 231/462 (50%), Gaps = 20/462 (4%)
Query: 106 RNAVKLFDDMPMRD-TVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFY--QLDQASFTII 162
R A KLFD R+ T S N +S LR FK +L+LG++ +D+ + +
Sbjct: 25 RIAHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLA 84
Query: 163 LSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNV 222
L AC R +L + IH G+ V V NA++ Y K G + +F + +V
Sbjct: 85 LKAC-RGDLKRGCQ-IHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDV 142
Query: 223 ITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGI 282
++W ++SG NQ+ L V+M + ++ TY +++ C G + G Q+
Sbjct: 143 VSWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQST 199
Query: 283 LWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNG-FEEE 341
+ K L+SDL + ++ + MYS+ GS A ++F+ D +S +L G +Q G F E
Sbjct: 200 VVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFE 259
Query: 342 AMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLIN 401
A+ +F M++ G+E+D ++V+ +T L L +QIH L IK + S V N L++
Sbjct: 260 AVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMS 319
Query: 402 MYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVT 461
YSKCG LE VF +M+ RN VSW +MI++ N A+ ++ M+ +GV P +VT
Sbjct: 320 RYSKCGVLEAVKSVFHQMSERNVVSWTTMISS-----NKDDAVSIFLNMRFDGVYPNEVT 374
Query: 462 FLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEARSFIERM 521
F+ L++A + +G++ + +S + + + + + L +A+ E +
Sbjct: 375 FVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNS-FITLYAKFEALEDAKKAFEDI 433
Query: 522 PVKPDVLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDSPAP 563
+ +++ W A++ + +G S + A K+FL+ P
Sbjct: 434 TFR-EIISWNAMISGFAQNGFS----HEALKMFLSAAAETMP 470
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 340 bits (873), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 198/596 (33%), Positives = 321/596 (53%), Gaps = 33/596 (5%)
Query: 50 LLSISAKEGHFHLGPSLHASFIKTFEPFDNQNVYNVPNATVIWNSLLSFYLKCDQMRNAV 109
+L A LG LHA +K+ D ++ + L Y KCD M++A
Sbjct: 287 VLRSCAALSELRLGGQLHAHALKSDFAADG----------IVRTATLDMYAKCDNMQDAQ 336
Query: 110 KLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFTIILSACDRS 169
LFD+ + S+N M++G+ + F R + G D+ S + + AC
Sbjct: 337 ILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGL-GFDEISLSGVFRACALV 395
Query: 170 ELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVITWTAVI 229
+ I+ L +V V NA I Y KC + + +VF EMR R+ ++W A+I
Sbjct: 396 KGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAII 455
Query: 230 SGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGILWKLALQ 289
+ QN E L LFV M I P+ T+ S + AC+G +L G +IH + K +
Sbjct: 456 AAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMA 514
Query: 290 SDLCIESALMDMYSKCGSVEDAWQI----FEFA------EELDG----------VSMTVI 329
S+ + +L+DMYSKCG +E+A +I F+ A EEL+ VS I
Sbjct: 515 SNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSI 574
Query: 330 LVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDF 389
+ G+ E+A LF +M++ GI D + VL S GLGKQIH+ +IK +
Sbjct: 575 ISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKEL 634
Query: 390 TSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEE 449
S+ ++ + L++MYSKCGDL DS +F + R+ V+WN+MI +A HG G +A++L+E
Sbjct: 635 QSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFER 694
Query: 450 MKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAG 509
M LE ++P VTF+S+L AC+H+GL++KG+E+ M + + P+ HY+ +VD++G++G
Sbjct: 695 MILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSG 754
Query: 510 LLIEARSFIERMPVKPDVLVWQALLGACSIHGDS-EMGKYAAEKLFLAQPDSPAPYILMA 568
+ A I MP + D ++W+ LLG C+IH ++ E+ + A L P + Y L++
Sbjct: 755 KVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLS 814
Query: 569 NIYSCSGRWKERAKAIKRMKEMGVDKETGISWIEIEKQVHSFVVDDKMHPQADTIH 624
N+Y+ +G W++ + + M+ + KE G SW+E++ ++H F+V DK HP+ + I+
Sbjct: 815 NVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIY 870
Score = 228 bits (581), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 154/499 (30%), Positives = 247/499 (49%), Gaps = 34/499 (6%)
Query: 55 AKEGHFHLGPSLHASFIKT-FEP------------------------FDNQNVYNVPNAT 89
AK+G LG HA I + F P FD + +V
Sbjct: 59 AKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDV---- 114
Query: 90 VIWNSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLEL 149
V WN +++ Y K + M A F+ MP+RD VSWN+M+SG+L+NGE F
Sbjct: 115 VSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGRE 174
Query: 150 GFYQLDQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSS 209
G + D +F IIL C E + + IH +V G + +V +AL+ Y K
Sbjct: 175 GI-EFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVE 233
Query: 210 GRKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSG 269
+VF + +N ++W+A+I+G VQN L LK F +M + Y S + +C+
Sbjct: 234 SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAA 293
Query: 270 LQALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVI 329
L L G Q+H K +D + +A +DMY+KC +++DA +F+ +E L+ S +
Sbjct: 294 LSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAM 353
Query: 330 LVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDF 389
+ G++Q +A+ LF +++ +G+ D +S V + L G QI+ L IKS
Sbjct: 354 ITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSL 413
Query: 390 TSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEE 449
+ + V N I+MY KC L ++ +VF M R++VSWN++IAA ++G G++ L L+
Sbjct: 414 SLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVS 473
Query: 450 MKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYAC-VVDMVGRA 508
M +EP + TF S+L AC+ G + GME S+ + S + C ++DM +
Sbjct: 474 MLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSS--VGCSLIDMYSKC 530
Query: 509 GLLIEARSFIERMPVKPDV 527
G++ EA R + +V
Sbjct: 531 GMIEEAEKIHSRFFQRANV 549
Score = 149 bits (375), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 111/457 (24%), Positives = 208/457 (45%), Gaps = 48/457 (10%)
Query: 157 ASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGE 216
+F+ + C + + K H + + G+ V N L+ Y S VF +
Sbjct: 49 TNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDK 108
Query: 217 MRVRNVITWTAVI-------------------------------SGLVQNQLYEEGLKLF 245
M +R+V++W +I SG +QN + +++F
Sbjct: 109 MPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVF 168
Query: 246 VKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGILWKLALQSDLCIESALMDMYSKC 305
V M I + T+ + CS L+ G QIHGI+ ++ +D+ SAL+DMY+K
Sbjct: 169 VDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKG 228
Query: 306 GSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVL 365
++ ++F+ E + VS + I+ G QN A++ F +M K + ++ ++VL
Sbjct: 229 KRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVL 288
Query: 366 GVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSV 425
+ L LG Q+H+ +KSDF ++ V ++MY+KC +++D+ +F N
Sbjct: 289 RSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQ 348
Query: 426 SWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGMEF---- 481
S+N+MI +++ +GFKAL L+ + G+ +++ + AC+ V +++G++
Sbjct: 349 SYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLA 408
Query: 482 LKSMTEVHRISPRAEHYACVVDMVGRAGLLIEARSFIERMPVKPDVLVWQALLGACSIHG 541
+KS + A +DM G+ L EA + M + D + W A++ A +G
Sbjct: 409 IKSSLSLDVCVANA-----AIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAAHEQNG 462
Query: 542 DSEMGKYAAEKLFLAQPDS---PAPYILMANIYSCSG 575
Y LF++ S P + + + +C+G
Sbjct: 463 KG----YETLFLFVSMLRSRIEPDEFTFGSILKACTG 495
>sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containing protein At3g47840
OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1
Length = 706
Score = 335 bits (860), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 191/584 (32%), Positives = 306/584 (52%), Gaps = 17/584 (2%)
Query: 47 ISRLLSISAKEGHFHLGPSLHASFIKTFEPFDNQNVYNVPNATVIWNSLLSFYLKCDQMR 106
+S +L + + G SLHA +KT ++ ++ + +SLL Y + ++
Sbjct: 111 LSVVLKACGQSSNIAYGESLHAYAVKT----------SLLSSVYVGSSLLDMYKRVGKID 160
Query: 107 NAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFK---RSLELGFYQLDQASFTIIL 163
+ ++F +MP R+ V+W +++G + G + G +F RS EL D +F I L
Sbjct: 161 KSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELS----DTYTFAIAL 216
Query: 164 SACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVI 223
AC K IH V + G+ + V N+L T Y +CG G +F M R+V+
Sbjct: 217 KACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVV 276
Query: 224 TWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGIL 283
+WT++I + + ++ F+KM + PN T+ S AC+ L L G Q+H +
Sbjct: 277 SWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNV 336
Query: 284 WKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAM 343
L L L + +++M MYS CG++ A +F+ D +S + I+ G+ Q GF EE
Sbjct: 337 LSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGF 396
Query: 344 QLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMY 403
+ F M ++G + ++++L V G + G+Q+H+L + N V + LINMY
Sbjct: 397 KYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMY 456
Query: 404 SKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFL 463
SKCG ++++ +F + VS +MI +A HG +A++L+E+ G P VTF+
Sbjct: 457 SKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFI 516
Query: 464 SLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEARSFIERMPV 523
S+L AC+H G ++ G + M E + + P EHY C+VD++ RAG L +A I M
Sbjct: 517 SVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSW 576
Query: 524 KPDVLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDSPAPYILMANIYSCSGRWKERAKA 583
K D +VW LL AC GD E G+ AAE++ P + +ANIYS +G +E A
Sbjct: 577 KKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANV 636
Query: 584 IKRMKEMGVDKETGISWIEIEKQVHSFVVDDKMHPQADTIHGVL 627
K MK GV KE G S I+I+ V +FV D+ HPQ++ I+ +L
Sbjct: 637 RKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNIL 680
Score = 192 bits (487), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 120/470 (25%), Positives = 233/470 (49%), Gaps = 8/470 (1%)
Query: 80 QNVYNVPNATVIW---NSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEF 136
+N+ + N ++ NS L + +R A ++FD MP D VSW +++ ++
Sbjct: 28 ENIVRISNQVMVKFDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNS 87
Query: 137 DMGFGFFK--RSLELGFYQLDQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVG 194
D F R ++ D + +++L AC +S + +H V VG
Sbjct: 88 DEALILFSAMRVVDHAV-SPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVG 146
Query: 195 NALITSYFKCGSSSSGRKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLIN 254
++L+ Y + G +VF EM RN +TWTA+I+GLV Y+EGL F +M
Sbjct: 147 SSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEEL 206
Query: 255 PNSLTYLSSVMACSGLQALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQI 314
++ T+ ++ AC+GL+ + G+ IH + + LC+ ++L MY++CG ++D +
Sbjct: 207 SDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCL 266
Query: 315 FEFAEELDGVSMTVILVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSL 374
FE E D VS T ++V + + G E +A++ F+KM + + + +++ + L
Sbjct: 267 FENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRL 326
Query: 375 GLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAF 434
G+Q+H ++ + V+N ++ MYS CG+L + +F M R+ +SW+++I +
Sbjct: 327 VWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGY 386
Query: 435 ARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPR 494
+ G G + + + M+ G +PTD SLL ++ ++ G + + ++ +
Sbjct: 387 CQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQ-VHALALCFGLEQN 445
Query: 495 AEHYACVVDMVGRAGLLIEARSFIERMPVKPDVLVWQALLGACSIHGDSE 544
+ + +++M + G + EA S I + D++ A++ + HG S+
Sbjct: 446 STVRSSLINMYSKCGSIKEA-SMIFGETDRDDIVSLTAMINGYAEHGKSK 494
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 335 bits (859), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 169/494 (34%), Positives = 287/494 (58%), Gaps = 5/494 (1%)
Query: 155 DQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVF 214
D A+++ ++ C + +I +Y G+ + + N LI Y K + ++F
Sbjct: 60 DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119
Query: 215 GEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALC 274
+M RNVI+WT +IS + +++++ L+L V M + PN TY S + +C+G+ +
Sbjct: 120 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV- 178
Query: 275 EGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFA 334
R +H + K L+SD+ + SAL+D+++K G EDA +F+ D + I+ GFA
Sbjct: 179 --RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFA 236
Query: 335 QNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPF 394
QN + A++LF +M +AG + +++VL L LG Q H I+K D +
Sbjct: 237 QNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD--QDLI 294
Query: 395 VNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEG 454
+NN L++MY KCG LED+++VF++M R+ ++W++MI+ A++G +AL+L+E MK G
Sbjct: 295 LNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSG 354
Query: 455 VEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEA 514
+P +T + +L ACSH GL+ G + +SM +++ I P EHY C++D++G+AG L +A
Sbjct: 355 TKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDA 414
Query: 515 RSFIERMPVKPDVLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDSPAPYILMANIYSCS 574
+ M +PD + W+ LLGAC + + + +YAA+K+ P+ Y L++NIY+ S
Sbjct: 415 VKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANS 474
Query: 575 GRWKERAKAIKRMKEMGVDKETGISWIEIEKQVHSFVVDDKMHPQADTIHGVLAELLRLM 634
+W + RM++ G+ KE G SWIE+ KQ+H+F++ D HPQ + L +L+ +
Sbjct: 475 QKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRL 534
Query: 635 IDEGYVPNKRFILH 648
GYVP F+L
Sbjct: 535 TGIGYVPETNFVLQ 548
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 201/385 (52%), Gaps = 28/385 (7%)
Query: 93 NSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFY 152
N L++ Y+K + + +A +LFD MP R+ +SW TM+S + + +++LEL
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSK-------CKIHQKALELLVL 152
Query: 153 QL------DQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGS 206
L + +++ +L +C+ +S V +M+HC + G E +V V +ALI + K G
Sbjct: 153 MLRDNVRPNVYTYSSVLRSCN--GMSDV-RMLHCGIIKEGLESDVFVRSALIDVFAKLGE 209
Query: 207 SSSGRKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMA 266
VF EM + I W ++I G QN + L+LF +M T S + A
Sbjct: 210 PEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRA 269
Query: 267 CSGLQALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSM 326
C+GL L G Q H + K DL + +AL+DMY KCGS+EDA ++F +E D ++
Sbjct: 270 CTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITW 327
Query: 327 TVILVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQ--IHSLI 384
+ ++ G AQNG+ +EA++LF +M +G + PN ++ ++GV + GL + +
Sbjct: 328 STMISGLAQNGYSQEALKLFERMKSSGTK--PNYIT-IVGVLFACSHAGLLEDGWYYFRS 384
Query: 385 IKSDFTSNPFVNN--GLINMYSKCGDLEDSIKVFSRM-APRNSVSWNSMIAAFARHGNGF 441
+K + +P + +I++ K G L+D++K+ + M ++V+W +++ A N
Sbjct: 385 MKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRN-- 442
Query: 442 KALELYEEMKLEGVEPTDVTFLSLL 466
L Y K+ ++P D +LL
Sbjct: 443 MVLAEYAAKKVIALDPEDAGTYTLL 467
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 12/86 (13%)
Query: 60 FHLGPSLHASFIKTFEPFDNQNVYNVPNATVIWNSLLSFYLKCDQMRNAVKLFDDMPMRD 119
LG H +K +D + N N+L+ Y KC + +A+++F+ M RD
Sbjct: 276 LELGMQAHVHIVK----YDQDLILN--------NALVDMYCKCGSLEDALRVFNQMKERD 323
Query: 120 TVSWNTMVSGFLRNGEFDMGFGFFKR 145
++W+TM+SG +NG F+R
Sbjct: 324 VITWSTMISGLAQNGYSQEALKLFER 349
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 335 bits (858), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 183/548 (33%), Positives = 306/548 (55%), Gaps = 8/548 (1%)
Query: 93 NSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFF--KRSLELG 150
N+L++ Y+KC +++A LFD MP RD +SWN M+SG+ NG G F R L +
Sbjct: 235 NALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSV- 293
Query: 151 FYQLDQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSG 210
D + T ++SAC+ + + IH V G+ +++V N+L Y GS
Sbjct: 294 --DPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREA 351
Query: 211 RKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGL 270
K+F M +++++WT +ISG N L ++ + + M + P+ +T + + AC+ L
Sbjct: 352 EKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATL 411
Query: 271 QALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVIL 330
L G ++H + K L S + + + L++MYSKC ++ A IF + +S T I+
Sbjct: 412 GDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSII 471
Query: 331 VGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFT 390
G N EA+ +F++ +K ++ + ++A L +L GK+IH+ ++++
Sbjct: 472 AGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVG 530
Query: 391 SNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEM 450
+ F+ N L++MY +CG + + F+ ++ SWN ++ ++ G G +EL++ M
Sbjct: 531 LDDFLPNALLDMYVRCGRMNTAWSQFNSQ-KKDVTSWNILLTGYSERGQGSMVVELFDRM 589
Query: 451 KLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGL 510
V P ++TF+SLL CS +V +G+ + M E + ++P +HYACVVD++GRAG
Sbjct: 590 VKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGE 648
Query: 511 LIEARSFIERMPVKPDVLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDSPAPYILMANI 570
L EA FI++MPV PD VW ALL AC IH ++G+ +A+ +F S YIL+ N+
Sbjct: 649 LQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNL 708
Query: 571 YSCSGRWKERAKAIKRMKEMGVDKETGISWIEIEKQVHSFVVDDKMHPQADTIHGVLAEL 630
Y+ G+W+E AK + MKE G+ + G SW+E++ +VH+F+ DDK HPQ I+ VL
Sbjct: 709 YADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGF 768
Query: 631 LRLMIDEG 638
M + G
Sbjct: 769 YEKMSEVG 776
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 142/457 (31%), Positives = 223/457 (48%), Gaps = 12/457 (2%)
Query: 93 NSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFY 152
N+ L+ +++ + +A +F M R+ SWN +V G+ + G FD + R L +G
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 153 QLDQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRK 212
+ D +F +L C K +H V GYE ++ V NALIT Y KCG S R
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 213 VFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQA 272
+F M R++I+W A+ISG +N + EGL+LF M ++P+ +T S + AC L
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGD 312
Query: 273 LCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVG 332
GR IH + D+ + ++L MY GS +A ++F E D VS T ++ G
Sbjct: 313 RRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISG 372
Query: 333 FAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSN 392
+ N ++A+ + M + ++ D V+AVL L G ++H L IK+ S
Sbjct: 373 YEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISY 432
Query: 393 PFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKL 452
V N LINMYSKC ++ ++ +F + +N +SW S+IA + F+AL +MK+
Sbjct: 433 VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKM 492
Query: 453 EGVEPTDVTFLSLLHACSHVGLVNKGMEF----LKSMTEVHRISPRAEHYACVVDMVGRA 508
++P +T + L AC+ +G + G E L++ + P A ++DM R
Sbjct: 493 T-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNA-----LLDMYVRC 546
Query: 509 GLLIEARSFIERMPVKPDVLVWQALLGACSIHGDSEM 545
G + A S K DV W LL S G M
Sbjct: 547 GRMNTAWSQFNSQ--KKDVTSWNILLTGYSERGQGSM 581
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/494 (23%), Positives = 228/494 (46%), Gaps = 29/494 (5%)
Query: 51 LSISAKEGHFHLGPSLHASFIKTFEPFDNQNVYNVPNATVIWN-SLLSFYLKCDQMRNAV 109
++ SA+ HF+L P SF Y N WN + +L+ ++
Sbjct: 1 MASSAQSPHFYLNPGKSNSF--------QSKAYKQRNVNFYWNFGIRRLFLR----KSQG 48
Query: 110 KLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFTIILSACDRS 169
T N+ + G NG+ + EL +D+ F ++ C+
Sbjct: 49 LSVLSSSSSSTHFSNSQLHGLCANGKLEEAMKLLNSMQELRV-AVDEDVFVALVRLCEWK 107
Query: 170 ELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVITWTAVI 229
++ + V +GNA + + + G+ VFG+M RN+ +W ++
Sbjct: 108 RAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLV 167
Query: 230 SGLVQNQLYEEGLKLFVKM-HLGLINPNSLTYLSSVMACSGLQALCEGRQIHGILWKLAL 288
G + ++E + L+ +M +G + P+ T+ + C G+ L G+++H + +
Sbjct: 168 GGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGY 227
Query: 289 QSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLFVK 348
+ D+ + +AL+ MY KCG V+ A +F+ D +S ++ G+ +NG E ++LF
Sbjct: 228 ELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFA 287
Query: 349 MVKAGIEIDPNM--VSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKC 406
M G+ +DP++ +++V+ + LG+ IH+ +I + F + V N L MY
Sbjct: 288 M--RGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNA 345
Query: 407 GDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLL 466
G ++ K+FSRM ++ VSW +MI+ + + KA++ Y M + V+P ++T ++L
Sbjct: 346 GSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVL 405
Query: 467 HACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACV----VDMVGRAGLLIEARSFIERMP 522
AC+ +G ++ G+E K + IS Y V ++M + + +A +P
Sbjct: 406 SACATLGDLDTGVELHKLAIKARLIS-----YVIVANNLINMYSKCKCIDKALDIFHNIP 460
Query: 523 VKPDVLVWQALLGA 536
K +V+ W +++
Sbjct: 461 RK-NVISWTSIIAG 473
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 185/391 (47%), Gaps = 22/391 (5%)
Query: 53 ISAKE--GHFHLGPSLHASFIKTFEPFDNQNVYNVPNATVIWNSLLSFYLKCDQMRNAVK 110
ISA E G LG +HA I T D + NSL YL R A K
Sbjct: 304 ISACELLGDRRLGRDIHAYVITTGFAVD----------ISVCNSLTQMYLNAGSWREAEK 353
Query: 111 LFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFTIILSACDRSE 170
LF M +D VSW TM+SG+ N D + R ++ + D+ + +LSAC
Sbjct: 354 LFSRMERKDIVSWTTMISGYEYNFLPDKAIDTY-RMMDQDSVKPDEITVAAVLSACATLG 412
Query: 171 LSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVITWTAVIS 230
+H L V V N LI Y KC +F + +NVI+WT++I+
Sbjct: 413 DLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIA 472
Query: 231 GLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGILWKLALQS 290
GL N E L +M + L PN++T +++ AC+ + AL G++IH + + +
Sbjct: 473 GLRLNNRCFEALIFLRQMKMTL-QPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGL 531
Query: 291 DLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLFVKMV 350
D + +AL+DMY +CG + AW F +++ D S ++L G+++ G ++LF +MV
Sbjct: 532 DDFLPNALLDMYVRCGRMNTAWSQFN-SQKKDVTSWNILLTGYSERGQGSMVVELFDRMV 590
Query: 351 KAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNN--GLINMYSKCGD 408
K+ + P+ ++ + + G S + + + D+ P + + ++++ + G+
Sbjct: 591 KS--RVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGE 648
Query: 409 LEDSIKVFSRM--APRNSVSWNSMIAAFARH 437
L+++ K +M P +V W +++ A H
Sbjct: 649 LQEAHKFIQKMPVTPDPAV-WGALLNACRIH 678
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 335 bits (858), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 197/560 (35%), Positives = 310/560 (55%), Gaps = 13/560 (2%)
Query: 94 SLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQ 153
SL+ Y + + NA LFD+MP+RD SWN M+SG+ ++G +L G
Sbjct: 190 SLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL-----TLSNGLRA 244
Query: 154 LDQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKV 213
+D + +LSAC + IH G E E+ V N LI Y + G +KV
Sbjct: 245 MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKV 304
Query: 214 FGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQAL 273
F M VR++I+W ++I N+ + LF +M L I P+ LT +S S L +
Sbjct: 305 FDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDI 364
Query: 274 CEGRQIHGI-LWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVG 332
R + G L K D+ I +A++ MY+K G V+ A +F + D +S I+ G
Sbjct: 365 RACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISG 424
Query: 333 FAQNGFEEEAMQLFVKMVKAGIEIDPNMVS--AVLGVFGVDTSLGLGKQIHSLIIKSDFT 390
+AQNGF EA++++ M + G EI N + +VL +L G ++H ++K+
Sbjct: 425 YAQNGFASEAIEMYNIMEEEG-EIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLY 483
Query: 391 SNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEM 450
+ FV L +MY KCG LED++ +F ++ NSV WN++IA HG+G KA+ L++EM
Sbjct: 484 LDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEM 543
Query: 451 KLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGL 510
EGV+P +TF++LL ACSH GLV++G + M + I+P +HY C+VDM GRAG
Sbjct: 544 LDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQ 603
Query: 511 LIEARSFIERMPVKPDVLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDSPAPYILMANI 570
L A FI+ M ++PD +W ALL AC +HG+ ++GK A+E LF +P+ ++L++N+
Sbjct: 604 LETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNM 663
Query: 571 YSCSGRWK--ERAKAIKRMKEMGVDKETGISWIEIEKQVHSFVVDDKMHPQADTIHGVLA 628
Y+ +G+W+ + ++I K G+ K G S +E++ +V F ++ HP + ++ L
Sbjct: 664 YASAGKWEGVDEIRSIAHGK--GLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELT 721
Query: 629 ELLRLMIDEGYVPNKRFILH 648
L + GYVP+ RF+L
Sbjct: 722 ALQAKLKMIGYVPDHRFVLQ 741
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 139/545 (25%), Positives = 248/545 (45%), Gaps = 55/545 (10%)
Query: 95 LLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNG---EFDMGFGFFKRSLELGF 151
L++ Y + A FD + RD +WN M+SG+ R G E F F S L
Sbjct: 92 LVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGL-- 149
Query: 152 YQLDQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGR 211
D +F +L AC + IHCL G+ +V V +LI Y + + + R
Sbjct: 150 -TPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNAR 205
Query: 212 KVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQ 271
+F EM VR++ +W A+ISG Q+ +E L L GL +S+T +S + AC+
Sbjct: 206 ILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL----SNGLRAMDSVTVVSLLSACTEAG 261
Query: 272 ALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILV 331
G IH K L+S+L + + L+D+Y++ G + D ++F+ D +S I+
Sbjct: 262 DFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIK 321
Query: 332 GFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSD-FT 390
+ N A+ LF +M + I+ D + ++ + + + + ++ F
Sbjct: 322 AYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFL 381
Query: 391 SNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEM 450
+ + N ++ MY+K G ++ + VF+ + + +SWN++I+ +A++G +A+E+Y M
Sbjct: 382 EDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIM 441
Query: 451 KLEG-VEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAG 509
+ EG + T++S+L ACS G + +GM+ + + + + + DM G+ G
Sbjct: 442 EEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLK-NGLYLDVFVVTSLADMYGKCG 500
Query: 510 LLIEARSFIERMP----------------------------------VKPDVLVWQALLG 535
L +A S ++P VKPD + + LL
Sbjct: 501 RLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 560
Query: 536 ACSIHGDSEMGKYAAEKLFLAQPDSPA--PYILMANIYSCSGRWKERAKAIKRMKEMGVD 593
ACS G + G++ E + +P+ Y M ++Y GR + A+K +K M +
Sbjct: 561 ACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMY---GRAGQLETALKFIKSMSLQ 617
Query: 594 KETGI 598
+ I
Sbjct: 618 PDASI 622
Score = 152 bits (385), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 210/429 (48%), Gaps = 23/429 (5%)
Query: 45 VDISRLLSISAKEGHFHLGPSLHASFIKTFEPFDNQNVYNVPNATVIWNSLLSFYLKCDQ 104
V + LLS + G F+ G ++H+ IK + + + + N L+ Y + +
Sbjct: 248 VTVVSLLSACTEAGDFNRGVTIHSYSIK----------HGLESELFVSNKLIDLYAEFGR 297
Query: 105 MRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFTIILS 164
+R+ K+FD M +RD +SWN+++ + N + F+ E+ ++ T+I
Sbjct: 298 LRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQ---EMRLSRIQPDCLTLISL 354
Query: 165 ACDRSELSLVS--KMIHCLVYLCG-YEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRN 221
A S+L + + + G + E++T+GNA++ Y K G S R VF + +
Sbjct: 355 ASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTD 414
Query: 222 VITWTAVISGLVQNQLYEEGLKLFVKM-HLGLINPNSLTYLSSVMACSGLQALCEGRQIH 280
VI+W +ISG QN E ++++ M G I N T++S + ACS AL +G ++H
Sbjct: 415 VISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLH 474
Query: 281 GILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEE 340
G L K L D+ + ++L DMY KCG +EDA +F ++ V ++ +G E
Sbjct: 475 GRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGE 534
Query: 341 EAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNN--G 398
+A+ LF +M+ G++ D +L + G+ + +++D+ P + +
Sbjct: 535 KAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEM-MQTDYGITPSLKHYGC 593
Query: 399 LINMYSKCGDLEDSIKVFSRMAPRNSVS-WNSMIAAFARHGNGFKALELYEEMKLEGVEP 457
+++MY + G LE ++K M+ + S W ++++A HGN ++ E E VEP
Sbjct: 594 MVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGN-VDLGKIASEHLFE-VEP 651
Query: 458 TDVTFLSLL 466
V + LL
Sbjct: 652 EHVGYHVLL 660
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 180/379 (47%), Gaps = 31/379 (8%)
Query: 175 SKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVITWTAVISGLVQ 234
+K +H + + + V + L+ Y G+ + R F ++ R+V W +ISG +
Sbjct: 70 AKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGR 129
Query: 235 NQLYEEGLKLFVKMHLGL-INPNSLTYLSSVMACSGLQALCEGRQIHGILWKLALQSDLC 293
E ++ F L + P+ T+ S + AC + + +G +IH + K D+
Sbjct: 130 AGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVY 186
Query: 294 IESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLFVKMVKAG 353
+ ++L+ +YS+ +V +A +F+ D S ++ G+ Q+G +EA+ L G
Sbjct: 187 VAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL-----SNG 241
Query: 354 IE-IDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDS 412
+ +D V ++L G IHS IK S FV+N LI++Y++ G L D
Sbjct: 242 LRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDC 301
Query: 413 IKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSL------- 465
KVF RM R+ +SWNS+I A+ + +A+ L++EM+L ++P +T +SL
Sbjct: 302 QKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQL 361
Query: 466 --LHACSHV-GLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEARSFIERMP 522
+ AC V G + FL+ +T + VV M + GL+ AR+ +P
Sbjct: 362 GDIRACRSVQGFTLRKGWFLEDITIGN----------AVVVMYAKLGLVDSARAVFNWLP 411
Query: 523 VKPDVLVWQALLGACSIHG 541
DV+ W ++ + +G
Sbjct: 412 -NTDVISWNTIISGYAQNG 429
Score = 89.4 bits (220), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 135/272 (49%), Gaps = 15/272 (5%)
Query: 267 CSGLQALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSM 326
C+ LQ+ + +H L ++CI + L+++Y G+V A F+ + D +
Sbjct: 64 CTNLQS---AKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAW 120
Query: 327 TVILVGFAQNGFEEEAMQLF-VKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLII 385
+++ G+ + G E ++ F + M+ +G+ D +VL ++ G +IH L +
Sbjct: 121 NLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLAL 177
Query: 386 KSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALE 445
K F + +V LI++YS+ + ++ +F M R+ SWN+MI+ + + GN +AL
Sbjct: 178 KFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALT 237
Query: 446 LYEEMKLEGVEPTD-VTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDM 504
L G+ D VT +SLL AC+ G N+G+ + S + H + ++D+
Sbjct: 238 LS-----NGLRAMDSVTVVSLLSACTEAGDFNRGVT-IHSYSIKHGLESELFVSNKLIDL 291
Query: 505 VGRAGLLIEARSFIERMPVKPDVLVWQALLGA 536
G L + + +RM V+ D++ W +++ A
Sbjct: 292 YAEFGRLRDCQKVFDRMYVR-DLISWNSIIKA 322
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 87/189 (46%), Gaps = 14/189 (7%)
Query: 361 VSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMA 420
+ V +F T+L K +H+ ++ S N ++ L+N+Y G++ + F +
Sbjct: 54 IDDVHTLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQ 113
Query: 421 PRNSVSWNSMIAAFARHGNGFKALELYEEMKL-EGVEPTDVTFLSLLHACSHVGLVNK-- 477
R+ +WN MI+ + R GN + + + L G+ P TF S+L AC V NK
Sbjct: 114 NRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIH 173
Query: 478 --GMEFLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEARSFIERMPVKPDVLVWQALLG 535
++F M +V+ A ++ + R + AR + MPV+ D+ W A++
Sbjct: 174 CLALKF-GFMWDVYVA-------ASLIHLYSRYKAVGNARILFDEMPVR-DMGSWNAMIS 224
Query: 536 ACSIHGDSE 544
G+++
Sbjct: 225 GYCQSGNAK 233
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 333 bits (855), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 178/518 (34%), Positives = 288/518 (55%), Gaps = 5/518 (0%)
Query: 91 IWNSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELG 150
+ N+LL+ Y+ ++ A +FD M RD +SWNTM+SG+ RNG + F +
Sbjct: 154 VQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNES 213
Query: 151 FYQLDQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSG 210
LD A+ +L C + + + +H LV +++ V NAL+ Y KCG
Sbjct: 214 V-DLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEA 272
Query: 211 RKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGL 270
R VF M R+VITWT +I+G ++ E L+L M + PN++T S V C
Sbjct: 273 RFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDA 332
Query: 271 QALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVIL 330
+ +G+ +HG + + SD+ IE++L+ MY+KC V+ +++F A + + I+
Sbjct: 333 LKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAII 392
Query: 331 VGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFT 390
G QN +A+ LF +M + +E + ++++L + L IH + K+ F
Sbjct: 393 AGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFM 452
Query: 391 SNPFVNNGLINMYSKCGDLEDSIKVFS----RMAPRNSVSWNSMIAAFARHGNGFKALEL 446
S+ GL+++YSKCG LE + K+F+ + ++ V W ++I+ + HG+G AL++
Sbjct: 453 SSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQV 512
Query: 447 YEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVG 506
+ EM GV P ++TF S L+ACSH GLV +G+ + M E ++ R+ HY C+VD++G
Sbjct: 513 FMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLG 572
Query: 507 RAGLLIEARSFIERMPVKPDVLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDSPAPYIL 566
RAG L EA + I +P +P VW ALL AC H + ++G+ AA KLF +P++ Y+L
Sbjct: 573 RAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVL 632
Query: 567 MANIYSCSGRWKERAKAIKRMKEMGVDKETGISWIEIE 604
+ANIY+ GRWK+ K M+ +G+ K+ G S IEI
Sbjct: 633 LANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEIR 670
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/456 (25%), Positives = 223/456 (48%), Gaps = 5/456 (1%)
Query: 91 IWNSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELG 150
I ++L Y C + A KLF++MP +S+N ++ ++R G + F R + G
Sbjct: 51 ILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEG 110
Query: 151 FYQL-DQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSS 209
+ D ++ + A + + ++H + + + V NAL+ Y G
Sbjct: 111 VKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEM 170
Query: 210 GRKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSG 269
R VF M+ R+VI+W +ISG +N + L +F M ++ + T +S + C
Sbjct: 171 ARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGH 230
Query: 270 LQALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVI 329
L+ L GR +H ++ + L + +++AL++MY KCG +++A +F+ E D ++ T +
Sbjct: 231 LKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCM 290
Query: 330 LVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDF 389
+ G+ ++G E A++L M G+ + +++++ V G + GK +H ++
Sbjct: 291 INGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQV 350
Query: 390 TSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEE 449
S+ + LI+MY+KC ++ +VFS + ++ W+++IA ++ AL L++
Sbjct: 351 YSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKR 410
Query: 450 MKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAG 509
M+ E VEP T SLL A + + + + M +T+ +S + +V + + G
Sbjct: 411 MRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSS-LDAATGLVHVYSKCG 469
Query: 510 LLIEARSF---IERMPVKPDVLVWQALLGACSIHGD 542
L A I+ DV++W AL+ +HGD
Sbjct: 470 TLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGD 505
Score = 79.3 bits (194), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 129/283 (45%), Gaps = 20/283 (7%)
Query: 40 VLDNYVDISRLLSISAKEGHFHLGPSLHASFIKTFEPFDNQNVYNVPNATVIWNSLLSFY 99
V N V I+ L+S+ + G LH ++ Q VY+ +I SL+S Y
Sbjct: 315 VRPNAVTIASLVSVCGDALKVNDGKCLHGWAVR-------QQVYS---DIIIETSLISMY 364
Query: 100 LKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASF 159
KC ++ ++F T W+ +++G ++N G FKR + + + A+
Sbjct: 365 AKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKR-MRREDVEPNIATL 423
Query: 160 TIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFG---- 215
+L A + IHC + G+ + L+ Y KCG+ S K+F
Sbjct: 424 NSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQE 483
Query: 216 EMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCE 275
+ + ++V+ W A+ISG + L++F++M + PN +T+ S++ ACS + E
Sbjct: 484 KHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEE 543
Query: 276 GRQIHGIL---WKLALQSDLCIESALMDMYSKCGSVEDAWQIF 315
G + + +K +S+ + ++D+ + G +++A+ +
Sbjct: 544 GLTLFRFMLEHYKTLARSNH--YTCIVDLLGRAGRLDEAYNLI 584
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 330 bits (845), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 184/549 (33%), Positives = 303/549 (55%), Gaps = 7/549 (1%)
Query: 91 IWNSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELG 150
+ NSL+S Y+K +A K+F++MP RD VSWN+M+SG+L G+ FK L+ G
Sbjct: 167 VCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCG 226
Query: 151 FYQLDQASFTIILSACDRSELSLVSKMIHCLVYLCGYEE-EVTVGNALITSYFKCGSSSS 209
F + D+ S L AC + K IHC E +V V +++ Y K G S
Sbjct: 227 F-KPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSY 285
Query: 210 GRKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKM-HLGLINPNSLTYLSSVMACS 268
++F M RN++ W +I +N + F KM + P+ +T ++ + A
Sbjct: 286 AERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA-- 343
Query: 269 GLQALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTV 328
A+ EGR IHG + + +E+AL+DMY +CG ++ A IF+ E + +S
Sbjct: 344 --SAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNS 401
Query: 329 ILVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSD 388
I+ + QNG A++LF ++ + + D ++++L + SL G++IH+ I+KS
Sbjct: 402 IIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSR 461
Query: 389 FTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYE 448
+ SN + N L++MY+ CGDLED+ K F+ + ++ VSWNS+I A+A HG G ++ L+
Sbjct: 462 YWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFS 521
Query: 449 EMKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRA 508
EM V P TF SLL ACS G+V++G E+ +SM + I P EHY C++D++GR
Sbjct: 522 EMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRT 581
Query: 509 GLLIEARSFIERMPVKPDVLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDSPAPYILMA 568
G A+ F+E MP P +W +LL A H D + ++AAE++F + D+ Y+L+
Sbjct: 582 GNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLL 641
Query: 569 NIYSCSGRWKERAKAIKRMKEMGVDKETGISWIEIEKQVHSFVVDDKMHPQADTIHGVLA 628
N+Y+ +GRW++ + M+ G+ + + S +E + + H F D+ H + I+ VL
Sbjct: 642 NMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLD 701
Query: 629 ELLRLMIDE 637
+ R++ +E
Sbjct: 702 VVSRMVGEE 710
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 135/499 (27%), Positives = 256/499 (51%), Gaps = 23/499 (4%)
Query: 105 MRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFTIILS 164
M +A++LFD+M D WN M+ GF G + F+ R + G + D ++ ++
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGV-KADTFTYPFVIK 138
Query: 165 ACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVIT 224
+ K IH +V G+ +V V N+LI+ Y K G + KVF EM R++++
Sbjct: 139 SVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVS 198
Query: 225 WTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGILW 284
W ++ISG + L LF +M P+ + +S++ ACS + + G++IH
Sbjct: 199 WNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAV 258
Query: 285 KLALQS-DLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAM 343
+ +++ D+ + ++++DMYSK G V A +IF + + V+ V++ +A+NG +A
Sbjct: 259 RSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAF 318
Query: 344 QLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMY 403
F KM + + P++++++ + +++ G+ IH ++ F + + LI+MY
Sbjct: 319 LCFQKMSEQN-GLQPDVITSINLLPA--SAILEGRTIHGYAMRRGFLPHMVLETALIDMY 375
Query: 404 SKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFL 463
+CG L+ + +F RMA +N +SWNS+IAA+ ++G + ALEL++E+ + P T
Sbjct: 376 GECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIA 435
Query: 464 SLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYA------CVVDMVGRAGLLIEARSF 517
S+L A + +++G E+H ++ +++ +V M G L +AR
Sbjct: 436 SILPAYAESLSLSEG-------REIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKC 488
Query: 518 IERMPVKPDVLVWQALLGACSIHGDSEMGKYAAEKLFLAQ--PDSPAPYILMANIYSCSG 575
+ +K DV+ W +++ A ++HG + + ++ ++ P+ L+A S SG
Sbjct: 489 FNHILLK-DVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAAC-SISG 546
Query: 576 RWKERAKAIKRMK-EMGVD 593
E + + MK E G+D
Sbjct: 547 MVDEGWEYFESMKREYGID 565
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 169/352 (48%), Gaps = 10/352 (2%)
Query: 90 VIWNSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLEL 149
++ S+L Y K ++ A ++F+ M R+ V+WN M+ + RNG F F++ E
Sbjct: 268 MVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQ 327
Query: 150 GFYQLDQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSS 209
Q D + +L A L + IH G+ + + ALI Y +CG S
Sbjct: 328 NGLQPDVITSINLLPA----SAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKS 383
Query: 210 GRKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSG 269
+F M +NVI+W ++I+ VQN L+LF ++ + P+S T S + A +
Sbjct: 384 AEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAE 443
Query: 270 LQALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVI 329
+L EGR+IH + K S+ I ++L+ MY+ CG +EDA + F D VS I
Sbjct: 444 SLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSI 503
Query: 330 LVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDF 389
++ +A +GF ++ LF +M+ + + + + +++L + + G + +K ++
Sbjct: 504 IMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFE-SMKREY 562
Query: 390 TSNPFVNN--GLINMYSKCGDLEDSIKVFSRM--APRNSVSWNSMIAAFARH 437
+P + + ++++ + G+ + + M P + W S++ A H
Sbjct: 563 GIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARI-WGSLLNASRNH 613
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 129/267 (48%), Gaps = 50/267 (18%)
Query: 315 FEFAEELDGVSMTVILVGFAQNGFEEEAMQLFV--------------------------- 347
++ ++++ ++T L GFA + E+A+QLF
Sbjct: 56 YKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAV 115
Query: 348 ----KMVKAGIEID----PNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGL 399
+MV AG++ D P ++ +V G+ +SL GK+IH+++IK F S+ +V N L
Sbjct: 116 QFYSRMVFAGVKADTFTYPFVIKSVAGI----SSLEEGKKIHAMVIKLGFVSDVYVCNSL 171
Query: 400 INMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTD 459
I++Y K G D+ KVF M R+ VSWNSMI+ + G+GF +L L++EM G +P
Sbjct: 172 ISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDR 231
Query: 460 VTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEH-----YACVVDMVGRAGLLIEA 514
+ +S L ACSHV G E H + R E ++DM + G + A
Sbjct: 232 FSTMSALGACSHVYSPKMGKEI-----HCHAVRSRIETGDVMVMTSILDMYSKYGEVSYA 286
Query: 515 RSFIERMPVKPDVLVWQALLGACSIHG 541
M ++ +++ W ++G + +G
Sbjct: 287 ERIFNGM-IQRNIVAWNVMIGCYARNG 312
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 62/135 (45%), Gaps = 21/135 (15%)
Query: 32 PTSSTSKLVLDNYVDISRLLSISAKEGHFHLGPSLHASFIKTFEPFDNQNVYNVPNATVI 91
P S+T +L Y + S+S EG +HA +K+ + T+I
Sbjct: 429 PDSTTIASILPAYAE-----SLSLSEGR-----EIHAYIVKS----------RYWSNTII 468
Query: 92 WNSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGF 151
NSL+ Y C + +A K F+ + ++D VSWN+++ + +G + F +
Sbjct: 469 LNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIA-SR 527
Query: 152 YQLDQASFTIILSAC 166
++++F +L+AC
Sbjct: 528 VNPNKSTFASLLAAC 542
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 328 bits (841), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 184/554 (33%), Positives = 299/554 (53%), Gaps = 34/554 (6%)
Query: 95 LLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQL 154
L+ Y + +A K+FD++P R+ + N M+ ++ NG + G F +
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNV-RP 138
Query: 155 DQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVF 214
D +F +L AC S ++ + IH G + VGN L++ Y KCG S R V
Sbjct: 139 DHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVL 198
Query: 215 GEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALC 274
EM R+V++W +++ G QNQ +++ L++ +M I+ ++ T S + A S
Sbjct: 199 DEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTT-- 256
Query: 275 EGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFA 334
+++ + DM+ K G + VS V++ +
Sbjct: 257 -----ENVMY-------------VKDMFFKMG-------------KKSLVSWNVMIGVYM 285
Query: 335 QNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPF 394
+N EA++L+ +M G E D +++VL G ++L LGK+IH I + N
Sbjct: 286 KNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLL 345
Query: 395 VNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEG 454
+ N LI+MY+KCG LE + VF M R+ VSW +MI+A+ G G A+ L+ +++ G
Sbjct: 346 LENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSG 405
Query: 455 VEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEA 514
+ P + F++ L ACSH GL+ +G K MT+ ++I+PR EH AC+VD++GRAG + EA
Sbjct: 406 LVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEA 465
Query: 515 RSFIERMPVKPDVLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDSPAPYILMANIYSCS 574
FI+ M ++P+ VW ALLGAC +H D+++G AA+KLF P+ Y+L++NIY+ +
Sbjct: 466 YRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKA 525
Query: 575 GRWKERAKAIKRMKEMGVDKETGISWIEIEKQVHSFVVDDKMHPQADTIHGVLAELLRLM 634
GRW+E MK G+ K G S +E+ + +H+F+V D+ HPQ+D I+ L L++ M
Sbjct: 526 GRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKM 585
Query: 635 IDEGYVPNKRFILH 648
+ GYVP+ LH
Sbjct: 586 KELGYVPDSESALH 599
Score = 140 bits (352), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 169/368 (45%), Gaps = 39/368 (10%)
Query: 176 KMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVITWTAVISGLVQN 235
+ +H + L ++G L+ +Y +S RKVF E+ RNVI +I V N
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 236 QLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGILWKLALQSDLCIE 295
Y EG+K+F M + P+ T+ + ACS + GR+IHG K+ L S L +
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178
Query: 296 SALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLFVKMVKAGIE 355
+ L+ MY KCG + +A + + D VS ++VG+AQN ++A+++ +M I
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238
Query: 356 IDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLIN--MYSKCGDLEDSI 413
D ++++L P V+N MY K
Sbjct: 239 HDAGTMASLL---------------------------PAVSNTTTENVMYVK-------- 263
Query: 414 KVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHVG 473
+F +M ++ VSWN MI + ++ +A+ELY M+ +G EP V+ S+L AC
Sbjct: 264 DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTS 323
Query: 474 LVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEARSFIERMPVKPDVLVWQAL 533
++ G + + E ++ P ++DM + G L +AR E M + DV+ W A+
Sbjct: 324 ALSLGKK-IHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSR-DVVSWTAM 381
Query: 534 LGACSIHG 541
+ A G
Sbjct: 382 ISAYGFSG 389
Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 156/352 (44%), Gaps = 38/352 (10%)
Query: 91 IWNSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELG 150
+ N L+S Y KC + A + D+M RD VSWN++V G+ +N FD
Sbjct: 177 VGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDA----------- 225
Query: 151 FYQLDQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSG 210
L C E +S + L T N +
Sbjct: 226 ------------LEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYV----------- 262
Query: 211 RKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGL 270
+ +F +M +++++W +I ++N + E ++L+ +M P++++ S + AC
Sbjct: 263 KDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDT 322
Query: 271 QALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVIL 330
AL G++IHG + + L +L +E+AL+DMY+KCG +E A +FE + D VS T ++
Sbjct: 323 SALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMI 382
Query: 331 VGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFT 390
+ +G +A+ LF K+ +G+ D L L G+ L+ +
Sbjct: 383 SAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMT-DHYK 441
Query: 391 SNPFVNN--GLINMYSKCGDLEDSIKVFSRMAPR-NSVSWNSMIAAFARHGN 439
P + + ++++ + G ++++ + M+ N W +++ A H +
Sbjct: 442 ITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSD 493
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 327 bits (837), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 198/613 (32%), Positives = 320/613 (52%), Gaps = 34/613 (5%)
Query: 56 KEGHFHLGPSLHASFIKTFEPFDNQNV---YNVPNATVIWNS-------LLSFYLKCDQM 105
+EGH L P + SF+K F D + + P + ++S L++ Y C +
Sbjct: 139 REGH-ELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSV 197
Query: 106 RNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGF----YQLDQA-SFT 160
+A +F+ + +D V W +VS ++ NG F+ GF Y D A +
Sbjct: 198 DSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKAS 257
Query: 161 IILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVR 220
I L A D +K +H + Y + VG L+ Y + G S KVF EM
Sbjct: 258 IGLGAFD------FAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKN 311
Query: 221 NVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVM------ACSGLQALC 274
+V+ W+ +I+ QN E + LF++M + PN T LSS++ CSGL
Sbjct: 312 DVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFT-LSSILNGCAIGKCSGL---- 366
Query: 275 EGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFA 334
G Q+HG++ K+ D+ + +AL+D+Y+KC ++ A ++F + VS ++VG+
Sbjct: 367 -GEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYE 425
Query: 335 QNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPF 394
G +A +F + ++ + + S+ LG S+ LG Q+H L IK++
Sbjct: 426 NLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVA 485
Query: 395 VNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEG 454
V+N LI+MY+KCGD++ + VF+ M + SWN++I+ ++ HG G +AL + + MK
Sbjct: 486 VSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRD 545
Query: 455 VEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEA 514
+P +TFL +L CS+ GL+++G E +SM H I P EHY C+V ++GR+G L +A
Sbjct: 546 CKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKA 605
Query: 515 RSFIERMPVKPDVLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDSPAPYILMANIYSCS 574
IE +P +P V++W+A+L A + E + +AE++ P A Y+L++N+Y+ +
Sbjct: 606 MKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGA 665
Query: 575 GRWKERAKAIKRMKEMGVDKETGISWIEIEKQVHSFVVDDKMHPQADTIHGVLAELLRLM 634
+W A K MKEMGV KE G+SWIE + VH F V HP I+G+L L
Sbjct: 666 KQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKA 725
Query: 635 IDEGYVPNKRFIL 647
GYVP++ +L
Sbjct: 726 TRAGYVPDRNAVL 738
Score = 220 bits (561), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 138/477 (28%), Positives = 246/477 (51%), Gaps = 22/477 (4%)
Query: 93 NSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFY 152
N LL+ Y+K ++A+ LFD+MP R+ VS+ T+ G+ + + EL +
Sbjct: 88 NILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGHELNPH 147
Query: 153 QLDQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRK 212
SF + + D++E + +H + GY+ VG ALI +Y CGS S R
Sbjct: 148 VF--TSFLKLFVSLDKAE---ICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSART 202
Query: 213 VFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQA 272
VF + ++++ W ++S V+N +E+ LKL M + PN+ T+ +++ A GL A
Sbjct: 203 VFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGA 262
Query: 273 LCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVG 332
+ +HG + K D + L+ +Y++ G + DA+++F + D V + ++
Sbjct: 263 FDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIAR 322
Query: 333 FAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSN 392
F QNGF EA+ LF++M +A + + +S++L + GLG+Q+H L++K F +
Sbjct: 323 FCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLD 382
Query: 393 PFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKL 452
+V+N LI++Y+KC ++ ++K+F+ ++ +N VSWN++I + G G KA ++ E
Sbjct: 383 IYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALR 442
Query: 453 EGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACV------VDMVG 506
V T+VTF S L AC+ + ++ G+ +VH ++ + + V +DM
Sbjct: 443 NQVSVTEVTFSSALGACASLASMDLGV-------QVHGLAIKTNNAKKVAVSNSLIDMYA 495
Query: 507 RAGLLIEARSFIERMPVKPDVLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDSPAP 563
+ G + A+S M DV W AL+ S HG +G+ A L + + P
Sbjct: 496 KCGDIKFAQSVFNEMET-IDVASWNALISGYSTHG---LGRQALRILDIMKDRDCKP 548
Score = 125 bits (315), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 158/324 (48%), Gaps = 18/324 (5%)
Query: 154 LDQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKV 213
LD ++ +L C + + +K IHC + G ++ N L+ +Y K G +
Sbjct: 47 LDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106
Query: 214 FGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHL--GLINPNSLTYLSSVMACSGLQ 271
F EM RN +++ L Q ++ + L+ ++H +NP+ T +
Sbjct: 107 FDEMPERNNVSFVT----LAQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKA 162
Query: 272 ALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILV 331
+C +H + KL S+ + +AL++ YS CGSV+ A +FE D V I+
Sbjct: 163 EICP--WLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVS 220
Query: 332 GFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLG-----KQIHSLIIK 386
+ +NG+ E++++L M AG + L S+GLG K +H I+K
Sbjct: 221 CYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTAL-----KASIGLGAFDFAKGVHGQILK 275
Query: 387 SDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALEL 446
+ + +P V GL+ +Y++ GD+ D+ KVF+ M + V W+ MIA F ++G +A++L
Sbjct: 276 TCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDL 335
Query: 447 YEEMKLEGVEPTDVTFLSLLHACS 470
+ M+ V P + T S+L+ C+
Sbjct: 336 FIRMREAFVVPNEFTLSSILNGCA 359
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 326 bits (836), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 183/567 (32%), Positives = 309/567 (54%), Gaps = 34/567 (5%)
Query: 108 AVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMG-FGFFKRSLELGFYQLDQASFTIILSAC 166
A K+FD++P ++ +WNT++ + + + + F E Y +I +A
Sbjct: 83 ARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAA 142
Query: 167 DRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVITWT 226
+ S LSL + +H + +V V N+LI YF CG S KVF ++ ++V++W
Sbjct: 143 EVSSLSL-GQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWN 201
Query: 227 AVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGILWKL 286
++I+G VQ ++ L+LF KM + + +T + + AC+ ++ L GRQ+ + +
Sbjct: 202 SMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEEN 261
Query: 287 ALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFA------------ 334
+ +L + +A++DMY+KCGS+EDA ++F+ EE D V+ T +L G+A
Sbjct: 262 RVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVL 321
Query: 335 -------------------QNGFEEEAMQLFVKM-VKAGIEIDPNMVSAVLGVFGVDTSL 374
QNG EA+ +F ++ ++ ++++ + + L +L
Sbjct: 322 NSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGAL 381
Query: 375 GLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAF 434
LG+ IHS I K N V + LI+MYSKCGDLE S +VF+ + R+ W++MI
Sbjct: 382 ELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGL 441
Query: 435 ARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPR 494
A HG G +A++++ +M+ V+P VTF ++ ACSH GLV++ M + I P
Sbjct: 442 AMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPE 501
Query: 495 AEHYACVVDMVGRAGLLIEARSFIERMPVKPDVLVWQALLGACSIHGDSEMGKYAAEKLF 554
+HYAC+VD++GR+G L +A FIE MP+ P VW ALLGAC IH + + + A +L
Sbjct: 502 EKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLL 561
Query: 555 LAQPDSPAPYILMANIYSCSGRWKERAKAIKRMKEMGVDKETGISWIEIEKQVHSFVVDD 614
+P + ++L++NIY+ G+W+ ++ K M+ G+ KE G S IEI+ +H F+ D
Sbjct: 562 ELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGD 621
Query: 615 KMHPQADTIHGVLAELLRLMIDEGYVP 641
HP ++ ++G L E++ + GY P
Sbjct: 622 NAHPMSEKVYGKLHEVMEKLKSNGYEP 648
Score = 146 bits (369), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 203/433 (46%), Gaps = 63/433 (14%)
Query: 50 LLSISAKEGHFHLGPSLHASFIKTFEPFDNQNVYNVPNATVIWNSLLSFYLKCDQMRNAV 109
L+ +A+ LG SLH +K+ V + + NSL+ Y C + +A
Sbjct: 137 LIKAAAEVSSLSLGQSLHGMAVKS----------AVGSDVFVANSLIHCYFSCGDLDSAC 186
Query: 110 KLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFTIILSACDRS 169
K+F + +D VSWN+M++GF++ G D FK+ +E + + +LSAC +
Sbjct: 187 KVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKK-MESEDVKASHVTMVGVLSACAKI 245
Query: 170 ELSLVSKMIHCLVYLCGYEEE------VTVGNALITSYFKCGSSSSGRKVFGEMRVRNVI 223
+ + C Y EE +T+ NA++ Y KCGS +++F M ++ +
Sbjct: 246 RNLEFGRQV------CSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNV 299
Query: 224 TWTAVISGLVQNQLYE-------------------------------EGLKLFVKMHLGL 252
TWT ++ G ++ YE E L +F ++ L
Sbjct: 300 TWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQK 359
Query: 253 -INPNSLTYLSSVMACSGLQALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDA 311
+ N +T +S++ AC+ + AL GR IH + K ++ + + SAL+ MYSKCG +E +
Sbjct: 360 NMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKS 419
Query: 312 WQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVD 371
++F E+ D + ++ G A +G EA+ +F KM +A ++ PN V+ VF
Sbjct: 420 REVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVK--PNGVT-FTNVFCAC 476
Query: 372 TSLGLGKQIHSLI--IKSDFTSNPFVNN--GLINMYSKCGDLEDSIKVFSRMA-PRNSVS 426
+ GL + SL ++S++ P + ++++ + G LE ++K M P ++
Sbjct: 477 SHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSV 536
Query: 427 WNSMIAAFARHGN 439
W +++ A H N
Sbjct: 537 WGALLGACKIHAN 549
Score = 40.4 bits (93), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 373 SLGLGKQIHSLIIKSDFTSNPFVNNGLINM--YSKCGDLEDSIKVFSRMAPRNSVSWNSM 430
SL KQ H +I++ S+P+ + L M S LE + KVF + NS +WN++
Sbjct: 42 SLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTL 101
Query: 431 IAAFARHGNGFKALELYEEMKLEG-VEPTDVTFLSLLHACSHVGLVNKG 478
I A+A + ++ + +M E P TF L+ A + V ++ G
Sbjct: 102 IRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLG 150
>sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protein At5g13270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2
SV=1
Length = 752
Score = 326 bits (835), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 177/544 (32%), Positives = 289/544 (53%), Gaps = 2/544 (0%)
Query: 88 ATVIWNSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSL 147
+ ++ N +L Y +C + +A KLFD+M + VS TM+S + G D G F L
Sbjct: 117 SVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGML 176
Query: 148 ELGFYQLDQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSS 207
G T++ S + L + IH V G ++ ++ Y KCG
Sbjct: 177 ASGDKPPSSMYTTLLKSLVNPRALDF-GRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWL 235
Query: 208 SSGRKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMAC 267
++VF +M V+ + T ++ G Q + LKLFV + + +S + + AC
Sbjct: 236 VGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKAC 295
Query: 268 SGLQALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMT 327
+ L+ L G+QIH + KL L+S++ + + L+D Y KC S E A + F+ E + VS +
Sbjct: 296 ASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWS 355
Query: 328 VILVGFAQNGFEEEAMQLFVKMVKAGIEI-DPNMVSAVLGVFGVDTSLGLGKQIHSLIIK 386
I+ G+ Q EEA++ F + I + +++ V +G Q+H+ IK
Sbjct: 356 AIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIK 415
Query: 387 SDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALEL 446
+ + + LI MYSKCG L+D+ +VF M + V+W + I+ A +GN +AL L
Sbjct: 416 RSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRL 475
Query: 447 YEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVG 506
+E+M G++P VTF+++L ACSH GLV +G L +M + ++P +HY C++D+
Sbjct: 476 FEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYA 535
Query: 507 RAGLLIEARSFIERMPVKPDVLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDSPAPYIL 566
R+GLL EA F++ MP +PD + W+ L C H + E+G+ A E+L P+ A Y+L
Sbjct: 536 RSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVL 595
Query: 567 MANIYSCSGRWKERAKAIKRMKEMGVDKETGISWIEIEKQVHSFVVDDKMHPQADTIHGV 626
N+Y+ +G+W+E A+ +K M E + KE SWI+ + ++H F+V DK HPQ I+
Sbjct: 596 PFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEK 655
Query: 627 LAEL 630
L E
Sbjct: 656 LKEF 659
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 122/481 (25%), Positives = 212/481 (44%), Gaps = 44/481 (9%)
Query: 158 SFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEM 217
S+ + AC +++H + + V + N ++ Y +C S K+F EM
Sbjct: 85 SYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEM 144
Query: 218 RVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGR 277
N ++ T +IS + + ++ + LF M P S Y + + + +AL GR
Sbjct: 145 SELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGR 204
Query: 278 QIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNG 337
QIH + + L S+ IE+ +++MY KCG + A ++F+ V+ T ++VG+ Q G
Sbjct: 205 QIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAG 264
Query: 338 FEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNN 397
+A++LFV +V G+E D + S VL L LGKQIH+ + K S V
Sbjct: 265 RARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGT 324
Query: 398 GLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEP 457
L++ Y KC E + + F + N VSW+++I+ + + +A++ ++ ++ +
Sbjct: 325 PLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASI 384
Query: 458 TD-VTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEARS 516
+ T+ S+ ACS + N G + + I + A ++ M + G L +A
Sbjct: 385 LNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESA-LITMYSKCGCLDDANE 443
Query: 517 FIERMPVKPDVLVWQ-----------------------------------ALLGACSIHG 541
E M PD++ W A+L ACS G
Sbjct: 444 VFESMD-NPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAG 502
Query: 542 DSEMGKYAAEKLFLAQPDSPA--PYILMANIYSCSGRWKERAKAIKRMKEMGVDKETGIS 599
E GK+ + + +P Y M +IY+ SG E A+K MK M + + +S
Sbjct: 503 LVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDE---ALKFMKNMPFEPD-AMS 558
Query: 600 W 600
W
Sbjct: 559 W 559
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 134/249 (53%)
Query: 232 LVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGILWKLALQSD 291
L +++ E + +M ++ +S +Y AC L++L GR +H +
Sbjct: 58 LSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPS 117
Query: 292 LCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLFVKMVK 351
+ +++ ++ MY +C S+EDA ++F+ EL+ VS T ++ +A+ G ++A+ LF M+
Sbjct: 118 VLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLA 177
Query: 352 AGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLED 411
+G + +M + +L +L G+QIH+ +I++ SN + G++NMY KCG L
Sbjct: 178 SGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVG 237
Query: 412 SIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACSH 471
+ +VF +MA + V+ ++ + + G AL+L+ ++ EGVE F +L AC+
Sbjct: 238 AKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACAS 297
Query: 472 VGLVNKGME 480
+ +N G +
Sbjct: 298 LEELNLGKQ 306
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 324 bits (830), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 174/524 (33%), Positives = 287/524 (54%), Gaps = 32/524 (6%)
Query: 157 ASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGE 216
+++ ++ C ++ K +H + G+ + + N L+ Y KCGS RKVF E
Sbjct: 86 STYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDE 145
Query: 217 MRVRNVITWTAVISGLVQNQLYEEGLKLFVKMH-----------LGLIN----------- 254
M R++ +W +++G + L EE KLF +M G +
Sbjct: 146 MPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLY 205
Query: 255 ----------PNSLTYLSSVMACSGLQALCEGRQIHGILWKLALQSDLCIESALMDMYSK 304
PN T +V A + ++ + G++IHG + + L SD + S+LMDMY K
Sbjct: 206 SLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGK 265
Query: 305 CGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAV 364
CG +++A IF+ E D VS T ++ + ++ E LF ++V + + + V
Sbjct: 266 CGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGV 325
Query: 365 LGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNS 424
L T+ LGKQ+H + + F F ++ L++MY+KCG++E + V +
Sbjct: 326 LNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDL 385
Query: 425 VSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKS 484
VSW S+I A++G +AL+ ++ + G +P VTF+++L AC+H GLV KG+EF S
Sbjct: 386 VSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYS 445
Query: 485 MTEVHRISPRAEHYACVVDMVGRAGLLIEARSFIERMPVKPDVLVWQALLGACSIHGDSE 544
+TE HR+S ++HY C+VD++ R+G + +S I MP+KP +W ++LG CS +G+ +
Sbjct: 446 ITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNID 505
Query: 545 MGKYAAEKLFLAQPDSPAPYILMANIYSCSGRWKERAKAIKRMKEMGVDKETGISWIEIE 604
+ + AA++LF +P++P Y+ MANIY+ +G+W+E K KRM+E+GV K G SW EI+
Sbjct: 506 LAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIK 565
Query: 605 KQVHSFVVDDKMHPQADTIHGVLAELLRLMIDEGYVPNKRFILH 648
++ H F+ D HP + I L EL + M +EGYVP +LH
Sbjct: 566 RKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLH 609
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 207/438 (47%), Gaps = 46/438 (10%)
Query: 90 VIWNSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLE- 148
VIWN LL Y KC + +A K+FD+MP RD SWN MV+G+ G + F E
Sbjct: 121 VIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEK 180
Query: 149 ---------LGFYQLDQASFTIILSAC------DRSELSLVS---------------KMI 178
G+ + DQ ++L + R + VS K I
Sbjct: 181 DSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEI 240
Query: 179 HCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVITWTAVISGLVQNQLY 238
H + G + + + ++L+ Y KCG R +F ++ ++V++WT++I ++ +
Sbjct: 241 HGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRW 300
Query: 239 EEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGILWKLALQSDLCIESAL 298
EG LF ++ PN T+ + AC+ L G+Q+HG + ++ S+L
Sbjct: 301 REGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSL 360
Query: 299 MDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLFVKMVKAGIEIDP 358
+DMY+KCG++E A + + + D VS T ++ G AQNG +EA++ F ++K+G + P
Sbjct: 361 VDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTK--P 418
Query: 359 NMVSAVLGVFGVDTSLGLGKQ----IHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIK 414
+ V+ V V T GL ++ +S+ K + L+++ ++ G E
Sbjct: 419 DHVTFV-NVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKS 477
Query: 415 VFSRMAPRNS-VSWNSMIAAFARHGNGFKALELYEEMKLE--GVEPTD-VTFLSLLHACS 470
V S M + S W S++ + +GN ++L EE E +EP + VT++++ + +
Sbjct: 478 VISEMPMKPSKFLWASVLGGCSTYGN----IDLAEEAAQELFKIEPENPVTYVTMANIYA 533
Query: 471 HVGLVNKGMEFLKSMTEV 488
G + + K M E+
Sbjct: 534 AAGKWEEEGKMRKRMQEI 551
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 164/349 (46%), Gaps = 38/349 (10%)
Query: 228 VISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGILWKLA 287
I L +L E ++L + P + TY + + CS +AL EG+++H +
Sbjct: 60 AIDVLCGQKLLREAVQLLGRAK----KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSG 115
Query: 288 LQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLF- 346
+ I + L+ MY+KCGS+ DA ++F+ D S V++ G+A+ G EEA +LF
Sbjct: 116 FVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFD 175
Query: 347 ----------VKMVKAGIEID-------------------PNM--VSAVLGVFGVDTSLG 375
MV ++ D PN+ VS + +
Sbjct: 176 EMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIR 235
Query: 376 LGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFA 435
GK+IH I+++ S+ + + L++MY KCG ++++ +F ++ ++ VSW SMI +
Sbjct: 236 RGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYF 295
Query: 436 RHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRA 495
+ + L+ E+ P + TF +L+AC+ + G + MT V P +
Sbjct: 296 KSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVG-FDPYS 354
Query: 496 EHYACVVDMVGRAGLLIEARSFIERMPVKPDVLVWQALLGACSIHGDSE 544
+ +VDM + G + A+ ++ P KPD++ W +L+G C+ +G +
Sbjct: 355 FASSSLVDMYTKCGNIESAKHVVDGCP-KPDLVSWTSLIGGCAQNGQPD 402
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 324 bits (830), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 186/589 (31%), Positives = 308/589 (52%), Gaps = 32/589 (5%)
Query: 91 IWNSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELG 150
+ NSL+ FY +C ++ +A K+FD+M R+ VSW +M+ G+ R F R +
Sbjct: 171 VQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDE 230
Query: 151 FYQLDQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSG 210
+ + ++SAC + E + ++ + G E + +AL+ Y KC +
Sbjct: 231 EVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVA 290
Query: 211 RKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGL 270
+++F E N+ A+ S V+ L E L +F M + P+ ++ LS++ +CS L
Sbjct: 291 KRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQL 350
Query: 271 QALCEGRQIHGILWKLALQSDLCIESALMDMYSKC------------------------- 305
+ + G+ HG + + +S I +AL+DMY KC
Sbjct: 351 RNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIV 410
Query: 306 ------GSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLFVKM-VKAGIEIDP 358
G V+ AW+ FE E + VS I+ G Q EEA+++F M + G+ D
Sbjct: 411 AGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADG 470
Query: 359 NMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSR 418
+ ++ G +L L K I+ I K+ + + L++M+S+CGD E ++ +F+
Sbjct: 471 VTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNS 530
Query: 419 MAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKG 478
+ R+ +W + I A A GN +A+EL+++M +G++P V F+ L ACSH GLV +G
Sbjct: 531 LTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQG 590
Query: 479 MEFLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEARSFIERMPVKPDVLVWQALLGACS 538
E SM ++H +SP HY C+VD++GRAGLL EA IE MP++P+ ++W +LL AC
Sbjct: 591 KEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACR 650
Query: 539 IHGDSEMGKYAAEKLFLAQPDSPAPYILMANIYSCSGRWKERAKAIKRMKEMGVDKETGI 598
+ G+ EM YAAEK+ + P+ Y+L++N+Y+ +GRW + AK MKE G+ K G
Sbjct: 651 VQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGT 710
Query: 599 SWIEIEKQVHSFVVDDKMHPQADTIHGVLAELLRLMIDEGYVPNKRFIL 647
S I+I + H F D+ HP+ I +L E+ + G+VP+ +L
Sbjct: 711 SSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVL 759
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 214/429 (49%), Gaps = 15/429 (3%)
Query: 123 WNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFTIILSACDRSELSLVSKMIHCLV 182
+N+++ G+ +G + F R + G D+ +F LSAC +S IH L+
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISP-DKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 183 YLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVITWTAVISGLVQNQLYEEGL 242
GY +++ V N+L+ Y +CG S RKVF EM RNV++WT++I G + ++ +
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 243 KLFVKM-HLGLINPNSLTYLSSVMACSGLQALCEGRQIHGILWKLALQSDLCIESALMDM 301
LF +M + PNS+T + + AC+ L+ L G +++ + ++ + + SAL+DM
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Query: 302 YSKCGSVEDAWQIFE--FAEELDGVSMTVILVGFAQNGFEEEAMQLFVKMVKAGIEIDP- 358
Y KC +++ A ++F+ A LD + + + + G EA+ +F M+ +G+ D
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCN--AMASNYVRQGLTREALGVFNLMMDSGVRPDRI 338
Query: 359 NMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSR 418
+M+SA+ + L GK H ++++ F S + N LI+MY KC + + ++F R
Sbjct: 339 SMLSAISSCSQLRNIL-WGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDR 397
Query: 419 MAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKG 478
M+ + V+WNS++A + +G A E +E M E V++ +++ L +
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMP----EKNIVSWNTIISGLVQGSLFEEA 453
Query: 479 MEFLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEAR---SFIERMPVKPDVLVWQALLG 535
+E SM ++ + G G L A+ +IE+ ++ DV + L+
Sbjct: 454 IEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVD 513
Query: 536 ACSIHGDSE 544
S GD E
Sbjct: 514 MFSRCGDPE 522
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 155/303 (51%), Gaps = 7/303 (2%)
Query: 176 KMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSS---GRKVF-GEMRVRNVITWTAVISG 231
KM H + G + +V+ L+ + G+ S ++VF + ++I G
Sbjct: 49 KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRG 108
Query: 232 LVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALCEGRQIHGILWKLALQSD 291
+ L E + LF++M I+P+ T+ + AC+ +A G QIHG++ K+ D
Sbjct: 109 YASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKD 168
Query: 292 LCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLFVKMVK 351
L ++++L+ Y++CG ++ A ++F+ E + VS T ++ G+A+ F ++A+ LF +MV+
Sbjct: 169 LFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVR 228
Query: 352 AGIEIDPNMVS--AVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDL 409
E+ PN V+ V+ L G+++++ I S N + + L++MY KC +
Sbjct: 229 DE-EVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAI 287
Query: 410 EDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHAC 469
+ + ++F N N+M + + R G +AL ++ M GV P ++ LS + +C
Sbjct: 288 DVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSC 347
Query: 470 SHV 472
S +
Sbjct: 348 SQL 350
Score = 106 bits (265), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 114/222 (51%), Gaps = 8/222 (3%)
Query: 262 SSVMACSGLQALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVED---AWQIFEFA 318
SS+ C + L + H L K L +D+ + L+ + G+ E A ++FE +
Sbjct: 37 SSLKNCKTIDEL---KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENS 93
Query: 319 EELDGVSMTVILV-GFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLG 377
E M L+ G+A +G EA+ LF++M+ +GI D L + G G
Sbjct: 94 ESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNG 153
Query: 378 KQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARH 437
QIH LI+K + + FV N L++ Y++CG+L+ + KVF M+ RN VSW SMI +AR
Sbjct: 154 IQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR 213
Query: 438 GNGFKALELYEEM-KLEGVEPTDVTFLSLLHACSHVGLVNKG 478
A++L+ M + E V P VT + ++ AC+ + + G
Sbjct: 214 DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETG 255
Score = 95.9 bits (237), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 148/343 (43%), Gaps = 49/343 (14%)
Query: 12 SNFPFCSSLVSPFITKIIQDPTSSTSKLVLDNYVDISRLLSISAKEGHFHL-----GPSL 66
SN C+++ S ++ + + L++D+ V R+ +SA L G S
Sbjct: 300 SNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSC 359
Query: 67 HASFIKT-FEPFDNQNVYNVPNATVIWNSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNT 125
H ++ FE +DN I N+L+ Y+KC + A ++FD M + V+WN+
Sbjct: 360 HGYVLRNGFESWDN-----------ICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNS 408
Query: 126 MVSGFLRNGEFDMGFGFFKRSLEL----------GFYQ---------------------L 154
+V+G++ NGE D + F+ E G Q
Sbjct: 409 IVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNA 468
Query: 155 DQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVF 214
D + I SAC ++K I+ + G + +V +G L+ + +CG S +F
Sbjct: 469 DGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIF 528
Query: 215 GEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQALC 274
+ R+V WTA I + E ++LF M + P+ + ++ ++ ACS +
Sbjct: 529 NSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQ 588
Query: 275 EGRQIHGILWKL-ALQSDLCIESALMDMYSKCGSVEDAWQIFE 316
+G++I + KL + + ++D+ + G +E+A Q+ E
Sbjct: 589 QGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIE 631
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 323 bits (829), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 189/617 (30%), Positives = 326/617 (52%), Gaps = 25/617 (4%)
Query: 34 SSTSKLVLDNYVDISRLLSISAKEGHFHLGPSLHASFIKTFEPFDNQNVYNVPNATVIWN 93
S+TSK+ I L+S++ H +H S I +++ + T + N
Sbjct: 8 SATSKVQ-----QIKTLISVACTVNHL---KQIHVSLIN----------HHLHHDTFLVN 49
Query: 94 SLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQ 153
LL L Q + + LF + +N++++GF+ N F F + G Y
Sbjct: 50 LLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLY- 108
Query: 154 LDQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKV 213
L +F ++L AC R+ + +H LV CG+ +V +L++ Y G + K+
Sbjct: 109 LHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKL 168
Query: 214 FGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGLQAL 273
F E+ R+V+TWTA+ SG + + E + LF KM + P+S + + AC + L
Sbjct: 169 FDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDL 228
Query: 274 CEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGF 333
G I + ++ +Q + + + L+++Y+KCG +E A +F+ E D V+ + ++ G+
Sbjct: 229 DSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGY 288
Query: 334 AQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNP 393
A N F +E ++LF++M++ ++ D + L +L LG+ SLI + +F +N
Sbjct: 289 ASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNL 348
Query: 394 FVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLE 453
F+ N LI+MY+KCG + +VF M ++ V N+ I+ A++G+ + ++ + +
Sbjct: 349 FMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKL 408
Query: 454 GVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGLLIE 513
G+ P TFL LL C H GL+ G+ F +++ V+ + EHY C+VD+ GRAG+L +
Sbjct: 409 GISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDD 468
Query: 514 ARSFIERMPVKPDVLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDSPAPYILMANIYSC 573
A I MP++P+ +VW ALL C + D+++ + ++L +P + Y+ ++NIYS
Sbjct: 469 AYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSV 528
Query: 574 SGRWKERAKAIKRMKEMGVDKETGISWIEIEKQVHSFVVDDKMHPQADTIHGVLAEL--- 630
GRW E A+ M + G+ K G SWIE+E +VH F+ DDK HP +D I+ L +L
Sbjct: 529 GGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNE 588
Query: 631 LRLMIDEGYVPNKRFIL 647
+RLM G+VP F+
Sbjct: 589 MRLM---GFVPTTEFVF 602
>sp|Q9ZUT5|PP191_ARATH Pentatricopeptide repeat-containing protein At2g37310
OS=Arabidopsis thaliana GN=PCMP-E49 PE=2 SV=1
Length = 657
Score = 323 bits (828), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 186/604 (30%), Positives = 316/604 (52%), Gaps = 40/604 (6%)
Query: 82 VYNVPNATVIWNSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFG 141
V+++ + + L+SFY + D+ R A+ +FD++ +R+ S+N ++ + + F
Sbjct: 50 VFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFS 109
Query: 142 FFKRSLELGFYQLDQA---SFTI-----ILSACDRSELSLVSKMIHCLVYLCGYEEEVTV 193
F + Y D A S +I LS CD L +++ +H V G++ +V V
Sbjct: 110 LFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFV 169
Query: 194 GNALITSYFKCGSSSSGRKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKM-HLGL 252
GN +IT Y KC + S RKVF EM R+V++W ++ISG Q+ +E+ K++ M
Sbjct: 170 GNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSD 229
Query: 253 INPNSLTYLSSVMACSGLQALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAW 312
PN +T +S AC L G ++H + + +Q DL + +A++ Y+KCGS++ A
Sbjct: 230 FKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYAR 289
Query: 313 QIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLFVKMVKAGIEI---------------- 356
+F+ E D V+ I+ G+ +G +EAM LF +M G+
Sbjct: 290 ALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEE 349
Query: 357 -------------DPNMV--SAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLIN 401
PN V S++L ++L GK+IH+ I++ +N +V +I+
Sbjct: 350 VINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIID 409
Query: 402 MYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVT 461
Y+K G L + +VF R+ ++W ++I A+A HG+ A L+++M+ G +P DVT
Sbjct: 410 NYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVT 469
Query: 462 FLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGLLIEARSFIERM 521
++L A +H G + SM + I P EHYAC+V ++ RAG L +A FI +M
Sbjct: 470 LTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKM 529
Query: 522 PVKPDVLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDSPAPYILMANIYSCSGRWKERA 581
P+ P VW ALL S+ GD E+ ++A ++LF +P++ Y +MAN+Y+ +GRW+E
Sbjct: 530 PIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAE 589
Query: 582 KAIKRMKEMGVDKETGISWIEIEKQVHSFVVDDKMHPQADTIHGVLAELLRLMIDEGYVP 641
+MK +G+ K G SWIE EK + SF+ D ++ ++ ++ L+ M D+ Y+
Sbjct: 590 MVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVESMSDKEYIR 649
Query: 642 NKRF 645
+
Sbjct: 650 KQEL 653
Score = 125 bits (314), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 103/452 (22%), Positives = 209/452 (46%), Gaps = 48/452 (10%)
Query: 138 MGFGF-FKRSLE--LGFYQLDQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVG 194
M GF +R+L+ L +D ++ ++ R L L +H + + + + +
Sbjct: 1 MKLGFEIQRALQGLLNKAAVDGGAYGHLIQHFTRHRLPLHVLQLHARIVVFSIKPDNFLA 60
Query: 195 NALITSYFKCGSSSSGRKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVK------M 248
+ LI+ Y + VF E+ VRN ++ A++ ++Y + LF+
Sbjct: 61 SKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCY 120
Query: 249 HLGLINPNSLTYLSSVMACSGLQALCEG---RQIHGILWKLALQSDLCIESALMDMYSKC 305
P+S++ + A SG G RQ+HG + + SD+ + + ++ Y+KC
Sbjct: 121 SSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKC 180
Query: 306 GSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVL 365
++E A ++F+ E D VS ++ G++Q+G E+ +++ M+ A + PN V+ V+
Sbjct: 181 DNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAML-ACSDFKPNGVT-VI 238
Query: 366 GVF---GVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSRMAPR 422
VF G + L G ++H +I++ + + N +I Y+KCG L+ + +F M+ +
Sbjct: 239 SVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEK 298
Query: 423 NSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKGMEF- 481
+SV++ ++I+ + HG +A+ L+ EM+ G+ + L+ H ++N E
Sbjct: 299 DSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMI 358
Query: 482 -----------------------LKSMTEVHRISPR--AEH----YACVVDMVGRAGLLI 512
LK E+H + R A++ ++D + G L+
Sbjct: 359 RCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLL 418
Query: 513 EARSFIERMPVKPDVLVWQALLGACSIHGDSE 544
A+ + + ++ W A++ A ++HGDS+
Sbjct: 419 GAQRVFDNCKDRS-LIAWTAIITAYAVHGDSD 449
Score = 36.6 bits (83), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 11/123 (8%)
Query: 43 NYVDISRLLSISAKEGHFHLGPSLHASFIKTFEPFDNQNVYNVPNATVIWNSLLSFYLKC 102
N V +S LL + G +HA I+ DN N+Y + S++ Y K
Sbjct: 365 NTVTLSSLLPSLTYSSNLKGGKEIHAFAIRN--GADN-NIY-------VTTSIIDNYAKL 414
Query: 103 DQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFTII 162
+ A ++FD+ R ++W +++ + +G+ D F + LG + D + T +
Sbjct: 415 GFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLG-TKPDDVTLTAV 473
Query: 163 LSA 165
LSA
Sbjct: 474 LSA 476
>sp|Q9FK93|PP406_ARATH Pentatricopeptide repeat-containing protein At5g39680
OS=Arabidopsis thaliana GN=EMB2744 PE=2 SV=1
Length = 710
Score = 323 bits (828), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 185/612 (30%), Positives = 311/612 (50%), Gaps = 12/612 (1%)
Query: 32 PTSSTSKLVLDNYVDISRLLSISAKEGHFHLGPSLHASFIKTFEPFDNQNVYNVPNATVI 91
P S + +D ++ LL + A + +G S+HA I T + ++ Y +
Sbjct: 22 PKSKKTPFPIDR---LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQI------ 72
Query: 92 WNSLLSFYLKCDQMRNAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMG-FGFFKRSLELG 150
NSL++ Y+KC + A KLFD MP R+ VSW M+ G+ +N FD FK G
Sbjct: 73 -NSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGY-QNSGFDFEVLKLFKSMFFSG 130
Query: 151 FYQLDQASFTIILSACDRSELSLVSKMIHCLVYLCGYEEEVTVGNALITSYFKCGSSSSG 210
+ ++ T++ +C S K H G V N L+ Y C +
Sbjct: 131 ESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEA 190
Query: 211 RKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMHLGLINPNSLTYLSSVMACSGL 270
+V ++ ++ +++ +SG ++ ++EGL + K N+LTYLSS+ S L
Sbjct: 191 IRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNL 250
Query: 271 QALCEGRQIHGILWKLALQSDLCIESALMDMYSKCGSVEDAWQIFEFAEELDGVSMTVIL 330
+ L Q+H + + +++ AL++MY KCG V A ++F+ + T I+
Sbjct: 251 RDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIM 310
Query: 331 VGFAQNGFEEEAMQLFVKMVKAGIEIDPNMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFT 390
+ Q+ EEA+ LF KM + + + +L + L G +H L++KS +
Sbjct: 311 DAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYR 370
Query: 391 SNPFVNNGLINMYSKCGDLEDSIKVFSRMAPRNSVSWNSMIAAFARHGNGFKALELYEEM 450
++ V N L+NMY+K G +ED+ K FS M R+ V+WN+MI+ + HG G +ALE ++ M
Sbjct: 371 NHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRM 430
Query: 451 KLEGVEPTDVTFLSLLHACSHVGLVNKGMEFLKSMTEVHRISPRAEHYACVVDMVGRAGL 510
G P +TF+ +L ACSH+G V +G+ + + + + P +HY C+V ++ +AG+
Sbjct: 431 IFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGM 490
Query: 511 LIEARSFIERMPVKPDVLVWQALLGACSIHGDSEMGKYAAEKLFLAQPDSPAPYILMANI 570
+A F+ P++ DV+ W+ LL AC + + +GK AE P+ Y+L++NI
Sbjct: 491 FKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNI 550
Query: 571 YSCSGRWKERAKAIKRMKEMGVDKETGISWIEIEKQVHSFVVDDKMHPQADTIHGVLAEL 630
++ S W+ AK M GV KE G+SWI I Q H F+ +D HP+ I+ + E+
Sbjct: 551 HAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEV 610
Query: 631 LRLMIDEGYVPN 642
+ + GY P+
Sbjct: 611 MSKIKPLGYSPD 622
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 234,514,884
Number of Sequences: 539616
Number of extensions: 9597422
Number of successful extensions: 28676
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 356
Number of HSP's successfully gapped in prelim test: 78
Number of HSP's that attempted gapping in prelim test: 21319
Number of HSP's gapped (non-prelim): 2108
length of query: 648
length of database: 191,569,459
effective HSP length: 124
effective length of query: 524
effective length of database: 124,657,075
effective search space: 65320307300
effective search space used: 65320307300
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)